BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021700
(309 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P59277|SYP81_ARATH Syntaxin-81 OS=Arabidopsis thaliana GN=SYP81 PE=2 SV=2
Length = 310
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/315 (73%), Positives = 264/315 (83%), Gaps = 11/315 (3%)
Query: 1 MARIRDRTEDFKDVARHTAVSLGYDESKLAAIMASFIIHKPRERSSFTKAALKTLESIGA 60
M+R RDRTEDFKD R++AVS+GY+ESK+A+ MASFIIHKP+ERS FTKAA KTL+SI
Sbjct: 1 MSRFRDRTEDFKDSVRNSAVSIGYNESKVASTMASFIIHKPKERSPFTKAAFKTLDSIKE 60
Query: 61 LEQFILNHRKDYVEMQRTTEQERDSIEHEVTAFIKTCKEQIDILQNSINDDEANSKGWLG 120
LE F+L HRKDYV++ RTTEQE+DSIE EV AFIK CKEQIDIL NSI ++EANSKGWLG
Sbjct: 61 LELFMLKHRKDYVDLHRTTEQEKDSIEQEVAAFIKACKEQIDILINSIRNEEANSKGWLG 120
Query: 121 RKGDNSNADTIAHKHGVVLILSEKLHSVTAQFDQMRAIRFQDAINRAMPRRKLKRETVSK 180
DN NAD+IAHKHGVVLILSEKLHSVTAQFDQ+RA RFQD INRAMPRRK KR V K
Sbjct: 121 LPADNFNADSIAHKHGVVLILSEKLHSVTAQFDQLRATRFQDIINRAMPRRKPKR--VIK 178
Query: 181 SADISTPNKSDIRELDEIQPEPL------TVQQQLLDDETRALQVELTSLLDAVQQTETK 234
A TP + + + I+P+ + QQQLLDDET+ALQVEL++LLD +QTETK
Sbjct: 179 EA---TPINTTLGNSESIEPDEIQAQPRRLQQQQLLDDETQALQVELSNLLDGARQTETK 235
Query: 235 MVEVSALNHLMSTHILHQAQQIEHLYEQAVEATKNVELGNKELSQAIRRNTSSRTFLLLF 294
MVE+SALNHLM+TH+L QAQQIE LY+QAVEATKNVELGNKELSQAI+RN+SSRTFLLLF
Sbjct: 236 MVEMSALNHLMATHVLQQAQQIEFLYDQAVEATKNVELGNKELSQAIQRNSSSRTFLLLF 295
Query: 295 LFVLTFSILFLDWYS 309
FVLTFS+LFLDWYS
Sbjct: 296 FFVLTFSVLFLDWYS 310
>sp|Q4VBI7|STX18_DANRE Syntaxin-18 OS=Danio rerio GN=stx18 PE=2 SV=1
Length = 314
Score = 142 bits (357), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 154/293 (52%), Gaps = 45/293 (15%)
Query: 40 KPRERSSFTKAALKTLESIGALEQFILNHRKDYV--------EMQRTTEQERDSIEHEVT 91
+PR+R SF+ A + + +I L+ F+L HRKDYV E+ R T+ ERD I+ +
Sbjct: 41 RPRQRDSFSCKAREVISNISKLKDFLLQHRKDYVNAGSVMSSEVSRMTDSERDQIDQDAQ 100
Query: 92 AFIKTCKEQIDILQNSINDDEANSKGWLGRKGDNSNADTIAHKHGVVLILSEKLHSVTAQ 151
F++TC E I L++ ++ + + + H+ V+ ++ L V
Sbjct: 101 IFMRTCAEAISQLRSEMDKKQVSMQ-------------VKDHRAAVLDLIDSYLKGVCKL 147
Query: 152 FDQMRAIRFQDAINRAMPRRKLKR------ETVSKSADISTPNKS----------DIREL 195
+ + RA+R + R + +++L R T + +D +K + R
Sbjct: 148 YSEQRAVR----VKRVVDKKRLSRLEPEQINTEKRQSDGEENDKPVSDGNVDLWEENRVE 203
Query: 196 DEIQPEPLTVQQQLLDDETRALQVELTSLLDAVQQTETKMVEVSALNHLMSTHILHQAQQ 255
D++ PE + Q+ + E + L E+ SLLD V+Q E K+VE+S L + S +L Q +
Sbjct: 204 DDLSPEEI----QMFEQENQRLVGEMNSLLDEVRQIEGKVVEISRLQEIFSEKVLQQETE 259
Query: 256 IEHLYEQAVEATKNVELGNKELSQAIRRNTSSRTFLLLFLFVLTFSILFLDWY 308
I+ +++ V AT+NV+ GN+++ +AI+ N R ++L FL + +FS+LFLDWY
Sbjct: 260 IDSIHQLVVGATENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWY 312
>sp|Q9P2W9|STX18_HUMAN Syntaxin-18 OS=Homo sapiens GN=STX18 PE=1 SV=1
Length = 335
Score = 128 bits (322), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 147/308 (47%), Gaps = 57/308 (18%)
Query: 41 PRERSSFTKAALKTLESIGALEQFILNHRKDYV--------EMQRTTEQERDSIEHEVTA 92
PR + F+ A + + IG L F+L HRKDY+ E R T+ ERD I+ +
Sbjct: 43 PRPKGDFSSRAREVISHIGKLRDFLLEHRKDYINAYSHTMSEYGRMTDTERDQIDQDAQI 102
Query: 93 FIKTCKEQIDILQNSINDDEANSKGWLGRKGDNSNADTIAHKHGVVLILSEKLHSVTAQF 152
F++TC E I L+ + E +S+ H+ V+ + + L V +
Sbjct: 103 FMRTCSEAIQQLRTEAHK-EIHSQ------------QVKEHRTAVLDFIEDYLKRVCKLY 149
Query: 153 DQMRAIRFQDAINRAM-----PRRKLK-RETVSKSADISTPNK----------------- 189
+ RAIR + +++ P K RE+ S +P+K
Sbjct: 150 SEQRAIRVKRVVDKKRLSKLEPEPNTKTRESTSSEKVSQSPSKDSEENPATEERPEKILA 209
Query: 190 ---------SDIRELDEIQPEPLTVQQQLLDDETRALQVELTSLLDAVQQTETKMVEVSA 240
D + DE+ PE + Q+ + E + L E+ SL D V+Q E ++VE+S
Sbjct: 210 ETQPELGTWGDGKGEDELSPEEI----QMFEQENQRLIGEMNSLFDEVRQIEGRVVEISR 265
Query: 241 LNHLMSTHILHQAQQIEHLYEQAVEATKNVELGNKELSQAIRRNTSSRTFLLLFLFVLTF 300
L + + +L Q +I+ +++ V AT+N++ GN+++ +AI+ N R ++L FL + +F
Sbjct: 266 LQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNEDIREAIKNNAGFRVWILFFLVMCSF 325
Query: 301 SILFLDWY 308
S+LFLDWY
Sbjct: 326 SLLFLDWY 333
>sp|Q68FW4|STX18_RAT Syntaxin-18 OS=Rattus norvegicus GN=Stx18 PE=2 SV=1
Length = 334
Score = 128 bits (322), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 151/303 (49%), Gaps = 48/303 (15%)
Query: 41 PRERSSFTKAALKTLESIGALEQFILNHRKDYV--------EMQRTTEQERDSIEHEVTA 92
PR + F+ A + + IG L F+L HRK+Y+ E R T+ ERD I+ +
Sbjct: 43 PRPKGDFSSRAREVISHIGKLRDFLLEHRKEYINAYSHTMSEYGRMTDTERDQIDQDAQI 102
Query: 93 FIKTCKEQIDILQNSINDDEANSKGWLGRKGDNSNADTIAHKHGVVLILSEKLHSVTAQF 152
F++TCK+ I L+ + E +S+ H+ V+ + + L V +
Sbjct: 103 FMRTCKDAIQQLRTEAHK-EIHSQ------------QVKEHRTAVLDFVEDYLKRVCKLY 149
Query: 153 DQMRAIRFQDAINR-------AMPRRKLKRETVSKSADIST------PNKSDIRE--LDE 197
+ RAIR + +++ P K K KS+ ++ P D+ E L E
Sbjct: 150 SEQRAIRVKRVVDKKRLSKLEPEPHTKRKEPASEKSSHNASQDSEEKPAAEDLPEKPLAE 209
Query: 198 IQPE-----------PLTVQQ-QLLDDETRALQVELTSLLDAVQQTETKMVEVSALNHLM 245
QPE L+ ++ Q+ + E + L E+ SL D V+Q E K+VE+S L +
Sbjct: 210 SQPELGTWGDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGKVVEISRLQEIF 269
Query: 246 STHILHQAQQIEHLYEQAVEATKNVELGNKELSQAIRRNTSSRTFLLLFLFVLTFSILFL 305
+ +L Q +I+ +++ V AT+N++ GN+++ +AI+ N R ++L FL + +FS+LFL
Sbjct: 270 TEKVLQQETEIDSIHQLVVGATENIKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFL 329
Query: 306 DWY 308
DWY
Sbjct: 330 DWY 332
>sp|Q5REB4|STX18_PONAB Syntaxin-18 OS=Pongo abelii GN=STX18 PE=2 SV=1
Length = 335
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 147/308 (47%), Gaps = 57/308 (18%)
Query: 41 PRERSSFTKAALKTLESIGALEQFILNHRKDYV--------EMQRTTEQERDSIEHEVTA 92
PR + F+ A + + IG L F+L HRKDY+ E R T+ ERD I+ +
Sbjct: 43 PRPKGDFSSRAREVISHIGKLRDFLLEHRKDYINAYSHTMSEYGRMTDTERDQIDQDAQI 102
Query: 93 FIKTCKEQIDILQNSINDDEANSKGWLGRKGDNSNADTIAHKHGVVLILSEKLHSVTAQF 152
F++TC E I L+ + E +S+ H+ V+ + + L V +
Sbjct: 103 FMRTCSEAIQQLRTEAHK-EIHSQ------------QVKEHRTAVLDFIEDYLKRVCKLY 149
Query: 153 DQMRAIRFQDAINRAM-----PRRKLK-RETVSKSADISTPNK----------------- 189
+ RAIR + +++ P K RE+ S +P+K
Sbjct: 150 SEQRAIRVKRVVDKKRLSKLEPEPNTKTRESTSSEKVSRSPSKDSEENPATEERPEKILA 209
Query: 190 ---------SDIRELDEIQPEPLTVQQQLLDDETRALQVELTSLLDAVQQTETKMVEVSA 240
D + DE+ PE + Q+ + E + L E+ SL D V+Q E ++VE+S
Sbjct: 210 ETQPELGTWGDGKGEDELSPEEI----QMFEQENQRLIGEMNSLFDEVRQIEGRVVEISR 265
Query: 241 LNHLMSTHILHQAQQIEHLYEQAVEATKNVELGNKELSQAIRRNTSSRTFLLLFLFVLTF 300
L + + +L Q +I+ +++ V AT+N++ GN+++ +AI+ N R ++L FL + +F
Sbjct: 266 LQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNEDIREAIKNNAGFRVWILFFLVMCSF 325
Query: 301 SILFLDWY 308
S+LFLDWY
Sbjct: 326 SLLFLDWY 333
>sp|Q8VDS8|STX18_MOUSE Syntaxin-18 OS=Mus musculus GN=Stx18 PE=2 SV=2
Length = 334
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 145/303 (47%), Gaps = 48/303 (15%)
Query: 41 PRERSSFTKAALKTLESIGALEQFILNHRKDYV--------EMQRTTEQERDSIEHEVTA 92
PR + F+ A + + IG L F+L HRK+Y+ + R T+ ERD I+ +
Sbjct: 43 PRPKGDFSSRAREVISHIGKLRDFLLEHRKEYINAYSHTMSDYGRMTDTERDQIDQDAQI 102
Query: 93 FIKTCKEQIDILQNSINDDEANSKGWLGRKGDNSNADTIAHKHGVVLILSEKLHSVTAQF 152
FI+TC E I L+ + E +S+ H+ V+ + + L V +
Sbjct: 103 FIRTCSEAIHQLRTEAHK-EIHSQ------------QVKEHRTAVLDFVDDYLKRVCKLY 149
Query: 153 DQMRAIRFQDAINR-------AMPRRKLKRETVSKSADISTPNKSDIRELDEIQPEPLTV 205
+ RAIR + +++ P K K T K+ ++ + +E+ +PL
Sbjct: 150 SEQRAIRVKRVVDKKRLSKLEPEPHTKRKDSTSEKAPQNASQDSEGKPAAEELPEKPLAE 209
Query: 206 QQ--------------------QLLDDETRALQVELTSLLDAVQQTETKMVEVSALNHLM 245
Q Q+ + E + L E+ SL D V+Q E K+VE+S L +
Sbjct: 210 SQPELGTWGDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGKVVEISRLQEIF 269
Query: 246 STHILHQAQQIEHLYEQAVEATKNVELGNKELSQAIRRNTSSRTFLLLFLFVLTFSILFL 305
+ +L Q +I+ +++ V AT+N++ GN+++ +AI+ N R ++L FL + +FS+LFL
Sbjct: 270 TEKVLQQETEIDSIHQLVVGATENIKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFL 329
Query: 306 DWY 308
DWY
Sbjct: 330 DWY 332
>sp|O94531|UFE1_SCHPO Syntaxin ufe1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=ufe1 PE=1 SV=1
Length = 319
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 27/239 (11%)
Query: 80 EQERDSIEHEVTAFIKTCKEQIDILQNSINDDEA---NSKGWLGRKGDNSNADT----IA 132
E +RD IEHEV++ I +C QI LQ + + ++ GWL D S +A
Sbjct: 89 EVQRDEIEHEVSSAISSCIHQIAKLQEIVKEQQSQIPKKSGWLQGLRDPSKLSKKETLVA 148
Query: 133 HKHGVVLILSEKLHSVTAQFDQMRAIRFQDAINRAMPRRKLKRETVSKSADISTPNKSDI 192
H V+ L +L V++ ++ +R + R +R + ++D T N +D
Sbjct: 149 HHSSVLWYLQSELSDVSSVLYHLQDLRLK----RGQEKRNI-------ASDFLTKNPTDE 197
Query: 193 RELDEIQPEP------LTVQQQLLDDETRALQVELTSLLDAVQQTETKMVEVSALNHLMS 246
EI PE Q Q L+ E L E ++ ++ T + +++ L +S
Sbjct: 198 NSAVEI-PESELQTFFTQQQLQELEQENDVLLQEFEHTMERLRDTGKSLADITRLQSEIS 256
Query: 247 THILHQAQQIEHLYEQAVEATKNVELGNKELSQAIRRNTSSRTFLLLFLFVLTFSILFL 305
+ Q+ E LY+ A+ ++ GN++L +A R SSRT LLF +L L
Sbjct: 257 AQLSIQSSAAEKLYDDALNVMDSLSGGNQQLIKAKSR--SSRTARLLFCIFTVMGLLLL 313
>sp|P41834|UFE1_YEAST Syntaxin UFE1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=UFE1 PE=1 SV=2
Length = 346
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 126/298 (42%), Gaps = 35/298 (11%)
Query: 44 RSSFTKAALKTLESIGALEQFILNHRKDYVEMQRTTEQERDSIEHEVTAFIKTCKEQIDI 103
R SF K + L+ + L + I K+Y++ ++ E+D + E I+ ++ +
Sbjct: 48 RDSFIKECARLLKFLVELNKVIKQIEKNYLDDFNMSDAEKDEFDMECRLQIQQYFKKFEF 107
Query: 104 LQN--------SINDDEANSKGW---LGRKGDNSN---------ADTIAHKHGVVLILSE 143
L+N S+ ++ S W L K DN+ + GV+ L+
Sbjct: 108 LENYEMERHNLSLKRFQSKSHRWSKILSNKNDNTKHVIHPQDIENGVYEFRLGVLRCLNL 167
Query: 144 KLHSVTAQFDQMRAIRF--QDAIN-RAMPRRKLKRE-----------TVSKSADISTPNK 189
+ V+++F ++ R ++ +N + P L +VS+SA + T +
Sbjct: 168 WIKYVSSKFTTIQQERLILENKMNFNSTPMPTLSNNADDFSADAIDISVSQSAPVETV-Q 226
Query: 190 SDIRELDEIQPEPLTVQQQLLDDETRALQVELTSLLDAVQQTETKMVEVSALNHLMSTHI 249
+++ +E + Q Q+L+ E L + L V+ ++++ + + +S H+
Sbjct: 227 DEVKHYEETISKLTQEQLQVLETEHSELLNQKNEQLKKVETINKTILDIVNIQNELSNHL 286
Query: 250 LHQAQQIEHLYEQAVEATKNVELGNKELSQAIRRNTSSRTFLLLFLFVLTFSILFLDW 307
Q+Q I + + N++ GNKEL +A R + ++ ILFLD+
Sbjct: 287 TVQSQNINLMLNNQDDIELNIKKGNKELRKAKRAAGRTAKMTTYGAIIMGVFILFLDY 344
>sp|Q8K1E0|STX5_MOUSE Syntaxin-5 OS=Mus musculus GN=Stx5 PE=1 SV=3
Length = 355
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 4 IRDRTEDFKDVARH-TAVSLGYDESKLAAIMASFIIHKPRERSSFTKAALKTLE----SI 58
RDRT++F+ + + G SK A +H R+ S FT A + + +
Sbjct: 57 CRDRTQEFQSACKSLQSRQNGIQTSKPA-------LHAARQCSEFTLMARRIGKDLSNTF 109
Query: 59 GALEQF-ILNHRKDYVEMQRTTEQERDSIEHEVTAFIKTCKEQIDILQNSINDDEANSKG 117
LE+ IL RK + + E E E+T IK DI NS+N A +
Sbjct: 110 AKLEKLTILAKRKSLFD-DKAVEIE------ELTYIIKQ-----DI--NSLNKQIAQLQD 155
Query: 118 WLGRKGDNSNADTIAHKHGVVLILSEKLHSVTAQFDQMRAIRFQDAINRAMPRRKLKRET 177
++ KG S H + +V+ L KL S++ F + +R ++ + R + R
Sbjct: 156 FVRAKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRNRREQFSRAP 215
Query: 178 VSKSADISTPNK---------SDIRELDEI---QPEPLTVQQ-QLLDDETRALQVELTSL 224
V SA PN ++ R ++ +P T QQ QL+D++ +Q S
Sbjct: 216 V--SALPLAPNNLGGGPIILGAESRASRDVAIDMMDPRTSQQLQLIDEQDSYIQ----SR 269
Query: 225 LDAVQQTETKMVEVSALNHLMSTHILHQAQQIEHLYEQAVEATKNVELGNKELSQAIRRN 284
D +Q E+ +VE+ ++ ++ + Q + I+ + E + A +VE + E+ + +
Sbjct: 270 ADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSV 329
Query: 285 TSSRTFLL 292
TS+R ++
Sbjct: 330 TSNRWLMV 337
>sp|Q08851|STX5_RAT Syntaxin-5 OS=Rattus norvegicus GN=Stx5 PE=1 SV=2
Length = 355
Score = 38.1 bits (87), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 132/306 (43%), Gaps = 42/306 (13%)
Query: 4 IRDRTEDFKDVARH-TAVSLGYDESKLAAIMASFIIHKPRERSSFTKAALKTLE----SI 58
RDRT++F + + G +K A +H R+ S FT A + + +
Sbjct: 57 CRDRTQEFLSACKSLQSRQNGIQTNKPA-------LHATRQCSEFTLMARRIGKDLSNTF 109
Query: 59 GALEQF-ILNHRKDYVEMQRTTEQERDSIEHEVTAFIKTCKEQIDILQNSINDDEANSKG 117
LE+ IL RK + + E E E+T IK DI NS+N A +
Sbjct: 110 AKLEKLTILAKRKSLFD-DKAVEIE------ELTYIIKQ-----DI--NSLNKQIAQLQD 155
Query: 118 WLGRKGDNSNADTIAHKHGVVLILSEKLHSVTAQFDQMRAIRFQDAINRAMPRRKLKRET 177
++ KG S H + +V+ L KL S++ F + +R ++ + R + R
Sbjct: 156 FVRAKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRNRREQFSRAP 215
Query: 178 VS---------KSADISTPNKSDI-RELDEIQPEPLTVQQ-QLLDDETRALQVELTSLLD 226
VS I +S R++ +P T QQ QL+D++ +Q S D
Sbjct: 216 VSALPLAPNNLGGGPIVLGGESRASRDVAIDMMDPRTSQQLQLIDEQDSYIQ----SRAD 271
Query: 227 AVQQTETKMVEVSALNHLMSTHILHQAQQIEHLYEQAVEATKNVELGNKELSQAIRRNTS 286
+Q E+ +VE+ ++ ++ + Q + I+ + E + A +VE + E+ + + TS
Sbjct: 272 TMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTS 331
Query: 287 SRTFLL 292
+R ++
Sbjct: 332 NRWLMV 337
>sp|Q08DB5|STX5_BOVIN Syntaxin-5 OS=Bos taurus GN=STX5 PE=2 SV=1
Length = 355
Score = 37.7 bits (86), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 136/312 (43%), Gaps = 54/312 (17%)
Query: 4 IRDRTEDFKDVARHTAVSLGYDESKLAAIMASFIIHKP-----RERSSFTKAALKTLE-- 56
RDRT++F + +S+ I A +KP R+RS FT A + +
Sbjct: 57 CRDRTQEFLSACKSL-------QSRQNGIQA----NKPALRAVRQRSEFTLMAKRIGKDL 105
Query: 57 --SIGALEQF-ILNHRKDYVEMQRTTEQERDSIEHEVTAFIKTCKEQIDILQNSINDDEA 113
+ LE+ IL RK + + E E E+T IK DI NS+N A
Sbjct: 106 SNTFAKLEKLTILAKRKSLFD-DKAVEIE------ELTYIIKQ-----DI--NSLNKQIA 151
Query: 114 NSKGWLGRKGDNSNADTIAHKHGVVLILSEKLHSVTAQFDQMRAIRFQDAINRAMPRRKL 173
+ ++ KG S H + +V+ L KL S++ F + +R ++ + R +
Sbjct: 152 QLQDFVRAKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQF 211
Query: 174 KRETVSKSADISTPN---------KSDIRELDEIQPEPL---TVQQ-QLLDDETRALQVE 220
R V SA PN ++ R ++ + + T QQ QL+D++ +Q
Sbjct: 212 SRAPV--SALPLAPNHLGGGAVVLGAESRASGDVAIDMMDSRTSQQLQLIDEQDSYIQ-- 267
Query: 221 LTSLLDAVQQTETKMVEVSALNHLMSTHILHQAQQIEHLYEQAVEATKNVELGNKELSQA 280
S D +Q E+ +VE+ ++ ++ + Q + I+ + E + A +VE + E+ +
Sbjct: 268 --SRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKY 325
Query: 281 IRRNTSSRTFLL 292
+ TS+R ++
Sbjct: 326 FQSVTSNRWLMV 337
>sp|Q13190|STX5_HUMAN Syntaxin-5 OS=Homo sapiens GN=STX5 PE=1 SV=2
Length = 355
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 129/305 (42%), Gaps = 40/305 (13%)
Query: 4 IRDRTEDFKDVARHTAVSLGYDESKLAAIMASFIIHKPRERSSFTKAALKTLE----SIG 59
RDRT++F + ++ A+ A R+RS FT A + + +
Sbjct: 57 CRDRTQEFLSACKSLQTRQNGIQTNKPALRA------VRQRSEFTLMAKRIGKDLSNTFA 110
Query: 60 ALEQF-ILNHRKDYVEMQRTTEQERDSIEHEVTAFIKTCKEQIDILQNSINDDEANSKGW 118
LE+ IL RK + + E E E+T IK DI NS+N A + +
Sbjct: 111 KLEKLTILAKRKSLFD-DKAVEIE------ELTYIIKQ-----DI--NSLNKQIAQLQDF 156
Query: 119 LGRKGDNSNADTIAHKHGVVLILSEKLHSVTAQFDQMRAIRFQDAINRAMPRRKLKRETV 178
+ KG S H + +V+ L KL S++ F + +R ++ + R + R V
Sbjct: 157 VRAKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSRAPV 216
Query: 179 S----------KSADISTPNKSDIRELDEIQPEPLTVQQ-QLLDDETRALQVELTSLLDA 227
S A + +++ + T QQ QL+D++ +Q S D
Sbjct: 217 SALPLAPNHLGGGAVVLGAESHASKDVAIDMMDSRTSQQLQLIDEQDSYIQ----SRADT 272
Query: 228 VQQTETKMVEVSALNHLMSTHILHQAQQIEHLYEQAVEATKNVELGNKELSQAIRRNTSS 287
+Q E+ +VE+ ++ ++ + Q + I+ + E + A +VE + E+ + + TS+
Sbjct: 273 MQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTSN 332
Query: 288 RTFLL 292
R ++
Sbjct: 333 RWLMV 337
>sp|O64791|SY124_ARATH Syntaxin-124 OS=Arabidopsis thaliana GN=SYP124 PE=2 SV=1
Length = 303
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 226 DAVQQTETKMVEVSALNHLMSTHILHQAQQIEHLYEQAVEATKNVELGNKELSQAIRRNT 285
DAV++ E ++E+ + M+ + Q QQ+ + +A+ V G +L A
Sbjct: 211 DAVKEIEKNLIELHQVFLDMAALVESQGQQLNDIESHVSKASSFVRRGTDQLQDAREYQK 270
Query: 286 SSR--TFLLLFLFVLTFSILFL 305
SSR T + LF++ F++L +
Sbjct: 271 SSRKWTCYAILLFIVVFALLLI 292
>sp|P23615|SPT6_YEAST Transcription elongation factor SPT6 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SPT6 PE=1 SV=1
Length = 1451
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 234 KMVEVSALNHL-MSTHILHQAQQIEHLYEQAVEATKNVELG 273
KMVE +LN L + H+ QAQ IEHL++ A+E T ++
Sbjct: 643 KMVEAESLNLLSVKLHMSSQAQYIEHLFQIALETTNTSDIA 683
>sp|Q0P5H9|TTC5_BOVIN Tetratricopeptide repeat protein 5 OS=Bos taurus GN=TTC5 PE=2 SV=1
Length = 440
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 195 LDEIQPEPLTVQQQLLDDETRALQVELTSLLDAVQQTETKMVEVSALNHLMSTHI 249
LD PEP +QQLLD TR LTS L++ + +TK ++ S L +L H+
Sbjct: 253 LDPAWPEPWQREQQLLDFLTR-----LTSFLESKGKVKTKKLQ-SMLGNLRPAHL 301
>sp|B3ESF6|QUEA_AMOA5 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
OS=Amoebophilus asiaticus (strain 5a2) GN=queA PE=3 SV=1
Length = 348
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 249 ILHQAQQIEHLYEQAVEATKNVELGNK------ELSQAIRRNTSSRTFLLLFLF 296
+L + + EHL++ VE + + +GNK EL + NT+SR L FLF
Sbjct: 83 LLRELESGEHLWDTLVEPARKIRVGNKLYFGDGELVAEVLDNTTSRGRTLKFLF 136
>sp|Q92JH0|PARC_RICCN DNA topoisomerase 4 subunit A OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=parC PE=3 SV=1
Length = 738
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 17/101 (16%)
Query: 37 IIHKPRERSSFTKAALKTLESIGALEQFILNHRKDYVEMQRTTEQERDSIEHEVTAFIKT 96
I++ P+E K +KT+++ L I R + E+ T + ++TAFI
Sbjct: 453 ILNNPKELWKIVKKEIKTVQTKFGLNTVIGARRTSFEEVTLTNQVV------DITAFI-- 504
Query: 97 CKEQIDILQNSINDDEANSKGWL-GRKGDNSNADTIAHKHG 136
KE I I+ + GW+ KG N++ TI +K G
Sbjct: 505 TKEPITII--------CSKMGWVRSLKGHNTDLSTIKYKEG 537
>sp|P45608|PHOR_KLEPN Phosphate regulon sensor protein PhoR OS=Klebsiella pneumoniae
GN=phoR PE=3 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 38 IHKPRERSSFTKAALK---TLESIGALEQFILNHRKDYVEMQRTTEQERDSIEHEVTAFI 94
+H RE++ + +K TL I A +N R D M R E+E ++ E I
Sbjct: 243 LHTMREQTQRMEGLVKQLLTLSRIEAAPALAMNDRIDVPMMLRVVEREAQTLSQEKQTLI 302
Query: 95 KTCKEQIDILQN 106
T EQ+ +L N
Sbjct: 303 FTVDEQLKVLGN 314
>sp|P0C6T4|R1A_BCHK4 Replicase polyprotein 1a OS=Bat coronavirus HKU4 GN=1a PE=3 SV=1
Length = 4434
Score = 31.6 bits (70), Expect = 6.9, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 184 ISTPNKSDIRELDEIQPEPLTVQQQLLDDETRALQVELTSLLDAVQQTETKMVEV 238
++ PN++ +R+L ++ P L + +L D T L ++D V T K++EV
Sbjct: 1976 LNKPNRASLRQLYDVAPIVLDNKYTVLQDNTSQLVEHNVPVVDDVPITTRKLIEV 2030
>sp|P0C6W3|R1AB_BCHK4 Replicase polyprotein 1ab OS=Bat coronavirus HKU4 GN=rep PE=3 SV=1
Length = 7119
Score = 31.6 bits (70), Expect = 6.9, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 184 ISTPNKSDIRELDEIQPEPLTVQQQLLDDETRALQVELTSLLDAVQQTETKMVEV 238
++ PN++ +R+L ++ P L + +L D T L ++D V T K++EV
Sbjct: 1976 LNKPNRASLRQLYDVAPIVLDNKYTVLQDNTSQLVEHNVPVVDDVPITTRKLIEV 2030
>sp|Q9SRV7|SY131_ARATH Putative syntaxin-131 OS=Arabidopsis thaliana GN=SYP131 PE=3 SV=1
Length = 306
Score = 31.6 bits (70), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 38/67 (56%)
Query: 226 DAVQQTETKMVEVSALNHLMSTHILHQAQQIEHLYEQAVEATKNVELGNKELSQAIRRNT 285
DAV+ E K++++ + M+ + Q + ++++ A +V+ GN +L++A++
Sbjct: 213 DAVRDLEKKLLDLQQVFLDMAVLVDAQGEMLDNIENMVSSAVDHVQSGNNQLTKAVKSQK 272
Query: 286 SSRTFLL 292
SSR ++
Sbjct: 273 SSRKWMC 279
>sp|Q14004|CDK13_HUMAN Cyclin-dependent kinase 13 OS=Homo sapiens GN=CDK13 PE=1 SV=2
Length = 1512
Score = 31.2 bits (69), Expect = 9.2, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 13/114 (11%)
Query: 135 HGVVLILSEKLHSVT----AQFDQMRAIRFQDAINRAMPRRKLKR---ETVSKSADISTP 187
H + IL L S T A F Q+ I+ + + + L T K D STP
Sbjct: 1089 HSELAILLNLLQSKTSVNMADFVQVLNIKVNSETQQQLNKINLPAGILATGEKQTDPSTP 1148
Query: 188 NKSDIRELDEIQPEPLTVQQQLLDDETR-----ALQVELTSLLDAVQQTETKMV 236
+ + L IQP T+Q ++ D + A V LT L+ A QQ++ K V
Sbjct: 1149 QQESSKPLGGIQPSSQTIQPKVETDAAQAAVQSAFAVLLTQLIKA-QQSKQKDV 1201
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.129 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,394,722
Number of Sequences: 539616
Number of extensions: 3448989
Number of successful extensions: 14599
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 130
Number of HSP's that attempted gapping in prelim test: 14486
Number of HSP's gapped (non-prelim): 246
length of query: 309
length of database: 191,569,459
effective HSP length: 117
effective length of query: 192
effective length of database: 128,434,387
effective search space: 24659402304
effective search space used: 24659402304
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)