Query 021698
Match_columns 309
No_of_seqs 334 out of 2405
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 07:59:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021698.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021698hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3he8_A Ribose-5-phosphate isom 100.0 1E-57 3.6E-62 385.7 14.7 139 13-159 1-144 (149)
2 3ph3_A Ribose-5-phosphate isom 100.0 2E-57 6.8E-62 389.8 14.9 146 6-159 14-164 (169)
3 3s5p_A Ribose 5-phosphate isom 100.0 7.2E-58 2.5E-62 391.1 11.9 143 8-158 17-164 (166)
4 3sgw_A Ribose 5-phosphate isom 100.0 2.1E-57 7.2E-62 393.6 14.1 149 6-161 22-179 (184)
5 2vvr_A Ribose-5-phosphate isom 100.0 4.6E-57 1.6E-61 382.1 14.2 139 13-159 2-145 (149)
6 1o1x_A Ribose-5-phosphate isom 100.0 1.7E-56 5.6E-61 379.6 14.7 138 11-156 11-153 (155)
7 3k7p_A Ribose 5-phosphate isom 100.0 1.3E-56 4.5E-61 387.0 12.7 144 10-160 20-170 (179)
8 2vvp_A Ribose-5-phosphate isom 100.0 3.7E-56 1.3E-60 380.9 13.4 142 12-160 3-150 (162)
9 4em8_A Ribose 5-phosphate isom 100.0 5.8E-56 2E-60 373.9 12.8 135 12-156 7-147 (148)
10 2ppw_A Conserved domain protei 100.0 2.3E-52 8E-57 371.4 12.3 138 11-153 2-156 (216)
11 3ono_A Ribose/galactose isomer 100.0 3.6E-52 1.2E-56 369.7 12.3 138 11-153 2-155 (214)
12 3c5y_A Ribose/galactose isomer 100.0 9.3E-49 3.2E-53 349.8 11.7 139 11-153 20-172 (231)
13 2fqp_A Hypothetical protein BP 99.5 1.9E-13 6.4E-18 106.3 10.2 82 201-284 4-90 (97)
14 3fjs_A Uncharacterized protein 99.5 4.1E-13 1.4E-17 107.9 12.4 67 216-284 39-105 (114)
15 2pfw_A Cupin 2, conserved barr 99.5 1.2E-12 4E-17 104.0 13.7 95 189-285 8-104 (116)
16 2bnm_A Epoxidase; oxidoreducta 99.4 1.5E-12 5.3E-17 113.2 13.9 141 129-285 38-195 (198)
17 4e2g_A Cupin 2 conserved barre 99.4 1.3E-12 4.5E-17 105.3 12.0 90 193-284 20-111 (126)
18 1y9q_A Transcriptional regulat 99.4 1.3E-11 4.5E-16 107.0 15.5 129 129-285 39-175 (192)
19 1yhf_A Hypothetical protein SP 99.3 1.1E-11 3.6E-16 98.3 12.3 65 216-282 43-107 (115)
20 2b8m_A Hypothetical protein MJ 99.3 1.9E-11 6.4E-16 97.5 12.9 64 216-281 30-94 (117)
21 3ht1_A REMF protein; cupin fol 99.3 3.4E-12 1.2E-16 104.9 8.7 64 216-281 42-107 (145)
22 2o1q_A Putative acetyl/propion 99.3 3.5E-12 1.2E-16 107.1 8.5 102 192-296 14-127 (145)
23 3h8u_A Uncharacterized conserv 99.3 1.1E-11 3.9E-16 99.8 11.2 65 216-282 42-108 (125)
24 3ibm_A Cupin 2, conserved barr 99.3 2.1E-11 7.3E-16 104.5 13.5 65 216-282 59-124 (167)
25 1v70_A Probable antibiotics sy 99.3 2.2E-11 7.5E-16 93.6 11.4 67 216-284 31-98 (105)
26 4i4a_A Similar to unknown prot 99.3 4.8E-11 1.7E-15 96.3 13.5 75 216-297 37-111 (128)
27 2gu9_A Tetracenomycin polyketi 99.3 1.2E-11 4.1E-16 96.9 9.6 66 216-283 24-92 (113)
28 3kgz_A Cupin 2 conserved barre 99.3 1.1E-11 3.6E-16 105.5 9.8 65 216-282 47-111 (156)
29 3h7j_A Bacilysin biosynthesis 99.3 2E-11 7E-16 110.3 11.5 85 199-285 19-105 (243)
30 3jzv_A Uncharacterized protein 99.3 1.3E-11 4.5E-16 106.0 9.7 65 216-282 56-120 (166)
31 2ozj_A Cupin 2, conserved barr 99.3 2.4E-11 8.4E-16 96.4 10.3 65 216-282 41-105 (114)
32 1lr5_A Auxin binding protein 1 99.2 5.6E-11 1.9E-15 100.6 12.3 89 191-281 11-117 (163)
33 2q30_A Uncharacterized protein 99.2 8.7E-11 3E-15 91.8 12.5 68 216-285 36-106 (110)
34 3bal_A Acetylacetone-cleaving 99.2 3.2E-11 1.1E-15 102.4 9.6 106 188-296 12-129 (153)
35 3ebr_A Uncharacterized RMLC-li 99.2 3.5E-11 1.2E-15 102.8 9.6 103 189-296 11-124 (159)
36 3l2h_A Putative sugar phosphat 99.2 5.1E-11 1.7E-15 100.7 10.4 68 216-285 49-119 (162)
37 3es1_A Cupin 2, conserved barr 99.2 3.1E-11 1.1E-15 104.5 8.6 68 216-286 82-150 (172)
38 1o4t_A Putative oxalate decarb 99.2 4.8E-11 1.7E-15 98.0 9.2 68 216-285 60-128 (133)
39 3h7j_A Bacilysin biosynthesis 99.2 1.1E-10 3.7E-15 105.5 12.1 65 216-282 148-213 (243)
40 1vj2_A Novel manganese-contain 99.2 4.5E-11 1.5E-15 97.1 8.6 66 216-283 51-116 (126)
41 2vpv_A Protein MIF2, MIF2P; nu 99.2 6.5E-11 2.2E-15 101.8 9.7 69 216-286 91-161 (166)
42 2o8q_A Hypothetical protein; c 99.2 5.4E-11 1.9E-15 97.0 8.8 77 217-295 45-127 (134)
43 2oa2_A BH2720 protein; 1017534 99.2 9.5E-11 3.3E-15 97.8 9.8 64 216-281 46-116 (148)
44 3i7d_A Sugar phosphate isomera 99.2 1.1E-10 3.7E-15 99.6 10.0 66 216-283 46-115 (163)
45 4h7l_A Uncharacterized protein 99.2 2.6E-10 8.8E-15 97.1 11.8 97 188-288 18-119 (157)
46 3rns_A Cupin 2 conserved barre 99.2 2.8E-10 9.4E-15 101.9 12.4 71 216-288 40-110 (227)
47 3cew_A Uncharacterized cupin p 99.1 2.4E-10 8.2E-15 92.2 10.4 63 216-280 29-93 (125)
48 3cjx_A Protein of unknown func 99.1 1.6E-10 5.6E-15 99.3 9.8 103 190-296 13-126 (165)
49 2f4p_A Hypothetical protein TM 99.1 1.8E-10 6.1E-15 96.4 9.6 65 216-282 51-116 (147)
50 3rns_A Cupin 2 conserved barre 99.1 2.4E-10 8.3E-15 102.3 11.1 67 216-284 156-223 (227)
51 2i45_A Hypothetical protein; n 99.1 1.1E-10 3.9E-15 91.6 7.3 62 217-281 32-95 (107)
52 3lwc_A Uncharacterized protein 99.1 2.8E-10 9.7E-15 92.4 9.7 59 216-277 43-101 (119)
53 1sfn_A Conserved hypothetical 99.1 4E-10 1.4E-14 102.2 11.1 67 216-284 168-235 (246)
54 1sef_A Conserved hypothetical 99.1 1E-09 3.4E-14 101.0 13.3 64 216-281 185-250 (274)
55 3lag_A Uncharacterized protein 99.1 1.5E-10 5.3E-15 90.7 6.1 76 207-284 9-90 (98)
56 3d82_A Cupin 2, conserved barr 99.0 7.2E-10 2.5E-14 85.3 9.1 57 224-282 40-97 (102)
57 1fi2_A Oxalate oxidase, germin 99.0 7.5E-10 2.6E-14 97.4 9.6 67 216-282 75-148 (201)
58 2ozi_A Hypothetical protein RP 99.0 2.9E-10 9.9E-15 89.4 6.0 66 216-283 20-89 (98)
59 2xlg_A SLL1785 protein, CUCA; 99.0 2.9E-10 9.8E-15 103.2 6.8 63 216-280 46-129 (239)
60 1dgw_A Canavalin; duplicated s 99.0 6.9E-10 2.3E-14 96.0 8.8 70 216-285 44-116 (178)
61 4e2q_A Ureidoglycine aminohydr 99.0 1.4E-09 4.7E-14 100.2 11.0 65 216-282 189-254 (266)
62 4b29_A Dimethylsulfoniopropion 99.0 7E-10 2.4E-14 98.8 8.7 70 216-288 135-207 (217)
63 1sq4_A GLXB, glyoxylate-induce 99.0 6.4E-10 2.2E-14 102.8 8.2 68 216-285 71-140 (278)
64 4e2q_A Ureidoglycine aminohydr 99.0 8.3E-10 2.8E-14 101.6 8.5 65 216-282 73-138 (266)
65 1y3t_A Hypothetical protein YX 99.0 1.4E-09 4.8E-14 101.5 10.1 87 189-278 17-110 (337)
66 1x82_A Glucose-6-phosphate iso 99.0 1.2E-09 4.2E-14 95.3 9.1 65 216-282 70-148 (190)
67 2opk_A Hypothetical protein; p 99.0 3.7E-09 1.3E-13 84.4 10.9 57 221-279 38-99 (112)
68 1rc6_A Hypothetical protein YL 99.0 1.1E-09 3.7E-14 99.9 8.6 69 216-286 62-132 (261)
69 1rc6_A Hypothetical protein YL 99.0 1.5E-09 5.1E-14 99.0 9.0 65 216-282 182-248 (261)
70 1o5u_A Novel thermotoga mariti 99.0 1.9E-09 6.5E-14 85.1 8.4 62 217-282 35-97 (101)
71 1sq4_A GLXB, glyoxylate-induce 98.9 3.4E-09 1.2E-13 97.9 9.2 64 216-281 194-258 (278)
72 1sef_A Conserved hypothetical 98.9 2.4E-09 8.2E-14 98.4 8.1 69 216-286 65-135 (274)
73 1j58_A YVRK protein; cupin, de 98.9 4E-09 1.4E-13 101.0 9.8 65 216-282 260-330 (385)
74 2q1z_B Anti-sigma factor CHRR, 98.9 6.7E-09 2.3E-13 91.3 10.2 87 194-286 104-194 (195)
75 2pyt_A Ethanolamine utilizatio 98.9 4.2E-09 1.4E-13 87.1 8.3 63 215-281 59-121 (133)
76 1y3t_A Hypothetical protein YX 98.9 1.2E-08 4E-13 95.3 12.1 87 189-278 189-282 (337)
77 2vqa_A SLL1358 protein, MNCA; 98.9 5.7E-09 2E-13 98.8 9.9 82 201-282 33-125 (361)
78 2vqa_A SLL1358 protein, MNCA; 98.9 5.5E-09 1.9E-13 99.0 9.6 65 216-282 237-307 (361)
79 4axo_A EUTQ, ethanolamine util 98.9 6.2E-09 2.1E-13 88.2 8.6 62 216-281 69-130 (151)
80 2d40_A Z3393, putative gentisa 98.8 4.9E-09 1.7E-13 100.1 7.7 66 216-282 103-168 (354)
81 2cav_A Protein (canavalin); vi 98.8 1.3E-08 4.5E-13 100.0 10.0 69 216-284 89-160 (445)
82 1juh_A Quercetin 2,3-dioxygena 98.8 2.1E-08 7.2E-13 95.4 11.2 62 217-280 51-121 (350)
83 1sfn_A Conserved hypothetical 98.7 1.9E-08 6.6E-13 91.0 8.5 63 216-282 53-115 (246)
84 3bu7_A Gentisate 1,2-dioxygena 98.7 3.4E-08 1.2E-12 95.6 10.6 64 216-281 297-361 (394)
85 3bcw_A Uncharacterized protein 98.7 2.1E-08 7.1E-13 81.9 7.6 63 216-281 52-115 (123)
86 3o14_A Anti-ecfsigma factor, C 98.7 5.1E-08 1.8E-12 87.5 10.4 89 191-285 15-109 (223)
87 1j58_A YVRK protein; cupin, de 98.7 3.1E-08 1.1E-12 94.8 8.9 63 216-278 82-147 (385)
88 1uij_A Beta subunit of beta co 98.7 2.8E-08 9.4E-13 96.9 8.6 66 216-281 52-120 (416)
89 3nw4_A Gentisate 1,2-dioxygena 98.7 2.5E-08 8.4E-13 95.7 8.0 66 216-283 106-172 (368)
90 2d40_A Z3393, putative gentisa 98.7 5.9E-08 2E-12 92.6 10.5 65 216-282 271-335 (354)
91 2ea7_A 7S globulin-1; beta bar 98.7 5.1E-08 1.8E-12 95.5 9.2 67 216-282 64-133 (434)
92 1fxz_A Glycinin G1; proglycini 98.6 1.4E-07 4.8E-12 93.4 11.8 81 197-278 313-407 (476)
93 3bu7_A Gentisate 1,2-dioxygena 98.6 9E-08 3.1E-12 92.6 10.1 68 216-284 126-194 (394)
94 3c3v_A Arachin ARAH3 isoform; 98.6 2E-07 6.7E-12 92.9 12.8 82 197-279 347-442 (510)
95 1yfu_A 3-hydroxyanthranilate-3 98.6 1.9E-07 6.6E-12 80.2 10.1 64 221-284 43-109 (174)
96 2e9q_A 11S globulin subunit be 98.6 8.3E-08 2.8E-12 94.6 8.7 83 201-283 43-157 (459)
97 1fxz_A Glycinin G1; proglycini 98.6 1.2E-07 4.1E-12 93.9 9.4 83 201-283 28-143 (476)
98 3qac_A 11S globulin SEED stora 98.5 1.6E-07 5.6E-12 92.5 8.8 84 201-284 30-161 (465)
99 2d5f_A Glycinin A3B4 subunit; 98.5 2E-07 6.8E-12 92.7 9.4 82 202-283 26-143 (493)
100 1juh_A Quercetin 2,3-dioxygena 98.5 3.3E-07 1.1E-11 87.2 10.6 68 217-286 253-325 (350)
101 1vr3_A Acireductone dioxygenas 98.5 3.6E-07 1.2E-11 80.1 9.5 62 217-280 78-154 (191)
102 2d5f_A Glycinin A3B4 subunit; 98.5 2.5E-07 8.6E-12 91.9 9.5 80 198-277 343-436 (493)
103 2phl_A Phaseolin; plant SEED s 98.5 2.5E-07 8.4E-12 89.7 7.7 89 195-283 22-131 (397)
104 3c3v_A Arachin ARAH3 isoform; 98.4 3.9E-07 1.3E-11 90.8 9.0 83 201-283 28-156 (510)
105 1zvf_A 3-hydroxyanthranilate 3 98.4 1.9E-06 6.4E-11 74.0 11.9 63 222-284 43-111 (176)
106 3fz3_A Prunin; TREE NUT allerg 98.4 8.4E-07 2.9E-11 88.4 10.9 81 196-276 368-462 (531)
107 2e9q_A 11S globulin subunit be 98.4 1.4E-06 4.7E-11 85.9 11.8 82 197-279 297-392 (459)
108 3nw4_A Gentisate 1,2-dioxygena 98.4 1.5E-06 5E-11 83.4 11.3 69 216-286 282-350 (368)
109 2arc_A ARAC, arabinose operon 98.4 1.1E-06 3.7E-11 72.6 9.0 48 228-277 33-80 (164)
110 2y0o_A Probable D-lyxose ketol 98.4 8.2E-07 2.8E-11 76.7 8.2 61 216-278 56-144 (175)
111 2phl_A Phaseolin; plant SEED s 98.4 2.6E-06 9E-11 82.5 12.3 88 197-284 220-321 (397)
112 1zrr_A E-2/E-2' protein; nicke 98.3 1.9E-07 6.4E-12 81.1 3.2 53 226-278 93-147 (179)
113 1uij_A Beta subunit of beta co 98.3 3.3E-06 1.1E-10 82.2 12.3 90 196-285 223-339 (416)
114 2ea7_A 7S globulin-1; beta bar 98.3 3.4E-06 1.2E-10 82.6 11.6 89 195-283 239-353 (434)
115 3ksc_A LEGA class, prolegumin; 98.3 5.6E-06 1.9E-10 82.2 13.1 82 196-277 332-427 (496)
116 3ksc_A LEGA class, prolegumin; 98.3 1.5E-06 5.1E-11 86.3 8.6 70 216-285 49-142 (496)
117 3kgl_A Cruciferin; 11S SEED gl 98.3 4.1E-06 1.4E-10 82.6 11.5 81 198-279 299-393 (466)
118 3kgl_A Cruciferin; 11S SEED gl 98.1 5.6E-06 1.9E-10 81.6 8.5 83 201-283 23-175 (466)
119 3qac_A 11S globulin SEED stora 98.1 1.8E-05 6E-10 78.0 11.8 81 195-275 296-390 (465)
120 2cav_A Protein (canavalin); vi 98.1 2.1E-05 7.3E-10 77.2 12.2 87 196-282 255-365 (445)
121 3s7i_A Allergen ARA H 1, clone 98.1 8.2E-06 2.8E-10 79.5 8.7 64 216-279 47-112 (418)
122 3d0j_A Uncharacterized protein 98.0 1.2E-05 4E-10 66.8 7.5 62 225-286 41-109 (140)
123 3fz3_A Prunin; TREE NUT allerg 98.0 1.4E-05 4.8E-10 79.6 8.3 85 201-285 28-204 (531)
124 3eqe_A Putative cystein deoxyg 98.0 9.6E-05 3.3E-09 63.5 12.5 67 216-282 72-146 (171)
125 3s7i_A Allergen ARA H 1, clone 97.9 4.2E-05 1.4E-09 74.5 9.8 84 196-279 236-358 (418)
126 2qnk_A 3-hydroxyanthranilate 3 97.9 0.0001 3.5E-09 67.7 11.3 62 222-284 40-104 (286)
127 2gm6_A Cysteine dioxygenase ty 97.9 0.00016 5.4E-09 64.0 12.2 64 216-279 82-157 (208)
128 3st7_A Capsular polysaccharide 97.7 0.00013 4.5E-09 68.2 9.5 72 216-287 275-354 (369)
129 3myx_A Uncharacterized protein 97.6 0.0002 7E-09 64.6 9.3 67 216-286 50-117 (238)
130 3o14_A Anti-ecfsigma factor, C 97.6 0.00032 1.1E-08 62.7 9.6 81 202-290 133-216 (223)
131 2pa7_A DTDP-6-deoxy-3,4-keto-h 97.5 0.00029 1E-08 58.6 8.5 70 220-290 42-117 (141)
132 3es4_A Uncharacterized protein 97.4 0.00034 1.2E-08 56.4 7.3 63 216-280 45-107 (116)
133 3gbg_A TCP pilus virulence reg 97.4 0.00025 8.5E-09 63.8 6.6 56 218-276 12-72 (276)
134 3eln_A Cysteine dioxygenase ty 97.2 0.0013 4.3E-08 57.8 9.1 62 216-277 73-146 (200)
135 2vec_A YHAK, pirin-like protei 97.2 0.0023 7.7E-08 58.3 11.0 69 218-287 69-143 (256)
136 3uss_A Putative uncharacterize 97.1 0.0037 1.3E-07 55.3 10.6 64 216-279 76-151 (211)
137 3ejk_A DTDP sugar isomerase; Y 97.0 0.0044 1.5E-07 53.2 10.2 68 218-286 58-141 (174)
138 3myx_A Uncharacterized protein 97.0 0.007 2.4E-07 54.5 11.9 63 216-280 170-232 (238)
139 3kmh_A D-lyxose isomerase; cup 96.9 0.0033 1.1E-07 56.3 9.0 80 216-295 109-221 (246)
140 2qnk_A 3-hydroxyanthranilate 3 96.9 0.0038 1.3E-07 57.3 9.6 47 234-282 227-273 (286)
141 1tq5_A Protein YHHW; bicupin, 96.8 0.0042 1.4E-07 56.0 8.9 68 218-286 46-119 (242)
142 4gjz_A Lysine-specific demethy 96.7 0.0052 1.8E-07 53.4 8.8 62 221-282 132-230 (235)
143 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 96.4 0.014 4.6E-07 51.2 9.1 65 221-287 68-144 (197)
144 1vrb_A Putative asparaginyl hy 96.4 0.023 7.9E-07 53.5 11.1 57 222-278 150-243 (342)
145 2qdr_A Uncharacterized protein 96.0 0.034 1.1E-06 50.5 9.8 80 204-289 79-164 (303)
146 3bb6_A Uncharacterized protein 95.9 0.016 5.5E-07 47.2 6.6 62 222-283 23-96 (127)
147 3al5_A HTYW5, JMJC domain-cont 95.9 0.04 1.4E-06 51.7 10.4 83 221-303 175-298 (338)
148 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 95.9 0.03 1E-06 48.4 8.6 65 221-285 56-134 (185)
149 3ryk_A DTDP-4-dehydrorhamnose 95.8 0.035 1.2E-06 48.8 8.9 62 221-283 78-155 (205)
150 2ixk_A DTDP-4-dehydrorhamnose 95.8 0.033 1.1E-06 48.2 8.5 63 221-285 57-135 (184)
151 1wlt_A 176AA long hypothetical 95.5 0.036 1.2E-06 48.4 7.6 64 221-285 73-152 (196)
152 2p17_A Pirin-like protein; GK1 95.5 0.062 2.1E-06 49.2 9.5 68 219-287 45-117 (277)
153 1yud_A Hypothetical protein SO 95.4 0.2 6.8E-06 42.7 11.8 62 215-276 51-122 (170)
154 1dgw_X Canavalin; duplicated s 95.4 0.017 5.9E-07 43.1 4.5 33 216-248 39-72 (79)
155 1dzr_A DTDP-4-dehydrorhamnose 95.2 0.14 4.7E-06 44.1 10.3 64 221-284 55-133 (183)
156 1oi6_A PCZA361.16; epimerase, 95.1 0.18 6.2E-06 44.2 11.0 62 221-283 55-132 (205)
157 1upi_A DTDP-4-dehydrorhamnose 95.0 0.22 7.4E-06 44.3 11.2 62 221-284 74-152 (225)
158 2xdv_A MYC-induced nuclear ant 95.0 0.14 4.7E-06 50.0 10.8 57 221-277 147-223 (442)
159 2c0z_A NOVW; isomerase, epimer 94.9 0.13 4.5E-06 45.4 9.5 63 221-284 63-141 (216)
160 3dl3_A Tellurite resistance pr 94.9 0.087 3E-06 42.4 7.4 52 232-283 35-94 (119)
161 1j1l_A Pirin; beta sandwich, c 94.4 0.1 3.5E-06 48.1 7.9 68 218-286 45-118 (290)
162 2qdr_A Uncharacterized protein 94.3 0.17 5.8E-06 46.0 8.8 72 205-289 206-289 (303)
163 4hn1_A Putative 3-epimerase in 94.0 0.53 1.8E-05 41.1 11.1 65 221-286 52-133 (201)
164 3d8c_A Hypoxia-inducible facto 93.7 0.28 9.5E-06 46.1 9.6 57 221-277 191-285 (349)
165 2qjv_A Uncharacterized IOLB-li 93.7 0.39 1.3E-05 43.8 10.1 70 216-287 32-111 (270)
166 3rcq_A Aspartyl/asparaginyl be 93.7 0.16 5.4E-06 44.3 7.2 82 216-303 105-192 (197)
167 4diq_A Lysine-specific demethy 93.3 0.29 9.9E-06 48.3 9.2 58 221-278 172-253 (489)
168 3iwt_A 178AA long hypothetical 92.7 0.21 7.1E-06 42.2 6.3 50 28-81 43-94 (178)
169 3k2o_A Bifunctional arginine d 91.3 1.1 3.9E-05 41.9 10.2 29 254-282 257-285 (336)
170 2yu1_A JMJC domain-containing 90.8 0.85 2.9E-05 44.5 9.1 65 218-282 201-295 (451)
171 3kv4_A PHD finger protein 8; e 90.7 0.81 2.8E-05 44.7 8.8 65 218-282 236-330 (447)
172 3kv5_D JMJC domain-containing 90.7 0.67 2.3E-05 45.7 8.3 65 218-282 271-365 (488)
173 3k3o_A PHF8, PHD finger protei 90.6 0.67 2.3E-05 44.2 7.9 63 220-282 154-246 (371)
174 2p17_A Pirin-like protein; GK1 90.4 0.71 2.4E-05 42.1 7.7 85 216-304 170-270 (277)
175 3pua_A GRC5, PHD finger protei 90.0 0.8 2.7E-05 43.9 8.0 63 220-282 181-273 (392)
176 1eyb_A Homogentisate 1,2-dioxy 90.0 0.86 2.9E-05 44.5 8.2 51 232-284 177-227 (471)
177 1e5r_A Proline oxidase; oxidor 89.0 0.33 1.1E-05 44.8 4.2 68 218-287 96-175 (290)
178 3kv9_A JMJC domain-containing 88.7 1.2 4.2E-05 42.7 8.2 63 220-282 182-274 (397)
179 1uuy_A CNX1, molybdopterin bio 88.1 0.65 2.2E-05 38.8 5.2 66 10-81 3-84 (167)
180 1ywk_A 4-deoxy-L-threo-5-hexos 88.0 1.3 4.4E-05 40.7 7.5 69 216-286 60-134 (289)
181 2vec_A YHAK, pirin-like protei 86.8 3.1 0.0001 37.5 9.2 66 216-283 185-251 (256)
182 2ypd_A Probable JMJC domain-co 86.7 1 3.6E-05 43.0 6.2 29 252-280 292-320 (392)
183 1qwr_A Mannose-6-phosphate iso 86.3 3 0.0001 38.6 9.2 36 232-269 268-303 (319)
184 2oyz_A UPF0345 protein VPA0057 85.8 2.1 7.3E-05 32.8 6.4 48 233-282 41-90 (94)
185 1mkz_A Molybdenum cofactor bio 84.6 3.2 0.00011 34.7 7.9 127 8-138 6-158 (172)
186 1tq5_A Protein YHHW; bicupin, 84.1 4.9 0.00017 35.7 9.2 63 216-284 163-226 (242)
187 2l2q_A PTS system, cellobiose- 83.8 0.24 8.1E-06 38.7 0.3 48 71-123 6-63 (109)
188 3g7d_A PHPD; non heme Fe(II) d 83.8 4.6 0.00016 37.9 8.9 72 216-290 337-412 (443)
189 1zx5_A Mannosephosphate isomer 83.4 0.72 2.5E-05 42.5 3.4 21 253-273 158-178 (300)
190 3hqx_A UPF0345 protein aciad03 83.2 4.4 0.00015 31.9 7.4 65 217-282 41-106 (111)
191 2qjv_A Uncharacterized IOLB-li 83.2 4.3 0.00015 36.9 8.5 76 219-297 158-260 (270)
192 3pur_A Lysine-specific demethy 82.3 3.5 0.00012 41.0 8.0 28 254-281 367-394 (528)
193 1qwr_A Mannose-6-phosphate iso 82.1 0.86 2.9E-05 42.3 3.4 21 253-273 158-178 (319)
194 2pbq_A Molybdenum cofactor bio 81.9 2 7E-05 36.2 5.5 48 29-81 29-81 (178)
195 2wfp_A Mannose-6-phosphate iso 81.8 2.7 9.3E-05 40.1 6.9 38 230-269 339-376 (394)
196 1j1l_A Pirin; beta sandwich, c 81.6 6.9 0.00023 35.8 9.3 88 217-306 173-273 (290)
197 1y5e_A Molybdenum cofactor bio 80.6 3.3 0.00011 34.5 6.3 69 9-81 10-85 (169)
198 1e2b_A Enzyme IIB-cellobiose; 80.6 0.48 1.6E-05 36.9 1.0 20 71-90 5-24 (106)
199 1pmi_A PMI, phosphomannose iso 79.1 7.1 0.00024 37.8 8.9 45 230-276 376-423 (440)
200 1zx5_A Mannosephosphate isomer 78.9 2.4 8.2E-05 39.0 5.3 36 232-270 246-282 (300)
201 3eo6_A Protein of unknown func 78.9 4.7 0.00016 31.5 6.1 46 233-280 54-101 (106)
202 1tvm_A PTS system, galactitol- 78.4 0.58 2E-05 36.7 0.8 23 68-90 20-43 (113)
203 1xru_A 4-deoxy-L-threo-5-hexos 78.2 5 0.00017 36.7 7.1 54 232-287 77-135 (282)
204 2wfp_A Mannose-6-phosphate iso 78.0 1.5 5.1E-05 42.0 3.7 22 253-274 240-261 (394)
205 1ccw_A Protein (glutamate muta 77.4 11 0.00037 30.1 8.3 34 14-48 5-41 (137)
206 3ezx_A MMCP 1, monomethylamine 77.1 22 0.00076 30.6 10.8 40 10-50 90-132 (215)
207 3rfq_A Pterin-4-alpha-carbinol 76.8 5.3 0.00018 34.1 6.5 118 8-132 26-171 (185)
208 4fyk_A Deoxyribonucleoside 5'- 76.3 9.1 0.00031 31.7 7.6 118 12-139 2-144 (152)
209 3pdk_A Phosphoglucosamine muta 76.2 4.5 0.00015 39.4 6.6 47 12-58 61-109 (469)
210 3i3w_A Phosphoglucosamine muta 76.0 3.3 0.00011 40.0 5.6 44 14-57 43-88 (443)
211 2rg4_A Uncharacterized protein 75.4 4.8 0.00016 35.0 6.0 58 217-276 107-192 (216)
212 3mdp_A Cyclic nucleotide-bindi 74.3 11 0.00037 28.6 7.3 74 217-290 31-116 (142)
213 1ft9_A Carbon monoxide oxidati 73.6 22 0.00074 29.6 9.7 69 217-287 25-96 (222)
214 2pjk_A 178AA long hypothetical 73.4 3.8 0.00013 34.6 4.7 51 28-82 43-95 (178)
215 2g2c_A Putative molybdenum cof 73.2 1.7 5.6E-05 36.3 2.3 57 20-81 24-82 (167)
216 2yxb_A Coenzyme B12-dependent 72.7 11 0.00039 31.0 7.4 60 10-78 16-78 (161)
217 1pmi_A PMI, phosphomannose iso 72.6 3 0.0001 40.5 4.3 23 253-275 266-288 (440)
218 1vkr_A Mannitol-specific PTS s 72.5 0.71 2.4E-05 37.1 -0.1 20 70-89 14-34 (125)
219 2fmy_A COOA, carbon monoxide o 71.2 24 0.00082 29.2 9.3 71 217-289 29-102 (220)
220 4f8a_A Potassium voltage-gated 69.1 20 0.00069 27.7 8.0 71 218-290 53-131 (160)
221 3bpz_A Potassium/sodium hyperp 67.8 7.2 0.00025 32.3 5.2 71 217-288 97-172 (202)
222 2is8_A Molybdopterin biosynthe 67.6 4.3 0.00015 33.6 3.7 49 29-81 25-75 (164)
223 3dv8_A Transcriptional regulat 67.6 20 0.0007 29.4 8.1 73 217-289 28-111 (220)
224 3pna_A CAMP-dependent protein 66.7 17 0.00057 28.4 7.0 68 218-287 64-137 (154)
225 1vp6_A CNBD, cyclic-nucleotide 66.6 9.3 0.00032 29.0 5.3 71 217-290 36-111 (138)
226 3czc_A RMPB; alpha/beta sandwi 65.7 1.6 5.3E-05 33.9 0.5 19 69-87 18-36 (110)
227 1p5d_X PMM, phosphomannomutase 65.5 8 0.00027 37.3 5.7 45 13-57 49-95 (463)
228 2z69_A DNR protein; beta barre 64.9 20 0.0007 27.4 7.1 74 217-290 37-120 (154)
229 2f7l_A 455AA long hypothetical 64.3 12 0.00042 35.9 6.7 46 13-58 38-85 (455)
230 3ocp_A PRKG1 protein; serine/t 64.0 26 0.0009 26.6 7.6 67 218-286 49-121 (139)
231 2khz_A C-MYC-responsive protei 63.3 8.8 0.0003 31.8 4.8 33 9-42 8-44 (165)
232 2qcs_B CAMP-dependent protein 63.3 20 0.00069 31.0 7.5 71 218-290 65-141 (291)
233 3uw2_A Phosphoglucomutase/phos 63.0 13 0.00046 36.2 6.8 44 13-56 63-108 (485)
234 2d93_A RAP guanine nucleotide 62.9 7.6 0.00026 29.6 4.1 66 218-284 42-114 (134)
235 1yll_A PA5104, conserved hypot 62.7 13 0.00045 32.1 5.9 38 231-270 138-176 (200)
236 1wqa_A Phospho-sugar mutase; a 61.9 14 0.00047 35.6 6.6 45 13-57 42-88 (455)
237 3ukn_A Novel protein similar t 61.0 33 0.0011 28.3 8.2 71 217-289 100-178 (212)
238 3b02_A Transcriptional regulat 60.1 26 0.00089 28.5 7.3 71 219-289 3-81 (195)
239 2oz6_A Virulence factor regula 59.3 35 0.0012 27.6 8.0 74 217-290 15-101 (207)
240 3pzy_A MOG; ssgcid, seattle st 58.7 8.8 0.0003 31.8 4.0 49 28-82 30-80 (164)
241 4ev0_A Transcription regulator 58.4 21 0.00073 29.2 6.5 73 217-289 24-105 (216)
242 3ryp_A Catabolite gene activat 58.3 22 0.00075 29.0 6.5 74 217-290 21-104 (210)
243 3d0s_A Transcriptional regulat 58.1 35 0.0012 28.2 7.9 74 217-290 31-113 (227)
244 2lci_A Protein OR36; structura 57.5 6.6 0.00023 30.2 2.7 114 13-136 1-122 (134)
245 1jlj_A Gephyrin; globular alph 57.5 11 0.00037 32.1 4.5 73 1-81 1-91 (189)
246 2pqq_A Putative transcriptiona 57.1 39 0.0013 25.5 7.5 74 217-290 30-112 (149)
247 3hdv_A Response regulator; PSI 56.9 57 0.0019 24.1 11.7 36 7-44 2-37 (136)
248 3e6c_C CPRK, cyclic nucleotide 56.6 46 0.0016 28.1 8.5 72 217-288 34-111 (250)
249 3czc_A RMPB; alpha/beta sandwi 56.5 14 0.00048 28.4 4.6 31 10-40 16-49 (110)
250 1v7r_A Hypothetical protein PH 56.3 14 0.00047 31.6 4.9 78 13-106 1-85 (186)
251 3kcc_A Catabolite gene activat 56.1 45 0.0015 28.6 8.4 74 217-290 71-154 (260)
252 4hjh_A Phosphomannomutase; str 55.8 21 0.00073 34.5 6.8 46 12-57 49-96 (481)
253 3lkv_A Uncharacterized conserv 55.1 84 0.0029 27.7 10.3 118 11-135 7-137 (302)
254 3cg4_A Response regulator rece 54.9 63 0.0021 24.0 10.4 36 7-44 2-37 (142)
255 3eod_A Protein HNR; response r 54.9 40 0.0014 24.8 7.0 35 7-43 2-36 (130)
256 2xxz_A Lysine-specific demethy 54.8 19 0.00064 33.6 5.9 26 254-279 280-305 (332)
257 3of1_A CAMP-dependent protein 54.2 26 0.00088 29.2 6.4 77 218-295 151-233 (246)
258 1wv2_A Thiazole moeity, thiazo 53.6 22 0.00074 32.1 5.9 101 11-123 104-221 (265)
259 3tqu_A Non-canonical purine NT 53.4 2.4 8.2E-05 36.9 -0.4 74 13-94 5-88 (203)
260 3e97_A Transcriptional regulat 53.2 56 0.0019 27.0 8.4 71 217-287 31-110 (231)
261 1zyb_A Transcription regulator 52.6 59 0.002 27.1 8.4 77 217-293 45-131 (232)
262 3idb_B CAMP-dependent protein 52.4 79 0.0027 24.4 9.3 69 217-285 63-139 (161)
263 3of1_A CAMP-dependent protein 51.7 18 0.00062 30.2 5.0 73 217-290 32-109 (246)
264 1b78_A Pyrophosphatase; struct 50.8 6.7 0.00023 33.8 2.0 80 11-106 7-93 (193)
265 2zcw_A TTHA1359, transcription 50.6 42 0.0014 27.3 7.0 71 218-289 8-88 (202)
266 2ptm_A Hyperpolarization-activ 50.3 25 0.00087 28.7 5.6 71 217-288 96-172 (198)
267 1o5l_A Transcriptional regulat 50.2 32 0.0011 28.4 6.3 74 216-289 23-106 (213)
268 3fx3_A Cyclic nucleotide-bindi 50.2 53 0.0018 27.3 7.7 73 217-289 36-117 (237)
269 1di6_A MOGA, molybdenum cofact 49.9 14 0.00048 31.6 3.9 49 29-81 27-79 (195)
270 3kbq_A Protein TA0487; structu 49.7 16 0.00054 30.8 4.1 80 28-136 26-107 (172)
271 3shr_A CGMP-dependent protein 48.8 34 0.0011 29.8 6.5 70 218-289 65-140 (299)
272 1y80_A Predicted cobalamin bin 48.3 1.2E+02 0.0041 25.3 10.1 36 12-48 88-126 (210)
273 3dn7_A Cyclic nucleotide bindi 47.7 67 0.0023 25.7 7.8 74 217-290 32-115 (194)
274 3klj_A NAD(FAD)-dependent dehy 47.5 46 0.0016 30.8 7.5 125 1-133 1-168 (385)
275 3hzh_A Chemotaxis response reg 45.5 69 0.0024 24.6 7.3 31 10-42 34-64 (157)
276 3hv2_A Response regulator/HD d 45.5 84 0.0029 23.9 7.8 37 6-44 8-44 (153)
277 2l2q_A PTS system, cellobiose- 45.4 19 0.00066 27.4 3.7 41 11-52 3-45 (109)
278 1tuo_A Putative phosphomannomu 45.3 31 0.0011 33.2 6.0 45 13-57 49-96 (464)
279 3nbm_A PTS system, lactose-spe 45.0 8.1 0.00028 30.0 1.5 22 69-90 6-27 (108)
280 1kfi_A Phosphoglucomutase 1; p 44.4 50 0.0017 32.7 7.5 46 14-59 60-110 (572)
281 3iwz_A CAP-like, catabolite ac 44.3 79 0.0027 25.9 7.9 75 216-290 35-119 (230)
282 4ava_A Lysine acetyltransferas 43.0 62 0.0021 28.6 7.4 71 217-287 38-116 (333)
283 4din_B CAMP-dependent protein 42.9 43 0.0015 30.9 6.4 84 220-303 276-369 (381)
284 3nbm_A PTS system, lactose-spe 42.9 27 0.00092 26.9 4.2 36 8-43 2-39 (108)
285 3hdg_A Uncharacterized protein 42.9 98 0.0033 22.8 9.3 37 7-45 2-38 (137)
286 3avr_A Lysine-specific demethy 42.3 38 0.0013 33.6 6.1 26 254-279 339-364 (531)
287 4ask_A Lysine-specific demethy 41.7 60 0.0021 31.9 7.4 26 254-279 314-339 (510)
288 3cg0_A Response regulator rece 41.6 1E+02 0.0035 22.6 8.9 35 7-43 4-38 (140)
289 1dgw_Y Canavalin; duplicated s 41.3 37 0.0013 25.6 4.7 27 254-280 7-33 (93)
290 3gt7_A Sensor protein; structu 40.9 1.2E+02 0.004 23.1 10.1 34 9-44 4-37 (154)
291 3s99_A Basic membrane lipoprot 40.8 1.4E+02 0.0048 27.5 9.6 100 7-120 21-131 (356)
292 3fro_A GLGA glycogen synthase; 40.5 29 0.001 31.4 4.8 35 11-45 1-42 (439)
293 3la7_A Global nitrogen regulat 40.5 1.2E+02 0.0042 25.3 8.7 74 217-290 45-129 (243)
294 3mtq_A Putative phosphoenolpyr 39.8 83 0.0028 25.8 7.0 63 12-78 21-86 (159)
295 3gyd_A CNMP-BD protein, cyclic 39.5 68 0.0023 25.9 6.6 74 217-290 64-146 (187)
296 1tvm_A PTS system, galactitol- 39.5 52 0.0018 25.2 5.4 35 7-41 16-53 (113)
297 3ihk_A Thiamin pyrophosphokina 39.0 67 0.0023 27.7 6.6 62 14-79 20-99 (218)
298 2z0f_A Putative phosphoglucomu 38.8 49 0.0017 32.2 6.4 45 14-58 64-113 (524)
299 3ixl_A Amdase, arylmalonate de 38.7 92 0.0032 27.0 7.6 66 13-84 118-195 (240)
300 2fts_A Gephyrin; gephyrin, neu 38.2 26 0.00089 33.5 4.2 47 29-81 212-260 (419)
301 3o8m_A Hexokinase; rnaseh-like 36.3 20 0.00069 35.1 3.1 110 19-134 180-321 (485)
302 2lpm_A Two-component response 36.3 34 0.0012 26.7 3.9 33 9-43 5-37 (123)
303 2qcs_B CAMP-dependent protein 35.9 72 0.0025 27.4 6.5 76 218-293 183-268 (291)
304 1g8l_A Molybdopterin biosynthe 35.6 25 0.00086 33.5 3.6 47 29-81 208-256 (411)
305 3tnp_B CAMP-dependent protein 35.2 1.5E+02 0.0051 27.6 9.0 71 217-287 170-248 (416)
306 3pmg_A Alpha-D-glucose-1,6-bis 34.4 71 0.0024 31.6 6.8 46 13-58 54-104 (561)
307 2car_A Inosine triphosphate py 34.3 24 0.00083 30.3 3.0 78 13-106 10-94 (196)
308 4din_B CAMP-dependent protein 33.9 51 0.0017 30.4 5.4 72 217-290 155-232 (381)
309 3f4w_A Putative hexulose 6 pho 33.8 23 0.00079 29.7 2.7 49 13-62 1-49 (211)
310 3dkw_A DNR protein; CRP-FNR, H 33.7 32 0.0011 28.4 3.6 74 217-290 34-117 (227)
311 4b4k_A N5-carboxyaminoimidazol 33.4 55 0.0019 27.8 4.9 121 10-137 18-154 (181)
312 1uz5_A MOEA protein, 402AA lon 32.8 29 0.001 33.0 3.5 92 29-136 211-320 (402)
313 3gx1_A LIN1832 protein; APC633 32.8 1.1E+02 0.0037 24.1 6.4 66 11-80 3-72 (130)
314 3shr_A CGMP-dependent protein 32.5 81 0.0028 27.3 6.3 55 233-287 198-262 (299)
315 3p9z_A Uroporphyrinogen III co 32.4 1.4E+02 0.0049 25.2 7.7 104 15-129 114-220 (229)
316 3otg_A CALG1; calicheamicin, T 32.2 47 0.0016 30.0 4.8 41 7-47 15-57 (412)
317 3c48_A Predicted glycosyltrans 31.7 45 0.0015 30.4 4.5 40 6-45 14-66 (438)
318 3kp1_A D-ornithine aminomutase 31.2 21 0.00071 36.5 2.2 40 11-50 601-646 (763)
319 2rjn_A Response regulator rece 31.1 1.7E+02 0.0057 22.0 11.0 36 6-43 1-36 (154)
320 2gau_A Transcriptional regulat 31.0 89 0.0031 25.7 6.1 74 216-289 34-116 (232)
321 3h5i_A Response regulator/sens 30.4 1.7E+02 0.0056 21.7 8.7 31 11-43 4-34 (140)
322 2qr3_A Two-component system re 30.2 1.6E+02 0.0055 21.5 10.7 31 12-44 3-33 (140)
323 2lk2_A Homeobox protein TGIF1; 30.0 6.8 0.00023 29.6 -1.2 40 124-166 13-52 (89)
324 2htm_A Thiazole biosynthesis p 29.9 32 0.0011 31.1 3.0 80 33-123 119-212 (268)
325 3to5_A CHEY homolog; alpha(5)b 29.4 89 0.003 24.4 5.4 32 10-43 10-41 (134)
326 4grd_A N5-CAIR mutase, phospho 29.4 1.5E+02 0.005 25.0 6.9 80 13-99 15-100 (173)
327 1o7f_A CAMP-dependent RAP1 gua 29.2 1.5E+02 0.0051 27.5 7.9 70 218-287 68-147 (469)
328 1ys7_A Transcriptional regulat 29.0 69 0.0024 26.3 5.0 33 9-43 4-36 (233)
329 1wgp_A Probable cyclic nucleot 28.8 23 0.00077 26.8 1.7 52 233-284 47-117 (137)
330 1wu2_A MOEA protein, molybdopt 28.8 28 0.00095 33.1 2.6 34 28-61 214-249 (396)
331 3ncv_A DNA mismatch repair pro 28.6 2.8E+02 0.0095 23.7 9.9 120 15-161 85-218 (220)
332 1s4c_A Protein HI0227; double- 28.6 60 0.002 26.3 4.3 24 253-276 112-135 (155)
333 3rpe_A MDAB, modulator of drug 28.4 1.8E+02 0.0062 24.9 7.7 37 6-42 19-64 (218)
334 1xrs_B D-lysine 5,6-aminomutas 28.4 49 0.0017 29.7 4.0 39 11-50 119-169 (262)
335 2qs9_A Retinoblastoma-binding 28.0 2.1E+02 0.0073 22.2 8.4 118 27-151 24-168 (194)
336 1o7f_A CAMP-dependent RAP1 gua 27.8 72 0.0025 29.7 5.4 68 218-287 364-439 (469)
337 2fqx_A Membrane lipoprotein TM 27.7 2.9E+02 0.0099 24.2 9.3 82 11-98 3-93 (318)
338 1s8n_A Putative antiterminator 27.7 75 0.0026 25.7 4.9 40 1-42 1-41 (205)
339 3esg_A HUTD, putative uncharac 27.5 65 0.0022 27.6 4.5 36 229-270 139-174 (193)
340 3j21_Z 50S ribosomal protein L 27.4 89 0.003 23.2 4.8 32 14-46 34-66 (99)
341 2iuy_A Avigt4, glycosyltransfe 27.3 60 0.0021 28.5 4.5 36 12-47 3-56 (342)
342 2r60_A Glycosyl transferase, g 27.3 56 0.0019 30.6 4.5 35 11-45 6-57 (499)
343 2gek_A Phosphatidylinositol ma 27.2 68 0.0023 28.6 4.9 37 10-46 18-60 (406)
344 2xed_A Putative maleate isomer 27.1 1.5E+02 0.0052 26.1 7.1 64 13-82 147-221 (273)
345 4gi5_A Quinone reductase; prot 26.8 62 0.0021 29.1 4.5 36 11-46 21-63 (280)
346 4fzr_A SSFS6; structural genom 26.8 52 0.0018 29.8 4.1 40 7-46 10-51 (398)
347 2qh8_A Uncharacterized protein 26.7 1.8E+02 0.0063 25.0 7.6 80 11-95 7-97 (302)
348 1jbe_A Chemotaxis protein CHEY 26.2 1E+02 0.0035 22.2 5.1 32 10-43 2-34 (128)
349 2bgc_A PRFA; bacterial infecti 26.2 2E+02 0.0068 23.8 7.5 68 218-286 21-100 (238)
350 2rdm_A Response regulator rece 26.1 1E+02 0.0036 22.3 5.1 31 11-43 4-34 (132)
351 3m6m_D Sensory/regulatory prot 26.0 82 0.0028 23.8 4.6 33 10-44 12-44 (143)
352 1bdg_A Hexokinase; phosphotran 25.7 40 0.0014 32.5 3.1 62 20-87 168-229 (451)
353 3s4y_A Thiamin pyrophosphokina 25.7 1.2E+02 0.0041 26.6 6.1 52 28-79 81-133 (247)
354 2zay_A Response regulator rece 25.5 1.4E+02 0.0049 22.1 5.9 32 10-43 6-37 (147)
355 3ajx_A 3-hexulose-6-phosphate 25.3 41 0.0014 27.9 2.8 49 13-62 1-49 (207)
356 3na5_A Phosphoglucomutase; iso 25.3 1.2E+02 0.0042 29.9 6.7 45 14-58 104-153 (570)
357 3oti_A CALG3; calicheamicin, T 25.1 62 0.0021 29.3 4.2 40 7-46 15-56 (398)
358 3sqn_A Conserved domain protei 24.9 28 0.00097 33.7 1.9 20 67-86 396-415 (485)
359 1xru_A 4-deoxy-L-threo-5-hexos 24.9 3.8E+02 0.013 24.1 10.5 58 217-274 184-251 (282)
360 3lfh_A Manxa, phosphotransfera 24.9 96 0.0033 24.9 4.9 49 13-62 4-56 (144)
361 3lua_A Response regulator rece 24.6 2.1E+02 0.0072 21.0 8.4 33 11-45 3-36 (140)
362 2xij_A Methylmalonyl-COA mutas 24.4 84 0.0029 32.5 5.4 58 11-78 603-664 (762)
363 3k94_A Thiamin pyrophosphokina 23.9 1.1E+02 0.0039 26.4 5.5 61 14-79 25-103 (223)
364 3mel_A Thiamin pyrophosphokina 23.9 89 0.0031 27.0 4.8 62 14-79 24-103 (222)
365 3q9s_A DNA-binding response re 23.9 3.2E+02 0.011 22.9 10.1 31 12-44 37-67 (249)
366 3lm8_A Thiamine pyrophosphokin 23.8 1.2E+02 0.0041 26.1 5.6 61 14-79 26-104 (222)
367 3i42_A Response regulator rece 23.5 2.1E+02 0.007 20.5 7.0 31 12-44 3-33 (127)
368 4a6d_A Hydroxyindole O-methylt 23.3 39 0.0013 30.9 2.5 40 72-111 184-223 (353)
369 3r0j_A Possible two component 23.2 1.3E+02 0.0043 25.3 5.6 32 11-44 22-53 (250)
370 2i2x_B MTAC, methyltransferase 23.2 58 0.002 28.6 3.5 37 11-48 122-161 (258)
371 3d8t_A Uroporphyrinogen-III sy 23.1 3.1E+02 0.011 23.8 8.4 106 14-131 158-278 (286)
372 2jba_A Phosphate regulon trans 23.0 1.2E+02 0.0042 21.7 5.0 30 13-44 3-32 (127)
373 3hix_A ALR3790 protein; rhodan 22.7 74 0.0025 23.4 3.6 52 29-86 2-69 (106)
374 2gax_A Hypothetical protein AT 22.6 96 0.0033 24.8 4.4 58 14-78 58-120 (135)
375 1req_B Methylmalonyl-COA mutas 22.4 59 0.002 33.0 3.7 60 11-79 508-570 (637)
376 1req_A Methylmalonyl-COA mutas 22.0 78 0.0027 32.6 4.6 58 11-78 595-656 (727)
377 2q62_A ARSH; alpha/beta, flavo 22.0 3.3E+02 0.011 23.5 8.2 53 10-62 32-98 (247)
378 3gl9_A Response regulator; bet 21.6 1.4E+02 0.0047 21.7 5.0 30 13-44 3-32 (122)
379 3td9_A Branched chain amino ac 21.6 2.2E+02 0.0076 24.9 7.2 63 12-80 149-215 (366)
380 2pl1_A Transcriptional regulat 21.5 1.3E+02 0.0046 21.3 4.8 29 13-43 1-29 (121)
381 3lte_A Response regulator; str 21.4 1.5E+02 0.005 21.5 5.1 32 11-44 5-36 (132)
382 2yhx_A Hexokinase B; transfera 21.4 28 0.00095 33.7 1.1 105 25-137 164-298 (457)
383 2j48_A Two-component sensor ki 21.4 1.6E+02 0.0054 20.4 5.2 31 13-45 2-32 (119)
384 3f6c_A Positive transcription 21.2 92 0.0031 22.8 3.9 30 12-43 1-30 (134)
385 4g6h_A Rotenone-insensitive NA 21.2 61 0.0021 31.3 3.5 45 89-133 174-239 (502)
386 2b4a_A BH3024; flavodoxin-like 21.1 1.5E+02 0.005 21.8 5.1 33 10-44 13-45 (138)
387 3hcw_A Maltose operon transcri 21.1 2.4E+02 0.0082 24.0 7.2 65 10-79 5-78 (295)
388 3kto_A Response regulator rece 21.1 1.2E+02 0.004 22.4 4.6 33 11-45 5-37 (136)
389 1w41_A 50S ribosomal protein L 20.8 1E+02 0.0034 22.9 4.0 41 14-61 35-76 (101)
390 3qfm_A SAPH, putative uncharac 20.7 2.5E+02 0.0086 24.3 7.3 53 10-62 9-64 (270)
391 3qay_A Endolysin; amidase A/B 20.3 2.3E+02 0.008 23.2 6.6 39 12-50 1-60 (180)
392 3k2a_A Homeobox protein MEIS2; 20.2 21 0.00073 24.8 -0.0 38 125-165 7-44 (67)
393 1f0k_A MURG, UDP-N-acetylgluco 20.1 93 0.0032 27.4 4.3 35 12-46 6-42 (364)
394 2pln_A HP1043, response regula 20.0 2.6E+02 0.0088 20.3 10.0 33 9-43 15-47 (137)
No 1
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=100.00 E-value=1e-57 Score=385.66 Aligned_cols=139 Identities=35% Similarity=0.545 Sum_probs=134.3
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCC-----CCcchhHHHHHHhhcCCCCCCcceEEEEecCchhhhhhhc
Q 021698 13 LKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTS-----DYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVGVAIFAN 87 (309)
Q Consensus 13 mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~g~~-----~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G~~i~aN 87 (309)
|||+|||||+||+||+.|++||+++||||+|+|++ |||+++.+||++|++ |+++|||||||||+||||+||
T Consensus 1 MkI~igsDhaG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~V~~----g~~d~GIliCGTGiG~siaAN 76 (149)
T 3he8_A 1 MKIGIGSDHGGYNLKREIADFLKKRGYEVIDFGTHGNESVDYPDFGLKVAEAVKS----GECDRGIVICGTGLGISIAAN 76 (149)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHT----TSSSEEEEEESSSHHHHHHHH
T ss_pred CEEEEEECchhHHHHHHHHHHHHHCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHc----CCCCEEEEEcCCcHHHHHHhh
Confidence 89999999999999999999999999999999985 599999999999999 999999999999999999999
Q ss_pred CCCceEEEEeCCHHHHHHHHhhcCcceeeecccccCHHHHHHHHHHHhcCCCCCCCCCCCCchhhHHHHhHh
Q 021698 88 KNPGVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEILDTWLKTPFKAPCPASGLKPWDEKLSCFF 159 (309)
Q Consensus 88 K~~giraa~~~~~~~A~~~r~hNnaNvl~~g~~~~~~~~a~~i~~~~l~~~f~~~~~~~~~~~~l~~I~~~l 159 (309)
|+||||||+|+|+++|+|+|+||||||||||+|++|+++|++|+++||+|+|++ ++++++++.|.++-
T Consensus 77 Kv~GIRAAl~~d~~sA~~ar~hNnaNVl~lG~rvig~~~A~~iv~~fL~t~F~g----grh~~Rv~ki~~~e 144 (149)
T 3he8_A 77 KVPGIRAAVCTNSYMARMSREHNDANILALGERVVGLDLALDIVDTWLKAEFQG----GRHATRVGKIGEIE 144 (149)
T ss_dssp TSTTCCEEECSSHHHHHHHHHTTCCSEEEEETTTSCHHHHHHHHHHHHHCCCCC----THHHHHHHHHHHHH
T ss_pred cCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCHHHHHHHHHHHHcCCCCC----cchHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999997 68999999887654
No 2
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=100.00 E-value=2e-57 Score=389.80 Aligned_cols=146 Identities=34% Similarity=0.502 Sum_probs=134.4
Q ss_pred cCCCCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCC-----CCcchhHHHHHHhhcCCCCCCcceEEEEecCch
Q 021698 6 DAAAPHPLKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTS-----DYYSIGAEVGRRVSSSDSSETTTRGLVACGTGV 80 (309)
Q Consensus 6 ~~~~~~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~g~~-----~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~ 80 (309)
.++..++|||+|||||+||+||+.|++||+++||||+|+|++ |||++|.+||++|++ |+++|||||||||+
T Consensus 14 ~~~~~~~MkIaIgsDhaG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~V~~----g~~d~GIliCGTGi 89 (169)
T 3ph3_A 14 LVPRGSHMKIGIGSDHGGYNLKREIADFLKKRGYEVIDFGTHGNESVDYPDFGLKVAEAVKS----GECDRGIVICGTGL 89 (169)
T ss_dssp -------CEEEEEECGGGHHHHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHT----TSSSEEEEEESSSH
T ss_pred CcccCCCCEEEEEeCchHHHHHHHHHHHHHHCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHc----CCCCEEEEEcCCcH
Confidence 455568899999999999999999999999999999999985 599999999999999 99999999999999
Q ss_pred hhhhhhcCCCceEEEEeCCHHHHHHHHhhcCcceeeecccccCHHHHHHHHHHHhcCCCCCCCCCCCCchhhHHHHhHh
Q 021698 81 GVAIFANKNPGVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEILDTWLKTPFKAPCPASGLKPWDEKLSCFF 159 (309)
Q Consensus 81 G~~i~aNK~~giraa~~~~~~~A~~~r~hNnaNvl~~g~~~~~~~~a~~i~~~~l~~~f~~~~~~~~~~~~l~~I~~~l 159 (309)
||||+|||+||||||+|+|+++|+|+|+||||||||||+|++|+++|++|+++||+|+|++ ++++++++.|.++-
T Consensus 90 G~sIaANKv~GIRAAlc~d~~sA~~aR~hNnANVL~lG~Rvig~~lA~~Iv~~fL~t~F~g----gRh~~Rv~kI~~~e 164 (169)
T 3ph3_A 90 GISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERVVGLDLALDIVDTWLKAEFQG----GRHATRVGKIGEIE 164 (169)
T ss_dssp HHHHHHTTSTTCCEEECSSHHHHHHHHHTTCCSEEEEETTTSCHHHHHHHHHHHHHCCCCC----THHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCHHHHHHHHHHHHcCCCCC----CchHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999997 68999998887654
No 3
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=100.00 E-value=7.2e-58 Score=391.07 Aligned_cols=143 Identities=32% Similarity=0.444 Sum_probs=129.8
Q ss_pred CCCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCC-----CCcchhHHHHHHhhcCCCCCCcceEEEEecCchhh
Q 021698 8 AAPHPLKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTS-----DYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVGV 82 (309)
Q Consensus 8 ~~~~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~g~~-----~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G~ 82 (309)
+.+.+|||+|||||+||+||+.|++||+++||||+|+|++ |||+|+.+||++|++ |+++|||||||||+||
T Consensus 17 ~~~~~MkIaIgsDhaG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYPd~a~~va~~V~~----g~~d~GIliCGTGiG~ 92 (166)
T 3s5p_A 17 QGPGSMKVAFASDHGGRDLRMFLQQRASAHGYEVMDLGTESDASVDYPDFAKIGCEAVTS----GRADCCILVCGTGIGI 92 (166)
T ss_dssp --CTTCEEEEEECGGGHHHHHHHHHHHHHTTCEEEEEEC--------CHHHHHHHHHHHT----TSCSEEEEEESSSHHH
T ss_pred CCCCceEEEEEECchHHHHHHHHHHHHHHCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHc----CCCcEEEEEcCCcHHH
Confidence 3456699999999999999999999999999999999985 599999999999999 9999999999999999
Q ss_pred hhhhcCCCceEEEEeCCHHHHHHHHhhcCcceeeecccccCHHHHHHHHHHHhcCCCCCCCCCCCCchhhHHHHhH
Q 021698 83 AIFANKNPGVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEILDTWLKTPFKAPCPASGLKPWDEKLSCF 158 (309)
Q Consensus 83 ~i~aNK~~giraa~~~~~~~A~~~r~hNnaNvl~~g~~~~~~~~a~~i~~~~l~~~f~~~~~~~~~~~~l~~I~~~ 158 (309)
||+|||+||||||+|+|+++|+|+|+||||||||||+|++|+++|++|+++||+|+|++ +++++++++|.++
T Consensus 93 sIaANKv~GIRAAlc~d~~sA~laR~hNnANVL~lG~Rvig~~lA~~Iv~~fL~t~F~g----gRH~~RV~kI~~~ 164 (166)
T 3s5p_A 93 SIAANKMKGIRCALCSTEYDAEMARKHNNANALALGGRTTGPEVAASILSRFLSTNFEG----GRHAARIAKISAM 164 (166)
T ss_dssp HHHHHTSTTCCEEECSSHHHHHHHHHTTCCCEEEEETTTSCHHHHHHHHHHHHHCCCCH----HHHHTCCCC----
T ss_pred HHHhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCHHHHHHHHHHHHcCCCCC----cchHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999997 6788777776543
No 4
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=100.00 E-value=2.1e-57 Score=393.58 Aligned_cols=149 Identities=29% Similarity=0.419 Sum_probs=137.8
Q ss_pred cCCCC-CCcEEEEEeCcccHHHHHHHHHHHHhCC--CcEEEecCC------CCcchhHHHHHHhhcCCCCCCcceEEEEe
Q 021698 6 DAAAP-HPLKIIAGADSFGAELKDALVSHLRSLN--IDVEDLGTS------DYYSIGAEVGRRVSSSDSSETTTRGLVAC 76 (309)
Q Consensus 6 ~~~~~-~~mkI~ig~D~~g~~lk~~l~~~l~~~g--~~v~d~g~~------~y~~~a~~va~~v~~~~~~~~~~~gi~~c 76 (309)
|++.+ ++|||+|||||+||+||+.|++||+++| |||+|+|++ |||+|+.+||++|++ |+++||||||
T Consensus 22 ~~~~~~~~MkIaIgsDHaG~~LK~~i~~~L~~~G~g~eV~D~G~~s~~e~~DYPd~a~~vA~~V~~----ge~d~GIliC 97 (184)
T 3sgw_A 22 MAATPLPPLRLAIACDDAGVSYKEALKAHLSDNPLVSSITDVGVTSTTDKTAYPHVAIQAAQLIKD----GKVDRALMIC 97 (184)
T ss_dssp -----CCCEEEEEEECGGGHHHHHHHHHHHTTCTTEEEEEECSCCSTTCCCCHHHHHHHHHHHHHT----TSCSEEEEEE
T ss_pred cCCCCCCCcEEEEEECchhHHHHHHHHHHHHhCCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHc----CCCcEEEEEc
Confidence 66666 8899999999999999999999999999 799999986 699999999999999 9999999999
Q ss_pred cCchhhhhhhcCCCceEEEEeCCHHHHHHHHhhcCcceeeecccccCHHHHHHHHHHHhcCCCCCCCCCCCCchhhHHHH
Q 021698 77 GTGVGVAIFANKNPGVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEILDTWLKTPFKAPCPASGLKPWDEKLS 156 (309)
Q Consensus 77 gtG~G~~i~aNK~~giraa~~~~~~~A~~~r~hNnaNvl~~g~~~~~~~~a~~i~~~~l~~~f~~~~~~~~~~~~l~~I~ 156 (309)
|||+||||+|||+||||||+|+|+++|+|+|+||||||||||+|++|+++|++|+++||+|+|++ .+++++++++|.
T Consensus 98 GTGiG~sIaANKv~GIRAAlc~d~~sA~laR~HNnANVL~lG~Rvig~elA~~Ivd~fL~t~Feg---ggRH~~RV~kI~ 174 (184)
T 3sgw_A 98 GTGLGVAISANKVPGIRAVTAHDTFSVERAILSNDAQVLCFGQRVIGIELAKRLAGEWLTYRFDQ---KSASAQKVQAIS 174 (184)
T ss_dssp SSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHTTCCSEEEEETTTSCHHHHHHHHHHHTTCCCCT---TSHHHHHHHHHH
T ss_pred CCcHHHhhhhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEchhhcCHHHHHHHHHHHHcCCCCC---CchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999985 469999999998
Q ss_pred hHhhh
Q 021698 157 CFFDK 161 (309)
Q Consensus 157 ~~l~~ 161 (309)
++-.+
T Consensus 175 ~~E~~ 179 (184)
T 3sgw_A 175 DYEKK 179 (184)
T ss_dssp HHHTT
T ss_pred HHHHh
Confidence 76543
No 5
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=100.00 E-value=4.6e-57 Score=382.05 Aligned_cols=139 Identities=34% Similarity=0.489 Sum_probs=134.0
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCC-----CCcchhHHHHHHhhcCCCCCCcceEEEEecCchhhhhhhc
Q 021698 13 LKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTS-----DYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVGVAIFAN 87 (309)
Q Consensus 13 mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~g~~-----~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G~~i~aN 87 (309)
|||+|||||+||+||+.|++||+++||||+|+|++ |||+++.+||++|++ |+++|||||||||+||||+||
T Consensus 2 MkIaigsDhaG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~V~~----g~~d~GIliCGTGiG~siaAN 77 (149)
T 2vvr_A 2 KKIAFGCDHVGFILKHEIVAHLVERGVEVIDKGTWSSERTDYPHYASQVALAVAG----GEVDGGILICGTGVGISIAAN 77 (149)
T ss_dssp CEEEEEECTTGGGGHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHT----TSSSEEEEEESSSHHHHHHHH
T ss_pred cEEEEEeCchhHHHHHHHHHHHHHCCCEEEEeCCCCCCCCChHHHHHHHHHHHHc----CCCceEEEEeCCcHHHHHHHh
Confidence 89999999999999999999999999999999984 599999999999999 999999999999999999999
Q ss_pred CCCceEEEEeCCHHHHHHHHhhcCcceeeecccccCHHHHHHHHHHHhcCCCCCCCCCCCCchhhHHHHhHh
Q 021698 88 KNPGVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEILDTWLKTPFKAPCPASGLKPWDEKLSCFF 159 (309)
Q Consensus 88 K~~giraa~~~~~~~A~~~r~hNnaNvl~~g~~~~~~~~a~~i~~~~l~~~f~~~~~~~~~~~~l~~I~~~l 159 (309)
|+||||||+|+|+++|+|+|+||||||||||+|++|+++|++|+++||+|+|++ ++++++++.|.++-
T Consensus 78 Kv~GIRAal~~d~~sA~~ar~hNnaNVl~lG~rvig~ela~~iv~~fL~t~f~g----grh~~Rv~ki~~~e 145 (149)
T 2vvr_A 78 KFAGIRAVVCSEPYSAQLSRQNNDTNVLAFGSRVVGLELAKMIVDAWLGAQYEG----GRHQQRVEAITAIE 145 (149)
T ss_dssp TSTTCCEEECSSHHHHHHHHHHHCCCEEEEETTTBCHHHHHHHHHHHHHCCCCC----TTHHHHHHHHHHHH
T ss_pred cCCCeEEEEeCCHHHHHHHHHhCCCcEEEECccccCHHHHHHHHHHHHcCCCCC----ccHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999997 69999999887653
No 6
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=100.00 E-value=1.7e-56 Score=379.57 Aligned_cols=138 Identities=36% Similarity=0.508 Sum_probs=132.4
Q ss_pred CCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCC-----CCcchhHHHHHHhhcCCCCCCcceEEEEecCchhhhhh
Q 021698 11 HPLKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTS-----DYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVGVAIF 85 (309)
Q Consensus 11 ~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~g~~-----~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G~~i~ 85 (309)
...||+|||||+||+||+.|++||+++||||+|+|++ |||+++.+||++|++ |+++|||||||||+||||+
T Consensus 11 ~~~~i~igsDhaG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~V~~----g~~d~GIliCGTGiG~sia 86 (155)
T 1o1x_A 11 HHVKIAIASDHAAFELKEKVKNYLLGKGIEVEDHGTYSEESVDYPDYAKKVVQSILS----NEADFGILLCGTGLGMSIA 86 (155)
T ss_dssp CCCEEEEEECSTTHHHHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHT----TSCSEEEEEESSSHHHHHH
T ss_pred cceeEEEeeCchHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCChHHHHHHHHHHHHc----CCCceEEEEcCCcHHHHHH
Confidence 4579999999999999999999999999999999984 599999999999999 9999999999999999999
Q ss_pred hcCCCceEEEEeCCHHHHHHHHhhcCcceeeecccccCHHHHHHHHHHHhcCCCCCCCCCCCCchhhHHHH
Q 021698 86 ANKNPGVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEILDTWLKTPFKAPCPASGLKPWDEKLS 156 (309)
Q Consensus 86 aNK~~giraa~~~~~~~A~~~r~hNnaNvl~~g~~~~~~~~a~~i~~~~l~~~f~~~~~~~~~~~~l~~I~ 156 (309)
|||+||||||+|+|+++|+|+|+||||||||||+|++|+++|++|+++||+|+|++ ++++++++.|.
T Consensus 87 ANKv~GIRAAl~~d~~sA~~ar~hNnANVL~lG~rvig~elA~~Iv~~fL~t~F~g----gRh~~RV~ki~ 153 (155)
T 1o1x_A 87 ANRYRGIRAALCLFPDMARLARSHNNANILVLPGRLIGAELAFWIVDTFLSTPFDG----GRHERRIRKID 153 (155)
T ss_dssp HTTSTTCCEEECSSHHHHHHHHHTTCCSEEEEETTTSCHHHHHHHHHHHHHCCCCC----TTHHHHHHHHT
T ss_pred hhcCCCeEEEEeCCHHHHHHHHHcCCCcEEEECCcccCHHHHHHHHHHHHcCCCCC----ccHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999997 68888887764
No 7
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=100.00 E-value=1.3e-56 Score=387.05 Aligned_cols=144 Identities=26% Similarity=0.359 Sum_probs=136.4
Q ss_pred CCCcEEEEEeCcccHHHHHHHHHHHHh--CCCcEEEecCC-----CCcchhHHHHHHhhcCCCCCCcceEEEEecCchhh
Q 021698 10 PHPLKIIAGADSFGAELKDALVSHLRS--LNIDVEDLGTS-----DYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVGV 82 (309)
Q Consensus 10 ~~~mkI~ig~D~~g~~lk~~l~~~l~~--~g~~v~d~g~~-----~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G~ 82 (309)
++.|||+|||||+||+||+.|++||++ +||||+|+|++ |||+||.+||++|++ |+++|||||||||+||
T Consensus 20 ~M~MkIaIgsDhaG~~lK~~i~~~L~~~~~G~eV~D~G~~s~~s~DYPd~a~~vA~~V~~----g~~d~GIliCGTGiG~ 95 (179)
T 3k7p_A 20 HMTRRVAIGTDHPAFAIHENLILYVKEAGDEFVPVYCGPKTAESVDYPDFASRVAEMVAR----KEVEFGVLAAGSGIGM 95 (179)
T ss_dssp -CCEEEEEEECTGGGGGHHHHHHHHHHTCTTEEEEECSCSSSSCCCHHHHHHHHHHHHHT----TSSSEEEEEESSSHHH
T ss_pred cCceEEEEEECchHHHHHHHHHHHHHhcCCCCeEEEcCCCCCCCCCHHHHHHHHHHHHHc----CCCCEEEEEccCcHHH
Confidence 456899999999999999999999999 99999999985 599999999999999 9999999999999999
Q ss_pred hhhhcCCCceEEEEeCCHHHHHHHHhhcCcceeeecccccCHHHHHHHHHHHhcCCCCCCCCCCCCchhhHHHHhHhh
Q 021698 83 AIFANKNPGVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEILDTWLKTPFKAPCPASGLKPWDEKLSCFFD 160 (309)
Q Consensus 83 ~i~aNK~~giraa~~~~~~~A~~~r~hNnaNvl~~g~~~~~~~~a~~i~~~~l~~~f~~~~~~~~~~~~l~~I~~~l~ 160 (309)
+|+|||+||||||+|+|+++|+|+|+||||||||||+|++|+++|++|+++||+|+|++ .++++++++.|.++-.
T Consensus 96 sIaANKv~GIRAAlc~d~~sA~laR~HNnANVL~lG~Rvig~elA~~Ivd~fL~t~Feg---~gRH~~RV~kI~~~E~ 170 (179)
T 3k7p_A 96 SIAANKVPGVRAALCHDHYTAAMSRIHNDANIVCVGERTTGVEVIREIIITFLQTPFSG---EERHVRRIEKIRAIEA 170 (179)
T ss_dssp HHHHHTSTTCCEEECCSHHHHHHHHHTTCCSEEEEETTTSCHHHHHHHHHHHHHCCCCC---CHHHHHHHHHHHHHHH
T ss_pred hhHhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCHHHHHHHHHHHHcCCCCC---CCchHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999986 5689999988877643
No 8
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=100.00 E-value=3.7e-56 Score=380.94 Aligned_cols=142 Identities=26% Similarity=0.399 Sum_probs=134.9
Q ss_pred CcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCC------CCcchhHHHHHHhhcCCCCCCcceEEEEecCchhhhhh
Q 021698 12 PLKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTS------DYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVGVAIF 85 (309)
Q Consensus 12 ~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~g~~------~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G~~i~ 85 (309)
+|||+|||||+||+||+.|++||+++||||+|+|++ |||+++.+||++|++ |+++|||||||||+||||+
T Consensus 3 ~MkIaigsDhaG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~~dYpd~a~~va~~V~~----g~~d~GIliCGTGiG~sia 78 (162)
T 2vvp_A 3 GMRVYLGADHAGYELKQRIIEHLKQTGHEPIDCGALRYDADDDYPAFCIAAATRTVA----DPGSLGIVLGGSGNGEQIA 78 (162)
T ss_dssp CCEEEEEECHHHHHHHHHHHHHHHHTTCEEEECSCCSCCTTCCHHHHHHHHHHHHHH----STTCEEEEEESSSHHHHHH
T ss_pred CCEEEEEeCchhHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCChHHHHHHHHHHHHc----CCCceEEEEeCCcHHHHHH
Confidence 389999999999999999999999999999999963 599999999999999 9999999999999999999
Q ss_pred hcCCCceEEEEeCCHHHHHHHHhhcCcceeeecccccCHHHHHHHHHHHhcCCCCCCCCCCCCchhhHHHHhHhh
Q 021698 86 ANKNPGVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEILDTWLKTPFKAPCPASGLKPWDEKLSCFFD 160 (309)
Q Consensus 86 aNK~~giraa~~~~~~~A~~~r~hNnaNvl~~g~~~~~~~~a~~i~~~~l~~~f~~~~~~~~~~~~l~~I~~~l~ 160 (309)
|||+||||||+|+|+++|+|+|+||||||||||+|++|+++|++|+++||+|+|++ .++++++++.|.++-.
T Consensus 79 ANKv~GIRAAl~~d~~sA~~ar~hNnaNVL~lG~rvig~elA~~iv~~fL~t~F~g---g~rh~~Rv~ki~~~e~ 150 (162)
T 2vvp_A 79 ANKVPGARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAFVTTPWSK---AQRHQRRIDILAEYER 150 (162)
T ss_dssp HHTSTTCCEEECCSHHHHHHHHHTTCCSEEEEEGGGSCHHHHHHHHHHHHHSCCCC---CHHHHHHHHHHHHHHH
T ss_pred HhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCHHHHHHHHHHHHcCCCCC---ChhHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999997 3489999998876644
No 9
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=100.00 E-value=5.8e-56 Score=373.94 Aligned_cols=135 Identities=31% Similarity=0.430 Sum_probs=128.0
Q ss_pred CcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCC------CCcchhHHHHHHhhcCCCCCCcceEEEEecCchhhhhh
Q 021698 12 PLKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTS------DYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVGVAIF 85 (309)
Q Consensus 12 ~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~g~~------~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G~~i~ 85 (309)
.|||+|||||+||+||+.|++||+++||||+|+|++ |||+++.+||++|+ +++|||||||||+||||+
T Consensus 7 ~mkI~igsDhaG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~~dYpd~a~~va~~V~------~~d~GIliCGTGiG~sia 80 (148)
T 4em8_A 7 VKRVFLSSDHAGVELRLFLSAYLRDLGCEVFDCGCDPKEHSVDYPDYVHDVVREVS------DTSFGVLICGTGIGMSIA 80 (148)
T ss_dssp CSEEEEEECGGGHHHHHHHHHHHHHTTCEEEECCCCTTCSCCCGGGGTHHHHTTCB------TTBEEEEEESSSHHHHHH
T ss_pred eeEEEEEECchhHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCChHHHHHHHHHHHH------HhCeEEEEccCcHHHHHH
Confidence 479999999999999999999999999999999973 49999999999998 479999999999999999
Q ss_pred hcCCCceEEEEeCCHHHHHHHHhhcCcceeeecccccCHHHHHHHHHHHhcCCCCCCCCCCCCchhhHHHH
Q 021698 86 ANKNPGVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEILDTWLKTPFKAPCPASGLKPWDEKLS 156 (309)
Q Consensus 86 aNK~~giraa~~~~~~~A~~~r~hNnaNvl~~g~~~~~~~~a~~i~~~~l~~~f~~~~~~~~~~~~l~~I~ 156 (309)
|||+||||||+|+|+++|+|+|+||||||||||+|++|+++|++|+++||+|+|++ +++++++++|.
T Consensus 81 ANKv~GIRAAl~~d~~sA~~ar~hNnANVL~lG~rvig~~lA~~iv~~fL~t~F~g----grh~~Rv~ki~ 147 (148)
T 4em8_A 81 ANRHKNIRAALCSSTMLAKLSREHNDANVLCFGSRYIDPDTAQSVLYTFMTTAFLG----GRHAVRVQKLG 147 (148)
T ss_dssp HTTSTTCCEEECSSHHHHHHHHHHHCCCEEEEETTTSCHHHHHHHHHHHHHCCCCC----THHHHHHHHHT
T ss_pred HhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEchhhhCHHHHHHHHHHHHcCCCCC----CchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999997 58887777664
No 10
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=100.00 E-value=2.3e-52 Score=371.36 Aligned_cols=138 Identities=20% Similarity=0.275 Sum_probs=131.2
Q ss_pred CCcEEEEEeCcccHHHH-----HHHHHHHHhCCCcEEEecCC--------CCcchhHHHHHHhhcCCCCCCcceEEEEec
Q 021698 11 HPLKIIAGADSFGAELK-----DALVSHLRSLNIDVEDLGTS--------DYYSIGAEVGRRVSSSDSSETTTRGLVACG 77 (309)
Q Consensus 11 ~~mkI~ig~D~~g~~lk-----~~l~~~l~~~g~~v~d~g~~--------~y~~~a~~va~~v~~~~~~~~~~~gi~~cg 77 (309)
+.|||+|||||+ ++|| +.|++||+++||||+|+|++ |||++|.+||++|.+ |+++|||+|||
T Consensus 2 ~~MkIaIgsDha-~~lKn~ilk~~i~~~L~~~G~eV~D~G~~s~~d~~s~DYPd~a~~vA~~V~~----g~~d~GIliCG 76 (216)
T 2ppw_A 2 NAMKIALINENS-QASKNHIIYDSLKEATDKKGYQLFNYGMRGEEGESQLTYVQNGLMAAILLNT----KAVDFVVTGCG 76 (216)
T ss_dssp -CCEEEECCCTT-TGGGHHHHHHHHHHHHHHHTCEEEECSCCSCTTCCCCCHHHHHHHHHHHHHT----TSCSEEEEEES
T ss_pred CCcEEEEEcCCh-HhhhhhhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHc----CCCCeEEEEcC
Confidence 359999999999 9988 89999999999999999985 499999999999999 99999999999
Q ss_pred CchhhhhhhcCCCceEEEEeCCHHHHHHHHhhcCcceeeecc-ccc--CHHHH-HHHHHHHhcCCCCCCCCCCCCchhhH
Q 021698 78 TGVGVAIFANKNPGVFATTCLTPADALNTRSINNCNVLAVSG-MST--SKESA-VEILDTWLKTPFKAPCPASGLKPWDE 153 (309)
Q Consensus 78 tG~G~~i~aNK~~giraa~~~~~~~A~~~r~hNnaNvl~~g~-~~~--~~~~a-~~i~~~~l~~~f~~~~~~~~~~~~l~ 153 (309)
||+||||+|||+||||||+|+|+++|+|+|+||||||||||+ |++ |+++| ++|+++||+|+|++|||.++.+|...
T Consensus 77 TGiG~sIAANKv~GIRAAlc~d~~sA~laR~HNnANVL~lG~~rvi~~g~ela~~~Iv~~fL~t~F~gG~~~~R~~~~~r 156 (216)
T 2ppw_A 77 TGVGAMLALNSFPGVVCGLAVDPTDAYLYSQINGGNALSIPYAKGFGWGAELTLKLMFERLFAEEMGGGYPRERVIPEQR 156 (216)
T ss_dssp SSHHHHHHHTTSTTCCEEECSSHHHHHHHHHHTCCSEEEEESSTTCCTTHHHHHHHHHHHHHSSCTTCCSSGGGHHHHHH
T ss_pred CcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhcCceEEEeCCceecccCHHHHHHHHHHHHHcCCcCCCCChHHHhHHHH
Confidence 999999999999999999999999999999999999999999 988 99999 79999999999999999999887644
No 11
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=100.00 E-value=3.6e-52 Score=369.65 Aligned_cols=138 Identities=25% Similarity=0.347 Sum_probs=131.5
Q ss_pred CCcEEEEEeCcccHHHHH-----HHHHHHHhCCCcEEEec--CC-----CCcchhHHHHHHhhcCCCCCCcceEEEEecC
Q 021698 11 HPLKIIAGADSFGAELKD-----ALVSHLRSLNIDVEDLG--TS-----DYYSIGAEVGRRVSSSDSSETTTRGLVACGT 78 (309)
Q Consensus 11 ~~mkI~ig~D~~g~~lk~-----~l~~~l~~~g~~v~d~g--~~-----~y~~~a~~va~~v~~~~~~~~~~~gi~~cgt 78 (309)
++|||+|||||+ ++||+ .|++||+++||||+|+| ++ |||++|.+||++|.+ |+++|||+||||
T Consensus 2 ~~MkIaigsDha-~~lK~~~i~~~l~~~L~~~G~eV~D~G~~~~~~~~~dYpd~a~~vA~~V~~----g~~d~GIliCGT 76 (214)
T 3ono_A 2 NAMKIALMMENS-QAAKNAMVAGELNSVAGGLGHDVFNVGMTDENDHHLTYIHLGIMASILLNS----KAVDFVVTGCGT 76 (214)
T ss_dssp CCCEEEECCCGG-GGGGHHHHHHHHHHHHHHTTCEEEECSCSSTTSSCCCHHHHHHHHHHHHHT----TSCSEEEEEESS
T ss_pred CccEEEEECCCc-HHHHChhHHHHHHHHHHHCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHHc----CCCCEEEEEcCC
Confidence 579999999999 99999 99999999999999999 33 699999999999999 999999999999
Q ss_pred chhhhhhhcCCCceEEEEeCCHHHHHHHHhhcCcceeeeccc---ccCHHHHHH-HHHHHhcCCCCCCCCCCCCchhhH
Q 021698 79 GVGVAIFANKNPGVFATTCLTPADALNTRSINNCNVLAVSGM---STSKESAVE-ILDTWLKTPFKAPCPASGLKPWDE 153 (309)
Q Consensus 79 G~G~~i~aNK~~giraa~~~~~~~A~~~r~hNnaNvl~~g~~---~~~~~~a~~-i~~~~l~~~f~~~~~~~~~~~~l~ 153 (309)
|+||+|+|||+||||||+|+|+++|+|+|+||||||||||+| ++|+++|.+ |+++||+|+|++|||.++.++...
T Consensus 77 GiG~siaANKv~GIRAAlc~d~~sA~laR~hNnANVL~lG~rr~~~ig~elA~~~Ivd~fL~t~F~gGr~~~R~~~~~r 155 (214)
T 3ono_A 77 GQGALMSCNLHPGVVCGYCLEPSDAFLFNQINNGNAISLAFAKGFGWAGELNVRYIFEKAFTGKRGEGYPIERAAPQQA 155 (214)
T ss_dssp SHHHHHHHHTSTTCCEEECSSHHHHHHHHHHTCCSEEEEESSTTCCTTHHHHHHHHHHHHSSSCCCCCSSGGGHHHHHH
T ss_pred cHHHHHHHhcCCCeEEEEeCCHHHHHHHHHHcCCcEEEecCcccccccHHHHHHHHHHHHHcCCcCCCCChhHHHHHHH
Confidence 999999999999999999999999999999999999999996 799999985 999999999999999999887644
No 12
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=9.3e-49 Score=349.79 Aligned_cols=139 Identities=21% Similarity=0.281 Sum_probs=131.3
Q ss_pred CCcEEEEEeCcccH--HHHHHHHHHHHhCCCcEEEecCC--------CCcchhHHHHHHhhcCCCCCCcceEEEEecCch
Q 021698 11 HPLKIIAGADSFGA--ELKDALVSHLRSLNIDVEDLGTS--------DYYSIGAEVGRRVSSSDSSETTTRGLVACGTGV 80 (309)
Q Consensus 11 ~~mkI~ig~D~~g~--~lk~~l~~~l~~~g~~v~d~g~~--------~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~ 80 (309)
++.+|++++|.+|. .||+.|++||+++||||+|+|++ |||++|.+||++|.+ |+++|||+|||||+
T Consensus 20 mkiali~~~sqa~kN~~lKe~i~~~L~~~G~eV~D~G~~s~~d~~svDYPd~a~~vA~~V~~----g~~d~GIliCGTGi 95 (231)
T 3c5y_A 20 MKIALIIENSQAAKNAVVHEALTTVAEPLGHKVFNYGMYTAEDKASLTYVMNGLLAGILLNS----GAADFVVTGCGTGM 95 (231)
T ss_dssp CEEEECCCGGGGGGHHHHHHHHHHHHGGGTCEEEECCCCSTTCSSCCCHHHHHHHHHHHHHH----TSCSEEEEEESSSH
T ss_pred ceEEEEecCCHhhhHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHc----CCCCeEEEEcCCcH
Confidence 44556778999999 99999999999999999999985 499999999999999 99999999999999
Q ss_pred hhhhhhcCCCceEEEEeCCHHHHHHHHhhcCcceeeecc-ccc--CHHHH-HHHHHHHhcCCCCCCCCCCCCchhhH
Q 021698 81 GVAIFANKNPGVFATTCLTPADALNTRSINNCNVLAVSG-MST--SKESA-VEILDTWLKTPFKAPCPASGLKPWDE 153 (309)
Q Consensus 81 G~~i~aNK~~giraa~~~~~~~A~~~r~hNnaNvl~~g~-~~~--~~~~a-~~i~~~~l~~~f~~~~~~~~~~~~l~ 153 (309)
||||+|||+||||||+|+|+++|+|+|+||||||||||+ |++ |+++| ++|+++||+|+|++|||.++.+|...
T Consensus 96 G~sIAANKv~GIRAAlc~d~~sA~laR~HNnANVL~lGa~rvig~g~elA~~~Ivd~fL~teFeGGypq~R~~~~~r 172 (231)
T 3c5y_A 96 GSMLAANAMPGVFCGLVIDPTDAFLFGQINDGNAISMPYSKGFGWAAELNLQDVYRKLFDGERGLGYPRERAEIMRK 172 (231)
T ss_dssp HHHHHHHTSTTCCEEECCSHHHHHHHHHHTCCSEEEEESSTTCCTTHHHHHHHHHHHHHSSCCCCCSSGGGHHHHHH
T ss_pred HHHHHHhcCCCeEEEEeCCHHHHHHHHHhcCccEEEECCceecccCHHHHHHHHHHHHHcCCcCCCCCchhhhHHHH
Confidence 999999999999999999999999999999999999999 988 99999 69999999999999999999987754
No 13
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.48 E-value=1.9e-13 Score=106.34 Aligned_cols=82 Identities=23% Similarity=0.230 Sum_probs=70.0
Q ss_pred cCCceEEEeeeCCCe--EEEEEcCCCcCCccccCcc-EEEEEEeCEEEEEEEeCC--eEEEecCCcEEEECCCCcEEEEE
Q 021698 201 IPGGSMKIIRESPTS--AIVRFKAGSVEPAHHHTFG-HDLVVLEGKKSVWNLTKG--ERFDLTVGDYLFTPAGDVHRVKY 275 (309)
Q Consensus 201 ~pgg~~~il~~~~~~--~~v~l~pG~~~p~H~H~~~-e~vyVl~G~l~v~~~~~~--~~~~L~pGd~i~iP~g~~H~~~n 275 (309)
+|++..+++...... ..++++||+..++|.|+.. |++||++|++++ .+++ +.+.|++||++|+|+|++|+++|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~--~~~~g~~~~~l~~Gd~~~~p~~~~H~~~N 81 (97)
T 2fqp_A 4 RPGAIPTVQIDNERVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLL--ETPEGSVTSQLTRGVSYTRPEGVEHNVIN 81 (97)
T ss_dssp CCBCEEEEEEESSSEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEE--EETTEEEEEEECTTCCEEECTTCEEEEEC
T ss_pred cCCCceeEEEcCCeEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEE--EeCCCCEEEEEcCCCEEEeCCCCcccCEe
Confidence 577888877666553 6788999999999999987 488999999999 6777 78999999999999999999999
Q ss_pred cCCeEEEEE
Q 021698 276 YEETEFFIK 284 (309)
Q Consensus 276 ~~d~~~~i~ 284 (309)
.+++.+.++
T Consensus 82 ~g~~~~~~l 90 (97)
T 2fqp_A 82 PSDTEFVFV 90 (97)
T ss_dssp CSSSCEEEE
T ss_pred CCCCcEEEE
Confidence 997766544
No 14
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.48 E-value=4.1e-13 Score=107.87 Aligned_cols=67 Identities=24% Similarity=0.328 Sum_probs=62.3
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i~ 284 (309)
..++++||...++|+|+..|++||++|++++ .++++++.|++||++++|+|++|+++|.++..++++
T Consensus 39 ~~~~l~~G~~~~~H~H~~~e~~~Vl~G~~~~--~i~~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~ 105 (114)
T 3fjs_A 39 MRMVLPAGKQVGSHSVAGPSTIQCLEGEVEI--GVDGAQRRLHQGDLLYLGAGAAHDVNAITNTSLLVT 105 (114)
T ss_dssp EEEEECTTCEEEEECCSSCEEEEEEESCEEE--EETTEEEEECTTEEEEECTTCCEEEEESSSEEEEEE
T ss_pred EEEEECCCCccCceeCCCcEEEEEEECEEEE--EECCEEEEECCCCEEEECCCCcEEEEeCCCcEEEEE
Confidence 6788999999999999999999999999999 789999999999999999999999999998877643
No 15
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.46 E-value=1.2e-12 Score=104.02 Aligned_cols=95 Identities=18% Similarity=0.165 Sum_probs=76.1
Q ss_pred eeecCCCCceeecCCceEEEeeeCCC--eEEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEEC
Q 021698 189 LVKNRELNPVEMIPGGSMKIIRESPT--SAIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTP 266 (309)
Q Consensus 189 l~~~~~~~~~~~~pgg~~~il~~~~~--~~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP 266 (309)
+.+..+.+.....+|...+++..... ...++++||...++|+|+..|++||++|++++ .++++.+.|++||++++|
T Consensus 8 ~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~--~~~~~~~~l~~Gd~~~ip 85 (116)
T 2pfw_A 8 FSFGEQTEIEDIGGGLKRQMLGFNHELMAVKIWFDKGAEGYVHAHRHSQVSYVVEGEFHV--NVDGVIKVLTAGDSFFVP 85 (116)
T ss_dssp EECTTTSCCEECSTTEEEEEEEEETTEEEEEEEECTTEEEEEECCSSEEEEEEEEECEEE--EETTEEEEECTTCEEEEC
T ss_pred EecccCceeeeCCCCeEEEEEecCCceEEEEEEECCCCcCCcEECCcceEEEEEeeEEEE--EECCEEEEeCCCCEEEEC
Confidence 44455555555556666676653333 25678899999999999999999999999999 679999999999999999
Q ss_pred CCCcEEEEEcCCeEEEEEE
Q 021698 267 AGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 267 ~g~~H~~~n~~d~~~~i~~ 285 (309)
+|++|+++|.++..++.+.
T Consensus 86 ~~~~H~~~~~~~~~~l~v~ 104 (116)
T 2pfw_A 86 PHVDHGAVCPTGGILIDTF 104 (116)
T ss_dssp TTCCEEEEESSCEEEEEEE
T ss_pred cCCceeeEeCCCcEEEEEE
Confidence 9999999999877665443
No 16
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.43 E-value=1.5e-12 Score=113.21 Aligned_cols=141 Identities=13% Similarity=0.052 Sum_probs=96.5
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhhHHHHhHhhhhccccccccCCCCCCCCCCCCccceeeeeecCCCCc---e-eecCCc
Q 021698 129 EILDTWLKTPFKAPCPASGLKPWDEKLSCFFDKSMTEMPLIGKNDKLDSDSSGSTCSICCLVKNRELNP---V-EMIPGG 204 (309)
Q Consensus 129 ~i~~~~l~~~f~~~~~~~~~~~~l~~I~~~l~~s~~el~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~-~~~pgg 204 (309)
..+..|.+-.-. .++...+.+|+++|++++.+|+..+.+...+ . ..+++..+... . ....+.
T Consensus 38 ~~ls~~e~g~~~-----~p~~~~l~~ia~~l~~~~~~l~~~~~~~~~~-----~----~~~~~~~e~~~~~~~~~~~~~~ 103 (198)
T 2bnm_A 38 ETVAAWENGEGG-----ELTLTQLGRIAHVLGTSIGALTPPAGNDLDD-----G----VIIQMPDERPILKGVRDNVDYY 103 (198)
T ss_dssp HHHHHHHTTTCT-----TCBHHHHHHHHHHTTSCTGGGSCCCCCCCBT-----T----BCCCCGGGCCEECCSTTCSTTE
T ss_pred HHHHHHHcCCCC-----CCCHHHHHHHHHHhCCCHHHEEccCCCCccc-----C----ceEEeecccccccccccCCCce
Confidence 346666665431 3677888999999999999998754210001 0 01222222211 1 112333
Q ss_pred eEEEeeeCC---C--eEEEEEcCCCcCC---ccccCccEEEEEEeCEEEEEEEeCC----eEEEecCCcEEEECCCCcEE
Q 021698 205 SMKIIRESP---T--SAIVRFKAGSVEP---AHHHTFGHDLVVLEGKKSVWNLTKG----ERFDLTVGDYLFTPAGDVHR 272 (309)
Q Consensus 205 ~~~il~~~~---~--~~~v~l~pG~~~p---~H~H~~~e~vyVl~G~l~v~~~~~~----~~~~L~pGd~i~iP~g~~H~ 272 (309)
.+..+.... . ...++++||...+ +|+|+..|++||++|++++ .+++ +.+.|++||++++|++++|+
T Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~pg~~~~~~~~h~h~~~E~~~Vl~G~~~~--~~~~~~~~~~~~l~~GD~~~~~~~~~H~ 181 (198)
T 2bnm_A 104 VYNCLVRTKRAPSLVPLVVDVLTDNPDDAKFNSGHAGNEFLFVLEGEIHM--KWGDKENPKEALLPTGASMFVEEHVPHA 181 (198)
T ss_dssp EEEECCCCTTSTTCEEEEEEECCCCGGGCCCCCCCSSCEEEEEEESCEEE--EESCTTSCEEEEECTTCEEEECTTCCEE
T ss_pred EEEeeccCCCCCcceEEEEEEcCCCCCcccccccCCCeEEEEEEeeeEEE--EECCcCCcccEEECCCCEEEeCCCCceE
Confidence 445553321 1 2567899998875 7999999999999999999 6788 99999999999999999999
Q ss_pred EEEc-CCeEEEEEE
Q 021698 273 VKYY-EETEFFIKW 285 (309)
Q Consensus 273 ~~n~-~d~~~~i~~ 285 (309)
++|. ++..+.++|
T Consensus 182 ~~n~~~~~~~~~l~ 195 (198)
T 2bnm_A 182 FTAAKGTGSAKLIA 195 (198)
T ss_dssp EEESTTSCCEEEEE
T ss_pred EEecCCCCCeEEEE
Confidence 9999 776655444
No 17
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.42 E-value=1.3e-12 Score=105.34 Aligned_cols=90 Identities=26% Similarity=0.319 Sum_probs=72.7
Q ss_pred CCCCceeecCCceEEEeeeCCC-eEEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcE
Q 021698 193 RELNPVEMIPGGSMKIIRESPT-SAIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVH 271 (309)
Q Consensus 193 ~~~~~~~~~pgg~~~il~~~~~-~~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H 271 (309)
.+.+.....+|...+++..... ...++++||...++|+|+..|++||++|++++ .++++.+.|++||++++|+|++|
T Consensus 20 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~--~~~~~~~~l~~Gd~~~ip~~~~H 97 (126)
T 4e2g_A 20 TEVRSFSPLPGFAMQAIQGKNLMLNWVRIEPNTEMPAHEHPHEQAGVMLEGTLEL--TIGEETRVLRPGMAYTIPGGVRH 97 (126)
T ss_dssp GGSCCBCSSTTEEEEEEECSSCEEEEEEECTTCEEEEECCSSEEEEEEEEECEEE--EETTEEEEECTTEEEEECTTCCE
T ss_pred ccceecccCCCeEEEEEeCCCeEEEEEEECCCCcCCCccCCCceEEEEEEeEEEE--EECCEEEEeCCCCEEEECCCCcE
Confidence 3333344455777777654443 36789999999999999999999999999999 78999999999999999999999
Q ss_pred EEEEcCC-eEEEEE
Q 021698 272 RVKYYEE-TEFFIK 284 (309)
Q Consensus 272 ~~~n~~d-~~~~i~ 284 (309)
++.|.++ ..++.+
T Consensus 98 ~~~~~~~~~~~l~v 111 (126)
T 4e2g_A 98 RARTFEDGCLVLDI 111 (126)
T ss_dssp EEECCTTCEEEEEE
T ss_pred EeEECCCCEEEEEE
Confidence 9999987 444433
No 18
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.37 E-value=1.3e-11 Score=107.00 Aligned_cols=129 Identities=11% Similarity=-0.043 Sum_probs=91.5
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhhHHHHhHhhhhccccccccCC-CCCCCCCCCCccceeeeeecCCCCceeecCCceEE
Q 021698 129 EILDTWLKTPFKAPCPASGLKPWDEKLSCFFDKSMTEMPLIGKN-DKLDSDSSGSTCSICCLVKNRELNPVEMIPGGSMK 207 (309)
Q Consensus 129 ~i~~~~l~~~f~~~~~~~~~~~~l~~I~~~l~~s~~el~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~pgg~~~ 207 (309)
..+..|.+..- .++...+.+|+++|++++.+|+..+.+ ...+ ... ....+..+.
T Consensus 39 ~~is~~e~g~~------~p~~~~l~~ia~~l~v~~~~l~~~~~~~~~~~------------~~~-------~~~~g~~~~ 93 (192)
T 1y9q_A 39 AMLGQIERGES------SPTIATLWKIASGLEASFSAFFANDPQLLSSE------------RSF-------PDDLNMKIH 93 (192)
T ss_dssp HHHHHHHTTCS------CCCHHHHHHHHHHHTCCSGGGGTTSTHHHHHC------------CBC-------TTCTTEEEE
T ss_pred HHHHHHHcCCC------CCCHHHHHHHHHHHCcCHHHHcCCCCCCCccc------------eEE-------eCCCCEEEE
Confidence 34667766532 367778999999999999999976531 0000 000 001122233
Q ss_pred EeeeC---CC--eEEEEEcCCCcCC--ccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeE
Q 021698 208 IIRES---PT--SAIVRFKAGSVEP--AHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETE 280 (309)
Q Consensus 208 il~~~---~~--~~~v~l~pG~~~p--~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~ 280 (309)
.+... .. ...++++||...+ +|+|...|++||++|++++ .++++.+.|++||++++|++++|+++|.++.+
T Consensus 94 ~l~~~~~~~~~~~~~~~~~pg~~~~~~~H~h~~~E~~~Vl~G~~~~--~~~~~~~~l~~GD~i~i~~~~~H~~~n~~~~~ 171 (192)
T 1y9q_A 94 TLFPYAADTGLEIFEITLLDHHQQMSSPHALGVIEYIHVLEGIMKV--FFDEQWHELQQGEHIRFFSDQPHGYAAVTEKA 171 (192)
T ss_dssp EEEEEETTTTEEEEEEEECTTCEEEECCCSTTCEEEEEEEESCEEE--EETTEEEEECTTCEEEEECSSSEEEEESSSCE
T ss_pred EeccCCCCCcEEEEEEEECCCCCccCCCCCCCCEEEEEEEEeEEEE--EECCEEEEeCCCCEEEEcCCCCeEeECCCCCc
Confidence 33211 11 2467889998765 7888889999999999999 78999999999999999999999999998776
Q ss_pred EEEEE
Q 021698 281 FFIKW 285 (309)
Q Consensus 281 ~~i~~ 285 (309)
+ ++|
T Consensus 172 ~-~l~ 175 (192)
T 1y9q_A 172 V-FQN 175 (192)
T ss_dssp E-EEE
T ss_pred E-EEE
Confidence 6 444
No 19
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.34 E-value=1.1e-11 Score=98.28 Aligned_cols=65 Identities=17% Similarity=0.272 Sum_probs=60.1
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~ 282 (309)
..++++||...++|+|+..|++||++|++++ .++++.+.+++||++++|+|++|++.|.++..++
T Consensus 43 ~~~~~~~g~~~~~H~H~~~e~~~vl~G~~~~--~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~ 107 (115)
T 1yhf_A 43 TVFSLDKGQEIGRHSSPGDAMVTILSGLAEI--TIDQETYRVAEGQTIVMPAGIPHALYAVEAFQML 107 (115)
T ss_dssp EEEEECTTCEEEEECCSSEEEEEEEESEEEE--EETTEEEEEETTCEEEECTTSCEEEEESSCEEEE
T ss_pred EEEEECCCCccCCEECCCcEEEEEEeCEEEE--EECCEEEEECCCCEEEECCCCCEEEEECCCceEE
Confidence 5678899999999999999999999999999 6899999999999999999999999999876665
No 20
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.33 E-value=1.9e-11 Score=97.54 Aligned_cols=64 Identities=11% Similarity=0.223 Sum_probs=58.6
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEE-EecCCcEEEECCCCcEEEEEcCCeEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERF-DLTVGDYLFTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~-~L~pGd~i~iP~g~~H~~~n~~d~~~ 281 (309)
..++++||...++|+|+..|++||++|++++ .++++.+ .|++||++++|+|++|+++|.++..+
T Consensus 30 ~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~--~i~~~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~ 94 (117)
T 2b8m_A 30 NHIVLPRGEQMPKHYSNSYVHLIIIKGEMTL--TLEDQEPHNYKEGNIVYVPFNVKMLIQNINSDIL 94 (117)
T ss_dssp EEEEEETTCBCCCEECSSCEEEEEEESEEEE--EETTSCCEEEETTCEEEECTTCEEEEECCSSSEE
T ss_pred EEEEECCCCcCCCEeCCCcEEEEEEeCEEEE--EECCEEEEEeCCCCEEEECCCCcEEeEcCCCCCE
Confidence 4678899999999999999999999999999 6789999 99999999999999999999987644
No 21
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.32 E-value=3.4e-12 Score=104.89 Aligned_cols=64 Identities=22% Similarity=0.438 Sum_probs=58.9
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEE--eCCeEEEecCCcEEEECCCCcEEEEEcCCeEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNL--TKGERFDLTVGDYLFTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~--~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~ 281 (309)
..++++||+..++|+|+..|++||++|++++ . ++++.+.+++||++++|+|++|+++|.++..+
T Consensus 42 ~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~--~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~ 107 (145)
T 3ht1_A 42 TEFEVSPNGSTPPHFHEWEHEIYVLEGSMGL--VLPDQGRTEEVGPGEAIFIPRGEPHGFVTGPGQTC 107 (145)
T ss_dssp EEEEEEEEEECCCEECSSCEEEEEEEECEEE--EEGGGTEEEEECTTCEEEECTTCCBEEECCTTCCE
T ss_pred EEEEECCCCcCCCccCCCceEEEEEEeEEEE--EEeECCEEEEECCCCEEEECCCCeEEeEcCCCCCE
Confidence 4678899999999999999999999999999 7 89999999999999999999999999886543
No 22
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=99.32 E-value=3.5e-12 Score=107.11 Aligned_cols=102 Identities=23% Similarity=0.281 Sum_probs=82.8
Q ss_pred cCCCCceee-----cCCceEEEeeeCCC----eEEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeE--EEecCC
Q 021698 192 NRELNPVEM-----IPGGSMKIIRESPT----SAIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGER--FDLTVG 260 (309)
Q Consensus 192 ~~~~~~~~~-----~pgg~~~il~~~~~----~~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~--~~L~pG 260 (309)
..+.+..+. .+|...++|..++. ..+++++||+..|.|+|+..|++|||+|+++. ..++.. +.+++|
T Consensus 14 ~~~~~W~~~p~~~~~~Gv~~~~L~~~~~~g~~~~~~~~~pG~~~p~H~H~~~ee~~VL~G~~~~--~~g~~~~~~~~~~G 91 (145)
T 2o1q_A 14 MDQVDWKPFPAAFSTGGIRWKLLHVSPEMGSWTAIFDCPAGSSFAAHVHVGPGEYFLTKGKMDV--RGGKAAGGDTAIAP 91 (145)
T ss_dssp GGGSCCEECCGGGEESCCEEEEEEEETTTTEEEEEEEECTTEEECCEEESSCEEEEEEEEEEEE--TTCGGGTSEEEESS
T ss_pred cccCccEeCCcccCCCCcEEEEeeECCCcccEEEEEEECCCCCCCccCCCCCEEEEEEEeEEEE--cCCCEecceEeCCC
Confidence 334455555 57888888865543 46899999999999999999999999999998 555555 899999
Q ss_pred cEEEECCCCcEE-EEEcCCeEEEEEEcCCcccccchh
Q 021698 261 DYLFTPAGDVHR-VKYYEETEFFIKWDGRWDMFFDED 296 (309)
Q Consensus 261 d~i~iP~g~~H~-~~n~~d~~~~i~~~g~~~i~~~~~ 296 (309)
|++++|+|..|. ..+.+++.+++++.+++ .|++++
T Consensus 92 d~~~~p~g~~H~p~~~~e~~~~l~~~~gp~-~f~~~~ 127 (145)
T 2o1q_A 92 GYGYESANARHDKTEFPVASEFYMSFLGPL-TFVKPD 127 (145)
T ss_dssp EEEEECTTCEESCCEEEEEEEEEEEEESCE-EEECTT
T ss_pred EEEEECcCCccCCeECCCCeEEEEEECCcc-eecCCC
Confidence 999999999999 66677888888999988 466654
No 23
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.32 E-value=1.1e-11 Score=99.79 Aligned_cols=65 Identities=20% Similarity=0.290 Sum_probs=57.7
Q ss_pred EEEEEcCCCcCCccccCc-cEEEEEEeCEEEEEEEe-CCeEEEecCCcEEEECCCCcEEEEEcCCeEEE
Q 021698 216 AIVRFKAGSVEPAHHHTF-GHDLVVLEGKKSVWNLT-KGERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~-~e~vyVl~G~l~v~~~~-~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~ 282 (309)
.+++++||...++|+|+. .|++||++|++++ .+ +++.+.|++||++++|+|++|++.|.++..+.
T Consensus 42 ~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~--~~~~~~~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~ 108 (125)
T 3h8u_A 42 VVWHAHPGQEIASHVHPHGQDTWTVISGEAEY--HQGNGIVTHLKAGDIAIAKPGQVHGAMNSGPEPFI 108 (125)
T ss_dssp EEEEECTTCEECCC-CTTCEEEEEEEECEEEE--ECSTTCEEEEETTEEEEECTTCCCEEEECSSSCEE
T ss_pred EEEEECCCCcCCcccCCCCeEEEEEEEeEEEE--EECCCeEEEeCCCCEEEECCCCEEEeEeCCCCCEE
Confidence 568899999999999996 6778899999999 67 89999999999999999999999999876544
No 24
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.32 E-value=2.1e-11 Score=104.50 Aligned_cols=65 Identities=15% Similarity=0.202 Sum_probs=59.9
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcC-CeEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYE-ETEFF 282 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~-d~~~~ 282 (309)
..++++||+..++|+|+..|++||++|++++ .++++.+.|++||++|||+|++|+++|.+ +..+.
T Consensus 59 ~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~--~i~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~ 124 (167)
T 3ibm_A 59 RYFEVEPGGYTTLERHEHTHVVMVVRGHAEV--VLDDRVEPLTPLDCVYIAPHAWHQIHATGANEPLG 124 (167)
T ss_dssp EEEEECTTCBCCCBBCSSCEEEEEEESEEEE--EETTEEEEECTTCEEEECTTCCEEEEEESSSCCEE
T ss_pred EEEEECCCCCCCCccCCCcEEEEEEeCEEEE--EECCEEEEECCCCEEEECCCCcEEEEeCCCCCCEE
Confidence 4678999999999999999999999999999 78999999999999999999999999998 65543
No 25
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.30 E-value=2.2e-11 Score=93.65 Aligned_cols=67 Identities=24% Similarity=0.270 Sum_probs=59.2
Q ss_pred EEEEEcCCCcCCccccCc-cEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEEEE
Q 021698 216 AIVRFKAGSVEPAHHHTF-GHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~-~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i~ 284 (309)
..++++||...++|+|+. .|++||++|++++ .++++.+.+++||++++|+|++|++.|.++..+.++
T Consensus 31 ~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~--~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~ 98 (105)
T 1v70_A 31 DLYALLPGQAQKVHVHEGSDKVYYALEGEVVV--RVGEEEALLAPGMAAFAPAGAPHGVRNESASPALLL 98 (105)
T ss_dssp EEEEECTTCEEEEECCSSCEEEEEEEESCEEE--EETTEEEEECTTCEEEECTTSCEEEECCSSSCEEEE
T ss_pred EEEEECCCCcCCccCCCCCcEEEEEEeCEEEE--EECCEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 567899999999999996 6788999999999 689999999999999999999999999886555433
No 26
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.29 E-value=4.8e-11 Score=96.33 Aligned_cols=75 Identities=20% Similarity=0.359 Sum_probs=63.7
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEEEEEcCCcccccch
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWDGRWDMFFDE 295 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i~~~g~~~i~~~~ 295 (309)
...+++||...++|+|...|++||++|++++ .++++.+.+++||++++|+|++|++.|.++..+.++ .+++++
T Consensus 37 ~~~~~~pg~~~~~H~H~~~Ei~~v~~G~~~~--~i~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~-----~i~f~~ 109 (128)
T 4i4a_A 37 AWCIVRPETKSFRHSHNEYELFIVIQGNAII--RINDEDFPVTKGDLIIIPLDSEHHVINNNQEDFHFY-----TIWWDK 109 (128)
T ss_dssp EEEEECTTEECCCBCCSSEEEEEEEESEEEE--EETTEEEEEETTCEEEECTTCCEEEEECSSSCEEEE-----EEEECH
T ss_pred EEEEECCCCccCCEecCCeEEEEEEeCEEEE--EECCEEEEECCCcEEEECCCCcEEeEeCCCCCEEEE-----EEEECH
Confidence 4678899999999999999999999999999 789999999999999999999999999876544322 355555
Q ss_pred hH
Q 021698 296 DL 297 (309)
Q Consensus 296 ~~ 297 (309)
++
T Consensus 110 ~~ 111 (128)
T 4i4a_A 110 ES 111 (128)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 27
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.29 E-value=1.2e-11 Score=96.88 Aligned_cols=66 Identities=20% Similarity=0.305 Sum_probs=58.7
Q ss_pred EEEEEcCCCcCCcc--ccC-ccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEEE
Q 021698 216 AIVRFKAGSVEPAH--HHT-FGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 216 ~~v~l~pG~~~p~H--~H~-~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i 283 (309)
..++++||...++| +|+ ..|++||++|++++ .++++.+.|++||++++|+|++|++.|.++..+.+
T Consensus 24 ~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~--~~~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~ 92 (113)
T 2gu9_A 24 AEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEA--IVDGHTQALQAGSLIAIERGQAHEIRNTGDTPLKT 92 (113)
T ss_dssp EEEEECTTCEEECCCSSSCCCEEEEEEEECCEEE--EETTEEEEECTTEEEEECTTCCEEEECCSSSCEEE
T ss_pred EEEEECCCCccCCcccccCCCcEEEEEEeCEEEE--EECCEEEEeCCCCEEEECCCCcEEeEcCCCCCEEE
Confidence 46788999998888 999 78999999999999 68999999999999999999999999988654433
No 28
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.29 E-value=1.1e-11 Score=105.51 Aligned_cols=65 Identities=17% Similarity=0.257 Sum_probs=59.6
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~ 282 (309)
..++++||+..++|+|+..|++||++|++++ .++++.+.|++||++|+|+|++|+++|.++..+.
T Consensus 47 ~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~v--~v~g~~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~ 111 (156)
T 3kgz_A 47 RYFEVDEGGYSTLERHAHVHAVMIHRGHGQC--LVGETISDVAQGDLVFIPPMTWHQFRANRGDCLG 111 (156)
T ss_dssp EEEEEEEEEECCCBBCSSCEEEEEEEEEEEE--EETTEEEEEETTCEEEECTTCCEEEECCSSSCEE
T ss_pred EEEEECCCCccCceeCCCcEEEEEEeCEEEE--EECCEEEEeCCCCEEEECCCCcEEeEeCCCCCEE
Confidence 4678899999999999999999999999999 7899999999999999999999999999875543
No 29
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.27 E-value=2e-11 Score=110.31 Aligned_cols=85 Identities=13% Similarity=0.026 Sum_probs=69.8
Q ss_pred eecCCceEEEeeeCCC-eEEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEE-ECCCCcEEEEEc
Q 021698 199 EMIPGGSMKIIRESPT-SAIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLF-TPAGDVHRVKYY 276 (309)
Q Consensus 199 ~~~pgg~~~il~~~~~-~~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~-iP~g~~H~~~n~ 276 (309)
...+|...+++..... ..+++++||...++|+|+..|++||++|++++ .++++.+.|+|||++| +|+|++|+++|.
T Consensus 19 ~~~~Gv~~~~l~~~~~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~--~~~~~~~~l~~Gd~i~~ip~~~~H~~~n~ 96 (243)
T 3h7j_A 19 EWENGVRQYSTVRGDTEVLMSYVPPHTNVEPHQHKEVQIGMVVSGELMM--TVGDVTRKMTALESAYIAPPHVPHGARND 96 (243)
T ss_dssp ECTTSCEEEEEEETTEEEEEEEECTTEEEEEECCSSEEEEEEEESEEEE--EETTEEEEEETTTCEEEECTTCCEEEEEC
T ss_pred ccCCCeEEEEEECCCCEEEEEEECCCCccCCEECCCcEEEEEEEeEEEE--EECCEEEEECCCCEEEEcCCCCcEeeEeC
Confidence 3445666666544433 25667999999999999999999999999999 6899999999999998 999999999999
Q ss_pred CCeEEEEEE
Q 021698 277 EETEFFIKW 285 (309)
Q Consensus 277 ~d~~~~i~~ 285 (309)
++..+++++
T Consensus 97 ~~~~~~~l~ 105 (243)
T 3h7j_A 97 TDQEVIAID 105 (243)
T ss_dssp SSSCEEEEE
T ss_pred CCCcEEEEE
Confidence 986655443
No 30
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.27 E-value=1.3e-11 Score=106.00 Aligned_cols=65 Identities=12% Similarity=0.198 Sum_probs=59.7
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~ 282 (309)
.+++++||+..++|+|+..|++||++|++++ .++++.+.|++||++++|+|++|++.|.++..+.
T Consensus 56 ~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~--~v~g~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~ 120 (166)
T 3jzv_A 56 RYFEVGPGGHSTLERHQHAHGVMILKGRGHA--MVGRAVSAVAPYDLVTIPGWSWHQFRAPADEALG 120 (166)
T ss_dssp EEEEEEEEEECCCBBCSSCEEEEEEEECEEE--EETTEEEEECTTCEEEECTTCCEEEECCTTSCEE
T ss_pred EEEEECCCCccCceeCCCcEEEEEEeCEEEE--EECCEEEEeCCCCEEEECCCCcEEeEeCCCCCEE
Confidence 4678899999999999999999999999999 7899999999999999999999999998876543
No 31
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.27 E-value=2.4e-11 Score=96.41 Aligned_cols=65 Identities=17% Similarity=0.287 Sum_probs=58.6
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~ 282 (309)
.++.+++|...+.|+|+..|++||++|++++ .++++.+.|++||++++|+|++|+++|.++..++
T Consensus 41 ~~~~~~~g~~~~~H~h~~~e~~~vl~G~~~~--~i~~~~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~ 105 (114)
T 2ozj_A 41 SLFSFADGESVSEEEYFGDTLYLILQGEAVI--TFDDQKIDLVPEDVLMVPAHKIHAIAGKGRFKML 105 (114)
T ss_dssp EEEEEETTSSCCCBCCSSCEEEEEEEEEEEE--EETTEEEEECTTCEEEECTTCCBEEEEEEEEEEE
T ss_pred EEEEECCCCccccEECCCCeEEEEEeCEEEE--EECCEEEEecCCCEEEECCCCcEEEEeCCCcEEE
Confidence 4567889999999999999999999999999 7899999999999999999999999998665554
No 32
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.25 E-value=5.6e-11 Score=100.60 Aligned_cols=89 Identities=18% Similarity=0.268 Sum_probs=68.5
Q ss_pred ecCCCCceee-cCCceEEEeeeC-----CC--eEEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCC---------e
Q 021698 191 KNRELNPVEM-IPGGSMKIIRES-----PT--SAIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKG---------E 253 (309)
Q Consensus 191 ~~~~~~~~~~-~pgg~~~il~~~-----~~--~~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~---------~ 253 (309)
+.++.++... .+|...+.+... .. ...++++||...++|+|+..|++||++|++++ .+++ +
T Consensus 11 ~~~~~~~~~~~~~G~~~~~l~~~~~~g~~~~~~~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~--~~~~~~~~~~~~~~ 88 (163)
T 1lr5_A 11 DISQMPQSSYGIEGLSHITVAGALNHGMKEVEVWLQTISPGQRTPIHRHSCEEVFTVLKGKGTL--LMGSSSLKYPGQPQ 88 (163)
T ss_dssp EGGGSCCBCTTCTTEEEEEEECHHHHCCSSEEEEEEEECTTCBCCEEEESSCEEEEEEECCEEE--EECCSSSSSCCSCE
T ss_pred ChHHCChhhccCCCcceEEEeccccCCCCcEEEEEEEECCCCcCCCeECCCCeEEEEEeCEEEE--EECCccccccCccE
Confidence 4444444443 455555544221 11 24678999999999999999999999999999 6777 8
Q ss_pred EEEecCCcEEEECCCCcEEEEEcC-CeEE
Q 021698 254 RFDLTVGDYLFTPAGDVHRVKYYE-ETEF 281 (309)
Q Consensus 254 ~~~L~pGd~i~iP~g~~H~~~n~~-d~~~ 281 (309)
.+.|++||++++|+|++|+++|.+ +..+
T Consensus 89 ~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~ 117 (163)
T 1lr5_A 89 EIPFFQNTTFSIPVNDPHQVWNSDEHEDL 117 (163)
T ss_dssp EEEECTTEEEEECTTCCEEEECCCSSSCE
T ss_pred EEEeCCCCEEEECCCCcEEeEeCCCCCCE
Confidence 999999999999999999999988 5443
No 33
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.25 E-value=8.7e-11 Score=91.78 Aligned_cols=68 Identities=26% Similarity=0.430 Sum_probs=59.8
Q ss_pred EEEEEcCCCcCCccccCc-cEE-EEEEeCEEEEEEEeC-CeEEEecCCcEEEECCCCcEEEEEcCCeEEEEEE
Q 021698 216 AIVRFKAGSVEPAHHHTF-GHD-LVVLEGKKSVWNLTK-GERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~-~e~-vyVl~G~l~v~~~~~-~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i~~ 285 (309)
..+++++|...++|+|+. .|+ +||++|++++ .++ ++.+.|++||++++|+|++|++.|.++..++++.
T Consensus 36 ~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~--~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l~~~ 106 (110)
T 2q30_A 36 VSFTFKAGQELPVHSHNIEGELNIVVLEGEGEF--VGDGDAVIPAPRGAVLVAPISTPHGVRAVTDMKVLVTI 106 (110)
T ss_dssp EEEEECTTCEEEEECCSSSCEEEEEEEESCEEE--ECGGGCEEEECTTEEEEEETTSCEEEEESSSEEEEEEE
T ss_pred EEEEECCCCcCCcccCCCCccEEEEEEeCEEEE--EeCCCEEEEECCCCEEEeCCCCcEEEEEcCCcEEEEEE
Confidence 567889999999999996 687 7999999999 677 6999999999999999999999999887765443
No 34
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=99.23 E-value=3.2e-11 Score=102.35 Aligned_cols=106 Identities=25% Similarity=0.320 Sum_probs=87.0
Q ss_pred eeeecCCCCceee-----cCCceEEEeeeCCC----eEEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCC--eEEE
Q 021698 188 CLVKNRELNPVEM-----IPGGSMKIIRESPT----SAIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKG--ERFD 256 (309)
Q Consensus 188 ~l~~~~~~~~~~~-----~pgg~~~il~~~~~----~~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~--~~~~ 256 (309)
.+++..+...++. .+|..+++|+.++. ..+++++||+..+.|+|+..+++|||+|++.. ..++ ..+.
T Consensus 12 ~~v~~d~~~W~p~P~~l~~~Gv~~k~L~~~~e~g~~t~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~--~~Gd~~~~~~ 89 (153)
T 3bal_A 12 EYVKISDNNYVPFPEAFSDGGITWQLLHSSPETSSWTAIFNCPAGSSFASHIHAGPGEYFLTKGKMEV--RGGEQEGGST 89 (153)
T ss_dssp EEEECCGGGCEECCGGGEESCCEEEEEEEETTTTEEEEEEEECTTEEECCEEESSCEEEEEEESEEEE--TTCGGGTSEE
T ss_pred eEEccccCceecCCCccCCCCeEEEEEEECCccceEEEEEEeCCCCCccCccCCCCEEEEEEEEEEEe--cCccccCccc
Confidence 3667777788777 67889999887765 37899999999999999999999999999988 4433 3588
Q ss_pred ecCCcEEEECCCCcEEE-EEcCCeEEEEEEcCCcccccchh
Q 021698 257 LTVGDYLFTPAGDVHRV-KYYEETEFFIKWDGRWDMFFDED 296 (309)
Q Consensus 257 L~pGd~i~iP~g~~H~~-~n~~d~~~~i~~~g~~~i~~~~~ 296 (309)
+.+|++++.|+|..|.. ...++++++++..|++ .|++++
T Consensus 90 ~~aGsYv~ePpGs~H~p~~~~~~~~~~~~~~Gp~-~y~d~~ 129 (153)
T 3bal_A 90 AYAPSYGFESSGALHGKTFFPVESQFYMTFLGPL-NFIDDN 129 (153)
T ss_dssp EESSEEEEECTTCEESCCEESSCEEEEEEEESCE-EEECTT
T ss_pred cCCCeEEEcCCCCcccceeCCCCeEEEEEEECCe-EEECCC
Confidence 89999999999999984 4456778888888886 677754
No 35
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=99.22 E-value=3.5e-11 Score=102.78 Aligned_cols=103 Identities=17% Similarity=0.194 Sum_probs=81.3
Q ss_pred eeecCCCCcee---ecCCceEEEeeeCC----CeEEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCc
Q 021698 189 LVKNRELNPVE---MIPGGSMKIIRESP----TSAIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGD 261 (309)
Q Consensus 189 l~~~~~~~~~~---~~pgg~~~il~~~~----~~~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd 261 (309)
++...+..+.+ ..+|..++.|..++ ...+++++||+..|.|+|+..|++|||+|++++ . +..+.+++||
T Consensus 11 ~v~~~~~~W~~~~~~~~Gv~~~~L~~d~~~g~~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~--~--e~~~~~~~Gd 86 (159)
T 3ebr_A 11 CLDGNDTPWMPFAPYSNDVMVKYFKIDPVRGETITLLKAPAGMEMPRHHHTGTVIVYTVQGSWRY--K--EHDWVAHAGS 86 (159)
T ss_dssp CCCGGGSCCEECTTTCSSSEEEEEEEETTTTEEEEEEEECSSCBCCCEEESSCEEEEEEESCEEE--T--TSSCCBCTTC
T ss_pred EEcCCcCCcEeCCCCCCCEEEEEeeEcCCCCeEEEEEEECCCCCcccccCCCCEEEEEEEeEEEE--e--CCCeEECCCe
Confidence 34555566666 46788888875442 247899999999999999999999999999987 2 2336899999
Q ss_pred EEEECCCCcEEEEEc----CCeEEEEEEcCCcccccchh
Q 021698 262 YLFTPAGDVHRVKYY----EETEFFIKWDGRWDMFFDED 296 (309)
Q Consensus 262 ~i~iP~g~~H~~~n~----~d~~~~i~~~g~~~i~~~~~ 296 (309)
+++.|+|..|...+. +++.+++++.|++. |++++
T Consensus 87 ~~~~P~g~~H~~~~~~~~~e~~~~~~~~~G~l~-~~~~~ 124 (159)
T 3ebr_A 87 VVYETASTRHTPQSAYAEGPDIITFNIVAGELL-YLDDK 124 (159)
T ss_dssp EEEECSSEEECEEESSSSSSCEEEEEEEESCEE-EECTT
T ss_pred EEEECCCCcceeEeCCCCCCCEEEEEEecCccE-ecCCC
Confidence 999999999999998 45777888899874 66544
No 36
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.22 E-value=5.1e-11 Score=100.67 Aligned_cols=68 Identities=16% Similarity=0.306 Sum_probs=59.5
Q ss_pred EEEEEcCCCc-CCcccc-CccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCC-CcEEEEEcCCeEEEEEE
Q 021698 216 AIVRFKAGSV-EPAHHH-TFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAG-DVHRVKYYEETEFFIKW 285 (309)
Q Consensus 216 ~~v~l~pG~~-~p~H~H-~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g-~~H~~~n~~d~~~~i~~ 285 (309)
..++++||.. .++|+| ...|++||++|++++ .++++.+.|++||++++|+| ++|++.|.++..+.+++
T Consensus 49 ~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~--~~~~~~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l~ 119 (162)
T 3l2h_A 49 HLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTL--TMENDQYPIAPGDFVGFPCHAAAHSISNDGTETLVCLV 119 (162)
T ss_dssp EEEEECTTCBSSSSBEESSCCEEEEEEESCEEE--EETTEEEEECTTCEEEECTTSCCEEEECCSSSCEEEEE
T ss_pred EEEEECCCCcCCCCccCCCCCEEEEEEEEEEEE--EECCEEEEeCCCCEEEECCCCceEEeEeCCCCCEEEEE
Confidence 4688999994 899999 678999999999999 78999999999999999998 99999998876554433
No 37
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.21 E-value=3.1e-11 Score=104.46 Aligned_cols=68 Identities=19% Similarity=0.242 Sum_probs=60.5
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeC-CeEEEecCCcEEEECCCCcEEEEEcCCeEEEEEEc
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTK-GERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWD 286 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~-~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i~~~ 286 (309)
.+++++||+..++|.|..+|++|||+|++++ .++ ++++.|++||++ +|++++|+++|.+++.+.++|.
T Consensus 82 ~~v~l~PG~~~~~H~H~~eE~~~VLeGel~l--~ld~ge~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V 150 (172)
T 3es1_A 82 RVVDMLPGKESPMHRTNSIDYGIVLEGEIEL--ELDDGAKRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFI 150 (172)
T ss_dssp EEEEECTTCBCCCBCCSEEEEEEEEESCEEE--ECGGGCEEEECTTCEE-EECSCCBEEECCSSSCEEEEEE
T ss_pred EEEEECCCCCCCCeecCceEEEEEEeCEEEE--EECCCeEEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEE
Confidence 4678999999999999999999999999999 677 789999999999 9999999999999776655443
No 38
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.20 E-value=4.8e-11 Score=97.99 Aligned_cols=68 Identities=22% Similarity=0.292 Sum_probs=60.8
Q ss_pred EEEEEcCCCcCCccccC-ccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEEEEE
Q 021698 216 AIVRFKAGSVEPAHHHT-FGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~-~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i~~ 285 (309)
..++++||...++|+|+ ..|++||++|++++ .++++.+.|++||++++|++++|++.|.++..+.++|
T Consensus 60 ~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~--~i~~~~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l~ 128 (133)
T 1o4t_A 60 ARMKLPPGSSVGLHKHEGEFEIYYILLGEGVF--HDNGKDVPIKAGDVCFTDSGESHSIENTGNTDLEFLA 128 (133)
T ss_dssp EEEEECTTCEEEEEECCSEEEEEEEEESEEEE--EETTEEEEEETTEEEEECTTCEEEEECCSSSCEEEEE
T ss_pred EEEEECCCCccCceECCCccEEEEEEeCEEEE--EECCEEEEeCCCcEEEECCCCcEEeEECCCCCEEEEE
Confidence 45789999999999998 58999999999999 7899999999999999999999999999876665544
No 39
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.20 E-value=1.1e-10 Score=105.51 Aligned_cols=65 Identities=17% Similarity=0.238 Sum_probs=59.1
Q ss_pred EEEEEcC-CCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEE
Q 021698 216 AIVRFKA-GSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 216 ~~v~l~p-G~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~ 282 (309)
.+++++| |...++|+|+.+|++||++|++++ .++++++.|++||++|+|++++|+++|.++..+.
T Consensus 148 ~~~~~~p~g~~~~~H~H~~~e~~~Vl~G~~~~--~i~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~ 213 (243)
T 3h7j_A 148 MLAKIPGNGGEMPFHKHRNEQIGICIGGGYDM--TVEGCTVEMKFGTAYFCEPREDHGAINRSEKESK 213 (243)
T ss_dssp EEEEECTTTEEEEEECCSSEEEEEECSSCEEE--EETTEEEEECTTCEEEECTTCCEEEEECSSSCEE
T ss_pred EEEEECCCCCcCCCEeCCCcEEEEEEECEEEE--EECCEEEEECCCCEEEECCCCcEEeEeCCCCCEE
Confidence 4678999 888899999999999999999999 7899999999999999999999999999865443
No 40
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.19 E-value=4.5e-11 Score=97.11 Aligned_cols=66 Identities=23% Similarity=0.456 Sum_probs=59.5
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i 283 (309)
..++++||...++|+|+..|++||++|++++ .++++.+.+++||++++|+|++|++.|.++..+.+
T Consensus 51 ~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~--~i~~~~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~ 116 (126)
T 1vj2_A 51 RLFTVEPGGLIDRHSHPWEHEIFVLKGKLTV--LKEQGEETVEEGFYIFVEPNEIHGFRNDTDSEVEF 116 (126)
T ss_dssp EEEEEEEEEEEEEECCSSCEEEEEEESEEEE--ECSSCEEEEETTEEEEECTTCCEEEECCSSSCEEE
T ss_pred EEEEECCCCcCCceeCCCcEEEEEEEeEEEE--EECCEEEEECCCCEEEECCCCcEEeEeCCCCCEEE
Confidence 5678899998999999999999999999999 78999999999999999999999999988655443
No 41
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.19 E-value=6.5e-11 Score=101.85 Aligned_cols=69 Identities=14% Similarity=0.099 Sum_probs=61.0
Q ss_pred EEEEEcC-CCcC-CccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEEEEEc
Q 021698 216 AIVRFKA-GSVE-PAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWD 286 (309)
Q Consensus 216 ~~v~l~p-G~~~-p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i~~~ 286 (309)
.+++++| |+.. +.|.|..++++|||+|++++ .++++.+.|.+||++|+|++.+|+++|.++.++.++|.
T Consensus 91 ~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~v--tl~g~~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~V 161 (166)
T 2vpv_A 91 GILKLPAISGQKKLSNSFRTYITFHVIQGIVEV--TVCKNKFLSVKGSTFQIPAFNEYAIANRGNDEAKMFFV 161 (166)
T ss_dssp EEEEECSSGGGCEEEECCSEEEEEEEEESEEEE--EETTEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred EEEEECCCCCCCCCccCCCceEEEEEEEeEEEE--EECCEEEEEcCCCEEEECCCCCEEEEECCCCCEEEEEE
Confidence 5789999 7654 45677888899999999999 78999999999999999999999999999988877775
No 42
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.19 E-value=5.4e-11 Score=97.04 Aligned_cols=77 Identities=21% Similarity=0.186 Sum_probs=57.1
Q ss_pred EEEE--cCCCcCCccccCc-cEEEEEEeCEEEEEEEeCC-eEEEecCCcEEEECCCCcEEEEEcCC-eEEE-EEEcCCcc
Q 021698 217 IVRF--KAGSVEPAHHHTF-GHDLVVLEGKKSVWNLTKG-ERFDLTVGDYLFTPAGDVHRVKYYEE-TEFF-IKWDGRWD 290 (309)
Q Consensus 217 ~v~l--~pG~~~p~H~H~~-~e~vyVl~G~l~v~~~~~~-~~~~L~pGd~i~iP~g~~H~~~n~~d-~~~~-i~~~g~~~ 290 (309)
++++ +||...++|+|+. .|++||++|++++ .+++ +.+.|++||++++|+|++|++.|.++ ..++ +.....+.
T Consensus 45 ~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~--~~~~~~~~~l~~Gd~~~ip~g~~H~~~~~~~~~~~l~~~~p~~~~ 122 (134)
T 2o8q_A 45 VIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEF--EYEDIGAVMLEAGGSAFQPPGVRHRELRHSDDLEVLEIVSPAGFA 122 (134)
T ss_dssp EEEECC-----CCCEEECCSCEEEEEEESEEEE--EETTTEEEEEETTCEEECCTTCCEEEEEECTTCEEEEEESSTTCC
T ss_pred EEEEecCCCCCCCCEECCCCcEEEEEEeCEEEE--EECCcEEEEecCCCEEEECCCCcEEeEeCCCCeEEEEEECCCchh
Confidence 4444 4788889999998 8999999999999 6788 99999999999999999999999764 3444 34444455
Q ss_pred cccch
Q 021698 291 MFFDE 295 (309)
Q Consensus 291 i~~~~ 295 (309)
-++.+
T Consensus 123 ~~~~~ 127 (134)
T 2o8q_A 123 TSVVD 127 (134)
T ss_dssp EEECC
T ss_pred eeehh
Confidence 44433
No 43
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.17 E-value=9.5e-11 Score=97.85 Aligned_cols=64 Identities=19% Similarity=0.205 Sum_probs=56.9
Q ss_pred EEEEEcCCCcCCccccCc-cEEEEEEeCEEEEEEEeCCeE------EEecCCcEEEECCCCcEEEEEcCCeEE
Q 021698 216 AIVRFKAGSVEPAHHHTF-GHDLVVLEGKKSVWNLTKGER------FDLTVGDYLFTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~-~e~vyVl~G~l~v~~~~~~~~------~~L~pGd~i~iP~g~~H~~~n~~d~~~ 281 (309)
..++++||...++|+|+. .|++||++|++++ .++++. +.|++||++++|+|++|+++|.++..+
T Consensus 46 ~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~--~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~ 116 (148)
T 2oa2_A 46 TLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLV--QMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPL 116 (148)
T ss_dssp EEEEECTTCBCCCBCCTTCEEEEEEEESEEEE--EEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCE
T ss_pred EEEEECCCCccCceECCCCcEEEEEEeCEEEE--EECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCE
Confidence 467899999999999985 4889999999999 677887 999999999999999999999986544
No 44
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.17 E-value=1.1e-10 Score=99.60 Aligned_cols=66 Identities=21% Similarity=0.286 Sum_probs=58.9
Q ss_pred EEEEEcCCCcC-CccccCc-cEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCC--CcEEEEEcCCeEEEE
Q 021698 216 AIVRFKAGSVE-PAHHHTF-GHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAG--DVHRVKYYEETEFFI 283 (309)
Q Consensus 216 ~~v~l~pG~~~-p~H~H~~-~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g--~~H~~~n~~d~~~~i 283 (309)
.+++++||+.. ++|+|+. +|++||++|++++ .++++.+.|++||++++|+| ++|+++|.++..+.+
T Consensus 46 ~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~--~~~~~~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~ 115 (163)
T 3i7d_A 46 NLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVL--VDDQGEHPMVPGDCAAFPAGDPNGHQFVNRTDAPATF 115 (163)
T ss_dssp EEEEECTTCBSSSSEEESSCCEEEEEEESCEEE--EETTEEEEECTTCEEEECTTCCCCBEEECCSSSCEEE
T ss_pred EEEEECCCCcCCCCccCCCCcEEEEEEECEEEE--EECCEEEEeCCCCEEEECCCCCcceEEEECCCCCEEE
Confidence 57889999976 7999998 5999999999999 78999999999999999999 999999988765443
No 45
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=99.16 E-value=2.6e-10 Score=97.11 Aligned_cols=97 Identities=15% Similarity=0.124 Sum_probs=76.9
Q ss_pred eeeecCCCCceeecCCceEEEeeeCCC--eEEEEEcCCCcCCccccCc-cEEEEEEe--CEEEEEEEeCCeEEEecCCcE
Q 021698 188 CLVKNRELNPVEMIPGGSMKIIRESPT--SAIVRFKAGSVEPAHHHTF-GHDLVVLE--GKKSVWNLTKGERFDLTVGDY 262 (309)
Q Consensus 188 ~l~~~~~~~~~~~~pgg~~~il~~~~~--~~~v~l~pG~~~p~H~H~~-~e~vyVl~--G~l~v~~~~~~~~~~L~pGd~ 262 (309)
.++.-.+.++.+..+|...+++..... ..+..+.++...++|+|+. .|++|||+ |++++ .++++.+.|++||+
T Consensus 18 ~iv~~~ei~~~~~~~G~srR~l~~~~~fp~sv~~v~~g~~~~~H~H~~~~E~~yVLe~~G~g~v--~idge~~~l~~GD~ 95 (157)
T 4h7l_A 18 QMISLSEIEAVACPCGWAQRAFGHDAGTSVSVHYTQITKAARTHYHREHQEIYVVLDHAAHATI--ELNGQSYPLTKLLA 95 (157)
T ss_dssp EEEETTTSCCEEETTEEEEEESCGGGCCSCEEEEEEECSCCCCBBCSSCEEEEEEEEECTTCEE--EETTEEEECCTTEE
T ss_pred eEEEhhhCCCccCCCCeeeEEeEcCCCCcEEEEEEeCCCCccceECCCCcEEEEEEecCcEEEE--EECCEEEEeCCCCE
Confidence 577778888888888888887765543 2344456677788999975 58889999 99999 68999999999999
Q ss_pred EEECCCCcEEEEEcCCeEEEEEEcCC
Q 021698 263 LFTPAGDVHRVKYYEETEFFIKWDGR 288 (309)
Q Consensus 263 i~iP~g~~H~~~n~~d~~~~i~~~g~ 288 (309)
++||+|+.|++. ++..++.+..++
T Consensus 96 v~IPpg~~H~i~--g~l~~L~I~~Pp 119 (157)
T 4h7l_A 96 ISIPPLVRHRIV--GEATIINIVSPP 119 (157)
T ss_dssp EEECTTCCEEEE--SCEEEEEEEESS
T ss_pred EEECCCCeEeeE--CCEEEEEEECCC
Confidence 999999999997 466666655554
No 46
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.15 E-value=2.8e-10 Score=101.91 Aligned_cols=71 Identities=8% Similarity=0.104 Sum_probs=64.6
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEEEEEcCC
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWDGR 288 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i~~~g~ 288 (309)
.++.+.+|...+.|.|+.++++||++|++++ .++++++.|++||++++|+|++|++++.++..++.++...
T Consensus 40 ~~~~~~~G~~~~~h~h~~~~~~~Vl~G~~~~--~i~~~~~~l~~Gd~~~~p~~~~H~~~a~~~~~~l~i~~~~ 110 (227)
T 3rns_A 40 SLFSLAKDEEITAEAMLGNRYYYCFNGNGEI--FIENNKKTISNGDFLEITANHNYSIEARDNLKLIEIGEKI 110 (227)
T ss_dssp EEEEECTTCEEEECSCSSCEEEEEEESEEEE--EESSCEEEEETTEEEEECSSCCEEEEESSSEEEEEEEECC
T ss_pred EEEEECCCCccCccccCCCEEEEEEeCEEEE--EECCEEEEECCCCEEEECCCCCEEEEECCCcEEEEEEeec
Confidence 6789999999999999999999999999999 7899999999999999999999999999888776554443
No 47
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.14 E-value=2.4e-10 Score=92.20 Aligned_cols=63 Identities=24% Similarity=0.462 Sum_probs=56.5
Q ss_pred EEEEEcCCCcCC-ccccCccEEEE-EEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeE
Q 021698 216 AIVRFKAGSVEP-AHHHTFGHDLV-VLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETE 280 (309)
Q Consensus 216 ~~v~l~pG~~~p-~H~H~~~e~vy-Vl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~ 280 (309)
.+++++||...+ +|+|+..+++| |++|++++ .++++.+.+++||++++|+|++|++.|.++..
T Consensus 29 ~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~--~i~~~~~~l~~Gd~i~i~~~~~H~~~~~~~~~ 93 (125)
T 3cew_A 29 SINHLPAGAGVPFVHSHKQNEEIYGILSGKGFI--TIDGEKIELQAGDWLRIAPDGKRQISAASDSP 93 (125)
T ss_dssp EEEEECTTCBCSSEEEESSEEEEEEEEEEEEEE--EETTEEEEEETTEEEEECTTCCEEEEEBTTBC
T ss_pred EEEEECCCCCCCCCccCCCceEEEEEEeCEEEE--EECCEEEEeCCCCEEEECCCCcEEEEcCCCCC
Confidence 567889999888 89999887766 99999999 78999999999999999999999999987543
No 48
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=99.14 E-value=1.6e-10 Score=99.26 Aligned_cols=103 Identities=21% Similarity=0.261 Sum_probs=77.2
Q ss_pred eecCCCCceeec---CCceEEEeeeCCC----eEEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcE
Q 021698 190 VKNRELNPVEMI---PGGSMKIIRESPT----SAIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDY 262 (309)
Q Consensus 190 ~~~~~~~~~~~~---pgg~~~il~~~~~----~~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~ 262 (309)
+...+.++.... +|..++.|..++. ..+++++||+..|.|+|+..|++|||+|+++. . ++..+.+++||+
T Consensus 13 v~~~~~~W~~~~~~~~GV~~~~L~~~~~~g~~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~f~~--~-~~~~~~~~aGd~ 89 (165)
T 3cjx_A 13 VDTTAHPFLKALGGHEGTDIFPLFMDPYNGLMVMRASFAPGLTLPLHFHTGTVHMYTISGCWYY--T-EYPGQKQTAGCY 89 (165)
T ss_dssp EETTSSCCBCSGGGCTTEEEEEEEEETTTTEEEEEEEECTTCBCCEEEESSCEEEEEEESEEEE--T-TCTTSCEETTEE
T ss_pred EccccCCcEECCCCCCCEEEEEeEeCCCCCcEEEEEEECCCCcCCcccCCCCEEEEEEEEEEEE--C-CCceEEECCCeE
Confidence 344555555543 3777777754432 47899999999999999999999999999987 2 322578899999
Q ss_pred EEECCCCcEEEEEcC----CeEEEEEEcCCcccccchh
Q 021698 263 LFTPAGDVHRVKYYE----ETEFFIKWDGRWDMFFDED 296 (309)
Q Consensus 263 i~iP~g~~H~~~n~~----d~~~~i~~~g~~~i~~~~~ 296 (309)
++.|+|..|...+.. ++.++++..|++. |++++
T Consensus 90 ~~~P~g~~H~~~a~~~~~~gci~l~v~~GpL~-~~~~~ 126 (165)
T 3cjx_A 90 LYEPGGSIHQFNTPRDNEGQTEVIFMLSGCNV-NFTQD 126 (165)
T ss_dssp EEECTTCEECEECCTTCSSCEEEEEEEESCEE-EECTT
T ss_pred EEeCCCCceeeEeCCCCCCCcEEEEEEeccce-ecCCC
Confidence 999999999999876 4546666677754 45543
No 49
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.13 E-value=1.8e-10 Score=96.42 Aligned_cols=65 Identities=28% Similarity=0.280 Sum_probs=59.0
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeE-EEecCCcEEEECCCCcEEEEEcCCeEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGER-FDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~-~~L~pGd~i~iP~g~~H~~~n~~d~~~~ 282 (309)
..++++||...++|+|+..|++||++|++++ .++++. +.|++||++++|++++|++.|.++..+.
T Consensus 51 ~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~--~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~ 116 (147)
T 2f4p_A 51 YDVVFEPGARTHWHSHPGGQILIVTRGKGFY--QERGKPARILKKGDVVEIPPNVVHWHGAAPDEELV 116 (147)
T ss_dssp EEEEECTTCEECSEECTTCEEEEEEEEEEEE--EETTSCCEEEETTCEEEECTTCCEEEEEBTTBCEE
T ss_pred EEEEECCCCccCceECCCceEEEEEeCEEEE--EECCEEEEEECCCCEEEECCCCcEEeEeCCCCCEE
Confidence 4678999999999999999999999999999 678887 9999999999999999999999866543
No 50
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.13 E-value=2.4e-10 Score=102.27 Aligned_cols=67 Identities=22% Similarity=0.298 Sum_probs=61.6
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEE-cCCeEEEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKY-YEETEFFIK 284 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n-~~d~~~~i~ 284 (309)
.+++++||...++|+|+..+++||++|++++ .++++++.+++||++|+|+|++|+++| .++..++++
T Consensus 156 ~~~~~~~G~~~~~H~H~~~e~~~Vl~G~~~~--~i~g~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~ll~ 223 (227)
T 3rns_A 156 TIMSFWKGESLDPHKAPGDALVTVLDGEGKY--YVDGKPFIVKKGESAVLPANIPHAVEAETENFKMLLI 223 (227)
T ss_dssp EEEEECTTCEEEEECCSSEEEEEEEEEEEEE--EETTEEEEEETTEEEEECTTSCEEEECCSSCEEEEEE
T ss_pred EEEEECCCCccCCEECCCcEEEEEEeEEEEE--EECCEEEEECCCCEEEECCCCcEEEEeCCCCEEEEEE
Confidence 5788999999999999999999999999999 789999999999999999999999999 887776644
No 51
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.11 E-value=1.1e-10 Score=91.56 Aligned_cols=62 Identities=18% Similarity=0.210 Sum_probs=51.2
Q ss_pred EEEEcCCCcCCccccCc-cEEEEEEeCEEEEEEEeCC-eEEEecCCcEEEECCCCcEEEEEcCCeEE
Q 021698 217 IVRFKAGSVEPAHHHTF-GHDLVVLEGKKSVWNLTKG-ERFDLTVGDYLFTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~-~e~vyVl~G~l~v~~~~~~-~~~~L~pGd~i~iP~g~~H~~~n~~d~~~ 281 (309)
.+.+.+|. .++|+|+. .|++||++|++++ .+++ +.+.|++||++++|+|++|++.|.++..+
T Consensus 32 ~~~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~--~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~ 95 (107)
T 2i45_A 32 HLVKLLGD-YGWHTHGYSDKVLFAVEGDMAV--DFADGGSMTIREGEMAVVPKSVSHRPRSENGCSL 95 (107)
T ss_dssp EEEEEEEE-CCCBCC--CCEEEEESSSCEEE--EETTSCEEEECTTEEEEECTTCCEEEEEEEEEEE
T ss_pred EEEECCCC-CcceeCCCCCEEEEEEeCEEEE--EECCCcEEEECCCCEEEECCCCcEeeEeCCCeEE
Confidence 45566775 46999998 8999999999999 6788 99999999999999999999999654443
No 52
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.11 E-value=2.8e-10 Score=92.36 Aligned_cols=59 Identities=25% Similarity=0.437 Sum_probs=53.8
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcC
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYE 277 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~ 277 (309)
.+++++||...++|. +.+|++|||+|++++ .++++++.|++||+++||+|++|++.|.+
T Consensus 43 ~~~~~~pG~~~~~H~-~~~E~~~Vl~G~~~~--~~~g~~~~l~~GD~v~ip~g~~H~~~~~~ 101 (119)
T 3lwc_A 43 GYGRYAPGQSLTETM-AVDDVMIVLEGRLSV--STDGETVTAGPGEIVYMPKGETVTIRSHE 101 (119)
T ss_dssp EEEEECTTCEEEEEC-SSEEEEEEEEEEEEE--EETTEEEEECTTCEEEECTTCEEEEEEEE
T ss_pred EEEEECCCCCcCccC-CCCEEEEEEeCEEEE--EECCEEEEECCCCEEEECCCCEEEEEcCC
Confidence 578999999887775 788999999999999 67999999999999999999999999975
No 53
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.10 E-value=4e-10 Score=102.20 Aligned_cols=67 Identities=19% Similarity=0.220 Sum_probs=60.7
Q ss_pred EEEEEcCCCcCCc-cccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEEEE
Q 021698 216 AIVRFKAGSVEPA-HHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 216 ~~v~l~pG~~~p~-H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i~ 284 (309)
.+++++||+..+. |+|..+|.+|||+|++++ .++++++.|++||++|++++.+|+++|.+++++.++
T Consensus 168 ~~~tl~PG~~~~~~~~h~~ee~~~vLeG~~~~--~~~~~~~~l~~GD~~~~~~~~pH~~~n~g~~~~~yl 235 (246)
T 1sfn_A 168 STMSFAPGASLPYAEVHYMEHGLLMLEGEGLY--KLEENYYPVTAGDIIWMGAHCPQWYGALGRNWSKYL 235 (246)
T ss_dssp EEEEECTTCBCSSCBCCSSCEEEEEEECEEEE--EETTEEEEEETTCEEEECTTCCEEEEEESSSCEEEE
T ss_pred EEEEECCCCccCcccCCCceEEEEEEECEEEE--EECCEEEEcCCCCEEEECCCCCEEEEcCCCCCEEEE
Confidence 6789999999986 778899999999999999 789999999999999999999999999998766543
No 54
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.08 E-value=1e-09 Score=100.95 Aligned_cols=64 Identities=19% Similarity=0.293 Sum_probs=59.0
Q ss_pred EEEEEcCCCcCCc-cccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCC-eEE
Q 021698 216 AIVRFKAGSVEPA-HHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEE-TEF 281 (309)
Q Consensus 216 ~~v~l~pG~~~p~-H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d-~~~ 281 (309)
..++++||...+. |+|...|++||++|++++ .++++.+.|++||++++|++++|+++|.++ ..+
T Consensus 185 ~~~~l~pg~~~~~~H~H~~~E~~yVl~G~~~~--~i~~~~~~l~~GD~i~i~~~~~H~~~n~~~~~~~ 250 (274)
T 1sef_A 185 HILSFEPGASHAYIETHVQEHGAYLISGQGMY--NLDNEWYPVEKGDYIFMSAYVPQAAYAVGREEPL 250 (274)
T ss_dssp EEEEECTTCBCSSCBCCSCCEEEEEEECEEEE--EETTEEEEEETTCEEEECTTCCEEEEEECSSSCE
T ss_pred EEEEECCCCccCcceeccCeEEEEEEeCEEEE--EECCEEEEECCCCEEEECCCCCEEEEeCCCCCCE
Confidence 5678999999988 999999999999999999 789999999999999999999999999987 544
No 55
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=99.07 E-value=1.5e-10 Score=90.72 Aligned_cols=76 Identities=18% Similarity=0.232 Sum_probs=58.9
Q ss_pred EEeeeCCCe--EEEEEcCCCcCCccccCccEE-EEEEeCEEEEEEEeCC---eEEEecCCcEEEECCCCcEEEEEcCCeE
Q 021698 207 KIIRESPTS--AIVRFKAGSVEPAHHHTFGHD-LVVLEGKKSVWNLTKG---ERFDLTVGDYLFTPAGDVHRVKYYEETE 280 (309)
Q Consensus 207 ~il~~~~~~--~~v~l~pG~~~p~H~H~~~e~-vyVl~G~l~v~~~~~~---~~~~L~pGd~i~iP~g~~H~~~n~~d~~ 280 (309)
+++-++... ..++++||...++|+|+..++ ++|++|++++ ..++ +...+++||++|+|+|+.|++.|.++.+
T Consensus 9 ~V~ien~~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v--~~~d~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~p 86 (98)
T 3lag_A 9 EIQIDNDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTI--VAPDGTRSLAQLKTGRSYARKAGVQHDVRNESTAE 86 (98)
T ss_dssp EEEEESSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CE--ECTTSCEECCCBCTTCCEEECTTCEEEEBCCSSSC
T ss_pred eEEEcCCeEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEE--EeCCCceEEEEecCCcEEEEcCCCcEECEECCCCe
Confidence 344444432 468899999999999998755 5678999999 5555 3456899999999999999999999888
Q ss_pred EEEE
Q 021698 281 FFIK 284 (309)
Q Consensus 281 ~~i~ 284 (309)
+.++
T Consensus 87 l~~I 90 (98)
T 3lag_A 87 IVFL 90 (98)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7543
No 56
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=99.05 E-value=7.2e-10 Score=85.31 Aligned_cols=57 Identities=21% Similarity=0.317 Sum_probs=51.2
Q ss_pred CcCCccccCc-cEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEE
Q 021698 224 SVEPAHHHTF-GHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 224 ~~~p~H~H~~-~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~ 282 (309)
+..++|+|+. .|++||++|++++ .++++.+.+++||++++|+|++|++.|.++..++
T Consensus 40 ~~~~~H~H~~~~e~~~v~~G~~~~--~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l 97 (102)
T 3d82_A 40 GEFVWHEHADTDEVFIVMEGTLQI--AFRDQNITLQAGEMYVIPKGVEHKPMAKEECKIM 97 (102)
T ss_dssp EECCCBCCTTCCEEEEEEESEEEE--ECSSCEEEEETTEEEEECTTCCBEEEEEEEEEEE
T ss_pred CCCCceeCCCCcEEEEEEeCEEEE--EECCEEEEEcCCCEEEECCCCeEeeEcCCCCEEE
Confidence 4578999998 9999999999999 7899999999999999999999999998655554
No 57
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=99.03 E-value=7.5e-10 Score=97.37 Aligned_cols=67 Identities=24% Similarity=0.275 Sum_probs=56.8
Q ss_pred EEEEEcCCCcCCccccCc-cEEEEEEeCEEEEEEEeC----Ce--EEEecCCcEEEECCCCcEEEEEcCCeEEE
Q 021698 216 AIVRFKAGSVEPAHHHTF-GHDLVVLEGKKSVWNLTK----GE--RFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~-~e~vyVl~G~l~v~~~~~----~~--~~~L~pGd~i~iP~g~~H~~~n~~d~~~~ 282 (309)
..+++.||+..++|+|+. .|++||++|++++++..+ ++ ++.|++||++++|+|.+|+++|.+++.+.
T Consensus 75 ~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~ 148 (201)
T 1fi2_A 75 NRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAY 148 (201)
T ss_dssp EEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEE
T ss_pred EEEEECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEE
Confidence 567899999999999996 699999999999953211 45 89999999999999999999999865443
No 58
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.02 E-value=2.9e-10 Score=89.36 Aligned_cols=66 Identities=21% Similarity=0.301 Sum_probs=54.5
Q ss_pred EEEEEcCCCcCCccccCccEE-EEEEeCEEEEEEEe-CCe--EEEecCCcEEEECCCCcEEEEEcCCeEEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHD-LVVLEGKKSVWNLT-KGE--RFDLTVGDYLFTPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~-vyVl~G~l~v~~~~-~~~--~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i 283 (309)
..++++||...++|+|+.+.+ +++++|++++ .. +++ ...+++||++++|+|++|++.|.+++++.+
T Consensus 20 ~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~--~~~dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~f 89 (98)
T 2ozi_A 20 TEWRLPPGSATGHHTHGMDYVVVPMADGEMTI--VAPDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVF 89 (98)
T ss_dssp EEEEECTTEECCSEECCSCEEEEESSCBC-CE--ECTTSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEE
T ss_pred EEEEECCCCccCcEeCCCCEEEEEEeeEEEEE--EeCCCcEEEEEECCCCEEEECCCCceeCEECCCCCEEE
Confidence 568999999999999998744 3568999998 45 443 479999999999999999999999877654
No 59
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=99.02 E-value=2.9e-10 Score=103.24 Aligned_cols=63 Identities=13% Similarity=0.139 Sum_probs=56.3
Q ss_pred EEEEEcCCCcCCccccC-ccEEEEEEeCEEEEEEEe--------CCe------------EEEecCCcEEEECCCCcEEEE
Q 021698 216 AIVRFKAGSVEPAHHHT-FGHDLVVLEGKKSVWNLT--------KGE------------RFDLTVGDYLFTPAGDVHRVK 274 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~-~~e~vyVl~G~l~v~~~~--------~~~------------~~~L~pGd~i~iP~g~~H~~~ 274 (309)
..++++||...++|+|+ ..|++||++|++++ .+ +++ .+.+.|||++++|+|++|.++
T Consensus 46 ~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~ 123 (239)
T 2xlg_A 46 AHAQIPPGGGPMPHIHYFINEWFWTPEGGIEL--FHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFV 123 (239)
T ss_dssp EEEEECTTCSCCSEEESSEEEEEEETTCCCEE--EEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEE
T ss_pred EEEEECCCCcCCCeECCCccEEEEEEEeEEEE--EEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCCEEEE
Confidence 45688999999999999 56889999999999 56 777 999999999999999999999
Q ss_pred EcCCeE
Q 021698 275 YYEETE 280 (309)
Q Consensus 275 n~~d~~ 280 (309)
|.++.+
T Consensus 124 N~~~~~ 129 (239)
T 2xlg_A 124 NPTDKT 129 (239)
T ss_dssp CCSSSC
T ss_pred eCCCCC
Confidence 998754
No 60
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.02 E-value=6.9e-10 Score=96.01 Aligned_cols=70 Identities=19% Similarity=0.162 Sum_probs=57.3
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe--CCeEEEecCCcEEEECCCCcEEEEEcCCe-EEEEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT--KGERFDLTVGDYLFTPAGDVHRVKYYEET-EFFIKW 285 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~--~~~~~~L~pGd~i~iP~g~~H~~~n~~d~-~~~i~~ 285 (309)
..++++||+..++|+|...|++||++|++++++.. +++++.|++||++++|+|.+|++.|.++. .+.+++
T Consensus 44 ~~~~l~pg~~~~pHh~~a~E~~yVl~G~~~v~v~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~ 116 (178)
T 1dgw_A 44 LEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILK 116 (178)
T ss_dssp EEEEECTTEEEEEEEESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECCSSSCEEEEE
T ss_pred EEEEecCCcEecCcCCCCCEEEEEEeEEEEEEEEeCCCcEEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEE
Confidence 56889999999999445689999999999995211 26789999999999999999999999865 554443
No 61
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.01 E-value=1.4e-09 Score=100.17 Aligned_cols=65 Identities=17% Similarity=0.191 Sum_probs=59.9
Q ss_pred EEEEEcCCCcCCc-cccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEE
Q 021698 216 AIVRFKAGSVEPA-HHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 216 ~~v~l~pG~~~p~-H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~ 282 (309)
.+++++||+.+|. |+|.++|.+|||+|+..+ .++++++.+++||++|++|+++|.+.|.+++.+.
T Consensus 189 ~~~t~~PG~~~p~~e~H~~eh~~~vL~G~g~y--~l~~~~~~V~~GD~i~~~~~~~h~~~n~G~e~~~ 254 (266)
T 4e2q_A 189 HTMDFQPGEFLNVKEVHYNQHGLLLLEGQGIY--RLGDNWYPVQAGDVIWMAPFVPQWYAALGKTRSR 254 (266)
T ss_dssp EEEEECTTCBCSSCCCCSCCEEEEEEECEEEE--EETTEEEEEETTCEEEECTTCCEEEEEESSSCEE
T ss_pred EEEEECCCcCcCCceEcccceEEEEEeceEEE--EECCEEEEecCCCEEEECCCCcEEEEeCCCCCEE
Confidence 5789999999996 889999999999999999 7899999999999999999999999999876653
No 62
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=99.01 E-value=7e-10 Score=98.82 Aligned_cols=70 Identities=19% Similarity=0.257 Sum_probs=61.7
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeC-CeEEEecCCcEEEECCCCcEEEEEcCCeEE--EEEEcCC
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTK-GERFDLTVGDYLFTPAGDVHRVKYYEETEF--FIKWDGR 288 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~-~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~--~i~~~g~ 288 (309)
.++.+.||...|+|.|+.+|+.|||+|++++ .++ ++++.++|||++++|+|++|.+++ +++++ +++|.|.
T Consensus 135 G~v~l~PG~~yP~HsHp~EEiy~VLsG~~e~--~v~~g~~~~l~pGd~v~ipsgv~Ha~rt-~dePllalwvW~G~ 207 (217)
T 4b29_A 135 TVGYWGPGLDYGWHEHLPEELYSVVSGRALF--HLRNAPDLMLEPGQTRFHPANAPHAMTT-LTDPILTLVLWRGA 207 (217)
T ss_dssp EEEEECSSCEEEEEECSSEEEEEEEEECEEE--EETTSCCEEECTTCEEEECTTCCEEEEC-CSSCEEEEEEEEST
T ss_pred EEEEECCCCcCCCCCCCCceEEEEEeCCEEE--EECCCCEEecCCCCEEEcCCCCceeEEE-CCccEEEEEEEeCC
Confidence 5788999999999999999999999999999 456 899999999999999999999985 65665 6777774
No 63
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.00 E-value=6.4e-10 Score=102.79 Aligned_cols=68 Identities=24% Similarity=0.391 Sum_probs=59.1
Q ss_pred EEEEEcCCCcC--CccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEEEEE
Q 021698 216 AIVRFKAGSVE--PAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 216 ~~v~l~pG~~~--p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i~~ 285 (309)
.+++++||+.. +.|.|..+|++||++|++++ .++++++.|++||++++|++++|+++|.++..+.++|
T Consensus 71 ~~~~l~PG~~~~~~~h~H~~eE~~~Vl~G~l~v--~v~g~~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l~ 140 (278)
T 1sq4_A 71 YIVELAPNGGSDKPEQDPNAEAVLFVVEGELSL--TLQGQVHAMQPGGYAFIPPGADYKVRNTTGQHTRFHW 140 (278)
T ss_dssp EEEEEEEEEEESSCCCCTTEEEEEEEEESCEEE--EESSCEEEECTTEEEEECTTCCEEEECCSSSCEEEEE
T ss_pred EEEEECCCCccCCCCcCCCceEEEEEEeCEEEE--EECCEEEEECCCCEEEECCCCcEEEEECCCCCEEEEE
Confidence 56889999876 56889988999999999999 6899999999999999999999999999876554433
No 64
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.99 E-value=8.3e-10 Score=101.63 Aligned_cols=65 Identities=18% Similarity=0.264 Sum_probs=58.0
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeC-CeEEEecCCcEEEECCCCcEEEEEcCCeEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTK-GERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~-~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~ 282 (309)
.+++++||+..+.|.|..+|++||++|++++ .++ ++++.|++||++|+|++.+|+++|.++..++
T Consensus 73 ~lv~l~PGg~s~~~~h~~EEfiyVleG~l~l--~l~~g~~~~L~~Gds~y~p~~~~H~~~N~~~Ar~l 138 (266)
T 4e2q_A 73 YLAKMKEMSSSGLPPQDIERLIFVVEGAVTL--TNTSSSSKKLTVDSYAYLPPNFHHSLDCVESATLV 138 (266)
T ss_dssp EEEEECSSEECCCCCTTEEEEEEEEEECEEE--EC--CCCEEECTTEEEEECTTCCCEEEESSCEEEE
T ss_pred EEEEECcCCcCCCCCCCCeEEEEEEEEEEEE--EECCCcEEEEcCCCEEEECCCCCEEEEeCCCEEEE
Confidence 6789999999888999999999999999999 678 8999999999999999999999997655444
No 65
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.98 E-value=1.4e-09 Score=101.54 Aligned_cols=87 Identities=24% Similarity=0.355 Sum_probs=69.3
Q ss_pred eeecCCCCceeecCCceEEEeeeC----CC--eEEEEEcCCCcCCccccC-ccEEEEEEeCEEEEEEEeCCeEEEecCCc
Q 021698 189 LVKNRELNPVEMIPGGSMKIIRES----PT--SAIVRFKAGSVEPAHHHT-FGHDLVVLEGKKSVWNLTKGERFDLTVGD 261 (309)
Q Consensus 189 l~~~~~~~~~~~~pgg~~~il~~~----~~--~~~v~l~pG~~~p~H~H~-~~e~vyVl~G~l~v~~~~~~~~~~L~pGd 261 (309)
+++..+...+. ..|..++++... .. ...+++.||...++|+|+ ..|++||++|++++ .++++.+.|++||
T Consensus 17 v~r~~~~~~~~-~~g~~~~~l~~~~~~~~~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~--~~~~~~~~l~~Gd 93 (337)
T 1y3t_A 17 LLRSGEGERYL-FGRQVATVMANGRSTGDLFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLEL--TLDGERYLLISGD 93 (337)
T ss_dssp EECTTCSEEEE-ETTEEEEEEECHHHHTSSEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEE--EETTEEEEECTTC
T ss_pred EecCCCccEEE-ECCeEEEEEeecCCCCCeEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEE--EECCEEEEECCCC
Confidence 45665554433 355566665421 12 256789999999999999 88999999999999 6799999999999
Q ss_pred EEEECCCCcEEEEEcCC
Q 021698 262 YLFTPAGDVHRVKYYEE 278 (309)
Q Consensus 262 ~i~iP~g~~H~~~n~~d 278 (309)
++++|+|++|+++|.++
T Consensus 94 ~~~~p~~~~H~~~n~~~ 110 (337)
T 1y3t_A 94 YANIPAGTPHSYRMQSH 110 (337)
T ss_dssp EEEECTTCCEEEEECST
T ss_pred EEEECCCCcEEEEECCC
Confidence 99999999999999986
No 66
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=98.98 E-value=1.2e-09 Score=95.33 Aligned_cols=65 Identities=23% Similarity=0.357 Sum_probs=55.8
Q ss_pred EEEEEcCCCc------CCccccCc---cEEEEEEeCEEEEEEEeCCeE-----EEecCCcEEEECCCCcEEEEEcCCeEE
Q 021698 216 AIVRFKAGSV------EPAHHHTF---GHDLVVLEGKKSVWNLTKGER-----FDLTVGDYLFTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 216 ~~v~l~pG~~------~p~H~H~~---~e~vyVl~G~l~v~~~~~~~~-----~~L~pGd~i~iP~g~~H~~~n~~d~~~ 281 (309)
.+++++||.. .++|+|+. .|++||++|++.+ .++++. +.|++||++++|+|++|++.|.++..+
T Consensus 70 ~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~--~i~~~~g~~~~~~l~~GD~v~ip~g~~H~~~N~g~~~~ 147 (190)
T 1x82_A 70 ATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGM--LLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGDEPF 147 (190)
T ss_dssp EEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEE--EEECTTCCEEEEEECTTCEEEECTTCEEEEEECSSSCE
T ss_pred EEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEE--EEcCcCCcEEEEEECCCcEEEECCCCeEEEEECCcccE
Confidence 4568999988 77899974 6999999999999 566665 999999999999999999999986554
Q ss_pred E
Q 021698 282 F 282 (309)
Q Consensus 282 ~ 282 (309)
.
T Consensus 148 ~ 148 (190)
T 1x82_A 148 I 148 (190)
T ss_dssp E
T ss_pred E
Confidence 3
No 67
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=98.98 E-value=3.7e-09 Score=84.39 Aligned_cols=57 Identities=23% Similarity=0.383 Sum_probs=49.1
Q ss_pred cCCCcCCc---cccCccEEEEEEeCEEEEEEEeCCeE--EEecCCcEEEECCCCcEEEEEcCCe
Q 021698 221 KAGSVEPA---HHHTFGHDLVVLEGKKSVWNLTKGER--FDLTVGDYLFTPAGDVHRVKYYEET 279 (309)
Q Consensus 221 ~pG~~~p~---H~H~~~e~vyVl~G~l~v~~~~~~~~--~~L~pGd~i~iP~g~~H~~~n~~d~ 279 (309)
.+|...+. |+|+..|++||++|++++ .++++. +.|++||+++||++++|++.|.++.
T Consensus 38 ~~g~~~~~~~~~~~~~~E~~~Vl~G~~~l--~~~~~~~~~~l~~Gd~i~ipa~~~H~~~n~~~~ 99 (112)
T 2opk_A 38 SNGQASPPGFWYDSPQDEWVMVVSGSAGI--ECEGDTAPRVMRPGDWLHVPAHCRHRVAWTDGG 99 (112)
T ss_dssp ESSCCCCTTCCBCCSSEEEEEEEESCEEE--EETTCSSCEEECTTEEEEECTTCCEEEEEECSS
T ss_pred eCCccCCCCccccCCccEEEEEEeCeEEE--EECCEEEEEEECCCCEEEECCCCcEEEEeCCCC
Confidence 45554433 778889999999999999 678888 9999999999999999999999854
No 68
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=98.97 E-value=1.1e-09 Score=99.86 Aligned_cols=69 Identities=19% Similarity=0.285 Sum_probs=57.4
Q ss_pred EEEEEcCCCcCCcccc--CccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEEEEEc
Q 021698 216 AIVRFKAGSVEPAHHH--TFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWD 286 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H--~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i~~~ 286 (309)
.+++++||+..+.|.| ..+|++||++|++++ .++++++.|++||++++|++++|+++|.++..+.++|.
T Consensus 62 ~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~--~~~~~~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~v 132 (261)
T 1rc6_A 62 YLVTLHQNGGNQQGFGGEGIETFLYVISGNITA--KAEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLY 132 (261)
T ss_dssp EEEEEEEEEEESSCSCCTTEEEEEEEEESEEEE--EETTEEEEEETTEEEEECTTCCCEEEECSSSCEEEEEE
T ss_pred EEEEEcCCCccCCCCCCCCceEEEEEEEeEEEE--EECCEEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEE
Confidence 5688999987765443 356789999999999 68999999999999999999999999998766554443
No 69
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=98.96 E-value=1.5e-09 Score=98.96 Aligned_cols=65 Identities=18% Similarity=0.221 Sum_probs=56.6
Q ss_pred EEEEEcCCCcCCccccC-ccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCC-eEEE
Q 021698 216 AIVRFKAGSVEPAHHHT-FGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEE-TEFF 282 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~-~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d-~~~~ 282 (309)
.+++++||+..+.|+|. ..|++||++|++++ .++++++.|++||++++|++++|+++|.++ ..+.
T Consensus 182 ~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~--~i~~~~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~ 248 (261)
T 1rc6_A 182 HILSFAPGASHGYIETHVQEHGAYILSGQGVY--NLDNNWIPVKKGDYIFMGAYSLQAGYGVGRGEAFS 248 (261)
T ss_dssp EEEEECTTCCBEEEEEESSCEEEEEEESEEEE--ESSSCEEEEETTCEEEECSSEEEEEEEC----CEE
T ss_pred EEEEECCCCccCcccCCCceEEEEEEEeEEEE--EECCEEEEeCCCCEEEECCCCcEEeEeCCCCcCEE
Confidence 57889999999999996 67899999999999 789999999999999999999999999987 5543
No 70
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.96 E-value=1.9e-09 Score=85.08 Aligned_cols=62 Identities=24% Similarity=0.248 Sum_probs=53.1
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeC-CeEEEecCCcEEEECCCCcEEEEEcCCeEEE
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTK-GERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~-~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~ 282 (309)
..+..||.. ++| |+..|++||++|++++ .++ ++.+.|++||++++|+|++|+++|.++...+
T Consensus 35 ~~~~~pg~~-~~h-H~~~E~~~Vl~G~~~~--~i~~g~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~ 97 (101)
T 1o5u_A 35 IWEKEVSEF-DWY-YDTNETCYILEGKVEV--TTEDGKKYVIEKGDLVTFPKGLRCRWKVLEPVRKH 97 (101)
T ss_dssp EEEECSEEE-EEE-CSSCEEEEEEEEEEEE--EETTCCEEEEETTCEEEECTTCEEEEEEEEEEEEE
T ss_pred EEEeCCCcc-ccc-CCceEEEEEEeCEEEE--EECCCCEEEECCCCEEEECCCCcEEEEeCCCeeEE
Confidence 456777653 456 8899999999999999 677 8999999999999999999999998876554
No 71
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.90 E-value=3.4e-09 Score=97.89 Aligned_cols=64 Identities=28% Similarity=0.394 Sum_probs=58.3
Q ss_pred EEEEEcCCCcCCc-cccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEE
Q 021698 216 AIVRFKAGSVEPA-HHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 216 ~~v~l~pG~~~p~-H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~ 281 (309)
.+++++||+.++. |+|..+|.+|||+|++.+ .++++++.|++||++|++++.+|++.|.+++.+
T Consensus 194 ~~~~l~pG~~i~~~~~h~~e~~~~il~G~~~~--~~~~~~~~v~~GD~~~~~~~~~h~~~n~g~~~~ 258 (278)
T 1sq4_A 194 NIVNFEPGGVIPFAETHVMEHGLYVLEGKAVY--RLNQDWVEVEAGDFMWLRAFCPQACYSGGPGRF 258 (278)
T ss_dssp EEEEECSSSEESCCCCCSEEEEEEEEECEEEE--EETTEEEEEETTCEEEEEESCCEEEECCSSSCE
T ss_pred EEEEECCCCCcCCCCCCCccEEEEEEeCEEEE--EECCEEEEeCCCCEEEECCCCCEEEEcCCCCCE
Confidence 5789999999997 677888889999999999 789999999999999999999999999987654
No 72
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=98.90 E-value=2.4e-09 Score=98.39 Aligned_cols=69 Identities=14% Similarity=0.160 Sum_probs=57.3
Q ss_pred EEEEEcCCCcCCcccc--CccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEEEEEc
Q 021698 216 AIVRFKAGSVEPAHHH--TFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWD 286 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H--~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i~~~ 286 (309)
.+++++||+....|.| ..+|++||++|++++ .++++++.|++||++++|++++|+++|.++..+.++|.
T Consensus 65 ~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~--~~~~~~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l~v 135 (274)
T 1sef_A 65 YIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRV--SDGQETHELEAGGYAYFTPEMKMYLANAQEADTEVFLY 135 (274)
T ss_dssp EEEEEEEEEEECSCSSBTTEEEEEEEEESEEEE--ECSSCEEEEETTEEEEECTTSCCEEEESSSSCEEEEEE
T ss_pred EEEEECCCCcCCCCCCCCCceEEEEEEEeEEEE--EECCEEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEE
Confidence 5688999987654433 456789999999999 68999999999999999999999999998766554443
No 73
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.90 E-value=4e-09 Score=100.97 Aligned_cols=65 Identities=20% Similarity=0.288 Sum_probs=58.2
Q ss_pred EEEEEcCCCcCCccccCc-cEEEEEEeCEEEEEEEeC-----CeEEEecCCcEEEECCCCcEEEEEcCCeEEE
Q 021698 216 AIVRFKAGSVEPAHHHTF-GHDLVVLEGKKSVWNLTK-----GERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~-~e~vyVl~G~l~v~~~~~-----~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~ 282 (309)
..++++||+..++|+|+. .|++||++|++++ .++ ++++.|++||++++|++.+|++.|.++..+.
T Consensus 260 ~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~--~i~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~ 330 (385)
T 1j58_A 260 ALVTVEPGAMRELHWHPNTHEWQYYISGKARM--TVFASDGHARTFNYQAGDVGYVPFAMGHYVENIGDEPLV 330 (385)
T ss_dssp EEEEECTTCEEEEEECSSSCEEEEEEESEEEE--EEEEETTEEEEEEEESSCEEEECTTCBEEEEECSSSCEE
T ss_pred EEEEECCCcccCceeCCCCCEEEEEEeCeEEE--EEEcCCCcEEEEEEcCCCEEEECCCCeEEEEECCCCCEE
Confidence 678899999999999998 8999999999999 455 6889999999999999999999999865543
No 74
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.89 E-value=6.7e-09 Score=91.27 Aligned_cols=87 Identities=16% Similarity=0.093 Sum_probs=68.1
Q ss_pred CCCceeecCCceEEEeeeCCC--eEEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcE
Q 021698 194 ELNPVEMIPGGSMKIIRESPT--SAIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVH 271 (309)
Q Consensus 194 ~~~~~~~~pgg~~~il~~~~~--~~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H 271 (309)
+..+....+|...+.+..+.. ..+++++||+..|.|+|+..|++|||+|+++ ++...+++||++++|+|..|
T Consensus 104 ~~~W~~~~~Gv~~~~L~~~~~~~v~l~~~~pG~~~p~H~H~g~E~~~VL~G~f~------de~~~~~~Gd~~~~p~g~~H 177 (195)
T 2q1z_B 104 DVRWRTLGGGVRQAILPTGGEAIARLLWIPGGQAVPDHGHRGLELTLVLQGAFR------DETDRFGAGDIEIADQELEH 177 (195)
T ss_dssp CSCCEECSSSCEEEEECCSSSSEEEEEEECTTCBCCCCCCSSCEEEEEEESEEE------CSSSEEETTCEEEECSSCCC
T ss_pred ccCceecCCCeEEEEEecCCCcEEEEEEECCCCCCCCcCCCCeEEEEEEEEEEE------CCcEEECCCeEEEeCcCCcc
Confidence 345555667888887754432 4789999999999999999999999999854 24457889999999999999
Q ss_pred EEEEc--CCeEEEEEEc
Q 021698 272 RVKYY--EETEFFIKWD 286 (309)
Q Consensus 272 ~~~n~--~d~~~~i~~~ 286 (309)
..++. +++.++++.+
T Consensus 178 ~p~a~~~~gc~~l~~~d 194 (195)
T 2q1z_B 178 TPVAERGLDCICLAATD 194 (195)
T ss_dssp CCEECSSSCEEEEEEEC
T ss_pred CCEeCCCCCEEEEEEec
Confidence 99994 4566655543
No 75
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=98.89 E-value=4.2e-09 Score=87.10 Aligned_cols=63 Identities=22% Similarity=0.349 Sum_probs=51.6
Q ss_pred eEEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEE
Q 021698 215 SAIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 215 ~~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~ 281 (309)
..+++++|| ..++| |..+|++|||+|++++ .++++.+.|++||++++|+|.+|++.+.++..+
T Consensus 59 ~~~~~~~pG-~~~~h-~~~~E~~~VLeG~~~l--~~~g~~~~l~~GD~i~~p~g~~h~~~~~~~~~~ 121 (133)
T 2pyt_A 59 AGFMQWDNA-FFPWT-LNYDEIDMVLEGELHV--RHEGETMIAKAGDVMFIPKGSSIEFGTPTSVRF 121 (133)
T ss_dssp EEEEEEEEE-EEEEE-CSSEEEEEEEEEEEEE--EETTEEEEEETTCEEEECTTCEEEEEEEEEEEE
T ss_pred EEEEEECCC-Ccccc-CCCCEEEEEEECEEEE--EECCEEEEECCCcEEEECCCCEEEEEeCCCEEE
Confidence 367889999 33333 3578899999999999 678999999999999999999999998655443
No 76
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.88 E-value=1.2e-08 Score=95.27 Aligned_cols=87 Identities=21% Similarity=0.316 Sum_probs=65.3
Q ss_pred eeecCCCCceeecCCceEEEeeeCC-----CeEEEEEcC-CCcCCccccC-ccEEEEEEeCEEEEEEEeCCeEEEecCCc
Q 021698 189 LVKNRELNPVEMIPGGSMKIIRESP-----TSAIVRFKA-GSVEPAHHHT-FGHDLVVLEGKKSVWNLTKGERFDLTVGD 261 (309)
Q Consensus 189 l~~~~~~~~~~~~pgg~~~il~~~~-----~~~~v~l~p-G~~~p~H~H~-~~e~vyVl~G~l~v~~~~~~~~~~L~pGd 261 (309)
+++..+..... ..+..++.+.... ....+++.| |...++|+|+ ..|++||++|++++ .++++++.|++||
T Consensus 189 v~r~~~~~~~~-~~g~~~~~l~~~~~~~~~~~~~~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~--~i~~~~~~l~~GD 265 (337)
T 1y3t_A 189 VLESGEGDRLL-TGDQLHRIVAAQKNTDGQFIVVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTM--WTDGQEIQLNPGD 265 (337)
T ss_dssp EECTTCSEEEE-ETTEEEEEEECGGGTTTSCEEEEEEECSCCCCCCEECSSCEEEEEEEESCEEE--EETTEEEEECTTC
T ss_pred EECCCCcCEEE-ECCcEEEEEecccccCCcEEEEEEEcCCCCCCCCcCCCCCcEEEEEEeCEEEE--EECCEEEEECCCC
Confidence 34444444333 2455666664211 134556655 5667899999 68999999999999 6799999999999
Q ss_pred EEEECCCCcEEEEEcCC
Q 021698 262 YLFTPAGDVHRVKYYEE 278 (309)
Q Consensus 262 ~i~iP~g~~H~~~n~~d 278 (309)
++++|++.+|++.|.++
T Consensus 266 ~~~ip~~~~H~~~n~~~ 282 (337)
T 1y3t_A 266 FLHVPANTVHSYRLDSH 282 (337)
T ss_dssp EEEECTTCCEEEEECSS
T ss_pred EEEECCCCeEEEEECCC
Confidence 99999999999999986
No 77
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.87 E-value=5.7e-09 Score=98.83 Aligned_cols=82 Identities=21% Similarity=0.321 Sum_probs=63.6
Q ss_pred cCCceEEEeeeC--CC-----eEEEEEcCCCcCCccccC-ccEEEEEEeCEEEEEEEe-CC--eEEEecCCcEEEECCCC
Q 021698 201 IPGGSMKIIRES--PT-----SAIVRFKAGSVEPAHHHT-FGHDLVVLEGKKSVWNLT-KG--ERFDLTVGDYLFTPAGD 269 (309)
Q Consensus 201 ~pgg~~~il~~~--~~-----~~~v~l~pG~~~p~H~H~-~~e~vyVl~G~l~v~~~~-~~--~~~~L~pGd~i~iP~g~ 269 (309)
..+|..+.+... +. ...++++||+..++|||+ ..|++||++|++++++.. ++ +.+.|++||++++|+|+
T Consensus 33 ~~~G~~~~~~~~~~p~~~~~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~g~ 112 (361)
T 2vqa_A 33 YDGGTTKQVGTYNFPVSKGMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVEIADVDKGGLWYFPRGW 112 (361)
T ss_dssp ETTEEEEEESTTTCTTCCSCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCEEEEEEETTEEEEECTTC
T ss_pred cCCceEEEeChhhCccccceeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEEEEEEcCCCEEEECCCC
Confidence 366666655321 11 257789999988999999 889999999999995221 44 57999999999999999
Q ss_pred cEEEEEcCCeEEE
Q 021698 270 VHRVKYYEETEFF 282 (309)
Q Consensus 270 ~H~~~n~~d~~~~ 282 (309)
+|++.|.++..+.
T Consensus 113 ~H~~~n~~~~~~~ 125 (361)
T 2vqa_A 113 GHSIEGIGPDTAK 125 (361)
T ss_dssp EEEEEECSSSCEE
T ss_pred eEEEEeCCCCCEE
Confidence 9999999854433
No 78
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.87 E-value=5.5e-09 Score=98.97 Aligned_cols=65 Identities=22% Similarity=0.365 Sum_probs=57.6
Q ss_pred EEEEEcCCCcCCccccCc-cEEEEEEeCEEEEEEEe---CCe--EEEecCCcEEEECCCCcEEEEEcCCeEEE
Q 021698 216 AIVRFKAGSVEPAHHHTF-GHDLVVLEGKKSVWNLT---KGE--RFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~-~e~vyVl~G~l~v~~~~---~~~--~~~L~pGd~i~iP~g~~H~~~n~~d~~~~ 282 (309)
..++++||+..++|+|+. .|++||++|++++ .+ +++ ++.|++||++++|+|.+|.+.|.++..+.
T Consensus 237 ~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~--~v~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~ 307 (361)
T 2vqa_A 237 ALIHLEPGAMRQLHWHPNADEWQYVLDGEMDL--TVFASEGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLD 307 (361)
T ss_dssp EEEEECTTCEEEEEECSSCCEEEEEEESCEEE--EEECSTTCEEEEEECTTCEEEECTTCEEEEECCSSSCEE
T ss_pred EEEEECCCcccccccCCCCCEEEEEEeCEEEE--EEEcCCCcEEEEEECCCCEEEECCCCeEEeEECCCCCEE
Confidence 678899999999999998 8999999999999 45 666 89999999999999999999999865443
No 79
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=98.86 E-value=6.2e-09 Score=88.16 Aligned_cols=62 Identities=15% Similarity=0.330 Sum_probs=50.1
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~ 281 (309)
.++++. ++..++| |..+|+.|||+|++++ .++++++.|+|||+++||+|++|++.|.+.+.+
T Consensus 69 g~~~~e-~~~~~~~-~~~eE~~yVLeG~~~l--~i~g~~~~l~~GD~i~iP~G~~h~~~n~~~a~~ 130 (151)
T 4axo_A 69 GMMEMK-ETTFDWT-LNYDEIDYVIDGTLDI--IIDGRKVSASSGELIFIPKGSKIQFSVPDYARF 130 (151)
T ss_dssp EEEEEE-EEEEEEE-CSSEEEEEEEEEEEEE--EETTEEEEEETTCEEEECTTCEEEEEEEEEEEE
T ss_pred EEEEEc-CccccEe-CCCcEEEEEEEeEEEE--EECCEEEEEcCCCEEEECCCCEEEEEeCCCEEE
Confidence 566776 4444433 5677899999999999 679999999999999999999999999844433
No 80
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=98.83 E-value=4.9e-09 Score=100.13 Aligned_cols=66 Identities=24% Similarity=0.379 Sum_probs=59.3
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~ 282 (309)
..++++||...+.|+|...|++||++|+++++ .++++.+.+++||++++|+|++|++.|.++..+.
T Consensus 103 ~~~~l~PG~~~~~H~H~~~e~~yVl~G~g~~t-~v~g~~~~l~~GD~~~iP~g~~H~~~n~~~~~~~ 168 (354)
T 2d40_A 103 GLQLIMPGEVAPSHRHNQSALRFIVEGKGAFT-AVDGERTPMNEGDFILTPQWRWHDHGNPGDEPVI 168 (354)
T ss_dssp EEEEECTTCEEEEEEESSCEEEEEEECSSCEE-EETTEEEECCTTCEEEECTTSCEEEECCSSSCEE
T ss_pred EEEEECCCCCcCCeecCcceEEEEEEEEEEEE-EECCEEEEEcCCCEEEECCCCcEEeEeCCCCCEE
Confidence 57889999999999999999999999998774 4689999999999999999999999999875543
No 81
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=98.80 E-value=1.3e-08 Score=100.03 Aligned_cols=69 Identities=19% Similarity=0.186 Sum_probs=59.3
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCC--eEEEecCCcEEEECCCCcEEEEEcC-CeEEEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKG--ERFDLTVGDYLFTPAGDVHRVKYYE-ETEFFIK 284 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~--~~~~L~pGd~i~iP~g~~H~~~n~~-d~~~~i~ 284 (309)
..++++||+..++|+|...|++||++|++++.+...+ +++.|++||++++|+|++|++.|.+ ++++.++
T Consensus 89 ~~~~l~Pgg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l 160 (445)
T 2cav_A 89 LEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRIL 160 (445)
T ss_dssp EEEEECSSEEEEEEEESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECCSSCCEEEE
T ss_pred EEEEECCCcCccCcCCCCceEEEEEeCEEEEEEEeCCCCEEEEecCCCEEEECCCCcEEEEECCCCCCEEEE
Confidence 5689999999999988889999999999999633233 7899999999999999999999998 6666554
No 82
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.80 E-value=2.1e-08 Score=95.44 Aligned_cols=62 Identities=16% Similarity=0.150 Sum_probs=52.3
Q ss_pred EEEEcCCCc-CC--ccccC-ccEEEEEEeCEEEEEEEeCC-----eEEEecCCcEEEECCCCcEEEEEcCCeE
Q 021698 217 IVRFKAGSV-EP--AHHHT-FGHDLVVLEGKKSVWNLTKG-----ERFDLTVGDYLFTPAGDVHRVKYYEETE 280 (309)
Q Consensus 217 ~v~l~pG~~-~p--~H~H~-~~e~vyVl~G~l~v~~~~~~-----~~~~L~pGd~i~iP~g~~H~~~n~~d~~ 280 (309)
...+.|++. .+ +|+|+ ..|++||++|++++ .+++ +.+.|++||++++|+|++|+++|.++..
T Consensus 51 ~~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~--~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~ 121 (350)
T 1juh_A 51 MGTNAPHSDALGVLPHIHQKHYENFYCNKGSFQL--WAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT 121 (350)
T ss_dssp EEEEECCCSSCSSCCEECSSCEEEEEEEESEEEE--EEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTE
T ss_pred EEEEcCCCCCCCCccccCCCceEEEEEEEEEEEE--EECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCC
Confidence 355566654 45 89998 77889999999999 5677 8999999999999999999999998643
No 83
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.75 E-value=1.9e-08 Score=91.02 Aligned_cols=63 Identities=24% Similarity=0.333 Sum_probs=54.9
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~ 282 (309)
.+++++||+..+.|. .+|++||++|++++ .++++++.|++||++++|++++|+++|.++..++
T Consensus 53 ~~~~l~Pg~~~~~~~--~ee~~~Vl~G~~~~--~~~~~~~~l~~Gd~~~~p~~~~H~~~n~~~~~~l 115 (246)
T 1sfn_A 53 FTAEMPAGAQATESV--YQRFAFVLSGEVDV--AVGGETRTLREYDYVYLPAGEKHMLTAKTDARVS 115 (246)
T ss_dssp EEEEECTTCEEECCS--SEEEEEEEEEEEEE--ECSSCEEEECTTEEEEECTTCCCEEEEEEEEEEE
T ss_pred EEEEECCCCcCCCCc--eeEEEEEEECEEEE--EECCEEEEECCCCEEEECCCCCEEEEeCCCEEEE
Confidence 568899998887775 77889999999999 7899999999999999999999999998444443
No 84
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.74 E-value=3.4e-08 Score=95.62 Aligned_cols=64 Identities=23% Similarity=0.285 Sum_probs=59.1
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcC-CeEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYE-ETEF 281 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~-d~~~ 281 (309)
.+..++||...+.|+|...+++||++|+..+ .++++++.+++||++++|+|.+|.+.|.+ ++.+
T Consensus 297 ~~~~l~PG~~~~~HrH~~~~v~~VleG~G~~--~V~ge~~~~~~GD~~~iP~g~~H~~~N~g~~e~~ 361 (394)
T 3bu7_A 297 SMQMLRPGEHTKAHRHTGNVIYNVAKGQGYS--IVGGKRFDWSEHDIFCVPAWTWHEHCNTQERDDA 361 (394)
T ss_dssp EEEEECTTCBCCCEEESSCEEEEEEECCEEE--EETTEEEEECTTCEEEECTTCCEEEEECCSSCCE
T ss_pred EEEEECCCCcCCCcccCCcEEEEEEeCeEEE--EECCEEEEEeCCCEEEECCCCeEEeEeCCCCCCe
Confidence 6789999999999999999999999999998 78999999999999999999999999987 4543
No 85
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.74 E-value=2.1e-08 Score=81.93 Aligned_cols=63 Identities=16% Similarity=0.278 Sum_probs=52.8
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CCeEEEecCCcEEEECCCCcEEEEEcCCeEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KGERFDLTVGDYLFTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~ 281 (309)
.+.+..||... +|.|...|++|||+|++++ .. +++.+.|++||++++|+|.+|++.|.++..-
T Consensus 52 g~w~~~pG~~~-~~~~~~~E~~~Vl~G~~~l--~~~~g~~~~l~~GD~~~ip~g~~h~~~~~~~~rK 115 (123)
T 3bcw_A 52 GVWESTSGSFQ-SNTTGYIEYCHIIEGEARL--VDPDGTVHAVKAGDAFIMPEGYTGRWEVDRHVKK 115 (123)
T ss_dssp EEEEEEEEEEE-CCCTTEEEEEEEEEEEEEE--ECTTCCEEEEETTCEEEECTTCCCEEEEEEEEEE
T ss_pred EEEEECCCcee-eEcCCCcEEEEEEEEEEEE--EECCCeEEEECCCCEEEECCCCeEEEEECCceeE
Confidence 45677777543 5777668999999999999 56 7889999999999999999999999986543
No 86
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=98.72 E-value=5.1e-08 Score=87.47 Aligned_cols=89 Identities=25% Similarity=0.361 Sum_probs=70.5
Q ss_pred ecCCCCceee-cCCceEEEeeeCC-C----eEEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEE
Q 021698 191 KNRELNPVEM-IPGGSMKIIRESP-T----SAIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLF 264 (309)
Q Consensus 191 ~~~~~~~~~~-~pgg~~~il~~~~-~----~~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~ 264 (309)
...+.++... .+|...+.|..+. . ..+++++||...|.|+|+..|++|||+|+++- + ...+++||+++
T Consensus 15 ~~~~~~W~~~~~~Gv~~~~L~~~~~e~g~~~~lvr~~pG~~~p~H~H~g~Ee~~VL~G~f~d----~--~~~~~~Gd~~~ 88 (223)
T 3o14_A 15 DTDQLEWRPSPMKGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQD----E--HGDYPAGTYVR 88 (223)
T ss_dssp EGGGSCCEECSSTTEEEEEEEEESSSSCEEEEEEEECTTEECCCEECTTCEEEEEEEEEEEE----T--TEEEETTEEEE
T ss_pred eCccCCceeCCCCCEEEEEeecCCCccccEEEEEEECCCCCcccccCCCCEEEEEEEeEEEE----C--CeEECCCeEEE
Confidence 5566666665 5777888775433 2 36899999999999999999999999999764 3 35788999999
Q ss_pred ECCCCcEEEEEcCCeEEEEEE
Q 021698 265 TPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 265 iP~g~~H~~~n~~d~~~~i~~ 285 (309)
.|+|..|......++.++++.
T Consensus 89 ~P~g~~H~p~a~~gc~~~vk~ 109 (223)
T 3o14_A 89 NPPTTSHVPGSAEGCTIFVKL 109 (223)
T ss_dssp ECTTCEECCEESSCEEEEEEE
T ss_pred eCCCCccccEeCCCCEEEEEe
Confidence 999999999886667666654
No 87
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.70 E-value=3.1e-08 Score=94.77 Aligned_cols=63 Identities=27% Similarity=0.379 Sum_probs=55.0
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CCe--EEEecCCcEEEECCCCcEEEEEcCC
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KGE--RFDLTVGDYLFTPAGDVHRVKYYEE 278 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~~--~~~L~pGd~i~iP~g~~H~~~n~~d 278 (309)
..+++.||+..++|||+..|++||++|++++++.. +++ .+.|++||++++|+|++|++.|.++
T Consensus 82 ~~~~l~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~ 147 (385)
T 1j58_A 82 VNMRLKPGAIRELHWHKEAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEE 147 (385)
T ss_dssp EEEEECTTCEEEEEEESSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEEEEE
T ss_pred EEEEECCCCCCCCccCChheEEEEEeeeEEEEEEeCCCcEEEEEeCCCCEEEECCCCeEEEEECCC
Confidence 56889999999999999999999999999994211 456 5699999999999999999999874
No 88
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=98.70 E-value=2.8e-08 Score=96.94 Aligned_cols=66 Identities=20% Similarity=0.248 Sum_probs=56.9
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe--CCeEEEecCCcEEEECCCCcEEEEEcC-CeEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT--KGERFDLTVGDYLFTPAGDVHRVKYYE-ETEF 281 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~--~~~~~~L~pGd~i~iP~g~~H~~~n~~-d~~~ 281 (309)
..++++||+..++|+|...|++||++|++++.+.. +++++.+++||++++|+|.+|++.|.+ ++.+
T Consensus 52 ~~~~l~PGg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e~l 120 (416)
T 1uij_A 52 VQFQSKPNTILLPHHADADFLLFVLSGRAILTLVNNDDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNL 120 (416)
T ss_dssp EEEEECTTEEEEEEEESEEEEEEEEESCEEEEEECSSCEEEEEECTTEEEEECTTCEEEEEECCSSCCE
T ss_pred EEEEeccCcCcccccCCCceEEEEEeeEEEEEEEECCCCeEEEecCCCEEEECCCCeEEEEecCCCCCE
Confidence 57899999999999778889999999999995221 457899999999999999999999994 6654
No 89
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.70 E-value=2.5e-08 Score=95.69 Aligned_cols=66 Identities=23% Similarity=0.310 Sum_probs=60.5
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEE-EEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKS-VWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~-v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i 283 (309)
.+.+++||...+.|.|..+++.||++|+.. + .++++++.+++||++++|+|..|...|.+++.+++
T Consensus 106 ~~~~l~PG~~~~~HrH~~~ev~~VleG~G~~~--~vdG~~~~~~~GD~v~iP~g~~H~~~N~gde~l~~ 172 (368)
T 3nw4_A 106 AIQYLGPRETAPEHRHSQNAFRFVVEGEGVWT--VVNGDPVRMSRGDLLLTPGWCFHGHMNDTDQPMAW 172 (368)
T ss_dssp EEEEECTTCEEEEEEESSCEEEECSSCEEEEE--EETTEEEEEETTCEEEECTTCCEEEEECSSSCEEE
T ss_pred EEEEECCCCccCceecccceEEEEEecceEEE--EECCEEEEEeCCCEEEECCCCcEEeEeCCCCCeEE
Confidence 567899999999999999999999999996 5 68999999999999999999999999999877654
No 90
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=98.69 E-value=5.9e-08 Score=92.57 Aligned_cols=65 Identities=17% Similarity=0.216 Sum_probs=58.9
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~ 282 (309)
.+.+++||...++|+|+..++.||++|+.++ .++++++.+++||.++||++.+|++.|.++..++
T Consensus 271 ~~~~l~pG~~~~~H~h~~~ev~~v~~G~g~~--~v~~~~~~~~~GD~~~vP~~~~H~~~n~e~~~l~ 335 (354)
T 2d40_A 271 FLQLLPKGFASRVARTTDSTIYHVVEGSGQV--IIGNETFSFSAKDIFVVPTWHGVSFQTTQDSVLF 335 (354)
T ss_dssp EEEEECTTCBCCCBEESSCEEEEEEEEEEEE--EETTEEEEEETTCEEEECTTCCEEEEEEEEEEEE
T ss_pred EEEEECCCCCCCceecCCcEEEEEEeCeEEE--EECCEEEEEcCCCEEEECCCCeEEEEeCCCEEEE
Confidence 6789999999999999999999999999999 6799999999999999999999999996544444
No 91
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=98.66 E-value=5.1e-08 Score=95.51 Aligned_cols=67 Identities=19% Similarity=0.197 Sum_probs=57.3
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeC--CeEEEecCCcEEEECCCCcEEEEEcC-CeEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTK--GERFDLTVGDYLFTPAGDVHRVKYYE-ETEFF 282 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~--~~~~~L~pGd~i~iP~g~~H~~~n~~-d~~~~ 282 (309)
..++++||+..++|+|...|++||++|++++.+... ..++.|++||.+++|+|.+|++.|.+ ++.+.
T Consensus 64 ~~~~l~PGg~~~pHh~~a~Ei~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~ 133 (434)
T 2ea7_A 64 VEFKSKPNTLLLPHHADADFLLVVLNGTAVLTLVNPDSRDSYILEQGHAQKIPAGTTFFLVNPDDNENLR 133 (434)
T ss_dssp EEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECTTCEEEEEECCSSCCEE
T ss_pred EEEEecCCcCccCccCCCceEEEEEecEEEEEEEeCCCCEEEEeCCCCEEEECCCccEEEEeCCCCCCeE
Confidence 578999999999997778899999999999953223 47899999999999999999999998 55543
No 92
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=98.64 E-value=1.4e-07 Score=93.41 Aligned_cols=81 Identities=15% Similarity=0.194 Sum_probs=62.1
Q ss_pred ceeecCCceEEEeeeC--C-------CeEEEEEcCCCcCCccccCc-cEEEEEEeCEEEEEEEeC--CeEE--EecCCcE
Q 021698 197 PVEMIPGGSMKIIRES--P-------TSAIVRFKAGSVEPAHHHTF-GHDLVVLEGKKSVWNLTK--GERF--DLTVGDY 262 (309)
Q Consensus 197 ~~~~~pgg~~~il~~~--~-------~~~~v~l~pG~~~p~H~H~~-~e~vyVl~G~l~v~~~~~--~~~~--~L~pGd~ 262 (309)
++....|+.++.+... | ....++++||+..++|||+. .|++||++|++++++... .+.+ .|++||+
T Consensus 313 ~~~~~~gG~v~~~~~~~~P~L~~l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv 392 (476)
T 1fxz_A 313 DIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRV 392 (476)
T ss_dssp SEEETTTEEEEEECTTTSGGGTTTTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCE
T ss_pred CcccCCCeEEEEeccccCcccccCcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCE
Confidence 3445667877766432 1 13678999999999999995 688999999999963221 2444 4999999
Q ss_pred EEECCCCcEEEEEcCC
Q 021698 263 LFTPAGDVHRVKYYEE 278 (309)
Q Consensus 263 i~iP~g~~H~~~n~~d 278 (309)
++||+|.+|...| ++
T Consensus 393 ~viP~G~~H~~~n-g~ 407 (476)
T 1fxz_A 393 LIVPQNFVVAARS-QS 407 (476)
T ss_dssp EEECTTCEEEEEE-CS
T ss_pred EEECCCCeEEEEe-CC
Confidence 9999999999999 53
No 93
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.64 E-value=9e-08 Score=92.64 Aligned_cols=68 Identities=26% Similarity=0.411 Sum_probs=60.8
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEE-cCCeEEEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKY-YEETEFFIK 284 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n-~~d~~~~i~ 284 (309)
.+.+++||...+.|.|...++.||++|+..+. .++++++.+++||++++|+|..|...| .++..+.++
T Consensus 126 ~~~~l~PG~~~~~HrH~~~ev~~IleG~G~~t-~v~G~~~~~~~GD~i~~P~g~~H~~~N~~gde~l~~l 194 (394)
T 3bu7_A 126 GIQTMKAGERAGAHRHAASALRFIMEGSGAYT-IVDGHKVELGANDFVLTPNGTWHEHGILESGTECIWQ 194 (394)
T ss_dssp EEEEECTTCBCCCEEESSCEEEEEEECSCEEE-EETTEEEEECTTCEEEECTTCCEEEEECTTCCCEEEE
T ss_pred EEEEECCCCCcCCccCCcceEEEEEEeeEEEE-EECCEEEEEcCCCEEEECcCCCEEEEcCCCCCCEEEE
Confidence 57899999999999999999999999998653 579999999999999999999999999 888766543
No 94
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=98.64 E-value=2e-07 Score=92.90 Aligned_cols=82 Identities=17% Similarity=0.151 Sum_probs=62.9
Q ss_pred ceeecCCceEEEeeeC--CC-------eEEEEEcCCCcCCccccC-ccEEEEEEeCEEEEEEEeC--CeEE--EecCCcE
Q 021698 197 PVEMIPGGSMKIIRES--PT-------SAIVRFKAGSVEPAHHHT-FGHDLVVLEGKKSVWNLTK--GERF--DLTVGDY 262 (309)
Q Consensus 197 ~~~~~pgg~~~il~~~--~~-------~~~v~l~pG~~~p~H~H~-~~e~vyVl~G~l~v~~~~~--~~~~--~L~pGd~ 262 (309)
++....|+.++.+... |. ...++++||+..++|||+ ..|++||++|++++++... .+.+ .|++||+
T Consensus 347 ~~~~~~gG~v~~~~~~~fP~L~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv 426 (510)
T 3c3v_A 347 DIYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHV 426 (510)
T ss_dssp SEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCE
T ss_pred CcccCCCeEEEEeccccCcccccceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcE
Confidence 3445678888766432 21 267899999999999999 4689999999999963222 2444 4999999
Q ss_pred EEECCCCcEEEEEcCCe
Q 021698 263 LFTPAGDVHRVKYYEET 279 (309)
Q Consensus 263 i~iP~g~~H~~~n~~d~ 279 (309)
++||+|.+|.+.| ++.
T Consensus 427 ~viP~G~~H~~~N-g~e 442 (510)
T 3c3v_A 427 LVVPQNFAVAGKS-QSD 442 (510)
T ss_dssp EEECTTCEEEEEE-CSS
T ss_pred EEECCCCeEEEEe-CCC
Confidence 9999999999999 543
No 95
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.61 E-value=1.9e-07 Score=80.20 Aligned_cols=64 Identities=20% Similarity=0.230 Sum_probs=52.4
Q ss_pred cCCCcCCccccCccEEEEEEeCEEEEEEEeCC--eEEEecCCcEEEECCCCcEEEEEcC-CeEEEEE
Q 021698 221 KAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKG--ERFDLTVGDYLFTPAGDVHRVKYYE-ETEFFIK 284 (309)
Q Consensus 221 ~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~--~~~~L~pGd~i~iP~g~~H~~~n~~-d~~~~i~ 284 (309)
.|++...+|.|+.+|++||++|++.+.+..++ +...|++||.+.+|+|++|+....+ ++..+++
T Consensus 43 Gpn~r~d~H~h~~dE~FyvlkG~m~i~v~d~g~~~~v~l~eGE~f~lP~gvpH~P~r~~~e~~~lvi 109 (174)
T 1yfu_A 43 GPNHRTDYHDDPLEEFFYQLRGNAYLNLWVDGRRERADLKEGDIFLLPPHVRHSPQRPEAGSACLVI 109 (174)
T ss_dssp SCBCCCCEEECSSCEEEEEEESCEEEEEEETTEEEEEEECTTCEEEECTTCCEEEEBCCTTCEEEEE
T ss_pred CCCcCccCcCCCCceEEEEEeeEEEEEEEcCCceeeEEECCCCEEEeCCCCCcCccccCCCCEEEEE
Confidence 46677999999999999999999999632223 5899999999999999999997776 6655543
No 96
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=98.60 E-value=8.3e-08 Score=94.63 Aligned_cols=83 Identities=13% Similarity=0.111 Sum_probs=64.9
Q ss_pred cCCceEEEeeeCCC--------eEEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCC--------------------
Q 021698 201 IPGGSMKIIRESPT--------SAIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKG-------------------- 252 (309)
Q Consensus 201 ~pgg~~~il~~~~~--------~~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~-------------------- 252 (309)
..+|.++++..... ...+++.||+..++|+|+..+++||++|++.+.+...+
T Consensus 43 se~G~~~~~~~~~~~l~~~gvs~~r~~i~pggl~~Ph~h~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~ 122 (459)
T 2e9q_A 43 AEAGFTEVWDQDNDEFQCAGVNMIRHTIRPKGLLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFK 122 (459)
T ss_dssp ETTEEEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCC
T ss_pred cCCcEEEecCCCChhhccCceEEEEEEEcCCCEecceecCCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccc
Confidence 45666666543321 25688999999999999999999999999999632222
Q ss_pred ----eEEEecCCcEEEECCCCcEEEEEcCCeEEEE
Q 021698 253 ----ERFDLTVGDYLFTPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 253 ----~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i 283 (309)
+.+.|++||+++||+|++|++.|.+++.+.+
T Consensus 123 d~~q~~~~l~~GDv~~iPaG~~H~~~N~g~~~l~~ 157 (459)
T 2e9q_A 123 DQHQKIRPFREGDLLVVPAGVSHWMYNRGQSDLVL 157 (459)
T ss_dssp EEECCCEEEETTEEEEECTTCCEEEEECSSSCEEE
T ss_pred cccceeEEecCCCEEEECCCCCEEEEeCCCCCEEE
Confidence 2569999999999999999999999766544
No 97
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=98.58 E-value=1.2e-07 Score=93.88 Aligned_cols=83 Identities=13% Similarity=0.207 Sum_probs=66.0
Q ss_pred cCCceEEEeeeCCC--------eEEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCC--------------------
Q 021698 201 IPGGSMKIIRESPT--------SAIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKG-------------------- 252 (309)
Q Consensus 201 ~pgg~~~il~~~~~--------~~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~-------------------- 252 (309)
..+|.++++..... ...+++.||+..++|+|+..+++||++|++.+.+...+
T Consensus 28 se~G~~e~~~~~~~~l~~~gvs~~r~~l~Pggl~~Ph~~~a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~ 107 (476)
T 1fxz_A 28 SEGGLIETWNPNNKPFQCAGVALSRCTLNRNALRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRP 107 (476)
T ss_dssp ETTEEEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEECCEEEEEECTTCCCC----------------
T ss_pred cCCceEEeeCCCChhhccCceEEEEEEEcCCCEecceecCCceEEEEEecEEEEEEEcCCCcchhhcccccccccccccc
Confidence 45666666544321 25789999999999999999999999999998643211
Q ss_pred -----eEEEecCCcEEEECCCCcEEEEEcCCeEEEE
Q 021698 253 -----ERFDLTVGDYLFTPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 253 -----~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i 283 (309)
+.+.|++||+++||+|++|++.|.+++.+.+
T Consensus 108 ~d~~qk~~~l~~GDvi~iPaG~~h~~~N~G~~~l~~ 143 (476)
T 1fxz_A 108 QDRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVA 143 (476)
T ss_dssp --CCCCEEEECTTEEEEECTTCEEEEEECSSSCEEE
T ss_pred ccccceEEEEeCCCEEEECCCCcEEEEeCCCCCEEE
Confidence 3789999999999999999999999765543
No 98
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=98.53 E-value=1.6e-07 Score=92.46 Aligned_cols=84 Identities=13% Similarity=0.095 Sum_probs=67.5
Q ss_pred cCCceEEEeeeCCC--------eEEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCC--e-----------------
Q 021698 201 IPGGSMKIIRESPT--------SAIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKG--E----------------- 253 (309)
Q Consensus 201 ~pgg~~~il~~~~~--------~~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~--~----------------- 253 (309)
..+|.+++++.... ...+++.||+..++|+|...+++||++|++.+.+...+ +
T Consensus 30 se~G~~e~~d~~~~~l~~~gvs~~R~~i~P~gl~~Ph~h~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~~~ 109 (465)
T 3qac_A 30 AERGLTEVWDSNEQEFRCAGVSVIRRTIEPHGLLLPSFTSAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDERI 109 (465)
T ss_dssp ETTEEEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEEECTTCCCCC---------------
T ss_pred CCCcEEEEECCCChhhcccceEEEEEEEcCCcCcccEEcCCCEEEEEEECcEEEEEecCCCCceeecchhcccccccccc
Confidence 46788887754331 25788999999999999999999999999988643332 2
Q ss_pred ---------------------EEEecCCcEEEECCCCcEEEEEcCCeEEEEE
Q 021698 254 ---------------------RFDLTVGDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 254 ---------------------~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i~ 284 (309)
...+++||++++|+|+.|++.|.++.+++++
T Consensus 110 ~~~~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v 161 (465)
T 3qac_A 110 REQGSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAV 161 (465)
T ss_dssp ---------------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEE
T ss_pred ccccccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEE
Confidence 4589999999999999999999998766543
No 99
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=98.53 E-value=2e-07 Score=92.67 Aligned_cols=82 Identities=12% Similarity=0.144 Sum_probs=65.2
Q ss_pred CCceEEEeeeCCC--------eEEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeC----------------------
Q 021698 202 PGGSMKIIRESPT--------SAIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTK---------------------- 251 (309)
Q Consensus 202 pgg~~~il~~~~~--------~~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~---------------------- 251 (309)
.+|.++++..... ...+++.||+..++|+|+..+++||++|++.+.+...
T Consensus 26 e~G~~e~~~~~~~~l~~~gv~~~r~~i~pggl~~Ph~~~~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~~ 105 (493)
T 2d5f_A 26 EGGLIETWNSQHPELQCAGVTVSKRTLNRNGLHLPSYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQ 105 (493)
T ss_dssp SSEEEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEECSSCEEEEEEECEEEEEECCTTCCCCEEECC------------
T ss_pred CCcEEEEeCCCChhhccCCEEEEEEEeCCCcEeCceecCCCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccc
Confidence 4566666543321 2578999999999999999999999999999963321
Q ss_pred ------CeEEEecCCcEEEECCCCcEEEEEcCCeEEEE
Q 021698 252 ------GERFDLTVGDYLFTPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 252 ------~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i 283 (309)
.+.+.|++||+++||+|++|++.|.+++.+.+
T Consensus 106 ~~~d~~qkv~~l~~GDvi~iPaG~~h~~~N~g~~~l~~ 143 (493)
T 2d5f_A 106 QLQDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVA 143 (493)
T ss_dssp -CSEEESCEEEEETTEEEEECTTCCEEEEECSSSCEEE
T ss_pred ccccccceEEEecCCCEEEECCCCcEEEEeCCCCCEEE
Confidence 14689999999999999999999999866654
No 100
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.53 E-value=3.3e-07 Score=87.17 Aligned_cols=68 Identities=16% Similarity=0.154 Sum_probs=56.4
Q ss_pred EEEEcC---CCcCCccccCccEEEEEEeCEEEEEEEeCC-eEEEecCCcEEEECCCCcEEEEEcCCe-EEEEEEc
Q 021698 217 IVRFKA---GSVEPAHHHTFGHDLVVLEGKKSVWNLTKG-ERFDLTVGDYLFTPAGDVHRVKYYEET-EFFIKWD 286 (309)
Q Consensus 217 ~v~l~p---G~~~p~H~H~~~e~vyVl~G~l~v~~~~~~-~~~~L~pGd~i~iP~g~~H~~~n~~d~-~~~i~~~ 286 (309)
.+.+++ |...+.|.|++.+.+|||+|++++ .+++ +.+.|++||+++||+|++|.+.+.++. .++++..
T Consensus 253 ~i~~~~~~~g~~~~~h~~~~~~~~~vleG~~~i--~i~g~~~~~l~~Gd~~~iPag~~h~~~~~~~~~~~l~~~~ 325 (350)
T 1juh_A 253 TISMSTTPSTVTVPTWSFPGACAFQVQEGRVVV--QIGDYAATELGSGDVAFIPGGVEFKYYSEAYFSKVLFVSS 325 (350)
T ss_dssp EEEECCCCTTSCCCCBCCSSCEEEEEEESCEEE--EETTSCCEEECTTCEEEECTTCCEEEEESSSSEEEEEEEE
T ss_pred EEeeccccCCCCCCcccCCCcEEEEEEeeEEEE--EECCeEEEEeCCCCEEEECCCCCEEEEecCCeEEEEEEec
Confidence 455555 457788999999999999999999 6788 899999999999999999999998764 4444343
No 101
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.51 E-value=3.6e-07 Score=80.11 Aligned_cols=62 Identities=24% Similarity=0.288 Sum_probs=50.5
Q ss_pred EEEEcCCC----------cCCccccCccEEEEEEeCEEEEEEEeCC---e--EEEecCCcEEEECCCCcEEEEEcCCeE
Q 021698 217 IVRFKAGS----------VEPAHHHTFGHDLVVLEGKKSVWNLTKG---E--RFDLTVGDYLFTPAGDVHRVKYYEETE 280 (309)
Q Consensus 217 ~v~l~pG~----------~~p~H~H~~~e~vyVl~G~l~v~~~~~~---~--~~~L~pGd~i~iP~g~~H~~~n~~d~~ 280 (309)
++++.++. ..++|.|+..|++||++|++.+ .+++ + ...+++||+++||+|++|++.+.++..
T Consensus 78 ~v~~~p~~~p~~~~k~~~~~~~H~H~~~Ei~yVleG~G~f--~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~~~ 154 (191)
T 1vr3_A 78 IITICKDTLPNYEEKIKMFFEEHLHLDEEIRYILEGSGYF--DVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKNY 154 (191)
T ss_dssp EEEESTTTSTTHHHHHHHHHSCEECSSCEEEEEEEEEEEE--EEECTTSCEEEEEEETTEEEEECTTCCEEEEECTTCC
T ss_pred EEEECCCcCcchhhhhccCCcceECCcceEEEEEeceEEE--EECCCCCeEEEEEECCCCEEEECcCCcCCcccCCCCC
Confidence 56666664 2388999999999999999999 4554 3 458999999999999999999876643
No 102
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=98.51 E-value=2.5e-07 Score=91.93 Aligned_cols=80 Identities=18% Similarity=0.149 Sum_probs=61.4
Q ss_pred eeecCCceEEEeeeC--CC-------eEEEEEcCCCcCCccccCc-cEEEEEEeCEEEEEEEeC--CeE--EEecCCcEE
Q 021698 198 VEMIPGGSMKIIRES--PT-------SAIVRFKAGSVEPAHHHTF-GHDLVVLEGKKSVWNLTK--GER--FDLTVGDYL 263 (309)
Q Consensus 198 ~~~~pgg~~~il~~~--~~-------~~~v~l~pG~~~p~H~H~~-~e~vyVl~G~l~v~~~~~--~~~--~~L~pGd~i 263 (309)
+....++.++.+... |. ...+++.||+..++|||+. .|++||++|++++++... .+. ..|++||++
T Consensus 343 ~~~~~gG~v~~~~~~~~P~L~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~ 422 (493)
T 2d5f_A 343 FYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLL 422 (493)
T ss_dssp EEETTTEEEEEESTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEE
T ss_pred cccCCCeEEEEeccccCccccccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEE
Confidence 444667887766432 21 2678899999999999995 689999999999963221 233 459999999
Q ss_pred EECCCCcEEEEEcC
Q 021698 264 FTPAGDVHRVKYYE 277 (309)
Q Consensus 264 ~iP~g~~H~~~n~~ 277 (309)
+||+|.+|...|.+
T Consensus 423 vvP~G~~H~~~n~~ 436 (493)
T 2d5f_A 423 VVPQNFVVAEQGGE 436 (493)
T ss_dssp EECTTCEEEEEEEE
T ss_pred EECCCCeEeeeeCC
Confidence 99999999998854
No 103
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=98.46 E-value=2.5e-07 Score=89.68 Aligned_cols=89 Identities=15% Similarity=0.122 Sum_probs=68.4
Q ss_pred CCceeecCCceEEEe---ee-------CC-C-eEEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe--CCeEEEecCC
Q 021698 195 LNPVEMIPGGSMKII---RE-------SP-T-SAIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT--KGERFDLTVG 260 (309)
Q Consensus 195 ~~~~~~~pgg~~~il---~~-------~~-~-~~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~--~~~~~~L~pG 260 (309)
+...--..+|.++.+ .. .. . ...+++.||+..++|+|...+++||++|++++.+.. +..++.|++|
T Consensus 22 ~~~~~~~e~G~i~~l~~~~~~~~~l~~~~~~s~~~~~l~pgg~~~ph~~~a~ei~yVl~G~~~v~~v~~~~~~~~~l~~G 101 (397)
T 2phl_A 22 WNTLFKNQYGHIRVLQRFDQQSKRLQNLEDYRLVEFRSKPETLLLPQQADAELLLVVRSGSAILVLVKPDDRREYFFLTS 101 (397)
T ss_dssp EEEEEEETTEEEEEECCHHHHCGGGGGGTTCEEEEEEECSSEEEEEEEESEEEEEEEEESEEEEEEEETTTEEEEEEEES
T ss_pred ccceEEcCCEEEEEecccCCCChhhcccccEEEEEEEECCCcCccCEecCCCeEEEEEeeeEEEEEEeCCCcEEEEECCC
Confidence 333334567777765 22 11 1 267899999999999999999999999999996321 4567899999
Q ss_pred cE------EEECCCCcEEEEEcC-CeEEEE
Q 021698 261 DY------LFTPAGDVHRVKYYE-ETEFFI 283 (309)
Q Consensus 261 d~------i~iP~g~~H~~~n~~-d~~~~i 283 (309)
|. ++||+|++|++.|.+ ++.+.+
T Consensus 102 Dv~~~~~~~~iP~G~~h~~~N~g~~~~l~~ 131 (397)
T 2phl_A 102 DNPIFSDHQKIPAGTIFYLVNPDPKEDLRI 131 (397)
T ss_dssp SCTTSCSEEEECTTCEEEEEECCSSCCEEE
T ss_pred CcccccceEEECCCCcEEEEeCCCCCCeEE
Confidence 99 999999999999998 555544
No 104
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=98.45 E-value=3.9e-07 Score=90.76 Aligned_cols=83 Identities=11% Similarity=0.197 Sum_probs=65.3
Q ss_pred cCCceEEEeeeCCC--------eEEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCC--------------------
Q 021698 201 IPGGSMKIIRESPT--------SAIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKG-------------------- 252 (309)
Q Consensus 201 ~pgg~~~il~~~~~--------~~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~-------------------- 252 (309)
..+|.+.++..... ...+++.||+...+|+|+..+++||++|++.+.+...+
T Consensus 28 se~G~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~ 107 (510)
T 3c3v_A 28 SEGGYIETWNPNNQEFECAGVALSRLVLRRNALRRPFYSNAPQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRP 107 (510)
T ss_dssp ETTEEEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEECSSCEEEEEEECCEEEEEECTTCCCCEEEECCC---------
T ss_pred cCCceEEEeCCCCcccccCcEEEEEEEECCCCCccceecCCCeEEEEEeCEEEEEEEeCCCccccccccccccccccccc
Confidence 35566666543321 26789999999999999999999999999999644321
Q ss_pred ------------------eEEEecCCcEEEECCCCcEEEEEcCCeEEEE
Q 021698 253 ------------------ERFDLTVGDYLFTPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 253 ------------------~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i 283 (309)
+.+.|++||+++||+|++|++.|.+++.+.+
T Consensus 108 ~~~~~~~~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~ 156 (510)
T 3c3v_A 108 PRRLQEEDQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVA 156 (510)
T ss_dssp -----------CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEE
T ss_pred cccccccccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEE
Confidence 1378999999999999999999999866544
No 105
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.45 E-value=1.9e-06 Score=74.02 Aligned_cols=63 Identities=11% Similarity=0.043 Sum_probs=51.9
Q ss_pred CCCcCCccccCccEEEEEEeCEEEEEEEeCC------eEEEecCCcEEEECCCCcEEEEEcCCeEEEEE
Q 021698 222 AGSVEPAHHHTFGHDLVVLEGKKSVWNLTKG------ERFDLTVGDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 222 pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~------~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i~ 284 (309)
|+....+|+|+.+|++|+++|++.+.+..++ +...+++||.+.+|+|++|+.....++..+++
T Consensus 43 Pn~r~D~H~~~~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~~e~v~lvi 111 (176)
T 1zvf_A 43 PNERTDYHINPTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSPVRFADTVGIVV 111 (176)
T ss_dssp SBCCSCEEECSSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEEEECTTCEEEEE
T ss_pred CCcCCcCcCCCCceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCCcccCCcEEEEE
Confidence 5577899999999999999999999643324 48999999999999999999976666655543
No 106
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=98.43 E-value=8.4e-07 Score=88.36 Aligned_cols=81 Identities=12% Similarity=0.155 Sum_probs=61.6
Q ss_pred CceeecCCceEEEeeeC--CC-------eEEEEEcCCCcCCccccCc-cEEEEEEeCEEEEEEEeC-C-e--EEEecCCc
Q 021698 196 NPVEMIPGGSMKIIRES--PT-------SAIVRFKAGSVEPAHHHTF-GHDLVVLEGKKSVWNLTK-G-E--RFDLTVGD 261 (309)
Q Consensus 196 ~~~~~~pgg~~~il~~~--~~-------~~~v~l~pG~~~p~H~H~~-~e~vyVl~G~l~v~~~~~-~-~--~~~L~pGd 261 (309)
.++....|+.++.+... |. ...+.+.||+..++|||+. .|++||++|++++++... + + +..|++||
T Consensus 368 ~d~~n~~GG~v~~a~~~~fP~L~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GD 447 (531)
T 3fz3_A 368 ADIFSPRAGRISTLNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQ 447 (531)
T ss_dssp CSEEETTTEEEEEESTTTCTHHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTC
T ss_pred CCcccCCCeEEEEeccccCCccccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCe
Confidence 33445568887766432 21 2678999999999999986 689999999999974332 2 2 57899999
Q ss_pred EEEECCCCcEEEEEc
Q 021698 262 YLFTPAGDVHRVKYY 276 (309)
Q Consensus 262 ~i~iP~g~~H~~~n~ 276 (309)
+++||+|.+|...+.
T Consensus 448 V~v~P~G~~H~~~ag 462 (531)
T 3fz3_A 448 LFIVPQNHGVIQQAG 462 (531)
T ss_dssp EEEECTTCEEEEEEE
T ss_pred EEEECCCCeEEEecC
Confidence 999999999976543
No 107
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=98.41 E-value=1.4e-06 Score=85.92 Aligned_cols=82 Identities=16% Similarity=0.150 Sum_probs=63.2
Q ss_pred ceeecCCceEEEeeeC--CC-------eEEEEEcCCCcCCccccCc-cEEEEEEeCEEEEEEEeC--CeEEE--ecCCcE
Q 021698 197 PVEMIPGGSMKIIRES--PT-------SAIVRFKAGSVEPAHHHTF-GHDLVVLEGKKSVWNLTK--GERFD--LTVGDY 262 (309)
Q Consensus 197 ~~~~~pgg~~~il~~~--~~-------~~~v~l~pG~~~p~H~H~~-~e~vyVl~G~l~v~~~~~--~~~~~--L~pGd~ 262 (309)
++....+|.++.+... |. ...+.+.||+..++|||+. .|++||++|++++++... .+.+. |.+||.
T Consensus 297 ~~~~~~gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv 376 (459)
T 2e9q_A 297 DVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQV 376 (459)
T ss_dssp SEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCE
T ss_pred CcccCCCeeEEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcE
Confidence 3445678888776432 21 2678999999999999996 488999999999974321 35554 999999
Q ss_pred EEECCCCcEEEEEcCCe
Q 021698 263 LFTPAGDVHRVKYYEET 279 (309)
Q Consensus 263 i~iP~g~~H~~~n~~d~ 279 (309)
++||+|.+|...| ++.
T Consensus 377 ~v~P~G~~H~~~n-g~~ 392 (459)
T 2e9q_A 377 LMIPQNFVVIKRA-SDR 392 (459)
T ss_dssp EEECTTCEEEEEE-EEE
T ss_pred EEECCCCEEEEEe-CCC
Confidence 9999999999999 533
No 108
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.40 E-value=1.5e-06 Score=83.37 Aligned_cols=69 Identities=22% Similarity=0.296 Sum_probs=62.5
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEEEEEc
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWD 286 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i~~~ 286 (309)
....++||...+.|+|...++++|++|+.++ .++++++.+++||.+++|++.+|+..|.++..++.+.+
T Consensus 282 ~~~~L~pG~~t~~hRht~s~Vy~V~eG~G~~--~I~~~~~~w~~gD~fvvP~w~~h~~~n~~~a~Lf~~~D 350 (368)
T 3nw4_A 282 EFHRLRAGTETATRNEVGSTVFQVFEGAGAV--VMNGETTKLEKGDMFVVPSWVPWSLQAETQFDLFRFSD 350 (368)
T ss_dssp EEEEECTTCBCCCEEESSCEEEEEEESCEEE--EETTEEEEECTTCEEEECTTCCEEEEESSSEEEEEEES
T ss_pred heEEECCCCccCCeeccccEEEEEEeCcEEE--EECCEEEEecCCCEEEECCCCcEEEEeCCCEEEEEEeC
Confidence 5678999999999999999999999999999 78999999999999999999999999987777665544
No 109
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.39 E-value=1.1e-06 Score=72.64 Aligned_cols=48 Identities=21% Similarity=0.240 Sum_probs=45.3
Q ss_pred ccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcC
Q 021698 228 AHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYE 277 (309)
Q Consensus 228 ~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~ 277 (309)
+|.|+..+++||++|++++ .++++.+.+++||.+++|||++|++.+.+
T Consensus 33 p~~h~~~~i~~v~~G~~~~--~i~~~~~~l~~Gd~~~i~p~~~H~~~~~~ 80 (164)
T 2arc_A 33 PLGMKGYILNLTIRGQGVV--KNQGREFVCRPGDILLFPPGEIHHYGRHP 80 (164)
T ss_dssp TTCCSSEEEEEEEEECEEE--EETTEEEEECTTCEEEECTTCCEEEEECT
T ss_pred ccCCCceEEEEEEEeEEEE--EECCEEEEecCCeEEEEcCCCCEEEEeCC
Confidence 6889999999999999999 78999999999999999999999998875
No 110
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.38 E-value=8.2e-07 Score=76.74 Aligned_cols=61 Identities=23% Similarity=0.320 Sum_probs=50.4
Q ss_pred EEEEEcCCCcCCccccCc-------cEEEEEEeCEEEEEEEeCCeE---------------------EEecCCcEEEECC
Q 021698 216 AIVRFKAGSVEPAHHHTF-------GHDLVVLEGKKSVWNLTKGER---------------------FDLTVGDYLFTPA 267 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~-------~e~vyVl~G~l~v~~~~~~~~---------------------~~L~pGd~i~iP~ 267 (309)
.++.+.||+..|.|.|+. .|-++|+.|.++++ ++++. ..|+|||++.|||
T Consensus 56 K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~--~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIpp 133 (175)
T 2y0o_A 56 KELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLY--VEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIPP 133 (175)
T ss_dssp EEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEE--ESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEECT
T ss_pred EEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEE--ECCccccCcceeccCCceeeecCCcEEEECCCCEEEECC
Confidence 367889999999999987 34456999999994 46644 5999999999999
Q ss_pred CCcEEEEEcCC
Q 021698 268 GDVHRVKYYEE 278 (309)
Q Consensus 268 g~~H~~~n~~d 278 (309)
|++|++++.++
T Consensus 134 g~~H~f~agee 144 (175)
T 2y0o_A 134 NTKHWFQAGEE 144 (175)
T ss_dssp TCCEEEEEEEE
T ss_pred CCcEEEEeCCC
Confidence 99999999433
No 111
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=98.37 E-value=2.6e-06 Score=82.46 Aligned_cols=88 Identities=18% Similarity=0.076 Sum_probs=67.1
Q ss_pred ceeecCCceEEEeeeCCC---eEEEEEcCCCcCCccccCc-cEEEEEEeCEEEEEEEeC-------Ce---EEEecCCcE
Q 021698 197 PVEMIPGGSMKIIRESPT---SAIVRFKAGSVEPAHHHTF-GHDLVVLEGKKSVWNLTK-------GE---RFDLTVGDY 262 (309)
Q Consensus 197 ~~~~~pgg~~~il~~~~~---~~~v~l~pG~~~p~H~H~~-~e~vyVl~G~l~v~~~~~-------~~---~~~L~pGd~ 262 (309)
+....++|+++.+..... ...+.+.||+..++|||+. .|+.||++|++++++... +. +..|++||.
T Consensus 220 p~~~n~~G~~~~v~~~~l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~GDV 299 (397)
T 2phl_A 220 NTIGNEFGNLTERTDNSLNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKDDV 299 (397)
T ss_dssp CEEEETTEEEEEEEETTTTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETTCE
T ss_pred CcccCCCCeEEEEeeccCCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecCCCE
Confidence 333456777765544322 2678999999999999985 578899999999974432 21 478999999
Q ss_pred EEECCCCcEEEEEcCCeEEEEE
Q 021698 263 LFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 263 i~iP~g~~H~~~n~~d~~~~i~ 284 (309)
++||+|.+|...|.++..++..
T Consensus 300 ~vvP~G~~h~~~n~~~l~~l~f 321 (397)
T 2phl_A 300 FVIPAAYPVAIKATSNVNFTGF 321 (397)
T ss_dssp EEECTTCCEEEEESSSEEEEEE
T ss_pred EEECCCCeEEEEeCCCeEEEEE
Confidence 9999999999999987666543
No 112
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.34 E-value=1.9e-07 Score=81.11 Aligned_cols=53 Identities=19% Similarity=0.068 Sum_probs=44.7
Q ss_pred CCccccCccEEEEEEeCEEEEEEEeCCeE--EEecCCcEEEECCCCcEEEEEcCC
Q 021698 226 EPAHHHTFGHDLVVLEGKKSVWNLTKGER--FDLTVGDYLFTPAGDVHRVKYYEE 278 (309)
Q Consensus 226 ~p~H~H~~~e~vyVl~G~l~v~~~~~~~~--~~L~pGd~i~iP~g~~H~~~n~~d 278 (309)
.++|.|+..|+.||++|++.+.+..+++. ..+++||.++||+|++|++.+.++
T Consensus 93 ~~~H~H~~~Ei~~Vl~G~g~~~i~~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~ 147 (179)
T 1zrr_A 93 LNEHTHGEDEVRFFVEGAGLFCLHIGDEVFQVLCEKNDLISVPAHTPHWFDMGSE 147 (179)
T ss_dssp HSCBEESSCEEEEEEESCCCCCEECSSCEEEEECCCSCEEEECTTCCBCCCCSSC
T ss_pred ccceECChheEEEEEcceEEEEEEeCCEEEEEEECCCCEEEECCCCeEeeecCCC
Confidence 57899999999999999999832226776 459999999999999999987665
No 113
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=98.33 E-value=3.3e-06 Score=82.20 Aligned_cols=90 Identities=20% Similarity=0.186 Sum_probs=67.3
Q ss_pred CceeecCCceEEEeeeCCC---------eEEEEEcCCCcCCccccCc-cEEEEEEeCEEEEEEEeC-C------------
Q 021698 196 NPVEMIPGGSMKIIRESPT---------SAIVRFKAGSVEPAHHHTF-GHDLVVLEGKKSVWNLTK-G------------ 252 (309)
Q Consensus 196 ~~~~~~pgg~~~il~~~~~---------~~~v~l~pG~~~p~H~H~~-~e~vyVl~G~l~v~~~~~-~------------ 252 (309)
.+....++|.+..+..... ...+.+.||+..++|||+. .|++||++|++++++... +
T Consensus 223 ~p~~~~~~G~~~~~~~~~~P~L~~l~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~~~ 302 (416)
T 1uij_A 223 NPIYSNNFGKFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIKEQQQKQKQEEEPL 302 (416)
T ss_dssp CCSEECSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC------------C
T ss_pred CCCccCCCceEEEEChHHCccchhcCcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCCCcccccccccccc
Confidence 4444566777666543221 2578999999999999985 578899999999974332 1
Q ss_pred --eEE--EecCCcEEEECCCCcEEEEEcCCeEEEEEE
Q 021698 253 --ERF--DLTVGDYLFTPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 253 --~~~--~L~pGd~i~iP~g~~H~~~n~~d~~~~i~~ 285 (309)
+.+ .|++||.++||+|.+|...|.++..++...
T Consensus 303 ~~~~~~~~l~~Gdv~vvP~g~~h~~~n~~~~~~l~f~ 339 (416)
T 1uij_A 303 EVQRYRAELSEDDVFVIPAAYPFVVNATSNLNFLAFG 339 (416)
T ss_dssp CEEEEEEEEETTCEEEECTTCCEEEEESSSEEEEEEE
T ss_pred ceEEEEEEecCCcEEEECCCCeEEEEcCCCeEEEEEE
Confidence 356 899999999999999999999665554443
No 114
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=98.30 E-value=3.4e-06 Score=82.61 Aligned_cols=89 Identities=18% Similarity=0.200 Sum_probs=66.5
Q ss_pred CCceeecCCceEEEeeeCCC---------eEEEEEcCCCcCCccccCc-cEEEEEEeCEEEEEEEeCC------------
Q 021698 195 LNPVEMIPGGSMKIIRESPT---------SAIVRFKAGSVEPAHHHTF-GHDLVVLEGKKSVWNLTKG------------ 252 (309)
Q Consensus 195 ~~~~~~~pgg~~~il~~~~~---------~~~v~l~pG~~~p~H~H~~-~e~vyVl~G~l~v~~~~~~------------ 252 (309)
..+.....+|.++.+..... ...+.+.||+..++|||+. .|++||++|++++++...+
T Consensus 239 ~~p~~~~~gG~v~~~~~~~~P~L~~l~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~~ 318 (434)
T 2ea7_A 239 SKPIYSNKFGRWYEMTPEKNPQLKDLDVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEESL 318 (434)
T ss_dssp SCCSEEETTEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCCE
T ss_pred CCCceeCCCcEEEEEChhhCccccccCcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEecCccccccccccCc
Confidence 34444466777776633221 2578999999999999985 5788999999999743321
Q ss_pred --eEE--EecCCcEEEECCCCcEEEEEcCCeEEEE
Q 021698 253 --ERF--DLTVGDYLFTPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 253 --~~~--~L~pGd~i~iP~g~~H~~~n~~d~~~~i 283 (309)
+.+ .|++||.++||+|.+|...|.++..++.
T Consensus 319 ~~r~~~~~l~~Gdv~vvP~g~~h~~~n~~~~~~v~ 353 (434)
T 2ea7_A 319 EVQRYRAELSEDDVFVIPAAYPVAINATSNLNFFA 353 (434)
T ss_dssp EEEEEEEEECTTCEEEECTTCCEEEEESSSEEEEE
T ss_pred ceEEEEEEecCCcEEEECCCCeEEEEcCCCeEEEE
Confidence 155 8999999999999999999996655543
No 115
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=98.30 E-value=5.6e-06 Score=82.19 Aligned_cols=82 Identities=15% Similarity=0.167 Sum_probs=62.9
Q ss_pred CceeecCCceEEEeeeC--CC-------eEEEEEcCCCcCCccccCc-cEEEEEEeCEEEEEEEeC--CeEE--EecCCc
Q 021698 196 NPVEMIPGGSMKIIRES--PT-------SAIVRFKAGSVEPAHHHTF-GHDLVVLEGKKSVWNLTK--GERF--DLTVGD 261 (309)
Q Consensus 196 ~~~~~~pgg~~~il~~~--~~-------~~~v~l~pG~~~p~H~H~~-~e~vyVl~G~l~v~~~~~--~~~~--~L~pGd 261 (309)
.++....+|.++.+... |. ...+.+.||+..++|||+. .|++||++|++++++... .+.+ .|++||
T Consensus 332 ~di~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GD 411 (496)
T 3ksc_A 332 PDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGR 411 (496)
T ss_dssp CSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTC
T ss_pred CCcccCCCeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecCCe
Confidence 34555568888876432 21 2678999999999999986 589999999999985432 2344 499999
Q ss_pred EEEECCCCcEEEEEcC
Q 021698 262 YLFTPAGDVHRVKYYE 277 (309)
Q Consensus 262 ~i~iP~g~~H~~~n~~ 277 (309)
.++||.|.+|...|.+
T Consensus 412 V~v~P~G~~H~~~a~~ 427 (496)
T 3ksc_A 412 ALTVPQNYAVAAKSLS 427 (496)
T ss_dssp EEEECTTCEEEEEECS
T ss_pred EEEECCCCEEEEEeCC
Confidence 9999999999877764
No 116
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=98.28 E-value=1.5e-06 Score=86.29 Aligned_cols=70 Identities=13% Similarity=0.142 Sum_probs=59.6
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCC--e----------------------EEEecCCcEEEECCCCcE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKG--E----------------------RFDLTVGDYLFTPAGDVH 271 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~--~----------------------~~~L~pGd~i~iP~g~~H 271 (309)
..+++.||+..++|+|...+++||++|++.+.+...+ + .+.|++||.+.||+|++|
T Consensus 49 ~R~~i~pggl~lPh~~~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~viPaG~~h 128 (496)
T 3ksc_A 49 SRATLQRNALRRPYYSNAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRHQKVNRFREGDIIAVPTGIVF 128 (496)
T ss_dssp EEEEECTTEEEEEEEESSCEEEEEEECCEEEEEECTTCCCC---------------CCCCCCEEEECTTEEEEECTTCEE
T ss_pred EEEEecCCCEeCceEcCCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccccccchheeeccCCCCEEEECCCCcE
Confidence 5788999999999999999999999999998643332 3 359999999999999999
Q ss_pred EEEEcCCeEEEEEE
Q 021698 272 RVKYYEETEFFIKW 285 (309)
Q Consensus 272 ~~~n~~d~~~~i~~ 285 (309)
++.|.++..++++.
T Consensus 129 ~~~N~G~~~lv~v~ 142 (496)
T 3ksc_A 129 WMYNDQDTPVIAVS 142 (496)
T ss_dssp EEEECSSSCEEEEE
T ss_pred EEEcCCCCCEEEEE
Confidence 99999988776543
No 117
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=98.28 E-value=4.1e-06 Score=82.58 Aligned_cols=81 Identities=15% Similarity=0.130 Sum_probs=61.3
Q ss_pred eeecCCceEEEeeeC--CC-------eEEEEEcCCCcCCccccCc-cEEEEEEeCEEEEEEEeC--CeEE--EecCCcEE
Q 021698 198 VEMIPGGSMKIIRES--PT-------SAIVRFKAGSVEPAHHHTF-GHDLVVLEGKKSVWNLTK--GERF--DLTVGDYL 263 (309)
Q Consensus 198 ~~~~pgg~~~il~~~--~~-------~~~v~l~pG~~~p~H~H~~-~e~vyVl~G~l~v~~~~~--~~~~--~L~pGd~i 263 (309)
+....+|.++.+... |. ...+.+.||+..++|||+. .|++||++|++++++... .+.+ .|++||.+
T Consensus 299 ~~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~ 378 (466)
T 3kgl_A 299 VYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLL 378 (466)
T ss_dssp EEETTTEEEEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEE
T ss_pred cccCCCceEEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEE
Confidence 344567777766432 21 2678999999999999975 589999999999975432 2334 59999999
Q ss_pred EECCCCcEEEEEcCCe
Q 021698 264 FTPAGDVHRVKYYEET 279 (309)
Q Consensus 264 ~iP~g~~H~~~n~~d~ 279 (309)
+||.|.+|.. +.++.
T Consensus 379 v~P~G~~H~~-~ag~e 393 (466)
T 3kgl_A 379 SIPQGFSVVK-RATSE 393 (466)
T ss_dssp EECTTCEEEE-EECSS
T ss_pred EECCCCeEEE-EcCCC
Confidence 9999999987 55543
No 118
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=98.11 E-value=5.6e-06 Score=81.56 Aligned_cols=83 Identities=10% Similarity=0.063 Sum_probs=64.4
Q ss_pred cCCceEEEeeeCCC--------eEEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeC---C-----------------
Q 021698 201 IPGGSMKIIRESPT--------SAIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTK---G----------------- 252 (309)
Q Consensus 201 ~pgg~~~il~~~~~--------~~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~---~----------------- 252 (309)
..+|.+.++..... ...+++.||+..++|+|+..+++||++|++.+.+... .
T Consensus 23 se~G~~e~w~~~~~~L~~~gvs~~r~~i~p~Gl~lPh~~~a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~~~ 102 (466)
T 3kgl_A 23 AEAGRIEVWDHHAPQLRCSGVSFVRYIIESKGLYLPSFFSTAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSPFG 102 (466)
T ss_dssp ETTEEEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC-----
T ss_pred CCCcEEEEECCCChhhccCCeEEEEEEECCCCEeCCeeCCCCeEEEEEeCeEEEEEecCCCcchhhcccccccccccccc
Confidence 35666666643221 2578899999999999999999999999998864322 0
Q ss_pred ------------------------------------------eEEEecCCcEEEECCCCcEEEEEcCCeEEEE
Q 021698 253 ------------------------------------------ERFDLTVGDYLFTPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 253 ------------------------------------------~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i 283 (309)
+.+.|++||.++||+|++|++.|.+++.+.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e~L~~ 175 (466)
T 3kgl_A 103 EGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVI 175 (466)
T ss_dssp ------------------------------------CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCCCcEEE
Confidence 1258999999999999999999999776554
No 119
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=98.10 E-value=1.8e-05 Score=78.04 Aligned_cols=81 Identities=12% Similarity=0.140 Sum_probs=62.0
Q ss_pred CCceeecCCceEEEeeeC--CC-------eEEEEEcCCCcCCccccCc-cEEEEEEeCEEEEEEEeC--CeEE--EecCC
Q 021698 195 LNPVEMIPGGSMKIIRES--PT-------SAIVRFKAGSVEPAHHHTF-GHDLVVLEGKKSVWNLTK--GERF--DLTVG 260 (309)
Q Consensus 195 ~~~~~~~pgg~~~il~~~--~~-------~~~v~l~pG~~~p~H~H~~-~e~vyVl~G~l~v~~~~~--~~~~--~L~pG 260 (309)
..++....+|.++.+... |. ...+.+.||+..++|||+. .|++||++|++++++... .+.+ .|++|
T Consensus 296 ~~dv~~~~gG~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~G 375 (465)
T 3qac_A 296 KADVYTPEAGRLTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSRG 375 (465)
T ss_dssp TCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETT
T ss_pred cCCcccCCCceEEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecCC
Confidence 344555668888776432 21 2678999999999999986 588999999999975432 2344 49999
Q ss_pred cEEEECCCCcEEEEE
Q 021698 261 DYLFTPAGDVHRVKY 275 (309)
Q Consensus 261 d~i~iP~g~~H~~~n 275 (309)
|.++||.|.+|...+
T Consensus 376 DVfvvP~g~~h~~~a 390 (465)
T 3qac_A 376 QLVVVPQNFAIVKQA 390 (465)
T ss_dssp CEEEECTTCEEEEEE
T ss_pred eEEEECCCcEEEEEc
Confidence 999999999998764
No 120
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=98.09 E-value=2.1e-05 Score=77.16 Aligned_cols=87 Identities=17% Similarity=0.168 Sum_probs=64.6
Q ss_pred CceeecCCceEEEeeeCCC---------eEEEEEcCCCcCCccccCc-cEEEEEEeCEEEEEEEeCC----------e--
Q 021698 196 NPVEMIPGGSMKIIRESPT---------SAIVRFKAGSVEPAHHHTF-GHDLVVLEGKKSVWNLTKG----------E-- 253 (309)
Q Consensus 196 ~~~~~~pgg~~~il~~~~~---------~~~v~l~pG~~~p~H~H~~-~e~vyVl~G~l~v~~~~~~----------~-- 253 (309)
.+.-...+|.+..+..... ...+.+.||+..++|||+. .|++||++|++++++.... +
T Consensus 255 ~p~~~~~~G~v~~~~~~~fP~L~~l~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~~~~~g~~~~ 334 (445)
T 2cav_A 255 DPIYSNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQQQQGLESMQLR 334 (445)
T ss_dssp CCSEESSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC-----------CCE
T ss_pred CCCccCCCceEEEeChHHCcccccCCCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeCCCcccccccCcceE
Confidence 3433456777766543221 2678999999999999986 5778999999999754332 2
Q ss_pred --EEEecCCcEEEECCCCcEEEEEcCCeEEE
Q 021698 254 --RFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 254 --~~~L~pGd~i~iP~g~~H~~~n~~d~~~~ 282 (309)
+..|++||.++||.|.+|...|.++..++
T Consensus 335 ~~~~~l~~GdV~vvP~g~~h~~~n~~~~~~v 365 (445)
T 2cav_A 335 RYAATLSEGDIIVIPSSFPVALKAASDLNMV 365 (445)
T ss_dssp EEEEEECTTCEEEECTTCCEEEEESSSEEEE
T ss_pred EEEeEecCCcEEEEcCCcEEEEEcCCCeEEE
Confidence 45699999999999999999998654443
No 121
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=98.07 E-value=8.2e-06 Score=79.49 Aligned_cols=64 Identities=19% Similarity=0.267 Sum_probs=52.6
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe--CCeEEEecCCcEEEECCCCcEEEEEcCCe
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT--KGERFDLTVGDYLFTPAGDVHRVKYYEET 279 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~--~~~~~~L~pGd~i~iP~g~~H~~~n~~d~ 279 (309)
..+++.||+..++|+....+++||++|++.+.+.. +...+.|++||.+++|+|.+|++.|.++.
T Consensus 47 ~~~~l~p~gl~~Phh~~A~ei~yV~~G~g~~g~V~~~~~~~~~l~~GDv~~~P~G~~h~~~N~g~~ 112 (418)
T 3s7i_A 47 VQIEAKPNTLVLPKHADADNILVIQQGQATVTVANGNNRKSFNLDEGHALRIPSGFISYILNRHDN 112 (418)
T ss_dssp EEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECTTCEEEEEECCSS
T ss_pred EEEEecCCceeeeeeCCCCeEEEEEEeeEEEEEEecCCEEEEEecCCCEEEECCCCeEEEEecCCC
Confidence 56789999999999445566789999999986332 23578999999999999999999998743
No 122
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.02 E-value=1.2e-05 Score=66.79 Aligned_cols=62 Identities=16% Similarity=0.098 Sum_probs=49.4
Q ss_pred cCCccccCc-cEEEEEEeCEEEEEEEeC------CeEEEecCCcEEEECCCCcEEEEEcCCeEEEEEEc
Q 021698 225 VEPAHHHTF-GHDLVVLEGKKSVWNLTK------GERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWD 286 (309)
Q Consensus 225 ~~p~H~H~~-~e~vyVl~G~l~v~~~~~------~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i~~~ 286 (309)
-..+|.|.. .|+++|++|++++.+..+ ++...|+||+++.||.|+.|+.....++.++++=+
T Consensus 41 i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~e~~vLLiEp 109 (140)
T 3d0j_A 41 IAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQKDTKMMYVQD 109 (140)
T ss_dssp CCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECTTCEEEEEEE
T ss_pred CHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCCCceEEEEEEe
Confidence 345799975 678889999999942211 45799999999999999999999988888776544
No 123
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=97.97 E-value=1.4e-05 Score=79.63 Aligned_cols=85 Identities=9% Similarity=0.094 Sum_probs=66.5
Q ss_pred cCCceEEEeeeCCC--------eEEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeC---------------------
Q 021698 201 IPGGSMKIIRESPT--------SAIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTK--------------------- 251 (309)
Q Consensus 201 ~pgg~~~il~~~~~--------~~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~--------------------- 251 (309)
..+|.+..+..... ...+++.|++..++|.|+..+++||++|++.+-+...
T Consensus 28 se~G~~e~w~~~~p~l~~~Gvs~~R~~i~p~Gl~lPh~~~a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~~~~~~~~~ 107 (531)
T 3fz3_A 28 AEAGQIETWNFNQGDFQCAGVAASRITIQRNGLHLPSYSNAPQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQGRQQEQ 107 (531)
T ss_dssp ETTEEEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEECCTTCCCCEECCCC----------
T ss_pred cCCceEEEeCCCChhhccCcceEEEEEecCCCEeCCccCCCCeEEEEEECcEEEEEEcCCCccccccccccccccccccc
Confidence 35666666643221 2568899999999999999999999999998853221
Q ss_pred ---------------------------------------------------------------CeEEEecCCcEEEECCC
Q 021698 252 ---------------------------------------------------------------GERFDLTVGDYLFTPAG 268 (309)
Q Consensus 252 ---------------------------------------------------------------~~~~~L~pGd~i~iP~g 268 (309)
.+.+.+++||++.||+|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~vr~GDviaiPaG 187 (531)
T 3fz3_A 108 EQERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKTRRIREGDVVAIPAG 187 (531)
T ss_dssp ---------------------------------------------------------CCSCEESCCEEEETTEEEEECTT
T ss_pred cccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceeeecccCCcEEEECCC
Confidence 12467899999999999
Q ss_pred CcEEEEEcCCeEEEEEE
Q 021698 269 DVHRVKYYEETEFFIKW 285 (309)
Q Consensus 269 ~~H~~~n~~d~~~~i~~ 285 (309)
++|++.|.++.++++++
T Consensus 188 ~~~w~yN~G~~~l~iv~ 204 (531)
T 3fz3_A 188 VAYWSYNDGDQELVAVN 204 (531)
T ss_dssp CCEEEECCSSSCEEEEE
T ss_pred CeEEEEeCCCceEEEEE
Confidence 99999999998877655
No 124
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=97.97 E-value=9.6e-05 Score=63.49 Aligned_cols=67 Identities=16% Similarity=0.230 Sum_probs=54.8
Q ss_pred EEEEEcCCCcCCccccCcc-EEEEEEeCEEEEEEEe--CC-----eEEEecCCcEEEECCCCcEEEEEcCCeEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFG-HDLVVLEGKKSVWNLT--KG-----ERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~-e~vyVl~G~l~v~~~~--~~-----~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~ 282 (309)
.++...||..++.|-|... -++.||+|+++.+... ++ +...+.+|+.++.|++.+|++.|.++...+
T Consensus 72 ~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aV 146 (171)
T 3eqe_A 72 IVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMV 146 (171)
T ss_dssp EEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEE
T ss_pred EEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEE
Confidence 4678999999999999964 5667999999974221 33 478899999999999999999999875544
No 125
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=97.88 E-value=4.2e-05 Score=74.49 Aligned_cols=84 Identities=19% Similarity=0.183 Sum_probs=62.5
Q ss_pred CceeecCCceEEEeee--C-CC-------eEEEEEcCCCcCCccccC-ccEEEEEEeCEEEEEEEeCC------------
Q 021698 196 NPVEMIPGGSMKIIRE--S-PT-------SAIVRFKAGSVEPAHHHT-FGHDLVVLEGKKSVWNLTKG------------ 252 (309)
Q Consensus 196 ~~~~~~pgg~~~il~~--~-~~-------~~~v~l~pG~~~p~H~H~-~~e~vyVl~G~l~v~~~~~~------------ 252 (309)
.|.....+|.+..+.. . |. ...+++.||+..++|||+ ..+++||++|++++++...+
T Consensus 236 ~p~~~n~~G~~~~~~~~~~~p~L~~~gis~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~~~~~~ 315 (418)
T 3s7i_A 236 EPDLSNNFGKLFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRKEQQQRGRREEE 315 (418)
T ss_dssp CCSEEETTEEEEEECSBTTBHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEEC----------
T ss_pred CCceeCCCCeEEEechHHcchhhccCCeeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCCccccccccccc
Confidence 3333356777665532 2 21 267899999999999996 56889999999998744321
Q ss_pred ---------------e-EEEecCCcEEEECCCCcEEEEEcCCe
Q 021698 253 ---------------E-RFDLTVGDYLFTPAGDVHRVKYYEET 279 (309)
Q Consensus 253 ---------------~-~~~L~pGd~i~iP~g~~H~~~n~~d~ 279 (309)
. ...|++||.++||+|.+|+..|.++.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~~~~l 358 (418)
T 3s7i_A 316 EDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINASSEL 358 (418)
T ss_dssp ---------CCEEEEEEEEEECTTCEEEECTTCCEEEEESSCE
T ss_pred cccccccccccccceEEEeeeCCCCEEEECCCCEEEEECCCCE
Confidence 1 46789999999999999999887653
No 126
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=97.86 E-value=0.0001 Score=67.71 Aligned_cols=62 Identities=16% Similarity=0.160 Sum_probs=49.7
Q ss_pred CCCcCCccccCccEEEEEEeCEEEEEEEeCCe---EEEecCCcEEEECCCCcEEEEEcCCeEEEEE
Q 021698 222 AGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGE---RFDLTVGDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 222 pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~---~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i~ 284 (309)
|+....+|+-+.+|++|+++|.+.+.+. +++ ...+++|+.+.+|+|++|+.....++..+++
T Consensus 40 pN~R~d~H~~~~dE~FyqlkG~m~l~~~-d~g~~~~V~i~eGemfllP~gv~HsP~r~~et~gLvi 104 (286)
T 2qnk_A 40 PNTRKDYHIEEGEEVFYQLEGDMVLRVL-EQGKHRDVVIRQGEIFLLPARVPHSPQRFANTVGLVV 104 (286)
T ss_dssp CBCCCCEEECSSCEEEEEEESCEEEEEE-ETTEEEEEEECTTEEEEECTTCCEEEEECTTCEEEEE
T ss_pred CCcCccCcCCCCCeEEEEEeCeEEEEEE-eCCceeeEEECCCeEEEeCCCCCcCCcccCCeEEEEE
Confidence 4455889933467889999999999743 434 7899999999999999999988888776654
No 127
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=97.85 E-value=0.00016 Score=63.97 Aligned_cols=64 Identities=25% Similarity=0.347 Sum_probs=53.4
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe---------CCeEEEecCCcEEEECC--CCcEEEEEc-CCe
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT---------KGERFDLTVGDYLFTPA--GDVHRVKYY-EET 279 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~---------~~~~~~L~pGd~i~iP~--g~~H~~~n~-~d~ 279 (309)
.++...||...|.|.|....++.|++|+++.+.+. .++...+.+|+..++++ |..|++.|. ++.
T Consensus 82 ~~l~w~PGq~spiHdH~~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~~ 157 (208)
T 2gm6_A 82 VSFVWGPGQRTPIHDHTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDDR 157 (208)
T ss_dssp EEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSS
T ss_pred EEEEeCCCcccCcccCCcceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCCC
Confidence 56788999999999999888889999999874321 13468899999999999 999999998 444
No 128
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=97.68 E-value=0.00013 Score=68.25 Aligned_cols=72 Identities=21% Similarity=0.338 Sum_probs=56.7
Q ss_pred EEEEEcCCCcCCccccCc-cEEEEEEeCEEEEEEE--eCCeEEEecC-C---cEEEECCCCcEEEEEcCC-eEEEEEEcC
Q 021698 216 AIVRFKAGSVEPAHHHTF-GHDLVVLEGKKSVWNL--TKGERFDLTV-G---DYLFTPAGDVHRVKYYEE-TEFFIKWDG 287 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~-~e~vyVl~G~l~v~~~--~~~~~~~L~p-G---d~i~iP~g~~H~~~n~~d-~~~~i~~~g 287 (309)
.+.+.+||....+|+|.. .|.++|++|+..+.+. ..++.+.+.. | +.++||+|..|.+.|.++ ...++.|..
T Consensus 275 ~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~~~~~ 354 (369)
T 3st7_A 275 SVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIMWVN 354 (369)
T ss_dssp EEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCCCCEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEEEEES
T ss_pred EEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCCCcEEEEEecCCcceEEEeCCCceEEeEEcCCCcEEEEEecC
Confidence 567789999999999975 5888999999888321 3567777777 8 899999999999999994 344455543
No 129
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.62 E-value=0.0002 Score=64.60 Aligned_cols=67 Identities=18% Similarity=0.277 Sum_probs=52.7
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEE-EEEEc
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEF-FIKWD 286 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~-~i~~~ 286 (309)
.++++ .|.... -.+++.|..|||+|++++ ..+++.+.++|||+++||.|..|++...+.... ++.+.
T Consensus 50 G~~~~-~g~~~v-~~~p~dE~~~VleG~~~l--t~~g~~~~~~~Gd~~~ip~G~~~~w~~~~~~~~~y~~~~ 117 (238)
T 3myx_A 50 GIVEF-GTALSV-EAYPYTEMLVMHRGSVTL--TSGTDSVTLSTGESAVIGRGTQVRIDAQPESLWAFCAST 117 (238)
T ss_dssp EEEEE-CSEEEE-SSCSSEEEEEEEESEEEE--EETTEEEEEETTCEEEECTTCCEEEEECTTEEEEEEEEC
T ss_pred EEEEe-cccccc-ccCCCcEEEEEEEeEEEE--ECCCeEEEEcCCCEEEECCCCEEEEEecCCeEEEEEecc
Confidence 46666 554432 234568999999999999 558999999999999999999999999887654 44444
No 130
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.56 E-value=0.00032 Score=62.66 Aligned_cols=81 Identities=20% Similarity=0.302 Sum_probs=60.9
Q ss_pred CCceEEEeeeCC--CeEEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEE-cCC
Q 021698 202 PGGSMKIIRESP--TSAIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKY-YEE 278 (309)
Q Consensus 202 pgg~~~il~~~~--~~~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n-~~d 278 (309)
+|.....|..+. ...+++++||...+.|.| ..+++|||+|++.- ++ -.+.+|+.+..|+|..|...+ ...
T Consensus 133 ~Gv~~~~L~~~~~E~v~l~r~~~G~~~~~~~h-gG~EilVL~G~~~d----~~--~~~~~GsWlR~P~gs~h~~~ag~~g 205 (223)
T 3o14_A 133 EGISTSLLHEDERETVTHRKLEPGANLTSEAA-GGIEVLVLDGDVTV----ND--EVLGRNAWLRLPEGEALSATAGARG 205 (223)
T ss_dssp TTEEEEEEEECSSCEEEEEEECTTCEEEECCS-SCEEEEEEEEEEEE----TT--EEECTTEEEEECTTCCEEEEEEEEE
T ss_pred CCeEEEEEecCCCcEEEEEEECCCCccCCCCC-CcEEEEEEEeEEEE----CC--ceECCCeEEEeCCCCccCcEECCCC
Confidence 455566665554 347899999999999999 77778999999764 34 478899999999999999988 334
Q ss_pred eEEEEEEcCCcc
Q 021698 279 TEFFIKWDGRWD 290 (309)
Q Consensus 279 ~~~~i~~~g~~~ 290 (309)
+.+++. .|++.
T Consensus 206 ~~i~~k-~ghl~ 216 (223)
T 3o14_A 206 AKIWMK-TGHLR 216 (223)
T ss_dssp EEEEEE-ESGGG
T ss_pred eEEEEE-ecCCC
Confidence 444444 46553
No 131
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=97.54 E-value=0.00029 Score=58.64 Aligned_cols=70 Identities=19% Similarity=0.218 Sum_probs=52.2
Q ss_pred EcCCCcCCccccCc-cEEEEEEeCEEEEEEEeCC---eEEEecCCc-EEEECCCCcEEEEEcC-CeEEEEEEcCCcc
Q 021698 220 FKAGSVEPAHHHTF-GHDLVVLEGKKSVWNLTKG---ERFDLTVGD-YLFTPAGDVHRVKYYE-ETEFFIKWDGRWD 290 (309)
Q Consensus 220 l~pG~~~p~H~H~~-~e~vyVl~G~l~v~~~~~~---~~~~L~pGd-~i~iP~g~~H~~~n~~-d~~~~i~~~g~~~ 290 (309)
+++|....+|.|.. .|++++++|++.+.+ .++ +++.|.+.. .++||||++|.+.+.+ ++.++++.+++.+
T Consensus 42 ~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~l-dDg~~~~~~~L~~~~~gL~IppgvWh~~~~~s~~avllvlas~~Yd 117 (141)
T 2pa7_A 42 TKGEEPRGFHAHKKLEQVLVCLNGSCRVIL-DDGNIIQEITLDSPAVGLYVGPAVWHEMHDFSSDCVMMVLASDYYD 117 (141)
T ss_dssp CCSSCCEEEEEESSCCEEEEEEESCEEEEE-ECSSCEEEEEECCTTEEEEECTTCEEEEECCCTTCEEEEEESSCCC
T ss_pred cCCCCEECcCcCCCceEEEEEEccEEEEEE-ECCcEEEEEEECCCCcEEEeCCCEEEEEEEcCCCeEEEEECCCCcC
Confidence 45788889999975 577889999999953 222 345665544 6999999999999997 5666677766544
No 132
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.44 E-value=0.00034 Score=56.38 Aligned_cols=63 Identities=14% Similarity=0.163 Sum_probs=48.7
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETE 280 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~ 280 (309)
.+-...||.. .++.+...|++|+|+|+++++ ..+++...+++||++++|+|....+...+...
T Consensus 45 GvWe~tPG~~-~~~~~~~~E~~~iLeG~~~lt-~ddG~~~~l~aGD~~~~P~G~~gtWev~e~vr 107 (116)
T 3es4_A 45 AVWMAEPGIY-NYAGRDLEETFVVVEGEALYS-QADADPVKIGPGSIVSIAKGVPSRLEILSSFR 107 (116)
T ss_dssp EEEEECSEEE-EECCCSEEEEEEEEECCEEEE-ETTCCCEEECTTEEEEECTTCCEEEEECSCEE
T ss_pred EEEecCCcee-ECeeCCCcEEEEEEEeEEEEE-eCCCeEEEECCCCEEEECCCCeEEEEEeEEEe
Confidence 3456667643 344455569999999999995 34677799999999999999999998877543
No 133
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.38 E-value=0.00025 Score=63.82 Aligned_cols=56 Identities=5% Similarity=0.009 Sum_probs=46.7
Q ss_pred EEEcCCCc--CCccccCccEEEEEEeCEEEEEEEeCCe---EEEecCCcEEEECCCCcEEEEEc
Q 021698 218 VRFKAGSV--EPAHHHTFGHDLVVLEGKKSVWNLTKGE---RFDLTVGDYLFTPAGDVHRVKYY 276 (309)
Q Consensus 218 v~l~pG~~--~p~H~H~~~e~vyVl~G~l~v~~~~~~~---~~~L~pGd~i~iP~g~~H~~~n~ 276 (309)
+.+..... .+.|+|..-+++||++|+++ . ++++ .+.+.+||.+++|||.+|.+...
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~i~~v~~G~~~-~--i~~~~~~~~~l~~g~l~~i~p~~~h~~~~~ 72 (276)
T 3gbg_A 12 YRMSKFDTYIFNNLYINDYKMFWIDSGIAK-L--IDKNCLVSYEINSSSIILLKKNSIQRFSLT 72 (276)
T ss_dssp EEECTTCEEEEEEEECSSCEEEEESSSCEE-E--EETTTTEEEEECTTEEEEECTTCEEEEEEE
T ss_pred hhhhcccchhccHhhhcceEEEEEecCceE-E--ECCccceeEEEcCCCEEEEcCCCceeeccc
Confidence 44444433 36799999999999999998 5 4677 99999999999999999999876
No 134
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=97.22 E-value=0.0013 Score=57.83 Aligned_cols=62 Identities=19% Similarity=0.184 Sum_probs=51.3
Q ss_pred EEEEEcCCCcCCccccCc-cEEEEEEeCEEEEEEEe--C--------CeEEEecCCcEEEE-CCCCcEEEEEcC
Q 021698 216 AIVRFKAGSVEPAHHHTF-GHDLVVLEGKKSVWNLT--K--------GERFDLTVGDYLFT-PAGDVHRVKYYE 277 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~-~e~vyVl~G~l~v~~~~--~--------~~~~~L~pGd~i~i-P~g~~H~~~n~~ 277 (309)
.++...||..+|.|-|.. .-++.||+|+++.+.+. + .....+.+|+..|+ |++-.|++.|.+
T Consensus 73 ~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s 146 (200)
T 3eln_A 73 MILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVS 146 (200)
T ss_dssp EEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCC
T ss_pred EEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCC
Confidence 467889999999999994 67789999999874221 1 13688999999999 888899999998
No 135
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=97.21 E-value=0.0023 Score=58.31 Aligned_cols=69 Identities=14% Similarity=0.174 Sum_probs=55.2
Q ss_pred EEEcCCCcCCccccCccEEE-EEEeCEEEEEEEeCCeEEEecCCcEEEECC--CCcEEEEEcCC---eEEEEEEcC
Q 021698 218 VRFKAGSVEPAHHHTFGHDL-VVLEGKKSVWNLTKGERFDLTVGDYLFTPA--GDVHRVKYYEE---TEFFIKWDG 287 (309)
Q Consensus 218 v~l~pG~~~p~H~H~~~e~v-yVl~G~l~v~~~~~~~~~~L~pGd~i~iP~--g~~H~~~n~~d---~~~~i~~~g 287 (309)
.++.||...++|.|+..|.+ ||++|+++.+ ..-+...+++|||+-|+.+ |+.|+-.|..+ ..++-+|..
T Consensus 69 ~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~-DS~Gn~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQlWi~ 143 (256)
T 2vec_A 69 EVLAPGAAFQPRTYPKVDILNVILDGEAEYR-DSEGNHVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLD 143 (256)
T ss_dssp EEECTTCEEEEECCSSEEEEEEEEESEEEEE-ETTSCEEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEEEEEE
T ss_pred cccCCCCccCCcCCCCcEEEEEEEeeEEEEE-eCCCCEEEECCCeEEEEECCCCeEEEEEECCCCceEEEEEEEEe
Confidence 57889998999999998865 9999999985 4457889999999999965 57999999753 345555543
No 136
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=97.06 E-value=0.0037 Score=55.29 Aligned_cols=64 Identities=22% Similarity=0.267 Sum_probs=52.1
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe---CC------eEEEecCCcEEEECCC--CcEEEEEcC-Ce
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT---KG------ERFDLTVGDYLFTPAG--DVHRVKYYE-ET 279 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~---~~------~~~~L~pGd~i~iP~g--~~H~~~n~~-d~ 279 (309)
.++...||..+|.|-|...-++.|++|+++-+.+. ++ +...+.+|+..+++++ ..|++.|.+ +.
T Consensus 76 ~~l~W~PGq~spiHDH~swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d~ 151 (211)
T 3uss_A 76 VSFVWGPGQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDR 151 (211)
T ss_dssp EEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSS
T ss_pred EEEEECCCCcCCCCCCCeeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCCC
Confidence 46788999999999999777888999998874221 22 2478999999999998 899999985 44
No 137
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=97.00 E-value=0.0044 Score=53.22 Aligned_cols=68 Identities=15% Similarity=-0.021 Sum_probs=50.7
Q ss_pred EEEcCCCcCCccccC-ccEEEEEEeCEEEEEEEeCC----------eEEEec---CCcEEEECCCCcEEEEEcCC--eEE
Q 021698 218 VRFKAGSVEPAHHHT-FGHDLVVLEGKKSVWNLTKG----------ERFDLT---VGDYLFTPAGDVHRVKYYEE--TEF 281 (309)
Q Consensus 218 v~l~pG~~~p~H~H~-~~e~vyVl~G~l~v~~~~~~----------~~~~L~---pGd~i~iP~g~~H~~~n~~d--~~~ 281 (309)
....+|....+|.|. ..++++|++|++...+ ++. ..+.|. +...+|||+|..|.+.+.++ +.+
T Consensus 58 s~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~-vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~ 136 (174)
T 3ejk_A 58 SEVLPRRVKAWKRHSLMTQLFAVPVGCIHVVL-YDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALV 136 (174)
T ss_dssp EEECBTCEEEEEEESSCCEEEEEEESEEEEEE-ECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEE
T ss_pred EECCCCCEECcEecCCCceEEEEEeeEEEEEE-EeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEE
Confidence 344678888999996 6788999999999852 332 356777 55799999999999999987 344
Q ss_pred EEEEc
Q 021698 282 FIKWD 286 (309)
Q Consensus 282 ~i~~~ 286 (309)
++..+
T Consensus 137 ly~~s 141 (174)
T 3ejk_A 137 ANCTD 141 (174)
T ss_dssp EEEES
T ss_pred EEECC
Confidence 44433
No 138
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=96.99 E-value=0.007 Score=54.48 Aligned_cols=63 Identities=14% Similarity=0.187 Sum_probs=48.9
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETE 280 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~ 280 (309)
.+....||...++ .|...|+.|||+|+++++ ..+++.+.+++||+++||+|..=.+...+...
T Consensus 170 GiW~~tpG~~~~~-~~~~~E~~~ILeG~v~lt-~~~G~~~~~~aGD~~~~P~G~~~tWev~e~vr 232 (238)
T 3myx_A 170 GVWDSTPYERISR-PHKIHELMNLIEGRVVLS-LENGSSLTVNTGDTVFVAQGAPCKWTSTGYVR 232 (238)
T ss_dssp EEEEECCEEBCCE-ECSSCEEEEEEECCEEEE-ETTSCEEEECTTCEEEECTTCEEEEEESSCEE
T ss_pred eEEEeCCCEEECC-cCCCCEEEEEEEeEEEEE-eCCCCEEEECCCCEEEECCCCEEEEEECccEE
Confidence 4566677764443 245679999999999995 34677899999999999999998887776543
No 139
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=96.93 E-value=0.0033 Score=56.34 Aligned_cols=80 Identities=23% Similarity=0.378 Sum_probs=54.5
Q ss_pred EEEEEcCCCcCCccccCcc-EEEEEEeC---EEEEEEE--------------eC--------CeEEEecCCcEEEECCCC
Q 021698 216 AIVRFKAGSVEPAHHHTFG-HDLVVLEG---KKSVWNL--------------TK--------GERFDLTVGDYLFTPAGD 269 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~-e~vyVl~G---~l~v~~~--------------~~--------~~~~~L~pGd~i~iP~g~ 269 (309)
.++.+.+|+..|.|.|+.. |-+...-| .+++++. .+ +....|.||+++.++||+
T Consensus 109 K~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~Pg~ 188 (246)
T 3kmh_A 109 KIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICLPPGL 188 (246)
T ss_dssp EEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEECTTE
T ss_pred eEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEecCCCC
Confidence 3577889999999999864 55666666 4444321 11 234588999999999999
Q ss_pred cEEEEEcCCe-EEE-----EEEcCCcc-cccch
Q 021698 270 VHRVKYYEET-EFF-----IKWDGRWD-MFFDE 295 (309)
Q Consensus 270 ~H~~~n~~d~-~~~-----i~~~g~~~-i~~~~ 295 (309)
.|+|+..++. .++ .+.+..-| +|++|
T Consensus 189 ~H~F~ae~g~G~vligEVSt~NDD~~DN~F~~p 221 (246)
T 3kmh_A 189 YHSFWAEAGFGDVLVGEVSSVNDDDHDNHFLQP 221 (246)
T ss_dssp EEEEEECTTSCCEEEEEEEECCCTTTSEEESSC
T ss_pred EEEEEecCCCccEEEEEcccCcCCCCCccccCC
Confidence 9999998762 222 23334444 77766
No 140
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=96.93 E-value=0.0038 Score=57.30 Aligned_cols=47 Identities=26% Similarity=0.218 Sum_probs=43.3
Q ss_pred cEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEE
Q 021698 234 GHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 234 ~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~ 282 (309)
+-|+++|+|+..| .++++++.|++||++.||+++.|.+....++.++
T Consensus 227 d~wiWqLEGss~V--t~~~q~~~L~~~DsLLIpa~~~y~~~r~~gsv~L 273 (286)
T 2qnk_A 227 DVWLWQLEGSSVV--TMGGRRLSLAPDDSLLVLAGTSYAWERTQGSVAL 273 (286)
T ss_dssp CEEEEEEESCEEE--EETTEEEEECTTEEEEECTTCCEEEEECTTCEEE
T ss_pred cEEEEEEcCceEE--EECCeEEeccCCCEEEecCCCeEEEEecCCeEEE
Confidence 7789999999998 7899999999999999999999999988877765
No 141
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=96.81 E-value=0.0042 Score=56.00 Aligned_cols=68 Identities=21% Similarity=0.195 Sum_probs=54.3
Q ss_pred EEEcCCCcCCccccCccEE-EEEEeCEEEEEEEeCCeEEEecCCcEEEECC--CCcEEEEEcCC---eEEEEEEc
Q 021698 218 VRFKAGSVEPAHHHTFGHD-LVVLEGKKSVWNLTKGERFDLTVGDYLFTPA--GDVHRVKYYEE---TEFFIKWD 286 (309)
Q Consensus 218 v~l~pG~~~p~H~H~~~e~-vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~--g~~H~~~n~~d---~~~~i~~~ 286 (309)
.++.||...++|.|+..|. .||++|+++-+ ..-+...+++|||.-|+.+ |+.|+-.|..+ ..++-+|.
T Consensus 46 d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~-DS~Gn~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQlWv 119 (242)
T 1tq5_A 46 DVIEAGQGFGTHPHKDMEILTYVLEGTVEHQ-DSMGNKEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQIWI 119 (242)
T ss_dssp EEECTTCEEEEEEECSCEEEEEEEESEEEEE-ESSSCEEEEETTCEEEEECTTCEEEEEECCCSSCCEEEEEEEE
T ss_pred ceeCCCCcCCCcCCCCcEEEEEEEEeEEEEE-eCCCCcEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEEEE
Confidence 4778998899999999886 49999999985 4457889999999999955 58999988653 34555554
No 142
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=96.74 E-value=0.0052 Score=53.43 Aligned_cols=62 Identities=23% Similarity=0.257 Sum_probs=46.6
Q ss_pred cCCCcCCccccCccEEEEEEeCEEEEEEEeC-------------------------------------CeEEEecCCcEE
Q 021698 221 KAGSVEPAHHHTFGHDLVVLEGKKSVWNLTK-------------------------------------GERFDLTVGDYL 263 (309)
Q Consensus 221 ~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~-------------------------------------~~~~~L~pGd~i 263 (309)
++|+..+.|.....-+..++.|+-++.+.-. .-..+|+|||.+
T Consensus 132 ~~gs~t~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~L 211 (235)
T 4gjz_A 132 PQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEIL 211 (235)
T ss_dssp CTTCEEEEECCSSEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEECTTCEE
T ss_pred CCCCCceeeeccccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEECCCCEE
Confidence 4456667777777777788999888753211 125689999999
Q ss_pred EECCCCcEEEEEcCCeEEE
Q 021698 264 FTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 264 ~iP~g~~H~~~n~~d~~~~ 282 (309)
|||+|-.|.+.|.+++..+
T Consensus 212 yiP~gW~H~V~~l~~sisv 230 (235)
T 4gjz_A 212 FIPVKYWHYVRALDLSFSV 230 (235)
T ss_dssp EECTTCEEEEEESSSEEEE
T ss_pred EeCCCCcEEEEECCCEEEE
Confidence 9999999999999876544
No 143
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=96.41 E-value=0.014 Score=51.16 Aligned_cols=65 Identities=11% Similarity=0.185 Sum_probs=50.4
Q ss_pred cCCCcCCccccCccEEEEEEe-CEE-EEEEEeCC---------eEEEecCCcEEEECCCCcEEEEEcCCe-EEEEEEcC
Q 021698 221 KAGSVEPAHHHTFGHDLVVLE-GKK-SVWNLTKG---------ERFDLTVGDYLFTPAGDVHRVKYYEET-EFFIKWDG 287 (309)
Q Consensus 221 ~pG~~~p~H~H~~~e~vyVl~-G~l-~v~~~~~~---------~~~~L~pGd~i~iP~g~~H~~~n~~d~-~~~i~~~g 287 (309)
.+|....+|.|.+.++++|++ |++ .+ .++. ....|..+..+|||+|..|.+.+.++. .+.+..+.
T Consensus 68 ~~GvlRGlH~h~q~Klv~~~~~G~v~dV--~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~a~~~y~~s~ 144 (197)
T 1nxm_A 68 RKNVLRGLHAEPWDKYISVADGGKVLGT--WVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDFVAYSYLVND 144 (197)
T ss_dssp ETTBEEEEEECSSCEEEEECSSCCEEEE--EEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSEEEEEEEESS
T ss_pred CCCCcceeeecccceEEEEcCCCEEEEE--EEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCCeEEEEECCC
Confidence 567777899999999999999 995 44 3333 346788899999999999999999864 44444433
No 144
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=96.36 E-value=0.023 Score=53.53 Aligned_cols=57 Identities=25% Similarity=0.320 Sum_probs=45.7
Q ss_pred CCCcCCccccCccEEEEEEeCEEEEEEE-e------------------------------------CCeEEEecCCcEEE
Q 021698 222 AGSVEPAHHHTFGHDLVVLEGKKSVWNL-T------------------------------------KGERFDLTVGDYLF 264 (309)
Q Consensus 222 pG~~~p~H~H~~~e~vyVl~G~l~v~~~-~------------------------------------~~~~~~L~pGd~i~ 264 (309)
.|+..++|.....-+++.+.|+-++++. - .....+|.|||.+|
T Consensus 150 ~g~~~~~H~D~~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~pGD~Ly 229 (342)
T 1vrb_A 150 NGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLY 229 (342)
T ss_dssp SSCCCCSEECSSEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEECTTCEEE
T ss_pred CCCCCCCeECChhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEECCCcEEE
Confidence 3777788988888888889998887644 1 02457999999999
Q ss_pred ECCCCcEEEEEcCC
Q 021698 265 TPAGDVHRVKYYEE 278 (309)
Q Consensus 265 iP~g~~H~~~n~~d 278 (309)
||+|-+|.+.+.++
T Consensus 230 iP~gwwH~v~s~~~ 243 (342)
T 1vrb_A 230 LPRGLWHSTKSDQA 243 (342)
T ss_dssp ECTTCEEEEECSSC
T ss_pred eCCCccEEEEECCC
Confidence 99999999999853
No 145
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=96.04 E-value=0.034 Score=50.54 Aligned_cols=80 Identities=21% Similarity=0.271 Sum_probs=57.0
Q ss_pred ceEEEeeeCC---CeEEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEE-EEEcC--
Q 021698 204 GSMKIIRESP---TSAIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHR-VKYYE-- 277 (309)
Q Consensus 204 g~~~il~~~~---~~~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~-~~n~~-- 277 (309)
++.++|.-.. .+..+.++|+...|.-.|...-++|||+|++.+ ++ +.|.++.+.++|+|+.-. ++..+
T Consensus 79 gs~RlLs~~d~GaSTl~V~fpp~~~~P~Gi~~ad~E~fVL~G~i~~----G~--~~l~~h~Y~f~PaGV~~~~~kv~~~~ 152 (303)
T 2qdr_A 79 GSRRLLTWHDSGASTSRVVLPPKFEAPSGIFTADLEIFVIKGAIQL----GE--WQLNKHSYSFIPAGVRIGSWKVLGGE 152 (303)
T ss_dssp EEEEEEEECTTSCEEEEEEECTTCEECCBEESSCEEEEEEESEEEE----TT--EEECTTEEEEECTTCCBCCEEEETTS
T ss_pred cceeecccCCCCcceEEEEecCCCCCCCcccccceEEEEEEeEEEe----CC--EEecCCceEEecCCCccCceeecCCC
Confidence 4556654321 147889999999888777776669999999998 33 778999999999999764 44434
Q ss_pred CeEEEEEEcCCc
Q 021698 278 ETEFFIKWDGRW 289 (309)
Q Consensus 278 d~~~~i~~~g~~ 289 (309)
..++++.-.|.+
T Consensus 153 g~~iL~fe~g~~ 164 (303)
T 2qdr_A 153 EAEILWMENGSV 164 (303)
T ss_dssp CEEEEEEECSSS
T ss_pred CcEEEEEecCCc
Confidence 344444445555
No 146
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=95.95 E-value=0.016 Score=47.20 Aligned_cols=62 Identities=16% Similarity=0.218 Sum_probs=44.5
Q ss_pred CCCcCCcc---c-cCc-cEEEEEEeCEEEEEEEeC------CeEEEecCCcEEEECCCCcEEEEEcC-CeEEEE
Q 021698 222 AGSVEPAH---H-HTF-GHDLVVLEGKKSVWNLTK------GERFDLTVGDYLFTPAGDVHRVKYYE-ETEFFI 283 (309)
Q Consensus 222 pG~~~p~H---~-H~~-~e~vyVl~G~l~v~~~~~------~~~~~L~pGd~i~iP~g~~H~~~n~~-d~~~~i 283 (309)
|++..+.| . |.. ...+.|++|++++....+ ++....++|+..++||+.+|++...+ |..+.|
T Consensus 23 P~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsdd~~f~l 96 (127)
T 3bb6_A 23 PAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNI 96 (127)
T ss_dssp CGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESSTTCEEEE
T ss_pred hHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCCCEEEEE
Confidence 44555667 3 543 355679999999853222 35567899999999999999999854 666653
No 147
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=95.93 E-value=0.04 Score=51.68 Aligned_cols=83 Identities=28% Similarity=0.252 Sum_probs=56.5
Q ss_pred cCCCcCCccccCccEEEEEEeCEEEEEEEeC---------------------------------CeEEEecCCcEEEECC
Q 021698 221 KAGSVEPAHHHTFGHDLVVLEGKKSVWNLTK---------------------------------GERFDLTVGDYLFTPA 267 (309)
Q Consensus 221 ~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~---------------------------------~~~~~L~pGd~i~iP~ 267 (309)
++|+..++|.....-++.++.|+-++++.-. ....+|.|||.+|||+
T Consensus 175 ~~g~~~~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD~LyiP~ 254 (338)
T 3al5_A 175 SPGLQLWTHYDVMDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIPA 254 (338)
T ss_dssp CTTCEEEEECCSSEEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTCEEEECT
T ss_pred CCCCCccceECCcccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCCEEEECC
Confidence 4556667787777777778888877643210 2468899999999999
Q ss_pred CCcEEEEEcCCeEEE-EEEcCC-------cccccchhHHHHHHH
Q 021698 268 GDVHRVKYYEETEFF-IKWDGR-------WDMFFDEDLETAKKA 303 (309)
Q Consensus 268 g~~H~~~n~~d~~~~-i~~~g~-------~~i~~~~~~~~a~~~ 303 (309)
|-.|.+.+.+++..+ +.|... .++|-++|+..++++
T Consensus 255 gWwH~v~~l~~sisvn~~~~~~~~~~~~~~~~y~~~dl~~~~~~ 298 (338)
T 3al5_A 255 LWFHNVISEEFGVGVNIFWKHLPSECYDKTDTYGNKDPTAASRA 298 (338)
T ss_dssp TCEEEEEESSCEEEEEEEECSSCGGGSCTTCSSSCSCCHHHHHH
T ss_pred CCeEEEeeCCCEEEEEEEecCCccccCCcccccccCCchHHHHH
Confidence 999999999866544 345432 244555666555443
No 148
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=95.90 E-value=0.03 Score=48.45 Aligned_cols=65 Identities=17% Similarity=0.118 Sum_probs=46.0
Q ss_pred cCCCcCCcccc---CccEEEEEEeCEEE-EEEEeCC--------eEEEecC--CcEEEECCCCcEEEEEcCCeEEEEEE
Q 021698 221 KAGSVEPAHHH---TFGHDLVVLEGKKS-VWNLTKG--------ERFDLTV--GDYLFTPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 221 ~pG~~~p~H~H---~~~e~vyVl~G~l~-v~~~~~~--------~~~~L~p--Gd~i~iP~g~~H~~~n~~d~~~~i~~ 285 (309)
.+|....+|.| ...++++|++|++. +.+.+.. ..+.|.+ +..+|||+|..|.+.+.++...++.+
T Consensus 56 ~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~ 134 (185)
T 1ep0_A 56 VRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDECIVNYK 134 (185)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEE
T ss_pred cCCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEEe
Confidence 46777789988 67889999999964 4212111 2245554 57899999999999999975444433
No 149
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=95.83 E-value=0.035 Score=48.80 Aligned_cols=62 Identities=16% Similarity=0.225 Sum_probs=46.1
Q ss_pred cCCCcCCccccC----ccEEEEEEeCEEEEEEEeC----C------eEEEecC--CcEEEECCCCcEEEEEcCCeEEEE
Q 021698 221 KAGSVEPAHHHT----FGHDLVVLEGKKSVWNLTK----G------ERFDLTV--GDYLFTPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 221 ~pG~~~p~H~H~----~~e~vyVl~G~l~v~~~~~----~------~~~~L~p--Gd~i~iP~g~~H~~~n~~d~~~~i 283 (309)
.+|....+|.|. +.++++|++|++.-. .++ . ..+.|.+ +..+|||+|..|.+.+.++...++
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV-~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~a~~~ 155 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDV-IVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPHTIVM 155 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEE-EEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSSEEEE
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEE-EEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCCEEEE
Confidence 577778899884 688999999996432 232 1 3456765 689999999999999998654443
No 150
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=95.81 E-value=0.033 Score=48.16 Aligned_cols=63 Identities=19% Similarity=0.156 Sum_probs=45.9
Q ss_pred cCCCcCCcccc---CccEEEEEEeCEEE-EEEEeCC--------e--EEEecC--CcEEEECCCCcEEEEEcCCeEEEEE
Q 021698 221 KAGSVEPAHHH---TFGHDLVVLEGKKS-VWNLTKG--------E--RFDLTV--GDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 221 ~pG~~~p~H~H---~~~e~vyVl~G~l~-v~~~~~~--------~--~~~L~p--Gd~i~iP~g~~H~~~n~~d~~~~i~ 284 (309)
.+|....+|.| .+.++++|++|++. + .++. + ...|.+ +..+|||+|..|.+.+.++...++.
T Consensus 57 ~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV--~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y 134 (184)
T 2ixk_A 57 ARGVLRGLHYQIRQAQGKLVRATLGEVFDV--AVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFLY 134 (184)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEE--EEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEE
T ss_pred CCCceeeEEeCCCCCcCEEEEEeCCeEEEE--EEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCCEEEEE
Confidence 46777789988 57789999999964 4 2222 2 245554 5789999999999999997544443
Q ss_pred E
Q 021698 285 W 285 (309)
Q Consensus 285 ~ 285 (309)
+
T Consensus 135 ~ 135 (184)
T 2ixk_A 135 K 135 (184)
T ss_dssp E
T ss_pred e
Confidence 3
No 151
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=95.48 E-value=0.036 Score=48.39 Aligned_cols=64 Identities=19% Similarity=0.192 Sum_probs=46.7
Q ss_pred cCCCcCCccccC----ccEEEEEEeCEEEEEEEeCC----------eEEEecC--CcEEEECCCCcEEEEEcCCeEEEEE
Q 021698 221 KAGSVEPAHHHT----FGHDLVVLEGKKSVWNLTKG----------ERFDLTV--GDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 221 ~pG~~~p~H~H~----~~e~vyVl~G~l~v~~~~~~----------~~~~L~p--Gd~i~iP~g~~H~~~n~~d~~~~i~ 284 (309)
.+|....+|.|. ..++++|++|++... .++. ..+.|.+ +..+|||+|..|.+.+.++...++.
T Consensus 73 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV-~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~a~~ly 151 (196)
T 1wlt_A 73 RKGVVRGLHYQRTPKEQGKIIFVPKGRILDV-AVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDSIVIYF 151 (196)
T ss_dssp CTTBEEEEEEECTTSCCEEEEEEEESEEEEE-EEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSEEEEEE
T ss_pred CCCcceeEEccCCCCCCceEEEEeCCEEEEE-EEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEE
Confidence 467777899886 578999999998431 2322 2346664 6899999999999999997555444
Q ss_pred E
Q 021698 285 W 285 (309)
Q Consensus 285 ~ 285 (309)
+
T Consensus 152 ~ 152 (196)
T 1wlt_A 152 I 152 (196)
T ss_dssp E
T ss_pred E
Confidence 4
No 152
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=95.47 E-value=0.062 Score=49.23 Aligned_cols=68 Identities=19% Similarity=0.186 Sum_probs=54.3
Q ss_pred EEcCCCcCCccccCccEEE-EEEeCEEEEEEEeCCeEEEecCCcEEEECCC--CcEEEEEcCC--eEEEEEEcC
Q 021698 219 RFKAGSVEPAHHHTFGHDL-VVLEGKKSVWNLTKGERFDLTVGDYLFTPAG--DVHRVKYYEE--TEFFIKWDG 287 (309)
Q Consensus 219 ~l~pG~~~p~H~H~~~e~v-yVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g--~~H~~~n~~d--~~~~i~~~g 287 (309)
...++...++|.|+..|.+ ||++|+++-+ ..-+..-.+.|||.-|+-+| +.|+-.|..+ ..++-+|..
T Consensus 45 ~~~~~~gf~~HPHrg~EtVTyvl~G~~~H~-DS~Gn~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlWvn 117 (277)
T 2p17_A 45 DIFERGTFDVHPHRGIETVTYVISGELEHF-DSKAGHSTLGPGDVQWMTAGRGVVHKEDPASGSTVHSLQLWVN 117 (277)
T ss_dssp EEECTTCCCCEEECSEEEEEEEEESCEEEE-ETTTEEEEECTTCEEEEECTTCEEEEEEECTTCCEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCcEEEEEEEEeEEEEe-eCCCCceEECCCeEEEEeCCCCEEEEeecCCCCCEEEEEEEee
Confidence 4467778899999998865 9999999985 55678889999999999986 6899888754 345556653
No 153
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=95.41 E-value=0.2 Score=42.69 Aligned_cols=62 Identities=19% Similarity=0.320 Sum_probs=47.4
Q ss_pred eEEEEEcCCCcCCccccCccEEEEEEeCE-EEEEEEe-CCeEEE------ecCCcE--EEECCCCcEEEEEc
Q 021698 215 SAIVRFKAGSVEPAHHHTFGHDLVVLEGK-KSVWNLT-KGERFD------LTVGDY--LFTPAGDVHRVKYY 276 (309)
Q Consensus 215 ~~~v~l~pG~~~p~H~H~~~e~vyVl~G~-l~v~~~~-~~~~~~------L~pGd~--i~iP~g~~H~~~n~ 276 (309)
+.++-+.+|..+.+|+....|+.+...|. +++.+.. +++... +..|+. ++||+|+++..++.
T Consensus 51 ~IYfLL~~g~~S~~HRv~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~Ge~pQ~vVP~G~wqaa~~~ 122 (170)
T 1yud_A 51 SIYFLLRTGEVSHFHRLTADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAGERPQFLVPKGCIFGSAMN 122 (170)
T ss_dssp EEEEEEETTCCEEEEECSSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTTEESCEEECTTCEEEEEES
T ss_pred EEEEEECCCCCCeeEEcCCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccCceeEEEECCCCEEEEEEC
Confidence 36788899998888888888888889996 4664222 444443 567888 99999999999988
No 154
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=95.38 E-value=0.017 Score=43.08 Aligned_cols=33 Identities=21% Similarity=0.201 Sum_probs=28.6
Q ss_pred EEEEEcCCCcCCccccCcc-EEEEEEeCEEEEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFG-HDLVVLEGKKSVWN 248 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~-e~vyVl~G~l~v~~ 248 (309)
..+.+.+|+..++|||+.. |++||++|++.+++
T Consensus 39 ~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~ 72 (79)
T 1dgw_X 39 NCLQMNEGALFVPHYNSRATVILVANEGRAEVEL 72 (79)
T ss_dssp EEEEECTTCEEEEEEESSCEEEEEEEESCEEEEE
T ss_pred EEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEE
Confidence 5678999999999999865 77899999999963
No 155
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=95.21 E-value=0.14 Score=44.14 Aligned_cols=64 Identities=20% Similarity=0.200 Sum_probs=45.1
Q ss_pred cCCCcCCcccc----CccEEEEEEeCEEE-EEEEeC------C--eEEEecC--CcEEEECCCCcEEEEEcCCeEEEEE
Q 021698 221 KAGSVEPAHHH----TFGHDLVVLEGKKS-VWNLTK------G--ERFDLTV--GDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 221 ~pG~~~p~H~H----~~~e~vyVl~G~l~-v~~~~~------~--~~~~L~p--Gd~i~iP~g~~H~~~n~~d~~~~i~ 284 (309)
.+|....+|.| ...++++|++|++. +.+... + ..+.|.+ +..+|||+|..|.+.+.++...++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y 133 (183)
T 1dzr_A 55 KKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEYAEFLY 133 (183)
T ss_dssp ETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEE
T ss_pred CCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEE
Confidence 46777789988 56789999999964 421111 1 2245554 5789999999999999997554443
No 156
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=95.13 E-value=0.18 Score=44.21 Aligned_cols=62 Identities=16% Similarity=0.146 Sum_probs=44.8
Q ss_pred cCCCcCCccccC----ccEEEEEEeCEEEEEEEeCC----------eEEEecC--CcEEEECCCCcEEEEEcCCeEEEE
Q 021698 221 KAGSVEPAHHHT----FGHDLVVLEGKKSVWNLTKG----------ERFDLTV--GDYLFTPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 221 ~pG~~~p~H~H~----~~e~vyVl~G~l~v~~~~~~----------~~~~L~p--Gd~i~iP~g~~H~~~n~~d~~~~i 283 (309)
.+|....+|.|. +.++++|++|++... .++. ..+.|.+ +..+|||+|..|.+.+.++...++
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV-~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~ 132 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDI-VIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDDTVMS 132 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEE-EECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTTEEEE
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEE-EEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCCeEEE
Confidence 467777899885 588999999996421 3332 2356665 478999999999999998644433
No 157
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=95.00 E-value=0.22 Score=44.34 Aligned_cols=62 Identities=13% Similarity=0.148 Sum_probs=45.3
Q ss_pred cCCCcCCccccC----ccEEEEEEeCEEE-EEEEeCC----------eEEEecC--CcEEEECCCCcEEEEEcCCeEEEE
Q 021698 221 KAGSVEPAHHHT----FGHDLVVLEGKKS-VWNLTKG----------ERFDLTV--GDYLFTPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 221 ~pG~~~p~H~H~----~~e~vyVl~G~l~-v~~~~~~----------~~~~L~p--Gd~i~iP~g~~H~~~n~~d~~~~i 283 (309)
.+|....+|.|. +.++++|++|++. + .++. ..+.|.+ ...+|||+|..|.+.+.++...++
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV--~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a~vl 151 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDV--VVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVM 151 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEE--EECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSSEEEE
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEE--EEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCCEEEE
Confidence 467777899885 5889999999974 4 3332 2245555 478999999999999998654443
Q ss_pred E
Q 021698 284 K 284 (309)
Q Consensus 284 ~ 284 (309)
.
T Consensus 152 y 152 (225)
T 1upi_A 152 Y 152 (225)
T ss_dssp E
T ss_pred E
Confidence 3
No 158
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=94.98 E-value=0.14 Score=49.99 Aligned_cols=57 Identities=30% Similarity=0.401 Sum_probs=44.6
Q ss_pred cCCCcC-CccccCccEEEEEEeCEEEEEEEeC-------------------CeEEEecCCcEEEECCCCcEEEEEcC
Q 021698 221 KAGSVE-PAHHHTFGHDLVVLEGKKSVWNLTK-------------------GERFDLTVGDYLFTPAGDVHRVKYYE 277 (309)
Q Consensus 221 ~pG~~~-p~H~H~~~e~vyVl~G~l~v~~~~~-------------------~~~~~L~pGd~i~iP~g~~H~~~n~~ 277 (309)
++|+.. ++|+....-+++.+.|+-++++... ....+|.|||.+|||+|.+|..++.+
T Consensus 147 ~~g~~g~~~H~D~~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~ 223 (442)
T 2xdv_A 147 PAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADTPA 223 (442)
T ss_dssp CTTCBCSCSEECSSEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEECCS
T ss_pred CCCCCCccceECCcceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEecC
Confidence 445443 7898888888889999888753222 13689999999999999999999875
No 159
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=94.91 E-value=0.13 Score=45.45 Aligned_cols=63 Identities=13% Similarity=0.026 Sum_probs=45.5
Q ss_pred cCCCcCCccccC----ccEEEEEEeCEEEEEEEeCC----------eEEEecC--CcEEEECCCCcEEEEEcCCeEEEEE
Q 021698 221 KAGSVEPAHHHT----FGHDLVVLEGKKSVWNLTKG----------ERFDLTV--GDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 221 ~pG~~~p~H~H~----~~e~vyVl~G~l~v~~~~~~----------~~~~L~p--Gd~i~iP~g~~H~~~n~~d~~~~i~ 284 (309)
.+|....+|.|. +.++++|++|++... .++. ..+.|.+ +..+|||+|..|.+.+.++...++.
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV-~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a~~ly 141 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDV-VVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDEATLCY 141 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEE-EEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEE-EEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCCeEEEE
Confidence 467777899886 588999999996421 2222 2245555 4789999999999999997554443
No 160
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=94.86 E-value=0.087 Score=42.35 Aligned_cols=52 Identities=17% Similarity=0.380 Sum_probs=40.3
Q ss_pred CccEE--EEEEeCEEEEEEEeC------CeEEEecCCcEEEECCCCcEEEEEcCCeEEEE
Q 021698 232 TFGHD--LVVLEGKKSVWNLTK------GERFDLTVGDYLFTPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 232 ~~~e~--vyVl~G~l~v~~~~~------~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i 283 (309)
..+.| +-|++|++++....+ .+...+.+|+..+|||..+|++...+|..+.|
T Consensus 35 K~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sdD~~f~l 94 (119)
T 3dl3_A 35 AVDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSDDAQFNI 94 (119)
T ss_dssp CTTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECTTCEEEE
T ss_pred CCcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECCCeEEEE
Confidence 34455 469999999953221 35678999999999999999999667888864
No 161
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=94.43 E-value=0.1 Score=48.10 Aligned_cols=68 Identities=19% Similarity=0.115 Sum_probs=54.5
Q ss_pred EEEcCCCcCCccccCccEEE-EEE-eCEEEEEEEeCCeEEEecCCcEEEECCC--CcEEEEEcCC--eEEEEEEc
Q 021698 218 VRFKAGSVEPAHHHTFGHDL-VVL-EGKKSVWNLTKGERFDLTVGDYLFTPAG--DVHRVKYYEE--TEFFIKWD 286 (309)
Q Consensus 218 v~l~pG~~~p~H~H~~~e~v-yVl-~G~l~v~~~~~~~~~~L~pGd~i~iP~g--~~H~~~n~~d--~~~~i~~~ 286 (309)
..+.++...++|.|+..|.+ ||+ +|+++-+ ..-+..-.+.|||.-|+-+| +.|+-.|..+ ..++-+|.
T Consensus 45 ~~~~~~~Gf~~HPHrg~EtVTyvl~~G~~~H~-DS~Gn~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlWv 118 (290)
T 1j1l_A 45 FKGGRPGGFPDHPHRGFETVSYLLEGGSMAHE-DFCGHTGKMNPGDLQWMTAGRGILHAEMPCSEEPAHGLQLWV 118 (290)
T ss_dssp EEECTTCBEEEEEEBSEEEEEEECSSSCEEEE-ETTSCEEEECTTCEEEEECTTCEEEEEEECSSSCEEEEEEEE
T ss_pred cccCCCCCCCCCCCCCeEEEEEECcceEEEEe-eCCCCceEECCCcEEEEeCCCCEEEEeEcCCCCCEEEEEEEe
Confidence 46778877899999998865 999 9999986 55677889999999999976 6799888653 45555665
No 162
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=94.34 E-value=0.17 Score=45.98 Aligned_cols=72 Identities=15% Similarity=0.106 Sum_probs=55.4
Q ss_pred eEEEeeeCCC---eEEEEEcCCCcC-CccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEE--------
Q 021698 205 SMKIIRESPT---SAIVRFKAGSVE-PAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHR-------- 272 (309)
Q Consensus 205 ~~~il~~~~~---~~~v~l~pG~~~-p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~-------- 272 (309)
..++|+.++. ..++++.||... ..-.|+..|++|+|+|.+. .|++.+-|++++|.
T Consensus 206 ~~K~Lr~D~~G~~TrLlr~~Pg~dt~~v~iHdy~EEvY~LeG~~d-------------~G~Y~~RPpg~~HGps~~~~pp 272 (303)
T 2qdr_A 206 NKKWLRKDINGGGVWLLAILPHFDNKYQMIQPYNEEGYCLTGYCD-------------VGDYRIVKDHYWYCPSFSTLPR 272 (303)
T ss_dssp EEEEEEECTTSCEEEEEEECSSEECCSEEEECSCEEEEEEEEEEE-------------ETTEEEETTEEEEECTTEEECC
T ss_pred HHHHhhcCCCCCeEEEEEECCCCCCCCceeeccceeEEEEeeecc-------------CceeeEcCCCCccCccccCCCC
Confidence 4567776654 367899999765 4567999999999999763 39999999999998
Q ss_pred EEEcCCeEEEEEEcCCc
Q 021698 273 VKYYEETEFFIKWDGRW 289 (309)
Q Consensus 273 ~~n~~d~~~~i~~~g~~ 289 (309)
+.....+.+++..++-.
T Consensus 273 f~Se~G~l~fvR~DgdL 289 (303)
T 2qdr_A 273 HITDDGGLFFVRVDRDL 289 (303)
T ss_dssp EEESSCEEEEEEESSCT
T ss_pred cCcCCceEEEEEeCccc
Confidence 45555677788887744
No 163
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=93.98 E-value=0.53 Score=41.14 Aligned_cols=65 Identities=9% Similarity=0.057 Sum_probs=47.1
Q ss_pred cCCCcCCccccC----ccEEEEEEeCEEEEEEEeCC----------eEEEecC--CcEEEECCCCcEEEEEcCC-eEEEE
Q 021698 221 KAGSVEPAHHHT----FGHDLVVLEGKKSVWNLTKG----------ERFDLTV--GDYLFTPAGDVHRVKYYEE-TEFFI 283 (309)
Q Consensus 221 ~pG~~~p~H~H~----~~e~vyVl~G~l~v~~~~~~----------~~~~L~p--Gd~i~iP~g~~H~~~n~~d-~~~~i 283 (309)
.+|....+|.|. +..++.|++|++.-. .+|- ....|.+ +..+|||+|..|.+.+.++ +.+.+
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV-~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~a~~~Y 130 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDV-VVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDDATLVF 130 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEE-EECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTTEEEEE
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEE-EEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCCeEEEE
Confidence 567777889874 688999999997542 3332 2345665 6799999999999999986 45544
Q ss_pred EEc
Q 021698 284 KWD 286 (309)
Q Consensus 284 ~~~ 286 (309)
..+
T Consensus 131 ~~t 133 (201)
T 4hn1_A 131 LCS 133 (201)
T ss_dssp EES
T ss_pred eCC
Confidence 443
No 164
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=93.72 E-value=0.28 Score=46.14 Aligned_cols=57 Identities=23% Similarity=0.239 Sum_probs=45.7
Q ss_pred cCCCcCCccccCccEEEEEEeCEEEEEEEe--------------------------------------CCeEEEecCCcE
Q 021698 221 KAGSVEPAHHHTFGHDLVVLEGKKSVWNLT--------------------------------------KGERFDLTVGDY 262 (309)
Q Consensus 221 ~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~--------------------------------------~~~~~~L~pGd~ 262 (309)
++|+..+.|..+..-+..++.|+-++++.- .....+|.|||.
T Consensus 191 ~~gs~t~~H~D~~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~ 270 (349)
T 3d8c_A 191 MEGNVTPAHYGEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDV 270 (349)
T ss_dssp CTTCEEEEECCSEEEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEECTTCE
T ss_pred CCCCCccceECChhcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEECCCCE
Confidence 566777889888877788899988875310 114589999999
Q ss_pred EEECCCCcEEEEEcC
Q 021698 263 LFTPAGDVHRVKYYE 277 (309)
Q Consensus 263 i~iP~g~~H~~~n~~ 277 (309)
+|||+|-.|.+.+.+
T Consensus 271 LyiP~gWwH~V~~l~ 285 (349)
T 3d8c_A 271 LYIPMYWWHHIESLL 285 (349)
T ss_dssp EEECTTCEEEEEECT
T ss_pred EEECCCCcEEEEEcC
Confidence 999999999999997
No 165
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=93.70 E-value=0.39 Score=43.81 Aligned_cols=70 Identities=16% Similarity=0.092 Sum_probs=54.7
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEe-cC---------CcEEEECCCCcEEEEEcCCeEEEEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDL-TV---------GDYLFTPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L-~p---------Gd~i~iP~g~~H~~~n~~d~~~~i~~ 285 (309)
.++++++|.......-..+-.++.|.|++++ .++++++.+ .. .+++|+|.|..=.+.+.++.++.+..
T Consensus 32 ~~~~L~~Ge~~~~~~~~~E~~iv~l~G~~~V--~~~g~~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~a~~~~~~~v~s 109 (270)
T 2qjv_A 32 DVWQLXAGESITLPSDERERCLVLVAGLASV--XAADSFFYRIGQRMSPFERIPAYSVYLPHHTEAXVTAETDLELAVCS 109 (270)
T ss_dssp EEEEECTTCEEEECCSSEEEEEEEEESCEEE--EETTEEEEEECCCSSGGGCSCCCEEEECSSCCEEEEESSSEEEEEEE
T ss_pred EEEEecCCCEEEecCCCcEEEEEEecceEEE--EECCEEEeccccccccccCCCCcEEEECCCCEEEEEecCCceEEEEe
Confidence 4688999988766655555556789999999 789998877 32 48999999998888888888887765
Q ss_pred cC
Q 021698 286 DG 287 (309)
Q Consensus 286 ~g 287 (309)
..
T Consensus 110 Ap 111 (270)
T 2qjv_A 110 AP 111 (270)
T ss_dssp EE
T ss_pred ee
Confidence 53
No 166
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=93.67 E-value=0.16 Score=44.32 Aligned_cols=82 Identities=15% Similarity=0.054 Sum_probs=58.1
Q ss_pred EEEEEcCCCcCCccccCcc-----EEEEEEeC-EEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEEEEEcCCc
Q 021698 216 AIVRFKAGSVEPAHHHTFG-----HDLVVLEG-KKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWDGRW 289 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~-----e~vyVl~G-~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i~~~g~~ 289 (309)
.+.++.||+.+++|..+.. ++..+.-. ...+ .++++++..++|.++++.-..+|.+.|.++..-++...
T Consensus 105 ~fs~L~pG~~I~pH~g~~n~~lR~HL~L~~p~~~~~i--~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~RvvL~~--- 179 (197)
T 3rcq_A 105 KYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKI--RCANETKTWEEGKVLIFDDSFEHEVWQDASSFRLIFIV--- 179 (197)
T ss_dssp EEEEECTTEEEEEECCSCTTEEEEEEEEECCSSSEEE--EETTEEECCCBTCEEEECTTSCEEEEECSSSCEEEEEE---
T ss_pred EEEEeCCCCCcCCeeCCCCCeEEEEEEEEeCCCCcEE--EECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEEEEEE---
Confidence 5678999999999988753 33333322 4556 67999999999999999999999999998654332221
Q ss_pred ccccchhHHHHHHH
Q 021698 290 DMFFDEDLETAKKA 303 (309)
Q Consensus 290 ~i~~~~~~~~a~~~ 303 (309)
| +..|++..++++
T Consensus 180 D-~~rPdl~~~er~ 192 (197)
T 3rcq_A 180 D-VWHPELTPQQRR 192 (197)
T ss_dssp E-EECTTSCHHHHH
T ss_pred e-eeCCCCCHHHHh
Confidence 2 344666555543
No 167
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=93.31 E-value=0.29 Score=48.29 Aligned_cols=58 Identities=22% Similarity=0.249 Sum_probs=44.4
Q ss_pred cCCCc-CCccccCccEEEEEEeCEEEEEEEeCC-----------------------eEEEecCCcEEEECCCCcEEEEEc
Q 021698 221 KAGSV-EPAHHHTFGHDLVVLEGKKSVWNLTKG-----------------------ERFDLTVGDYLFTPAGDVHRVKYY 276 (309)
Q Consensus 221 ~pG~~-~p~H~H~~~e~vyVl~G~l~v~~~~~~-----------------------~~~~L~pGd~i~iP~g~~H~~~n~ 276 (309)
++|+. .++|+-+..-+++-+.|+-++++.-.. ..++|+|||.+|||+|.+|...+.
T Consensus 172 p~Gs~g~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H~~~s~ 251 (489)
T 4diq_A 172 PPNSQGFAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIHQAECQ 251 (489)
T ss_dssp CSSBCCSCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEEEEEBC
T ss_pred CCCcccccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCceEEEec
Confidence 44443 478888888888889998777532211 258999999999999999999998
Q ss_pred CC
Q 021698 277 EE 278 (309)
Q Consensus 277 ~d 278 (309)
++
T Consensus 252 ~~ 253 (489)
T 4diq_A 252 DG 253 (489)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 168
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=92.69 E-value=0.21 Score=42.17 Aligned_cols=50 Identities=16% Similarity=0.095 Sum_probs=35.7
Q ss_pred HHHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCcceEEEEecCchh
Q 021698 28 DALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVG 81 (309)
Q Consensus 28 ~~l~~~l~~~g~~v~d~g~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G 81 (309)
..|.+.|++.|++|.+.+. ++...+..++.+..+. ..+|.-|.--|+|.|
T Consensus 43 ~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~----~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 43 DIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSI----DEVDVIISTGGTGYS 94 (178)
T ss_dssp HHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTC----TTCCEEEEESCCSSS
T ss_pred HHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhc----CCCCEEEecCCcccC
Confidence 4578889999999999986 4455565566665555 567776666666665
No 169
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=91.28 E-value=1.1 Score=41.89 Aligned_cols=29 Identities=24% Similarity=0.257 Sum_probs=25.7
Q ss_pred EEEecCCcEEEECCCCcEEEEEcCCeEEE
Q 021698 254 RFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 254 ~~~L~pGd~i~iP~g~~H~~~n~~d~~~~ 282 (309)
...+.|||.+|||+|-.|.+.|.+++..+
T Consensus 257 ~~~l~pGd~l~iP~gw~H~v~~~~~sisv 285 (336)
T 3k2o_A 257 EILQKPGETVFVPGGWWHVVLNLDTTIAI 285 (336)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSCEEEE
T ss_pred EEEECCCCEEEeCCCCcEEEecCCCeEEE
Confidence 57899999999999999999999976544
No 170
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=90.77 E-value=0.85 Score=44.53 Aligned_cols=65 Identities=23% Similarity=0.294 Sum_probs=47.8
Q ss_pred EEEcCCCcCCccccCcc--EEEEEEeCEEEEEEE----------------------------eCCeEEEecCCcEEEECC
Q 021698 218 VRFKAGSVEPAHHHTFG--HDLVVLEGKKSVWNL----------------------------TKGERFDLTVGDYLFTPA 267 (309)
Q Consensus 218 v~l~pG~~~p~H~H~~~--e~vyVl~G~l~v~~~----------------------------~~~~~~~L~pGd~i~iP~ 267 (309)
+--++|+..++|..+.. -+..++.|+-++.+. ......++.|||.+|||+
T Consensus 201 ~mGp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfIPs 280 (451)
T 2yu1_A 201 LMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVIPS 280 (451)
T ss_dssp EEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEECT
T ss_pred EEccCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEeCC
Confidence 33456777788888754 455688888776421 013457899999999999
Q ss_pred CCcEEEEEcCCeEEE
Q 021698 268 GDVHRVKYYEETEFF 282 (309)
Q Consensus 268 g~~H~~~n~~d~~~~ 282 (309)
|=.|.+.|..++..+
T Consensus 281 GWwH~V~nledsIai 295 (451)
T 2yu1_A 281 GWIHAVYTPTDTLVF 295 (451)
T ss_dssp TCEEEEECSSCEEEE
T ss_pred CceEEEecCCCeEEE
Confidence 999999999877543
No 171
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=90.72 E-value=0.81 Score=44.65 Aligned_cols=65 Identities=25% Similarity=0.230 Sum_probs=48.6
Q ss_pred EEEcCCCcCCccccCccE--EEEEEeCEEEEEEEe----------------------------CCeEEEecCCcEEEECC
Q 021698 218 VRFKAGSVEPAHHHTFGH--DLVVLEGKKSVWNLT----------------------------KGERFDLTVGDYLFTPA 267 (309)
Q Consensus 218 v~l~pG~~~p~H~H~~~e--~vyVl~G~l~v~~~~----------------------------~~~~~~L~pGd~i~iP~ 267 (309)
+--++|+..++|.....- +..+++|+-++.+.- ..-..++.|||.+|||+
T Consensus 236 ~mG~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIPs 315 (447)
T 3kv4_A 236 LMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPT 315 (447)
T ss_dssp EEECTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEECT
T ss_pred EEeCCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecCC
Confidence 344567777888877654 557899988875310 11367899999999999
Q ss_pred CCcEEEEEcCCeEEE
Q 021698 268 GDVHRVKYYEETEFF 282 (309)
Q Consensus 268 g~~H~~~n~~d~~~~ 282 (309)
|-.|.+.|..++..+
T Consensus 316 GWwH~V~nledsIai 330 (447)
T 3kv4_A 316 GWIHAVLTPVDCLAF 330 (447)
T ss_dssp TCEEEEEESSCEEEE
T ss_pred CCeEEEecCCCEEEE
Confidence 999999999887554
No 172
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=90.67 E-value=0.67 Score=45.73 Aligned_cols=65 Identities=23% Similarity=0.186 Sum_probs=49.1
Q ss_pred EEEcCCCcCCccccCccE--EEEEEeCEEEEEEEeC----------------------------CeEEEecCCcEEEECC
Q 021698 218 VRFKAGSVEPAHHHTFGH--DLVVLEGKKSVWNLTK----------------------------GERFDLTVGDYLFTPA 267 (309)
Q Consensus 218 v~l~pG~~~p~H~H~~~e--~vyVl~G~l~v~~~~~----------------------------~~~~~L~pGd~i~iP~ 267 (309)
+--++|+..++|.+...- +..++.|+-++.+.-. .-..++.|||.+|||+
T Consensus 271 ~mG~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPs 350 (488)
T 3kv5_D 271 LMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPT 350 (488)
T ss_dssp EEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECT
T ss_pred EEcCCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCC
Confidence 344667888899887765 5578999888753211 1257899999999999
Q ss_pred CCcEEEEEcCCeEEE
Q 021698 268 GDVHRVKYYEETEFF 282 (309)
Q Consensus 268 g~~H~~~n~~d~~~~ 282 (309)
|=.|.+.|..++..+
T Consensus 351 GWwH~V~nledsIai 365 (488)
T 3kv5_D 351 GWIHAVLTSQDCMAF 365 (488)
T ss_dssp TCEEEEEEEEEEEEE
T ss_pred CceEEeeCCCCeEEE
Confidence 999999999876544
No 173
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=90.62 E-value=0.67 Score=44.17 Aligned_cols=63 Identities=25% Similarity=0.238 Sum_probs=43.8
Q ss_pred EcCCCcCCccccCccE--EEEEEeCEEEEEEE----------------------------eCCeEEEecCCcEEEECCCC
Q 021698 220 FKAGSVEPAHHHTFGH--DLVVLEGKKSVWNL----------------------------TKGERFDLTVGDYLFTPAGD 269 (309)
Q Consensus 220 l~pG~~~p~H~H~~~e--~vyVl~G~l~v~~~----------------------------~~~~~~~L~pGd~i~iP~g~ 269 (309)
-++|+..+.|.....- +..+++|+-++.+. ...-..++.|||.+|||+|-
T Consensus 154 Gp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIPsGW 233 (371)
T 3k3o_A 154 SVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGW 233 (371)
T ss_dssp ECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEECTTC
T ss_pred cCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeCCCC
Confidence 3456666777666554 34577777666421 01245789999999999999
Q ss_pred cEEEEEcCCeEEE
Q 021698 270 VHRVKYYEETEFF 282 (309)
Q Consensus 270 ~H~~~n~~d~~~~ 282 (309)
.|.+.|..++..+
T Consensus 234 wH~V~nledSIai 246 (371)
T 3k3o_A 234 IHAVLTPVDCLAF 246 (371)
T ss_dssp EEEEEEEEEEEEE
T ss_pred eEEEecCCCeEEE
Confidence 9999998876543
No 174
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=90.41 E-value=0.71 Score=42.12 Aligned_cols=85 Identities=16% Similarity=0.181 Sum_probs=44.4
Q ss_pred EEEEEcCCCcCCcccc-CccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECC-C----CcEEEEEcCCeEEEEE-----
Q 021698 216 AIVRFKAGSVEPAHHH-TFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPA-G----DVHRVKYYEETEFFIK----- 284 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H-~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~-g----~~H~~~n~~d~~~~i~----- 284 (309)
..+++++|........ ...-++||++|++++ ++....|.+||.+++.. + ..-.+.+.++..++++
T Consensus 170 ~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v----~g~~~~l~~~d~~~~~~~~~~~~~~l~l~a~~~a~~Ll~~G~Pl 245 (277)
T 2p17_A 170 VEMIVEPGTTVVQDLPGHYNGFLYILEGSGVF----GADNIEGKAGQALFFSRHNRGEETELNVTAREKLRLLLYAGEPV 245 (277)
T ss_dssp EEEEECTTCEEEEEEETTCEEEEEEEESEEEE----TTTTEEEETTEEEEECCCCTTCEEEEEEEESSSEEEEEEEECCC
T ss_pred EEEEECCCCEEEeccCCCCEEEEEEEeCeEEE----CCCceEeCCCcEEEEcCCCCCccceEEEEeCCCcEEEEEecccc
Confidence 3467888887654432 245688999999887 44234689999999986 6 4445666666665542
Q ss_pred -----EcCCcccccchhHHHHHHHH
Q 021698 285 -----WDGRWDMFFDEDLETAKKAV 304 (309)
Q Consensus 285 -----~~g~~~i~~~~~~~~a~~~~ 304 (309)
+-|+|.+.=.+++.+|.+.-
T Consensus 246 ~epi~~~gpfVmnt~eei~qA~~d~ 270 (277)
T 2p17_A 246 NEPVVAYGPFVMNTPEQIREAIRDY 270 (277)
T ss_dssp CCCC---------------------
T ss_pred CCCeEecCCeeeCCHHHHHHHHHHH
Confidence 33444455556677776654
No 175
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=90.03 E-value=0.8 Score=43.94 Aligned_cols=63 Identities=22% Similarity=0.202 Sum_probs=44.6
Q ss_pred EcCCCcCCccccCccE--EEEEEeCEEEEEEE----------------------------eCCeEEEecCCcEEEECCCC
Q 021698 220 FKAGSVEPAHHHTFGH--DLVVLEGKKSVWNL----------------------------TKGERFDLTVGDYLFTPAGD 269 (309)
Q Consensus 220 l~pG~~~p~H~H~~~e--~vyVl~G~l~v~~~----------------------------~~~~~~~L~pGd~i~iP~g~ 269 (309)
-++|+..++|...... +..+++|+-.+.+. ...-...+.|||.+|||+|-
T Consensus 181 Gp~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIPsGW 260 (392)
T 3pua_A 181 CVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSGW 260 (392)
T ss_dssp ECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEECTTC
T ss_pred eCCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeCCCc
Confidence 3556666777666543 45677887776421 01246789999999999999
Q ss_pred cEEEEEcCCeEEE
Q 021698 270 VHRVKYYEETEFF 282 (309)
Q Consensus 270 ~H~~~n~~d~~~~ 282 (309)
.|.+.|..++..+
T Consensus 261 wH~V~nledSIai 273 (392)
T 3pua_A 261 IYATLTPVDCLAF 273 (392)
T ss_dssp EEEEEEEEEEEEE
T ss_pred eEEEecCCCEEEE
Confidence 9999999876553
No 176
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=89.97 E-value=0.86 Score=44.53 Aligned_cols=51 Identities=16% Similarity=0.129 Sum_probs=41.9
Q ss_pred CccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEEEE
Q 021698 232 TFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 232 ~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i~ 284 (309)
..++++|+-+|++.+ .++=....++|||+++||.|+.+++.-.+....+|+
T Consensus 177 DGD~Livpq~G~l~i--~TEfG~L~v~pgei~VIPRGi~frv~l~~p~Rgyi~ 227 (471)
T 1eyb_A 177 DGDFLIVPQKGNLLI--YTEFGKMLVQPNEICVIQRGMRFSIDVFEETRGYIL 227 (471)
T ss_dssp SEEEEEEEEESCEEE--EETTEEEEECTTEEEEECTTCCEEEECSSSEEEEEE
T ss_pred CCCEEEEEEeCCEEE--EEecccEEeccCCEEEECCccEEEEeeCCCceEEEE
Confidence 455667899999999 678888999999999999999999977665544443
No 177
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=88.96 E-value=0.33 Score=44.78 Aligned_cols=68 Identities=13% Similarity=0.054 Sum_probs=47.5
Q ss_pred EEEcCCCcCCccccCcc-----------EEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCe-EEEEEE
Q 021698 218 VRFKAGSVEPAHHHTFG-----------HDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEET-EFFIKW 285 (309)
Q Consensus 218 v~l~pG~~~p~H~H~~~-----------e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~-~~~i~~ 285 (309)
+++.||+.+.+|.-+.+ ++-++..-.+.+ .++++.+.+++|+++|+....+|++.|.++. .+.++.
T Consensus 96 lrL~PG~~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f--~vdg~~~~m~~GE~w~~d~~~~H~v~N~g~~~RIhLv~ 173 (290)
T 1e5r_A 96 SRNLKNAIVIPHRDFVELDREVDRYFRTFMVLEDSPLAFH--SNEDTVIHMRPGEIWFLDAATVHSAVNFSEISRQSLCV 173 (290)
T ss_dssp EEEEESEEEEEECCC--------CBCCEEEECSCCTTEEE--EETTEEECCCTTEEEECCTTSCEEEEESSSSCCCEEEE
T ss_pred EEeCCCCEeeCccCccccccccCCceEEEeeEecCCCcEE--EECCEEEecCCCCEEEEcCCCeeEEEcCCCCCeEEEEE
Confidence 47888888887755511 111222333444 6799999999999999999999999999863 444444
Q ss_pred cC
Q 021698 286 DG 287 (309)
Q Consensus 286 ~g 287 (309)
|.
T Consensus 174 D~ 175 (290)
T 1e5r_A 174 DF 175 (290)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 178
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=88.70 E-value=1.2 Score=42.68 Aligned_cols=63 Identities=25% Similarity=0.211 Sum_probs=44.5
Q ss_pred EcCCCcCCccccCccE--EEEEEeCEEEEEEEe----------------------------CCeEEEecCCcEEEECCCC
Q 021698 220 FKAGSVEPAHHHTFGH--DLVVLEGKKSVWNLT----------------------------KGERFDLTVGDYLFTPAGD 269 (309)
Q Consensus 220 l~pG~~~p~H~H~~~e--~vyVl~G~l~v~~~~----------------------------~~~~~~L~pGd~i~iP~g~ 269 (309)
-++|+..+.|.....- +..++.|+-++.+.- ..-...+.|||.+|||+|-
T Consensus 182 Gp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIPsGW 261 (397)
T 3kv9_A 182 GVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGW 261 (397)
T ss_dssp ECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEECTTC
T ss_pred cCCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeCCCC
Confidence 3456667777776554 446777777764211 1234689999999999999
Q ss_pred cEEEEEcCCeEEE
Q 021698 270 VHRVKYYEETEFF 282 (309)
Q Consensus 270 ~H~~~n~~d~~~~ 282 (309)
.|.+.|..++..+
T Consensus 262 ~H~V~nledSIai 274 (397)
T 3kv9_A 262 IHAVLTSQDCMAF 274 (397)
T ss_dssp EEEEEEEEEEEEE
T ss_pred eEEccCCcCeEEE
Confidence 9999999776543
No 179
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=88.05 E-value=0.65 Score=38.84 Aligned_cols=66 Identities=15% Similarity=0.069 Sum_probs=42.0
Q ss_pred CCCcEEEEEeCcccHHHH---------HHHHHHHHhC-----CCcEEEecC--CCCcchhHHHHHHhhcCCCCCCcceEE
Q 021698 10 PHPLKIIAGADSFGAELK---------DALVSHLRSL-----NIDVEDLGT--SDYYSIGAEVGRRVSSSDSSETTTRGL 73 (309)
Q Consensus 10 ~~~mkI~ig~D~~g~~lk---------~~l~~~l~~~-----g~~v~d~g~--~~y~~~a~~va~~v~~~~~~~~~~~gi 73 (309)
.+++||+|-+ .|-++- ..|.+.|++. |+++.+++. ++...+..++.+.+.. ..+|.-|
T Consensus 3 ~~~~rv~Iis--tGde~~~G~~~d~n~~~l~~~l~~~~~~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~----~~~DlVi 76 (167)
T 1uuy_A 3 GPEYKVAILT--VSDTVSAGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQKWSDV----DEMDLIL 76 (167)
T ss_dssp CCSEEEEEEE--ECHHHHTTSSCCSHHHHHHHHHHHTTTTTTSEEEEEEEEECSCHHHHHHHHHHHHHT----SCCSEEE
T ss_pred CCCcEEEEEE--ECCcccCCCCccCcHHHHHHHHHhccccCCCcEEeEEEEcCCCHHHHHHHHHHHHhc----CCCCEEE
Confidence 4567777665 222221 2344555555 999999885 4566677777776643 3578777
Q ss_pred EEecCchh
Q 021698 74 VACGTGVG 81 (309)
Q Consensus 74 ~~cgtG~G 81 (309)
+--|+|.|
T Consensus 77 ttGG~g~g 84 (167)
T 1uuy_A 77 TLGGTGFT 84 (167)
T ss_dssp EESCCSSS
T ss_pred ECCCCCCC
Confidence 77788776
No 180
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=88.00 E-value=1.3 Score=40.74 Aligned_cols=69 Identities=9% Similarity=0.024 Sum_probs=47.6
Q ss_pred EEEEEcCCCcCCcc-ccCccEE-EEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEc----CCeEEEEEEc
Q 021698 216 AIVRFKAGSVEPAH-HHTFGHD-LVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYY----EETEFFIKWD 286 (309)
Q Consensus 216 ~~v~l~pG~~~p~H-~H~~~e~-vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~----~d~~~~i~~~ 286 (309)
..+++++|...... .=...|+ ++.+.|..++ .++++++.|.+-|++|+|.|..-..... ++.++.+...
T Consensus 60 ~~l~L~~~~~~~~~~fl~~rE~~iV~lgG~~~V--~vdg~~f~lg~~dalYVp~G~~~v~~as~d~~~~a~fav~sA 134 (289)
T 1ywk_A 60 EELEIILDKELGVDYFLERRELGVINIGGPGFI--EIDGAKETMKKQDGYYIGKETKHVRFSSENPDNPAKFYISCV 134 (289)
T ss_dssp SCEECCCSGGGTSSSTTTTEEEEEEECSSCEEE--EETTEEEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEEEE
T ss_pred ceEEcCCCceecccccCCCcEEEEEEccCeEEE--EECCEEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEEcc
Confidence 34667777554433 1234455 4679999999 7899999999999999999987444442 3456665544
No 181
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=86.77 E-value=3.1 Score=37.47 Aligned_cols=66 Identities=20% Similarity=0.144 Sum_probs=45.4
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CCeEEEecCCcEEEECCCCcEEEEEcCCeEEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KGERFDLTVGDYLFTPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i 283 (309)
..+++++|...........-++||++|++++ .- +++...|.+||.+++..+..=.+.+.++.++++
T Consensus 185 ~~~~L~~g~~~~~~~~~~~~~l~v~~G~v~v--~g~~~~~~~l~~gd~~~l~~~~~l~l~a~~~a~~LL 251 (256)
T 2vec_A 185 HHIVLDKGESANFQLHGPRAYLQSIHGKFHA--LTHHEEKAALTCGDGAFIRDEANITLVADSPLRALL 251 (256)
T ss_dssp EEEEECTTCEEEEECSSSEEEEEEEESCEEE--EETTEEEEEECTTCEEEEESCSEEEEEESSSEEEEE
T ss_pred EEEEECCCCEEEEecCCCeEEEEEEECEEEE--CCccccceEECCCCEEEECCCCeEEEEeCCCCEEEE
Confidence 3467888887644333322778999999998 31 123467999999999877666677766666543
No 182
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=86.67 E-value=1 Score=42.96 Aligned_cols=29 Identities=24% Similarity=0.394 Sum_probs=24.6
Q ss_pred CeEEEecCCcEEEECCCCcEEEEEcCCeE
Q 021698 252 GERFDLTVGDYLFTPAGDVHRVKYYEETE 280 (309)
Q Consensus 252 ~~~~~L~pGd~i~iP~g~~H~~~n~~d~~ 280 (309)
.=++.-.+||.||||+|.+|+++|..++.
T Consensus 292 ~~~~~Q~~GeavfiPaG~~HQV~Nl~~~i 320 (392)
T 2ypd_A 292 TCTLIQFLGDAIVLPAGALHQVQNFHSCI 320 (392)
T ss_dssp CEEEEEETTCEEEECTTCEEEEEESSEEE
T ss_pred eEEEEEcCCCEEEecCCCHHHHhcccchh
Confidence 34466789999999999999999999654
No 183
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=86.33 E-value=3 Score=38.59 Aligned_cols=36 Identities=22% Similarity=0.139 Sum_probs=31.4
Q ss_pred CccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCC
Q 021698 232 TFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGD 269 (309)
Q Consensus 232 ~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~ 269 (309)
..-.+++|++|+.++ ..+++.+.|++|++++||++.
T Consensus 268 ~~~~il~v~~G~~~l--~~~~~~~~l~~G~~~~vpa~~ 303 (319)
T 1qwr_A 268 ESFLICSVIEGSGLL--KYEDKTCPLKKGDHFILPAQM 303 (319)
T ss_dssp SSCEEEEEEEEEEEE--EETTEEEEEETTCEEEECTTC
T ss_pred CccEEEEEEcCeEEE--EECCEEEEEcCCcEEEEeCCC
Confidence 456788899999999 557788999999999999987
No 184
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=85.76 E-value=2.1 Score=32.79 Aligned_cols=48 Identities=13% Similarity=0.210 Sum_probs=38.5
Q ss_pred ccEEEEEEeCEEEEEEEeCC--eEEEecCCcEEEECCCCcEEEEEcCCeEEE
Q 021698 233 FGHDLVVLEGKKSVWNLTKG--ERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 233 ~~e~vyVl~G~l~v~~~~~~--~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~ 282 (309)
..|..-|++|++++. ..+ ++....+|+.+.+|++..-.++....+..+
T Consensus 41 ~~E~M~vvsG~~~V~--lpg~~ew~~~~aGesF~Vpans~F~l~v~~~~~Yl 90 (94)
T 2oyz_A 41 APERMTVVKGALVVK--RVGEADWTTYSSGESFDVEGNSSFELQVKDATAYL 90 (94)
T ss_dssp SCEEEEEEESEEEEE--ETTCSSCEEEETTCEEEECSSEEEEEEESSCEEEE
T ss_pred CeEEEEEEEeEEEEE--cCCCCcCEEECCCCEEEECCCCEEEEEEcccEeEE
Confidence 457788999999995 443 578899999999999998888877665543
No 185
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=84.65 E-value=3.2 Score=34.73 Aligned_cols=127 Identities=21% Similarity=0.245 Sum_probs=72.3
Q ss_pred CCCCCcEEEEE--eCcccHH---HHHHHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCcceEEEEecCch
Q 021698 8 AAPHPLKIIAG--ADSFGAE---LKDALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGV 80 (309)
Q Consensus 8 ~~~~~mkI~ig--~D~~g~~---lk~~l~~~l~~~g~~v~d~g~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~ 80 (309)
.+.++|||.|- +|..|.- =-..|.+.|++.|++|.+.+. ++...+...+.+.+.+ +.+|.-|+--|+|.
T Consensus 6 ~~~~~~~v~Ii~tGdE~g~i~D~n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~----~~~DlVittGG~g~ 81 (172)
T 1mkz_A 6 TEFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIAS----DDVQVVLITGGTGL 81 (172)
T ss_dssp SSCCCCEEEEEEECSSCCGGGCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHS----SSCCEEEEESCCSS
T ss_pred CCCCCCEEEEEEEeCCCCcccCccHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhc----CCCCEEEeCCCCCC
Confidence 33566776554 4655531 124577888899999999875 4566677777777654 45787777778877
Q ss_pred hh-----hhhhcC----CCceEE---EEeCCH--HHHHHHHh----hcCcceeeecccccCHHHHHH-HHHHHhcCC
Q 021698 81 GV-----AIFANK----NPGVFA---TTCLTP--ADALNTRS----INNCNVLAVSGMSTSKESAVE-ILDTWLKTP 138 (309)
Q Consensus 81 G~-----~i~aNK----~~gira---a~~~~~--~~A~~~r~----hNnaNvl~~g~~~~~~~~a~~-i~~~~l~~~ 138 (309)
|- ...+.- .+|..- .+...+ ..+.++|. .++..|++|++--.+.....+ ++.-+|..-
T Consensus 82 ~~~D~t~ea~~~~~~~~l~g~~~~~~~i~~~p~G~~~~~a~~~~G~~~~~~v~~LPG~P~~~~~~~~~~v~p~L~~~ 158 (172)
T 1mkz_A 82 TEGDQAPEALLPLFDREVEGFGEVFRMLSFEEIGTSTLQSRAVAGVANKTLILAMPGSTKACRTAWENIIAPQLDAR 158 (172)
T ss_dssp STTCCHHHHHGGGCSEECHHHHHHHHHHHHHHHGGGGGGCCCEEEEETTEEEEEECSSHHHHHHHHHHTHHHHHCTT
T ss_pred CCCCCHHHHHHHHhcccCCccHHHHHHHhhcccCcceecccccceeECCEEEEECCCCHHHHHHHHHHHHHHHHhhh
Confidence 52 111111 111100 000000 11233331 477889999998766666544 456666553
No 186
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=84.09 E-value=4.9 Score=35.73 Aligned_cols=63 Identities=10% Similarity=0.028 Sum_probs=45.2
Q ss_pred EEEEEcCCCcCCccccC-ccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEEEE
Q 021698 216 AIVRFKAGSVEPAHHHT-FGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~-~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~i~ 284 (309)
..+++++|........+ ..-++||++|++++ ++ ..|.+||.+.+..+..=.+.+.++..++++
T Consensus 163 ~~~~l~~g~~~~~~~~~~~~~~~~v~~G~v~v----~g--~~l~~gd~~~~~~~~~l~l~a~~~a~~Ll~ 226 (242)
T 1tq5_A 163 YRWALLKDEQSVHQIAAERRVWIQVVKGNVTI----NG--VKASTSDGLAIWDEQAISIHADSDSEVLLF 226 (242)
T ss_dssp EEEEECTTCEEEECCCTTCEEEEEEEESEEEE----TT--EEEETTCEEEEESCSCEEEEESSSEEEEEE
T ss_pred EEEEECCCCEEEeecCCCcEEEEEEccCcEEE----CC--EEeCCCCEEEECCCCeEEEEeCCCCEEEEE
Confidence 45678888876433322 45678999999988 44 369999999998877667777666666544
No 187
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=83.83 E-value=0.24 Score=38.66 Aligned_cols=48 Identities=15% Similarity=0.292 Sum_probs=31.7
Q ss_pred eEEEEecCchhhhhhhcCCCc----------eEEEEeCCHHHHHHHHhhcCcceeeecccccC
Q 021698 71 RGLVACGTGVGVAIFANKNPG----------VFATTCLTPADALNTRSINNCNVLAVSGMSTS 123 (309)
Q Consensus 71 ~gi~~cgtG~G~~i~aNK~~g----------iraa~~~~~~~A~~~r~hNnaNvl~~g~~~~~ 123 (309)
+-+++||+|+|.||.++|++- |.+.-..+... ...++.++..+-.+-.
T Consensus 6 kIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~~~~~~~~-----~~~~~D~Ii~t~~l~~ 63 (109)
T 2l2q_A 6 NILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAIAETRLSE-----VVDRFDVVLLAPQSRF 63 (109)
T ss_dssp EEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEECSTTHHH-----HTTTCSEEEECSCCSS
T ss_pred EEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEecHHHHHh-----hcCCCCEEEECCccHH
Confidence 579999999999999998864 22222222221 2467788877776543
No 188
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=83.76 E-value=4.6 Score=37.93 Aligned_cols=72 Identities=15% Similarity=0.058 Sum_probs=44.2
Q ss_pred EEEEEcCCCcC-CccccCccEEEEEEeCEEEEEEEeCCeE--EEecCCcEEEECCCCcEEEEEcCCeEE-EEEEcCCcc
Q 021698 216 AIVRFKAGSVE-PAHHHTFGHDLVVLEGKKSVWNLTKGER--FDLTVGDYLFTPAGDVHRVKYYEETEF-FIKWDGRWD 290 (309)
Q Consensus 216 ~~v~l~pG~~~-p~H~H~~~e~vyVl~G~l~v~~~~~~~~--~~L~pGd~i~iP~g~~H~~~n~~d~~~-~i~~~g~~~ 290 (309)
..+++..+..- ..-.|-..|.+ |.+|.+++++.-.+++ ..|.|+|+.|+.|-++|.|. |...+ .+-..+++.
T Consensus 337 ~~l~Vd~~d~~~DL~d~ge~hY~-v~~G~lTL~W~~~dGt~~a~L~PDgSAwv~PFV~H~w~--G~GtVlkLgsG~hl~ 412 (443)
T 3g7d_A 337 SFLRVDADGRGADLIDHAENHYV-VTEGRLTLEWDGPDGPASVELEPDGSAWTGPFVRHRWH--GTGTVLKFGSGAHLG 412 (443)
T ss_dssp EEEEEC------CBCCSSEEEEE-EEESCEEEEEEETTEEEEEEECTTCEEEECTTCCEEEE--SSEEEEEEEECSTTC
T ss_pred EEEEecCCCcchhhhhcccceEE-EecCceEEEecCCCCccceEECCCCceeeccccccccc--CCceEEEeccCCccc
Confidence 45566543222 23334444554 7999999964434444 68999999999999999997 44444 444444443
No 189
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=83.38 E-value=0.72 Score=42.52 Aligned_cols=21 Identities=24% Similarity=0.202 Sum_probs=19.1
Q ss_pred eEEEecCCcEEEECCCCcEEE
Q 021698 253 ERFDLTVGDYLFTPAGDVHRV 273 (309)
Q Consensus 253 ~~~~L~pGd~i~iP~g~~H~~ 273 (309)
..+.|+|||++|+|+|++|..
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~ 178 (300)
T 1zx5_A 158 NTFETTPYDTFVIRPGIPHAG 178 (300)
T ss_dssp EEEECCTTCEEEECTTCCEEE
T ss_pred ceeECCCCCEEEcCCCCceEc
Confidence 457899999999999999986
No 190
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=83.24 E-value=4.4 Score=31.94 Aligned_cols=65 Identities=12% Similarity=0.223 Sum_probs=45.3
Q ss_pred EEEEcCCCcCCccccC-ccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcCCeEEE
Q 021698 217 IVRFKAGSVEPAHHHT-FGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~-~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~d~~~~ 282 (309)
+=.+.||. .|.+... ..|..-|++|++++.+--..++....+|+.+.+|++..-.++....+..+
T Consensus 41 lGVm~PGe-~~YtF~T~~~E~MevvsG~l~V~Lpg~~eW~~~~aGesF~VpanssF~lkv~~~~~Y~ 106 (111)
T 3hqx_A 41 LGVILPTE-QPLTFETHVPERMEIISGECRVKIADSTESELFRAGQSFYVPGNSLFKIETDEVLDYV 106 (111)
T ss_dssp EEEECCCS-SCEEEECSSCEEEEEEESEEEEEETTCSSCEEEETTCEEEECTTCEEEEECSSCEEEE
T ss_pred EEEEeccc-cceEEcCCCcEEEEEEEeEEEEEcCCcccCEEeCCCCEEEECCCCcEEEEECcceeEE
Confidence 34556764 1223332 35778899999999522123678899999999999999888877666554
No 191
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=83.18 E-value=4.3 Score=36.87 Aligned_cols=76 Identities=18% Similarity=0.228 Sum_probs=50.1
Q ss_pred EEcCCCc---CCccccCcc---------EEEE--EEe--CEEEEEEEe------CCeEEEecCCcEEEECCCCcEEEEEc
Q 021698 219 RFKAGSV---EPAHHHTFG---------HDLV--VLE--GKKSVWNLT------KGERFDLTVGDYLFTPAGDVHRVKYY 276 (309)
Q Consensus 219 ~l~pG~~---~p~H~H~~~---------e~vy--Vl~--G~l~v~~~~------~~~~~~L~pGd~i~iP~g~~H~~~n~ 276 (309)
++.||+. .|+|.|+.. |..| +-. |.+-- .+ .+++..++-||.+.+|+|- |.....
T Consensus 158 v~tpgG~WSSyPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q--~vyt~d~~~de~~~V~~~d~VlvP~Gy-Hp~~a~ 234 (270)
T 2qjv_A 158 VYTNAGATSSWPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQ--RVYTDDRSLDECMAVYNRDVVXVPXGY-HPVATI 234 (270)
T ss_dssp EEECTTCEESCSCEECEEEETTTEEECEEEEEEEEESTTCEEEE--EEECTTSSSEEEEEEETTCEEEESSSB-CCEEEC
T ss_pred EEcCCCccccCCCcccccccCcccccceeEEEEECCCCCCEEEE--EEeCCCCCCceEEEEECCCEEecCCCc-CCCcCC
Confidence 4667653 499999863 4443 333 43332 23 4678999999999999999 997666
Q ss_pred CCeEEEEEEc--C---CcccccchhH
Q 021698 277 EETEFFIKWD--G---RWDMFFDEDL 297 (309)
Q Consensus 277 ~d~~~~i~~~--g---~~~i~~~~~~ 297 (309)
.....+.+|. | .|-+..+|+.
T Consensus 235 pGy~~YylwvMaG~~r~~~~~~dP~H 260 (270)
T 2qjv_A 235 AGYDNYYLNVMAGPLRXWRFTWEENH 260 (270)
T ss_dssp TTCEEEEEEEEECSSCCCCCEECGGG
T ss_pred CCcccEEEEEEECCCccccccCCCch
Confidence 5555555554 2 5666666653
No 192
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=82.32 E-value=3.5 Score=40.96 Aligned_cols=28 Identities=29% Similarity=0.355 Sum_probs=25.0
Q ss_pred EEEecCCcEEEECCCCcEEEEEcCCeEE
Q 021698 254 RFDLTVGDYLFTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 254 ~~~L~pGd~i~iP~g~~H~~~n~~d~~~ 281 (309)
...+.||+.+|||+|-.|.+.|..++.+
T Consensus 367 ~v~l~pGEtlfIPsGW~HaV~tleDSIa 394 (528)
T 3pur_A 367 RVVIKEGQTLLIPAGWIHAVLTPVDSLV 394 (528)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEEEEEE
T ss_pred EEEECCCCEEEecCCceEEEecCCCeEE
Confidence 4789999999999999999999987654
No 193
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=82.10 E-value=0.86 Score=42.33 Aligned_cols=21 Identities=29% Similarity=0.849 Sum_probs=19.6
Q ss_pred eEEEecCCcEEEECCCCcEEE
Q 021698 253 ERFDLTVGDYLFTPAGDVHRV 273 (309)
Q Consensus 253 ~~~~L~pGd~i~iP~g~~H~~ 273 (309)
..+.|+|||++|+|+|++|..
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~ 178 (319)
T 1qwr_A 158 RRIKIKPGDFYYVPSGTLHAL 178 (319)
T ss_dssp EEEECCTTCEEEECTTCCEEE
T ss_pred eEEEcCCCCEEEcCCCCceEe
Confidence 678999999999999999985
No 194
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=81.88 E-value=2 Score=36.22 Aligned_cols=48 Identities=17% Similarity=0.176 Sum_probs=33.7
Q ss_pred HHHHHHH---hCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCcceEEEEecCchh
Q 021698 29 ALVSHLR---SLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVG 81 (309)
Q Consensus 29 ~l~~~l~---~~g~~v~d~g~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G 81 (309)
.|.+.|+ +.|++| +++. ++...+...+.+.+.+ ..+|.-|+--|+|.|
T Consensus 29 ~l~~~l~~l~~~G~~v-~~~iv~Dd~~~I~~~l~~~~~~----~~~DlVittGG~g~g 81 (178)
T 2pbq_A 29 AIIDYLKDVIITPFEV-EYRVIPDERDLIEKTLIELADE----KGCSLILTTGGTGPA 81 (178)
T ss_dssp HHHHHHHHHBCSCCEE-EEEEECSCHHHHHHHHHHHHHT----SCCSEEEEESCCSSS
T ss_pred HHHHHHHHHHhCCCEE-EEEEcCCCHHHHHHHHHHHHhc----CCCCEEEECCCCCCC
Confidence 4555555 899999 8874 4566677777766653 357888888888876
No 195
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=81.80 E-value=2.7 Score=40.14 Aligned_cols=38 Identities=21% Similarity=0.281 Sum_probs=32.4
Q ss_pred ccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCC
Q 021698 230 HHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGD 269 (309)
Q Consensus 230 ~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~ 269 (309)
.+..-.+++|++|++++ ..+++...|++|+++|||++.
T Consensus 339 ~~~~~~il~v~~G~~~l--~~~~~~~~l~~G~~~fvpa~~ 376 (394)
T 2wfp_A 339 GQHSAAILFCVEGEAVL--RKDEQRLVLKPGESAFIGADE 376 (394)
T ss_dssp CCSSCEEEEEEEEEEEE--EETTEEEEECTTCEEEECGGG
T ss_pred cCCCcEEEEEEeceEEE--EECCeEEEEccCcEEEEeCCC
Confidence 44556788999999999 567788999999999999985
No 196
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=81.59 E-value=6.9 Score=35.77 Aligned_cols=88 Identities=11% Similarity=0.149 Sum_probs=53.2
Q ss_pred EEEEcCCCcCCccccC-ccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEc--CCeEEEE----------
Q 021698 217 IVRFKAGSVEPAHHHT-FGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYY--EETEFFI---------- 283 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~-~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~--~d~~~~i---------- 283 (309)
.+++++|........+ ..-++||++|++++ .-++....+.++..++..+|..=.+.+. ++..+++
T Consensus 173 ~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v--~g~~~~~~~~~~~~~~l~~gd~~~i~~~a~~~a~~LLl~G~Pl~epi 250 (290)
T 1j1l_A 173 DFKLDPGAKHSQPIPKGWTSFIYTISGDVYI--GPDDAQQKIEPHHTAVLGEGDSVQVENKDPKRSHFVLIAGEPLREPV 250 (290)
T ss_dssp EEEECTTCEEEEECCTTCEEEEEEEESCEEE--SCTTSCEEECTTEEEEECSCSEEEEECCSSSCEEEEEEEECCCCSCC
T ss_pred EEEECCCCEEEeecCCCCEEEEEEEeCeEEE--CCcccceeccCceEEEecCCCEEEEEEcCCCCcEEEEEEcccCCCCE
Confidence 4678888876433222 45778999999998 2111113455566666666655455532 3444433
Q ss_pred EEcCCcccccchhHHHHHHHHhh
Q 021698 284 KWDGRWDMFFDEDLETAKKAVEK 306 (309)
Q Consensus 284 ~~~g~~~i~~~~~~~~a~~~~~~ 306 (309)
++-|+|.+.=.+++.+|.+.-+.
T Consensus 251 ~~~gpFVmnt~eeI~qA~~d~~~ 273 (290)
T 1j1l_A 251 IQHGPFVMNTNEEISQAILDFRN 273 (290)
T ss_dssp EEETTEEESSHHHHHHHHHHHHT
T ss_pred EecCCeeeCCHHHHHHHHHHHHh
Confidence 34456666667889999876553
No 197
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=80.59 E-value=3.3 Score=34.49 Aligned_cols=69 Identities=22% Similarity=0.166 Sum_probs=43.7
Q ss_pred CCCCcEEEEEe--CcccH---HHHHHHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCcceEEEEecCchh
Q 021698 9 APHPLKIIAGA--DSFGA---ELKDALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVG 81 (309)
Q Consensus 9 ~~~~mkI~ig~--D~~g~---~lk~~l~~~l~~~g~~v~d~g~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G 81 (309)
..++||++|-+ |..|- .=-..|.+.|++.|++|.+.+. ++...+...+.+.+.+ ..+|.-|+--|+|.|
T Consensus 10 v~~~~rv~Ii~tGdElg~i~Dsn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~----~~~DlVittGG~g~g 85 (169)
T 1y5e_A 10 APKEVRCKIVTISDTRTEETDKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHK----EDVDVVLTNGGTGIT 85 (169)
T ss_dssp --CCCEEEEEEECSSCCTTTCHHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTC----TTCSEEEEECCCSSS
T ss_pred cccCCEEEEEEEcCccCeeccChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhc----CCCCEEEEcCCCCCC
Confidence 34667766553 44331 1123466677888999999885 4566677777776653 357877777777776
No 198
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=80.57 E-value=0.48 Score=36.87 Aligned_cols=20 Identities=10% Similarity=0.207 Sum_probs=18.1
Q ss_pred eEEEEecCchhhhhhhcCCC
Q 021698 71 RGLVACGTGVGVAIFANKNP 90 (309)
Q Consensus 71 ~gi~~cgtG~G~~i~aNK~~ 90 (309)
+-+++||+|++.|+.++|++
T Consensus 5 kIll~Cg~G~sTS~l~~k~~ 24 (106)
T 1e2b_A 5 HIYLFSSAGMSTSLLVSKMR 24 (106)
T ss_dssp EEEEECSSSTTTHHHHHHHH
T ss_pred EEEEECCCchhHHHHHHHHH
Confidence 57899999999999999875
No 199
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=79.07 E-value=7.1 Score=37.84 Aligned_cols=45 Identities=13% Similarity=0.191 Sum_probs=34.6
Q ss_pred ccCccEEEEEEeCEEEEEEEeCCe-E--EEecCCcEEEECCCCcEEEEEc
Q 021698 230 HHTFGHDLVVLEGKKSVWNLTKGE-R--FDLTVGDYLFTPAGDVHRVKYY 276 (309)
Q Consensus 230 ~H~~~e~vyVl~G~l~v~~~~~~~-~--~~L~pGd~i~iP~g~~H~~~n~ 276 (309)
.+....+++|++|++++ ..++. . ..|++|+++|||++..=.+.+.
T Consensus 376 ~~~~~~illv~~G~g~i--~~~~~~~~~~~l~~G~~~fvpa~~~~~i~g~ 423 (440)
T 1pmi_A 376 GLNGPSIVIATNGKGTI--QITGDDSTKQKIDTGYVFFVAPGSSIELTAD 423 (440)
T ss_dssp CCSSCEEEEEEESEEEE--EETTCGGGCEEEETTCEEEECTTCCEEEEEC
T ss_pred cCCCcEEEEEEeCeEEE--EeCCcccceEEeccCCEEEEeCCCcEEEEEe
Confidence 34566788999999999 55543 3 7899999999999965555554
No 200
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=78.91 E-value=2.4 Score=38.97 Aligned_cols=36 Identities=28% Similarity=0.159 Sum_probs=30.5
Q ss_pred Ccc-EEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCc
Q 021698 232 TFG-HDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDV 270 (309)
Q Consensus 232 ~~~-e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~ 270 (309)
..- .++.|++| +++ ..+++...|++|+++++|++..
T Consensus 246 ~~~~~il~v~~G-~~i--~~~~~~~~l~~G~~~~ipa~~~ 282 (300)
T 1zx5_A 246 GGVMNILYAAEG-YFI--LRGKETADLHRGYSCLVPASTD 282 (300)
T ss_dssp CSBCEEEEEEES-CEE--EESSSEEEECTTCEEEECTTCC
T ss_pred CCceEEEEEccc-EEE--EeCCeEEEEccceEEEEeCCCc
Confidence 444 78889999 998 5577888999999999999874
No 201
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=78.87 E-value=4.7 Score=31.51 Aligned_cols=46 Identities=24% Similarity=0.385 Sum_probs=36.7
Q ss_pred ccEEEEEEeCEEEEEEEeCC--eEEEecCCcEEEECCCCcEEEEEcCCeE
Q 021698 233 FGHDLVVLEGKKSVWNLTKG--ERFDLTVGDYLFTPAGDVHRVKYYEETE 280 (309)
Q Consensus 233 ~~e~vyVl~G~l~v~~~~~~--~~~~L~pGd~i~iP~g~~H~~~n~~d~~ 280 (309)
..|..-|++|.+++ .+.+ ++....+|+.+.+|++..-.++....+.
T Consensus 54 ~~E~MevvsG~l~V--~LpG~~eW~~~~aGesF~VpanssF~lkv~~~t~ 101 (106)
T 3eo6_A 54 VAETIRVLSGMAYY--HAEGANDVQELHAGDSMVIPANQSYRLEVMEPLD 101 (106)
T ss_dssp SCEEEEEEEEEEEE--ECTTCSSCEEEETTCEEEECSSSCEEEEEEEEEE
T ss_pred CcEEEEEEEeEEEE--ECCCCccCEEECCCCEEEECCCCcEEEEECceEE
Confidence 35778899999999 4544 6788999999999999988887765443
No 202
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=78.37 E-value=0.58 Score=36.74 Aligned_cols=23 Identities=26% Similarity=0.420 Sum_probs=18.1
Q ss_pred CcceEEEEecCchhhhh-hhcCCC
Q 021698 68 TTTRGLVACGTGVGVAI-FANKNP 90 (309)
Q Consensus 68 ~~~~gi~~cgtG~G~~i-~aNK~~ 90 (309)
..-+-+++||+|+|.|+ .++|++
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~ 43 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIK 43 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHH
T ss_pred cccEEEEECCCCHHHHHHHHHHHH
Confidence 34579999999999988 466653
No 203
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=78.19 E-value=5 Score=36.70 Aligned_cols=54 Identities=13% Similarity=0.217 Sum_probs=40.0
Q ss_pred CccEE-EEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCcEEEEEcC----CeEEEEEEcC
Q 021698 232 TFGHD-LVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYE----ETEFFIKWDG 287 (309)
Q Consensus 232 ~~~e~-vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~H~~~n~~----d~~~~i~~~g 287 (309)
...|+ ++.+.|..++ .++++++.|.+-|++|+|.|......... +.++.+....
T Consensus 77 ~~rE~~iV~l~G~~~V--~vdG~~f~lg~~dalYVp~g~~~v~~as~da~~~a~fav~sAP 135 (282)
T 1xru_A 77 ERRELGVINIGGAGTI--TVDGQCYEIGHRDALYVGKGAKEVVFASIDTGTPAKFYYNCAP 135 (282)
T ss_dssp TTEEEEEEECSSCEEE--EETTEEEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEEEEE
T ss_pred CCcEEEEEEccCeEEE--EECCEEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEEccc
Confidence 34455 4679999999 78999999999999999999975544433 3566655443
No 204
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=78.04 E-value=1.5 Score=41.97 Aligned_cols=22 Identities=23% Similarity=0.244 Sum_probs=19.3
Q ss_pred eEEEecCCcEEEECCCCcEEEE
Q 021698 253 ERFDLTVGDYLFTPAGDVHRVK 274 (309)
Q Consensus 253 ~~~~L~pGd~i~iP~g~~H~~~ 274 (309)
..+.|+|||++|+|+|++|..-
T Consensus 240 n~v~l~pGd~~fipAG~~HAy~ 261 (394)
T 2wfp_A 240 NVVKLNPGEAMFLFAETPHAYL 261 (394)
T ss_dssp EEEEECTTCEEEECTTCCEEEE
T ss_pred eEEECCCCCEEEcCCCCceEcC
Confidence 4578999999999999999863
No 205
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=77.40 E-value=11 Score=30.13 Aligned_cols=34 Identities=18% Similarity=0.339 Sum_probs=25.3
Q ss_pred EEEEEe---CcccHHHHHHHHHHHHhCCCcEEEecCCC
Q 021698 14 KIIAGA---DSFGAELKDALVSHLRSLNIDVEDLGTSD 48 (309)
Q Consensus 14 kI~ig~---D~~g~~lk~~l~~~l~~~g~~v~d~g~~~ 48 (309)
||++++ |.--.. |+.+...|+..||+|+|+|.+.
T Consensus 5 ~vvla~~~~d~HdiG-~~~v~~~l~~~G~~Vi~lG~~~ 41 (137)
T 1ccw_A 5 TIVLGVIGSDCHAVG-NKILDHAFTNAGFNVVNIGVLS 41 (137)
T ss_dssp EEEEEEETTCCCCHH-HHHHHHHHHHTTCEEEEEEEEE
T ss_pred EEEEEeCCCchhHHH-HHHHHHHHHHCCCEEEECCCCC
Confidence 677775 533333 4578888999999999999953
No 206
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=77.09 E-value=22 Score=30.64 Aligned_cols=40 Identities=15% Similarity=0.093 Sum_probs=28.5
Q ss_pred CCCcEEEEEe---CcccHHHHHHHHHHHHhCCCcEEEecCCCCc
Q 021698 10 PHPLKIIAGA---DSFGAELKDALVSHLRSLNIDVEDLGTSDYY 50 (309)
Q Consensus 10 ~~~mkI~ig~---D~~g~~lk~~l~~~l~~~g~~v~d~g~~~y~ 50 (309)
.++-||++++ |.--.. |+.+...|+..||+|+|+|.+--+
T Consensus 90 ~~~~~vll~~v~gd~HdiG-~~iv~~~l~~~G~~Vi~LG~~vp~ 132 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIG-HRLVTTMLGANGFQIVDLGVDVLN 132 (215)
T ss_dssp --CCEEEEEECTTCCCCHH-HHHHHHHHHHTSCEEEECCSSCCH
T ss_pred CCCCeEEEEeCCCChhHHH-HHHHHHHHHHCCCeEEEcCCCCCH
Confidence 3445899997 433333 467888899999999999996433
No 207
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=76.80 E-value=5.3 Score=34.11 Aligned_cols=118 Identities=14% Similarity=0.074 Sum_probs=64.9
Q ss_pred CCCCCcEEEEEeCcccHHH--------HHHHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCcceEEEEec
Q 021698 8 AAPHPLKIIAGADSFGAEL--------KDALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSETTTRGLVACG 77 (309)
Q Consensus 8 ~~~~~mkI~ig~D~~g~~l--------k~~l~~~l~~~g~~v~d~g~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~cg 77 (309)
...+++||+|-+ .|-++ -..|.+.|++.|++|.+.+. +++..+...+.+.+.+ .+|.-|+--|
T Consensus 26 ~~~~~~rvaIis--tGdEl~~G~~Dsn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~-----~~DlVIttGG 98 (185)
T 3rfq_A 26 AELVVGRALVVV--VDDRTAHGDEDHSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIG-----GVDLVVSVGG 98 (185)
T ss_dssp ---CCEEEEEEE--ECHHHHTTCCCSHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHT-----TCSEEEEESC
T ss_pred cCCCCCEEEEEE--ECcccCCCCcCcHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhC-----CCCEEEECCC
Confidence 445677776653 12222 14567788889999999885 5666677777776633 4787777777
Q ss_pred Cchhhh------hh--hc-CCCceEE-----EEeCCHHHHHHHH----hhcCcceeeecccccCHHHHHHHHH
Q 021698 78 TGVGVA------IF--AN-KNPGVFA-----TTCLTPADALNTR----SINNCNVLAVSGMSTSKESAVEILD 132 (309)
Q Consensus 78 tG~G~~------i~--aN-K~~gira-----a~~~~~~~A~~~r----~hNnaNvl~~g~~~~~~~~a~~i~~ 132 (309)
||.|-. +. .+ .+||+-- ++-.-.-.|.++| ..++.=|++|++.-.+...+.+.+.
T Consensus 99 ts~g~~D~t~eal~~l~~~~l~G~~~~f~~v~~kpG~p~a~lsR~~~G~~~~~~V~~LPGnP~aa~~~~~~l~ 171 (185)
T 3rfq_A 99 TGVTPRDVTPESTREILDREILGIAEAIRASGLSAGIIDAGLSRGLAGVSGSTLVVNLAGSRYAVRDGMATLN 171 (185)
T ss_dssp CSSSTTCCHHHHHHTTCSEECHHHHHHHHHHHHHTTCHHHHTCCCCEEEETTEEEEEECSSHHHHHHHHHHHH
T ss_pred CCCCCcccHHHHHHHHhcccCccHHHHHHHHhcCCCCCceeeeehhhcccCCeEEEECCCCHHHHHHHHHHHH
Confidence 887742 11 11 1223200 0000011233332 2367789999998666655555443
No 208
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=76.29 E-value=9.1 Score=31.70 Aligned_cols=118 Identities=11% Similarity=0.045 Sum_probs=65.9
Q ss_pred CcEEEEEeCccc----HHHHHHHHHHHHhCCCcEEEe--cC--------CCCcc---hhHHHHHHhhcCCCCCCcceEEE
Q 021698 12 PLKIIAGADSFG----AELKDALVSHLRSLNIDVEDL--GT--------SDYYS---IGAEVGRRVSSSDSSETTTRGLV 74 (309)
Q Consensus 12 ~mkI~ig~D~~g----~~lk~~l~~~l~~~g~~v~d~--g~--------~~y~~---~a~~va~~v~~~~~~~~~~~gi~ 74 (309)
+|||.+++=-.| .++-+++++.|++.| +|.+. +. +.+.. +...=.+.+. .+|--|.
T Consensus 2 ~mkIYlAGP~f~~~e~~~~~~~i~~~L~~~G-~Vl~~hv~~~~l~~~g~~~~~~~~~i~~~d~~~i~------~aD~vvA 74 (152)
T 4fyk_A 2 RRSVYFCGSIRGGREDQALYARIVSRLRRYG-KVLTEHVADAELEPLGEEAAGGDQFIHEQNLNWLQ------QADVVVA 74 (152)
T ss_dssp -CEEEEECCSTTCCTTHHHHHHHHHHHTTTS-EECCCC-------------CCCHHHHHHHHHHHHH------HCSEEEE
T ss_pred CceEEEECCCCCcHHHHHHHHHHHHHHHHcC-cccccccCchhhhhccccccCCHHHHHHHHHHHHH------HCCEEEE
Confidence 689999976665 367799999999999 77531 21 10111 2222222333 3566666
Q ss_pred E-----ecCchhhhhhhcCCCceEEEEeCC---HHHHHHHHhhcCcceeeecccccCHHHHHHHHHHHhcCCC
Q 021698 75 A-----CGTGVGVAIFANKNPGVFATTCLT---PADALNTRSINNCNVLAVSGMSTSKESAVEILDTWLKTPF 139 (309)
Q Consensus 75 ~-----cgtG~G~~i~aNK~~giraa~~~~---~~~A~~~r~hNnaNvl~~g~~~~~~~~a~~i~~~~l~~~f 139 (309)
. +||+.=+..|.-+-+=|.+-...+ ..+|.+.-.++..|+-+.--.- +...+|++.||.+..
T Consensus 75 ~l~~~d~Gt~~EiG~A~algkPV~~l~~~~~~~~ls~mi~G~~~~~~~~~~~Y~~---~el~~il~~f~~~~~ 144 (152)
T 4fyk_A 75 EVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAE---GEVETMLDRYFEAYL 144 (152)
T ss_dssp ECSSCCHHHHHHHHHHHHTTCCEEEEECGGGSCCCCHHHHHHCCSSSEEEEECCT---TCHHHHHHHHHC---
T ss_pred eCCCCCCCHHHHHHHHHHcCCeEEEEEeCCccchhHHHHcCCCCCCeEEEEEecH---HHHHHHHHHHHHhhH
Confidence 6 455543333333333455544322 2244444455447877766553 888999999988754
No 209
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis}
Probab=76.15 E-value=4.5 Score=39.40 Aligned_cols=47 Identities=30% Similarity=0.276 Sum_probs=38.8
Q ss_pred CcEEEEEeC--cccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHH
Q 021698 12 PLKIIAGAD--SFGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGR 58 (309)
Q Consensus 12 ~mkI~ig~D--~~g~~lk~~l~~~l~~~g~~v~d~g~~~y~~~a~~va~ 58 (309)
.-+|+||.| +++-.+++++.+-|.+.|.+|.|+|.-.-|-++..+-.
T Consensus 61 ~~~VvIG~D~R~ss~~~~~a~a~gl~s~Gi~V~~~g~~pTP~l~fav~~ 109 (469)
T 3pdk_A 61 RPKVIIGRDTRISGHMLEGALVAGLLSTGAEVMRLGVISTPGVAYLTKA 109 (469)
T ss_dssp SCEEEEEECSCTTHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHHHHH
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHHCCCEEEEeCCCChHHHHHHHHh
Confidence 348999999 57889999999999999999999997666666555543
No 210
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp}
Probab=76.03 E-value=3.3 Score=39.98 Aligned_cols=44 Identities=41% Similarity=0.368 Sum_probs=37.1
Q ss_pred EEEEEeC--cccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHH
Q 021698 14 KIIAGAD--SFGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVG 57 (309)
Q Consensus 14 kI~ig~D--~~g~~lk~~l~~~l~~~g~~v~d~g~~~y~~~a~~va 57 (309)
+|+||.| +++..|++++.+-|.+.|.+|.|+|.-.-|-++..+-
T Consensus 43 ~VvVG~D~R~ss~~l~~a~~~gl~s~G~~V~~~g~~pTP~~~~av~ 88 (443)
T 3i3w_A 43 FVIVGQDTRSSGGFLKFALVSGLNAAGIDVLDLGVVPTPVVAFMTV 88 (443)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHHHHHTCEEEEEEECCHHHHHHHHH
T ss_pred eEEEEeCCCcCHHHHHHHHHHHHHHCCCeEEEeCCCCHHHHHHHHH
Confidence 7999999 5688999999999999999999999766666655443
No 211
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=75.35 E-value=4.8 Score=34.98 Aligned_cols=58 Identities=21% Similarity=0.107 Sum_probs=40.9
Q ss_pred EEEEcCCCcCCccccCccEEE---EE----EeCEEEEEEEeC-------------------Ce--EEEecCCcEEEECCC
Q 021698 217 IVRFKAGSVEPAHHHTFGHDL---VV----LEGKKSVWNLTK-------------------GE--RFDLTVGDYLFTPAG 268 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~v---yV----l~G~l~v~~~~~-------------------~~--~~~L~pGd~i~iP~g 268 (309)
...+++|+....|.|+...+. |+ -.|.+.+ ... .. ...-++|+.+.+|+.
T Consensus 107 ~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f--~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS~ 184 (216)
T 2rg4_A 107 INILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKL--EDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESW 184 (216)
T ss_dssp EEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEE--ECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEETT
T ss_pred EEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEE--eCCccccccccCcccccCcccCCCeeEecCCCCeEEEECCC
Confidence 356788999999999865543 33 1467777 332 11 345679999999999
Q ss_pred CcEEEEEc
Q 021698 269 DVHRVKYY 276 (309)
Q Consensus 269 ~~H~~~n~ 276 (309)
.+|.+.-.
T Consensus 185 l~H~V~p~ 192 (216)
T 2rg4_A 185 LRHEVPMN 192 (216)
T ss_dssp SCEEECCC
T ss_pred CEEeccCC
Confidence 99998653
No 212
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=74.34 E-value=11 Score=28.65 Aligned_cols=74 Identities=12% Similarity=0.044 Sum_probs=44.4
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CCe------EEEecCCcEEEEC---CCCcE--EEEEcCCeEEEEE
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KGE------RFDLTVGDYLFTP---AGDVH--RVKYYEETEFFIK 284 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~~------~~~L~pGd~i~iP---~g~~H--~~~n~~d~~~~i~ 284 (309)
...+++|...-..-.+...+.+|++|.+++.... +++ ...+.|||++=.. .+.++ .+.+.+++.++.+
T Consensus 31 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG~~~~~~~~~~~~~~~a~~~~~~~~i 110 (142)
T 3mdp_A 31 EKSFPTGSVIFKENSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFGVSSLIKPYHYTSSARATKPVRVVDI 110 (142)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESCEEEECC---------CEEEEECTTCEECGGGSSTTCBCSSEEEESSCEEEEEE
T ss_pred EEecCCCCEEEeCCCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEechHHHcCCCCceEEEEECCcEEEEEE
Confidence 4566777665333334556788999999983111 221 4568999977432 34444 6777788887655
Q ss_pred EcCCcc
Q 021698 285 WDGRWD 290 (309)
Q Consensus 285 ~~g~~~ 290 (309)
....+.
T Consensus 111 ~~~~~~ 116 (142)
T 3mdp_A 111 NGARLR 116 (142)
T ss_dssp EHHHHH
T ss_pred eHHHHH
Confidence 544444
No 213
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=73.60 E-value=22 Score=29.58 Aligned_cols=69 Identities=22% Similarity=0.135 Sum_probs=44.9
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeE---EEecCCcEEEECCCCcEEEEEcCCeEEEEEEcC
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGER---FDLTVGDYLFTPAGDVHRVKYYEETEFFIKWDG 287 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~---~~L~pGd~i~iP~g~~H~~~n~~d~~~~i~~~g 287 (309)
..++++|...-..-.+...+.+|++|.+.+....+++. ..+.||+++- ....+.+.+.+++.++.+...
T Consensus 25 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~fG--~~~~~~~~A~~~~~v~~i~~~ 96 (222)
T 1ft9_A 25 SKIHAKGSLVCTGEGDENGVFVVVDGRLRVYLVGEEREISLFYLTSGDMFC--MHSGCLVEATERTEVRFADIR 96 (222)
T ss_dssp EEEECTTCEEECTTCCCCCEEEEEESEEEEEEEETTEEEEEEEEETTCEEE--SCSSCEEEESSCEEEEEECHH
T ss_pred EEEECCCCEEECCCCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEec--CCCCEEEEEccceEEEEEeHH
Confidence 45666776653333344567889999999842234544 4678999887 445667888888887655433
No 214
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=73.40 E-value=3.8 Score=34.60 Aligned_cols=51 Identities=16% Similarity=0.081 Sum_probs=37.3
Q ss_pred HHHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCcceEEEEecCchhh
Q 021698 28 DALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVGV 82 (309)
Q Consensus 28 ~~l~~~l~~~g~~v~d~g~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G~ 82 (309)
..|.+.|++.|+++.+++. +++..+...+.+.+.+ ..+|.-|+--|||.|-
T Consensus 43 ~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~----~~~DlVittGG~s~g~ 95 (178)
T 2pjk_A 43 DIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSI----DEVDVIISTGGTGYSP 95 (178)
T ss_dssp HHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTC----TTCCEEEEESCCSSST
T ss_pred HHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhc----CCCCEEEECCCCCCCC
Confidence 4577888999999999985 5666677777666653 3478777777777764
No 215
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=73.24 E-value=1.7 Score=36.33 Aligned_cols=57 Identities=12% Similarity=0.156 Sum_probs=36.3
Q ss_pred CcccHHHHHHHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCcceEEEEecCchh
Q 021698 20 DSFGAELKDALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVG 81 (309)
Q Consensus 20 D~~g~~lk~~l~~~l~~~g~~v~d~g~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G 81 (309)
|..+.-|++.+.+.|++.|++|...+. ++...+...+.+.+.+ .+|.-|+--|+|.|
T Consensus 24 D~n~~~l~~~~~~~l~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~-----~~DlVittGG~g~~ 82 (167)
T 2g2c_A 24 NKALPLLQRLMSDELQDYSYELISEVVVPEGYDTVVEAIATALKQ-----GARFIITAGGTGIR 82 (167)
T ss_dssp CCHHHHHHHHHCC----CEEEEEEEEEECSSHHHHHHHHHHHHHT-----TCSEEEEESCCSSS
T ss_pred ccHHHHHHHhHHhHHHHCCCEEeEEEEeCCCHHHHHHHHHHHHhC-----CCCEEEECCCCCCC
Confidence 555555555544448999999999875 4566677777666653 36877777777766
No 216
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=72.69 E-value=11 Score=30.96 Aligned_cols=60 Identities=13% Similarity=0.114 Sum_probs=37.5
Q ss_pred CCCcEEEEEe---CcccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCcceEEEEecC
Q 021698 10 PHPLKIIAGA---DSFGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSETTTRGLVACGT 78 (309)
Q Consensus 10 ~~~mkI~ig~---D~~g~~lk~~l~~~l~~~g~~v~d~g~~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgt 78 (309)
.++-||++++ |.--.. |+.+...|+..||+|+|+|.+.-++ .+.+.+.+ ... ..|.+|.+
T Consensus 16 ~~~~~vlla~~~gd~HdiG-~~~va~~l~~~G~eVi~lG~~~p~e---~lv~aa~~----~~~-diV~lS~~ 78 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRG-AKVVARALRDAGFEVVYTGLRQTPE---QVAMAAVQ----EDV-DVIGVSIL 78 (161)
T ss_dssp CCSCEEEEEEESSSSCCHH-HHHHHHHHHHTTCEEECCCSBCCHH---HHHHHHHH----TTC-SEEEEEES
T ss_pred CCCCEEEEEeCCCCccHHH-HHHHHHHHHHCCCEEEECCCCCCHH---HHHHHHHh----cCC-CEEEEEee
Confidence 3456888885 433333 4678888999999999999864332 33444443 222 35555654
No 217
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=72.57 E-value=3 Score=40.45 Aligned_cols=23 Identities=26% Similarity=0.355 Sum_probs=19.5
Q ss_pred eEEEecCCcEEEECCCCcEEEEE
Q 021698 253 ERFDLTVGDYLFTPAGDVHRVKY 275 (309)
Q Consensus 253 ~~~~L~pGd~i~iP~g~~H~~~n 275 (309)
....|+|||++|+|+|++|....
T Consensus 266 N~v~L~pGea~flpAg~~HAYl~ 288 (440)
T 1pmi_A 266 NHVGLNKGEAMFLQAKDPHAYIS 288 (440)
T ss_dssp EEEEECTTCEEEECTTCCEEEEE
T ss_pred ceEecCCCCEEecCCCCccccCC
Confidence 34679999999999999998643
No 218
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=72.53 E-value=0.71 Score=37.05 Aligned_cols=20 Identities=25% Similarity=0.513 Sum_probs=16.4
Q ss_pred ceEEEEecCchhhhhhh-cCC
Q 021698 70 TRGLVACGTGVGVAIFA-NKN 89 (309)
Q Consensus 70 ~~gi~~cgtG~G~~i~a-NK~ 89 (309)
-+-+++||+|+|.|+.+ +|+
T Consensus 14 kkIlvVC~sGmgTS~ml~~kl 34 (125)
T 1vkr_A 14 RKIIVACDAGMGSSAMGAGVL 34 (125)
T ss_dssp CEEEECCSSSSHHHHHHHHHH
T ss_pred cEEEEECCCcHHHHHHHHHHH
Confidence 47899999999999984 443
No 219
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=71.21 E-value=24 Score=29.20 Aligned_cols=71 Identities=14% Similarity=0.116 Sum_probs=46.0
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeE---EEecCCcEEEECCCCcEEEEEcCCeEEEEEEcCCc
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGER---FDLTVGDYLFTPAGDVHRVKYYEETEFFIKWDGRW 289 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~---~~L~pGd~i~iP~g~~H~~~n~~d~~~~i~~~g~~ 289 (309)
..++++|...-..-.+...+.+|++|.+.+....+++. ..+.|||++-. ...+.+.+.+++.++.+....+
T Consensus 29 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~~G~--~~~~~~~A~~~~~v~~i~~~~~ 102 (220)
T 2fmy_A 29 EQRYSKKAILYTPNTERNLVFLVKSGRVRVYLAYEDKEFTLAILEAGDIFCT--HTRAFIQAMEDTTILYTDIRNF 102 (220)
T ss_dssp EEEECTTCEEECTTCSSCEEEEEEESEEEEEEECSSCEEEEEEEETTCEEES--CSSSEEEESSSEEEEEEEHHHH
T ss_pred eeEeCCCCEEECCCCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEeCC--ccceEEEEcCcEEEEEEeHHHH
Confidence 45667776653333345567889999999842234443 57789998766 3456788888888875554433
No 220
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=69.06 E-value=20 Score=27.73 Aligned_cols=71 Identities=13% Similarity=0.058 Sum_probs=44.2
Q ss_pred EEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCC-eEEEecCCcEEEECC-------CCcEEEEEcCCeEEEEEEcCCc
Q 021698 218 VRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKG-ERFDLTVGDYLFTPA-------GDVHRVKYYEETEFFIKWDGRW 289 (309)
Q Consensus 218 v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~-~~~~L~pGd~i~iP~-------g~~H~~~n~~d~~~~i~~~g~~ 289 (309)
..+++|...-..--+...+.+|++|.+++ ...+ ....+.+||++-..+ ...+.+.+.+++.++.+....+
T Consensus 53 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~--~~~~~~~~~~~~G~~fG~~~~~~~~~~~~~~~~~a~~~~~v~~i~~~~~ 130 (160)
T 4f8a_A 53 VHCAPGDLIYHAGESVDSLCFVVSGSLEV--IQDDEVVAILGKGDVFGDVFWKEATLAQSCANVRALTYCDLHVIKRDAL 130 (160)
T ss_dssp EEECTTCEEECTTSBCCEEEEEEESEEEE--EETTEEEEEEETTCEEECCTTTCSSCCBCSSEEEESSCEEEEEEEHHHH
T ss_pred eeeCCCCEEEeCCCCccEEEEEEeeEEEE--EECCEEEEEecCCCEeCcHHHhcCcccceEEEEEECCceEEEEEcHHHH
Confidence 45555555422222345778899999999 4444 446899999876421 2345677778887765544433
Q ss_pred c
Q 021698 290 D 290 (309)
Q Consensus 290 ~ 290 (309)
.
T Consensus 131 ~ 131 (160)
T 4f8a_A 131 Q 131 (160)
T ss_dssp H
T ss_pred H
Confidence 3
No 221
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=67.79 E-value=7.2 Score=32.30 Aligned_cols=71 Identities=13% Similarity=0.070 Sum_probs=45.0
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEE-----CCCCcEEEEEcCCeEEEEEEcCC
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFT-----PAGDVHRVKYYEETEFFIKWDGR 288 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~i-----P~g~~H~~~n~~d~~~~i~~~g~ 288 (309)
...++||..+-..-.+...+.+|++|.+++. ..+++...+.+||++=. ..-....+.+.+++.++.+....
T Consensus 97 ~~~~~~ge~I~~~g~~~~~ly~I~~G~v~v~-~~~g~~~~l~~G~~fGe~~~~~~~~~~~~v~a~~~~~l~~i~~~~ 172 (202)
T 3bpz_A 97 FEVFQPGDYIIREGTIGKKMYFIQHGVVSVL-TKGNKEMKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDN 172 (202)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEECEEEEE-CTTSCCEEEETTCEECHHHHHHCSBCSSEEEESSCEEEEEEEHHH
T ss_pred ceEECCCCEEEECCCcCCeEEEEeccEEEEE-ECCCeEEEEcCCCEeccHHHhcCCCcccEEEEeeEEEEEEEEHHH
Confidence 3456666655332233456788999999984 33556678999997632 11234567788888876555443
No 222
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=67.57 E-value=4.3 Score=33.58 Aligned_cols=49 Identities=18% Similarity=0.087 Sum_probs=36.2
Q ss_pred HHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCcceEEEEecCchh
Q 021698 29 ALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVG 81 (309)
Q Consensus 29 ~l~~~l~~~g~~v~d~g~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G 81 (309)
.|.+.|++.|++|.+.+. ++...+...+.+.+.+ ..+|.-|+--|||.|
T Consensus 25 ~l~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~----~~~DlVittGG~g~g 75 (164)
T 2is8_A 25 AIREVLAGGPFEVAAYELVPDEPPMIKKVLRLWADR----EGLDLILTNGGTGLA 75 (164)
T ss_dssp HHHHHHTTSSEEEEEEEEECSCHHHHHHHHHHHHHT----SCCSEEEEESCCSSS
T ss_pred HHHHHHHHCCCeEeEEEEcCCCHHHHHHHHHHHHhc----CCCCEEEEcCCCCCC
Confidence 466778889999999885 4566677777776653 357877777788776
No 223
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=67.55 E-value=20 Score=29.45 Aligned_cols=73 Identities=15% Similarity=0.159 Sum_probs=45.2
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CCeE---EEecCCcEEE------E-CCCCcEEEEEcCCeEEEEEE
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KGER---FDLTVGDYLF------T-PAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~~~---~~L~pGd~i~------i-P~g~~H~~~n~~d~~~~i~~ 285 (309)
...+++|...-..-.+...+.+|++|.+.+.... +++. ..+.|||++. + .....+.+.+.+++.++.+.
T Consensus 28 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~a~~~~~~~~i~ 107 (220)
T 3dv8_A 28 TQHVKKGTIIHNGNMDCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLLSASCIMRSIQFEVTIEAEKDTDLWIIP 107 (220)
T ss_dssp EEEECTTCEEEEGGGCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESGGGGGGCTTCCCCCEEEESSCEEEEEEE
T ss_pred eEEeCCCCEEECCCCCcceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeehhHHHHhCCCCCceEEEEeeeeEEEEEE
Confidence 4567777766433344567788999999984222 2333 5678999852 1 12234567777888876554
Q ss_pred cCCc
Q 021698 286 DGRW 289 (309)
Q Consensus 286 ~g~~ 289 (309)
...+
T Consensus 108 ~~~~ 111 (220)
T 3dv8_A 108 AEIY 111 (220)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 224
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=66.67 E-value=17 Score=28.42 Aligned_cols=68 Identities=15% Similarity=0.041 Sum_probs=42.2
Q ss_pred EEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCC-eEEEecCCcEEEE-----CCCCcEEEEEcCCeEEEEEEcC
Q 021698 218 VRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKG-ERFDLTVGDYLFT-----PAGDVHRVKYYEETEFFIKWDG 287 (309)
Q Consensus 218 v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~-~~~~L~pGd~i~i-----P~g~~H~~~n~~d~~~~i~~~g 287 (309)
..+++|..+-..-.+...+.+|++|.+++ ..++ ....+.+||++=. ..-..+.+.+.+++.++.+...
T Consensus 64 ~~~~~g~~i~~~G~~~~~~y~i~~G~v~~--~~~~~~~~~~~~G~~fGe~~~~~~~~~~~~v~A~~~~~~~~i~~~ 137 (154)
T 3pna_A 64 VSFIAGETVIQQGDEGDNFYVIDQGEMDV--YVNNEWATSVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRD 137 (154)
T ss_dssp EEECTTCEEECTTSCCCEEEEEEESCEEE--EETTEEEEEECTTCEECCHHHHHCCCCSSEEEESSCEEEEEEEHH
T ss_pred EEECCCCEEEeCCCCCCeEEEEEecEEEE--EECCEEEEEecCCCEeeehHhhcCCCcceEEEECcceEEEEEeHH
Confidence 45566655432223455778899999999 4444 4467899997632 2222456777788777654433
No 225
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=66.57 E-value=9.3 Score=29.02 Aligned_cols=71 Identities=17% Similarity=0.115 Sum_probs=45.3
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEEC-----CCCcEEEEEcCCeEEEEEEcCCcc
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTP-----AGDVHRVKYYEETEFFIKWDGRWD 290 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP-----~g~~H~~~n~~d~~~~i~~~g~~~ 290 (309)
..++++|..+-..-.+...+.+|++|.+++ ...+ ...+.|||++-.. .-..+.+.+.+++.++.+....+.
T Consensus 36 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~--~~~~-~~~~~~G~~~G~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~ 111 (138)
T 1vp6_A 36 ARTVPAGAVICRIGEPGDRMFFVVEGSVSV--ATPN-PVELGPGAFFGEMALISGEPRSATVSAATTVSLLSLHSADFQ 111 (138)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEESCEEE--CSSS-CEEECTTCEECHHHHHHCCCCSSCEEESSSEEEEEEEHHHHH
T ss_pred EEEeCCCCEEEeCCCCcceEEEEEeeEEEE--EeCC-cceECCCCEeeehHhccCCCceeEEEECCCEEEEEECHHHHH
Confidence 456677766533333455678899999999 4444 4688999976321 123456778888887655544433
No 226
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=65.65 E-value=1.6 Score=33.95 Aligned_cols=19 Identities=32% Similarity=0.725 Sum_probs=16.5
Q ss_pred cceEEEEecCchhhhhhhc
Q 021698 69 TTRGLVACGTGVGVAIFAN 87 (309)
Q Consensus 69 ~~~gi~~cgtG~G~~i~aN 87 (309)
-.+-+++|++|+|.|..+.
T Consensus 18 ~~kIlvvC~sG~gTS~m~~ 36 (110)
T 3czc_A 18 MVKVLTACGNGMGSSMVIK 36 (110)
T ss_dssp CEEEEEECCCCHHHHHHHH
T ss_pred CcEEEEECCCcHHHHHHHH
Confidence 3578999999999998877
No 227
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3rsm_A 3bkq_X* 3c04_A* 2fkm_X*
Probab=65.47 E-value=8 Score=37.31 Aligned_cols=45 Identities=22% Similarity=0.234 Sum_probs=37.7
Q ss_pred cEEEEEeCc--ccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHH
Q 021698 13 LKIIAGADS--FGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVG 57 (309)
Q Consensus 13 mkI~ig~D~--~g~~lk~~l~~~l~~~g~~v~d~g~~~y~~~a~~va 57 (309)
-+|+||.|. ++-.|++++.+-|.+.|.+|.|+|.-.-|.++..+-
T Consensus 49 ~~VvVG~D~R~ss~~l~~a~~~gl~a~G~~V~~~g~~pTP~l~~av~ 95 (463)
T 1p5d_X 49 PCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAAN 95 (463)
T ss_dssp CEEEEEECSCTTHHHHHHHHHHHHHTBTCEEEEEEECCHHHHHHHHH
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEeCCCChHHHHHHHH
Confidence 379999996 577999999999999999999999866666655554
No 228
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=64.88 E-value=20 Score=27.43 Aligned_cols=74 Identities=11% Similarity=0.055 Sum_probs=44.0
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CCe---EEEecCCcEEEE----CC-C-CcEEEEEcCCeEEEEEEc
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KGE---RFDLTVGDYLFT----PA-G-DVHRVKYYEETEFFIKWD 286 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~~---~~~L~pGd~i~i----P~-g-~~H~~~n~~d~~~~i~~~ 286 (309)
..++++|..+-..-.+...+.+|++|.+++.... +++ ...+.+||++-. .. . ..+.+.+.+++.++.+..
T Consensus 37 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~a~~~~~~~~i~~ 116 (154)
T 2z69_A 37 LVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAVVPSQLFRFSN 116 (154)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESCEEEECCCC-----CCEEECTTEEESGGGGGSSCSBCSSEEEESSSEEEEEEEH
T ss_pred EEEecCCCEEecCCCccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCeeccHhhccCCCCCceEEEEccceEEEEECH
Confidence 3456666655333334556788999999983111 233 257889997632 11 2 456778888888765554
Q ss_pred CCcc
Q 021698 287 GRWD 290 (309)
Q Consensus 287 g~~~ 290 (309)
..+.
T Consensus 117 ~~~~ 120 (154)
T 2z69_A 117 KAYL 120 (154)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 229
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii}
Probab=64.30 E-value=12 Score=35.91 Aligned_cols=46 Identities=26% Similarity=0.255 Sum_probs=38.9
Q ss_pred cEEEEEeCc--ccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHH
Q 021698 13 LKIIAGADS--FGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGR 58 (309)
Q Consensus 13 mkI~ig~D~--~g~~lk~~l~~~l~~~g~~v~d~g~~~y~~~a~~va~ 58 (309)
-+|+||.|. .+-.+++++.+-|.+.|++|+|+|.-.-|-++..+-.
T Consensus 38 ~~VvIG~D~R~ss~~~~~a~a~gl~~~G~~V~~~g~~pTP~~~~av~~ 85 (455)
T 2f7l_A 38 SKILVGRDVRAGGDMLVKIVEGGLLSVGVEVYDGGMAPTPALQYAVKT 85 (455)
T ss_dssp CEEEEEECSCTTHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHHHHH
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHCCCcEEEcCCCCcHHHHHHHHh
Confidence 379999996 5779999999999999999999998776766666644
No 230
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=64.02 E-value=26 Score=26.55 Aligned_cols=67 Identities=15% Similarity=0.072 Sum_probs=40.9
Q ss_pred EEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCe-EEEecCCcEEEE-----CCCCcEEEEEcCCeEEEEEEc
Q 021698 218 VRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGE-RFDLTVGDYLFT-----PAGDVHRVKYYEETEFFIKWD 286 (309)
Q Consensus 218 v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~-~~~L~pGd~i~i-----P~g~~H~~~n~~d~~~~i~~~ 286 (309)
..+++|..+-..-.+...+.+|++|.+++ ..+++ ...+.+|+++=. .....+.+.+.+++.++.+..
T Consensus 49 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~--~~~g~~~~~~~~G~~fGe~~~l~~~~~~~~~~a~~~~~v~~i~~ 121 (139)
T 3ocp_A 49 VEYGKDSCIIKEGDVGSLVYVMEDGKVEV--TKEGVKLCTMGPGKVFGELAILYNCTRTATVKTLVNVKLWAIDR 121 (139)
T ss_dssp EEECSSCEEECTTSCCCEEEEEEECCEEE--EETTEEEEEECTTCEESCHHHHHCCCCSSEEEESSCEEEEEEEH
T ss_pred EecCCCCEEEeCCCcCCEEEEEEeCEEEE--EECCEEEEEeCCCCEeccHHHHCCCCcceEEEECcceEEEEEcH
Confidence 34555554422223445678899999999 44543 468899997632 222344677777877764443
No 231
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=63.34 E-value=8.8 Score=31.81 Aligned_cols=33 Identities=24% Similarity=0.272 Sum_probs=25.5
Q ss_pred CCCCcEEEEEeCcccHH----HHHHHHHHHHhCCCcEE
Q 021698 9 APHPLKIIAGADSFGAE----LKDALVSHLRSLNIDVE 42 (309)
Q Consensus 9 ~~~~mkI~ig~D~~g~~----lk~~l~~~l~~~g~~v~ 42 (309)
..++|||.|++-..++. ..+.+++.|++.| +|.
T Consensus 8 ~~~~~kVYLAGp~~~~~~~~~~~~~i~~~l~~~G-~V~ 44 (165)
T 2khz_A 8 EQAPCSVYFCGSIRGGREDQALYARIVSRLRRYG-KVL 44 (165)
T ss_dssp SCCCCEEEEECCCSSCSHHHHHHHHHHHHHHHHS-EES
T ss_pred CCCCeEEEEECCCCCcHHHHHHHHHHHHHHHhcC-Ccc
Confidence 34668999997776542 4588999999999 884
No 232
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=63.28 E-value=20 Score=31.04 Aligned_cols=71 Identities=15% Similarity=0.079 Sum_probs=44.2
Q ss_pred EEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCC-eEEEecCCcEEEEC---CCC--cEEEEEcCCeEEEEEEcCCcc
Q 021698 218 VRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKG-ERFDLTVGDYLFTP---AGD--VHRVKYYEETEFFIKWDGRWD 290 (309)
Q Consensus 218 v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~-~~~~L~pGd~i~iP---~g~--~H~~~n~~d~~~~i~~~g~~~ 290 (309)
..+++|..+-..-.+...+.+|++|.+.+ ..++ ....+.+||++=-. .+. .+.+.+.+++.++.+....+.
T Consensus 65 ~~~~~g~~i~~~G~~~~~~y~i~~G~v~~--~~~g~~~~~l~~G~~fGe~~l~~~~~~~~tv~a~~~~~~~~i~~~~~~ 141 (291)
T 2qcs_B 65 VSFIAGETVIQQGDEGDNFYVIDQGEMDV--YVNNEWATSVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRDSYR 141 (291)
T ss_dssp EEECTTCEEECTTSBCCEEEEEEECCEEE--EETTEEEEEECTTCEECGGGGTCCCBCSSEEEESSCEEEEEEEHHHHH
T ss_pred EEECCCCEEEeCCCCCceEEEEeeeEEEE--EECCeEEEEcCCCCccchHHHhcCCCCceEEEECCCEEEEEEEhHHHH
Confidence 45556655433333455678899999999 4444 45788999976321 222 456777788887655544444
No 233
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis}
Probab=63.00 E-value=13 Score=36.21 Aligned_cols=44 Identities=27% Similarity=0.267 Sum_probs=35.6
Q ss_pred cEEEEEeCc--ccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHH
Q 021698 13 LKIIAGADS--FGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEV 56 (309)
Q Consensus 13 mkI~ig~D~--~g~~lk~~l~~~l~~~g~~v~d~g~~~y~~~a~~v 56 (309)
-+|+||.|. ++-.+++++.+-|.+.|.+|.|+|.-.-|-++..+
T Consensus 63 ~~VvVG~D~R~ss~~~~~a~a~gl~a~Gi~V~~~g~~pTP~l~~av 108 (485)
T 3uw2_A 63 DAVVVARDGRLSGPELVGALADGLRAAGVDVVDVGMVPTPVGYFAA 108 (485)
T ss_dssp CEEEEEECSCTTHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHHT
T ss_pred CEEEEEECCCcCHHHHHHHHHHHHHHCCCEEEEeCCCChHHHHHHH
Confidence 479999995 46699999999999999999999965555444433
No 234
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=62.91 E-value=7.6 Score=29.63 Aligned_cols=66 Identities=15% Similarity=0.172 Sum_probs=37.9
Q ss_pred EEEc-CCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEEC---CCCcE--EE-EEcCCeEEEEE
Q 021698 218 VRFK-AGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTP---AGDVH--RV-KYYEETEFFIK 284 (309)
Q Consensus 218 v~l~-pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP---~g~~H--~~-~n~~d~~~~i~ 284 (309)
.+++ +|..+-..-.+...+.+|++|.+++. ..+++...+.+||++=.. .+.++ .. .+.+++.++.+
T Consensus 42 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~-~~~g~~~~l~~G~~fG~~~~~~~~~~~~~~~~a~~~~~~~~i 114 (134)
T 2d93_A 42 EVVEQAGAIILEDGQELDSWYVILNGTVEIS-HPDGKVENLFMGNSFGITPTLDKQYMHGIVRTKVDDCQFVCI 114 (134)
T ss_dssp EEECSSSCEEECTTCEECEEEECCBSCEEEE-CSSSCEEEECTTCEESCCSSSCCEECCSEEEESSSSEEEEEE
T ss_pred EEecCCCCEEEeCCCCCCeEEEEEeCEEEEE-cCCCcEEEecCCCccChhHhcCCCcceeEEEEEecceEEEEE
Confidence 3455 55443222223345778999999984 335566889999976322 12233 34 55667766543
No 235
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=62.71 E-value=13 Score=32.11 Aligned_cols=38 Identities=13% Similarity=-0.017 Sum_probs=30.1
Q ss_pred cCccEEEEEEeCEEEEEEEeC-CeEEEecCCcEEEECCCCc
Q 021698 231 HTFGHDLVVLEGKKSVWNLTK-GERFDLTVGDYLFTPAGDV 270 (309)
Q Consensus 231 H~~~e~vyVl~G~l~v~~~~~-~~~~~L~pGd~i~iP~g~~ 270 (309)
+....++|+++|.+++ ..+ ++...|.+||.+++.....
T Consensus 138 ~~~~~~v~~l~G~~~v--~~~~~~~~~L~~~d~l~~~~~~~ 176 (200)
T 1yll_A 138 TASTLLLFAQQDGVAI--SLQGQPRGQLAAHDCLCAEGLQG 176 (200)
T ss_dssp CCSEEEEEESSSCEEE--EETTEEEEEECTTCEEEEESCCS
T ss_pred CCCEEEEEEccCcEEE--EcCCCceeecCCCCEEEEeCCCc
Confidence 3445688999999998 445 5789999999999976643
No 236
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii}
Probab=61.88 E-value=14 Score=35.59 Aligned_cols=45 Identities=31% Similarity=0.394 Sum_probs=37.9
Q ss_pred cEEEEEeCc--ccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHH
Q 021698 13 LKIIAGADS--FGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVG 57 (309)
Q Consensus 13 mkI~ig~D~--~g~~lk~~l~~~l~~~g~~v~d~g~~~y~~~a~~va 57 (309)
.+|+||.|. .+-.|++++.+-|.+.|.+|.|+|.-.-|-++..+-
T Consensus 42 ~~VvIG~D~R~ss~~l~~a~~~gl~~~G~~V~~~g~~pTP~l~~~v~ 88 (455)
T 1wqa_A 42 PLVVVGRDTRVSGEMLKEALISGLLSVGCDVIDVGIAPTPAVQWATK 88 (455)
T ss_dssp CEEEEEECSCTTHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHHHH
T ss_pred CeEEEEeCCCcCHHHHHHHHHHHHHHcCCeEEEeCCCChHHHHHHHH
Confidence 479999996 577999999999999999999999766666655554
No 237
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=61.02 E-value=33 Score=28.26 Aligned_cols=71 Identities=14% Similarity=-0.011 Sum_probs=45.6
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCC-eEEEecCCcEEEECC---C----CcEEEEEcCCeEEEEEEcCC
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKG-ERFDLTVGDYLFTPA---G----DVHRVKYYEETEFFIKWDGR 288 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~-~~~~L~pGd~i~iP~---g----~~H~~~n~~d~~~~i~~~g~ 288 (309)
...++||..+-..--+...+.+|++|.+++ ..++ ....+.+||++-..+ + ....+++.+++.++.+....
T Consensus 100 ~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v--~~~~~~~~~l~~G~~fGe~~~~~~~~~~~~~~v~a~~~~~l~~i~~~~ 177 (212)
T 3ukn_A 100 TSFCAPGEFLIRQGDALQAIYFVCSGSMEV--LKDNTVLAILGKGDLIGSDSLTKEQVIKTNANVKALTYCDLQYISLKG 177 (212)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEECCEEE--ESSSCEEEEECTTCEEECSCCSSSSCCBBCSEEEESSCEEEEEEEHHH
T ss_pred eEEeCCCCEEEECCCcccEEEEEEecEEEE--EECCeEEEEecCCCCcCcHHhccCCCCCcceEEEEcccEEEEEEeHHH
Confidence 456777776533223356778899999999 4444 457899999875321 1 23456777888877555443
Q ss_pred c
Q 021698 289 W 289 (309)
Q Consensus 289 ~ 289 (309)
+
T Consensus 178 f 178 (212)
T 3ukn_A 178 L 178 (212)
T ss_dssp H
T ss_pred H
Confidence 3
No 238
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=60.11 E-value=26 Score=28.46 Aligned_cols=71 Identities=15% Similarity=-0.016 Sum_probs=41.3
Q ss_pred EEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CCeE---EEecCCcEEEE---C-CCCcEEEEEcCCeEEEEEEcCCc
Q 021698 219 RFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KGER---FDLTVGDYLFT---P-AGDVHRVKYYEETEFFIKWDGRW 289 (309)
Q Consensus 219 ~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~~~---~~L~pGd~i~i---P-~g~~H~~~n~~d~~~~i~~~g~~ 289 (309)
++++|...-..-.+...+.+|++|.+++.... +++. ..+.|||++-. . ....+.+.+.+++.++.+....+
T Consensus 3 ~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~Ge~~~~~~~~~~~~~A~~~~~v~~i~~~~~ 81 (195)
T 3b02_A 3 RFARKETIYLRGEEARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGEEALEGKAYRYTAEAMTEAVVQGLEPRAM 81 (195)
T ss_dssp EECTTCEEECTTSBCCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEECGGGGTCSBCSSEEEESSSEEEEEECGGGC
T ss_pred EcCCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEechhhhCCCCceeEEEECCcEEEEEEcHHHc
Confidence 45555544222233455778999999984222 3333 47889997732 1 12345677778887765544433
No 239
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=59.32 E-value=35 Score=27.63 Aligned_cols=74 Identities=15% Similarity=0.072 Sum_probs=44.6
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CCeE---EEecCCcEEEEC----C-----CCcEEEEEcCCeEEEE
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KGER---FDLTVGDYLFTP----A-----GDVHRVKYYEETEFFI 283 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~~~---~~L~pGd~i~iP----~-----g~~H~~~n~~d~~~~i 283 (309)
..++++|...-..--+...+.+|++|.+++.... +++. ..+.|||++-.. . ...+.+.+.+++.++.
T Consensus 15 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~A~~~~~v~~ 94 (207)
T 2oz6_A 15 RRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAKVECEVAE 94 (207)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEESCTTTCC-----CBCCSEEEESSCEEEEE
T ss_pred eEEECCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcccHHHhcCCCCCCCcceEEEECCcEEEEE
Confidence 4567777665332234456788999999984222 2332 577899987332 1 1345677788888765
Q ss_pred EEcCCcc
Q 021698 284 KWDGRWD 290 (309)
Q Consensus 284 ~~~g~~~ 290 (309)
+....+.
T Consensus 95 i~~~~~~ 101 (207)
T 2oz6_A 95 ISYAKFR 101 (207)
T ss_dssp EEHHHHH
T ss_pred ECHHHHH
Confidence 5544333
No 240
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=58.66 E-value=8.8 Score=31.83 Aligned_cols=49 Identities=12% Similarity=0.215 Sum_probs=34.9
Q ss_pred HHHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCcceEEEEecCchhh
Q 021698 28 DALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVGV 82 (309)
Q Consensus 28 ~~l~~~l~~~g~~v~d~g~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G~ 82 (309)
..|.+.|++.|++|.+++. ++ ..+...+.+.+.+ .+|.-|+--|||.|-
T Consensus 30 ~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~-----~~DlVittGG~s~g~ 80 (164)
T 3pzy_A 30 PIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDD-----DVDVILTSGGTGIAP 80 (164)
T ss_dssp HHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHT-----TCSEEEEESCCSSST
T ss_pred HHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhC-----CCCEEEECCCCCCCC
Confidence 3567788889999999885 56 6676666666542 467777777777764
No 241
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=58.37 E-value=21 Score=29.21 Aligned_cols=73 Identities=14% Similarity=0.069 Sum_probs=45.8
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEE-eCCe---EEEecCCcEEEE-----CCCCcEEEEEcCCeEEEEEEcC
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNL-TKGE---RFDLTVGDYLFT-----PAGDVHRVKYYEETEFFIKWDG 287 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~-~~~~---~~~L~pGd~i~i-----P~g~~H~~~n~~d~~~~i~~~g 287 (309)
...+++|...-..-.+...+.+|++|.+++... .+++ ...+.|||++-. .....+.+.+.+++.++.+...
T Consensus 24 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~v~~i~~~ 103 (216)
T 4ev0_A 24 RRLYPQGKPIFYQGDLGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERSASAVAVEDTELLALFRE 103 (216)
T ss_dssp EEEECTTCEEECTTCBCCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCSSEEEESSSEEEEEEEHH
T ss_pred EEEeCCCCEEEeCCCCCCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcceEEEEcCCEEEEEEcHH
Confidence 456777776543334456778899999998422 2343 267899998742 1223456788888887655444
Q ss_pred Cc
Q 021698 288 RW 289 (309)
Q Consensus 288 ~~ 289 (309)
.+
T Consensus 104 ~~ 105 (216)
T 4ev0_A 104 DY 105 (216)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 242
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=58.28 E-value=22 Score=29.00 Aligned_cols=74 Identities=15% Similarity=0.102 Sum_probs=45.7
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEE-eCCe---EEEecCCcEEEEC----CC--CcEEEEEcCCeEEEEEEc
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNL-TKGE---RFDLTVGDYLFTP----AG--DVHRVKYYEETEFFIKWD 286 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~-~~~~---~~~L~pGd~i~iP----~g--~~H~~~n~~d~~~~i~~~ 286 (309)
..++++|...-..-.+...+.+|++|.+++... .+++ ...+.|||++-.. .+ ..+.+.+.+++.++.+..
T Consensus 21 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~~~~v~~i~~ 100 (210)
T 3ryp_A 21 IHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISY 100 (210)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCSSEEEESSCEEEEEEEH
T ss_pred EEEeCCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHHhcCCCCceEEEEECCcEEEEEEcH
Confidence 456777776543334456778899999998422 2333 3567899987422 22 345677788888765554
Q ss_pred CCcc
Q 021698 287 GRWD 290 (309)
Q Consensus 287 g~~~ 290 (309)
..+.
T Consensus 101 ~~~~ 104 (210)
T 3ryp_A 101 KKFR 104 (210)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4333
No 243
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=58.06 E-value=35 Score=28.21 Aligned_cols=74 Identities=14% Similarity=0.065 Sum_probs=44.8
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CCeE---EEecCCcEEEE-----CCCCcEEEEEcCCeEEEEEEcC
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KGER---FDLTVGDYLFT-----PAGDVHRVKYYEETEFFIKWDG 287 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~~~---~~L~pGd~i~i-----P~g~~H~~~n~~d~~~~i~~~g 287 (309)
...+++|...-..-.+...+.+|++|.+.+.... +++. ..+.|||++-. .....+.+.+.+++.++.+...
T Consensus 31 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~~~~~v~~i~~~ 110 (227)
T 3d0s_A 31 PVDFPRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVRAVSMDRD 110 (227)
T ss_dssp EEEECTTCEEECTTCCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCHHHHSCSCCSSEEEESSCEEEEEEEHH
T ss_pred EEEeCCCCEEEcCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeHHHcCCCCceeEEEEcccEEEEEEeHH
Confidence 3456666655332234456778999999984222 3433 47889997632 2224456788888887765544
Q ss_pred Ccc
Q 021698 288 RWD 290 (309)
Q Consensus 288 ~~~ 290 (309)
.+.
T Consensus 111 ~~~ 113 (227)
T 3d0s_A 111 ALR 113 (227)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 244
>2lci_A Protein OR36; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=57.54 E-value=6.6 Score=30.20 Aligned_cols=114 Identities=15% Similarity=0.203 Sum_probs=60.6
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCcceEEEEecCchh---hhhhhcCC
Q 021698 13 LKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVG---VAIFANKN 89 (309)
Q Consensus 13 mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~g~~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G---~~i~aNK~ 89 (309)
|||.|--.-..-+|-..+++..+..||+|-|+...| +.-..+ +.+++. ...+.-++|..--+= |-=...|.
T Consensus 1 mkililintnndelikkikkevenqgyqvrdvndsd--elkkem-kklaee---knfekiliisndkqllkemleliskl 74 (134)
T 2lci_A 1 MKILILINTNNDELIKKIKKEVENQGYQVRDVNDSD--ELKKEM-KKLAEE---KNFEKILIISNDKQLLKEMLELISKL 74 (134)
T ss_dssp CCCEEEEECSCHHHHHHHHHHTTTTTCEEEEECSHH--HHHHHH-HHHHHC---CSCCCEEEEESCHHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCcHHHHHHHHHHHHccCeeeeecCchH--HHHHHH-HHHHhh---cCcceEEEEcCcHHHHHHHHHHHHHh
Confidence 567776666777899999999999999999986532 232222 223331 344444444332221 11111222
Q ss_pred --CceEEEEeCCHHHHHHHHh-h--cCcceeeecccccCHHHHHHHHHHHhc
Q 021698 90 --PGVFATTCLTPADALNTRS-I--NNCNVLAVSGMSTSKESAVEILDTWLK 136 (309)
Q Consensus 90 --~giraa~~~~~~~A~~~r~-h--NnaNvl~~g~~~~~~~~a~~i~~~~l~ 136 (309)
+=-.--.-.|+..-.-+++ + -+-.| -+++..+.|..|+..|+.
T Consensus 75 gykvflllqdqdeneleefkrkiesqgyev----rkvtddeealkivrefmq 122 (134)
T 2lci_A 75 GYKVFLLLQDQDENELEEFKRKIESQGYEV----RKVTDDEEALKIVREFMQ 122 (134)
T ss_dssp TCCEEEEEECSCHHHHHHHHHHHHTTTCEE----EEECCHHHHHHHHHHHHH
T ss_pred CceeEEEeecCchhHHHHHHHHHHhCCeee----eecCChHHHHHHHHHHHH
Confidence 1111122234443333322 2 11111 247888999999998874
No 245
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=57.48 E-value=11 Score=32.05 Aligned_cols=73 Identities=16% Similarity=0.140 Sum_probs=43.5
Q ss_pred CCCcccC--CCCCCcEEEEEe-----------CcccHHHHHHHHHHHHh---CCCcEEEecC--CCCcchhHHHHHHhhc
Q 021698 1 MAENADA--AAPHPLKIIAGA-----------DSFGAELKDALVSHLRS---LNIDVEDLGT--SDYYSIGAEVGRRVSS 62 (309)
Q Consensus 1 ~~~~~~~--~~~~~mkI~ig~-----------D~~g~~lk~~l~~~l~~---~g~~v~d~g~--~~y~~~a~~va~~v~~ 62 (309)
||..++. ...++|||+|-+ |-.+ ..|.+.|++ .|+++.+.+. ++...+...+.+.+.+
T Consensus 1 ~a~~g~~~v~v~~~~rv~IistGdEl~~g~~~D~n~----~~L~~~L~~~~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~ 76 (189)
T 1jlj_A 1 MATEGMILTNHDHQIRVGVLTVSDSCFRNLAEDRSG----INLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDE 76 (189)
T ss_dssp ------------CCCEEEEEEECHHHHTTSSCCHHH----HHHHHHHHCTTTTCCEEEEEEEECSCHHHHHHHHHHHHHT
T ss_pred CCcCCcccccccCCCEEEEEEECCccCCCcccchHH----HHHHHHHhchhcCCcEEEEEEEeCCCHHHHHHHHHHHhhc
Confidence 4555433 334677876654 2233 346667777 7999999885 5566677777776653
Q ss_pred CCCCCCcceEEEEecCchh
Q 021698 63 SDSSETTTRGLVACGTGVG 81 (309)
Q Consensus 63 ~~~~~~~~~gi~~cgtG~G 81 (309)
..+|.-|+--|||.|
T Consensus 77 ----~~~DlVIttGGtg~g 91 (189)
T 1jlj_A 77 ----KELNLILTTGGTGFA 91 (189)
T ss_dssp ----SCCSEEEEESCCSSS
T ss_pred ----CCCCEEEEcCCCCCC
Confidence 357877888888776
No 246
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=57.06 E-value=39 Score=25.48 Aligned_cols=74 Identities=14% Similarity=0.040 Sum_probs=44.3
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CCe---EEEecCCcEEEEC---CC--CcEEEEEcCCeEEEEEEcC
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KGE---RFDLTVGDYLFTP---AG--DVHRVKYYEETEFFIKWDG 287 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~~---~~~L~pGd~i~iP---~g--~~H~~~n~~d~~~~i~~~g 287 (309)
..++++|...-..-.+...+.+|++|.+++.... +++ ...+.+|+++-.. .+ ..+.+.+.+++.++.+...
T Consensus 30 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~~~~i~~~ 109 (149)
T 2pqq_A 30 EVTLARGDTLFHEGDPGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIGELSLFDPGPRTATGTALTEVKLLALGHG 109 (149)
T ss_dssp EEEECTTCEEECTTSEECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEESGGGGTSCEECSSEEEESSCEEEEEEEGG
T ss_pred EEEeCCCCEEECCCCCCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEechHHhcCCCCcceEEEEccceEEEEEeHH
Confidence 4566777665332233456778999999984221 233 3578899976321 12 2345677778877766555
Q ss_pred Ccc
Q 021698 288 RWD 290 (309)
Q Consensus 288 ~~~ 290 (309)
.+.
T Consensus 110 ~~~ 112 (149)
T 2pqq_A 110 DLQ 112 (149)
T ss_dssp GHH
T ss_pred HHH
Confidence 444
No 247
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=56.93 E-value=57 Score=24.13 Aligned_cols=36 Identities=19% Similarity=0.160 Sum_probs=25.3
Q ss_pred CCCCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEe
Q 021698 7 AAAPHPLKIIAGADSFGAELKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 7 ~~~~~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~ 44 (309)
+...+++||.|..|+.. ..+.+++.|++.||+|.-+
T Consensus 2 s~~~~~~~ilivdd~~~--~~~~l~~~L~~~g~~v~~~ 37 (136)
T 3hdv_A 2 SLVAARPLVLVVDDNAV--NREALILYLKSRGIDAVGA 37 (136)
T ss_dssp -----CCEEEEECSCHH--HHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCCeEEEECCCHH--HHHHHHHHHHHcCceEEEe
Confidence 33345678999999854 5678889999999999853
No 248
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=56.61 E-value=46 Score=28.10 Aligned_cols=72 Identities=17% Similarity=0.113 Sum_probs=44.4
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CCeE---EEecCCcEEE--ECCCCcEEEEEcCCeEEEEEEcCC
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KGER---FDLTVGDYLF--TPAGDVHRVKYYEETEFFIKWDGR 288 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~~~---~~L~pGd~i~--iP~g~~H~~~n~~d~~~~i~~~g~ 288 (309)
..++++|...-..-.+...+.+|++|.+++.... +|+. ..+.|||++- +.....+.+.+.+++.++.+....
T Consensus 34 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~l~~~~~~~~~A~~~~~v~~i~~~~ 111 (250)
T 3e6c_C 34 IRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATAMEPTRTCWFSEKS 111 (250)
T ss_dssp EEEECTTCEEECTTCCCCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECCCSCCSCCEEEEESSSEEEEEECHHH
T ss_pred EEEECCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEeeecCCCCceEEEEcccEEEEEEcHHH
Confidence 4566777665333334456788999999984222 3333 4678999773 222256677888888876554433
No 249
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=56.49 E-value=14 Score=28.35 Aligned_cols=31 Identities=16% Similarity=0.232 Sum_probs=23.5
Q ss_pred CCCcEEEEEeCcc---cHHHHHHHHHHHHhCCCc
Q 021698 10 PHPLKIIAGADSF---GAELKDALVSHLRSLNID 40 (309)
Q Consensus 10 ~~~mkI~ig~D~~---g~~lk~~l~~~l~~~g~~ 40 (309)
.+++||++.|+.. ..=++..|++.+++.|++
T Consensus 16 ~~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~ 49 (110)
T 3czc_A 16 GSMVKVLTACGNGMGSSMVIKMKVENALRQLGVS 49 (110)
T ss_dssp --CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCC
Confidence 3456899999973 225677999999999987
No 250
>1v7r_A Hypothetical protein PH1917; ntpase, structural genomics, riken structural genomics/prote initiative, RSGI, hydrolase; HET: CIT; 1.40A {Pyrococcus horikoshii} SCOP: c.51.4.1 PDB: 2dvn_A* 2dvo_A* 2dvp_A 2ehk_A 2zti_A 2e5x_A*
Probab=56.35 E-value=14 Score=31.63 Aligned_cols=78 Identities=13% Similarity=0.138 Sum_probs=53.0
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecC-------CCCcchhHHHHHHhhcCCCCCCcceEEEEecCchhhhhh
Q 021698 13 LKIIAGADSFGAELKDALVSHLRSLNIDVEDLGT-------SDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVGVAIF 85 (309)
Q Consensus 13 mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~g~-------~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G~~i~ 85 (309)
|||++++-..| .+ +++++.|...|++|+...- .++.+.|..=|+.+.+ ....-++.+-||+=+. +
T Consensus 1 mkiv~aT~N~~-K~-~E~~~il~~~~i~v~~~~~~~~e~~g~tf~enA~~KA~~~~~-----~~g~p~laDDSGL~vd-A 72 (186)
T 1v7r_A 1 MKIFFITSNPG-KV-REVANFLGTFGIEIVQLKHEYPEIQAEKLEDVVDFGISWLKG-----KVPEPFMIEDSGLFIE-S 72 (186)
T ss_dssp CEEEEECSCHH-HH-HHHHHHHHTTTCEEEEECCCCCCCCCSSHHHHHHHHHHHHTT-----TSCSSEEEEEEEEEEG-G
T ss_pred CeEEEEcCCHH-HH-HHHHHHhhhcCcEEEECCCCCCCCCCCCHHHHHHHHHHHHHH-----HHCCCeEecCcEEEEe-e
Confidence 67888876543 33 5678888888999886421 1455566677777765 2234588999987665 4
Q ss_pred hcCCCceEEEEeCCHHHHHHH
Q 021698 86 ANKNPGVFATTCLTPADALNT 106 (309)
Q Consensus 86 aNK~~giraa~~~~~~~A~~~ 106 (309)
.|-.||| ++|+.+
T Consensus 73 L~G~PGv--------ySar~~ 85 (186)
T 1v7r_A 73 LKGFPGV--------YSSYVY 85 (186)
T ss_dssp GTTTBGG--------GHHHHH
T ss_pred cCCCCcc--------hhHHHH
Confidence 5999998 566665
No 251
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=56.14 E-value=45 Score=28.59 Aligned_cols=74 Identities=14% Similarity=0.069 Sum_probs=45.5
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CCe---EEEecCCcEEEEC----C--CCcEEEEEcCCeEEEEEEc
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KGE---RFDLTVGDYLFTP----A--GDVHRVKYYEETEFFIKWD 286 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~~---~~~L~pGd~i~iP----~--g~~H~~~n~~d~~~~i~~~ 286 (309)
..++++|..+-..--+...+.+|++|.+++.... +++ ...+.|||++-.. . .....+.+.+++.++.+..
T Consensus 71 ~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~Ge~~~~~~~~~~~~~~~A~~~~~l~~i~~ 150 (260)
T 3kcc_A 71 IHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISY 150 (260)
T ss_dssp EEEECTTCEEECTTCBCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCCSEEEESSCEEEEEEEH
T ss_pred EEEECCCCEEECCCCcCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehHHhCCCCCCceEEEECCCeEEEEEcH
Confidence 4566777665333334557788999999984222 333 3577899987422 1 2345677888888775554
Q ss_pred CCcc
Q 021698 287 GRWD 290 (309)
Q Consensus 287 g~~~ 290 (309)
..+.
T Consensus 151 ~~~~ 154 (260)
T 3kcc_A 151 KKFR 154 (260)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4333
No 252
>4hjh_A Phosphomannomutase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: SEP G6Q; 2.10A {Brucella melitensis BV}
Probab=55.76 E-value=21 Score=34.54 Aligned_cols=46 Identities=9% Similarity=0.057 Sum_probs=38.4
Q ss_pred CcEEEEEeCc--ccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHH
Q 021698 12 PLKIIAGADS--FGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVG 57 (309)
Q Consensus 12 ~mkI~ig~D~--~g~~lk~~l~~~l~~~g~~v~d~g~~~y~~~a~~va 57 (309)
..+|+||.|. .+-.+++++.+-|.+.|.+|+|+|.-.-|-++..+-
T Consensus 49 ~~~VvVG~D~R~ss~~~~~a~~~gl~a~Gi~V~~~g~~pTP~l~fav~ 96 (481)
T 4hjh_A 49 GDKVFVGRDLRPSSPDIAALAMGAIEDAGFTPVNCGVLPTPALSYYAM 96 (481)
T ss_dssp TCEEEEEECSSTTHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHHHH
T ss_pred CCeEEEeecCCcCHHHHHHHHHHHHHHCCCEEEEeCCcCcHHHHHHHH
Confidence 3589999995 677999999999999999999999876666666553
No 253
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=55.08 E-value=84 Score=27.67 Aligned_cols=118 Identities=19% Similarity=0.233 Sum_probs=72.0
Q ss_pred CCcEEEEEe--CcccH-HHHHHHHHHHHhCCCc------EEEecCCCCcchhHHHHHHhhcCCCCCCcceEEEEecCchh
Q 021698 11 HPLKIIAGA--DSFGA-ELKDALVSHLRSLNID------VEDLGTSDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVG 81 (309)
Q Consensus 11 ~~mkI~ig~--D~~g~-~lk~~l~~~l~~~g~~------v~d~g~~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G 81 (309)
+..||.|.. +|-.+ ..++-+++.|++.||. +.-.-.+.-+.-....++.+.+ ...| .|+..+|-..
T Consensus 7 ~~~~igi~q~~~hp~ld~~~~G~~~~L~~~G~~~g~nv~~~~~~a~gd~~~~~~~~~~l~~----~~~D-lIiai~t~aa 81 (302)
T 3lkv_A 7 KTAKVAVSQIVEHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQFVG----ENPD-VLVGIATPTA 81 (302)
T ss_dssp CCEEEEEEESCCCHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHHHT----TCCS-EEEEESHHHH
T ss_pred CCceEEEEEeecChhHHHHHHHHHHHHHhhCcccCCcEEEEEEeCCCCHHHHHHHHHHHHh----cCCc-EEEEcCCHHH
Confidence 556888874 89887 5688899999999974 3222333334456667777776 4555 4555565443
Q ss_pred hhhh--hcCCCceEEEEeCCHHHHHHHHh--hcCcceeeecccccCHHHHHHHHHHHh
Q 021698 82 VAIF--ANKNPGVFATTCLTPADALNTRS--INNCNVLAVSGMSTSKESAVEILDTWL 135 (309)
Q Consensus 82 ~~i~--aNK~~giraa~~~~~~~A~~~r~--hNnaNvl~~g~~~~~~~~a~~i~~~~l 135 (309)
.+++ ..++|=| ..-+.|+..+.+... +++.||-......- .+.-.+++...+
T Consensus 82 ~a~~~~~~~iPVV-f~~v~dp~~~~l~~~~~~~g~nvtGv~~~~~-~~~~l~l~~~l~ 137 (302)
T 3lkv_A 82 QALVSATKTIPIV-FTAVTDPVGAKLVKQLEQPGKNVTGLSDLSP-VEQHVELIKEIL 137 (302)
T ss_dssp HHHHHHCSSSCEE-EEEESCTTTTTSCSCSSSCCSSEEEEECCCC-HHHHHHHHHHHS
T ss_pred HHHHhhcCCCCeE-EEecCCcchhhhcccccCCCCcEEEEECCcC-HHHHHHHHHHhC
Confidence 3332 2356644 445688888877654 46678776654443 334445555554
No 254
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=54.92 E-value=63 Score=24.02 Aligned_cols=36 Identities=14% Similarity=0.140 Sum_probs=25.7
Q ss_pred CCCCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEe
Q 021698 7 AAAPHPLKIIAGADSFGAELKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 7 ~~~~~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~ 44 (309)
+...+++||.|..|+. ...+.|++.|+..||+|.-+
T Consensus 2 ~~~~~~~~iLivdd~~--~~~~~l~~~L~~~g~~v~~~ 37 (142)
T 3cg4_A 2 SLAEHKGDVMIVDDDA--HVRIAVKTILSDAGFHIISA 37 (142)
T ss_dssp ----CCCEEEEECSCH--HHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCCeEEEEcCCH--HHHHHHHHHHHHCCeEEEEe
Confidence 3445678999998884 45678888999999988743
No 255
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=54.88 E-value=40 Score=24.83 Aligned_cols=35 Identities=17% Similarity=0.041 Sum_probs=27.0
Q ss_pred CCCCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021698 7 AAAPHPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 7 ~~~~~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d 43 (309)
+.+.+++||.|..|+.. ..+.+.+.|++.||+|.-
T Consensus 2 ~~~~~~~~ilivdd~~~--~~~~l~~~L~~~g~~v~~ 36 (130)
T 3eod_A 2 TQPLVGKQILIVEDEQV--FRSLLDSWFSSLGATTVL 36 (130)
T ss_dssp -CTTTTCEEEEECSCHH--HHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCeEEEEeCCHH--HHHHHHHHHHhCCceEEE
Confidence 34456779999999864 467888999999999874
No 256
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=54.81 E-value=19 Score=33.64 Aligned_cols=26 Identities=35% Similarity=0.417 Sum_probs=23.0
Q ss_pred EEEecCCcEEEECCCCcEEEEEcCCe
Q 021698 254 RFDLTVGDYLFTPAGDVHRVKYYEET 279 (309)
Q Consensus 254 ~~~L~pGd~i~iP~g~~H~~~n~~d~ 279 (309)
+++=+|||+++++||..|++.|.|-+
T Consensus 280 r~~QkpGd~Vi~~PgayH~v~n~G~~ 305 (332)
T 2xxz_A 280 RFVQRPGDLVWINAGTVHWVQATGWC 305 (332)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSSE
T ss_pred EEEECCCCEEEECCCceEEEEeccee
Confidence 46678999999999999999999954
No 257
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=54.15 E-value=26 Score=29.22 Aligned_cols=77 Identities=10% Similarity=-0.037 Sum_probs=44.7
Q ss_pred EEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCC-eEEEecCCcEEE----E-CCCCcEEEEEcCCeEEEEEEcCCccc
Q 021698 218 VRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKG-ERFDLTVGDYLF----T-PAGDVHRVKYYEETEFFIKWDGRWDM 291 (309)
Q Consensus 218 v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~-~~~~L~pGd~i~----i-P~g~~H~~~n~~d~~~~i~~~g~~~i 291 (309)
..+++|..+-..--+...+.+|++|++++. ..++ ....+.+||++= + ..-....+.+.+++.++.+....+.-
T Consensus 151 ~~~~~g~~i~~~g~~~~~~y~I~~G~v~v~-~~~~~~~~~l~~g~~fGe~~~~~~~~~~~~v~a~~~~~~~~i~~~~f~~ 229 (246)
T 3of1_A 151 KIYQPGETIIREGDQGENFYLIEYGAVDVS-KKGQGVINKLKDHDYFGEVALLNDLPRQATVTATKRTKVATLGKSGFQR 229 (246)
T ss_dssp EEECTTCEEECTTSBCCEEEEEEECEEEEE-ETTTEEEEEEETTCEECHHHHHHTCBCSSEEEESSCEEEEEEEHHHHHH
T ss_pred EEeCCCCEEEeCCCcCCEEEEEEecEEEEE-EcCCceEEEcCCCCcccHHHHhCCCCcccEEEECCCEEEEEEeHHHHHH
Confidence 344555443222223456778999999994 2222 567899999762 1 11123356777788877665555554
Q ss_pred ccch
Q 021698 292 FFDE 295 (309)
Q Consensus 292 ~~~~ 295 (309)
.+.+
T Consensus 230 ll~~ 233 (246)
T 3of1_A 230 LLGP 233 (246)
T ss_dssp HCTT
T ss_pred Hhcc
Confidence 4443
No 258
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=53.62 E-value=22 Score=32.14 Aligned_cols=101 Identities=18% Similarity=0.217 Sum_probs=63.2
Q ss_pred CCcEEEEEeCcccH-----HHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCcceEEEE----ecCchh
Q 021698 11 HPLKIIAGADSFGA-----ELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSETTTRGLVA----CGTGVG 81 (309)
Q Consensus 11 ~~mkI~ig~D~~g~-----~lk~~l~~~l~~~g~~v~d~g~~~y~~~a~~va~~v~~~~~~~~~~~gi~~----cgtG~G 81 (309)
+-.|+=|-+|+-=. ++ -+..+.|.+.|++|+.+-++| ..+|+++.+. | + ..|+- =|||+|
T Consensus 104 ~~iKlEv~~d~~~llpD~~~t-v~aa~~L~~~Gf~Vlpy~~dd-----~~~akrl~~~---G-~-~aVmPlg~pIGsG~G 172 (265)
T 1wv2_A 104 NLVKLEVLADQKTLFPNVVET-LKAAEQLVKDGFDVMVYTSDD-----PIIARQLAEI---G-C-IAVMPLAGLIGSGLG 172 (265)
T ss_dssp CEEEECCBSCTTTCCBCHHHH-HHHHHHHHTTTCEEEEEECSC-----HHHHHHHHHS---C-C-SEEEECSSSTTCCCC
T ss_pred CeEEEEeecCccccCcCHHHH-HHHHHHHHHCCCEEEEEeCCC-----HHHHHHHHHh---C-C-CEEEeCCccCCCCCC
Confidence 34577777776421 22 223455778899999754433 4556666551 2 2 23333 277877
Q ss_pred hhh-------hh-cCCCceEEEEeCCHHHHHHHHhhcCcceeeecccccC
Q 021698 82 VAI-------FA-NKNPGVFATTCLTPADALNTRSINNCNVLAVSGMSTS 123 (309)
Q Consensus 82 ~~i-------~a-NK~~giraa~~~~~~~A~~~r~hNnaNvl~~g~~~~~ 123 (309)
++- .. -++|=|-.+=+.++.+|..+.+. ++.-+.+|..++.
T Consensus 173 i~~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~AmeL-GAdgVlVgSAI~~ 221 (265)
T 1wv2_A 173 ICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMEL-GCEAVLMNTAIAH 221 (265)
T ss_dssp CSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHH-TCSEEEESHHHHT
T ss_pred cCCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHHc-CCCEEEEChHHhC
Confidence 722 11 27787777788888888888885 7777778888776
No 259
>3tqu_A Non-canonical purine NTP pyrophosphatase; HAM1 protein, hydrolase; HET: MSE; 1.90A {Coxiella burnetii}
Probab=53.40 E-value=2.4 Score=36.93 Aligned_cols=74 Identities=22% Similarity=0.317 Sum_probs=50.1
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEE---ecCC-------CCcchhHHHHHHhhcCCCCCCcceEEEEecCchhh
Q 021698 13 LKIIAGADSFGAELKDALVSHLRSLNIDVED---LGTS-------DYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVGV 82 (309)
Q Consensus 13 mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d---~g~~-------~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G~ 82 (309)
+||++++--.| . -+++++.|...|++|+- ++.. +|.+.|..=|+.+.+ ....-++.+-||+=+
T Consensus 5 ~~iv~aT~N~~-K-~~E~~~iL~~~~i~v~~~~~~~~~ei~E~g~tf~eNA~~KA~~~~~-----~~g~pvlaDDSGL~v 77 (203)
T 3tqu_A 5 LEIVLASQNSS-K-LAEMQELLRDLEIKFIPQTEFSVPDIEETGSTFVENAIIKARHAAK-----QTGLPALADDSGLTI 77 (203)
T ss_dssp EEEEECCCCHH-H-HHHHHHHTTTSSEEEEEGGGGTCCCCCCCCSSHHHHHHHHHHHHHH-----HHSSCEEEEEEEEEE
T ss_pred CEEEEEECCHH-H-HHHHHHHhhhcCcEEEEhhhcCCCCCCCCCCCHHHHHHHHHHHHHH-----HHCcCEEEeccEEEE
Confidence 47888886643 2 35677888888999984 4321 345556666666554 223558889998877
Q ss_pred hhhhcCCCceEE
Q 021698 83 AIFANKNPGVFA 94 (309)
Q Consensus 83 ~i~aNK~~gira 94 (309)
. +.|-.|||+.
T Consensus 78 d-AL~G~PGvyS 88 (203)
T 3tqu_A 78 A-ALNSAPGVFS 88 (203)
T ss_dssp G-GGTTCBGGGT
T ss_pred h-hhCCCCccee
Confidence 6 7799999964
No 260
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=53.20 E-value=56 Score=26.99 Aligned_cols=71 Identities=10% Similarity=-0.006 Sum_probs=44.0
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CCe---EEEecCCcEEEEC-----CCCcEEEEEcCCeEEEEEEcC
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KGE---RFDLTVGDYLFTP-----AGDVHRVKYYEETEFFIKWDG 287 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~~---~~~L~pGd~i~iP-----~g~~H~~~n~~d~~~~i~~~g 287 (309)
...+++|...-..-.+...+.+|++|.+++.... +++ ...+.|||++-.. ....+.+.+.+++.++.+...
T Consensus 31 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~v~~i~~~ 110 (231)
T 3e97_A 31 ERNFQPDELVVEQDAEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVGETAVLAHQERSASVRALTPVRTLMLHRE 110 (231)
T ss_dssp EEEECTTCBCCCTTCTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEESTTTTTCCCCCCEEEEESSCEEEEEECHH
T ss_pred EEEECCCCEEEeCCCCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEeeHHHhCCCCceEEEEECCcEEEEEEeHH
Confidence 5677888776444445567888999999984222 232 3578899976422 223456677778777654433
No 261
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=52.57 E-value=59 Score=27.12 Aligned_cols=77 Identities=9% Similarity=-0.076 Sum_probs=45.9
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CCe---EEEecCCcEEEE----CCC--CcEEEEEcCCeEEEEEEc
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KGE---RFDLTVGDYLFT----PAG--DVHRVKYYEETEFFIKWD 286 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~~---~~~L~pGd~i~i----P~g--~~H~~~n~~d~~~~i~~~ 286 (309)
..++++|..+-..-.+...+.+|++|.+++.... +++ ...+.|||++-. ... ..+.+.+.+++.++.+..
T Consensus 45 ~~~~~~ge~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG~~~~~~~~~~~~~~~~A~~~~~v~~i~~ 124 (232)
T 1zyb_A 45 FIKHKAGETIIKSGNPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAHTEVHTVCISK 124 (232)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEECGGGGSSSCCBCSSEEEESSCEEEEEEEH
T ss_pred EEEECCCCEEECCCCcccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeeeehHHhCCCCCCceEEEEccceEEEEEEH
Confidence 3456666655333334456788999999984211 222 247789997632 222 456788888888876655
Q ss_pred CCccccc
Q 021698 287 GRWDMFF 293 (309)
Q Consensus 287 g~~~i~~ 293 (309)
..+.-.+
T Consensus 125 ~~~~~l~ 131 (232)
T 1zyb_A 125 AFVLSDL 131 (232)
T ss_dssp HHHHHTG
T ss_pred HHHHHHh
Confidence 4444333
No 262
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=52.39 E-value=79 Score=24.44 Aligned_cols=69 Identities=7% Similarity=-0.099 Sum_probs=40.0
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeE---EEecCCcEEEE-----CCCCcEEEEEcCCeEEEEEE
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGER---FDLTVGDYLFT-----PAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~---~~L~pGd~i~i-----P~g~~H~~~n~~d~~~~i~~ 285 (309)
...+++|..+-..--+...+.+|++|.+++....+++. ..+.+||++=. .....+.+.+.+++.++.+.
T Consensus 63 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~g~~~~~~~~~~G~~fGe~~~~~~~~~~~~v~A~~~~~~~~i~ 139 (161)
T 3idb_B 63 EKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFGELALMYNTPRAATITATSPGALWGLD 139 (161)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEESEEEEEEEETTEEEEEEEEESCCEECGGGGTCCCCCSSEEEESSSEEEEEEE
T ss_pred eeEeCCCCEEEeCCCCCcEEEEEEeCEEEEEEcCCCCeEEEEEcCCCCEechHHHHcCCCcccEEEECCCeEEEEEe
Confidence 34556665543222344567889999999853223333 46789996531 11223456777777765443
No 263
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=51.67 E-value=18 Score=30.21 Aligned_cols=73 Identities=8% Similarity=-0.065 Sum_probs=46.0
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEE-----ECCCCcEEEEEcCCeEEEEEEcCCcc
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLF-----TPAGDVHRVKYYEETEFFIKWDGRWD 290 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~-----iP~g~~H~~~n~~d~~~~i~~~g~~~ 290 (309)
...+++|..+-..-.+...+.+|++|.+++. ..+.....+.+||++- ...-....+.+.+++.++.+....+.
T Consensus 32 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~v~-~~~~~~~~~~~g~~fGe~~l~~~~~~~~tv~a~~~~~~~~i~~~~~~ 109 (246)
T 3of1_A 32 EKSVPKGATIIKQGDQGDYFYVVEKGTVDFY-VNDNKVNSSGPGSSFGELALMYNSPRAATVVATSDCLLWALDRLTFR 109 (246)
T ss_dssp EEEECTTCEEECTTCCCCEEEEEEECCEEEE-STTSCCEEECTTCEECHHHHHHTCCCSSEEEESSCEEEEEEEHHHHH
T ss_pred eEEECCCCEEEecCCCCCEEEEEEeeEEEEE-ECCEEEEecCCCCeeehhHHhcCCCCCcEEEECCCeEEEEEEhHHHH
Confidence 3456666655333345567888999999993 2344557899999763 12223346778888887765544443
No 264
>1b78_A Pyrophosphatase; structural genomics, hyperthermal protein; 2.20A {Methanocaldococcus jannaschii} SCOP: c.51.4.1 PDB: 2mjp_A*
Probab=50.77 E-value=6.7 Score=33.79 Aligned_cols=80 Identities=15% Similarity=0.161 Sum_probs=51.1
Q ss_pred CCcEEEEEeCcccHHHHHHHHHHHHhCC-CcEEEecCC------CCcchhHHHHHHhhcCCCCCCcceEEEEecCchhhh
Q 021698 11 HPLKIIAGADSFGAELKDALVSHLRSLN-IDVEDLGTS------DYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVGVA 83 (309)
Q Consensus 11 ~~mkI~ig~D~~g~~lk~~l~~~l~~~g-~~v~d~g~~------~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G~~ 83 (309)
.+|||++++-..| . -+++++.|...| ++|+.+..+ ++.+.|..=|+.+.+ ....-++.+-||+=+.
T Consensus 7 ~~m~iv~aT~N~~-K-~~E~~~iL~~~~~i~v~~~~~~~~E~~~tf~enA~~KA~~a~~-----~~g~p~laDDSGL~vd 79 (193)
T 1b78_A 7 EIMKIYFATGNPN-K-IKEANIILKDLKDVEIEQIKISYPEIQGTLEEVAEFGAKWVYN-----ILKKPVIVEDSGFFVE 79 (193)
T ss_dssp ---CEEEECSCHH-H-HHHHHHHTTTCTTCCEEEECCCCCCBSSCHHHHHHHHHHHHHH-----HHCSCEEEEEEEEEEG
T ss_pred CccEEEEEcCCHH-H-HHHHHHHhcccCCeEEEECCCCCCCCCCCHHHHHHHHHHHHHH-----HHCCCEEEEcCEEEEh
Confidence 3578999886644 2 356778888876 999876521 344555555666554 1223478899987665
Q ss_pred hhhcCCCceEEEEeCCHHHHHHH
Q 021698 84 IFANKNPGVFATTCLTPADALNT 106 (309)
Q Consensus 84 i~aNK~~giraa~~~~~~~A~~~ 106 (309)
+.|-.||| |+|+.+
T Consensus 80 -AL~G~PGv--------ySar~~ 93 (193)
T 1b78_A 80 -ALNGFPGT--------YSKFVQ 93 (193)
T ss_dssp -GGTTCEET--------THHHHH
T ss_pred -hcCCCCcc--------cchHHH
Confidence 45999998 566665
No 265
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=50.60 E-value=42 Score=27.28 Aligned_cols=71 Identities=17% Similarity=0.057 Sum_probs=42.9
Q ss_pred EEEcCCCcCCccccCc--cEEEEEEeCEEEEEEEe-CCeE---EEecCCcEEEE----CCCCcEEEEEcCCeEEEEEEcC
Q 021698 218 VRFKAGSVEPAHHHTF--GHDLVVLEGKKSVWNLT-KGER---FDLTVGDYLFT----PAGDVHRVKYYEETEFFIKWDG 287 (309)
Q Consensus 218 v~l~pG~~~p~H~H~~--~e~vyVl~G~l~v~~~~-~~~~---~~L~pGd~i~i----P~g~~H~~~n~~d~~~~i~~~g 287 (309)
..+++|...-..-.+. ..+.+|++|.+.+.... +++. ..+.|||++-. .....+.+.+.+++.++.+ ..
T Consensus 8 ~~~~~g~~i~~~g~~~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A~~~~~v~~i-~~ 86 (202)
T 2zcw_A 8 VSFKAGDVILYPGVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEAATDVRLEPL-PE 86 (202)
T ss_dssp EEECTTCEEECSBSCCTTCCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEESSCEEEEEC-CS
T ss_pred EEECCCCEEECCCCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEEcccEEEEEE-hH
Confidence 4566666553322334 55788999999984222 3333 46889997632 2223456777888877655 44
Q ss_pred Cc
Q 021698 288 RW 289 (309)
Q Consensus 288 ~~ 289 (309)
.+
T Consensus 87 ~~ 88 (202)
T 2zcw_A 87 NP 88 (202)
T ss_dssp SC
T ss_pred hc
Confidence 43
No 266
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=50.28 E-value=25 Score=28.67 Aligned_cols=71 Identities=14% Similarity=0.093 Sum_probs=43.5
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCC-eEEEecCCcEEEE-----CCCCcEEEEEcCCeEEEEEEcCC
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKG-ERFDLTVGDYLFT-----PAGDVHRVKYYEETEFFIKWDGR 288 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~-~~~~L~pGd~i~i-----P~g~~H~~~n~~d~~~~i~~~g~ 288 (309)
...++||..+-..-.+...+.+|++|.+++. ..++ ....+.+||++=. .......+.+.+++.++.+....
T Consensus 96 ~~~~~~ge~I~~~G~~~~~ly~I~~G~v~~~-~~~g~~~~~l~~G~~fGe~~~~~~~~~~~~~~a~~~~~l~~i~~~~ 172 (198)
T 2ptm_A 96 FEVFQPADYVIQEGTFGDRMFFIQQGIVDII-MSDGVIATSLSDGSYFGEICLLTRERRVASVKCETYCTLFSLSVQH 172 (198)
T ss_dssp EEEECTTCEEECTTSCCSEEEEEEECCEEEE-CTTSCEEEEECTTCEESCHHHHHSSCCSSEEEESSCEEEEEEEHHH
T ss_pred ceeeCCCCEEEECCCcCcEEEEEEeCEEEEE-ecCCeEEEEecCCCEechHHHcCCCccceEEEEeeEEEEEEEeHHH
Confidence 3456666655322233456788999999983 1233 4578999997621 12234567788888876554443
No 267
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=50.23 E-value=32 Score=28.39 Aligned_cols=74 Identities=12% Similarity=0.174 Sum_probs=46.4
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CCeE---EEecCCcEEEE----CC--CCcEEEEEcCCeEEEEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KGER---FDLTVGDYLFT----PA--GDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~~~---~~L~pGd~i~i----P~--g~~H~~~n~~d~~~~i~~ 285 (309)
...++++|...-..-.+...+.+|++|.+++.... +++. ..+.|||++-. .. ...+.+.+.+++.++.+.
T Consensus 23 ~~~~~~~g~~i~~~G~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~A~~~~~v~~i~ 102 (213)
T 1o5l_A 23 KVIVFRKGEIVKHQDDPIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQIIASGFIFSSEPRFPVNVVAGENSKILSIP 102 (213)
T ss_dssp EEEEECTTCEEECTTCBCCEEEEEEESCEEEEEECTTSCEEEEEEECSSEESSGGGTTSSSCBCSSEEEESSSEEEEEEE
T ss_pred EEEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEeeeHHHhcCCCCceEEEEEccceEEEEEe
Confidence 35677777766443344566788999999984222 3433 46889997632 11 245577888888877555
Q ss_pred cCCc
Q 021698 286 DGRW 289 (309)
Q Consensus 286 ~g~~ 289 (309)
...+
T Consensus 103 ~~~~ 106 (213)
T 1o5l_A 103 KEVF 106 (213)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 268
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=50.18 E-value=53 Score=27.29 Aligned_cols=73 Identities=12% Similarity=0.037 Sum_probs=44.8
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CCe---EEEecCCcEEEE-----CCCCcEEEEEcCCeEEEEEEcC
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KGE---RFDLTVGDYLFT-----PAGDVHRVKYYEETEFFIKWDG 287 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~~---~~~L~pGd~i~i-----P~g~~H~~~n~~d~~~~i~~~g 287 (309)
..++++|..+-..-.+...+.+|++|.+++.... +++ ...+.|||++-. .....+.+.+.+++.++.+...
T Consensus 36 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~a~~~~~v~~i~~~ 115 (237)
T 3fx3_A 36 WRSYDRGETLFLQEEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESFGEAVALRNTPYPVSAEAVTPCEVMHIPSP 115 (237)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEECHHHHHHTCCCSSEEEESSSEEEEEEEHH
T ss_pred EEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEechHHHhcCCCCCceEEECCceEEEEEcHH
Confidence 4566777665333334557788999999984222 333 256789997732 2223456778888887655544
Q ss_pred Cc
Q 021698 288 RW 289 (309)
Q Consensus 288 ~~ 289 (309)
.+
T Consensus 116 ~~ 117 (237)
T 3fx3_A 116 VF 117 (237)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 269
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=49.87 E-value=14 Score=31.62 Aligned_cols=49 Identities=20% Similarity=0.085 Sum_probs=34.9
Q ss_pred HHHHHHHhCCCc--EEEecC--CCCcchhHHHHHHhhcCCCCCCcceEEEEecCchh
Q 021698 29 ALVSHLRSLNID--VEDLGT--SDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVG 81 (309)
Q Consensus 29 ~l~~~l~~~g~~--v~d~g~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G 81 (309)
.|.+.|++.|++ +.+.+. ++...+...+.+.+.+ ..+|.-|+--|||.|
T Consensus 27 ~L~~~L~~~G~~~~v~~~~iV~Dd~~~I~~al~~a~~~----~~~DlVitTGGtg~g 79 (195)
T 1di6_A 27 ALEEWLTSALTTPFELETRLIPDEQAIIEQTLCELVDE----MSCHLVLTTGGTGPA 79 (195)
T ss_dssp HHHHHHHHHBCSCEEEEEEEEESCHHHHHHHHHHHHHT----SCCSEEEEESCCSSS
T ss_pred HHHHHHHHcCCCCceEEEEEeCCCHHHHHHHHHHHHhc----CCCCEEEECCCCCCC
Confidence 466677888998 677664 4566677777776654 457888888888876
No 270
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=49.70 E-value=16 Score=30.77 Aligned_cols=80 Identities=11% Similarity=0.027 Sum_probs=50.7
Q ss_pred HHHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCcceEEEEecCchhhhhhhcCCCceEEEEeCCHHHHHH
Q 021698 28 DALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVGVAIFANKNPGVFATTCLTPADALN 105 (309)
Q Consensus 28 ~~l~~~l~~~g~~v~d~g~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G~~i~aNK~~giraa~~~~~~~A~~ 105 (309)
..|.+.|++.|++|...+. ++...+...+.+...+ +|.-|+--|+|.| .+..+.+-
T Consensus 26 ~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~------~DlVittGG~g~~----------------~~D~T~ea 83 (172)
T 3kbq_A 26 AFIGNFLTYHGYQVRRGFVVMDDLDEIGWAFRVALEV------SDLVVSSGGLGPT----------------FDDMTVEG 83 (172)
T ss_dssp HHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHH------CSEEEEESCCSSS----------------TTCCHHHH
T ss_pred HHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhc------CCEEEEcCCCcCC----------------cccchHHH
Confidence 4567788999999999885 4556666666665543 5655555555554 23333333
Q ss_pred HHhhcCcceeeecccccCHHHHHHHHHHHhc
Q 021698 106 TRSINNCNVLAVSGMSTSKESAVEILDTWLK 136 (309)
Q Consensus 106 ~r~hNnaNvl~~g~~~~~~~~a~~i~~~~l~ 136 (309)
.++ ++|..+..-+.+.+.++.|+.
T Consensus 84 ~a~-------~~~~~l~~~~e~~~~i~~~~~ 107 (172)
T 3kbq_A 84 FAK-------CIGQDLRIDEDALAMIKKKYG 107 (172)
T ss_dssp HHH-------HHTCCCEECHHHHHHHHHHHC
T ss_pred HHH-------HcCCCeeeCHHHHHHHHHHHc
Confidence 332 245566777778888888875
No 271
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=48.80 E-value=34 Score=29.83 Aligned_cols=70 Identities=16% Similarity=0.081 Sum_probs=43.4
Q ss_pred EEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCC-eEEEecCCcEEEECC---CC--cEEEEEcCCeEEEEEEcCCc
Q 021698 218 VRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKG-ERFDLTVGDYLFTPA---GD--VHRVKYYEETEFFIKWDGRW 289 (309)
Q Consensus 218 v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~-~~~~L~pGd~i~iP~---g~--~H~~~n~~d~~~~i~~~g~~ 289 (309)
..+++|..+-..-.....+.+|++|.+++ ..++ ....+.+||++=-.+ +. .+.+.+.+++.++.+....+
T Consensus 65 ~~~~~g~~i~~~G~~~~~~yiI~~G~v~v--~~~g~~~~~~~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~i~~~~~ 140 (299)
T 3shr_A 65 VEYGKDSCIIKEGDVGSLVYVMEDGKVEV--TKEGVKLCTMGPGKVFGELAILYNCTRTATVKTLVNVKLWAIDRQCF 140 (299)
T ss_dssp EEECTTCEEECTTCBCCCEEEEEESCEEE--EETTEEEEEECTTCEESCSGGGTTTBCCSEEEESSCEEEEEECHHHH
T ss_pred EEECCCCEEEcCCCcCceEEEEEEEEEEE--EECCEEEEEeCCCCeeeHhHHhcCCCCCcEEEEcCCeEEEEEcHHHH
Confidence 34555555433333455678899999999 4454 447899999764211 23 34678888888765544333
No 272
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=48.29 E-value=1.2e+02 Score=25.33 Aligned_cols=36 Identities=28% Similarity=0.264 Sum_probs=26.9
Q ss_pred CcEEEEEe---CcccHHHHHHHHHHHHhCCCcEEEecCCC
Q 021698 12 PLKIIAGA---DSFGAELKDALVSHLRSLNIDVEDLGTSD 48 (309)
Q Consensus 12 ~mkI~ig~---D~~g~~lk~~l~~~l~~~g~~v~d~g~~~ 48 (309)
+-||++++ |.--+. |+.+...|+..||+|+|+|.+.
T Consensus 88 ~~~vll~~~~gd~H~iG-~~~va~~l~~~G~~v~~LG~~v 126 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIG-KNLVAMMLESGGFTVYNLGVDI 126 (210)
T ss_dssp CCEEEEEEBTTCCCCHH-HHHHHHHHHHTTCEEEECCSSB
T ss_pred CCEEEEEeCCCcccHHH-HHHHHHHHHHCCCEEEECCCCC
Confidence 34888886 332333 4778888999999999999853
No 273
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=47.75 E-value=67 Score=25.66 Aligned_cols=74 Identities=9% Similarity=-0.007 Sum_probs=44.9
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CCeE---EEecCCcEEE-EC---CC--CcEEEEEcCCeEEEEEEc
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KGER---FDLTVGDYLF-TP---AG--DVHRVKYYEETEFFIKWD 286 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~~~---~~L~pGd~i~-iP---~g--~~H~~~n~~d~~~~i~~~ 286 (309)
...+++|...-..-.+...+.+|++|.+++.... +|+. ..+.|||++- +. .+ ..+.+.+.+++.++.+..
T Consensus 32 ~~~~~~g~~l~~~G~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~ge~~~~~~~~~~~~~~~a~~~~~v~~i~~ 111 (194)
T 3dn7_A 32 LKKVRKKETLLKTGEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLSDYMAFQKQQPADFYIQSVENCELLSITY 111 (194)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEECCHHHHHHTCBCSSEEEESSCEEEEEEEH
T ss_pred EEEEcCCCEEECCCCeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEeehHHHhcCCCCceEEEEECCEEEEEEeH
Confidence 3456666655322234456788999999984222 3433 4578999885 31 22 345678888888776554
Q ss_pred CCcc
Q 021698 287 GRWD 290 (309)
Q Consensus 287 g~~~ 290 (309)
..+.
T Consensus 112 ~~~~ 115 (194)
T 3dn7_A 112 TEQE 115 (194)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4333
No 274
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=47.53 E-value=46 Score=30.84 Aligned_cols=125 Identities=18% Similarity=0.169 Sum_probs=68.1
Q ss_pred CCCcccCCCCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCCCCcch-----hHHHH----------------HH
Q 021698 1 MAENADAAAPHPLKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTSDYYSI-----GAEVG----------------RR 59 (309)
Q Consensus 1 ~~~~~~~~~~~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~g~~~y~~~-----a~~va----------------~~ 59 (309)
|-+++.+..+| -++||+=.+|...-..| ...+++|+=++.+++..| ...+. +.
T Consensus 1 ~~~~~~~~~~~--~vIvGgG~AGl~aA~~L----~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~ 74 (385)
T 3klj_A 1 MHHHHHHKSTK--ILILGAGPAGFSAAKAA----LGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEK 74 (385)
T ss_dssp -------CBCS--EEEECCSHHHHHHHHHH----TTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHH
T ss_pred CCCccccCCCC--EEEEcCcHHHHHHHHHH----hCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHH
Confidence 45555555444 79999999999887666 677899988877643211 11111 00
Q ss_pred ----hhcC--C------------CCCC-cceEEEEecCchhhhhhhcCCCceE-EEEeCCHHHHHHHHhh--cCcceeee
Q 021698 60 ----VSSS--D------------SSET-TTRGLVACGTGVGVAIFANKNPGVF-ATTCLTPADALNTRSI--NNCNVLAV 117 (309)
Q Consensus 60 ----v~~~--~------------~~~~-~~~gi~~cgtG~G~~i~aNK~~gir-aa~~~~~~~A~~~r~h--NnaNvl~~ 117 (309)
+.-. . .+|+ ..+--|+-.||.-- .--.+||.. .-.+.+..++...+.. +.-+|+.+
T Consensus 75 ~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p--~~p~i~G~~~v~~~~~~~d~~~l~~~l~~~~~vvVI 152 (385)
T 3klj_A 75 NNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIA--NKIKVPHADEIFSLYSYDDALKIKDECKNKGKAFII 152 (385)
T ss_dssp TTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEE--CCCCCTTCSCEECCSSHHHHHHHHHHHHHHSCEEEE
T ss_pred CCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCc--CCCCCCCCCCeEEeCCHHHHHHHHHHhhcCCeEEEE
Confidence 0000 0 0111 11223444455311 111356664 2234567777655543 46799999
Q ss_pred cccccCHHHHHHHHHH
Q 021698 118 SGMSTSKESAVEILDT 133 (309)
Q Consensus 118 g~~~~~~~~a~~i~~~ 133 (309)
|+..+|.|.|..+.+.
T Consensus 153 GgG~~g~E~A~~l~~~ 168 (385)
T 3klj_A 153 GGGILGIELAQAIIDS 168 (385)
T ss_dssp CCSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhC
Confidence 9999999999988775
No 275
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=45.53 E-value=69 Score=24.63 Aligned_cols=31 Identities=16% Similarity=0.171 Sum_probs=25.2
Q ss_pred CCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEE
Q 021698 10 PHPLKIIAGADSFGAELKDALVSHLRSLNIDVE 42 (309)
Q Consensus 10 ~~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~ 42 (309)
.+++||.|..|+. ...+.|++.|++.||+|+
T Consensus 34 ~~~~~Ilivdd~~--~~~~~l~~~L~~~g~~v~ 64 (157)
T 3hzh_A 34 GIPFNVLIVDDSV--FTVKQLTQIFTSEGFNII 64 (157)
T ss_dssp TEECEEEEECSCH--HHHHHHHHHHHHTTCEEE
T ss_pred CCceEEEEEeCCH--HHHHHHHHHHHhCCCeEE
Confidence 3457999999985 456788899999999997
No 276
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=45.48 E-value=84 Score=23.87 Aligned_cols=37 Identities=14% Similarity=0.009 Sum_probs=28.0
Q ss_pred cCCCCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEe
Q 021698 6 DAAAPHPLKIIAGADSFGAELKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 6 ~~~~~~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~ 44 (309)
+....+++||.|..|+. ...+.|.+.|++.||+|.-+
T Consensus 8 ~~~~~~~~~ILivdd~~--~~~~~l~~~L~~~g~~v~~~ 44 (153)
T 3hv2_A 8 VATVTRRPEILLVDSQE--VILQRLQQLLSPLPYTLHFA 44 (153)
T ss_dssp CCCCCSCCEEEEECSCH--HHHHHHHHHHTTSSCEEEEE
T ss_pred hhhccCCceEEEECCCH--HHHHHHHHHhcccCcEEEEE
Confidence 33444567999999985 44678899999999998753
No 277
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=45.39 E-value=19 Score=27.43 Aligned_cols=41 Identities=12% Similarity=0.071 Sum_probs=28.3
Q ss_pred CCcEEEEEeCcccH--HHHHHHHHHHHhCCCcEEEecCCCCcch
Q 021698 11 HPLKIIAGADSFGA--ELKDALVSHLRSLNIDVEDLGTSDYYSI 52 (309)
Q Consensus 11 ~~mkI~ig~D~~g~--~lk~~l~~~l~~~g~~v~d~g~~~y~~~ 52 (309)
+.|||.+.|+..-- -|.++|++.+++.|+++. +...++.++
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~-i~~~~~~~~ 45 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNINAT-IEAIAETRL 45 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEE-EEEECSTTH
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCCeE-EEEecHHHH
Confidence 45899999986311 677899999999998743 333344444
No 278
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus}
Probab=45.26 E-value=31 Score=33.22 Aligned_cols=45 Identities=20% Similarity=0.247 Sum_probs=37.2
Q ss_pred cEEEEEeCc--ccHHHHHHHHHHHHhCCCcE-EEecCCCCcchhHHHH
Q 021698 13 LKIIAGADS--FGAELKDALVSHLRSLNIDV-EDLGTSDYYSIGAEVG 57 (309)
Q Consensus 13 mkI~ig~D~--~g~~lk~~l~~~l~~~g~~v-~d~g~~~y~~~a~~va 57 (309)
.+|+||.|. .+-.+++++.+-|.+.|.+| +|.|.-.-|-++..+-
T Consensus 49 ~~VvVG~D~R~ss~~~~~a~a~gl~~~G~~V~~~~g~~pTP~~~~av~ 96 (464)
T 1tuo_A 49 GLVVVGHDTRFLADAFARALSGHLAGMGLKVVLLKGPVPTPLLSFAVR 96 (464)
T ss_dssp CEEEEEECSSTTHHHHHHHHHHHHHHHTCEEEEESSSCCHHHHHHHHH
T ss_pred CeEEEeeCCCCCHHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHH
Confidence 379999996 57799999999999999999 5889766666655553
No 279
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=45.01 E-value=8.1 Score=30.00 Aligned_cols=22 Identities=27% Similarity=0.225 Sum_probs=19.5
Q ss_pred cceEEEEecCchhhhhhhcCCC
Q 021698 69 TTRGLVACGTGVGVAIFANKNP 90 (309)
Q Consensus 69 ~~~gi~~cgtG~G~~i~aNK~~ 90 (309)
.-+-+|+|+.|...||.+||.+
T Consensus 6 ~mkIlL~C~aGmSTsllv~km~ 27 (108)
T 3nbm_A 6 ELKVLVLCAGSGTSAQLANAIN 27 (108)
T ss_dssp CEEEEEEESSSSHHHHHHHHHH
T ss_pred CceEEEECCCCCCHHHHHHHHH
Confidence 4578999999999999999985
No 280
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A
Probab=44.39 E-value=50 Score=32.66 Aligned_cols=46 Identities=11% Similarity=0.137 Sum_probs=38.4
Q ss_pred EEEEEeCc--ccHHHHHHHHHHHHhCCCcEEEe---cCCCCcchhHHHHHH
Q 021698 14 KIIAGADS--FGAELKDALVSHLRSLNIDVEDL---GTSDYYSIGAEVGRR 59 (309)
Q Consensus 14 kI~ig~D~--~g~~lk~~l~~~l~~~g~~v~d~---g~~~y~~~a~~va~~ 59 (309)
+|+||-|. .+-.+++.+.+-|...|++|.|+ |.-.-|-++..+-..
T Consensus 60 ~VvIG~D~R~sS~~~a~~~a~~l~a~Gi~V~~~~~~G~~pTP~l~fav~~~ 110 (572)
T 1kfi_A 60 VLFVGGDGRYFNRQAIFSIIRLAYANDISEVHVGQAGLMSTPASSHYIRKV 110 (572)
T ss_dssp EEEEEECCCTTHHHHHHHHHHHHHHTTCSEEEEEGGGCBCHHHHHHHHHHH
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHHCCCEEEEecCCCCCChHHHHHHHHHh
Confidence 79999996 67799999999999999999999 776666666666544
No 281
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=44.34 E-value=79 Score=25.89 Aligned_cols=75 Identities=11% Similarity=-0.016 Sum_probs=46.2
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CCe---EEEecCCcEEEEC----CC--CcEEEEEcCCeEEEEEE
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KGE---RFDLTVGDYLFTP----AG--DVHRVKYYEETEFFIKW 285 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~~---~~~L~pGd~i~iP----~g--~~H~~~n~~d~~~~i~~ 285 (309)
...++++|...-..-.+...+.+|++|.+++.... +++ ...+.|||++-.. .+ ..+.+.+.+++.++.+.
T Consensus 35 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~~~~v~~i~ 114 (230)
T 3iwz_A 35 HRRRYPTRTDVFRPGDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVGEMGLFIESDTREVILRTRTQCELAEIS 114 (230)
T ss_dssp EEEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCGGGTSCCSBCCSEEEESSCEEEEEEE
T ss_pred eEEEeCCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEEehhhhcCCCCceeEEEEcCcEEEEEEe
Confidence 35667777765433334567788999999984222 333 3568899987432 22 33456777888876555
Q ss_pred cCCcc
Q 021698 286 DGRWD 290 (309)
Q Consensus 286 ~g~~~ 290 (309)
...+.
T Consensus 115 ~~~~~ 119 (230)
T 3iwz_A 115 YERLQ 119 (230)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 282
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=43.05 E-value=62 Score=28.61 Aligned_cols=71 Identities=15% Similarity=-0.005 Sum_probs=42.1
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCC---eEEEecCCcEEE----E-CCCCcEEEEEcCCeEEEEEEcC
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKG---ERFDLTVGDYLF----T-PAGDVHRVKYYEETEFFIKWDG 287 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~---~~~~L~pGd~i~----i-P~g~~H~~~n~~d~~~~i~~~g 287 (309)
...+++|..+-.--.+...+.+|++|.+++.....+ ....+.+||++= + ..-..+.+.+.+++.++.+...
T Consensus 38 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~fGe~~l~~~~~~~~~v~A~~~~~~~~i~~~ 116 (333)
T 4ava_A 38 PLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIVGEIALLRDSPRSATVTTIEPLTGWTGGRG 116 (333)
T ss_dssp EEEECTTCEEECTTSBCCCEEEEEECCEEEEEECTTCCEEEEEECTTCEESHHHHHHTCBCSSEEEESSCEEEEEECHH
T ss_pred EEEECCCCEEEeCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEeeHHHhcCCCCceEEEEEecCEEEEEEcHH
Confidence 345666655422222345577899999998422222 357789999762 1 1223456788888887654433
No 283
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=42.91 E-value=43 Score=30.90 Aligned_cols=84 Identities=17% Similarity=0.063 Sum_probs=48.4
Q ss_pred EcCCCcCCccccCccEEEEEEeCEEEEEEEe-CC----eEEEecCCcEEEEC---CCCc--EEEEEcCCeEEEEEEcCCc
Q 021698 220 FKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KG----ERFDLTVGDYLFTP---AGDV--HRVKYYEETEFFIKWDGRW 289 (309)
Q Consensus 220 l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~----~~~~L~pGd~i~iP---~g~~--H~~~n~~d~~~~i~~~g~~ 289 (309)
+++|..+-.--.+...+.+|++|++++.... ++ ....+.+||++=-- .+.+ ..+.+.+++.++.+-...|
T Consensus 276 ~~~ge~I~~eGd~~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~fGe~all~~~~r~~tv~A~~~~~ll~i~~~~f 355 (381)
T 4din_B 276 FEDGEKIVVQGEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYFGEIALLLNRPRAATVVARGPLKCVKLDRPRF 355 (381)
T ss_dssp BCSSCBSSCTTSBCCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEECTTGGGSCCBCSSEEEESSCBEEEEEEHHHH
T ss_pred CCCCCEEEeCCCcCCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEechHHHhCCCCceeEEEEcCCEEEEEEeHHHH
Confidence 4455544322234456778999999984111 11 25789999977211 1222 4577778888876666655
Q ss_pred ccccchhHHHHHHH
Q 021698 290 DMFFDEDLETAKKA 303 (309)
Q Consensus 290 ~i~~~~~~~~a~~~ 303 (309)
.-.+.+.-...++.
T Consensus 356 ~~ll~~~~~i~~~~ 369 (381)
T 4din_B 356 ERVLGPCSEILKRN 369 (381)
T ss_dssp HHHHCCHHHHHHTT
T ss_pred HHHHhhhHHHHHHH
Confidence 55555444444433
No 284
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=42.89 E-value=27 Score=26.95 Aligned_cols=36 Identities=19% Similarity=0.238 Sum_probs=27.1
Q ss_pred CCCCCcEEEEEeCcccH--HHHHHHHHHHHhCCCcEEE
Q 021698 8 AAPHPLKIIAGADSFGA--ELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 8 ~~~~~mkI~ig~D~~g~--~lk~~l~~~l~~~g~~v~d 43 (309)
...++|||.+.|--+.- -|.+++++..+++|+++.=
T Consensus 2 ~~~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i 39 (108)
T 3nbm_A 2 NASKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIA 39 (108)
T ss_dssp ---CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEE
T ss_pred CcccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEE
Confidence 34678999999986543 4788999999999988765
No 285
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=42.88 E-value=98 Score=22.76 Aligned_cols=37 Identities=19% Similarity=0.175 Sum_probs=25.4
Q ss_pred CCCCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEec
Q 021698 7 AAAPHPLKIIAGADSFGAELKDALVSHLRSLNIDVEDLG 45 (309)
Q Consensus 7 ~~~~~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~g 45 (309)
+...++|||.|..|+. ...+.|++.|++.|++|.-+.
T Consensus 2 s~~~~~~~ilivdd~~--~~~~~l~~~L~~~~~~v~~~~ 38 (137)
T 3hdg_A 2 SLREVALKILIVEDDT--DAREWLSTIISNHFPEVWSAG 38 (137)
T ss_dssp -----CCCEEEECSCH--HHHHHHHHHHHTTCSCEEEES
T ss_pred CccccccEEEEEeCCH--HHHHHHHHHHHhcCcEEEEEC
Confidence 3445678999999985 445778888988899887544
No 286
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=42.30 E-value=38 Score=33.61 Aligned_cols=26 Identities=35% Similarity=0.421 Sum_probs=23.0
Q ss_pred EEEecCCcEEEECCCCcEEEEEcCCe
Q 021698 254 RFDLTVGDYLFTPAGDVHRVKYYEET 279 (309)
Q Consensus 254 ~~~L~pGd~i~iP~g~~H~~~n~~d~ 279 (309)
.++=+|||+++++||..|++.|.|-+
T Consensus 339 r~vQkpGd~Vi~~PgayH~v~n~G~~ 364 (531)
T 3avr_A 339 RFIQRPGDLVWINAGTVHWVQAIGWC 364 (531)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSSE
T ss_pred EEEECCCCEEEECCCceEEEEeccee
Confidence 46678999999999999999999953
No 287
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=41.68 E-value=60 Score=31.93 Aligned_cols=26 Identities=35% Similarity=0.417 Sum_probs=23.1
Q ss_pred EEEecCCcEEEECCCCcEEEEEcCCe
Q 021698 254 RFDLTVGDYLFTPAGDVHRVKYYEET 279 (309)
Q Consensus 254 ~~~L~pGd~i~iP~g~~H~~~n~~d~ 279 (309)
.++=+|||+++++||..|++.+.|=+
T Consensus 314 r~iQkPGdfVit~PgtyH~Vqs~Gf~ 339 (510)
T 4ask_A 314 RFVQRPGDLVWINAGTVHWVQATGWC 339 (510)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSSE
T ss_pred EEEECCCCEEEECCCceEEEEecCee
Confidence 46778999999999999999999854
No 288
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=41.56 E-value=1e+02 Score=22.62 Aligned_cols=35 Identities=23% Similarity=0.143 Sum_probs=25.1
Q ss_pred CCCCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021698 7 AAAPHPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 7 ~~~~~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d 43 (309)
....+++||.|..|+. ...+.|+..|++.||+|+.
T Consensus 4 ~~~~~~~~iLivdd~~--~~~~~l~~~L~~~g~~v~~ 38 (140)
T 3cg0_A 4 TASDDLPGVLIVEDGR--LAAATLRIQLESLGYDVLG 38 (140)
T ss_dssp ----CCCEEEEECCBH--HHHHHHHHHHHHHTCEEEE
T ss_pred ccCCCCceEEEEECCH--HHHHHHHHHHHHCCCeeEE
Confidence 3445678999999884 4557788888888999874
No 289
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=41.28 E-value=37 Score=25.61 Aligned_cols=27 Identities=19% Similarity=0.210 Sum_probs=22.5
Q ss_pred EEEecCCcEEEECCCCcEEEEEcCCeE
Q 021698 254 RFDLTVGDYLFTPAGDVHRVKYYEETE 280 (309)
Q Consensus 254 ~~~L~pGd~i~iP~g~~H~~~n~~d~~ 280 (309)
.-.|++||.++||.|-+=...+.++-+
T Consensus 7 ~~~l~~G~v~vVPq~~~v~~~A~~~le 33 (93)
T 1dgw_Y 7 AATLSEGDIIVIPSSFPVALKAASDLN 33 (93)
T ss_dssp EEEECTTCEEEECTTCCEEEEESSSEE
T ss_pred hceecCCcEEEECCCCceeEEecCCeE
Confidence 356999999999999998888877533
No 290
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=40.90 E-value=1.2e+02 Score=23.13 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=25.4
Q ss_pred CCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEe
Q 021698 9 APHPLKIIAGADSFGAELKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 9 ~~~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~ 44 (309)
..+++||.|..|+. ...+.|++.|++.||+|.-+
T Consensus 4 ~~~~~~ILivdd~~--~~~~~l~~~L~~~g~~v~~~ 37 (154)
T 3gt7_A 4 SNRAGEILIVEDSP--TQAEHLKHILEETGYQTEHV 37 (154)
T ss_dssp ---CCEEEEECSCH--HHHHHHHHHHHTTTCEEEEE
T ss_pred ccCCCcEEEEeCCH--HHHHHHHHHHHHCCCEEEEe
Confidence 34567999999975 45678999999999998654
No 291
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=40.78 E-value=1.4e+02 Score=27.45 Aligned_cols=100 Identities=16% Similarity=0.048 Sum_probs=59.1
Q ss_pred CCCCCCcEEEEEeCc----ccH--HHHHHHHHHHHhCC--CcEEEecCCCC-cchhHHHHHHhhcCCCCCCcceEEEEec
Q 021698 7 AAAPHPLKIIAGADS----FGA--ELKDALVSHLRSLN--IDVEDLGTSDY-YSIGAEVGRRVSSSDSSETTTRGLVACG 77 (309)
Q Consensus 7 ~~~~~~mkI~ig~D~----~g~--~lk~~l~~~l~~~g--~~v~d~g~~~y-~~~a~~va~~v~~~~~~~~~~~gi~~cg 77 (309)
+...++.||++-..- .+| .+-+-+.+..++.| ++++-+-..+. .++ .+.-+.+.+ ..++ +|++.|
T Consensus 21 ~~~~~~~kIglv~~g~i~D~~f~~~~~~G~~~~~~~~G~~~~~~~~e~~~~~~d~-~~~l~~l~~----~g~d-~Ii~~g 94 (356)
T 3s99_A 21 SMAEEKLKVGFIYIGPPGDFGWTYQHDQARKELVEALGDKVETTFLENVAEGADA-ERSIKRIAR----AGNK-LIFTTS 94 (356)
T ss_dssp -----CEEEEEECSSCGGGSSHHHHHHHHHHHHHHHHTTTEEEEEECSCCTTHHH-HHHHHHHHH----TTCS-EEEECS
T ss_pred cccCCCCEEEEEEccCCCchhHHHHHHHHHHHHHHHhCCceEEEEEecCCCHHHH-HHHHHHHHH----CCCC-EEEECC
Confidence 344566788877531 234 56788888888888 88775544322 344 334444444 3455 777777
Q ss_pred Cchhhhh--hhcCCCceEEEEeCCHHHHHHHHhhcCcceeeeccc
Q 021698 78 TGVGVAI--FANKNPGVFATTCLTPADALNTRSINNCNVLAVSGM 120 (309)
Q Consensus 78 tG~G~~i--~aNK~~giraa~~~~~~~A~~~r~hNnaNvl~~g~~ 120 (309)
.+..-.+ +|.++|.|.-.+|... .+..||.++-.+
T Consensus 95 ~~~~~~~~~vA~~~Pdv~fv~id~~--------~~~~Nv~sv~~~ 131 (356)
T 3s99_A 95 FGYMDPTVKVAKKFPDVKFEHATGY--------KTADNMSAYNAR 131 (356)
T ss_dssp GGGHHHHHHHHTTCTTSEEEEESCC--------CCBTTEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEecc--------ccCCcEEEEEec
Confidence 6665444 4788999998888643 134577666555
No 292
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=40.50 E-value=29 Score=31.37 Aligned_cols=35 Identities=20% Similarity=0.097 Sum_probs=27.6
Q ss_pred CCcEEEEEeCc------ccHHH-HHHHHHHHHhCCCcEEEec
Q 021698 11 HPLKIIAGADS------FGAEL-KDALVSHLRSLNIDVEDLG 45 (309)
Q Consensus 11 ~~mkI~ig~D~------~g~~l-k~~l~~~l~~~g~~v~d~g 45 (309)
++|||.+-++. .|.+. -..|.+.|.++||+|.=+.
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~ 42 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFT 42 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEe
Confidence 57999998854 55543 5678899999999999665
No 293
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=40.47 E-value=1.2e+02 Score=25.27 Aligned_cols=74 Identities=11% Similarity=0.045 Sum_probs=44.7
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CCeE---EEecCCcEEEEC---CCC----cEEEEEcCCeEEEEEE
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KGER---FDLTVGDYLFTP---AGD----VHRVKYYEETEFFIKW 285 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~~~---~~L~pGd~i~iP---~g~----~H~~~n~~d~~~~i~~ 285 (309)
..++++|..+-..--+...+.+|++|.+++.... +|+. ..+.|||++-.. .+. ...+.+.+++.++.+.
T Consensus 45 ~~~~~~ge~i~~~G~~~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G~~~~~~~~~~~~~~~~~A~~~~~v~~i~ 124 (243)
T 3la7_A 45 VETFERNKTIFFPGDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFGVLSLLTGNKSDRFYHAVAFTPVELLSAP 124 (243)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEESCHHHHSSCCSBCCEEEEESSSEEEEEEE
T ss_pred eEEECCCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEcchHHhCCCCCcceEEEEEccceEEEEEc
Confidence 5567777765433334457788999999984222 2332 568899976321 122 2567777888876554
Q ss_pred cCCcc
Q 021698 286 DGRWD 290 (309)
Q Consensus 286 ~g~~~ 290 (309)
...+.
T Consensus 125 ~~~~~ 129 (243)
T 3la7_A 125 IEQVE 129 (243)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44333
No 294
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=39.78 E-value=83 Score=25.84 Aligned_cols=63 Identities=11% Similarity=-0.030 Sum_probs=39.5
Q ss_pred CcEEEEEeCcccH--HHHHHHHHHHHh-CCCcEEEecCCCCcchhHHHHHHhhcCCCCCCcceEEEEecC
Q 021698 12 PLKIIAGADSFGA--ELKDALVSHLRS-LNIDVEDLGTSDYYSIGAEVGRRVSSSDSSETTTRGLVACGT 78 (309)
Q Consensus 12 ~mkI~ig~D~~g~--~lk~~l~~~l~~-~g~~v~d~g~~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgt 78 (309)
+.+|+|.| |..+ .|++.+...+-+ ..+..+|+-.++-.++..++.+.+.+- ...+-.|++|--
T Consensus 21 ~~~iII~s-HG~~A~gl~~s~~~i~G~~~~v~av~~~~~~~~~~~~~~~~~i~~~---~~~~gVLiLtDl 86 (159)
T 3mtq_A 21 KRHYIFAS-HGSFANGLLNSVELILGKQPDIHTLCAYVEEEVDLTQQVEALVARF---PAQDELIVITDI 86 (159)
T ss_dssp CEEEEEEE-ETTHHHHHHHHHHHHHCCCTTEEEEEETSCSSSCHHHHHHHHHHTS---CTTSEEEEEESC
T ss_pred CceEEEEe-CcHHHHHHHHHHHHHcCCCCCeEEEECCCCCHHHHHHHHHHHHHhc---CCCCCEEEEEeC
Confidence 34566665 5544 778877777755 467888886654457888888888762 223334445544
No 295
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=39.55 E-value=68 Score=25.89 Aligned_cols=74 Identities=9% Similarity=-0.086 Sum_probs=43.8
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CCe---EEEecCCcEEEE-----CCCCcEEEEEcCCeEEEEEEcC
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KGE---RFDLTVGDYLFT-----PAGDVHRVKYYEETEFFIKWDG 287 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~~---~~~L~pGd~i~i-----P~g~~H~~~n~~d~~~~i~~~g 287 (309)
..++++|..+-..--+...+.+|++|.+++.... +++ ...+.||+++=. .......+.+.+++.++.+...
T Consensus 64 ~~~~~~ge~i~~~G~~~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~fGe~~~l~~~~~~~~v~A~~~~~v~~i~~~ 143 (187)
T 3gyd_A 64 CYAAPRDCQLLTEGDPGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAIIGEMSMIDGMPRSASCVASLPTDFAVLSRD 143 (187)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEESHHHHHHCCCCSSEEEEEEEEEEEEEEHH
T ss_pred EEEeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCeeeeHHHhCCCCeeEEEEECCCeEEEEEcHH
Confidence 4566676665333334557788999999984222 232 357889997632 2223345677777777655444
Q ss_pred Ccc
Q 021698 288 RWD 290 (309)
Q Consensus 288 ~~~ 290 (309)
.+.
T Consensus 144 ~~~ 146 (187)
T 3gyd_A 144 ALY 146 (187)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 296
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=39.54 E-value=52 Score=25.20 Aligned_cols=35 Identities=20% Similarity=0.077 Sum_probs=26.6
Q ss_pred CCCCCCcEEEEEeCccc---HHHHHHHHHHHHhCCCcE
Q 021698 7 AAAPHPLKIIAGADSFG---AELKDALVSHLRSLNIDV 41 (309)
Q Consensus 7 ~~~~~~mkI~ig~D~~g---~~lk~~l~~~l~~~g~~v 41 (309)
....+++||++.|...- .=|++.|++.+++.|+++
T Consensus 16 ~~~~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~ 53 (113)
T 1tvm_A 16 YFQGSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPV 53 (113)
T ss_dssp CCSCSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCE
T ss_pred hhcccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 33445678999999742 236999999999999874
No 297
>3ihk_A Thiamin pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, SMR83; HET: TPP; 3.00A {Streptococcus mutans}
Probab=39.04 E-value=67 Score=27.71 Aligned_cols=62 Identities=8% Similarity=-0.022 Sum_probs=45.7
Q ss_pred EEEEEeCcccHHH-----------------HHHHHHHHHhCCCcEEEecCC-CCcchhHHHHHHhhcCCCCCCcceEEEE
Q 021698 14 KIIAGADSFGAEL-----------------KDALVSHLRSLNIDVEDLGTS-DYYSIGAEVGRRVSSSDSSETTTRGLVA 75 (309)
Q Consensus 14 kI~ig~D~~g~~l-----------------k~~l~~~l~~~g~~v~d~g~~-~y~~~a~~va~~v~~~~~~~~~~~gi~~ 75 (309)
.+.||+|.+.-.| .++.+++++++|.+++-+-++ |+.|.-+++-..... ..++.-+++
T Consensus 20 ~~~i~~DgGa~~l~~~g~~Pd~ivGDfDSi~~~~~~~~~~~~~~i~~~~~eKD~TD~e~Al~~a~~~----~~~~~I~i~ 95 (218)
T 3ihk_A 20 DYFVGIDKGSSFLLKNQLPLDLAIGDFDSVSAEEFKQIKAKAKKLVMAPAEKNDTDTELALKTIFDC----FGRVEIIVF 95 (218)
T ss_dssp SEEEEETHHHHHHHHTTCCCSEEEECCTTSCHHHHHHHHTTCSSEEECCSSCSSCHHHHHHHHHHHH----TSSCEEEEE
T ss_pred CEEEEEcHHHHHHHHcCCCCCEEEeCcccCCHHHHHHHHhcCCeEEECCCCCCCCHHHHHHHHHHHh----CCCCEEEEE
Confidence 5788999876655 456788899999999987664 788876666665554 345677778
Q ss_pred ecCc
Q 021698 76 CGTG 79 (309)
Q Consensus 76 cgtG 79 (309)
+++|
T Consensus 96 Ga~G 99 (218)
T 3ihk_A 96 GAFG 99 (218)
T ss_dssp SCSS
T ss_pred CCCC
Confidence 8887
No 298
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus}
Probab=38.77 E-value=49 Score=32.24 Aligned_cols=45 Identities=9% Similarity=0.029 Sum_probs=36.5
Q ss_pred EEEEEeCcc--cHHHHHHHHHHHHhCCCcEEEe---cCCCCcchhHHHHH
Q 021698 14 KIIAGADSF--GAELKDALVSHLRSLNIDVEDL---GTSDYYSIGAEVGR 58 (309)
Q Consensus 14 kI~ig~D~~--g~~lk~~l~~~l~~~g~~v~d~---g~~~y~~~a~~va~ 58 (309)
+|+||.|.- +-.+++.+.+-|.+.|.+|.++ |.-.-|-++..+-.
T Consensus 64 ~VvIG~D~R~~S~~~~~~~~~gl~a~Gi~V~~~~~~G~~pTP~l~~av~~ 113 (524)
T 2z0f_A 64 PLFLAKDTHALSEPAWATALSVFAAHGIEVRVEADGDYTPTPLVSLAILE 113 (524)
T ss_dssp CEEEEECSCTTHHHHHHHHHHHHHHTTCCEEEESSSSCCCHHHHHHHHHH
T ss_pred eEEEEeCCCcchHHHHHHHHHHHHHCCCEEEEeCCCCccCcHHHHHHHHH
Confidence 699999987 6789999999999999999986 66556666555544
No 299
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=38.72 E-value=92 Score=27.01 Aligned_cols=66 Identities=8% Similarity=0.105 Sum_probs=43.3
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCCC----------CcchhHHHHHH-h-hcCCCCCCcceEEEEecCch
Q 021698 13 LKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTSD----------YYSIGAEVGRR-V-SSSDSSETTTRGLVACGTGV 80 (309)
Q Consensus 13 mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~g~~~----------y~~~a~~va~~-v-~~~~~~~~~~~gi~~cgtG~ 80 (309)
.||.|.+- ..-++-+.++++|++.|++|++..... -++.-..+++. + .. ..+| +|++..|.+
T Consensus 118 ~rvglltp-y~~~~~~~~~~~l~~~Giev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~ad-aivL~CT~l 191 (240)
T 3ixl_A 118 RRVALATA-YIDDVNERLAAFLAEESLVPTGCRSLGITGVEAMARVDTATLVDLCVRAFEAA----PDSD-GILLSSGGL 191 (240)
T ss_dssp SEEEEEES-SCHHHHHHHHHHHHHTTCEEEEEEECCCCCHHHHHTCCHHHHHHHHHHHHHTS----TTCS-EEEEECTTS
T ss_pred CEEEEEeC-ChHHHHHHHHHHHHHCCCEEeccccCCCCCcchhhcCCHHHHHHHHHHHhhcC----CCCC-EEEEeCCCC
Confidence 48999885 567778899999999999999865432 12233445555 5 33 3344 555555877
Q ss_pred hhhh
Q 021698 81 GVAI 84 (309)
Q Consensus 81 G~~i 84 (309)
...-
T Consensus 192 ~~l~ 195 (240)
T 3ixl_A 192 LTLD 195 (240)
T ss_dssp CCTT
T ss_pred chhh
Confidence 6553
No 300
>2fts_A Gephyrin; gephyrin, neuroreceptor anchoring, structu protein; 2.41A {Rattus norvegicus} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 2fu3_A 1t3e_A
Probab=38.23 E-value=26 Score=33.48 Aligned_cols=47 Identities=13% Similarity=0.226 Sum_probs=34.1
Q ss_pred HHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCcceEEEEecCchh
Q 021698 29 ALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVG 81 (309)
Q Consensus 29 ~l~~~l~~~g~~v~d~g~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G 81 (309)
.|.+.|++.|+++.++|. ++...+...+.+.+.+ +|.-|+--|+|.|
T Consensus 212 ~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~------~DlVittGG~s~g 260 (419)
T 2fts_A 212 TLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISR------ADVIITSGGVSMG 260 (419)
T ss_dssp HHHHHHHTTTCCEEEEEEECSSHHHHHHHHHHHHHH------CSEEEEESCCSSS
T ss_pred HHHHHHHHCCCEEEEEeecCCCHHHHHHHHHHHHhc------CCEEEEcCCCcCC
Confidence 467778899999999986 4566666666666543 5777777777766
No 301
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=36.29 E-value=20 Score=35.08 Aligned_cols=110 Identities=20% Similarity=0.175 Sum_probs=65.5
Q ss_pred eCcccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCcceEEEEecCchhhhhhhc-----CCCc--
Q 021698 19 ADSFGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVGVAIFAN-----KNPG-- 91 (309)
Q Consensus 19 ~D~~g~~lk~~l~~~l~~~g~~v~d~g~~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G~~i~aN-----K~~g-- 91 (309)
.|--|.++++.|.+.|+++|..| ++-.-.-...|-.++....+ .. ..-=+|+|||.+.++.-| |++|
T Consensus 180 ~~~~G~dv~~~L~~al~r~gl~v-~v~aivNDtv~tll~~~y~~----~~-~~iglIlGTG~N~~y~e~~~~i~k~~~~~ 253 (485)
T 3o8m_A 180 EGVEGHDVVPMLQEQIEKLNIPI-NVVALINDTTGTLVASLYTD----PQ-TKMGIIIGTGVNGAYYDVVSGIEKLEGLL 253 (485)
T ss_dssp BTCTTSBHHHHHHHHHHHTTCCE-EEEEEECHHHHHHHHHHHHC----TT-EEEEEEESSSEEEEEEEEGGGCGGGTTTC
T ss_pred CCcCCccHHHHHHHHHHhcCCCc-eEEEEEEcHHHHHHHHhhCC----CC-cEEEEEEecCcceEEEeeccccccccccc
Confidence 45668899999999999999874 22111233456666666654 33 444468999999988764 3331
Q ss_pred --------eEEEE-------------eCCHHHHHHHHhhcCccee----eecccccCHHHHHHHHHHH
Q 021698 92 --------VFATT-------------CLTPADALNTRSINNCNVL----AVSGMSTSKESAVEILDTW 134 (309)
Q Consensus 92 --------iraa~-------------~~~~~~A~~~r~hNnaNvl----~~g~~~~~~~~a~~i~~~~ 134 (309)
--+.. -.+.+|-.+-+.++|-.-= .++++++|+-.-.-+++..
T Consensus 254 ~~~~~~~~~miINtEwG~F~~~~~~lp~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRlil~~l~ 321 (485)
T 3o8m_A 254 PEDIGPDSPMAINCEYGSFDNEHLVLPRTKYDVIIDEESPRPGQQAFEKMTSGYYLGEIMRLVLLDLY 321 (485)
T ss_dssp CTTSCTTCEEEEECCGGGTTTTCSSSCCCHHHHHHHHHSSSTTSCHHHHHHSTTTHHHHHHHHHHHHH
T ss_pred cccCCCCCcEEEEcccccCCCCcccCCCCchhhHHhhcCCCCCceeeccccccchHHHHHHHHHHHHH
Confidence 11111 1245555555554444332 4577788875555555444
No 302
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=36.29 E-value=34 Score=26.65 Aligned_cols=33 Identities=15% Similarity=0.175 Sum_probs=26.7
Q ss_pred CCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021698 9 APHPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 9 ~~~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d 43 (309)
.+++|||.|-=|..- +.+.++..|++.||+|++
T Consensus 5 ~~r~~rILiVdD~~~--~~~~l~~~L~~~G~~v~~ 37 (123)
T 2lpm_A 5 TERRLRVLVVEDESM--IAMLIEDTLCELGHEVAA 37 (123)
T ss_dssp CCCCCCEEEESSSTT--TSHHHHHHHHHHCCCCCB
T ss_pred CCCCCEEEEEeCCHH--HHHHHHHHHHHCCCEEEE
Confidence 457889999998865 456788899999999864
No 303
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=35.92 E-value=72 Score=27.38 Aligned_cols=76 Identities=17% Similarity=0.128 Sum_probs=42.0
Q ss_pred EEEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CC----eEEEecCCcEEEEC---CCC--cEEEEEcCCeEEEEEEcC
Q 021698 218 VRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KG----ERFDLTVGDYLFTP---AGD--VHRVKYYEETEFFIKWDG 287 (309)
Q Consensus 218 v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~----~~~~L~pGd~i~iP---~g~--~H~~~n~~d~~~~i~~~g 287 (309)
..+++|..+-..-.+...+.+|++|++++.... ++ ....+.+||++=-. .+. ...+.+.+++.++.+...
T Consensus 183 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~~~~i~~~ 262 (291)
T 2qcs_B 183 VQFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFGEIALLMNRPKAATVVARGPLKCVKLDRP 262 (291)
T ss_dssp EEECTTCEEECTTSCCCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEECSGGGTCCCCCSSEEEEEEEEEEEEEEHH
T ss_pred EEECCCCEEEeCCccCCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEecHHHHcCCCCcceEEEECCcEEEEEEcHH
Confidence 345555544322233456778999999984212 22 24688999987322 122 345666666666655444
Q ss_pred Cccccc
Q 021698 288 RWDMFF 293 (309)
Q Consensus 288 ~~~i~~ 293 (309)
.|.-.+
T Consensus 263 ~f~~~l 268 (291)
T 2qcs_B 263 RFERVL 268 (291)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 444333
No 304
>1g8l_A Molybdopterin biosynthesis MOEA protein; molybdenum cofactor biosynthesis, metal binding protein; 1.95A {Escherichia coli} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1fc5_A 1g8r_A 2nqu_A 2nro_A 2nqq_A 2nqk_A 2nqr_A 2nqm_A 2nqs_A 2nrp_A 2nqv_A 2nrs_A 2nqn_A
Probab=35.60 E-value=25 Score=33.54 Aligned_cols=47 Identities=26% Similarity=0.254 Sum_probs=32.1
Q ss_pred HHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCcceEEEEecCchh
Q 021698 29 ALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVG 81 (309)
Q Consensus 29 ~l~~~l~~~g~~v~d~g~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G 81 (309)
.|.+.|++.|+++.++|. ++...+...+.+.+.. +|.-|+--|+|.|
T Consensus 208 ~L~~~l~~~G~~v~~~~iv~Dd~~~i~~al~~a~~~------~DlvittGG~s~g 256 (411)
T 1g8l_A 208 AVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQ------ADVVISSGGVSVG 256 (411)
T ss_dssp HHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHH------CSEEEECSSSCSS
T ss_pred HHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHhhc------CCEEEECCCCCCC
Confidence 466778889999999986 4566666666666543 5655555556655
No 305
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=35.23 E-value=1.5e+02 Score=27.60 Aligned_cols=71 Identities=7% Similarity=-0.113 Sum_probs=43.1
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCCe---EEEecCCcEEEE-----CCCCcEEEEEcCCeEEEEEEcC
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKGE---RFDLTVGDYLFT-----PAGDVHRVKYYEETEFFIKWDG 287 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~~---~~~L~pGd~i~i-----P~g~~H~~~n~~d~~~~i~~~g 287 (309)
...+++|..+-..-.....+.+|++|.+.+....+++ ...+.+|+++=- ..-..+.+.+.+++.++.+-..
T Consensus 170 ~~~~~~Ge~I~~qGd~~d~~YiI~sG~v~v~~~~~G~~~~v~~l~~G~~fGe~all~~~pr~atv~A~~d~~l~~i~r~ 248 (416)
T 3tnp_B 170 EKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFGELALMYNTPKAATITATSPGALWGLDRV 248 (416)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEECEEEEEEECSSCEEEEEEEESCCEECGGGGTSCCCCSSEEEESSSEEEEEEEHH
T ss_pred EEEeCCCCEEEeCCCCCceEEEEEeeEEEEEEecCCCEEEEEEecCCCEEeeHHHhcCCCcccEEEEccCeEEEEEeeh
Confidence 3456666655433344567888999999984222332 356889996631 2223456778888877655433
No 306
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A*
Probab=34.44 E-value=71 Score=31.56 Aligned_cols=46 Identities=13% Similarity=0.120 Sum_probs=35.8
Q ss_pred cEEEEEeCcc--cHHHHHHHHHHHHhCCCcEEEe---cCCCCcchhHHHHH
Q 021698 13 LKIIAGADSF--GAELKDALVSHLRSLNIDVEDL---GTSDYYSIGAEVGR 58 (309)
Q Consensus 13 mkI~ig~D~~--g~~lk~~l~~~l~~~g~~v~d~---g~~~y~~~a~~va~ 58 (309)
-+|+||.|.- +-.+++.+.+-|...|++|.++ |.-.-|-++..+-.
T Consensus 54 ~~VvVG~D~R~~s~~~~~~~a~~l~a~Gv~V~~~~~~g~~pTP~vs~av~~ 104 (561)
T 3pmg_A 54 ATLVVGGDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCIIRK 104 (561)
T ss_dssp CEEEEEECCCTTHHHHHHHHHHHHHHTTCCEEEEEEEEECCHHHHHHHHHH
T ss_pred CEEEEEeCCCccHHHHHHHHHHHHHHCCCEEEEecCCCccCHHHHHHHHHH
Confidence 3899999965 4478999999999999999999 55555555555543
No 307
>2car_A Inosine triphosphate pyrophosphatase; hydrolase, inosine triphosphate pyrophosphohydrolase, inosine triphosphatase deficiency, ITP, IMP; 1.09A {Homo sapiens} SCOP: c.51.4.1 PDB: 2j4e_A* 2i5d_A
Probab=34.32 E-value=24 Score=30.28 Aligned_cols=78 Identities=12% Similarity=0.018 Sum_probs=51.0
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHh-CCCcEEEecCC------CCcchhHHHHHHhhcCCCCCCcceEEEEecCchhhhhh
Q 021698 13 LKIIAGADSFGAELKDALVSHLRS-LNIDVEDLGTS------DYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVGVAIF 85 (309)
Q Consensus 13 mkI~ig~D~~g~~lk~~l~~~l~~-~g~~v~d~g~~------~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G~~i~ 85 (309)
+||++++--.| .+ +++++.|.. .|++|+....+ ++.+.|..=|+.+.+ ....-++.+-||+=+. +
T Consensus 10 ~~iv~aT~N~~-K~-~E~~~iL~~~~~i~v~~~~~~~~E~~~tf~enA~~KA~~a~~-----~~g~pvlaDDSGL~vd-A 81 (196)
T 2car_A 10 KKIVFVTGNAK-KL-EEVVQILGDKFPCTLVAQKIDLPEYQGEPDEISIQKCQEAVR-----QVQGPVLVEDTCLCFN-A 81 (196)
T ss_dssp CEEEEECSCHH-HH-HHHHHHHCTTCCSEEEEECCCCCCBCSCHHHHHHHHHHHHHH-----HHSSCEEEEEEEEEEG-G
T ss_pred ceEEEEcCCHH-HH-HHHHHHcCCCCCcEEEECCCCCCCCCCCHHHHHHHHHHHHHH-----HHCCCEEeeccEEEEe-c
Confidence 37988876644 33 567777877 58888865421 355566666666654 1234588899987665 4
Q ss_pred hcCCCceEEEEeCCHHHHHHH
Q 021698 86 ANKNPGVFATTCLTPADALNT 106 (309)
Q Consensus 86 aNK~~giraa~~~~~~~A~~~ 106 (309)
.|-.||| |+|+.+
T Consensus 82 L~G~PGv--------ySar~~ 94 (196)
T 2car_A 82 LGGLPGP--------YIKWFL 94 (196)
T ss_dssp GTTCEET--------THHHHH
T ss_pred cCCCCcc--------hhhHhh
Confidence 5999997 566666
No 308
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=33.87 E-value=51 Score=30.39 Aligned_cols=72 Identities=17% Similarity=0.086 Sum_probs=47.5
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCC-eEEEecCCcEEEEC---CCC--cEEEEEcCCeEEEEEEcCCcc
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKG-ERFDLTVGDYLFTP---AGD--VHRVKYYEETEFFIKWDGRWD 290 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~-~~~~L~pGd~i~iP---~g~--~H~~~n~~d~~~~i~~~g~~~ 290 (309)
...+++|..+-..-.+...+.+|++|.+.+ ..++ ....+.+|+++=-- .+. .+.+.+.+++.++.+....+.
T Consensus 155 ~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v--~~~~~~v~~l~~G~~fGe~all~~~~r~atv~A~~~~~l~~i~~~~f~ 232 (381)
T 4din_B 155 PVTHIAGETVIQQGNEGDNFYVVDQGEVDV--YVNGEWVTNISEGGSFGELALIYGTPRAATVKAKTDLKLWGIDRDSYR 232 (381)
T ss_dssp EEECCTTCBSSCTTSBCCEEEECSSSEEEE--EETTEEEEEEESSCCBCGGGGTSCCBCSSEEEESSSCEEEEEEHHHHH
T ss_pred EEEECCCCEEEeCCCCCCeEEEEEeeEEEE--EECCeEeeeCCCCCEEEchHHhcCCCcceEEEECCCEEEEEEchHHHH
Confidence 456777777654445566788899999999 4444 44678899875311 123 356788888888766554444
No 309
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=33.78 E-value=23 Score=29.65 Aligned_cols=49 Identities=12% Similarity=0.196 Sum_probs=35.9
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhc
Q 021698 13 LKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSS 62 (309)
Q Consensus 13 mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~g~~~y~~~a~~va~~v~~ 62 (309)
||++++.|....+---.+.+.|. .|.+++..|..-+...+..+.+.+.+
T Consensus 1 m~li~a~D~~~~~~~~~~~~~~~-~~~diie~G~p~~~~~g~~~i~~ir~ 49 (211)
T 3f4w_A 1 MKLQLALDELTLPEAMVFMDKVV-DDVDIIEVGTPFLIREGVNAIKAIKE 49 (211)
T ss_dssp CEEEEEECSCCHHHHHHHHHHHG-GGCSEEEECHHHHHHHTTHHHHHHHH
T ss_pred CcEEEEeCCCCHHHHHHHHHHhh-cCccEEEeCcHHHHhccHHHHHHHHH
Confidence 89999999988877667777775 58999998962113456666666654
No 310
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=33.67 E-value=32 Score=28.39 Aligned_cols=74 Identities=11% Similarity=0.073 Sum_probs=43.9
Q ss_pred EEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CCe---EEEecCCcEEEECC---C---CcEEEEEcCCeEEEEEEc
Q 021698 217 IVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KGE---RFDLTVGDYLFTPA---G---DVHRVKYYEETEFFIKWD 286 (309)
Q Consensus 217 ~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~~---~~~L~pGd~i~iP~---g---~~H~~~n~~d~~~~i~~~ 286 (309)
..++++|...-..-.+...+.+|++|.+.+.... +|+ ...+.|||++-..+ + ..+.+.+.+++.++.+..
T Consensus 34 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~~~~v~~i~~ 113 (227)
T 3dkw_A 34 LVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAVVPSQLFRFSN 113 (227)
T ss_dssp EEECCTTEEEECTTSBCCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEESCTTTTTTCSBCSSCEEESSCCEEEEEES
T ss_pred EEEECCCCEEEcCCCccceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHhcCCCCCCceEEEEcCcEEEEEEeH
Confidence 3455666554333334456788999999983111 222 25678999774321 2 345677778888776655
Q ss_pred CCcc
Q 021698 287 GRWD 290 (309)
Q Consensus 287 g~~~ 290 (309)
..+.
T Consensus 114 ~~~~ 117 (227)
T 3dkw_A 114 KAYL 117 (227)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 311
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=33.41 E-value=55 Score=27.81 Aligned_cols=121 Identities=17% Similarity=0.095 Sum_probs=67.5
Q ss_pred CCCcE----EEEEeCcccHHHHHHHHHHHHhCCCc--EEEecCCCCcchhHHHHHHhhcCCCCCCcceEEEEecCch---
Q 021698 10 PHPLK----IIAGADSFGAELKDALVSHLRSLNID--VEDLGTSDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGV--- 80 (309)
Q Consensus 10 ~~~mk----I~ig~D~~g~~lk~~l~~~l~~~g~~--v~d~g~~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~--- 80 (309)
..+|| |+.|||. -.+.-++..+.|++.|++ +-=.+.+.-|+--.+.++...+ ...-++|+|.|.
T Consensus 18 ~~~mkp~V~IimGS~S-D~~v~~~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~a~~------~g~~ViIa~AG~aah 90 (181)
T 4b4k_A 18 GSHMKSLVGVIMGSTS-DWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARE------RGLKVIIAGAGGAAH 90 (181)
T ss_dssp ----CCSEEEEESSGG-GHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTT------TTCCEEEEEECSSCC
T ss_pred CCCCCccEEEEECCHh-HHHHHHHHHHHHHHcCCCeeEEEEccccChHHHHHHHHHHHh------cCceEEEEecccccc
Confidence 34566 7888887 467778888999999955 4444556667665666666443 224577777763
Q ss_pred -hhhhhhcCCCceEEEEeCC----HHHHHHHHhh--cCcceeeecccccCHHHHHHHHHHHhcC
Q 021698 81 -GVAIFANKNPGVFATTCLT----PADALNTRSI--NNCNVLAVSGMSTSKESAVEILDTWLKT 137 (309)
Q Consensus 81 -G~~i~aNK~~giraa~~~~----~~~A~~~r~h--NnaNvl~~g~~~~~~~~a~~i~~~~l~~ 137 (309)
.-.++++-..=|.+.-+.. -.++.++-.- .+.=|.+++-..-|..+|--+.-.-|..
T Consensus 91 LpGvvAa~T~~PVIGVPv~s~~l~G~DsLlSivQMP~GvpVaTvaig~~ga~NAallA~qILa~ 154 (181)
T 4b4k_A 91 LPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQILGS 154 (181)
T ss_dssp HHHHHHTTCCSCEEEEECCCTTTTTHHHHHHHHTCCTTCCCEECCSSHHHHHHHHHHHHHHHTT
T ss_pred chhhHHhcCCCCEEEEecCCCCccchhhHHHHHhCCCCCceEEEecCCccHHHHHHHHHHHHcc
Confidence 2235556555566666643 2355555432 2333444444444455554445555554
No 312
>1uz5_A MOEA protein, 402AA long hypothetical molybdopterin biosynthesis MOEA protein; MOEA molybdopterin, MOCF biosynthesis; 2.05A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2
Probab=32.77 E-value=29 Score=32.95 Aligned_cols=92 Identities=20% Similarity=0.188 Sum_probs=50.9
Q ss_pred HHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCcceEEEEecCchhhh------------hhhcCC---Cc
Q 021698 29 ALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVGVA------------IFANKN---PG 91 (309)
Q Consensus 29 ~l~~~l~~~g~~v~d~g~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G~~------------i~aNK~---~g 91 (309)
.|.+.|++.|+++.+++. ++...+...+.+.+.+ +|.-|+--|+|.|-. +...++ ||
T Consensus 211 ~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~------~DlVittGG~s~g~~D~t~~al~~~G~~~f~~va~~PG 284 (402)
T 1uz5_A 211 ALCDAINELGGEGIFMGVARDDKESLKALIEKAVNV------GDVVVISGGASGGTKDLTASVIEELGEVKVHGIAIQPG 284 (402)
T ss_dssp HHHHHHHHHTSEEEEEEEECSSHHHHHHHHHHHHHH------CSEEEEECCC-----CHHHHHHHHHSEEEEECBSEESC
T ss_pred HHHHHHHhCCCeEEEEEEeCCCHHHHHHHHHHHhhC------CCEEEEcCCCCCCCcccHHHHHHhhCCEEEeeEeecCC
Confidence 456677788999999986 4555666666666543 577777777776621 111211 11
Q ss_pred eEEEEeCCHHHHHHHHhhcCcceeeecccccCHHHHHH-HHHHHhc
Q 021698 92 VFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVE-ILDTWLK 136 (309)
Q Consensus 92 iraa~~~~~~~A~~~r~hNnaNvl~~g~~~~~~~~a~~-i~~~~l~ 136 (309)
=.. +.-..++.-|++|++.-.+.....+ ++.-+|.
T Consensus 285 ~p~----------~~g~~~~~~v~~LPG~P~sa~~~~~~~v~P~L~ 320 (402)
T 1uz5_A 285 KPT----------IIGVIKGKPVFGLPGYPTSCLTNFTLLVVPLLL 320 (402)
T ss_dssp TTC----------EEEEETTEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCE----------EEEEECCEEEEECCCCHHHHHHHHHHHHHHHHH
Confidence 111 1112367789999998666655444 3444443
No 313
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=32.76 E-value=1.1e+02 Score=24.09 Aligned_cols=66 Identities=9% Similarity=0.016 Sum_probs=45.7
Q ss_pred CCcEEEEEeCccc---HHHHHHHHHHHHhCCCcEEEecCCC-CcchhHHHHHHhhcCCCCCCcceEEEEecCch
Q 021698 11 HPLKIIAGADSFG---AELKDALVSHLRSLNIDVEDLGTSD-YYSIGAEVGRRVSSSDSSETTTRGLVACGTGV 80 (309)
Q Consensus 11 ~~mkI~ig~D~~g---~~lk~~l~~~l~~~g~~v~d~g~~~-y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~ 80 (309)
++..|+|.+ |.. -.+++.+..-+-+..++.+|+..++ ..++-.++.+.+.+- ...+-.|+++--|-
T Consensus 3 ~~igiiivs-HG~~~A~~l~~~a~~i~G~~~~~aid~~~~~~~~~~~~~i~~~i~~~---d~~~GVLiL~DmGS 72 (130)
T 3gx1_A 3 AQVEVIVMM-HGRSTATSMVETVQELLSIESGIALDMPLTVEVKAMYEKLKQTVVKL---NPVKGVLILSDMGS 72 (130)
T ss_dssp SSCEEEEEE-ESSSHHHHHHHHHHHHHTCCCCEEEEECTTSCHHHHHHHHHHHHHTS---CCTTCEEEEECSGG
T ss_pred CceEEEEEc-CCHHHHHHHHHHHHHHcCccCEEEEEecCCCCHHHHHHHHHHHHHhh---CCCCCEEEEEeCCC
Confidence 445677765 544 5889988888877889999998874 445777787777752 33445566666653
No 314
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=32.49 E-value=81 Score=27.27 Aligned_cols=55 Identities=16% Similarity=0.053 Sum_probs=33.2
Q ss_pred ccEEEEEEeCEEEEEEEe--CC---eEEEecCCcEEEEC---CCC--cEEEEEcCCeEEEEEEcC
Q 021698 233 FGHDLVVLEGKKSVWNLT--KG---ERFDLTVGDYLFTP---AGD--VHRVKYYEETEFFIKWDG 287 (309)
Q Consensus 233 ~~e~vyVl~G~l~v~~~~--~~---~~~~L~pGd~i~iP---~g~--~H~~~n~~d~~~~i~~~g 287 (309)
...+.+|++|++++.... ++ ....+.+||++=-- .+. ...+.+.+++.++.+...
T Consensus 198 ~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~i~~~ 262 (299)
T 3shr_A 198 GDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWFGEKALQGEDVRTANVIAAEAVTCLVIDRD 262 (299)
T ss_dssp ECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEECGGGGSSSEECSSEEEESSSEEEEEEEHH
T ss_pred CCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEeChHHHhCCCCcceEEEECCCEEEEEEeHH
Confidence 346778999999984221 12 24678999977311 122 235667777777655443
No 315
>3p9z_A Uroporphyrinogen III cosynthase (HEMD); MCSG, PSI2, structural genomics, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.10A {Helicobacter pylori}
Probab=32.37 E-value=1.4e+02 Score=25.21 Aligned_cols=104 Identities=8% Similarity=-0.013 Sum_probs=56.6
Q ss_pred EEEEeCcccHHHHHHHHHHHHhCCCcEEEecCCC--CcchhHHHHHHhhcCCCCCCcceEEEEecCchhhhhhhcC-CCc
Q 021698 15 IIAGADSFGAELKDALVSHLRSLNIDVEDLGTSD--YYSIGAEVGRRVSSSDSSETTTRGLVACGTGVGVAIFANK-NPG 91 (309)
Q Consensus 15 I~ig~D~~g~~lk~~l~~~l~~~g~~v~d~g~~~--y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G~~i~aNK-~~g 91 (309)
+++.++.. .+.|.+.|++.|++|..+=.+. .++......+.+.. +..+--++...+++--.+...+ ..+
T Consensus 114 L~~rg~~~----~~~L~~~L~~~G~~v~~~~vY~~~~~~~~~~~~~~l~~----~~~d~v~ftS~s~v~~~~~~~~~~~~ 185 (229)
T 3p9z_A 114 LYLRAKEI----VSSLDTILLEHGIDFKQAVVYENKLKHLTLSEQNALKP----KEKSILIFTAISHAKAFLHYFEFLEN 185 (229)
T ss_dssp EEEEESSC----SSCHHHHHHHTTCEEEEEEEEEEEECCCCHHHHHHHSC----CTTCEEEECSHHHHHHHHHHSCCCTT
T ss_pred EEECCccc----hHHHHHHHHHCCCeEEEEEEEEeeCCCccHHHHHHHhc----CCCeEEEEECHHHHHHHHHHhCcccC
Confidence 34445554 3556778889999999887652 12222233445544 5555433333444333333222 235
Q ss_pred eEEEEeCCHHHHHHHHhhcCcceeeecccccCHHHHHH
Q 021698 92 VFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVE 129 (309)
Q Consensus 92 iraa~~~~~~~A~~~r~hNnaNvl~~g~~~~~~~~a~~ 129 (309)
++.+ |-.+.+|+.++++ +-+|. +..+.....+...
T Consensus 186 ~~~~-aIG~~Ta~~l~~~-G~~v~-va~~~~~e~ll~~ 220 (229)
T 3p9z_A 186 YTAI-SIGNTTALYLQEQ-GIPSY-IAKKPSLEACLEL 220 (229)
T ss_dssp CEEE-ESSHHHHHHHHHT-TCCEE-ECSSSSHHHHHHH
T ss_pred CEEE-EECHHHHHHHHHc-CCCce-eCCCCCHHHHHHH
Confidence 5544 7778888888887 34554 5555544444333
No 316
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=32.24 E-value=47 Score=30.00 Aligned_cols=41 Identities=7% Similarity=-0.011 Sum_probs=28.6
Q ss_pred CCCCCCcEEEEEeCcccHHHH--HHHHHHHHhCCCcEEEecCC
Q 021698 7 AAAPHPLKIIAGADSFGAELK--DALVSHLRSLNIDVEDLGTS 47 (309)
Q Consensus 7 ~~~~~~mkI~ig~D~~g~~lk--~~l~~~l~~~g~~v~d~g~~ 47 (309)
.....+|||++.+-..+=.+. -.|.+.|++.||+|.=++..
T Consensus 15 ~~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~ 57 (412)
T 3otg_A 15 HIEGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGE 57 (412)
T ss_dssp ---CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECG
T ss_pred CcccceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccH
Confidence 344567999988855444442 36788999999999988764
No 317
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=31.66 E-value=45 Score=30.42 Aligned_cols=40 Identities=10% Similarity=0.025 Sum_probs=26.6
Q ss_pred cCCCCCCcEEEEEeCc------------ccHHH-HHHHHHHHHhCCCcEEEec
Q 021698 6 DAAAPHPLKIIAGADS------------FGAEL-KDALVSHLRSLNIDVEDLG 45 (309)
Q Consensus 6 ~~~~~~~mkI~ig~D~------------~g~~l-k~~l~~~l~~~g~~v~d~g 45 (309)
.....++|||++-+++ .|.+. -..|.++|.+.||+|.=+.
T Consensus 14 ~~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~ 66 (438)
T 3c48_A 14 LVPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYT 66 (438)
T ss_dssp -----CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEe
Confidence 4445677999999964 45543 4678889999999998554
No 318
>3kp1_A D-ornithine aminomutase E component; 5 aminomutase (OAM), metal binding protein; HET: PLP B12 5AD; 2.01A {Clostridium sticklandii} PDB: 3kow_A* 3koy_A* 3koz_A* 3kp0_A* 3kox_A*
Probab=31.24 E-value=21 Score=36.53 Aligned_cols=40 Identities=30% Similarity=0.433 Sum_probs=29.0
Q ss_pred CCcEEEEEe---CcccHHHHH---HHHHHHHhCCCcEEEecCCCCc
Q 021698 11 HPLKIIAGA---DSFGAELKD---ALVSHLRSLNIDVEDLGTSDYY 50 (309)
Q Consensus 11 ~~mkI~ig~---D~~g~~lk~---~l~~~l~~~g~~v~d~g~~~y~ 50 (309)
++.||++|+ |-=-..+|. .+...|+..||+|+|+|.+--+
T Consensus 601 ~kGKVVIATVgGD~HDIGKklVaNIVa~~LE~aGFEVIDLGvdVPp 646 (763)
T 3kp1_A 601 TPLKIVAATVGEDEHSVGLREVIDIKHGGIEKYGVEVHYLGTSVPV 646 (763)
T ss_dssp SCCEEEEEEBTTCCCCHHHHHTTSTTTTCGGGGTCEEEECCSSBCH
T ss_pred cCCEEEEEeCCCChhhhhhHHHHHHHHHHHHhCCCEEEECCCCCCH
Confidence 467999996 654555542 2357899999999999997443
No 319
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=31.14 E-value=1.7e+02 Score=22.01 Aligned_cols=36 Identities=8% Similarity=0.107 Sum_probs=26.4
Q ss_pred cCCCCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021698 6 DAAAPHPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 6 ~~~~~~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d 43 (309)
|+...+++||.|..|+. ...+.+...|+..||+|.-
T Consensus 1 Ms~~~~~~~iLivdd~~--~~~~~l~~~L~~~g~~v~~ 36 (154)
T 2rjn_A 1 MSLNYKNYTVMLVDDEQ--PILNSLKRLIKRLGCNIIT 36 (154)
T ss_dssp ---CCSCCEEEEECSCH--HHHHHHHHHHHTTTCEEEE
T ss_pred CCCCCCCCeEEEEcCCH--HHHHHHHHHHHHcCCeEEE
Confidence 34445678999998885 4557888899999999874
No 320
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=31.02 E-value=89 Score=25.71 Aligned_cols=74 Identities=11% Similarity=-0.032 Sum_probs=45.0
Q ss_pred EEEEEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CCe---EEEecCCcEEEE-----CCCCcEEEEEcCCeEEEEEEc
Q 021698 216 AIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KGE---RFDLTVGDYLFT-----PAGDVHRVKYYEETEFFIKWD 286 (309)
Q Consensus 216 ~~v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~~---~~~L~pGd~i~i-----P~g~~H~~~n~~d~~~~i~~~ 286 (309)
...++++|..+-..-.+...+.+|++|.+.+.... +++ ...+.|||++-. .....+.+.+.+++.++.+..
T Consensus 34 ~~~~~~~g~~i~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~~~~~v~~i~~ 113 (232)
T 2gau_A 34 QPFPCKKASTVFSEGDIPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGMRPYFAEETCSSTAIAVENSKVLAIPV 113 (232)
T ss_dssp EEEEECTTCEEECTTCCCCEEEEEEESCEEEEC-----CCCEEEEECTTCEESHHHHHHTSCCSSEEEESSCEEEEEEEH
T ss_pred eEEEECCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeeeehhhCCCCcceEEEEecceEEEEEEH
Confidence 35677787766433334556788999999983111 222 358899997632 122456778888888765544
Q ss_pred CCc
Q 021698 287 GRW 289 (309)
Q Consensus 287 g~~ 289 (309)
..+
T Consensus 114 ~~~ 116 (232)
T 2gau_A 114 EAI 116 (232)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 321
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=30.40 E-value=1.7e+02 Score=21.69 Aligned_cols=31 Identities=23% Similarity=0.111 Sum_probs=24.1
Q ss_pred CCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021698 11 HPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 11 ~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d 43 (309)
+++||.|..|+.. ..+.|++.|++.||+|.-
T Consensus 4 ~~~~ilivdd~~~--~~~~l~~~L~~~g~~v~~ 34 (140)
T 3h5i_A 4 KDKKILIVEDSKF--QAKTIANILNKYGYTVEI 34 (140)
T ss_dssp --CEEEEECSCHH--HHHHHHHHHHHTTCEEEE
T ss_pred CCcEEEEEeCCHH--HHHHHHHHHHHcCCEEEE
Confidence 3568999999864 457888999999999874
No 322
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=30.15 E-value=1.6e+02 Score=21.47 Aligned_cols=31 Identities=23% Similarity=0.034 Sum_probs=24.5
Q ss_pred CcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEe
Q 021698 12 PLKIIAGADSFGAELKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 12 ~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~ 44 (309)
++||.|..|+. ...+.+++.|++.||+|.-+
T Consensus 3 ~~~ilivdd~~--~~~~~l~~~L~~~g~~v~~~ 33 (140)
T 2qr3_A 3 LGTIIIVDDNK--GVLTAVQLLLKNHFSKVITL 33 (140)
T ss_dssp CCEEEEECSCH--HHHHHHHHHHTTTSSEEEEE
T ss_pred CceEEEEeCCH--HHHHHHHHHHHhCCcEEEEe
Confidence 46899998884 45678889999999998743
No 323
>2lk2_A Homeobox protein TGIF1; NESG, structural genomics, northeast structural genomics CON PSI-biology, transcription; NMR {Homo sapiens}
Probab=29.97 E-value=6.8 Score=29.59 Aligned_cols=40 Identities=25% Similarity=0.259 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCchhhHHHHhHhhhhcccc
Q 021698 124 KESAVEILDTWLKTPFKAPCPASGLKPWDEKLSCFFDKSMTEM 166 (309)
Q Consensus 124 ~~~a~~i~~~~l~~~f~~~~~~~~~~~~l~~I~~~l~~s~~el 166 (309)
+..+.+|+..||..-+..|||...-. .+++.-+|.+...+
T Consensus 13 ~~~~~~iL~~W~~~h~~npYPs~~ek---~~LA~~tgLt~~QV 52 (89)
T 2lk2_A 13 PKESVQILRDWLYEHRYNAYPSEQEK---ALLSQQTHLSTLQV 52 (89)
T ss_dssp CHHHHHHHHHHHHHTSGGGSCCHHHH---HHHHHHSSSCHHHH
T ss_pred CHHHHHHHHHHHHHhccCCCCCHHHH---HHHHHHHCcCHHHH
Confidence 45788999999998888888876654 66777776665544
No 324
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=29.90 E-value=32 Score=31.11 Aligned_cols=80 Identities=20% Similarity=0.236 Sum_probs=48.7
Q ss_pred HHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCcceEEEE----ecCchhh------hhhhc---C-CCceEEEEeC
Q 021698 33 HLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSETTTRGLVA----CGTGVGV------AIFAN---K-NPGVFATTCL 98 (309)
Q Consensus 33 ~l~~~g~~v~d~g~~~y~~~a~~va~~v~~~~~~~~~~~gi~~----cgtG~G~------~i~aN---K-~~giraa~~~ 98 (309)
.|.+.|++|+.+-+.|. .+|+++.+. |.. .|+- =|||.|+ ..... + +|=|-++=+.
T Consensus 119 ~L~k~Gf~Vlpy~~~D~-----~~ak~l~~~---G~~--aVmPlg~pIGsG~Gi~~~~~L~~i~~~~~~~vPVI~~GGI~ 188 (268)
T 2htm_A 119 RLIEEDFLVLPYMGPDL-----VLAKRLAAL---GTA--TVMPLAAPIGSGWGVRTRALLELFAREKASLPPVVVDAGLG 188 (268)
T ss_dssp HHHHTTCEECCEECSCH-----HHHHHHHHH---TCS--CBEEBSSSTTTCCCSTTHHHHHHHHHTTTTSSCBEEESCCC
T ss_pred HHHHCCCEEeeccCCCH-----HHHHHHHhc---CCC--EEEecCccCcCCcccCCHHHHHHHHHhcCCCCeEEEeCCCC
Confidence 35566888875433222 444444431 222 2222 2788877 22222 5 7777788888
Q ss_pred CHHHHHHHHhhcCcceeeecccccC
Q 021698 99 TPADALNTRSINNCNVLAVSGMSTS 123 (309)
Q Consensus 99 ~~~~A~~~r~hNnaNvl~~g~~~~~ 123 (309)
++.+|..+.+ -+|.-+-+|..++.
T Consensus 189 tpsDAa~Ame-LGAdgVlVgSAI~~ 212 (268)
T 2htm_A 189 LPSHAAEVME-LGLDAVLVNTAIAE 212 (268)
T ss_dssp SHHHHHHHHH-TTCCEEEESHHHHT
T ss_pred CHHHHHHHHH-cCCCEEEEChHHhC
Confidence 8888888887 46777777777776
No 325
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=29.42 E-value=89 Score=24.44 Aligned_cols=32 Identities=19% Similarity=0.263 Sum_probs=25.7
Q ss_pred CCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021698 10 PHPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 10 ~~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d 43 (309)
++.|||.|.=|+. ...+.++..|++.||++++
T Consensus 10 ~k~~rILiVDD~~--~~r~~l~~~L~~~G~~~v~ 41 (134)
T 3to5_A 10 NKNMKILIVDDFS--TMRRIVKNLLRDLGFNNTQ 41 (134)
T ss_dssp CTTCCEEEECSCH--HHHHHHHHHHHHTTCCCEE
T ss_pred CCCCEEEEEeCCH--HHHHHHHHHHHHcCCcEEE
Confidence 4668999998875 4457899999999998665
No 326
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=29.36 E-value=1.5e+02 Score=24.98 Aligned_cols=80 Identities=10% Similarity=0.129 Sum_probs=48.6
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcE--EEecCCCCcchhHHHHHHhhcCCCCCCcceEEEEecCch----hhhhhh
Q 021698 13 LKIIAGADSFGAELKDALVSHLRSLNIDV--EDLGTSDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGV----GVAIFA 86 (309)
Q Consensus 13 mkI~ig~D~~g~~lk~~l~~~l~~~g~~v--~d~g~~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~----G~~i~a 86 (309)
.-|+.||+. -.+.-++..+.|++.|+++ -=.|.+.-|+--.+.++...+ . ..-++|++.|. .--+++
T Consensus 15 V~IimGS~S-D~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~l~~~~~~a~~----~--g~~ViIa~AG~aahLpgvvA~ 87 (173)
T 4grd_A 15 VGVLMGSSS-DWDVMKHAVAILQEFGVPYEAKVVSAHRMPDEMFDYAEKARE----R--GLRAIIAGAGGAAHLPGMLAA 87 (173)
T ss_dssp EEEEESSGG-GHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHTT----T--TCSEEEEEEESSCCHHHHHHH
T ss_pred EEEEeCcHh-HHHHHHHHHHHHHHcCCCEEEEEEccccCHHHHHHHHHHHHh----c--CCeEEEEeccccccchhhhee
Confidence 457777775 6677788889999999663 333445566666666666543 1 22367777773 223445
Q ss_pred cCCCceEEEEeCC
Q 021698 87 NKNPGVFATTCLT 99 (309)
Q Consensus 87 NK~~giraa~~~~ 99 (309)
+--.=|.+.-+..
T Consensus 88 ~t~~PVIgVPv~~ 100 (173)
T 4grd_A 88 KTTVPVLGVPVAS 100 (173)
T ss_dssp HCCSCEEEEEECC
T ss_pred cCCCCEEEEEcCC
Confidence 5555555555544
No 327
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=29.17 E-value=1.5e+02 Score=27.46 Aligned_cols=70 Identities=13% Similarity=-0.011 Sum_probs=41.4
Q ss_pred EEEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CC-----eEEEecCCcEEEECC----CCcEEEEEcCCeEEEEEEcC
Q 021698 218 VRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KG-----ERFDLTVGDYLFTPA----GDVHRVKYYEETEFFIKWDG 287 (309)
Q Consensus 218 v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~-----~~~~L~pGd~i~iP~----g~~H~~~n~~d~~~~i~~~g 287 (309)
..+++|..+-..-.+...+.+|++|.+.+.... ++ ....+.|||++=-.+ -..+.+.+.+++.++.+...
T Consensus 68 ~~~~~g~~i~~~Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe~~l~~~~~~~tv~A~~~~~l~~i~~~ 147 (469)
T 1o7f_A 68 ENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGESILDNTPRHATIVTRESSELLRIEQE 147 (469)
T ss_dssp EEECTTCEEECTTSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECGGGGGTCBCSSEEEESSSEEEEEEEHH
T ss_pred EEECCCCEEEeCCCCCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcchhhhCCCCccceEEEccceeEEEEcHH
Confidence 355555554222223456778999999984221 22 236888999774322 23456777788887655433
No 328
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=28.96 E-value=69 Score=26.34 Aligned_cols=33 Identities=15% Similarity=0.175 Sum_probs=24.6
Q ss_pred CCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021698 9 APHPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 9 ~~~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d 43 (309)
..++|||.|..|+.. ..+.|...|+..||+|.-
T Consensus 4 ~~~~~~ilivdd~~~--~~~~l~~~L~~~g~~v~~ 36 (233)
T 1ys7_A 4 GVTSPRVLVVDDDSD--VLASLERGLRLSGFEVAT 36 (233)
T ss_dssp ---CCEEEEECSCHH--HHHHHHHHHHHTTCEEEE
T ss_pred CCCCCeEEEEeCCHH--HHHHHHHHHHhCCCEEEE
Confidence 345689999999864 457788888889999874
No 329
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=28.80 E-value=23 Score=26.76 Aligned_cols=52 Identities=21% Similarity=0.215 Sum_probs=32.4
Q ss_pred ccEEEEEEeCEEEEEEEeCCeE---E--EecCCcEEE-------ECCC-------CcEEEEEcCCeEEEEE
Q 021698 233 FGHDLVVLEGKKSVWNLTKGER---F--DLTVGDYLF-------TPAG-------DVHRVKYYEETEFFIK 284 (309)
Q Consensus 233 ~~e~vyVl~G~l~v~~~~~~~~---~--~L~pGd~i~-------iP~g-------~~H~~~n~~d~~~~i~ 284 (309)
...+.+|++|.+++....+++. . .+.+||++= +... ....+.+.+++.++.+
T Consensus 47 ~~~~y~i~~G~v~~~~~~~g~~~~~~~~~l~~G~~fGe~~l~~~~~~~~~~~~~~~~~~~~A~~~~~~~~i 117 (137)
T 1wgp_A 47 VNEMLFIIRGRLESVTTDGGRSGFYNRSLLKEGDFCGDELLTWALDPKSGSNLPSSTRTVKALTEVEAFAL 117 (137)
T ss_dssp CSEEEEEEECCCEEECCSSCSSSSSCEEECCTTCBSSTHHHHHHHCSSCCSSSCBCSSEEEESSCBEEEEE
T ss_pred CCeEEEEEeeEEEEEEcCCCcceeeeeeeecCCCEecHHHHHHHhccccccccccceeEEEEeEEEEEEEE
Confidence 3457789999999731122332 2 888999752 3322 1357788888877543
No 330
>1wu2_A MOEA protein, molybdopterin biosynthesis MOEA protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.30A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1xi8_A
Probab=28.76 E-value=28 Score=33.08 Aligned_cols=34 Identities=12% Similarity=-0.018 Sum_probs=25.0
Q ss_pred HHHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhh
Q 021698 28 DALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVS 61 (309)
Q Consensus 28 ~~l~~~l~~~g~~v~d~g~--~~y~~~a~~va~~v~ 61 (309)
..|.+.|++.|+++.++|. ++...+...+.+.+.
T Consensus 214 ~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~ 249 (396)
T 1wu2_A 214 IMLQGLVEKFFGEPILYGVLPDDESIIKETLEKAKN 249 (396)
T ss_dssp HHHHHHHHHTTCEEEEEEEECSCHHHHTTHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHhh
Confidence 4678888999999999986 455566666666554
No 331
>3ncv_A DNA mismatch repair protein MUTL; endonuclease, dimer, hydrolase; HET: DNA; 2.40A {Neisseria gonorrhoeae}
Probab=28.61 E-value=2.8e+02 Score=23.74 Aligned_cols=120 Identities=13% Similarity=0.150 Sum_probs=68.4
Q ss_pred EEEEeCcccHHHHHHHHHHHHhCCCcEEEecCCCC-----c------chhHHHHHHhhcCCCCCCcceEEEEecCchhhh
Q 021698 15 IIAGADSFGAELKDALVSHLRSLNIDVEDLGTSDY-----Y------SIGAEVGRRVSSSDSSETTTRGLVACGTGVGVA 83 (309)
Q Consensus 15 I~ig~D~~g~~lk~~l~~~l~~~g~~v~d~g~~~y-----~------~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G~~ 83 (309)
+.+-=+..-..+-+..++.|++.|+++..+|.++| | +. ..+-+.+.+...+....
T Consensus 85 ~~l~Ls~~e~~~l~~~~~~L~~lGf~ie~fg~~~v~V~~vP~~l~~~d~-~~ll~~ll~~l~~~~~~------------- 150 (220)
T 3ncv_A 85 VTFAASHEECAALADHAETLAGFGLELSDMGGNTLAVRAAPVMLGKSDV-VSLARDVLGELAQVGSS------------- 150 (220)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHTTCEEECCSTTEEEEEEEETTSCCSCH-HHHHHHHHHHHTTCC---------------
T ss_pred eEEEcCHHHHHHHHHHHHHHHhCCCEEEECCCCEEEEEEcCcccCCCCH-HHHHHHHHHHHHhcCCC-------------
Confidence 44445555667778888999999999999997631 1 12 22222222200001000
Q ss_pred hhhcCCCceEEEEeCCHHHHHHHHhhcCcceeeecccccCHHHHHHHHHHHhcCCCCCCCCCCCCch---hhHHHHhHhh
Q 021698 84 IFANKNPGVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEILDTWLKTPFKAPCPASGLKP---WDEKLSCFFD 160 (309)
Q Consensus 84 i~aNK~~giraa~~~~~~~A~~~r~hNnaNvl~~g~~~~~~~~a~~i~~~~l~~~f~~~~~~~~~~~---~l~~I~~~l~ 160 (309)
....+.....++.. -|.--.+.++.++.+.+.++++.+..+++-.-||-++-.- ..++|...|+
T Consensus 151 -----------~~~~~~~~~~~as~--ACr~AIk~g~~Ls~~Em~~Ll~~L~~~~~P~~CPHGRPt~i~ls~~eLek~F~ 217 (220)
T 3ncv_A 151 -----------QTIASHENRILATM--SCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDTLFL 217 (220)
T ss_dssp --------------CTTHHHHHHHH--TTCSSSCSSCCCCHHHHHHHHHHHHTSTTTTBCTTSCBSEEEEEHHHHHHTC-
T ss_pred -----------cchHHHHHHHHHHH--HHHhhhhcCCCCCHHHHHHHHHHHHhCCCCCcCCCCCcEEEEeCHHHHHHHhC
Confidence 00111122222211 1333456678899999999999999999988899988442 2355555554
Q ss_pred h
Q 021698 161 K 161 (309)
Q Consensus 161 ~ 161 (309)
+
T Consensus 218 R 218 (220)
T 3ncv_A 218 R 218 (220)
T ss_dssp -
T ss_pred C
Confidence 3
No 332
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=28.56 E-value=60 Score=26.31 Aligned_cols=24 Identities=4% Similarity=-0.117 Sum_probs=20.6
Q ss_pred eEEEecCCcEEEECCCCcEEEEEc
Q 021698 253 ERFDLTVGDYLFTPAGDVHRVKYY 276 (309)
Q Consensus 253 ~~~~L~pGd~i~iP~g~~H~~~n~ 276 (309)
....|.||+++.+-|+.+|+..+.
T Consensus 112 ~~v~l~~G~FaiFfP~d~H~p~~~ 135 (155)
T 1s4c_A 112 FTVTMKPKMFAVFYPYEPHKPCCV 135 (155)
T ss_dssp EEEEECTTEEEEECTTCCEEEEEC
T ss_pred EEEEeCCCEEEEECCCcccccccc
Confidence 456789999999999999998665
No 333
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=28.44 E-value=1.8e+02 Score=24.93 Aligned_cols=37 Identities=11% Similarity=0.012 Sum_probs=23.9
Q ss_pred cCCCCCCcEEEEEeCcc---------cHHHHHHHHHHHHhCCCcEE
Q 021698 6 DAAAPHPLKIIAGADSF---------GAELKDALVSHLRSLNIDVE 42 (309)
Q Consensus 6 ~~~~~~~mkI~ig~D~~---------g~~lk~~l~~~l~~~g~~v~ 42 (309)
|.....+|||.|-.-|- --.|.+.+++.|++.|++|.
T Consensus 19 ~~~~~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~ 64 (218)
T 3rpe_A 19 YFQSNAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVK 64 (218)
T ss_dssp C----CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEE
T ss_pred ccccccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEE
Confidence 55555566877766553 23778889999999997765
No 334
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=28.43 E-value=49 Score=29.66 Aligned_cols=39 Identities=21% Similarity=0.371 Sum_probs=27.9
Q ss_pred CCcEEEEEe---CcccHHHHHHHHHH--------HHhC-CCcEEEecCCCCc
Q 021698 11 HPLKIIAGA---DSFGAELKDALVSH--------LRSL-NIDVEDLGTSDYY 50 (309)
Q Consensus 11 ~~mkI~ig~---D~~g~~lk~~l~~~--------l~~~-g~~v~d~g~~~y~ 50 (309)
++.||++++ |.--..+ +.+... |+.. ||+|+|+|.+--+
T Consensus 119 ~~~~Vvlatv~gD~HdiG~-~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~ 169 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGI-DAIMNMKGYAGHYGLERYEMIDAYNLGSQVAN 169 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHH-HHHHSTTCBTTBCCGGGCTTEEEEECCSSBCH
T ss_pred CCCEEEEEeCCCCCchHHH-HHHhhhhcccchHHHHhcCCcEEEECCCCCCH
Confidence 455898887 5444443 556666 9999 9999999995433
No 335
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=27.99 E-value=2.1e+02 Score=22.21 Aligned_cols=118 Identities=9% Similarity=-0.007 Sum_probs=63.9
Q ss_pred HHHHHHHHHhC-CCcEEEe--cCCCCcchhHHHHHHhhcCCCCCCcceEEEEecCchhhhhh---hcCCCceEEEEeCCH
Q 021698 27 KDALVSHLRSL-NIDVEDL--GTSDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVGVAIF---ANKNPGVFATTCLTP 100 (309)
Q Consensus 27 k~~l~~~l~~~-g~~v~d~--g~~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G~~i~---aNK~~giraa~~~~~ 100 (309)
...+.+.|.+. ||.|+=+ -..+.++++..+...+.. . +. +.-+.+.|...|-.++ |.+.| |++.+..++
T Consensus 24 ~~~~~~~l~~~~g~~vi~~d~~g~~~~~~~~~~~~~~~~-l--~~-~~~~~lvG~S~Gg~ia~~~a~~~p-v~~lvl~~~ 98 (194)
T 2qs9_A 24 YGWVKKELEKIPGFQCLAKNMPDPITARESIWLPFMETE-L--HC-DEKTIIIGHSSGAIAAMRYAETHR-VYAIVLVSA 98 (194)
T ss_dssp HHHHHHHHTTSTTCCEEECCCSSTTTCCHHHHHHHHHHT-S--CC-CTTEEEEEETHHHHHHHHHHHHSC-CSEEEEESC
T ss_pred HHHHHHHHhhccCceEEEeeCCCCCcccHHHHHHHHHHH-h--Cc-CCCEEEEEcCcHHHHHHHHHHhCC-CCEEEEEcC
Confidence 34477888887 9999843 222233444444443332 1 22 1224455655554443 55777 877776554
Q ss_pred HHH------H-H-----------HHhhcCcceeeeccc---ccCHHHHHHHHHHHhcCCCCCCCCCCCCchh
Q 021698 101 ADA------L-N-----------TRSINNCNVLAVSGM---STSKESAVEILDTWLKTPFKAPCPASGLKPW 151 (309)
Q Consensus 101 ~~A------~-~-----------~r~hNnaNvl~~g~~---~~~~~~a~~i~~~~l~~~f~~~~~~~~~~~~ 151 (309)
... . + .-..+...+|.+.+. ++.++.+.++.+.+ +.++.- +|..++...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lii~G~~D~~vp~~~~~~~~~~~-~~~~~~-~~~~gH~~~ 168 (194)
T 2qs9_A 99 YTSDLGDENERASGYFTRPWQWEKIKANCPYIVQFGSTDDPFLPWKEQQEVADRL-ETKLHK-FTDCGHFQN 168 (194)
T ss_dssp CSSCTTCHHHHHTSTTSSCCCHHHHHHHCSEEEEEEETTCSSSCHHHHHHHHHHH-TCEEEE-ESSCTTSCS
T ss_pred CccccchhhhHHHhhhcccccHHHHHhhCCCEEEEEeCCCCcCCHHHHHHHHHhc-CCeEEE-eCCCCCccc
Confidence 210 0 0 001123457777655 78889999988887 765542 333455443
No 336
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=27.82 E-value=72 Score=29.73 Aligned_cols=68 Identities=18% Similarity=0.113 Sum_probs=42.7
Q ss_pred EEEcCCCcCCccccCccEEEEEEeCEEEEEEEeCC--eEEEecCCcEEEEC---CC--CcEEEEEcC-CeEEEEEEcC
Q 021698 218 VRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKG--ERFDLTVGDYLFTP---AG--DVHRVKYYE-ETEFFIKWDG 287 (309)
Q Consensus 218 v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~~~--~~~~L~pGd~i~iP---~g--~~H~~~n~~-d~~~~i~~~g 287 (309)
..+++|..+-..-.+...+.+|++|.+++ ...+ ....+.+||++--- .+ ....+.+.+ ++.++.+...
T Consensus 364 ~~~~~g~~i~~~G~~~~~~yiI~~G~v~v--~~~~~~~~~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~~~~~i~~~ 439 (469)
T 1o7f_A 364 SHAKGGTVLFNQGEEGTSWYIILKGSVNV--VIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKE 439 (469)
T ss_dssp EECSTTCEEECTTSCCCEEEEEEESEEEE--EETTTEEEEEEETTCEECGGGGTCCSCCSSEEEESSSSEEEEEEEHH
T ss_pred eEecCCCEEEeCCCcCCeEEEEEEeEEEE--EEcCCeeEEEecCCCEEEEehhhcCCCceEEEEEecCCEEEEEEcHH
Confidence 35677776643334556788899999999 4433 46789999976321 12 233566666 5776654433
No 337
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=27.73 E-value=2.9e+02 Score=24.23 Aligned_cols=82 Identities=13% Similarity=0.039 Sum_probs=48.4
Q ss_pred CCcEEEEEeC-------cccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCcceEEEEecCchhh-
Q 021698 11 HPLKIIAGAD-------SFGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVGV- 82 (309)
Q Consensus 11 ~~mkI~ig~D-------~~g~~lk~~l~~~l~~~g~~v~d~g~~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G~- 82 (309)
++.+|++-.+ ..-..+-+.+.+.+++.||+++-+-+.+-.+. ...-+.+.+ ..+ -||++++....-
T Consensus 3 ~~~~Ig~v~~~g~~~d~~f~~~~~~Gi~~~~~~~g~~~~~~~~~~~~~~-~~~l~~l~~----~~~-dgIi~~~~~~~~~ 76 (318)
T 2fqx_A 3 GDFVVGMVTDSGDIDDKSFNQQVWEGISRFAQENNAKCKYVTASTDAEY-VPSLSAFAD----ENM-GLVVACGSFLVEA 76 (318)
T ss_dssp CCCEEEEEESSSCTTSSSHHHHHHHHHHHHHHHTTCEEEEEECCSGGGH-HHHHHHHHH----TTC-SEEEEESTTTHHH
T ss_pred CCcEEEEEEcCCCCCCccHHHHHHHHHHHHHHHhCCeEEEEeCCCHHHH-HHHHHHHHH----cCC-CEEEECChhHHHH
Confidence 3457776554 12235678888999999999876655433343 334444444 233 478887765432
Q ss_pred -hhhhcCCCceEEEEeC
Q 021698 83 -AIFANKNPGVFATTCL 98 (309)
Q Consensus 83 -~i~aNK~~giraa~~~ 98 (309)
.-.+.++|+|.-.++.
T Consensus 77 ~~~~a~~~p~~p~v~id 93 (318)
T 2fqx_A 77 VIETSARFPKQKFLVID 93 (318)
T ss_dssp HHHHHHHCTTSCEEEES
T ss_pred HHHHHHHCCCCEEEEEc
Confidence 2234566666666664
No 338
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=27.71 E-value=75 Score=25.66 Aligned_cols=40 Identities=18% Similarity=0.257 Sum_probs=24.5
Q ss_pred CCCcccC-CCCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEE
Q 021698 1 MAENADA-AAPHPLKIIAGADSFGAELKDALVSHLRSLNIDVE 42 (309)
Q Consensus 1 ~~~~~~~-~~~~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~ 42 (309)
|+.+... +...++||.|..|+.. ..+.|...|+..||+|+
T Consensus 1 m~~~~~~~~~~m~~~iLivdd~~~--~~~~l~~~L~~~g~~v~ 41 (205)
T 1s8n_A 1 MTGPTTDADAAVPRRVLIAEDEAL--IRMDLAEMLREEGYEIV 41 (205)
T ss_dssp ----------CCCCEEEEECSSHH--HHHHHHHHHHHTTCEEE
T ss_pred CCCCCcccccCCCccEEEEECCHH--HHHHHHHHHHHCCCEEE
Confidence 5555322 2234468999999854 45778888899999988
No 339
>3esg_A HUTD, putative uncharacterized protein; beta barrel, unknown function; 1.80A {Pseudomonas fluorescens} SCOP: b.82.1.0
Probab=27.47 E-value=65 Score=27.58 Aligned_cols=36 Identities=17% Similarity=0.049 Sum_probs=27.8
Q ss_pred cccCccEEEEEEeCEEEEEEEeCCeEEEecCCcEEEECCCCc
Q 021698 229 HHHTFGHDLVVLEGKKSVWNLTKGERFDLTVGDYLFTPAGDV 270 (309)
Q Consensus 229 H~H~~~e~vyVl~G~l~v~~~~~~~~~~L~pGd~i~iP~g~~ 270 (309)
+.+....++|+++|.+++ . . ..|.+||.+++.....
T Consensus 139 ~~~a~~~lv~~~~G~~~v--~--~--~~L~~~D~L~~~~~~~ 174 (193)
T 3esg_A 139 FSTAQTVLVFSVADEVKV--L--G--EKLGHHDCLQVDGNAG 174 (193)
T ss_dssp EECCSEEEEEECSSCEEE--T--T--EEECTTCEEEECSCCS
T ss_pred cCCCCEEEEEEeeCCEEE--E--E--EecCCCCEEEEeCCcc
Confidence 444555688999999998 2 2 8999999999986544
No 340
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=27.41 E-value=89 Score=23.20 Aligned_cols=32 Identities=28% Similarity=0.344 Sum_probs=26.9
Q ss_pred EEEEEeCcccHHHHHHHHHHHHhCCCcEEEe-cC
Q 021698 14 KIIAGADSFGAELKDALVSHLRSLNIDVEDL-GT 46 (309)
Q Consensus 14 kI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~-g~ 46 (309)
-|++++| +.-+.+..|..+-+..+..+..+ ++
T Consensus 34 lViiA~D-~~~~~~~~i~~~c~~~~ip~~~~~~s 66 (99)
T 3j21_Z 34 LIIVAKN-APKEIKDDIYYYAKLSDIPVYEFEGT 66 (99)
T ss_dssp EEEEECC-CCHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred EEEEeCC-CCHHHHHHHHHHHHHcCCCEEEeCCC
Confidence 4888888 78999999999999999998766 54
No 341
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=27.34 E-value=60 Score=28.47 Aligned_cols=36 Identities=28% Similarity=0.274 Sum_probs=27.7
Q ss_pred CcEEEEEeCc-----------------ccHH-HHHHHHHHHHhCCCcEEEecCC
Q 021698 12 PLKIIAGADS-----------------FGAE-LKDALVSHLRSLNIDVEDLGTS 47 (309)
Q Consensus 12 ~mkI~ig~D~-----------------~g~~-lk~~l~~~l~~~g~~v~d~g~~ 47 (309)
+|||++-++. .|.+ .-..+.+.|.+.||+|.=+...
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~ 56 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAP 56 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCT
T ss_pred ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 5899999887 4543 4456888999999999887654
No 342
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=27.32 E-value=56 Score=30.63 Aligned_cols=35 Identities=9% Similarity=0.014 Sum_probs=26.2
Q ss_pred CCcEEEEEeCc----------------ccHH-HHHHHHHHHHhCCCcEEEec
Q 021698 11 HPLKIIAGADS----------------FGAE-LKDALVSHLRSLNIDVEDLG 45 (309)
Q Consensus 11 ~~mkI~ig~D~----------------~g~~-lk~~l~~~l~~~g~~v~d~g 45 (309)
++|||++-+++ .|.+ .-..|.++|.+.||+|.=+.
T Consensus 6 ~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~ 57 (499)
T 2r60_A 6 RIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIIT 57 (499)
T ss_dssp -CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEe
Confidence 46999999985 4553 34678899999999997553
No 343
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=27.20 E-value=68 Score=28.60 Aligned_cols=37 Identities=19% Similarity=0.060 Sum_probs=26.3
Q ss_pred CCCcEEEEEeCc-----ccH-HHHHHHHHHHHhCCCcEEEecC
Q 021698 10 PHPLKIIAGADS-----FGA-ELKDALVSHLRSLNIDVEDLGT 46 (309)
Q Consensus 10 ~~~mkI~ig~D~-----~g~-~lk~~l~~~l~~~g~~v~d~g~ 46 (309)
.++|||.+-++. .|. ..-..+.+.|.+.||+|.=+..
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 60 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAP 60 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEec
Confidence 567999999864 444 3456788899999999986654
No 344
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=27.06 E-value=1.5e+02 Score=26.09 Aligned_cols=64 Identities=11% Similarity=0.128 Sum_probs=41.0
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCCCCcc----------hhHHHHHHhhcCCCCCCcceEEEEe-cCchh
Q 021698 13 LKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTSDYYS----------IGAEVGRRVSSSDSSETTTRGLVAC-GTGVG 81 (309)
Q Consensus 13 mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~g~~~y~~----------~a~~va~~v~~~~~~~~~~~gi~~c-gtG~G 81 (309)
-||.|-+ ...-.+-+.++++|++.|++|+......+++ .-.++++.+.. ..+ -+|++. .|++.
T Consensus 147 ~rvgvlt-p~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~g~~~~~~l~~~~~~l~~----~ga-daIvLg~CT~l~ 220 (273)
T 2xed_A 147 QRVALVT-PYMRPLAEKVVAYLEAEGFTISDWRALEVADNTEVGCIPGEQVMAAARSLDL----SEV-DALVISCAVQMP 220 (273)
T ss_dssp CEEEEEE-CSCHHHHHHHHHHHHHTTCEEEEEEECCCCBHHHHHTCCHHHHHHHHHHSCC----TTC-SEEEEESSSSSC
T ss_pred CeEEEEc-CChhhhHHHHHHHHHHCCCEEeccccCCCccchhhcccCHHHHHHHHHHHhh----CCC-CEEEEcCCCCcc
Confidence 3899988 5556667799999999999998875543322 12334444432 334 455555 77776
Q ss_pred h
Q 021698 82 V 82 (309)
Q Consensus 82 ~ 82 (309)
.
T Consensus 221 ~ 221 (273)
T 2xed_A 221 S 221 (273)
T ss_dssp C
T ss_pred h
Confidence 5
No 345
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=26.82 E-value=62 Score=29.09 Aligned_cols=36 Identities=22% Similarity=0.345 Sum_probs=25.6
Q ss_pred CCcEEEEEeCc-----ccHHHHHHHHHHHHhCCCcE--EEecC
Q 021698 11 HPLKIIAGADS-----FGAELKDALVSHLRSLNIDV--EDLGT 46 (309)
Q Consensus 11 ~~mkI~ig~D~-----~g~~lk~~l~~~l~~~g~~v--~d~g~ 46 (309)
+.|||.|-.-| ....|.+..++.|++.|++| +|+..
T Consensus 21 ~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~DLy~ 63 (280)
T 4gi5_A 21 QSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSDLYA 63 (280)
T ss_dssp -CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEETTT
T ss_pred hCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEEccc
Confidence 56888777544 23478899999999999765 46644
No 346
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=26.79 E-value=52 Score=29.77 Aligned_cols=40 Identities=15% Similarity=0.039 Sum_probs=25.1
Q ss_pred CCCCCCcEEEEEeCcccHHH--HHHHHHHHHhCCCcEEEecC
Q 021698 7 AAAPHPLKIIAGADSFGAEL--KDALVSHLRSLNIDVEDLGT 46 (309)
Q Consensus 7 ~~~~~~mkI~ig~D~~g~~l--k~~l~~~l~~~g~~v~d~g~ 46 (309)
.....+|||++.+....=.+ -..|.+.|++.||+|.=+..
T Consensus 10 ~~~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~ 51 (398)
T 4fzr_A 10 VPRGSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAAS 51 (398)
T ss_dssp -----CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcC
Confidence 34456799999876543332 23678889999999986543
No 347
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=26.71 E-value=1.8e+02 Score=25.04 Aligned_cols=80 Identities=16% Similarity=0.197 Sum_probs=46.7
Q ss_pred CCcEEEEEeCccc---HHHHHHHHHHHHhCCC----c--EEEecCCCCcchhHHHHHHhhcCCCCCCcceEEEEecCchh
Q 021698 11 HPLKIIAGADSFG---AELKDALVSHLRSLNI----D--VEDLGTSDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVG 81 (309)
Q Consensus 11 ~~mkI~ig~D~~g---~~lk~~l~~~l~~~g~----~--v~d~g~~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G 81 (309)
+..+|.|-.|-.. -++.+.+.+.|++.|| + ++-+-++.-++-.....+.+.+ ...| ||+++++..-
T Consensus 7 ~t~~IGvi~~~~~p~~~~~~~gi~~~l~~~Gy~~g~~v~l~~~~~~~~~~~~~~~~~~l~~----~~vD-gII~~~~~~~ 81 (302)
T 2qh8_A 7 KTAKVAVSQIVEHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQFVG----ENPD-VLVGIATPTA 81 (302)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHHHH----TCCS-EEEEESHHHH
T ss_pred CCcEEEEEEeccChhHHHHHHHHHHHHHHcCCCCCCceEEEEecCCCCHHHHHHHHHHHHh----CCCC-EEEECChHHH
Confidence 3446777655332 3678889999999999 4 4333333334444556666665 4555 7888876433
Q ss_pred hhhh--hcCCCceEEE
Q 021698 82 VAIF--ANKNPGVFAT 95 (309)
Q Consensus 82 ~~i~--aNK~~giraa 95 (309)
..+. ..++|=|.+.
T Consensus 82 ~~~~~~~~~iPvV~~~ 97 (302)
T 2qh8_A 82 QALVSATKTIPIVFTA 97 (302)
T ss_dssp HHHHHHCSSSCEEEEE
T ss_pred HHHHhcCCCcCEEEEe
Confidence 2222 2345645554
No 348
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=26.24 E-value=1e+02 Score=22.24 Aligned_cols=32 Identities=22% Similarity=0.338 Sum_probs=24.2
Q ss_pred CCCcEEEEEeCcccHHHHHHHHHHHHhCCC-cEEE
Q 021698 10 PHPLKIIAGADSFGAELKDALVSHLRSLNI-DVED 43 (309)
Q Consensus 10 ~~~mkI~ig~D~~g~~lk~~l~~~l~~~g~-~v~d 43 (309)
.+.|||.|..|+.- ..+.++..|+..|| .|.-
T Consensus 2 ~~~~~ilivdd~~~--~~~~l~~~l~~~~~~~v~~ 34 (128)
T 1jbe_A 2 DKELKFLVVDDFST--MRRIVRNLLKELGFNNVEE 34 (128)
T ss_dssp CTTCCEEEECSCHH--HHHHHHHHHHHTTCCCEEE
T ss_pred CCccEEEEECCCHH--HHHHHHHHHHHcCCcEEEe
Confidence 46689999988754 45788888998998 4543
No 349
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=26.21 E-value=2e+02 Score=23.77 Aligned_cols=68 Identities=6% Similarity=0.099 Sum_probs=39.1
Q ss_pred EEEcCCCcCCccccCccEEEEEEeCEEEEEEEe-CCeE---EEecCCcEEEECC---CC----cEEEEEcC-CeEEEEEE
Q 021698 218 VRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLT-KGER---FDLTVGDYLFTPA---GD----VHRVKYYE-ETEFFIKW 285 (309)
Q Consensus 218 v~l~pG~~~p~H~H~~~e~vyVl~G~l~v~~~~-~~~~---~~L~pGd~i~iP~---g~----~H~~~n~~-d~~~~i~~ 285 (309)
.++++|..+-..--+...+.+|++|.+++.... +|+. ..+ |||++-..+ +. ++...... ++.++.+.
T Consensus 21 ~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~~~~~v~~i~ 99 (238)
T 2bgc_A 21 KQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVISEQATAYVIK 99 (238)
T ss_dssp EEEETTCEEECTTCCCCEEEEEEESEEEEEEECTTSCEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECSSEEEEEEEE
T ss_pred EEECCCCEEEeCCCCCceEEEEEecEEEEEEECCCCCEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEEcceEEEEEe
Confidence 456666655222233456778999999984222 2332 455 899875432 22 46777774 66655443
Q ss_pred c
Q 021698 286 D 286 (309)
Q Consensus 286 ~ 286 (309)
.
T Consensus 100 ~ 100 (238)
T 2bgc_A 100 I 100 (238)
T ss_dssp H
T ss_pred H
Confidence 3
No 350
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=26.08 E-value=1e+02 Score=22.31 Aligned_cols=31 Identities=19% Similarity=0.125 Sum_probs=24.5
Q ss_pred CCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021698 11 HPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 11 ~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d 43 (309)
+++||.|..|+. ...+.++..|+..||+|.-
T Consensus 4 ~~~~ilivdd~~--~~~~~l~~~L~~~g~~v~~ 34 (132)
T 2rdm_A 4 EAVTILLADDEA--ILLLDFESTLTDAGFLVTA 34 (132)
T ss_dssp SSCEEEEECSSH--HHHHHHHHHHHHTTCEEEE
T ss_pred CCceEEEEcCcH--HHHHHHHHHHHHcCCEEEE
Confidence 356899998885 4557888889999999875
No 351
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=26.04 E-value=82 Score=23.80 Aligned_cols=33 Identities=12% Similarity=0.101 Sum_probs=22.7
Q ss_pred CCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEe
Q 021698 10 PHPLKIIAGADSFGAELKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 10 ~~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~ 44 (309)
.+.|||.|.-|+.- ..+.|++.|++.||+|.-+
T Consensus 12 ~~~~~iLivdd~~~--~~~~l~~~L~~~g~~v~~~ 44 (143)
T 3m6m_D 12 VRSMRMLVADDHEA--NRMVLQRLLEKAGHKVLCV 44 (143)
T ss_dssp ---CEEEEECSSHH--HHHHHHHHHHC--CEEEEE
T ss_pred cccceEEEEeCCHH--HHHHHHHHHHHcCCeEEEe
Confidence 45689999999853 4678889999999998753
No 352
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=25.74 E-value=40 Score=32.48 Aligned_cols=62 Identities=16% Similarity=0.190 Sum_probs=42.3
Q ss_pred CcccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCcceEEEEecCchhhhhhhc
Q 021698 20 DSFGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVGVAIFAN 87 (309)
Q Consensus 20 D~~g~~lk~~l~~~l~~~g~~v~d~g~~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G~~i~aN 87 (309)
+--|.++++.|.+.|+++|+.|. +-.-.-.-.+-.++.+... ....-=+|.|||+|.++..|
T Consensus 168 ~~~g~dv~~~L~~al~r~~l~v~-v~al~NDtv~tlla~~y~~-----~~~~iglIlGTG~na~yve~ 229 (451)
T 1bdg_A 168 GVEGHNVAELLQTELDKRELNVK-CVAVVNDTVGTLASCALED-----PKCAVGLIVGTGTNVAYIED 229 (451)
T ss_dssp TCTTSBHHHHHHHHHHTTTCCEE-EEEEECHHHHHHHHHHTTC-----TTEEEEEEESSSEEEEEEEE
T ss_pred CCCCCcHHHHHHHHHHHcCCCcc-eEEEEEchHHHHHHhcccC-----CCcEEEEEEeCCcceEEEEc
Confidence 55688999999999999887742 1111122345556666554 33555567899999999987
No 353
>3s4y_A Thiamin pyrophosphokinase 1; structural genomics, structural genomics consortium, transferase; HET: TPP; 1.80A {Homo sapiens} PDB: 1ig3_A* 2f17_A*
Probab=25.69 E-value=1.2e+02 Score=26.61 Aligned_cols=52 Identities=4% Similarity=-0.096 Sum_probs=31.8
Q ss_pred HHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcC-CCCCCcceEEEEecCc
Q 021698 28 DALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSS-DSSETTTRGLVACGTG 79 (309)
Q Consensus 28 ~~l~~~l~~~g~~v~d~g~~~y~~~a~~va~~v~~~-~~~~~~~~gi~~cgtG 79 (309)
..++++++++|.+++-.-.+|+.|+-+++-...... ..+-.++.-++++++|
T Consensus 81 ~~~~~~~~~~~~~i~~~peKD~TD~ekAl~~~~~~~~~~~~~~~~I~ilGa~G 133 (247)
T 3s4y_A 81 PEVREYYATKGCELISTPDQDHTDFTKCLKMLQKKIEEKDLKVDVIVTLGGLA 133 (247)
T ss_dssp HHHHHHHHHTTCEEEECCCTTSCHHHHHHHHHHHHHHHTTCCCSEEEEECCSS
T ss_pred HHHHHHHHhcCCEEEECCCCCcCHHHHHHHHHHHhhhhccCCCCEEEEEecCC
Confidence 357888899998888755567888766555443210 0001345566677776
No 354
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=25.47 E-value=1.4e+02 Score=22.11 Aligned_cols=32 Identities=19% Similarity=0.124 Sum_probs=23.0
Q ss_pred CCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021698 10 PHPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 10 ~~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d 43 (309)
.+++||.|..|+..+ .+.+.+.|+..||+|.-
T Consensus 6 ~~~~~iLivd~~~~~--~~~l~~~L~~~g~~v~~ 37 (147)
T 2zay_A 6 GKWWRIMLVDTQLPA--LAASISALSQEGFDIIQ 37 (147)
T ss_dssp --CEEEEEECTTGGG--GHHHHHHHHHHTEEEEE
T ss_pred CCCceEEEEeCCHHH--HHHHHHHHHHcCCeEEE
Confidence 456799999888543 46677778888998874
No 355
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=25.34 E-value=41 Score=27.93 Aligned_cols=49 Identities=22% Similarity=0.265 Sum_probs=35.0
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhc
Q 021698 13 LKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSS 62 (309)
Q Consensus 13 mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~g~~~y~~~a~~va~~v~~ 62 (309)
||++++.|..-.+--..+.+.|.+ |...+++|..-|...+..+.+.+.+
T Consensus 1 ~~li~a~d~~~~~~~~~~~~~~~~-~v~~iev~~~~~~~~g~~~i~~l~~ 49 (207)
T 3ajx_A 1 MKLQVAIDLLSTEAALELAGKVAE-YVDIIELGTPLIKAEGLSVITAVKK 49 (207)
T ss_dssp CEEEEEECCSCHHHHHHHHHHHGG-GCSEEEECHHHHHHHCTHHHHHHHH
T ss_pred CeEEEEeCCCCHHHHHHHHHHhhc-cCCEEEECcHHHHhhCHHHHHHHHH
Confidence 799999998777665666666766 7888998775444556666666654
No 356
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A*
Probab=25.27 E-value=1.2e+02 Score=29.91 Aligned_cols=45 Identities=13% Similarity=0.131 Sum_probs=34.2
Q ss_pred EEEEEeCc--ccHHHHHHHHHHHHhCCCcEE---EecCCCCcchhHHHHH
Q 021698 14 KIIAGADS--FGAELKDALVSHLRSLNIDVE---DLGTSDYYSIGAEVGR 58 (309)
Q Consensus 14 kI~ig~D~--~g~~lk~~l~~~l~~~g~~v~---d~g~~~y~~~a~~va~ 58 (309)
+|+||.|. .+-.+.+...+-|.+.|.+|. |+|.-.-|-++..+-.
T Consensus 104 ~VvVG~D~R~~S~~~~~~a~~~L~a~Gi~V~~~~d~g~~PTP~vsfav~~ 153 (570)
T 3na5_A 104 PCYVGKDTHALSEPAFISVLEVLAANGVDVIVQENNGFTPTPAVSNAILV 153 (570)
T ss_dssp CEEEEECSSTTHHHHHHHHHHHHHHTTCCEEEEGGGCCCCHHHHHHHHHH
T ss_pred eEEEEeCCCcccHHHHHHHHHHHHHCCCEEEEeCCCCccChHHHHHHHHH
Confidence 69999996 455677777799999999999 5677666666555543
No 357
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=25.12 E-value=62 Score=29.34 Aligned_cols=40 Identities=13% Similarity=-0.036 Sum_probs=25.9
Q ss_pred CCCCCCcEEEEEeCcccHHH--HHHHHHHHHhCCCcEEEecC
Q 021698 7 AAAPHPLKIIAGADSFGAEL--KDALVSHLRSLNIDVEDLGT 46 (309)
Q Consensus 7 ~~~~~~mkI~ig~D~~g~~l--k~~l~~~l~~~g~~v~d~g~ 46 (309)
....+.|||++.+....=.+ --.|.+.|++.||||.=+..
T Consensus 15 ~~~~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~ 56 (398)
T 3oti_A 15 HIEGRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA 56 (398)
T ss_dssp ----CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES
T ss_pred chhhhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc
Confidence 33445699999987533222 24678889999999986655
No 358
>3sqn_A Conserved domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MGA family; 2.31A {Enterococcus faecalis}
Probab=24.93 E-value=28 Score=33.74 Aligned_cols=20 Identities=10% Similarity=-0.029 Sum_probs=16.5
Q ss_pred CCcceEEEEecCchhhhhhh
Q 021698 67 ETTTRGLVACGTGVGVAIFA 86 (309)
Q Consensus 67 ~~~~~gi~~cgtG~G~~i~a 86 (309)
...-++|++|.+|+|+|...
T Consensus 396 ~~~~~~~vVC~~GigtS~lL 415 (485)
T 3sqn_A 396 AQTMTAYFLFQGEPAWKAFL 415 (485)
T ss_dssp CCSEEEEEECCSCHHHHHHH
T ss_pred cccceEEEECCCchhHHHHH
Confidence 45568999999999999753
No 359
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=24.92 E-value=3.8e+02 Score=24.13 Aligned_cols=58 Identities=12% Similarity=0.150 Sum_probs=34.0
Q ss_pred EEEEcCCC---cCCccccCc-cEEEEE--EeC-EEEEE-EEeCCeE--EEecCCcEEEECCCCcEEEE
Q 021698 217 IVRFKAGS---VEPAHHHTF-GHDLVV--LEG-KKSVW-NLTKGER--FDLTVGDYLFTPAGDVHRVK 274 (309)
Q Consensus 217 ~v~l~pG~---~~p~H~H~~-~e~vyV--l~G-~l~v~-~~~~~~~--~~L~pGd~i~iP~g~~H~~~ 274 (309)
+..+.||+ ..|+|.|.. .|..|- +.. ..-++ ....+++ ..+.-||.+.+|++-+|..-
T Consensus 184 ~evltpgg~WSSyPpHkHDrr~EeyyYF~l~~~gfv~q~~g~p~Etrhi~V~n~daVlvP~wh~h~~~ 251 (282)
T 1xru_A 184 LTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVFHMMGQPQETRHIVMHNEQAVISPSWSIHSGV 251 (282)
T ss_dssp EEEECTTCCEESCSEEECTTEEEEEEEESCCTTCCEEEEEEETTEEEEEEECSSEEEEECTTCEEEEE
T ss_pred EEEEeCCCCcCCCCCccCCCCceEEEEEEeCCCCEEEEEeCCCCCeeEEEEECCCEEEeCCCCCCCCC
Confidence 34566764 359999975 333332 222 11222 1234445 56699999999987777743
No 360
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=24.91 E-value=96 Score=24.85 Aligned_cols=49 Identities=12% Similarity=0.043 Sum_probs=32.5
Q ss_pred cEEEEEeCccc--HHHHHHHHHHHHh-CCCcEEEecCCC-CcchhHHHHHHhhc
Q 021698 13 LKIIAGADSFG--AELKDALVSHLRS-LNIDVEDLGTSD-YYSIGAEVGRRVSS 62 (309)
Q Consensus 13 mkI~ig~D~~g--~~lk~~l~~~l~~-~g~~v~d~g~~~-y~~~a~~va~~v~~ 62 (309)
.+|+|.| |.. -.+++.+...+-+ ..+..+|+-.++ ..++..++.+.+.+
T Consensus 4 igiii~s-HG~~A~gl~~~~~~i~G~~~~v~av~~~~~~~~~~~~~~i~~~i~~ 56 (144)
T 3lfh_A 4 KFVLIIT-HGDFGKGLLSGAEVIIGKQENVHTVGLNLGDNIEVVRKEVEKIIKE 56 (144)
T ss_dssp EEEEEEE-ETTHHHHHHHHHHHHHCCCSSEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred ceEEEEe-CcHHHHHHHHHHHHHcCCCCcEEEEEccCCCCHHHHHHHHHHHHHH
Confidence 4566665 444 4777777776644 478888987764 44577777777754
No 361
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=24.58 E-value=2.1e+02 Score=20.96 Aligned_cols=33 Identities=3% Similarity=-0.210 Sum_probs=25.5
Q ss_pred CCcEEEEEeCcccHHHHHHHHHHHHh-CCCcEEEec
Q 021698 11 HPLKIIAGADSFGAELKDALVSHLRS-LNIDVEDLG 45 (309)
Q Consensus 11 ~~mkI~ig~D~~g~~lk~~l~~~l~~-~g~~v~d~g 45 (309)
+++||.|..|+.. ..+.|+..|++ .||+|.-+.
T Consensus 3 ~~~~ilivdd~~~--~~~~l~~~L~~~~~~~v~~~~ 36 (140)
T 3lua_A 3 LDGTVLLIDYFEY--EREKTKIIFDNIGEYDFIEVE 36 (140)
T ss_dssp CCCEEEEECSCHH--HHHHHHHHHHHHCCCEEEEEC
T ss_pred CCCeEEEEeCCHH--HHHHHHHHHHhccCccEEEEC
Confidence 3578999998854 45778888998 999998543
No 362
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=24.38 E-value=84 Score=32.53 Aligned_cols=58 Identities=12% Similarity=0.161 Sum_probs=38.4
Q ss_pred CCcEEEEEe---CcccHHH-HHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCcceEEEEecC
Q 021698 11 HPLKIIAGA---DSFGAEL-KDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSETTTRGLVACGT 78 (309)
Q Consensus 11 ~~mkI~ig~---D~~g~~l-k~~l~~~l~~~g~~v~d~g~~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgt 78 (309)
++.||+++. | +.+. |+.+...|+..||+|+|+|.+.-+ ..+++++.+ ..-..|.+|++
T Consensus 603 ~r~kVvlatvg~D--~HdiG~~iVa~~l~~~GfeVi~lG~~v~~---eeiv~aA~e-----~~adiVglSsl 664 (762)
T 2xij_A 603 RRPRLLVAKMGQD--GHDRGAKVIATGFADLGFDVDIGPLFQTP---REVAQQAVD-----ADVHAVGVSTL 664 (762)
T ss_dssp SCCEEEEECCSSC--CCCHHHHHHHHHHHHTTCEEEECCTTCCH---HHHHHHHHH-----TTCSEEEEEEC
T ss_pred CCCEEEEEecCcc--hhhHHHHHHHHHHHhCCeEEeeCCCCCCH---HHHHHHHHH-----cCCCEEEEeee
Confidence 455888874 5 4444 677778999999999999986433 334444443 12357777865
No 363
>3k94_A Thiamin pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.10A {Geobacillus thermodenitrificans}
Probab=23.93 E-value=1.1e+02 Score=26.36 Aligned_cols=61 Identities=18% Similarity=0.067 Sum_probs=45.0
Q ss_pred EEEEEeCcccHHH-----------------HHHHHHHHHhCCCcEEEecC-CCCcchhHHHHHHhhcCCCCCCcceEEEE
Q 021698 14 KIIAGADSFGAEL-----------------KDALVSHLRSLNIDVEDLGT-SDYYSIGAEVGRRVSSSDSSETTTRGLVA 75 (309)
Q Consensus 14 kI~ig~D~~g~~l-----------------k~~l~~~l~~~g~~v~d~g~-~~y~~~a~~va~~v~~~~~~~~~~~gi~~ 75 (309)
.+.||+|.+...| .++.+++++++|.+++-+-+ +|+.|+-+++-..... .++.-+++
T Consensus 25 ~~~i~~Dgga~~l~~~g~~Pd~ivGD~DSi~~~~~~~~~~~~~~i~~~p~eKD~TD~e~Al~~a~~~-----g~~~I~i~ 99 (223)
T 3k94_A 25 VCWVGVDRGTMTLLEAGFRPVRAFGDFDSLPAEDVVKLQQAFPDLDVWPAEKDKTDMEIALDWAVEQ-----TARCIRLF 99 (223)
T ss_dssp EEEEEETTHHHHHHHHTCCCSEEESCGGGSCHHHHHHHHHHCTTCCEECCBTTBCHHHHHHHHHHTT-----CCSEEEEE
T ss_pred CEEEEECHHHHHHHHcCCCCCEEEeCcccCCHHHHHHHHhcCCeEEECCCcCCCCHHHHHHHHHHHc-----CCCEEEEE
Confidence 6899999987755 45677888888888888864 5788886666555543 45677777
Q ss_pred ecCc
Q 021698 76 CGTG 79 (309)
Q Consensus 76 cgtG 79 (309)
+++|
T Consensus 100 Ga~G 103 (223)
T 3k94_A 100 GATG 103 (223)
T ss_dssp SCSS
T ss_pred cCCC
Confidence 7777
No 364
>3mel_A Thiamin pyrophosphokinase family protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium; HET: TPP; 2.79A {Enterococcus faecalis}
Probab=23.91 E-value=89 Score=26.98 Aligned_cols=62 Identities=10% Similarity=0.020 Sum_probs=43.3
Q ss_pred EEEEEeCcccHHH-----------------HHHHHHHHHhCCCcEEEecCC-CCcchhHHHHHHhhcCCCCCCcceEEEE
Q 021698 14 KIIAGADSFGAEL-----------------KDALVSHLRSLNIDVEDLGTS-DYYSIGAEVGRRVSSSDSSETTTRGLVA 75 (309)
Q Consensus 14 kI~ig~D~~g~~l-----------------k~~l~~~l~~~g~~v~d~g~~-~y~~~a~~va~~v~~~~~~~~~~~gi~~ 75 (309)
.+.||+|.+.-.| ....+++++++|.+++-+-++ |+.|+-+++-.+... +....-+++
T Consensus 24 ~~~I~aDgGa~~l~~~g~~Pd~ivGDfDSi~~~~~~~~~~~~~~~~~~~~eKD~TD~e~Al~~~~~~----~~~~~I~i~ 99 (222)
T 3mel_A 24 DYFVGIDRGCLHLLEADLPLQLAVGDFDSLSREEYHFVQETTETLIQAPAEKDDTDTQLALQEALQR----FPQAEMTII 99 (222)
T ss_dssp SCEEEETTHHHHHHTTTCCCCEEEECCTTSCTTHHHHHHHHCSSEEECCSSCSSCHHHHHHHHHHHH----CTTSEEEEE
T ss_pred CEEEEEcHHHHHHHHCCCCCCEEEeCcccCCHHHHHHHHhcCCcEEECCccCCCCHHHHHHHHHHHh----CCCceEEEE
Confidence 4678888876655 345678888889999887654 788866665555554 443467777
Q ss_pred ecCc
Q 021698 76 CGTG 79 (309)
Q Consensus 76 cgtG 79 (309)
+++|
T Consensus 100 Ga~G 103 (222)
T 3mel_A 100 GATG 103 (222)
T ss_dssp CCCS
T ss_pred ccCC
Confidence 7777
No 365
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=23.89 E-value=3.2e+02 Score=22.86 Aligned_cols=31 Identities=16% Similarity=0.207 Sum_probs=24.5
Q ss_pred CcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEe
Q 021698 12 PLKIIAGADSFGAELKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 12 ~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~ 44 (309)
++||.|.-|+.- +.+.|+..|++.||+|.-.
T Consensus 37 ~~~ILivdd~~~--~~~~l~~~L~~~g~~v~~~ 67 (249)
T 3q9s_A 37 EQRILVIEDDHD--IANVLRMDLTDAGYVVDHA 67 (249)
T ss_dssp CCEEEEECSCHH--HHHHHHHHHHTTTCEEEEE
T ss_pred CCEEEEEECCHH--HHHHHHHHHHHCCCEEEEe
Confidence 468999999854 4678889999999977643
No 366
>3lm8_A Thiamine pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: VIB; 2.60A {Bacillus subtilis}
Probab=23.80 E-value=1.2e+02 Score=26.14 Aligned_cols=61 Identities=10% Similarity=0.034 Sum_probs=45.2
Q ss_pred EEEEEeCcccHHH-----------------HHHHHHHHHhCCCcEEEecC-CCCcchhHHHHHHhhcCCCCCCcceEEEE
Q 021698 14 KIIAGADSFGAEL-----------------KDALVSHLRSLNIDVEDLGT-SDYYSIGAEVGRRVSSSDSSETTTRGLVA 75 (309)
Q Consensus 14 kI~ig~D~~g~~l-----------------k~~l~~~l~~~g~~v~d~g~-~~y~~~a~~va~~v~~~~~~~~~~~gi~~ 75 (309)
.+.||+|.+...| .++.+++++++|.+++-+-+ +|+.|+-+++-.+... .++.-+++
T Consensus 26 ~~~i~~DgGa~~l~~~g~~Pd~ivGDfDSi~~~~~~~~~~~~~~i~~~p~eKD~TD~e~Al~~a~~~-----g~~~I~i~ 100 (222)
T 3lm8_A 26 TLWIGVDKGTVTLLDAGIIPVEAFGDFDSITEQERRRIEKAAPALHVYQAEKDQTDLDLALDWALEK-----QPDIIQIF 100 (222)
T ss_dssp EEEEEETHHHHHHHHHTCCCSEEESCSTTSCHHHHHHHHHHCTTCEEECCCSSSCHHHHHHHHHHHH-----CCSEEEEE
T ss_pred CEEEEECHHHHHHHHcCCCCcEEEeCcccCCHHHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHHc-----CCCEEEEE
Confidence 6899999987755 45677888889999998864 5788876666555544 34677777
Q ss_pred ecCc
Q 021698 76 CGTG 79 (309)
Q Consensus 76 cgtG 79 (309)
+++|
T Consensus 101 Ga~G 104 (222)
T 3lm8_A 101 GITG 104 (222)
T ss_dssp SCCC
T ss_pred cCCC
Confidence 7777
No 367
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=23.52 E-value=2.1e+02 Score=20.51 Aligned_cols=31 Identities=10% Similarity=0.084 Sum_probs=24.5
Q ss_pred CcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEe
Q 021698 12 PLKIIAGADSFGAELKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 12 ~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~ 44 (309)
++||.|..|+.. ..+.|++.|++.||+|.-+
T Consensus 3 ~~~ilivdd~~~--~~~~l~~~L~~~g~~v~~~ 33 (127)
T 3i42_A 3 LQQALIVEDYQA--AAETFKELLEMLGFQADYV 33 (127)
T ss_dssp CEEEEEECSCHH--HHHHHHHHHHHTTEEEEEE
T ss_pred cceEEEEcCCHH--HHHHHHHHHHHcCCCEEEE
Confidence 468999888753 5678899999999988754
No 368
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=23.34 E-value=39 Score=30.90 Aligned_cols=40 Identities=15% Similarity=0.066 Sum_probs=32.2
Q ss_pred EEEEecCchhhhhhhcCCCceEEEEeCCHHHHHHHHhhcC
Q 021698 72 GLVACGTGVGVAIFANKNPGVFATTCLTPADALNTRSINN 111 (309)
Q Consensus 72 gi~~cgtG~G~~i~aNK~~giraa~~~~~~~A~~~r~hNn 111 (309)
.=+.||+|.=..-.+.++|++++.+..-+.....+|++-.
T Consensus 184 ~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~ 223 (353)
T 4a6d_A 184 CDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFS 223 (353)
T ss_dssp EEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSC
T ss_pred EeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhh
Confidence 3456788877778899999999988888888888887643
No 369
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=23.23 E-value=1.3e+02 Score=25.31 Aligned_cols=32 Identities=13% Similarity=0.165 Sum_probs=26.0
Q ss_pred CCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEe
Q 021698 11 HPLKIIAGADSFGAELKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 11 ~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~ 44 (309)
+++||.|.-|+.- +.+.|+..|+..||+|.-+
T Consensus 22 ~~~~ILivdd~~~--~~~~l~~~L~~~g~~v~~~ 53 (250)
T 3r0j_A 22 PEARVLVVDDEAN--IVELLSVSLKFQGFEVYTA 53 (250)
T ss_dssp SSCEEEEECSCHH--HHHHHHHHHHHTTCEEEEE
T ss_pred CCceEEEEECCHH--HHHHHHHHHHHCCCEEEEE
Confidence 4679999999854 4678889999999998743
No 370
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=23.22 E-value=58 Score=28.60 Aligned_cols=37 Identities=19% Similarity=0.245 Sum_probs=27.2
Q ss_pred CCcEEEEEeCc---ccHHHHHHHHHHHHhCCCcEEEecCCC
Q 021698 11 HPLKIIAGADS---FGAELKDALVSHLRSLNIDVEDLGTSD 48 (309)
Q Consensus 11 ~~mkI~ig~D~---~g~~lk~~l~~~l~~~g~~v~d~g~~~ 48 (309)
++-||++++=. --.. |+.+...|+..||+|+|+|.+-
T Consensus 122 ~~~~vlla~~~gd~HdiG-~~iva~~L~~~G~~Vi~LG~~v 161 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIG-KNIVTALLRANGYNVVDLGRDV 161 (258)
T ss_dssp CSCEEEEEECTTCCCCHH-HHHHHHHHHHTTCEEEEEEEEC
T ss_pred CCCeEEEEeCCCCccHHH-HHHHHHHHHHCCCEEEECCCCC
Confidence 34588888633 2233 5778888999999999999863
No 371
>3d8t_A Uroporphyrinogen-III synthase; heme biosynthesis, lyase; 1.60A {Thermus thermophilus} PDB: 3d8r_A 3d8s_A 3d8n_A
Probab=23.06 E-value=3.1e+02 Score=23.80 Aligned_cols=106 Identities=10% Similarity=-0.089 Sum_probs=56.2
Q ss_pred EEEEEe-CcccHHHHHHHHHHHHhCCCcEEEecCCCC-cch--hHHHHHHhhcCCCCCCcceEEEEecCchhhhhhhcCC
Q 021698 14 KIIAGA-DSFGAELKDALVSHLRSLNIDVEDLGTSDY-YSI--GAEVGRRVSSSDSSETTTRGLVACGTGVGVAIFANKN 89 (309)
Q Consensus 14 kI~ig~-D~~g~~lk~~l~~~l~~~g~~v~d~g~~~y-~~~--a~~va~~v~~~~~~~~~~~gi~~cgtG~G~~i~aNK~ 89 (309)
||.+-. +.. .+.|.+.|++.|++|..+=.+.. ++. ...+.+.+.+ +..+ +++-.|..++......+
T Consensus 158 ~vLi~r~~~~----~~~L~~~L~~~G~~v~~~~~Y~~~~~~~~~~~~~~~l~~----~~~d--~v~FtS~~~v~~~~~~~ 227 (286)
T 3d8t_A 158 VAALQLYGKP----LPLLENALAERGYRVLPLMPYRHLPDPEGILRLEEAVLR----GEVD--ALAFVAAIQVEFLFEGA 227 (286)
T ss_dssp EEEEECSSSC----CHHHHHHHHHTTCEEEEECSEEEEECHHHHHHHHHHHHT----TCCS--EEEESSHHHHHHHHHHC
T ss_pred eEEEEccCcc----cHHHHHHHHHCCCEEEEEEEEEEecCcccHHHHHHHHHc----CCCC--EEEEECHHHHHHHHHHH
Confidence 666654 433 35688889999999999887532 222 2344555655 5555 44445555554433322
Q ss_pred ----------C-ceEEEEeCCHHHHHHHHhhcCcceeeecccccCHHHHHHHH
Q 021698 90 ----------P-GVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEIL 131 (309)
Q Consensus 90 ----------~-giraa~~~~~~~A~~~r~hNnaNvl~~g~~~~~~~~a~~i~ 131 (309)
. +++ ..|-.+.+|+.++++. -++.....+.....+...|.
T Consensus 228 ~~~~~~~~~l~~~~~-i~aIG~~TA~al~~~G-~~~~~~a~~~~~~~L~~~l~ 278 (286)
T 3d8t_A 228 KDPKALREALNTRVK-ALAVGRVTADALREWG-VKPFYVDETERLGSLLQGFK 278 (286)
T ss_dssp SCHHHHHHHHTTTSE-EEEESHHHHHHHHHTT-CCCSEEECSSCHHHHHHHHH
T ss_pred HhccchhhHhhcCCE-EEEECHHHHHHHHHcC-CCceEEeCCCCHHHHHHHHH
Confidence 2 333 4455556666666542 33333444444444444443
No 372
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=23.00 E-value=1.2e+02 Score=21.69 Aligned_cols=30 Identities=10% Similarity=0.140 Sum_probs=23.8
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEEe
Q 021698 13 LKIIAGADSFGAELKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 13 mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~ 44 (309)
+||.|..|+. ...+.++..|+..||+|.-.
T Consensus 3 ~~ilivdd~~--~~~~~l~~~l~~~g~~v~~~ 32 (127)
T 2jba_A 3 RRILVVEDEA--PIREMVCFVLEQNGFQPVEA 32 (127)
T ss_dssp CEEEEECSCH--HHHHHHHHHHHHTTCEEEEE
T ss_pred cEEEEEcCCH--HHHHHHHHHHHHCCceEEEe
Confidence 5899998886 45678888899999998743
No 373
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=22.68 E-value=74 Score=23.45 Aligned_cols=52 Identities=10% Similarity=0.011 Sum_probs=25.0
Q ss_pred HHHHHHH--hCCCcEEEecCC--------------CCcchhHHHHHHhhcCCCCCCcceEEEEecCchhhhhhh
Q 021698 29 ALVSHLR--SLNIDVEDLGTS--------------DYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVGVAIFA 86 (309)
Q Consensus 29 ~l~~~l~--~~g~~v~d~g~~--------------~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G~~i~a 86 (309)
+|++.|+ +.++-|+|+=+. .+.++.......+. ....-|+.|.+|.-...++
T Consensus 2 el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~~~~~l~------~~~~ivvyc~~g~rs~~a~ 69 (106)
T 3hix_A 2 VLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDRASSSLE------KSRDIYVYGAGDEQTSQAV 69 (106)
T ss_dssp -----------CCEEEECSCHHHHHTCEETTCEECCGGGHHHHHHHHSC------TTSCEEEECSSHHHHHHHH
T ss_pred hHHHHHHcCCCCeEEEECCCHHHHhcCcCCCCEeCCHHHHHHHHHhcCC------CCCeEEEEECCCChHHHHH
Confidence 4556665 446889998542 13334333333332 3356899999986544443
No 374
>2gax_A Hypothetical protein ATU0240; MCSG, structural genomics, agrobacterium tumfaciens, hypothe protein, PSI; 1.80A {Agrobacterium tumefaciens str} SCOP: c.131.1.1
Probab=22.55 E-value=96 Score=24.76 Aligned_cols=58 Identities=9% Similarity=0.039 Sum_probs=36.8
Q ss_pred EEEEEeCcccHHHHHHHHHHHHhCCCcEEEec-----CCCCcchhHHHHHHhhcCCCCCCcceEEEEecC
Q 021698 14 KIIAGADSFGAELKDALVSHLRSLNIDVEDLG-----TSDYYSIGAEVGRRVSSSDSSETTTRGLVACGT 78 (309)
Q Consensus 14 kI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~g-----~~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgt 78 (309)
+|++.+|. -.|++ |.+...+.|..+.||- +.+|.++..++++.=.. .-.-.||.+||-
T Consensus 58 ~~VL~a~~--~~L~~-l~~~a~~~~l~~~~f~d~~~~~~~~~~~~~~~~~~~~~----~l~~~GI~l~Gp 120 (135)
T 2gax_A 58 IVVMATDQ--EALRK-IHQRSLERDITTSLYIEEMFATGHDAANRQVFSHFSPD----TAKVVGMALRAD 120 (135)
T ss_dssp EEEEEECH--HHHHH-HHHHHHHTTCCCEEEEGGGGGCCCHHHHHHHHTTCCTT----TCCEEEEEEEEE
T ss_pred EEEEEECH--HHHHH-HHHHHHHCCCcEEeccHHhhhCCCHHHHHHHHhcCCcc----cceEEEEEEECC
Confidence 68888887 55644 4555556788888874 34688886666554222 233368887763
No 375
>1req_B Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 1e1c_B* 2req_B* 3req_B* 4req_B* 5req_B* 6req_B* 7req_B*
Probab=22.41 E-value=59 Score=32.96 Aligned_cols=60 Identities=10% Similarity=0.039 Sum_probs=37.3
Q ss_pred CCcEEEEEe--CcccHHH-HHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCcceEEEEecCc
Q 021698 11 HPLKIIAGA--DSFGAEL-KDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSETTTRGLVACGTG 79 (309)
Q Consensus 11 ~~mkI~ig~--D~~g~~l-k~~l~~~l~~~g~~v~d~g~~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG 79 (309)
++.||+|+. ..++.+. |+.+...|+..|+||+|.|.+ .+ ..+++++.+ .. -.-|.+|++=
T Consensus 508 ~~~kvvLatLg~Da~Hd~ga~~va~~l~~aGfeVi~~g~~--~t--ee~v~aa~e----~~-adiv~lSsl~ 570 (637)
T 1req_B 508 ERPKVFLACLGTRRDFGGREGFSSPVWHIAGIDTPQVEGG--TT--AEIVEAFKK----SG-AQVADLCSSA 570 (637)
T ss_dssp SCCBCEEEECSCHHHHHHHHHHHHHHHHHTTCBCCEEECC--CH--HHHHHHHHH----HT-CSEEEEECCH
T ss_pred chhhhhHhhhCCchhhhhhHHHHHHHHHhCCeeEEeCCCC--CC--HHHHHHHHh----cC-CCEEEEeccc
Confidence 334666663 2224444 666677899999999999763 22 556666554 12 3467777764
No 376
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=22.04 E-value=78 Score=32.57 Aligned_cols=58 Identities=14% Similarity=0.153 Sum_probs=38.4
Q ss_pred CCcEEEEEe---CcccHHH-HHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCcceEEEEecC
Q 021698 11 HPLKIIAGA---DSFGAEL-KDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSETTTRGLVACGT 78 (309)
Q Consensus 11 ~~mkI~ig~---D~~g~~l-k~~l~~~l~~~g~~v~d~g~~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgt 78 (309)
++.||++++ | +.++ |+.+...|+..||+|+|+|.+.-+ ..+++.+.+ . .-..|.+|++
T Consensus 595 ~r~kVvlatvg~D--~HdiG~~iVa~~l~~~GfeVi~lG~~v~~---eeiv~aA~e----~-~adiVglSsl 656 (727)
T 1req_A 595 RRPRILLAKMGQD--GHDRGQKVIATAYADLGFDVDVGPLFQTP---EETARQAVE----A-DVHVVGVSSL 656 (727)
T ss_dssp SCCEEEEECBTTC--CCCHHHHHHHHHHHHHTCEEEECCTTBCH---HHHHHHHHH----T-TCSEEEEEEC
T ss_pred CCCEEEEEeCCcc--hhHHHHHHHHHHHHhCCeEEEeCCCCCCH---HHHHHHHHH----c-CCCEEEEeee
Confidence 455888874 5 4444 677778899999999999986433 334444443 1 2357777875
No 377
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=22.00 E-value=3.3e+02 Score=23.54 Aligned_cols=53 Identities=15% Similarity=0.017 Sum_probs=31.8
Q ss_pred CCCcEEEEEeCcc---cH--HHHHHHHHHHHhCCCcEE--EecCCC-------CcchhHHHHHHhhc
Q 021698 10 PHPLKIIAGADSF---GA--ELKDALVSHLRSLNIDVE--DLGTSD-------YYSIGAEVGRRVSS 62 (309)
Q Consensus 10 ~~~mkI~ig~D~~---g~--~lk~~l~~~l~~~g~~v~--d~g~~~-------y~~~a~~va~~v~~ 62 (309)
..+|||++-+-+. |. .|-+.+.+.|++.|++|+ |+.... .++-..++.++|.+
T Consensus 32 ~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL~~~pl~~~d~~~~d~~~~l~~~i~~ 98 (247)
T 2q62_A 32 THRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDPSGLPLPDAAPVSHPKVQELRELSIW 98 (247)
T ss_dssp CSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCCTTCCCTTSSCTTSHHHHHHHHHHHH
T ss_pred CCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEhhcCCCCcCCCCCCHHHHHHHHHHHH
Confidence 4557876665442 44 677888888998887665 444322 12224556666665
No 378
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=21.60 E-value=1.4e+02 Score=21.68 Aligned_cols=30 Identities=20% Similarity=0.214 Sum_probs=23.9
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEEe
Q 021698 13 LKIIAGADSFGAELKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 13 mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~ 44 (309)
+||.|.-|+. ...+.++..|++.||+|.-.
T Consensus 3 ~~ILivdd~~--~~~~~l~~~l~~~g~~v~~~ 32 (122)
T 3gl9_A 3 KKVLLVDDSA--VLRKIVSFNLKKEGYEVIEA 32 (122)
T ss_dssp CEEEEECSCH--HHHHHHHHHHHHTTCEEEEE
T ss_pred ceEEEEeCCH--HHHHHHHHHHHHCCcEEEEe
Confidence 4798888885 35578889999999999843
No 379
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=21.57 E-value=2.2e+02 Score=24.92 Aligned_cols=63 Identities=11% Similarity=0.133 Sum_probs=39.1
Q ss_pred CcEEEEE---eCcccHHHHHHHHHHHHhCCCcEEEecC-CCCcchhHHHHHHhhcCCCCCCcceEEEEecCch
Q 021698 12 PLKIIAG---ADSFGAELKDALVSHLRSLNIDVEDLGT-SDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGV 80 (309)
Q Consensus 12 ~mkI~ig---~D~~g~~lk~~l~~~l~~~g~~v~d~g~-~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~ 80 (309)
..||++- .|..|..+.+.+++.|++.|.+|...-- .+..++...+.+.... . ..+|++++++.
T Consensus 149 ~~~iaii~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~d~~~~~~~l~~~-----~-~d~v~~~~~~~ 215 (366)
T 3td9_A 149 AKRVVVFTDVEQDYSVGLSNFFINKFTELGGQVKRVFFRSGDQDFSAQLSVAMSF-----N-PDAIYITGYYP 215 (366)
T ss_dssp CCEEEEEEETTCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCCCHHHHHHHHHT-----C-CSEEEECSCHH
T ss_pred CcEEEEEEeCCCcHHHHHHHHHHHHHHHCCCEEEEEEeCCCCccHHHHHHHHHhc-----C-CCEEEEccchh
Confidence 3477776 4566778889999999999999875421 1233444444333333 2 35777767764
No 380
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=21.53 E-value=1.3e+02 Score=21.26 Aligned_cols=29 Identities=17% Similarity=0.358 Sum_probs=22.9
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021698 13 LKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 13 mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d 43 (309)
|||.|..|+. ...+.+.+.|+..||+|.-
T Consensus 1 ~~ilivdd~~--~~~~~l~~~l~~~g~~v~~ 29 (121)
T 2pl1_A 1 MRVLVVEDNA--LLRHHLKVQIQDAGHQVDD 29 (121)
T ss_dssp CEEEEECSCH--HHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEEeCcH--HHHHHHHHHHhhcCCEEEE
Confidence 5888888875 4567888889999998864
No 381
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=21.42 E-value=1.5e+02 Score=21.52 Aligned_cols=32 Identities=19% Similarity=0.175 Sum_probs=24.0
Q ss_pred CCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEe
Q 021698 11 HPLKIIAGADSFGAELKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 11 ~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~ 44 (309)
+++||.|..|+.. ..+.+++.|++.||+|.-+
T Consensus 5 ~~~~ilivdd~~~--~~~~l~~~L~~~g~~v~~~ 36 (132)
T 3lte_A 5 QSKRILVVDDDQA--MAAAIERVLKRDHWQVEIA 36 (132)
T ss_dssp --CEEEEECSCHH--HHHHHHHHHHHTTCEEEEE
T ss_pred CCccEEEEECCHH--HHHHHHHHHHHCCcEEEEe
Confidence 4578999988754 4577888899999998753
No 382
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=21.37 E-value=28 Score=33.71 Aligned_cols=105 Identities=11% Similarity=0.077 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCcceEEEEecCchhhhhhhc-----CC--------Cc
Q 021698 25 ELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSETTTRGLVACGTGVGVAIFAN-----KN--------PG 91 (309)
Q Consensus 25 ~lk~~l~~~l~~~g~~v~d~g~~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG~G~~i~aN-----K~--------~g 91 (309)
++++.|.+.|+++|..|.-+-. .-.-.+..+++... +....--++.|||+|.++..| |+ .|
T Consensus 164 ~v~~~L~~~l~r~glpv~vval-~NDa~~tll~e~~~-----~~~~~iglilGTGvgg~~i~~~~~i~kl~~~~~~~~~g 237 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVAD-IXDSHGILXXVNYT-----DAXIKMGIIFGSGVNAAYWCDSTXIGDAADGGXXGGAG 237 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEE-ECHHHHHHHHHHHH-----CTTEEEEEEESSSEEEEEEECGGGSSCTTSCSSSCSSC
T ss_pred HHHHHHHHhHhhcCCcceeEEE-Eecchhhccchhhc-----CCccEEEEEECcEEEEEEEECCCcccccccccccccCC
Confidence 8999999999877766221111 12335566666664 455666778899999999999 66 23
Q ss_pred eEEEEe-------------CCHHHHHHHHhhcCcceeee----cccccCHHHHHHHHHHHhcC
Q 021698 92 VFATTC-------------LTPADALNTRSINNCNVLAV----SGMSTSKESAVEILDTWLKT 137 (309)
Q Consensus 92 iraa~~-------------~~~~~A~~~r~hNnaNvl~~----g~~~~~~~~a~~i~~~~l~~ 137 (309)
-.+.-+ .++++-.+=+...|+. =|+ +++++| ++++.++..+...
T Consensus 238 ~~~in~EwG~f~~~~~~lp~t~~D~~lD~~s~~pG-q~fEkm~SG~yLG-el~R~il~~~~~~ 298 (457)
T 2yhx_A 238 XMXICCDQSSFRKAFPSLPQIXYLXTLNXXSPXAX-KTFXKNSXAKNXG-QSLRDVLMXFKXX 298 (457)
T ss_dssp CEEEECCCTTTTTTCSSSCCCHHHHHHHHHSSCSC-CHHHHHHCGGGHH-HHHHHHHHHHHHT
T ss_pred ceEEEEEcccCCCCCCcCCccccccccccccCchH-HHHHHHhhhcCcH-HHHHHHHHHHhcc
Confidence 333333 3556666655665655 354 566666 4555566554433
No 383
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=21.36 E-value=1.6e+02 Score=20.37 Aligned_cols=31 Identities=16% Similarity=0.007 Sum_probs=24.0
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEEec
Q 021698 13 LKIIAGADSFGAELKDALVSHLRSLNIDVEDLG 45 (309)
Q Consensus 13 mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~g 45 (309)
++|.|..|+. ...+.+.+.|+..||+|.-+.
T Consensus 2 ~~iliv~~~~--~~~~~l~~~l~~~g~~v~~~~ 32 (119)
T 2j48_A 2 GHILLLEEED--EAATVVCEMLTAAGFKVIWLV 32 (119)
T ss_dssp CEEEEECCCH--HHHHHHHHHHHHTTCEEEEES
T ss_pred CEEEEEeCCH--HHHHHHHHHHHhCCcEEEEec
Confidence 5788888874 456788899999999987533
No 384
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=21.21 E-value=92 Score=22.77 Aligned_cols=30 Identities=20% Similarity=0.061 Sum_probs=24.3
Q ss_pred CcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021698 12 PLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 12 ~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d 43 (309)
+|||.|..|+.. ..+.+++.|++.||+|+.
T Consensus 1 ~~~ilivdd~~~--~~~~l~~~L~~~g~~v~~ 30 (134)
T 3f6c_A 1 SLNAIIIDDHPL--AIAAIRNLLIKNDIEILA 30 (134)
T ss_dssp CEEEEEECCCHH--HHHHHHHHHHHTTEEEEE
T ss_pred CeEEEEEcCCHH--HHHHHHHHHhhCCcEEEE
Confidence 478999998854 467889999999999873
No 385
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=21.17 E-value=61 Score=31.26 Aligned_cols=45 Identities=27% Similarity=0.256 Sum_probs=33.1
Q ss_pred CCceE--EEEeCCHHHHHHHHhhc-------------------CcceeeecccccCHHHHHHHHHH
Q 021698 89 NPGVF--ATTCLTPADALNTRSIN-------------------NCNVLAVSGMSTSKESAVEILDT 133 (309)
Q Consensus 89 ~~gir--aa~~~~~~~A~~~r~hN-------------------naNvl~~g~~~~~~~~a~~i~~~ 133 (309)
+||+. |-...+..+|...|++- --+++.+|+..+|.|.|.++.+.
T Consensus 174 ipG~~e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~ 239 (502)
T 4g6h_A 174 IPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDY 239 (502)
T ss_dssp CTTHHHHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHH
T ss_pred ccCcccccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHH
Confidence 56753 44567888887776542 13699999999999999888764
No 386
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=21.13 E-value=1.5e+02 Score=21.83 Aligned_cols=33 Identities=18% Similarity=0.222 Sum_probs=24.7
Q ss_pred CCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEe
Q 021698 10 PHPLKIIAGADSFGAELKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 10 ~~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~ 44 (309)
.+.+||.|.-|+.. ..+.+...|+..||+|.-+
T Consensus 13 ~~~~~ilivdd~~~--~~~~l~~~L~~~g~~v~~~ 45 (138)
T 2b4a_A 13 MQPFRVTLVEDEPS--HATLIQYHLNQLGAEVTVH 45 (138)
T ss_dssp -CCCEEEEECSCHH--HHHHHHHHHHHTTCEEEEE
T ss_pred CCCCeEEEECCCHH--HHHHHHHHHHHcCCEEEEe
Confidence 45578999888853 4578888899999988643
No 387
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=21.11 E-value=2.4e+02 Score=24.00 Aligned_cols=65 Identities=8% Similarity=0.021 Sum_probs=40.6
Q ss_pred CCCcEEEEEe---------CcccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCcceEEEEecCc
Q 021698 10 PHPLKIIAGA---------DSFGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSETTTRGLVACGTG 79 (309)
Q Consensus 10 ~~~mkI~ig~---------D~~g~~lk~~l~~~l~~~g~~v~d~g~~~y~~~a~~va~~v~~~~~~~~~~~gi~~cgtG 79 (309)
.+..+|++-. +..-..+.+.+.+.+++.||+++=+-+.+-.+--..+.+.+.+ .. --||+++++.
T Consensus 5 ~~s~~Igvi~~~~~~~~~~~~f~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~----~~-vdGiI~~~~~ 78 (295)
T 3hcw_A 5 NQTYKIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGYGTQTTVSNNMNDLMDEVYKMIKQ----RM-VDAFILLYSK 78 (295)
T ss_dssp CCSCEEEEECSCCCHHHHSCHHHHHHHHHHHHHHHTTTCEEEECCCCSHHHHHHHHHHHHHT----TC-CSEEEESCCC
T ss_pred CCCcEEEEEeecCCcccccChHHHHHHHHHHHHHHHCCCEEEEEcCCCChHHHHHHHHHHHh----CC-cCEEEEcCcc
Confidence 4445677664 3334478899999999999999865443222223344555554 33 4588888764
No 388
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=21.11 E-value=1.2e+02 Score=22.43 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=24.9
Q ss_pred CCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEec
Q 021698 11 HPLKIIAGADSFGAELKDALVSHLRSLNIDVEDLG 45 (309)
Q Consensus 11 ~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~g 45 (309)
+++||.|..|+. ...+.|++.|++.||+|.-+.
T Consensus 5 ~~~~ilivdd~~--~~~~~l~~~L~~~g~~v~~~~ 37 (136)
T 3kto_A 5 HHPIIYLVDHQK--DARAALSKLLSPLDVTIQCFA 37 (136)
T ss_dssp --CEEEEECSCH--HHHHHHHHHHTTSSSEEEEES
T ss_pred CCCeEEEEcCCH--HHHHHHHHHHHHCCcEEEEeC
Confidence 356899999985 446788899999999988544
No 389
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=20.84 E-value=1e+02 Score=22.94 Aligned_cols=41 Identities=24% Similarity=0.349 Sum_probs=31.2
Q ss_pred EEEEEeCcccHHHHHHHHHHHHhCCCcEEEe-cCCCCcchhHHHHHHhh
Q 021698 14 KIIAGADSFGAELKDALVSHLRSLNIDVEDL-GTSDYYSIGAEVGRRVS 61 (309)
Q Consensus 14 kI~ig~D~~g~~lk~~l~~~l~~~g~~v~d~-g~~~y~~~a~~va~~v~ 61 (309)
=|++++| +..+++..|..+-+..+..+..+ ++ ..++++++-
T Consensus 35 lViiA~D-~~~~~~~~l~~~c~~~~vp~~~~~~s------~~eLG~a~G 76 (101)
T 1w41_A 35 LIIVARN-ARPDIKEDIEYYARLSGIPVYEFEGT------SVELGTLLG 76 (101)
T ss_dssp EEEEETT-SCHHHHHHHHHHHHHHTCCEEEESSC------HHHHHHHTT
T ss_pred EEEEeCC-CCHHHHHHHHHHHHhcCCCEEEecCC------HHHHHHHhC
Confidence 4788888 78999999999999988887764 43 355666654
No 390
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=20.75 E-value=2.5e+02 Score=24.35 Aligned_cols=53 Identities=17% Similarity=0.016 Sum_probs=34.2
Q ss_pred CCCcEEEEEeC-cccHHHHHHHHHHHHhCCCcE-EEecCC-CCcchhHHHHHHhhc
Q 021698 10 PHPLKIIAGAD-SFGAELKDALVSHLRSLNIDV-EDLGTS-DYYSIGAEVGRRVSS 62 (309)
Q Consensus 10 ~~~mkI~ig~D-~~g~~lk~~l~~~l~~~g~~v-~d~g~~-~y~~~a~~va~~v~~ 62 (309)
..+.||++-|| |..+..-+++.+.++..+.+. +-.|-- +|-+...++.+.+.+
T Consensus 9 ~~~~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~~~~~~~l~~ 64 (270)
T 3qfm_A 9 MDMTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMPGTGRRRILDLLDQ 64 (270)
T ss_dssp --CEEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSSSSCSHHHHHHHHT
T ss_pred ccccEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHc
Confidence 34569999999 555666667778887777664 445643 344445677777765
No 391
>3qay_A Endolysin; amidase A/B fold, lyase; 2.00A {Clostridium phage PHICD27}
Probab=20.26 E-value=2.3e+02 Score=23.25 Aligned_cols=39 Identities=18% Similarity=0.192 Sum_probs=26.1
Q ss_pred CcEEEEEeCcc-----------c--------HHHHHHHHHHHHhCCCcE-EEecCC-CCc
Q 021698 12 PLKIIAGADSF-----------G--------AELKDALVSHLRSLNIDV-EDLGTS-DYY 50 (309)
Q Consensus 12 ~mkI~ig~D~~-----------g--------~~lk~~l~~~l~~~g~~v-~d~g~~-~y~ 50 (309)
.|||+|=.-|. | ..+-..|++.|++.|++| +-+..+ +|.
T Consensus 1 ~m~IviDpGHGG~D~G~~~ga~g~~~Ekdi~l~ia~~l~~~L~~~G~~V~v~ltR~d~~~ 60 (180)
T 3qay_A 1 HMKICITVGHSILKSGACTSADGVVNEYQYNKSLAPVLADTFRKEGHKVDVIICPEKQFK 60 (180)
T ss_dssp CCEEEEEECCCBCTTSCBCSCBSSSBHHHHHHHHHHHHHHHHHHTTCEEEEECCCSSCCS
T ss_pred CeEEEEECCCCCCCCCCcCCCCCCccHHHHHHHHHHHHHHHHHhcCCcceEEECCCCCcc
Confidence 47888866666 2 145567899999999996 444333 344
No 392
>3k2a_A Homeobox protein MEIS2; homeobox domain, DNA-binding, transcription, nucleus, phosphoprotein, DNA bindi protein; 1.95A {Homo sapiens} SCOP: a.4.1.1
Probab=20.24 E-value=21 Score=24.83 Aligned_cols=38 Identities=21% Similarity=0.384 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCchhhHHHHhHhhhhccc
Q 021698 125 ESAVEILDTWLKTPFKAPCPASGLKPWDEKLSCFFDKSMTE 165 (309)
Q Consensus 125 ~~a~~i~~~~l~~~f~~~~~~~~~~~~l~~I~~~l~~s~~e 165 (309)
..+..+++.||......|||..... .+++.-++.+...
T Consensus 7 ~~~~~~L~~~f~~h~~~pyp~~~~r---~~La~~~~l~~~q 44 (67)
T 3k2a_A 7 KVATNIMRAWLFQHLTHPYPSEEQK---KQLAQDTGLTILQ 44 (67)
T ss_dssp HHHHHHHHHHHHHTTTSCCCCHHHH---HHHHHHHTCCHHH
T ss_pred HHHHHHHHHHHHHhccCCCCCHHHH---HHHHHHhCcCHHH
Confidence 4567899999987777877765433 6777777766543
No 393
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=20.15 E-value=93 Score=27.37 Aligned_cols=35 Identities=26% Similarity=0.256 Sum_probs=25.3
Q ss_pred CcEEEEEeCcccHHHH--HHHHHHHHhCCCcEEEecC
Q 021698 12 PLKIIAGADSFGAELK--DALVSHLRSLNIDVEDLGT 46 (309)
Q Consensus 12 ~mkI~ig~D~~g~~lk--~~l~~~l~~~g~~v~d~g~ 46 (309)
+|||.+-+...|=... ..|.+.|.+.||+|.=++.
T Consensus 6 ~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~ 42 (364)
T 1f0k_A 6 GKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGT 42 (364)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEec
Confidence 4899988765543333 4788999999999986654
No 394
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=20.01 E-value=2.6e+02 Score=20.32 Aligned_cols=33 Identities=6% Similarity=0.032 Sum_probs=25.8
Q ss_pred CCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021698 9 APHPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 9 ~~~~mkI~ig~D~~g~~lk~~l~~~l~~~g~~v~d 43 (309)
..+.+||.|..|+. ...+.|++.|+..||+|.-
T Consensus 15 ~~~~~~ilivdd~~--~~~~~l~~~L~~~g~~v~~ 47 (137)
T 2pln_A 15 PRGSMRVLLIEKNS--VLGGEIEKGLNVKGFMADV 47 (137)
T ss_dssp CTTCSEEEEECSCH--HHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCeEEEEeCCH--HHHHHHHHHHHHcCcEEEE
Confidence 34567999998875 4557888899999999874
Done!