Your job contains 1 sequence.
>021695
MESSASGRALPHHREPFDWLTRPPLNLITTTAKHSLSVSLSRRLLHHHPLHARRLLHSSV
KKLSRLCHIPRLKDQWCENAFRFNGVNFFRFTNDAFASSLSFFNGGGTRKNSGHEGTSHL
DTARTNLFIGRQWTNILLAVNVLVYIAQFATQDKLLLWGAKINSLIDKGQFWRLATSAFL
HANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAMSYRFCNSPAVGASGAI
FGLVGSFAVFIMRHRNILGGGKEELQHLAKVIIFNMVCSAAFANIVKIESRHTLTGETCY
FIDPSKQMN
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021695
(309 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2032940 - symbol:RBL10 "RHOMBOID-like protein ... 593 1.1e-57 1
UNIPROTKB|Q8EI50 - symbol:SO_1000 "Rhomboid protease" spe... 189 1.5e-12 1
TIGR_CMR|SO_1000 - symbol:SO_1000 "rhomboid family protei... 189 1.5e-12 1
TAIR|locus:2159808 - symbol:AT5G38510 species:3702 "Arabi... 176 4.2e-11 1
UNIPROTKB|Q81VF8 - symbol:BAS0235 "Rhomboid family protei... 148 3.8e-10 1
TIGR_CMR|BA_0249 - symbol:BA_0249 "rhomboid family protei... 148 3.8e-10 1
TAIR|locus:2182925 - symbol:RBL3 "RHOMBOID-like protein 3... 161 1.6e-09 1
DICTYBASE|DDB_G0295849 - symbol:DDB_G0295849 "rhomboid fa... 162 2.6e-09 1
UNIPROTKB|Q5HUF9 - symbol:CJE1083 "Rhomboid family protei... 140 3.0e-09 1
TIGR_CMR|CJE_1083 - symbol:CJE_1083 "rhomboid family prot... 140 3.0e-09 1
UNIPROTKB|P46116 - symbol:aarA "Rhomboid protease AarA" s... 155 4.2e-09 1
TAIR|locus:2029376 - symbol:KOM "KOMPEITO" species:3702 "... 156 6.4e-09 1
UNIPROTKB|Q74DX7 - symbol:GSU1188 "Rhomboid-related membr... 137 3.7e-08 2
TIGR_CMR|GSU_1188 - symbol:GSU_1188 "rhomboid family prot... 137 3.7e-08 2
TAIR|locus:2035190 - symbol:RBL5 "RHOMBOID-like protein 5... 146 7.1e-08 1
TAIR|locus:2015193 - symbol:RBL2 "RHOMBOID-like 2" specie... 144 1.3e-07 1
GENEDB_PFALCIPARUM|PF11_0149 - symbol:PF11_0149 "hypothet... 139 3.5e-07 1
UNIPROTKB|Q8IIM2 - symbol:ROM1 "Rhomboid protease ROM1, p... 139 3.5e-07 1
TAIR|locus:2127258 - symbol:RBL7 "RHOMBOID-like protein 7... 140 3.7e-07 1
TAIR|locus:2066102 - symbol:RBL1 "RHOMBOID-like 1" specie... 139 7.8e-07 1
UNIPROTKB|Q97NE9 - symbol:SP_2094 "Putative uncharacteriz... 131 1.4e-06 1
TAIR|locus:2084465 - symbol:RBL4 "RHOMBOID-like protein 4... 135 2.3e-06 1
UNIPROTKB|Q3ZA67 - symbol:DET0132 "Rhomboid family protei... 125 2.8e-06 1
TIGR_CMR|DET_0132 - symbol:DET_0132 "rhomboid family prot... 125 2.8e-06 1
TAIR|locus:2195067 - symbol:RBL6 "RHOMBOID-like protein 6... 126 1.5e-05 1
UNIPROTKB|I3LRY0 - symbol:RHBDL3 "Uncharacterized protein... 123 1.5e-05 1
UNIPROTKB|Q3ADW0 - symbol:CHY_0820 "Rhomboid family prote... 123 1.6e-05 1
TIGR_CMR|CHY_0820 - symbol:CHY_0820 "rhomboid family prot... 123 1.6e-05 1
UNIPROTKB|Q482Z4 - symbol:CPS_2148 "Membrane protein, Rho... 120 2.2e-05 1
TIGR_CMR|CPS_2148 - symbol:CPS_2148 "membrane protein, Rh... 120 2.2e-05 1
SGD|S000003333 - symbol:PCP1 "Mitochondrial serine protea... 125 2.5e-05 1
UNIPROTKB|F1NQJ7 - symbol:RHBDL3 "Uncharacterized protein... 124 3.5e-05 1
UNIPROTKB|Q495Y4 - symbol:RHBDL3 "cDNA FLJ42579 fis, clon... 122 4.3e-05 1
TIGR_CMR|SPO_3011 - symbol:SPO_3011 "peptidase, S54 (rhom... 120 4.3e-05 1
WB|WBGene00004404 - symbol:rom-5 species:6239 "Caenorhabd... 122 4.9e-05 1
UNIPROTKB|F1PPT6 - symbol:RHBDL3 "Uncharacterized protein... 121 5.5e-05 1
UNIPROTKB|Q9KQL7 - symbol:VC_1981 "Putative uncharacteriz... 117 6.9e-05 1
TIGR_CMR|VC_1981 - symbol:VC_1981 "hypothetical protein" ... 117 6.9e-05 1
UNIPROTKB|Q495Y5 - symbol:RHBDL3 "RHBDL3 protein" species... 122 7.0e-05 1
UNIPROTKB|P58872 - symbol:RHBDL3 "Rhomboid-related protei... 122 7.3e-05 1
UNIPROTKB|P09391 - symbol:glpG "intramembrane serine prot... 119 7.5e-05 1
UNIPROTKB|Q604D0 - symbol:MCA2616 "Rhomboid family protei... 118 7.9e-05 1
UNIPROTKB|F1MBG2 - symbol:RHBDL3 "Uncharacterized protein... 121 8.5e-05 1
CGD|CAL0000015 - symbol:orf19.1643 species:5476 "Candida ... 117 0.00018 1
ZFIN|ZDB-GENE-050417-2 - symbol:rhbdl3 "rhomboid, veinlet... 118 0.00021 1
WB|WBGene00004403 - symbol:rom-4 species:6239 "Caenorhabd... 122 0.00032 1
UNIPROTKB|Q00M95 - symbol:RHBDF2 "Inactive rhomboid prote... 120 0.00034 1
UNIPROTKB|F1RZ67 - symbol:RHBDF2 "Uncharacterized protein... 120 0.00034 1
UNIPROTKB|G4N225 - symbol:MGG_07535 "Rhomboid family memb... 118 0.00034 1
UNIPROTKB|F1RZ68 - symbol:RHBDF2 "Uncharacterized protein... 120 0.00035 1
UNIPROTKB|E1BLR4 - symbol:RHBDF2 "Uncharacterized protein... 119 0.00044 1
UNIPROTKB|Q6PJF5 - symbol:RHBDF2 "Inactive rhomboid prote... 118 0.00059 1
WB|WBGene00004402 - symbol:rom-3 species:6239 "Caenorhabd... 118 0.00060 1
MGI|MGI:2442473 - symbol:Rhbdf2 "rhomboid 5 homolog 2 (Dr... 117 0.00073 1
MGI|MGI:2179276 - symbol:Rhbdl3 "rhomboid, veinlet-like 3... 112 0.00099 1
RGD|1311901 - symbol:Rhbdl3 "rhomboid, veinlet-like 3 (Dr... 112 0.00099 1
>TAIR|locus:2032940 [details] [associations]
symbol:RBL10 "RHOMBOID-like protein 10" species:3702
"Arabidopsis thaliana" [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0031969 "chloroplast
membrane" evidence=IDA] InterPro:IPR002610 InterPro:IPR022764
Pfam:PF01694 GO:GO:0016021 EMBL:CP002684 GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 GO:GO:0031969 IPI:IPI00535626
RefSeq:NP_173900.2 UniGene:At.16920 ProteinModelPortal:F4ICF4
SMR:F4ICF4 EnsemblPlants:AT1G25290.1 GeneID:839113
KEGG:ath:AT1G25290 OMA:HANIGHL Uniprot:F4ICF4
Length = 343
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 121/230 (52%), Positives = 159/230 (69%)
Query: 60 VKKLSRLCHIPRLKDQWCENAFRFNGVNFFRFTNDAFASSLS----FFNGGGTRKN--SG 113
+KKL R+K + F FNG NF + D S S FFNGG +R N G
Sbjct: 50 LKKLQHFSDDARMKFARYQRVFVFNGANFLKSRVDIRLSQSSPFVCFFNGGESRLNPRGG 109
Query: 114 HEGTSHLDTARTNLFIGRQWTNILLAVNVLVYIAQFATQDKLLLWGAKINSLIDKGQFWR 173
EG+S+ +T++ N GR+WTN+LLA+NV++YIAQ A+ K+L WGAKINSLI++GQ WR
Sbjct: 110 EEGSSNPETSKRNTVNGRRWTNVLLAINVIMYIAQIASDGKVLTWGAKINSLIERGQLWR 169
Query: 174 LATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIAS-------SAMSY 226
LAT++ LHAN HLM+NCYSLNSIGPT E + GP+R+L VY +SA+A SAMSY
Sbjct: 170 LATASVLHANPMHLMINCYSLNSIGPTAESLGGPKRFLAVYLTSAVAKPILRVLGSAMSY 229
Query: 227 RFCNSPAVGASGAIFGLVGSFAVFIMRHRNILGGGKEELQHLAKVIIFNM 276
F +P+VGASGAIFGLVGS AVF++RH+ ++ GG E+L +A++I NM
Sbjct: 230 WFNKAPSVGASGAIFGLVGSVAVFVIRHKQMVRGGNEDLMQIAQIIALNM 279
>UNIPROTKB|Q8EI50 [details] [associations]
symbol:SO_1000 "Rhomboid protease" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 EMBL:AE014299
GenomeReviews:AE014299_GR RefSeq:NP_716628.1
ProteinModelPortal:Q8EI50 GeneID:1168841 KEGG:son:SO_1000
PATRIC:23521647 HOGENOM:HOG000296107 OMA:FEARNGH
ProtClustDB:CLSK906046 Uniprot:Q8EI50
Length = 528
Score = 189 (71.6 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 49/132 (37%), Positives = 72/132 (54%)
Query: 129 IGRQWTNILLAVNVLVYIAQ-FATQ------DKLLL-WGAKINSLIDKGQFWRLATSAFL 180
+G T ILL VL+++ FA+ + +LL WGA + L+ Q WRL ++ FL
Sbjct: 332 VGFVITPILLLSKVLIFMLMVFASHHFITLPNSVLLDWGANLRQLVLDQQVWRLISNVFL 391
Query: 181 HANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAMSYRFCNSP-AVGASGA 239
H + HL+ N Y L G +E + G R LGVY S +A+S S + + ++GASGA
Sbjct: 392 HGGLMHLIFNLYGLFFAGIFLEPLLGKWRLLGVYLMSGLAASIASISWYEATISIGASGA 451
Query: 240 IFGLVGSFAVFI 251
I GL G ++I
Sbjct: 452 IMGLFGVLIMWI 463
>TIGR_CMR|SO_1000 [details] [associations]
symbol:SO_1000 "rhomboid family protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 EMBL:AE014299
GenomeReviews:AE014299_GR RefSeq:NP_716628.1
ProteinModelPortal:Q8EI50 GeneID:1168841 KEGG:son:SO_1000
PATRIC:23521647 HOGENOM:HOG000296107 OMA:FEARNGH
ProtClustDB:CLSK906046 Uniprot:Q8EI50
Length = 528
Score = 189 (71.6 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 49/132 (37%), Positives = 72/132 (54%)
Query: 129 IGRQWTNILLAVNVLVYIAQ-FATQ------DKLLL-WGAKINSLIDKGQFWRLATSAFL 180
+G T ILL VL+++ FA+ + +LL WGA + L+ Q WRL ++ FL
Sbjct: 332 VGFVITPILLLSKVLIFMLMVFASHHFITLPNSVLLDWGANLRQLVLDQQVWRLISNVFL 391
Query: 181 HANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAMSYRFCNSP-AVGASGA 239
H + HL+ N Y L G +E + G R LGVY S +A+S S + + ++GASGA
Sbjct: 392 HGGLMHLIFNLYGLFFAGIFLEPLLGKWRLLGVYLMSGLAASIASISWYEATISIGASGA 451
Query: 240 IFGLVGSFAVFI 251
I GL G ++I
Sbjct: 452 IMGLFGVLIMWI 463
>TAIR|locus:2159808 [details] [associations]
symbol:AT5G38510 species:3702 "Arabidopsis thaliana"
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694
GO:GO:0016021 EMBL:AB005231 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 eggNOG:COG0705
EMBL:BT012562 EMBL:AK226685 IPI:IPI00531406 RefSeq:NP_001078681.1
RefSeq:NP_198667.1 UniGene:At.50493 ProteinModelPortal:Q9FFX0
STRING:Q9FFX0 PaxDb:Q9FFX0 PRIDE:Q9FFX0 EnsemblPlants:AT5G38510.1
EnsemblPlants:AT5G38510.2 GeneID:833839 KEGG:ath:AT5G38510
TAIR:At5g38510 HOGENOM:HOG000152445 InParanoid:Q9FFX0 OMA:SHFGPID
PhylomeDB:Q9FFX0 ProtClustDB:CLSN2687108 Genevestigator:Q9FFX0
Uniprot:Q9FFX0
Length = 434
Score = 176 (67.0 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 39/126 (30%), Positives = 72/126 (57%)
Query: 156 LLWGAKINSLIDKGQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYF 215
LL+GAKIN LI G++WRL T FLH+ I H+ ++ ++L + GP + + G + +Y
Sbjct: 216 LLYGAKINDLILAGEWWRLVTPMFLHSGIPHVALSSWALLTFGPKVCRDYGLFTFCLIYI 275
Query: 216 SSAIASSAMSYRFCNSPAVGASGAIFGLVGSFAVFIMRHRNILGGGK-EELQHLAKVII- 273
++ + MS+ P VG +G F L+G++ V +++ ++ + E+L A ++
Sbjct: 276 LGGVSGNFMSFLHTADPTVGGTGPAFALIGAWLVDQNQNKEMIKSNEYEDLFQKAIIMTG 335
Query: 274 FNMVCS 279
F ++ S
Sbjct: 336 FGLILS 341
>UNIPROTKB|Q81VF8 [details] [associations]
symbol:BAS0235 "Rhomboid family protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR002610
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 RefSeq:NP_842802.1
RefSeq:YP_016855.1 RefSeq:YP_026520.1 ProteinModelPortal:Q81VF8
DNASU:1085915 EnsemblBacteria:EBBACT00000011813
EnsemblBacteria:EBBACT00000014219 EnsemblBacteria:EBBACT00000019748
GeneID:1085915 GeneID:2818791 GeneID:2851802 KEGG:ban:BA_0249
KEGG:bar:GBAA_0249 KEGG:bat:BAS0235 HOGENOM:HOG000082474
OMA:MSSYLIM ProtClustDB:CLSK915750
BioCyc:BANT260799:GJAJ-257-MONOMER
BioCyc:BANT261594:GJ7F-265-MONOMER Uniprot:Q81VF8
Length = 190
Score = 148 (57.2 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 37/121 (30%), Positives = 63/121 (52%)
Query: 138 LAVNVL-VYIAQFATQDKLLLWGAKINSLIDKGQFWRLATSAFLHANIAHLMVNCYSLNS 196
+A+++L + D L A + I G++WRL TS F+H ++ H + N L
Sbjct: 13 IAISLLLIQFIMIMLGDFFLFPMAAYHEYIANGEWWRLITSLFVHVDLQHFLSNSICLFV 72
Query: 197 IGPTMEKICGPRRYLGVYFSSAIASSAMSYRFCNSPAV--GASGAIFGLVGSFAVFIMRH 254
+G ++EK G ++ ++F S I + SY + GASG IFGL+G+ +F++
Sbjct: 73 LGSSIEKQLGRFSFIIIFFLSGILGNIFSYLIMPHEYIHAGASGGIFGLLGA-QLFLLYS 131
Query: 255 R 255
R
Sbjct: 132 R 132
>TIGR_CMR|BA_0249 [details] [associations]
symbol:BA_0249 "rhomboid family protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 RefSeq:NP_842802.1
RefSeq:YP_016855.1 RefSeq:YP_026520.1 ProteinModelPortal:Q81VF8
DNASU:1085915 EnsemblBacteria:EBBACT00000011813
EnsemblBacteria:EBBACT00000014219 EnsemblBacteria:EBBACT00000019748
GeneID:1085915 GeneID:2818791 GeneID:2851802 KEGG:ban:BA_0249
KEGG:bar:GBAA_0249 KEGG:bat:BAS0235 HOGENOM:HOG000082474
OMA:MSSYLIM ProtClustDB:CLSK915750
BioCyc:BANT260799:GJAJ-257-MONOMER
BioCyc:BANT261594:GJ7F-265-MONOMER Uniprot:Q81VF8
Length = 190
Score = 148 (57.2 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 37/121 (30%), Positives = 63/121 (52%)
Query: 138 LAVNVL-VYIAQFATQDKLLLWGAKINSLIDKGQFWRLATSAFLHANIAHLMVNCYSLNS 196
+A+++L + D L A + I G++WRL TS F+H ++ H + N L
Sbjct: 13 IAISLLLIQFIMIMLGDFFLFPMAAYHEYIANGEWWRLITSLFVHVDLQHFLSNSICLFV 72
Query: 197 IGPTMEKICGPRRYLGVYFSSAIASSAMSYRFCNSPAV--GASGAIFGLVGSFAVFIMRH 254
+G ++EK G ++ ++F S I + SY + GASG IFGL+G+ +F++
Sbjct: 73 LGSSIEKQLGRFSFIIIFFLSGILGNIFSYLIMPHEYIHAGASGGIFGLLGA-QLFLLYS 131
Query: 255 R 255
R
Sbjct: 132 R 132
>TAIR|locus:2182925 [details] [associations]
symbol:RBL3 "RHOMBOID-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
GO:GO:0009506 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006508
EMBL:AL163652 GO:GO:0004252 PANTHER:PTHR22936 UniGene:At.71052
HOGENOM:HOG000239666 EMBL:AY058157 EMBL:AY098983 IPI:IPI00536071
PIR:T48496 RefSeq:NP_196342.1 UniGene:At.48993
ProteinModelPortal:Q9LYP1 IntAct:Q9LYP1 MEROPS:S54.A02 PRIDE:Q9LYP1
EnsemblPlants:AT5G07250.1 GeneID:830616 KEGG:ath:AT5G07250
TAIR:At5g07250 InParanoid:Q9LYP1 OMA:KLGALEW PhylomeDB:Q9LYP1
ProtClustDB:CLSN2687058 Genevestigator:Q9LYP1 Uniprot:Q9LYP1
Length = 346
Score = 161 (61.7 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 43/115 (37%), Positives = 61/115 (53%)
Query: 163 NSLIDKGQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASS 222
+ +++K + WRL T +LHA + HL N SL IG +E+ G R +Y S I S
Sbjct: 126 SKVVEKKEGWRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQFGFVRIGVIYLLSGIGGS 185
Query: 223 AMSYRFC-NSPAVGASGAIFGLVGSFAVFIMRHRNILGGGKEELQHLAKVIIFNM 276
+S F NS +VGASGA+FGL+GS + + I L L VI+ N+
Sbjct: 186 VLSSLFIRNSISVGASGALFGLLGSMLSELFTNWTIYSNKIAALLTLLFVILINL 240
>DICTYBASE|DDB_G0295849 [details] [associations]
symbol:DDB_G0295849 "rhomboid family protein"
species:44689 "Dictyostelium discoideum" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA;ISS]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0008236 "serine-type peptidase activity" evidence=ISS]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694
dictyBase:DDB_G0295849 GO:GO:0016021 GO:GO:0006508 GO:GO:0004252
GO:GO:0008236 PANTHER:PTHR22936 EMBL:AAFI02000044 MEROPS:S54.A16
RefSeq:XP_002649151.1 EnsemblProtists:DDB0266786 GeneID:8623398
KEGG:ddi:DDB_G0295849 Uniprot:C7G025
Length = 489
Score = 162 (62.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 38/105 (36%), Positives = 57/105 (54%)
Query: 155 LLLWGAKINSLIDKGQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVY 214
LL GAK + LI G++WR T FLH I H ++N + +G +E+ G R + +Y
Sbjct: 277 LLDVGAKYSPLILNGEWWRFFTPIFLHVGIFHYLMNMVTQLRVGMQLERAYGGHRIVPIY 336
Query: 215 FSSAIASSAMS-YRFCNSPAVGASGAIFGLVGSFAVFIMRHRNIL 258
+A + S NS VGASGAIFG +G ++R+ ++L
Sbjct: 337 LLCGVAGNLCSAIMLPNSVQVGASGAIFGFLGVLLTDLIRNWSVL 381
>UNIPROTKB|Q5HUF9 [details] [associations]
symbol:CJE1083 "Rhomboid family protein" species:195099
"Campylobacter jejuni RM1221" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0705 HOGENOM:HOG000229238
PIR:H81375 RefSeq:YP_179076.1 ProteinModelPortal:Q5HUF9
STRING:Q5HUF9 GeneID:3231592 KEGG:cjr:CJE1083 PATRIC:20043975
OMA:YWRLVSP ProtClustDB:CLSK879037
BioCyc:CJEJ195099:GJC0-1109-MONOMER Uniprot:Q5HUF9
Length = 172
Score = 140 (54.3 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 39/125 (31%), Positives = 63/125 (50%)
Query: 134 TNILLAVNVLVYIAQFATQDKLLLWGAKINSLIDKGQFWRLATSAFLHANIAHLMVNCYS 193
T L+ +N+L Y + D + G +N L G +W+L +S FLH N+ HL++N
Sbjct: 3 TIFLIFLNILCYF--LISYDYYNILG--LNILFFNGAYWQLLSSMFLHGNLTHLILNMIV 58
Query: 194 LNSIGPTMEKICGPRRYLGVYFSSAIASSAMS-------YRFC--NSPAVGASGAIFGLV 244
L G +E G ++ +YF + S +S +++ N +GASGAI L+
Sbjct: 59 LFQFGRMLETYLGALCFIFIYFIGGLLCSLLSVFYVYFDFKYFGENINVIGASGAICVLM 118
Query: 245 GSFAV 249
G +AV
Sbjct: 119 GFYAV 123
>TIGR_CMR|CJE_1083 [details] [associations]
symbol:CJE_1083 "rhomboid family protein" species:195099
"Campylobacter jejuni RM1221" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=ISS] InterPro:IPR002610
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0705 HOGENOM:HOG000229238
PIR:H81375 RefSeq:YP_179076.1 ProteinModelPortal:Q5HUF9
STRING:Q5HUF9 GeneID:3231592 KEGG:cjr:CJE1083 PATRIC:20043975
OMA:YWRLVSP ProtClustDB:CLSK879037
BioCyc:CJEJ195099:GJC0-1109-MONOMER Uniprot:Q5HUF9
Length = 172
Score = 140 (54.3 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 39/125 (31%), Positives = 63/125 (50%)
Query: 134 TNILLAVNVLVYIAQFATQDKLLLWGAKINSLIDKGQFWRLATSAFLHANIAHLMVNCYS 193
T L+ +N+L Y + D + G +N L G +W+L +S FLH N+ HL++N
Sbjct: 3 TIFLIFLNILCYF--LISYDYYNILG--LNILFFNGAYWQLLSSMFLHGNLTHLILNMIV 58
Query: 194 LNSIGPTMEKICGPRRYLGVYFSSAIASSAMS-------YRFC--NSPAVGASGAIFGLV 244
L G +E G ++ +YF + S +S +++ N +GASGAI L+
Sbjct: 59 LFQFGRMLETYLGALCFIFIYFIGGLLCSLLSVFYVYFDFKYFGENINVIGASGAICVLM 118
Query: 245 GSFAV 249
G +AV
Sbjct: 119 GFYAV 123
>UNIPROTKB|P46116 [details] [associations]
symbol:aarA "Rhomboid protease AarA" species:588
"Providencia stuartii" [GO:0008236 "serine-type peptidase activity"
evidence=IMP] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694
GO:GO:0016021 GO:GO:0005886 GO:GO:0006508 EMBL:L28755 PIR:A55862
ProteinModelPortal:P46116 MEROPS:S54.004 BRENDA:3.4.21.105
GO:GO:0004252 GO:GO:0008236 PANTHER:PTHR22936 Uniprot:P46116
Length = 281
Score = 155 (59.6 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 52/180 (28%), Positives = 81/180 (45%)
Query: 134 TNILLAVNVLVYIAQ--FAT-----QDKLLLWGAKINSLIDKGQFWRLATSAFLHANIAH 186
T L+ +N+ VY Q FA+ + L+L+GA I L G +WR S LH+N H
Sbjct: 24 TLTLVLLNIAVYFYQIVFASPLDSRESNLILFGANIYQLSLTGDWWRYPISMMLHSNGTH 83
Query: 187 LMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAMS-----YRFCNSP--------- 232
L NC +L IG E+ G + L +Y S I ++ S Y NS
Sbjct: 84 LAFNCLALFVIGIGCERAYGKFKLLAIYIISGIGAALFSAYWQYYEISNSDLWTDSTVYI 143
Query: 233 --AVGASGAIFGLVGSFAVFIMRHRNILGGGKEELQHLAKVIIFNMVCSAAFANIVKIES 290
VGASGAI G+ + +++++ +Q K ++N++ A I ++S
Sbjct: 144 TIGVGASGAIMGIAAASVIYLIKVVINKPNPHPVIQRRQKYQLYNLIAMIALTLINGLQS 203
>TAIR|locus:2029376 [details] [associations]
symbol:KOM "KOMPEITO" species:3702 "Arabidopsis thaliana"
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR002610 InterPro:IPR022764
Pfam:PF01694 GO:GO:0016021 EMBL:CP002684 GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 IPI:IPI00534674 RefSeq:NP_177909.2
UniGene:At.52552 ProteinModelPortal:F4I8K2
EnsemblPlants:AT1G77860.1 GeneID:844122 KEGG:ath:AT1G77860
OMA:KQKLDRP PhylomeDB:F4I8K2 ArrayExpress:F4I8K2 Uniprot:F4I8K2
Length = 351
Score = 156 (60.0 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 33/100 (33%), Positives = 54/100 (54%)
Query: 159 GAKINSLIDKGQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSA 218
G +L + + WR+ TS +LH+ + HL +N SL +G ME+ GP R +YF S
Sbjct: 110 GLSWKALTENHEIWRILTSPWLHSGLFHLFINLGSLIFVGIYMEQQFGPLRIAVIYFLSG 169
Query: 219 IASSAMSYRFC-NSPAVGASGAIFGLVGSFAVFIMRHRNI 257
I S + F N P++ + A FGL+G+ + ++ N+
Sbjct: 170 IMGSLFAVLFVRNIPSISSGAAFFGLIGAMLSALAKNWNL 209
>UNIPROTKB|Q74DX7 [details] [associations]
symbol:GSU1188 "Rhomboid-related membrane protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694
GO:GO:0016021 GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936
EMBL:AE017180 GenomeReviews:AE017180_GR RefSeq:NP_952241.2
GeneID:2686772 KEGG:gsu:GSU1188 PATRIC:22025148
HOGENOM:HOG000011961 BioCyc:GSUL243231:GH27-1181-MONOMER
Uniprot:Q74DX7
Length = 279
Score = 137 (53.3 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 36/129 (27%), Positives = 60/129 (46%)
Query: 152 QDKLLLWGAKINSLIDK-GQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRY 210
++ LLL GA ID+ G+FW L ++ +LH + H+ N +L I P + + G R
Sbjct: 88 RNSLLLLGATGVVPIDRFGRFWTLLSANYLHGGLLHIFFNMMALRQIAPLVAREYGTWRM 147
Query: 211 LGVYFSSAIASSAMSYRFCNSPAVGASGAIFGLVGSFAVFIMRHRNILGGG--KEELQHL 268
+Y +A +SY +GAS AI L+GS + + G KE +
Sbjct: 148 FSIYTLGGVAGYVVSYLAGTGYTIGASCAICALIGSLLYYGKSRGGLYGQAVFKEVWGWV 207
Query: 269 AKVIIFNMV 277
+ +F ++
Sbjct: 208 VGLFLFGLI 216
Score = 46 (21.3 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 136 ILLAVNVLVYIAQFATQDK 154
I+LAVNV++Y+A ++
Sbjct: 55 IILAVNVVMYVASLLVDNR 73
>TIGR_CMR|GSU_1188 [details] [associations]
symbol:GSU_1188 "rhomboid family protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 EMBL:AE017180
GenomeReviews:AE017180_GR RefSeq:NP_952241.2 GeneID:2686772
KEGG:gsu:GSU1188 PATRIC:22025148 HOGENOM:HOG000011961
BioCyc:GSUL243231:GH27-1181-MONOMER Uniprot:Q74DX7
Length = 279
Score = 137 (53.3 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 36/129 (27%), Positives = 60/129 (46%)
Query: 152 QDKLLLWGAKINSLIDK-GQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRY 210
++ LLL GA ID+ G+FW L ++ +LH + H+ N +L I P + + G R
Sbjct: 88 RNSLLLLGATGVVPIDRFGRFWTLLSANYLHGGLLHIFFNMMALRQIAPLVAREYGTWRM 147
Query: 211 LGVYFSSAIASSAMSYRFCNSPAVGASGAIFGLVGSFAVFIMRHRNILGGG--KEELQHL 268
+Y +A +SY +GAS AI L+GS + + G KE +
Sbjct: 148 FSIYTLGGVAGYVVSYLAGTGYTIGASCAICALIGSLLYYGKSRGGLYGQAVFKEVWGWV 207
Query: 269 AKVIIFNMV 277
+ +F ++
Sbjct: 208 VGLFLFGLI 216
Score = 46 (21.3 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 136 ILLAVNVLVYIAQFATQDK 154
I+LAVNV++Y+A ++
Sbjct: 55 IILAVNVVMYVASLLVDNR 73
>TAIR|locus:2035190 [details] [associations]
symbol:RBL5 "RHOMBOID-like protein 5" species:3702
"Arabidopsis thaliana" [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR002610
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0006508 GO:GO:0004252
PANTHER:PTHR22936 EMBL:AC008016 eggNOG:COG0705 UniGene:At.37569
UniGene:At.37570 HOGENOM:HOG000239666 IPI:IPI00537566 PIR:E96566
RefSeq:NP_175667.1 ProteinModelPortal:Q9SSR0 MEROPS:S54.A01
EnsemblPlants:AT1G52580.1 GeneID:841690 KEGG:ath:AT1G52580
TAIR:At1g52580 InParanoid:Q9SSR0 OMA:MANMISL PhylomeDB:Q9SSR0
ProtClustDB:CLSN2679734 Genevestigator:Q9SSR0 Uniprot:Q9SSR0
Length = 309
Score = 146 (56.5 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 39/121 (32%), Positives = 61/121 (50%)
Query: 159 GAKINSLIDKGQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSA 218
GA L+++G+ WRL + +LH HLM N SL IG +E+ G R +Y S
Sbjct: 94 GALERRLVEEGERWRLISCIWLHGGFLHLMANMISLMCIGMRLEQEFGFMRIGALYVISG 153
Query: 219 IASSAMSYRFCNSP---AVGASGAIFGLVGSFAVFIMRHRNILGGGKEELQHLAKVIIFN 275
+ S +S + +VGASGA+FGL+G+ ++ + I L L +I+ N
Sbjct: 154 LGGSLVSCLTDSQGERVSVGASGALFGLLGAMLSELITNWTIYENKCTALMTLILIIVLN 213
Query: 276 M 276
+
Sbjct: 214 L 214
>TAIR|locus:2015193 [details] [associations]
symbol:RBL2 "RHOMBOID-like 2" species:3702 "Arabidopsis
thaliana" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0005794
GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 EMBL:AC010795
HOGENOM:HOG000239666 EMBL:BT004076 EMBL:BT005121 EMBL:AB195671
IPI:IPI00521870 PIR:F96656 RefSeq:NP_176500.1 UniGene:At.43734
ProteinModelPortal:Q9CAN1 IntAct:Q9CAN1 MEROPS:S54.015 PaxDb:Q9CAN1
PRIDE:Q9CAN1 EnsemblPlants:AT1G63120.1 GeneID:842616
KEGG:ath:AT1G63120 TAIR:At1g63120 eggNOG:KOG2289 InParanoid:Q9CAN1
OMA:ETHWTSW PhylomeDB:Q9CAN1 ProtClustDB:CLSN2914175
ArrayExpress:Q9CAN1 Genevestigator:Q9CAN1 Uniprot:Q9CAN1
Length = 317
Score = 144 (55.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 39/113 (34%), Positives = 59/113 (52%)
Query: 165 LIDKGQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAM 224
++ + Q WRL + +LHA I HL+ N SL IG +E+ G R +Y S + S +
Sbjct: 104 VVHEHQGWRLLSCMWLHAGIIHLLTNMLSLIFIGIRLEQQFGFIRVGLIYLISGLGGSIL 163
Query: 225 SYRFCN-SPAVGASGAIFGLVGSFAVFIMRHRNILGGGKEELQHLAKVIIFNM 276
S F S +VGASGA+FGL+G+ ++ + I L L +I N+
Sbjct: 164 SSLFLQESISVGASGALFGLLGAMLSELLTNWTIYANKAAALITLLFIIAINL 216
>GENEDB_PFALCIPARUM|PF11_0149 [details] [associations]
symbol:PF11_0149 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694
GO:GO:0016021 GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936
EMBL:AE014186 GenomeReviews:AE014186_GR RefSeq:XP_001347820.2
ProteinModelPortal:Q8IIM2 MEROPS:S54.018
EnsemblProtists:PF11_0149.1 GeneID:810696 KEGG:pfa:PF11_0149
EuPathDB:PlasmoDB:PF3D7_1114100.1 ProtClustDB:PTZ00101
Uniprot:Q8IIM2
Length = 278
Score = 139 (54.0 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 40/113 (35%), Positives = 60/113 (53%)
Query: 136 ILLAVNVLVYIAQFAT-QDKLLLW-GAKINSLIDKGQFWRLATSAFLHANIAHLMVNCYS 193
I+ ++V + A F T D LL+ GA + S I +G+ RL FLHANI H + N +
Sbjct: 65 IVFIISVSIKPADFLTPSDSLLVTLGANVASRIKQGEIHRLILPIFLHANIFHAIFNIFF 124
Query: 194 LNSIGPTMEKICGPRRYLGVYFSSAIASSAMSYRFCNSPA-VGASGAIFGLVG 245
+G T+EK G + + +YF + + + +S P VGAS + GLVG
Sbjct: 125 QLRMGFTLEKNYGIMKIIILYFVTGMYGNILSSSITYCPIKVGASTSGMGLVG 177
>UNIPROTKB|Q8IIM2 [details] [associations]
symbol:ROM1 "Rhomboid protease ROM1, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694
GO:GO:0016021 GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936
EMBL:AE014186 GenomeReviews:AE014186_GR RefSeq:XP_001347820.2
ProteinModelPortal:Q8IIM2 MEROPS:S54.018
EnsemblProtists:PF11_0149.1 GeneID:810696 KEGG:pfa:PF11_0149
EuPathDB:PlasmoDB:PF3D7_1114100.1 ProtClustDB:PTZ00101
Uniprot:Q8IIM2
Length = 278
Score = 139 (54.0 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 40/113 (35%), Positives = 60/113 (53%)
Query: 136 ILLAVNVLVYIAQFAT-QDKLLLW-GAKINSLIDKGQFWRLATSAFLHANIAHLMVNCYS 193
I+ ++V + A F T D LL+ GA + S I +G+ RL FLHANI H + N +
Sbjct: 65 IVFIISVSIKPADFLTPSDSLLVTLGANVASRIKQGEIHRLILPIFLHANIFHAIFNIFF 124
Query: 194 LNSIGPTMEKICGPRRYLGVYFSSAIASSAMSYRFCNSPA-VGASGAIFGLVG 245
+G T+EK G + + +YF + + + +S P VGAS + GLVG
Sbjct: 125 QLRMGFTLEKNYGIMKIIILYFVTGMYGNILSSSITYCPIKVGASTSGMGLVG 177
>TAIR|locus:2127258 [details] [associations]
symbol:RBL7 "RHOMBOID-like protein 7" species:3702
"Arabidopsis thaliana" [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR002610 InterPro:IPR022764
Pfam:PF01694 GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 EMBL:AL031018
EMBL:AL161558 eggNOG:COG0705 IPI:IPI00517113 PIR:T05139
RefSeq:NP_194038.1 UniGene:At.54485 ProteinModelPortal:O82756
MEROPS:S54.A03 EnsemblPlants:AT4G23070.1 GeneID:828406
KEGG:ath:AT4G23070 TAIR:At4g23070 HOGENOM:HOG000239666
InParanoid:O82756 OMA:SELLINW PhylomeDB:O82756
ProtClustDB:CLSN2916128 ArrayExpress:O82756 Genevestigator:O82756
Uniprot:O82756
Length = 313
Score = 140 (54.3 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 36/100 (36%), Positives = 53/100 (53%)
Query: 150 ATQDKL--LLWGAKINSLIDKGQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGP 207
+T +K+ L WG ++ K Q WRL T +LHA + HL+ N + IG +E+ G
Sbjct: 85 STLEKMGALAWG----KIVHKRQVWRLLTCMWLHAGVIHLLANMCCVAYIGVRLEQQFGF 140
Query: 208 RRYLGVYFSSAIASSAMSYRFCNSP-AVGASGAIFGLVGS 246
R +Y S S +S F +VGAS A+FGL+G+
Sbjct: 141 VRVGTIYLVSGFCGSILSCLFLEDAISVGASSALFGLLGA 180
>TAIR|locus:2066102 [details] [associations]
symbol:RBL1 "RHOMBOID-like 1" species:3702 "Arabidopsis
thaliana" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
GO:GO:0005794 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 eggNOG:NOG282167
HOGENOM:HOG000239666 EMBL:AK228551 IPI:IPI00548534
RefSeq:NP_180469.3 UniGene:At.47832 ProteinModelPortal:Q0WQX7
MEROPS:S54.A05 PaxDb:Q0WQX7 PRIDE:Q0WQX7 EnsemblPlants:AT2G29050.1
GeneID:817453 KEGG:ath:AT2G29050 TAIR:At2g29050 InParanoid:Q0WQX7
OMA:WINQKAC PhylomeDB:Q0WQX7 ProtClustDB:CLSN2918679
ArrayExpress:Q0WQX7 Genevestigator:Q0WQX7 Uniprot:Q0WQX7
Length = 389
Score = 139 (54.0 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 37/116 (31%), Positives = 60/116 (51%)
Query: 162 INSLIDKGQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIAS 221
++ ++ K + WRL T +LHA + H++ N SL IG +E+ G R +Y S
Sbjct: 120 VSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGLLYMISGFGG 179
Query: 222 SAMSYRFCNSP-AVGASGAIFGLVGSFAVFIMRHRNILGGGKEELQHLAKVIIFNM 276
S +S F + +VGASGA+FGL+G+ ++ + I L L +I N+
Sbjct: 180 SLLSSLFNRAGISVGASGALFGLLGAMLSELLTNWTIYANKFAALLTLIFIIAINL 235
>UNIPROTKB|Q97NE9 [details] [associations]
symbol:SP_2094 "Putative uncharacterized protein"
species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002610
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 EMBL:AE005672
GenomeReviews:AE005672_GR KO:K01362 PIR:H95244 RefSeq:NP_346513.1
ProteinModelPortal:Q97NE9 EnsemblBacteria:EBSTRT00000025202
GeneID:931960 KEGG:spn:SP_2094 PATRIC:19708775 HOGENOM:HOG000235153
OMA:GIMHIAS ProtClustDB:CLSK884194 Uniprot:Q97NE9
Length = 225
Score = 131 (51.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 38/131 (29%), Positives = 63/131 (48%)
Query: 134 TNILLAVNVLVYIAQFATQ-------DKLLLWGAKINSLID--KGQFWRLATSAFLHANI 184
T+ L V LV++ T D L +GA I Q WRL ++ F+H
Sbjct: 12 TSFFLLVTALVFLLMLVTAGGNFDRADTLFRFGAMYGPAIRLFPEQVWRLLSAIFVHIGW 71
Query: 185 AHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAMSYRFC-NSPAVGASGAIFGL 243
H +VN SL +G +E+I G +++ +Y S + + + F S A GAS +++GL
Sbjct: 72 EHFIVNMLSLYYLGRQVEEIFGSKQFFFLYLLSGMMGNLFVFVFSPKSLAAGASTSLYGL 131
Query: 244 VGSFAVFIMRH 254
A+ ++R+
Sbjct: 132 FA--AIIVLRY 140
>TAIR|locus:2084465 [details] [associations]
symbol:RBL4 "RHOMBOID-like protein 4" species:3702
"Arabidopsis thaliana" [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR002610
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0005886
GO:GO:0009506 EMBL:CP002686 GO:GO:0006508 GO:GO:0004252
PANTHER:PTHR22936 IPI:IPI00518159 RefSeq:NP_850698.1
UniGene:At.19072 ProteinModelPortal:F4JBM4 MEROPS:S54.A06
PRIDE:F4JBM4 EnsemblPlants:AT3G53780.2 GeneID:824545
KEGG:ath:AT3G53780 OMA:GIRMERE Uniprot:F4JBM4
Length = 394
Score = 135 (52.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 34/96 (35%), Positives = 51/96 (53%)
Query: 159 GAKINSLIDKGQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSA 218
G + ++ + WRL + +LH + HL++N +L IG ME+ G R +Y S
Sbjct: 127 GLDVKKVVKGDEGWRLLSCNWLHGGVVHLLMNMLTLLFIGIRMEREFGFIRIGLLYLISG 186
Query: 219 IASSAMSYRFCNSP-AVGASGAIFGLVGSFA--VFI 251
S +S F S +VGASGA+FGL+G +FI
Sbjct: 187 FGGSILSALFLRSNISVGASGAVFGLLGGMLSEIFI 222
>UNIPROTKB|Q3ZA67 [details] [associations]
symbol:DET0132 "Rhomboid family protein" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0705 HOGENOM:HOG000229238
RefSeq:YP_180882.1 ProteinModelPortal:Q3ZA67 STRING:Q3ZA67
GeneID:3230502 KEGG:det:DET0132 PATRIC:21607353 OMA:HANITHL
ProtClustDB:CLSK837606 BioCyc:DETH243164:GJNF-132-MONOMER
Uniprot:Q3ZA67
Length = 190
Score = 125 (49.1 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 28/82 (34%), Positives = 46/82 (56%)
Query: 172 WRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAMSYRFCNS 231
W + TS F+HAN+ HL N +L G + ++ R +L ++F +A S + + N+
Sbjct: 49 WTILTSLFVHANLWHLFANMLTLYFFGNALLQMVSQRSWLIIFFGGGLAGSLL-FILLNA 107
Query: 232 PA----VGASGAIFGLVGSFAV 249
+ +GASGA+F L G+ AV
Sbjct: 108 GSYGYVIGASGAVFALGGALAV 129
>TIGR_CMR|DET_0132 [details] [associations]
symbol:DET_0132 "rhomboid family protein" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=ISS] InterPro:IPR002610
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0705 HOGENOM:HOG000229238
RefSeq:YP_180882.1 ProteinModelPortal:Q3ZA67 STRING:Q3ZA67
GeneID:3230502 KEGG:det:DET0132 PATRIC:21607353 OMA:HANITHL
ProtClustDB:CLSK837606 BioCyc:DETH243164:GJNF-132-MONOMER
Uniprot:Q3ZA67
Length = 190
Score = 125 (49.1 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 28/82 (34%), Positives = 46/82 (56%)
Query: 172 WRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAMSYRFCNS 231
W + TS F+HAN+ HL N +L G + ++ R +L ++F +A S + + N+
Sbjct: 49 WTILTSLFVHANLWHLFANMLTLYFFGNALLQMVSQRSWLIIFFGGGLAGSLL-FILLNA 107
Query: 232 PA----VGASGAIFGLVGSFAV 249
+ +GASGA+F L G+ AV
Sbjct: 108 GSYGYVIGASGAVFALGGALAV 129
>TAIR|locus:2195067 [details] [associations]
symbol:RBL6 "RHOMBOID-like protein 6" species:3702
"Arabidopsis thaliana" [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR002610 InterPro:IPR022764
Pfam:PF01694 GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 eggNOG:COG0705
HOGENOM:HOG000239666 EMBL:AY065251 EMBL:AY091318 IPI:IPI00538843
RefSeq:NP_001077528.1 RefSeq:NP_001184975.1 RefSeq:NP_172735.1
UniGene:At.28545 ProteinModelPortal:Q8VZ48 IntAct:Q8VZ48
STRING:Q8VZ48 MEROPS:S54.A04 PaxDb:Q8VZ48 PRIDE:Q8VZ48
EnsemblPlants:AT1G12750.1 EnsemblPlants:AT1G12750.2
EnsemblPlants:AT1G12750.3 GeneID:837831 KEGG:ath:AT1G12750
TAIR:At1g12750 InParanoid:Q8VZ48 PhylomeDB:Q8VZ48
ProtClustDB:CLSN2682464 ArrayExpress:Q8VZ48 Genevestigator:Q8VZ48
Uniprot:Q8VZ48
Length = 307
Score = 126 (49.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 30/83 (36%), Positives = 47/83 (56%)
Query: 165 LIDKGQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAM 224
++ + WRL T+ +LHA I HL++N + + G +E+ G R +Y S S +
Sbjct: 91 VVQGNEKWRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSIL 150
Query: 225 SYRFCN-SPAVGASGAIFGLVGS 246
S F S +VGASGA+ GL+G+
Sbjct: 151 SALFLQKSISVGASGALLGLMGA 173
>UNIPROTKB|I3LRY0 [details] [associations]
symbol:RHBDL3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] InterPro:IPR002610
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 GeneTree:ENSGT00390000005726
EMBL:CU640398 EMBL:CU463935 Ensembl:ENSSSCT00000023363 OMA:LAQIAVY
Uniprot:I3LRY0
Length = 231
Score = 123 (48.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 28/80 (35%), Positives = 42/80 (52%)
Query: 168 KGQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASS-AMSY 226
+ Q WR T F+HA I HL +N +G +E + G R VY + +A S A+S
Sbjct: 35 RAQAWRFLTYIFMHAGIEHLGLNVVLQLLVGVPLEMVHGATRIGLVYLAGVVAGSLAVSV 94
Query: 227 RFCNSPAVGASGAIFGLVGS 246
+P VG+SG ++ LV +
Sbjct: 95 ADMTAPVVGSSGGVYALVSA 114
>UNIPROTKB|Q3ADW0 [details] [associations]
symbol:CHY_0820 "Rhomboid family protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694
GO:GO:0016021 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 eggNOG:COG0705 RefSeq:YP_359674.1
ProteinModelPortal:Q3ADW0 STRING:Q3ADW0 GeneID:3728101
KEGG:chy:CHY_0820 PATRIC:21274774 HOGENOM:HOG000229238 OMA:ARCAHND
BioCyc:CHYD246194:GJCN-820-MONOMER Uniprot:Q3ADW0
Length = 236
Score = 123 (48.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 174 LATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAMSYRF---CN 230
L TS FLH + HL+ N ++L G +E+ G ++L YF S I + Y F +
Sbjct: 72 LFTSMFLHGSFIHLISNMWALWLFGDNVEERMGHLKFLLFYFLSGIVAMTAHYVFNFASD 131
Query: 231 SPAVGASGAIFGLVGSFAV 249
AVGASGAI G++G++ V
Sbjct: 132 IVAVGASGAIAGVMGAYFV 150
>TIGR_CMR|CHY_0820 [details] [associations]
symbol:CHY_0820 "rhomboid family protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006508 GO:GO:0004252
PANTHER:PTHR22936 eggNOG:COG0705 RefSeq:YP_359674.1
ProteinModelPortal:Q3ADW0 STRING:Q3ADW0 GeneID:3728101
KEGG:chy:CHY_0820 PATRIC:21274774 HOGENOM:HOG000229238 OMA:ARCAHND
BioCyc:CHYD246194:GJCN-820-MONOMER Uniprot:Q3ADW0
Length = 236
Score = 123 (48.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 174 LATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAMSYRF---CN 230
L TS FLH + HL+ N ++L G +E+ G ++L YF S I + Y F +
Sbjct: 72 LFTSMFLHGSFIHLISNMWALWLFGDNVEERMGHLKFLLFYFLSGIVAMTAHYVFNFASD 131
Query: 231 SPAVGASGAIFGLVGSFAV 249
AVGASGAI G++G++ V
Sbjct: 132 IVAVGASGAIAGVMGAYFV 150
>UNIPROTKB|Q482Z4 [details] [associations]
symbol:CPS_2148 "Membrane protein, Rhomboid family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
GO:GO:0004252 EMBL:CP000083 GenomeReviews:CP000083_GR
eggNOG:COG0705 RefSeq:YP_268873.1 ProteinModelPortal:Q482Z4
STRING:Q482Z4 GeneID:3523293 KEGG:cps:CPS_2148 PATRIC:21467413
HOGENOM:HOG000276313 OMA:HWHLLMN ProtClustDB:CLSK768093
BioCyc:CPSY167879:GI48-2218-MONOMER InterPro:IPR023826
TIGRFAMs:TIGR03902 Uniprot:Q482Z4
Length = 206
Score = 120 (47.3 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 38/138 (27%), Positives = 65/138 (47%)
Query: 126 NLFIGRQWTNILLAVNVLVYIAQFATQDKLLLWGAKINSLIDKGQFWRLATSAFLHANIA 185
NL + +Q + ++ + +L +A F L+ + LI +G+ WR T F H N
Sbjct: 7 NLPLKKQHSMLVTIIAILAILAYFFNDAVSELFVYQYQ-LISQGELWRTFTGHFFHTNGF 65
Query: 186 HLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAMSYRFCNSPA----VGASGAIF 241
HL++N +L + + Y ++ +SA+ SA Y F SP VG SG +
Sbjct: 66 HLLLNLAALALLWALHGHFYNVKSYSLLFITSALTCSAGMYFF--SPEIRQYVGLSGVLH 123
Query: 242 GLVGSFAVFIMRHRNILG 259
G+ A+ +RH++ G
Sbjct: 124 GIFVFGAIMDIRHKDKTG 141
>TIGR_CMR|CPS_2148 [details] [associations]
symbol:CPS_2148 "membrane protein, Rhomboid family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0004252
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0705
RefSeq:YP_268873.1 ProteinModelPortal:Q482Z4 STRING:Q482Z4
GeneID:3523293 KEGG:cps:CPS_2148 PATRIC:21467413
HOGENOM:HOG000276313 OMA:HWHLLMN ProtClustDB:CLSK768093
BioCyc:CPSY167879:GI48-2218-MONOMER InterPro:IPR023826
TIGRFAMs:TIGR03902 Uniprot:Q482Z4
Length = 206
Score = 120 (47.3 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 38/138 (27%), Positives = 65/138 (47%)
Query: 126 NLFIGRQWTNILLAVNVLVYIAQFATQDKLLLWGAKINSLIDKGQFWRLATSAFLHANIA 185
NL + +Q + ++ + +L +A F L+ + LI +G+ WR T F H N
Sbjct: 7 NLPLKKQHSMLVTIIAILAILAYFFNDAVSELFVYQYQ-LISQGELWRTFTGHFFHTNGF 65
Query: 186 HLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAMSYRFCNSPA----VGASGAIF 241
HL++N +L + + Y ++ +SA+ SA Y F SP VG SG +
Sbjct: 66 HLLLNLAALALLWALHGHFYNVKSYSLLFITSALTCSAGMYFF--SPEIRQYVGLSGVLH 123
Query: 242 GLVGSFAVFIMRHRNILG 259
G+ A+ +RH++ G
Sbjct: 124 GIFVFGAIMDIRHKDKTG 141
>SGD|S000003333 [details] [associations]
symbol:PCP1 "Mitochondrial serine protease" species:4932
"Saccharomyces cerevisiae" [GO:0005743 "mitochondrial inner
membrane" evidence=IEA;IDA] [GO:0016021 "integral to membrane"
evidence=ISM;IEA] [GO:0006465 "signal peptide processing"
evidence=IMP] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA;IMP] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0010821 "regulation of mitochondrion
organization" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008236 "serine-type peptidase activity" evidence=IEA]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 SGD:S000003333
GO:GO:0016021 EMBL:BK006941 GO:GO:0005743 GO:GO:0006508
BRENDA:3.4.21.105 GO:GO:0004252 PANTHER:PTHR22936 GO:GO:0006465
GO:GO:0010821 eggNOG:COG0705 GeneTree:ENSGT00390000013063 KO:K09650
EMBL:Z72886 PIR:S64406 RefSeq:NP_011615.1 ProteinModelPortal:P53259
DIP:DIP-5524N IntAct:P53259 MINT:MINT-518042 STRING:P53259
MEROPS:S54.007 EnsemblFungi:YGR101W GeneID:852993 KEGG:sce:YGR101W
CYGD:YGR101w HOGENOM:HOG000000958 OMA:TIISESR OrthoDB:EOG4K0TZ8
NextBio:972824 Genevestigator:P53259 GermOnline:YGR101W
Uniprot:P53259
Length = 346
Score = 125 (49.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 31/89 (34%), Positives = 48/89 (53%)
Query: 177 SAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAMSYRFCN------ 230
SAF H HL +N +L S G ++ + G + +Y +SAIA S S +
Sbjct: 189 SAFSHQEFWHLGMNMLALWSFGTSLATMLGASNFFSLYMNSAIAGSLFSLWYPKLARLAI 248
Query: 231 -SPAVGASGAIFGLVGSFAVFIMRHRNIL 258
P++GASGA+FG++G F+ ++ H IL
Sbjct: 249 VGPSLGASGALFGVLGCFS-YLFPHAKIL 276
>UNIPROTKB|F1NQJ7 [details] [associations]
symbol:RHBDL3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR002048 InterPro:IPR002610
InterPro:IPR011992 InterPro:IPR017213 InterPro:IPR022764
Pfam:PF01694 Pfam:PF13499 PIRSF:PIRSF037470 PROSITE:PS50222
Prosite:PS00018 GO:GO:0016021 GO:GO:0006508 GO:GO:0005509
Gene3D:1.10.238.10 InterPro:IPR018247 GO:GO:0004252
PANTHER:PTHR22936 GeneTree:ENSGT00390000005726 OMA:MVHGAAR
EMBL:AADN02030011 IPI:IPI00591933 Ensembl:ENSGALT00000005419
Uniprot:F1NQJ7
Length = 360
Score = 124 (48.7 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 28/80 (35%), Positives = 42/80 (52%)
Query: 168 KGQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASS-AMSY 226
+ Q WR T F+HA I HL +N +G +E + G R VY + +A S A+S
Sbjct: 164 RAQAWRYLTYIFMHAGIEHLGLNVVLQLLVGVPLEMVHGAARISFVYVAGVVAGSLAVSV 223
Query: 227 RFCNSPAVGASGAIFGLVGS 246
+P VG+SG ++ LV +
Sbjct: 224 ADMTAPVVGSSGGVYALVSA 243
>UNIPROTKB|Q495Y4 [details] [associations]
symbol:RHBDL3 "cDNA FLJ42579 fis, clone BRACE3008384,
highly similar to Rhomboid-related protein 4 (EC 3.4.21.105)"
species:9606 "Homo sapiens" [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR002610
InterPro:IPR017213 InterPro:IPR022764 Pfam:PF01694
PIRSF:PIRSF037470 GO:GO:0016021 GO:GO:0006508 GO:GO:0004252
PANTHER:PTHR22936 HOVERGEN:HBG059476 KO:K02857 EMBL:AC026620
RefSeq:NP_612201.1 UniGene:Hs.655027 GeneID:162494 KEGG:hsa:162494
CTD:162494 HGNC:HGNC:16502 PharmGKB:PA34384 ChiTaRS:RHBDL3
GenomeRNAi:162494 NextBio:88181 OMA:MVHGAAR EMBL:AC005899
EMBL:BC100978 EMBL:AK124570 IPI:IPI01013386
ProteinModelPortal:Q495Y4 Ensembl:ENST00000536287
ArrayExpress:Q495Y4 Bgee:Q495Y4 Uniprot:Q495Y4
Length = 306
Score = 122 (48.0 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 28/80 (35%), Positives = 42/80 (52%)
Query: 168 KGQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASS-AMSY 226
+ Q WR T F+HA I HL +N +G +E + G R VY + +A S A+S
Sbjct: 110 RAQVWRYLTYIFMHAGIEHLGLNVVLQLLVGVPLEMVHGATRIGLVYVAGVVAGSLAVSV 169
Query: 227 RFCNSPAVGASGAIFGLVGS 246
+P VG+SG ++ LV +
Sbjct: 170 ADMTAPVVGSSGGVYALVSA 189
>TIGR_CMR|SPO_3011 [details] [associations]
symbol:SPO_3011 "peptidase, S54 (rhomboid) family"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004252 "serine-type
endopeptidase activity" evidence=ISS] [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0006464 "cellular protein
modification process" evidence=ISS] InterPro:IPR002610
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006508 GO:GO:0004252
PANTHER:PTHR22936 HOGENOM:HOG000229238 RefSeq:YP_168215.1
ProteinModelPortal:Q5LP41 MEROPS:S54.027 GeneID:3195499
KEGG:sil:SPO3011 PATRIC:23379459 OMA:PFEILTF ProtClustDB:CLSK934025
Uniprot:Q5LP41
Length = 247
Score = 120 (47.3 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 40/130 (30%), Positives = 58/130 (44%)
Query: 136 ILLAVNVLVYIAQFATQDKLLLWG------AKINSLIDKGQFWR-LATSAFLHANIAHLM 188
+LLA N+ +++A D L G A I + I G W+ L TS FLH HL
Sbjct: 19 LLLAANIAIFLATLGIMDDPRLIGRFYYDYAIIPARISDGDGWQTLVTSIFLHGGWMHLG 78
Query: 189 VNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASS---AMSYRFCNSPAVGASGAIFGLVG 245
N L G +E G + Y ++ I + +S P +GASGAI G++G
Sbjct: 79 GNMLFLWIFGDNLEDEMGHLGFALFYLAAGIGAGLIHVLSGPGSMVPTIGASGAIAGVMG 138
Query: 246 SFAVFIMRHR 255
+ + R R
Sbjct: 139 GYLLLFPRAR 148
>WB|WBGene00004404 [details] [associations]
symbol:rom-5 species:6239 "Caenorhabditis elegans"
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR022764
Pfam:PF01694 GO:GO:0016021 GO:GO:0004252 EMBL:FO081614
GeneTree:ENSGT00390000013063 eggNOG:NOG259765 RefSeq:NP_491125.4
EnsemblMetazoa:Y54E10A.14 GeneID:190260 KEGG:cel:CELE_Y54E10A.14
UCSC:Y54E10A.14 CTD:190260 WormBase:Y54E10A.14 HOGENOM:HOG000020480
InParanoid:Q9N3E5 OMA:FAPHIIE Uniprot:Q9N3E5
Length = 325
Score = 122 (48.0 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 37/117 (31%), Positives = 58/117 (49%)
Query: 130 GRQWTNILLAVNVLVYIAQFATQDKLLLWGAKINSLIDKGQFWRLATSAFLHANIAHLMV 189
G + +L+ +NV+VY+ + NS K + SAF H++I HL +
Sbjct: 117 GEKHLALLIGLNVVVYLMWKGKSLNPFMTRYFTNSYASKSLCSPMLLSAFSHSSIIHLGL 176
Query: 190 NCYSLNSIGP-TMEKICGPRRYLGVYFSSAIASSAMSY---RFCNSP--AVGASGAI 240
N Y L++ P +EK G ++ Y ++A+ SS +S SP A+GASGAI
Sbjct: 177 NMYVLSTFAPHIIEKFMGVEQFWSFYVTAAVVSSFVSIVDKAVVRSPIRALGASGAI 233
>UNIPROTKB|F1PPT6 [details] [associations]
symbol:RHBDL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] InterPro:IPR002610
InterPro:IPR017213 InterPro:IPR022764 Pfam:PF01694
PIRSF:PIRSF037470 GO:GO:0016021 GO:GO:0006508 GO:GO:0004252
PANTHER:PTHR22936 GeneTree:ENSGT00390000005726 OMA:MVHGAAR
EMBL:AAEX03006642 Ensembl:ENSCAFT00000029252 Uniprot:F1PPT6
Length = 306
Score = 121 (47.7 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 28/80 (35%), Positives = 42/80 (52%)
Query: 168 KGQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASS-AMSY 226
+ Q WR T F+HA I HL +N +G +E + G R VY + +A S A+S
Sbjct: 110 RAQAWRYLTYIFMHAGIEHLGLNVVLQLLVGVPLEMVHGATRIGLVYVAGVVAGSLAVSV 169
Query: 227 RFCNSPAVGASGAIFGLVGS 246
+P VG+SG ++ LV +
Sbjct: 170 ADMTAPVVGSSGGVYALVSA 189
>UNIPROTKB|Q9KQL7 [details] [associations]
symbol:VC_1981 "Putative uncharacterized protein"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0004252 OMA:HWHLLMN
InterPro:IPR023826 TIGRFAMs:TIGR03902 PIR:D82132 RefSeq:NP_231615.1
ProteinModelPortal:Q9KQL7 DNASU:2613485 GeneID:2613485
KEGG:vch:VC1981 PATRIC:20082998 ProtClustDB:CLSK874623
Uniprot:Q9KQL7
Length = 222
Score = 117 (46.2 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 38/119 (31%), Positives = 58/119 (48%)
Query: 136 ILLAVNVLVYIAQFATQDKLLLWGAKINSLIDKGQFWRLATSAFLHANIAHLMVNCYSLN 195
+LLA+++L Q+ +L LW S I++GQ+WR+ T F H N AH +N +L
Sbjct: 45 LLLAISLLSLSLQWPPLHELTLWHF---SAIEQGQWWRILTGNFAHTNFAHWAMNLAALW 101
Query: 196 SIG----PTMEKICGPRRYLGVYFSSAIASSAM-SYRFCNSPAVGASGAIFGLVGSFAV 249
I PT ++ P + + I +S M SY VG SG + GL +A+
Sbjct: 102 IISFVFKPTARQLLIPLLLISLAVGVMILASDMQSY-------VGLSGTLHGLFAYYAL 153
>TIGR_CMR|VC_1981 [details] [associations]
symbol:VC_1981 "hypothetical protein" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR022764
Pfam:PF01694 GO:GO:0016021 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0004252 OMA:HWHLLMN InterPro:IPR023826 TIGRFAMs:TIGR03902
PIR:D82132 RefSeq:NP_231615.1 ProteinModelPortal:Q9KQL7
DNASU:2613485 GeneID:2613485 KEGG:vch:VC1981 PATRIC:20082998
ProtClustDB:CLSK874623 Uniprot:Q9KQL7
Length = 222
Score = 117 (46.2 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 38/119 (31%), Positives = 58/119 (48%)
Query: 136 ILLAVNVLVYIAQFATQDKLLLWGAKINSLIDKGQFWRLATSAFLHANIAHLMVNCYSLN 195
+LLA+++L Q+ +L LW S I++GQ+WR+ T F H N AH +N +L
Sbjct: 45 LLLAISLLSLSLQWPPLHELTLWHF---SAIEQGQWWRILTGNFAHTNFAHWAMNLAALW 101
Query: 196 SIG----PTMEKICGPRRYLGVYFSSAIASSAM-SYRFCNSPAVGASGAIFGLVGSFAV 249
I PT ++ P + + I +S M SY VG SG + GL +A+
Sbjct: 102 IISFVFKPTARQLLIPLLLISLAVGVMILASDMQSY-------VGLSGTLHGLFAYYAL 153
>UNIPROTKB|Q495Y5 [details] [associations]
symbol:RHBDL3 "RHBDL3 protein" species:9606 "Homo sapiens"
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR002610 InterPro:IPR011992
InterPro:IPR017213 InterPro:IPR022764 Pfam:PF01694
PIRSF:PIRSF037470 GO:GO:0016021 GO:GO:0006508 GO:GO:0005509
Gene3D:1.10.238.10 GO:GO:0004252 PANTHER:PTHR22936
HOVERGEN:HBG059476 EMBL:AC026620 UniGene:Hs.655027 HGNC:HGNC:16502
ChiTaRS:RHBDL3 EMBL:AC005899 EMBL:BC100977 IPI:IPI01015552
SMR:Q495Y5 Ensembl:ENST00000538145 UCSC:uc010csw.1 Uniprot:Q495Y5
Length = 396
Score = 122 (48.0 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 28/80 (35%), Positives = 42/80 (52%)
Query: 168 KGQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASS-AMSY 226
+ Q WR T F+HA I HL +N +G +E + G R VY + +A S A+S
Sbjct: 200 RAQVWRYLTYIFMHAGIEHLGLNVVLQLLVGVPLEMVHGATRIGLVYVAGVVAGSLAVSV 259
Query: 227 RFCNSPAVGASGAIFGLVGS 246
+P VG+SG ++ LV +
Sbjct: 260 ADMTAPVVGSSGGVYALVSA 279
>UNIPROTKB|P58872 [details] [associations]
symbol:RHBDL3 "Rhomboid-related protein 3" species:9606
"Homo sapiens" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR002048 InterPro:IPR002610
InterPro:IPR011992 InterPro:IPR017213 InterPro:IPR022764
Pfam:PF01694 Pfam:PF13499 PIRSF:PIRSF037470 PROSITE:PS50222
GO:GO:0016021 GO:GO:0006508 GO:GO:0005509 Gene3D:1.10.238.10
GO:GO:0004252 PANTHER:PTHR22936 eggNOG:NOG300180
HOGENOM:HOG000231407 HOVERGEN:HBG059476 KO:K02857 EMBL:AJ313480
EMBL:AC026620 EMBL:BC100975 IPI:IPI00293629 RefSeq:NP_612201.1
UniGene:Hs.655027 ProteinModelPortal:P58872 SMR:P58872
MEROPS:S54.006 PhosphoSite:P58872 DMDM:21542300 PRIDE:P58872
Ensembl:ENST00000269051 GeneID:162494 KEGG:hsa:162494
UCSC:uc002hhe.1 CTD:162494 GeneCards:GC17P030593 HGNC:HGNC:16502
neXtProt:NX_P58872 PharmGKB:PA34384 InParanoid:P58872
ChiTaRS:RHBDL3 GenomeRNAi:162494 NextBio:88181 ArrayExpress:P58872
Bgee:P58872 CleanEx:HS_RHBDL3 Genevestigator:P58872
GermOnline:ENSG00000141314 Uniprot:P58872
Length = 404
Score = 122 (48.0 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 28/80 (35%), Positives = 42/80 (52%)
Query: 168 KGQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASS-AMSY 226
+ Q WR T F+HA I HL +N +G +E + G R VY + +A S A+S
Sbjct: 208 RAQVWRYLTYIFMHAGIEHLGLNVVLQLLVGVPLEMVHGATRIGLVYVAGVVAGSLAVSV 267
Query: 227 RFCNSPAVGASGAIFGLVGS 246
+P VG+SG ++ LV +
Sbjct: 268 ADMTAPVVGSSGGVYALVSA 287
>UNIPROTKB|P09391 [details] [associations]
symbol:glpG "intramembrane serine protease GlpG"
species:83333 "Escherichia coli K-12" [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008236 "serine-type peptidase activity"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] HAMAP:MF_01594
InterPro:IPR002610 InterPro:IPR022732 InterPro:IPR022764
InterPro:IPR023662 Pfam:PF01694 Pfam:PF12122 GO:GO:0016021
GO:GO:0005886 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006508 EMBL:U18997 BRENDA:3.4.21.105
GO:GO:0004252 GO:GO:0008236 PANTHER:PTHR22936 EMBL:M96795
EMBL:M54940 EMBL:X07520 PIR:C65138 RefSeq:YP_026220.1
RefSeq:YP_492009.1 PDB:2IC8 PDB:2IRV PDB:2LEP PDB:2NRF PDB:2O7L
PDB:2XOV PDB:2XOW PDB:2XTU PDB:2XTV PDB:3B44 PDB:3B45 PDB:3TXT
PDB:3UBB PDBsum:2IC8 PDBsum:2IRV PDBsum:2LEP PDBsum:2NRF
PDBsum:2O7L PDBsum:2XOV PDBsum:2XOW PDBsum:2XTU PDBsum:2XTV
PDBsum:3B44 PDBsum:3B45 PDBsum:3TXT PDBsum:3UBB
ProteinModelPortal:P09391 SMR:P09391 MEROPS:S54.016 PRIDE:P09391
EnsemblBacteria:EBESCT00000001076 EnsemblBacteria:EBESCT00000001077
EnsemblBacteria:EBESCT00000017442 GeneID:12933111 GeneID:947936
KEGG:ecj:Y75_p3753 KEGG:eco:b3424 PATRIC:32122284 EchoBASE:EB0392
EcoGene:EG10397 eggNOG:COG0705 HOGENOM:HOG000269640 KO:K02441
OMA:WYLGGKI ProtClustDB:PRK10907 BioCyc:EcoCyc:EG10397-MONOMER
BioCyc:ECOL316407:JW5687-MONOMER BioCyc:MetaCyc:EG10397-MONOMER
EvolutionaryTrace:P09391 Genevestigator:P09391 TIGRFAMs:TIGR04239
Uniprot:P09391
Length = 276
Score = 119 (46.9 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 31/113 (27%), Positives = 56/113 (49%)
Query: 134 TNILLAVNVLVYIA-QFATQDKLLLWGAKINSLIDKGQFWRLATSAFLHANIAHLMVNCY 192
T +++ V+V+IA Q +++LW A K +FWR T A +H ++ H++ N
Sbjct: 97 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 193 SLNSIGPTMEKICGPRRYLGVYFSSAIASSAMSYRFCNSPAVGASGAIFGLVG 245
+G +EK G + + + SA+ S + +F G SG ++ L+G
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPWFGGLSGVVYALMG 209
>UNIPROTKB|Q604D0 [details] [associations]
symbol:MCA2616 "Rhomboid family protein" species:243233
"Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694
GO:GO:0016021 GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936
EMBL:AE017282 GenomeReviews:AE017282_GR HOGENOM:HOG000229238
MEROPS:S54.027 RefSeq:YP_115020.1 ProteinModelPortal:Q604D0
GeneID:3104547 KEGG:mca:MCA2616 PATRIC:22609094 OMA:GGVMGAY
ProtClustDB:CLSK931543 Uniprot:Q604D0
Length = 253
Score = 118 (46.6 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 28/80 (35%), Positives = 41/80 (51%)
Query: 172 WRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAMSYRF--- 228
W L T FLH H++ N + L G +E GP R++ Y +A++A
Sbjct: 81 WTLVTHMFLHGGWFHIIGNMWFLWVFGDNVEDAMGPLRFVAFYVLCGLAAAAAQIASDPG 140
Query: 229 CNSPAVGASGAIFGLVGSFA 248
P VGASGAI G++G++A
Sbjct: 141 AAVPMVGASGAIGGVMGAYA 160
>UNIPROTKB|F1MBG2 [details] [associations]
symbol:RHBDL3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] InterPro:IPR002610 InterPro:IPR011992
InterPro:IPR017213 InterPro:IPR022764 Pfam:PF01694
PIRSF:PIRSF037470 GO:GO:0016021 GO:GO:0006508 GO:GO:0005509
Gene3D:1.10.238.10 GO:GO:0004252 PANTHER:PTHR22936
GeneTree:ENSGT00390000005726 OMA:MVHGAAR EMBL:DAAA02048512
IPI:IPI01001464 Ensembl:ENSBTAT00000027954 Uniprot:F1MBG2
Length = 381
Score = 121 (47.7 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 28/80 (35%), Positives = 42/80 (52%)
Query: 168 KGQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASS-AMSY 226
+ Q WR T F+HA I HL +N +G +E + G R VY + +A S A+S
Sbjct: 185 RAQAWRYLTYIFMHAGIEHLGLNVVLQLLVGVPLEMVHGATRIGLVYVAGVVAGSLAVSV 244
Query: 227 RFCNSPAVGASGAIFGLVGS 246
+P VG+SG ++ LV +
Sbjct: 245 ADMTAPVVGSSGGVYALVSA 264
>CGD|CAL0000015 [details] [associations]
symbol:orf19.1643 species:5476 "Candida albicans" [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0010821
"regulation of mitochondrion organization" evidence=IEA]
[GO:0006465 "signal peptide processing" evidence=IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 CGD:CAL0000015
GO:GO:0016021 GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936
EMBL:AACQ01000013 KO:K09650 HOGENOM:HOG000000958 RefSeq:XP_721720.1
ProteinModelPortal:Q5AJS7 STRING:Q5AJS7 GeneID:3636580
KEGG:cal:CaO19.1643 Uniprot:Q5AJS7
Length = 327
Score = 117 (46.2 bits), Expect = 0.00018, P = 0.00018
Identities = 30/84 (35%), Positives = 42/84 (50%)
Query: 172 WRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAMSYR---F 228
W L SAF H + AH +N + S G T+ G + +Y +SA+ SS S F
Sbjct: 167 WTLLGSAFSHQSFAHFFINMLAFQSFGSTLVAFLGVSNFTIMYLNSAVISSFASLAIPMF 226
Query: 229 CNSP----AVGASGAIFGLVGSFA 248
S ++GASGAIF + G F+
Sbjct: 227 LGSSLSVASLGASGAIFSVFGVFS 250
>ZFIN|ZDB-GENE-050417-2 [details] [associations]
symbol:rhbdl3 "rhomboid, veinlet-like 3 (Drosophila)"
species:7955 "Danio rerio" [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] InterPro:IPR002048
InterPro:IPR002610 InterPro:IPR011992 InterPro:IPR017213
InterPro:IPR022764 Pfam:PF01694 PIRSF:PIRSF037470 PROSITE:PS50222
Prosite:PS00018 ZFIN:ZDB-GENE-050417-2 GO:GO:0016021 GO:GO:0006508
GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247 GO:GO:0004252
PANTHER:PTHR22936 eggNOG:NOG300180 HOGENOM:HOG000231407
HOVERGEN:HBG059476 MEROPS:S54.006 EMBL:BX663498 EMBL:BX664602
IPI:IPI00836668 UniGene:Dr.115562 ProteinModelPortal:A2BHW3
STRING:A2BHW3 InParanoid:A2BHW3 ArrayExpress:A2BHW3 Bgee:A2BHW3
Uniprot:A2BHW3
Length = 409
Score = 118 (46.6 bits), Expect = 0.00021, P = 0.00021
Identities = 28/80 (35%), Positives = 42/80 (52%)
Query: 168 KGQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASS-AMSY 226
+ Q WR + F+HA I HL +N +G +E + G R VY A+A S A+S
Sbjct: 213 RAQAWRFLSYIFMHAGIEHLGLNMAMQLLVGVPLEMVHGALRIGLVYVCGALAGSLAVSV 272
Query: 227 RFCNSPAVGASGAIFGLVGS 246
+P VG+SG ++ LV +
Sbjct: 273 TDMTAPVVGSSGGVYALVSA 292
>WB|WBGene00004403 [details] [associations]
symbol:rom-4 species:6239 "Caenorhabditis elegans"
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR002610 InterPro:IPR022764
Pfam:PF01694 GO:GO:0016021 GO:GO:0006508 GO:GO:0004252
PANTHER:PTHR22936 GeneTree:ENSGT00390000012532 EMBL:AL117204
RefSeq:NP_001076719.2 UniGene:Cel.24649 ProteinModelPortal:H2KML1
EnsemblMetazoa:Y116A8C.16c GeneID:3565076 KEGG:cel:CELE_Y116A8C.16
CTD:3565076 WormBase:Y116A8C.16c OMA:AYHPDIA Uniprot:H2KML1
Length = 1205
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 35/111 (31%), Positives = 57/111 (51%)
Query: 170 QFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAMSYRFC 229
QF+RL TS F+HA + HL ++ + +E + +R +YF+S I + S F
Sbjct: 929 QFYRLFTSLFVHAGVIHLALSLLFQYYVMKDLENLIASKRMAILYFASGIGGNLASAIFV 988
Query: 230 N-SPAVGASGAIFGLVGSFAVFIMRHRNILGGGKEEL-QHLAKVIIFNMVC 278
+PAVG S A G++ + V +R I+ K L QHL ++ ++C
Sbjct: 989 PYNPAVGPSSAQCGILAAVIVECCDNRRIIKEFKWALVQHL--IVTLLVLC 1037
>UNIPROTKB|Q00M95 [details] [associations]
symbol:RHBDF2 "Inactive rhomboid protein 2" species:9615
"Canis lupus familiaris" [GO:0005789 "endoplasmic reticulum
membrane" evidence=ISS] [GO:0050709 "negative regulation of protein
secretion" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0019838 "growth factor binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694
GO:GO:0016021 GO:GO:0005886 GO:GO:0005789 GO:GO:0015031
GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 GO:GO:0050709
eggNOG:COG0705 GeneTree:ENSGT00390000012532 HOGENOM:HOG000154118
HOVERGEN:HBG059673 InterPro:IPR022241 Pfam:PF12595 EMBL:DQ336163
RefSeq:NP_001070906.1 UniGene:Cfa.26174 ProteinModelPortal:Q00M95
MEROPS:S54.953 Ensembl:ENSCAFT00000008200 GeneID:483332
KEGG:cfa:483332 CTD:79651 InParanoid:Q00M95 OMA:IRKGAAQ
OrthoDB:EOG4CVG67 NextBio:20857743 Uniprot:Q00M95
Length = 827
Score = 120 (47.3 bits), Expect = 0.00034, P = 0.00034
Identities = 32/110 (29%), Positives = 55/110 (50%)
Query: 170 QFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAMSYRFC 229
QF+RL S FLHA + H +V+ +I +EK+ G R ++ S I + S F
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 230 NSPA-VGASGAIFGLVGSFAVFIMRHRNILGGGKEELQHLAKVIIFNMVC 278
A VG +G+ FGL+ V + + +L + +L+ +++F +C
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFIC 733
>UNIPROTKB|F1RZ67 [details] [associations]
symbol:RHBDF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] InterPro:IPR002610
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 GeneTree:ENSGT00390000012532
InterPro:IPR022241 Pfam:PF12595 EMBL:FP009759 RefSeq:XP_003131221.2
Ensembl:ENSSSCT00000022857 GeneID:100517601 KEGG:ssc:100517601
Uniprot:F1RZ67
Length = 827
Score = 120 (47.3 bits), Expect = 0.00034, P = 0.00034
Identities = 34/110 (30%), Positives = 55/110 (50%)
Query: 170 QFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAMSYRFC 229
QF+RL S FLHA + H +V+ +I +EK+ G R ++ S I + S F
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRISIIFVLSGITGNLASAIFL 683
Query: 230 NSPA-VGASGAIFGLVGSFAVFIMRHRNILGGGKEELQHLAKVIIFNMVC 278
A VG +G+ FGL+ V + + +L + +L+ V++F VC
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAVVLFLFVC 733
>UNIPROTKB|G4N225 [details] [associations]
symbol:MGG_07535 "Rhomboid family membrane protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0030437 "ascospore formation" evidence=IMP]
[GO:0048315 "conidium formation" evidence=IMP] InterPro:IPR002610
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0009405
EMBL:CM001233 GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936
GO:GO:0048315 GO:GO:0030437 RefSeq:XP_003711448.1
ProteinModelPortal:G4N225 EnsemblFungi:MGG_07535T0 GeneID:2683455
KEGG:mgr:MGG_07535 Uniprot:G4N225
Length = 558
Score = 118 (46.6 bits), Expect = 0.00034, P = 0.00034
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 170 QFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAM--SYR 227
Q++R T F+HA + H+ N ++G ME+ G R+ VY S+ I + +Y
Sbjct: 297 QWFRFITPIFMHAGLIHIGFNMLLQLTLGREMEQAIGSIRFFLVYMSAGIFGFVLGGNYA 356
Query: 228 FCNSPAVGASGAIFGLV 244
+P+ GASG++FG++
Sbjct: 357 GAGTPSTGASGSLFGVI 373
>UNIPROTKB|F1RZ68 [details] [associations]
symbol:RHBDF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] InterPro:IPR002610 InterPro:IPR022764
Pfam:PF01694 GO:GO:0016021 GO:GO:0005886 GO:GO:0005789
GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 GO:GO:0050709
GeneTree:ENSGT00390000012532 InterPro:IPR022241 Pfam:PF12595
OMA:IRKGAAQ EMBL:FP009759 Ensembl:ENSSSCT00000018695 Uniprot:F1RZ68
Length = 855
Score = 120 (47.3 bits), Expect = 0.00035, P = 0.00035
Identities = 34/110 (30%), Positives = 55/110 (50%)
Query: 170 QFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAMSYRFC 229
QF+RL S FLHA + H +V+ +I +EK+ G R ++ S I + S F
Sbjct: 652 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRISIIFVLSGITGNLASAIFL 711
Query: 230 NSPA-VGASGAIFGLVGSFAVFIMRHRNILGGGKEELQHLAKVIIFNMVC 278
A VG +G+ FGL+ V + + +L + +L+ V++F VC
Sbjct: 712 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAVVLFLFVC 761
>UNIPROTKB|E1BLR4 [details] [associations]
symbol:RHBDF2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] InterPro:IPR002610 InterPro:IPR022764
Pfam:PF01694 GO:GO:0016021 GO:GO:0005886 GO:GO:0005789
GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 GO:GO:0050709
GeneTree:ENSGT00390000012532 InterPro:IPR022241 Pfam:PF12595
OMA:IRKGAAQ EMBL:DAAA02049502 IPI:IPI00699820
Ensembl:ENSBTAT00000004463 Uniprot:E1BLR4
Length = 830
Score = 119 (46.9 bits), Expect = 0.00044, P = 0.00044
Identities = 32/110 (29%), Positives = 55/110 (50%)
Query: 170 QFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAMSYRFC 229
QF+RL S FLHA + H +V+ +I +EK+ G R ++ S I + S F
Sbjct: 627 QFYRLWLSLFLHAGVIHCLVSVIFQMTILRDLEKLAGWHRISIIFILSGITGNLASALFL 686
Query: 230 NSPA-VGASGAIFGLVGSFAVFIMRHRNILGGGKEELQHLAKVIIFNMVC 278
A VG +G+ FGL+ V + + +L + +L+ +++F +C
Sbjct: 687 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFIC 736
>UNIPROTKB|Q6PJF5 [details] [associations]
symbol:RHBDF2 "Inactive rhomboid protein 2" species:9606
"Homo sapiens" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019838 "growth factor binding"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=ISS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=ISS] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
GO:GO:0005886 GO:GO:0005789 GO:GO:0015031 GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 GO:GO:0050709 eggNOG:COG0705
HOGENOM:HOG000154118 HOVERGEN:HBG059673 InterPro:IPR022241
Pfam:PF12595 MEROPS:S54.953 CTD:79651 OMA:IRKGAAQ OrthoDB:EOG4CVG67
EMBL:AY500247 EMBL:AK025994 EMBL:AK292135 EMBL:AK292166
EMBL:AC015802 EMBL:BC035829 EMBL:BC016034 IPI:IPI00433499
IPI:IPI00470604 RefSeq:NP_001005498.2 RefSeq:NP_078875.4
UniGene:Hs.464157 ProteinModelPortal:Q6PJF5 STRING:Q6PJF5
PhosphoSite:Q6PJF5 DMDM:193806488 PaxDb:Q6PJF5 PRIDE:Q6PJF5
Ensembl:ENST00000313080 Ensembl:ENST00000389760 GeneID:79651
KEGG:hsa:79651 UCSC:uc002jrq.2 UCSC:uc021udh.1
GeneCards:GC17M074466 HGNC:HGNC:20788 HPA:HPA018080 MIM:148500
MIM:614404 neXtProt:NX_Q6PJF5 Orphanet:2198 PharmGKB:PA134980674
InParanoid:Q6PJF5 GenomeRNAi:79651 NextBio:68812 Bgee:Q6PJF5
CleanEx:HS_RHBDF2 Genevestigator:Q6PJF5 Uniprot:Q6PJF5
Length = 856
Score = 118 (46.6 bits), Expect = 0.00059, P = 0.00059
Identities = 32/110 (29%), Positives = 55/110 (50%)
Query: 170 QFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAMSYRFC 229
QF+RL S FLHA + H +V+ +I +EK+ G R ++ S I + S F
Sbjct: 653 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 712
Query: 230 NSPA-VGASGAIFGLVGSFAVFIMRHRNILGGGKEELQHLAKVIIFNMVC 278
A VG +G+ FGL+ V + + +L + +L+ +++F +C
Sbjct: 713 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFIC 762
>WB|WBGene00004402 [details] [associations]
symbol:rom-3 species:6239 "Caenorhabditis elegans"
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR002610 InterPro:IPR022764
Pfam:PF01694 GO:GO:0016021 GO:GO:0006508 GO:GO:0004252
PANTHER:PTHR22936 eggNOG:COG0705 GeneTree:ENSGT00390000012532
EMBL:AL117204 PIR:T31520 RefSeq:NP_503013.2 UniGene:Cel.28541
ProteinModelPortal:Q9U2S3 MEROPS:S54.A11 EnsemblMetazoa:Y116A8C.14
GeneID:191000 KEGG:cel:CELE_Y116A8C.14 UCSC:Y116A8C.14 CTD:191000
WormBase:Y116A8C.14 HOGENOM:HOG000015987 InParanoid:Q9U2S3
OMA:FTSLFIH NextBio:947620 Uniprot:Q9U2S3
Length = 861
Score = 118 (46.6 bits), Expect = 0.00060, P = 0.00060
Identities = 33/109 (30%), Positives = 54/109 (49%)
Query: 170 QFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAMSYRFC 229
Q +RL TS F+HA + HL ++ E + G +R +YF+S I+ + S F
Sbjct: 584 QIYRLFTSLFIHAGVIHLALSMAFQMYFMAYQENLIGSKRMAILYFASGISGNLASAIFV 643
Query: 230 NS-PAVGASGAIFGLVGSFAVFIMRHRNILGGGKEELQHLAKVIIFNMV 277
P VG S A G+ S V + R++L + + Q +A +I+ +V
Sbjct: 644 PYYPTVGPSSAQCGVFSSVVVELWHFRHLLDPFELKFQSIAHLIVTLLV 692
>MGI|MGI:2442473 [details] [associations]
symbol:Rhbdf2 "rhomboid 5 homolog 2 (Drosophila)"
species:10090 "Mus musculus" [GO:0004252 "serine-type endopeptidase
activity" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IDA] InterPro:IPR002610 InterPro:IPR022764
Pfam:PF01694 MGI:MGI:2442473 GO:GO:0016021 GO:GO:0005886
GO:GO:0005789 GO:GO:0015031 GO:GO:0006508 PANTHER:PTHR22936
GO:GO:0050709 eggNOG:COG0705 GeneTree:ENSGT00390000012532
HOGENOM:HOG000154118 HOVERGEN:HBG059673 InterPro:IPR022241
Pfam:PF12595 MEROPS:S54.953 CTD:79651 OMA:IRKGAAQ OrthoDB:EOG4CVG67
EMBL:AY167043 EMBL:AK028872 EMBL:AK171085 EMBL:AL607039
EMBL:BC031398 EMBL:BC052182 IPI:IPI00222305 RefSeq:NP_001161152.1
RefSeq:NP_766160.2 UniGene:Mm.89695 ProteinModelPortal:Q80WQ6
IntAct:Q80WQ6 PhosphoSite:Q80WQ6 PaxDb:Q80WQ6 PRIDE:Q80WQ6
Ensembl:ENSMUST00000103028 Ensembl:ENSMUST00000103029 GeneID:217344
KEGG:mmu:217344 UCSC:uc007mls.2 InParanoid:Q80WQ6 NextBio:375793
Bgee:Q80WQ6 Genevestigator:Q80WQ6 Uniprot:Q80WQ6
Length = 827
Score = 117 (46.2 bits), Expect = 0.00073, P = 0.00073
Identities = 32/110 (29%), Positives = 55/110 (50%)
Query: 170 QFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASSAMSYRFC 229
QF+R+ S FLHA I H +V+ +I +EK+ G R ++ S I + S F
Sbjct: 624 QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 683
Query: 230 NSPA-VGASGAIFGLVGSFAVFIMRHRNILGGGKEELQHLAKVIIFNMVC 278
A VG +G+ FGL+ V + + +L + +L+ +++F +C
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFIC 733
>MGI|MGI:2179276 [details] [associations]
symbol:Rhbdl3 "rhomboid, veinlet-like 3 (Drosophila)"
species:10090 "Mus musculus" [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008236 "serine-type peptidase activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR002048 InterPro:IPR002610
InterPro:IPR011992 InterPro:IPR017213 InterPro:IPR022764
Pfam:PF01694 PIRSF:PIRSF037470 PROSITE:PS50222 MGI:MGI:2179276
GO:GO:0016021 GO:GO:0006508 GO:GO:0005509 Gene3D:1.10.238.10
GO:GO:0004252 PANTHER:PTHR22936 eggNOG:NOG300180
HOGENOM:HOG000231407 HOVERGEN:HBG059476 KO:K02857 MEROPS:S54.006
CTD:162494 EMBL:AJ313479 EMBL:BC054784 EMBL:BC056969
IPI:IPI00312148 RefSeq:NP_631974.1 UniGene:Mm.194148
ProteinModelPortal:P58873 SMR:P58873 PhosphoSite:P58873
PRIDE:P58873 Ensembl:ENSMUST00000017836 GeneID:246104
KEGG:mmu:246104 InParanoid:P58873 OMA:MVHGAAR OrthoDB:EOG4M398V
NextBio:387083 Bgee:P58873 CleanEx:MM_RHBDL3 Genevestigator:P58873
GermOnline:ENSMUSG00000017692 Uniprot:P58873
Length = 404
Score = 112 (44.5 bits), Expect = 0.00099, P = 0.00099
Identities = 26/80 (32%), Positives = 41/80 (51%)
Query: 168 KGQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASS-AMSY 226
+ Q WR T F+HA + L +N +G +E + G R VY + +A S A+S
Sbjct: 208 RAQAWRYVTYIFMHAGVEQLGLNVALQLLVGVPLEMVHGATRIGLVYVAGVVAGSLAVSV 267
Query: 227 RFCNSPAVGASGAIFGLVGS 246
+P VG+SG ++ LV +
Sbjct: 268 ADMTAPVVGSSGGVYALVSA 287
>RGD|1311901 [details] [associations]
symbol:Rhbdl3 "rhomboid, veinlet-like 3 (Drosophila)"
species:10116 "Rattus norvegicus" [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR002048
InterPro:IPR002610 InterPro:IPR011992 InterPro:IPR017213
InterPro:IPR022764 Pfam:PF01694 PIRSF:PIRSF037470 PROSITE:PS50222
RGD:1311901 GO:GO:0016021 GO:GO:0006508 GO:GO:0005509
Gene3D:1.10.238.10 GO:GO:0004252 PANTHER:PTHR22936 EMBL:CH473948
KO:K02857 GeneTree:ENSGT00390000005726 MEROPS:S54.006 CTD:162494
OrthoDB:EOG4M398V IPI:IPI00369920 RefSeq:NP_001099289.1
UniGene:Rn.20693 Ensembl:ENSRNOT00000007312 GeneID:287556
KEGG:rno:287556 NextBio:626499 Uniprot:D4AAW6
Length = 404
Score = 112 (44.5 bits), Expect = 0.00099, P = 0.00099
Identities = 26/80 (32%), Positives = 41/80 (51%)
Query: 168 KGQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASS-AMSY 226
+ Q WR T F+HA + L +N +G +E + G R VY + +A S A+S
Sbjct: 208 RAQAWRYVTYIFMHAGVEQLGLNVALQLLVGVPLEMVHGATRIGLVYVAGVVAGSLAVSV 267
Query: 227 RFCNSPAVGASGAIFGLVGS 246
+P VG+SG ++ LV +
Sbjct: 268 ADMTAPVVGSSGGVYALVSA 287
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.136 0.426 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 309 283 0.00084 115 3 11 22 0.43 33
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 56
No. of states in DFA: 617 (66 KB)
Total size of DFA: 217 KB (2120 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.81u 0.25s 21.06t Elapsed: 00:00:01
Total cpu time: 20.81u 0.25s 21.06t Elapsed: 00:00:01
Start: Fri May 10 07:46:13 2013 End: Fri May 10 07:46:14 2013