Query 021692
Match_columns 309
No_of_seqs 283 out of 1391
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 04:56:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021692.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021692hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF06813 Nodulin-like: Nodulin 100.0 4.7E-53 1E-57 384.5 25.5 248 15-262 1-250 (250)
2 PTZ00207 hypothetical protein; 100.0 7.6E-39 1.6E-43 322.3 26.2 258 12-271 23-304 (591)
3 TIGR00890 2A0111 Oxalate/Forma 99.8 2.5E-17 5.5E-22 153.9 22.2 180 14-200 1-182 (377)
4 KOG2504 Monocarboxylate transp 99.6 1.3E-15 2.8E-20 152.2 12.5 176 13-197 42-222 (509)
5 TIGR02332 HpaX 4-hydroxyphenyl 99.6 1.2E-14 2.5E-19 141.2 18.1 181 13-200 4-194 (412)
6 PRK11551 putative 3-hydroxyphe 99.6 1.9E-14 4.2E-19 137.9 18.9 184 10-200 8-195 (406)
7 TIGR00891 2A0112 putative sial 99.6 1.6E-14 3.5E-19 137.0 18.0 182 9-198 4-191 (405)
8 PRK09556 uhpT sugar phosphate 99.6 1.3E-14 2.8E-19 142.9 17.5 183 15-199 27-216 (467)
9 PRK03545 putative arabinose tr 99.6 2.7E-13 5.9E-18 129.9 25.0 179 13-198 5-187 (390)
10 PRK09705 cynX putative cyanate 99.6 3.5E-13 7.6E-18 129.9 25.1 132 31-169 24-156 (393)
11 PRK15034 nitrate/nitrite trans 99.6 7.1E-13 1.5E-17 130.9 25.2 143 16-161 33-179 (462)
12 PRK11663 regulatory protein Uh 99.6 1.3E-13 2.9E-18 134.4 18.7 161 32-199 39-202 (434)
13 PRK03699 putative transporter; 99.6 1.5E-12 3.2E-17 125.2 24.9 165 13-184 3-172 (394)
14 PRK10213 nepI ribonucleoside t 99.6 3E-12 6.4E-17 123.6 26.4 168 8-182 11-182 (394)
15 PRK11273 glpT sn-glycerol-3-ph 99.6 1.8E-13 4E-18 134.2 17.9 192 4-199 15-212 (452)
16 TIGR00903 2A0129 major facilit 99.5 1E-12 2.2E-17 126.2 22.6 162 32-201 7-171 (368)
17 TIGR00892 2A0113 monocarboxyla 99.5 1.5E-13 3.2E-18 135.3 16.9 178 12-197 14-195 (455)
18 COG2271 UhpC Sugar phosphate p 99.5 2.1E-13 4.6E-18 131.1 16.2 163 31-200 44-211 (448)
19 TIGR00895 2A0115 benzoate tran 99.5 2.8E-13 6E-18 127.8 16.5 180 12-198 12-195 (398)
20 TIGR00710 efflux_Bcr_CflA drug 99.5 3.8E-12 8.1E-17 120.3 23.8 160 33-199 22-184 (385)
21 PRK12307 putative sialic acid 99.5 7E-13 1.5E-17 127.9 18.6 155 9-170 10-167 (426)
22 TIGR00886 2A0108 nitrite extru 99.5 6.5E-12 1.4E-16 118.2 24.0 163 29-199 14-192 (366)
23 PRK14995 methyl viologen resis 99.5 5.9E-12 1.3E-16 125.2 24.7 151 14-171 3-157 (495)
24 TIGR00881 2A0104 phosphoglycer 99.5 5E-13 1.1E-17 125.0 14.9 162 31-199 10-175 (379)
25 TIGR00712 glpT glycerol-3-phos 99.5 1.4E-12 2.9E-17 127.4 17.1 183 13-199 23-210 (438)
26 PF07690 MFS_1: Major Facilita 99.5 6.5E-12 1.4E-16 116.7 20.9 156 35-197 15-174 (352)
27 PRK03893 putative sialic acid 99.5 1.9E-12 4.2E-17 127.4 18.3 153 12-171 15-170 (496)
28 TIGR00893 2A0114 d-galactonate 99.5 4.4E-13 9.6E-18 125.3 12.9 161 32-199 10-173 (399)
29 PRK10473 multidrug efflux syst 99.5 2.7E-11 5.8E-16 115.9 25.5 162 32-200 19-183 (392)
30 PLN00028 nitrate transmembrane 99.5 1.5E-11 3.3E-16 121.8 24.3 164 29-200 49-224 (476)
31 PRK11646 multidrug resistance 99.5 3.3E-11 7.1E-16 116.6 25.0 159 16-183 13-173 (400)
32 PRK10091 MFS transport protein 99.5 3.6E-11 7.8E-16 115.1 24.8 159 32-197 19-180 (382)
33 PRK05122 major facilitator sup 99.4 1.6E-11 3.4E-16 117.7 21.9 136 35-170 35-173 (399)
34 TIGR01299 synapt_SV2 synaptic 99.4 2.8E-12 6.1E-17 133.3 17.7 181 13-201 163-360 (742)
35 PRK10054 putative transporter; 99.4 2.5E-11 5.5E-16 117.2 23.1 131 33-170 25-157 (395)
36 PRK15403 multidrug efflux syst 99.4 7.4E-11 1.6E-15 114.7 24.7 154 38-198 38-194 (413)
37 PRK12382 putative transporter; 99.4 3.8E-11 8.2E-16 114.9 22.3 133 36-168 36-171 (392)
38 TIGR00897 2A0118 polyol permea 99.4 1.4E-10 3E-15 111.9 25.8 128 38-168 35-164 (402)
39 PRK11652 emrD multidrug resist 99.4 1.1E-10 2.4E-15 111.8 24.7 180 15-201 6-189 (394)
40 TIGR00711 efflux_EmrB drug res 99.4 2.4E-11 5.1E-16 119.0 20.1 131 33-170 19-151 (485)
41 TIGR00900 2A0121 H+ Antiporter 99.4 1.1E-10 2.3E-15 108.8 23.5 157 40-199 23-182 (365)
42 PRK15402 multidrug efflux syst 99.4 1.3E-10 2.8E-15 111.9 24.5 178 13-197 9-190 (406)
43 TIGR00894 2A0114euk Na(+)-depe 99.4 1.4E-12 3.1E-17 127.8 10.9 150 45-199 70-223 (465)
44 PRK11102 bicyclomycin/multidru 99.4 9.5E-11 2.1E-15 111.0 22.9 159 34-199 9-170 (377)
45 TIGR00896 CynX cyanate transpo 99.4 2.1E-11 4.6E-16 115.1 18.2 128 33-168 17-145 (355)
46 TIGR00885 fucP L-fucose:H+ sym 99.4 7.5E-11 1.6E-15 114.8 22.4 137 29-169 15-154 (410)
47 PRK10406 alpha-ketoglutarate t 99.4 2.1E-10 4.6E-15 111.7 24.6 148 13-160 18-175 (432)
48 COG2223 NarK Nitrate/nitrite t 99.4 1.1E-10 2.5E-15 112.3 21.2 185 12-202 9-200 (417)
49 TIGR00879 SP MFS transporter, 99.4 1.2E-11 2.6E-16 119.0 14.6 159 36-199 48-220 (481)
50 TIGR00806 rfc RFC reduced fola 99.4 3.2E-11 6.9E-16 118.8 17.3 160 31-198 41-205 (511)
51 PRK11043 putative transporter; 99.4 2.6E-10 5.7E-15 109.4 23.4 140 38-184 28-170 (401)
52 PRK10207 dipeptide/tripeptide 99.3 2.7E-10 5.8E-15 113.6 24.0 147 13-165 10-163 (489)
53 TIGR00887 2A0109 phosphate:H+ 99.3 4.6E-11 1E-15 118.8 17.6 186 15-201 14-230 (502)
54 PRK10133 L-fucose transporter; 99.3 2.7E-10 5.8E-15 111.9 22.6 147 15-165 24-173 (438)
55 PRK10504 putative transporter; 99.3 1.1E-10 2.5E-15 114.4 19.6 132 32-170 26-159 (471)
56 cd06174 MFS The Major Facilita 99.3 4.9E-10 1.1E-14 103.3 22.4 132 32-170 15-148 (352)
57 PRK10077 xylE D-xylose transpo 99.3 4E-11 8.7E-16 117.4 15.9 123 40-162 36-173 (479)
58 PRK09874 drug efflux system pr 99.3 2.4E-10 5.3E-15 109.2 20.5 158 34-199 32-197 (408)
59 PRK03633 putative MFS family t 99.3 8.7E-10 1.9E-14 105.4 24.1 129 34-169 24-154 (381)
60 PRK10642 proline/glycine betai 99.3 1.5E-10 3.3E-15 114.8 18.7 140 16-162 15-171 (490)
61 PRK10642 proline/glycine betai 99.3 2.7E-10 5.9E-15 113.0 19.5 182 14-201 247-435 (490)
62 TIGR00899 2A0120 sugar efflux 99.3 2.8E-09 6E-14 100.4 25.3 159 36-201 18-182 (375)
63 PRK15462 dipeptide/tripeptide 99.3 1.7E-09 3.6E-14 108.0 24.5 150 15-170 7-163 (493)
64 PRK10489 enterobactin exporter 99.3 8.5E-10 1.8E-14 106.6 21.8 132 35-169 36-170 (417)
65 PRK09584 tppB putative tripept 99.2 3.9E-09 8.4E-14 105.5 25.7 135 30-170 35-175 (500)
66 PRK11195 lysophospholipid tran 99.2 4.2E-10 9.1E-15 108.6 17.7 141 16-168 5-147 (393)
67 COG2814 AraJ Arabinose efflux 99.2 4.4E-09 9.6E-14 101.6 24.6 165 13-185 9-178 (394)
68 TIGR00898 2A0119 cation transp 99.2 4.6E-11 9.9E-16 118.2 10.4 159 31-199 104-267 (505)
69 PRK09952 shikimate transporter 99.2 7.8E-10 1.7E-14 108.3 18.1 145 13-165 18-181 (438)
70 PRK15075 citrate-proton sympor 99.2 7.4E-10 1.6E-14 108.0 17.1 142 13-161 11-169 (434)
71 TIGR00924 yjdL_sub1_fam amino 99.2 2.1E-09 4.5E-14 106.8 20.2 126 38-170 33-166 (475)
72 PRK08633 2-acyl-glycerophospho 99.2 7.1E-09 1.5E-13 112.2 25.9 128 37-168 31-162 (1146)
73 PRK10406 alpha-ketoglutarate t 99.2 3.4E-09 7.4E-14 103.3 19.7 165 30-198 257-426 (432)
74 TIGR00901 2A0125 AmpG-related 99.1 6.3E-09 1.4E-13 98.1 20.7 127 38-169 10-143 (356)
75 KOG2532 Permease of the major 99.1 1.8E-10 3.9E-15 114.2 10.3 153 43-201 65-222 (466)
76 PRK15011 sugar efflux transpor 99.1 5E-09 1.1E-13 100.8 19.5 158 32-197 232-392 (393)
77 PRK15011 sugar efflux transpor 99.1 4.3E-08 9.3E-13 94.3 25.0 155 36-199 36-198 (393)
78 PRK09528 lacY galactoside perm 99.1 2.9E-09 6.3E-14 103.1 16.7 158 34-198 29-193 (420)
79 PRK11902 ampG muropeptide tran 99.1 8.2E-08 1.8E-12 92.5 25.7 166 28-199 10-185 (402)
80 PRK09528 lacY galactoside perm 99.1 5.7E-09 1.2E-13 101.1 17.6 160 35-201 246-409 (420)
81 PRK11551 putative 3-hydroxyphe 99.1 1E-08 2.2E-13 98.3 19.1 133 32-171 236-370 (406)
82 TIGR00889 2A0110 nucleoside tr 99.1 4.8E-09 1E-13 102.3 16.7 159 37-198 229-405 (418)
83 PRK03545 putative arabinose tr 99.1 1.5E-08 3.2E-13 97.1 19.7 154 40-200 230-385 (390)
84 TIGR00710 efflux_Bcr_CflA drug 99.1 2.2E-08 4.7E-13 94.5 20.5 133 32-166 222-356 (385)
85 TIGR00883 2A0106 metabolite-pr 99.1 2.9E-08 6.2E-13 93.3 20.6 132 32-165 9-152 (394)
86 PRK11010 ampG muropeptide tran 99.1 1.1E-07 2.4E-12 94.8 25.9 159 36-200 32-199 (491)
87 PRK10489 enterobactin exporter 99.1 1.1E-08 2.3E-13 99.0 18.2 153 37-196 244-400 (417)
88 TIGR00882 2A0105 oligosacchari 99.1 1.3E-07 2.8E-12 90.8 25.4 149 37-186 24-174 (396)
89 TIGR00897 2A0118 polyol permea 99.0 2.1E-08 4.4E-13 96.8 19.8 163 30-196 236-401 (402)
90 PRK06814 acylglycerophosphoeth 99.0 2.5E-08 5.3E-13 108.5 22.4 179 13-198 10-197 (1140)
91 PRK09952 shikimate transporter 99.0 2.7E-08 5.9E-13 97.4 20.2 163 31-197 265-434 (438)
92 TIGR00899 2A0120 sugar efflux 99.0 1.7E-08 3.6E-13 95.1 18.1 148 41-196 225-374 (375)
93 PRK15402 multidrug efflux syst 99.0 7E-08 1.5E-12 92.8 21.9 138 32-171 231-370 (406)
94 KOG1330 Sugar transporter/spin 99.0 2.1E-10 4.5E-15 111.7 4.1 180 14-201 30-215 (493)
95 COG0738 FucP Fucose permease [ 99.0 5.7E-08 1.2E-12 93.5 20.0 132 35-170 32-165 (422)
96 PRK09556 uhpT sugar phosphate 99.0 1.3E-08 2.8E-13 100.3 16.2 134 32-170 274-411 (467)
97 PRK11010 ampG muropeptide tran 99.0 4.9E-08 1.1E-12 97.3 20.0 156 38-198 245-405 (491)
98 TIGR00883 2A0106 metabolite-pr 99.0 2.3E-08 5E-13 93.9 16.6 137 29-169 232-373 (394)
99 TIGR00902 2A0127 phenyl propri 99.0 5.4E-08 1.2E-12 93.3 18.9 132 38-177 227-362 (382)
100 TIGR00805 oat sodium-independe 99.0 6.9E-09 1.5E-13 106.7 13.4 131 35-165 52-228 (633)
101 KOG3764 Vesicular amine transp 99.0 2.4E-09 5.2E-14 102.7 9.0 145 45-197 100-249 (464)
102 PRK15075 citrate-proton sympor 98.9 7.4E-08 1.6E-12 93.9 19.2 134 31-168 253-391 (434)
103 TIGR00879 SP MFS transporter, 98.9 1.8E-08 3.8E-13 96.9 14.6 137 33-170 301-444 (481)
104 PF06609 TRI12: Fungal trichot 98.9 1.3E-07 2.8E-12 96.1 21.3 191 40-241 68-271 (599)
105 TIGR00890 2A0111 Oxalate/Forma 98.9 3.3E-08 7.2E-13 92.3 15.9 128 38-170 227-356 (377)
106 PRK05122 major facilitator sup 98.9 5.7E-08 1.2E-12 93.0 17.1 154 38-201 238-394 (399)
107 cd06174 MFS The Major Facilita 98.9 5.8E-08 1.3E-12 89.4 16.1 133 32-171 191-327 (352)
108 PRK12307 putative sialic acid 98.9 8.8E-08 1.9E-12 92.4 18.0 136 30-170 245-382 (426)
109 PRK03893 putative sialic acid 98.9 9.6E-08 2.1E-12 94.1 18.0 130 36-171 295-428 (496)
110 TIGR01299 synapt_SV2 synaptic 98.9 6.8E-08 1.5E-12 100.9 17.6 114 62-182 606-721 (742)
111 TIGR00880 2_A_01_02 Multidrug 98.9 5.3E-08 1.1E-12 77.7 13.3 102 62-170 9-112 (141)
112 PRK11273 glpT sn-glycerol-3-ph 98.9 5.5E-08 1.2E-12 95.4 16.0 163 31-200 268-439 (452)
113 PRK11128 putative 3-phenylprop 98.9 5.3E-07 1.2E-11 86.3 21.8 122 40-171 28-154 (382)
114 PRK11102 bicyclomycin/multidru 98.9 4.2E-07 9.1E-12 86.0 20.9 150 41-196 220-372 (377)
115 PRK14995 methyl viologen resis 98.8 7.6E-08 1.7E-12 95.7 15.9 125 41-169 285-411 (495)
116 TIGR00902 2A0127 phenyl propri 98.8 1.4E-06 3E-11 83.5 23.8 122 39-170 27-153 (382)
117 TIGR00711 efflux_EmrB drug res 98.8 5.8E-08 1.3E-12 95.0 14.5 127 42-171 282-410 (485)
118 PRK11043 putative transporter; 98.8 4.5E-07 9.7E-12 87.0 20.3 139 30-170 217-356 (401)
119 PRK10504 putative transporter; 98.8 2.8E-07 6.2E-12 90.4 18.9 122 42-167 288-411 (471)
120 PRK15034 nitrate/nitrite trans 98.8 1.5E-07 3.2E-12 93.3 16.8 133 34-169 270-426 (462)
121 PRK10077 xylE D-xylose transpo 98.8 1.5E-07 3.2E-12 92.2 16.7 128 36-166 291-421 (479)
122 TIGR00893 2A0114 d-galactonate 98.8 2.3E-07 5E-12 86.6 17.2 134 34-171 233-373 (399)
123 PRK03699 putative transporter; 98.8 1.3E-07 2.9E-12 90.9 15.8 132 32-170 221-354 (394)
124 PLN00028 nitrate transmembrane 98.8 3.1E-07 6.7E-12 91.1 17.5 160 34-200 270-437 (476)
125 TIGR00792 gph sugar (Glycoside 98.8 1E-06 2.2E-11 85.1 20.3 161 38-199 22-198 (437)
126 TIGR00900 2A0121 H+ Antiporter 98.8 2E-07 4.4E-12 86.7 14.7 126 37-168 232-360 (365)
127 PRK09874 drug efflux system pr 98.8 8.8E-07 1.9E-11 84.6 19.4 102 62-170 269-372 (408)
128 PRK12382 putative transporter; 98.8 2.5E-07 5.3E-12 88.5 15.4 140 36-184 236-378 (392)
129 PRK11128 putative 3-phenylprop 98.7 1.1E-06 2.3E-11 84.2 18.9 127 38-171 227-355 (382)
130 PRK11902 ampG muropeptide tran 98.7 1.4E-06 3E-11 84.0 19.8 126 39-170 233-364 (402)
131 TIGR00889 2A0110 nucleoside tr 98.7 5.4E-06 1.2E-10 80.9 24.1 81 35-122 22-104 (418)
132 KOG0255 Synaptic vesicle trans 98.7 8.3E-08 1.8E-12 95.8 11.5 148 44-201 111-260 (521)
133 TIGR00882 2A0105 oligosacchari 98.7 7.7E-07 1.7E-11 85.4 17.5 141 47-194 250-394 (396)
134 TIGR00901 2A0125 AmpG-related 98.7 3.3E-07 7.2E-12 86.4 14.6 117 38-154 231-354 (356)
135 KOG0569 Permease of the major 98.7 3.2E-07 6.9E-12 91.2 14.7 158 40-201 43-210 (485)
136 KOG2563 Permease of the major 98.7 9.9E-07 2.1E-11 86.1 17.6 155 10-166 38-197 (480)
137 TIGR00887 2A0109 phosphate:H+ 98.7 3.2E-07 7E-12 91.3 14.8 136 31-170 303-453 (502)
138 PRK11663 regulatory protein Uh 98.7 8E-07 1.7E-11 86.8 17.2 158 34-196 261-425 (434)
139 PRK10213 nepI ribonucleoside t 98.7 2.3E-06 4.9E-11 82.7 20.1 131 33-171 233-366 (394)
140 PRK10473 multidrug efflux syst 98.7 3.8E-06 8.2E-11 80.3 21.1 59 41-99 229-288 (392)
141 PRK09669 putative symporter Ya 98.7 4E-06 8.7E-11 82.0 21.6 122 40-162 34-163 (444)
142 PRK09705 cynX putative cyanate 98.7 1E-06 2.2E-11 84.9 17.0 131 31-169 220-353 (393)
143 TIGR02718 sider_RhtX_FptX side 98.7 1.3E-06 2.8E-11 83.7 17.7 150 17-170 212-365 (390)
144 PRK11652 emrD multidrug resist 98.7 3.6E-06 7.8E-11 80.5 20.6 124 41-169 233-358 (394)
145 TIGR00891 2A0112 putative sial 98.7 4.5E-07 9.7E-12 85.9 14.1 125 39-170 262-389 (405)
146 COG2814 AraJ Arabinose efflux 98.7 2.3E-06 5E-11 82.9 19.0 159 29-194 225-384 (394)
147 COG2223 NarK Nitrate/nitrite t 98.7 5.8E-07 1.3E-11 86.9 14.7 143 28-170 230-374 (417)
148 TIGR00895 2A0115 benzoate tran 98.6 6.7E-07 1.4E-11 84.2 14.7 129 31-166 265-395 (398)
149 PRK08633 2-acyl-glycerophospho 98.6 1.8E-06 3.9E-11 93.7 19.2 118 38-162 255-375 (1146)
150 PRK10091 MFS transport protein 98.6 4.9E-06 1.1E-10 79.7 20.2 125 40-170 224-349 (382)
151 PRK03633 putative MFS family t 98.6 2.7E-06 5.9E-11 81.3 17.4 122 39-170 223-346 (381)
152 PF03825 Nuc_H_symport: Nucleo 98.6 7E-06 1.5E-10 80.1 19.2 177 14-198 207-398 (400)
153 TIGR01301 GPH_sucrose GPH fami 98.5 5.1E-06 1.1E-10 82.8 18.4 147 15-164 3-171 (477)
154 PRK11195 lysophospholipid tran 98.5 6.1E-06 1.3E-10 79.7 18.4 135 40-182 230-369 (393)
155 KOG0254 Predicted transporter 98.5 8.7E-07 1.9E-11 88.7 12.9 143 51-201 89-235 (513)
156 PRK10133 L-fucose transporter; 98.5 6.9E-06 1.5E-10 80.7 18.4 119 43-170 287-406 (438)
157 TIGR00892 2A0113 monocarboxyla 98.5 2.4E-06 5.2E-11 84.2 15.1 129 37-170 262-394 (455)
158 PF05977 MFS_3: Transmembrane 98.5 8.9E-06 1.9E-10 82.1 19.4 118 40-164 242-362 (524)
159 PF05977 MFS_3: Transmembrane 98.5 3.6E-05 7.8E-10 77.7 23.7 121 41-164 35-158 (524)
160 PF13347 MFS_2: MFS/sugar tran 98.5 5.3E-06 1.1E-10 80.8 17.1 158 40-197 26-200 (428)
161 COG2807 CynX Cyanate permease 98.5 7.4E-05 1.6E-09 71.5 23.6 160 17-184 11-175 (395)
162 KOG2533 Permease of the major 98.5 1.4E-06 3E-11 87.2 12.6 151 42-200 72-232 (495)
163 TIGR01272 gluP glucose/galacto 98.5 6.8E-06 1.5E-10 77.2 16.6 142 20-170 143-289 (310)
164 TIGR00898 2A0119 cation transp 98.5 3.8E-06 8.3E-11 83.1 15.6 95 67-166 372-467 (505)
165 TIGR00894 2A0114euk Na(+)-depe 98.5 5.7E-06 1.2E-10 81.2 16.6 136 31-170 276-421 (465)
166 TIGR00792 gph sugar (Glycoside 98.5 2.1E-06 4.5E-11 83.0 13.2 117 45-168 252-377 (437)
167 TIGR00712 glpT glycerol-3-phos 98.5 6.3E-06 1.4E-10 80.5 16.6 130 32-166 267-403 (438)
168 PF00083 Sugar_tr: Sugar (and 98.4 9.1E-09 2E-13 100.1 -4.0 146 52-201 47-197 (451)
169 PRK06814 acylglycerophosphoeth 98.4 9.3E-06 2E-10 88.5 18.8 130 40-169 250-394 (1140)
170 PF11700 ATG22: Vacuole efflux 98.4 2.3E-05 5.1E-10 78.2 20.0 187 6-196 272-468 (477)
171 PRK09848 glucuronide transport 98.4 2.2E-06 4.7E-11 83.9 12.5 121 42-167 255-384 (448)
172 TIGR00886 2A0108 nitrite extru 98.4 1.6E-06 3.5E-11 81.5 11.1 123 32-157 241-365 (366)
173 PRK10054 putative transporter; 98.4 1.6E-05 3.4E-10 76.8 17.6 150 45-201 238-390 (395)
174 PRK11646 multidrug resistance 98.4 9E-06 2E-10 78.7 15.9 124 38-169 230-357 (400)
175 TIGR00903 2A0129 major facilit 98.4 4.7E-05 1E-09 73.2 20.2 173 8-193 185-362 (368)
176 PF07690 MFS_1: Major Facilita 98.4 1.4E-06 3.1E-11 80.7 9.3 126 33-162 223-352 (352)
177 PRK10429 melibiose:sodium symp 98.4 6E-05 1.3E-09 74.6 21.0 121 40-161 31-159 (473)
178 KOG2615 Permease of the major 98.4 2E-05 4.4E-10 75.7 16.5 128 29-164 41-175 (451)
179 COG2270 Permeases of the major 98.3 2.2E-05 4.7E-10 76.3 16.0 156 6-169 243-400 (438)
180 PRK15403 multidrug efflux syst 98.3 6E-05 1.3E-09 73.3 19.3 192 9-206 212-409 (413)
181 KOG0569 Permease of the major 98.3 1.2E-05 2.6E-10 80.0 14.5 131 32-166 286-425 (485)
182 PRK09848 glucuronide transport 98.3 0.00016 3.4E-09 70.8 22.0 112 40-151 33-152 (448)
183 TIGR00881 2A0104 phosphoglycer 98.3 1.4E-05 3.1E-10 74.5 14.0 131 34-169 234-370 (379)
184 TIGR00788 fbt folate/biopterin 98.3 3.6E-05 7.7E-10 76.5 17.5 166 27-199 36-212 (468)
185 COG3104 PTR2 Dipeptide/tripept 98.3 7.2E-05 1.6E-09 74.1 18.8 162 30-197 39-207 (498)
186 KOG0252 Inorganic phosphate tr 98.3 9.9E-06 2.1E-10 79.4 12.2 153 48-200 81-250 (538)
187 PF01306 LacY_symp: LacY proto 98.2 1.9E-05 4.2E-10 77.1 13.5 144 49-200 257-405 (412)
188 TIGR00896 CynX cyanate transpo 98.2 3E-05 6.5E-10 73.1 14.4 132 30-169 211-346 (355)
189 PF13347 MFS_2: MFS/sugar tran 98.2 5.3E-05 1.1E-09 73.8 15.1 151 6-164 216-381 (428)
190 COG2271 UhpC Sugar phosphate p 98.1 6.2E-05 1.3E-09 73.2 13.9 151 3-162 240-399 (448)
191 TIGR02718 sider_RhtX_FptX side 98.1 0.00082 1.8E-08 64.3 21.8 167 27-197 11-185 (390)
192 TIGR02332 HpaX 4-hydroxyphenyl 98.1 6.7E-05 1.4E-09 72.9 13.5 135 29-170 255-394 (412)
193 KOG2504 Monocarboxylate transp 98.0 8.6E-05 1.9E-09 74.7 14.2 155 26-185 308-466 (509)
194 PRK10207 dipeptide/tripeptide 97.9 0.0002 4.4E-09 71.6 13.8 102 65-166 324-436 (489)
195 PRK11462 putative transporter; 97.9 0.0024 5.1E-08 63.3 21.2 120 41-161 35-162 (460)
196 PF05631 DUF791: Protein of un 97.9 0.00046 9.9E-09 66.0 15.2 86 32-130 55-141 (354)
197 PRK10429 melibiose:sodium symp 97.8 0.00046 1E-08 68.3 14.6 88 49-139 264-353 (473)
198 PRK09669 putative symporter Ya 97.8 0.00053 1.2E-08 67.1 14.4 136 57-197 270-427 (444)
199 COG2211 MelB Na+/melibiose sym 97.7 0.0052 1.1E-07 61.0 20.3 159 42-201 39-213 (467)
200 KOG0253 Synaptic vesicle trans 97.7 0.0012 2.7E-08 63.6 15.1 176 15-200 76-255 (528)
201 KOG0254 Predicted transporter 97.7 0.00049 1.1E-08 69.0 13.0 165 15-182 292-470 (513)
202 TIGR00788 fbt folate/biopterin 97.7 0.00017 3.7E-09 71.6 9.1 121 44-164 281-406 (468)
203 PRK09584 tppB putative tripept 97.7 0.0024 5.3E-08 63.9 17.4 100 67-166 337-439 (500)
204 TIGR00885 fucP L-fucose:H+ sym 97.7 0.0024 5.2E-08 62.2 16.8 115 47-170 265-380 (410)
205 KOG4686 Predicted sugar transp 97.7 0.0018 3.9E-08 60.5 14.6 118 42-169 291-411 (459)
206 PF11700 ATG22: Vacuole efflux 97.6 0.028 6.1E-07 56.2 23.9 139 57-200 76-252 (477)
207 PF03092 BT1: BT1 family; Int 97.6 0.0011 2.4E-08 65.3 13.6 158 37-197 11-177 (433)
208 KOG2325 Predicted transporter/ 97.5 0.0019 4.1E-08 64.4 13.4 158 7-169 24-188 (488)
209 KOG2533 Permease of the major 97.5 0.00074 1.6E-08 67.7 10.2 136 29-171 286-430 (495)
210 PF03209 PUCC: PUCC protein; 97.4 0.028 6.1E-07 54.8 19.6 195 42-236 6-235 (403)
211 PRK11462 putative transporter; 97.3 0.014 2.9E-07 57.9 16.4 37 56-92 268-305 (460)
212 TIGR00924 yjdL_sub1_fam amino 97.2 0.018 3.9E-07 57.3 17.2 124 69-192 335-465 (475)
213 COG2211 MelB Na+/melibiose sym 97.2 0.0067 1.5E-07 60.3 13.8 129 10-143 231-366 (467)
214 PF03825 Nuc_H_symport: Nucleo 97.2 0.1 2.2E-06 51.0 21.6 52 42-93 28-81 (400)
215 COG0738 FucP Fucose permease [ 97.2 0.04 8.7E-07 53.7 18.1 153 8-171 229-384 (422)
216 PF00083 Sugar_tr: Sugar (and 97.2 1.3E-06 2.8E-11 85.0 -12.9 135 33-170 270-410 (451)
217 PF06609 TRI12: Fungal trichot 97.1 0.0039 8.4E-08 63.9 11.0 150 17-171 310-467 (599)
218 COG2270 Permeases of the major 97.0 0.23 4.9E-06 48.8 21.0 115 31-149 34-155 (438)
219 KOG0252 Inorganic phosphate tr 96.9 0.0033 7.1E-08 62.1 8.2 150 17-168 304-465 (538)
220 PF01306 LacY_symp: LacY proto 96.9 0.014 3.1E-07 57.2 12.6 50 35-84 27-77 (412)
221 PF03209 PUCC: PUCC protein; 96.9 0.078 1.7E-06 51.7 17.4 107 40-150 233-342 (403)
222 TIGR00926 2A1704 Peptide:H+ sy 96.9 0.039 8.5E-07 57.4 16.4 129 37-165 9-144 (654)
223 COG0477 ProP Permeases of the 96.9 0.02 4.2E-07 50.1 12.2 120 38-162 24-149 (338)
224 KOG2532 Permease of the major 96.8 0.014 3E-07 58.3 12.0 136 31-170 273-418 (466)
225 KOG3098 Uncharacterized conser 96.8 0.04 8.7E-07 54.8 14.4 131 32-162 257-405 (461)
226 KOG0253 Synaptic vesicle trans 96.7 0.018 4E-07 55.7 11.1 90 67-165 397-490 (528)
227 KOG0255 Synaptic vesicle trans 96.6 0.12 2.7E-06 51.5 17.2 126 69-199 369-496 (521)
228 KOG4686 Predicted sugar transp 96.5 0.0038 8.2E-08 58.5 5.0 125 39-167 67-198 (459)
229 PF12832 MFS_1_like: MFS_1 lik 96.2 0.031 6.8E-07 41.7 7.5 48 42-89 26-74 (77)
230 PF06779 DUF1228: Protein of u 96.1 0.046 9.9E-07 41.8 8.2 68 32-99 8-76 (85)
231 TIGR01272 gluP glucose/galacto 96.1 0.076 1.6E-06 49.8 11.6 61 109-169 9-70 (310)
232 COG2807 CynX Cyanate permease 95.8 0.62 1.3E-05 45.1 16.1 106 27-140 219-326 (395)
233 PF05978 UNC-93: Ion channel r 95.7 0.12 2.5E-06 44.0 9.8 88 67-162 54-142 (156)
234 PRK03612 spermidine synthase; 95.5 3 6.5E-05 42.3 21.1 61 15-76 15-76 (521)
235 KOG3764 Vesicular amine transp 95.2 0.088 1.9E-06 51.4 8.1 145 19-170 274-428 (464)
236 TIGR01301 GPH_sucrose GPH fami 95.1 3.6 7.8E-05 41.3 19.9 127 67-195 322-470 (477)
237 KOG2816 Predicted transporter 95.1 0.23 4.9E-06 49.6 11.2 94 66-169 78-172 (463)
238 KOG2816 Predicted transporter 95.0 0.1 2.2E-06 52.1 8.6 120 42-169 268-390 (463)
239 PF01770 Folate_carrier: Reduc 95.0 0.59 1.3E-05 45.9 13.5 153 38-199 26-185 (412)
240 TIGR00805 oat sodium-independe 94.9 0.25 5.4E-06 51.2 11.3 68 29-96 343-415 (633)
241 KOG3762 Predicted transporter 94.0 0.29 6.3E-06 49.5 9.0 103 57-166 412-521 (618)
242 TIGR00769 AAA ADP/ATP carrier 93.8 8.1 0.00018 38.8 21.8 150 16-168 6-188 (472)
243 PRK15462 dipeptide/tripeptide 92.6 13 0.00027 37.6 18.9 113 83-195 348-478 (493)
244 KOG3098 Uncharacterized conser 92.0 3.9 8.5E-05 40.8 13.6 88 66-161 66-154 (461)
245 PTZ00207 hypothetical protein; 91.9 1.1 2.3E-05 46.2 9.9 144 16-169 355-512 (591)
246 PF03137 OATP: Organic Anion T 91.1 0.058 1.3E-06 54.8 -0.3 125 37-161 24-193 (539)
247 PF06963 FPN1: Ferroportin1 (F 91.1 3.3 7.1E-05 41.1 11.9 114 40-156 283-403 (432)
248 PF02487 CLN3: CLN3 protein; 90.8 6.9 0.00015 38.4 13.8 118 68-196 77-196 (402)
249 KOG2563 Permease of the major 90.7 2.1 4.5E-05 42.6 9.9 159 6-169 257-419 (480)
250 TIGR00806 rfc RFC reduced fola 89.6 8.7 0.00019 38.8 13.5 84 62-150 310-394 (511)
251 PRK13387 1,4-dihydroxy-2-napht 87.8 23 0.00049 33.6 14.6 58 76-146 84-143 (317)
252 PF06027 DUF914: Eukaryotic pr 86.8 30 0.00065 33.1 16.6 34 134-169 185-218 (334)
253 PF10225 DUF2215: Uncharacteri 86.4 26 0.00057 32.1 14.9 36 131-167 53-88 (249)
254 KOG2615 Permease of the major 86.3 12 0.00025 36.9 11.7 130 43-179 289-425 (451)
255 PF01770 Folate_carrier: Reduc 85.4 26 0.00056 34.6 13.8 137 7-149 239-380 (412)
256 KOG3626 Organic anion transpor 81.9 12 0.00026 39.5 10.5 90 4-94 381-475 (735)
257 PRK07419 1,4-dihydroxy-2-napht 81.3 39 0.00084 31.9 12.9 21 120-146 127-148 (304)
258 KOG3762 Predicted transporter 80.8 2.3 5E-05 43.3 4.6 54 40-93 35-89 (618)
259 PF03219 TLC: TLC ATP/ADP tran 80.1 70 0.0015 32.3 15.8 84 3-89 10-98 (491)
260 PF00854 PTR2: POT family; In 71.2 76 0.0017 30.1 12.2 62 81-142 2-65 (372)
261 PF03092 BT1: BT1 family; Int 70.4 12 0.00025 36.9 6.5 119 47-167 251-376 (433)
262 KOG3574 Acetyl-CoA transporter 69.0 1.2E+02 0.0025 30.3 12.6 158 40-201 54-242 (510)
263 KOG3810 Micronutrient transpor 67.3 96 0.0021 30.4 11.5 128 17-150 235-367 (433)
264 KOG2325 Predicted transporter/ 64.1 36 0.00079 34.3 8.5 166 36-201 283-482 (488)
265 PF11947 DUF3464: Protein of u 63.6 16 0.00036 30.9 5.1 78 71-150 55-135 (153)
266 PF13000 Acatn: Acetyl-coenzym 62.4 77 0.0017 32.3 10.3 58 141-199 150-225 (544)
267 TIGR00751 menA 1,4-dihydroxy-2 62.3 1.3E+02 0.0029 27.9 14.4 16 76-91 73-88 (284)
268 TIGR02235 menA_cyano-plnt 1,4- 62.3 1.3E+02 0.0029 27.9 14.0 21 120-146 114-135 (285)
269 TIGR00880 2_A_01_02 Multidrug 61.8 68 0.0015 24.3 9.6 17 69-85 106-122 (141)
270 TIGR00939 2a57 Equilibrative N 61.6 89 0.0019 30.9 10.8 50 109-162 105-154 (437)
271 KOG3626 Organic anion transpor 58.0 42 0.00091 35.6 8.0 123 39-161 120-289 (735)
272 KOG1479 Nucleoside transporter 56.4 2.1E+02 0.0046 28.2 13.6 83 108-193 115-201 (406)
273 COG2119 Predicted membrane pro 53.7 62 0.0013 28.4 7.1 30 69-98 153-183 (190)
274 PF02487 CLN3: CLN3 protein; 53.5 72 0.0016 31.4 8.4 104 55-164 285-390 (402)
275 PF03547 Mem_trans: Membrane t 50.0 1E+02 0.0022 29.4 8.8 166 137-309 23-195 (385)
276 KOG4332 Predicted sugar transp 48.6 4.1 8.8E-05 38.4 -1.0 79 44-130 65-144 (454)
277 KOG1237 H+/oligopeptide sympor 48.2 3.3E+02 0.0071 28.1 15.0 129 12-140 32-182 (571)
278 COG1292 BetT Choline-glycine b 48.1 32 0.0007 35.0 5.1 57 246-305 480-536 (537)
279 COG3104 PTR2 Dipeptide/tripept 44.1 3.6E+02 0.0078 27.4 13.6 129 33-161 305-446 (498)
280 PF03137 OATP: Organic Anion T 42.2 8.4 0.00018 39.2 0.0 47 34-80 323-372 (539)
281 TIGR00769 AAA ADP/ATP carrier 41.6 3.3E+02 0.0071 27.4 11.2 86 4-90 253-343 (472)
282 KOG1330 Sugar transporter/spin 39.3 1.3E+02 0.0029 30.3 7.8 45 32-76 264-309 (493)
283 PF06679 DUF1180: Protein of u 39.1 59 0.0013 27.9 4.7 7 291-297 138-144 (163)
284 PF08566 Pam17: Mitochondrial 38.7 65 0.0014 27.9 4.8 53 3-55 26-81 (173)
285 PF11299 DUF3100: Protein of u 38.3 25 0.00054 31.9 2.4 86 70-159 127-220 (241)
286 TIGR00939 2a57 Equilibrative N 38.2 1.1E+02 0.0025 30.2 7.3 77 83-159 340-422 (437)
287 KOG0637 Sucrose transporter an 36.2 32 0.00068 34.6 2.9 72 27-98 40-120 (498)
288 PF03219 TLC: TLC ATP/ADP tran 35.5 4.7E+02 0.01 26.4 11.2 82 5-86 270-355 (491)
289 PLN02922 prenyltransferase 34.1 4.1E+02 0.0089 25.1 16.8 58 78-146 94-152 (315)
290 KOG3817 Uncharacterized conser 33.4 2E+02 0.0044 28.0 7.6 33 133-166 181-213 (452)
291 PF09925 DUF2157: Predicted me 32.7 2.8E+02 0.006 22.7 9.8 21 78-98 32-52 (145)
292 KOG3880 Predicted small molecu 32.1 1.2E+02 0.0025 29.4 5.8 118 69-199 81-203 (409)
293 PRK12592 putative monovalent c 31.1 2.7E+02 0.0059 22.8 7.2 25 177-203 14-38 (126)
294 COG3202 ATP/ADP translocase [E 30.1 6.1E+02 0.013 25.9 18.5 90 7-99 17-111 (509)
295 PF06570 DUF1129: Protein of u 29.9 2.8E+02 0.0061 24.3 7.7 19 232-250 170-190 (206)
296 PRK12585 putative monovalent c 29.3 79 0.0017 27.9 3.9 23 177-201 12-34 (197)
297 PF14851 FAM176: FAM176 family 28.8 1.6E+02 0.0035 25.0 5.6 26 243-268 24-49 (153)
298 PRK10591 hypothetical protein; 28.3 81 0.0017 24.4 3.4 21 216-240 17-37 (92)
299 PF15176 LRR19-TM: Leucine-ric 26.9 1.1E+02 0.0024 24.0 4.0 22 244-265 19-41 (102)
300 PF07214 DUF1418: Protein of u 26.0 2.3E+02 0.005 22.1 5.5 46 216-265 17-66 (96)
301 COG4858 Uncharacterized membra 25.1 4.8E+02 0.011 23.1 8.9 18 212-229 162-179 (226)
302 TIGR02896 spore_III_AF stage I 24.3 2.8E+02 0.0061 21.9 6.0 44 220-263 8-54 (106)
303 PF11872 DUF3392: Protein of u 24.2 3.2E+02 0.007 21.7 6.2 14 4-17 37-50 (106)
304 PRK12586 putative monovalent c 23.2 3.9E+02 0.0084 22.4 6.9 24 176-201 14-37 (145)
305 PF10066 DUF2304: Uncharacteri 22.4 69 0.0015 25.5 2.2 49 221-269 45-93 (115)
306 CHL00031 psbT photosystem II p 22.3 2E+02 0.0044 17.8 3.7 14 190-203 18-31 (33)
307 COG5336 Uncharacterized protei 22.2 1.9E+02 0.0041 23.2 4.5 13 65-77 57-69 (116)
308 COG1575 MenA 1,4-dihydroxy-2-n 21.9 6.9E+02 0.015 23.7 15.2 24 136-159 139-163 (303)
309 PLN03151 cation/calcium exchan 21.6 9.6E+02 0.021 25.2 11.6 23 245-267 271-293 (650)
310 PF14143 YrhC: YrhC-like prote 20.5 2.8E+02 0.006 20.5 4.8 47 210-259 11-57 (72)
No 1
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=100.00 E-value=4.7e-53 Score=384.54 Aligned_cols=248 Identities=46% Similarity=0.937 Sum_probs=239.4
Q ss_pred hHHHHHHHHHHHHHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhhhhhhhhhccccchHHHHHHHHHHHHHHH
Q 021692 15 RWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSVGFLAGSLCEVLPIWGALLVGALQNFIGY 94 (309)
Q Consensus 15 rw~~l~~~~l~~~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~~~~~G~L~Dr~Gpr~vllig~~l~~~gy 94 (309)
||..+++++|+|.++|+.|.|++|+|++|+++|+||+|++++++++++|.++|+++|.++||+|||.++++|+++.++||
T Consensus 1 rW~~l~a~~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G~~~G~l~d~~gp~~~l~iG~~~~~~GY 80 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFGILAGLLYDRFGPWVVLLIGAVLGFVGY 80 (250)
T ss_pred ChhhHHHHHHHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhccHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHccCChH
Q 021692 95 GWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHA 174 (309)
Q Consensus 95 ~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~~~~ 174 (309)
.++|++++++++++++|++|++.+++++|++++|++++++++||||++||+++|++|++.|||++++++++.+++++|.+
T Consensus 81 ~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~ 160 (250)
T PF06813_consen 81 GLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPS 160 (250)
T ss_pred HHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCCChH
Confidence 99999999999767899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCC--CCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhhhccCchhHHHHHHHHHHH
Q 021692 175 NLIFMVAVGPAMVVIALMFIIRPVGGH--RQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFV 252 (309)
Q Consensus 175 ~~~l~la~~~~~v~l~~~~~ir~~p~~--~~~~~~~~~~f~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (309)
.|++++++.+.++++++++++|++|++ ++++++|+++|...+++++++++|++++++++++.+++++.++.+++++++
T Consensus 161 ~fll~la~~~~~v~l~~~~~vr~~~~~~~~~~~~~~~~~F~~~~~i~l~la~yLl~~~i~~~~~~~s~~~~~~~~~il~l 240 (250)
T PF06813_consen 161 SFLLFLAVLPAVVCLVAMFFVRPVPPSPSRTRQPSESKRFLFFFAIALALAIYLLVISILQNFVKLSRAARVIFAVILLL 240 (250)
T ss_pred HHHHHHHHHHHHHHHHHhhheeccCCccccccCcchhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 999999999999999999999998863 455678889999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHhh
Q 021692 253 LLFIPIVIPI 262 (309)
Q Consensus 253 ll~~~~~v~~ 262 (309)
++++|++||+
T Consensus 241 lL~~Pl~i~~ 250 (250)
T PF06813_consen 241 LLLLPLAIPV 250 (250)
T ss_pred HHHhhhhccC
Confidence 9999999985
No 2
>PTZ00207 hypothetical protein; Provisional
Probab=100.00 E-value=7.6e-39 Score=322.33 Aligned_cols=258 Identities=17% Similarity=0.240 Sum_probs=225.3
Q ss_pred ccchHHHHHHHHHHHHHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhhhhhhhhhccccchHHHHHHHHHHHH
Q 021692 12 FNNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSVGFLAGSLCEVLPIWGALLVGALQNF 91 (309)
Q Consensus 12 ~~~rw~~l~~~~l~~~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~~~~~G~L~Dr~Gpr~vllig~~l~~ 91 (309)
..+||.++++++++++++|..|.|++|++++++++|+||+|++++.+.+.....+++++|+++||+|||+++++|+++.+
T Consensus 23 e~~Rw~~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~ 102 (591)
T PTZ00207 23 EPRRFALLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIFVLSMTVFC 102 (591)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999877655444556689999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHccC
Q 021692 92 IGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAP 171 (309)
Q Consensus 92 ~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~ 171 (309)
+|++++++++++.+. +++|.++++.++.|+|.++.++++..++.+|||++||+++|+.+++.|+|++++++++..++.+
T Consensus 103 iG~ll~ala~~~~i~-~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~ 181 (591)
T PTZ00207 103 LGTLLFALTFQEVIE-GSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFSD 181 (591)
T ss_pred HHHHHHHHHhccccc-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998777663 4799999999999999999999999999999999999999999999999999999999998877
Q ss_pred ChHHHHHHHHHHHHHHHHHHHhhcccCCCCCC----CCCC--C-----------------CcchhHHHHHHHHHHHHHHH
Q 021692 172 DHANLIFMVAVGPAMVVIALMFIIRPVGGHRQ----VRPS--D-----------------SSSFTFIYSVCLLLAAYLMG 228 (309)
Q Consensus 172 ~~~~~~l~la~~~~~v~l~~~~~ir~~p~~~~----~~~~--~-----------------~~~f~~~~~~~~~l~~yl~~ 228 (309)
+++.++++++++++++++++.+++|+||+++. ++++ | .+||++++++++++++||++
T Consensus 182 ~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~ 261 (591)
T PTZ00207 182 NTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPL 261 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHH
Confidence 78889999999999999999999999987632 1111 1 24899999999999999999
Q ss_pred HHhhhhhccCchhHHHHHHHHHH-HHHHHhHHHhhhhcccccCC
Q 021692 229 VMLVEDLVDLNHTVIIIFTVILF-VLLFIPIVIPIILSFFLERT 271 (309)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~-~ll~~~~~v~~~~~~~~~~~ 271 (309)
++++++|++++++.+..++++++ ++++.| ++++|.+++++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~v~~~lll~~p-~l~ip~~~~~~~~ 304 (591)
T PTZ00207 262 QGALVAYLKLGSNFKVGFAVTVIVLTVIFP-FMAFPLTTFDGKR 304 (591)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHH-HHhhhHHHhccCC
Confidence 99999999999999999999988 555555 4445555555443
No 3
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.78 E-value=2.5e-17 Score=153.95 Aligned_cols=180 Identities=19% Similarity=0.253 Sum_probs=145.5
Q ss_pred chHHHHHHHHHHHHHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHH
Q 021692 14 NRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFI 92 (309)
Q Consensus 14 ~rw~~l~~~~l~~~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~ 92 (309)
+||+.++..+....+.+..|.++.+.|++++++|+|..+.+.+.+...++..+ .++.|.+.||+|+|+++.++.++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~ 80 (377)
T TIGR00890 1 RWWYVLVGTVIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGL 80 (377)
T ss_pred CeEEEeHHHHHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHH
Confidence 35666666666667888899999999999999999999999998888888877 66999999999999999999999888
Q ss_pred HHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHccC-
Q 021692 93 GYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAP- 171 (309)
Q Consensus 93 gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~- 171 (309)
+..+..+. ++++.+.+...+.|.+.+..+........+|||++||.+.|+...+.++|..+.+++...+.+.
T Consensus 81 ~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 153 (377)
T TIGR00890 81 GFTFYAIA-------DSLAALYLTYGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVINLE 153 (377)
T ss_pred HHHHHHHH-------HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhcc
Confidence 88666542 3688888777788888888777788888999999999999999999999999888887766543
Q ss_pred ChHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 021692 172 DHANLIFMVAVGPAMVVIALMFIIRPVGG 200 (309)
Q Consensus 172 ~~~~~~l~la~~~~~v~l~~~~~ir~~p~ 200 (309)
+++..++..++..++..++...++|+||+
T Consensus 154 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 182 (377)
T TIGR00890 154 GVPAAFIYMGIIFLLVIVLGAFLIGYPPG 182 (377)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHheecCch
Confidence 45555556666666656666667776554
No 4
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.64 E-value=1.3e-15 Score=152.23 Aligned_cols=176 Identities=20% Similarity=0.301 Sum_probs=147.5
Q ss_pred cchHHHHHHHHHHH-HHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHH
Q 021692 13 NNRWLVFVAAMWIQ-SCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQN 90 (309)
Q Consensus 13 ~~rw~~l~~~~l~~-~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~ 90 (309)
...|.+.+++++++ .+.|..+.++++-+.++++++-+.+|.+++.+...-...+ +++.+.++||+|.|.+.++|+++.
T Consensus 42 G~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~ 121 (509)
T KOG2504|consen 42 GWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVA 121 (509)
T ss_pred CeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHH
Confidence 45689999998887 6789999999999999999999999988887766555555 889999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCChhHHHHHH-HHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 91 FIGYGWVWLIVTGRAPVLPLWAMCI-LIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 91 ~~gy~l~~l~~~~~i~~~s~~~l~~-~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
++|+.+-.++ +++|++++ +..+.|+|.++.+.++.+.+.+||++||+.|.|+..++.|+|..+++++...++
T Consensus 122 ~~g~~lssF~-------~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~ 194 (509)
T KOG2504|consen 122 ALGLLLSSFA-------TSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLL 194 (509)
T ss_pred HHHHHHHHHH-------hhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHH
Confidence 9998876552 36888887 556799999999999999999999999999999999999999999999999888
Q ss_pred cC--ChHHHHHHHHHHHHHHHHHHHhhccc
Q 021692 170 AP--DHANLIFMVAVGPAMVVIALMFIIRP 197 (309)
Q Consensus 170 ~~--~~~~~~l~la~~~~~v~l~~~~~ir~ 197 (309)
++ ++...+.+.++ . +-++++...+|+
T Consensus 195 ~~~G~r~~~l~~~~~-~-l~~~~~~~~~rp 222 (509)
T KOG2504|consen 195 SKYGWRGALLIFGGI-S-LNVLVAGALLRP 222 (509)
T ss_pred HHhCcHHHHHHHHHH-H-HHHHHHHHHcCC
Confidence 64 44444444333 3 445666777777
No 5
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.63 E-value=1.2e-14 Score=141.20 Aligned_cols=181 Identities=9% Similarity=-0.036 Sum_probs=135.7
Q ss_pred cchHHHHHHHHHHHHHhhh-hhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHH
Q 021692 13 NNRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQN 90 (309)
Q Consensus 13 ~~rw~~l~~~~l~~~~~g~-~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~ 90 (309)
+.||+.+....+...+... .+..+...|.+++++|+|+.|.+++.+...++..+ +++.|++.||+|||+++.++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 3467666555555444443 55667777899999999999999998888888777 679999999999999999999998
Q ss_pred HHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 91 FIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 91 ~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
.++..+..+ . ++++.+++...+.|.+.+...+.......+||| ++||.+.|+...+.++|.++.+.+...+.
T Consensus 84 ~~~~~~~~~--~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~ 156 (412)
T TIGR02332 84 GIASTATMF--A-----TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYIL 156 (412)
T ss_pred HHHHHHHHH--h-----cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888777654 2 257788888888888888877777777899999 57999999999999999888777655443
Q ss_pred c-------CChHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 021692 170 A-------PDHANLIFMVAVGPAMVVIALMFIIRPVGG 200 (309)
Q Consensus 170 ~-------~~~~~~~l~la~~~~~v~l~~~~~ir~~p~ 200 (309)
+ .+++.-++..++..+++.++..+++|++|+
T Consensus 157 ~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 157 ALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred hCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 2 134333334455555555566677787764
No 6
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.63 E-value=1.9e-14 Score=137.93 Aligned_cols=184 Identities=14% Similarity=0.093 Sum_probs=138.7
Q ss_pred hhccchHHHHHHHHHHHHHhhh-hhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHH
Q 021692 10 SFFNNRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGA 87 (309)
Q Consensus 10 ~~~~~rw~~l~~~~l~~~~~g~-~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~ 87 (309)
+..+++|..+....++....+. .+.++...|.+++++|+|..+.+.+.+...++..+ .++.|++.||+|+|+++.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 87 (406)
T PRK11551 8 ASSSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSV 87 (406)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence 4456899988888888766554 67788888999999999999999998888888777 569999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHH
Q 021692 88 LQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYT 166 (309)
Q Consensus 88 ~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~ 166 (309)
++..++..+..+ . ++++.+.+...+.|.+.+...+.....+.++|| ++||.+.|+...+..+|+.+.+.+..
T Consensus 88 ~~~~~~~~~~~~--~-----~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 160 (406)
T PRK11551 88 ALFGLFSLATAQ--A-----WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGV 160 (406)
T ss_pred HHHHHHHHHHHH--h-----ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887777655433 2 257777777788888888888788888899998 67999999998888888887766544
Q ss_pred HHccC-ChHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 021692 167 MIHAP-DHANLIFMVAVGPAMVVIALMFIIRPVGG 200 (309)
Q Consensus 167 ~~~~~-~~~~~~l~la~~~~~v~l~~~~~ir~~p~ 200 (309)
...+. +++..++..++...+..++...+++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 195 (406)
T PRK11551 161 LAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRA 195 (406)
T ss_pred HHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChh
Confidence 33333 34433334444444444444556676554
No 7
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.63 E-value=1.6e-14 Score=136.97 Aligned_cols=182 Identities=14% Similarity=0.115 Sum_probs=136.6
Q ss_pred hhhccchHHHHHHHHHHHHHhhh-hhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHH
Q 021692 9 VSFFNNRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVG 86 (309)
Q Consensus 9 k~~~~~rw~~l~~~~l~~~~~g~-~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig 86 (309)
++..+++|+.+.+..+.....+. .+.++...+.+++++|+|..+.+.+.+...++..+ +++.|++.||+|+|+++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~ 83 (405)
T TIGR00891 4 RHLTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTS 83 (405)
T ss_pred CcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 34456888887777777766554 66778888999999999999999988877777776 67999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHH
Q 021692 87 ALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVY 165 (309)
Q Consensus 87 ~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~ 165 (309)
.++..++..+..+ . ++++.+++...+.|.+.+..+........+++| ++|+.+.|+...+.++|..+.+.+.
T Consensus 84 ~~~~~~~~~~~~~--~-----~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~ 156 (405)
T TIGR00891 84 IVLFSAGTLACGF--A-----PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVY 156 (405)
T ss_pred HHHHHHHHHHHHH--h-----ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9888877666543 1 268888888888888888888888888899999 6799999999999889988887766
Q ss_pred HHHccC---ChHHHHHHHHHHHHHHHHHHHhhcccC
Q 021692 166 TMIHAP---DHANLIFMVAVGPAMVVIALMFIIRPV 198 (309)
Q Consensus 166 ~~~~~~---~~~~~~l~la~~~~~v~l~~~~~ir~~ 198 (309)
..+.+. .++..+ .++.++.+++++....++++
T Consensus 157 ~~l~~~~~~~w~~~f-~~~~~~~~~~~~~~~~~~~~ 191 (405)
T TIGR00891 157 SLVVPVWGDGWRALF-FISILPIIFALWLRKNIPEA 191 (405)
T ss_pred HHHHHhcCccHHHHH-HHHHHHHHHHHHHHHhCCCC
Confidence 554432 233333 33444444444433444443
No 8
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.62 E-value=1.3e-14 Score=142.85 Aligned_cols=183 Identities=11% Similarity=-0.016 Sum_probs=134.4
Q ss_pred hHHHHHHHHHHHHH-hhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHH
Q 021692 15 RWLVFVAAMWIQSC-AGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFI 92 (309)
Q Consensus 15 rw~~l~~~~l~~~~-~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~ 92 (309)
+|.++...++.... ......+++..|.+++++|+|..|.+++.+...++..+ .++.|++.||+|+|+++.++.+..++
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 106 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAI 106 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHH
Confidence 44444433333332 22355677888999999999999999998888887777 56999999999999999998888776
Q ss_pred HHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHc--
Q 021692 93 GYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH-- 169 (309)
Q Consensus 93 gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~-- 169 (309)
+..++....... +++++.+.+..++.|.+.+....+....+.+||| ++||.+.|+..+..++|+++.+.+.....
T Consensus 107 ~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~ 184 (467)
T PRK09556 107 CMLGFGASLGSG--SVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANY 184 (467)
T ss_pred HHHHHHHHHhcc--cchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHh
Confidence 665555433222 2378888888888888888877788888999999 67999999999988899988876643322
Q ss_pred --cCChHHHHHHHHHHHHHHHHHHHhhcccCC
Q 021692 170 --APDHANLIFMVAVGPAMVVIALMFIIRPVG 199 (309)
Q Consensus 170 --~~~~~~~~l~la~~~~~v~l~~~~~ir~~p 199 (309)
.++++..+.+.++..++++++..+++|+.|
T Consensus 185 ~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p 216 (467)
T PRK09556 185 FFDGHVIGMFIFPSIIALIIGFIGLRYGSDSP 216 (467)
T ss_pred hccCcchhHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 223444455566666666666666777655
No 9
>PRK03545 putative arabinose transporter; Provisional
Probab=99.61 E-value=2.7e-13 Score=129.88 Aligned_cols=179 Identities=9% Similarity=0.019 Sum_probs=126.3
Q ss_pred cchHHHHHHHHHHH-HHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHH
Q 021692 13 NNRWLVFVAAMWIQ-SCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQN 90 (309)
Q Consensus 13 ~~rw~~l~~~~l~~-~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~ 90 (309)
.++|..+..-.+++ .+....|....+.|.+++++|+|+.+.+++.+...++..+ .++.|.+.||+|+|+++.++.++.
T Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 84 (390)
T PRK03545 5 KVAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLF 84 (390)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 34565444433444 3333445555566889999999999999988877777665 668999999999999999999988
Q ss_pred HHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 91 FIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 91 ~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
.++..+..+ . +++|.+.+...+.|.+.+...+.......+++| ++||.+.|+...+.++|.++.+++...+.
T Consensus 85 ~~~~~~~~~--~-----~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~ 157 (390)
T PRK03545 85 IASHVLSAL--A-----WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIG 157 (390)
T ss_pred HHHHHHHHH--h-----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 888766544 2 368888877777787777777777778889998 67999999999999899888877765544
Q ss_pred cC-ChHHHHHHHHHHHHHHHHHHHhhcccC
Q 021692 170 AP-DHANLIFMVAVGPAMVVIALMFIIRPV 198 (309)
Q Consensus 170 ~~-~~~~~~l~la~~~~~v~l~~~~~ir~~ 198 (309)
+. +++.-+...++..++..+....+++++
T Consensus 158 ~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 158 QYLGWRTTFLAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 32 333333344544433333333444443
No 10
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.61 E-value=3.5e-13 Score=129.87 Aligned_cols=132 Identities=11% Similarity=0.040 Sum_probs=110.0
Q ss_pred hhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChh
Q 021692 31 IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (309)
Q Consensus 31 ~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s 109 (309)
..+.++...|.+++++|+|.+|.+++.+...++..+ +++.|++.||+|+|+++..+.++..++..+..+ . ++
T Consensus 24 ~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~--a-----~~ 96 (393)
T PRK09705 24 LLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMREL--Y-----PQ 96 (393)
T ss_pred hhhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHH--C-----cc
Confidence 357788899999999999999999998888887776 669999999999999999999999999877654 2 36
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 110 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
++.+.+...+.|.|.+..+........+|||++|+.+.|+..++..+|..+.+.+...+.
T Consensus 97 ~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~ 156 (393)
T PRK09705 97 SALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLV 156 (393)
T ss_pred hHHHHHHHHHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777888899999988877778888999999999999987777677776666544333
No 11
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.58 E-value=7.1e-13 Score=130.92 Aligned_cols=143 Identities=12% Similarity=0.156 Sum_probs=108.3
Q ss_pred HHHHHHHHHHH-HHhhhhhhHHhhHHHHHH-hhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHH
Q 021692 16 WLVFVAAMWIQ-SCAGIGYLFGSISPVIKS-SLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFI 92 (309)
Q Consensus 16 w~~l~~~~l~~-~~~g~~Y~fsvys~~l~~-~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~ 92 (309)
|+.+..+.+.. .+...-+.++...+.+.+ ++|+|++|.+++.+...++..+ .++.|++.||+|+|+++.++.++..+
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 46666666654 344456777777778765 7999999999887766666666 47899999999999999999999887
Q ss_pred HHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHH
Q 021692 93 GYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAIL 161 (309)
Q Consensus 93 gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~ 161 (309)
...+..+...+. .++++.+.+..++.|.+ +..+.+....+.+||| ++||++.|+..+...+|..+.
T Consensus 113 ~~~~~~~a~~~~--~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~ 179 (462)
T PRK15034 113 PCVWLGIAVQNP--NTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVM 179 (462)
T ss_pred HHHHHHHHHccc--CCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHH
Confidence 776665543322 23788888888888876 5567788888999999 569999999864444666543
No 12
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.57 E-value=1.3e-13 Score=134.42 Aligned_cols=161 Identities=16% Similarity=0.138 Sum_probs=123.2
Q ss_pred hhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhH
Q 021692 32 GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPL 110 (309)
Q Consensus 32 ~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~ 110 (309)
.+.++.+.|.+++++|+|..+.+.+.+...++..+ .++.|++.||+|+|+++.++.++..++..++.+. +++
T Consensus 39 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-------~~~ 111 (434)
T PRK11663 39 RKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFS-------SSL 111 (434)
T ss_pred hhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHH-------hHH
Confidence 45677788999999999999999998888787766 6699999999999999999999888887665442 267
Q ss_pred HHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHHHHH
Q 021692 111 WAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAMVV 188 (309)
Q Consensus 111 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~~v~ 188 (309)
+.+++...+.|.+.+..+.+....+.+||| ++||++.|+.....++|+.+.+.+...+.+. +++..++..++...+++
T Consensus 112 ~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~ 191 (434)
T PRK11663 112 WAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVG 191 (434)
T ss_pred HHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 877777667777777777777888899999 5799999999999999998887776655543 34444444455444445
Q ss_pred HHHHhhcccCC
Q 021692 189 IALMFIIRPVG 199 (309)
Q Consensus 189 l~~~~~ir~~p 199 (309)
++..+++|++|
T Consensus 192 ~~~~~~~~~~p 202 (434)
T PRK11663 192 LFLCWRLRDKP 202 (434)
T ss_pred HHHHHHcCCCH
Confidence 55555666654
No 13
>PRK03699 putative transporter; Provisional
Probab=99.56 E-value=1.5e-12 Score=125.20 Aligned_cols=165 Identities=15% Similarity=0.144 Sum_probs=125.0
Q ss_pred cchHHHHHHHHHHHHHhh-hhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHH
Q 021692 13 NNRWLVFVAAMWIQSCAG-IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQN 90 (309)
Q Consensus 13 ~~rw~~l~~~~l~~~~~g-~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~ 90 (309)
.|||+....+.+.....+ ..+.++...|++++++|+|.++.+.+.+...++..+ .++.|++.||+|+|+++.++.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~ 82 (394)
T PRK03699 3 SNRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALM 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 567777766666665554 467889999999999999999999988877787777 558999999999999999998888
Q ss_pred HHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 91 FIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 91 ~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
.++..+... . ++++.+.+...+.|.+.+...+.....+.+++| ++||.+.++..+..++|+.+.+.+...+.
T Consensus 83 ~i~~~l~~~--~-----~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 155 (394)
T PRK03699 83 ILAVAGLMF--S-----HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLL 155 (394)
T ss_pred HHHHHHHHH--c-----chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877766543 2 257777777777777777777777777889999 56999999987788888888777665554
Q ss_pred cC--ChHHHHHHHHHHH
Q 021692 170 AP--DHANLIFMVAVGP 184 (309)
Q Consensus 170 ~~--~~~~~~l~la~~~ 184 (309)
.+ +++.-+...++..
T Consensus 156 ~~~~gw~~~f~~~~~~~ 172 (394)
T PRK03699 156 ARSIEWYWVYACIGLVY 172 (394)
T ss_pred hccccHHHHHHHHHHHH
Confidence 32 3443333445443
No 14
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.55 E-value=3e-12 Score=123.65 Aligned_cols=168 Identities=9% Similarity=0.031 Sum_probs=126.6
Q ss_pred hhhhccchHHHHHHHHHHHHHhh-hhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHH
Q 021692 8 FVSFFNNRWLVFVAAMWIQSCAG-IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLV 85 (309)
Q Consensus 8 ~k~~~~~rw~~l~~~~l~~~~~g-~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vlli 85 (309)
.++..|+.|..+.....+..+.+ ..|.-.-+.|++.+++|+|.++.+...+...++..+ .++.|.+.||+|||+++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~ 90 (394)
T PRK10213 11 ADAITRPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVIL 90 (394)
T ss_pred CccchhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHH
Confidence 34456678887666655554333 455544566889999999999999887777776666 6689999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHH
Q 021692 86 GALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQV 164 (309)
Q Consensus 86 g~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i 164 (309)
+.++..++..+..+ . +++|.+.+...+.|.+.+.........+.++|| ++|+.+.|+..+..++|..+.+++
T Consensus 91 ~~~~~~~~~~~~~~--~-----~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l 163 (394)
T PRK10213 91 FAVLLTLSCLLVSF--A-----NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPL 163 (394)
T ss_pred HHHHHHHHHHHHHH--H-----ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888766543 2 268888888888888888887788888889998 679999999999888988887777
Q ss_pred HHHHccC-ChHHHHHHHHH
Q 021692 165 YTMIHAP-DHANLIFMVAV 182 (309)
Q Consensus 165 ~~~~~~~-~~~~~~l~la~ 182 (309)
...+.+. +++..+++.++
T Consensus 164 ~~~l~~~~gw~~~f~~~~~ 182 (394)
T PRK10213 164 GSFLGELIGWRNVFNAAAV 182 (394)
T ss_pred HHHHHhhcCHHHHHHHHHH
Confidence 6655443 34433334443
No 15
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.55 E-value=1.8e-13 Score=134.15 Aligned_cols=192 Identities=13% Similarity=0.158 Sum_probs=131.2
Q ss_pred hhhhhhhhccch-HHHHHHHHHHHHHhh-hhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchH
Q 021692 4 FQERFVSFFNNR-WLVFVAAMWIQSCAG-IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIW 80 (309)
Q Consensus 4 ~~~~~k~~~~~r-w~~l~~~~l~~~~~g-~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr 80 (309)
.+++.+...+++ |..+...++...... ..+.++...|.++++ |+|+.+.+.+.+...++..+ +++.|++.||+|+|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k 93 (452)
T PRK11273 15 PAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPR 93 (452)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCc
Confidence 345566555444 544433333333322 234567777888888 99999999998888887776 66999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHH
Q 021692 81 GALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGA 159 (309)
Q Consensus 81 ~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~a 159 (309)
++++++.++..++...+.+.... ..+++.+.....+.|.+.+..+.+......+||| ++||.+.|+...+.++|+.
T Consensus 94 ~~l~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 170 (452)
T PRK11273 94 VFLPAGLILAAAVMLFMGFVPWA---TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGG 170 (452)
T ss_pred hhHHHHHHHHHHHHHHHHhhhcc---cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhh
Confidence 99999998888777666543211 1246666666667777777776666777889999 6699999998888888887
Q ss_pred HHHHHHHHHc--cCChHHHHHHHHHHHHHHHHHHHhhcccCC
Q 021692 160 ILTQVYTMIH--APDHANLIFMVAVGPAMVVIALMFIIRPVG 199 (309)
Q Consensus 160 i~~~i~~~~~--~~~~~~~~l~la~~~~~v~l~~~~~ir~~p 199 (309)
+.+++..... ..+++..+++.++...++.++..+++|++|
T Consensus 171 ~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~ 212 (452)
T PRK11273 171 LPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTP 212 (452)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCH
Confidence 7766543221 224444444555555555666677777654
No 16
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.55 E-value=1e-12 Score=126.23 Aligned_cols=162 Identities=12% Similarity=0.053 Sum_probs=116.7
Q ss_pred hhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhH
Q 021692 32 GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPL 110 (309)
Q Consensus 32 ~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~ 110 (309)
-+.|+...|.+++++|+|.+|.+.+.+...++..+ .++.|++.||+|+|+++..+......+.. .. ... +++
T Consensus 7 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~-~~--~~~----~~~ 79 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAG-RL--LDP----FNY 79 (368)
T ss_pred HHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH-HH--HHh----ccH
Confidence 45667777899999999999999998877777766 66999999999988876544433333321 11 111 258
Q ss_pred HHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHHHHH
Q 021692 111 WAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAMVV 188 (309)
Q Consensus 111 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~~v~ 188 (309)
+.+.+...+.|.|.+. ..+......+||| ++||+++|+...+.++|.++.+.+...+.++ +++..++..+++.++..
T Consensus 80 ~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~ 158 (368)
T TIGR00903 80 EWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGI 158 (368)
T ss_pred HHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH
Confidence 8888888888888875 3455556689999 7799999999999999999886665544433 45544445576666666
Q ss_pred HHHHhhcccCCCC
Q 021692 189 IALMFIIRPVGGH 201 (309)
Q Consensus 189 l~~~~~ir~~p~~ 201 (309)
++..++++|+|++
T Consensus 159 ~~~~~~lp~~p~~ 171 (368)
T TIGR00903 159 ILVLAALPALPFQ 171 (368)
T ss_pred HHHHHHcCCCCCC
Confidence 6667777776644
No 17
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.55 E-value=1.5e-13 Score=135.29 Aligned_cols=178 Identities=10% Similarity=0.041 Sum_probs=127.7
Q ss_pred ccchHHHHHHHHHHHHH-hhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHH
Q 021692 12 FNNRWLVFVAAMWIQSC-AGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQ 89 (309)
Q Consensus 12 ~~~rw~~l~~~~l~~~~-~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l 89 (309)
..++|.++.++++.+.. .+..+.++.+.+++++++|+|+++.+.+.+...++..+ +++.|++.||+|+|++++++.++
T Consensus 14 ~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 93 (455)
T TIGR00892 14 GGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLL 93 (455)
T ss_pred CCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHH
Confidence 35579888887777643 34457788999999999999999999987776666555 67899999999999999999888
Q ss_pred HHHHHHHHHHHHhCCCCChhHHHHHHH-HHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHH
Q 021692 90 NFIGYGWVWLIVTGRAPVLPLWAMCIL-IFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMI 168 (309)
Q Consensus 90 ~~~gy~l~~l~~~~~i~~~s~~~l~~~-~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~ 168 (309)
..++..+... .. +++.+++. ..+.|.+.+....+....+.+|||++||.+.|+..++.++|+++.+++...+
T Consensus 94 ~~~~~~~~~~--~~-----~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l 166 (455)
T TIGR00892 94 ASLGMILASF--SS-----NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYL 166 (455)
T ss_pred HHHHHHHHHH--hh-----hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 8877665533 22 46666543 3556777776555666777899999999999999999999999888876655
Q ss_pred ccC-ChHHHHHHHHHHHHHHHHHHHhhccc
Q 021692 169 HAP-DHANLIFMVAVGPAMVVIALMFIIRP 197 (309)
Q Consensus 169 ~~~-~~~~~~l~la~~~~~v~l~~~~~ir~ 197 (309)
.+. +++.-++..++..++ +.+..+++++
T Consensus 167 ~~~~gwr~~f~~~~~~~~~-~~v~~~~~~~ 195 (455)
T TIGR00892 167 FESFGWRGSFLILGGLLLH-CCVCGALMRP 195 (455)
T ss_pred HHHhChHHHHHHHHHHHHH-HHHHHHHhCC
Confidence 442 343333344544333 3333344443
No 18
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.53 E-value=2.1e-13 Score=131.12 Aligned_cols=163 Identities=15% Similarity=0.145 Sum_probs=137.5
Q ss_pred hhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhhhh-hhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChh
Q 021692 31 IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSVGF-LAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (309)
Q Consensus 31 ~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~~~-~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s 109 (309)
.-=.|++-.|+++++.++|.+|++.+.+...+...++= +.|.++||.+||..+.+|.++.++.-.++.+. ++
T Consensus 44 ~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs-------~s 116 (448)
T COG2271 44 TRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFS-------PS 116 (448)
T ss_pred HHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhh-------hH
Confidence 34468888999999999999999999888878777754 89999999999999999999998887777652 36
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhhcCC-CCCcchhhhhhhhhhhHHHHHHHH--HHHc-cCChHHHHHHHHHHHH
Q 021692 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVY--TMIH-APDHANLIFMVAVGPA 185 (309)
Q Consensus 110 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~-~RG~avGi~~~~~GLg~ai~~~i~--~~~~-~~~~~~~~l~la~~~~ 185 (309)
++.+.++..+-|..+++...+|..++.+|||+ +||+..++-.+...+|+++.+++. ..+. +.+++.-+++-+++..
T Consensus 117 ~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiai 196 (448)
T COG2271 117 LFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAI 196 (448)
T ss_pred HHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHH
Confidence 88888888888888888888999999999995 599999998888889999999988 4443 3356555667888888
Q ss_pred HHHHHHHhhcccCCC
Q 021692 186 MVVIALMFIIRPVGG 200 (309)
Q Consensus 186 ~v~l~~~~~ir~~p~ 200 (309)
+++++..+.+||.|.
T Consensus 197 ival~~~~~~rd~Pq 211 (448)
T COG2271 197 IVALILLFLLRDRPQ 211 (448)
T ss_pred HHHHHHHHHhCCCcc
Confidence 889999999998774
No 19
>TIGR00895 2A0115 benzoate transport.
Probab=99.53 E-value=2.8e-13 Score=127.75 Aligned_cols=180 Identities=17% Similarity=0.177 Sum_probs=132.4
Q ss_pred ccchHHHHHHHHHHHHHhhh-hhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHH
Q 021692 12 FNNRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQ 89 (309)
Q Consensus 12 ~~~rw~~l~~~~l~~~~~g~-~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l 89 (309)
.+++|+.+..+.+.....+. .+.++.+.|.+.+++|+|..+.+.+.+...++..+ .++.|++.||+|+|+++.++.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 12 SRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 34566666666666655554 55667778999999999999999988877777766 56999999999999999999988
Q ss_pred HHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHH
Q 021692 90 NFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMI 168 (309)
Q Consensus 90 ~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~ 168 (309)
..++..+... . ++++.+.+...+.|.+.+..+........+++| ++|+.+.|+......+|+.+.+.+...+
T Consensus 92 ~~~~~~~~~~--~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 164 (398)
T TIGR00895 92 FSVFTLLCAL--A-----TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWL 164 (398)
T ss_pred HHHHHHHHHH--c-----cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHH
Confidence 8887766543 1 257777777778888888888888888999999 6799999999988888888877766555
Q ss_pred ccC-ChHHHHHHHHHHHHHHHHHHHhhcccC
Q 021692 169 HAP-DHANLIFMVAVGPAMVVIALMFIIRPV 198 (309)
Q Consensus 169 ~~~-~~~~~~l~la~~~~~v~l~~~~~ir~~ 198 (309)
.+. +++..+.+.++...+..++...+++++
T Consensus 165 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (398)
T TIGR00895 165 IPVFGWRSLFYVGGIAPLLLLLLLMRFLPES 195 (398)
T ss_pred hhcccceeehhhhhhHHHHHHHHHHHhCCCC
Confidence 443 333333334444444444445555554
No 20
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.52 E-value=3.8e-12 Score=120.27 Aligned_cols=160 Identities=15% Similarity=0.115 Sum_probs=118.5
Q ss_pred hhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHH
Q 021692 33 YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLW 111 (309)
Q Consensus 33 Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~ 111 (309)
..+....|.+++++|.|.++.+.+.+...++..+ .++.|++.||+|+|+++.++.++..++..+... . ++++
T Consensus 22 ~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~--~-----~~~~ 94 (385)
T TIGR00710 22 DMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLAL--S-----NNIE 94 (385)
T ss_pred HHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH--H-----ccHH
Confidence 3344455788999999999999998888887776 669999999999999999999888887766543 2 2577
Q ss_pred HHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHHHHHH
Q 021692 112 AMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAMVVI 189 (309)
Q Consensus 112 ~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~~v~l 189 (309)
.+++...+.|.+.+..+++......+++| ++||.+.|+.....++|..+.+.+...+.+. +++.-+...++...+..+
T Consensus 95 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 174 (385)
T TIGR00710 95 TLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSA 174 (385)
T ss_pred HHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 77777888888888888888888999999 5699999999988888888777665544432 343333344444433334
Q ss_pred HHHhhcccCC
Q 021692 190 ALMFIIRPVG 199 (309)
Q Consensus 190 ~~~~~ir~~p 199 (309)
+..++.++++
T Consensus 175 ~~~~~~~~~~ 184 (385)
T TIGR00710 175 LIFFILPETL 184 (385)
T ss_pred HHHHhCCCCC
Confidence 4444455443
No 21
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.52 E-value=7e-13 Score=127.94 Aligned_cols=155 Identities=17% Similarity=0.137 Sum_probs=122.0
Q ss_pred hhhccchHHHHHHHHHHHHHhhhh-hhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHH
Q 021692 9 VSFFNNRWLVFVAAMWIQSCAGIG-YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVG 86 (309)
Q Consensus 9 k~~~~~rw~~l~~~~l~~~~~g~~-Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig 86 (309)
.+..+.+|..+....+.....+.. +..+...+.+++++|+|..+.+.+.+...++..+ +++.|++.||+|+|+++.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~ 89 (426)
T PRK12307 10 SEITRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWS 89 (426)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHH
Confidence 344456676666555555666653 3444455888999999999999988888888877 66999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHH
Q 021692 87 ALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVY 165 (309)
Q Consensus 87 ~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~ 165 (309)
.++..++..+..+. .+++.+.+...+.|.|.+..++.....+.+++| ++||.+.|+...+.++|..+.+.+.
T Consensus 90 ~~~~~~~~~~~~~~-------~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~ 162 (426)
T PRK12307 90 IVAYSVGTGLSGLA-------SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFM 162 (426)
T ss_pred HHHHHHHHHHHHHH-------hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHH
Confidence 99998887765442 257888888888888888888888888899999 6699999999999999998887776
Q ss_pred HHHcc
Q 021692 166 TMIHA 170 (309)
Q Consensus 166 ~~~~~ 170 (309)
..+.+
T Consensus 163 ~~l~~ 167 (426)
T PRK12307 163 PSFAE 167 (426)
T ss_pred HHHcc
Confidence 55544
No 22
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.51 E-value=6.5e-12 Score=118.18 Aligned_cols=163 Identities=15% Similarity=0.183 Sum_probs=112.7
Q ss_pred hhhhhhHHhhHHH-HHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 021692 29 AGIGYLFGSISPV-IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAP 106 (309)
Q Consensus 29 ~g~~Y~fsvys~~-l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~ 106 (309)
....+.++.+.|. +++++|+|..+.+++.+...++..+ .++.|++.||+|+|+++.++.++..++..+..+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~------ 87 (366)
T TIGR00886 14 FSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLA------ 87 (366)
T ss_pred HHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH------
Confidence 3445667788885 8999999999999998888888777 6699999999999999999999998887776542
Q ss_pred Ch-hHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHH----HHHHHHHcc--------CC
Q 021692 107 VL-PLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAIL----TQVYTMIHA--------PD 172 (309)
Q Consensus 107 ~~-s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~----~~i~~~~~~--------~~ 172 (309)
+ +++.+.+...+.|.+.+. ..+......+|+| ++||.+.++..+...+|..+. +++...+.. ++
T Consensus 88 -~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w 165 (366)
T TIGR00886 88 -VQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAW 165 (366)
T ss_pred -hhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 2 577777666666666543 3456677889999 679999999775554555444 444443321 23
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcccCC
Q 021692 173 HANLIFMVAVGPAMVVIALMFIIRPVG 199 (309)
Q Consensus 173 ~~~~~l~la~~~~~v~l~~~~~ir~~p 199 (309)
+..|.+..++...++.++...+.++.|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (366)
T TIGR00886 166 GWAFVIVPAGILLLPALLIFFVGADTP 192 (366)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcccCC
Confidence 334423334444444444445555433
No 23
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.51 E-value=5.9e-12 Score=125.17 Aligned_cols=151 Identities=14% Similarity=0.102 Sum_probs=117.8
Q ss_pred chHHHHHHHHHHHHHhhh-hhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHH
Q 021692 14 NRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNF 91 (309)
Q Consensus 14 ~rw~~l~~~~l~~~~~g~-~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~ 91 (309)
++|..+.+.++..+.... ....++-.|++.+++|.++.+.+++.+...++... .++.|++.||+|+|++++++.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~ 82 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFG 82 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 456665555555544443 44556667999999999999999998877777655 6689999999999999999999988
Q ss_pred HHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhc-C-CCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 92 IGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNF-P-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 92 ~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~F-P-~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
++..+... . ++++.+.+...+.|.|.+...........++| | ++|+.+.|+..+..++|.++.+.+...+.
T Consensus 83 ~~~~~~~~--a-----~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~ 155 (495)
T PRK14995 83 LASLAAAF--S-----PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILL 155 (495)
T ss_pred HHHHHHHH--c-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 88776543 2 36888888888888888887777777777888 4 67999999999999898887777666555
Q ss_pred cC
Q 021692 170 AP 171 (309)
Q Consensus 170 ~~ 171 (309)
++
T Consensus 156 ~~ 157 (495)
T PRK14995 156 EH 157 (495)
T ss_pred cc
Confidence 43
No 24
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.49 E-value=5e-13 Score=125.00 Aligned_cols=162 Identities=14% Similarity=0.144 Sum_probs=124.3
Q ss_pred hhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChh
Q 021692 31 IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (309)
Q Consensus 31 ~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s 109 (309)
....++...|.+++++|+|..+.+.+.+...++..+ .++.|++.||+|+|+++.++.++..++..+..+. ++
T Consensus 10 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-------~~ 82 (379)
T TIGR00881 10 VRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS-------TS 82 (379)
T ss_pred hHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh-------hh
Confidence 355667778889999999999999998888888777 6699999999999999999999888887776542 25
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHc-c-CChHHHHHHHHHHHHH
Q 021692 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH-A-PDHANLIFMVAVGPAM 186 (309)
Q Consensus 110 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~-~-~~~~~~~l~la~~~~~ 186 (309)
+|.+.+...+.|.+.+..++.......+++| ++|+.+.|+......+|+.+.+++....+ + .+++..+...++...+
T Consensus 83 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (379)
T TIGR00881 83 LWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAII 162 (379)
T ss_pred HHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 7888888888888888888888888999999 57999999999999899988885444333 2 2333333445555555
Q ss_pred HHHHHHhhcccCC
Q 021692 187 VVIALMFIIRPVG 199 (309)
Q Consensus 187 v~l~~~~~ir~~p 199 (309)
++++..++.|++|
T Consensus 163 ~~~~~~~~~~~~~ 175 (379)
T TIGR00881 163 VSLICFLLLRDSP 175 (379)
T ss_pred HHHHHheeeCCCc
Confidence 5556666666544
No 25
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.48 E-value=1.4e-12 Score=127.41 Aligned_cols=183 Identities=16% Similarity=0.178 Sum_probs=126.1
Q ss_pred cchHHHHHHHHHHHHHhh-hhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHH
Q 021692 13 NNRWLVFVAAMWIQSCAG-IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQN 90 (309)
Q Consensus 13 ~~rw~~l~~~~l~~~~~g-~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~ 90 (309)
+.||..+...++...... ....+....|.+++ +|+|+++.+.+.+...++..+ .++.|++.||+|+|+++.++.++.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~ 101 (438)
T TIGR00712 23 RLRWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILS 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHH
Confidence 345666554444443332 23445555677776 599999999988888787776 569999999999999999998888
Q ss_pred HHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 91 FIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 91 ~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
.++..+.... ... ..+++.+++..++.|.+.+..+.+....+.++|| ++||++.|+.....++|+.+.+++.....
T Consensus 102 ~~~~~~~~~~--~~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~ 178 (438)
T TIGR00712 102 AAVMLLMGFV--PWA-TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGM 178 (438)
T ss_pred HHHHHHHhcc--ccc-cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHH
Confidence 8777665432 111 1256666666677777777777777778889998 67999999988888888888877655433
Q ss_pred c--CChHHHHHHHHHHHHHHHHHHHhhcccCC
Q 021692 170 A--PDHANLIFMVAVGPAMVVIALMFIIRPVG 199 (309)
Q Consensus 170 ~--~~~~~~~l~la~~~~~v~l~~~~~ir~~p 199 (309)
. .+++.-++..++..++..++..+++|++|
T Consensus 179 ~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~ 210 (438)
T TIGR00712 179 AWFNDWHAALYFPAICAIIVALFAFAMMRDTP 210 (438)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 2 23443344445555555556667777654
No 26
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.48 E-value=6.5e-12 Score=116.66 Aligned_cols=156 Identities=21% Similarity=0.275 Sum_probs=114.4
Q ss_pred HHhhHH-HHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHH
Q 021692 35 FGSISP-VIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWA 112 (309)
Q Consensus 35 fsvys~-~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~ 112 (309)
+....+ .+++++|+|..+.+.+.+...++..+ +++.|.+.||+|+|+++.++.++..++..+..+ .. +.|.
T Consensus 15 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~--~~-----~~~~ 87 (352)
T PF07690_consen 15 ISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF--AS-----NFWL 87 (352)
T ss_dssp HHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH--HC-----CHHH
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh--hh-----hHHH
Confidence 444445 78899999999999998888777766 679999999999999999999999888444332 22 4667
Q ss_pred HHHHHHHHHhchhhhhhhHHHHHhhhcCC-CCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHHHHHHH
Q 021692 113 MCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAMVVIA 190 (309)
Q Consensus 113 l~~~~~l~g~g~~~~~~~~~~~~~~~FP~-~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~~v~l~ 190 (309)
+.+...+.|.+.+..+.+......+++|+ +|+.+.|+.....++|..+.+.+...+.+. +++..++..++...+..++
T Consensus 88 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 88 LLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHH
T ss_pred Hhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhh
Confidence 77778888989899999999999999995 899999999999999998887666655432 3333333444444433333
Q ss_pred HHhhccc
Q 021692 191 LMFIIRP 197 (309)
Q Consensus 191 ~~~~ir~ 197 (309)
...++++
T Consensus 168 ~~~~~~~ 174 (352)
T PF07690_consen 168 FILFLPE 174 (352)
T ss_dssp HHCCC--
T ss_pred Hhhhhhh
Confidence 3344443
No 27
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.48 E-value=1.9e-12 Score=127.42 Aligned_cols=153 Identities=18% Similarity=0.194 Sum_probs=119.9
Q ss_pred ccchHHHHHHHHHHHHHhhh-hhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHH
Q 021692 12 FNNRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQ 89 (309)
Q Consensus 12 ~~~rw~~l~~~~l~~~~~g~-~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l 89 (309)
.++||+.+....+..+..+. .+..+...|.+++++|+|+.+.+.+.+...++..+ +++.|++.||+|+|+++.++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 94 (496)
T PRK03893 15 NRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVL 94 (496)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 45667766555555555554 44556667899999999999999887777777766 66999999999999999999988
Q ss_pred HHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHH
Q 021692 90 NFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMI 168 (309)
Q Consensus 90 ~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~ 168 (309)
..++..+..+. ++++.+.+...+.|.+.+..+........+++| ++||.+.|+......+|..+.+.+...+
T Consensus 95 ~~~~~~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 167 (496)
T PRK03893 95 FSVGTLACGFA-------PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLV 167 (496)
T ss_pred HHHHHHHHHHH-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887766542 267888777888888888877788888889999 6699999999888889888877776655
Q ss_pred ccC
Q 021692 169 HAP 171 (309)
Q Consensus 169 ~~~ 171 (309)
.+.
T Consensus 168 ~~~ 170 (496)
T PRK03893 168 VPV 170 (496)
T ss_pred hcc
Confidence 543
No 28
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.47 E-value=4.4e-13 Score=125.33 Aligned_cols=161 Identities=18% Similarity=0.120 Sum_probs=124.4
Q ss_pred hhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhH
Q 021692 32 GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPL 110 (309)
Q Consensus 32 ~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~ 110 (309)
.+.++...|.+++++|+|..+.+.+.+...++..+ .++.|++.||+|+|+++.++.++..++..++.+. +++
T Consensus 10 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~~ 82 (399)
T TIGR00893 10 RANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA-------GAY 82 (399)
T ss_pred HHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH-------cCH
Confidence 35566777889999999999999998888888777 6699999999999999999998888777666542 257
Q ss_pred HHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHHHHH
Q 021692 111 WAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAMVV 188 (309)
Q Consensus 111 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~~v~ 188 (309)
+.+.+...+.|.+.+...++......+++| ++||.+.|+.....++|..+.+.+...+.+. +++..+...++...+..
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 162 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWG 162 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 888888888888888888888888999999 6799999999999999998888776655543 34433334454444444
Q ss_pred HHHHhhcccCC
Q 021692 189 IALMFIIRPVG 199 (309)
Q Consensus 189 l~~~~~ir~~p 199 (309)
++..++.+++|
T Consensus 163 ~~~~~~~~~~~ 173 (399)
T TIGR00893 163 VLWLKFIPDPP 173 (399)
T ss_pred HHhhheecCCC
Confidence 44445555544
No 29
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.47 E-value=2.7e-11 Score=115.90 Aligned_cols=162 Identities=15% Similarity=0.112 Sum_probs=117.0
Q ss_pred hhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhH
Q 021692 32 GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPL 110 (309)
Q Consensus 32 ~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~ 110 (309)
.+.+..+.|.+++++|.|..+.+.+.+...++..+ .++.|++.||+|+|++++++.+...+++.+... . +++
T Consensus 19 ~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~--~-----~~~ 91 (392)
T PRK10473 19 IDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSL--A-----ETS 91 (392)
T ss_pred HHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHH--h-----CcH
Confidence 34444678999999999999999888877777766 569999999999999999999888888766543 2 246
Q ss_pred HHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHHHHH
Q 021692 111 WAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAMVV 188 (309)
Q Consensus 111 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~~v~ 188 (309)
+.+.+...+.|.+.+..+........+++| ++|+.+.|+..+...+|..+.+.+...+.+. +++..+...++...+..
T Consensus 92 ~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~ 171 (392)
T PRK10473 92 SLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVL 171 (392)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHH
Confidence 666666667777777777778888889998 7799999998877777766665554433332 34433344454444445
Q ss_pred HHHHhhcccCCC
Q 021692 189 IALMFIIRPVGG 200 (309)
Q Consensus 189 l~~~~~ir~~p~ 200 (309)
++...+++++++
T Consensus 172 ~~~~~~~~~~~~ 183 (392)
T PRK10473 172 LLSLFILKETRP 183 (392)
T ss_pred HHHHHHcCCCCC
Confidence 555566665543
No 30
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.47 E-value=1.5e-11 Score=121.76 Aligned_cols=164 Identities=16% Similarity=0.198 Sum_probs=110.3
Q ss_pred hhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 021692 29 AGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPV 107 (309)
Q Consensus 29 ~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~ 107 (309)
....|.++.+.|.+++++|+|..|.+.+.+...++..+ .++.|++.||+|+|+++.++.+...++..+..+ ..
T Consensus 49 ~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~--~~---- 122 (476)
T PLN00028 49 FVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSL--VS---- 122 (476)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH--hc----
Confidence 33467788888999999999999999887777777776 469999999999999999988888777665543 22
Q ss_pred hhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHH----HHHHHcc------CChHHH
Q 021692 108 LPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQ----VYTMIHA------PDHANL 176 (309)
Q Consensus 108 ~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~----i~~~~~~------~~~~~~ 176 (309)
+++.+.+..++.|.+.+.. .+......+||| ++||.+.|+..+...+|+++... +...+.. .+++.-
T Consensus 123 -s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~ 200 (476)
T PLN00028 123 -SATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIA 200 (476)
T ss_pred -CHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHH
Confidence 4666665556666655543 234445679999 67999999986655555554432 2222111 124333
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCC
Q 021692 177 IFMVAVGPAMVVIALMFIIRPVGG 200 (309)
Q Consensus 177 ~l~la~~~~~v~l~~~~~ir~~p~ 200 (309)
++..+++.++++++..++.|++|.
T Consensus 201 f~i~g~l~l~~~l~~~~~~~~~p~ 224 (476)
T PLN00028 201 FFVPGLLHIIMGILVLTLGQDLPD 224 (476)
T ss_pred HHHHHHHHHHHHHHHHHHcCcCCC
Confidence 445565555555555555666553
No 31
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.46 E-value=3.3e-11 Score=116.59 Aligned_cols=159 Identities=14% Similarity=0.165 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHH
Q 021692 16 WLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGY 94 (309)
Q Consensus 16 w~~l~~~~l~~~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy 94 (309)
|..+...++..... ...+++.+.++++++|+|..+.+.+.+...+...+ +++.|.+.||+|+|+++.++.++..++.
T Consensus 13 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~ 90 (400)
T PRK11646 13 YFLLIDNMLVVLGF--FVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGF 90 (400)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHH
Confidence 55555554444433 33456666778999999999999988776666655 6799999999999999999999998887
Q ss_pred HHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccCCh
Q 021692 95 GWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAPDH 173 (309)
Q Consensus 95 ~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~~~ 173 (309)
.+... . +++|.+++...+.|.+.+..+.+......+++| ++||.+.|+......+|.++.+.+...+.+.++
T Consensus 91 ~~~~~--~-----~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~ 163 (400)
T PRK11646 91 ATMAI--A-----HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDF 163 (400)
T ss_pred HHHHH--h-----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 76643 2 257777777777787777777777777889998 679999999988888888888776655543334
Q ss_pred HHHHHHHHHH
Q 021692 174 ANLIFMVAVG 183 (309)
Q Consensus 174 ~~~~l~la~~ 183 (309)
+..+.+.++.
T Consensus 164 ~~~f~~~~~~ 173 (400)
T PRK11646 164 RLVCATGAVL 173 (400)
T ss_pred HHHHHHHHHH
Confidence 3333344443
No 32
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.45 E-value=3.6e-11 Score=115.12 Aligned_cols=159 Identities=11% Similarity=0.032 Sum_probs=116.0
Q ss_pred hhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhH
Q 021692 32 GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPL 110 (309)
Q Consensus 32 ~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~ 110 (309)
.+......|.+++++|+|.++.+.+.+...++..+ .++.|++.||+|+|+++.++.++..++..+... . +++
T Consensus 19 ~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~--~-----~~~ 91 (382)
T PRK10091 19 EFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTL--S-----SSY 91 (382)
T ss_pred HHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHH--h-----CcH
Confidence 34555577889999999999999988888888877 569999999999999999999998888766543 2 268
Q ss_pred HHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHHHHH
Q 021692 111 WAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAMVV 188 (309)
Q Consensus 111 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~~v~ 188 (309)
|.+.+...+.|.+.+...........+++| ++|+.+.|+..++..+|..+.+++...+.+. +++.-+...++...+..
T Consensus 92 ~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~ 171 (382)
T PRK10091 92 LMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVL 171 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHH
Confidence 888888888888777766666667789999 4699999998888888888887775544442 33333333444333333
Q ss_pred HHHHhhccc
Q 021692 189 IALMFIIRP 197 (309)
Q Consensus 189 l~~~~~ir~ 197 (309)
+.....+++
T Consensus 172 ~~~~~~lp~ 180 (382)
T PRK10091 172 ASIYFWVPD 180 (382)
T ss_pred HHHHHhCCC
Confidence 333333433
No 33
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.45 E-value=1.6e-11 Score=117.65 Aligned_cols=136 Identities=14% Similarity=0.037 Sum_probs=101.0
Q ss_pred HHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHH-hCCCCChhHHH
Q 021692 35 FGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIV-TGRAPVLPLWA 112 (309)
Q Consensus 35 fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~-~~~i~~~s~~~ 112 (309)
.++....+++++|+|..+.+.+.+...++..+ +++.|++.||+|||+++.++.+...++.....+.. .+.....+++.
T Consensus 35 ~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (399)
T PRK05122 35 LAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLL 114 (399)
T ss_pred HHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHH
Confidence 34444557899999999999998888888777 67999999999999999999988776655443322 22111124566
Q ss_pred HHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 113 MCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 113 l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
+.+...+.|.|.+..+.+......+++| ++||.+.|+......+|..+.+++...+.+
T Consensus 115 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 173 (399)
T PRK05122 115 LLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYH 173 (399)
T ss_pred HHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHH
Confidence 6777778888888888887777789998 779999999777776776666665544444
No 34
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.45 E-value=2.8e-12 Score=133.34 Aligned_cols=181 Identities=16% Similarity=0.130 Sum_probs=134.4
Q ss_pred cchHHHHHHHHHHHHHhhh-hhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHH
Q 021692 13 NNRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQN 90 (309)
Q Consensus 13 ~~rw~~l~~~~l~~~~~g~-~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~ 90 (309)
+.+|..++...++.+..+. ....+...|.+++++|++..+.+++.+...++..+ .+++|+++||+|||++++++.++.
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 4456665555555555554 34456677889999999999999988888888877 559999999999999999998888
Q ss_pred HHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 91 FIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 91 ~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
.++..+..+ . ++++.+.++.++.|+|.+...+.....+.+++| ++||.+.++..++..+|+++.+.+...+.
T Consensus 243 ~i~~ll~af--a-----~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il 315 (742)
T TIGR01299 243 GFFAFFSSF--V-----QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAII 315 (742)
T ss_pred HHHHHHHHH--H-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776655543 2 257888888888888888888888888999999 67999999998888888887765443322
Q ss_pred c--------------CChHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 021692 170 A--------------PDHANLIFMVAVGPAMVVIALMFIIRPVGGH 201 (309)
Q Consensus 170 ~--------------~~~~~~~l~la~~~~~v~l~~~~~ir~~p~~ 201 (309)
. .+|+. ++.++.++.+++++..+++++.|.+
T Consensus 316 ~~~G~~~~~g~~~~~~gWR~-l~~i~~lp~ll~ll~~~~lPESPrw 360 (742)
T TIGR01299 316 PHYGWSFQMGSAYQFHSWRV-FVIVCAFPCVFAIGALTFMPESPRF 360 (742)
T ss_pred HhccchhccccccccccHHH-HHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 1 12333 3445556766777777788877765
No 35
>PRK10054 putative transporter; Provisional
Probab=99.44 E-value=2.5e-11 Score=117.18 Aligned_cols=131 Identities=11% Similarity=0.032 Sum_probs=96.5
Q ss_pred hhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHH
Q 021692 33 YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLW 111 (309)
Q Consensus 33 Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~ 111 (309)
..++.+.+++++++|+|..+.+++.+...++..+ .++.|++.||+|+|+++.++.+...+++.++.+ .+ ++|
T Consensus 25 ~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~--~~-----~~~ 97 (395)
T PRK10054 25 ATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPL--VN-----NVT 97 (395)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHH--Hh-----HHH
Confidence 3345566678899999999999988776666655 679999999999999999999888888776543 22 466
Q ss_pred HHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 112 AMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 112 ~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
.+.+..++.+.+.+...+.......+.+| ++|+++.|+..+...+|.++.+++...+.+
T Consensus 98 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~ 157 (395)
T PRK10054 98 LVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM 157 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66555555554445455555555667787 669999999888888988888766554443
No 36
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.42 E-value=7.4e-11 Score=114.70 Aligned_cols=154 Identities=14% Similarity=0.108 Sum_probs=106.8
Q ss_pred hHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHH
Q 021692 38 ISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCIL 116 (309)
Q Consensus 38 ys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~ 116 (309)
-.|.+.+++|.|..+.+...+...++..+ .++.|.+.||+|||++++.+.+...++..+..+ . ++++.+.+.
T Consensus 38 ~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~--a-----~~~~~l~~~ 110 (413)
T PRK15403 38 GIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLF--T-----TSMTQFLIA 110 (413)
T ss_pred CHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHH--c-----CCHHHHHHH
Confidence 33567889999999998887777777766 568999999999999999998887777665543 2 257777777
Q ss_pred HHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHHHHHHHHHhh
Q 021692 117 IFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAMVVIALMFI 194 (309)
Q Consensus 117 ~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~~v~l~~~~~ 194 (309)
..+.|.+.+...........++|| ++|+.+.++..+..++|..+.+.+...+.+. +++.-+...++...+..+...+.
T Consensus 111 r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~ 190 (413)
T PRK15403 111 RFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLA 190 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 777777777655556667779999 5588999998888888877765544333332 34433334444333332333344
Q ss_pred cccC
Q 021692 195 IRPV 198 (309)
Q Consensus 195 ir~~ 198 (309)
+++.
T Consensus 191 lp~~ 194 (413)
T PRK15403 191 MPET 194 (413)
T ss_pred CCCC
Confidence 5543
No 37
>PRK12382 putative transporter; Provisional
Probab=99.42 E-value=3.8e-11 Score=114.88 Aligned_cols=133 Identities=14% Similarity=0.001 Sum_probs=98.6
Q ss_pred HhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHH-HhCCCCChhHHHH
Q 021692 36 GSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLI-VTGRAPVLPLWAM 113 (309)
Q Consensus 36 svys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~-~~~~i~~~s~~~l 113 (309)
++....+++++|+|..+.+.+.+...++..+ .++.|++.||+|+|++++++.+...++...+.+. .......++++.+
T Consensus 36 p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 115 (392)
T PRK12382 36 PVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALL 115 (392)
T ss_pred hhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHH
Confidence 4444457889999999999998888887776 7799999999999999999988766554332221 1111111357777
Q ss_pred HHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHH
Q 021692 114 CILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMI 168 (309)
Q Consensus 114 ~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~ 168 (309)
.+...+.|.|.+...++......+++| ++||.+.|+......+|.++.+++...+
T Consensus 116 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l 171 (392)
T PRK12382 116 VVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLL 171 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 777788888888887777777889998 7799999998777767777666654433
No 38
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.41 E-value=1.4e-10 Score=111.93 Aligned_cols=128 Identities=15% Similarity=0.175 Sum_probs=95.3
Q ss_pred hHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHH
Q 021692 38 ISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCIL 116 (309)
Q Consensus 38 ys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~ 116 (309)
|.+++.+++|+|..|.+.+.+...++..+ .++.|++.||+|+|+++..+.++..++..++.+.... .++++.+.+.
T Consensus 35 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~ 111 (402)
T TIGR00897 35 WLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLG---HANYPLILLF 111 (402)
T ss_pred hHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhcc---CccHHHHHHH
Confidence 44556678999999999998888887766 6799999999999999999999888775544221111 1256777777
Q ss_pred HHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHH
Q 021692 117 IFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMI 168 (309)
Q Consensus 117 ~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~ 168 (309)
..+.|.|.+....+......+++| ++||.+.|+..+..++|..+.++....+
T Consensus 112 ~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~ 164 (402)
T TIGR00897 112 YGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSY 164 (402)
T ss_pred HHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 777777777665566666778887 7899999999888888876555554433
No 39
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.41 E-value=1.1e-10 Score=111.78 Aligned_cols=180 Identities=9% Similarity=-0.002 Sum_probs=119.8
Q ss_pred hHHHHHHHHHHHHHhh-hhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHH
Q 021692 15 RWLVFVAAMWIQSCAG-IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFI 92 (309)
Q Consensus 15 rw~~l~~~~l~~~~~g-~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~ 92 (309)
.|+.+....++..+.. ..+.+....|.+.+++|+|..+.+.+.+...++..+ .++.|.+.||+|||+++.++.++..+
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~ 85 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFIL 85 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 3455555555543322 233344445788899999999999988888887776 56999999999999999999888887
Q ss_pred HHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC
Q 021692 93 GYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP 171 (309)
Q Consensus 93 gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~ 171 (309)
+...... . ++++.+.+...+.|.+.+...........+++| ++|+.+.++...+..++..+.+.+...+.+.
T Consensus 86 ~~~~~~~--~-----~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~ 158 (394)
T PRK11652 86 GTLVALF--A-----HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTL 158 (394)
T ss_pred HHHHHHH--H-----ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7665543 2 257777777777777776665555556678888 6789888887777766666665554444332
Q ss_pred -ChHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 021692 172 -DHANLIFMVAVGPAMVVIALMFIIRPVGGH 201 (309)
Q Consensus 172 -~~~~~~l~la~~~~~v~l~~~~~ir~~p~~ 201 (309)
+++..+...++...++.++...++++++++
T Consensus 159 ~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 189 (394)
T PRK11652 159 FGWRACYLFLLLLGAGVTFSMARWMPETRPA 189 (394)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHhCCccCcc
Confidence 343333344444444444445566664433
No 40
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.40 E-value=2.4e-11 Score=118.97 Aligned_cols=131 Identities=15% Similarity=0.120 Sum_probs=107.7
Q ss_pred hhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHH
Q 021692 33 YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLW 111 (309)
Q Consensus 33 Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~ 111 (309)
...+...|.+.+++|.|..+.+++.+...++..+ .++.|++.||+|+|+++.++.++..++..+... .++++
T Consensus 19 ~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-------~~~~~ 91 (485)
T TIGR00711 19 TIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGV-------APNLE 91 (485)
T ss_pred HHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhC-------cCCHH
Confidence 3455677889999999999999988888888777 568999999999999999999988888766532 13678
Q ss_pred HHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 112 AMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 112 ~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
.+.+...+.|.+.+...+.......+++| ++||.+.|+......+|..+.+.+...+.+
T Consensus 92 ~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 151 (485)
T TIGR00711 92 LMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIE 151 (485)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhcc
Confidence 88888888888888888888888999999 779999999888888888877766554444
No 41
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.40 E-value=1.1e-10 Score=108.81 Aligned_cols=157 Identities=13% Similarity=0.071 Sum_probs=112.8
Q ss_pred HHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHH
Q 021692 40 PVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIF 118 (309)
Q Consensus 40 ~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~ 118 (309)
|.+..+++.+..+.+.+.+...++..+ .++.|++.||+|+|+++.++.++..++..+........ ..++|.+++...
T Consensus 23 ~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 100 (365)
T TIGR00900 23 PLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLG--GLNIWQVYVLAG 100 (365)
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcC--CCcHHHHHHHHH
Confidence 445566889999999998888888776 67999999999999999999888776666554432111 126888888888
Q ss_pred HHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHHHHHHHHHhhcc
Q 021692 119 VGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAMVVIALMFIIR 196 (309)
Q Consensus 119 l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~~v~l~~~~~ir 196 (309)
+.|.+.+...++......+++| ++|+.+.|+.....++|..+.+.+...+.+. +++..+.+.++ ..+++.+....++
T Consensus 101 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~-~~~~~~~~~~~~~ 179 (365)
T TIGR00900 101 ILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAV-GFAISALLIVSVR 179 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHhcc
Confidence 8888888888888888999999 6799999999999999988777665544432 33333333333 3333444444555
Q ss_pred cCC
Q 021692 197 PVG 199 (309)
Q Consensus 197 ~~p 199 (309)
+++
T Consensus 180 ~~~ 182 (365)
T TIGR00900 180 IPE 182 (365)
T ss_pred ccc
Confidence 443
No 42
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.40 E-value=1.3e-10 Score=111.86 Aligned_cols=178 Identities=11% Similarity=0.092 Sum_probs=116.2
Q ss_pred cchHHHHHHHHHHHHHhh-hhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHH
Q 021692 13 NNRWLVFVAAMWIQSCAG-IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQN 90 (309)
Q Consensus 13 ~~rw~~l~~~~l~~~~~g-~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~ 90 (309)
++.|...+...+....+. ....+....+.+++++|+|+.+.+...+...++..+ .++.|.+.||+|+|+++.++.+..
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 88 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFF 88 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 444444444444443322 233333445678899999999999888777777766 569999999999999999998888
Q ss_pred HHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 91 FIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 91 ~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
.++..+... . ++++.+.....+.|.+.+.........+.++|| ++|+.+.++.....++|..+.+.+...+.
T Consensus 89 ~~~~~~~~~--~-----~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~ 161 (406)
T PRK15402 89 ILTCLAILL--A-----QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALI 161 (406)
T ss_pred HHHHHHHHH--H-----ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777665543 2 257777777777777777766677777889999 55888888877777677666665544443
Q ss_pred cC-ChHHHHHHHHHHHHHHHHHHHhhccc
Q 021692 170 AP-DHANLIFMVAVGPAMVVIALMFIIRP 197 (309)
Q Consensus 170 ~~-~~~~~~l~la~~~~~v~l~~~~~ir~ 197 (309)
+. +++..+++.++..++..+.....+++
T Consensus 162 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 190 (406)
T PRK15402 162 HVLPWRGMFVLFAALAALSFFGLWRAMPE 190 (406)
T ss_pred HccCccHHHHHHHHHHHHHHHHHHHhCCC
Confidence 32 33333334444433333323333443
No 43
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.39 E-value=1.4e-12 Score=127.84 Aligned_cols=150 Identities=9% Similarity=0.046 Sum_probs=113.7
Q ss_pred hhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhc
Q 021692 45 SLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNG 123 (309)
Q Consensus 45 ~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g 123 (309)
++|++..+.+.+.+...++..+ +++.|++.||+|+|+++.++.++..++..+....... +++.+.+...+.|.+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~r~~~G~~ 144 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGG-----GIALVVFCRVIQGLA 144 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHc-----CchHHHHHHHHHHHh
Confidence 7899999999988888888877 5699999999999999999998887776655433222 356677777788888
Q ss_pred hhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC--ChHHHHHHHHHHHHHHHHHHHhhcccCC
Q 021692 124 ETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP--DHANLIFMVAVGPAMVVIALMFIIRPVG 199 (309)
Q Consensus 124 ~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~--~~~~~~l~la~~~~~v~l~~~~~ir~~p 199 (309)
.+...++......+||| ++||++.|+..++..+|.++.+++...+.+. +++..+++.++...+..++...+.++.|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p 223 (465)
T TIGR00894 145 QGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDP 223 (465)
T ss_pred cccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCc
Confidence 88888888889999999 6799999999998889999988887665533 3333334445555444455555566544
No 44
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.39 E-value=9.5e-11 Score=110.99 Aligned_cols=159 Identities=11% Similarity=0.101 Sum_probs=116.4
Q ss_pred hHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHH
Q 021692 34 LFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWA 112 (309)
Q Consensus 34 ~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~ 112 (309)
.+.-..|.+.+++|+|..+.+.+.+...++..+ .++.|++.||+|||+++.++.++..++..++... ++++.
T Consensus 9 ~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~-------~~~~~ 81 (377)
T PRK11102 9 MYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA-------QTIDQ 81 (377)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH-------ccHHH
Confidence 344556778889999999999988888887777 6699999999999999999999888877666542 24677
Q ss_pred HHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHHHHHHH
Q 021692 113 MCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAMVVIA 190 (309)
Q Consensus 113 l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~~v~l~ 190 (309)
+.+...+.|.+.+..+........+++| ++|+.+.|+...+.++|..+.+.+...+.+. +++..+...++...+..++
T Consensus 82 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (377)
T PRK11102 82 LIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAAL 161 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHH
Confidence 7777777788888887788888889999 5699999998888888887776665544432 3333333344444343444
Q ss_pred HHhhcccCC
Q 021692 191 LMFIIRPVG 199 (309)
Q Consensus 191 ~~~~ir~~p 199 (309)
..+++++++
T Consensus 162 ~~~~~~~~~ 170 (377)
T PRK11102 162 VFFFIPETL 170 (377)
T ss_pred HHHhCCccC
Confidence 455666543
No 45
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.39 E-value=2.1e-11 Score=115.06 Aligned_cols=128 Identities=17% Similarity=0.049 Sum_probs=102.2
Q ss_pred hhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHH
Q 021692 33 YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLW 111 (309)
Q Consensus 33 Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~ 111 (309)
.+++...|.+++++|+|.++.+.+.+...++..+ +++.|++.||+|+|+++.++.++..++.... . . ++.+
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~--~-----~~~~ 88 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-S--A-----PGTA 88 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-H--h-----ccHH
Confidence 3456778899999999999999998888888877 6699999999999999999988877766543 1 1 2466
Q ss_pred HHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHH
Q 021692 112 AMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMI 168 (309)
Q Consensus 112 ~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~ 168 (309)
.+.+...+.|.|.+...+.......++||++||.+.|+.....++|..+.+.+...+
T Consensus 89 ~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l 145 (355)
T TIGR00896 89 LLFAGTALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPL 145 (355)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666667777888887776666677899999999999999888888887776654433
No 46
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.39 E-value=7.5e-11 Score=114.84 Aligned_cols=137 Identities=16% Similarity=0.148 Sum_probs=112.2
Q ss_pred hhhhhhH-HhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 021692 29 AGIGYLF-GSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAP 106 (309)
Q Consensus 29 ~g~~Y~f-svys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~ 106 (309)
-|..+.. +...|.+++++|+|..|.+.+.+...++..+ +++.|++.||+|+|+++.+|.++..+|..++......
T Consensus 15 ~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~--- 91 (410)
T TIGR00885 15 WGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEI--- 91 (410)
T ss_pred HHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhh---
Confidence 3443333 4677999999999999999998888888877 6799999999999999999999999888776433211
Q ss_pred ChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 107 VLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 107 ~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
++++.+.....+.|.|.+..+++......++.| ++|+...++..+++++|+.+.+.+...++
T Consensus 92 -~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 92 -MNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred -ccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 268888888888999999999888888888998 66999999999999999988877665553
No 47
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.37 E-value=2.1e-10 Score=111.74 Aligned_cols=148 Identities=10% Similarity=-0.065 Sum_probs=98.3
Q ss_pred cchHHHHHHHHHHHHHhhh-hhhHHhhHHHHHHhhC---CCHHHHHHH---HHHHHHHhhh-hhhhhhhccccchHHHHH
Q 021692 13 NNRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLN---YNQKQIARL---GVAKDLGDSV-GFLAGSLCEVLPIWGALL 84 (309)
Q Consensus 13 ~~rw~~l~~~~l~~~~~g~-~Y~fsvys~~l~~~lg---~s~~~~~~i---~~~~~vg~~~-~~~~G~L~Dr~Gpr~vll 84 (309)
.+||..++.+.+....... .+.+++..+.++++++ .+..+...+ .....++..+ +++.|++.||+|||+++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~ 97 (432)
T PRK10406 18 RRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSML 97 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 4556555555555544443 4557777788988884 555544332 2333344445 558999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCC-CCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHH
Q 021692 85 VGALQNFIGYGWVWLIVTGR-APVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAI 160 (309)
Q Consensus 85 ig~~l~~~gy~l~~l~~~~~-i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai 160 (309)
++.++..++..+..++.+-. +...+++.+.+...+.|.|.+..+..+...+.||+| ++||.+.++...+...|..+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~ 175 (432)
T PRK10406 98 ISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLL 175 (432)
T ss_pred HHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHH
Confidence 99999888776654421100 000123456677788899998888888899999999 77999988865555444333
No 48
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.36 E-value=1.1e-10 Score=112.27 Aligned_cols=185 Identities=16% Similarity=0.100 Sum_probs=123.5
Q ss_pred ccchHHHHHHHHHHH-HHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHH-HhhhhhhhhhhccccchHHHHHHHHHH
Q 021692 12 FNNRWLVFVAAMWIQ-SCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDL-GDSVGFLAGSLCEVLPIWGALLVGALQ 89 (309)
Q Consensus 12 ~~~rw~~l~~~~l~~-~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~v-g~~~~~~~G~L~Dr~Gpr~vllig~~l 89 (309)
++.+++.|..+.+.. .+-..=+.|+...+.+++++|+|..|..++...-.+ |..+=++.|.+.||+|+|++..++.++
T Consensus 9 k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l 88 (417)
T COG2223 9 KRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLL 88 (417)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHH
Confidence 455667777777766 444445677777789999999999999988655544 445567999999999999999999988
Q ss_pred HHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHH---HHH
Q 021692 90 NFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILT---QVY 165 (309)
Q Consensus 90 ~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~---~i~ 165 (309)
..+-.+... +...- +++|++.+...+.|.+.+-+ ...+....+||| +++|.|.||.-.+| +|.++.. |..
T Consensus 89 ~~IP~~~~~--~a~~~--~~~~~ll~~gll~G~~GasF-av~m~~~s~~fP~~~qG~AlGI~g~GN-~G~av~q~~~P~v 162 (417)
T COG2223 89 LLIPCLGLA--FAVTY--PSTWQLLVIGLLLGLAGASF-AVGMPNASFFFPKEKQGLALGIAGAGN-LGVAVAQLVAPLV 162 (417)
T ss_pred HHHHHHHHH--HHccC--CchHHHHHHHHHHhccccee-hcccccccccCChhhhhHHHHHhcccc-ccHHHHHHHHHHH
Confidence 765544443 33332 36788877776666543332 356667889999 77999999988777 8877653 222
Q ss_pred HHHccC-ChHHHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 021692 166 TMIHAP-DHANLIFMVAVGPAMVVIALMFIIRPVGGHR 202 (309)
Q Consensus 166 ~~~~~~-~~~~~~l~la~~~~~v~l~~~~~ir~~p~~~ 202 (309)
...+.. .+..-.....+..++..+...+.++|.|+++
T Consensus 163 ~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r 200 (417)
T COG2223 163 AVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHR 200 (417)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhh
Confidence 222221 1221111112222334566688899988763
No 49
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.36 E-value=1.2e-11 Score=118.98 Aligned_cols=159 Identities=13% Similarity=0.048 Sum_probs=113.6
Q ss_pred HhhHHHHHHhhCCC--------HHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 021692 36 GSISPVIKSSLNYN--------QKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAP 106 (309)
Q Consensus 36 svys~~l~~~lg~s--------~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~ 106 (309)
+...+.++.+++.+ +.+.+.+.+...++..+ +++.|++.||+|||++++++.++..++..+..+. ..
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~-~~--- 123 (481)
T TIGR00879 48 GGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLA-AF--- 123 (481)
T ss_pred hhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHh-cc---
Confidence 33345556666655 88999988888888777 6699999999999999999999888777665432 11
Q ss_pred ChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHH-H-HHc-cC-ChHHHHHHHH
Q 021692 107 VLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVY-T-MIH-AP-DHANLIFMVA 181 (309)
Q Consensus 107 ~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~-~-~~~-~~-~~~~~~l~la 181 (309)
..++|.+.+...+.|.|.+..+......+.+++| ++||.+.|+...+.++|..+.+.+. . ... +. +++..+.+ .
T Consensus 124 ~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~-~ 202 (481)
T TIGR00879 124 ALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGL-Q 202 (481)
T ss_pred ccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHH-H
Confidence 1246677778888888988888888888999999 6799999999888888888887765 1 222 22 33333323 4
Q ss_pred HHHHHHHHHHHhhcccCC
Q 021692 182 VGPAMVVIALMFIIRPVG 199 (309)
Q Consensus 182 ~~~~~v~l~~~~~ir~~p 199 (309)
....++.++..+++++.|
T Consensus 203 ~~~~~~~~~~~~~l~~~~ 220 (481)
T TIGR00879 203 LIPAGLLFLGLFFLPESP 220 (481)
T ss_pred HHHHHHHHHHHhcCCCCh
Confidence 444444555556666554
No 50
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.35 E-value=3.2e-11 Score=118.80 Aligned_cols=160 Identities=11% Similarity=0.013 Sum_probs=125.6
Q ss_pred hhhhHHhhHHHHHHhhCCCHHH-HHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCCh
Q 021692 31 IGYLFGSISPVIKSSLNYNQKQ-IARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVL 108 (309)
Q Consensus 31 ~~Y~fsvys~~l~~~lg~s~~~-~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~ 108 (309)
.--..++-.|++++++|+|..| .+.+..+...+..+ .+++|++.||+|+|+++.++++.-.+...+..++ .
T Consensus 41 ~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa-------~ 113 (511)
T TIGR00806 41 FRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG-------T 113 (511)
T ss_pred hhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH-------H
Confidence 3456677788999999999999 88888877777766 5699999999999999999998888777666542 2
Q ss_pred hHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccCChHHHHH--HHHHHHH
Q 021692 109 PLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIF--MVAVGPA 185 (309)
Q Consensus 109 s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~~~~~~~l--~la~~~~ 185 (309)
+++.+.+..++.|.+.+... +....+.+||| ++|++++|+..++.-+|.++.+++...+..-+++.|.. .+.+...
T Consensus 114 Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~ 192 (511)
T TIGR00806 114 SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFM 192 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 68888888899999999888 89999999999 67999999999999999999888776633323443432 2444455
Q ss_pred HHHHHHHhhcccC
Q 021692 186 MVVIALMFIIRPV 198 (309)
Q Consensus 186 ~v~l~~~~~ir~~ 198 (309)
.++++.++++..|
T Consensus 193 ~~a~~~a~~LP~~ 205 (511)
T TIGR00806 193 TFSVFLALFLKRP 205 (511)
T ss_pred HHHHHHHHhCCCC
Confidence 5666777777643
No 51
>PRK11043 putative transporter; Provisional
Probab=99.35 E-value=2.6e-10 Score=109.41 Aligned_cols=140 Identities=13% Similarity=0.053 Sum_probs=100.2
Q ss_pred hHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHH
Q 021692 38 ISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCIL 116 (309)
Q Consensus 38 ys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~ 116 (309)
..+++++++|+|..+.+.+.+...++..+ +++.|++.||+|+|+++.++.++..++..+... . ++++.+.+.
T Consensus 28 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~--~-----~~~~~l~~~ 100 (401)
T PRK11043 28 AFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLW--V-----ESAAQLLVL 100 (401)
T ss_pred hHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHH--h-----cCHHHHHHH
Confidence 33567889999999999998888888777 569999999999999999998888777665543 2 257777776
Q ss_pred HHHHHhchhhhhhhHHHHHhhhcCC-CCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHH
Q 021692 117 IFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGP 184 (309)
Q Consensus 117 ~~l~g~g~~~~~~~~~~~~~~~FP~-~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~ 184 (309)
..+.|.+.+...........++||+ +|+.+.+......++|+++.+.+...+.+. +++..+...++..
T Consensus 101 ~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~ 170 (401)
T PRK11043 101 RFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAIT 170 (401)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Confidence 7777776666555555667799995 477777877767777777776665544432 3433333334433
No 52
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.35 E-value=2.7e-10 Score=113.62 Aligned_cols=147 Identities=14% Similarity=0.004 Sum_probs=104.7
Q ss_pred cchHHHHHHHHHHHHH-hhhhhhHHhhH-HHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccc-cchHHHHHHHHH
Q 021692 13 NNRWLVFVAAMWIQSC-AGIGYLFGSIS-PVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEV-LPIWGALLVGAL 88 (309)
Q Consensus 13 ~~rw~~l~~~~l~~~~-~g~~Y~fsvys-~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr-~Gpr~vllig~~ 88 (309)
+++|+.+...+....+ ....|....+. .++++++|+++++.+++........+. .+++|++.|| +|+|+++++|.+
T Consensus 10 ~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~ 89 (489)
T PRK10207 10 LQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAI 89 (489)
T ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHH
Confidence 4566666666555543 34566655444 567889999999998876655544544 5699999999 999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-C--CCCcchhhhhhhhhhhHHHHHHHH
Q 021692 89 QNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-K--SRGPVVGILKGFAGLGGAILTQVY 165 (309)
Q Consensus 89 l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~--~RG~avGi~~~~~GLg~ai~~~i~ 165 (309)
+..+|+....+. .. ....+.+...+.+.|.+...+.....+.++|| + +|+.+.++......+|+++.+.+.
T Consensus 90 ~~~~g~~~~~~~--~~----~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~ 163 (489)
T PRK10207 90 VLAIGYFMTGMS--LL----KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLA 163 (489)
T ss_pred HHHHHHHHHHHh--cc----chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHH
Confidence 999998776643 11 12234345566778888887777788889998 3 357778887777778877654443
No 53
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.33 E-value=4.6e-11 Score=118.80 Aligned_cols=186 Identities=12% Similarity=0.044 Sum_probs=124.0
Q ss_pred hHHHHHHHHHHHHHhhhh-hhHHhhHHHHHHhh-----CCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHH
Q 021692 15 RWLVFVAAMWIQSCAGIG-YLFGSISPVIKSSL-----NYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGA 87 (309)
Q Consensus 15 rw~~l~~~~l~~~~~g~~-Y~fsvys~~l~~~l-----g~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~ 87 (309)
+++.+..+.+..+..|.. ...+...+.+++++ +.+..+.+.+.....++..+ .++.|++.||+|||+++.++.
T Consensus 14 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~ 93 (502)
T TIGR00887 14 HFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMEL 93 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 444444444444444442 22333345555532 34556667777777787777 558999999999999999998
Q ss_pred HHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHH
Q 021692 88 LQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYT 166 (309)
Q Consensus 88 ~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~ 166 (309)
++..++..+..+..... +..+++.+.+...+.|.+.+..++.......+++| ++||.+.++......+|..+.+.+..
T Consensus 94 ~~~~v~~~~~~~~~~~~-~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~ 172 (502)
T TIGR00887 94 IIMIIATVASGLSPGSS-PKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVAL 172 (502)
T ss_pred HHHHHHHHHHHHccCcc-cchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887776655432211 01136777788888899999988889999999999 67999999988888787766654432
Q ss_pred HH---cc--------------------CChHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 021692 167 MI---HA--------------------PDHANLIFMVAVGPAMVVIALMFIIRPVGGH 201 (309)
Q Consensus 167 ~~---~~--------------------~~~~~~~l~la~~~~~v~l~~~~~ir~~p~~ 201 (309)
.+ +. ++.+.+.++++.++.++.++..+++++.|++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~ 230 (502)
T TIGR00887 173 IVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRY 230 (502)
T ss_pred HHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHH
Confidence 21 11 1123444466777777777777778877653
No 54
>PRK10133 L-fucose transporter; Provisional
Probab=99.33 E-value=2.7e-10 Score=111.90 Aligned_cols=147 Identities=16% Similarity=0.134 Sum_probs=112.5
Q ss_pred hHHHHHHHHHHHHHhh-hhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHH
Q 021692 15 RWLVFVAAMWIQSCAG-IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFI 92 (309)
Q Consensus 15 rw~~l~~~~l~~~~~g-~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~ 92 (309)
.+..++.-..+...-+ ....-+.+.|.+++++|+|..+.+...+...++..+ +++.|.+.||+|+|+++.+|.++..+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~ 103 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYAL 103 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 3444343333333333 344556778999999999999999998888888877 66999999999999999999999998
Q ss_pred HHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCC-CCcchhhhhhhhhhhHHHHHHHH
Q 021692 93 GYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKS-RGPVVGILKGFAGLGGAILTQVY 165 (309)
Q Consensus 93 gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~-RG~avGi~~~~~GLg~ai~~~i~ 165 (309)
+..++..... +++++.+.+...+.|.|.+..+++......++.|++ |+...++..+..++|..+.+.+-
T Consensus 104 ~~~l~~~~~~----a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g 173 (438)
T PRK10133 104 GAALFWPAAE----IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFG 173 (438)
T ss_pred HHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8876532211 136888888888999999999888888888888755 44578898888888888776553
No 55
>PRK10504 putative transporter; Provisional
Probab=99.33 E-value=1.1e-10 Score=114.37 Aligned_cols=132 Identities=11% Similarity=0.073 Sum_probs=103.3
Q ss_pred hhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhH
Q 021692 32 GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPL 110 (309)
Q Consensus 32 ~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~ 110 (309)
.+.++...|.+.+++|+|+.+.+.+.+...++..+ .++.|+++||+|+|++++++.++..++..+..+ . +++
T Consensus 26 ~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~--~-----~~~ 98 (471)
T PRK10504 26 TTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCAL--S-----GTL 98 (471)
T ss_pred HHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH--h-----CCH
Confidence 44556677888889999999998887777777665 668999999999999999998887777765432 2 257
Q ss_pred HHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 111 WAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 111 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
+.+.+...+.|.|.+...........+++| ++|+.+.|+......+|..+.+.+...+.+
T Consensus 99 ~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~ 159 (471)
T PRK10504 99 NELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVE 159 (471)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh
Confidence 777777788888888777777777889999 569999999887777888777766554444
No 56
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.32 E-value=4.9e-10 Score=103.29 Aligned_cols=132 Identities=23% Similarity=0.304 Sum_probs=110.5
Q ss_pred hhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhH
Q 021692 32 GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPL 110 (309)
Q Consensus 32 ~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~ 110 (309)
.+.++.+.+.+.+++|.++.+.+.+.+...++..+ .++.|++.||+|||+.+.++.++..++.....+. +++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~~ 87 (352)
T cd06174 15 RGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA-------SSL 87 (352)
T ss_pred hhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHh-------ccH
Confidence 45566677888888999999999998888888777 6799999999999999999999999888776553 257
Q ss_pred HHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 111 WAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 111 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
+.+.+...+.|.+.+..+........+++| ++|+.+.|+.....++|+.+.+.+...+.+
T Consensus 88 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 148 (352)
T cd06174 88 WLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAE 148 (352)
T ss_pred HHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 788888888888888888888888999999 579999999999998998888776665544
No 57
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.32 E-value=4e-11 Score=117.44 Aligned_cols=123 Identities=14% Similarity=0.059 Sum_probs=95.0
Q ss_pred HHHHHhh--------CCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHH---hCCC-C
Q 021692 40 PVIKSSL--------NYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIV---TGRA-P 106 (309)
Q Consensus 40 ~~l~~~l--------g~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~---~~~i-~ 106 (309)
+.+++.+ |++..+.+++.+...++..+ +++.|++.||+|||++++++.++..++..+.++.. .... .
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~ 115 (479)
T PRK10077 36 ESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPD 115 (479)
T ss_pred HHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcccccccccc
Confidence 5566655 89999999988888888877 56999999999999999999998887766554321 0000 0
Q ss_pred -ChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHH
Q 021692 107 -VLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILT 162 (309)
Q Consensus 107 -~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~ 162 (309)
...++.+.+...+.|.+.+..+......+.+|+| ++||.++|+...+..+|..+..
T Consensus 116 ~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~ 173 (479)
T PRK10077 116 NTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVY 173 (479)
T ss_pred chhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHH
Confidence 1124556677788899999988888889999999 6699999998888878877653
No 58
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.31 E-value=2.4e-10 Score=109.19 Aligned_cols=158 Identities=16% Similarity=0.074 Sum_probs=103.5
Q ss_pred hHHhhHHHHHHhhCCCHHHH-----HHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 021692 34 LFGSISPVIKSSLNYNQKQI-----ARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPV 107 (309)
Q Consensus 34 ~fsvys~~l~~~lg~s~~~~-----~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~ 107 (309)
.+..+.|.+.+++|++..+. +.+.+...++..+ +++.|++.||+|+|+++.++.+...++..++.. .
T Consensus 32 ~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~--~----- 104 (408)
T PRK09874 32 LVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGL--A----- 104 (408)
T ss_pred HhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHH--H-----
Confidence 34456677777899886553 4455555555555 678999999999999999998888877766543 2
Q ss_pred hhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHH
Q 021692 108 LPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPA 185 (309)
Q Consensus 108 ~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~ 185 (309)
+++|.+.+...+.|.+.+. .........+++| ++||.+.|+......+|..+.+.+...+.+. +++..+...++..+
T Consensus 105 ~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 183 (408)
T PRK09874 105 QNIWQFLILRALLGLLGGF-VPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLF 183 (408)
T ss_pred hhHHHHHHHHHHHHHhhhh-HHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 2577777666666665444 3444556678888 6799999998887778877776665544432 33333333444333
Q ss_pred HHHHHHHhhcccCC
Q 021692 186 MVVIALMFIIRPVG 199 (309)
Q Consensus 186 ~v~l~~~~~ir~~p 199 (309)
+..+....++|+++
T Consensus 184 ~~~~~~~~~~~~~~ 197 (408)
T PRK09874 184 LCFLVTLFCIRENF 197 (408)
T ss_pred HHHHHHHHHhccCc
Confidence 33444456666653
No 59
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.31 E-value=8.7e-10 Score=105.42 Aligned_cols=129 Identities=14% Similarity=0.155 Sum_probs=102.5
Q ss_pred hHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHH
Q 021692 34 LFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWA 112 (309)
Q Consensus 34 ~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~ 112 (309)
....+.|.+++++|+|..|.+.+.+...++..+ .++.|++.||+|+|+++.++.++..++..+..+ . +++|.
T Consensus 24 ~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~--~-----~~~~~ 96 (381)
T PRK03633 24 VLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGL--M-----VGFWS 96 (381)
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--h-----ccHHH
Confidence 345667888889999999999998888888877 668999999999999999999998888766543 2 25777
Q ss_pred HHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 113 MCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 113 l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
+.+...+.|.+.+...........++.| ++||.+.|+...+..+|.++.+.+...+.
T Consensus 97 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 154 (381)
T PRK03633 97 WLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVS 154 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 7777778888877776665555666666 78999999988888888888777655443
No 60
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.30 E-value=1.5e-10 Score=114.82 Aligned_cols=140 Identities=15% Similarity=-0.023 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHhhh-hhhHHhhHHHHHHhhCCCHHH----HHHH--HHHHHHHhhh-hhhhhhhccccchHHHHHHHH
Q 021692 16 WLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQ----IARL--GVAKDLGDSV-GFLAGSLCEVLPIWGALLVGA 87 (309)
Q Consensus 16 w~~l~~~~l~~~~~g~-~Y~fsvys~~l~~~lg~s~~~----~~~i--~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~ 87 (309)
|..+.++.+.....+. .+.++...+.+.++++.+.++ +... .+...++..+ +++.|++.||+|||+++.++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 3444444444444444 344555567888888643322 2221 2333455555 558999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCChhHH--------HHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhH
Q 021692 88 LQNFIGYGWVWLIVTGRAPVLPLW--------AMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGG 158 (309)
Q Consensus 88 ~l~~~gy~l~~l~~~~~i~~~s~~--------~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ 158 (309)
++..++..+..++ ++++ .+.+...+.|.|.+..+++....+.+||| ++||.+.++...+..+|.
T Consensus 95 ~l~~i~~~~~a~~-------~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~ 167 (490)
T PRK10642 95 VIMSISTFCIGLI-------PSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGF 167 (490)
T ss_pred HHHHHHHHHHHhc-------ccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 9999887776542 2333 35667788899999888889999999998 779999999876665665
Q ss_pred HHHH
Q 021692 159 AILT 162 (309)
Q Consensus 159 ai~~ 162 (309)
.+.+
T Consensus 168 ~lg~ 171 (490)
T PRK10642 168 VLGA 171 (490)
T ss_pred HHHH
Confidence 5544
No 61
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.28 E-value=2.7e-10 Score=113.04 Aligned_cols=182 Identities=10% Similarity=0.108 Sum_probs=104.2
Q ss_pred chHHHHHHHHHHH-HHhhhhhhHHhhHHHH-HHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHH
Q 021692 14 NRWLVFVAAMWIQ-SCAGIGYLFGSISPVI-KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQN 90 (309)
Q Consensus 14 ~rw~~l~~~~l~~-~~~g~~Y~fsvys~~l-~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~ 90 (309)
++|..+....... ......|.+..|.|.+ ++.+|++..+.........++..+ .++.|++.||+|+|+++.++.+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~ 326 (490)
T PRK10642 247 KHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVAL 326 (490)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 3444444333333 2334567777777765 677899988766665555566666 457999999999999988887654
Q ss_pred H-HHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHH
Q 021692 91 F-IGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMI 168 (309)
Q Consensus 91 ~-~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~ 168 (309)
. .+++++.....+ +.+.+.....+.+.+.+...........+.|| +.||+++|+......+++.+.+.+...+
T Consensus 327 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l 401 (490)
T PRK10642 327 FVLAIPAFILINSN-----VIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWL 401 (490)
T ss_pred HHHHHHHHHHHhCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 344333322221 34444444444444444444444455668999 5699999984333335555555554444
Q ss_pred cc--CChHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 021692 169 HA--PDHANLIFMVAVGPAMVVIALMFIIRPVGGH 201 (309)
Q Consensus 169 ~~--~~~~~~~l~la~~~~~v~l~~~~~ir~~p~~ 201 (309)
.+ +++...... ...+.+++++..+++++.|.+
T Consensus 402 ~~~~~~~~~~~~~-~~~~~~i~~~~~~~~pes~~~ 435 (490)
T PRK10642 402 VESTQNLMMPAYY-LMVVAVIGLITGVTMKETANR 435 (490)
T ss_pred HHHhCCchHHHHH-HHHHHHHHHHHHHHhccccCC
Confidence 32 222222222 233445566666777766654
No 62
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.28 E-value=2.8e-09 Score=100.44 Aligned_cols=159 Identities=8% Similarity=0.020 Sum_probs=96.9
Q ss_pred HhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHH-HHHHHHHHHHHHHHHhCCCCChhHHHH
Q 021692 36 GSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVG-ALQNFIGYGWVWLIVTGRAPVLPLWAM 113 (309)
Q Consensus 36 svys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig-~~l~~~gy~l~~l~~~~~i~~~s~~~l 113 (309)
+.+...+++++|+|..+.+.+.+...+...+ +++.|.+.||+|+|+++++. .+...++..+.+. . +++|.+
T Consensus 18 ~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~--~-----~~~~~l 90 (375)
T TIGR00899 18 PTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW--N-----RNYFLL 90 (375)
T ss_pred hHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh--c-----chHHHH
Confidence 3344458889999999999987776665554 77999999999999876654 4444455444432 2 257776
Q ss_pred HHHHHHHHhchhhhhhhHHHHHhhhcCC-CCCcc--hhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHHHHHH
Q 021692 114 CILIFVGNNGETYFNTAALVSCVQNFPK-SRGPV--VGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAMVVI 189 (309)
Q Consensus 114 ~~~~~l~g~g~~~~~~~~~~~~~~~FP~-~RG~a--vGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~~v~l 189 (309)
++...+.+.+.+...........++.|+ +|+.+ .|+..++.++|.++.+++...+.+. +++.-++..++...+..+
T Consensus 91 ~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~ 170 (375)
T TIGR00899 91 LVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGV 170 (375)
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 6655444444444444444445577773 35543 5776677778888877766555432 343333344444333344
Q ss_pred HHHhhcccCCCC
Q 021692 190 ALMFIIRPVGGH 201 (309)
Q Consensus 190 ~~~~~ir~~p~~ 201 (309)
+..++++++|++
T Consensus 171 ~~~~~~~~~~~~ 182 (375)
T TIGR00899 171 LVWLFLPSYPRG 182 (375)
T ss_pred HHHHhCCCcccC
Confidence 444556665543
No 63
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.27 E-value=1.7e-09 Score=108.00 Aligned_cols=150 Identities=14% Similarity=0.018 Sum_probs=99.0
Q ss_pred hHHHHHHHHHHH-HHhhhhhhHHhhHH-HHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhcccc-chHHHHHHHHHHH
Q 021692 15 RWLVFVAAMWIQ-SCAGIGYLFGSISP-VIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVL-PIWGALLVGALQN 90 (309)
Q Consensus 15 rw~~l~~~~l~~-~~~g~~Y~fsvys~-~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~-Gpr~vllig~~l~ 90 (309)
|++.+...+... ......|.+..+.+ .+++++|+++.+.+.+........++ .+++|++.||+ |+|+++.+|.++.
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~ 86 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLM 86 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHH
Confidence 444444444444 33445676655554 45778999999999887766666666 45999999999 9999999999999
Q ss_pred HHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCC---CCCcchhhhhhhhhhhHHHHHHHHHH
Q 021692 91 FIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK---SRGPVVGILKGFAGLGGAILTQVYTM 167 (309)
Q Consensus 91 ~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~---~RG~avGi~~~~~GLg~ai~~~i~~~ 167 (309)
.+|+.++.. .+. +.+.+.+...+...|.+...+.......+.||+ +|+.+.++.-....+|+.+.+.+...
T Consensus 87 ~lg~lll~~--~~~----~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~ 160 (493)
T PRK15462 87 AIGHVVLGA--SEI----HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY 160 (493)
T ss_pred HHHHHHHHH--hhc----chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHH
Confidence 999876542 111 112222222233345555544445567899994 59999999777677777766666554
Q ss_pred Hcc
Q 021692 168 IHA 170 (309)
Q Consensus 168 ~~~ 170 (309)
+.+
T Consensus 161 L~~ 163 (493)
T PRK15462 161 AQE 163 (493)
T ss_pred HHh
Confidence 443
No 64
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.27 E-value=8.5e-10 Score=106.65 Aligned_cols=132 Identities=14% Similarity=-0.010 Sum_probs=99.3
Q ss_pred HHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHH-HhCCCCChhHHH
Q 021692 35 FGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLI-VTGRAPVLPLWA 112 (309)
Q Consensus 35 fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~-~~~~i~~~s~~~ 112 (309)
...+.|.+.++++.+..+.+.+.+...++..+ +++.|++.||+|+|+++.++.++..+++.+.... +.. .++++.
T Consensus 36 ~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 112 (417)
T PRK10489 36 LGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLP---EPSLLA 112 (417)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcC---CCcHHH
Confidence 34455667777888999999998888888776 6699999999999999998888777766554321 111 135777
Q ss_pred HHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 113 MCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 113 l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
+.+...+.|.+.+...++......+++| ++|+.+.++.....++|..+.+.+...+.
T Consensus 113 l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~ 170 (417)
T PRK10489 113 IYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLI 170 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHH
Confidence 7666667777777777777778889998 66999999988778788877766655444
No 65
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.24 E-value=3.9e-09 Score=105.51 Aligned_cols=135 Identities=14% Similarity=0.021 Sum_probs=93.9
Q ss_pred hhhhhHHhhH-HHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccc-cchHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 021692 30 GIGYLFGSIS-PVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEV-LPIWGALLVGALQNFIGYGWVWLIVTGRAP 106 (309)
Q Consensus 30 g~~Y~fsvys-~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr-~Gpr~vllig~~l~~~gy~l~~l~~~~~i~ 106 (309)
...|.+..+. ..+++++|+|.++...+........+. .+++|++.|| +|+|+++.+|.++..+|+.++.+. .
T Consensus 35 ~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~--~--- 109 (500)
T PRK09584 35 FGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWS--G--- 109 (500)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh--c---
Confidence 3455555554 456889999999887765544433333 4589999999 599999999999999888776542 1
Q ss_pred ChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCC---CCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 107 VLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKS---RGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 107 ~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~---RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
.+.+.+.+...+.+.|.+...........++||++ |+.+.++......+|+++.+.+...+.+
T Consensus 110 -~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~ 175 (500)
T PRK09584 110 -HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAA 175 (500)
T ss_pred -ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 12444444555667777777666667788999843 4457777667777888777666555544
No 66
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.24 E-value=4.2e-10 Score=108.63 Aligned_cols=141 Identities=13% Similarity=0.092 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHH
Q 021692 16 WLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGY 94 (309)
Q Consensus 16 w~~l~~~~l~~~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy 94 (309)
++.+..+.++.......+. ...+.+.+++|.+..+.+.+.+...+...+ ++++|+++||+|+|++++++.++..++.
T Consensus 5 f~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~ 82 (393)
T PRK11195 5 FYAIMAAQFFSALADNALL--FAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGC 82 (393)
T ss_pred HHHHHHHHHHHHHHHHHHH--HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHH
Confidence 4445555444433222222 233455678999999998888777777766 7799999999999999999998887665
Q ss_pred HHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHH
Q 021692 95 GWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMI 168 (309)
Q Consensus 95 ~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~ 168 (309)
.+.... .+. .+...+.|.+.+..+++....+.+++| ++|+.+.|+..+...+|.++.+.+...+
T Consensus 83 ~~~~~~-------~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l 147 (393)
T PRK11195 83 LLMLFG-------IHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGAL 147 (393)
T ss_pred HHHHHH-------HHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 544321 122 334456788889999999999999999 6799999998887766666665554433
No 67
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.24 E-value=4.4e-09 Score=101.63 Aligned_cols=165 Identities=16% Similarity=0.099 Sum_probs=128.9
Q ss_pred cchHHHHHHHHHHHHHhhh-hhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHH
Q 021692 13 NNRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQN 90 (309)
Q Consensus 13 ~~rw~~l~~~~l~~~~~g~-~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~ 90 (309)
++.|..+.+=.++.++.|+ -|...-..|++.+++|.|..+.+...+....+..+ +++...+.||+.||++++...+++
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lF 88 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALF 88 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH
Confidence 3345444443444455554 56666666999999999999999998888888877 779999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 91 FIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 91 ~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
.+|-.+.++ +++++.+.+...+.|...+.+.........+.-| +||+.++|++.++..++..+..|+-. ++
T Consensus 89 i~~n~l~al-------Ap~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt-~i 160 (394)
T COG2814 89 IVSNLLSAL-------APSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGT-FL 160 (394)
T ss_pred HHHHHHHHH-------hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHH-HH
Confidence 999887765 2589999999999999999998888999999999 78999999998888888888888755 34
Q ss_pred cC--ChHHHHHHHHHHHH
Q 021692 170 AP--DHANLIFMVAVGPA 185 (309)
Q Consensus 170 ~~--~~~~~~l~la~~~~ 185 (309)
++ +|+.-++.++.+.+
T Consensus 161 g~~~GWR~~F~~ia~l~l 178 (394)
T COG2814 161 GQLFGWRATFLAIAVLAL 178 (394)
T ss_pred HHHhhHHHHHHHHHHHHH
Confidence 33 34444444555443
No 68
>TIGR00898 2A0119 cation transport protein.
Probab=99.22 E-value=4.6e-11 Score=118.21 Aligned_cols=159 Identities=16% Similarity=0.159 Sum_probs=118.4
Q ss_pred hhhhHHhhHHHHHHhhCCC---HHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 021692 31 IGYLFGSISPVIKSSLNYN---QKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAP 106 (309)
Q Consensus 31 ~~Y~fsvys~~l~~~lg~s---~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~ 106 (309)
..|.++.+.+.+++++|++ ..+.+.+.+...++..+ +++.|++.||+|+|+++.++.++..++.++..+ .
T Consensus 104 ~~~~~~~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~--~---- 177 (505)
T TIGR00898 104 WEYSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAF--S---- 177 (505)
T ss_pred cEecCCcccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH--c----
Confidence 4455556778899999999 88889888888888887 569999999999999999999888877665543 1
Q ss_pred ChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccCChHHHHHHHHHHHH
Q 021692 107 VLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPA 185 (309)
Q Consensus 107 ~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~~~~~~~l~la~~~~ 185 (309)
++++.+.+...+.|.+.+.........+.+++| ++|+.+.++...+.++|..+.+. ...++.+ ++..++..++ +.
T Consensus 178 -~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~-~~~~~~~-wr~~~~~~~i-~~ 253 (505)
T TIGR00898 178 -PNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPL-VAYFIPD-WRWLQLAVSL-PT 253 (505)
T ss_pred -ccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHH-HHHHhhH-HHHHHHHHHH-HH
Confidence 368888888888999988888888889999999 56999999987777777665544 4444444 4444434443 33
Q ss_pred HHHHHHHhhcccCC
Q 021692 186 MVVIALMFIIRPVG 199 (309)
Q Consensus 186 ~v~l~~~~~ir~~p 199 (309)
++..+..+++++.|
T Consensus 254 ~~~~~~~~~~~esp 267 (505)
T TIGR00898 254 FLFFLLSWFVPESP 267 (505)
T ss_pred HHHHHHHHhcCCCh
Confidence 44444456666554
No 69
>PRK09952 shikimate transporter; Provisional
Probab=99.20 E-value=7.8e-10 Score=108.27 Aligned_cols=145 Identities=12% Similarity=0.022 Sum_probs=99.5
Q ss_pred cchHHHHHHHHHHHHHhhh-hhhHHhhHHH-HHHhh--CCCHHHHHHHHH-----HHHHHhhh-hhhhhhhccccchHHH
Q 021692 13 NNRWLVFVAAMWIQSCAGI-GYLFGSISPV-IKSSL--NYNQKQIARLGV-----AKDLGDSV-GFLAGSLCEVLPIWGA 82 (309)
Q Consensus 13 ~~rw~~l~~~~l~~~~~g~-~Y~fsvys~~-l~~~l--g~s~~~~~~i~~-----~~~vg~~~-~~~~G~L~Dr~Gpr~v 82 (309)
.+||+.+..+.+.....+. ...++...+. +++++ +.++.+ +.+.+ ...++..+ +++.|++.||+|||++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~ 96 (438)
T PRK09952 18 SRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRM 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHH
Confidence 4566666655555555443 3445555554 45555 677663 44332 22233444 4588999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCChhHH--------HHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhh
Q 021692 83 LLVGALQNFIGYGWVWLIVTGRAPVLPLW--------AMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGF 153 (309)
Q Consensus 83 llig~~l~~~gy~l~~l~~~~~i~~~s~~--------~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~ 153 (309)
+.++.++..++..+..++ . +++ .+.+...+.|.+.+..++++.....||+| ++||...+....+
T Consensus 97 l~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g 169 (438)
T PRK09952 97 LMLTVWMMGIATALIGLL--P-----SFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVG 169 (438)
T ss_pred HHHHHHHHHHHHHHHhcC--C-----cHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHH
Confidence 999998888877665442 2 333 45566778899998888888888999999 6799999998888
Q ss_pred hhhhHHHHHHHH
Q 021692 154 AGLGGAILTQVY 165 (309)
Q Consensus 154 ~GLg~ai~~~i~ 165 (309)
.++|..+...+.
T Consensus 170 ~~~G~~l~~~~~ 181 (438)
T PRK09952 170 YGVGLLLSTGLV 181 (438)
T ss_pred HHHHHHHHHHHH
Confidence 888877765543
No 70
>PRK15075 citrate-proton symporter; Provisional
Probab=99.19 E-value=7.4e-10 Score=108.04 Aligned_cols=142 Identities=9% Similarity=-0.033 Sum_probs=97.9
Q ss_pred cchHHHHHHHHHHHHHhhh-hhhHHhhHHHHHHhhCCCHHHHHHH-HHHHHHHh-----hh-hhhhhhhccccchHHHHH
Q 021692 13 NNRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARL-GVAKDLGD-----SV-GFLAGSLCEVLPIWGALL 84 (309)
Q Consensus 13 ~~rw~~l~~~~l~~~~~g~-~Y~fsvys~~l~~~lg~s~~~~~~i-~~~~~vg~-----~~-~~~~G~L~Dr~Gpr~vll 84 (309)
.+||+.....++..++... ...++.+.|.++++++.++.+.... .+....+. .+ +++.|++.||+|||++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~ 90 (434)
T PRK15075 11 ESKARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLI 90 (434)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHH
Confidence 3456654444444455444 4567888899999999988775433 22222222 23 458899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCChhHH--------HHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhh
Q 021692 85 VGALQNFIGYGWVWLIVTGRAPVLPLW--------AMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAG 155 (309)
Q Consensus 85 ig~~l~~~gy~l~~l~~~~~i~~~s~~--------~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~G 155 (309)
++.++..++..+..+ .. +++ .+.+...+.|.+.+...++......+|+| ++||.++++......
T Consensus 91 ~~~~~~~~~~~l~~~--~~-----~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~ 163 (434)
T PRK15075 91 VTLSIMASGTLLIAF--VP-----GYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQ 163 (434)
T ss_pred HHHHHHHHHHHHHHh--CC-----cHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHH
Confidence 999988887766543 22 343 34556677888888777777788899999 779999999776665
Q ss_pred hhHHHH
Q 021692 156 LGGAIL 161 (309)
Q Consensus 156 Lg~ai~ 161 (309)
+|..+.
T Consensus 164 ~g~~~g 169 (434)
T PRK15075 164 VAVVFA 169 (434)
T ss_pred HHHHHH
Confidence 554443
No 71
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.18 E-value=2.1e-09 Score=106.78 Aligned_cols=126 Identities=10% Similarity=-0.001 Sum_probs=98.1
Q ss_pred hHHHHHHh--hCCCHHHHHHHHHHHHHHhhh-hhhhhhhccc-cchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHH
Q 021692 38 ISPVIKSS--LNYNQKQIARLGVAKDLGDSV-GFLAGSLCEV-LPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAM 113 (309)
Q Consensus 38 ys~~l~~~--lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr-~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l 113 (309)
....++++ +|+|+.+.+.+.....++..+ .+++|+++|| +|+|+++.++.++..+|+.++.+ . ++++.+
T Consensus 33 L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~--~-----~~~~~~ 105 (475)
T TIGR00924 33 LAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAM--S-----IYPDLI 105 (475)
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHh--c-----ccHhHH
Confidence 33446776 999999999987777776666 5589999999 89999999999999999877654 1 135556
Q ss_pred HHHHHHHHhchhhhhhhHHHHHhhhcCC----CCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 114 CILIFVGNNGETYFNTAALVSCVQNFPK----SRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 114 ~~~~~l~g~g~~~~~~~~~~~~~~~FP~----~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
.+...+.+.|.+...+.......++||+ +|+.+.++......+|+++.+.+...+.+
T Consensus 106 ~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~ 166 (475)
T TIGR00924 106 FYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAE 166 (475)
T ss_pred HHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHH
Confidence 5556667788888777777888899983 38899998887888898888777665544
No 72
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.18 E-value=7.1e-09 Score=112.23 Aligned_cols=128 Identities=12% Similarity=0.022 Sum_probs=94.0
Q ss_pred hhHHHHHHhhCCCHHH--HHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHH
Q 021692 37 SISPVIKSSLNYNQKQ--IARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAM 113 (309)
Q Consensus 37 vys~~l~~~lg~s~~~--~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l 113 (309)
+..+.+...++.+++. .+++.++..++..+ ++++|+++||+|+|++++++.++..++..+..+.... .++|.+
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~----~~~~~l 106 (1146)
T PRK08633 31 LIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYL----GWFWLA 106 (1146)
T ss_pred HHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHH----ccHHHH
Confidence 4445566667776554 45555555566655 6799999999999999999887766554444333221 257888
Q ss_pred HHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHH
Q 021692 114 CILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMI 168 (309)
Q Consensus 114 ~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~ 168 (309)
++..++.|.+.+...++....+.+++| ++||.+.|+..+...+|.++.+.+...+
T Consensus 107 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l 162 (1146)
T PRK08633 107 FAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFL 162 (1146)
T ss_pred HHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 888888888899888888889999999 6799999999888888877766654443
No 73
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.15 E-value=3.4e-09 Score=103.31 Aligned_cols=165 Identities=11% Similarity=0.016 Sum_probs=87.8
Q ss_pred hhhhhHHhhHHH-HHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 021692 30 GIGYLFGSISPV-IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPV 107 (309)
Q Consensus 30 g~~Y~fsvys~~-l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~ 107 (309)
...|.+..|.|. +++++|++..+.+...+...++..+ +++.|++.||+|+|+++.++.++..+....+.......
T Consensus 257 ~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~--- 333 (432)
T PRK10406 257 LCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNV--- 333 (432)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcC---
Confidence 345666667665 4677899998887766554444444 66889999999999988877665443222121111111
Q ss_pred hhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHcc--CChHHHHHHHHHHH
Q 021692 108 LPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA--PDHANLIFMVAVGP 184 (309)
Q Consensus 108 ~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~--~~~~~~~l~la~~~ 184 (309)
.+.+.......+...+.+...........++|| ++||++.|+......+.....++....+++ +++...+++. ...
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~-~~~ 412 (432)
T PRK10406 334 SSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYV-TLM 412 (432)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHH-HHH
Confidence 122222222222222222332334455679999 569999999544322211112444333443 2233333333 334
Q ss_pred HHHHHHHHhhcccC
Q 021692 185 AMVVIALMFIIRPV 198 (309)
Q Consensus 185 ~~v~l~~~~~ir~~ 198 (309)
.++++++.++++++
T Consensus 413 ~~i~~~~~~~l~~~ 426 (432)
T PRK10406 413 AVVAFLVSLMLHRK 426 (432)
T ss_pred HHHHHHHHHHhhhc
Confidence 44555565666543
No 74
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.15 E-value=6.3e-09 Score=98.11 Aligned_cols=127 Identities=13% Similarity=-0.045 Sum_probs=90.8
Q ss_pred hHHHHHHhhCCCHHHHHHHHHHHHHHhhhhhhhhhhcccc-----chHHHH-HHHHHHHHHHHHHHHHHHhCCCCChhHH
Q 021692 38 ISPVIKSSLNYNQKQIARLGVAKDLGDSVGFLAGSLCEVL-----PIWGAL-LVGALQNFIGYGWVWLIVTGRAPVLPLW 111 (309)
Q Consensus 38 ys~~l~~~lg~s~~~~~~i~~~~~vg~~~~~~~G~L~Dr~-----Gpr~vl-lig~~l~~~gy~l~~l~~~~~i~~~s~~ 111 (309)
-.|.+.+++|+|.+|++..++.. +...+.++.|.+.||+ |+|+.. +.+.+...+.....+. ... ..++|
T Consensus 10 ~~~~~~~~~g~s~~~~g~~~~~~-~~~~~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~--~~~--~~~l~ 84 (356)
T TIGR00901 10 TLPYWLRSKNVSLKTIGFFSLVG-LPYSLKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSF--LVP--STDLP 84 (356)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHH-HHHHHHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHc--CCc--chhHH
Confidence 34677888999999999987653 3334578999999998 888874 5555555555434332 211 12566
Q ss_pred HHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 112 AMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 112 ~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
.+.....+.+.+.+..+.+....+.+++| ++|+.+.|+...+..+|..+.+.+...+.
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~ 143 (356)
T TIGR00901 85 LLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLA 143 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66666556666777777788888889998 77999999998888888888777665443
No 75
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.14 E-value=1.8e-10 Score=114.19 Aligned_cols=153 Identities=12% Similarity=0.099 Sum_probs=127.2
Q ss_pred HHhhCCCHHHHHHHHHHHHHHhhhhh-hhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHH
Q 021692 43 KSSLNYNQKQIARLGVAKDLGDSVGF-LAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGN 121 (309)
Q Consensus 43 ~~~lg~s~~~~~~i~~~~~vg~~~~~-~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g 121 (309)
+.+++||+.|-+.+.+....|..++. ++|+++||+|.|+++..+.++..++.++.-++..- ++|.+++...+.|
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~-----~~~~~~~~R~lqG 139 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASI-----GFYLLLVLRFLQG 139 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHh-----cchhhHHHHHHhH
Confidence 34799999999999888889998855 89999999999999999999999888887766543 4667777888999
Q ss_pred hchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHHhhccc
Q 021692 122 NGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP---DHANLIFMVAVGPAMVVIALMFIIRP 197 (309)
Q Consensus 122 ~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~---~~~~~~l~la~~~~~v~l~~~~~ir~ 197 (309)
++.+..+++.-....+|+| ++|++..+++.++..+|..+.-|+...+.+. +++.|. +.|++..+.+++..++.+|
T Consensus 140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY-~~g~~g~i~~~~w~~~~~d 218 (466)
T KOG2532|consen 140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFY-VFGIVGLIWFILWFLFYSD 218 (466)
T ss_pred HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHH-HHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999 7799999999999999999888887766644 555555 4566777778888888887
Q ss_pred CCCC
Q 021692 198 VGGH 201 (309)
Q Consensus 198 ~p~~ 201 (309)
.|.+
T Consensus 219 ~P~~ 222 (466)
T KOG2532|consen 219 SPSK 222 (466)
T ss_pred Cccc
Confidence 6643
No 76
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.13 E-value=5e-09 Score=100.77 Aligned_cols=158 Identities=11% Similarity=0.054 Sum_probs=96.5
Q ss_pred hhhHHhhHH-HHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChh
Q 021692 32 GYLFGSISP-VIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (309)
Q Consensus 32 ~Y~fsvys~-~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s 109 (309)
.+.+..+.| .+++++|+++.+.+.+.....++..+ .++.|++.||+|+|+.+..+.+...+.+.... ..+ +
T Consensus 232 ~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~--~~~-----~ 304 (393)
T PRK15011 232 NSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGML--MAH-----S 304 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH--HHh-----h
Confidence 333444444 45788999999888775554444444 56899999999999988877665554433322 122 3
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHHHHH
Q 021692 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAMVV 188 (309)
Q Consensus 110 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~~v~ 188 (309)
.+.+.....+.+.+.+...+.......+.+|++||.+.|+......+|+++.+.+...+.+. ++...+ ..+....+++
T Consensus 305 ~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~-~~~~~~~~~~ 383 (393)
T PRK15011 305 PAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVF-WFALVMIIAT 383 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH-HHHHHHHHHH
Confidence 44433344444444444444444556789999999999998777778877776665544443 233222 3344444555
Q ss_pred HHHHhhccc
Q 021692 189 IALMFIIRP 197 (309)
Q Consensus 189 l~~~~~ir~ 197 (309)
++..+++|+
T Consensus 384 ~~~~~~~~~ 392 (393)
T PRK15011 384 LFCLLRIKD 392 (393)
T ss_pred HHHHHhhcC
Confidence 555556553
No 77
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.11 E-value=4.3e-08 Score=94.32 Aligned_cols=155 Identities=10% Similarity=0.094 Sum_probs=88.6
Q ss_pred HhhHHHHHHhhCCCHHHHHHHHHHH-HHHhhhhhhhhhhccccchHHHHHH-HHHHHHHHHHHHHHHHhCCCCChhHHHH
Q 021692 36 GSISPVIKSSLNYNQKQIARLGVAK-DLGDSVGFLAGSLCEVLPIWGALLV-GALQNFIGYGWVWLIVTGRAPVLPLWAM 113 (309)
Q Consensus 36 svys~~l~~~lg~s~~~~~~i~~~~-~vg~~~~~~~G~L~Dr~Gpr~vlli-g~~l~~~gy~l~~l~~~~~i~~~s~~~l 113 (309)
+.....+++++|+|.++++.+.+.. ..+..++.+.|...||+|+|+.+++ +.+...++..++.+ . +++|.+
T Consensus 36 p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~~~~~~~~--~-----~~~~~l 108 (393)
T PRK15011 36 PTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTLFAW--N-----RNYFVL 108 (393)
T ss_pred HHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHH--h-----hHHHHH
Confidence 4444558999999999999985544 4455666654444999999987554 44444455544432 2 256665
Q ss_pred HHHH-HHHHhchhhhhhhHHHHHhhhcCCCCCcc----hhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHHHH
Q 021692 114 CILI-FVGNNGETYFNTAALVSCVQNFPKSRGPV----VGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAMV 187 (309)
Q Consensus 114 ~~~~-~l~g~g~~~~~~~~~~~~~~~FP~~RG~a----vGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~~v 187 (309)
.+.. .+.+.+ +... +......++++++||+. .++..++..+|.++.+++...+.+. +++.-++..++..++.
T Consensus 109 ~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~ 186 (393)
T PRK15011 109 LFVGVFLSSFG-STAN-PQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVC 186 (393)
T ss_pred HHHHHHHHHHH-HhhH-HHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence 4433 333332 3333 33444444554444443 3566666778888887776655442 4444344455555444
Q ss_pred HHHHHhhcccCC
Q 021692 188 VIALMFIIRPVG 199 (309)
Q Consensus 188 ~l~~~~~ir~~p 199 (309)
+++...++|+.+
T Consensus 187 ~~~~~~~~~~~~ 198 (393)
T PRK15011 187 GVMVWLFLPSMR 198 (393)
T ss_pred HHHHHhhcCccC
Confidence 555555666654
No 78
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.11 E-value=2.9e-09 Score=103.13 Aligned_cols=158 Identities=15% Similarity=0.170 Sum_probs=92.1
Q ss_pred hHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHH-HHhCCCCChhHH
Q 021692 34 LFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWL-IVTGRAPVLPLW 111 (309)
Q Consensus 34 ~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l-~~~~~i~~~s~~ 111 (309)
.++.+...+++++|+|+.+.+.+.+...++..+ .++.|++.||+|+|++++++.....++...+.. ... +.+
T Consensus 29 ~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~------~~~ 102 (420)
T PRK09528 29 WFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFA------PLL 102 (420)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHH------HHH
Confidence 355666678989999999999998877777766 779999999999999998876655543321111 111 111
Q ss_pred H--HHHHHHHHHhchhhhhhhH---HHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHccCChHHHHHHHHHHHHH
Q 021692 112 A--MCILIFVGNNGETYFNTAA---LVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAM 186 (309)
Q Consensus 112 ~--l~~~~~l~g~g~~~~~~~~---~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~~~~~~~l~la~~~~~ 186 (309)
. ......+++...+....+. .....+.++++||.+.|......++|.++.+++...+.+.+++.-++..++. .+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~~~-~~ 181 (420)
T PRK09528 103 QYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGSGS-AL 181 (420)
T ss_pred HHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHHHH-HH
Confidence 1 1111112222122222121 2222345567789999998888889998888776555443333222233332 23
Q ss_pred HHHHHHhhcccC
Q 021692 187 VVIALMFIIRPV 198 (309)
Q Consensus 187 v~l~~~~~ir~~ 198 (309)
++++..++++++
T Consensus 182 ~~~~~~~~~~~~ 193 (420)
T PRK09528 182 ILLVLLFFAKPD 193 (420)
T ss_pred HHHHHHhccccc
Confidence 344444444433
No 79
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.08 E-value=8.2e-08 Score=92.52 Aligned_cols=166 Identities=10% Similarity=-0.038 Sum_probs=111.0
Q ss_pred HhhhhhhHHhhH-HHHHHhhCCCHHHHHHHHHHHHHHhhhhhhhhhhcccc-----chHH-HHHHHHHHHHHHHHHHHHH
Q 021692 28 CAGIGYLFGSIS-PVIKSSLNYNQKQIARLGVAKDLGDSVGFLAGSLCEVL-----PIWG-ALLVGALQNFIGYGWVWLI 100 (309)
Q Consensus 28 ~~g~~Y~fsvys-~~l~~~lg~s~~~~~~i~~~~~vg~~~~~~~G~L~Dr~-----Gpr~-vllig~~l~~~gy~l~~l~ 100 (309)
.-|..|.|..-. |.+-++.|+|.+|++.+...... ..+.++.|.+.||+ |+|+ .+.++.+...++..+..+.
T Consensus 10 ~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~ 88 (402)
T PRK11902 10 ASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA-YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFC 88 (402)
T ss_pred HHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhc
Confidence 345555554333 55555679999999988665544 45688999999999 7765 6777777776666554432
Q ss_pred HhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC--ChHHHH
Q 021692 101 VTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP--DHANLI 177 (309)
Q Consensus 101 ~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~--~~~~~~ 177 (309)
.. ..++|.+.+...+.+...+..+.+.-....+++| ++|+.+.++...++++|..+.+.+...+.+. +++.-+
T Consensus 89 --~~--~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f 164 (402)
T PRK11902 89 --PP--HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTY 164 (402)
T ss_pred --Cc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHH
Confidence 21 1257777666666666677788888888899999 5599999999988888888887766655542 344444
Q ss_pred HHHHHHHHHHHHHHHhhcccCC
Q 021692 178 FMVAVGPAMVVIALMFIIRPVG 199 (309)
Q Consensus 178 l~la~~~~~v~l~~~~~ir~~p 199 (309)
.+.++..++ +.+..+++++|+
T Consensus 165 ~i~a~~~l~-~~l~~~~~~e~~ 185 (402)
T PRK11902 165 LLMAGLMLA-GALTTLWAPEPE 185 (402)
T ss_pred HHHHHHHHH-HHHHHHhcCCCc
Confidence 444544433 333344555553
No 80
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.08 E-value=5.7e-09 Score=101.06 Aligned_cols=160 Identities=9% Similarity=0.048 Sum_probs=102.5
Q ss_pred HHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHH
Q 021692 35 FGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAM 113 (309)
Q Consensus 35 fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l 113 (309)
++.|..+...+.+.+..+.+.+.+...++..+ .++.|++.||+|+|+.+.++.++..+++.++.+ .+ +.|.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~--~~-----~~~~~ 318 (420)
T PRK09528 246 FPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGF--AT-----GPLEV 318 (420)
T ss_pred HHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHh--cc-----cHHHH
Confidence 44444333333467777777776666666555 558999999999999999988888877766543 22 45655
Q ss_pred HHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhh-hhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHHHHHHH
Q 021692 114 CILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGI-LKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAMVVIA 190 (309)
Q Consensus 114 ~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi-~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~~v~l~ 190 (309)
.....+.+.+.+...........+++| +.|+++.+. .....++|+++.+++...+.+. +++.-++..+++.++..++
T Consensus 319 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~ 398 (420)
T PRK09528 319 SILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLI 398 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHH
Confidence 555556666665555556666778999 558877655 3344568888887776655543 3333344455555555555
Q ss_pred HHhhcccCCCC
Q 021692 191 LMFIIRPVGGH 201 (309)
Q Consensus 191 ~~~~ir~~p~~ 201 (309)
...++|+++..
T Consensus 399 ~~~~~~~~~~~ 409 (420)
T PRK09528 399 SVFTLSGDREL 409 (420)
T ss_pred HHHHhcCCchh
Confidence 56666665543
No 81
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.08 E-value=1e-08 Score=98.26 Aligned_cols=133 Identities=15% Similarity=0.108 Sum_probs=94.2
Q ss_pred hhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhH
Q 021692 32 GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPL 110 (309)
Q Consensus 32 ~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~ 110 (309)
.|.+..|.|.+.++.|++..+.+.+.....++..+ .++.|++.||+|+|+.+.++.+...+++..+.. .. +.
T Consensus 236 ~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~--~~-----~~ 308 (406)
T PRK11551 236 LYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAA--AP-----SF 308 (406)
T ss_pred HHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh--cC-----cH
Confidence 44455566777667899998888877666666666 568999999999999988766655555444322 11 34
Q ss_pred HHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC
Q 021692 111 WAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP 171 (309)
Q Consensus 111 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~ 171 (309)
+.+.+...+.|.+.+..++.......+.+| ++||++.|+.....++|+++.+.+...+.+.
T Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 370 (406)
T PRK11551 309 AGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLAL 370 (406)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhcc
Confidence 444444444554444455566677789999 6699999999999989988888777766653
No 82
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.07 E-value=4.8e-09 Score=102.30 Aligned_cols=159 Identities=11% Similarity=0.120 Sum_probs=103.2
Q ss_pred hhHHHHHHhhCCCH--------HHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 021692 37 SISPVIKSSLNYNQ--------KQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPV 107 (309)
Q Consensus 37 vys~~l~~~lg~s~--------~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~ 107 (309)
.|.+...++.|+++ ++.+...+...+...+ .++.|++.||+|+|+++.++.++..+++.++... ... .
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~-~~~--~ 305 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYG-DPE--Y 305 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc-Ccc--h
Confidence 34444444556554 4445555555555555 4589999999999999999999888776555431 111 0
Q ss_pred hhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhh-hhhhhhHHHHHHHHHHHccC-------ChHHHHH
Q 021692 108 LPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILK-GFAGLGGAILTQVYTMIHAP-------DHANLIF 178 (309)
Q Consensus 108 ~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~-~~~GLg~ai~~~i~~~~~~~-------~~~~~~l 178 (309)
.+++.+.+..++.|.+.+..+......+.+++| ++||++.|+.. ...++|+++.+.+...+++. +++.-++
T Consensus 306 ~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~ 385 (418)
T TIGR00889 306 FGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWL 385 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHH
Confidence 124555555666666667777677777889999 66999999986 56778888877766555432 1333233
Q ss_pred HHHHHHHHHHHHHHhhcccC
Q 021692 179 MVAVGPAMVVIALMFIIRPV 198 (309)
Q Consensus 179 ~la~~~~~v~l~~~~~ir~~ 198 (309)
..++...+.+++..+++|++
T Consensus 386 ~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 386 FFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHHHHhCCc
Confidence 45555555566667777755
No 83
>PRK03545 putative arabinose transporter; Provisional
Probab=99.07 E-value=1.5e-08 Score=97.15 Aligned_cols=154 Identities=10% Similarity=0.071 Sum_probs=93.9
Q ss_pred HHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHH
Q 021692 40 PVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIF 118 (309)
Q Consensus 40 ~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~ 118 (309)
+.+++++|+|+.+.+.+.....++..+ .++.|++.||+|+|++ .++......+..+... .. ++.+.+++...
T Consensus 230 ~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~-~~~~~~~~~~~~~l~~-~~-----~~~~~~~~~~~ 302 (390)
T PRK03545 230 PFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFL-LIAIALLLVCLLLLLP-AA-----NSEWHLSVLSI 302 (390)
T ss_pred HHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH-HHHHHHHHHHHHHHHH-Hh-----chHHHHHHHHH
Confidence 445777899998888876666666655 5589999999998765 4444444444333221 11 14555555555
Q ss_pred HHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHHHHHHHHHhhccc
Q 021692 119 VGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAMVVIALMFIIRP 197 (309)
Q Consensus 119 l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~~v~l~~~~~ir~ 197 (309)
+.|.+.+...........+..|++||.+.|+..+...+|.++.+.+...+.+. +.+..+...+++..+-.+......|+
T Consensus 303 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
T PRK03545 303 FWGIAIMCIGLAMQVKVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFRR 382 (390)
T ss_pred HHHHHHhcchHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHccc
Confidence 55555444444444556678899999999988777767877776665555544 33333344444443333344555555
Q ss_pred CCC
Q 021692 198 VGG 200 (309)
Q Consensus 198 ~p~ 200 (309)
+|.
T Consensus 383 ~~~ 385 (390)
T PRK03545 383 FPV 385 (390)
T ss_pred cch
Confidence 543
No 84
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.07 E-value=2.2e-08 Score=94.54 Aligned_cols=133 Identities=14% Similarity=0.121 Sum_probs=95.5
Q ss_pred hhhHHhhHHH-HHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChh
Q 021692 32 GYLFGSISPV-IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (309)
Q Consensus 32 ~Y~fsvys~~-l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s 109 (309)
.+.+..+.|. +++++|+++.+.+.+.....++..+ +++.|++.||+|+|+.+.++..+..++..++....... .++
T Consensus 222 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 299 (385)
T TIGR00710 222 FFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILG--LGS 299 (385)
T ss_pred HHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhc--cch
Confidence 4444445554 4678999999998887766666666 56899999999999999988887777766655432211 113
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHH
Q 021692 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYT 166 (309)
Q Consensus 110 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~ 166 (309)
.+.+.....+.|.|.+...........+.+|++||.+.++.......++++.+++..
T Consensus 300 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 300 WAMIIGPMMFVGIGNSMISSIAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444455566677777777777778889999999999987777677778888766
No 85
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.05 E-value=2.9e-08 Score=93.26 Aligned_cols=132 Identities=13% Similarity=0.047 Sum_probs=89.1
Q ss_pred hhhHHhhHHHHHHhhCC--CHHHHHHHHHHHHHH-----hhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhC
Q 021692 32 GYLFGSISPVIKSSLNY--NQKQIARLGVAKDLG-----DSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTG 103 (309)
Q Consensus 32 ~Y~fsvys~~l~~~lg~--s~~~~~~i~~~~~vg-----~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~ 103 (309)
.|.++...+.+++++.+ +..+.+.+.+....+ ..+ +++.|++.||+|+|+++.++.++..++..+..+. .
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--~ 86 (394)
T TIGR00883 9 FYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLL--P 86 (394)
T ss_pred HHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhC--C
Confidence 45566666777777554 344444443322222 123 4689999999999999999999988887766542 2
Q ss_pred CCCChh---HHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHH
Q 021692 104 RAPVLP---LWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVY 165 (309)
Q Consensus 104 ~i~~~s---~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~ 165 (309)
...... .+.+.+...+.|.+.+...++....+.+++| ++||...++...+..+|..+.+.+.
T Consensus 87 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~ 152 (394)
T TIGR00883 87 SYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTV 152 (394)
T ss_pred ChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 110001 1234555667788888777778888899998 6799999998888888877776543
No 86
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.05 E-value=1.1e-07 Score=94.75 Aligned_cols=159 Identities=12% Similarity=0.003 Sum_probs=107.2
Q ss_pred HhhHHHHHHhhCCCHHHHHHHHHHHHHHhhhhhhhhhhcccc-----chHHH-HHHHHHHHHHHHHHHHHHHhCCCCChh
Q 021692 36 GSISPVIKSSLNYNQKQIARLGVAKDLGDSVGFLAGSLCEVL-----PIWGA-LLVGALQNFIGYGWVWLIVTGRAPVLP 109 (309)
Q Consensus 36 svys~~l~~~lg~s~~~~~~i~~~~~vg~~~~~~~G~L~Dr~-----Gpr~v-llig~~l~~~gy~l~~l~~~~~i~~~s 109 (309)
+-..|...++.|.|.++++..+..... ..+.++.|.+.||+ |+|+. ++++.+...++..+.+.. .. ..+
T Consensus 32 ~~~l~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~--~~--~~~ 106 (491)
T PRK11010 32 SGTLQAWMTVENIDLKTIGFFSLVGQA-YVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFL--EP--GTQ 106 (491)
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHc--CC--cch
Confidence 334466666779999998886443322 34577999999999 99886 556666665665554332 21 125
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHcc-C-ChHHHHHHHHHHHHH
Q 021692 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA-P-DHANLIFMVAVGPAM 186 (309)
Q Consensus 110 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~-~-~~~~~~l~la~~~~~ 186 (309)
++.+.....+.+.+.+..+.+......+||| ++||.+.|+...+..+|..+.+.+...+.+ . +++.-++..++.. +
T Consensus 107 l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~-l 185 (491)
T PRK11010 107 LRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALL-I 185 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHH-H
Confidence 7777766677777777888888888899999 779999999998888888888776665555 2 3444444445433 3
Q ss_pred HHHHHHhhcccCCC
Q 021692 187 VVIALMFIIRPVGG 200 (309)
Q Consensus 187 v~l~~~~~ir~~p~ 200 (309)
+..+..+++|+|+.
T Consensus 186 l~~l~~~~~~e~~~ 199 (491)
T PRK11010 186 PCIIATLLAPEPTD 199 (491)
T ss_pred HHHHHHHhcCCCcc
Confidence 34444455676653
No 87
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.05 E-value=1.1e-08 Score=98.98 Aligned_cols=153 Identities=15% Similarity=0.129 Sum_probs=103.2
Q ss_pred hhHHHH-HHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHH
Q 021692 37 SISPVI-KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMC 114 (309)
Q Consensus 37 vys~~l-~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~ 114 (309)
.+.|.+ ++.+|++..+.+.+.....++..+ +++.|++.||.++++.+..+.++..+++.++.+ . ++.+...
T Consensus 244 ~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~--~-----~~~~~~~ 316 (417)
T PRK10489 244 VLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGL--M-----PMWILAV 316 (417)
T ss_pred HhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHc--c-----chHHHHH
Confidence 344444 555999998888887766677666 558999999988888888888777777655432 1 2455555
Q ss_pred HHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHHHHHHHHH
Q 021692 115 ILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAMVVIALM 192 (309)
Q Consensus 115 ~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~~v~l~~~ 192 (309)
+...+.|.+.+...+.....+.+.+| ++||++.|+......+|.++.+.+...+.+. +....++..++...+++++..
T Consensus 317 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 396 (417)
T PRK10489 317 LCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLL 396 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Confidence 55566666666666666667789999 5599999998877777887777776655543 333334444555444555544
Q ss_pred hhcc
Q 021692 193 FIIR 196 (309)
Q Consensus 193 ~~ir 196 (309)
..++
T Consensus 397 ~~~~ 400 (417)
T PRK10489 397 LVLG 400 (417)
T ss_pred Hhcc
Confidence 4443
No 88
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.05 E-value=1.3e-07 Score=90.84 Aligned_cols=149 Identities=9% Similarity=-0.036 Sum_probs=82.4
Q ss_pred hhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHH-HHhCCCCChhHHHHH
Q 021692 37 SISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWL-IVTGRAPVLPLWAMC 114 (309)
Q Consensus 37 vys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l-~~~~~i~~~s~~~l~ 114 (309)
.+...+++++|+|..+.+.+.+...+...+ .++.|++.||+|+|++++.+.+...+++..+.. ..........++..+
T Consensus 24 ~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (396)
T TIGR00882 24 FFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAI 103 (396)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 333456888999999999988777777766 679999999999999998876665544333221 111100000122222
Q ss_pred HHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHccCChHHHHHHHHHHHHH
Q 021692 115 ILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAM 186 (309)
Q Consensus 115 ~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~~~~~~~l~la~~~~~ 186 (309)
+...+.+.+.+...+... .......++++...|...+...+|.++.+.+...+.+.+++..+...++...+
T Consensus 104 ~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~~~~~~~~ 174 (396)
T TIGR00882 104 VGGLYLGFVFSAGAGAIE-AYIEKVSRNSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWLGSGFALI 174 (396)
T ss_pred HHHHHHHHHhccchhhHH-HHHHHhhhhcccccchhhhhcccHHHHHHHHHhhhhccCchHHHHHHHHHHHH
Confidence 222233333322222221 11122234456666777777778888877764433333444333333444433
No 89
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.05 E-value=2.1e-08 Score=96.82 Aligned_cols=163 Identities=13% Similarity=0.072 Sum_probs=98.7
Q ss_pred hhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHH-HHHHHHHHHHHHHHHHHhCCCCC
Q 021692 30 GIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALL-VGALQNFIGYGWVWLIVTGRAPV 107 (309)
Q Consensus 30 g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vll-ig~~l~~~gy~l~~l~~~~~i~~ 107 (309)
...|.+..|.|.+.+++|++..+.+.+.....++..+ .+..|++.||+|+|+... .+.+...++...+.+..... .
T Consensus 236 ~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--~ 313 (402)
T TIGR00897 236 IGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHF--G 313 (402)
T ss_pred HHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHcc--C
Confidence 3456667777877777999999887766655566655 558999999999988754 33333333322222211110 1
Q ss_pred hhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHHH
Q 021692 108 LPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAM 186 (309)
Q Consensus 108 ~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~~ 186 (309)
.+.+...++..+.|.+.+.. .+......+.+|++||.+.|+......+|+.+.+.+...+++. +...-+.+.++. .+
T Consensus 314 ~~~~~~~~~~~~~G~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~-~~ 391 (402)
T TIGR00897 314 HSFAVALIIAIALGIFLAGY-VPLAAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAAL-YV 391 (402)
T ss_pred CcHHHHHHHHHHHHHHHHHH-HHHHHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHH-HH
Confidence 13455444444555544433 2334445678889999999999888889988877777666653 333222233332 33
Q ss_pred HHHHHHhhcc
Q 021692 187 VVIALMFIIR 196 (309)
Q Consensus 187 v~l~~~~~ir 196 (309)
++.+...|+|
T Consensus 392 i~~~~~~~~~ 401 (402)
T TIGR00897 392 VSAFLTAFIR 401 (402)
T ss_pred HHHHHHHHhc
Confidence 4445556666
No 90
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.04 E-value=2.5e-08 Score=108.50 Aligned_cols=179 Identities=9% Similarity=-0.016 Sum_probs=108.3
Q ss_pred cchHHHHHHHHHHH-HHhhh-hhhHHhhH-HHHHHhhCCCHHH-HHHHHHHHHHHhhh-hhhhhhhccccchHHHHHH--
Q 021692 13 NNRWLVFVAAMWIQ-SCAGI-GYLFGSIS-PVIKSSLNYNQKQ-IARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLV-- 85 (309)
Q Consensus 13 ~~rw~~l~~~~l~~-~~~g~-~Y~fsvys-~~l~~~lg~s~~~-~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vlli-- 85 (309)
.++|+.+..+.++. +.... ...+..+. ..+....+.+... .++..++..+...+ ++++|+++||+|+|+++.+
T Consensus 10 ~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~ 89 (1140)
T PRK06814 10 SRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILK 89 (1140)
T ss_pred ccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHH
Confidence 44566665554444 32222 22222222 2334444444444 34444445555544 7799999999999997533
Q ss_pred HHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHH
Q 021692 86 GALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQV 164 (309)
Q Consensus 86 g~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i 164 (309)
.+.....+..++.. .. .++|.+++..++.|.+.+++..+....+.+++| ++|+.+.|+..+..++|.++.+.+
T Consensus 90 ~~~~~~~~~~~~~~-~~-----~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l 163 (1140)
T PRK06814 90 FAEIGIAALAIYGF-HL-----NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTII 163 (1140)
T ss_pred HHHHHHHHHHHHHH-HH-----hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHH
Confidence 22222222212211 11 268888888889999999998899999999999 679999999999999998888777
Q ss_pred HHHHccC-ChHHHHHHHHHHHHHHHHHHHhhcccC
Q 021692 165 YTMIHAP-DHANLIFMVAVGPAMVVIALMFIIRPV 198 (309)
Q Consensus 165 ~~~~~~~-~~~~~~l~la~~~~~v~l~~~~~ir~~ 198 (309)
...+... ++..++ +.++...+++++..++++++
T Consensus 164 ~g~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 197 (1140)
T PRK06814 164 GGLATISGNFVILV-ALLMGIAVLGWLASLFIPKT 197 (1140)
T ss_pred HHHHHhccccHHHH-HHHHHHHHHHHHHHhhCCCC
Confidence 6655543 333333 33333334444444555443
No 91
>PRK09952 shikimate transporter; Provisional
Probab=99.03 E-value=2.7e-08 Score=97.40 Aligned_cols=163 Identities=9% Similarity=0.093 Sum_probs=94.1
Q ss_pred hhhhHHhhHHH-HHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCCh
Q 021692 31 IGYLFGSISPV-IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVL 108 (309)
Q Consensus 31 ~~Y~fsvys~~-l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~ 108 (309)
..|.+..|.+. +++.+|++..+...+.....+...+ .++.|++.||+|+|+++.++.++..++...+....... .
T Consensus 265 ~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~---~ 341 (438)
T PRK09952 265 TMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQ---S 341 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcC---C
Confidence 34555555554 4778899987655544433333344 45799999999999998888776655443333322221 1
Q ss_pred hHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhh-hhhhhHHHHHHHHHHHcc---CChHHHHHHHHHH
Q 021692 109 PLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKG-FAGLGGAILTQVYTMIHA---PDHANLIFMVAVG 183 (309)
Q Consensus 109 s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~-~~GLg~ai~~~i~~~~~~---~~~~~~~l~la~~ 183 (309)
+.+.+.....+.+.+.+...........+.|| ++|+++.|+... +..+|+++.+.+...+.+ +++...+.+++ .
T Consensus 342 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~-~ 420 (438)
T PRK09952 342 IFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLL-A 420 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHH-H
Confidence 34443333444455555555556667789999 569999988432 333666666655555443 22333232233 3
Q ss_pred HHHHHHHHHhhccc
Q 021692 184 PAMVVIALMFIIRP 197 (309)
Q Consensus 184 ~~~v~l~~~~~ir~ 197 (309)
..+++.++.+.+|+
T Consensus 421 ~~~i~~v~~~~~~~ 434 (438)
T PRK09952 421 GCLISAMTALLMKD 434 (438)
T ss_pred HHHHHHHHHHHccc
Confidence 33455555555654
No 92
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.03 E-value=1.7e-08 Score=95.13 Aligned_cols=148 Identities=16% Similarity=0.151 Sum_probs=94.3
Q ss_pred HHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHH
Q 021692 41 VIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFV 119 (309)
Q Consensus 41 ~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l 119 (309)
.+++++|.+..+.+.+.......... .++.|++.||+|+|+++.++.+...+.+..+.. . ++.|.+.....+
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~ 297 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAA--D-----NSLWALLMLQLL 297 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHH--H-----HHHHHHHHHHHH
Confidence 35778999998887765544333333 458999999999999988887765555544332 1 245555555555
Q ss_pred HHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHHHHHHHHHhhcc
Q 021692 120 GNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAMVVIALMFIIR 196 (309)
Q Consensus 120 ~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~~v~l~~~~~ir 196 (309)
.+.+.+...........+.+|++|+.+.|+......+|+++.+.+...+.+. +.+..+...++ ..+++.+...++|
T Consensus 298 ~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~ 374 (375)
T TIGR00899 298 NAIFIGILAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIV-MLIVALFCLLLIK 374 (375)
T ss_pred HHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHH-HHHHHHHHHheec
Confidence 5555666655566667789998889999998777778887777666555442 33333333333 2334444444443
No 93
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.01 E-value=7e-08 Score=92.84 Aligned_cols=138 Identities=13% Similarity=-0.025 Sum_probs=93.6
Q ss_pred hhhHHhhHHHH-HHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChh
Q 021692 32 GYLFGSISPVI-KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (309)
Q Consensus 32 ~Y~fsvys~~l-~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s 109 (309)
.+.+..+.|.+ ++.+|++..+.+.......++..+ .++.|++.||+|+|+.+.++.++..+|..++....... ..+
T Consensus 231 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~ 308 (406)
T PRK15402 231 LLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVIS--SHA 308 (406)
T ss_pred HHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcc--ccc
Confidence 34444455544 677999998887765544455555 45899999999999999999887777776665432111 113
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHccC
Q 021692 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAP 171 (309)
Q Consensus 110 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~ 171 (309)
++.+.+...+.+.|.+..++.........-|++||.+.++......+|.++.+.+....++.
T Consensus 309 ~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~ 370 (406)
T PRK15402 309 YLWLTAGLSLYAFGIGLANAGLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLG 370 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 44455555566667766655444444444568899999998888888888888777766554
No 94
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.01 E-value=2.1e-10 Score=111.67 Aligned_cols=180 Identities=14% Similarity=0.074 Sum_probs=133.1
Q ss_pred chHHHHHHHHHHHHHhhh-hhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHH
Q 021692 14 NRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNF 91 (309)
Q Consensus 14 ~rw~~l~~~~l~~~~~g~-~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~ 91 (309)
..|+.++.-.++.+.+=. -|+..--.+..++.+|.+.++.+++.+...++..+ +++.|++.||+-|+.++.+|..+-.
T Consensus 30 ~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~ 109 (493)
T KOG1330|consen 30 SPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWT 109 (493)
T ss_pred cchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHH
Confidence 334445444444444332 56665555888999999999999998877777655 8899999999999999999998887
Q ss_pred HHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHc-
Q 021692 92 IGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH- 169 (309)
Q Consensus 92 ~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~- 169 (309)
+..++.... ..+|++.+...+.|.|.+..++.+...+..+|| ++|+++.|+..-....|+.+.-.. ....
T Consensus 110 ~Av~~~~fs-------~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vv-gs~va 181 (493)
T KOG1330|consen 110 LAVFASGFS-------NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVV-GSVVA 181 (493)
T ss_pred HHHHHHHHH-------HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEe-eeeec
Confidence 776554432 269999999999999999999999999999999 679999999655544554443221 1111
Q ss_pred --cCChHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 021692 170 --APDHANLIFMVAVGPAMVVIALMFIIRPVGGH 201 (309)
Q Consensus 170 --~~~~~~~~l~la~~~~~v~l~~~~~ir~~p~~ 201 (309)
..+|+.-+...+++.++++++..+++|+|++.
T Consensus 182 ~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rg 215 (493)
T KOG1330|consen 182 SLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERG 215 (493)
T ss_pred cCccceEEEEEeehHHHHHHHHHHHhhccCcccc
Confidence 12244444567888888888889999999863
No 95
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.99 E-value=5.7e-08 Score=93.45 Aligned_cols=132 Identities=17% Similarity=0.172 Sum_probs=110.5
Q ss_pred HHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHH
Q 021692 35 FGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAM 113 (309)
Q Consensus 35 fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l 113 (309)
-.+..|++|+.+++|+.|.+++..+...+... ++++|++.+|+|.|+-++.|..++.+|..++|=+...+ ++..+
T Consensus 32 ~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~----~y~~F 107 (422)
T COG0738 32 NDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSK----SYGFF 107 (422)
T ss_pred chhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhh----hHHHH
Confidence 45778999999999999999998777666655 66999999999999999999999999999997543332 35555
Q ss_pred HHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 114 CILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 114 ~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
+...++.+.|.+...|+....+....| ++...=+.++.+++|+|+++.+.+...++.
T Consensus 108 L~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 108 LVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred HHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 556677888999999999999999999 456667889999999999999888777653
No 96
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.99 E-value=1.3e-08 Score=100.32 Aligned_cols=134 Identities=19% Similarity=0.085 Sum_probs=81.4
Q ss_pred hhhHHhhHH-HHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChh
Q 021692 32 GYLFGSISP-VIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (309)
Q Consensus 32 ~Y~fsvys~-~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s 109 (309)
.+.+..+.| .+++++|+|..+.+.......++..+ .+++|++.||+|+|+...++.....++..+..+.. . .+
T Consensus 274 ~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~-~----~~ 348 (467)
T PRK09556 274 RIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQH-A----TS 348 (467)
T ss_pred HHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHh-c----Cc
Confidence 344555666 45788999999988877766677666 55899999999999877665544443332222211 1 13
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhh-hHHHHHHHHHHHcc
Q 021692 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGL-GGAILTQVYTMIHA 170 (309)
Q Consensus 110 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GL-g~ai~~~i~~~~~~ 170 (309)
.+.+.+..++.|.+.............+++| ++||++.|+..+...+ |+++.+.+...+.+
T Consensus 349 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 349 EYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 4444333333332221111122234559999 5699999998776665 55666666655555
No 97
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.98 E-value=4.9e-08 Score=97.34 Aligned_cols=156 Identities=14% Similarity=0.216 Sum_probs=96.7
Q ss_pred hHHHHHHhhCCCHHHHHHHH-HHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHH-HHhCCCCChhHHHHH
Q 021692 38 ISPVIKSSLNYNQKQIARLG-VAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWL-IVTGRAPVLPLWAMC 114 (309)
Q Consensus 38 ys~~l~~~lg~s~~~~~~i~-~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l-~~~~~i~~~s~~~l~ 114 (309)
..+.+.+++|+|..+.+.+. ....++..+ .+++|++.||+|+|+.+.++.++..++...++. ...+ ++.+.+.
T Consensus 245 ~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~----~~~~~l~ 320 (491)
T PRK11010 245 TTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITD----KNLYSMG 320 (491)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc----ccHHHHH
Confidence 34556778999999999875 455556666 558999999999999888777665554444332 2222 1344443
Q ss_pred HHHHHHHhchhhhhhhHHHHHhhhcCC-CCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHHHHHHHHH
Q 021692 115 ILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAMVVIALM 192 (309)
Q Consensus 115 ~~~~l~g~g~~~~~~~~~~~~~~~FP~-~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~~v~l~~~ 192 (309)
....+.....++..++.....++..|+ .+|+..|+..+..++|..+.+++...+.+. ++...+.+.++ ..+.+++..
T Consensus 321 ~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~-~~l~~l~~~ 399 (491)
T PRK11010 321 AAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVA-AAVPGLLLL 399 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHH-HHHHHHHHH
Confidence 333332223334444556666778884 589999999888889988888776555442 34444433333 334455555
Q ss_pred hhcccC
Q 021692 193 FIIRPV 198 (309)
Q Consensus 193 ~~ir~~ 198 (309)
.++|+.
T Consensus 400 ~~~~~~ 405 (491)
T PRK11010 400 LVCRQT 405 (491)
T ss_pred HHHHhc
Confidence 555543
No 98
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.98 E-value=2.3e-08 Score=93.89 Aligned_cols=137 Identities=9% Similarity=0.002 Sum_probs=88.7
Q ss_pred hhhhhhHHhhHHHH-HHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHH-HHHHHHHHHHhCCC
Q 021692 29 AGIGYLFGSISPVI-KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNF-IGYGWVWLIVTGRA 105 (309)
Q Consensus 29 ~g~~Y~fsvys~~l-~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~-~gy~l~~l~~~~~i 105 (309)
....+.+..|.|.+ ++++|.+..+.+.+.....++..+ .++.|++.||+|+|+++.++..+.. .++..... ....
T Consensus 232 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-~~~~- 309 (394)
T TIGR00883 232 TTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMA-LLDS- 309 (394)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH-HhcC-
Confidence 34455666666655 678899998888776666666655 5589999999999998776555444 33333222 2221
Q ss_pred CChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhh-hhhhhhHHHHHHHHHHHc
Q 021692 106 PVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILK-GFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 106 ~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~-~~~GLg~ai~~~i~~~~~ 169 (309)
.+.+.+.....+.+.+.+..++.......+.+| ++||++.|+.. ....+|+.+.+.+...+.
T Consensus 310 --~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~ 373 (394)
T TIGR00883 310 --GSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALV 373 (394)
T ss_pred --CchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHH
Confidence 245555555556666666777777888889999 56999999843 333355555555544443
No 99
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.96 E-value=5.4e-08 Score=93.25 Aligned_cols=132 Identities=12% Similarity=0.037 Sum_probs=98.0
Q ss_pred hHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHH
Q 021692 38 ISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCIL 116 (309)
Q Consensus 38 ys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~ 116 (309)
|.+.+-+++|++..+.+.+.....++..+ ..+.|++.||+|+|+++.+|.+...+++.++.. . ++.|.+...
T Consensus 227 ~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~--~-----~~~~~~~~~ 299 (382)
T TIGR00902 227 FSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGA--I-----EAFPLIFLL 299 (382)
T ss_pred HHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHh--H-----hhHHHHHHH
Confidence 44444456999999999887766666665 558999999999999999999999988876643 2 257777777
Q ss_pred HHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhh-hhhhhhHHHHHHHHHHHccC-ChHHHH
Q 021692 117 IFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILK-GFAGLGGAILTQVYTMIHAP-DHANLI 177 (309)
Q Consensus 117 ~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~-~~~GLg~ai~~~i~~~~~~~-~~~~~~ 177 (309)
..+-|...+....+.+..+.+. | ++|+.+.|+.. ...|+|.++.+.+...+.+. +...|+
T Consensus 300 q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~~~~~ 362 (382)
T TIGR00902 300 QILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGAGTFV 362 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 7777777788887877777777 7 67999999864 46678888777666555543 344343
No 100
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.96 E-value=6.9e-09 Score=106.70 Aligned_cols=131 Identities=15% Similarity=0.056 Sum_probs=104.6
Q ss_pred HHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHH--hCCC------
Q 021692 35 FGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIV--TGRA------ 105 (309)
Q Consensus 35 fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~--~~~i------ 105 (309)
++.-.+.++++++++.++.+.+.+..+++..+ .++.|++.||+|+|+.+.+|.++.++|.+++.+.. .+.-
T Consensus 52 ~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~ 131 (633)
T TIGR00805 52 VNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTV 131 (633)
T ss_pred HHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccc
Confidence 34455888999999999999999889998877 66999999999999999999999999988886642 0000
Q ss_pred ----------------------------------C--ChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchh
Q 021692 106 ----------------------------------P--VLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVG 148 (309)
Q Consensus 106 ----------------------------------~--~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avG 148 (309)
. ...++.+.+..++.|+|.+..++.....+.+|+| ++|+...|
T Consensus 132 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~ 211 (633)
T TIGR00805 132 SSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIG 211 (633)
T ss_pred cccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHH
Confidence 0 0124455567888999999998888899999999 67999999
Q ss_pred hhhhhhhhhHHHHHHHH
Q 021692 149 ILKGFAGLGGAILTQVY 165 (309)
Q Consensus 149 i~~~~~GLg~ai~~~i~ 165 (309)
+..+...+|.++...+.
T Consensus 212 i~~~~~~iG~~lG~llg 228 (633)
T TIGR00805 212 ILESIAVFGPAFGYLLG 228 (633)
T ss_pred HHHHHHHhhhHHHHHHH
Confidence 99888888877765543
No 101
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.96 E-value=2.4e-09 Score=102.67 Aligned_cols=145 Identities=20% Similarity=0.260 Sum_probs=114.0
Q ss_pred hhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhc
Q 021692 45 SLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNG 123 (309)
Q Consensus 45 ~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g 123 (309)
..+-++++++++...+.+...+ .++.|.+.||+|.|..+++|...++....+|.+ .+ +++.+.+...+-|.|
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFaf--g~-----sy~~l~vAR~LQgvg 172 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAF--GN-----SYPMLFVARSLQGVG 172 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHH--cc-----hhHHHHHHHHHhhhh
Confidence 4566778888887777776655 889999999999999999999999998888864 22 688888889999999
Q ss_pred hhhhhhhHHHHHhhhcCC-C-CCcchhhhhhhhhhhHHHHHHHHHHHcc--CChHHHHHHHHHHHHHHHHHHHhhccc
Q 021692 124 ETYFNTAALVSCVQNFPK-S-RGPVVGILKGFAGLGGAILTQVYTMIHA--PDHANLIFMVAVGPAMVVIALMFIIRP 197 (309)
Q Consensus 124 ~~~~~~~~~~~~~~~FP~-~-RG~avGi~~~~~GLg~ai~~~i~~~~~~--~~~~~~~l~la~~~~~v~l~~~~~ir~ 197 (309)
+++.+++.+..+++-||+ + ||.++|+..++.++|-.+.+|+-.-+++ +....|+ .++++.++-+.+..+.+++
T Consensus 173 sA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFl-VL~~v~Lld~~L~l~vi~p 249 (464)
T KOG3764|consen 173 SAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFL-VLAIVLLLDGALQLLVIEP 249 (464)
T ss_pred HHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHH-HHHHHHHHHHHHHHheeCc
Confidence 999999999999999994 3 8999999999999999888776554443 2344454 5566555444444455544
No 102
>PRK15075 citrate-proton symporter; Provisional
Probab=98.94 E-value=7.4e-08 Score=93.95 Aligned_cols=134 Identities=13% Similarity=0.128 Sum_probs=79.8
Q ss_pred hhhhHHhhHHHH-HHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHH-HHHHHHHHHHhCCCCC
Q 021692 31 IGYLFGSISPVI-KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNF-IGYGWVWLIVTGRAPV 107 (309)
Q Consensus 31 ~~Y~fsvys~~l-~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~-~gy~l~~l~~~~~i~~ 107 (309)
..+....|.|.+ ++.+|++..+.........++..+ .++.|++.||+|+|++..++..+.. .+++.+......
T Consensus 253 ~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~---- 328 (434)
T PRK15075 253 SFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAA---- 328 (434)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcC----
Confidence 345556667665 666899998887776666565555 5589999999999999887765543 333222221121
Q ss_pred hhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhh-hhhhhHHHHHHHHHHH
Q 021692 108 LPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKG-FAGLGGAILTQVYTMI 168 (309)
Q Consensus 108 ~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~-~~GLg~ai~~~i~~~~ 168 (309)
++++.+.....+.+.+.+..+........+.+| +.||.+.|+..+ +..+++.+.+.+....
T Consensus 329 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i 391 (434)
T PRK15075 329 PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWL 391 (434)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHH
Confidence 123333222222333444444445566779999 569999998533 3333455555554433
No 103
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.94 E-value=1.8e-08 Score=96.93 Aligned_cols=137 Identities=15% Similarity=0.076 Sum_probs=87.7
Q ss_pred hhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCC----
Q 021692 33 YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPV---- 107 (309)
Q Consensus 33 Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~---- 107 (309)
+....|.+.+.+++|++..+.+.......++..+ .++.|++.||+|+|+.+.++.++..++..++..........
T Consensus 301 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (481)
T TIGR00879 301 NAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKS 380 (481)
T ss_pred eehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccc
Confidence 3445566778788999987776666655555555 55899999999999999998887777766654321111110
Q ss_pred hhHHHHHHHH-HHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 108 LPLWAMCILI-FVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 108 ~s~~~l~~~~-~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
.+...+.... ...+.+.+. .......+.+.+| ++||++.|+......+|+++.+.+...+.+
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~ 444 (481)
T TIGR00879 381 SGNVAIVFILLFIAFFAMGW-GPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLE 444 (481)
T ss_pred hhHHHHHHHHHHHHHHHccc-cCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0122222111 112222222 1223344579999 569999999988888999988887776654
No 104
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.94 E-value=1.3e-07 Score=96.15 Aligned_cols=191 Identities=13% Similarity=0.093 Sum_probs=111.5
Q ss_pred HHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHH
Q 021692 40 PVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIF 118 (309)
Q Consensus 40 ~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~ 118 (309)
+.+-+++|-+ .+..++++...++... .++.|.++|.+|||.++++|.++..+|...-+- +.+.-.++....
T Consensus 68 ~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~at-------A~~~~~~iag~~ 139 (599)
T PF06609_consen 68 PYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCAT-------AQNMNTFIAGMV 139 (599)
T ss_pred HHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhc-------CCcHHHHHHHHH
Confidence 5566777765 4445666777777766 568999999999999999999999999876432 235667777777
Q ss_pred HHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHH-HHcc--CChHHHHHHHHHHHHHHHHHHHhh
Q 021692 119 VGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYT-MIHA--PDHANLIFMVAVGPAMVVIALMFI 194 (309)
Q Consensus 119 l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~-~~~~--~~~~~~~l~la~~~~~v~l~~~~~ 194 (309)
+.|.|.+..... .....+..| |+|+.+.++..... +-....++... .+.. +|++.|. +.++...+..+...++
T Consensus 140 l~GvgaG~~~~~-~~~isEl~p~k~R~~~~~~~~~~~-i~~~~~~~~ia~~~~~~~~WRw~~~-~~~i~~~i~~vl~~~f 216 (599)
T PF06609_consen 140 LYGVGAGVQELA-ALAISELVPNKWRGLGLAIASIPF-IITTWISPLIAQLFAAHSGWRWIFY-IFIIWSGIALVLIFFF 216 (599)
T ss_pred HHHHhhHHHHHH-HHHHHHhcccchhhhHhHHHHHHH-HhhhcccHHHHHHhccCCCcchHHH-HHHHHHHHHHHHHHHH
Confidence 777776665433 334679999 66987776644333 21121223333 3332 2444444 3344333334444666
Q ss_pred cccCCCCCCCCCCC-----CcchhH-H-HHHHHHHHHHHHHHHhhhhh-ccCchh
Q 021692 195 IRPVGGHRQVRPSD-----SSSFTF-I-YSVCLLLAAYLMGVMLVEDL-VDLNHT 241 (309)
Q Consensus 195 ir~~p~~~~~~~~~-----~~~f~~-~-~~~~~~l~~yl~~~~~~~~~-~~~~~~ 241 (309)
.++|++.+.++++. -+++=+ + +-....++.||+-.+.-... .+.+++
T Consensus 217 Y~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa 271 (599)
T PF06609_consen 217 YFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSA 271 (599)
T ss_pred hCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCc
Confidence 77666443222111 122222 1 22234567777777666553 455544
No 105
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.93 E-value=3.3e-08 Score=92.26 Aligned_cols=128 Identities=9% Similarity=-0.077 Sum_probs=88.1
Q ss_pred hHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHH
Q 021692 38 ISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCIL 116 (309)
Q Consensus 38 ys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~ 116 (309)
+.+++.+++|++..+.+.+.+...++..+ .++.|++.||+|+|+.+.++.+...+++.++... .. .+.+.+...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~ 301 (377)
T TIGR00890 227 LYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFI--PM---LNDVLFLAT 301 (377)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHc--cc---chhHHHHHH
Confidence 33445567899988888777666666666 5689999999999999999888888777655432 21 122222222
Q ss_pred HHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 117 IFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 117 ~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
..+.+.+.+...+.......+.+| ++||++.|+......+|+++.+.+.....+
T Consensus 302 ~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 356 (377)
T TIGR00890 302 VALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALT 356 (377)
T ss_pred HHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333344444444444556779999 679999999988888998888877665554
No 106
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.91 E-value=5.7e-08 Score=93.01 Aligned_cols=154 Identities=18% Similarity=0.213 Sum_probs=95.7
Q ss_pred hHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHH
Q 021692 38 ISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCIL 116 (309)
Q Consensus 38 ys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~ 116 (309)
|.+.+-++.|+++. +.......++... .++.|++.||+|+|+.+.++..+..+++.++.. .. +.+.+.+.
T Consensus 238 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~ 308 (399)
T PRK05122 238 FITLYYAARGWDGA--ALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWL--AP-----SPWMALIG 308 (399)
T ss_pred HHHHHHHHcccccc--hHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH--hc-----cHHHHHHH
Confidence 33333334566433 2333333344444 458999999999999998888877777766543 11 34555555
Q ss_pred HHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHHHHHHHHHhh
Q 021692 117 IFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAMVVIALMFI 194 (309)
Q Consensus 117 ~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~~v~l~~~~~ 194 (309)
..+.|.+.+..+........+.+| ++||++.|+......+|.++.+++...+.+. +....+...++ ..+++++...+
T Consensus 309 ~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~-~~~~~~~~~~~ 387 (399)
T PRK05122 309 AALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAAL-AALLGLALTWL 387 (399)
T ss_pred HHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH-HHHHHHHHHHH
Confidence 566777777666565566778898 6799999998888888888887776655432 33333333333 33344555455
Q ss_pred cccCCCC
Q 021692 195 IRPVGGH 201 (309)
Q Consensus 195 ir~~p~~ 201 (309)
+++++++
T Consensus 388 ~~~~~~~ 394 (399)
T PRK05122 388 LYRRAPR 394 (399)
T ss_pred hcccccc
Confidence 5544443
No 107
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.90 E-value=5.8e-08 Score=89.43 Aligned_cols=133 Identities=22% Similarity=0.277 Sum_probs=104.8
Q ss_pred hhhHHhhHHHH-HHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHH-HHHHHHHHHHHHHHHHHHHHhCCCCCh
Q 021692 32 GYLFGSISPVI-KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWG-ALLVGALQNFIGYGWVWLIVTGRAPVL 108 (309)
Q Consensus 32 ~Y~fsvys~~l-~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~-vllig~~l~~~gy~l~~l~~~~~i~~~ 108 (309)
...+..+.+.+ ++.+|++..+.+.......++..+ .++.|++.||+|+|+ ++.++..+..+++..+.. .+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~----- 263 (352)
T cd06174 191 YYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLAL--AP----- 263 (352)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH--hc-----
Confidence 34445556555 445599999999888877777776 558999999999999 999999888888766543 22
Q ss_pred hHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC
Q 021692 109 PLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP 171 (309)
Q Consensus 109 s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~ 171 (309)
+.+.+.....+.+.+.+..++.......+.+| ++||.+.|+......+|+.+.+.+...+.+.
T Consensus 264 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~ 327 (352)
T cd06174 264 SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDT 327 (352)
T ss_pred cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 35666666777777888888888888999999 7799999999999999999888887776643
No 108
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.90 E-value=8.8e-08 Score=92.42 Aligned_cols=136 Identities=14% Similarity=0.154 Sum_probs=82.4
Q ss_pred hhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCCh
Q 021692 30 GIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVL 108 (309)
Q Consensus 30 g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~ 108 (309)
+..+....+.|.+.++.|++..+.+.+.+...++..+ .++.|++.||+|+|++...+.++..++....... .. .
T Consensus 245 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~-~~----~ 319 (426)
T PRK12307 245 GANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRI-PQ----D 319 (426)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH-cc----c
Confidence 3444444555666556799988888776666566655 5589999999999999988887766554433221 11 1
Q ss_pred hHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 109 PLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 109 s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
+.+.+.......+.+...........+.+.|| ++||++.|+..+...+|+.+.+.+...+.+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~ 382 (426)
T PRK12307 320 NYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGI 382 (426)
T ss_pred cHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHH
Confidence 22222211111111111112223345679999 569999999888887887766665544433
No 109
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.89 E-value=9.6e-08 Score=94.08 Aligned_cols=130 Identities=20% Similarity=0.270 Sum_probs=84.9
Q ss_pred HhhHHHH-HHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHH
Q 021692 36 GSISPVI-KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAM 113 (309)
Q Consensus 36 svys~~l-~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l 113 (309)
..+.|.+ ++++|++..+.+.+.+...++..+ .++.|++.||+|+|+++.++.++..++..+... .. ..+.+.+
T Consensus 295 ~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~ 369 (496)
T PRK03893 295 QALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFA--IG---GANVWVL 369 (496)
T ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhh--cc---ccHHHHH
Confidence 3445554 578999999999888777777766 558999999999999988887665555433322 11 1234433
Q ss_pred HHHHHH-HHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC
Q 021692 114 CILIFV-GNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP 171 (309)
Q Consensus 114 ~~~~~l-~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~ 171 (309)
.....+ ...+.+ ..........+.+| ++||++.|+..+...+|+.+.+.+...+.+.
T Consensus 370 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~ 428 (496)
T PRK03893 370 GLLLFFQQMLGQG-ISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQR 428 (496)
T ss_pred HHHHHHHHHHhcc-cchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhcc
Confidence 332222 122222 22334456678999 6799999998888888888776665544443
No 110
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.89 E-value=6.8e-08 Score=100.85 Aligned_cols=114 Identities=14% Similarity=0.091 Sum_probs=76.5
Q ss_pred HHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC
Q 021692 62 LGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP 140 (309)
Q Consensus 62 vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP 140 (309)
++..+ .+++|++.||+|||++++++.++.+++.+++++. . +.+.+.+..++.+...+.........+.++||
T Consensus 606 l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~--~-----s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~P 678 (742)
T TIGR01299 606 LAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFG--N-----SESAMIALLCLFGGLSIAAWNALDVLTVELYP 678 (742)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH--c-----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44444 4589999999999999999988888776665432 1 22333333334444444445566677889999
Q ss_pred -CCCCcchhhhhhhhhhhHHHHHHHHHHHccCChHHHHHHHHH
Q 021692 141 -KSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAV 182 (309)
Q Consensus 141 -~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~~~~~~~l~la~ 182 (309)
+.||++.|+..+...+|+++.+.+...+........+++.++
T Consensus 679 t~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~ 721 (742)
T TIGR01299 679 SDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASA 721 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 669999999999998999988877665544333333333343
No 111
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.88 E-value=5.3e-08 Score=77.75 Aligned_cols=102 Identities=20% Similarity=0.260 Sum_probs=79.2
Q ss_pred HHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC
Q 021692 62 LGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP 140 (309)
Q Consensus 62 vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP 140 (309)
++..+ +++.|++.||+|+|+++..+.....++...... . .+.+.+.+...+.|.+.+..++.......+.+|
T Consensus 9 ~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 9 LGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFAL--S-----SNITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred hHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHH--h-----ccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 33434 668999999999999999998888777665543 1 256777767777777777777777778889999
Q ss_pred -CCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 141 -KSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 141 -~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
++|+.+.|+......+|..+.+.+.....+
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 112 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQ 112 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhc
Confidence 669999999999888998888777665554
No 112
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.88 E-value=5.5e-08 Score=95.43 Aligned_cols=163 Identities=13% Similarity=0.077 Sum_probs=84.8
Q ss_pred hhhhHHhhHHH-HHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhcccc--chHHHH-HHHHHHHHHHHHHHHHHHhCCC
Q 021692 31 IGYLFGSISPV-IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVL--PIWGAL-LVGALQNFIGYGWVWLIVTGRA 105 (309)
Q Consensus 31 ~~Y~fsvys~~-l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~--Gpr~vl-lig~~l~~~gy~l~~l~~~~~i 105 (309)
..|.+..|.|. ++++.|++..+.+.......++..+ .+++|++.||+ |+|... .....+..++..++++...+
T Consensus 268 ~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~-- 345 (452)
T PRK11273 268 LRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAG-- 345 (452)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhccc--
Confidence 34555556655 4677899998888776665566655 55899999999 555432 22223333444444332111
Q ss_pred CChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHH-HHccC--ChHHHHHHHH
Q 021692 106 PVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYT-MIHAP--DHANLIFMVA 181 (309)
Q Consensus 106 ~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~-~~~~~--~~~~~~l~la 181 (309)
+.+.........|.+.............+.+| ++||++.|+......+|+++.++... ...+. ....|. ..+
T Consensus 346 ---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~-~~~ 421 (452)
T PRK11273 346 ---NPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFM-VMI 421 (452)
T ss_pred ---ChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHH-HHH
Confidence 22222222222222111111112233568999 66999999987766677776544433 33322 233333 233
Q ss_pred HHHHHHHHHHHhhcccCCC
Q 021692 182 VGPAMVVIALMFIIRPVGG 200 (309)
Q Consensus 182 ~~~~~v~l~~~~~ir~~p~ 200 (309)
+ ..+++++....++.++.
T Consensus 422 ~-~~~~~~~~~~~~~~~~~ 439 (452)
T PRK11273 422 G-GSILAVILLIVVMIGEK 439 (452)
T ss_pred H-HHHHHHHHHHHHhcccc
Confidence 2 23445555444444433
No 113
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.87 E-value=5.3e-07 Score=86.29 Aligned_cols=122 Identities=12% Similarity=0.032 Sum_probs=82.6
Q ss_pred HHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchH----HHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHH
Q 021692 40 PVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIW----GALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMC 114 (309)
Q Consensus 40 ~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr----~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~ 114 (309)
|.+.+++|+|..+++.+.+...++..+ +++.|.+.||+|+| +.+.++.......+ .... +++|.+.
T Consensus 28 ~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~-----~~~~----~~~~~l~ 98 (382)
T PRK11128 28 SVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAVAF-----WFGA----HSFWLLF 98 (382)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHH-----HHhc----ccHHHHH
Confidence 455677899999999998877777666 77899999999983 33333332222211 1111 2688887
Q ss_pred HHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHccC
Q 021692 115 ILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAP 171 (309)
Q Consensus 115 ~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~ 171 (309)
+...+.+.+.+........ ...+++++|+.+.|.......+|.++.+++...+.+.
T Consensus 99 i~~~l~g~~~~~~~~~~~a-~~~~~~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~ 154 (382)
T PRK11128 99 VAIGLFNLFFSPLVPLTDA-LANTWQKQIGLDYGKVRLWGSIAFVIGSALTGKLVSW 154 (382)
T ss_pred HHHHHHHHHHcccccHHHH-HHHHHHhhccCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766666665555444333 4445577899999998888889888888877665543
No 114
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.87 E-value=4.2e-07 Score=86.03 Aligned_cols=150 Identities=12% Similarity=0.143 Sum_probs=87.4
Q ss_pred HHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHH-HHHHHHHHHHhCCCCChhHHHHHHHHH
Q 021692 41 VIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNF-IGYGWVWLIVTGRAPVLPLWAMCILIF 118 (309)
Q Consensus 41 ~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~-~gy~l~~l~~~~~i~~~s~~~l~~~~~ 118 (309)
.+++.+|+++.+.+.+.....++..+ .++.|++.||+|+|+++.++..+.. .+..+......+ .+.|...+...
T Consensus 220 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 295 (377)
T PRK11102 220 VYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLD----LGFWALVVGVA 295 (377)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHh----hhHHHHHHHHH
Confidence 35677899999998877766666655 5689999999999999998887654 333332221111 13454443333
Q ss_pred HHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhh-hhhhHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHhhcc
Q 021692 119 VGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGF-AGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMVVIALMFIIR 196 (309)
Q Consensus 119 l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~-~GLg~ai~~~i~~~~~~~~~~~~~l~la~~~~~v~l~~~~~ir 196 (309)
+.+.+.+...........+..|++||.+.++.... +++|+.+.+.+ ......+...++...+ ...+.+++..++.+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~g~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 372 (377)
T PRK11102 296 AFVGCVSMISSNAMAVILDEFPHMAGTASSLAGTLRFGIGAIVGALL-SLAPFTSAWPMVWSMA-FCSILSILFYLYAS 372 (377)
T ss_pred HHHHHHHHhhHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHH-HhccCCChHHHHHHHH-HHHHHHHHHHHHhc
Confidence 33333444444445556677899999999986443 45655544433 3322333433433333 33334444444443
No 115
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.85 E-value=7.6e-08 Score=95.74 Aligned_cols=125 Identities=10% Similarity=0.043 Sum_probs=98.8
Q ss_pred HHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHH
Q 021692 41 VIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFV 119 (309)
Q Consensus 41 ~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l 119 (309)
.+++.+|+|..+.+.......++..+ +++.|++.||+|+|+++..|.++..+++.++... ... ++.|.......+
T Consensus 285 ~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~-~~~---~~~~~~~~~~~l 360 (495)
T PRK14995 285 ELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMT-DFS---TQQWQAWGLMAL 360 (495)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHh-cCC---CchHHHHHHHHH
Confidence 46888999999999887776676666 6699999999999999999988888887665542 211 245666666777
Q ss_pred HHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 120 GNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 120 ~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
.|.|.+....+......+..| ++||.+.|+......+|+++...+...++
T Consensus 361 ~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~ 411 (495)
T PRK14995 361 LGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLL 411 (495)
T ss_pred HHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888888889999 67999999988888888888877766654
No 116
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.84 E-value=1.4e-06 Score=83.52 Aligned_cols=122 Identities=11% Similarity=-0.044 Sum_probs=81.0
Q ss_pred HHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHH----HHHHHHHHHHHHHHHHHHHhCCCCChhHHHH
Q 021692 39 SPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGA----LLVGALQNFIGYGWVWLIVTGRAPVLPLWAM 113 (309)
Q Consensus 39 s~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~v----llig~~l~~~gy~l~~l~~~~~i~~~s~~~l 113 (309)
.|.+.+++|+|..|++.+.+...+...+ +++.|.+.||+|+|.. +.++..+..+. +. ... +++|.+
T Consensus 27 l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~---~~-~~~-----~~~~~l 97 (382)
T TIGR00902 27 FPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAA---FS-AGA-----HNAWLL 97 (382)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH---HH-Hhh-----hhHHHH
Confidence 4466678999999999987777666655 6789999999997443 33333222221 11 111 257877
Q ss_pred HHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 114 CILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 114 ~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
.+...+.+.+.+...+. ......+++++||.+.|......++|.++.+++...+.+
T Consensus 98 ~~~~~l~~~~~~~~~p~-~~al~~~~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~ 153 (382)
T TIGR00902 98 FIAIGLFALFFSAGMPI-GDALANTWQKQFGLDYGKVRLIGSAAFIIGSALFGGLIG 153 (382)
T ss_pred HHHHHHHHHHHccchhH-HHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 76665555444443333 333445668889999999988888999988887666654
No 117
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.84 E-value=5.8e-08 Score=95.02 Aligned_cols=127 Identities=18% Similarity=0.232 Sum_probs=98.6
Q ss_pred HHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHH
Q 021692 42 IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVG 120 (309)
Q Consensus 42 l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~ 120 (309)
+++.+|++..+.+.......++..+ .++.|++.||+|+|+++.+|..+..++..++...... ..+.+.+.....+.
T Consensus 282 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~ 358 (485)
T TIGR00711 282 LQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTP---DTPFLAIALPQFIR 358 (485)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCC---CCCHHHHHHHHHHH
Confidence 5777999999998887776676666 5689999999999999999998888887665422222 12456655556677
Q ss_pred HhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC
Q 021692 121 NNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP 171 (309)
Q Consensus 121 g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~ 171 (309)
|.|.+..+.+......+.+| ++||.+.|+......+|+++.+.+...++++
T Consensus 359 g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 359 GFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888777777777778899 7799999999888889999988887776643
No 118
>PRK11043 putative transporter; Provisional
Probab=98.84 E-value=4.5e-07 Score=87.00 Aligned_cols=139 Identities=12% Similarity=0.061 Sum_probs=90.7
Q ss_pred hhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCCh
Q 021692 30 GIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVL 108 (309)
Q Consensus 30 g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~ 108 (309)
+..+.+..+.|.+.+++|++..+.+.......++..+ +...+++.||+|+|+....+.+...++...++...... .+
T Consensus 217 ~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 294 (401)
T PRK11043 217 AAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLS--HP 294 (401)
T ss_pred HHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhc--cC
Confidence 3345555566777677899999888765555555555 45789999999999977666655554444333321111 12
Q ss_pred hHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 109 PLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 109 s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
+.+.+.+...+.+.+.+..+........+.+|++||.+.|+..+....++.+.+++...+.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 295 SLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 34444444445555666666666666678889999999999888765666666666665544
No 119
>PRK10504 putative transporter; Provisional
Probab=98.83 E-value=2.8e-07 Score=90.35 Aligned_cols=122 Identities=9% Similarity=0.032 Sum_probs=85.1
Q ss_pred HHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHH
Q 021692 42 IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVG 120 (309)
Q Consensus 42 l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~ 120 (309)
++..+|.+..+.+.+.....++... .++.|++.||+|+|+++.++.++..++..++...... .+.+.+.+...+.
T Consensus 288 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 363 (471)
T PRK10504 288 LQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALL----GWYYLLPFVLFLQ 363 (471)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhcccc----ccHHHHHHHHHHH
Confidence 4557899998888776666666555 4689999999999999999988777666555432111 1334333344445
Q ss_pred HhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHH
Q 021692 121 NNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTM 167 (309)
Q Consensus 121 g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~ 167 (309)
|.+.+..+........+.+| +.||.+.|+......+|+++.+.+...
T Consensus 364 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ 411 (471)
T PRK10504 364 GMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGL 411 (471)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 56666666677777778999 669999999777766666666555443
No 120
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.82 E-value=1.5e-07 Score=93.32 Aligned_cols=133 Identities=13% Similarity=0.128 Sum_probs=83.9
Q ss_pred hHHhhHHHH-HHhhCCCHHHHHHHHHHHHHHh-hhhhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHH
Q 021692 34 LFGSISPVI-KSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLW 111 (309)
Q Consensus 34 ~fsvys~~l-~~~lg~s~~~~~~i~~~~~vg~-~~~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~ 111 (309)
.++.+.|.+ ++.+ ++.+.........+.. ...+++|+++||+|+|+++.++.+...+......+...... +.+++
T Consensus 270 g~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~-~~~~~ 346 (462)
T PRK15034 270 GFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTG-SGNFI 346 (462)
T ss_pred HHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcccc-ccHHH
Confidence 344444444 4444 3333322223333333 34669999999999999999999877755433333332211 12455
Q ss_pred HHHHHHHHHHhchhhhhhhHHHHHhhhcCC----------------------CCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 112 AMCILIFVGNNGETYFNTAALVSCVQNFPK----------------------SRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 112 ~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~----------------------~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
...........+.|..|.+....+.+.||+ +-|.++|+..+.-++|+.+.+.++....
T Consensus 347 ~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~ 426 (462)
T PRK15034 347 AFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSL 426 (462)
T ss_pred HHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHH
Confidence 544433334456777888888889999995 4567888888888888888887776655
No 121
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.82 E-value=1.5e-07 Score=92.20 Aligned_cols=128 Identities=14% Similarity=0.038 Sum_probs=83.2
Q ss_pred HhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHH
Q 021692 36 GSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMC 114 (309)
Q Consensus 36 svys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~ 114 (309)
..|.|.+.++.|++..+.........+...+ .++.|++.||+|+|+++.++.++..+++.+++....... .+.+...
T Consensus 291 ~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~--~~~~~~~ 368 (479)
T PRK10077 291 LYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQA--PGIVALL 368 (479)
T ss_pred HHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCc--ccHHHHH
Confidence 4466788788898876555544444444444 568999999999999999999998888877765433221 1222221
Q ss_pred HHHHHHHhchhhh-hhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHH
Q 021692 115 ILIFVGNNGETYF-NTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYT 166 (309)
Q Consensus 115 ~~~~l~g~g~~~~-~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~ 166 (309)
..++.+.+.+.. .+.....+.+.|| ++||.+.|+..+...+++.+.+.++.
T Consensus 369 -~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p 421 (479)
T PRK10077 369 -SMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFP 421 (479)
T ss_pred -HHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 112222222222 2334566779999 67999999988887788877765543
No 122
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.82 E-value=2.3e-07 Score=86.60 Aligned_cols=134 Identities=19% Similarity=0.201 Sum_probs=82.5
Q ss_pred hHHhhHH-HHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHH-HHHHHHHH---HHHHHHHHhCCCCC
Q 021692 34 LFGSISP-VIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLV-GALQNFIG---YGWVWLIVTGRAPV 107 (309)
Q Consensus 34 ~fsvys~-~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vlli-g~~l~~~g---y~l~~l~~~~~i~~ 107 (309)
.+..+.+ .+++.+|+|..+.+.+.....++..+ .++.|++.||+|+|+.... .......+ ....... .+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 309 (399)
T TIGR00893 233 FFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFA-TNYV-- 309 (399)
T ss_pred HHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHH-hccc--
Confidence 3444444 45778999999988877766666666 5689999999999961111 11111111 1111111 1111
Q ss_pred hhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC
Q 021692 108 LPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP 171 (309)
Q Consensus 108 ~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~ 171 (309)
++.+.......+.+.+.+ .++.......+.+| ++||.+.|+......+|+++.+.+...+.+.
T Consensus 310 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~ 373 (399)
T TIGR00893 310 NIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAAT 373 (399)
T ss_pred hhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccC
Confidence 133333333334443444 55666777889999 5699999999998889999888887766543
No 123
>PRK03699 putative transporter; Provisional
Probab=98.81 E-value=1.3e-07 Score=90.86 Aligned_cols=132 Identities=13% Similarity=-0.021 Sum_probs=88.1
Q ss_pred hhhHHhhHHHH-HHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChh
Q 021692 32 GYLFGSISPVI-KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (309)
Q Consensus 32 ~Y~fsvys~~l-~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s 109 (309)
.|.+..|.|.+ ++++|+|..+.+.+.....++..+ .++.|++.||+|+|+++..+..+..+++.++. ..+ +
T Consensus 221 ~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~~~-----~ 293 (394)
T PRK03699 221 QLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFV--NTD-----D 293 (394)
T ss_pred HHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH--HcC-----C
Confidence 45555666655 678999999988876665566666 45899999999999998887776666554432 222 2
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 110 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
.+.+.....+.|.+.+..++.......+..|++++...|.......+|+.+.+.+...+.+
T Consensus 294 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~ 354 (394)
T PRK03699 294 PSHLLYAILGLGFFSSAIYTTIITLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVA 354 (394)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 2333333344454445455555555556678788888888877777888887777665554
No 124
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.78 E-value=3.1e-07 Score=91.06 Aligned_cols=160 Identities=11% Similarity=0.029 Sum_probs=87.0
Q ss_pred hHHhhHH-HHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchH-----HHHHHHHHHHHHHHHHHHHHHhCCCC
Q 021692 34 LFGSISP-VIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIW-----GALLVGALQNFIGYGWVWLIVTGRAP 106 (309)
Q Consensus 34 ~fsvys~-~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr-----~vllig~~l~~~gy~l~~l~~~~~i~ 106 (309)
.+..+.| .+++++|++..+.+.+.+...++..+ .+++|+++||+|+| +.......+...+..+..+...+
T Consensus 270 ~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~--- 346 (476)
T PLN00028 270 TMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRAN--- 346 (476)
T ss_pred HHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccc---
Confidence 3333444 35777899999988877766666666 55899999999876 22121111111222222111111
Q ss_pred ChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHccCCh-HHHHHHHHHHHH
Q 021692 107 VLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAPDH-ANLIFMVAVGPA 185 (309)
Q Consensus 107 ~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~~~-~~~~l~la~~~~ 185 (309)
+.+.......+.+.+.+..+........+..|++||.+.|+......+|+.+.+.++..--..+. ..|+ +.+ ...
T Consensus 347 --~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~~~~~~~y~~~f~-~~~-~~~ 422 (476)
T PLN00028 347 --SLGAAIVVMILFSIFVQAACGATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFFTGSSYSTETGIS-LMG-VMI 422 (476)
T ss_pred --hHHHHHHHHHHHHHHHHHhhhhhcccCcccChhhchhhhhhhhccccHHHHHHHHHHHhcCCccHhhHHH-HHH-HHH
Confidence 23333333333333333333333333445667899999999877766788877766541101122 3333 333 334
Q ss_pred HHHHHHHhhcccCCC
Q 021692 186 MVVIALMFIIRPVGG 200 (309)
Q Consensus 186 ~v~l~~~~~ir~~p~ 200 (309)
+++.+..+++|.|.+
T Consensus 423 ~i~~~~~~~~~~~~~ 437 (476)
T PLN00028 423 IACTLPVAFIHFPQW 437 (476)
T ss_pred HHHHHHHHheeccch
Confidence 556677777775543
No 125
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.76 E-value=1e-06 Score=85.14 Aligned_cols=161 Identities=12% Similarity=0.052 Sum_probs=97.8
Q ss_pred hHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccc----cchHH-HHHHHHHHHHHHHHHHHHHHhCCCCChhHH
Q 021692 38 ISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEV----LPIWG-ALLVGALQNFIGYGWVWLIVTGRAPVLPLW 111 (309)
Q Consensus 38 ys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr----~Gpr~-vllig~~l~~~gy~l~~l~~~~~i~~~s~~ 111 (309)
+.+.+.+++|+|..+++.+.+...+...+ .++.|.++|| +|+|+ .++++.....++..+++...... .....+
T Consensus 22 l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~-~~~~~~ 100 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFS-ATGKLV 100 (437)
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCC-cchHHH
Confidence 33567889999999999998888787777 7799999998 57644 67778777777766654321110 011233
Q ss_pred HHHHHHHHHHhchhhhhhhHHHHHhhhcC--CCCCcchhhhhhhhhhhHHHH----HHHHHHHcc-C---ChHHHHHHHH
Q 021692 112 AMCILIFVGNNGETYFNTAALVSCVQNFP--KSRGPVVGILKGFAGLGGAIL----TQVYTMIHA-P---DHANLIFMVA 181 (309)
Q Consensus 112 ~l~~~~~l~g~g~~~~~~~~~~~~~~~FP--~~RG~avGi~~~~~GLg~ai~----~~i~~~~~~-~---~~~~~~l~la 181 (309)
.+.+...+.+.+.+..+.+......+..+ ++|+...++...+..+|+.+. +++...+-+ + +++......+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~ 180 (437)
T TIGR00792 101 YAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLA 180 (437)
T ss_pred HHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHH
Confidence 44444445566666666666666666663 669999888766665665554 333332211 1 2333333444
Q ss_pred HHHHHHHHHHHhhcccCC
Q 021692 182 VGPAMVVIALMFIIRPVG 199 (309)
Q Consensus 182 ~~~~~v~l~~~~~ir~~p 199 (309)
++..+..++...++|+++
T Consensus 181 ~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 181 LIGVVSLIICFFGTKERY 198 (437)
T ss_pred HHHHHHHHHHHcCCEecC
Confidence 444444445556667654
No 126
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.76 E-value=2e-07 Score=86.69 Aligned_cols=126 Identities=15% Similarity=0.055 Sum_probs=92.7
Q ss_pred hhHHHH-HHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHH
Q 021692 37 SISPVI-KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMC 114 (309)
Q Consensus 37 vys~~l-~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~ 114 (309)
.+.|.+ ++.+|++..+.+.+.....++..+ .++.|++.||+|+|+++.++..+..++..+... .. . +.|.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~-~~~~~~ 305 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGL--TP---P-NFPLFL 305 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHh--hc---h-hHHHHH
Confidence 344555 445899999988877766676666 558899999999999998887666666554433 21 1 256666
Q ss_pred HHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHH
Q 021692 115 ILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMI 168 (309)
Q Consensus 115 ~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~ 168 (309)
+...+.|.+.+..+........+.+| ++||.+.|+......+++++.+.+...+
T Consensus 306 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l 360 (365)
T TIGR00900 306 VLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPL 360 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66667777777777777788889999 6699999999888888888776665443
No 127
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.76 E-value=8.8e-07 Score=84.60 Aligned_cols=102 Identities=14% Similarity=0.067 Sum_probs=71.2
Q ss_pred HHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC
Q 021692 62 LGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP 140 (309)
Q Consensus 62 vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP 140 (309)
++..+ .+..|++.||+|+|+++.++.....++...... .. +.|.+.+...+.|.+.+...+.......+..|
T Consensus 269 l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 341 (408)
T PRK09874 269 VAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSF--VQ-----TPLQLGILRFLLGAADGALLPAVQTLLVYNSS 341 (408)
T ss_pred HHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHH--hc-----cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCC
Confidence 44434 557899999999999999888776666544332 11 35555555556666776666666666667777
Q ss_pred -CCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 141 -KSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 141 -~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
++||.+.|+......+|.++.+.+...+.+
T Consensus 342 ~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~ 372 (408)
T PRK09874 342 NQIAGRIFSYNQSFRDIGNVTGPLMGAAISA 372 (408)
T ss_pred cccceeeehHHHHHHHHHHHhhHHHHHHHHh
Confidence 679999999888888888877666554444
No 128
>PRK12382 putative transporter; Provisional
Probab=98.75 E-value=2.5e-07 Score=88.52 Aligned_cols=140 Identities=16% Similarity=0.183 Sum_probs=91.7
Q ss_pred HhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHH
Q 021692 36 GSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMC 114 (309)
Q Consensus 36 svys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~ 114 (309)
..|.+.+-++.|+++... ......++..+ .++.|++.||+|+|+.+.++..+..+++.++.. .+ +.+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~ 306 (392)
T PRK12382 236 GTFVSLYFASKGWAMAGF--TLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWL--AP-----TAWVAL 306 (392)
T ss_pred HHHHHHHHHhcCCchhHH--HHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHH--cc-----cHHHHH
Confidence 344444434567765433 22333344444 468999999999999999998888888766543 22 345544
Q ss_pred HHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHH
Q 021692 115 ILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGP 184 (309)
Q Consensus 115 ~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~ 184 (309)
....+.|.+.+..+........+.+| ++||++.|+..+...+|+++.+.+...+.+. +++..+.+.++..
T Consensus 307 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~ 378 (392)
T PRK12382 307 AGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISA 378 (392)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHH
Confidence 55556666666666666666778888 7799999999888889988888777666543 3443444444433
No 129
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.73 E-value=1.1e-06 Score=84.22 Aligned_cols=127 Identities=14% Similarity=0.058 Sum_probs=87.6
Q ss_pred hHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHH
Q 021692 38 ISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCIL 116 (309)
Q Consensus 38 ys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~ 116 (309)
+.+.+-++.|++..+.+.+.....++... ..+.|++.||+|+|+++.++.+...+++.+... . ++.|.+.+.
T Consensus 227 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~--~-----~~~~~~~~~ 299 (382)
T PRK11128 227 FSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGS--T-----TALPWLIVI 299 (382)
T ss_pred HHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHh--h-----hhHHHHHHH
Confidence 33444456899999888877766665555 568999999999999999998888777765532 1 256666666
Q ss_pred HHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhh-hhhhhhHHHHHHHHHHHccC
Q 021692 117 IFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILK-GFAGLGGAILTQVYTMIHAP 171 (309)
Q Consensus 117 ~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~-~~~GLg~ai~~~i~~~~~~~ 171 (309)
..+.|.+.+..+......+.+.-|+++|.+.++.. ...++|.++.+.+...+.+.
T Consensus 300 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~ 355 (382)
T PRK11128 300 QILHCGTFTVCHLAAMRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQH 355 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66677777777767776666765677888888764 33445555555554444443
No 130
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.73 E-value=1.4e-06 Score=84.01 Aligned_cols=126 Identities=14% Similarity=0.302 Sum_probs=76.5
Q ss_pred HHHHHHhhCCCHHHHHHHHHH-HHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHH
Q 021692 39 SPVIKSSLNYNQKQIARLGVA-KDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCIL 116 (309)
Q Consensus 39 s~~l~~~lg~s~~~~~~i~~~-~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~ 116 (309)
.+.+.+++|++..+.+.+... ...+..+ ..+.|++.||+|+|+.+.++.++..+....++...... ++.|.+.+.
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~---~~~~~~~~~ 309 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTP---KHLWTMALA 309 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC---CcHHHHHHH
Confidence 345677899999999887543 3344455 56899999999999988877776655544333211111 134444433
Q ss_pred H----HHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 117 I----FVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 117 ~----~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
. +..+.+.+..++.....+.+.+|.+ ..++..+..++|..+.+++...+.+
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~G~l~~ 364 (402)
T PRK11902 310 IGIENLCGGMGTAAFVALLMALCNRSFSAT---QYALLSALASVGRVYVGPTSGYLVE 364 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCcHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 2345555566666777777888833 2344444556777766665444433
No 131
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.73 E-value=5.4e-06 Score=80.88 Aligned_cols=81 Identities=7% Similarity=0.072 Sum_probs=56.6
Q ss_pred HHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccch-HHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHH
Q 021692 35 FGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPI-WGALLVGALQNFIGYGWVWLIVTGRAPVLPLWA 112 (309)
Q Consensus 35 fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gp-r~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~ 112 (309)
++...+.+++++|+|..|.+.+.....++..+ .++.|.+.||+|+ |+++.++.+...++..+..+ .. +++.
T Consensus 22 ~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~--~~-----~~~~ 94 (418)
T TIGR00889 22 LVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQ--VT-----TPAG 94 (418)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH--hc-----CHHH
Confidence 34555667888999999999998888787766 6699999999965 77888777766655544332 22 3555
Q ss_pred HHHHHHHHHh
Q 021692 113 MCILIFVGNN 122 (309)
Q Consensus 113 l~~~~~l~g~ 122 (309)
+.....+.+.
T Consensus 95 ~~~~~~l~~~ 104 (418)
T TIGR00889 95 MFPVLLANSL 104 (418)
T ss_pred HHHHHHHHHH
Confidence 5544444443
No 132
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.72 E-value=8.3e-08 Score=95.79 Aligned_cols=148 Identities=20% Similarity=0.151 Sum_probs=107.7
Q ss_pred HhhCCCHHHHHHHHHHHHHHhhhhh-hhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHh
Q 021692 44 SSLNYNQKQIARLGVAKDLGDSVGF-LAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNN 122 (309)
Q Consensus 44 ~~lg~s~~~~~~i~~~~~vg~~~~~-~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~ 122 (309)
+.++.+.....+..+...+|..+|. +.|.++||+|||++++++.++..++-.+.++ +++++.++++.++.|.
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~-------a~~~~~~~~~Rfl~G~ 183 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAF-------APNYWMFLIFRFLSGF 183 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHH-------hCcHHHHHHHHHHHHh
Confidence 5566677777777788888888865 8999999999999999999988866544433 2479999999999999
Q ss_pred chhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 021692 123 GETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMVVIALMFIIRPVGGH 201 (309)
Q Consensus 123 g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~~~~~~~l~la~~~~~v~l~~~~~ir~~p~~ 201 (309)
+.+...+.....++++++ ++|+.+..+ ..+.-.++.+..+....+.+ +++.+.+...+. ..+.++..++.++.|++
T Consensus 184 ~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~-~Wr~~~~~~~~~-~~~~~~~~~l~~Es~rw 260 (521)
T KOG0255|consen 184 FGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR-DWRWLFWIISIP-SGLFLLLWFLPPESPRW 260 (521)
T ss_pred hccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHH-HHHHHHHHHccCcChHH
Confidence 998888899999999998 779999999 55554555555555554444 555555444443 33333334455455544
No 133
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.71 E-value=7.7e-07 Score=85.41 Aligned_cols=141 Identities=9% Similarity=0.051 Sum_probs=88.6
Q ss_pred CCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchh
Q 021692 47 NYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGET 125 (309)
Q Consensus 47 g~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~ 125 (309)
+.+..+.+.+.+...+...+ ....|++.||+|+|+.+.++.++..+++.++.. . ++.|.+.+...+.+.+..
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~--~-----~~~~~~~~~~~l~g~~~~ 322 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSF--A-----TTALEVVILKMLHAFEVP 322 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh--c-----CChHHHHHHHHHHHHHHH
Confidence 55656666666555555544 558899999999999999999888887766443 2 145555555555555555
Q ss_pred hhhhhHHHHHhhhcC-CCCCcchhh-hhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHHHHHHHHHhh
Q 021692 126 YFNTAALVSCVQNFP-KSRGPVVGI-LKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAMVVIALMFI 194 (309)
Q Consensus 126 ~~~~~~~~~~~~~FP-~~RG~avGi-~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~~v~l~~~~~ 194 (309)
...........+.+| +.|+++.+. .....++|+++.+.+...+.+. +....+++.++...+.++++.+.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~ 394 (396)
T TIGR00882 323 FLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVFT 394 (396)
T ss_pred HHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh
Confidence 554444445556676 346665554 3345567877777666655543 44444556676666666665543
No 134
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.71 E-value=3.3e-07 Score=86.36 Aligned_cols=117 Identities=14% Similarity=0.159 Sum_probs=81.9
Q ss_pred hHHHHHHhhCCCHHHHHHHHHHHH-HHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCC----CCChhHH
Q 021692 38 ISPVIKSSLNYNQKQIARLGVAKD-LGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGR----APVLPLW 111 (309)
Q Consensus 38 ys~~l~~~lg~s~~~~~~i~~~~~-vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~----i~~~s~~ 111 (309)
+.+.+-+++|++.++.+.+..... ++..+ .+++|++.||+|+|+.+.++.++..+++.++.+..... ...++.|
T Consensus 231 ~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (356)
T TIGR00901 231 LTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLL 310 (356)
T ss_pred HHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHH
Confidence 344443349999999887655433 44444 45899999999999999988888877776554432111 0002456
Q ss_pred HHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhh
Q 021692 112 AMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFA 154 (309)
Q Consensus 112 ~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~ 154 (309)
.+.....+.+.+.+..+.+......+.+| ++||+..|+..+..
T Consensus 311 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 354 (356)
T TIGR00901 311 MLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLS 354 (356)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHH
Confidence 66656666677788888889999999999 66999999966544
No 135
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.70 E-value=3.2e-07 Score=91.16 Aligned_cols=158 Identities=14% Similarity=0.083 Sum_probs=117.0
Q ss_pred HHHHHhhC--CCHHHHHHH----HHHHHHHhhhh-hhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHH
Q 021692 40 PVIKSSLN--YNQKQIARL----GVAKDLGDSVG-FLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWA 112 (309)
Q Consensus 40 ~~l~~~lg--~s~~~~~~i----~~~~~vg~~~~-~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~ 112 (309)
..+.+++| .|..+++.+ .+...+|..+| ..+|+++||+|||..+.+..++..++-.++.++... +++..
T Consensus 43 ~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~----~~~e~ 118 (485)
T KOG0569|consen 43 ETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSA----PSFEM 118 (485)
T ss_pred HHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHh----hhHHH
Confidence 45566777 555555554 23334677774 489999999999999999998888777777655433 35777
Q ss_pred HHHHHHHHHhchhhhhhhHHHHHhhhcCC-CCCcchhhhhhhhhhhHHHHHHHH-HHHccC-ChHHHHHHHHHHHHHHHH
Q 021692 113 MCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVY-TMIHAP-DHANLIFMVAVGPAMVVI 189 (309)
Q Consensus 113 l~~~~~l~g~g~~~~~~~~~~~~~~~FP~-~RG~avGi~~~~~GLg~ai~~~i~-~~~~~~-~~~~~~l~la~~~~~v~l 189 (309)
+.+...+.|+.++.......+...|.=|+ .||....+...+..+|..+...+. ..++++ +.+.|++....+++++.+
T Consensus 119 li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l 198 (485)
T KOG0569|consen 119 LILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQL 198 (485)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHH
Confidence 77888899999998888888899999995 599999887777766666554443 234443 456677777888888888
Q ss_pred HHHhhcccCCCC
Q 021692 190 ALMFIIRPVGGH 201 (309)
Q Consensus 190 ~~~~~ir~~p~~ 201 (309)
+..+++.+.|++
T Consensus 199 ~~l~~~PESPk~ 210 (485)
T KOG0569|consen 199 ALLPFLPESPKY 210 (485)
T ss_pred HHHhcCCCCcch
Confidence 888888887765
No 136
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.70 E-value=9.9e-07 Score=86.06 Aligned_cols=155 Identities=16% Similarity=0.144 Sum_probs=109.5
Q ss_pred hhccchHHHHHHHHHHHHHhhhhh-hHHhhHHHHHHhhCCCHHHHHHHHHHHHHHh-hhhhhhhhhccccchHHHHHHHH
Q 021692 10 SFFNNRWLVFVAAMWIQSCAGIGY-LFGSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGA 87 (309)
Q Consensus 10 ~~~~~rw~~l~~~~l~~~~~g~~Y-~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~-~~~~~~G~L~Dr~Gpr~vllig~ 87 (309)
+..++||..|++..+..+.++.+. .|+..+....+.|| +.....+.+.+..+.. -+++++=|+.|++|-|...++|+
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 467899999998888887777643 23444556677788 5555555555444444 44778999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCChhHH--HHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHH
Q 021692 88 LQNFIGYGWVWLIVTGRAPVLPLW--AMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQV 164 (309)
Q Consensus 88 ~l~~~gy~l~~l~~~~~i~~~s~~--~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i 164 (309)
+++++|..+=..+....++ +.+| .......+.+..+.++..-.-....-||| ++|..|..+-..++.+|.++...+
T Consensus 117 ~ln~iGa~Ir~iss~p~v~-~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~ll 195 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVP-PLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLL 195 (480)
T ss_pred HHHHHHHHHhhhccCcccc-ccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhc
Confidence 9999997654333222232 2456 33344566666677776666677889999 779999999777777999887554
Q ss_pred HH
Q 021692 165 YT 166 (309)
Q Consensus 165 ~~ 166 (309)
-.
T Consensus 196 pp 197 (480)
T KOG2563|consen 196 PP 197 (480)
T ss_pred cc
Confidence 43
No 137
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.70 E-value=3.2e-07 Score=91.31 Aligned_cols=136 Identities=15% Similarity=0.129 Sum_probs=79.8
Q ss_pred hhhhHHhhHHHHHHhhCCCHHHHHH----------H--HHHHHHHhhhh-hhhhhhccccchHHHHHHHHHHHHHHHHHH
Q 021692 31 IGYLFGSISPVIKSSLNYNQKQIAR----------L--GVAKDLGDSVG-FLAGSLCEVLPIWGALLVGALQNFIGYGWV 97 (309)
Q Consensus 31 ~~Y~fsvys~~l~~~lg~s~~~~~~----------i--~~~~~vg~~~~-~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~ 97 (309)
..|....|.|.+-++.|++..+.+. + .....++...+ ++.|++.||+|||++++++.+...++..+.
T Consensus 303 ~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l 382 (502)
T TIGR00887 303 AFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVL 382 (502)
T ss_pred HHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHH
Confidence 4566667777776778886542111 0 11222233333 478999999999999988887777665555
Q ss_pred HHHHhCCCCChhHHHHHH-HHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 98 WLIVTGRAPVLPLWAMCI-LIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 98 ~l~~~~~i~~~s~~~l~~-~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
...... .+......++. +....+. +. +........|.|| +.||++.|+..+...+++++.+.+.....+
T Consensus 383 ~~~~~~-~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~ 453 (502)
T TIGR00887 383 GFAYNH-LSTHGFLAIYVLAQFFANF--GP-NATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQ 453 (502)
T ss_pred HHHHHh-cchhHHHHHHHHHHHHHhc--CC-CchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhc
Confidence 433221 11111111111 1111111 11 1223334579999 559999999998888998888877766654
No 138
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.69 E-value=8e-07 Score=86.79 Aligned_cols=158 Identities=12% Similarity=0.103 Sum_probs=84.0
Q ss_pred hHHhhHHH-HHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhcccc--chH-HHHHHHHHHHHHHHHHHHHHHhCCCCCh
Q 021692 34 LFGSISPV-IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVL--PIW-GALLVGALQNFIGYGWVWLIVTGRAPVL 108 (309)
Q Consensus 34 ~fsvys~~-l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~--Gpr-~vllig~~l~~~gy~l~~l~~~~~i~~~ 108 (309)
.+..+.|. +++++|+|..+.+.......++..+ .++.|++.||+ ++| .......+........+.+.... .
T Consensus 261 ~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~----~ 336 (434)
T PRK11663 261 AINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFA----S 336 (434)
T ss_pred HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccc----c
Confidence 34445544 4677899999988776666666666 55899999999 333 32222222222222222221111 1
Q ss_pred hHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHHH
Q 021692 109 PLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAM 186 (309)
Q Consensus 109 s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~~ 186 (309)
..+....+.. .|.+.............+.+| ++||+++|+.....-+|+++.+++...+.+. +....+...++..++
T Consensus 337 ~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~ 415 (434)
T PRK11663 337 YVMQAACFFT-IGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGI 415 (434)
T ss_pred HHHHHHHHHH-HHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHH
Confidence 1222222222 222111111112234568898 6799999999888889988888777666542 333333444444333
Q ss_pred HHHHHHhhcc
Q 021692 187 VVIALMFIIR 196 (309)
Q Consensus 187 v~l~~~~~ir 196 (309)
.+++...+.|
T Consensus 416 ~~~~~~~~~~ 425 (434)
T PRK11663 416 SALLLLPFLN 425 (434)
T ss_pred HHHHHHHHHh
Confidence 3333333444
No 139
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.69 E-value=2.3e-06 Score=82.69 Aligned_cols=131 Identities=8% Similarity=-0.091 Sum_probs=88.0
Q ss_pred hhHHhhH-HHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHH-HHHHHHHHHHhCCCCChh
Q 021692 33 YLFGSIS-PVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNF-IGYGWVWLIVTGRAPVLP 109 (309)
Q Consensus 33 Y~fsvys-~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~-~gy~l~~l~~~~~i~~~s 109 (309)
+.+..|. |.+.+++|++..+.+.+.....++..+ +.+.|++.||.+ |+.+.++..+.. .+..+... . ++
T Consensus 233 ~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~--~-----~~ 304 (394)
T PRK10213 233 FAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLW--G-----SD 304 (394)
T ss_pred HHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHH--h-----hh
Confidence 3333444 667778899999888876666666666 558999999965 444444444333 33333221 1 14
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHccC
Q 021692 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAP 171 (309)
Q Consensus 110 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~ 171 (309)
.|.+.....+.|.+.+..+......+.+..|++++.+.++..+...+|..+.+.+...+++.
T Consensus 305 ~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~ 366 (394)
T PRK10213 305 KIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDN 366 (394)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 56665666667777777777777778888998888888877777778888888777776653
No 140
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.68 E-value=3.8e-06 Score=80.33 Aligned_cols=59 Identities=7% Similarity=-0.022 Sum_probs=46.7
Q ss_pred HHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHH
Q 021692 41 VIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWL 99 (309)
Q Consensus 41 ~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l 99 (309)
.+++++|++..+.+.......++..+ .++.|++.||+|+|+++.++..+..++...+..
T Consensus 229 ~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~ 288 (392)
T PRK10473 229 LLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLAL 288 (392)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 35678899998888776655565555 558999999999999999999888877766654
No 141
>PRK09669 putative symporter YagG; Provisional
Probab=98.68 E-value=4e-06 Score=82.03 Aligned_cols=122 Identities=12% Similarity=0.014 Sum_probs=78.8
Q ss_pred HHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccc----cchH-HHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHH
Q 021692 40 PVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEV----LPIW-GALLVGALQNFIGYGWVWLIVTGRAPVLPLWAM 113 (309)
Q Consensus 40 ~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr----~Gpr-~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l 113 (309)
..+.+.+|+|..+++.+.++.-+...+ .++.|.++|| +|+| +.+++|++...+...+.+... +.......+..
T Consensus 34 ~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p-~~~~~~~~~~~ 112 (444)
T PRK09669 34 YFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTP-DFGATGKIIYA 112 (444)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCC-CCCcchHHHHH
Confidence 446888999999999998877777766 7799999999 6764 556677777766654443321 11001123444
Q ss_pred HHHHHHHHhchhhhhhhHHHHHhhhcC--CCCCcchhhhhhhhhhhHHHHH
Q 021692 114 CILIFVGNNGETYFNTAALVSCVQNFP--KSRGPVVGILKGFAGLGGAILT 162 (309)
Q Consensus 114 ~~~~~l~g~g~~~~~~~~~~~~~~~FP--~~RG~avGi~~~~~GLg~ai~~ 162 (309)
++...+.+.+.+..+.+......++.+ ++|+...+....+..+|+.+.+
T Consensus 113 ~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~ 163 (444)
T PRK09669 113 CVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVS 163 (444)
T ss_pred HHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444454555677777777778885 5588777776555555555543
No 142
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.67 E-value=1e-06 Score=84.91 Aligned_cols=131 Identities=11% Similarity=0.063 Sum_probs=85.9
Q ss_pred hhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChh
Q 021692 31 IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (309)
Q Consensus 31 ~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s 109 (309)
..+....+.|.+-+++|++..+.+...+...++..+ .++.|++.||+|+|++..++..+..+++.++.. ... +
T Consensus 220 ~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~-~~~-----~ 293 (393)
T PRK09705 220 GYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIW-LPL-----Q 293 (393)
T ss_pred HHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH-ccc-----h
Confidence 344555566666556899999888877776677666 458999999999999999888777777655432 111 1
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhhcC--CCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFP--KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 110 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP--~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
...+. ..+.|.+.+..+........+.+| ++||++.|+..+...+++.+.+.+...+.
T Consensus 294 ~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~ 353 (393)
T PRK09705 294 LPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLR 353 (393)
T ss_pred HHHHH--HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11121 123344444444445545566674 46999999987777777776666655444
No 143
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.67 E-value=1.3e-06 Score=83.65 Aligned_cols=150 Identities=13% Similarity=0.053 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHH-HHhhh-hhhhhhhccccchHHHHHHHHHHHHHHH
Q 021692 17 LVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKD-LGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGY 94 (309)
Q Consensus 17 ~~l~~~~l~~~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~-vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy 94 (309)
..+...++.+......|.+ +.+.++ +.|++.++++.+..... ....+ ..+.|++.||+|+|+++.++.++.....
T Consensus 212 ~~~~~~~l~~~~~~~~~~~--~~~~l~-~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~ 288 (390)
T TIGR02718 212 SLLALALLSAMTAVSGFGL--SKLYLV-DAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLA 288 (390)
T ss_pred HHHHHHHHHHHHHHHHHHH--hhHHHH-hcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 3344343434434444443 234454 57999999988765443 34445 4589999999999999988776653332
Q ss_pred HHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC--CCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 95 GWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP--KSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 95 ~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP--~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
.. +.........++.+.+.....+.+.+.+....+.....++..+ ++||+..++..+..++|..+.+.+...+.+
T Consensus 289 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~ 365 (390)
T TIGR02718 289 LL-WFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTD 365 (390)
T ss_pred HH-HHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 2221211111123333333334444455555555666667765 468999999999999999888877665554
No 144
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.67 E-value=3.6e-06 Score=80.54 Aligned_cols=124 Identities=13% Similarity=0.202 Sum_probs=83.2
Q ss_pred HHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHH-HhCCCCChhHHHHHHHHH
Q 021692 41 VIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLI-VTGRAPVLPLWAMCILIF 118 (309)
Q Consensus 41 ~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~-~~~~i~~~s~~~l~~~~~ 118 (309)
.+++.+|++..+.+.......++..+ +.+.|++.||+|++... +......+...+... .... .+.|.+....+
T Consensus 233 ~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 307 (394)
T PRK11652 233 LMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQ--SVICCLLAGLLMWIPGWFGV---MNVWTLLVPAA 307 (394)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcc---ccHHHHHHHHH
Confidence 45667999999888876666666655 45789999999843332 222222222222111 1111 13555555566
Q ss_pred HHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 119 VGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 119 l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
+.+.|.+..+........+.+|+++|.+.++..+...+|+++.+.+.....
T Consensus 308 ~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~ 358 (394)
T PRK11652 308 LFFFGAGMLFPLATSGAMEPFPYLAGTAGALLGGLQNIGSGLAALLSAMLP 358 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 677777877777777788999999999999999888899998888765443
No 145
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.66 E-value=4.5e-07 Score=85.89 Aligned_cols=125 Identities=18% Similarity=0.195 Sum_probs=83.6
Q ss_pred HHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHH-HHHHHHHHHhCCCCChhHHHHHHH
Q 021692 39 SPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFI-GYGWVWLIVTGRAPVLPLWAMCIL 116 (309)
Q Consensus 39 s~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~-gy~l~~l~~~~~i~~~s~~~l~~~ 116 (309)
.+.+++++|++..+.+.+.....++..+ .++.|++.||+|+|+.+.++.+...+ ...++. . + .+.+.+.+.
T Consensus 262 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~--~-~----~~~~~~~~~ 334 (405)
T TIGR00891 262 PTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFA--I-G----ANVAVLGLG 334 (405)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHH--h-C----CchHHHHHH
Confidence 3456778999999998887766677666 55899999999999998888766532 222221 1 1 134444333
Q ss_pred HHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 117 IFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 117 ~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
..+.+...+.........+.+.+| ++||++.|+......+|+++.+++...+.+
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~ 389 (405)
T TIGR00891 335 LFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQ 389 (405)
T ss_pred HHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 233222222233344456679999 679999999888887888888877766554
No 146
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.66 E-value=2.3e-06 Score=82.91 Aligned_cols=159 Identities=14% Similarity=0.091 Sum_probs=102.2
Q ss_pred hhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhhh-hhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 021692 29 AGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSVG-FLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPV 107 (309)
Q Consensus 29 ~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~~-~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~ 107 (309)
.|..-.|+-..|.+++..|+|.++++.+.....++..+| .++|++.|| ++|+.+.....+..+.+..+.+ .+.
T Consensus 225 ~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~--~~~--- 298 (394)
T COG2814 225 TGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTF--TGA--- 298 (394)
T ss_pred cchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHH--hcc---
Confidence 333333443458889999999999999888877888775 499999999 9999999888888777666543 332
Q ss_pred hhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHccCChHHHHHHHHHHHHHH
Q 021692 108 LPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMV 187 (309)
Q Consensus 108 ~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~~~~~~~l~la~~~~~v 187 (309)
+.+.......+.|...+.....-.+-..+..|++++.+.++..+.+.+|-++.+.+-...+++....+....+....+.
T Consensus 299 -~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~ 377 (394)
T COG2814 299 -SPALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLL 377 (394)
T ss_pred -hHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHH
Confidence 3455444444445444444445555666777899999999987766676666655554444432222222334333334
Q ss_pred HHHHHhh
Q 021692 188 VIALMFI 194 (309)
Q Consensus 188 ~l~~~~~ 194 (309)
++...+.
T Consensus 378 a~~~~~~ 384 (394)
T COG2814 378 ALLLALL 384 (394)
T ss_pred HHHHHHH
Confidence 4444333
No 147
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.66 E-value=5.8e-07 Score=86.90 Aligned_cols=143 Identities=17% Similarity=0.126 Sum_probs=98.1
Q ss_pred HhhhhhhHHhhHHH-HHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 021692 28 CAGIGYLFGSISPV-IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRA 105 (309)
Q Consensus 28 ~~g~~Y~fsvys~~-l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i 105 (309)
+-|..-.|+.+-|. ++++|+.+..+.+...+.......+ =+.+|+|+||+|++|++++..+.+.++.....+..++.-
T Consensus 230 tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~ 309 (417)
T COG2223 230 TFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFG 309 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccc
Confidence 34545556666644 5999999999988776655444444 568999999999999998888877765555444332211
Q ss_pred CChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 106 PVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 106 ~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
..++.+..........+..+..|.++...+...||++-|.+.|+..+.-|+|+...+..+....+
T Consensus 310 ~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~ 374 (417)
T COG2223 310 HGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLD 374 (417)
T ss_pred cCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHH
Confidence 01233333332233344555667777788889999999999999999999999777777665553
No 148
>TIGR00895 2A0115 benzoate transport.
Probab=98.65 E-value=6.7e-07 Score=84.22 Aligned_cols=129 Identities=16% Similarity=0.049 Sum_probs=90.3
Q ss_pred hhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChh
Q 021692 31 IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (309)
Q Consensus 31 ~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s 109 (309)
..+....+.|.+.+++|++..+.+.......++..+ .++.|++.||+|+|++.....+.....+.+.. . .. +
T Consensus 265 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~-----~ 337 (398)
T TIGR00895 265 GVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGS-T-LF-----S 337 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHH-H-hh-----C
Confidence 344555667778888999999888877766666666 55899999999999555444443334443332 1 11 3
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHH
Q 021692 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYT 166 (309)
Q Consensus 110 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~ 166 (309)
.+......++.|.+.+..++.......+.+| ++||.+.|+..+...+|+++.+.+..
T Consensus 338 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G 395 (398)
T TIGR00895 338 PTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAG 395 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 4444445556666777777777788889999 66999999988888888887766544
No 149
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.63 E-value=1.8e-06 Score=93.70 Aligned_cols=118 Identities=19% Similarity=0.171 Sum_probs=88.7
Q ss_pred hHHHHHHhhCCCHH-HHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHH
Q 021692 38 ISPVIKSSLNYNQK-QIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCI 115 (309)
Q Consensus 38 ys~~l~~~lg~s~~-~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~ 115 (309)
+...+++.+|++.. +.+.+.....++..+ +++.|++.||+++++++.++.++.+++..++.+. . +.+.+++
T Consensus 255 ~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~ 327 (1146)
T PRK08633 255 FPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTA--P-----SLASVLV 327 (1146)
T ss_pred hHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHh--h-----hHHHHHH
Confidence 33456788999998 888887777777766 5589999999999999888888777766555432 1 4566656
Q ss_pred HHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHH
Q 021692 116 LIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILT 162 (309)
Q Consensus 116 ~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~ 162 (309)
..++.|.+.+....+......+.+| ++||.+.|+......+|+++..
T Consensus 328 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~ 375 (1146)
T PRK08633 328 LFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFL 375 (1146)
T ss_pred HHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHH
Confidence 6666777777777777777789998 6699999998777767765443
No 150
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.63 E-value=4.9e-06 Score=79.65 Aligned_cols=125 Identities=15% Similarity=0.081 Sum_probs=76.5
Q ss_pred HHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHH
Q 021692 40 PVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIF 118 (309)
Q Consensus 40 ~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~ 118 (309)
+.+++.+|++..+.+.+.+...++..+ .++.|++.||+|+|+.+.++..+..+++.++... .. +.+...+...
T Consensus 224 ~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~-~~-----~~~~~~~~~~ 297 (382)
T PRK10091 224 PYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFF-GG-----MKTASLIFAF 297 (382)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHH-Hh-----hHHHHHHHHH
Confidence 556777999999998887766676666 5689999999999999998888877776554322 21 2233222222
Q ss_pred HHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 119 VGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 119 l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
+.+.|......+......+..++.|..+.+.......+|.++.+.+...+++
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~Gp~~~G~l~~ 349 (382)
T PRK10091 298 ICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAIGAYCGGMMLT 349 (382)
T ss_pred HHHHHHHhhhHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 3333332233333334445554333333333345556888888777666554
No 151
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.60 E-value=2.7e-06 Score=81.30 Aligned_cols=122 Identities=10% Similarity=0.020 Sum_probs=78.9
Q ss_pred HHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHH
Q 021692 39 SPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILI 117 (309)
Q Consensus 39 s~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~ 117 (309)
.|.+.++.|.+..+.+.......++..+ ..+.|++.||+|+|+++.++.....++...+. .. ...+. ..
T Consensus 223 lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~---~~----~~~~~---~~ 292 (381)
T PRK03633 223 MPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML---SQ----AAMAP---AL 292 (381)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh---hh----HHHHH---HH
Confidence 4555456799988887766655555555 55899999999999999888877777654432 11 11111 11
Q ss_pred HHHHhchhhhhhhHHHHHhhhcCC-CCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 118 FVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 118 ~l~g~g~~~~~~~~~~~~~~~FP~-~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
.+.+.+.....+.......++.|+ +++.+.+......++|+++.+.+...+.+
T Consensus 293 ~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~ 346 (381)
T PRK03633 293 FILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQ 346 (381)
T ss_pred HHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222333333445555666788984 56777777666777888888877665554
No 152
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.55 E-value=7e-06 Score=80.07 Aligned_cols=177 Identities=19% Similarity=0.225 Sum_probs=112.2
Q ss_pred chHHH-HHHHHHHHHHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHH
Q 021692 14 NRWLV-FVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNF 91 (309)
Q Consensus 14 ~rw~~-l~~~~l~~~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~ 91 (309)
++... ++.+++++...+..|.|. +.++++.-|++....+.+.+.+.+.... ....+++..|+|.|++++++.+...
T Consensus 207 ~~~~~Fll~~~l~~~~~~~~~~f~--~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~ 284 (400)
T PF03825_consen 207 PRFLVFLLAAFLIGISHAAYYTFF--SIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYA 284 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHH--HHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 33444 344444456666666653 2335654447777667666666666665 4589999999999999999999888
Q ss_pred HHHHHHHHHHhCCCCChhHHHHHHH----HHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhh-hhhhhHHHHHHHH
Q 021692 92 IGYGWVWLIVTGRAPVLPLWAMCIL----IFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKG-FAGLGGAILTQVY 165 (309)
Q Consensus 92 ~gy~l~~l~~~~~i~~~s~~~l~~~----~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~-~~GLg~ai~~~i~ 165 (309)
+=+.+++... . +.|..... ..+=|..-+.+..++...+.++.| +.|+++.|+..+ .+|+|+++.+.+.
T Consensus 285 vR~~l~a~~~-~-----~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~ig 358 (400)
T PF03825_consen 285 VRWLLYAYFS-D-----PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIG 358 (400)
T ss_pred HHHHHHHHhc-C-----CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHH
Confidence 8877765421 1 22222111 223445556678888888999999 559999999655 5789988887766
Q ss_pred HHHccC-------ChHHHHHHHHHHHHHHHHHHHhhcccC
Q 021692 166 TMIHAP-------DHANLIFMVAVGPAMVVIALMFIIRPV 198 (309)
Q Consensus 166 ~~~~~~-------~~~~~~l~la~~~~~v~l~~~~~ir~~ 198 (309)
..+++. +...++...+++.+++.++..++.|++
T Consensus 359 G~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 359 GWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 655532 233444444444444444545555654
No 153
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.55 E-value=5.1e-06 Score=82.82 Aligned_cols=147 Identities=8% Similarity=0.011 Sum_probs=91.8
Q ss_pred hHHHHHHHHHHHHHhhhhhhHHhhH---HHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhcc----ccchHHHHHHH
Q 021692 15 RWLVFVAAMWIQSCAGIGYLFGSIS---PVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCE----VLPIWGALLVG 86 (309)
Q Consensus 15 rw~~l~~~~l~~~~~g~~Y~fsvys---~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~D----r~Gpr~vllig 86 (309)
+|..+..+ +...|..+.|++.. +++.+++|.+..+.+.+..+..+...+ .++.|+++| |+|||+..+++
T Consensus 3 ~~~li~~~---~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~ 79 (477)
T TIGR01301 3 LRKLLRVA---SVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAA 79 (477)
T ss_pred HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHH
Confidence 45554333 23445555565443 445678999999999887766665555 779999999 59999998775
Q ss_pred -HHHHHHHHHHHHHHHh------CCCC-ChhH---HHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCC--Ccchhhhhh
Q 021692 87 -ALQNFIGYGWVWLIVT------GRAP-VLPL---WAMCILIFVGNNGETYFNTAALVSCVQNFP-KSR--GPVVGILKG 152 (309)
Q Consensus 87 -~~l~~~gy~l~~l~~~------~~i~-~~s~---~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~R--G~avGi~~~ 152 (309)
.+...+++.++...-+ .+.. .... +...+...+...+......+.-....+.+| ++| +.+.++...
T Consensus 80 g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~ 159 (477)
T TIGR01301 80 GAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSF 159 (477)
T ss_pred HHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHH
Confidence 5555566666543211 0000 0011 222222333444566667777788889999 434 678888878
Q ss_pred hhhhhHHHHHHH
Q 021692 153 FAGLGGAILTQV 164 (309)
Q Consensus 153 ~~GLg~ai~~~i 164 (309)
+.++|+.+...+
T Consensus 160 ~~~lG~ilg~~~ 171 (477)
T TIGR01301 160 FMAIGNVLGYAA 171 (477)
T ss_pred HHHHHHHHHHHH
Confidence 888887776543
No 154
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.54 E-value=6.1e-06 Score=79.67 Aligned_cols=135 Identities=13% Similarity=0.060 Sum_probs=91.4
Q ss_pred HHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHH
Q 021692 40 PVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIF 118 (309)
Q Consensus 40 ~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~ 118 (309)
+.+++.+|++..+.+.+.....++..+ ++..|++.||.++|+++..|..+ ......+ ... +++|.......
T Consensus 230 ~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~-~~~~~~~--~~~-----~~~~~~~~~~~ 301 (393)
T PRK11195 230 AWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGILM-GLVVLLM--ALQ-----HSLLPAYPLLI 301 (393)
T ss_pred HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHH-HHHHHHH--HHH-----hHHHHHHHHHH
Confidence 346778999999999888877788777 56899999999999988877543 3332222 222 24555555555
Q ss_pred HHHhchhhhhhhHHHHHhhhcCCC--CCcchhhhhhhhhhhHHHHHHHHHHHccC--ChHHHHHHHHH
Q 021692 119 VGNNGETYFNTAALVSCVQNFPKS--RGPVVGILKGFAGLGGAILTQVYTMIHAP--DHANLIFMVAV 182 (309)
Q Consensus 119 l~g~g~~~~~~~~~~~~~~~FP~~--RG~avGi~~~~~GLg~ai~~~i~~~~~~~--~~~~~~l~la~ 182 (309)
+.|.+.+..+.+..+...+.-|++ ||.+.|+......++..+...++.....- .+..++..++.
T Consensus 302 ~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (393)
T PRK11195 302 LIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVIVGFGL 369 (393)
T ss_pred HHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 677777877777777777776653 68899888877777777776666544322 35544444444
No 155
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.54 E-value=8.7e-07 Score=88.69 Aligned_cols=143 Identities=19% Similarity=0.167 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhh
Q 021692 51 KQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNT 129 (309)
Q Consensus 51 ~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~ 129 (309)
++.+++.+...++..+ ++++|++.|++|||+.++++.+...+|..+...+ ++++.+.+...+.|.|.|....
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a-------~~~~~l~~GR~l~G~g~G~~~~ 161 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALA-------PSWYQLIVGRILTGLGVGGASV 161 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHHHhccchhhhhh
Confidence 3457888878888877 5699999999999999999999999999888663 3688888889999999999988
Q ss_pred hHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccCC--hHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 021692 130 AALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAPD--HANLIFMVAVGPAMVVIALMFIIRPVGGH 201 (309)
Q Consensus 130 ~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~~--~~~~~l~la~~~~~v~l~~~~~ir~~p~~ 201 (309)
.......+.=| +.||.-+++......+| .+.+.+.....++. .+.+.+.++.++.++..++++++.+.|.+
T Consensus 162 ~~piy~sEiap~~~RG~l~~~~~l~~~~G-i~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~ 235 (513)
T KOG0254|consen 162 LAPVYISEIAPAHIRGTLVSLYQLFITIG-ILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRW 235 (513)
T ss_pred cchhhHhhcCChhhhHHHHHHHHHHHHHH-HHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHH
Confidence 88888999999 46999999988888644 44445545444432 34456667777777766666676666644
No 156
>PRK10133 L-fucose transporter; Provisional
Probab=98.52 E-value=6.9e-06 Score=80.72 Aligned_cols=119 Identities=13% Similarity=0.019 Sum_probs=87.4
Q ss_pred HHhhCCCHHHHHHHHHHHHHHhhhh-hhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHH
Q 021692 43 KSSLNYNQKQIARLGVAKDLGDSVG-FLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGN 121 (309)
Q Consensus 43 ~~~lg~s~~~~~~i~~~~~vg~~~~-~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g 121 (309)
++.+|+|..+.+.......++..++ .+.|++.||+|+|+++.++.++...+..+..+ .. +.+.+ ....+.|
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~--~~-----~~~~~-~~~~l~g 358 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAF--AG-----GHVGL-IALTLCS 358 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH--cC-----ChHHH-HHHHHHH
Confidence 5678999999998877777777774 58999999999999998887776655443322 22 11222 2334567
Q ss_pred hchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 122 NGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 122 ~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
.|.+..+........+.+|++.|.+.++..... +|+++.+++...+.+
T Consensus 359 lg~~~i~P~~~s~a~~~~~~~~~~as~l~~~~~-~g~~~~~~i~G~l~~ 406 (438)
T PRK10133 359 AFMSIQYPTIFSLGIKNLGQDTKYGSSFIVMTI-IGGGIVTPVMGFVSD 406 (438)
T ss_pred HHHHHHHHHHHHHHHcccchhhccchhHHhHHh-ccchHHHHHHHHHHH
Confidence 788888888888899999998889999886544 778888877765544
No 157
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.52 E-value=2.4e-06 Score=84.19 Aligned_cols=129 Identities=9% Similarity=-0.044 Sum_probs=86.6
Q ss_pred hhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccc--cchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHH
Q 021692 37 SISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEV--LPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAM 113 (309)
Q Consensus 37 vys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr--~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l 113 (309)
.|.+.+.+++|++..+.+.+.+...++..+ .++.|++.|| +++|+...++..+...+...+.....+ ++|.+
T Consensus 262 ~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~-----~~~~~ 336 (455)
T TIGR00892 262 IFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAG-----DYTGL 336 (455)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhc-----hHHHH
Confidence 344555456899999988877666666655 5689999998 455655554443333332222222222 46666
Q ss_pred HHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 114 CILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 114 ~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
.++..+.|.+.+..++.....+.+.+| ++||++.|+..+...+|+++.+.+...+.+
T Consensus 337 ~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~ 394 (455)
T TIGR00892 337 VIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVD 394 (455)
T ss_pred HHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeeh
Confidence 666666677777777777777788898 569999999999998988888877665543
No 158
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.52 E-value=8.9e-06 Score=82.05 Aligned_cols=118 Identities=18% Similarity=0.158 Sum_probs=90.2
Q ss_pred HHH-HHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHH
Q 021692 40 PVI-KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILI 117 (309)
Q Consensus 40 ~~l-~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~ 117 (309)
|.+ ++.+|.+....+.+..+..+|..+ +.+.+++.+|+++++++..+.+..+++...+.+ . ++.|..+...
T Consensus 242 Pl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal--~-----~~~~~~~~~l 314 (524)
T PF05977_consen 242 PLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLAL--S-----PSFWLALIAL 314 (524)
T ss_pred hHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhc--c-----hHHHHHHHHH
Confidence 444 778999999999998888888888 558899999999999988888777776655543 1 3678777777
Q ss_pred HHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHH
Q 021692 118 FVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQV 164 (309)
Q Consensus 118 ~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i 164 (309)
++.|.+....++...+...+.-| +.||++.++..+....+.++.+.+
T Consensus 315 ~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll 362 (524)
T PF05977_consen 315 FLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLL 362 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 78888877888888888889999 559999999765553444444333
No 159
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.52 E-value=3.6e-05 Score=77.71 Aligned_cols=121 Identities=18% Similarity=0.172 Sum_probs=89.7
Q ss_pred HHHHhhCCCHHHHHHHHHHHHHHhh-hhhhhhhhccccchHHHHHHHHHHHHHHHHHHH-HHHhCCCCChhHHHHHHHHH
Q 021692 41 VIKSSLNYNQKQIARLGVAKDLGDS-VGFLAGSLCEVLPIWGALLVGALQNFIGYGWVW-LIVTGRAPVLPLWAMCILIF 118 (309)
Q Consensus 41 ~l~~~lg~s~~~~~~i~~~~~vg~~-~~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~-l~~~~~i~~~s~~~l~~~~~ 118 (309)
-+..++.-|...++.+.++..+-.. +++++|.+.||+.+|++++.+-+...+....+. +...+. .+.|.++++.+
T Consensus 35 wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~---~~~~~Ll~~~f 111 (524)
T PF05977_consen 35 WLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGL---LSPWLLLILTF 111 (524)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCc---CCHHHHHHHHH
Confidence 3444556677788888777777664 488999999999999999999887764443333 334453 36899988888
Q ss_pred HHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHH
Q 021692 119 VGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQV 164 (309)
Q Consensus 119 l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i 164 (309)
+.|++.++.+++-...+.+..| ++-..+.++......++..+.+.+
T Consensus 112 l~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPal 158 (524)
T PF05977_consen 112 LLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPAL 158 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchH
Confidence 9999999999999999999999 457777887665554555544433
No 160
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.51 E-value=5.3e-06 Score=80.79 Aligned_cols=158 Identities=11% Similarity=0.117 Sum_probs=100.3
Q ss_pred HHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhcc----ccchHHH-HHHHHHHHHHHHHHHHHH-HhCCCCChhHHH
Q 021692 40 PVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCE----VLPIWGA-LLVGALQNFIGYGWVWLI-VTGRAPVLPLWA 112 (309)
Q Consensus 40 ~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~D----r~Gpr~v-llig~~l~~~gy~l~~l~-~~~~i~~~s~~~ 112 (309)
+.+.+.+|.+...++.+..+.-+...+ -++.|.++| |+|||+. +++|.+...+++.+++.. ..+.-.....+.
T Consensus 26 ~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~ 105 (428)
T PF13347_consen 26 YFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVW 105 (428)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHH
Confidence 556888999999999987777666655 779999999 8997765 667888888888777653 111100012222
Q ss_pred HHHHHHHHHhchhhhhhhHHHHHhhhcC--CCCCcchhhhhhhhhhhHHHHHHHHHH---HccC-Ch-HHHH---HHHHH
Q 021692 113 MCILIFVGNNGETYFNTAALVSCVQNFP--KSRGPVVGILKGFAGLGGAILTQVYTM---IHAP-DH-ANLI---FMVAV 182 (309)
Q Consensus 113 l~~~~~l~g~g~~~~~~~~~~~~~~~FP--~~RG~avGi~~~~~GLg~ai~~~i~~~---~~~~-~~-~~~~---l~la~ 182 (309)
+.+...+...+.++.+.+......+..+ ++|....+....+..+|+.+.+.+... .+++ +. ..|. ...++
T Consensus 106 ~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~i 185 (428)
T PF13347_consen 106 LFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAI 185 (428)
T ss_pred HHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHH
Confidence 3333444466777888888888888887 469999998777777777544333322 3332 22 1333 33333
Q ss_pred HHHHHHHHHHhhccc
Q 021692 183 GPAMVVIALMFIIRP 197 (309)
Q Consensus 183 ~~~~v~l~~~~~ir~ 197 (309)
+..+..+++.+.+|+
T Consensus 186 v~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 186 VGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHhhhhhheeee
Confidence 333344445566777
No 161
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.49 E-value=7.4e-05 Score=71.45 Aligned_cols=160 Identities=16% Similarity=0.076 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHh--hhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHh-hhhhhhhhhccccchHHHHHHHHHHHHHH
Q 021692 17 LVFVAAMWIQSCA--GIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNFIG 93 (309)
Q Consensus 17 ~~l~~~~l~~~~~--g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~-~~~~~~G~L~Dr~Gpr~vllig~~l~~~g 93 (309)
..+++++.+-..+ -..-..+-.-+.+++++|.|.++++.+.+.-.+.. .+++++.++..|+|+++.+..+.++.++|
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G 90 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAG 90 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3444444443332 23444566668889999999999999987666544 55889999999999999999999999988
Q ss_pred HHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHcc--C
Q 021692 94 YGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHA--P 171 (309)
Q Consensus 94 y~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~--~ 171 (309)
..+=.. .+.+.++....+.|.|.+..|.-....+=|+||++-|..+|+...-.++|+++.+.+...+-+ .
T Consensus 91 ~~iR~~--------~~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~ 162 (395)
T COG2807 91 ILIRSL--------GGLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSG 162 (395)
T ss_pred HHHHhc--------ccHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhc
Confidence 654211 145666666778888888888777777889999999999999888888877776444332221 3
Q ss_pred ChHHHHHHHHHHH
Q 021692 172 DHANLIFMVAVGP 184 (309)
Q Consensus 172 ~~~~~~l~la~~~ 184 (309)
+++.-+.+.++..
T Consensus 163 gW~~aL~~WAl~a 175 (395)
T COG2807 163 GWRGALGFWALLA 175 (395)
T ss_pred cHHHHHHHHHHHH
Confidence 4555566666544
No 162
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.49 E-value=1.4e-06 Score=87.17 Aligned_cols=151 Identities=18% Similarity=0.142 Sum_probs=117.9
Q ss_pred HHHhhCCCHHHHHHHHHHHHHHhhhh-hhhhhhccccchHHHHHHHHHHHH-HHHHHHHHHHhCCCCChhHHHHHHHHHH
Q 021692 42 IKSSLNYNQKQIARLGVAKDLGDSVG-FLAGSLCEVLPIWGALLVGALQNF-IGYGWVWLIVTGRAPVLPLWAMCILIFV 119 (309)
Q Consensus 42 l~~~lg~s~~~~~~i~~~~~vg~~~~-~~~G~L~Dr~Gpr~vllig~~l~~-~gy~l~~l~~~~~i~~~s~~~l~~~~~l 119 (309)
++++.|....|.+.+.+...++..++ +++|.|.||+++.+.+....++.+ .+++..+ . .+++.+.+..++
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~---~-----~s~~~~ialr~l 143 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAA---V-----HSFPGLIALRFL 143 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH---H-----hhhHHHHHHHHH
Confidence 45788889999999988888888774 599999999997777665555444 3333322 1 168888888888
Q ss_pred HHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHcc-------CChHHHHHHHHHHHHHHHHHH
Q 021692 120 GNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA-------PDHANLIFMVAVGPAMVVIAL 191 (309)
Q Consensus 120 ~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~-------~~~~~~~l~la~~~~~v~l~~ 191 (309)
.|+..+....+....+..||. ++||..+|+..+..++|+++.+.+...+++ .+++..++.-|++.++.++++
T Consensus 144 lGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~ 223 (495)
T KOG2533|consen 144 LGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVV 223 (495)
T ss_pred HHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheE
Confidence 888888888888888999999 669999999999999999999988887542 135555667788888888888
Q ss_pred HhhcccCCC
Q 021692 192 MFIIRPVGG 200 (309)
Q Consensus 192 ~~~ir~~p~ 200 (309)
.+++++.|.
T Consensus 224 f~~lp~~P~ 232 (495)
T KOG2533|consen 224 FFFLPDNPS 232 (495)
T ss_pred EEEecCChh
Confidence 888877665
No 163
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.49 E-value=6.8e-06 Score=77.20 Aligned_cols=142 Identities=17% Similarity=0.086 Sum_probs=96.0
Q ss_pred HHHHHHH-HHhhhhhhHHhhH-HHHHH--hhCCCHHHHHHHHHHHHHHhhhhh-hhhhhccccchHHHHHHHHHHHHHHH
Q 021692 20 VAAMWIQ-SCAGIGYLFGSIS-PVIKS--SLNYNQKQIARLGVAKDLGDSVGF-LAGSLCEVLPIWGALLVGALQNFIGY 94 (309)
Q Consensus 20 ~~~~l~~-~~~g~~Y~fsvys-~~l~~--~lg~s~~~~~~i~~~~~vg~~~~~-~~G~L~Dr~Gpr~vllig~~l~~~gy 94 (309)
..+++.+ +..|.--..+.+. .++++ .+|++.++.+...+....+..+|- ..+++.||+|+|+++.++..+..++.
T Consensus 143 ~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~ 222 (310)
T TIGR01272 143 VLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLS 222 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 3344444 3344433333333 33553 379999998887666666666654 89999999999999998888887776
Q ss_pred HHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 95 GWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 95 ~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
.+.+. .. +.+... ...+.|.+.+..+........+.+|++.+.+.+++.. ..+|+++.+++...+.+
T Consensus 223 ~l~~~--~~-----~~~~~~-~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~~~-~~~Gg~i~P~l~G~lad 289 (310)
T TIGR01272 223 IGAAL--TH-----GYVAMW-FVLALGLFNSIMFPTIFSLALNALGRHTSQGSGILCL-AIVGGAIVPLLQGSLAD 289 (310)
T ss_pred HHHHH--cC-----CHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHH-HHhcchHHHHHHHHHHH
Confidence 55433 11 122222 2234567788888888888889999888888888754 44899998887776554
No 164
>TIGR00898 2A0119 cation transport protein.
Probab=98.48 E-value=3.8e-06 Score=83.12 Aligned_cols=95 Identities=15% Similarity=0.086 Sum_probs=67.3
Q ss_pred hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCc
Q 021692 67 GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGP 145 (309)
Q Consensus 67 ~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~ 145 (309)
.++.|++.||+|+|+++.++.++.+++.+++... .. ...+.......+++.+.+..+........+.|| +.|+.
T Consensus 372 ~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 446 (505)
T TIGR00898 372 KLITLLLIDRLGRRYTMAASLLLAGVALLLLLFV--PV---DLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNL 446 (505)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHc--CC---CchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhh
Confidence 4478999999999999999988877776655432 21 122333333444444555555566667789999 66999
Q ss_pred chhhhhhhhhhhHHHHHHHHH
Q 021692 146 VVGILKGFAGLGGAILTQVYT 166 (309)
Q Consensus 146 avGi~~~~~GLg~ai~~~i~~ 166 (309)
++|+..+...+|+++.+.+..
T Consensus 447 ~~g~~~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 447 GVGVCSTMARVGSIISPFLVY 467 (505)
T ss_pred hHhHHHHHHHHHHHHHhHHHH
Confidence 999998888898888777655
No 165
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.48 E-value=5.7e-06 Score=81.21 Aligned_cols=136 Identities=17% Similarity=0.092 Sum_probs=79.7
Q ss_pred hhhhHHhhHHHH-HHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHH--------HHHHHHHHHHHHHHHHHH
Q 021692 31 IGYLFGSISPVI-KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGA--------LLVGALQNFIGYGWVWLI 100 (309)
Q Consensus 31 ~~Y~fsvys~~l-~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~v--------llig~~l~~~gy~l~~l~ 100 (309)
..|.+..|.|.+ ++.+|++..+.+.......++..+ ++++|++.||++.|+. +..+..+...+..++...
T Consensus 276 ~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (465)
T TIGR00894 276 LYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALP 355 (465)
T ss_pred HHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556676654 778999999988887766666666 5689999999865421 111111111121122221
Q ss_pred HhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 101 VTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 101 ~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
... . +.+.......+.+.+.+...........+..|+.+|.+.|+......+|+.+.+.+...+.+
T Consensus 356 ~~~---~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~ 421 (465)
T TIGR00894 356 YLS---A-AFYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILS 421 (465)
T ss_pred HcC---C-chHHHHHHHHHHHHHhhhhhhhhhhchhhcChhHHHHHHHHHHHHHHHHHHHHHHhhheeeC
Confidence 111 1 23333333334333333333334444557788999999999888888888888877665544
No 166
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.48 E-value=2.1e-06 Score=83.05 Aligned_cols=117 Identities=16% Similarity=0.198 Sum_probs=76.1
Q ss_pred hhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhc
Q 021692 45 SLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNG 123 (309)
Q Consensus 45 ~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g 123 (309)
.+| +..+.+.+.....++..+ .++.|++.||+|+|+++.++.++..+++..+++. . .+.+.+.+...+.+.+
T Consensus 252 ~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~g~~ 324 (437)
T TIGR00792 252 VLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFA--G----SNLPLILVLIILAGFG 324 (437)
T ss_pred ecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc--c----hhHHHHHHHHHHHHHH
Confidence 345 344455554544555555 5589999999999999999998888887766542 1 1345555555666666
Q ss_pred hhhhhhhHHHHHhhhcC--------CCCCcchhhhhhhhhhhHHHHHHHHHHH
Q 021692 124 ETYFNTAALVSCVQNFP--------KSRGPVVGILKGFAGLGGAILTQVYTMI 168 (309)
Q Consensus 124 ~~~~~~~~~~~~~~~FP--------~~RG~avGi~~~~~GLg~ai~~~i~~~~ 168 (309)
.+..+........+..| +++|.+.|+......+|+++.+.+...+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~l 377 (437)
T TIGR00792 325 QNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLI 377 (437)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666555555555432 4578888887776667766665554443
No 167
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.47 E-value=6.3e-06 Score=80.51 Aligned_cols=130 Identities=15% Similarity=0.067 Sum_probs=68.7
Q ss_pred hhhHHhhHHHH-HHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHH---HHHHHHHHHHhCCCC
Q 021692 32 GYLFGSISPVI-KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNF---IGYGWVWLIVTGRAP 106 (309)
Q Consensus 32 ~Y~fsvys~~l-~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~---~gy~l~~l~~~~~i~ 106 (309)
.|.+..|.|.+ ++.+|+|..+.+.......++..+ .++.|++.||+|+++....+..... ++..+++. ...
T Consensus 267 ~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~- 342 (438)
T TIGR00712 267 RYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWM---NPA- 342 (438)
T ss_pred HHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHh---cCC-
Confidence 45555566554 666899998888776655555555 5689999999975432233332222 22222211 111
Q ss_pred ChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHH-HHHHHH
Q 021692 107 VLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAI-LTQVYT 166 (309)
Q Consensus 107 ~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai-~~~i~~ 166 (309)
.+.+.........|.+.............+.+| ++||++.|+......+|+.. .+.+..
T Consensus 343 -~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G 403 (438)
T TIGR00712 343 -GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVG 403 (438)
T ss_pred -CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHH
Confidence 123333222222222211111111234568899 67999999986665466544 344433
No 168
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.45 E-value=9.1e-09 Score=100.15 Aligned_cols=146 Identities=18% Similarity=0.195 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHhhhh-hhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhh
Q 021692 52 QIARLGVAKDLGDSVG-FLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTA 130 (309)
Q Consensus 52 ~~~~i~~~~~vg~~~~-~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~ 130 (309)
+.+...+...+|..+| +++|.+.||+|||+++.++.++..+|..+...+... .+++.+++...+.|.|.|...+.
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~~~~R~~~G~~~g~~~~~ 122 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSY----NNFWMLLIGRFLIGFGIGGAYVV 122 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccc----ccccccccccccccccccccccc
Confidence 3456667777888884 589999999999999999999998887765442111 15788888888888888888888
Q ss_pred HHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHc--cC-ChHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 021692 131 ALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH--AP-DHANLIFMVAVGPAMVVIALMFIIRPVGGH 201 (309)
Q Consensus 131 ~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~--~~-~~~~~~l~la~~~~~v~l~~~~~ir~~p~~ 201 (309)
....+.|.-| ++||...++...+..+|..+...+..... .+ +.+...+..+.++.++.++...++.|.|++
T Consensus 123 ~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~w 197 (451)
T PF00083_consen 123 SPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRW 197 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccce
Confidence 8888889998 67999999988888777655443322221 11 223333344555554555556677776654
No 169
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.45 E-value=9.3e-06 Score=88.51 Aligned_cols=130 Identities=14% Similarity=0.016 Sum_probs=91.7
Q ss_pred HHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhC-------------CC
Q 021692 40 PVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTG-------------RA 105 (309)
Q Consensus 40 ~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~-------------~i 105 (309)
..+++.+|.+..+.+.+..+..++..+ +++.|++.||.++++.+.++.++..++...+.+.... ..
T Consensus 250 ~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 329 (1140)
T PRK06814 250 LLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFL 329 (1140)
T ss_pred HHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhh
Confidence 335778999999999888777788777 5589999999888777666665555443322221000 00
Q ss_pred CChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 106 PVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 106 ~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
...+.|.+++..++.|.+.++.+.+......+.+| ++||.+.|+......++.++.+.+...+.
T Consensus 330 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~ 394 (1140)
T PRK06814 330 SKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQ 394 (1140)
T ss_pred cccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 01246666666677788888888888888889999 67999999988888777777776655544
No 170
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.44 E-value=2.3e-05 Score=78.17 Aligned_cols=187 Identities=12% Similarity=0.133 Sum_probs=110.0
Q ss_pred hhhhhhccchHHHHHHHHHHHHHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchH--HH
Q 021692 6 ERFVSFFNNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIW--GA 82 (309)
Q Consensus 6 ~~~k~~~~~rw~~l~~~~l~~~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr--~v 82 (309)
+-+|+..+.|-.......+.....|..-.++......++++|+++.|+..+.....+.... +.+.|++.||+|+| ++
T Consensus 272 ~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~ 351 (477)
T PF11700_consen 272 RTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRT 351 (477)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHH
Confidence 3345544444443332223333344443344444446889999999998887777777777 55899999999999 77
Q ss_pred HHHHHHHHH--HHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHH
Q 021692 83 LLVGALQNF--IGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGA 159 (309)
Q Consensus 83 llig~~l~~--~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~a 159 (309)
+.++.+... ..+.++.+. ...+...+-|.++++..+.|...|..++.+=+...+.-| .+.+.-.|+-.... =+++
T Consensus 352 l~~~l~~~~~i~~~g~~G~~-~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~g-k~ss 429 (477)
T PF11700_consen 352 LLISLILWIIIPLYGLFGFW-PSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITG-KASS 429 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhh-hcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHH-HHHH
Confidence 777766553 112111111 111111257888888888888889998888899999999 56777777754333 3444
Q ss_pred HHHHHHHHHc----cCChHHHHHHHHHHHHHHHHHHHhhcc
Q 021692 160 ILTQVYTMIH----APDHANLIFMVAVGPAMVVIALMFIIR 196 (309)
Q Consensus 160 i~~~i~~~~~----~~~~~~~~l~la~~~~~v~l~~~~~ir 196 (309)
+.+|+..+.+ ++.+..+. ++.++ .+++++....++
T Consensus 430 ~lGPll~g~i~~~tg~~r~g~~-~l~~l-f~~gl~ll~~v~ 468 (477)
T PF11700_consen 430 WLGPLLFGLITDATGSQRYGFL-FLLVL-FLIGLILLFFVD 468 (477)
T ss_pred HHHHHHHHHHHHHhCCchhHHH-HHHHH-HHHHHHHHhhcc
Confidence 4444433333 22344433 33332 234455444444
No 171
>PRK09848 glucuronide transporter; Provisional
Probab=98.44 E-value=2.2e-06 Score=83.90 Aligned_cols=121 Identities=16% Similarity=0.122 Sum_probs=80.6
Q ss_pred HHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHH
Q 021692 42 IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVG 120 (309)
Q Consensus 42 l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~ 120 (309)
++..+|.+............++..+ .++.|++.||+|+|+++.+|.++..+++.++++ .. ..++|.+.....+.
T Consensus 255 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~--~~---~~~~~~~~~~~~l~ 329 (448)
T PRK09848 255 VRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFW--VS---VWSLPVALVALAIA 329 (448)
T ss_pred EeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH--cC---chhHHHHHHHHHHH
Confidence 3666787765544433333344444 568999999999999999999888888877653 22 12566665556667
Q ss_pred HhchhhhhhhHHHHHhhhcC--------CCCCcchhhhhhhhhhhHHHHHHHHHH
Q 021692 121 NNGETYFNTAALVSCVQNFP--------KSRGPVVGILKGFAGLGGAILTQVYTM 167 (309)
Q Consensus 121 g~g~~~~~~~~~~~~~~~FP--------~~RG~avGi~~~~~GLg~ai~~~i~~~ 167 (309)
+.|.+..++.......+.-| |++|...|+......+|.++.+.+...
T Consensus 330 g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~ 384 (448)
T PRK09848 330 SIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAF 384 (448)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77877777666666666655 235888888766666776666555433
No 172
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.44 E-value=1.6e-06 Score=81.45 Aligned_cols=123 Identities=20% Similarity=0.133 Sum_probs=76.9
Q ss_pred hhhHHhhHH-HHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChh
Q 021692 32 GYLFGSISP-VIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (309)
Q Consensus 32 ~Y~fsvys~-~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s 109 (309)
.+.+..+.+ .+++.+|+++.+.+.+.....+...+ .++.|++.||+|+|+....+..+...+..++....... .+
T Consensus 241 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 317 (366)
T TIGR00886 241 FLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSP---LS 317 (366)
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCc---ch
Confidence 334444443 45778999999988766655555555 55899999999999988888777766655554322210 03
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhh
Q 021692 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLG 157 (309)
Q Consensus 110 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg 157 (309)
.+.......+.+.+.+..+........+.+|++||.+.|+..+...+|
T Consensus 318 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 318 LAVFIVLFVALFFFSGAGNGSTFALVPHIFRRATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHHHHHHhccccchhhhcchhhchhhcccHHHHHHHhccCC
Confidence 333322222233333444444555566788999999999966655443
No 173
>PRK10054 putative transporter; Provisional
Probab=98.42 E-value=1.6e-05 Score=76.84 Aligned_cols=150 Identities=15% Similarity=0.087 Sum_probs=85.4
Q ss_pred hhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhc
Q 021692 45 SLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNG 123 (309)
Q Consensus 45 ~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g 123 (309)
+.+.++...+.+.....+.... ..+.|.+.||.++|+++.++.++..+++..+... . .++|.+.+...+.+.|
T Consensus 238 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~g 311 (395)
T PRK10054 238 DSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFS--G----NSLLLWGMSAAVFTVG 311 (395)
T ss_pred ccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHc--c----hHHHHHHHHHHHHHHH
Confidence 3455565555544433333322 4578999999999999999988888887665431 1 1455444445556666
Q ss_pred hhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 021692 124 ETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAMVVIALMFIIRPVGGH 201 (309)
Q Consensus 124 ~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~~v~l~~~~~ir~~p~~ 201 (309)
.+...+.......+.-| +.||...|... ...+|.++.+.+...+++. .+...++.+++...+.-++...-+|+||..
T Consensus 312 ~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (395)
T PRK10054 312 EIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLMLKGMRARPWG 390 (395)
T ss_pred HHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHHhccccCccc
Confidence 55544444444556667 56999888644 3336777776666555543 333333333333322223333444555544
No 174
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.41 E-value=9e-06 Score=78.65 Aligned_cols=124 Identities=15% Similarity=0.068 Sum_probs=77.5
Q ss_pred hHHHH-HHhhCCCHHHHHHHHHHHHHHhh-hhh-hhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHH
Q 021692 38 ISPVI-KSSLNYNQKQIARLGVAKDLGDS-VGF-LAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMC 114 (309)
Q Consensus 38 ys~~l-~~~lg~s~~~~~~i~~~~~vg~~-~~~-~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~ 114 (309)
+.|.+ ++..+ +..+.+.+.....++.. ... ..++..||++.++.+..+.++..+++.++.. .+ +++.+.
T Consensus 230 ~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~--~~-----~~~~~~ 301 (400)
T PRK11646 230 MLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGM--VS-----NLQQLF 301 (400)
T ss_pred hhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH--hh-----hHHHHH
Confidence 44554 44444 66666666544444333 333 4444556688787777777777777655432 22 344444
Q ss_pred HHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 115 ILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 115 ~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
....+.+.|.+..++.......+..| ++||++.|+.....++|+++.+.+...+.
T Consensus 302 ~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~ 357 (400)
T PRK11646 302 TLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLF 357 (400)
T ss_pred HHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHH
Confidence 44445555666666566666778898 67999999988888888887776655554
No 175
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.39 E-value=4.7e-05 Score=73.20 Aligned_cols=173 Identities=8% Similarity=-0.064 Sum_probs=89.1
Q ss_pred hhhhccchHHHHHHHHHHHHHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhhhhhhhhhccccch---HHHHH
Q 021692 8 FVSFFNNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSVGFLAGSLCEVLPI---WGALL 84 (309)
Q Consensus 8 ~k~~~~~rw~~l~~~~l~~~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~~~~~G~L~Dr~Gp---r~vll 84 (309)
.++..++|........ ..+.....|.+..+.|.+-++.|++.. .+.......+...+ -.|++.||..+ |+...
T Consensus 185 ~~~ll~~~~~~~~~~~-~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~--g~~~~~d~~~r~~~r~~~~ 260 (368)
T TIGR00903 185 FGALAGRKDLWIIGAI-LGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLI--GVAVIPDRVARAGLRSIYI 260 (368)
T ss_pred HHHHHcChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHH--HHHHhhHHhhhhhhHHHHH
Confidence 4445555544332222 123344566777788777666788865 33333322232223 24777777754 33323
Q ss_pred H-HHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHH
Q 021692 85 V-GALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILT 162 (309)
Q Consensus 85 i-g~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~ 162 (309)
. ..++..++...+ ...+ +.+......++.+.+....+........+.+| +.||++.|+..+...+++...+
T Consensus 261 ~~~~~~~a~~~~~~--~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~ 333 (368)
T TIGR00903 261 RAAALLIAAFFLAL--AFEL-----NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALA 333 (368)
T ss_pred HHHHHHHHHHHHHH--HHcc-----ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHH
Confidence 2 333333332222 2222 12222223344444444444445556779999 5799999999887778888887
Q ss_pred HHHHHHccCChHHHHHHHHHHHHHHHHHHHh
Q 021692 163 QVYTMIHAPDHANLIFMVAVGPAMVVIALMF 193 (309)
Q Consensus 163 ~i~~~~~~~~~~~~~l~la~~~~~v~l~~~~ 193 (309)
.+....+. +....+.+.++ +.+++.+...
T Consensus 334 ~~~~~~~~-~~~~~f~~~~~-~~~i~~~~~~ 362 (368)
T TIGR00903 334 LAAMLFIS-SAEAYFTFLAI-LITIAFAIAL 362 (368)
T ss_pred HHHHHHhc-CHHHHHHHHHH-HHHHHHHHHH
Confidence 77665554 43333333343 3333444433
No 176
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.39 E-value=1.4e-06 Score=80.69 Aligned_cols=126 Identities=20% Similarity=0.216 Sum_probs=88.8
Q ss_pred hhHHhhHHHH-HHhhCCC-HHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChh
Q 021692 33 YLFGSISPVI-KSSLNYN-QKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (309)
Q Consensus 33 Y~fsvys~~l-~~~lg~s-~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s 109 (309)
+.+..+.|.+ ++++|++ ..+.+.+.....++..+ +++.|++.||+|+|+...+......++...+.+.... . +
T Consensus 223 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~ 298 (352)
T PF07690_consen 223 SGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFS---S-S 298 (352)
T ss_dssp HHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHH---C-H
T ss_pred HHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh---h-h
Confidence 3355666665 8899999 77877666655555544 6699999999999887777776666554443322111 1 2
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHH
Q 021692 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILT 162 (309)
Q Consensus 110 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~ 162 (309)
.+.......+.|.+.+..+........+.+| ++||++.|+.....++|+.+.+
T Consensus 299 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 299 PVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 3333334455666788888888888999998 6699999999988888887754
No 177
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.37 E-value=6e-05 Score=74.62 Aligned_cols=121 Identities=12% Similarity=0.057 Sum_probs=78.9
Q ss_pred HHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhcc----ccch-HHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHH
Q 021692 40 PVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCE----VLPI-WGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAM 113 (309)
Q Consensus 40 ~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~D----r~Gp-r~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l 113 (309)
..+.+.+|++..+++.+..+.-+...+ .++.|.++| |+|+ |+-+++|++..++++.+++.. .+.-....++.+
T Consensus 31 ~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~-p~~~~~~~~~~~ 109 (473)
T PRK10429 31 YYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSA-HLFEGTAQYVFV 109 (473)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcC-CCCCccHHHHHH
Confidence 446888999999999987776666666 678999999 5698 556777888877776665432 111001123333
Q ss_pred HHHHHHHHhchhhhhhhHHHHHhhhcC--CCCCcchhhhhhhhhhhHHHH
Q 021692 114 CILIFVGNNGETYFNTAALVSCVQNFP--KSRGPVVGILKGFAGLGGAIL 161 (309)
Q Consensus 114 ~~~~~l~g~g~~~~~~~~~~~~~~~FP--~~RG~avGi~~~~~GLg~ai~ 161 (309)
++.+.+...+.+..+.+......+.-+ ++|....+....+..+|+.+.
T Consensus 110 ~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~ 159 (473)
T PRK10429 110 CVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVT 159 (473)
T ss_pred HHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 444445556677777777777777764 568888877444444554444
No 178
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.36 E-value=2e-05 Score=75.68 Aligned_cols=128 Identities=15% Similarity=0.047 Sum_probs=91.2
Q ss_pred hhhhhhHHhhH-HHHHHhhCCCHHH----HHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHh
Q 021692 29 AGIGYLFGSIS-PVIKSSLNYNQKQ----IARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVT 102 (309)
Q Consensus 29 ~g~~Y~fsvys-~~l~~~lg~s~~~----~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~ 102 (309)
.+..|.|.++. .+++...+-++.+ .+.+++...++..+ ++..|.++||+|||++++++++..++.|.++.++
T Consensus 41 ~~~L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S-- 118 (451)
T KOG2615|consen 41 VSSLYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALS-- 118 (451)
T ss_pred ccchhHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHH--
Confidence 36678887776 5566666655532 34455555556666 6689999999999999999999999987776542
Q ss_pred CCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHH
Q 021692 103 GRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQV 164 (309)
Q Consensus 103 ~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i 164 (309)
.++..+.+...++|+..+-.. .+-..+++.++ ++|+.+++......|+|-.+.+.+
T Consensus 119 -----~~F~afv~aR~l~Gi~kgnl~-v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmI 175 (451)
T KOG2615|consen 119 -----RNFAAFVLARFLGGIFKGNLS-VIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMI 175 (451)
T ss_pred -----HHHHHHHHHHHhhhhccCchH-HHHHHHHhhcChhhccceeeeeehhhhcchhhcchh
Confidence 256344444777877665543 34456779998 679999999999998987666554
No 179
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.33 E-value=2.2e-05 Score=76.32 Aligned_cols=156 Identities=13% Similarity=0.159 Sum_probs=99.2
Q ss_pred hhhhhhccchHHHHHHHHHHHHHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHH
Q 021692 6 ERFVSFFNNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALL 84 (309)
Q Consensus 6 ~~~k~~~~~rw~~l~~~~l~~~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vll 84 (309)
+.+|+.++++=.........-...|.+-.++.=...-++++|+++.++..+.....+...+ ++++|+|.||+|+|+++.
T Consensus 243 ~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~ 322 (438)
T COG2270 243 STFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLM 322 (438)
T ss_pred HHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeh
Confidence 5567776666444433333334445444433222224679999999999998888887777 669999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHH
Q 021692 85 VGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQ 163 (309)
Q Consensus 85 ig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~ 163 (309)
++.+...+..... .+... ...+|.+.+ +.|...|.....+=....|+.| ++-|.-.|+....- =.+++++|
T Consensus 323 ~~lvi~~~~~~~~--~~~~~--~~~f~i~gl---l~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltg-ra~S~~gp 394 (438)
T COG2270 323 IGLVILSIAALYL--IFLEG--ELDFWILGL---LVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTG-RAASFLGP 394 (438)
T ss_pred HHHHHHHHHHHHH--HHccc--cHHHHHHHH---HHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhh-hHHHHHHH
Confidence 9988876443221 12221 124554433 4455566666677778889999 56788888743333 34555555
Q ss_pred HHHHHc
Q 021692 164 VYTMIH 169 (309)
Q Consensus 164 i~~~~~ 169 (309)
..-+.+
T Consensus 395 ~lv~v~ 400 (438)
T COG2270 395 FLVAVI 400 (438)
T ss_pred HHHHHH
Confidence 544444
No 180
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.32 E-value=6e-05 Score=73.29 Aligned_cols=192 Identities=14% Similarity=0.038 Sum_probs=92.2
Q ss_pred hhhccchHHHHHHHHHHHHHhhhhhhHHhhHHHH-HHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhc-cccchHHHHHH
Q 021692 9 VSFFNNRWLVFVAAMWIQSCAGIGYLFGSISPVI-KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLC-EVLPIWGALLV 85 (309)
Q Consensus 9 k~~~~~rw~~l~~~~l~~~~~g~~Y~fsvys~~l-~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~-Dr~Gpr~vlli 85 (309)
++..++|........ ........+.|..+.|.+ ++.+|++..+.+........+..+ +.+.+.+. ||.++|. ...
T Consensus 212 ~~ll~~~~~~~~~l~-~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~-~~~ 289 (413)
T PRK15403 212 RNVFRNRLFLTGAAT-LSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRF-IWR 289 (413)
T ss_pred HHHHcCHHHHHHHHH-HHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhH-HHH
Confidence 444455444332222 223333445665566644 777899999988875544445544 45666655 5555553 322
Q ss_pred HHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC--CCCCcchhhhhhhhhhhHHHHHH
Q 021692 86 GALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP--KSRGPVVGILKGFAGLGGAILTQ 163 (309)
Q Consensus 86 g~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP--~~RG~avGi~~~~~GLg~ai~~~ 163 (309)
+.....+|..++...... .+ .+++...+..++.+.|.+...+..... .+++ ..+|++.|+.......+..+.+.
T Consensus 290 ~~~~~~ig~~l~~~~~~~-~~-~~~~~~~~~~~l~~~G~~~~~p~~~~~--al~~~~~~~G~a~a~~~~~~~~~~~~~~~ 365 (413)
T PRK15403 290 AVPIQLVGLALLIVGNLL-WP-HVWLWSVLGTSLYAFGIGLIFPTLFRF--TLFSNNLPKGTVSASLNMVILMVMAVSVE 365 (413)
T ss_pred HHHHHHHHHHHHHHHHHH-cc-ccHHHHHHHHHHHHHHHHHHhHHHHHH--HhccCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 233333343333221100 01 133333344555566666665444433 3454 34899999876665455444444
Q ss_pred HHHHHccC-ChHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCC
Q 021692 164 VYTMIHAP-DHANLIFMVAVGPAMVVIALMFIIRPVGGHRQVRP 206 (309)
Q Consensus 164 i~~~~~~~-~~~~~~l~la~~~~~v~l~~~~~ir~~p~~~~~~~ 206 (309)
....+.+. ....+.....+..++.........|.+|.|+.++.
T Consensus 366 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (413)
T PRK15403 366 IGRWLWFNGGRLPFHLLAVVAGVIVVFTLAGLLNRVRQHQAAEL 409 (413)
T ss_pred HHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhH
Confidence 43333232 34444433333222222233444455555554433
No 181
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.32 E-value=1.2e-05 Score=80.02 Aligned_cols=131 Identities=11% Similarity=0.112 Sum_probs=83.6
Q ss_pred hhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHH--hCCCCCh
Q 021692 32 GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIV--TGRAPVL 108 (309)
Q Consensus 32 ~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~--~~~i~~~ 108 (309)
.+.-..|+..+-++-|+++.+...++....+.... .+++.++.||+|||++++++..++.+...++.... .+..
T Consensus 286 i~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~--- 362 (485)
T KOG0569|consen 286 INAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSF--- 362 (485)
T ss_pred cceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 33445677778888999999888877766666555 66899999999999999999998885554443321 2211
Q ss_pred hHHHH--HH---HHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHH
Q 021692 109 PLWAM--CI---LIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYT 166 (309)
Q Consensus 109 s~~~l--~~---~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~ 166 (309)
..|.- ++ +......+.|. .....-...|.|| +.|..+.......+-++..+.+..+-
T Consensus 363 ~~~~~y~~i~~~~~~~~~f~~G~-gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp 425 (485)
T KOG0569|consen 363 GSWLSYLCIAAIFLFIISFAIGP-GPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFP 425 (485)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCC-CchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11221 11 11122222221 2234456779999 56999999987777666665544433
No 182
>PRK09848 glucuronide transporter; Provisional
Probab=98.31 E-value=0.00016 Score=70.78 Aligned_cols=112 Identities=12% Similarity=0.012 Sum_probs=66.1
Q ss_pred HHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhcccc----chHH-HHHHHHHHHHHHHHHHHHHHhCCCCChhHHHH
Q 021692 40 PVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVL----PIWG-ALLVGALQNFIGYGWVWLIVTGRAPVLPLWAM 113 (309)
Q Consensus 40 ~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~----Gpr~-vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l 113 (309)
..+++.+|++..+++.+.....+...+ .++.|+++||. |+|+ .++++.+...+...+.+....+.......+..
T Consensus 33 ~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (448)
T PRK09848 33 SYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYA 112 (448)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHH
Confidence 458889999999999998877777766 67999999997 6566 44666665553333322111111111122333
Q ss_pred HHHHHHHHhchhhhhhhHHHHHhhhc--CCCCCcchhhhh
Q 021692 114 CILIFVGNNGETYFNTAALVSCVQNF--PKSRGPVVGILK 151 (309)
Q Consensus 114 ~~~~~l~g~g~~~~~~~~~~~~~~~F--P~~RG~avGi~~ 151 (309)
+....+.+.+.++.+++......+.- |++|....+.-.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~ 152 (448)
T PRK09848 113 YLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARG 152 (448)
T ss_pred HHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHH
Confidence 33344455666666655554333322 356877665543
No 183
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.31 E-value=1.4e-05 Score=74.52 Aligned_cols=131 Identities=18% Similarity=0.101 Sum_probs=74.2
Q ss_pred hHHhhHHH-HHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHH---HHHHHHHHHHHHHhCCCCCh
Q 021692 34 LFGSISPV-IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGAL---QNFIGYGWVWLIVTGRAPVL 108 (309)
Q Consensus 34 ~fsvys~~-l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~---l~~~gy~l~~l~~~~~i~~~ 108 (309)
.+..+.+. +++.+|++..+.+.......++..+ .++.|++.||.+.|+...++.. ....+...++ ... ..
T Consensus 234 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~ 308 (379)
T TIGR00881 234 GILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYW---LNP--AA 308 (379)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHh---cCc--ch
Confidence 33444443 5778999999988877766666666 5589999998643322111111 1112222211 111 11
Q ss_pred hHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 109 PLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 109 s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
+.+...+...+.|...............+.+| ++||.+.|+......+|+.+.+.+...+.
T Consensus 309 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 370 (379)
T TIGR00881 309 NPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLA 370 (379)
T ss_pred hHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHH
Confidence 33333333333333222222233345678998 66999999998888888887776665544
No 184
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.30 E-value=3.6e-05 Score=76.46 Aligned_cols=166 Identities=16% Similarity=0.159 Sum_probs=101.5
Q ss_pred HHhhhhhhHH-hhHHHHHHhhCCCHHHHHHHHHHHHHHhhhhhhhhhhccccc-----hHHHHHHHHHHHH-HHHHHHHH
Q 021692 27 SCAGIGYLFG-SISPVIKSSLNYNQKQIARLGVAKDLGDSVGFLAGSLCEVLP-----IWGALLVGALQNF-IGYGWVWL 99 (309)
Q Consensus 27 ~~~g~~Y~fs-vys~~l~~~lg~s~~~~~~i~~~~~vg~~~~~~~G~L~Dr~G-----pr~vllig~~l~~-~gy~l~~l 99 (309)
++-|..+... ...+.+++++|.|.++++...+...+...+.++.|.+.||+| +|+.++++.++.. +++..+.
T Consensus 36 ~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~- 114 (468)
T TIGR00788 36 FVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLP- 114 (468)
T ss_pred HHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcc-
Confidence 4445443322 334667889999999998887877788888888999999998 7888888887763 4433221
Q ss_pred HHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhh---hhHHHHHHHHHHHccC-ChHH
Q 021692 100 IVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAG---LGGAILTQVYTMIHAP-DHAN 175 (309)
Q Consensus 100 ~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~G---Lg~ai~~~i~~~~~~~-~~~~ 175 (309)
... ...........+.+.+.+..|.++-...++..++++....++.....+ +|..+.+.+...+.+. +++.
T Consensus 115 -~~~----~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~ 189 (468)
T TIGR00788 115 -GKV----SSAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRI 189 (468)
T ss_pred -ccc----chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcch
Confidence 111 122233335566777888889988899999999555444444333332 4555554444333332 3333
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCC
Q 021692 176 LIFMVAVGPAMVVIALMFIIRPVG 199 (309)
Q Consensus 176 ~~l~la~~~~~v~l~~~~~ir~~p 199 (309)
-++..++++++. .+...++++++
T Consensus 190 ~f~~~a~l~ll~-~~~~~~~~E~~ 212 (468)
T TIGR00788 190 LFLITAALLLLQ-LFVSNLSKERR 212 (468)
T ss_pred HHHHHHHHHHHH-HHHHHhccccc
Confidence 333445444433 44456666653
No 185
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.28 E-value=7.2e-05 Score=74.09 Aligned_cols=162 Identities=14% Similarity=0.101 Sum_probs=97.3
Q ss_pred hhhhhHHhhH-HHHHHhhCCCHHHHHHHH-HHHHHHhhhhhhhhhhccc-cchHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 021692 30 GIGYLFGSIS-PVIKSSLNYNQKQIARLG-VAKDLGDSVGFLAGSLCEV-LPIWGALLVGALQNFIGYGWVWLIVTGRAP 106 (309)
Q Consensus 30 g~~Y~fsvys-~~l~~~lg~s~~~~~~i~-~~~~vg~~~~~~~G~L~Dr-~Gpr~vllig~~l~~~gy~l~~l~~~~~i~ 106 (309)
|..-.+-.|. ..+.+.+|+|+++...+. ....+.....+++||++|| .|+|+++..|+++..+|++++...- .
T Consensus 39 GmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~---~- 114 (498)
T COG3104 39 GMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISS---V- 114 (498)
T ss_pred hhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccc---c-
Confidence 4444444553 222223559999987664 4444444446699999999 5999999999999999998876531 0
Q ss_pred ChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCC-C--CCcchhhhhhhhhhhHHHHHHHHHHHccCC-hHHHHHHHHH
Q 021692 107 VLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-S--RGPVVGILKGFAGLGGAILTQVYTMIHAPD-HANLIFMVAV 182 (309)
Q Consensus 107 ~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~-~--RG~avGi~~~~~GLg~ai~~~i~~~~~~~~-~~~~~l~la~ 182 (309)
.+...+++...+.++|.|.+=+...+...+.+|+ + |-.+.++.-....+|+. ++|+...++.++ ....-+-++.
T Consensus 115 -~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl-~~p~i~~~~~~~~g~~~gF~~aa 192 (498)
T COG3104 115 -SGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSL-IAPIITGLLAINYGWHVGFGLAA 192 (498)
T ss_pred -ccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHH-HHHHHHHHHHHhhCHHHHHHHHH
Confidence 1233444455555678888866666667799983 2 55556665444447754 444444444321 1112223344
Q ss_pred HHHHHHHHHHhhccc
Q 021692 183 GPAMVVIALMFIIRP 197 (309)
Q Consensus 183 ~~~~v~l~~~~~ir~ 197 (309)
+....+++..++.|.
T Consensus 193 vGm~~gl~~f~~~~r 207 (498)
T COG3104 193 VGMIIGLVIFLLGRR 207 (498)
T ss_pred HHHHHHHHHHHHccc
Confidence 444455555555553
No 186
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.27 E-value=9.9e-06 Score=79.42 Aligned_cols=153 Identities=18% Similarity=0.195 Sum_probs=105.1
Q ss_pred CCHHHHHHHHHHHHHHhhhhh-hhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhh
Q 021692 48 YNQKQIARLGVAKDLGDSVGF-LAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETY 126 (309)
Q Consensus 48 ~s~~~~~~i~~~~~vg~~~~~-~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~ 126 (309)
++..-.+.+..+..+|..+|- +.|++.||+|||++.....+.+.++-.+..+......+..-.+.++.+..+.|+|.|.
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGG 160 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGG 160 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccC
Confidence 555556777788889998854 8999999999999998888887766655444333222212367788888999999887
Q ss_pred hhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhH---HHHHHHHHHHccC-----------C-hHHHHHHHHHHHHHHHHH
Q 021692 127 FNTAALVSCVQNFP-KSRGPVVGILKGFAGLGG---AILTQVYTMIHAP-----------D-HANLIFMVAVGPAMVVIA 190 (309)
Q Consensus 127 ~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~---ai~~~i~~~~~~~-----------~-~~~~~l~la~~~~~v~l~ 190 (309)
=|..+.+..+|.=- ++||.-.++.-+.+|+|. .+.+.+....+++ + .++-.+.+|++|+++.+.
T Consensus 161 DYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly 240 (538)
T KOG0252|consen 161 DYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLY 240 (538)
T ss_pred CCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 77555544444444 569999999888887654 3445555555521 1 355677788888877766
Q ss_pred HHhhcccCCC
Q 021692 191 LMFIIRPVGG 200 (309)
Q Consensus 191 ~~~~ir~~p~ 200 (309)
-.+.+++++.
T Consensus 241 ~Rl~M~Et~~ 250 (538)
T KOG0252|consen 241 FRLKMPETAR 250 (538)
T ss_pred hhhcCCcchh
Confidence 6666666543
No 187
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.23 E-value=1.9e-05 Score=77.14 Aligned_cols=144 Identities=10% Similarity=0.055 Sum_probs=98.6
Q ss_pred CHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhh
Q 021692 49 NQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYF 127 (309)
Q Consensus 49 s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~ 127 (309)
++.-.+.+.+...+.... ..++.++.+|+|+|+.++++++.+.+=+.+.+++ ++.|.+...-.+-+.-.+..
T Consensus 257 g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~-------~~~~~i~~~klLH~~e~~l~ 329 (412)
T PF01306_consen 257 GNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFA-------TNPWVISLIKLLHALEFPLL 329 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT---------SHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhh-------cchHHHHHHHHHHHHHHHHH
Confidence 334455566666666655 4489999999999999999999888776655431 35777777777777777788
Q ss_pred hhhHHHHHhhhcCCC-CCcchhhh-hhhhhhhHHHHHHHHHHHccC-C-hHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 021692 128 NTAALVSCVQNFPKS-RGPVVGIL-KGFAGLGGAILTQVYTMIHAP-D-HANLIFMVAVGPAMVVIALMFIIRPVGG 200 (309)
Q Consensus 128 ~~~~~~~~~~~FP~~-RG~avGi~-~~~~GLg~ai~~~i~~~~~~~-~-~~~~~l~la~~~~~v~l~~~~~ir~~p~ 200 (309)
..+....+.++||++ ..+.-.+. ....|+|.++++++....+++ + ...|+ .++.+.....+++.+.+|..++
T Consensus 330 lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tyl-img~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 330 LVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYL-IMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHS--SSS
T ss_pred HHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHH-HHHHHHHHHHHHheeeecCCCc
Confidence 889999999999955 45555552 456678889998888877765 2 33454 4565566667777778775544
No 188
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.23 E-value=3e-05 Score=73.11 Aligned_cols=132 Identities=17% Similarity=0.133 Sum_probs=83.2
Q ss_pred hhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccc-hHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 021692 30 GIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLP-IWGALLVGALQNFIGYGWVWLIVTGRAPV 107 (309)
Q Consensus 30 g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~G-pr~vllig~~l~~~gy~l~~l~~~~~i~~ 107 (309)
...+.+..|.|.+-+++|+|..+.+.+.+...++..+ .++.|++.||++ +|+++.++.++..++...+.+...
T Consensus 211 ~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 285 (355)
T TIGR00896 211 GLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPM----- 285 (355)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhh-----
Confidence 3345555566666556899999988887777777766 568999999994 566777777777777655543211
Q ss_pred hhHHHHHHHHHHHHhchhhhhhhHHHHHhhhc-C-CCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 108 LPLWAMCILIFVGNNGETYFNTAALVSCVQNF-P-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 108 ~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~F-P-~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
.+.+. ...+.|.+.+..++.........+ + +++|.+.|+..+...+++++.+.+...+.
T Consensus 286 ~~~~~---~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~ 346 (355)
T TIGR00896 286 HGLWA---WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLH 346 (355)
T ss_pred hHHHH---HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12222 233456666665555444444344 4 45788888877666566666665554443
No 189
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.17 E-value=5.3e-05 Score=73.78 Aligned_cols=151 Identities=19% Similarity=0.247 Sum_probs=91.7
Q ss_pred hhhhhhccchHH-HHHHHHHHH-HHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHH
Q 021692 6 ERFVSFFNNRWL-VFVAAMWIQ-SCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGA 82 (309)
Q Consensus 6 ~~~k~~~~~rw~-~l~~~~l~~-~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~v 82 (309)
+..|+..++|-. .+.+...+. ........+..| ..+..+|.+ ...+.+.....++..+ .++.+++.||+|+|++
T Consensus 216 ~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y--~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~ 292 (428)
T PF13347_consen 216 DSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPY--YFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKV 292 (428)
T ss_pred cchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHH--HHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceee
Confidence 445566655544 344444433 332222222222 234455655 3444545555555555 5689999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC--------CCCCcchhhh----
Q 021692 83 LLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP--------KSRGPVVGIL---- 150 (309)
Q Consensus 83 llig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP--------~~RG~avGi~---- 150 (309)
..++.++..+++.++++...+ +.|.+.+...+.|.+.+..+........+..+ ++.|...|+.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~ 367 (428)
T PF13347_consen 293 YIIGLLLAALGFLLLFFLGPG-----SPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFI 367 (428)
T ss_pred hhhhHHHHHHHHHHHHHHHhh-----hHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhh
Confidence 999999999988887765322 57788888888888888777666666666665 2235555553
Q ss_pred hhhhhhhHHHHHHH
Q 021692 151 KGFAGLGGAILTQV 164 (309)
Q Consensus 151 ~~~~GLg~ai~~~i 164 (309)
|...++++++.+.+
T Consensus 368 k~~~~la~~i~g~~ 381 (428)
T PF13347_consen 368 KIGQGLAGAIVGLL 381 (428)
T ss_pred HHHHHHHHHHHHHH
Confidence 44444444444443
No 190
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.11 E-value=6.2e-05 Score=73.24 Aligned_cols=151 Identities=20% Similarity=0.224 Sum_probs=93.3
Q ss_pred hhhhhhhhhccchHHHHHHHHHHHHHhhhhhhHHhhHH-HHHHhhCCCHHHHHHHHHHHHHHhhhh-hhhhhhcccc--c
Q 021692 3 KFQERFVSFFNNRWLVFVAAMWIQSCAGIGYLFGSISP-VIKSSLNYNQKQIARLGVAKDLGDSVG-FLAGSLCEVL--P 78 (309)
Q Consensus 3 ~~~~~~k~~~~~rw~~l~~~~l~~~~~g~~Y~fsvys~-~l~~~lg~s~~~~~~i~~~~~vg~~~~-~~~G~L~Dr~--G 78 (309)
.++...+-.++|++..+++-.-+. .--.-|...-++| ++.+..|+|..+.+...+..-++...| +++|+++||+ |
T Consensus 240 ~~~i~~~YVL~Nk~iW~la~a~vf-vYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkg 318 (448)
T COG2271 240 AWQIFVKYVLKNKLIWLLALANVF-VYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKG 318 (448)
T ss_pred HHHHHHHHHHcChHHHHHHHHHHH-HHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccc
Confidence 345566777888876655432222 1122444445554 368889999999999888777888775 4899999996 5
Q ss_pred hHHH-HHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHH---HHHhhhcCCC-CCcchhhhhhh
Q 021692 79 IWGA-LLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAAL---VSCVQNFPKS-RGPVVGILKGF 153 (309)
Q Consensus 79 pr~v-llig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~---~~~~~~FP~~-RG~avGi~~~~ 153 (309)
+|.. .++.+++.+++...+|+..++ +++.......+.|. +.+.+.+ ..+.+--|++ -|++.|+.-.+
T Consensus 319 rR~p~~~i~~~~i~~~~~~~w~~~~~-----~~~l~~~~l~~iGf---~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf 390 (448)
T COG2271 319 RRGPMALIFMLLITASLVLYWLAPNG-----SYLLDAILLFIIGF---LIYGPQMLIGLAAAEFVPKKAAGTATGFVGLF 390 (448)
T ss_pred ccchHHHHHHHHHHHHHHHHHcCCCc-----cHHHHHHHHHHHHH---HHhhHHHHHHHHHhccccHhhccchhchhhhH
Confidence 6654 444555555777677664332 45555444444443 2333332 3455777855 89999997766
Q ss_pred hhhhHHHHH
Q 021692 154 AGLGGAILT 162 (309)
Q Consensus 154 ~GLg~ai~~ 162 (309)
.-++++.++
T Consensus 391 ~Yl~Ga~~a 399 (448)
T COG2271 391 AYLIGAALA 399 (448)
T ss_pred HHHhhHHhc
Confidence 667444443
No 191
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.11 E-value=0.00082 Score=64.30 Aligned_cols=167 Identities=10% Similarity=-0.024 Sum_probs=89.7
Q ss_pred HHhhhhhhH-HhhHHHHHHhhCCCHHHHHHHHH--HHHHHhh-hhhhh-hhhccccchHHHHHHHHHHHHH-HHHHHHHH
Q 021692 27 SCAGIGYLF-GSISPVIKSSLNYNQKQIARLGV--AKDLGDS-VGFLA-GSLCEVLPIWGALLVGALQNFI-GYGWVWLI 100 (309)
Q Consensus 27 ~~~g~~Y~f-svys~~l~~~lg~s~~~~~~i~~--~~~vg~~-~~~~~-G~L~Dr~Gpr~vllig~~l~~~-gy~l~~l~ 100 (309)
...|..|.+ .-+.|.+.++.|+|.++++..+. ..-+... .+++. ++..||+|+|+..+++..+... ....+ .
T Consensus 11 ~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~--~ 88 (390)
T TIGR02718 11 LSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASL--A 88 (390)
T ss_pred HHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHH--H
Confidence 444554333 34556677778999999998742 2233343 36655 6689999999987666533221 11111 1
Q ss_pred HhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHH
Q 021692 101 VTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIF 178 (309)
Q Consensus 101 ~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l 178 (309)
.......+..|.+.. ..+.+...+..+...-....++.+ ++|+...++...+..+|..+.+.....+.+. +++.-++
T Consensus 89 ~~~~~~~~~~~~~~~-~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~ 167 (390)
T TIGR02718 89 LVGPDVAGAGWAVGL-LACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFL 167 (390)
T ss_pred cCCcchhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 111111112343332 223334455555555556778888 4568888777777667777776544444332 3443334
Q ss_pred HHHHHHHHHHHHHHhhccc
Q 021692 179 MVAVGPAMVVIALMFIIRP 197 (309)
Q Consensus 179 ~la~~~~~v~l~~~~~ir~ 197 (309)
+.+++.++..+. .+++++
T Consensus 168 ~~a~l~~~~~~~-~~~~~~ 185 (390)
T TIGR02718 168 LVACVPLASLVC-VLWLKD 185 (390)
T ss_pred HHHHHHHHHHHH-HHHcCC
Confidence 445444433333 334433
No 192
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.07 E-value=6.7e-05 Score=72.89 Aligned_cols=135 Identities=12% Similarity=0.071 Sum_probs=78.7
Q ss_pred hhhhhhHHhhHHHHHHhh--CCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHH-HHHHHHHHHHHHHHHHHHHhCC
Q 021692 29 AGIGYLFGSISPVIKSSL--NYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGA-LLVGALQNFIGYGWVWLIVTGR 104 (309)
Q Consensus 29 ~g~~Y~fsvys~~l~~~l--g~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~v-llig~~l~~~gy~l~~l~~~~~ 104 (309)
.+..|.+..|.|.+-+++ |.+..+.+.......++..+ .+..|++.||+++|+. ..++.++..+++.+. . ..+
T Consensus 255 ~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~-~-~~~- 331 (412)
T TIGR02332 255 TNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLA-S-ATD- 331 (412)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHH-H-hcC-
Confidence 344666677777775554 66777777776666676666 4589999999997774 444443444443221 1 111
Q ss_pred CCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 105 APVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 105 i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
. +...+ ...++.+.|.............+.+| ++||.+.|+......+|+++.+.+...+.+
T Consensus 332 --~-~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~ 394 (412)
T TIGR02332 332 --H-NLIQL-LGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKD 394 (412)
T ss_pred --C-HHHHH-HHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccc
Confidence 1 22111 11112222221111112233346788 679999999998888998888877655544
No 193
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.05 E-value=8.6e-05 Score=74.70 Aligned_cols=155 Identities=14% Similarity=0.068 Sum_probs=109.6
Q ss_pred HHHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhhhh-hhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCC
Q 021692 26 QSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSVGF-LAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGR 104 (309)
Q Consensus 26 ~~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~~~-~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~ 104 (309)
.+.....+...+|.+.+.+..++++.+.+.+.+...+...++- ..|++.|+...++..+....+...|...++.....
T Consensus 308 ~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~- 386 (509)
T KOG2504|consen 308 LFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFAT- 386 (509)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhc-
Confidence 3334445666778888888999999999998887777777754 89999999995444333333333333334443333
Q ss_pred CCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHcc--CChHHHHHHHH
Q 021692 105 APVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA--PDHANLIFMVA 181 (309)
Q Consensus 105 i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~--~~~~~~~l~la 181 (309)
+++.++.+..+.|...+.+..-...++.+..+ ++=..+.|+...+.|+++.+.+|+...+.+ ++....+.+.+
T Consensus 387 ----~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g 462 (509)
T KOG2504|consen 387 ----TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCG 462 (509)
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcC
Confidence 57888888888887777765555567889998 778999999999999999999999885553 34544555556
Q ss_pred HHHH
Q 021692 182 VGPA 185 (309)
Q Consensus 182 ~~~~ 185 (309)
+..+
T Consensus 463 ~~~~ 466 (509)
T KOG2504|consen 463 LCFL 466 (509)
T ss_pred hHHH
Confidence 5443
No 194
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.90 E-value=0.0002 Score=71.56 Aligned_cols=102 Identities=13% Similarity=0.126 Sum_probs=76.2
Q ss_pred hhhhhhhhhccccchHH-------HHHHHHHHHHHHHHHHHH---HHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHH
Q 021692 65 SVGFLAGSLCEVLPIWG-------ALLVGALQNFIGYGWVWL---IVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVS 134 (309)
Q Consensus 65 ~~~~~~G~L~Dr~Gpr~-------vllig~~l~~~gy~l~~l---~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~ 134 (309)
.++++.|+++||+|+|+ -+.+|.++..+|+..... ...+.-...++|.+...+.+.+.|..+..++....
T Consensus 324 i~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~ 403 (489)
T PRK10207 324 VASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAM 403 (489)
T ss_pred HHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 44778899999999997 377788887777654321 11111011356666677778889999999999999
Q ss_pred HhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHH
Q 021692 135 CVQNFP-KSRGPVVGILKGFAGLGGAILTQVYT 166 (309)
Q Consensus 135 ~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~ 166 (309)
..+.-| +.+|.++|+.....++|+++...+.+
T Consensus 404 ~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~ 436 (489)
T PRK10207 404 IAALVPQHLMGFILGMWFLTQAAAFLLGGYVAT 436 (489)
T ss_pred HHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999 56999999988888899988877654
No 195
>PRK11462 putative transporter; Provisional
Probab=97.90 E-value=0.0024 Score=63.27 Aligned_cols=120 Identities=13% Similarity=-0.059 Sum_probs=78.8
Q ss_pred HHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccc----cchHHH-HHHHHHHHHHHHHHHHHHHhCCCCChhHHHHH
Q 021692 41 VIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEV----LPIWGA-LLVGALQNFIGYGWVWLIVTGRAPVLPLWAMC 114 (309)
Q Consensus 41 ~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr----~Gpr~v-llig~~l~~~gy~l~~l~~~~~i~~~s~~~l~ 114 (309)
.+.+.+|++...++++..+.-+..++ -++.|.++|| +|+||. +++|++...+++.+.+... +.-.....+.+.
T Consensus 35 fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p-~~s~~~~~~y~~ 113 (460)
T PRK11462 35 FYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTP-DLSMNGKMIYAA 113 (460)
T ss_pred HHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCC-CCCcchHHHHHH
Confidence 35788999999999988777666666 6789999996 688665 6667777777766655321 110011122233
Q ss_pred HHHHHHHhchhhhhhhHHHHHhhhcC--CCCCcchhhhhhhhhhhHHHH
Q 021692 115 ILIFVGNNGETYFNTAALVSCVQNFP--KSRGPVVGILKGFAGLGGAIL 161 (309)
Q Consensus 115 ~~~~l~g~g~~~~~~~~~~~~~~~FP--~~RG~avGi~~~~~GLg~ai~ 161 (309)
+.+.+...+.+..+.+......+.-+ ++|....+.-..+..+|+.+.
T Consensus 114 ~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~ 162 (460)
T PRK11462 114 ITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLS 162 (460)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334456677777777766666665 569999998766665555444
No 196
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.89 E-value=0.00046 Score=66.00 Aligned_cols=86 Identities=20% Similarity=0.147 Sum_probs=67.6
Q ss_pred hhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhH
Q 021692 32 GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPL 110 (309)
Q Consensus 32 ~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~ 110 (309)
.|.+.+| +++|++..|++.+...+.....+ +.+.|.+.||+|||+..++-+++..++.+.- + .+++
T Consensus 55 pY~Y~LY-----~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k------~--~~~~ 121 (354)
T PF05631_consen 55 PYLYALY-----ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK------H--SSNY 121 (354)
T ss_pred chhHHHH-----HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH------h--cccc
Confidence 5777666 46999999999998888776655 8899999999999999888888777665321 1 1368
Q ss_pred HHHHHHHHHHHhchhhhhhh
Q 021692 111 WAMCILIFVGNNGETYFNTA 130 (309)
Q Consensus 111 ~~l~~~~~l~g~g~~~~~~~ 130 (309)
+.+.+...++|++.+..+++
T Consensus 122 ~~L~~GRvlgGiaTSLLfS~ 141 (354)
T PF05631_consen 122 PVLLLGRVLGGIATSLLFSA 141 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 88888888999887776553
No 197
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.81 E-value=0.00046 Score=68.29 Aligned_cols=88 Identities=11% Similarity=0.042 Sum_probs=53.5
Q ss_pred CHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHH-HhCCCCChhHHHHHHHHHHHHhchhh
Q 021692 49 NQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLI-VTGRAPVLPLWAMCILIFVGNNGETY 126 (309)
Q Consensus 49 s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~-~~~~i~~~s~~~l~~~~~l~g~g~~~ 126 (309)
+....+.+.....++..+ .++.|++.||+|+|+++.++.++..++...+... ... ..+.+.+.+...+.+.+.+.
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~l~g~~~~~ 340 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAA---PHNALLIVIAGILLNIGTAL 340 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccC---chhHHHHHHHHHHHHHHHHH
Confidence 444444444444444444 4588999999999999998888766565544322 111 12455555555566666666
Q ss_pred hhhhHHHHHhhhc
Q 021692 127 FNTAALVSCVQNF 139 (309)
Q Consensus 127 ~~~~~~~~~~~~F 139 (309)
.+........+.-
T Consensus 341 ~~~~~~am~ad~i 353 (473)
T PRK10429 341 FWVLQVIMVADTV 353 (473)
T ss_pred HHHHHHHHHhhhh
Confidence 6655555555553
No 198
>PRK09669 putative symporter YagG; Provisional
Probab=97.79 E-value=0.00053 Score=67.06 Aligned_cols=136 Identities=14% Similarity=0.133 Sum_probs=73.9
Q ss_pred HHHHHHHhhhh-hhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHH
Q 021692 57 GVAKDLGDSVG-FLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSC 135 (309)
Q Consensus 57 ~~~~~vg~~~~-~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~ 135 (309)
.....+...++ ++.+++.||+|+|+...++.+...++.....+. .. .+.+.+.+...+.+.+.+..........
T Consensus 270 ~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~i~g~~~~~~~~~~~am~ 344 (444)
T PRK09669 270 LVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFI-PP----SNVWLIFALNILFNFIQNLTTPLQWSMF 344 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh-Cc----chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444454 478999999999999988877665433322221 11 2466566556667777776665555666
Q ss_pred hhhcC-------C-CCCcchhhh----hhhhhhhHHHHHHHHHHH-cc-C---Ch----HHHHHHHHHHHHHHHHHHHhh
Q 021692 136 VQNFP-------K-SRGPVVGIL----KGFAGLGGAILTQVYTMI-HA-P---DH----ANLIFMVAVGPAMVVIALMFI 194 (309)
Q Consensus 136 ~~~FP-------~-~RG~avGi~----~~~~GLg~ai~~~i~~~~-~~-~---~~----~~~~l~la~~~~~v~l~~~~~ 194 (309)
.+..+ + +.|...|+. |.+.++|+.+.+.+.... ++ + .+ ..-....+++|.+..+++..+
T Consensus 345 ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy~~~~~~q~~~~~~~i~~~~~~~p~~~~~~~~~~ 424 (444)
T PRK09669 345 SDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDYVGGAAVQSASVLTTINLLFTVIPGVLFAGMAII 424 (444)
T ss_pred HhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56664 1 124444543 455555655555554322 11 1 11 122233445566655555555
Q ss_pred ccc
Q 021692 195 IRP 197 (309)
Q Consensus 195 ir~ 197 (309)
++.
T Consensus 425 ~~~ 427 (444)
T PRK09669 425 LNF 427 (444)
T ss_pred HHh
Confidence 543
No 199
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.74 E-value=0.0052 Score=61.05 Aligned_cols=159 Identities=13% Similarity=0.063 Sum_probs=98.5
Q ss_pred HHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccc----cchHH-HHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHH
Q 021692 42 IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEV----LPIWG-ALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCI 115 (309)
Q Consensus 42 l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr----~Gpr~-vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~ 115 (309)
+.+.+|++...++.+..+.=+.-++ -++.|.+.|| +|+|| =+++|++-..+.+.+++..-.-... .+.+..++
T Consensus 39 YTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~-~k~~ya~v 117 (467)
T COG2211 39 YTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMT-GKLIYALV 117 (467)
T ss_pred HhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccC-cchHHHHH
Confidence 5788999999999887766666666 6789999997 67655 5777878777777666654321111 13444444
Q ss_pred HHHHHHhchhhhhhhHHHHHhhhcC--CCCCcchhhhhhhhhhhHHHH----HHHHHHHccCC-hHHHHHHHHHHHH---
Q 021692 116 LIFVGNNGETYFNTAALVSCVQNFP--KSRGPVVGILKGFAGLGGAIL----TQVYTMIHAPD-HANLIFMVAVGPA--- 185 (309)
Q Consensus 116 ~~~l~g~g~~~~~~~~~~~~~~~FP--~~RG~avGi~~~~~GLg~ai~----~~i~~~~~~~~-~~~~~l~la~~~~--- 185 (309)
-+.+.+.+.+..|.+.-....+.=+ ++|-...+.-..+..+|+.+. +|+...+-++| ...|.....+..+
T Consensus 118 tY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~ 197 (467)
T COG2211 118 TYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGV 197 (467)
T ss_pred HHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHH
Confidence 4555667777777776666666655 568888887766666665444 44444433343 4555544333322
Q ss_pred HHHHHHHhhcccCCCC
Q 021692 186 MVVIALMFIIRPVGGH 201 (309)
Q Consensus 186 ~v~l~~~~~ir~~p~~ 201 (309)
+..+.+.+-+|+++..
T Consensus 198 i~~l~~~~~v~ER~~~ 213 (467)
T COG2211 198 ILLLFCFFNVKERVVE 213 (467)
T ss_pred HHHHHHHHHhhcccCc
Confidence 2233445566776653
No 200
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.73 E-value=0.0012 Score=63.62 Aligned_cols=176 Identities=15% Similarity=0.113 Sum_probs=117.3
Q ss_pred hHHH-HHHHHHHHHHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHH-
Q 021692 15 RWLV-FVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNF- 91 (309)
Q Consensus 15 rw~~-l~~~~l~~~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~- 91 (309)
.|.. .++++--+.-++-.-.-+..+|.++...|.+..|...+......|..+ +...|.++|++|+|+-..+..+..+
T Consensus 76 q~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v 155 (528)
T KOG0253|consen 76 QWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGV 155 (528)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHH
Confidence 4443 333333334444444557788999999999999999998888888888 4599999999999998877776655
Q ss_pred HHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 92 IGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 92 ~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
.|++ ++. +|++..+|.+.++.+.|.|. +....+.-.+.-| .+|++-+-.. .+...|.++-..+.-....
T Consensus 156 ~~~i------s~~--spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~ 225 (528)
T KOG0253|consen 156 FGVI------SGA--SPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMS 225 (528)
T ss_pred HHHh------hcC--CCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHH
Confidence 3331 232 46889999998888887776 4444455557778 6788877665 7776776666655444434
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 021692 171 PDHANLIFMVAVGPAMVVIALMFIIRPVGG 200 (309)
Q Consensus 171 ~~~~~~~l~la~~~~~v~l~~~~~ir~~p~ 200 (309)
+-.+.|+++...+|........+++.+.|+
T Consensus 226 ~~gwr~~l~~~~~pl~~~a~f~~w~~ESpR 255 (528)
T KOG0253|consen 226 NFGWRYLLFTSSTPLMFAARFLVWVYESPR 255 (528)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHhhcccCcc
Confidence 433444555555665555555555555554
No 201
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.71 E-value=0.00049 Score=68.96 Aligned_cols=165 Identities=13% Similarity=0.093 Sum_probs=92.4
Q ss_pred hHHHHHHHHHHH---HHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHH
Q 021692 15 RWLVFVAAMWIQ---SCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQN 90 (309)
Q Consensus 15 rw~~l~~~~l~~---~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~ 90 (309)
.+..+..++.++ -++|..+. .-|++.+-+..|.+... ...+....+...+ ..+++++.||+|||++++.|...+
T Consensus 292 ~~~~~~i~~~l~~fqq~tG~~~~-~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m 369 (513)
T KOG0254|consen 292 VRKRLIIGLLLQLFQQLTGINYV-FYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGM 369 (513)
T ss_pred hHHHHHHHHHHHHHHHHhCCceE-EeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHH
Confidence 444444444443 33554333 35777776666666432 2222222222333 346689999999999999999999
Q ss_pred HHHHHHHHHHHhCCCC------ChhHHHHH-HHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHH
Q 021692 91 FIGYGWVWLIVTGRAP------VLPLWAMC-ILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILT 162 (309)
Q Consensus 91 ~~gy~l~~l~~~~~i~------~~s~~~l~-~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~ 162 (309)
.++..+++........ ....+.+. ....+.....++. ........+.|| +.|+.+.++..+.+.+.+.+..
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g-~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~ 448 (513)
T KOG0254|consen 370 SICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWG-PVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLIS 448 (513)
T ss_pred HHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccc-cchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHH
Confidence 9888777665433210 11112111 1222222222222 122246779999 6699999998888877777776
Q ss_pred HHHHHHccC-C-hHHHHHHHHH
Q 021692 163 QVYTMIHAP-D-HANLIFMVAV 182 (309)
Q Consensus 163 ~i~~~~~~~-~-~~~~~l~la~ 182 (309)
..+....+. . ...|..+.++
T Consensus 449 ~~~~~~~~~~~~~~~f~~f~~~ 470 (513)
T KOG0254|consen 449 FFFPFITEALGIGGTFGYFGGI 470 (513)
T ss_pred HHHHHHHHhccccchHHHHHHH
Confidence 655544332 2 4455545444
No 202
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.68 E-value=0.00017 Score=71.62 Aligned_cols=121 Identities=13% Similarity=0.027 Sum_probs=89.0
Q ss_pred HhhCCCHHHHHHHHHHHHHHhhhhh-hhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCC---CCChhHHHHHHHHHH
Q 021692 44 SSLNYNQKQIARLGVAKDLGDSVGF-LAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGR---APVLPLWAMCILIFV 119 (309)
Q Consensus 44 ~~lg~s~~~~~~i~~~~~vg~~~~~-~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~---i~~~s~~~l~~~~~l 119 (309)
+.+|++..+.+.+.....++..++. ..|++.+|++.|+++.++.++..++........+.- ...++.+.+.....+
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 4689999999998777777777644 889999999999999999998887764432111110 000123333334455
Q ss_pred HHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHH
Q 021692 120 GNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQV 164 (309)
Q Consensus 120 ~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i 164 (309)
.+.+.++...+....+++.-| +++|+..|+..+..++|..+.+.+
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~ 406 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFL 406 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHH
Confidence 666777788888999999999 569999999999999998888743
No 203
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.68 E-value=0.0024 Score=63.92 Aligned_cols=100 Identities=14% Similarity=0.031 Sum_probs=76.7
Q ss_pred hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCC--CCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCC
Q 021692 67 GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGR--APVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSR 143 (309)
Q Consensus 67 ~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~--i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~R 143 (309)
+...+++.||+++++.+.+|.++.++|+.......... ....+.|.+...+.+.+.|..+..........+.-| +.|
T Consensus 337 ~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~r 416 (500)
T PRK09584 337 AAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLM 416 (500)
T ss_pred HHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHH
Confidence 44568888899999999999999999998876643310 001245556666777888999988888888999999 569
Q ss_pred CcchhhhhhhhhhhHHHHHHHHH
Q 021692 144 GPVVGILKGFAGLGGAILTQVYT 166 (309)
Q Consensus 144 G~avGi~~~~~GLg~ai~~~i~~ 166 (309)
|.++|+.....++|+.+.+++..
T Consensus 417 g~~~g~~~l~~a~g~~~~g~~~~ 439 (500)
T PRK09584 417 GFIMGSWFLTTAGAALIAGYVAN 439 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999977777788888877765
No 204
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.67 E-value=0.0024 Score=62.21 Aligned_cols=115 Identities=10% Similarity=0.005 Sum_probs=71.9
Q ss_pred CCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchh
Q 021692 47 NYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGET 125 (309)
Q Consensus 47 g~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~ 125 (309)
+.+....+........+..+ -+++|++.||+++|+++.+..+...+...+... .. +.+.+.. ..+.+...+
T Consensus 265 ~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~--~~-----~~~~~~~-l~~~glf~s 336 (410)
T TIGR00885 265 GMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIF--AG-----GHVGLYC-LTLCSAFMS 336 (410)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH--cC-----ChHHHHH-HHHHHHHHH
Confidence 44444333322222233344 347899999999999988888777766655543 11 1222222 223344555
Q ss_pred hhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 126 YFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 126 ~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
..++.......+.+++++..+.+++.+.. +|+++++++...+.+
T Consensus 337 ~~fp~i~sl~~~~~g~~~~~~s~~l~~~~-~Gga~~p~l~G~~~d 380 (410)
T TIGR00885 337 LMFPTIYGIALKGLGQDTKYGAAGLVMAI-IGGGIVPPLQGFIID 380 (410)
T ss_pred HHHHHHHHHHHhhhhhhhhhhHHHHHHHH-hccchHHHHHHHHHH
Confidence 56677778888999977666555555555 999999998876654
No 205
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.65 E-value=0.0018 Score=60.54 Aligned_cols=118 Identities=9% Similarity=0.101 Sum_probs=78.1
Q ss_pred HHHhhCCCHHHHHHHHH-HHHHHhhhhhhhhhhccccchHHHHHHHHHHHH-HHHHHHHHHHhCCCCChhHHHHHHHHHH
Q 021692 42 IKSSLNYNQKQIARLGV-AKDLGDSVGFLAGSLCEVLPIWGALLVGALQNF-IGYGWVWLIVTGRAPVLPLWAMCILIFV 119 (309)
Q Consensus 42 l~~~lg~s~~~~~~i~~-~~~vg~~~~~~~G~L~Dr~Gpr~vllig~~l~~-~gy~l~~l~~~~~i~~~s~~~l~~~~~l 119 (309)
+++++|+|....+.+.+ +..+....+++.|.+.|++|.+......+.... +|-.+..+++-. ++..+ .+
T Consensus 291 F~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~ls-----Py~~m----~~ 361 (459)
T KOG4686|consen 291 FQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTFLS-----PYTSM----TF 361 (459)
T ss_pred HHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhhcc-----HHHHH----HH
Confidence 59999999999888754 444444558899999999999887666555554 554444332211 23333 33
Q ss_pred HHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 120 GNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 120 ~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
.|++..+.-.+....+...-| ++-|++-|...+-..||-++.+-+ .+++
T Consensus 362 lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Ii-ag~i 411 (459)
T KOG4686|consen 362 LGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPII-AGFI 411 (459)
T ss_pred HhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhh-hhee
Confidence 444444443334455667789 569999999999999998876655 4454
No 206
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.62 E-value=0.028 Score=56.23 Aligned_cols=139 Identities=14% Similarity=0.143 Sum_probs=74.0
Q ss_pred HHHHHHHh-hhhhhhhhhccccchHHHHHHHHHHHH-HHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHH
Q 021692 57 GVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNF-IGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVS 134 (309)
Q Consensus 57 ~~~~~vg~-~~~~~~G~L~Dr~Gpr~vllig~~l~~-~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~ 134 (309)
.++..+.. .+.++.|.++|+-|.|+-++......+ +...++++. .. .+++...+...++..+.+..+......
T Consensus 76 ~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v-~~----~~~~~~~~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 76 NSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFV-SP----GQWWLALVLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHh-Cc----chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333434 347789999999999887766665555 455555443 22 134444444555444433333333333
Q ss_pred HhhhcC-CCC--------------------------CcchhhhhhhhhhhHHHHHHHHHHHc---cCC------hHHHHH
Q 021692 135 CVQNFP-KSR--------------------------GPVVGILKGFAGLGGAILTQVYTMIH---APD------HANLIF 178 (309)
Q Consensus 135 ~~~~FP-~~R--------------------------G~avGi~~~~~GLg~ai~~~i~~~~~---~~~------~~~~~l 178 (309)
..+.=+ +++ +.+.|.--+..-+|+.+.-.+....+ +++ .+.-+.
T Consensus 151 LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~ 230 (477)
T PF11700_consen 151 LPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFL 230 (477)
T ss_pred hHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHH
Confidence 333333 234 67766643433355554433322222 112 233344
Q ss_pred HHHHHHHHHHHHHHhhcccCCC
Q 021692 179 MVAVGPAMVVIALMFIIRPVGG 200 (309)
Q Consensus 179 ~la~~~~~v~l~~~~~ir~~p~ 200 (309)
+.|+-.++.+++..+++|++|.
T Consensus 231 ~~a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 231 IVALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCCC
Confidence 5566666778888889988776
No 207
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.61 E-value=0.0011 Score=65.26 Aligned_cols=158 Identities=20% Similarity=0.299 Sum_probs=97.8
Q ss_pred hhHHHHHHhhCCCHHHHHHHHHHHHHHhhhhhhhhhhccccc-----hHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHH
Q 021692 37 SISPVIKSSLNYNQKQIARLGVAKDLGDSVGFLAGSLCEVLP-----IWGALLVGALQNFIGYGWVWLIVTGRAPVLPLW 111 (309)
Q Consensus 37 vys~~l~~~lg~s~~~~~~i~~~~~vg~~~~~~~G~L~Dr~G-----pr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~ 111 (309)
.-.+.+|+++|++.+|.+.......+...+-++.|.++|.++ +|+-+++|.++..++...+.+. .+.. .+..
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~-~~~~--~s~~ 87 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALL-PASE--SSAA 87 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhc-cccc--chhh
Confidence 334668999999999999998888888888999999999986 5666888888876665555443 2211 2344
Q ss_pred HHHHHHHHHHhchhhhhhhHHHHHh---hhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHHHHHHHHHH
Q 021692 112 AMCILIFVGNNGETYFNTAALVSCV---QNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAMV 187 (309)
Q Consensus 112 ~l~~~~~l~g~g~~~~~~~~~~~~~---~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~la~~~~~v 187 (309)
...++..+...|..+.|..+=...+ +.-|+.||.-.+..-...-+|+.+...+.....+. ++..-+...+.++.+.
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~ 167 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLM 167 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHH
Confidence 4445556667777777766655554 44565566655554444445655554443333332 2222233334455544
Q ss_pred HHHHHhhccc
Q 021692 188 VIALMFIIRP 197 (309)
Q Consensus 188 ~l~~~~~ir~ 197 (309)
.+.+.++.++
T Consensus 168 ~~~~~~~~~e 177 (433)
T PF03092_consen 168 LIVALFLLEE 177 (433)
T ss_pred HHHHHHhhhh
Confidence 4444444443
No 208
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.49 E-value=0.0019 Score=64.42 Aligned_cols=158 Identities=14% Similarity=0.087 Sum_probs=102.6
Q ss_pred hhhhhccchHHHHHHHHHHHHHhhhhhhH--HhhHHHHHH-hhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccch-HH
Q 021692 7 RFVSFFNNRWLVFVAAMWIQSCAGIGYLF--GSISPVIKS-SLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPI-WG 81 (309)
Q Consensus 7 ~~k~~~~~rw~~l~~~~l~~~~~g~~Y~f--svys~~l~~-~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gp-r~ 81 (309)
..++..+.+|+.+....+.++..+..+.. ..--|++++ +.+-+.+-.+++..+..++.++ .+..|+...|.|. |+
T Consensus 24 ~~~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~ 103 (488)
T KOG2325|consen 24 SPLDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKK 103 (488)
T ss_pred ccccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCccc
Confidence 44566788999888887777655443221 122255544 4777777788887777787766 7789999999996 77
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHH--HhhhcCCCCCcchhhhhhhhhhhHH
Q 021692 82 ALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVS--CVQNFPKSRGPVVGILKGFAGLGGA 159 (309)
Q Consensus 82 vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~--~~~~FP~~RG~avGi~~~~~GLg~a 159 (309)
-++.|.+...+|-.++.. ....- ...-|.+.+...+.|.|.+.. +.... ..+..+++|-++.+....+.-+|..
T Consensus 104 Pli~s~ii~~~g~llY~~-l~~~~-~~~~y~mL~~R~l~Gvg~~n~--a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~i 179 (488)
T KOG2325|consen 104 PLIVSFLIAIIGNLLYLA-LAYVP-NGVKYLMLVARILTGVGVGNF--AVLRAYIADASTVEDRPRAFAATSGGFVLGII 179 (488)
T ss_pred CHHHHHHHHHHHHHHHHH-HHhcc-cchHHHHHHHHHHcCcCcccH--HHHHHHHHhccCccchHHHHHHhhhHHHHHHH
Confidence 788899888888877622 22221 114667777777777765544 44433 3366888888888886666645544
Q ss_pred HHHHHHHHHc
Q 021692 160 ILTQVYTMIH 169 (309)
Q Consensus 160 i~~~i~~~~~ 169 (309)
++ |....+|
T Consensus 180 lG-p~~q~~f 188 (488)
T KOG2325|consen 180 LG-PTIQLAF 188 (488)
T ss_pred Hh-HHHHHHH
Confidence 44 3333333
No 209
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.46 E-value=0.00074 Score=67.73 Aligned_cols=136 Identities=24% Similarity=0.202 Sum_probs=83.3
Q ss_pred hhhhhhHHhhHHHHHHh-hCCCHHHHHHHHHHHHHHhhhh-hhhhhhccc----cchHHHHHHHHHHHH-HHHHHHHHHH
Q 021692 29 AGIGYLFGSISPVIKSS-LNYNQKQIARLGVAKDLGDSVG-FLAGSLCEV----LPIWGALLVGALQNF-IGYGWVWLIV 101 (309)
Q Consensus 29 ~g~~Y~fsvys~~l~~~-lg~s~~~~~~i~~~~~vg~~~~-~~~G~L~Dr----~Gpr~vllig~~l~~-~gy~l~~l~~ 101 (309)
-...|.++.+.|.+-++ .|+|..+.+.+++..+++..++ +++|.++|| ...|....+...+.. .|+..+..
T Consensus 286 ~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~-- 363 (495)
T KOG2533|consen 286 KLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLA-- 363 (495)
T ss_pred hhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 34577788788777444 7799999999999999998884 589999999 666666666665555 66544432
Q ss_pred hCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC--CCCCcchhhhhhhhhhhHHHHHHHHHHHccC
Q 021692 102 TGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP--KSRGPVVGILKGFAGLGGAILTQVYTMIHAP 171 (309)
Q Consensus 102 ~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP--~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~ 171 (309)
... .+....+...+..+.......+..-+..+.. .+|-+.+++...+.|.++++.+|++.....+
T Consensus 364 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap 430 (495)
T KOG2533|consen 364 AAV-----LPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAP 430 (495)
T ss_pred hcc-----chHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCc
Confidence 111 1111111111111122222233333445554 3455666666777788888889988765543
No 210
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.39 E-value=0.028 Score=54.78 Aligned_cols=195 Identities=16% Similarity=0.124 Sum_probs=104.8
Q ss_pred HHHhhCCCHHHHHHHHHHHHHHhhhhhhhhhhccccc-----hHHHHHH-HHHHHHHHHHHHHHH---HhC---CCC-Ch
Q 021692 42 IKSSLNYNQKQIARLGVAKDLGDSVGFLAGSLCEVLP-----IWGALLV-GALQNFIGYGWVWLI---VTG---RAP-VL 108 (309)
Q Consensus 42 l~~~lg~s~~~~~~i~~~~~vg~~~~~~~G~L~Dr~G-----pr~vlli-g~~l~~~gy~l~~l~---~~~---~i~-~~ 108 (309)
+..+++.+..-.+.....-.+..-+-+..|..+|+.+ +|.-.++ |.++.+.|..+.... ..+ ... ..
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~ 85 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAPLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPF 85 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccccc
Confidence 4456777765544443333333333457999999999 7766444 444444544433221 122 000 11
Q ss_pred hHHHH--HHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHccC-ChHHHHHH---HH
Q 021692 109 PLWAM--CILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFM---VA 181 (309)
Q Consensus 109 s~~~l--~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~-~~~~~~l~---la 181 (309)
..|.. ++.+.+.|.|.+...|+......+.=| ++|+.+++++-...=+|..+.+-++..++++ ++....-. .+
T Consensus 86 ~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a 165 (403)
T PF03209_consen 86 WLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVA 165 (403)
T ss_pred HHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHH
Confidence 23332 234456778888888999999999998 7899999998777645555555555656654 33333222 22
Q ss_pred HHHHHHHHHHHhhcccCCCCCC-CCCCC--------------CcchhHHHHHHHHHHHHHHHHHhhhhhc
Q 021692 182 VGPAMVVIALMFIIRPVGGHRQ-VRPSD--------------SSSFTFIYSVCLLLAAYLMGVMLVEDLV 236 (309)
Q Consensus 182 ~~~~~v~l~~~~~ir~~p~~~~-~~~~~--------------~~~f~~~~~~~~~l~~yl~~~~~~~~~~ 236 (309)
++..++.+++.+=+..+.+.+. .+.+| ++.-++...+.+....|.+=..++|.|-
T Consensus 166 ~i~~~l~~ia~wg~E~r~~~~~~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPyg 235 (403)
T PF03209_consen 166 LIALLLNLIALWGQEPRRSRRAAAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYG 235 (403)
T ss_pred HHHHHHHHHHHHhcccCCcccccCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCch
Confidence 2223333333333322211111 01111 1112222335567778888888887765
No 211
>PRK11462 putative transporter; Provisional
Probab=97.25 E-value=0.014 Score=57.87 Aligned_cols=37 Identities=11% Similarity=-0.066 Sum_probs=24.2
Q ss_pred HHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHH
Q 021692 56 LGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFI 92 (309)
Q Consensus 56 i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~ 92 (309)
+.....++..+ .++++++.||+|.|++...+.....+
T Consensus 268 ~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~ 305 (460)
T PRK11462 268 FLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAV 305 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 33333344444 45899999999999987765554443
No 212
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.25 E-value=0.018 Score=57.29 Aligned_cols=124 Identities=12% Similarity=0.076 Sum_probs=85.1
Q ss_pred hhhhhccc-cchHHHH--HHHHHHHHHHHHHHHHHHh--CCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CC
Q 021692 69 LAGSLCEV-LPIWGAL--LVGALQNFIGYGWVWLIVT--GRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KS 142 (309)
Q Consensus 69 ~~G~L~Dr-~Gpr~vl--lig~~l~~~gy~l~~l~~~--~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~ 142 (309)
+..++.|| .+++... .+|.++..+++....+... +.-...++|.+...+.+.+.|-.+..+.......+.-| +.
T Consensus 335 ~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~ 414 (475)
T TIGR00924 335 IWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL 414 (475)
T ss_pred HHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH
Confidence 34566666 4555544 7888888888877654311 10001267777777778888988998888888889999 56
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHH
Q 021692 143 RGPVVGILKGFAGLGGAILTQVYTMIHA-PDHANLIFMVAVGPAMVVIALM 192 (309)
Q Consensus 143 RG~avGi~~~~~GLg~ai~~~i~~~~~~-~~~~~~~l~la~~~~~v~l~~~ 192 (309)
||...|+.....++|..+.+.+...... .+...++..+++...+++++..
T Consensus 415 ~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (475)
T TIGR00924 415 MGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMA 465 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHH
Confidence 9999999988888998888777664432 3455555566665555554443
No 213
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.24 E-value=0.0067 Score=60.29 Aligned_cols=129 Identities=15% Similarity=0.072 Sum_probs=76.7
Q ss_pred hhccchHHHHHHHHHHHHHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHH
Q 021692 10 SFFNNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGAL 88 (309)
Q Consensus 10 ~~~~~rw~~l~~~~l~~~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~ 88 (309)
..++||.+.+.+.+.+....+.+-.=+++.=..+-.+|.+..+..........+... .++..++.+|+|+|++..+|.+
T Consensus 231 ~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~ 310 (467)
T COG2211 231 LIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLL 310 (467)
T ss_pred HHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHH
Confidence 455666655544444433222211111111112334555555554555555555555 4488999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHH------HhhhcCCCC
Q 021692 89 QNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVS------CVQNFPKSR 143 (309)
Q Consensus 89 l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~------~~~~FP~~R 143 (309)
+..+++.++++... .+.+.+.+..++.+.|.+..+.-.... --||-..+|
T Consensus 311 ~~~i~~~~~~f~~~-----~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R 366 (467)
T COG2211 311 LLAVGYLLLYFTPA-----GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVR 366 (467)
T ss_pred HHHHHHHHHHhhcC-----cchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCC
Confidence 99999999987542 256777666677777766655443333 336666333
No 214
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.20 E-value=0.1 Score=51.01 Aligned_cols=52 Identities=17% Similarity=0.118 Sum_probs=39.1
Q ss_pred HHHhhCCCHHHHHHHHHHHHHHhhhhh-hhhhhccccc-hHHHHHHHHHHHHHH
Q 021692 42 IKSSLNYNQKQIARLGVAKDLGDSVGF-LAGSLCEVLP-IWGALLVGALQNFIG 93 (309)
Q Consensus 42 l~~~lg~s~~~~~~i~~~~~vg~~~~~-~~G~L~Dr~G-pr~vllig~~l~~~g 93 (309)
+-++.|+|..|++.+.....+...+++ +.|.++||.+ +|+++.+..++.++.
T Consensus 28 ~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~ 81 (400)
T PF03825_consen 28 YLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALA 81 (400)
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHH
Confidence 344578999999999888888887755 8999999986 466666655554443
No 215
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.18 E-value=0.04 Score=53.66 Aligned_cols=153 Identities=20% Similarity=0.132 Sum_probs=98.7
Q ss_pred hhhhccchHHHHHHHHHHH-HHhhhhhhHHhhHHHHHHh-hCCCHHHHHHHHHHHHHHhhhhh-hhhhhccccchHHHHH
Q 021692 8 FVSFFNNRWLVFVAAMWIQ-SCAGIGYLFGSISPVIKSS-LNYNQKQIARLGVAKDLGDSVGF-LAGSLCEVLPIWGALL 84 (309)
Q Consensus 8 ~k~~~~~rw~~l~~~~l~~-~~~g~~Y~fsvys~~l~~~-lg~s~~~~~~i~~~~~vg~~~~~-~~G~L~Dr~Gpr~vll 84 (309)
..+.+++|+.. .+.+.+ +..|..-+.+.|.+.+..+ .|.+..|.+...+..-.+..+|- .+-++..|+-|.+++.
T Consensus 229 ~~~l~~~~~~~--~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~La 306 (422)
T COG0738 229 LSSLFQNKHLR--LGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLA 306 (422)
T ss_pred HHHHHhChHHH--HHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 34445555443 345555 5577765666666555444 88899888887776667777776 5667777999999988
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHH
Q 021692 85 VGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQV 164 (309)
Q Consensus 85 ig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i 164 (309)
.-++...+-.....+ .+ +.+.++...+ .|...+..+........++.|++-..+.+++.+.. .|+++.+++
T Consensus 307 f~a~~~ill~~~~~l--~~-----g~v~~~~l~~-ig~F~simfPTIfslal~~l~~~ts~~s~~l~mai-vGGAiiP~l 377 (422)
T COG0738 307 FYALIAILLLLAVAL--IG-----GVVALYALFL-IGLFNSIMFPTIFSLALKNLGEHTSVGSGLLVMAI-VGGAIIPPL 377 (422)
T ss_pred HHHHHHHHHHHHHHH--hc-----ChHHHHHHHH-HHHHhHHHHHHHHHHHHhccCccccccceeeeehe-ecchHHHHH
Confidence 777554433333322 33 3444443333 34456667777778888999976666666655555 999999999
Q ss_pred HHHHccC
Q 021692 165 YTMIHAP 171 (309)
Q Consensus 165 ~~~~~~~ 171 (309)
.....+.
T Consensus 378 ~G~i~d~ 384 (422)
T COG0738 378 QGVIADM 384 (422)
T ss_pred HHHHHHh
Confidence 8766543
No 216
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.18 E-value=1.3e-06 Score=85.02 Aligned_cols=135 Identities=16% Similarity=0.182 Sum_probs=75.7
Q ss_pred hhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHH-HHHhCCCCC--h
Q 021692 33 YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVW-LIVTGRAPV--L 108 (309)
Q Consensus 33 Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~-l~~~~~i~~--~ 108 (309)
+....|.+.+.+..+.+... .......+...+ .+.+.++.||+|||++++++.....+....+. ......-.. .
T Consensus 270 ~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (451)
T PF00083_consen 270 NFIFYYSPSIFENAGISNSF--LATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWW 347 (451)
T ss_pred cccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 34456777787777777761 111111122223 33667999999999999999888776655443 011111000 0
Q ss_pred hHHHHHHHH-HHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 109 PLWAMCILI-FVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 109 s~~~l~~~~-~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
+.+.+.... .....+.++ +........|.|| +.|++++|+.....-+++.+.+.++....+
T Consensus 348 ~~~~i~~~~l~~~~~~~g~-~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~ 410 (451)
T PF00083_consen 348 SILSIVFLALFFAFFSLGW-GPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFN 410 (451)
T ss_pred ccccceeeeeccccccccc-cccccccccccccccccccccccccccccccccccccccccccc
Confidence 122222111 112222222 2333355689999 669999999888777777776666544443
No 217
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.11 E-value=0.0039 Score=63.90 Aligned_cols=150 Identities=16% Similarity=0.189 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHhhh-hhhHHhhHHH-HHHhhCCCHH---HHHHHHHHHHHHhhh-hhhhhhhccccch-HHHHHHHHHH
Q 021692 17 LVFVAAMWIQSCAGI-GYLFGSISPV-IKSSLNYNQK---QIARLGVAKDLGDSV-GFLAGSLCEVLPI-WGALLVGALQ 89 (309)
Q Consensus 17 ~~l~~~~l~~~~~g~-~Y~fsvys~~-l~~~lg~s~~---~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gp-r~vllig~~l 89 (309)
+.+.+.+.+.+..|. .|....+-|+ ....|+-+.. +.+..+....++..+ +.+.|.+.-++++ |+.+++|.++
T Consensus 310 r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~ 389 (599)
T PF06609_consen 310 RGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVL 389 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHH
Confidence 445555555555555 4444444444 3555655442 344555555555555 3467888877765 4556677777
Q ss_pred HHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHH
Q 021692 90 NFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMI 168 (309)
Q Consensus 90 ~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~ 168 (309)
+.++..++... ... +......+..+.|.|.++....+...+.-.-| ++-|+++|++.+..-+|++|+..++.+.
T Consensus 390 ~ta~~Gama~~-~~~----n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I 464 (599)
T PF06609_consen 390 MTAFCGAMAAV-RPD----NKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAI 464 (599)
T ss_pred HHHHHHHHHHc-cCC----CcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 66655554432 221 22233455667888888887677666656667 6699999999999999999999999888
Q ss_pred ccC
Q 021692 169 HAP 171 (309)
Q Consensus 169 ~~~ 171 (309)
+.+
T Consensus 465 ~~n 467 (599)
T PF06609_consen 465 FTN 467 (599)
T ss_pred HHh
Confidence 854
No 218
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=96.96 E-value=0.23 Score=48.82 Aligned_cols=115 Identities=11% Similarity=0.102 Sum_probs=65.9
Q ss_pred hhhhHHhhHHHHHHhhCCCHHH----HHHHHHHHHH-HhhhhhhhhhhccccchHHHHHHHHH-HHHHHHHHHHHHHhCC
Q 021692 31 IGYLFGSISPVIKSSLNYNQKQ----IARLGVAKDL-GDSVGFLAGSLCEVLPIWGALLVGAL-QNFIGYGWVWLIVTGR 104 (309)
Q Consensus 31 ~~Y~fsvys~~l~~~lg~s~~~----~~~i~~~~~v-g~~~~~~~G~L~Dr~Gpr~vllig~~-l~~~gy~l~~l~~~~~ 104 (309)
+.+.|++|-..-...-|.+..+ .+...+...+ ...++++-|.++|+.|+|+..+--.. ...+...++|+...+
T Consensus 34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~- 112 (438)
T COG2270 34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPG- 112 (438)
T ss_pred eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCC-
Confidence 4667777743333332223322 2333333333 34558899999999999887543333 333455555554333
Q ss_pred CCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCC-CCCcchhh
Q 021692 105 APVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGI 149 (309)
Q Consensus 105 i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~-~RG~avGi 149 (309)
.++|...+++.+...+....+...-....+..++ +-|.+.++
T Consensus 113 ---s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~l 155 (438)
T COG2270 113 ---SYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGL 155 (438)
T ss_pred ---chHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCccccc
Confidence 2466666677777777777776666777777774 33444444
No 219
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=96.94 E-value=0.0033 Score=62.13 Aligned_cols=150 Identities=12% Similarity=0.028 Sum_probs=91.4
Q ss_pred HHHHHHHHHH-HHhhhhhhHHhhHHHHHHhhCCCHHHHHH-----HHHHHH---HHhhh-hh-hhhhhccccchHHHHHH
Q 021692 17 LVFVAAMWIQ-SCAGIGYLFGSISPVIKSSLNYNQKQIAR-----LGVAKD---LGDSV-GF-LAGSLCEVLPIWGALLV 85 (309)
Q Consensus 17 ~~l~~~~l~~-~~~g~~Y~fsvys~~l~~~lg~s~~~~~~-----i~~~~~---vg~~~-~~-~~G~L~Dr~Gpr~vlli 85 (309)
..|....... ...-..|..++++..+-++.|+..++-.. ++.... +...+ |. +...+.|+.||++..+-
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 6666666666 34567899999999998888887655443 222222 22233 44 67889999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHH
Q 021692 86 GALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQV 164 (309)
Q Consensus 86 g~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i 164 (309)
|.+++.+-++......++......+..++....+.+ .-..|+.......+.|| +-||+.-||..+.-=.|+.+....
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~--NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~ 461 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFG--NFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFG 461 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHH--hcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHH
Confidence 998888666555444342221111222222222211 11234455556779999 669999999655444555555544
Q ss_pred HHHH
Q 021692 165 YTMI 168 (309)
Q Consensus 165 ~~~~ 168 (309)
+...
T Consensus 462 F~~~ 465 (538)
T KOG0252|consen 462 FLYL 465 (538)
T ss_pred hhHh
Confidence 4433
No 220
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=96.92 E-value=0.014 Score=57.21 Aligned_cols=50 Identities=14% Similarity=0.041 Sum_probs=36.5
Q ss_pred HHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHH
Q 021692 35 FGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALL 84 (309)
Q Consensus 35 fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vll 84 (309)
++.++..++++.|+|.+|++.+.++..+...+ .++.|.+.||+|-|+-++
T Consensus 27 ~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll 77 (412)
T PF01306_consen 27 LPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLL 77 (412)
T ss_dssp HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHH
T ss_pred HHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHH
Confidence 34455557888999999999998887776655 788999999999766443
No 221
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=96.90 E-value=0.078 Score=51.75 Aligned_cols=107 Identities=21% Similarity=0.235 Sum_probs=84.5
Q ss_pred HHHHHhhCCCHHHHHHHHHHHHHHhhhhh-hhhhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHH
Q 021692 40 PVIKSSLNYNQKQIARLGVAKDLGDSVGF-LAGSLCE-VLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILI 117 (309)
Q Consensus 40 ~~l~~~lg~s~~~~~~i~~~~~vg~~~~~-~~G~L~D-r~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~ 117 (309)
|+=.+.+|.|.+|.+.++.....|..++. ..|++.. |.++++...+|+....+++.+..+ .+.. .+.|.+....
T Consensus 233 Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~--a~~~--~~~~~~~~~~ 308 (403)
T PF03209_consen 233 PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIIL--AGPL--GSPWLFRPGV 308 (403)
T ss_pred CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHH--HHhc--ccchHHHHHH
Confidence 44467799999999998888888887766 6777766 899999999999998888766543 3433 2567777777
Q ss_pred HHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhh
Q 021692 118 FVGNNGETYFNTAALVSCVQNFP-KSRGPVVGIL 150 (309)
Q Consensus 118 ~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~ 150 (309)
.+.|+|.|.+..+++...++.-+ ++.|+.+|.-
T Consensus 309 ~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~W 342 (403)
T PF03209_consen 309 FLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAW 342 (403)
T ss_pred HHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHH
Confidence 88999999999999999998886 6678777764
No 222
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.90 E-value=0.039 Score=57.35 Aligned_cols=129 Identities=9% Similarity=-0.015 Sum_probs=78.0
Q ss_pred hhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccc-cchHHHHHHHHHHHHHHHHHHHHHHhCCCCC-hhHHHH
Q 021692 37 SISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEV-LPIWGALLVGALQNFIGYGWVWLIVTGRAPV-LPLWAM 113 (309)
Q Consensus 37 vys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr-~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~-~s~~~l 113 (309)
++...+.+.+|+++++...+........++ ++++|+++|+ +|+++.++++.++..+|+.+..+........ ......
T Consensus 9 iLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~ 88 (654)
T TIGR00926 9 ILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLD 88 (654)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHH
Confidence 334447778999999887765444443444 6699999998 7999999999999999998876532111000 011223
Q ss_pred HHHHHHHHhchhhhhhhHHHHHhhhcCC-C---CCcchhhhhhhhhhhHHHHHHHH
Q 021692 114 CILIFVGNNGETYFNTAALVSCVQNFPK-S---RGPVVGILKGFAGLGGAILTQVY 165 (309)
Q Consensus 114 ~~~~~l~g~g~~~~~~~~~~~~~~~FP~-~---RG~avGi~~~~~GLg~ai~~~i~ 165 (309)
.+...+++.|.+.+-+.......+-|++ + |-..-.+.-....+|+.+.+.+.
T Consensus 89 l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~ 144 (654)
T TIGR00926 89 LLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIIT 144 (654)
T ss_pred HHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334456667777665555666688873 2 33333332233335655544443
No 223
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.88 E-value=0.02 Score=50.08 Aligned_cols=120 Identities=26% Similarity=0.261 Sum_probs=77.4
Q ss_pred hHHHHHHhhCCCH--HHHHHHHHHHHHHhhhh-hhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHH
Q 021692 38 ISPVIKSSLNYNQ--KQIARLGVAKDLGDSVG-FLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMC 114 (309)
Q Consensus 38 ys~~l~~~lg~s~--~~~~~i~~~~~vg~~~~-~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~ 114 (309)
..+.+..+++.+. .+.+.......++..++ ++.|.+.||+|+|+....+......+..+..+ ... .+.+.+.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~ 98 (338)
T COG0477 24 ALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLAL--APN---VGLALLL 98 (338)
T ss_pred HHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHh--Ccc---chHHHHH
Confidence 3344555555554 35566656556666664 69999999999998888887664444333322 111 1356666
Q ss_pred HHHHHHHhchhhhhhhHHHHHhhhcCC--CCCcchhhhhhh-hhhhHHHHH
Q 021692 115 ILIFVGNNGETYFNTAALVSCVQNFPK--SRGPVVGILKGF-AGLGGAILT 162 (309)
Q Consensus 115 ~~~~l~g~g~~~~~~~~~~~~~~~FP~--~RG~avGi~~~~-~GLg~ai~~ 162 (309)
......|.+.+...........+++|+ +|+...++.... ..+|..+.+
T Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (338)
T COG0477 99 ILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGP 149 (338)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 655556777777777788888899996 789888887663 434444433
No 224
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.83 E-value=0.014 Score=58.29 Aligned_cols=136 Identities=22% Similarity=0.235 Sum_probs=79.3
Q ss_pred hhhhHHhhHHHH-HHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccch-------HHHHHHHHHHHHHHHHHHHHHH
Q 021692 31 IGYLFGSISPVI-KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPI-------WGALLVGALQNFIGYGWVWLIV 101 (309)
Q Consensus 31 ~~Y~fsvys~~l-~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gp-------r~vllig~~l~~~gy~l~~l~~ 101 (309)
..|.+-.|.|.+ ++.+|+|-.+.+..+..-.+...+ .+.+|.++||.-. ++-+.=.......+..+..+.+
T Consensus 273 ~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~ 352 (466)
T KOG2532|consen 273 GFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAF 352 (466)
T ss_pred HHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeee
Confidence 467777888755 888999999999988777666655 7799999999865 2222222222222322332222
Q ss_pred hCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhh-cCCCCCcchhhhhhhhhhhHHHHHHHHHHHcc
Q 021692 102 TGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQN-FPKSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (309)
Q Consensus 102 ~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~-FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~ 170 (309)
.+.- ..+..+.++.. +.+...++.+-...+..- =|++-|.++|+......+++.+.+.+...+.+
T Consensus 353 ~~~~--~~~~a~~~l~~--~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~ 418 (466)
T KOG2532|consen 353 TSDE--HRLLAVILLTI--AIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVT 418 (466)
T ss_pred cCCC--cchHHHHHHHH--HHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeC
Confidence 3321 12222222211 112222222233333433 78999999999888887887777776665553
No 225
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.76 E-value=0.04 Score=54.80 Aligned_cols=131 Identities=18% Similarity=0.289 Sum_probs=91.4
Q ss_pred hhhHHhhHHHHHH--hhCCCHHHHHHHHH-HHHHHhhh-hhhhhhh---ccccchHHHHHHHHHHHHHHHHHHHHHHhCC
Q 021692 32 GYLFGSISPVIKS--SLNYNQKQIARLGV-AKDLGDSV-GFLAGSL---CEVLPIWGALLVGALQNFIGYGWVWLIVTGR 104 (309)
Q Consensus 32 ~Y~fsvys~~l~~--~lg~s~~~~~~i~~-~~~vg~~~-~~~~G~L---~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~ 104 (309)
.|-.++|...+.- ..+.+...+..+.. ...+|... +.+.+.+ .+|+|+++++.++..+...++.+..+.....
T Consensus 257 Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~d 336 (461)
T KOG3098|consen 257 SFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPND 336 (461)
T ss_pred HHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhcccccc
Confidence 4555777766632 44555544444433 22344544 4555555 5668999999999999998888876654332
Q ss_pred CC-----------ChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHH
Q 021692 105 AP-----------VLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILT 162 (309)
Q Consensus 105 i~-----------~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~ 162 (309)
.+ .++.....+...+.|.+-+..++...+.+...+|++|-.+-.+.|.+.++++++..
T Consensus 337 ap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v~~ 405 (461)
T KOG3098|consen 337 APLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYPDDRAQAFSLFKFYQSVASCVAF 405 (461)
T ss_pred CCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHh
Confidence 21 11344445556678889999999999999999999999999999999998887643
No 226
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=96.70 E-value=0.018 Score=55.74 Aligned_cols=90 Identities=17% Similarity=0.101 Sum_probs=56.9
Q ss_pred hh-hhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHH--HHHHHHHHhchhhhhhhHHHHHhhhcC-CC
Q 021692 67 GF-LAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAM--CILIFVGNNGETYFNTAALVSCVQNFP-KS 142 (309)
Q Consensus 67 ~~-~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l--~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~ 142 (309)
|. +.|++.||+|||+.+....+.+++-.++...+.+ ++...+ +.+.+. ....+.+.++...+.|| ..
T Consensus 397 GlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~-----rn~~tvllf~araf----isg~fqvaYvYtPEVyPTav 467 (528)
T KOG0253|consen 397 GLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKT-----RNAYTVLLFTARAF----ISGAFQVAYVYTPEVYPTAV 467 (528)
T ss_pred chhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcC-----cchhHHHHHHHHHH----HhchheEEEEecCcccchhh
Confidence 44 7999999999999998887777644333322222 133332 222222 12233445556679999 55
Q ss_pred CCcchhhhhhhhhhhHHHHHHHH
Q 021692 143 RGPVVGILKGFAGLGGAILTQVY 165 (309)
Q Consensus 143 RG~avGi~~~~~GLg~ai~~~i~ 165 (309)
|++++|...+..-+|+.+-+.+.
T Consensus 468 RatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 468 RATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred hhcchhhhhhHHhhhhhhhhHHH
Confidence 99999998888888865555444
No 227
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.62 E-value=0.12 Score=51.52 Aligned_cols=126 Identities=14% Similarity=0.102 Sum_probs=79.8
Q ss_pred hhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcch
Q 021692 69 LAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVV 147 (309)
Q Consensus 69 ~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~av 147 (309)
..+...||+|||.....+..+..++++.+....... ..+.......++..+.+..+........+.+| ..|+.++
T Consensus 369 ~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~ 444 (521)
T KOG0255|consen 369 RNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDL----GGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAV 444 (521)
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 568999999999999999999999988877654432 11233333334444444444466778889999 5599999
Q ss_pred hhhhhhhhhhHHHHHHHHHHHccCCh-HHHHHHHHHHHHHHHHHHHhhcccCC
Q 021692 148 GILKGFAGLGGAILTQVYTMIHAPDH-ANLIFMVAVGPAMVVIALMFIIRPVG 199 (309)
Q Consensus 148 Gi~~~~~GLg~ai~~~i~~~~~~~~~-~~~~l~la~~~~~v~l~~~~~ir~~p 199 (309)
|...+..-+|+++.+.+....-...+ ..+.+ .++...+.++++..++.++.
T Consensus 445 ~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~lpet~ 496 (521)
T KOG0255|consen 445 GAISAAARLGSILAPLFPLLLRQMFPLLGLIL-FGWLALLLGLLSLLLLPETK 496 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccchHHH-HHHHHHHHHHHHHhcCcccC
Confidence 99888887877776665432211111 11222 34444445555556665543
No 228
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.51 E-value=0.0038 Score=58.47 Aligned_cols=125 Identities=20% Similarity=0.173 Sum_probs=89.3
Q ss_pred HHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccc-cchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHH
Q 021692 39 SPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEV-LPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCIL 116 (309)
Q Consensus 39 s~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr-~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~ 116 (309)
..+.|.+.+.+.++..++.+....-..+ ..++|++.|| +|-|.-.++=+...++|-+.|.. |.+. .++|.+..-
T Consensus 67 q~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~---Ggi~-~aFw~M~~G 142 (459)
T KOG4686|consen 67 QIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAA---GGIS-HAFWTMLAG 142 (459)
T ss_pred hhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHh---chHH-HHHHHHHhh
Confidence 3445666666666766665544444433 5689999998 78887777766667788777753 4342 369999988
Q ss_pred HHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHH----HHHHHH
Q 021692 117 IFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAIL----TQVYTM 167 (309)
Q Consensus 117 ~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~----~~i~~~ 167 (309)
.++.|+|.--.-.+.....+.||. +.-+.+.|+..+..-+|+.+= ++++..
T Consensus 143 RF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~ 198 (459)
T KOG4686|consen 143 RFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDT 198 (459)
T ss_pred heeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHH
Confidence 888888877776777788889999 779999999877777777642 455543
No 229
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.18 E-value=0.031 Score=41.71 Aligned_cols=48 Identities=23% Similarity=0.204 Sum_probs=39.7
Q ss_pred HHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHH
Q 021692 42 IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQ 89 (309)
Q Consensus 42 l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l 89 (309)
..++.|+|..|++.+..+.-+...+ .++.|.++||++.++..+.+...
T Consensus 26 ~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 26 YLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred hhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 3446999999999998887777777 55899999999999988877654
No 230
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.11 E-value=0.046 Score=41.76 Aligned_cols=68 Identities=22% Similarity=0.215 Sum_probs=58.9
Q ss_pred hhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhhhh-hhhhhccccchHHHHHHHHHHHHHHHHHHHH
Q 021692 32 GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSVGF-LAGSLCEVLPIWGALLVGALQNFIGYGWVWL 99 (309)
Q Consensus 32 ~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~~~-~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l 99 (309)
-+.|+-.-|.++++.++|.+|.+.+.++..+|..+|- ...++.+|..+++.+..+.+...+......+
T Consensus 8 RFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~ 76 (85)
T PF06779_consen 8 RFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMAL 76 (85)
T ss_pred HHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 6778888899999999999999999999999998865 7888899989999999999888877666554
No 231
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=96.10 E-value=0.076 Score=49.77 Aligned_cols=61 Identities=16% Similarity=0.095 Sum_probs=53.4
Q ss_pred hHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 109 PLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 109 s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
+++.+.+..++.|.|.++..+++...+....| +++...+++..+++|+|+.+.+.+...++
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i 70 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLI 70 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 67778788888999999999999999999998 67999999999999999988877777655
No 232
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=95.78 E-value=0.62 Score=45.07 Aligned_cols=106 Identities=13% Similarity=0.002 Sum_probs=68.4
Q ss_pred HHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccc-hHHHHHHHHHHHHHHHHHHHHHHhCC
Q 021692 27 SCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLP-IWGALLVGALQNFIGYGWVWLIVTGR 104 (309)
Q Consensus 27 ~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~G-pr~vllig~~l~~~gy~l~~l~~~~~ 104 (309)
.-+...|+.--+.|++-.+.|+|..+.+.+.....+.... +...-.+.+|.. .|+......+++.+|+..+++.-..
T Consensus 219 lqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~- 297 (395)
T COG2807 219 LQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQ- 297 (395)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhh-
Confidence 4456678777788999899999999998776555554433 455556666543 4566666666777888887654222
Q ss_pred CCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC
Q 021692 105 APVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP 140 (309)
Q Consensus 105 i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP 140 (309)
.+.++ ..+.|.|.+..+.-++..+..-.+
T Consensus 298 -----~~~lw--~~llG~G~G~~F~laL~li~~rs~ 326 (395)
T COG2807 298 -----LPILW--ALLLGLGQGGAFPLALTLILLRSS 326 (395)
T ss_pred -----HHHHH--HHHHhCccchHHHHHHHHHHhhcC
Confidence 11222 245677777766666666665554
No 233
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=95.65 E-value=0.12 Score=44.02 Aligned_cols=88 Identities=13% Similarity=-0.037 Sum_probs=63.8
Q ss_pred hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCc
Q 021692 67 GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGP 145 (309)
Q Consensus 67 ~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~ 145 (309)
.++++.+.+++|+|+.+++|.+... ++....-- ++.|.+.....+.|.|.+...++.-..+.++-. ++|++
T Consensus 54 ~l~~P~iv~~lg~K~sm~lg~~~y~----~y~~~~~~----~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~ 125 (156)
T PF05978_consen 54 CLFAPSIVNKLGPKWSMILGSLGYA----IYIASFFY----PNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGR 125 (156)
T ss_pred HHhHHHHHHHHhhHHHHHHHHHHHH----HHHHHHHh----hhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhh
Confidence 4567888999999999999997554 33222211 356777777888999999999888888888887 55888
Q ss_pred chhhhhhhhhhhHHHHH
Q 021692 146 VVGILKGFAGLGGAILT 162 (309)
Q Consensus 146 avGi~~~~~GLg~ai~~ 162 (309)
-.|+..+....|..+..
T Consensus 126 ~~~ifw~i~~~s~i~G~ 142 (156)
T PF05978_consen 126 NTGIFWAIFQSSLIFGN 142 (156)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88886666655444433
No 234
>PRK03612 spermidine synthase; Provisional
Probab=95.53 E-value=3 Score=42.27 Aligned_cols=61 Identities=16% Similarity=0.163 Sum_probs=34.4
Q ss_pred hHHHHHHHHHHHHHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhhhh-hhhhhccc
Q 021692 15 RWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSVGF-LAGSLCEV 76 (309)
Q Consensus 15 rw~~l~~~~l~~~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~~~-~~G~L~Dr 76 (309)
+.+.+..++++...++..|=. +++..+.--+|-+..+.+.+......|..+|- ++|++.++
T Consensus 15 ~~~~l~~~~f~sg~~~L~yEv-~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~ 76 (521)
T PRK03612 15 DRALLLAAVFVCAACGLVYEL-LLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD 76 (521)
T ss_pred hhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 334455555555555554432 23333555678777777776666666666643 66666533
No 235
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.15 E-value=0.088 Score=51.45 Aligned_cols=145 Identities=15% Similarity=0.091 Sum_probs=89.0
Q ss_pred HHHHHHHHHHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhhhh-hhhhhccccc--hHHHHHHHHHHHHHHHH
Q 021692 19 FVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSVGF-LAGSLCEVLP--IWGALLVGALQNFIGYG 95 (309)
Q Consensus 19 l~~~~l~~~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~~~-~~G~L~Dr~G--pr~vllig~~l~~~gy~ 95 (309)
+.++....+..+..+.=+.++..+.+++..+.-++++...-..+...++. +.|.+.||+| +|...+.|.++......
T Consensus 274 ~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~ 353 (464)
T KOG3764|consen 274 LIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSG 353 (464)
T ss_pred hhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhc
Confidence 33333333444445555566666777777444466665554455556654 8999999999 77777776665542211
Q ss_pred HHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CC------CCcchhhhhhhhhhhHHHHHHHHHHH
Q 021692 96 WVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KS------RGPVVGILKGFAGLGGAILTQVYTMI 168 (309)
Q Consensus 96 l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~------RG~avGi~~~~~GLg~ai~~~i~~~~ 168 (309)
..- +. .++.++.+-.+..+.+.+..++..+.+....-. +| -|.+-+|....+.+|.++.+.+....
T Consensus 354 ~iP--~~-----~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~i 426 (464)
T KOG3764|consen 354 PIP--FA-----TSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSL 426 (464)
T ss_pred hhH--hh-----hhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchh
Confidence 111 11 245566665555566677777777766666555 32 37888888888888888776665544
Q ss_pred cc
Q 021692 169 HA 170 (309)
Q Consensus 169 ~~ 170 (309)
.+
T Consensus 427 v~ 428 (464)
T KOG3764|consen 427 VE 428 (464)
T ss_pred ee
Confidence 33
No 236
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=95.12 E-value=3.6 Score=41.29 Aligned_cols=127 Identities=12% Similarity=0.032 Sum_probs=73.3
Q ss_pred hhhhhhhccccch-HHHHHHHHHHHHHHHHHHHHHHh--C----------CCCChh---HHHHHHHHHHHHhchhhhhhh
Q 021692 67 GFLAGSLCEVLPI-WGALLVGALQNFIGYGWVWLIVT--G----------RAPVLP---LWAMCILIFVGNNGETYFNTA 130 (309)
Q Consensus 67 ~~~~G~L~Dr~Gp-r~vllig~~l~~~gy~l~~l~~~--~----------~i~~~s---~~~l~~~~~l~g~g~~~~~~~ 130 (309)
+.+--++.+|+|+ |++-.++.++.+++.....+.-. + .++ ++ .+...+...+.|+..+..++.
T Consensus 322 s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~Gi~~A~~~si 400 (477)
T TIGR01301 322 SIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLP-PPTGIKASALIVFAILGIPLAITYSI 400 (477)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccC-cchhhHHHHHHHHHHhhHHHHHHHHH
Confidence 3345667899986 56668887777777666653221 0 011 11 244444555667777777888
Q ss_pred HHHHHhhhcC---CCCCcchhhhhhhhhhhHHHHHHH---HHHHccCChHHHHHHHHHHHHHHHHHHHhhc
Q 021692 131 ALVSCVQNFP---KSRGPVVGILKGFAGLGGAILTQV---YTMIHAPDHANLIFMVAVGPAMVVIALMFII 195 (309)
Q Consensus 131 ~~~~~~~~FP---~~RG~avGi~~~~~GLg~ai~~~i---~~~~~~~~~~~~~l~la~~~~~v~l~~~~~i 195 (309)
....+.+.-| ++.|.-+|+...+.-+...+.+.. ...+++++....+.+ |.+.++++.+...++
T Consensus 401 Pfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~-~gv~~~~aa~~~~~~ 470 (477)
T TIGR01301 401 PFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVV-GAVAAFVSGLLALIL 470 (477)
T ss_pred hHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHH-HHHHHHHHHHHHHHh
Confidence 8888888777 345999999877776555554322 233345444444434 444444444443333
No 237
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=95.07 E-value=0.23 Score=49.61 Aligned_cols=94 Identities=16% Similarity=0.172 Sum_probs=60.3
Q ss_pred hhhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCC
Q 021692 66 VGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRG 144 (309)
Q Consensus 66 ~~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG 144 (309)
.++..|.+.||+|+|..+.+......++-+.... . .+|.+.+....++ ............+..=. ++|-
T Consensus 78 ~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~--~------~~~~~~~~~l~g~--~~~~~s~~~a~vadis~~~~R~ 147 (463)
T KOG2816|consen 78 SSPLIGALSDRYGRKVVLLLPLFGTILPALCLLF--Q------GYWFFLLLGLSGG--FSAIFSVGFAYVADISSEEERS 147 (463)
T ss_pred HHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHH--H------HHHHhhhcccccc--hhhhhhhhhhheeeccchhHHH
Confidence 3668999999999999999998877766554422 2 2444332222222 22222333444445555 5799
Q ss_pred cchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 145 PVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 145 ~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
...|++.+..+++..+.+.+.....
T Consensus 148 ~~~gll~~~~~~~~~~~p~~~~~~~ 172 (463)
T KOG2816|consen 148 SSIGLLSGTFGAGLVIGPALGGYLV 172 (463)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 9999999988888887776655443
No 238
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=95.04 E-value=0.1 Score=52.06 Aligned_cols=120 Identities=20% Similarity=0.251 Sum_probs=86.7
Q ss_pred HHHhhCCCHHHHHHHHHHHHHHhhh-hh-hhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHH
Q 021692 42 IKSSLNYNQKQIARLGVAKDLGDSV-GF-LAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFV 119 (309)
Q Consensus 42 l~~~lg~s~~~~~~i~~~~~vg~~~-~~-~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l 119 (309)
++..++|+..+.+............ .. ..+.+...+|-|+++..|.+.-.++..++++. +..|+++....+
T Consensus 268 l~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~-------~~~w~~~~~~v~ 340 (463)
T KOG2816|consen 268 LKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFA-------TETWMMFAAGVV 340 (463)
T ss_pred EeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHh-------ccchhhhHHHHH
Confidence 6888999999998655444444444 33 45688889999999999999998888777653 246777665554
Q ss_pred HHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 120 GNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 120 ~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
.+ ......++.-....++-+ ++||.+.++.....++++.+.+.++..++
T Consensus 341 ~~-~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 341 VA-LAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred HH-hhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 43 334444555556666665 78999999999888888888877776654
No 239
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.98 E-value=0.59 Score=45.92 Aligned_cols=153 Identities=10% Similarity=0.053 Sum_probs=83.2
Q ss_pred hHHHHHHh-hCCCHHHHHHHHHHHHHHhhh--hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHH
Q 021692 38 ISPVIKSS-LNYNQKQIARLGVAKDLGDSV--GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMC 114 (309)
Q Consensus 38 ys~~l~~~-lg~s~~~~~~i~~~~~vg~~~--~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~ 114 (309)
..|.+.+. .|++..|++.-......-.++ -++...+.|..|.|++++++++...+.+.++-+ .. +++.+-
T Consensus 26 l~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~--~~-----sv~~mq 98 (412)
T PF01770_consen 26 LTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLF--GT-----SVLAMQ 98 (412)
T ss_pred chHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH--HC-----cHHHHH
Confidence 44667665 899999997643333333333 348999999999999999999988877766432 22 466655
Q ss_pred HHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhh---hHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHH
Q 021692 115 ILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGL---GGAILTQVYTMIHAPDHANLIFMVAVGPAMVVIA 190 (309)
Q Consensus 115 ~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GL---g~ai~~~i~~~~~~~~~~~~~l~la~~~~~v~l~ 190 (309)
+..+.-|.+.+. ..+....+-.--| ++--.+++..++..=+ .+.+.+|+...+ ++..-..+..+.+....++++
T Consensus 99 ~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~-~~~sy~~L~~isl~~~~~a~~ 176 (412)
T PF01770_consen 99 LMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSF-GGVSYFQLNYISLASVSLALL 176 (412)
T ss_pred HHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHH
Confidence 544443332221 2222233333334 3333445554444422 233344443332 222222222344444455666
Q ss_pred HHhhcccCC
Q 021692 191 LMFIIRPVG 199 (309)
Q Consensus 191 ~~~~ir~~p 199 (309)
..+++..|+
T Consensus 177 ~~~fLP~~~ 185 (412)
T PF01770_consen 177 IALFLPMPK 185 (412)
T ss_pred HHHHcCCCC
Confidence 666766544
No 240
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=94.90 E-value=0.25 Score=51.18 Aligned_cols=68 Identities=9% Similarity=0.036 Sum_probs=47.7
Q ss_pred hhhhhhHHhhHHH-HHHhhCCCHHHHHHHHHHHHH-Hhhh-hhhhhhhccccc--hHHHHHHHHHHHHHHHHH
Q 021692 29 AGIGYLFGSISPV-IKSSLNYNQKQIARLGVAKDL-GDSV-GFLAGSLCEVLP--IWGALLVGALQNFIGYGW 96 (309)
Q Consensus 29 ~g~~Y~fsvys~~-l~~~lg~s~~~~~~i~~~~~v-g~~~-~~~~G~L~Dr~G--pr~vllig~~l~~~gy~l 96 (309)
.+..+.+..|.|. +++.+|++..+.+.+.....+ +..+ .+++|++.||++ .|+.+.++.++..++..+
T Consensus 343 ~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 343 SLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 3445556666654 577899999999887665444 4445 458999999998 567777777766666443
No 241
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=94.00 E-value=0.29 Score=49.54 Aligned_cols=103 Identities=17% Similarity=0.212 Sum_probs=72.5
Q ss_pred HHHHHHHhhhhh-hhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHH
Q 021692 57 GVAKDLGDSVGF-LAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSC 135 (309)
Q Consensus 57 ~~~~~vg~~~~~-~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~ 135 (309)
+.....|..+.. +.+++..++|.-+++.+|.+++.+=+..++.. .+.|.+.-.-.+-|...+..+.++...+
T Consensus 412 ~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L-------~n~W~vLPieilqgit~aliWaa~~sY~ 484 (618)
T KOG3762|consen 412 SALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL-------QNPWMVLPIEILQGITHALIWAAIISYA 484 (618)
T ss_pred hhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh-------cCchheeeHHHHHHHHHHHHHHHHHHHH
Confidence 333334444433 78999999999999999998888666544332 2578777777777777778888888888
Q ss_pred hhhcCC-CCCcchhhhhh-hhhh----hHHHHHHHHH
Q 021692 136 VQNFPK-SRGPVVGILKG-FAGL----GGAILTQVYT 166 (309)
Q Consensus 136 ~~~FP~-~RG~avGi~~~-~~GL----g~ai~~~i~~ 166 (309)
...-|. -|.++-|++.+ +.|+ |+.|...+..
T Consensus 485 s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~ 521 (618)
T KOG3762|consen 485 SHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVE 521 (618)
T ss_pred HhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhe
Confidence 999994 59999999754 4444 4544444433
No 242
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=93.81 E-value=8.1 Score=38.76 Aligned_cols=150 Identities=9% Similarity=0.006 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHhhhhhhHHhhHHHHHHhhCCCH-----HHHHHHHHHHHHHhhh--hhhhhhhccccchHHHHHHHHH
Q 021692 16 WLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQ-----KQIARLGVAKDLGDSV--GFLAGSLCEVLPIWGALLVGAL 88 (309)
Q Consensus 16 w~~l~~~~l~~~~~g~~Y~fsvys~~l~~~lg~s~-----~~~~~i~~~~~vg~~~--~~~~G~L~Dr~Gpr~vllig~~ 88 (309)
|..+....++.+|....|. ...++|+.+..+. ..+..+-+...+...+ .++.+++++|++++++.-+-..
T Consensus 6 ~~k~~~~~l~fF~il~~Y~---iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~ 82 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYT---ILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVIS 82 (472)
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHH
Confidence 3444444455566666664 3467888887743 3455555555554443 4689999999999998766555
Q ss_pred HHHHHHHHHHHHHh---CCCC-----------Ch----------hHHHHHHHHHHHHhchhhhhh-hHHHHHhhhcC-CC
Q 021692 89 QNFIGYGWVWLIVT---GRAP-----------VL----------PLWAMCILIFVGNNGETYFNT-AALVSCVQNFP-KS 142 (309)
Q Consensus 89 l~~~gy~l~~l~~~---~~i~-----------~~----------s~~~l~~~~~l~g~g~~~~~~-~~~~~~~~~FP-~~ 142 (309)
.+..-+.+|+.... +... .+ +.|...+++...-.=...... --...+.+.+. ++
T Consensus 83 ~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~q 162 (472)
T TIGR00769 83 PFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDE 162 (472)
T ss_pred HHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 55545555544321 1110 00 134444444433221111111 22345567777 44
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHH
Q 021692 143 RGPVVGILKGFAGLGGAILTQVYTMI 168 (309)
Q Consensus 143 RG~avGi~~~~~GLg~ai~~~i~~~~ 168 (309)
-.+=-++...+..+|..+.+.+...+
T Consensus 163 akRfy~l~~~ganlg~i~sg~~~~~~ 188 (472)
T TIGR00769 163 AKRFYALFGLGANVALIFSGRTIKYF 188 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555557777777665544
No 243
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=92.64 E-value=13 Score=37.60 Aligned_cols=113 Identities=13% Similarity=0.080 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCC--CChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCC-CCCcchhhhhhhh-hhhH
Q 021692 83 LLVGALQNFIGYGWVWLIVTGRA--PVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFA-GLGG 158 (309)
Q Consensus 83 llig~~l~~~gy~l~~l~~~~~i--~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~-~RG~avGi~~~~~-GLg~ 158 (309)
..+|.++.++||..+.+.....- ...+.|.+.+.+.+.+.|--+.....+....|.-|+ .||..+|+--... .+|.
T Consensus 348 fa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~ 427 (493)
T PRK15462 348 FALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIAN 427 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 67888888899988765432111 012444455666666778778888888888999995 5999999953322 2555
Q ss_pred HHHHHHHHHHcc----C---------ChHHHHHHHHHHHHHH-HHHHHhhc
Q 021692 159 AILTQVYTMIHA----P---------DHANLIFMVAVGPAMV-VIALMFII 195 (309)
Q Consensus 159 ai~~~i~~~~~~----~---------~~~~~~l~la~~~~~v-~l~~~~~i 195 (309)
.+.+.+....-. + +...++..+++...++ +++...++
T Consensus 428 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 478 (493)
T PRK15462 428 YLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALACVGVVLMIWL 478 (493)
T ss_pred HHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555555443211 0 1235666677666555 55554444
No 244
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.97 E-value=3.9 Score=40.84 Aligned_cols=88 Identities=14% Similarity=-0.100 Sum_probs=65.1
Q ss_pred hhhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCC
Q 021692 66 VGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRG 144 (309)
Q Consensus 66 ~~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG 144 (309)
.+.+++-+.|+.|||+.+.+|+.+...=...+. . ++-|.++...++.|.|.++.+++.-....++.+ +++.
T Consensus 66 ~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl----~----~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~tie 137 (461)
T KOG3098|consen 66 SCLFAPSIVNFLGPKWALVIGATCYAAFPLGFL----F----PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETIE 137 (461)
T ss_pred HHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHH----h----cchHHHHHHHHHhhhhHHheecccceehhhcCChhhHH
Confidence 366899999999999999999976553222222 1 356677777788999999999999999999998 5588
Q ss_pred cchhhhhhhhhhhHHHH
Q 021692 145 PVVGILKGFAGLGGAIL 161 (309)
Q Consensus 145 ~avGi~~~~~GLg~ai~ 161 (309)
+-+++.-+..-.+..+.
T Consensus 138 ~Nisi~Wai~~~~li~G 154 (461)
T KOG3098|consen 138 RNISIFWAIGQSSLIIG 154 (461)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 88888666554443333
No 245
>PTZ00207 hypothetical protein; Provisional
Probab=91.93 E-value=1.1 Score=46.25 Aligned_cols=144 Identities=13% Similarity=0.090 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHhhhhhhHHhhHHHHHHhh-CC-CHHHHHH-HHHHHHHHhhhhh-hhhhhc---------cccchHHH
Q 021692 16 WLVFVAAMWIQSCAGIGYLFGSISPVIKSSL-NY-NQKQIAR-LGVAKDLGDSVGF-LAGSLC---------EVLPIWGA 82 (309)
Q Consensus 16 w~~l~~~~l~~~~~g~~Y~fsvys~~l~~~l-g~-s~~~~~~-i~~~~~vg~~~~~-~~G~L~---------Dr~Gpr~v 82 (309)
.+.+..++++...+|..+..+ ..++-+.+ |+ +..+.+. ..+...++.++|= .+|.+. ||+ ||++
T Consensus 355 ~Wll~~~~~cg~g~gl~~~~N--~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~-prt~ 431 (591)
T PTZ00207 355 LWCLLWSIFCCVGAHFVIIFN--ARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRV-PITI 431 (591)
T ss_pred HHHHHHHHHHhhCchheeeec--HHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhcccccc-chhH
Confidence 344444444445555555433 25566667 77 3232222 2222234444433 233322 233 4554
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHH
Q 021692 83 LLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILT 162 (309)
Q Consensus 83 llig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~ 162 (309)
.+.....+.++++++++... --.+++...+.|++.|...+....+..+.|-++-|+-=-+.....-+|+.++.
T Consensus 432 ~l~~~~~~~~~~lll~~~~p-------~~~L~~~~~lvg~~~G~~~~~~~~i~selFgk~~g~~yN~~~~a~pigs~~~n 504 (591)
T PTZ00207 432 ALFIPSVCIITMLTLFLTLP-------KAALPLPYFIAAFANGFMAATIALVTRTIFAKDPAKHYNFCFLGSVLSAIFLN 504 (591)
T ss_pred HHHHHHHHHHHHHHHHHHCC-------ccHhHHHHHHHHHHhhHhHHHHHHHHHHHhccchHHHhhHHhHHHHHHHHHHH
Confidence 44444446677777766422 12455566777888888887888888999997788777776666777777773
Q ss_pred -HHHHHHc
Q 021692 163 -QVYTMIH 169 (309)
Q Consensus 163 -~i~~~~~ 169 (309)
.++..++
T Consensus 505 ~~l~G~~Y 512 (591)
T PTZ00207 505 RLLYGEWY 512 (591)
T ss_pred HHHHHHHH
Confidence 3333344
No 246
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=91.12 E-value=0.058 Score=54.83 Aligned_cols=125 Identities=19% Similarity=0.130 Sum_probs=2.7
Q ss_pred hhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHH--hCC---------
Q 021692 37 SISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIV--TGR--------- 104 (309)
Q Consensus 37 vys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~--~~~--------- 104 (309)
.-.+.++++|+++.+|.+.+.+..+++..+ .++..++.+|..+-+.+-+|+++.++|.+++.+-. .+.
T Consensus 24 ~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~ 103 (539)
T PF03137_consen 24 SSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNS 103 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccc
Confidence 344689999999999999999999999877 55778888887776778888888889988876410 000
Q ss_pred ------------------------------CCCh--hHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhh
Q 021692 105 ------------------------------APVL--PLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILK 151 (309)
Q Consensus 105 ------------------------------i~~~--s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~ 151 (309)
-... .++.+.+...+.|+|.+..++-....+=+|-+ ++-+.=+|+..
T Consensus 104 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~ 183 (539)
T PF03137_consen 104 NGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILY 183 (539)
T ss_dssp ------------------------------------------------SSS-----------------------------
T ss_pred ccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhh
Confidence 0000 12333445667888888888888877778887 45666677766
Q ss_pred hhhhhhHHHH
Q 021692 152 GFAGLGGAIL 161 (309)
Q Consensus 152 ~~~GLg~ai~ 161 (309)
+...+|-++.
T Consensus 184 ~~~~lGPa~G 193 (539)
T PF03137_consen 184 AMSILGPALG 193 (539)
T ss_dssp ----------
T ss_pred HHhhccHHHH
Confidence 6665655543
No 247
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=91.06 E-value=3.3 Score=41.06 Aligned_cols=114 Identities=18% Similarity=0.193 Sum_probs=71.9
Q ss_pred HHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHH----HHHHHHHHHHhCCC-CChhHHHH
Q 021692 40 PVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNF----IGYGWVWLIVTGRA-PVLPLWAM 113 (309)
Q Consensus 40 ~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~----~gy~l~~l~~~~~i-~~~s~~~l 113 (309)
.+++++ |+|...++..=..+.+.... .+.+.++.+|+|+.+.-+++...-. ++...+| ..+.- +..+...+
T Consensus 283 ~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~--~~~~~~~~~s~~~l 359 (432)
T PF06963_consen 283 AYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFW--APGSPFSSISAYLL 359 (432)
T ss_pred HHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHh--cCCCCchhhHHHHH
Confidence 445554 99999998876666665555 4488999999999999888877433 2222222 22210 00112222
Q ss_pred HHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhh
Q 021692 114 CILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGL 156 (309)
Q Consensus 114 ~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GL 156 (309)
.....+.=.|.=.+|.+..-...++-| ++||.+.|.-.+.+.+
T Consensus 360 ~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~l 403 (432)
T PF06963_consen 360 LGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSL 403 (432)
T ss_pred HHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHH
Confidence 222222223555678888888889999 6699999987666643
No 248
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=90.84 E-value=6.9 Score=38.41 Aligned_cols=118 Identities=14% Similarity=0.235 Sum_probs=66.5
Q ss_pred hhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcch
Q 021692 68 FLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVV 147 (309)
Q Consensus 68 ~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~av 147 (309)
+.+-+..+|++.+.=..+..++..+|+++.++ . +++|.-.+..++.+.++++.-...+. ..+.||+. ++
T Consensus 77 l~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~--~-----~~v~~~l~Gv~las~ssg~GE~tfL~-lt~~y~~~---~l 145 (402)
T PF02487_consen 77 LIAPFFIHRVPYWIRILICVALSAAGMLLVAF--S-----PSVWVRLLGVVLASLSSGLGEVTFLS-LTHFYGKS---SL 145 (402)
T ss_pred HHhHhhhhhccchHHHHHHHHHHHHHHhheee--c-----cchhHHHHHHHHHhhhhhhhHHHHHH-HHHhcCcc---cc
Confidence 35677888888554444555566677766543 1 25665445566777777777655554 46778853 34
Q ss_pred hhhhhhhhhhHHHHHHHHHHHc--cCChHHHHHHHHHHHHHHHHHHHhhcc
Q 021692 148 GILKGFAGLGGAILTQVYTMIH--APDHANLIFMVAVGPAMVVIALMFIIR 196 (309)
Q Consensus 148 Gi~~~~~GLg~ai~~~i~~~~~--~~~~~~~~l~la~~~~~v~l~~~~~ir 196 (309)
+--.++.|.++.+.+..+..+- +-.++..++....+|++..+.-.+.++
T Consensus 146 ~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~ 196 (402)
T PF02487_consen 146 SAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLP 196 (402)
T ss_pred ccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4445566666666655554332 334555555555555443333333444
No 249
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=90.66 E-value=2.1 Score=42.61 Aligned_cols=159 Identities=14% Similarity=0.134 Sum_probs=81.0
Q ss_pred hhhhhhccchHHHHHHHHHHHHHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHH-HH
Q 021692 6 ERFVSFFNNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWG-AL 83 (309)
Q Consensus 6 ~~~k~~~~~rw~~l~~~~l~~~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~-vl 83 (309)
..+++..++|-+.+..- .-.+..|..|..+.........-||++...+.+.....++..+ +..+|.+.||..--+ ++
T Consensus 257 ~si~~~~~n~~F~il~~-~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~ 335 (480)
T KOG2563|consen 257 KSIKSCFKNRQFIILAI-CYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTT 335 (480)
T ss_pred HHHHHHHcCccHHHHHH-HHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHH
Confidence 34455555554433221 1123345566666665533445688887788887777777766 669999999987644 44
Q ss_pred HHHHHHHHHH-HHHHHHHHhCCCCChhHHHHHHHHHHHH-hchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHH
Q 021692 84 LVGALQNFIG-YGWVWLIVTGRAPVLPLWAMCILIFVGN-NGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAIL 161 (309)
Q Consensus 84 lig~~l~~~g-y~l~~l~~~~~i~~~s~~~l~~~~~l~g-~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~ 161 (309)
++-......+ ..+... +... . ..+.++.-..+.| .+.+..=...=...---||..-|+-.|++.....+=+.++
T Consensus 336 ~v~~~~~~v~~~~l~~~--t~~~-~-~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~ 411 (480)
T KOG2563|consen 336 LVLYLFALVGTLMLLTC--TLFL-G-DSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVIL 411 (480)
T ss_pred HHHHHHHHHHHHHHHHh--hccC-C-ceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHH
Confidence 4444443344 222222 2211 1 2233333332322 2222221111122335789887888888655444444444
Q ss_pred HHHHHHHc
Q 021692 162 TQVYTMIH 169 (309)
Q Consensus 162 ~~i~~~~~ 169 (309)
..+.....
T Consensus 412 ~~~~~~~~ 419 (480)
T KOG2563|consen 412 VFIMGILA 419 (480)
T ss_pred HHHHHHHh
Confidence 44444433
No 250
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=89.55 E-value=8.7 Score=38.82 Aligned_cols=84 Identities=18% Similarity=0.303 Sum_probs=58.2
Q ss_pred HHhhhhhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCC
Q 021692 62 LGDSVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK 141 (309)
Q Consensus 62 vg~~~~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~ 141 (309)
+|....+.+|++-.+..++--+.++.....-|-.++....++ +.|..++.+.+.+....+..|.+..-++++-.+
T Consensus 310 lga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~-----~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~ 384 (511)
T TIGR00806 310 LGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSH-----DIWVLYVTYVLFRGIYQFLVPIATFQIASSLSK 384 (511)
T ss_pred HHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhccc-----chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 344446678888777766555666665555444444443333 689998888777767777888888888899996
Q ss_pred CC-Ccchhhh
Q 021692 142 SR-GPVVGIL 150 (309)
Q Consensus 142 ~R-G~avGi~ 150 (309)
+| |++.|+.
T Consensus 385 ~~~aLvFGiN 394 (511)
T TIGR00806 385 ELCALVFGIN 394 (511)
T ss_pred cceEEEEecH
Confidence 65 9998883
No 251
>PRK13387 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Provisional
Probab=87.81 E-value=23 Score=33.57 Aligned_cols=58 Identities=16% Similarity=-0.028 Sum_probs=27.6
Q ss_pred ccchHHHHHHHHHHHHHHHH-HHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcc
Q 021692 76 VLPIWGALLVGALQNFIGYG-WVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPV 146 (309)
Q Consensus 76 r~Gpr~vllig~~l~~~gy~-l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~a 146 (309)
+..||.+...+..+..++.. ..++.... +++.+ ..++.+...++.|+. .-|| ++||.+
T Consensus 84 ~ls~~~v~~~~~~~~~ia~~~Gl~L~~~~-----g~~~l--~igl~g~~~~~~Yt~------gP~~l~y~gLG 143 (317)
T PRK13387 84 GLKPRNVLTVILLMYVVAAILGVYLCMNT-----SWLLL--VIGLICFAIGILYTG------GPLPLSRMPLG 143 (317)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHh-----cHHHH--HHHHHHHHHhhhhcC------CCcccccCccH
Confidence 34567776666666554332 22333222 22222 222334344555543 4567 778865
No 252
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=86.83 E-value=30 Score=33.14 Aligned_cols=34 Identities=24% Similarity=0.251 Sum_probs=19.4
Q ss_pred HHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHc
Q 021692 134 SCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (309)
Q Consensus 134 ~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~ 169 (309)
+..|.+=+++.... ..+..|+-+.+...+....+
T Consensus 185 V~~E~~v~~~~~~~--~lg~~Glfg~ii~~iq~~il 218 (334)
T PF06027_consen 185 VLEEKLVKKAPRVE--FLGMLGLFGFIISGIQLAIL 218 (334)
T ss_pred HHHHHhcccCCHHH--HHHHHHHHHHHHHHHHHHhe
Confidence 35566665554433 23667776677665555545
No 253
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=86.44 E-value=26 Score=32.06 Aligned_cols=36 Identities=19% Similarity=0.235 Sum_probs=22.8
Q ss_pred HHHHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHHH
Q 021692 131 ALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTM 167 (309)
Q Consensus 131 ~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~ 167 (309)
.+-..+|..| +|....+++.++.++|.-+.-++...
T Consensus 53 ~~~~~~k~lP-rk~~~~~~l~gg~~~~~y~l~~~~~n 88 (249)
T PF10225_consen 53 LLFQLSKLLP-RKSMFYAVLYGGWSFGLYFLQQLWEN 88 (249)
T ss_pred HHHHHHHHcc-CcchhHHHHhhhhHHHHHHHHHHHHH
Confidence 3344679999 66666666666666766666555443
No 254
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=86.34 E-value=12 Score=36.88 Aligned_cols=130 Identities=15% Similarity=0.098 Sum_probs=72.9
Q ss_pred HHhhCCCHHHHHHHHHHHHHHhh-hhhhhhhhccccc--hHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHH
Q 021692 43 KSSLNYNQKQIARLGVAKDLGDS-VGFLAGSLCEVLP--IWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFV 119 (309)
Q Consensus 43 ~~~lg~s~~~~~~i~~~~~vg~~-~~~~~G~L~Dr~G--pr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l 119 (309)
...+|++..|.+.+.....+++. +....+...||.. -+.++..+..++.-.+.+.. ..+. ...+.+...+
T Consensus 289 ~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls---~~~~----~~~l~~~s~l 361 (451)
T KOG2615|consen 289 HGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLS---LART----PVVLYLGSTL 361 (451)
T ss_pred cCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHh---cccc----chhhhHHHHH
Confidence 35799999999877554444443 4666677778777 66666666665543333322 2221 1222222223
Q ss_pred HHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhhhHHHHHHHHHHHc---cCChHHHHHH
Q 021692 120 GNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH---APDHANLIFM 179 (309)
Q Consensus 120 ~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i~~~~~---~~~~~~~~l~ 179 (309)
-....+..-|.......+.-| +.||++.|+..+-..++=++.+.+-...+ ..++..|+..
T Consensus 362 ~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~~ 425 (451)
T KOG2615|consen 362 KSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIAW 425 (451)
T ss_pred HHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeeeh
Confidence 232333333333334446667 66999999988877777777665542333 3344445433
No 255
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=85.37 E-value=26 Score=34.60 Aligned_cols=137 Identities=17% Similarity=0.203 Sum_probs=78.3
Q ss_pred hhhhhccchHHHHHHHHHHHHHhhhhhhHHhhHHHHHHhhCCCHH-H--HHHHHHHHHHHh-hhhhhhhhhccccchHHH
Q 021692 7 RFVSFFNNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQK-Q--IARLGVAKDLGD-SVGFLAGSLCEVLPIWGA 82 (309)
Q Consensus 7 ~~k~~~~~rw~~l~~~~l~~~~~g~~Y~fsvys~~l~~~lg~s~~-~--~~~i~~~~~vg~-~~~~~~G~L~Dr~Gpr~v 82 (309)
.+|+..+++ ..+..++|=.+.....+-..-|...|=++..-++. + =+.+-....+.+ ..+...|.+-.++.++.-
T Consensus 239 ~~~~~y~~~-~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~ 317 (412)
T PF01770_consen 239 DFKSCYSNP-RLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGE 317 (412)
T ss_pred HHHHHhcCc-hHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHH
Confidence 344444444 34444555443333344444555555333311111 1 123333333333 446688998888888877
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhh
Q 021692 83 LLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGI 149 (309)
Q Consensus 83 llig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi 149 (309)
+.++.....-|..++.....+ +.|..+..+.+.+....+..|.+..-++++.. ++-|.+.|+
T Consensus 318 l~l~~~S~l~a~~L~lm~~t~-----~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGi 380 (412)
T PF01770_consen 318 LALGVFSLLQAGLLFLMSFTG-----NIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGI 380 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeee
Confidence 777776666555555444443 68888887776665666777777777888888 446777776
No 256
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=81.92 E-value=12 Score=39.50 Aligned_cols=90 Identities=11% Similarity=0.105 Sum_probs=53.2
Q ss_pred hhhhhhhhccchHHHHHHHHHHHHHhhhhhhHHhhH-HHHHHhhCCCHHHHHHHH-HHHHHHhhhhh-hhhhhccccch-
Q 021692 4 FQERFVSFFNNRWLVFVAAMWIQSCAGIGYLFGSIS-PVIKSSLNYNQKQIARLG-VAKDLGDSVGF-LAGSLCEVLPI- 79 (309)
Q Consensus 4 ~~~~~k~~~~~rw~~l~~~~l~~~~~g~~Y~fsvys-~~l~~~lg~s~~~~~~i~-~~~~vg~~~~~-~~G~L~Dr~Gp- 79 (309)
+...+|+.++|.-.++..-..+. -....-.+.+|. ++|.++||.++++++.+. .+..-+..+|+ ++|++..|+-.
T Consensus 381 fp~s~~~ll~N~if~~~~l~~~~-~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 381 FPKSIKRLLSNPIFMLVVLASVI-ESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred HHHHHHHHhcCchHHHHHHHHHH-HHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence 34556666666654433222221 111222344666 567889999999999875 44444556677 89999999764
Q ss_pred -HHHHHHHHHHHHHHH
Q 021692 80 -WGALLVGALQNFIGY 94 (309)
Q Consensus 80 -r~vllig~~l~~~gy 94 (309)
|....+.++...+.+
T Consensus 460 ~r~~a~~~~~~~~l~l 475 (735)
T KOG3626|consen 460 ARGAAKFVIVCSVLSL 475 (735)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 445544444444333
No 257
>PRK07419 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Provisional
Probab=81.32 E-value=39 Score=31.86 Aligned_cols=21 Identities=14% Similarity=-0.056 Sum_probs=12.7
Q ss_pred HHhchhhhhhhHHHHHhhhcC-CCCCcc
Q 021692 120 GNNGETYFNTAALVSCVQNFP-KSRGPV 146 (309)
Q Consensus 120 ~g~g~~~~~~~~~~~~~~~FP-~~RG~a 146 (309)
.|...+++|++ .-|| ++||.+
T Consensus 127 ~g~~~~~~YT~------gP~~l~y~gLG 148 (304)
T PRK07419 127 LCCFLGYLYQG------PPFRLGYQGLG 148 (304)
T ss_pred HHHHHhheccC------CCcccCCCCch
Confidence 34445666654 4467 778874
No 258
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=80.76 E-value=2.3 Score=43.32 Aligned_cols=54 Identities=22% Similarity=0.164 Sum_probs=43.7
Q ss_pred HHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhccccchHHHHHHHHHHHHHH
Q 021692 40 PVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIG 93 (309)
Q Consensus 40 ~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~Gpr~vllig~~l~~~g 93 (309)
+.+-+++|++..+.+++....-+...+ .++.|.++||+-.|+-+++|..+..+.
T Consensus 35 ~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~ 89 (618)
T KOG3762|consen 35 AVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVT 89 (618)
T ss_pred HHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHH
Confidence 334457999999999998777777777 669999999999999888888766633
No 259
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=80.14 E-value=70 Score=32.29 Aligned_cols=84 Identities=13% Similarity=0.090 Sum_probs=50.3
Q ss_pred hhhhhhhhhccchHHHHHHHHHHHHHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHH---hh--hhhhhhhhcccc
Q 021692 3 KFQERFVSFFNNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLG---DS--VGFLAGSLCEVL 77 (309)
Q Consensus 3 ~~~~~~k~~~~~rw~~l~~~~l~~~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg---~~--~~~~~G~L~Dr~ 77 (309)
|..+.+....+..|..+..-.+++.+.+..|.+ ...+|+.+=.+......+...+..+ .. +.....++.||+
T Consensus 10 ~~~~~~~pi~~~E~~k~~~l~~m~f~i~f~y~~---lR~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~ 86 (491)
T PF03219_consen 10 KLRSIFWPIHRSELKKFLPLALMFFFILFNYTI---LRDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRL 86 (491)
T ss_pred HHHHHhccccHHHHHHHHHHHHHHHHHHHHHHH---HHHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 344455555555555555555566777777764 3556766655555555555554422 22 244789999999
Q ss_pred chHHHHHHHHHH
Q 021692 78 PIWGALLVGALQ 89 (309)
Q Consensus 78 Gpr~vllig~~l 89 (309)
++.++.-+-...
T Consensus 87 s~~~lFy~~~~~ 98 (491)
T PF03219_consen 87 SREKLFYIIIIP 98 (491)
T ss_pred CHHHHHHHHHHH
Confidence 999975544433
No 260
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=71.20 E-value=76 Score=30.05 Aligned_cols=62 Identities=11% Similarity=0.070 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCC--ChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCC
Q 021692 81 GALLVGALQNFIGYGWVWLIVTGRAP--VLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKS 142 (309)
Q Consensus 81 ~vllig~~l~~~gy~l~~l~~~~~i~--~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~ 142 (309)
+++++|+++..+|+.++.++...... +.+.+.+++...+.+.|.|..-+.......+.|+++
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~ 65 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDED 65 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTT
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhccc
Confidence 56788999999999986665433211 113455666666778899988777777788999955
No 261
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=70.42 E-value=12 Score=36.94 Aligned_cols=119 Identities=18% Similarity=0.238 Sum_probs=71.3
Q ss_pred CCCHHHHHHHHHHHHHHhhhhh-hhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhC---C--CCChhHHHHHHHHHHH
Q 021692 47 NYNQKQIARLGVAKDLGDSVGF-LAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTG---R--APVLPLWAMCILIFVG 120 (309)
Q Consensus 47 g~s~~~~~~i~~~~~vg~~~~~-~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~---~--i~~~s~~~l~~~~~l~ 120 (309)
|+|+...+.+..++.++..++. +.....-+..-|++..+..+...+..+.-...+.+ . ++ .-|..+.-..+.
T Consensus 251 ~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~--d~~f~lgd~~l~ 328 (433)
T PF03092_consen 251 HFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIP--DQWFALGDTILE 328 (433)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcC--CeEEEEEhHHHH
Confidence 4888888888776767666655 45555555567777777776555433221111111 0 11 112111122233
Q ss_pred HhchhhhhhhHHHHHhhhcCC-CCCcchhhhhhhhhhhHHHHHHHHHH
Q 021692 121 NNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTM 167 (309)
Q Consensus 121 g~g~~~~~~~~~~~~~~~FP~-~RG~avGi~~~~~GLg~ai~~~i~~~ 167 (309)
.....+...+..+..+|.=|+ .-|+.-|++.+...+|..+...+-..
T Consensus 329 ~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~ 376 (433)
T PF03092_consen 329 EVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAF 376 (433)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333445556788889999995 59999999999988888777555433
No 262
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=69.03 E-value=1.2e+02 Score=30.28 Aligned_cols=158 Identities=13% Similarity=0.107 Sum_probs=77.3
Q ss_pred HHHHHhhCCCHHHHHHHHHHHHHHhhhhhhhhhhcc-----ccchHHHHH------HHHHHHHHHHHHHHHHH-hCCCCC
Q 021692 40 PVIKSSLNYNQKQIARLGVAKDLGDSVGFLAGSLCE-----VLPIWGALL------VGALQNFIGYGWVWLIV-TGRAPV 107 (309)
Q Consensus 40 ~~l~~~lg~s~~~~~~i~~~~~vg~~~~~~~G~L~D-----r~Gpr~vll------ig~~l~~~gy~l~~l~~-~~~i~~ 107 (309)
|.+-+.-|.|-++.+..+.+. --..+-++...+.| |+|||+.-+ +|.++..++|..=-..- .|. .
T Consensus 54 P~lL~ak~vSyt~~a~fS~ay-~P~sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~--~ 130 (510)
T KOG3574|consen 54 PLLLQAKGVSYTSQAIFSFAY-WPFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGG--L 130 (510)
T ss_pred HHHhcCCCcchhhhhhhhhhh-hHHHHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCC--C
Confidence 445456677776666543311 11122336778888 999998543 34433333321110000 111 1
Q ss_pred hhHHHHHHHHHHHHhchhhhhhhHHHHHh-----hhcC-CCCCcchhhhhhhhhhhHHHH-----HHHHHHHccC-----
Q 021692 108 LPLWAMCILIFVGNNGETYFNTAALVSCV-----QNFP-KSRGPVVGILKGFAGLGGAIL-----TQVYTMIHAP----- 171 (309)
Q Consensus 108 ~s~~~l~~~~~l~g~g~~~~~~~~~~~~~-----~~FP-~~RG~avGi~~~~~GLg~ai~-----~~i~~~~~~~----- 171 (309)
++...+....++..++++.-|.+.=.-.. ++-. .+..-.+|...+|+ +|..++ +-+.+.++.+
T Consensus 131 p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~Gyf-L~~~ifLaL~s~dF~N~y~rs~P~~~ 209 (510)
T KOG3574|consen 131 PNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYF-LGNVVFLALESPDFCNTYLRSIPLDQ 209 (510)
T ss_pred cchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHH-hhcceeeEecChhhhhHHHhcCcCcc
Confidence 23332222223333344443333322222 2332 33444566666666 777666 3345555422
Q ss_pred ---ChHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 021692 172 ---DHANLIFMVAVGPAMVVIALMFIIRPVGGH 201 (309)
Q Consensus 172 ---~~~~~~l~la~~~~~v~l~~~~~ir~~p~~ 201 (309)
.-+.|+.|.|.+..+...+..++-|++++.
T Consensus 210 g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~ 242 (510)
T KOG3574|consen 210 GFITLAGYLWFWGALFIVATTLVALLKKENDES 242 (510)
T ss_pred ceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchh
Confidence 247888888887766666666666665544
No 263
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=67.28 E-value=96 Score=30.37 Aligned_cols=128 Identities=16% Similarity=0.129 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHhhhhhhHHhhHHHHHHhhCCCHHHH---HHHHHHHHH-HhhhhhhhhhhccccchHHHHHHHHHHHHH
Q 021692 17 LVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQI---ARLGVAKDL-GDSVGFLAGSLCEVLPIWGALLVGALQNFI 92 (309)
Q Consensus 17 ~~l~~~~l~~~~~g~~Y~fsvys~~l~~~lg~s~~~~---~~i~~~~~v-g~~~~~~~G~L~Dr~Gpr~vllig~~l~~~ 92 (309)
..+-.++|=.+.+...|-..-|...+-++.. ++... +..-....+ |....+..|.+--++-+|.=++++.....-
T Consensus 235 ~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~-~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~ 313 (433)
T KOG3810|consen 235 RLLKWSLWWALASCGYYQVTNYTQILWKEVA-PNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQ 313 (433)
T ss_pred hhhhhHHHHHHhhchhHHHHHHHHHHHHhhC-CCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHh
Confidence 3444555544333334444445555544443 22211 111122223 333356789988887777655555545554
Q ss_pred HHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhh
Q 021692 93 GYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGIL 150 (309)
Q Consensus 93 gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~ 150 (309)
+-.+++...++ +.|..++.+.+....-.+.-+.+...++++.. ++-|++.|+.
T Consensus 314 agllf~m~~t~-----~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiN 367 (433)
T KOG3810|consen 314 AGLLFIMAQTQ-----HIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGIN 367 (433)
T ss_pred hhhhhhhhccc-----ceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehH
Confidence 55566666555 35665555555443344455566667778888 5678888883
No 264
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=64.06 E-value=36 Score=34.33 Aligned_cols=166 Identities=14% Similarity=0.126 Sum_probs=87.1
Q ss_pred HhhHHHHHHhhCCCHHHHHHHHHHH-HHHh----hhhhhhhhhc-cccchHHHHHHHHHHHHHHHHHHHHH---HhCCC-
Q 021692 36 GSISPVIKSSLNYNQKQIARLGVAK-DLGD----SVGFLAGSLC-EVLPIWGALLVGALQNFIGYGWVWLI---VTGRA- 105 (309)
Q Consensus 36 svys~~l~~~lg~s~~~~~~i~~~~-~vg~----~~~~~~G~L~-Dr~Gpr~vllig~~l~~~gy~l~~l~---~~~~i- 105 (309)
+.+++.....++|+.++.-...... .+.. .+-...++.. -++.+|+.++.|....+..+..+-.. ..+..
T Consensus 283 t~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~ 362 (488)
T KOG2325|consen 283 TLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPVQ 362 (488)
T ss_pred hccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeehHHHHHHhhheeeeeccccccccc
Confidence 3444555677899888764432111 1111 1112222222 33455777777765555444433110 01000
Q ss_pred --------------------CChhHHHHHH-HHHHHHhchhhhhhhHHHHHhhhc-CCCCCcchhhhhhhhhhhHHHHHH
Q 021692 106 --------------------PVLPLWAMCI-LIFVGNNGETYFNTAALVSCVQNF-PKSRGPVVGILKGFAGLGGAILTQ 163 (309)
Q Consensus 106 --------------------~~~s~~~l~~-~~~l~g~g~~~~~~~~~~~~~~~F-P~~RG~avGi~~~~~GLg~ai~~~ 163 (309)
+..+.+.+.+ +..+.|.+..+.+++..+.-+|.. |+++|++.|++......+-.+.+-
T Consensus 363 ~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~ 442 (488)
T KOG2325|consen 363 PYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPI 442 (488)
T ss_pred cccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHH
Confidence 0112232222 334566667778888888888999 589999999987777666655544
Q ss_pred HHHHHccC-Ch-HHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 021692 164 VYTMIHAP-DH-ANLIFMVAVGPAMVVIALMFIIRPVGGH 201 (309)
Q Consensus 164 i~~~~~~~-~~-~~~~l~la~~~~~v~l~~~~~ir~~p~~ 201 (309)
+....+.. ++ ..+.+..+.+..++.+....+.|..|.+
T Consensus 443 ~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~~~~~r~~~~~ 482 (488)
T KOG2325|consen 443 FSTAIFTLSGPRPVWIILLCLLLVVAALWIVFLKRLVPLK 482 (488)
T ss_pred HHhhhHHhcCccHHHHHHHHHHHHHHHHHHHHHHhcccce
Confidence 44444422 22 2223333344444455556677766654
No 265
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=63.59 E-value=16 Score=30.93 Aligned_cols=78 Identities=13% Similarity=0.178 Sum_probs=40.5
Q ss_pred hhhccccchHHHHHHHHHHHH--HHHHHHHHHHhCCCCChhHHHHHH-HHHHHHhchhhhhhhHHHHHhhhcCCCCCcch
Q 021692 71 GSLCEVLPIWGALLVGALQNF--IGYGWVWLIVTGRAPVLPLWAMCI-LIFVGNNGETYFNTAALVSCVQNFPKSRGPVV 147 (309)
Q Consensus 71 G~L~Dr~Gpr~vllig~~l~~--~gy~l~~l~~~~~i~~~s~~~l~~-~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~av 147 (309)
=.+.||.-+|.....|.=... ..+.++++.....+...+.|..++ ..++.|.| ..-...-...++|=|++.|...
T Consensus 55 ~~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~g--llGisYGilSaSWD~~r~GSll 132 (153)
T PF11947_consen 55 EVVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLG--LLGISYGILSASWDPEREGSLL 132 (153)
T ss_pred HHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHH--HHhhhhhhcccccCCCCCCCcc
Confidence 355778777777666654433 344445555444422123343332 22222222 2211222445688889999988
Q ss_pred hhh
Q 021692 148 GIL 150 (309)
Q Consensus 148 Gi~ 150 (309)
|+-
T Consensus 133 G~~ 135 (153)
T PF11947_consen 133 GWE 135 (153)
T ss_pred cHH
Confidence 873
No 266
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=62.38 E-value=77 Score=32.30 Aligned_cols=58 Identities=14% Similarity=0.123 Sum_probs=38.1
Q ss_pred CCCCcc-----hhhhhhhhhhhHHHHHH-----HHHHHccC--------ChHHHHHHHHHHHHHHHHHHHhhcccCC
Q 021692 141 KSRGPV-----VGILKGFAGLGGAILTQ-----VYTMIHAP--------DHANLIFMVAVGPAMVVIALMFIIRPVG 199 (309)
Q Consensus 141 ~~RG~a-----vGi~~~~~GLg~ai~~~-----i~~~~~~~--------~~~~~~l~la~~~~~v~l~~~~~ir~~p 199 (309)
+++|.| +|...+|+ +|-.+|-. +.+.++.. .-+.|+.|.|++.+++.+...++-|+.|
T Consensus 150 ~n~~~ASTcqtvG~~~Gyf-ls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~ 225 (544)
T PF13000_consen 150 ENVGYASTCQTVGQTAGYF-LSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKP 225 (544)
T ss_pred hhcchHHHHHHhHhhhhHH-HHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeeccc
Confidence 455554 56666666 66666633 33444421 2578999999999888887778777755
No 267
>TIGR00751 menA 1,4-dihydroxy-2-naphthoate octaprenyltransferase. This membrane-associated enzyme converts 1,4-dihydroxy-2-naphthoic acid (DHNA) to demethylmenaquinone, a step in menaquinone biosynthesis.
Probab=62.31 E-value=1.3e+02 Score=27.88 Aligned_cols=16 Identities=0% Similarity=-0.294 Sum_probs=9.9
Q ss_pred ccchHHHHHHHHHHHH
Q 021692 76 VLPIWGALLVGALQNF 91 (309)
Q Consensus 76 r~Gpr~vllig~~l~~ 91 (309)
+..||.+...+.++..
T Consensus 73 ~is~~~v~~~~~~~~~ 88 (284)
T TIGR00751 73 LITPREVKTALITSVA 88 (284)
T ss_pred CCCHHHHHHHHHHHHH
Confidence 4567777666655544
No 268
>TIGR02235 menA_cyano-plnt 1,4-dihydroxy-2-naphthoate phytyltransferase. This family of phytyltransferases, found in plants and cyanobacteria, are involved in the biosythesis of phylloquinone (Vitamin K1). Phylloquinone is a critical component of photosystem I. The closely related MenA enzyme from bacteria transfers a prenyl group (which only differs in the saturation of the isoprenyl groups) in the biosynthesis of menaquinone. Activity towards both substrates in certain organisms should be considered a possibility.
Probab=62.27 E-value=1.3e+02 Score=27.88 Aligned_cols=21 Identities=14% Similarity=-0.056 Sum_probs=12.6
Q ss_pred HHhchhhhhhhHHHHHhhhcC-CCCCcc
Q 021692 120 GNNGETYFNTAALVSCVQNFP-KSRGPV 146 (309)
Q Consensus 120 ~g~g~~~~~~~~~~~~~~~FP-~~RG~a 146 (309)
.|...++.|++ .-|| ++||.+
T Consensus 114 ~g~~~~~~Yt~------gP~~l~y~gLG 135 (285)
T TIGR02235 114 LCCFLGYLYQG------PPFRLGYQGLG 135 (285)
T ss_pred HHHHHHHhhcC------CCcccCCCCcc
Confidence 34455666653 4567 778875
No 269
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=61.78 E-value=68 Score=24.27 Aligned_cols=17 Identities=29% Similarity=0.438 Sum_probs=8.3
Q ss_pred hhhhhccccchHHHHHH
Q 021692 69 LAGSLCEVLPIWGALLV 85 (309)
Q Consensus 69 ~~G~L~Dr~Gpr~vlli 85 (309)
..|.+.|+.|.+....+
T Consensus 106 ~~~~~~~~~~~~~~~~~ 122 (141)
T TIGR00880 106 LGGVLAQFLGWRAPFLF 122 (141)
T ss_pred hHHHHhcccchHHHHHH
Confidence 45555555554444333
No 270
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=61.59 E-value=89 Score=30.92 Aligned_cols=50 Identities=14% Similarity=0.220 Sum_probs=29.2
Q ss_pred hHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCCCCcchhhhhhhhhhhHHHHH
Q 021692 109 PLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILT 162 (309)
Q Consensus 109 s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~RG~avGi~~~~~GLg~ai~~ 162 (309)
.++..+...++.|.+.+....... ..+..||++ -++...++.|+++.+.+
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~-gla~~fp~~---~~~a~~~G~g~aGv~~s 154 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLF-GLAGVFPST---YSSAVMSGQGLAGVLTS 154 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccch-hhcccCCHH---HHHHHHhcchhHHHHHH
Confidence 456666666677777776664444 567899954 12333355556655543
No 271
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=57.97 E-value=42 Score=35.60 Aligned_cols=123 Identities=16% Similarity=0.051 Sum_probs=83.2
Q ss_pred HHHHHHhhCCCHHHHHHHHHHHHHHhhhhh-hhhhhccccchHHHHHHHHHHHHHHHHHHHHHH-----------h----
Q 021692 39 SPVIKSSLNYNQKQIARLGVAKDLGDSVGF-LAGSLCEVLPIWGALLVGALQNFIGYGWVWLIV-----------T---- 102 (309)
Q Consensus 39 s~~l~~~lg~s~~~~~~i~~~~~vg~~~~~-~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~-----------~---- 102 (309)
-..+.++++++.++.+.+....+++..+.+ +..+..-|.-+-+.+-+|.+++++|-+++.+-. .
T Consensus 120 IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~ 199 (735)
T KOG3626|consen 120 ITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQS 199 (735)
T ss_pred hhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhcc
Confidence 367788999999999999998999987754 778888888888888899999988888876420 0
Q ss_pred --CC---------------------------CCChhHHH-HHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhh
Q 021692 103 --GR---------------------------APVLPLWA-MCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILK 151 (309)
Q Consensus 103 --~~---------------------------i~~~s~~~-l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~ 151 (309)
.. .....+|. +++...+.|+|.+..++--+..+=+|-- ++-..=.|++.
T Consensus 200 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~ 279 (735)
T KOG3626|consen 200 VENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILY 279 (735)
T ss_pred ccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHH
Confidence 00 00111443 3445678899988887766655555555 33555566655
Q ss_pred hhhhhhHHHH
Q 021692 152 GFAGLGGAIL 161 (309)
Q Consensus 152 ~~~GLg~ai~ 161 (309)
+..-+|-++.
T Consensus 280 ~~~~lGPaiG 289 (735)
T KOG3626|consen 280 SMAILGPAIG 289 (735)
T ss_pred HHHHhhhHHH
Confidence 5544554443
No 272
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=56.40 E-value=2.1e+02 Score=28.24 Aligned_cols=83 Identities=14% Similarity=0.179 Sum_probs=41.7
Q ss_pred hhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCC-C-CCcchhhhhhhhhhhHHHHHHHHHHHccCCh--HHHHHHHHHH
Q 021692 108 LPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-S-RGPVVGILKGFAGLGGAILTQVYTMIHAPDH--ANLIFMVAVG 183 (309)
Q Consensus 108 ~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~-~-RG~avGi~~~~~GLg~ai~~~i~~~~~~~~~--~~~~l~la~~ 183 (309)
..++..+...++.+.+.+....+ +--...-||. . .+...|- +..|.=.++..-+..+.+++.+ +..++..+.+
T Consensus 115 ~ff~vt~~~vv~~~~a~a~~qgs-~~G~a~~~P~~ytqavm~G~--a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~~ 191 (406)
T KOG1479|consen 115 GFFLVTLIIVVLLNLANAVVQGS-LYGLAGLFPSEYTQAVMSGQ--ALAGTLTSLLRILTKAAFSDSRTSALIYFITSTV 191 (406)
T ss_pred hhHHHHHHHHHHHhhhhhhhccc-hhhhhhcCCHHHHHHHHhcc--hhHhHHHHHHHHHHHHhcCCCCceeehhHHHHHH
Confidence 35666666666666666655433 3346688994 4 5555444 2222222233333444554422 2222344555
Q ss_pred HHHHHHHHHh
Q 021692 184 PAMVVIALMF 193 (309)
Q Consensus 184 ~~~v~l~~~~ 193 (309)
..++|+++..
T Consensus 192 ~~llC~i~y~ 201 (406)
T KOG1479|consen 192 ILLLCFVLYL 201 (406)
T ss_pred HHHHHHHHHH
Confidence 5666766654
No 273
>COG2119 Predicted membrane protein [Function unknown]
Probab=53.67 E-value=62 Score=28.38 Aligned_cols=30 Identities=20% Similarity=0.273 Sum_probs=22.7
Q ss_pred hhhhhccccchHHHHHHHHHHHH-HHHHHHH
Q 021692 69 LAGSLCEVLPIWGALLVGALQNF-IGYGWVW 98 (309)
Q Consensus 69 ~~G~L~Dr~Gpr~vllig~~l~~-~gy~l~~ 98 (309)
.+.++.+|+++|.+-.++++++. .|...+|
T Consensus 153 ~G~~ia~ki~~r~l~~~aallFl~fal~~~~ 183 (190)
T COG2119 153 LGKLIAGKLPERLLRFIAALLFLIFALVLLW 183 (190)
T ss_pred HHHHHHccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 57788999999999988887766 5543333
No 274
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=53.51 E-value=72 Score=31.40 Aligned_cols=104 Identities=13% Similarity=0.102 Sum_probs=57.2
Q ss_pred HHHHHHHHHhhhhhhhhhhccccchHHHHHHHHHHHH-HHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHH
Q 021692 55 RLGVAKDLGDSVGFLAGSLCEVLPIWGALLVGALQNF-IGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALV 133 (309)
Q Consensus 55 ~i~~~~~vg~~~~~~~G~L~Dr~Gpr~vllig~~l~~-~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~ 133 (309)
+-.....+|..++=-+..+ +.-|++-+...+... +...++-. .-.-+ ++.|.+++..+.-|+..|..|.-...
T Consensus 285 ~Y~~~YQ~GVFISRSS~~~---~rir~lwils~LQ~~nl~~~~l~s-~~~fi--psi~ivf~lif~eGLlGGa~YVNtF~ 358 (402)
T PF02487_consen 285 WYQLLYQLGVFISRSSLPF---FRIRRLWILSLLQVINLVFLLLQS-WYRFI--PSIWIVFVLIFYEGLLGGASYVNTFY 358 (402)
T ss_pred HHHHHHHHHHhhhhcceee---eehhhHHHHHHHHHHHHHHHHHHH-HHHHh--hHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 3344444554443222222 223566666555554 33222211 11112 36787776666656555555545555
Q ss_pred HHhhhcC-CCCCcchhhhhhhhhhhHHHHHHH
Q 021692 134 SCVQNFP-KSRGPVVGILKGFAGLGGAILTQV 164 (309)
Q Consensus 134 ~~~~~FP-~~RG~avGi~~~~~GLg~ai~~~i 164 (309)
.+.+..| ++|..++|.....-++|-.+.+.+
T Consensus 359 ~I~~~~~~~~REFslg~vsvsds~GI~lAgll 390 (402)
T PF02487_consen 359 RISEEVPPEDREFSLGAVSVSDSLGILLAGLL 390 (402)
T ss_pred HHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 6677787 789999999877776766555443
No 275
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=50.02 E-value=1e+02 Score=29.39 Aligned_cols=166 Identities=10% Similarity=-0.051 Sum_probs=0.0
Q ss_pred hhcCCCCCcchhhhhhhhhhhHHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCcchh
Q 021692 137 QNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAP---DHANLIFMVAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFT 213 (309)
Q Consensus 137 ~~FP~~RG~avGi~~~~~GLg~ai~~~i~~~~~~~---~~~~~~l~la~~~~~v~l~~~~~ir~~p~~~~~~~~~~~~f~ 213 (309)
++|+++.....+-+.-+..+-..+|..+......+ +.........+...+..+++..+.|......+++..-.-...
T Consensus 23 ~~l~~~~~~~ls~lv~~~~lP~liF~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (385)
T PF03547_consen 23 GILDPEASKGLSKLVFNVFLPALIFSSIANTDTLEDLLSLWFIPVFAFIIFILGLLLGFLLSRLFRLPKEWRGVFVLAAS 102 (385)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccceEEEeccc
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhccCchhHHHHHHHHHHHHHHHhHHHhhhhcccccCCCccccc----ccCCCCCCCCCC
Q 021692 214 FIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIILSFFLERTDPAEEA----LLSKPENMEPGK 289 (309)
Q Consensus 214 ~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~v~~~~~~~~~~~~~~~~~----l~~~~~~~~~~~ 289 (309)
+.....+.+.+...+..- ....+..+..+.-.++..++...+-....++.++.++++ -.++...+++|.
T Consensus 103 ~~N~~~lglpi~~~l~g~-------~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (385)
T PF03547_consen 103 FGNTGFLGLPILQALFGE-------RGVAYAIIFDVVNNIILWSLGYFLLESRSEKEDKSEEEPSSAESIDSEQEDSDEM 175 (385)
T ss_pred CCcchhhHHHHHHHHhcc-------hhhhhehHHHHhhHHHHHHHHHHhhcccccccccccccccccccccccccCCccc
Q ss_pred CCcccchhhhhccccccCCC
Q 021692 290 SNQETDEVILSEGQEEEGTT 309 (309)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~ 309 (309)
+.++.++.-.+|..+|+++.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~ 195 (385)
T PF03547_consen 176 SLDGSSPSSTEEEIDEDGSP 195 (385)
T ss_pred cCCcccccccccccccCCcc
No 276
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=48.61 E-value=4.1 Score=38.38 Aligned_cols=79 Identities=18% Similarity=0.139 Sum_probs=51.2
Q ss_pred HhhCCCHHHHHHHHHHHHHHh-hhhhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHh
Q 021692 44 SSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNN 122 (309)
Q Consensus 44 ~~lg~s~~~~~~i~~~~~vg~-~~~~~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~ 122 (309)
+.|++-..|++.+..++.-.. .+|.+.|-+.|+-|||+-. +..++.|.+-.+ +.+ ++.+-.+.+...++|+
T Consensus 65 stYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKrac----vtycitYiLsCi--TKh--SpqYkVLmVGR~LGGi 136 (454)
T KOG4332|consen 65 STYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRAC----VTYCITYILSCI--TKH--SPQYKVLMVGRVLGGI 136 (454)
T ss_pred hhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccce----eeehHHHHHHHH--hhc--CCceEEEeehhhhhhH
Confidence 456777788877655543333 4488999999999999853 445566665433 232 2456666666777877
Q ss_pred chhhhhhh
Q 021692 123 GETYFNTA 130 (309)
Q Consensus 123 g~~~~~~~ 130 (309)
..+..+.+
T Consensus 137 aTsLLFSa 144 (454)
T KOG4332|consen 137 ATSLLFSA 144 (454)
T ss_pred HHHHHHHH
Confidence 66655443
No 277
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=48.25 E-value=3.3e+02 Score=28.08 Aligned_cols=129 Identities=11% Similarity=0.033 Sum_probs=70.0
Q ss_pred ccchHHHHHHHHHHHHH-hhhhhhH-HhhHHHHHHhhCCCHHHHHHHHHHHHHHhhh-hhhhhhhcccc-chHHHHHHHH
Q 021692 12 FNNRWLVFVAAMWIQSC-AGIGYLF-GSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVL-PIWGALLVGA 87 (309)
Q Consensus 12 ~~~rw~~l~~~~l~~~~-~g~~Y~f-svys~~l~~~lg~s~~~~~~i~~~~~vg~~~-~~~~G~L~Dr~-Gpr~vllig~ 87 (309)
...+|+.....+....+ ..+.|.+ +-....+.+++|.+..++........--.++ ...+|+++|.| |+-+++.++.
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s 111 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS 111 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 44556654433333322 2333333 2233457888888876665443322222233 45899999985 7778888898
Q ss_pred HHHHHHHHHHHHHHhCC---------------CCChhHHHHHH---HHHHHHhchhhhhhhHHHHHhhhcC
Q 021692 88 LQNFIGYGWVWLIVTGR---------------APVLPLWAMCI---LIFVGNNGETYFNTAALVSCVQNFP 140 (309)
Q Consensus 88 ~l~~~gy~l~~l~~~~~---------------i~~~s~~~l~~---~~~l~g~g~~~~~~~~~~~~~~~FP 140 (309)
+...+|..+..+..... ...++-++..+ ...+.++|.+..-......-..-|+
T Consensus 112 ~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd 182 (571)
T KOG1237|consen 112 LISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFD 182 (571)
T ss_pred HHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccC
Confidence 88888866665432211 01123333322 2234555666655555555667777
No 278
>COG1292 BetT Choline-glycine betaine transporter [Cell envelope biogenesis, outer membrane]
Probab=48.05 E-value=32 Score=34.97 Aligned_cols=57 Identities=23% Similarity=0.305 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhHHHhhhhcccccCCCcccccccCCCCCCCCCCCCcccchhhhhccccc
Q 021692 246 FTVILFVLLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEGQEE 305 (309)
Q Consensus 246 ~~~~~~~ll~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (309)
+++++++++.+..- .++.+..+++ .+.+....++..++.++.++|..++-.+|.++|
T Consensus 480 F~~vll~~~~sl~k-~l~~d~~~~~--~r~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 536 (537)
T COG1292 480 FSLVLLVMMFSLIK-DLKQDYADRK--KRLEALMSPPRLRAGLRFKGDVAEPAMEEVAAE 536 (537)
T ss_pred HHHHHHHHHHHHHH-HHHhhHHhhh--hhhhhhccccchhHHHHhhhcccccchhhhhcc
Confidence 45566666555433 4444444311 122222233444555556677777777777776
No 279
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=44.11 E-value=3.6e+02 Score=27.38 Aligned_cols=129 Identities=10% Similarity=0.070 Sum_probs=69.7
Q ss_pred hhHHhhHHHHHH-h---hCCCHHHHHHHHHHHHH--Hhhhhhhhhhhccc---cchHHHHHHHHHHHHHHHHHHHHH--H
Q 021692 33 YLFGSISPVIKS-S---LNYNQKQIARLGVAKDL--GDSVGFLAGSLCEV---LPIWGALLVGALQNFIGYGWVWLI--V 101 (309)
Q Consensus 33 Y~fsvys~~l~~-~---lg~s~~~~~~i~~~~~v--g~~~~~~~G~L~Dr---~Gpr~vllig~~l~~~gy~l~~l~--~ 101 (309)
-.+++|.....+ + ++.+.++...+..+..+ +..+..+.-.+.++ -..+.-..+|..++..||+.+... .
T Consensus 305 ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~ 384 (498)
T COG3104 305 SSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIW 384 (498)
T ss_pred chHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHh
Confidence 356677755533 3 23555555444332211 11222233332222 223445777888888888877654 1
Q ss_pred hCC-CCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCC-CCcchhhhhhhhhhhHHHH
Q 021692 102 TGR-APVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKS-RGPVVGILKGFAGLGGAIL 161 (309)
Q Consensus 102 ~~~-i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~-RG~avGi~~~~~GLg~ai~ 161 (309)
.+. ....|.|.+...+.+.+.|-=+.+...+....+.=|++ .+.++|+--..+..|.++.
T Consensus 385 ~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~ 446 (498)
T COG3104 385 FGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLG 446 (498)
T ss_pred hcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhh
Confidence 221 11135666666667777777778777788888888864 6666666333333333333
No 280
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=42.20 E-value=8.4 Score=39.25 Aligned_cols=47 Identities=17% Similarity=0.231 Sum_probs=0.0
Q ss_pred hHHhhH-HHHHHhhCCCHHHHHHHHHHH-HHHhhhhh-hhhhhccccchH
Q 021692 34 LFGSIS-PVIKSSLNYNQKQIARLGVAK-DLGDSVGF-LAGSLCEVLPIW 80 (309)
Q Consensus 34 ~fsvys-~~l~~~lg~s~~~~~~i~~~~-~vg~~~~~-~~G~L~Dr~Gpr 80 (309)
.|..|. ++++++|+.++++.+.+.-.. ..+..+|. ++|++..|+..+
T Consensus 323 G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~ 372 (539)
T PF03137_consen 323 GFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLS 372 (539)
T ss_dssp --------------------------------------------------
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCc
Confidence 345566 566889999999998875333 34556666 899999998654
No 281
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=41.61 E-value=3.3e+02 Score=27.37 Aligned_cols=86 Identities=14% Similarity=0.129 Sum_probs=48.6
Q ss_pred hhhhhhhhccchHHHHHHHHHHHHHhhhhhhHHhhHHHHHHhhCCCHHHH-HHHHHHH---HHHh-hhhhhhhhhccccc
Q 021692 4 FQERFVSFFNNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQI-ARLGVAK---DLGD-SVGFLAGSLCEVLP 78 (309)
Q Consensus 4 ~~~~~k~~~~~rw~~l~~~~l~~~~~g~~Y~fsvys~~l~~~lg~s~~~~-~~i~~~~---~vg~-~~~~~~G~L~Dr~G 78 (309)
+.+.+|...++|+....+.+.+......+.....+...+++.+- |+.+- +..+.+. .+.. .+..+.+++.+|+|
T Consensus 253 ~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p-~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~G 331 (472)
T TIGR00769 253 TMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYP-SPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYG 331 (472)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34667777888877766665555333334444566666776664 44332 3332222 2222 22445699999999
Q ss_pred hHHHHHHHHHHH
Q 021692 79 IWGALLVGALQN 90 (309)
Q Consensus 79 pr~vllig~~l~ 90 (309)
=+...++-=+..
T Consensus 332 w~~~a~i~Pii~ 343 (472)
T TIGR00769 332 WLTAALITPLVM 343 (472)
T ss_pred HHHHHHHHHHHH
Confidence 877655544433
No 282
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=39.29 E-value=1.3e+02 Score=30.30 Aligned_cols=45 Identities=11% Similarity=0.209 Sum_probs=26.4
Q ss_pred hhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHhhhhh-hhhhhccc
Q 021692 32 GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSVGF-LAGSLCEV 76 (309)
Q Consensus 32 ~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~~~~~-~~G~L~Dr 76 (309)
.|.-+.+.+...+--|.+..+..........+..+|. ++|.+.||
T Consensus 264 sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~ 309 (493)
T KOG1330|consen 264 SWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDK 309 (493)
T ss_pred chhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHH
Confidence 4444455444454455555444444445556666765 78999999
No 283
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=39.13 E-value=59 Score=27.87 Aligned_cols=7 Identities=29% Similarity=0.302 Sum_probs=3.6
Q ss_pred Ccccchh
Q 021692 291 NQETDEV 297 (309)
Q Consensus 291 ~~~~~~~ 297 (309)
+.|-+|+
T Consensus 138 ~~Em~pL 144 (163)
T PF06679_consen 138 NVEMAPL 144 (163)
T ss_pred cceeccc
Confidence 3455555
No 284
>PF08566 Pam17: Mitochondrial import protein Pam17; InterPro: IPR013875 The presequence translocase-associated motor (PAM) drives the completion of preprotein translocation into the mitochondrial matrix. The Pam17 subunit is required for formation of a stable complex between cochaperones Pam16 and Pam18 and promotes the association of Pam16-Pam18 with the presequence translocase []. Mitochondria lacking Pam17 are selectively impaired in the import of matrix proteins [].
Probab=38.66 E-value=65 Score=27.90 Aligned_cols=53 Identities=15% Similarity=0.085 Sum_probs=31.0
Q ss_pred hhhhhhhhhccchHHHHHHHHHHHHH---hhhhhhHHhhHHHHHHhhCCCHHHHHH
Q 021692 3 KFQERFVSFFNNRWLVFVAAMWIQSC---AGIGYLFGSISPVIKSSLNYNQKQIAR 55 (309)
Q Consensus 3 ~~~~~~k~~~~~rw~~l~~~~l~~~~---~g~~Y~fsvys~~l~~~lg~s~~~~~~ 55 (309)
.|+++++--..+|+..++.++...+. .|..|.-+.-..+.+.-+|+++--+..
T Consensus 26 ~W~~ffkLRk~rrr~~~~~si~t~~~g~~~g~~yl~~~~~D~~~~I~GlDP~~~~g 81 (173)
T PF08566_consen 26 TWNEFFKLRKSRRRINLVSSIPTGLLGSSAGWAYLSTIEIDPTQQIMGLDPFMVYG 81 (173)
T ss_pred CHHHHHHHHHHhhHHHHHhHHHHHHHHHHHHHHHHhhccccccccccCcCHHHHHH
Confidence 45666766667777777777776532 233444333334445667888755433
No 285
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=38.32 E-value=25 Score=31.92 Aligned_cols=86 Identities=12% Similarity=0.160 Sum_probs=50.1
Q ss_pred hhhhccccch-----HH---HHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCC
Q 021692 70 AGSLCEVLPI-----WG---ALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK 141 (309)
Q Consensus 70 ~G~L~Dr~Gp-----r~---vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~ 141 (309)
-+.+.||||. |- +.++|.++..+-+.++.-...... .+-... ...-.|.|++-+.+++.......||+
T Consensus 127 laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a~~~---~fhP~A-LAMasGvGSgSMMaAa~~aL~~~~P~ 202 (241)
T PF11299_consen 127 LAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLASLG---IFHPYA-LAMASGVGSGSMMAAASGALAAAYPE 202 (241)
T ss_pred eeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHHhcc---CCCHHH-HHHHcCCcHHHHHHHHHHHHHHHCcc
Confidence 5789999995 22 345566555433333322112110 011111 11225678888999999999999998
Q ss_pred CCCcchhhhhhhhhhhHH
Q 021692 142 SRGPVVGILKGFAGLGGA 159 (309)
Q Consensus 142 ~RG~avGi~~~~~GLg~a 159 (309)
......+...+.+=+++.
T Consensus 203 ~a~~i~A~AaaSNllt~~ 220 (241)
T PF11299_consen 203 MADQILAFAAASNLLTSV 220 (241)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 877777775555534433
No 286
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=38.16 E-value=1.1e+02 Score=30.17 Aligned_cols=77 Identities=14% Similarity=0.081 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhC---CCC--ChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcchhhhhhhhhh
Q 021692 83 LLVGALQNFIGYGWVWLIVTG---RAP--VLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGL 156 (309)
Q Consensus 83 llig~~l~~~gy~l~~l~~~~---~i~--~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~avGi~~~~~GL 156 (309)
+.+..++=.+=++++.++..+ +.+ -++-|..++...+.|+..|+..+.++....+.-+ ++|-.+-.++.-+..+
T Consensus 340 l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~ 419 (437)
T TIGR00939 340 LPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLV 419 (437)
T ss_pred hHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 334444444555666555333 100 0245556666777888889988888877777776 5576666665444434
Q ss_pred hHH
Q 021692 157 GGA 159 (309)
Q Consensus 157 g~a 159 (309)
|-+
T Consensus 420 Gl~ 422 (437)
T TIGR00939 420 GLA 422 (437)
T ss_pred HHH
Confidence 433
No 287
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=36.22 E-value=32 Score=34.59 Aligned_cols=72 Identities=21% Similarity=0.141 Sum_probs=47.4
Q ss_pred HHhhhhhhHH---hhHHHHHHhhCCCHHHHHHHHHHHHH-Hhhhhhhhhhhccc----cchHHH-HHHHHHHHHHHHHHH
Q 021692 27 SCAGIGYLFG---SISPVIKSSLNYNQKQIARLGVAKDL-GDSVGFLAGSLCEV----LPIWGA-LLVGALQNFIGYGWV 97 (309)
Q Consensus 27 ~~~g~~Y~fs---vys~~l~~~lg~s~~~~~~i~~~~~v-g~~~~~~~G~L~Dr----~Gpr~v-llig~~l~~~gy~l~ 97 (309)
+..|..+.|. .|.+++.+.+|.+..-.+.+-..+-+ |..+.++.|..+|| +||||- +..+..+..++..+.
T Consensus 40 ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Li 119 (498)
T KOG0637|consen 40 IAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLI 119 (498)
T ss_pred HHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhh
Confidence 4456566665 46677777899988777666544433 33447789999997 788775 555555555666554
Q ss_pred H
Q 021692 98 W 98 (309)
Q Consensus 98 ~ 98 (309)
.
T Consensus 120 g 120 (498)
T KOG0637|consen 120 G 120 (498)
T ss_pred h
Confidence 3
No 288
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=35.54 E-value=4.7e+02 Score=26.44 Aligned_cols=82 Identities=16% Similarity=0.161 Sum_probs=45.1
Q ss_pred hhhhhhhccchHHHHHHHHHHHHHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHH---HHHh-hhhhhhhhhccccchH
Q 021692 5 QERFVSFFNNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAK---DLGD-SVGFLAGSLCEVLPIW 80 (309)
Q Consensus 5 ~~~~k~~~~~rw~~l~~~~l~~~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~---~vg~-~~~~~~G~L~Dr~Gpr 80 (309)
.+.+|...++|.....+.+.+.-....+-.=..+...+++.+.-+..-.+..+-+. .+.. .+..+++.+..|+|-+
T Consensus 270 ~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~ 349 (491)
T PF03219_consen 270 KESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWR 349 (491)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 36677777888877666655543222232233555666666643333233332222 2222 2245789999999987
Q ss_pred HHHHHH
Q 021692 81 GALLVG 86 (309)
Q Consensus 81 ~vllig 86 (309)
...++.
T Consensus 350 ~~Alit 355 (491)
T PF03219_consen 350 TAALIT 355 (491)
T ss_pred HHHHHh
Confidence 766554
No 289
>PLN02922 prenyltransferase
Probab=34.08 E-value=4.1e+02 Score=25.09 Aligned_cols=58 Identities=12% Similarity=-0.003 Sum_probs=29.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcC-CCCCcc
Q 021692 78 PIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPV 146 (309)
Q Consensus 78 Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP-~~RG~a 146 (309)
.||.+..++..+..++....++....+ .+++.+ ..++.|...+++|++ .-|| ++||.+
T Consensus 94 s~~~v~~~~~~~~~la~~g~~ll~~~~---~~~~~l--~iG~~g~~~~~~Yt~------gP~pl~y~gLG 152 (315)
T PLN02922 94 SRRGVLAAAIGCLALGAAGLVWASLVA---GNIRVI--LLLAAAILCGYVYQC------PPFRLSYKGLG 152 (315)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHc---cChHHH--HHHHHHHHHHHHHhc------CCcccccCcch
Confidence 456666666666555544444432110 023322 223344455666653 4577 778875
No 290
>KOG3817 consensus Uncharacterized conserved protein [Function unknown]
Probab=33.44 E-value=2e+02 Score=27.97 Aligned_cols=33 Identities=24% Similarity=0.300 Sum_probs=19.6
Q ss_pred HHHhhhcCCCCCcchhhhhhhhhhhHHHHHHHHH
Q 021692 133 VSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYT 166 (309)
Q Consensus 133 ~~~~~~FP~~RG~avGi~~~~~GLg~ai~~~i~~ 166 (309)
-.+.|.||+ |....+++.++...|--+.-++..
T Consensus 181 flv~rf~PK-kt~~~~iliGgWs~slY~i~ql~~ 213 (452)
T KOG3817|consen 181 FLVARFFPK-KTMMYGILIGGWSISLYVIKQLAD 213 (452)
T ss_pred HHHHHhccc-ccceEEEEEccchhHHHHHHHHHH
Confidence 345588885 445566666777666555444443
No 291
>PF09925 DUF2157: Predicted membrane protein (DUF2157); InterPro: IPR018677 This family of various hypothetical prokaryotic proteins has no known function.
Probab=32.74 E-value=2.8e+02 Score=22.74 Aligned_cols=21 Identities=24% Similarity=-0.004 Sum_probs=14.5
Q ss_pred chHHHHHHHHHHHHHHHHHHH
Q 021692 78 PIWGALLVGALQNFIGYGWVW 98 (309)
Q Consensus 78 Gpr~vllig~~l~~~gy~l~~ 98 (309)
..+....+|+++...|...+-
T Consensus 32 ~~~~l~~lGall~~~gii~fv 52 (145)
T PF09925_consen 32 LARILLYLGALLLGLGIILFV 52 (145)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 356667778888877776653
No 292
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=32.06 E-value=1.2e+02 Score=29.42 Aligned_cols=118 Identities=13% Similarity=0.121 Sum_probs=56.5
Q ss_pred hhhhhccccchHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHhchhhhhhhHHHHHhhhcCCC--CCcc
Q 021692 69 LAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKS--RGPV 146 (309)
Q Consensus 69 ~~G~L~Dr~Gpr~vllig~~l~~~gy~l~~l~~~~~i~~~s~~~l~~~~~l~g~g~~~~~~~~~~~~~~~FP~~--RG~a 146 (309)
.+-+..||++--.=..+..++.+.|+.+.+. ++ +.+.-.+...++.+|+|+.-..-+. .....|+. -+--
T Consensus 81 ~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVaf--s~-----s~~~sL~GV~~aSissGlGEiTFL~-lss~Y~~~~i~~WS 152 (409)
T KOG3880|consen 81 TAPFFIHRFPFGFRIALVVLLSALSFFLVAF--SN-----SVPMSLLGVVFASISSGLGEITFLA-LSSRYPSIVIAGWS 152 (409)
T ss_pred hchhhhhhcccchHHHHHHHHHhcceEEEEe--cc-----chhHHHhhhhhhhhcCCcceeehhh-hhccCCCceecccc
Confidence 5677788865432223333445566655432 22 3444333445566666665544443 34445532 3333
Q ss_pred hhhhhhhhhhhHHHHHHHHH---HHccCChHHHHHHHHHHHHHHHHHHHhhcccCC
Q 021692 147 VGILKGFAGLGGAILTQVYT---MIHAPDHANLIFMVAVGPAMVVIALMFIIRPVG 199 (309)
Q Consensus 147 vGi~~~~~GLg~ai~~~i~~---~~~~~~~~~~~l~la~~~~~v~l~~~~~ir~~p 199 (309)
++.|..+.+.+.-|. .+++-.++..++..-.+|++.+..-.+.++.|+
T Consensus 153 -----SGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pe 203 (409)
T KOG3880|consen 153 -----SGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPE 203 (409)
T ss_pred -----CCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCc
Confidence 233333333333222 223335666665555566555555455566554
No 293
>PRK12592 putative monovalent cation/H+ antiporter subunit G; Reviewed
Probab=31.10 E-value=2.7e+02 Score=22.76 Aligned_cols=25 Identities=8% Similarity=-0.045 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCC
Q 021692 177 IFMVAVGPAMVVIALMFIIRPVGGHRQ 203 (309)
Q Consensus 177 ~l~la~~~~~v~l~~~~~ir~~p~~~~ 203 (309)
++.+|....+++.++ ++|.|+...+
T Consensus 14 lll~G~~f~l~gaiG--llRfPD~ytR 38 (126)
T PRK12592 14 FILSGAFLSFSASIG--LIRFRDTMSR 38 (126)
T ss_pred HHHHHHHHHHHHHHH--HHhCCcHHHH
Confidence 344454444444444 6777765433
No 294
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=30.06 E-value=6.1e+02 Score=25.85 Aligned_cols=90 Identities=12% Similarity=0.063 Sum_probs=58.3
Q ss_pred hhhhhccchHHHHHHHHHHHHHhhhhhhHHhhHHHHHHhhCCCHHHHHHHHHHHHHHh-----hhhhhhhhhccccchHH
Q 021692 7 RFVSFFNNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGD-----SVGFLAGSLCEVLPIWG 81 (309)
Q Consensus 7 ~~k~~~~~rw~~l~~~~l~~~~~g~~Y~fsvys~~l~~~lg~s~~~~~~i~~~~~vg~-----~~~~~~G~L~Dr~Gpr~ 81 (309)
.++...++.|...+--.+++.|.+.+|.+ ...+|+.+..+......+...+..+. .+.++.+++.+++.+++
T Consensus 17 ~~wpi~r~E~~kflpl~Ll~f~I~~ny~~---lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~ 93 (509)
T COG3202 17 RLWPIRRYELKKFLPLALLFFCILFNYNL---LRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREK 93 (509)
T ss_pred eeeeccHHHHHHHHHHHHHHHHHHHHHHH---HHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHH
Confidence 34444555566666666677777877764 45688888877555555665554432 23558999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 021692 82 ALLVGALQNFIGYGWVWL 99 (309)
Q Consensus 82 vllig~~l~~~gy~l~~l 99 (309)
+.-+-......-+.++++
T Consensus 94 vF~~~~~~F~~fF~LFa~ 111 (509)
T COG3202 94 VFYIILGFFLGFFALFAF 111 (509)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 866655554444555544
No 295
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=29.86 E-value=2.8e+02 Score=24.26 Aligned_cols=19 Identities=32% Similarity=0.405 Sum_probs=8.4
Q ss_pred hhhhcc--CchhHHHHHHHHH
Q 021692 232 VEDLVD--LNHTVIIIFTVIL 250 (309)
Q Consensus 232 ~~~~~~--~~~~~~~~~~~~~ 250 (309)
+....+ ++...+.++++++
T Consensus 170 lp~~inp~l~~~~~iiig~i~ 190 (206)
T PF06570_consen 170 LPPVINPVLPPWVYIIIGVIA 190 (206)
T ss_pred ccccCCcCCCHHHHHHHHHHH
Confidence 444443 5554444444433
No 296
>PRK12585 putative monovalent cation/H+ antiporter subunit G; Reviewed
Probab=29.29 E-value=79 Score=27.87 Aligned_cols=23 Identities=9% Similarity=0.027 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCC
Q 021692 177 IFMVAVGPAMVVIALMFIIRPVGGH 201 (309)
Q Consensus 177 ~l~la~~~~~v~l~~~~~ir~~p~~ 201 (309)
++++|.+..+++.++ ++|.|+-.
T Consensus 12 LLliG~~f~ligaIG--LlRfPD~Y 34 (197)
T PRK12585 12 MILIGGLLSILAAIG--VIRLPDVY 34 (197)
T ss_pred HHHHHHHHHHHHHHH--HHhcCcHH
Confidence 445555554455444 56666543
No 297
>PF14851 FAM176: FAM176 family
Probab=28.77 E-value=1.6e+02 Score=24.96 Aligned_cols=26 Identities=15% Similarity=0.085 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHhHHHhhhhcccc
Q 021692 243 IIIFTVILFVLLFIPIVIPIILSFFL 268 (309)
Q Consensus 243 ~~~~~~~~~~ll~~~~~v~~~~~~~~ 268 (309)
-+.+..|-+-|++..+++.++..+..
T Consensus 24 LYFv~gVC~GLlLtLcllV~risc~~ 49 (153)
T PF14851_consen 24 LYFVSGVCAGLLLTLCLLVIRISCRP 49 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHhhheeec
Confidence 34445555555566666677777743
No 298
>PRK10591 hypothetical protein; Provisional
Probab=28.27 E-value=81 Score=24.39 Aligned_cols=21 Identities=33% Similarity=0.431 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhccCch
Q 021692 216 YSVCLLLAAYLMGVMLVEDLVDLNH 240 (309)
Q Consensus 216 ~~~~~~l~~yl~~~~~~~~~~~~~~ 240 (309)
.++.+...+||.+. +|+.++.
T Consensus 17 lGi~LLv~a~Lsin----dyl~lP~ 37 (92)
T PRK10591 17 LGMLLLVVAYLSLN----DYLSLPE 37 (92)
T ss_pred HHHHHHHHHHHHHc----ccccCCc
Confidence 56666777787766 6776653
No 299
>PF15176 LRR19-TM: Leucine-rich repeat family 19 TM domain
Probab=26.93 E-value=1.1e+02 Score=24.04 Aligned_cols=22 Identities=14% Similarity=0.179 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHH-hHHHhhhhc
Q 021692 244 IIFTVILFVLLFI-PIVIPIILS 265 (309)
Q Consensus 244 ~~~~~~~~~ll~~-~~~v~~~~~ 265 (309)
...++++.++..+ .++++.|..
T Consensus 19 ~LVGVv~~al~~SlLIalaaKC~ 41 (102)
T PF15176_consen 19 FLVGVVVTALVTSLLIALAAKCP 41 (102)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhH
Confidence 3444444444443 344455544
No 300
>PF07214 DUF1418: Protein of unknown function (DUF1418); InterPro: IPR010815 This family consists of several hypothetical Enterobacterial proteins of around 100 residues in length. Members of this family are often described as YbjC. In Escherichia coli the ybjC gene is located downstream of nfsA (which encodes the major oxygen-insensitive nitroreductase). It is thought that nfsA and ybjC form an operon an its promoter is a class I SoxS-dependent promoter []. The function of this family is unknown.
Probab=26.00 E-value=2.3e+02 Score=22.12 Aligned_cols=46 Identities=24% Similarity=0.382 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhccCchhH----HHHHHHHHHHHHHHhHHHhhhhc
Q 021692 216 YSVCLLLAAYLMGVMLVEDLVDLNHTV----IIIFTVILFVLLFIPIVIPIILS 265 (309)
Q Consensus 216 ~~~~~~l~~yl~~~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~~~v~~~~~ 265 (309)
.++.+.+.+||.+ .+|+.++... -....+.+-++|++|-++.+-.+
T Consensus 17 lG~~LLv~a~Lsi----n~~l~LP~~l~~~~aai~MIf~Gi~lMlPAav~ivWR 66 (96)
T PF07214_consen 17 LGMILLVLAYLSI----NDYLSLPAPLSTPTAAIAMIFVGIGLMLPAAVNIVWR 66 (96)
T ss_pred HHHHHHHHHHHHH----cccccCcccccCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666667654 4776655322 22333344455666777666543
No 301
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=25.12 E-value=4.8e+02 Score=23.08 Aligned_cols=18 Identities=6% Similarity=0.325 Sum_probs=8.0
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 021692 212 FTFIYSVCLLLAAYLMGV 229 (309)
Q Consensus 212 f~~~~~~~~~l~~yl~~~ 229 (309)
|....+.+.+..+++.+.
T Consensus 162 ~K~~lv~~~sm~lWi~v~ 179 (226)
T COG4858 162 WKYLLVAVLSMLLWIAVM 179 (226)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 334444444444444444
No 302
>TIGR02896 spore_III_AF stage III sporulation protein AF. This family represents the stage III sporulation protein AF of the bacterial endospore formation program, which exists in some but not all members of the Firmicutes (formerly called low-GC Gram-positives). The C-terminal region of this protein is poorly conserved, so only the N-terminal region, which includes two predicted transmembrane domains, is included in the seed alignment.
Probab=24.34 E-value=2.8e+02 Score=21.92 Aligned_cols=44 Identities=18% Similarity=0.305 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHhhhhhccCch---hHHHHHHHHHHHHHHHhHHHhhh
Q 021692 220 LLLAAYLMGVMLVEDLVDLNH---TVIIIFTVILFVLLFIPIVIPII 263 (309)
Q Consensus 220 ~~l~~yl~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~~~v~~~ 263 (309)
.-+++|+...+++...++-++ =.|.+.+.+++++++.|++=.+.
T Consensus 8 ~~i~~~~il~t~~~~llP~~~~kkYvr~v~Gl~Li~~il~Pi~~l~~ 54 (106)
T TIGR02896 8 TNIIVLILLATILEMLLPNSSLKKYVKFVVGLILMVVILNPIIKLLT 54 (106)
T ss_pred HHHHHHHHHHHHHHHHCCCccHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 456677777777777776443 34556677777777778775443
No 303
>PF11872 DUF3392: Protein of unknown function (DUF3392); InterPro: IPR021813 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=24.17 E-value=3.2e+02 Score=21.70 Aligned_cols=14 Identities=0% Similarity=0.083 Sum_probs=6.5
Q ss_pred hhhhhhhhccchHH
Q 021692 4 FQERFVSFFNNRWL 17 (309)
Q Consensus 4 ~~~~~k~~~~~rw~ 17 (309)
.|+.+|+..+++-+
T Consensus 37 IN~~lrr~l~~~~F 50 (106)
T PF11872_consen 37 INRFLRRLLSGYHF 50 (106)
T ss_pred HHHHHHHHhcCCcc
Confidence 44555555444433
No 304
>PRK12586 putative monovalent cation/H+ antiporter subunit G; Reviewed
Probab=23.18 E-value=3.9e+02 Score=22.45 Aligned_cols=24 Identities=8% Similarity=0.083 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCC
Q 021692 176 LIFMVAVGPAMVVIALMFIIRPVGGH 201 (309)
Q Consensus 176 ~~l~la~~~~~v~l~~~~~ir~~p~~ 201 (309)
.++.+|.+..+++.++ ++|.|+..
T Consensus 14 ill~lG~~f~ligaIG--llRfPD~y 37 (145)
T PRK12586 14 IMILLGSIIALISAIG--IVKFQDVF 37 (145)
T ss_pred HHHHHHHHHHHHHHHH--HHhCCcHH
Confidence 3445555554445444 56766644
No 305
>PF10066 DUF2304: Uncharacterized conserved protein (DUF2304); InterPro: IPR019277 This entry represents hypothetical archaeal and bacterial proteins that have no known function.
Probab=22.37 E-value=69 Score=25.46 Aligned_cols=49 Identities=18% Similarity=0.259 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhhhhhccCchhHHHHHHHHHHHHHHHhHHHhhhhccccc
Q 021692 221 LLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIILSFFLE 269 (309)
Q Consensus 221 ~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~v~~~~~~~~~ 269 (309)
.++++=-....+.+.++..++....+.+..++++..-+-.-.+.+..++
T Consensus 45 ~~~ifP~~~~~vA~~lGi~~~~n~lf~~~i~~ll~~~~~l~~~is~le~ 93 (115)
T PF10066_consen 45 ILSIFPNILDWVAKLLGIGRPPNLLFYLGILFLLVIIFSLYVRISRLEE 93 (115)
T ss_pred HHHhhhhHHHHHHHHHCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555666677788888877777766666655554444444433333
No 306
>CHL00031 psbT photosystem II protein T
Probab=22.28 E-value=2e+02 Score=17.83 Aligned_cols=14 Identities=7% Similarity=-0.026 Sum_probs=10.3
Q ss_pred HHHhhcccCCCCCC
Q 021692 190 ALMFIIRPVGGHRQ 203 (309)
Q Consensus 190 ~~~~~ir~~p~~~~ 203 (309)
..+.+.|+||...+
T Consensus 18 FFAI~FRePPri~k 31 (33)
T CHL00031 18 FFAIFFREPPKVPT 31 (33)
T ss_pred HHhheecCCCCCCC
Confidence 34678899998754
No 307
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.21 E-value=1.9e+02 Score=23.22 Aligned_cols=13 Identities=31% Similarity=0.237 Sum_probs=8.3
Q ss_pred hhhhhhhhhcccc
Q 021692 65 SVGFLAGSLCEVL 77 (309)
Q Consensus 65 ~~~~~~G~L~Dr~ 77 (309)
.+|...||+.|||
T Consensus 57 lVGa~iG~llD~~ 69 (116)
T COG5336 57 LVGAGIGWLLDKF 69 (116)
T ss_pred HHHHHHHHHHHHh
Confidence 4466667777774
No 308
>COG1575 MenA 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism]
Probab=21.93 E-value=6.9e+02 Score=23.68 Aligned_cols=24 Identities=21% Similarity=-0.027 Sum_probs=13.1
Q ss_pred hhhcC-CCCCcchhhhhhhhhhhHH
Q 021692 136 VQNFP-KSRGPVVGILKGFAGLGGA 159 (309)
Q Consensus 136 ~~~FP-~~RG~avGi~~~~~GLg~a 159 (309)
..-|| .++|.+==+.--+.|..+.
T Consensus 139 gGp~PlgY~gLGEi~~~vffG~l~v 163 (303)
T COG1575 139 GGPFPLGYMGLGEIFVGVFFGPLIV 163 (303)
T ss_pred cCCcCcccCCHHHHHHHHHHHHHHH
Confidence 36688 6777664443344444333
No 309
>PLN03151 cation/calcium exchanger; Provisional
Probab=21.56 E-value=9.6e+02 Score=25.25 Aligned_cols=23 Identities=0% Similarity=-0.054 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHhHHHhhhhccc
Q 021692 245 IFTVILFVLLFIPIVIPIILSFF 267 (309)
Q Consensus 245 ~~~~~~~~ll~~~~~v~~~~~~~ 267 (309)
.-+++++.+.+..+.+.+--++.
T Consensus 271 ~eai~ll~lY~~Yv~vv~~~~~l 293 (650)
T PLN03151 271 GGAIAFVSIYVVYAFLVAANEIL 293 (650)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHH
Confidence 44666777777766555533333
No 310
>PF14143 YrhC: YrhC-like protein
Probab=20.54 E-value=2.8e+02 Score=20.47 Aligned_cols=47 Identities=17% Similarity=0.152 Sum_probs=24.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhhhhccCchhHHHHHHHHHHHHHHHhHH
Q 021692 210 SSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIV 259 (309)
Q Consensus 210 ~~f~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~ 259 (309)
+||.+ +.+++..||.+-.++.+--.-........+.+.+.|..+.+.
T Consensus 11 Krf~~---vLLAvs~FlYiG~viP~~~~~~~~~~~m~~~~~~~l~~a~~f 57 (72)
T PF14143_consen 11 KRFAF---VLLAVSTFLYIGTVIPIGAKETAQKYIMMGAICIFLAGAFLF 57 (72)
T ss_pred HHHHH---HHHHHHHHHHHHhhCCccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 45554 456777777777776633222222223444455555555444
Done!