Query 021701
Match_columns 309
No_of_seqs 279 out of 2165
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 05:00:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021701.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021701hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02864 enoyl-CoA hydratase 100.0 6.1E-65 1.3E-69 463.2 38.3 309 1-309 2-310 (310)
2 KOG1206 Peroxisomal multifunct 100.0 6.9E-44 1.5E-48 298.9 6.0 261 22-304 6-267 (272)
3 cd03448 HDE_HSD HDE_HSD The R 99.9 2.5E-26 5.3E-31 182.2 15.7 120 183-302 1-121 (122)
4 cd03447 FAS_MaoC FAS_MaoC, the 99.9 1.4E-25 3.1E-30 178.9 17.2 117 189-305 5-126 (126)
5 PF13452 MaoC_dehydrat_N: N-te 99.9 1.4E-25 3E-30 180.7 10.0 129 11-148 1-132 (132)
6 PRK13691 (3R)-hydroxyacyl-ACP 99.9 1.9E-23 4.1E-28 174.1 14.0 146 5-158 1-148 (166)
7 cd03453 SAV4209_like SAV4209_l 99.9 8E-23 1.7E-27 163.6 16.6 110 192-303 10-127 (127)
8 cd03455 SAV4209 SAV4209 is a S 99.9 1E-22 2.2E-27 162.0 14.5 109 193-303 10-123 (123)
9 COG3777 Uncharacterized conser 99.9 2E-23 4.2E-28 177.2 10.7 258 9-300 6-271 (273)
10 PRK13692 (3R)-hydroxyacyl-ACP 99.9 2.1E-21 4.5E-26 160.9 14.2 145 5-157 1-147 (159)
11 COG2030 MaoC Acyl dehydratase 99.9 2.9E-21 6.3E-26 160.3 13.3 125 181-305 21-155 (159)
12 PRK13693 (3R)-hydroxyacyl-ACP 99.9 2.8E-20 6E-25 151.5 16.5 110 193-304 21-141 (142)
13 cd03452 MaoC_C MaoC_C The C-t 99.9 5E-21 1.1E-25 156.1 11.7 110 193-305 17-139 (142)
14 cd03449 R_hydratase (R)-hydrat 99.9 2.6E-20 5.7E-25 148.7 15.7 110 193-303 12-127 (128)
15 cd03441 R_hydratase_like (R)-h 99.8 3.7E-20 8E-25 147.4 15.7 111 192-302 8-126 (127)
16 cd03451 FkbR2 FkbR2 is a Strep 99.8 2.3E-20 5E-25 152.7 12.2 115 193-307 20-145 (146)
17 PF01575 MaoC_dehydratas: MaoC 99.8 1.2E-20 2.6E-25 149.9 9.0 89 191-279 15-103 (122)
18 cd03446 MaoC_like MoaC_like 99.8 2.8E-19 6.1E-24 145.2 13.9 109 193-303 17-139 (140)
19 PRK08190 bifunctional enoyl-Co 99.8 3.8E-19 8.3E-24 171.3 16.4 116 192-308 24-145 (466)
20 cd03454 YdeM YdeM is a Bacillu 99.8 1.5E-18 3.2E-23 141.1 12.7 110 193-303 16-138 (140)
21 cd03450 NodN NodN (nodulation 99.8 9.1E-18 2E-22 137.6 14.8 109 192-300 22-143 (149)
22 PRK13691 (3R)-hydroxyacyl-ACP 99.8 1.9E-17 4.2E-22 138.0 14.8 111 193-304 19-144 (166)
23 PRK13692 (3R)-hydroxyacyl-ACP 99.7 5.6E-17 1.2E-21 134.4 15.0 113 193-305 19-145 (159)
24 TIGR02278 PaaN-DH phenylacetic 99.7 3.5E-16 7.5E-21 156.6 12.3 110 193-303 540-660 (663)
25 cd03450 NodN NodN (nodulation 99.7 8.7E-16 1.9E-20 125.9 10.5 142 4-154 4-147 (149)
26 PRK11563 bifunctional aldehyde 99.6 9.6E-16 2.1E-20 154.2 12.5 110 193-303 552-672 (675)
27 cd03452 MaoC_C MaoC_C The C-t 99.6 3E-15 6.4E-20 122.0 10.3 134 12-157 6-141 (142)
28 cd03446 MaoC_like MoaC_like 99.6 7.5E-15 1.6E-19 119.1 11.6 132 12-153 6-139 (140)
29 cd03454 YdeM YdeM is a Bacillu 99.6 7.1E-15 1.5E-19 119.4 9.9 133 12-155 5-140 (140)
30 cd03451 FkbR2 FkbR2 is a Strep 99.6 2.3E-14 4.9E-19 117.1 10.4 133 12-156 8-144 (146)
31 cd03453 SAV4209_like SAV4209_l 99.5 8.6E-14 1.9E-18 111.2 9.5 125 13-151 1-125 (127)
32 cd03449 R_hydratase (R)-hydrat 99.5 2.2E-13 4.7E-18 108.5 10.5 125 13-153 3-127 (128)
33 cd03455 SAV4209 SAV4209 is a S 99.4 1.2E-12 2.6E-17 103.9 9.5 122 14-152 1-122 (123)
34 cd03441 R_hydratase_like (R)-h 99.4 2.2E-12 4.7E-17 102.4 10.6 119 21-151 7-125 (127)
35 PRK08190 bifunctional enoyl-Co 99.3 8.9E-12 1.9E-16 120.4 10.5 130 12-157 15-144 (466)
36 TIGR02278 PaaN-DH phenylacetic 99.2 3.6E-11 7.7E-16 120.7 9.6 131 12-154 529-661 (663)
37 PRK11563 bifunctional aldehyde 99.1 1.8E-10 3.8E-15 116.3 8.8 131 12-155 541-674 (675)
38 COG2030 MaoC Acyl dehydratase 99.0 1.6E-09 3.4E-14 90.0 9.9 133 12-155 21-155 (159)
39 cd03447 FAS_MaoC FAS_MaoC, the 99.0 2.9E-09 6.2E-14 84.9 10.3 116 21-152 7-123 (126)
40 PF13452 MaoC_dehydrat_N: N-te 99.0 1.5E-09 3.3E-14 87.0 6.7 104 193-297 13-131 (132)
41 PRK13693 (3R)-hydroxyacyl-ACP 98.7 7.4E-08 1.6E-12 78.4 9.0 116 12-143 10-130 (142)
42 PF01575 MaoC_dehydratas: MaoC 98.5 1.9E-08 4E-13 79.7 0.6 113 11-134 4-117 (122)
43 PRK04424 fatty acid biosynthes 98.4 6.6E-06 1.4E-10 69.9 11.7 79 225-304 100-181 (185)
44 PRK00006 fabZ (3R)-hydroxymyri 98.3 1.1E-05 2.5E-10 65.7 11.6 92 213-304 44-144 (147)
45 cd01288 FabZ FabZ is a 17kD be 98.3 1.3E-05 2.8E-10 63.8 11.1 92 212-303 28-129 (131)
46 cd03448 HDE_HSD HDE_HSD The R 98.0 1.2E-05 2.6E-10 63.7 6.3 107 21-148 10-116 (122)
47 PRK13188 bifunctional UDP-3-O- 97.9 0.00017 3.7E-09 69.3 13.0 94 212-305 356-460 (464)
48 PLN02864 enoyl-CoA hydratase 97.8 0.00011 2.3E-09 67.6 8.9 119 14-152 184-303 (310)
49 TIGR01750 fabZ beta-hydroxyacy 97.7 0.00062 1.3E-08 54.9 11.2 79 225-303 49-139 (140)
50 cd00493 FabA_FabZ FabA/Z, beta 97.3 0.0059 1.3E-07 48.2 12.2 76 226-301 41-128 (131)
51 cd03440 hot_dog The hotdog fol 97.2 0.0096 2.1E-07 42.1 11.6 77 225-301 14-98 (100)
52 TIGR02286 PaaD phenylacetic ac 97.2 0.0097 2.1E-07 46.1 11.9 79 225-303 29-112 (114)
53 PF03061 4HBT: Thioesterase su 96.8 0.016 3.4E-07 41.2 9.3 68 228-295 3-78 (79)
54 cd03443 PaaI_thioesterase PaaI 96.5 0.057 1.2E-06 41.1 11.2 76 227-303 29-112 (113)
55 cd01289 FabA_like Domain of un 96.5 0.056 1.2E-06 43.5 11.4 54 253-306 79-138 (138)
56 cd00586 4HBT 4-hydroxybenzoyl- 96.4 0.053 1.2E-06 40.4 10.1 58 92-154 51-108 (110)
57 PRK00006 fabZ (3R)-hydroxymyri 96.4 0.034 7.3E-07 45.1 9.3 58 92-155 88-145 (147)
58 TIGR02286 PaaD phenylacetic ac 96.3 0.052 1.1E-06 42.0 9.9 56 93-153 57-112 (114)
59 cd03445 Thioesterase_II_repeat 96.3 0.1 2.2E-06 39.0 11.1 77 225-303 14-93 (94)
60 cd00586 4HBT 4-hydroxybenzoyl- 96.1 0.17 3.8E-06 37.5 11.6 52 252-303 52-107 (110)
61 cd03440 hot_dog The hotdog fol 95.9 0.11 2.4E-06 36.4 9.4 58 90-152 42-99 (100)
62 TIGR01749 fabA beta-hydroxyacy 95.7 0.18 4E-06 42.1 11.0 85 224-308 70-168 (169)
63 PRK05174 3-hydroxydecanoyl-(ac 95.6 0.29 6.3E-06 41.0 11.8 84 225-308 74-171 (172)
64 PF07977 FabA: FabA-like domai 95.6 0.14 3.1E-06 41.0 9.6 75 225-299 46-138 (138)
65 PRK10800 acyl-CoA thioesterase 95.6 0.3 6.5E-06 38.5 11.3 60 92-156 53-112 (130)
66 TIGR00369 unchar_dom_1 unchara 95.4 0.3 6.5E-06 37.8 10.6 76 226-302 32-115 (117)
67 PF13622 4HBT_3: Thioesterase- 95.4 0.38 8.3E-06 42.5 12.7 79 226-306 9-90 (255)
68 PRK04424 fatty acid biosynthes 95.4 0.095 2.1E-06 44.5 8.2 56 93-154 126-181 (185)
69 COG5496 Predicted thioesterase 95.3 0.6 1.3E-05 36.6 11.7 87 213-300 17-109 (130)
70 TIGR00369 unchar_dom_1 unchara 95.3 0.16 3.4E-06 39.4 8.8 55 93-153 62-116 (117)
71 cd03442 BFIT_BACH Brown fat-in 95.3 0.45 9.8E-06 36.6 11.4 78 228-305 24-113 (123)
72 COG2050 PaaI HGG motif-contain 95.2 0.37 8E-06 38.8 10.9 80 225-305 49-137 (141)
73 COG0764 FabA 3-hydroxymyristoy 95.2 0.49 1.1E-05 38.5 11.4 78 226-303 55-142 (147)
74 PRK11688 hypothetical protein; 95.0 0.27 5.9E-06 40.2 9.8 57 92-154 97-153 (154)
75 PF03061 4HBT: Thioesterase su 95.0 0.17 3.6E-06 35.7 7.5 50 92-146 30-79 (79)
76 PF12119 DUF3581: Protein of u 95.0 0.12 2.5E-06 44.1 7.3 65 194-274 16-81 (218)
77 cd01288 FabZ FabZ is a 17kD be 94.9 0.21 4.5E-06 39.3 8.6 56 93-154 75-130 (131)
78 PRK10800 acyl-CoA thioesterase 94.9 0.23 5E-06 39.2 8.7 52 252-303 54-109 (130)
79 TIGR01750 fabZ beta-hydroxyacy 94.8 0.17 3.7E-06 40.5 7.8 56 92-153 84-139 (140)
80 PLN02647 acyl-CoA thioesterase 94.5 4.8 0.00011 38.8 19.0 60 97-157 149-211 (437)
81 PF13279 4HBT_2: Thioesterase- 94.5 0.67 1.5E-05 35.7 10.5 62 92-157 43-106 (121)
82 TIGR00189 tesB acyl-CoA thioes 94.4 0.37 8E-06 43.2 10.0 78 227-306 21-101 (271)
83 COG0824 FcbC Predicted thioest 94.3 0.38 8.1E-06 38.7 8.8 51 253-303 58-111 (137)
84 cd03443 PaaI_thioesterase PaaI 94.3 0.8 1.7E-05 34.6 10.3 55 93-153 58-112 (113)
85 PRK11688 hypothetical protein; 94.2 0.93 2E-05 37.1 11.1 78 225-303 54-152 (154)
86 cd00556 Thioesterase_II Thioes 94.0 0.96 2.1E-05 33.3 10.1 77 226-302 14-97 (99)
87 cd01287 FabA FabA, beta-hydrox 94.0 0.78 1.7E-05 37.5 10.1 75 225-299 48-141 (150)
88 cd03442 BFIT_BACH Brown fat-in 94.0 0.66 1.4E-05 35.6 9.4 54 99-156 57-114 (123)
89 TIGR02799 thio_ybgC tol-pal sy 93.9 0.6 1.3E-05 36.3 9.0 51 252-302 53-106 (126)
90 PRK10293 acyl-CoA esterase; Pr 93.9 1.3 2.8E-05 35.5 11.0 78 225-303 49-134 (136)
91 PRK10254 thioesterase; Provisi 93.8 0.94 2E-05 36.4 10.1 60 91-156 78-137 (137)
92 TIGR02799 thio_ybgC tol-pal sy 93.7 1.4 3E-05 34.2 10.9 60 92-157 52-111 (126)
93 PRK10254 thioesterase; Provisi 93.5 2 4.3E-05 34.5 11.5 77 226-303 50-134 (137)
94 COG2050 PaaI HGG motif-contain 93.4 0.87 1.9E-05 36.6 9.4 57 94-155 81-137 (141)
95 PLN02322 acyl-CoA thioesterase 93.4 2 4.3E-05 35.3 11.4 79 225-303 41-132 (154)
96 PF07977 FabA: FabA-like domai 93.3 0.36 7.7E-06 38.6 6.9 54 92-148 83-137 (138)
97 PF01643 Acyl-ACP_TE: Acyl-ACP 93.2 2.9 6.4E-05 37.3 13.4 60 93-157 61-121 (261)
98 COG0824 FcbC Predicted thioest 93.1 2 4.3E-05 34.4 11.0 59 93-157 57-115 (137)
99 PRK10526 acyl-CoA thioesterase 92.8 1.3 2.8E-05 40.2 10.6 80 226-307 31-113 (286)
100 PRK10293 acyl-CoA esterase; Pr 92.6 1.6 3.5E-05 35.0 9.8 57 92-154 79-135 (136)
101 cd01287 FabA FabA, beta-hydrox 92.6 1 2.2E-05 36.8 8.7 60 92-153 85-145 (150)
102 TIGR00051 acyl-CoA thioester h 92.2 2 4.4E-05 32.5 9.7 57 93-154 49-105 (117)
103 PLN02322 acyl-CoA thioesterase 92.2 2 4.3E-05 35.3 9.9 60 92-155 70-134 (154)
104 cd00556 Thioesterase_II Thioes 91.9 1.1 2.4E-05 33.0 7.6 56 93-153 43-98 (99)
105 PF13279 4HBT_2: Thioesterase- 91.3 2.2 4.7E-05 32.8 9.1 51 252-302 44-101 (121)
106 cd00493 FabA_FabZ FabA/Z, beta 91.3 2.3 5.1E-05 33.0 9.3 52 92-149 75-126 (131)
107 PRK13188 bifunctional UDP-3-O- 91.2 1.5 3.4E-05 42.4 9.5 58 93-155 403-460 (464)
108 COG1607 Acyl-CoA hydrolase [Li 91.0 5.2 0.00011 32.9 11.0 50 229-278 31-83 (157)
109 PRK10694 acyl-CoA esterase; Pr 90.6 5.7 0.00012 31.7 10.9 50 228-278 28-81 (133)
110 TIGR00051 acyl-CoA thioester h 90.1 2.8 6.2E-05 31.7 8.6 48 252-299 49-100 (117)
111 PLN02370 acyl-ACP thioesterase 89.4 21 0.00045 34.3 20.4 61 92-156 196-256 (419)
112 PRK07531 bifunctional 3-hydrox 89.2 4.4 9.5E-05 39.8 11.1 60 92-156 395-454 (495)
113 COG1607 Acyl-CoA hydrolase [Li 88.8 4.3 9.2E-05 33.4 8.9 60 98-157 62-121 (157)
114 TIGR02447 yiiD_Cterm thioester 88.8 6.7 0.00014 31.4 10.1 53 251-303 69-135 (138)
115 KOG1206 Peroxisomal multifunct 88.5 0.11 2.4E-06 45.0 -0.5 79 22-115 157-236 (272)
116 KOG3328 HGG motif-containing t 86.3 6.6 0.00014 31.8 8.4 75 227-301 54-136 (148)
117 PRK10694 acyl-CoA esterase; Pr 85.7 6.1 0.00013 31.5 8.1 60 98-157 60-122 (133)
118 COG1946 TesB Acyl-CoA thioeste 84.9 5.6 0.00012 35.9 8.2 65 88-157 221-285 (289)
119 PLN02868 acyl-CoA thioesterase 83.9 7.6 0.00016 37.1 9.3 78 227-306 158-238 (413)
120 PRK07531 bifunctional 3-hydrox 83.1 7.3 0.00016 38.3 9.0 50 253-302 397-450 (495)
121 PF14539 DUF4442: Domain of un 82.5 5.1 0.00011 31.8 6.4 57 93-153 75-131 (132)
122 TIGR02447 yiiD_Cterm thioester 82.0 4.1 8.9E-05 32.6 5.7 58 92-154 69-136 (138)
123 cd01289 FabA_like Domain of un 81.5 19 0.00041 28.7 9.4 59 91-154 77-136 (138)
124 PRK05174 3-hydroxydecanoyl-(ac 80.0 21 0.00045 29.8 9.5 56 93-151 105-161 (172)
125 TIGR00189 tesB acyl-CoA thioes 78.4 16 0.00035 32.5 9.0 60 91-155 212-271 (271)
126 PF02551 Acyl_CoA_thio: Acyl-C 77.8 28 0.00061 27.7 9.0 58 88-151 71-129 (131)
127 COG0764 FabA 3-hydroxymyristoy 77.6 28 0.00061 28.3 9.3 87 61-154 52-143 (147)
128 PLN02647 acyl-CoA thioesterase 77.1 18 0.00039 34.9 9.3 61 97-157 338-403 (437)
129 TIGR01749 fabA beta-hydroxyacy 75.5 19 0.0004 30.0 7.9 54 94-150 103-157 (169)
130 PRK10526 acyl-CoA thioesterase 73.8 20 0.00043 32.5 8.3 59 93-156 226-284 (286)
131 cd03444 Thioesterase_II_repeat 70.9 33 0.00071 25.8 7.7 58 91-153 46-103 (104)
132 KOG3328 HGG motif-containing t 67.4 62 0.0013 26.3 8.8 61 92-157 81-142 (148)
133 PF03756 AfsA: A-factor biosyn 60.2 62 0.0013 25.3 7.8 51 252-302 72-130 (132)
134 PF12119 DUF3581: Protein of u 56.7 14 0.00031 31.6 3.6 46 20-75 12-59 (218)
135 PLN02370 acyl-ACP thioesterase 56.6 87 0.0019 30.1 9.3 50 253-302 198-252 (419)
136 PF09500 YiiD_Cterm: Putative 55.7 89 0.0019 25.3 7.9 60 91-154 74-142 (144)
137 PF10989 DUF2808: Protein of u 53.2 70 0.0015 25.8 7.1 40 255-294 89-133 (146)
138 PF01835 A2M_N: MG2 domain; I 48.2 55 0.0012 24.0 5.4 41 259-300 4-55 (99)
139 PF14765 PS-DH: Polyketide syn 47.7 1.2E+02 0.0027 26.8 8.6 60 91-155 228-288 (295)
140 PF03756 AfsA: A-factor biosyn 42.0 1.6E+02 0.0035 22.8 8.0 59 92-152 71-130 (132)
141 PF14539 DUF4442: Domain of un 40.8 1.8E+02 0.0038 22.8 9.1 48 253-302 76-130 (132)
142 PF01643 Acyl-ACP_TE: Acyl-ACP 39.2 2.2E+02 0.0048 25.2 8.7 51 253-303 62-117 (261)
143 PLN02868 acyl-CoA thioesterase 39.0 94 0.002 29.6 6.7 56 93-153 357-412 (413)
144 PF09500 YiiD_Cterm: Putative 38.1 2.2E+02 0.0047 23.1 7.7 77 223-299 46-137 (144)
145 COG1946 TesB Acyl-CoA thioeste 34.3 2.2E+02 0.0048 25.9 7.7 79 226-306 31-112 (289)
146 PF13622 4HBT_3: Thioesterase- 34.2 2.1E+02 0.0045 24.9 7.7 54 97-157 38-91 (255)
147 COG0335 RplS Ribosomal protein 28.0 1.1E+02 0.0025 23.6 4.1 18 263-280 18-37 (115)
148 PF10862 FcoT: FcoT-like thioe 27.0 3.6E+02 0.0077 22.2 7.6 52 90-143 93-147 (157)
No 1
>PLN02864 enoyl-CoA hydratase
Probab=100.00 E-value=6.1e-65 Score=463.15 Aligned_cols=309 Identities=74% Similarity=1.194 Sum_probs=270.9
Q ss_pred CCCcCCCChhhhcCCCCCCeeEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCeeeeecccCcCCCCC
Q 021701 1 MAKSSGINPELLLSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGA 80 (309)
Q Consensus 1 ~~~~m~~d~~~~iG~~~~~~~~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~ 80 (309)
|--..++|+++++|+++++.++.|+++|+++||+|||+++.+|++.++++|+||..||++++|||||++++++.......
T Consensus 2 ~~~~~~~~~~~~~g~~~p~~~~~~~~~d~~lyAl~vG~~~~~~~d~~~l~~~ye~~g~~~~~a~PTf~~vl~~~~~~~~~ 81 (310)
T PLN02864 2 MPPISPFDPDLVLAHKFPEVTYSYTERDVALYALGVGACGRDAVDEDELKYVYHRDGQQFIKVLPTFASLFNLGSLDGFG 81 (310)
T ss_pred CCCCCCCCHHHHhCCcCCCeeEEECHHHHHHHHHhcCCCCCCCCChHHhhhhhccccCCCcccCCceeeeccccCccccc
Confidence 55677899999999999999999999999999999996455667778999999977899999999999999865421111
Q ss_pred CCCCCCCCCCceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEeccCCC
Q 021701 81 IDLPGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAGGF 160 (309)
Q Consensus 81 ~~~~~~~~~~~~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg~~~~ 160 (309)
...|+++||+.++||++|+|++||||+++++|+++++|.++++||+|.+++++.++.+.++|++||++++|+++|+.++|
T Consensus 82 ~~~p~~~~d~~~lVHgeq~i~~~rPlp~~~~l~~~~~v~~v~dkG~ga~v~~~~~~~d~~~Ge~v~t~~st~~~Rg~gg~ 161 (310)
T PLN02864 82 LDLPGLNYDPSLLLHGQQYIEIYKPIPSSASVRNKVSIAGLHDKGKAAILELETLSYEKDSGELLCMNRSTIFLRGAGGF 161 (310)
T ss_pred ccCCCCCCChhheeeccceEEEECCCCCCCEEEEEEEEEEEEeCCCcEEEEEEEEEEeCCCCcEEEEEEEEEEEeCCCCC
Confidence 35688899999999999999999999999999999999999999999999999887644799999999999999999988
Q ss_pred CCCCCCCCCCCCCCCCcccCCCCCCCCceEEeecCHHHHHHHHHHhCCCCCCCCCHHHHhhcCCCCceechHhHHHHHHH
Q 021701 161 SNSSQPFSYSKYQTIPVSVVKIPKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVR 240 (309)
Q Consensus 161 ~~~~~p~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~sgD~npiH~d~~~A~~~G~~~~i~hG~~~~~~~~~ 240 (309)
++++.|......+.........|++.|+.+.+..++.++++||++|||+||||+|+++|+..||+++|+||||+++++.+
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~p~~~pd~~~~~~t~~~~~~~a~lSGD~NPiH~d~~~A~~~gf~~~IaHGm~t~g~~~~ 241 (310)
T PLN02864 162 SNSSQPFSYSNYPTNQVSAVKIPKSQPDAVFEDQTQPSQALLYRLSGDYNPLHSDPMFAKVAGFTRPILHGLCTLGFAVR 241 (310)
T ss_pred CCCCCCccccccccccccccCCCCCCCCeEEeeccChhHHHHHHhhCCCCcccCCHHHHhhCCCCCceeccHHHHHHHHH
Confidence 87654421111121122345678889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCccEEEEEEEECcCCCCCCEEEEEEEEECcEEEEEEEEecCCceEEEEEEEEEeccCCC
Q 021701 241 AIIKFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWLQGLRVIYQVKVKERNRSALSGFVDVHRLASSL 309 (309)
Q Consensus 241 ~~~~~~~~g~~~~~~~~~~rf~~pv~~gdtl~~~~~~~~~~v~~~~~~~~~g~~v~~g~a~v~~p~~~~ 309 (309)
++.++++++++..+.++++||.+||||||||++++|++++.+.|++++||+|++|++|.+++..+++||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~rF~~PV~pGdtl~~~~~~~~~~v~~~~~~~~~g~~vl~G~a~~~~~~~~~ 310 (310)
T PLN02864 242 AVIKCFCNGDPTAVKTISGRFLLHVYPGETLVTEMWLEGLRVIYQTKVKERNKAVLSGYVDLRHLTSSL 310 (310)
T ss_pred HHHhhhcCCCCceEEEEEEEEcCCccCCCEEEEEEEeCCCEEEEEEEEecCCeEEEEEEEEEecccCCC
Confidence 988888888888889999999999999999999999988899999988899999999999999888886
No 2
>KOG1206 consensus Peroxisomal multifunctional beta-oxidation protein and related enzymes [Lipid transport and metabolism]
Probab=100.00 E-value=6.9e-44 Score=298.89 Aligned_cols=261 Identities=39% Similarity=0.658 Sum_probs=226.2
Q ss_pred EEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCeeeeecccCcCCCCCCCCCCCCCCCceeeeeeEEEE
Q 021701 22 FTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPRLLLHGQQYME 101 (309)
Q Consensus 22 ~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~~~~vH~~q~~~ 101 (309)
+.+++++.+.||+++|+ . ..|+.|+||++ +||.+.|||.+++ +.. ...+..+.-.+|..+++|+||.++
T Consensus 6 f~~~tkd~I~y~lg~g~-t-----~kd~~~~yeN~--~dF~~lPt~~v~p-~~~--~~~~~~~~d~~~~~~~lhgeqy~e 74 (272)
T KOG1206|consen 6 FKYTTKDCILYALGLGA-T-----SKDLKYTYEND--PDFQVLPTFAVIP-ATA--TLLMDNLVDNFDYAMLLHGEQYFE 74 (272)
T ss_pred ccccHHHHHHHHhcccc-c-----hhHHHHHhccC--ccceeccceeeeh-hHH--HHHhhccchhHHHHHHHHHHHHHH
Confidence 68999999999999996 2 35899999997 9999999999987 332 211233344688999999999999
Q ss_pred EeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEeccCCCCCCCCCCCCCCCCCCCcccCC
Q 021701 102 LYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSVVK 181 (309)
Q Consensus 102 ~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg~~~~~~~~~p~~~~~~~~~~~~~~~ 181 (309)
...+++..+.+.+.+++.++-+|++|.++....+.+ |++|.+.+.+.++.++||.+.+++++.+.. ..-.+.
T Consensus 75 ~~~~l~~~g~l~t~~~~~~v~dkg~~a~v~~~~et~-d~~~k~i~~~~~stf~~g~~~~~~k~~~~~-------~~~av~ 146 (272)
T KOG1206|consen 75 LCTTLPSNGTLKTLAKVLDVLDKGSGALVVGNFETY-DETGKLIAYNQGSTFIRGAGVFGGKRDGKR-------AKKAVQ 146 (272)
T ss_pred HHccccccchhhhcceeEEeccCcceeEEEeeeeee-cccccchhhhcCceeEecccccCccccchh-------heeecc
Confidence 999999999999999999999999999999888876 689999999999999999988877643311 123456
Q ss_pred CCCCCCceEEeecCHHHHHHHHHHhCCCCCCCCCHHHHhhcCCCCceechHhHHHHHHHHHHHhhhcCCCccEEEEEEEE
Q 021701 182 IPKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRF 261 (309)
Q Consensus 182 ~p~~~p~~~~~~~~~~~~~~~~~~sgD~npiH~d~~~A~~~G~~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf 261 (309)
+|.+.|+++.+..+..|++.|||+|||+||||+||++|+++||+.+|+||||++++..+.+...+ +++.+..+++||
T Consensus 147 ~p~r~pd~~v~~~ts~DqaAlyrlsgD~NPLHiDPe~A~~agFetpilHGlc~lg~~~riv~a~~---~~a~y~~~kvrF 223 (272)
T KOG1206|consen 147 VPHRDPDAVVERFTSEDQAALYRLSGDHNPLHIDPESALEAGFETPILHGLCTLGFSARIVGAQF---PPAVYKAQKVRF 223 (272)
T ss_pred CCCcCcchheeecchhhHHHHHHhcCCCCccccCHHHHHhcCCCCchhhhHHHhhhhHHHHHHhc---Cchhhheeeeee
Confidence 89999999999999999999999999999999999999999999999999999999999998775 477899999999
Q ss_pred CcCCCCCCEEEEEEEEECcEEEEEEEEecCCceEEEE-EEEEEe
Q 021701 262 LLHVYPGETLVTEMWLQGLRVIYQVKVKERNRSALSG-FVDVHR 304 (309)
Q Consensus 262 ~~pv~~gdtl~~~~~~~~~~v~~~~~~~~~g~~v~~g-~a~v~~ 304 (309)
++||+|||+|.+..|+.+..++|+..+...|+.|+++ .+.+.+
T Consensus 224 ~spV~pGdtll~~~wK~g~r~~fqt~vv~t~~~v~sna~iDl~~ 267 (272)
T KOG1206|consen 224 SSPVGPGDTLLVLVWKQGLRITFQTYVVETGKIVISNAVIDLEA 267 (272)
T ss_pred cCCCCCchhHHHHHHhhhceeEEEEEEEEEEEEEeeccEEehhh
Confidence 9999999999999999999999998877788999884 444443
No 3
>cd03448 HDE_HSD HDE_HSD The R-hydratase-like hot dog fold of the 17-beta-hydroxysteriod dehydrogenase (HSD), and Hydratase-Dehydrogenase-Epimerase (HDE) proteins. Other enzymes with this fold include MaoC dehydratase, and the fatty acid synthase beta subunit.
Probab=99.94 E-value=2.5e-26 Score=182.19 Aligned_cols=120 Identities=59% Similarity=0.910 Sum_probs=108.3
Q ss_pred CCCCCceEEeecCHHHHHHHHHHhCCCCCCCCCHHHHhhcCCCCceechHhHHHHHHHHHHHhhhcCCCccEEEEEEEEC
Q 021701 183 PKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFL 262 (309)
Q Consensus 183 p~~~p~~~~~~~~~~~~~~~~~~sgD~npiH~d~~~A~~~G~~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~ 262 (309)
|+++|+.+....+..++..+|++|||+||||+|+++|+..||+++|+|||++++++.+++.+++.++.+..+..+++||.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~SgD~nPiH~d~e~A~~~g~~~~iahG~~t~a~~~~~~~~~~~~~~~~~~~~~~~rF~ 80 (122)
T cd03448 1 PDRAPDAVVEIPTSPDQALLYRLSGDYNPLHIDPAFAKAAGFPRPILHGLCTYGFAARAVLEAFADGDPARFKAIKVRFS 80 (122)
T ss_pred CCCCCCEEEEecCCcChHHHHHHhCCCCccccCHHHHHHcCCCCceehhHHHHHHHHHHHHHHhcCCCcceeEEEEEEEc
Confidence 56789999999999999999999999999999999999999999999999999999998888876777788899999999
Q ss_pred cCCCCCCEEEEEEEEECcEEEEEEEEecCCceEEEE-EEEE
Q 021701 263 LHVYPGETLVTEMWLQGLRVIYQVKVKERNRSALSG-FVDV 302 (309)
Q Consensus 263 ~pv~~gdtl~~~~~~~~~~v~~~~~~~~~g~~v~~g-~a~v 302 (309)
+|||+||+|++++++.++.+.|+++++++|+++++| .+++
T Consensus 81 ~PV~~gDtl~~~~~~~~~~v~~~~~~~~~g~~v~~g~~~~~ 121 (122)
T cd03448 81 SPVFPGETLRTEMWKEGNRVIFQTKVVERDVVVLSNGAALL 121 (122)
T ss_pred CCccCCCEEEEEEEEeCCEEEEEEEEccCCcEEEECCEEec
Confidence 999999999999999888889998876788988884 5543
No 4
>cd03447 FAS_MaoC FAS_MaoC, the MaoC-like hot dog fold of the fatty acid synthase, beta subunit. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and 17-beta-hydroxysteriod dehydrogenase (HSD).
Probab=99.94 E-value=1.4e-25 Score=178.94 Aligned_cols=117 Identities=24% Similarity=0.328 Sum_probs=102.7
Q ss_pred eEEeecCHHHHHHHHHHhCCCCCCCCCHHHHhhcCCCCceechHhHHHHHHHHHHHhhhcCCCccEEEEEEEECcCCCCC
Q 021701 189 AVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPG 268 (309)
Q Consensus 189 ~~~~~~~~~~~~~~~~~sgD~npiH~d~~~A~~~G~~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~pv~~g 268 (309)
......++.|+..|+++|||+||||+|+++|+..||+++|+||||+++++.+++..++.+++...+.++++||++||++|
T Consensus 5 ~~~~~~t~~d~~~fa~lsGD~nPiH~D~~~A~~~g~~~~iahG~l~~~~~~~~~~~~~~~~~~~~~~~~~~rf~~PV~~g 84 (126)
T cd03447 5 ASLTITAPASNEPYARVSGDFNPIHVSRVFASYAGLPGTITHGMYTSAAVRALVETWAADNDRSRVRSFTASFVGMVLPN 84 (126)
T ss_pred ceEEEEChHHHHHHHHHhCCCCccCCCHHHHHHcCCCCCeechhHHHHHHHHHHHHhccCCCcceEEEEEEEEcccCcCC
Confidence 34567889999999999999999999999999999999999999999999988877654456777888999999999999
Q ss_pred CEEEEEEEEE---CcEEEEEEE-EecC-CceEEEEEEEEEec
Q 021701 269 ETLVTEMWLQ---GLRVIYQVK-VKER-NRSALSGFVDVHRL 305 (309)
Q Consensus 269 dtl~~~~~~~---~~~v~~~~~-~~~~-g~~v~~g~a~v~~p 305 (309)
|+|++++++. .+.+.++++ .||+ |++|++|++++.+|
T Consensus 85 dtl~~~~~v~~~~~~~~~~~~~~~nq~~g~~V~~g~~~v~~p 126 (126)
T cd03447 85 DELEVRLEHVGMVDGRKVIKVEARNEETGELVLRGEAEVEQP 126 (126)
T ss_pred CEEEEEEEEEEEeCCeEEEEEEEEECCCCCEEEEEEEEEeCC
Confidence 9999998873 455666665 4888 99999999999987
No 5
>PF13452 MaoC_dehydrat_N: N-terminal half of MaoC dehydratase; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1S9C_K 3OML_A 3KHP_A.
Probab=99.93 E-value=1.4e-25 Score=180.67 Aligned_cols=129 Identities=27% Similarity=0.457 Sum_probs=99.8
Q ss_pred hhcCCCCCCeeEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCeeeeecccCcCCCCCCCCCCCCCCC
Q 021701 11 LLLSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDP 90 (309)
Q Consensus 11 ~~iG~~~~~~~~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~ 90 (309)
++||+++++..+.|++++|++||+++| +.||+|.++..+ ...+|++++|||+|++++.+.. . . ..+.+++|+
T Consensus 1 ~~iG~~~~~~~~~v~~~~i~~ya~avg--~~~p~~~d~~~a--~~~~~~~~~apPt~~~~~~~~~--~-~-~~~~~~~~~ 72 (132)
T PF13452_consen 1 AWIGREFEPVTYTVTRRDIRRYALAVG--DPNPLYLDEEYA--RAAGHGGLIAPPTFAVVLAWPA--P-A-MFPDLGFDL 72 (132)
T ss_dssp -GTT-B-E-EEEEE-HHHHHHHHHHTT---CTTHHHHCTSS----TTSTT-B--GGGHHHHHHHC--C-G-GCGCCSS-G
T ss_pred CCCccEeCCeeEEECHHHHHHHHHHhC--cCCccccCHhHh--hccCCCCcccCHHHHhhhhccc--c-e-eeecCCCCh
Confidence 379999999999999999999999999 689988777665 5568999999999999888764 1 1 125668999
Q ss_pred ceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEc---CCeEEEEEEEEEEECCCCcEEEEE
Q 021701 91 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDK---GKAAILEIETKSYNAESGELLCMN 148 (309)
Q Consensus 91 ~~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k---~~G~~v~~~~~~~~~~~Ge~v~~~ 148 (309)
.++||++|+++||+||++||+|+++++|.++++| |++.++++++++ .|++|++|+++
T Consensus 73 ~~~vh~~~~~~~h~Pl~~Gd~l~~~~~v~~v~~k~g~G~~~~v~~~~~~-~~~~Ge~v~t~ 132 (132)
T PF13452_consen 73 TRLVHGEQDIEFHRPLRPGDTLTATSRVTDVYDKRGAGKGVFVTVETEY-TDQDGELVATQ 132 (132)
T ss_dssp GGEEEEEEEEEESS--BSSEEEEEEEEEEEEEEES-TTSEEEEEEEEEE-E-CTTEEEEE-
T ss_pred hhEEecCcEEEEeCCCCCCCEEEEEEEEEEEEEecCCCCEEEEEEEEEE-ECCCCCEEEeC
Confidence 9999999999999999999999999999999999 367899999996 58999999985
No 6
>PRK13691 (3R)-hydroxyacyl-ACP dehydratase subunit HadC; Provisional
Probab=99.91 E-value=1.9e-23 Score=174.06 Aligned_cols=146 Identities=13% Similarity=0.091 Sum_probs=120.8
Q ss_pred CCCChhhhcCCCCCCe-eEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCeeeeecccCcCCCCC-CC
Q 021701 5 SGINPELLLSQKLPEK-TFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGA-ID 82 (309)
Q Consensus 5 m~~d~~~~iG~~~~~~-~~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~-~~ 82 (309)
|++|.+ .||++|++. .+++|+++|++||.++| |.||+|.|+..+ +.++|++++|||+|+.++.... ... +.
T Consensus 1 ~~~~~~-~~g~~~~~~~~~~Vt~~~I~~FA~~~G--D~nPlH~D~eyA--~~s~fg~~IApgt~~~~~~~~~--~~~~~~ 73 (166)
T PRK13691 1 MALKTD-IRGMVWRYPDYFVVGREQIRQFARAVK--CDHPAFFSEDAA--AELGYDALVAPLTFVTIFAKYV--QLDFFR 73 (166)
T ss_pred CCCChh-hCccCcCCCCCeEECHHHHHHHHHHHC--CCCCcccCHHHH--HhCCCCCcccCHHHHHHHHHHh--cccccc
Confidence 789986 999999976 46999999999999999 799999877655 7789999999999986654332 111 12
Q ss_pred CCCCCCCCceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEeccC
Q 021701 83 LPGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAG 158 (309)
Q Consensus 83 ~~~~~~~~~~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg~~ 158 (309)
...++++..+++|++|+++|++|+++||+|+++.+|.++.+++.+.+++++.++ .||+|++|++...+++.|...
T Consensus 74 ~~~~g~~~~~~v~~~q~~~f~rPV~~GDtL~~~~~V~~~~~~~~~g~V~~~~~~-~NQ~Ge~V~~~~~~~~~~~~~ 148 (166)
T PRK13691 74 HVDVGMETMQIVQVDQRFVFHKPVLAGDKLWARMDIHSVDERFGADIVVTRNVC-TNDDGELVMEAYTTLMGQQGD 148 (166)
T ss_pred ccccCCCcceeeeeeeEEEEeCCcCCCCEEEEEEEEEEEEEcCCCcEEEEEEEE-ECCCCCEEEEEEEEEEEecCC
Confidence 223467778889999999999999999999999999999876544568888886 599999999999999998654
No 7
>cd03453 SAV4209_like SAV4209_like. Similar in sequence to the Streptomyces avermitilis SAV4209 protein, with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=99.90 E-value=8e-23 Score=163.59 Aligned_cols=110 Identities=26% Similarity=0.328 Sum_probs=97.2
Q ss_pred eecCHHHHHHHHHHhCCCCCCCCCHHHHhhcCCCCceechHhHHHHHHHHHHHhhhcCCCccEEEEEEEECcCCCCCCEE
Q 021701 192 EDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETL 271 (309)
Q Consensus 192 ~~~~~~~~~~~~~~sgD~npiH~d~~~A~~~G~~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~pv~~gdtl 271 (309)
...+..++..|++++||+||||+|+++|+..||+++|+||+++++++.+++.+++ +++..+.++++||.+|||+||+|
T Consensus 10 ~~vt~~~i~~fa~~sgD~npiH~D~~~A~~~g~~~~i~~G~~~~~~~~~~~~~~~--~~~~~i~~~~~rf~~Pv~~Gdtl 87 (127)
T cd03453 10 PPVSRADLVRYAGASGDFNPIHYDEDFAKKVGLPGVIAHGMLTMGLLGRLVTDWV--GDPGRVVSFGVRFTKPVPVPDTL 87 (127)
T ss_pred eecCHHHHHHHHHhhcCCCccccCHHHHHHcCCCCcEecHHHHHHHHHHHHHHHc--CCccceEEEEEEECCcCcCCCEE
Confidence 3578999999999999999999999999999999999999999999999888875 24667788999999999999999
Q ss_pred EEEEEEE-----C--cEEEEEEE-EecCCceEEEEEEEEE
Q 021701 272 VTEMWLQ-----G--LRVIYQVK-VKERNRSALSGFVDVH 303 (309)
Q Consensus 272 ~~~~~~~-----~--~~v~~~~~-~~~~g~~v~~g~a~v~ 303 (309)
+++.++. + +.++++++ .||+|+.|++|+++|+
T Consensus 88 ~~~~~v~~~~~~~~~~~v~~~~~~~nq~g~~v~~g~a~v~ 127 (127)
T cd03453 88 TCTGIVVEKTVADGEDALTVTVDATDQAGGKKVLGRAIVA 127 (127)
T ss_pred EEEEEEEEEEecCCCcEEEEEEEEEEcCCCEEEEEEEEEC
Confidence 9998862 1 46778877 4999999999999874
No 8
>cd03455 SAV4209 SAV4209 is a Streptomyces avermitilis protein with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The alpha- and gamma-proteobacterial members of this CD have, in addition to a hot dog fold, an N-terminal extension.
Probab=99.90 E-value=1e-22 Score=162.03 Aligned_cols=109 Identities=18% Similarity=0.234 Sum_probs=96.4
Q ss_pred ecCHHHHHHHHHHhCCCCCCCCCHHHHhhcCCCCceechHhHHHHHHHHHHHhhhcCCCccEEEEEEEECcCCCCCCEEE
Q 021701 193 DYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETLV 272 (309)
Q Consensus 193 ~~~~~~~~~~~~~sgD~npiH~d~~~A~~~G~~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~pv~~gdtl~ 272 (309)
..+..++..|+++|||+||||+|+++|++.||+++|+|||++++++.+++.+++ +++..+.++++||.+||++||+|+
T Consensus 10 ~vt~~~i~~fa~~s~D~~piH~D~~~A~~~g~~~~ia~G~~~~~~~~~~~~~~~--~~~~~~~~~~~rf~~pv~~Gdtl~ 87 (123)
T cd03455 10 PPDPTLLFRYSAATRDFHRIHHDRDYARAVGYPDLYVNGPTLAGLVIRYVTDWA--GPDARVKSFAFRLGAPLYAGDTLR 87 (123)
T ss_pred cCCHHHHHHHHhhcCCCCcccCCHHHHHhcCCCceEEEHHHHHHHHHHHHHHcc--CCcceEEEEEEEeeccccCCCEEE
Confidence 467899999999999999999999999999999999999999999999888775 345788889999999999999999
Q ss_pred EEEEEEC---c-EEEEEEEE-ecCCceEEEEEEEEE
Q 021701 273 TEMWLQG---L-RVIYQVKV-KERNRSALSGFVDVH 303 (309)
Q Consensus 273 ~~~~~~~---~-~v~~~~~~-~~~g~~v~~g~a~v~ 303 (309)
++.++.+ + .+.+++++ ||+|+.|++|+++++
T Consensus 88 ~~~~v~~~~~~~~v~~~~~~~nq~G~~v~~g~a~v~ 123 (123)
T cd03455 88 FGGRVTAKRDDEVVTVELWARNSEGDHVMAGTATVA 123 (123)
T ss_pred EEEEEEeeccCcEEEEEEEEEcCCCCEEEeEEEEEC
Confidence 9998732 2 66777774 899999999999874
No 9
>COG3777 Uncharacterized conserved protein [Function unknown]
Probab=99.90 E-value=2e-23 Score=177.18 Aligned_cols=258 Identities=18% Similarity=0.118 Sum_probs=189.0
Q ss_pred hhhhcCCCCCCeeEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCeeeeecccCcCCCCC--CCCCCC
Q 021701 9 PELLLSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGA--IDLPGL 86 (309)
Q Consensus 9 ~~~~iG~~~~~~~~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~--~~~~~~ 86 (309)
+.+|||+...... .+++.++..+|.-.+ +..|. .++-.|++. |..+|.-..-++.++ +.. .-+|
T Consensus 6 ~k~wIgR~~~~~~-~~t~s~~~r~~a~~~--~~~~t---~l~p~~H~l----ff~~p~~~~~lg~dg--hp~rg~flp-- 71 (273)
T COG3777 6 LKDWIGRDELTHH-RLTASDVLRCAALFV--SEAPT---HLQPGWHFL----FFPPPVEKADLGPDG--HPARGSFLP-- 71 (273)
T ss_pred hhhhhccccchhh-hccccccceehhhcC--CCccc---ccCcceeee----ecCCchhhhcCCCCC--CcCccCCCC--
Confidence 5679999987765 889999999998888 34443 367777774 444443333477776 543 1223
Q ss_pred CCCCceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcC--Ce--EEEEEEEEEEECCCCcEEEEEEEEEEEeccCCCCC
Q 021701 87 QHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKG--KA--AILEIETKSYNAESGELLCMNRMTAFLRGAGGFSN 162 (309)
Q Consensus 87 ~~~~~~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~--~G--~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg~~~~~~ 162 (309)
+++..+.++++.+++||+||+.|++.++..+|..|++|. +| .++++..+ + .++|++..+++.+++|++...
T Consensus 72 p~~~~RRmWa~G~l~f~~pl~lgqe~t~~e~Iq~i~ek~g~~g~ltfvT~~h~-~-~~~~~l~l~Err~ivY~n~~~--- 146 (273)
T COG3777 72 PLRYRRRMWAGGELVFHLPLRLGQEYTCHETIQYIEEKHGRSGELTFVTVPHV-Y-SSPGQLCLFERRTIVYTNAPA--- 146 (273)
T ss_pred CcchhhhhhccceEEEecceecCceeehhHHHHHHHHhcccccceeEEeccce-e-ccCcceeeeeeeeEEEecCCC---
Confidence 788999999999999999999999999999999999984 45 67777766 4 479999999999999997641
Q ss_pred CCCCCCCCCCCCCCcccCCCCCCCCceEEeecCHHHHHHHHHHhCCCCCCCCCHHHHhh-cCCCCceechHhHHHHHHHH
Q 021701 163 SSQPFSYSKYQTIPVSVVKIPKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKA-AGFSRPILHGLCTMGFAVRA 241 (309)
Q Consensus 163 ~~~p~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~sgD~npiH~d~~~A~~-~G~~~~i~hG~~~~~~~~~~ 241 (309)
..|+. ..+..+|...-. ..-..++..+.+|.+++.|.|.||+|..||+. .|||++|+||++...++.++
T Consensus 147 -s~p~~--------~~s~~~p~~~w~-~~~tptpvllfrYsaltfN~HrIHyD~~Yat~vEgYpgLVvhGPl~atlll~~ 216 (273)
T COG3777 147 -SKPAV--------KMSVAEPNGKWL-KNFTPTPVLLFRYSALTFNGHRIHYDAPYATYVEGYPGLVVHGPLIATLLLRA 216 (273)
T ss_pred -CCccc--------cCCCCCCCCchh-hcCCCCchheeehhhhccCceeeeccCcceeeccCCCCceecchHHHHHHHHH
Confidence 11211 011122221100 01123456677899999999999999999987 89999999999999998887
Q ss_pred HHHhhhcCCCccEEEEEEEECcCCCCCCEEEEEEEEECc-EEEEEEEEecCCceEEEEEE
Q 021701 242 IIKFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWLQGL-RVIYQVKVKERNRSALSGFV 300 (309)
Q Consensus 242 ~~~~~~~g~~~~~~~~~~rf~~pv~~gdtl~~~~~~~~~-~v~~~~~~~~~g~~v~~g~a 300 (309)
+... .+..++++++|-.+|.|+++++++.....++ .+...+ ++.+|.+.+.|.+
T Consensus 217 ~~~~----~pq~~~Rf~fR~L~p~f~~~~lti~~~l~~~g~~~~w~-~~~~~pv~mrarV 271 (273)
T COG3777 217 FQPF----LPQPIRRFRFRNLSPAFPNETLTICGSLSGSGGAELWT-IRGDGPVAMRARV 271 (273)
T ss_pred hhhh----ccccchheeccccccccCCCCeeEeeEecCCCceEEEE-ecCCcchhheeee
Confidence 7543 2344889999999999999999999887653 344333 3556666666654
No 10
>PRK13692 (3R)-hydroxyacyl-ACP dehydratase subunit HadA; Provisional
Probab=99.87 E-value=2.1e-21 Score=160.86 Aligned_cols=145 Identities=14% Similarity=0.198 Sum_probs=121.9
Q ss_pred CCCChhhhcCCCCCCe-eEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCeeeeecccCcCCCCC-CC
Q 021701 5 SGINPELLLSQKLPEK-TFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGA-ID 82 (309)
Q Consensus 5 m~~d~~~~iG~~~~~~-~~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~-~~ 82 (309)
|++|.+ .+|.++... .+++|+++|+.||.++| |+||+|.|+..+ +..+|++.+|||+|..++++.. ... ..
T Consensus 1 ~~~~~~-~vG~~~~~~~~~tvt~~dI~~FA~~~G--D~nPlh~D~e~A--~~~~fg~~iA~~~~~~~~gl~~--~~~~~~ 73 (159)
T PRK13692 1 MALSAD-IVGMHYRYPDHYEVEREKIREYAVAVQ--NDDAAYFEEDAA--AELGYKGLLAPLTFICVFGYKA--QSAFFK 73 (159)
T ss_pred CCCChh-HceeEcCCCCceEeCHHHHHHHHHHHC--CCCCCccCHHHH--HhcCCCCcccChHHHHHhhhhh--hhhhhh
Confidence 788875 999999985 78999999999999999 799999877654 6679999999999987776653 211 22
Q ss_pred CCCCCCCCceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEecc
Q 021701 83 LPGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGA 157 (309)
Q Consensus 83 ~~~~~~~~~~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg~ 157 (309)
..+++++..+.+|++|+++|++|+++||+|+++.+|.++++++...+++++.++ .||+|++|++.+.++++|+.
T Consensus 74 ~~~l~~~~~~~~~~~q~~~f~~PV~~GDtL~~~~eV~~~~~~~~~giv~~~~~v-~Nq~Ge~V~~~~~~~~~r~~ 147 (159)
T PRK13692 74 HANIAVADAQIVQVDQVLKFEKPIVAGDKLYCDVYVDSVREAHGTQIIVTKNIV-TNEEGDVVQETYTTLAGRAG 147 (159)
T ss_pred cccCCCCccceEeeeeEEEEeCCccCCCEEEEEEEEEEEEEcCCceEEEEEEEE-EcCCCCEEEEEEEEEEEecC
Confidence 355677778999999999999999999999999999998766533578888886 48999999999999999864
No 11
>COG2030 MaoC Acyl dehydratase [Lipid metabolism]
Probab=99.86 E-value=2.9e-21 Score=160.25 Aligned_cols=125 Identities=26% Similarity=0.378 Sum_probs=102.6
Q ss_pred CCCCCCCceEEeecCHHHHHHHHHHhCCCCCCCCCHHHHhh-cCCCCceechHhHHHHHHHHHHHhhhcC-CCccEEEEE
Q 021701 181 KIPKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKA-AGFSRPILHGLCTMGFAVRAIIKFICRG-DPNMVKNIF 258 (309)
Q Consensus 181 ~~p~~~p~~~~~~~~~~~~~~~~~~sgD~npiH~d~~~A~~-~G~~~~i~hG~~~~~~~~~~~~~~~~~g-~~~~~~~~~ 258 (309)
.++...+...+...++.|+..|++++||+||||+|+++|+. .+|+++|+||||+++++.+++..+...+ ...++...+
T Consensus 21 ~vG~~~~~~~~~~~t~~d~~~fa~~tgD~qpiH~D~e~A~~~~~fg~~iahG~~t~a~~~~~~~~~~~~~~~~~~~g~~~ 100 (159)
T COG2030 21 EVGQVFPHSPWRTVTEADIVLFAAVTGDPNPIHLDPEAAKKTSGFGGPIAHGMLTLALAMGLVVAALGDPSVGANLGGDE 100 (159)
T ss_pred cCCcEEecCCceEecHHHHHHHHHhcCCCCceecCHHHHhccCCCCCEehhHHHHHHHHHHHHHHhccCcceeeeccccc
Confidence 34433334445577899999999999999999999999999 6999999999999999998888765322 135777889
Q ss_pred EEECcCCCCCCEEEEEEEEEC-------cEEEEEEE-EecCCceEEEEEEEEEec
Q 021701 259 SRFLLHVYPGETLVTEMWLQG-------LRVIYQVK-VKERNRSALSGFVDVHRL 305 (309)
Q Consensus 259 ~rf~~pv~~gdtl~~~~~~~~-------~~v~~~~~-~~~~g~~v~~g~a~v~~p 305 (309)
+||.+||++||||+++.++.+ |.+.++.. .||+|+.++..++.+..+
T Consensus 101 vRF~~PV~~Gdtl~~~~~v~~~~~~~~~G~v~~~~~~~~~~g~~v~~~~~~~~~~ 155 (159)
T COG2030 101 VRFVKPVFPGDTLRARVEVLDKRPSKSRGLVTLRLETVNQEGELVLTLEATVLVL 155 (159)
T ss_pred eEecCCCCCCCEEEEEEEEEEeeecCCceEEEEEEEEEccCCcEEEEEEEeEeEe
Confidence 999999999999999999742 67777776 599999999988876654
No 12
>PRK13693 (3R)-hydroxyacyl-ACP dehydratase subunit HadB; Provisional
Probab=99.86 E-value=2.8e-20 Score=151.47 Aligned_cols=110 Identities=25% Similarity=0.340 Sum_probs=88.9
Q ss_pred ecCHHHHHHHHHHhCCCCCCCCCHHHHhhcCCCCceechHhHHHHHHHHHHHhhhcCCCccEEEEEEEECcCCCC-CC--
Q 021701 193 DYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYP-GE-- 269 (309)
Q Consensus 193 ~~~~~~~~~~~~~sgD~npiH~d~~~A~~~G~~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~pv~~-gd-- 269 (309)
..+..|+.+|+++|||+||||+|+++|+..||+++|+|||++++++.+++.+|+ +++..+.++++||.+|||+ ||
T Consensus 21 tvt~~di~~FA~~sgD~nPiH~D~~~A~~~g~~~~iahG~~~~a~~~~~~~~~~--~~~~~~~~~~~rF~~pv~~g~D~~ 98 (142)
T PRK13693 21 PLTRQDLVNYAGVSGDLNPIHWDDEIAKVVGLDTAIAHGMLTMGLGGGYVTSWV--GDPGAVTEYNVRFTAVVPVPNDGK 98 (142)
T ss_pred eeCHHHHHHHHHHhCCCCccccCHHHHHhcCCCCcEecHHHHHHHHHHHHHHhc--CCCcceEEEEEEecccEECCCCcc
Confidence 578999999999999999999999999999999999999999999999888764 3455667899999999995 44
Q ss_pred --EEEEEEEEE-----CcEEEEEEEEecCCce-EEEEEEEEEe
Q 021701 270 --TLVTEMWLQ-----GLRVIYQVKVKERNRS-ALSGFVDVHR 304 (309)
Q Consensus 270 --tl~~~~~~~-----~~~v~~~~~~~~~g~~-v~~g~a~v~~ 304 (309)
+|+++.++. .+.+++.+++.++|+. ..+|++.+.+
T Consensus 99 ~~~l~~~~~V~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 141 (142)
T PRK13693 99 GAELVFNGRVKSVDPESKSVTIALTATTGGKKIFGRAIASAKL 141 (142)
T ss_pred ceEEEEEEEEEEeccCCcEEEEEEEEEECCcEEEEEEEEEEEc
Confidence 888877763 2467788776445544 4456666654
No 13
>cd03452 MaoC_C MaoC_C The C-terminal hot dog fold of the MaoC (monoamine oxidase C) dehydratase regulatory protein. Orthologs of MaoC include PaaZ [Escherichia coli] and PaaN [Pseudomonas putida], which are putative ring-opening enzymes involved in phenylacetic acid degradation. The C-terminal domain of MaoC has sequence similarity to (R)-specific enoyl-CoA hydratase,Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. MaoC also has an N-terminal PutA domain like that found in the E. coli PutA proline dehydrogenase and other members of the aldehyde dehydrogenase family.
Probab=99.85 E-value=5e-21 Score=156.13 Aligned_cols=110 Identities=22% Similarity=0.210 Sum_probs=91.8
Q ss_pred ecCHHHHHHHHHHhCCCCCCCCCHHHHhhcCCCCceechHhHHHHHHHHHHHhhhcCCCccE---EEEEEEECcCCCCCC
Q 021701 193 DYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMV---KNIFSRFLLHVYPGE 269 (309)
Q Consensus 193 ~~~~~~~~~~~~~sgD~npiH~d~~~A~~~G~~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~---~~~~~rf~~pv~~gd 269 (309)
..+..++..|++++||+||||+|++||++.+|+++|+||+++++++.+++..+. +...+ ...++||.+||++||
T Consensus 17 tvt~~~i~~Fa~~tgD~nPiH~D~e~A~~~~fg~~ia~G~l~~s~~~~l~~~~~---~~~~~~~~g~~~~rf~~PV~~GD 93 (142)
T cd03452 17 TVTEADIVNFACLTGDHFYAHMDEIAAKASFFGKRVAHGYFVLSAAAGLFVDPA---PGPVLANYGLENLRFLEPVYPGD 93 (142)
T ss_pred EEcHHHHHHHHHhhCCCCccccCHHHHhhCCCCCeeecHHHHHHHHhhhCccCC---cccEEEEeccceEEECCCCCCCC
Confidence 467899999999999999999999999999999999999999999988765442 22332 345999999999999
Q ss_pred EEEEEEEEE------C---cEEEEEEE-EecCCceEEEEEEEEEec
Q 021701 270 TLVTEMWLQ------G---LRVIYQVK-VKERNRSALSGFVDVHRL 305 (309)
Q Consensus 270 tl~~~~~~~------~---~~v~~~~~-~~~~g~~v~~g~a~v~~p 305 (309)
+|+++.++. + +.+++++. .||+|++|++|+..+..+
T Consensus 94 tl~~~~~V~~~~~~~~~~~~~v~~~~~~~nq~g~~V~~~~~~~~~~ 139 (142)
T cd03452 94 TIQVRLTCKRKIPRDGQDYGVVRWDAEVTNQNGELVASYDILTLVA 139 (142)
T ss_pred EEEEEEEEEEEeecCCCCcEEEEEEEEEEecCCCEEEEEEehHeeE
Confidence 999988762 1 36778777 499999999999876654
No 14
>cd03449 R_hydratase (R)-hydratase [(R)-specific enoyl-CoA hydratase] catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. (R)-hydratase contains a hot-dog fold similar to those of thioesterase II, and beta-hydroxydecanoyl-ACP dehydratase, MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit. The active site lies within a substrate-binding tunnel formed by the (R)-hydratase homodimer. A subset of the bacterial (R)-hydratases contain a C-terminal phosphotransacetylase (PTA) domain.
Probab=99.85 E-value=2.6e-20 Score=148.66 Aligned_cols=110 Identities=25% Similarity=0.350 Sum_probs=95.5
Q ss_pred ecCHHHHHHHHHHhCCCCCCCCCHHHHhhcCCCCceechHhHHHHHHHHHHHhhhcCCCccEEEEEEEECcCCCCCCEEE
Q 021701 193 DYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETLV 272 (309)
Q Consensus 193 ~~~~~~~~~~~~~sgD~npiH~d~~~A~~~G~~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~pv~~gdtl~ 272 (309)
..+..++..|++++||+||||+|++||+..||+++|+||+++++++.+++..+ .+++.......++||.+||++||+|+
T Consensus 12 tv~~~~~~~fa~~~gd~npiH~D~~~A~~~g~~~~i~~g~~~~~~~~~~~~~~-~~g~~~~~~~~~~~f~~Pv~~gd~l~ 90 (128)
T cd03449 12 TITEEDVELFAELSGDFNPIHLDEEYAKKTRFGGRIAHGMLTASLISAVLGTL-LPGPGTIYLSQSLRFLRPVFIGDTVT 90 (128)
T ss_pred EEcHHHHHHHHHHhCCCCCccCCHHHHhhCCCCCceecHHHHHHHHHHHHhcc-CCCceEEEEEEEEEECCCccCCCEEE
Confidence 57789999999999999999999999999999999999999999988777665 34555566788999999999999999
Q ss_pred EEEEEE---C--cEEEEEEEE-ecCCceEEEEEEEEE
Q 021701 273 TEMWLQ---G--LRVIYQVKV-KERNRSALSGFVDVH 303 (309)
Q Consensus 273 ~~~~~~---~--~~v~~~~~~-~~~g~~v~~g~a~v~ 303 (309)
++.++. + +.+.+++++ ||+|+++++|++++.
T Consensus 91 ~~~~v~~~~~~~~~v~~~~~~~~~~g~~v~~g~~~~~ 127 (128)
T cd03449 91 ATVTVTEKREDKKRVTLETVCTNQNGEVVIEGEAVVL 127 (128)
T ss_pred EEEEEEEEecCCCEEEEEEEEEeCCCCEEEEEEEEEe
Confidence 998863 3 577787774 888999999998875
No 15
>cd03441 R_hydratase_like (R)-hydratase [(R)-specific enoyl-CoA hydratase]. Catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. The structure of the monomer includes a five-strand antiparallel beta-sheet wrapped around a central alpha helix, referred to as a hot dog fold. The active site lies within a substrate-binding tunnel formed by the homodimer. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit.
Probab=99.85 E-value=3.7e-20 Score=147.43 Aligned_cols=111 Identities=36% Similarity=0.500 Sum_probs=96.5
Q ss_pred eecCHHHHHHHHHHhCCCCCCCCCHHHHhhcCCCCceechHhHHHHHHHHHHHhhhcCCCccEEEEEEEECcCCCCCCEE
Q 021701 192 EDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETL 271 (309)
Q Consensus 192 ~~~~~~~~~~~~~~sgD~npiH~d~~~A~~~G~~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~pv~~gdtl 271 (309)
...++.++..|++++||+||||+|+++|+..||+++|+||+++++++.+++.+++..++...+..+++||.+||++||+|
T Consensus 8 ~~~~~~~~~~fa~~~gd~npiH~d~~~A~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~Pv~~Gd~l 87 (127)
T cd03441 8 RTVTEADIALFARLSGDPNPIHVDPEYAKAAGFGGRIAHGMLTLSLASGLLVQWLPGTDGANLGSQSVRFLAPVFPGDTL 87 (127)
T ss_pred eEcCHHHHHHHHHHhCCCCccccCHHHHHhCCCCCceechHHHHHHHHhhhhhhccCcccceeEEeEEEEeCCcCCCCEE
Confidence 45678999999999999999999999999999999999999999999988887753225667888999999999999999
Q ss_pred EEEEEEEC-------cEEEEEEE-EecCCceEEEEEEEE
Q 021701 272 VTEMWLQG-------LRVIYQVK-VKERNRSALSGFVDV 302 (309)
Q Consensus 272 ~~~~~~~~-------~~v~~~~~-~~~~g~~v~~g~a~v 302 (309)
+++.++.+ +.+.++++ .||+|+++++|++.+
T Consensus 88 ~~~~~v~~~~~~~~~~~v~~~~~~~n~~g~~v~~g~~~~ 126 (127)
T cd03441 88 RVEVEVLGKRPSKGRGVVTVRTEARNQGGEVVLSGEATV 126 (127)
T ss_pred EEEEEEEEeeccCCCcEEEEEEEEEeCCCCEEEEEEEEe
Confidence 99998731 46777776 488999999999876
No 16
>cd03451 FkbR2 FkbR2 is a Streptomyces hygroscopicus protein with a hot dog fold that belongs to a conserved family of proteins found in prokaryotes and archaea but not in eukaryotes. FkbR2 has sequence similarity to (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The function of FkbR2 is unknown.
Probab=99.84 E-value=2.3e-20 Score=152.71 Aligned_cols=115 Identities=20% Similarity=0.141 Sum_probs=94.9
Q ss_pred ecCHHHHHHHHHHhCCCCCCCCCHHHHhhcCCCCceechHhHHHHHHHHHHHhhhcCCCccEEEEEEEECcCCCCCCEEE
Q 021701 193 DYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETLV 272 (309)
Q Consensus 193 ~~~~~~~~~~~~~sgD~npiH~d~~~A~~~G~~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~pv~~gdtl~ 272 (309)
..+..++..|++++||+||||+|+++|+..+|+++|+||+++++++.+++..++..+....+...+++|++||++||+|+
T Consensus 20 tvt~~~i~~fa~~~gd~~piH~D~~~a~~~~~~~~ia~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~pv~~GDtl~ 99 (146)
T cd03451 20 TVTEADNVLFTLLTMNTAPLHFDAAYAAKTEFGRRLVNSLFTLSLALGLSVNDTSLTAVANLGYDEVRFPAPVFHGDTLY 99 (146)
T ss_pred EEcHHHHHHHHHhhCCCCccccCHHHHhhCCCCCccccHHhHHHHHhhheehhccccceeccCccEEEecCCCCCCCEEE
Confidence 46799999999999999999999999999999999999999999987665554321122234445899999999999999
Q ss_pred EEEEEE----C------cEEEEEEEE-ecCCceEEEEEEEEEeccC
Q 021701 273 TEMWLQ----G------LRVIYQVKV-KERNRSALSGFVDVHRLAS 307 (309)
Q Consensus 273 ~~~~~~----~------~~v~~~~~~-~~~g~~v~~g~a~v~~p~~ 307 (309)
++.++. . +.+.+++++ ||+|++|++|++++..|..
T Consensus 100 ~~~~v~~~~~~~~~~~~~~v~~~~~~~nq~g~~V~~~~~~~~~~~~ 145 (146)
T cd03451 100 AESEVLSKRESKSRPDAGIVTVRTVGYNQDGEPVLSFERTALVPKR 145 (146)
T ss_pred EEEEEEEEecCCCCCCCeEEEEEEEEECCCCCEEEEEEehhEEEcC
Confidence 987762 1 467788775 8999999999999988764
No 17
>PF01575 MaoC_dehydratas: MaoC like domain; InterPro: IPR002539 The C terminus of the MaoC protein is found to share similarity with a wide variety of enzymes. All these enzymes contain multiple domains. This domain is found in parts of two enzymes that have been assigned dehydratase activities. A deletion mutant of the C-terminal 271 amino acids in Q02207 from SWISSPROT abolished its 2-enoyl-CoA hydratase activity, suggesting that this region may be a hydratase enzyme []. The maoC gene is part of a operon with maoA which is involved in the synthesis of monoamine oxidase [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1PN4_C 1PN2_B 1S9C_K 3OML_A 1Q6W_B 2B3M_A 3K67_B ....
Probab=99.83 E-value=1.2e-20 Score=149.94 Aligned_cols=89 Identities=33% Similarity=0.557 Sum_probs=73.4
Q ss_pred EeecCHHHHHHHHHHhCCCCCCCCCHHHHhhcCCCCceechHhHHHHHHHHHHHhhhcCCCccEEEEEEEECcCCCCCCE
Q 021701 191 FEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGET 270 (309)
Q Consensus 191 ~~~~~~~~~~~~~~~sgD~npiH~d~~~A~~~G~~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~pv~~gdt 270 (309)
....++.++..|+++|||+||||+|+++|+..||+++|+|||++++++.+++.+++.+.....+..+++||.+|||+||+
T Consensus 15 ~~tit~~~~~~fa~~sgD~nPiH~D~~~A~~~gf~~~ivhG~~~~a~~~~~~~~~~~~~~~~~~~~~~~rF~~PV~~gdt 94 (122)
T PF01575_consen 15 SRTITEADIRQFAALSGDFNPIHVDPEYARATGFGGPIVHGMLTLALASGLLGDWLGPNPPARLGRFNVRFRAPVFPGDT 94 (122)
T ss_dssp EEEEEHHHHHHHHHHHT---HHHH-HHHHHTSTTSSSB-BHHHHHHHHHHHHHHHHSTTECEEEEEEEEEESS--BTTEE
T ss_pred CEEECHHHHHHHHHhhCCCCcceecHHHHhhcCCCCEEEccHHHHHHHHHHHHHhccCccceEEEEEEEEEeccccCCCE
Confidence 34567899999999999999999999999999999999999999999999999887443467889999999999999999
Q ss_pred EEEEEEEEC
Q 021701 271 LVTEMWLQG 279 (309)
Q Consensus 271 l~~~~~~~~ 279 (309)
|++++++.+
T Consensus 95 l~~~~~v~~ 103 (122)
T PF01575_consen 95 LTAEVEVTE 103 (122)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 999998753
No 18
>cd03446 MaoC_like MoaC_like Similar to the MaoC (monoamine oxidase C) dehydratase regulatory protein but without the N-terminal PutA domain. This protein family has a hot-dog fold similar to that of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=99.82 E-value=2.8e-19 Score=145.23 Aligned_cols=109 Identities=28% Similarity=0.351 Sum_probs=89.5
Q ss_pred ecCHHHHHHHHHHhCCCCCCCCCHHHHhhcCCCCceechHhHHHHHHHHHHHhhhcCCCc----cEEEEEEEECcCCCCC
Q 021701 193 DYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPN----MVKNIFSRFLLHVYPG 268 (309)
Q Consensus 193 ~~~~~~~~~~~~~sgD~npiH~d~~~A~~~G~~~~i~hG~~~~~~~~~~~~~~~~~g~~~----~~~~~~~rf~~pv~~g 268 (309)
..+..++..|++++||+||||+|+++|+..||+++|+||+++++++.+++..+ .+... .+...+++|.+||++|
T Consensus 17 tvt~~~i~~fa~~~gD~np~H~D~~~A~~~~~~~~ia~G~~~~a~~~~~~~~~--~~~~~~~~~~~g~~~~~f~~pv~~G 94 (140)
T cd03446 17 TVTEADVVMFAGLSGDWNPIHTDAEYAKKTRFGERIAHGLLTLSIATGLLQRL--GVFERTVVAFYGIDNLRFLNPVFIG 94 (140)
T ss_pred EECHHHHHHHHHhhCCCcccccCHHHHccCCCCCceeccccHHHHHhhHhhhc--ccccceeeEEeccceEEEcCCCCCC
Confidence 46789999999999999999999999999999999999999999988776543 22211 2223489999999999
Q ss_pred CEEEEEEEEE---------CcEEEEEEE-EecCCceEEEEEEEEE
Q 021701 269 ETLVTEMWLQ---------GLRVIYQVK-VKERNRSALSGFVDVH 303 (309)
Q Consensus 269 dtl~~~~~~~---------~~~v~~~~~-~~~~g~~v~~g~a~v~ 303 (309)
|+|+++.++. .+.+++++. .||+|++|++|++++.
T Consensus 95 D~l~~~~~v~~~~~~~~~~~~~v~~~~~~~nq~g~~v~~~~~~~l 139 (140)
T cd03446 95 DTIRAEAEVVEKEEKDGEDAGVVTRRIEVVNQRGEVVQSGEMSLL 139 (140)
T ss_pred CEEEEEEEEEEecccCCCCceEEEEEEEEEcCCCCEEEEEEEeee
Confidence 9999998762 136777777 4899999999998864
No 19
>PRK08190 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated
Probab=99.81 E-value=3.8e-19 Score=171.26 Aligned_cols=116 Identities=21% Similarity=0.264 Sum_probs=101.4
Q ss_pred eecCHHHHHHHHHHhCCCCCCCCCHHHHhhcCCCCceechHhHHHHHHHHHHHhhhcCCCccEEEEEEEECcCCCCCCEE
Q 021701 192 EDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETL 271 (309)
Q Consensus 192 ~~~~~~~~~~~~~~sgD~npiH~d~~~A~~~G~~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~pv~~gdtl 271 (309)
...++.++..|++++||+||||+|++||+..||+++|+||+++++++.+++..+ +++.+..+..+++||.+|||+||||
T Consensus 24 rtvT~~di~~FA~lsGD~nPiH~D~e~Ak~sgfg~~IahG~l~~s~~~~l~~~~-~~g~~~~~~~~~~rF~~PV~~GDtl 102 (466)
T PRK08190 24 RTLTPDDIELFAAMSGDVNPAHLDAAYAASDGFHHVVAHGMWGGALISAVLGTR-LPGPGTIYLGQSLRFRRPVRIGDTL 102 (466)
T ss_pred EEecHHHHHHHHHHhCCCCCCCcCHHHHHhCCCCCceeCHHHHHHHHHHHHhhh-CCCcceEEEEEEEEEeCCcCCCCEE
Confidence 357899999999999999999999999999999999999999999998776665 4566667778999999999999999
Q ss_pred EEEEEEE-----CcEEEEEEE-EecCCceEEEEEEEEEeccCC
Q 021701 272 VTEMWLQ-----GLRVIYQVK-VKERNRSALSGFVDVHRLASS 308 (309)
Q Consensus 272 ~~~~~~~-----~~~v~~~~~-~~~~g~~v~~g~a~v~~p~~~ 308 (309)
+++.++. .+.++++++ .||+|++|++|++++..|+..
T Consensus 103 ~~~~~V~~~~~~~~~v~~~~~~~nq~G~~V~~g~~~~l~~~~~ 145 (466)
T PRK08190 103 TVTVTVREKDPEKRIVVLDCRCTNQDGEVVITGTAEVIAPTEK 145 (466)
T ss_pred EEEEEEEEEECCCCEEEEEEEEEeCCCCEEEEEEEEeeccccc
Confidence 9998873 246788877 499999999999999987764
No 20
>cd03454 YdeM YdeM is a Bacillus subtilis protein that belongs to a family of prokaryotic proteins of unkown function. YdeM has sequence similarity to the hot-dog fold of (R)-specific enoyl-CoA hydratase. Other enzymes with this fold include the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=99.79 E-value=1.5e-18 Score=141.14 Aligned_cols=110 Identities=22% Similarity=0.145 Sum_probs=88.6
Q ss_pred ecCHHHHHHHHHHhCCCCCCCCCHHHHhhcCCCCceechHhHHHHHHHHHHHhhhcCC-C-ccEEEEEEEECcCCCCCCE
Q 021701 193 DYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGD-P-NMVKNIFSRFLLHVYPGET 270 (309)
Q Consensus 193 ~~~~~~~~~~~~~sgD~npiH~d~~~A~~~G~~~~i~hG~~~~~~~~~~~~~~~~~g~-~-~~~~~~~~rf~~pv~~gdt 270 (309)
..+..++..|+++ +|+||||+|+++|+..||+++|+||+++++++.+++.+....++ . ......+++|.+||++||+
T Consensus 16 ~vt~~~v~~Fa~~-~D~npih~D~e~A~~~~~~~~ia~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~pv~~Gd~ 94 (140)
T cd03454 16 TVTEEEIIAFARE-FDPQPFHLDEEAAKESLFGGLAASGWHTAAITMRLLVDAGLSGSASGGSPGIDELRWPRPVRPGDT 94 (140)
T ss_pred EEcHHHHHHHHHc-cCCCccCcCHHHHhcCCCCCeeechHHHHHHHHHhhhhhccccceEEEEcceeeeEeCCCCCCCCE
Confidence 4678999999997 99999999999999999999999999999999877654322221 1 2223358999999999999
Q ss_pred EEEEEEEE--------C--cEEEEEEEE-ecCCceEEEEEEEEE
Q 021701 271 LVTEMWLQ--------G--LRVIYQVKV-KERNRSALSGFVDVH 303 (309)
Q Consensus 271 l~~~~~~~--------~--~~v~~~~~~-~~~g~~v~~g~a~v~ 303 (309)
|+++.++. + +.+++++.+ ||+|++|++|++++.
T Consensus 95 l~~~~~v~~~~~~~~~~~~~~v~~~~~~~nq~g~~v~~~~~~~~ 138 (140)
T cd03454 95 LSVEVEVLDKRPSRSRPDRGIVTLRSETLNQRGEVVLTFEATVL 138 (140)
T ss_pred EEEEEEEEEEeecCCCCCCeEEEEEEEEEcCCCCEEEEEEehhe
Confidence 99988761 1 367777774 899999999998765
No 21
>cd03450 NodN NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.
Probab=99.77 E-value=9.1e-18 Score=137.59 Aligned_cols=109 Identities=21% Similarity=0.142 Sum_probs=84.2
Q ss_pred eecCHHHHHHHHHHhCCCCCCCCCHHHHhhcCCCCceechHhHHHHHHHHHHHhhhcCCC---ccEEEEEEEECcCCCCC
Q 021701 192 EDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDP---NMVKNIFSRFLLHVYPG 268 (309)
Q Consensus 192 ~~~~~~~~~~~~~~sgD~npiH~d~~~A~~~G~~~~i~hG~~~~~~~~~~~~~~~~~g~~---~~~~~~~~rf~~pv~~g 268 (309)
...+..++..|++++||+||||+|+++|++.||+++|+||+++++++.+++.+++..... ..+...++||.+||++|
T Consensus 22 ~~vt~~di~~FA~~sgD~nPiH~D~e~A~~~gfg~~Ia~G~~t~sl~~~l~~~~~~~~~~~~~~~~g~~~~rF~~PV~~G 101 (149)
T cd03450 22 VTVDQERIDQFADATGDHQWIHVDPERAAAEPFGGTIAHGFLTLSLLPALTPQLFRVEGVKMGVNYGLDKVRFPAPVPVG 101 (149)
T ss_pred EEECHHHHHHHHHhhCCCCccccCHHHHhhCCCCCeEECHHHHHHHHHHHHHhcccCCCceEEEEeeccEEEeCcceeCC
Confidence 346799999999999999999999999999999999999999999999888776421112 23344689999999999
Q ss_pred CEEEEEEEEE------Cc--EEEEEEEE--ecCCceEEEEEE
Q 021701 269 ETLVTEMWLQ------GL--RVIYQVKV--KERNRSALSGFV 300 (309)
Q Consensus 269 dtl~~~~~~~------~~--~v~~~~~~--~~~g~~v~~g~a 300 (309)
|+|+++.++. ++ .+..++.+ ...+++++..+.
T Consensus 102 Dtl~~~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 143 (149)
T cd03450 102 SRVRGRFTLLSVEELKGGGVQVTLEVTVEIEGEDKPACVAEW 143 (149)
T ss_pred cEEEEEEEEEEEEEcCCCeEEEEEEEEEEEeCCCCceEEEEE
Confidence 9999998762 23 44444443 344556665543
No 22
>PRK13691 (3R)-hydroxyacyl-ACP dehydratase subunit HadC; Provisional
Probab=99.76 E-value=1.9e-17 Score=137.96 Aligned_cols=111 Identities=10% Similarity=0.014 Sum_probs=84.7
Q ss_pred ecCHHHHHHHHHHhCCCCCCCCCHHHHhhcCCCCceechHhHHHHHHHHHHHhhh----cCCCc---cEEEEEEEECcCC
Q 021701 193 DYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFIC----RGDPN---MVKNIFSRFLLHV 265 (309)
Q Consensus 193 ~~~~~~~~~~~~~sgD~npiH~d~~~A~~~G~~~~i~hG~~~~~~~~~~~~~~~~----~g~~~---~~~~~~~rf~~pv 265 (309)
..++.++..|++++||+||+|+|++||+..||+++|+||++. +++...+...+. .|-+. ....++++|.+||
T Consensus 19 ~Vt~~~I~~FA~~~GD~nPlH~D~eyA~~s~fg~~IApgt~~-~~~~~~~~~~~~~~~~~g~~~~~~v~~~q~~~f~rPV 97 (166)
T PRK13691 19 VVGREQIRQFARAVKCDHPAFFSEDAAAELGYDALVAPLTFV-TIFAKYVQLDFFRHVDVGMETMQIVQVDQRFVFHKPV 97 (166)
T ss_pred EECHHHHHHHHHHHCCCCCcccCHHHHHhCCCCCcccCHHHH-HHHHHHhccccccccccCCCcceeeeeeeEEEEeCCc
Confidence 457899999999999999999999999999999999999886 333223222111 11111 1135689999999
Q ss_pred CCCCEEEEEEEEE-------CcEEEEEEE-EecCCceEEEEEEEEEe
Q 021701 266 YPGETLVTEMWLQ-------GLRVIYQVK-VKERNRSALSGFVDVHR 304 (309)
Q Consensus 266 ~~gdtl~~~~~~~-------~~~v~~~~~-~~~~g~~v~~g~a~v~~ 304 (309)
++||+|+++.++. .+.+++++. .||+|++|++++.++..
T Consensus 98 ~~GDtL~~~~~V~~~~~~~~~g~V~~~~~~~NQ~Ge~V~~~~~~~~~ 144 (166)
T PRK13691 98 LAGDKLWARMDIHSVDERFGADIVVTRNVCTNDDGELVMEAYTTLMG 144 (166)
T ss_pred CCCCEEEEEEEEEEEEEcCCCcEEEEEEEEECCCCCEEEEEEEEEEE
Confidence 9999999998762 146788877 49999999999887654
No 23
>PRK13692 (3R)-hydroxyacyl-ACP dehydratase subunit HadA; Provisional
Probab=99.74 E-value=5.6e-17 Score=134.37 Aligned_cols=113 Identities=8% Similarity=0.043 Sum_probs=85.6
Q ss_pred ecCHHHHHHHHHHhCCCCCCCCCHHHHhhcCCCCceechHhHHHHHHHHHHHhhh----cCC--CccEEEEEEEECcCCC
Q 021701 193 DYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFIC----RGD--PNMVKNIFSRFLLHVY 266 (309)
Q Consensus 193 ~~~~~~~~~~~~~sgD~npiH~d~~~A~~~G~~~~i~hG~~~~~~~~~~~~~~~~----~g~--~~~~~~~~~rf~~pv~ 266 (309)
..++.++..|++++||+||+|+|++||+..+|+++|+|+++...+-......+.. ..+ ......++++|.+||+
T Consensus 19 tvt~~dI~~FA~~~GD~nPlh~D~e~A~~~~fg~~iA~~~~~~~~gl~~~~~~~~~~~l~~~~~~~~~~~q~~~f~~PV~ 98 (159)
T PRK13692 19 EVEREKIREYAVAVQNDDAAYFEEDAAAELGYKGLLAPLTFICVFGYKAQSAFFKHANIAVADAQIVQVDQVLKFEKPIV 98 (159)
T ss_pred EeCHHHHHHHHHHHCCCCCCccCHHHHHhcCCCCcccChHHHHHhhhhhhhhhhhcccCCCCccceEeeeeEEEEeCCcc
Confidence 5679999999999999999999999999999999999988864332211111110 001 1122347999999999
Q ss_pred CCCEEEEEEEEE-----C--cEEEEEEE-EecCCceEEEEEEEEEec
Q 021701 267 PGETLVTEMWLQ-----G--LRVIYQVK-VKERNRSALSGFVDVHRL 305 (309)
Q Consensus 267 ~gdtl~~~~~~~-----~--~~v~~~~~-~~~~g~~v~~g~a~v~~p 305 (309)
+||+|+++.++. + +.+++++. .||+|++|+++++++...
T Consensus 99 ~GDtL~~~~eV~~~~~~~~~giv~~~~~v~Nq~Ge~V~~~~~~~~~r 145 (159)
T PRK13692 99 AGDKLYCDVYVDSVREAHGTQIIVTKNIVTNEEGDVVQETYTTLAGR 145 (159)
T ss_pred CCCEEEEEEEEEEEEEcCCceEEEEEEEEEcCCCCEEEEEEEEEEEe
Confidence 999999988762 1 47888877 499999999999887653
No 24
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=99.67 E-value=3.5e-16 Score=156.61 Aligned_cols=110 Identities=23% Similarity=0.207 Sum_probs=90.9
Q ss_pred ecCHHHHHHHHHHhCCCCCCCCCHHHHhhcCCCCceechHhHHHHHHHHHHHhhhcCC-CccEEEEEEEECcCCCCCCEE
Q 021701 193 DYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGD-PNMVKNIFSRFLLHVYPGETL 271 (309)
Q Consensus 193 ~~~~~~~~~~~~~sgD~npiH~d~~~A~~~G~~~~i~hG~~~~~~~~~~~~~~~~~g~-~~~~~~~~~rf~~pv~~gdtl 271 (309)
..+..++..|+++|||+||||+|++||++.+|+++|+|||++++++.+++.++. ++. ...+...++||.+||++||||
T Consensus 540 tvt~~dI~~FA~~sgD~nPiH~D~e~A~~s~fg~~Ia~G~l~~sl~~~l~~~~~-~~~~~~~~g~~~~rF~~PV~~GDtl 618 (663)
T TIGR02278 540 TVTEADIALFAALSGDHFYAHMDEIAARESFFGKRVAHGYFVLSAAAGLFVDPA-PGPVLANYGLENLRFLEPVGPGDTI 618 (663)
T ss_pred EEcHHHHHHHHHhhCCCCcccCCHHHHhhCCCCCceeCHHHHHHHHHHHhhccC-ccchhhhcccceEEEcCCCCCCCEE
Confidence 578999999999999999999999999999999999999999999988776543 221 112334699999999999999
Q ss_pred EEEEEEE------C---cEEEEEEE-EecCCceEEEEEEEEE
Q 021701 272 VTEMWLQ------G---LRVIYQVK-VKERNRSALSGFVDVH 303 (309)
Q Consensus 272 ~~~~~~~------~---~~v~~~~~-~~~~g~~v~~g~a~v~ 303 (309)
+++.++. + +.+++++. .||+|++|++++..+.
T Consensus 619 ~~~~~V~e~~~~~~~~~g~v~~~~~v~nq~G~~Vl~~~~~~l 660 (663)
T TIGR02278 619 QVRLTVKRKTPRDEKTYGVVEWAAEVVNQNGEPVATYDVLTL 660 (663)
T ss_pred EEEEEEEEEEecCCCCceEEEEEEEEEcCCCCEEEEEEEHHh
Confidence 9998762 1 26778877 4899999999987654
No 25
>cd03450 NodN NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.
Probab=99.65 E-value=8.7e-16 Score=125.89 Aligned_cols=142 Identities=13% Similarity=0.107 Sum_probs=109.3
Q ss_pred cCCCChhhhcCCCCCCee-EEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCeeeeecccCcCCCCCCC
Q 021701 4 SSGINPELLLSQKLPEKT-FTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAID 82 (309)
Q Consensus 4 ~m~~d~~~~iG~~~~~~~-~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~ 82 (309)
+|. |+.+++|.+++... .++|++++++||.++| |.||+|.|+..+ +.+||++.+||+++...+........ +.
T Consensus 4 ~~~-~~~~~vG~~~~~~~~~~vt~~di~~FA~~sg--D~nPiH~D~e~A--~~~gfg~~Ia~G~~t~sl~~~l~~~~-~~ 77 (149)
T cd03450 4 SLA-DLAALVGQELGVSDWVTVDQERIDQFADATG--DHQWIHVDPERA--AAEPFGGTIAHGFLTLSLLPALTPQL-FR 77 (149)
T ss_pred CHH-HHHHhCCCCcCCCCCEEECHHHHHHHHHhhC--CCCccccCHHHH--hhCCCCCeEECHHHHHHHHHHHHHhc-cc
Confidence 444 77889999987654 6899999999999999 799999888766 67799999999999877644320011 00
Q ss_pred CCCCCCCCceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCe-EEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021701 83 LPGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKA-AILEIETKSYNAESGELLCMNRMTAFL 154 (309)
Q Consensus 83 ~~~~~~~~~~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G-~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 154 (309)
.++ ...+..+++|+++|++|+.+||+|+++.+|.++.++.++ ..++++.++.......+++..+..+++
T Consensus 78 ~~~---~~~~~~~g~~~~rF~~PV~~GDtl~~~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 147 (149)
T cd03450 78 VEG---VKMGVNYGLDKVRFPAPVPVGSRVRGRFTLLSVEELKGGGVQVTLEVTVEIEGEDKPACVAEWISRL 147 (149)
T ss_pred CCC---ceEEEEeeccEEEeCcceeCCcEEEEEEEEEEEEEcCCCeEEEEEEEEEEEeCCCCceEEEEEEEee
Confidence 011 111345788999999999999999999999999999865 778888777655667788887776654
No 26
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=99.65 E-value=9.6e-16 Score=154.16 Aligned_cols=110 Identities=21% Similarity=0.157 Sum_probs=90.5
Q ss_pred ecCHHHHHHHHHHhCCCCCCCCCHHHHhhcCCCCceechHhHHHHHHHHHHHhhhcCCC-ccEEEEEEEECcCCCCCCEE
Q 021701 193 DYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDP-NMVKNIFSRFLLHVYPGETL 271 (309)
Q Consensus 193 ~~~~~~~~~~~~~sgD~npiH~d~~~A~~~G~~~~i~hG~~~~~~~~~~~~~~~~~g~~-~~~~~~~~rf~~pv~~gdtl 271 (309)
..+..++..|+.++||+||||+|+++|+..||+++|+|||++++++.+++..+. ++.. ..+...++||.+||++||||
T Consensus 552 tvt~~di~~FA~lsgD~nPiH~D~e~A~~~~fg~~ia~G~l~~sl~~~l~~~~~-~~~~~~~~g~~~~rF~~PV~~GDtl 630 (675)
T PRK11563 552 TVTEADIVNFACLSGDTFYAHMDEIAAAANFFGGRVAHGYFVLSAAAGLFVDPA-PGPVLANYGLENLRFLTPVKPGDTI 630 (675)
T ss_pred EEcHHHHHHHHHhhCCCCccccCHHHHhhCCCCCceeCHHHHHHHHHHHhhccC-ccchhhhcccceEEEcCCCCCCCEE
Confidence 578999999999999999999999999999999999999999999988775543 2211 12333589999999999999
Q ss_pred EEEEEEE-------C--cEEEEEEE-EecCCceEEEEEEEEE
Q 021701 272 VTEMWLQ-------G--LRVIYQVK-VKERNRSALSGFVDVH 303 (309)
Q Consensus 272 ~~~~~~~-------~--~~v~~~~~-~~~~g~~v~~g~a~v~ 303 (309)
+++.++. + +.+++++. .||+|++|++|+..+.
T Consensus 631 ~~~~~V~~~~~~~~~~~~~v~~~~~~~nq~G~~V~~~~~~~l 672 (675)
T PRK11563 631 QVRLTCKRKTPRRQAPYGVVRWDVEVTNQDGELVATYDILTL 672 (675)
T ss_pred EEEEEEEEEEecCCCCceEEEEEEEEEECCCCEEEEEEEHHh
Confidence 9988762 1 35777777 4899999999987654
No 27
>cd03452 MaoC_C MaoC_C The C-terminal hot dog fold of the MaoC (monoamine oxidase C) dehydratase regulatory protein. Orthologs of MaoC include PaaZ [Escherichia coli] and PaaN [Pseudomonas putida], which are putative ring-opening enzymes involved in phenylacetic acid degradation. The C-terminal domain of MaoC has sequence similarity to (R)-specific enoyl-CoA hydratase,Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. MaoC also has an N-terminal PutA domain like that found in the E. coli PutA proline dehydrogenase and other members of the aldehyde dehydrogenase family.
Probab=99.62 E-value=3e-15 Score=122.03 Aligned_cols=134 Identities=16% Similarity=0.107 Sum_probs=105.2
Q ss_pred hcCCCCCCeeEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCeeeeecccCcCCCCCCCCCCCCCCCc
Q 021701 12 LLSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPR 91 (309)
Q Consensus 12 ~iG~~~~~~~~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~~ 91 (309)
-+|.+++.....+|+.+|++||.+.| |.||+|.|+..+ +.++|++.+|++++...+.... .. ...++ ..
T Consensus 6 ~vG~~~~~~~~tvt~~~i~~Fa~~tg--D~nPiH~D~e~A--~~~~fg~~ia~G~l~~s~~~~l--~~-~~~~~----~~ 74 (142)
T cd03452 6 RPGDSLLTHRRTVTEADIVNFACLTG--DHFYAHMDEIAA--KASFFGKRVAHGYFVLSAAAGL--FV-DPAPG----PV 74 (142)
T ss_pred CCCCEEeeCCEEEcHHHHHHHHHhhC--CCCccccCHHHH--hhCCCCCeeecHHHHHHHHhhh--Cc-cCCcc----cE
Confidence 36888765567999999999999999 799999888755 6789999999999987766443 11 01111 11
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCC--eEEEEEEEEEEECCCCcEEEEEEEEEEEecc
Q 021701 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGK--AAILEIETKSYNAESGELLCMNRMTAFLRGA 157 (309)
Q Consensus 92 ~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~--G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg~ 157 (309)
..-|+.|+++|++|+++||+|+++.+|.+++++.+ ..+++++.++ .||+|++|++.+.+++++..
T Consensus 75 ~~~~g~~~~rf~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~-~nq~g~~V~~~~~~~~~~~~ 141 (142)
T cd03452 75 LANYGLENLRFLEPVYPGDTIQVRLTCKRKIPRDGQDYGVVRWDAEV-TNQNGELVASYDILTLVAKK 141 (142)
T ss_pred EEEeccceEEECCCCCCCCEEEEEEEEEEEeecCCCCcEEEEEEEEE-EecCCCEEEEEEehHeeEec
Confidence 12377899999999999999999999999987642 3567888886 48999999999998887643
No 28
>cd03446 MaoC_like MoaC_like Similar to the MaoC (monoamine oxidase C) dehydratase regulatory protein but without the N-terminal PutA domain. This protein family has a hot-dog fold similar to that of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=99.61 E-value=7.5e-15 Score=119.14 Aligned_cols=132 Identities=16% Similarity=0.145 Sum_probs=101.9
Q ss_pred hcCCCCCCeeEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCeeeeecccCcCCCCCCCCCCCCCCCc
Q 021701 12 LLSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPR 91 (309)
Q Consensus 12 ~iG~~~~~~~~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~~ 91 (309)
-+|.++.....++|++++++||.+.| |.||+|.|+..+ +.++|++.++|++|...+.... .. ..++.. .-.
T Consensus 6 ~vG~~~~~~~~tvt~~~i~~fa~~~g--D~np~H~D~~~A--~~~~~~~~ia~G~~~~a~~~~~--~~--~~~~~~-~~~ 76 (140)
T cd03446 6 EIGQVFESVGRTVTEADVVMFAGLSG--DWNPIHTDAEYA--KKTRFGERIAHGLLTLSIATGL--LQ--RLGVFE-RTV 76 (140)
T ss_pred cCCCEeccCCEEECHHHHHHHHHhhC--CCcccccCHHHH--ccCCCCCceeccccHHHHHhhH--hh--hccccc-cee
Confidence 36888865667999999999999999 799999887655 6789999999999886544332 10 111100 112
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCC--eEEEEEEEEEEECCCCcEEEEEEEEEE
Q 021701 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGK--AAILEIETKSYNAESGELLCMNRMTAF 153 (309)
Q Consensus 92 ~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~--G~~v~~~~~~~~~~~Ge~v~~~~~t~~ 153 (309)
...++.++++|++|+++||+|+++.+|.++.++.+ ..+++++.++ .||+|++|++.+.+++
T Consensus 77 ~~~~g~~~~~f~~pv~~GD~l~~~~~v~~~~~~~~~~~~~v~~~~~~-~nq~g~~v~~~~~~~l 139 (140)
T cd03446 77 VAFYGIDNLRFLNPVFIGDTIRAEAEVVEKEEKDGEDAGVVTRRIEV-VNQRGEVVQSGEMSLL 139 (140)
T ss_pred eEEeccceEEEcCCCCCCCEEEEEEEEEEecccCCCCceEEEEEEEE-EcCCCCEEEEEEEeee
Confidence 24688899999999999999999999999987642 2567888875 4899999999988765
No 29
>cd03454 YdeM YdeM is a Bacillus subtilis protein that belongs to a family of prokaryotic proteins of unkown function. YdeM has sequence similarity to the hot-dog fold of (R)-specific enoyl-CoA hydratase. Other enzymes with this fold include the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=99.59 E-value=7.1e-15 Score=119.40 Aligned_cols=133 Identities=14% Similarity=0.140 Sum_probs=100.3
Q ss_pred hcCCCCCCeeEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCeeeeecccCcCCCCCCCCCCCCCCCc
Q 021701 12 LLSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPR 91 (309)
Q Consensus 12 ~iG~~~~~~~~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~~ 91 (309)
.+|..+....++++++++++||.+ | |.||+|.|+..+ +.++|++.+||+++...+.... ... .. +..+..
T Consensus 5 ~vG~~~~~~~~~vt~~~v~~Fa~~-~--D~npih~D~e~A--~~~~~~~~ia~g~~~~~~~~~~--~~~-~~--~~~~~~ 74 (140)
T cd03454 5 VIGQRFTSGSYTVTEEEIIAFARE-F--DPQPFHLDEEAA--KESLFGGLAASGWHTAAITMRL--LVD-AG--LSGSAS 74 (140)
T ss_pred CCccEEEeCCEEEcHHHHHHHHHc-c--CCCccCcCHHHH--hcCCCCCeeechHHHHHHHHHh--hhh-hc--cccceE
Confidence 368887766689999999999997 7 799999887655 6789999999995544433221 000 00 111123
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcC-C-e-EEEEEEEEEEECCCCcEEEEEEEEEEEe
Q 021701 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKG-K-A-AILEIETKSYNAESGELLCMNRMTAFLR 155 (309)
Q Consensus 92 ~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~-~-G-~~v~~~~~~~~~~~Ge~v~~~~~t~~~r 155 (309)
...++.++++|++|+++||+|+++.+|.+++++. + + .+++++.++ .||+|++|++.+.+++++
T Consensus 75 ~~~~~~~~~~f~~pv~~Gd~l~~~~~v~~~~~~~~~~~~~~v~~~~~~-~nq~g~~v~~~~~~~~~~ 140 (140)
T cd03454 75 GGSPGIDELRWPRPVRPGDTLSVEVEVLDKRPSRSRPDRGIVTLRSET-LNQRGEVVLTFEATVLVR 140 (140)
T ss_pred EEEcceeeeEeCCCCCCCCEEEEEEEEEEEeecCCCCCCeEEEEEEEE-EcCCCCEEEEEEehheeC
Confidence 4577889999999999999999999999999762 1 2 468888885 589999999999887763
No 30
>cd03451 FkbR2 FkbR2 is a Streptomyces hygroscopicus protein with a hot dog fold that belongs to a conserved family of proteins found in prokaryotes and archaea but not in eukaryotes. FkbR2 has sequence similarity to (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The function of FkbR2 is unknown.
Probab=99.56 E-value=2.3e-14 Score=117.12 Aligned_cols=133 Identities=16% Similarity=0.118 Sum_probs=103.0
Q ss_pred hcCCCCCC-eeEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCeeeeecccCcCCCCCCCCCCCCCCC
Q 021701 12 LLSQKLPE-KTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDP 90 (309)
Q Consensus 12 ~iG~~~~~-~~~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~ 90 (309)
-+|.+++. ...++|++++++||.++| |.||+|.|+..+ +.++|++.+||+++...+.... .. +.+.- -
T Consensus 8 ~vG~~~~~~~~~tvt~~~i~~fa~~~g--d~~piH~D~~~a--~~~~~~~~ia~G~l~~~~~~~~--~~----~~~~~-~ 76 (146)
T cd03451 8 TVGQVFEHAPGRTVTEADNVLFTLLTM--NTAPLHFDAAYA--AKTEFGRRLVNSLFTLSLALGL--SV----NDTSL-T 76 (146)
T ss_pred CCccEEecCCCeEEcHHHHHHHHHhhC--CCCccccCHHHH--hhCCCCCccccHHhHHHHHhhh--ee----hhccc-c
Confidence 47888864 457999999999999999 799999888765 6789999999999987655432 11 11100 0
Q ss_pred ceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcC-C--eEEEEEEEEEEECCCCcEEEEEEEEEEEec
Q 021701 91 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKG-K--AAILEIETKSYNAESGELLCMNRMTAFLRG 156 (309)
Q Consensus 91 ~~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~-~--G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg 156 (309)
.....+.++++|++|+++||+|+++.+|.+++++. + ..+++++.++ .||+|++|++.+.+++++.
T Consensus 77 ~~~~~~~~~~~f~~pv~~GDtl~~~~~v~~~~~~~~~~~~~~v~~~~~~-~nq~g~~V~~~~~~~~~~~ 144 (146)
T cd03451 77 AVANLGYDEVRFPAPVFHGDTLYAESEVLSKRESKSRPDAGIVTVRTVG-YNQDGEPVLSFERTALVPK 144 (146)
T ss_pred ceeccCccEEEecCCCCCCCEEEEEEEEEEEecCCCCCCCeEEEEEEEE-ECCCCCEEEEEEehhEEEc
Confidence 11234457999999999999999999999998752 2 2577888886 4899999999999998874
No 31
>cd03453 SAV4209_like SAV4209_like. Similar in sequence to the Streptomyces avermitilis SAV4209 protein, with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=99.51 E-value=8.6e-14 Score=111.21 Aligned_cols=125 Identities=15% Similarity=0.131 Sum_probs=97.1
Q ss_pred cCCCCCCeeEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCeeeeecccCcCCCCCCCCCCCCCCCce
Q 021701 13 LSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPRL 92 (309)
Q Consensus 13 iG~~~~~~~~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~~~ 92 (309)
+|..+++..+.+|+++|++||...| |.||+|.|+..+ +..||++.++++++...+.... ... ..+ +...
T Consensus 1 vG~~~~~~~~~vt~~~i~~fa~~sg--D~npiH~D~~~A--~~~g~~~~i~~G~~~~~~~~~~--~~~-~~~----~~~~ 69 (127)
T cd03453 1 VGDELPPLTPPVSRADLVRYAGASG--DFNPIHYDEDFA--KKVGLPGVIAHGMLTMGLLGRL--VTD-WVG----DPGR 69 (127)
T ss_pred CCccCCceeeecCHHHHHHHHHhhc--CCCccccCHHHH--HHcCCCCcEecHHHHHHHHHHH--HHH-HcC----Cccc
Confidence 5888888889999999999999999 799999887655 6679999999999886655332 110 111 1223
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEE
Q 021701 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMT 151 (309)
Q Consensus 93 ~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t 151 (309)
+ .+++++|++|+.+||+|+++.+|.+++.++...+++++.++ .||+|++|++.+.+
T Consensus 70 i--~~~~~rf~~Pv~~Gdtl~~~~~v~~~~~~~~~~~v~~~~~~-~nq~g~~v~~g~a~ 125 (127)
T cd03453 70 V--VSFGVRFTKPVPVPDTLTCTGIVVEKTVADGEDALTVTVDA-TDQAGGKKVLGRAI 125 (127)
T ss_pred e--EEEEEEECCcCcCCCEEEEEEEEEEEEecCCCcEEEEEEEE-EEcCCCEEEEEEEE
Confidence 3 35679999999999999999999999876532357778775 48999999887654
No 32
>cd03449 R_hydratase (R)-hydratase [(R)-specific enoyl-CoA hydratase] catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. (R)-hydratase contains a hot-dog fold similar to those of thioesterase II, and beta-hydroxydecanoyl-ACP dehydratase, MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit. The active site lies within a substrate-binding tunnel formed by the (R)-hydratase homodimer. A subset of the bacterial (R)-hydratases contain a C-terminal phosphotransacetylase (PTA) domain.
Probab=99.49 E-value=2.2e-13 Score=108.53 Aligned_cols=125 Identities=14% Similarity=0.119 Sum_probs=98.5
Q ss_pred cCCCCCCeeEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCeeeeecccCcCCCCCCCCCCCCCCCce
Q 021701 13 LSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPRL 92 (309)
Q Consensus 13 iG~~~~~~~~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~~~ 92 (309)
+|..+ ....+++++++++||.++| |.||+|.|+..+ +.+||++.+++++|...+.... .. . .++..+
T Consensus 3 ~G~~~-~~~~tv~~~~~~~fa~~~g--d~npiH~D~~~A--~~~g~~~~i~~g~~~~~~~~~~--~~--~----~~~g~~ 69 (128)
T cd03449 3 VGDSA-SLTRTITEEDVELFAELSG--DFNPIHLDEEYA--KKTRFGGRIAHGMLTASLISAV--LG--T----LLPGPG 69 (128)
T ss_pred CCCEE-EEEEEEcHHHHHHHHHHhC--CCCCccCCHHHH--hhCCCCCceecHHHHHHHHHHH--Hh--c----cCCCce
Confidence 57777 4567999999999999999 799999888655 6679999999999987654332 11 0 112245
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEE
Q 021701 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 153 (309)
Q Consensus 93 ~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~ 153 (309)
.++++++++|++|+++||+|+++++|.++..+ ++ +++++.++ .+++|++|++.+.+++
T Consensus 70 ~~~~~~~~~f~~Pv~~gd~l~~~~~v~~~~~~-~~-~v~~~~~~-~~~~g~~v~~g~~~~~ 127 (128)
T cd03449 70 TIYLSQSLRFLRPVFIGDTVTATVTVTEKRED-KK-RVTLETVC-TNQNGEVVIEGEAVVL 127 (128)
T ss_pred EEEEEEEEEECCCccCCCEEEEEEEEEEEecC-CC-EEEEEEEE-EeCCCCEEEEEEEEEe
Confidence 68899999999999999999999999999754 23 45666665 4789999999998875
No 33
>cd03455 SAV4209 SAV4209 is a Streptomyces avermitilis protein with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The alpha- and gamma-proteobacterial members of this CD have, in addition to a hot dog fold, an N-terminal extension.
Probab=99.41 E-value=1.2e-12 Score=103.92 Aligned_cols=122 Identities=12% Similarity=0.056 Sum_probs=95.2
Q ss_pred CCCCCCeeEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCeeeeecccCcCCCCCCCCCCCCCCCcee
Q 021701 14 SQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPRLL 93 (309)
Q Consensus 14 G~~~~~~~~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~~~~ 93 (309)
|..++.....+|++++.+||.+.| |.||+|.|+..+ +..||++.+++++|...+.... .. . .++ .+.
T Consensus 1 g~~~~~~~~~vt~~~i~~fa~~s~--D~~piH~D~~~A--~~~g~~~~ia~G~~~~~~~~~~--~~--~--~~~---~~~ 67 (123)
T cd03455 1 GDELPRLSIPPDPTLLFRYSAATR--DFHRIHHDRDYA--RAVGYPDLYVNGPTLAGLVIRY--VT--D--WAG---PDA 67 (123)
T ss_pred CCcCCcEEecCCHHHHHHHHhhcC--CCCcccCCHHHH--HhcCCCceEEEHHHHHHHHHHH--HH--H--ccC---Ccc
Confidence 456677778999999999999999 799999887655 5669999999999887665443 11 0 011 123
Q ss_pred eeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEE
Q 021701 94 LHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTA 152 (309)
Q Consensus 94 vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~ 152 (309)
...+++++|++|+.+||+|+++.+|.+.+.. + +++++.++ .||+|++|++.+.++
T Consensus 68 ~~~~~~~rf~~pv~~Gdtl~~~~~v~~~~~~-~--~v~~~~~~-~nq~G~~v~~g~a~v 122 (123)
T cd03455 68 RVKSFAFRLGAPLYAGDTLRFGGRVTAKRDD-E--VVTVELWA-RNSEGDHVMAGTATV 122 (123)
T ss_pred eEEEEEEEeeccccCCCEEEEEEEEEeeccC-c--EEEEEEEE-EcCCCCEEEeEEEEE
Confidence 4457899999999999999999999987532 2 78888886 589999999887664
No 34
>cd03441 R_hydratase_like (R)-hydratase [(R)-specific enoyl-CoA hydratase]. Catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. The structure of the monomer includes a five-strand antiparallel beta-sheet wrapped around a central alpha helix, referred to as a hot dog fold. The active site lies within a substrate-binding tunnel formed by the homodimer. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit.
Probab=99.40 E-value=2.2e-12 Score=102.41 Aligned_cols=119 Identities=19% Similarity=0.189 Sum_probs=94.8
Q ss_pred eEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCeeeeecccCcCCCCCCCCCCCCCCCceeeeeeEEE
Q 021701 21 TFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPRLLLHGQQYM 100 (309)
Q Consensus 21 ~~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~~~~vH~~q~~ 100 (309)
...++++++++||.++| |.||+|.|+..+ +..||++.++|+.|...+.... ... ..++ ....+++++++
T Consensus 7 ~~~~~~~~~~~fa~~~g--d~npiH~d~~~A--~~~~~~~~i~~g~~~~~~~~~~--~~~-~~~~----~~~~~~~~~~~ 75 (127)
T cd03441 7 GRTVTEADIALFARLSG--DPNPIHVDPEYA--KAAGFGGRIAHGMLTLSLASGL--LVQ-WLPG----TDGANLGSQSV 75 (127)
T ss_pred ceEcCHHHHHHHHHHhC--CCCccccCHHHH--HhCCCCCceechHHHHHHHHhh--hhh-hccC----cccceeEEeEE
Confidence 57999999999999999 799999987665 6779999999999998776554 110 1111 24578999999
Q ss_pred EEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEE
Q 021701 101 ELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMT 151 (309)
Q Consensus 101 ~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t 151 (309)
+|++|+.+||+|+++.+|.++.++....+++++.+. .|++|++++..+.+
T Consensus 76 ~f~~Pv~~Gd~l~~~~~v~~~~~~~~~~~v~~~~~~-~n~~g~~v~~g~~~ 125 (127)
T cd03441 76 RFLAPVFPGDTLRVEVEVLGKRPSKGRGVVTVRTEA-RNQGGEVVLSGEAT 125 (127)
T ss_pred EEeCCcCCCCEEEEEEEEEEeeccCCCcEEEEEEEE-EeCCCCEEEEEEEE
Confidence 999999999999999999999887533356777775 47899999885544
No 35
>PRK08190 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated
Probab=99.31 E-value=8.9e-12 Score=120.36 Aligned_cols=130 Identities=12% Similarity=0.162 Sum_probs=102.3
Q ss_pred hcCCCCCCeeEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCeeeeecccCcCCCCCCCCCCCCCCCc
Q 021701 12 LLSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPR 91 (309)
Q Consensus 12 ~iG~~~~~~~~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~~ 91 (309)
-+|.++. ...++|+++++.||...| |.||+|.|+..+ +.+||++.+++++|...+.... .. ...+ ..
T Consensus 15 ~vG~~~~-~~rtvT~~di~~FA~lsG--D~nPiH~D~e~A--k~sgfg~~IahG~l~~s~~~~l--~~-~~~~-----g~ 81 (466)
T PRK08190 15 AIGDSAS-LVRTLTPDDIELFAAMSG--DVNPAHLDAAYA--ASDGFHHVVAHGMWGGALISAV--LG-TRLP-----GP 81 (466)
T ss_pred CCCCEEe-eeEEecHHHHHHHHHHhC--CCCCCCcCHHHH--HhCCCCCceeCHHHHHHHHHHH--Hh-hhCC-----Cc
Confidence 3678874 457999999999999999 899999888765 6789999999999986654332 11 0112 23
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEecc
Q 021701 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGA 157 (309)
Q Consensus 92 ~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg~ 157 (309)
+.+|++++++|++|+++||+|+++.+|.+.+. ++| ++++++++ .||+|++|++.+.+++.+..
T Consensus 82 ~~~~~~~~~rF~~PV~~GDtl~~~~~V~~~~~-~~~-~v~~~~~~-~nq~G~~V~~g~~~~l~~~~ 144 (466)
T PRK08190 82 GTIYLGQSLRFRRPVRIGDTLTVTVTVREKDP-EKR-IVVLDCRC-TNQDGEVVITGTAEVIAPTE 144 (466)
T ss_pred ceEEEEEEEEEeCCcCCCCEEEEEEEEEEEEC-CCC-EEEEEEEE-EeCCCCEEEEEEEEeecccc
Confidence 56899999999999999999999999998653 334 56677775 48999999999999888643
No 36
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=99.22 E-value=3.6e-11 Score=120.74 Aligned_cols=131 Identities=17% Similarity=0.148 Sum_probs=101.2
Q ss_pred hcCCCCCCeeEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCeeeeecccCcCCCCCCCCCCCCCCCc
Q 021701 12 LLSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPR 91 (309)
Q Consensus 12 ~iG~~~~~~~~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~~ 91 (309)
-+|.+++....++|+++|++||...| |.||+|.|+..+ +.++|++.+|++++...+.... .. ...++ - .
T Consensus 529 ~VG~~~~~~~~tvt~~dI~~FA~~sg--D~nPiH~D~e~A--~~s~fg~~Ia~G~l~~sl~~~l--~~-~~~~~--~--~ 597 (663)
T TIGR02278 529 EIGDSLTTHRRTVTEADIALFAALSG--DHFYAHMDEIAA--RESFFGKRVAHGYFVLSAAAGL--FV-DPAPG--P--V 597 (663)
T ss_pred CCCCCcCCCCeEEcHHHHHHHHHhhC--CCCcccCCHHHH--hhCCCCCceeCHHHHHHHHHHH--hh-ccCcc--c--h
Confidence 47999876667999999999999999 899999887655 6779999999999986654332 10 00111 0 1
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCC-e-EEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021701 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGK-A-AILEIETKSYNAESGELLCMNRMTAFL 154 (309)
Q Consensus 92 ~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~-G-~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 154 (309)
-.-|+.|+++|++|+++||+|+++.+|.+++++.+ + .+++++.++ .||+|++|++.+.++++
T Consensus 598 ~~~~g~~~~rF~~PV~~GDtl~~~~~V~e~~~~~~~~~g~v~~~~~v-~nq~G~~Vl~~~~~~lv 661 (663)
T TIGR02278 598 LANYGLENLRFLEPVGPGDTIQVRLTVKRKTPRDEKTYGVVEWAAEV-VNQNGEPVATYDVLTLV 661 (663)
T ss_pred hhhcccceEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEE-EcCCCCEEEEEEEHHhc
Confidence 11278899999999999999999999999987643 2 367778776 48999999999887665
No 37
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=99.11 E-value=1.8e-10 Score=116.29 Aligned_cols=131 Identities=16% Similarity=0.119 Sum_probs=101.0
Q ss_pred hcCCCCCCeeEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCeeeeecccCcCCCCCCCCCCCCCCCc
Q 021701 12 LLSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPR 91 (309)
Q Consensus 12 ~iG~~~~~~~~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~~ 91 (309)
-+|.+++....++|+++|+.||...| |.||+|.|+..+ +.++|++.+|+++|...+.... .. ...++ .
T Consensus 541 ~vG~~~~~~~~tvt~~di~~FA~lsg--D~nPiH~D~e~A--~~~~fg~~ia~G~l~~sl~~~l--~~-~~~~~-----~ 608 (675)
T PRK11563 541 RIGDSLLTARRTVTEADIVNFACLSG--DTFYAHMDEIAA--AANFFGGRVAHGYFVLSAAAGL--FV-DPAPG-----P 608 (675)
T ss_pred CCCCEeccCCEEEcHHHHHHHHHhhC--CCCccccCHHHH--hhCCCCCceeCHHHHHHHHHHH--hh-ccCcc-----c
Confidence 47888876667999999999999999 899999888755 6779999999999986655433 10 00111 1
Q ss_pred eee-eeeEEEEEeccCCCCcEEEEEEEEEEEEEcCC--eEEEEEEEEEEECCCCcEEEEEEEEEEEe
Q 021701 92 LLL-HGQQYMELYKPFPSSASIRNEACIAGLHDKGK--AAILEIETKSYNAESGELLCMNRMTAFLR 155 (309)
Q Consensus 92 ~~v-H~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~--G~~v~~~~~~~~~~~Ge~v~~~~~t~~~r 155 (309)
.+. .+-+.++|++|+++||+|+++.+|.+++++.+ ..+++++.++. ||+|++|++.+..+++|
T Consensus 609 ~~~~~g~~~~rF~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~-nq~G~~V~~~~~~~lv~ 674 (675)
T PRK11563 609 VLANYGLENLRFLTPVKPGDTIQVRLTCKRKTPRRQAPYGVVRWDVEVT-NQDGELVATYDILTLVA 674 (675)
T ss_pred hhhhcccceEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEE-ECCCCEEEEEEEHHhcc
Confidence 111 23468999999999999999999999987643 24688888864 89999999999877654
No 38
>COG2030 MaoC Acyl dehydratase [Lipid metabolism]
Probab=99.04 E-value=1.6e-09 Score=89.96 Aligned_cols=133 Identities=15% Similarity=0.166 Sum_probs=102.4
Q ss_pred hcCCCCCCee-EEechhHHHHHHhhcCCCCCCCCCcccccceeec-cCccccccCCeeeeecccCcCCCCCCCCCCCCCC
Q 021701 12 LLSQKLPEKT-FTYTERDAAIYALGVGACGRDAVDADELKYVYHE-NGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHD 89 (309)
Q Consensus 12 ~iG~~~~~~~-~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~-~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~ 89 (309)
-+|..+.... ..+++++++.||...| |.||+|.|+..+ +. ++|++.+|...+...+........ +..+
T Consensus 21 ~vG~~~~~~~~~~~t~~d~~~fa~~tg--D~qpiH~D~e~A--~~~~~fg~~iahG~~t~a~~~~~~~~~------~~~~ 90 (159)
T COG2030 21 EVGQVFPHSPWRTVTEADIVLFAAVTG--DPNPIHLDPEAA--KKTSGFGGPIAHGMLTLALAMGLVVAA------LGDP 90 (159)
T ss_pred cCCcEEecCCceEecHHHHHHHHHhcC--CCCceecCHHHH--hccCCCCCEehhHHHHHHHHHHHHHHh------ccCc
Confidence 4787765443 5999999999999999 899999988777 55 589999999877766554321000 1111
Q ss_pred CceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEe
Q 021701 90 PRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLR 155 (309)
Q Consensus 90 ~~~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~r 155 (309)
-.+.-.+.++++|++|+.+||+|+.++++.+++++++.-++.+..++ .+++|+.+.....+.+++
T Consensus 91 ~~~~~~g~~~vRF~~PV~~Gdtl~~~~~v~~~~~~~~~G~v~~~~~~-~~~~g~~v~~~~~~~~~~ 155 (159)
T COG2030 91 SVGANLGGDEVRFVKPVFPGDTLRARVEVLDKRPSKSRGLVTLRLET-VNQEGELVLTLEATVLVL 155 (159)
T ss_pred ceeeeccccceEecCCCCCCCEEEEEEEEEEeeecCCceEEEEEEEE-EccCCcEEEEEEEeEeEe
Confidence 14457788999999999999999999999999999874346666665 489999999999887764
No 39
>cd03447 FAS_MaoC FAS_MaoC, the MaoC-like hot dog fold of the fatty acid synthase, beta subunit. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and 17-beta-hydroxysteriod dehydrogenase (HSD).
Probab=99.01 E-value=2.9e-09 Score=84.90 Aligned_cols=116 Identities=11% Similarity=0.027 Sum_probs=83.5
Q ss_pred eEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCeeeeecccCcCCCCCCCCCCCCCCCceeeeeeEEE
Q 021701 21 TFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPRLLLHGQQYM 100 (309)
Q Consensus 21 ~~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~~~~vH~~q~~ 100 (309)
....+..|++.||...| |.||+|.|+..+ +..||++.+++..+...+.... ... ..++ .+...+ .++++
T Consensus 7 ~~~~t~~d~~~fa~lsG--D~nPiH~D~~~A--~~~g~~~~iahG~l~~~~~~~~--~~~-~~~~--~~~~~~--~~~~~ 75 (126)
T cd03447 7 LTITAPASNEPYARVSG--DFNPIHVSRVFA--SYAGLPGTITHGMYTSAAVRAL--VET-WAAD--NDRSRV--RSFTA 75 (126)
T ss_pred EEEEChHHHHHHHHHhC--CCCccCCCHHHH--HHcCCCCCeechhHHHHHHHHH--HHH-hccC--CCcceE--EEEEE
Confidence 35889999999999999 899999887655 6679999999998877655332 110 0111 122222 34799
Q ss_pred EEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCC-CcEEEEEEEEE
Q 021701 101 ELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAES-GELLCMNRMTA 152 (309)
Q Consensus 101 ~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~-Ge~v~~~~~t~ 152 (309)
+|.+|+.+||+|+++.++.++.+ | .++++.++ .+++ |++|++.+.+.
T Consensus 76 rf~~PV~~gdtl~~~~~v~~~~~---~-~~~~~~~~-~nq~~g~~V~~g~~~v 123 (126)
T cd03447 76 SFVGMVLPNDELEVRLEHVGMVD---G-RKVIKVEA-RNEETGELVLRGEAEV 123 (126)
T ss_pred EEcccCcCCCEEEEEEEEEEEeC---C-eEEEEEEE-EECCCCCEEEEEEEEE
Confidence 99999999999999999998743 2 23445554 3677 99998887654
No 40
>PF13452 MaoC_dehydrat_N: N-terminal half of MaoC dehydratase; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1S9C_K 3OML_A 3KHP_A.
Probab=98.96 E-value=1.5e-09 Score=86.98 Aligned_cols=104 Identities=21% Similarity=0.132 Sum_probs=70.4
Q ss_pred ecCHHHHHHHHHHhCCCCCCCCCHHHHhhcCCCCceechHhHHHHHHHH--HHHhhhcCCCccE--EEEEEEECcCCCCC
Q 021701 193 DYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRA--IIKFICRGDPNMV--KNIFSRFLLHVYPG 268 (309)
Q Consensus 193 ~~~~~~~~~~~~~sgD~npiH~d~~~A~~~G~~~~i~hG~~~~~~~~~~--~~~~~~~g~~~~~--~~~~~rf~~pv~~g 268 (309)
..+..++..|+...||.||+|+|+++|+..|+++.+++..+...+.... +... .+.+...+ .+.+++|.+|+++|
T Consensus 13 ~v~~~~i~~ya~avg~~~p~~~d~~~a~~~~~~~~~apPt~~~~~~~~~~~~~~~-~~~~~~~~vh~~~~~~~h~Pl~~G 91 (132)
T PF13452_consen 13 TVTRRDIRRYALAVGDPNPLYLDEEYARAAGHGGLIAPPTFAVVLAWPAPAMFPD-LGFDLTRLVHGEQDIEFHRPLRPG 91 (132)
T ss_dssp EE-HHHHHHHHHHTT-CTTHHHHCTSS--TTSTT-B--GGGHHHHHHHCCGGCGC-CSS-GGGEEEEEEEEEESS--BSS
T ss_pred EECHHHHHHHHHHhCcCCccccCHhHhhccCCCCcccCHHHHhhhhcccceeeec-CCCChhhEEecCcEEEEeCCCCCC
Confidence 4578899999999999999999999999999999999999988766543 2221 23333333 47899999999999
Q ss_pred CEEEEEEEE-----E-C-c---EEEEEEE-EecCCceEEE
Q 021701 269 ETLVTEMWL-----Q-G-L---RVIYQVK-VKERNRSALS 297 (309)
Q Consensus 269 dtl~~~~~~-----~-~-~---~v~~~~~-~~~~g~~v~~ 297 (309)
|+|+++.++ . + | .+.++.. .|++|++|++
T Consensus 92 d~l~~~~~v~~v~~k~g~G~~~~v~~~~~~~~~~Ge~v~t 131 (132)
T PF13452_consen 92 DTLTATSRVTDVYDKRGAGKGVFVTVETEYTDQDGELVAT 131 (132)
T ss_dssp EEEEEEEEEEEEEEES-TTSEEEEEEEEEEE-CTTEEEEE
T ss_pred CEEEEEEEEEEEEEecCCCCEEEEEEEEEEECCCCCEEEe
Confidence 999998775 2 2 2 3455555 3899999875
No 41
>PRK13693 (3R)-hydroxyacyl-ACP dehydratase subunit HadB; Provisional
Probab=98.72 E-value=7.4e-08 Score=78.36 Aligned_cols=116 Identities=13% Similarity=0.089 Sum_probs=82.0
Q ss_pred hcCCCCCCeeEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCeeeeecccCcCCCCCCCCCCCCCCCc
Q 021701 12 LLSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPR 91 (309)
Q Consensus 12 ~iG~~~~~~~~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~~ 91 (309)
-+|.+++.....+|++++.+||.+.| |.||+|.|+..+ +..||++.+++..+...+.......+ . + ..
T Consensus 10 ~vG~~~~~~~~tvt~~di~~FA~~sg--D~nPiH~D~~~A--~~~g~~~~iahG~~~~a~~~~~~~~~-~--~-----~~ 77 (142)
T PRK13693 10 KVGDQLPEKTYPLTRQDLVNYAGVSG--DLNPIHWDDEIA--KVVGLDTAIAHGMLTMGLGGGYVTSW-V--G-----DP 77 (142)
T ss_pred CCCCCcCccceeeCHHHHHHHHHHhC--CCCccccCHHHH--HhcCCCCcEecHHHHHHHHHHHHHHh-c--C-----CC
Confidence 47999877777999999999999999 899999887654 66799999999988766543320011 0 1 11
Q ss_pred eeeeeeEEEEEeccCCCC-c----EEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCc
Q 021701 92 LLLHGQQYMELYKPFPSS-A----SIRNEACIAGLHDKGKAAILEIETKSYNAESGE 143 (309)
Q Consensus 92 ~~vH~~q~~~~~~Pl~~g-d----~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge 143 (309)
+.+ .+++++|.+|+.+| | +++++.+|.++.+ +++ .+++...+. ++++.
T Consensus 78 ~~~-~~~~~rF~~pv~~g~D~~~~~l~~~~~V~~~~~-~~~-~v~~~~~~~-~~~~~ 130 (142)
T PRK13693 78 GAV-TEYNVRFTAVVPVPNDGKGAELVFNGRVKSVDP-ESK-SVTIALTAT-TGGKK 130 (142)
T ss_pred cce-EEEEEEecccEECCCCccceEEEEEEEEEEecc-CCc-EEEEEEEEE-ECCcE
Confidence 223 26799999999854 4 9999999999853 333 456665543 44443
No 42
>PF01575 MaoC_dehydratas: MaoC like domain; InterPro: IPR002539 The C terminus of the MaoC protein is found to share similarity with a wide variety of enzymes. All these enzymes contain multiple domains. This domain is found in parts of two enzymes that have been assigned dehydratase activities. A deletion mutant of the C-terminal 271 amino acids in Q02207 from SWISSPROT abolished its 2-enoyl-CoA hydratase activity, suggesting that this region may be a hydratase enzyme []. The maoC gene is part of a operon with maoA which is involved in the synthesis of monoamine oxidase [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1PN4_C 1PN2_B 1S9C_K 3OML_A 1Q6W_B 2B3M_A 3K67_B ....
Probab=98.54 E-value=1.9e-08 Score=79.69 Aligned_cols=113 Identities=14% Similarity=0.093 Sum_probs=76.4
Q ss_pred hhcCCCCCC-eeEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCeeeeecccCcCCCCCCCCCCCCCC
Q 021701 11 LLLSQKLPE-KTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHD 89 (309)
Q Consensus 11 ~~iG~~~~~-~~~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~ 89 (309)
..+|..+.. ....+|+.++..||...| |.||+|.|+..+ +..||++.+++-.+...+.... ... ..++ +
T Consensus 4 ~~~g~~~~~~~~~tit~~~~~~fa~~sg--D~nPiH~D~~~A--~~~gf~~~ivhG~~~~a~~~~~--~~~-~~~~---~ 73 (122)
T PF01575_consen 4 NRIGQGIRHSRSRTITEADIRQFAALSG--DFNPIHVDPEYA--RATGFGGPIVHGMLTLALASGL--LGD-WLGP---N 73 (122)
T ss_dssp CCTTSEEEEEEEEEEEHHHHHHHHHHHT-----HHHH-HHHH--HTSTTSSSB-BHHHHHHHHHHH--HHH-HHST---T
T ss_pred CCCCCccccccCEEECHHHHHHHHHhhC--CCCcceecHHHH--hhcCCCCEEEccHHHHHHHHHH--HHH-hccC---c
Confidence 356777765 568999999999999999 899999888755 6678999999887765544322 000 0111 1
Q ss_pred CceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEE
Q 021701 90 PRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIET 134 (309)
Q Consensus 90 ~~~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~ 134 (309)
....-+..+++|.+|+.+||+|+++.++.+..+..+...+++..
T Consensus 74 -~~~~~~~~~~rF~~PV~~gdtl~~~~~v~~~~~~~~~~~v~~~~ 117 (122)
T PF01575_consen 74 -PPARLGRFNVRFRAPVFPGDTLTAEVEVTEKREGKERVRVTVTV 117 (122)
T ss_dssp -ECEEEEEEEEEESS--BTTEEEEEEEEEEEEEEEEEEEEEEEEE
T ss_pred -cceEEEEEEEEEeccccCCCEEEEEEEEEEEEEcCceEEEEEEE
Confidence 23577789999999999999999999999987776443344433
No 43
>PRK04424 fatty acid biosynthesis transcriptional regulator; Provisional
Probab=98.35 E-value=6.6e-06 Score=69.93 Aligned_cols=79 Identities=19% Similarity=0.134 Sum_probs=58.5
Q ss_pred CCceechHhHHHHHHHHHHHhhhcCCCccEEEEEEEECcCCCCCCEEEEEEEEE---CcEEEEEEEEecCCceEEEEEEE
Q 021701 225 SRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWLQ---GLRVIYQVKVKERNRSALSGFVD 301 (309)
Q Consensus 225 ~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~pv~~gdtl~~~~~~~---~~~v~~~~~~~~~g~~v~~g~a~ 301 (309)
...++||.+.++.+..++... .++........+++|.+||+|||+|.+++++. ++...+.+.+.++|++|++|++.
T Consensus 100 ~~~i~hG~f~~aqa~~la~~~-~~~~~~~~~i~~irF~kPV~pGD~L~~ea~v~~~~~~~~~v~~~~~v~g~~V~ege~~ 178 (185)
T PRK04424 100 KTGIARGHHLFAQANSLAVAV-IDAELALTGVANIRFKRPVKLGERVVAKAEVVRKKGNKYIVEVKSYVGDELVFRGKFI 178 (185)
T ss_pred CCCeecHHHHHHHHHHHHHHh-cCCcEEEEEeeeEEEccCCCCCCEEEEEEEEEEccCCEEEEEEEEEECCEEEEEEEEE
Confidence 568999999999887654322 23333333446899999999999999999874 34556666666889999999987
Q ss_pred EEe
Q 021701 302 VHR 304 (309)
Q Consensus 302 v~~ 304 (309)
+-.
T Consensus 179 ~~~ 181 (185)
T PRK04424 179 MYR 181 (185)
T ss_pred EEE
Confidence 654
No 44
>PRK00006 fabZ (3R)-hydroxymyristoyl-ACP dehydratase; Reviewed
Probab=98.30 E-value=1.1e-05 Score=65.75 Aligned_cols=92 Identities=13% Similarity=0.032 Sum_probs=61.2
Q ss_pred CCCHHHHhhcCCCCceechHhHHHH---HHHHHHHhhhc--CCCccEEE-EEEEECcCCCCCCEEEEEEEEE---CcEEE
Q 021701 213 HSDPMVAKAAGFSRPILHGLCTMGF---AVRAIIKFICR--GDPNMVKN-IFSRFLLHVYPGETLVTEMWLQ---GLRVI 283 (309)
Q Consensus 213 H~d~~~A~~~G~~~~i~hG~~~~~~---~~~~~~~~~~~--g~~~~~~~-~~~rf~~pv~~gdtl~~~~~~~---~~~v~ 283 (309)
..|..|.+....+.+|+||.+..-. +...+...... +....+.+ -+++|.+||+|||+|++++++. ++.+.
T Consensus 44 ~~d~~~~~ghfp~~pi~PG~l~iE~~aQ~~~~~~~~~~~~~~~~~~l~gi~~~kF~~pv~pGd~l~i~~~i~~~~~~~v~ 123 (147)
T PRK00006 44 TINEPFFQGHFPGYPVMPGVLIIEAMAQAAGVLALKSEENKGKLVYFAGIDKARFKRPVVPGDQLILEVELLKQRRGIWK 123 (147)
T ss_pred cCCCccccCCCcCCCcCchhHHHHHHHHHHHHHHhcCcCcCCcEEEEeeeeEEEEccccCCCCEEEEEEEEEEeeCCEEE
Confidence 3344455555567899999887433 32222211111 11222334 3799999999999999998863 46778
Q ss_pred EEEEEecCCceEEEEEEEEEe
Q 021701 284 YQVKVKERNRSALSGFVDVHR 304 (309)
Q Consensus 284 ~~~~~~~~g~~v~~g~a~v~~ 304 (309)
+++.+.++|+.+++|++++..
T Consensus 124 ~~~~~~~~g~~v~~~~~~~~~ 144 (147)
T PRK00006 124 FKGVATVDGKLVAEAELMFAI 144 (147)
T ss_pred EEEEEEECCEEEEEEEEEEEE
Confidence 887777889999999988764
No 45
>cd01288 FabZ FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid biosynthesis pathway.
Probab=98.27 E-value=1.3e-05 Score=63.76 Aligned_cols=92 Identities=15% Similarity=0.047 Sum_probs=63.6
Q ss_pred CCCCHHHHhhcCCCCceechHhHHHHHHHHHHHhhh------cCCCccEE-EEEEEECcCCCCCCEEEEEEEEE---CcE
Q 021701 212 LHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFIC------RGDPNMVK-NIFSRFLLHVYPGETLVTEMWLQ---GLR 281 (309)
Q Consensus 212 iH~d~~~A~~~G~~~~i~hG~~~~~~~~~~~~~~~~------~g~~~~~~-~~~~rf~~pv~~gdtl~~~~~~~---~~~ 281 (309)
|..|..|++...++.+++||.+..-++..+..-+.. .+....+. ..+++|.+||+|||+|++++++. ++.
T Consensus 28 v~~d~~~~~~hf~~~pi~Pg~l~iE~~aQ~~~~~~~~~~~~~~~~~~~l~~~~~~kf~~pv~pgd~l~i~~~v~~~~~~~ 107 (131)
T cd01288 28 VTINEPFFQGHFPGNPIMPGVLIIEALAQAAGILGLKSLEDFEGKLVYFAGIDKARFRKPVVPGDQLILEVELLKLRRGI 107 (131)
T ss_pred ecCCChhhcCCCCCCCcCCchHHHHHHHHHHHHHhhhcccccCCcEEEEeeecccEEccccCCCCEEEEEEEEEEeeCCE
Confidence 344666777777788999998885544433322111 11111222 36799999999999999998863 457
Q ss_pred EEEEEEEecCCceEEEEEEEEE
Q 021701 282 VIYQVKVKERNRSALSGFVDVH 303 (309)
Q Consensus 282 v~~~~~~~~~g~~v~~g~a~v~ 303 (309)
+.++++++.+|+.+.+|+++..
T Consensus 108 ~~~~~~~~~~g~~v~~~~~~~~ 129 (131)
T cd01288 108 GKFKGKAYVDGKLVAEAELMFA 129 (131)
T ss_pred EEEEEEEEECCEEEEEEEEEEE
Confidence 7778777788999999988764
No 46
>cd03448 HDE_HSD HDE_HSD The R-hydratase-like hot dog fold of the 17-beta-hydroxysteriod dehydrogenase (HSD), and Hydratase-Dehydrogenase-Epimerase (HDE) proteins. Other enzymes with this fold include MaoC dehydratase, and the fatty acid synthase beta subunit.
Probab=98.04 E-value=1.2e-05 Score=63.66 Aligned_cols=107 Identities=15% Similarity=0.101 Sum_probs=72.7
Q ss_pred eEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCeeeeecccCcCCCCCCCCCCCCCCCceeeeeeEEE
Q 021701 21 TFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPRLLLHGQQYM 100 (309)
Q Consensus 21 ~~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~~~~vH~~q~~ 100 (309)
+..++..+...|+. .| |.||+|.|+..+ +..||++.+++-.+...+.......+ ..++ ....-..+++
T Consensus 10 ~~~~~~~~~~~~~~-Sg--D~nPiH~d~e~A--~~~g~~~~iahG~~t~a~~~~~~~~~--~~~~-----~~~~~~~~~~ 77 (122)
T cd03448 10 EIPTSPDQALLYRL-SG--DYNPLHIDPAFA--KAAGFPRPILHGLCTYGFAARAVLEA--FADG-----DPARFKAIKV 77 (122)
T ss_pred EecCCcChHHHHHH-hC--CCCccccCHHHH--HHcCCCCceehhHHHHHHHHHHHHHH--hcCC-----CcceeEEEEE
Confidence 46889999999997 78 899999887655 66789999999877655432210001 0111 1123446799
Q ss_pred EEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEE
Q 021701 101 ELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMN 148 (309)
Q Consensus 101 ~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~ 148 (309)
+|.+|+.+||+|+++.++. + + .+.++... .++|+++++.
T Consensus 78 rF~~PV~~gDtl~~~~~~~-----~-~-~v~~~~~~--~~~g~~v~~g 116 (122)
T cd03448 78 RFSSPVFPGETLRTEMWKE-----G-N-RVIFQTKV--VERDVVVLSN 116 (122)
T ss_pred EEcCCccCCCEEEEEEEEe-----C-C-EEEEEEEE--ccCCcEEEEC
Confidence 9999999999999987632 2 2 45566554 2467776654
No 47
>PRK13188 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed
Probab=97.93 E-value=0.00017 Score=69.26 Aligned_cols=94 Identities=13% Similarity=0.066 Sum_probs=68.2
Q ss_pred CCCCHHHHhhcCCCCceechHhHHHHHHHHHHHh---hhcCC---CccEEEE-EEEECcCCCCCCEEEEEEEEE----Cc
Q 021701 212 LHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKF---ICRGD---PNMVKNI-FSRFLLHVYPGETLVTEMWLQ----GL 280 (309)
Q Consensus 212 iH~d~~~A~~~G~~~~i~hG~~~~~~~~~~~~~~---~~~g~---~~~~~~~-~~rf~~pv~~gdtl~~~~~~~----~~ 280 (309)
++.|..|++...++.+++||++..-.++....-+ ..++. ...+.++ +++|.+||+|||+|++++++. ++
T Consensus 356 Vs~De~ff~GHFPg~PI~PGVL~IEaMAQaagil~~~~~~~~~g~lg~LlgI~kvKF~~PV~PGDtL~I~veI~~~~~~g 435 (464)
T PRK13188 356 VTMNEPFFQGHFPGNPVMPGVLQIEAMAQTGGILVLNTVPDPENYSTYFMKIDKVKFRQKVVPGDTLIFKVELLSPIRRG 435 (464)
T ss_pred cCCCcHHhhccCCCCCccccHHHHHHHHHHHHHHHhhccCCCCCceEEEEeccEEEEcCCCCCCCEEEEEEEEEEEecCC
Confidence 7888899988778899999999874443322111 11111 1234454 899999999999999998752 46
Q ss_pred EEEEEEEEecCCceEEEEEEEEEec
Q 021701 281 RVIYQVKVKERNRSALSGFVDVHRL 305 (309)
Q Consensus 281 ~v~~~~~~~~~g~~v~~g~a~v~~p 305 (309)
.+.+++.+.++|+++++|+..+...
T Consensus 436 iv~f~g~~~vdGelVaeael~~~v~ 460 (464)
T PRK13188 436 ICQMQGKAYVNGKLVCEAELMAQIV 460 (464)
T ss_pred EEEEEEEEEECCEEEEEEEEEEEEe
Confidence 7788888778999999999877653
No 48
>PLN02864 enoyl-CoA hydratase
Probab=97.79 E-value=0.00011 Score=67.61 Aligned_cols=119 Identities=13% Similarity=0.055 Sum_probs=76.6
Q ss_pred CCCCCCee-EEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCeeeeecccCcCCCCCCCCCCCCCCCce
Q 021701 14 SQKLPEKT-FTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPRL 92 (309)
Q Consensus 14 G~~~~~~~-~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~~~ 92 (309)
+...+... -..++.+..+||...| |.||+|.|+..+ +..||+..+++-.+...+........ ..++ +..
T Consensus 184 p~~~pd~~~~~~t~~~~~~~a~lSG--D~NPiH~d~~~A--~~~gf~~~IaHGm~t~g~~~~~~~~~--~~~~---~~~- 253 (310)
T PLN02864 184 PKSQPDAVFEDQTQPSQALLYRLSG--DYNPLHSDPMFA--KVAGFTRPILHGLCTLGFAVRAVIKC--FCNG---DPT- 253 (310)
T ss_pred CCCCCCeEEeeccChhHHHHHHhhC--CCCcccCCHHHH--hhCCCCCceeccHHHHHHHHHHHHhh--hcCC---CCc-
Confidence 43443333 2789999999999999 899999887655 66789998888766543322110000 0111 111
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEE
Q 021701 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTA 152 (309)
Q Consensus 93 ~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~ 152 (309)
...+++++|.+|+.+||+|.++.+. .+ + .+.++... +++|++|++...++
T Consensus 254 -~~~~~~~rF~~PV~pGdtl~~~~~~-----~~-~-~v~~~~~~--~~~g~~vl~G~a~~ 303 (310)
T PLN02864 254 -AVKTISGRFLLHVYPGETLVTEMWL-----EG-L-RVIYQTKV--KERNKAVLSGYVDL 303 (310)
T ss_pred -eEEEEEEEEcCCccCCCEEEEEEEe-----CC-C-EEEEEEEE--ecCCeEEEEEEEEE
Confidence 2346899999999999999766542 22 2 34555553 57888888876554
No 49
>TIGR01750 fabZ beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ. This enzyme, FabZ, shows overlapping substrate specificity with FabA with regard to chain length in fatty acid biosynthesis. FabZ works preferentially on shorter chains and is often designated (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase, although its actual specificity is broader. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains.
Probab=97.70 E-value=0.00062 Score=54.93 Aligned_cols=79 Identities=13% Similarity=0.102 Sum_probs=54.2
Q ss_pred CCceechHhHHHHHHHHHHHhh---h---cCC--CccEEE-EEEEECcCCCCCCEEEEEEEEE---CcEEEEEEEEecCC
Q 021701 225 SRPILHGLCTMGFAVRAIIKFI---C---RGD--PNMVKN-IFSRFLLHVYPGETLVTEMWLQ---GLRVIYQVKVKERN 292 (309)
Q Consensus 225 ~~~i~hG~~~~~~~~~~~~~~~---~---~g~--~~~~~~-~~~rf~~pv~~gdtl~~~~~~~---~~~v~~~~~~~~~g 292 (309)
+.++++|.+..-.+.+...-+. . .+. ...+.+ .+++|.+||+|||+|+++++.. ++.+.++++.+++|
T Consensus 49 ~~pv~Pg~l~iE~~aQ~~~~~~~~~~~~~~~~~~~~~l~~~~~~kF~~~v~pGd~l~i~~~i~~~~~~~~~~~~~~~~~g 128 (140)
T TIGR01750 49 EKPIMPGVLIVEALAQAGGVLAILSLGGEIGKGKLVYFAGIDKAKFRRPVVPGDQLILHAEFLKKRRKIGKFKGEATVDG 128 (140)
T ss_pred CcCcChHHHHHHHHHHHHHHHheccccccCCCCcEEEEeecceeEECCccCCCCEEEEEEEEEEccCCEEEEEEEEEECC
Confidence 3578888777655544332111 0 111 123344 4899999999999999998863 45677787777889
Q ss_pred ceEEEEEEEEE
Q 021701 293 RSALSGFVDVH 303 (309)
Q Consensus 293 ~~v~~g~a~v~ 303 (309)
+.+++|++++.
T Consensus 129 ~~va~~~~~~~ 139 (140)
T TIGR01750 129 KVVAEAEITFA 139 (140)
T ss_pred EEEEEEEEEEE
Confidence 99999998764
No 50
>cd00493 FabA_FabZ FabA/Z, beta-hydroxyacyl-acyl carrier protein (ACP)-dehydratases: One of several distinct enzyme types of the dissociative, type II, fatty acid synthase system (found in bacteria and plants) required to complete successive cycles of fatty acid elongation. The third step of the elongation cycle, the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, is catalyzed by FabA or FabZ. FabA is bifunctional and catalyzes an additional isomerization reaction of trans-2-acyl-ACP to cis-3-acyl-ACP, an essential reaction to unsaturated fatty acid synthesis. FabZ is the primary dehydratase that participates in the elongation cycles of saturated as well as unsaturated fatty acid biosynthesis, whereas FabA is more active in the dehydration of beta-hydroxydecanoyl-ACP. The FabA structure is homodimeric with two independent active sites located at the dimer interface.
Probab=97.33 E-value=0.0059 Score=48.16 Aligned_cols=76 Identities=16% Similarity=0.115 Sum_probs=51.3
Q ss_pred CceechHhHHHHHHHHHHHhhhc-CC-------CccEEE-EEEEECcCCCCCCEEEEEEEEE---CcEEEEEEEEecCCc
Q 021701 226 RPILHGLCTMGFAVRAIIKFICR-GD-------PNMVKN-IFSRFLLHVYPGETLVTEMWLQ---GLRVIYQVKVKERNR 293 (309)
Q Consensus 226 ~~i~hG~~~~~~~~~~~~~~~~~-g~-------~~~~~~-~~~rf~~pv~~gdtl~~~~~~~---~~~v~~~~~~~~~g~ 293 (309)
.++++|.+..-++.+....+... +. ...+.+ .+++|.+|++|||+|++++++. ++.+.+++.+..+|+
T Consensus 41 ~p~lPg~~~iE~~aQ~~~~~~~~~~~~~~~~~~~~~l~~~~~~kf~~~v~pgd~l~i~~~i~~~~~~~~~~~~~~~~~g~ 120 (131)
T cd00493 41 DPVMPGVLGIEAMAQAAAALAGLLGLGKGNPPRLGYLAGVRKVKFRGPVLPGDTLTLEVELLKVRRGLGKFDGRAYVDGK 120 (131)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHhcccccccCCcEEEEEEcceeEECCCcCCCCEEEEEEEEEEeeCCEEEEEEEEEECCE
Confidence 47788877766655444333211 11 122333 5899999999999999998873 467778777644699
Q ss_pred eEEEEEEE
Q 021701 294 SALSGFVD 301 (309)
Q Consensus 294 ~v~~g~a~ 301 (309)
++.+|+..
T Consensus 121 ~v~~~~~~ 128 (131)
T cd00493 121 LVAEAELM 128 (131)
T ss_pred EEEEEEEE
Confidence 98888843
No 51
>cd03440 hot_dog The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated proteins also share the hotdog fold. These proteins have related, but distinct, catalytic activities that include metabolic roles such as thioester hydrolysis in fatty acid metabolism, and degradation of phenylacetic acid and the environmental pollutant 4-chlorobenzoate. This superfamily also includes the PaaI-like protein FapR, a non-catalytic bacterial homolog involved in transcriptional regulation of fatty acid biosynthesis.
Probab=97.25 E-value=0.0096 Score=42.15 Aligned_cols=77 Identities=26% Similarity=0.260 Sum_probs=57.8
Q ss_pred CCceechHhHHHHHHHHHHHhhhc----CCCccEEEEEEEECcCCCCCCEEEEEEEEEC---cEEEEEEEE-ecCCceEE
Q 021701 225 SRPILHGLCTMGFAVRAIIKFICR----GDPNMVKNIFSRFLLHVYPGETLVTEMWLQG---LRVIYQVKV-KERNRSAL 296 (309)
Q Consensus 225 ~~~i~hG~~~~~~~~~~~~~~~~~----g~~~~~~~~~~rf~~pv~~gdtl~~~~~~~~---~~v~~~~~~-~~~g~~v~ 296 (309)
...++||.+...++......++.. +....+.+.+++|.+|+++||.+.++.+..+ ..+.++... +++|+++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (100)
T cd03440 14 GGGIVHGGLLLALADEAAGAAAARLGGRGLGAVTLSLDVRFLRPVRPGDTLTVEAEVVRVGRSSVTVEVEVRNEDGKLVA 93 (100)
T ss_pred cCCccchHHHHHHHHHHHHHHHHHhccCCCeEEEEEEEeEEecCCCCCCEEEEEEEEEeccccEEEEEEEEECCCCCEEE
Confidence 567899999999988777765532 2345667889999999999999999999843 345666654 45588888
Q ss_pred EEEEE
Q 021701 297 SGFVD 301 (309)
Q Consensus 297 ~g~a~ 301 (309)
.+...
T Consensus 94 ~~~~~ 98 (100)
T cd03440 94 TATAT 98 (100)
T ss_pred EEEEE
Confidence 77654
No 52
>TIGR02286 PaaD phenylacetic acid degradation protein PaaD. Sequences scoring between trusted and noise include those from archaea and other species not known to catabolize phenylacetic acid and which are not adjacent to other genes potentially involved with such a pathway.
Probab=97.21 E-value=0.0097 Score=46.14 Aligned_cols=79 Identities=20% Similarity=0.091 Sum_probs=53.9
Q ss_pred CCceechHhHHHHHHHHHHHhhh-cCCCccEEEEEEEECcCCCCCCEEEEEEEEE--Cc-EEEEEEEE-ecCCceEEEEE
Q 021701 225 SRPILHGLCTMGFAVRAIIKFIC-RGDPNMVKNIFSRFLLHVYPGETLVTEMWLQ--GL-RVIYQVKV-KERNRSALSGF 299 (309)
Q Consensus 225 ~~~i~hG~~~~~~~~~~~~~~~~-~g~~~~~~~~~~rf~~pv~~gdtl~~~~~~~--~~-~v~~~~~~-~~~g~~v~~g~ 299 (309)
+.-++||-+.++++-....-... .+....-..++++|.+|+.+||+|.++.++. ++ ...+++.+ +++|+++..+.
T Consensus 29 ~~g~~HGG~i~al~D~~~~~~~~~~~~~~~t~~~~i~f~rp~~~G~~l~~~a~v~~~g~~~~~~~~~i~~~~~~~va~~~ 108 (114)
T TIGR02286 29 GHGTAHGGFLFSLADSAFAYACNSYGDAAVAAQCTIDFLRPGRAGERLEAEAVEVSRGGRTGTYDVEVVNQEGELVALFR 108 (114)
T ss_pred cCCCchHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEcCCCCEEEEEE
Confidence 45689999999888654332211 1222223467999999999999999998873 33 34455553 68899988887
Q ss_pred EEEE
Q 021701 300 VDVH 303 (309)
Q Consensus 300 a~v~ 303 (309)
+++.
T Consensus 109 ~t~~ 112 (114)
T TIGR02286 109 GTSR 112 (114)
T ss_pred EEEE
Confidence 7764
No 53
>PF03061 4HBT: Thioesterase superfamily; InterPro: IPR006683 This family contains a wide variety of enzymes, principally thioesterases. This family includes 4HBT (3.1.2.23 from EC) which catalyses the final step in the biosynthesis of 4-hydroxybenzoate from 4-chlorobenzoate in the soil dwelling microbe Pseudomonas CBS-3. This family includes various cytosolic long-chain acyl-CoA thioester hydrolases. Long-chain acyl-CoA hydrolases hydrolyse palmitoyl-CoA to CoA and palmitate, they also catalyse the hydrolysis of other long chain fatty acyl-CoA thioesters. ; PDB: 3F5O_F 2F0X_D 2H4U_C 2PRX_A 2OV9_D 1YLI_B 3BJK_F 1IXL_A 3DKZ_B 2EIS_B ....
Probab=96.83 E-value=0.016 Score=41.19 Aligned_cols=68 Identities=24% Similarity=0.238 Sum_probs=44.9
Q ss_pred eechHhHHHHHHHHHHHhh---hcC-CCccEEEEEEEECcCCCCCCEEEEEEEEE---CcEEEEEEEE-ecCCceE
Q 021701 228 ILHGLCTMGFAVRAIIKFI---CRG-DPNMVKNIFSRFLLHVYPGETLVTEMWLQ---GLRVIYQVKV-KERNRSA 295 (309)
Q Consensus 228 i~hG~~~~~~~~~~~~~~~---~~g-~~~~~~~~~~rf~~pv~~gdtl~~~~~~~---~~~v~~~~~~-~~~g~~v 295 (309)
++||...++++-.+...++ .+. .......++++|.+|+.+||+|+++.++. +..+.++..+ +++++++
T Consensus 3 ~v~~g~~~~~~d~a~~~~~~~~~~~~~~~~~~~~~i~f~~p~~~gd~l~~~~~v~~~g~~~~~~~~~v~~~~~~~~ 78 (79)
T PF03061_consen 3 IVHGGVYLSLFDEAASAALRSHGGDGRGVVTVELSIDFLRPVRPGDTLRVEARVVRVGRKSFTVEVEVYSEDGRLC 78 (79)
T ss_dssp SBCHHHHHHHHHHHHHHHHHHHHSSTEEEEEEEEEEEESS-BBTTSEEEEEEEEEEEESSEEEEEEEEEETTSCEE
T ss_pred EEhHHHHHHHHHHHHHHHHHHhccCCcceEEEEEEEEEccccCCCeEEEEEEEEEEECCEEEEEEEEEEECCCcEE
Confidence 5677777777664443322 111 23455689999999999999999999873 3466666664 5666554
No 54
>cd03443 PaaI_thioesterase PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).
Probab=96.53 E-value=0.057 Score=41.11 Aligned_cols=76 Identities=16% Similarity=0.088 Sum_probs=53.9
Q ss_pred ceechHhHHHHHHHHHHHhh---h-cCCCccEEEEEEEECcCCCCCCEEEEEEEEE--Cc-EEEEEEEE-ecCCceEEEE
Q 021701 227 PILHGLCTMGFAVRAIIKFI---C-RGDPNMVKNIFSRFLLHVYPGETLVTEMWLQ--GL-RVIYQVKV-KERNRSALSG 298 (309)
Q Consensus 227 ~i~hG~~~~~~~~~~~~~~~---~-~g~~~~~~~~~~rf~~pv~~gdtl~~~~~~~--~~-~v~~~~~~-~~~g~~v~~g 298 (309)
-++||-..++++.......+ . ++......+++++|.+|+.. +++.++.+.. ++ .+.+++.+ +++|+++.+|
T Consensus 29 g~vhgg~l~~l~d~a~~~~~~~~~~~~~~~~~~~~~i~f~~p~~~-~~v~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~a 107 (113)
T cd03443 29 GIVHGGAIATLADTAGGLAALSALPPGALAVTVDLNVNYLRPARG-GDLTARARVVKLGRRLAVVEVEVTDEDGKLVATA 107 (113)
T ss_pred CeEeHHHHHHHHHHHHHHHHhhccCCCCceEEEEEEEeEEcCCCC-CeEEEEEEEEecCceEEEEEEEEECCCCCEEEEE
Confidence 36888888888765554322 1 23344567899999999999 9999998873 33 56666665 4458888888
Q ss_pred EEEEE
Q 021701 299 FVDVH 303 (309)
Q Consensus 299 ~a~v~ 303 (309)
++...
T Consensus 108 ~~~~~ 112 (113)
T cd03443 108 RGTFA 112 (113)
T ss_pred EEEEe
Confidence 87754
No 55
>cd01289 FabA_like Domain of unknown function, appears to be related to a diverse group of beta-hydroxydecanoyl ACP dehydratases (FabA) and beta-hydroxyacyl ACP dehydratases (FabZ). This group appears to lack the conserved active site histidine of FabA and FabZ.
Probab=96.51 E-value=0.056 Score=43.53 Aligned_cols=54 Identities=13% Similarity=0.122 Sum_probs=43.4
Q ss_pred cEEEE-EEEECcCCCC-CCEEEEEEEE---EC-cEEEEEEEEecCCceEEEEEEEEEecc
Q 021701 253 MVKNI-FSRFLLHVYP-GETLVTEMWL---QG-LRVIYQVKVKERNRSALSGFVDVHRLA 306 (309)
Q Consensus 253 ~~~~~-~~rf~~pv~~-gdtl~~~~~~---~~-~~v~~~~~~~~~g~~v~~g~a~v~~p~ 306 (309)
-+.+. +++|.++++| ||+|.++++. .+ +...|++.+..+|+++.+|+..+.+|+
T Consensus 79 ~l~~i~~~~f~~~v~p~Gd~l~i~~~~~~~~~~~~~~~~~~~~v~~~~va~a~l~~~~p~ 138 (138)
T cd01289 79 FLLGSRKYEAHVDRFDLGSTLLIVVAELLQGDSGLGVFECTIEDQGGVLASGRLNVYQPA 138 (138)
T ss_pred EEEEEEEEEEEcceeCCCCeeEEEeeeeeeCCCcEEEEEEEEEECCEEEEEEEEEEEcCC
Confidence 45554 7999999998 9999998764 33 677788776667899999999998884
No 56
>cd00586 4HBT 4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active sites. There is no evidence to suggest that 4HBT is related to the type I thioesterases functioning in primary or secondary metabolic pathways. Each subunit of the 4HBT tetramer adopts a so-called hot-dog fold similar to those of beta-hydroxydecanoyl-ACP dehydratase, (R)-specific enoyl-CoA hydratase, and type II, thioesterase (TEII).
Probab=96.39 E-value=0.053 Score=40.39 Aligned_cols=58 Identities=17% Similarity=0.236 Sum_probs=45.0
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021701 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 154 (309)
Q Consensus 92 ~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 154 (309)
..+-.+.+++|++|++.|+++++++++..+.. ..+.+..+++ +.+|+++++..++++.
T Consensus 51 ~~~~~~~~i~~~~~~~~~~~i~v~~~~~~~~~----~~~~~~~~~~-~~~g~~~a~~~~~~~~ 108 (110)
T cd00586 51 GLVVVELEIDYLRPLRLGDRLTVETRVLRLGR----KSFTFEQEIF-REDGELLATAETVLVC 108 (110)
T ss_pred eEEEEEeEeeEcCccCCCCEEEEEEEEEecCc----EEEEEEEEEE-CCCCeEEEEEEEEEEE
Confidence 45667899999999999999999999998732 2244555544 4479999999988764
No 57
>PRK00006 fabZ (3R)-hydroxymyristoyl-ACP dehydratase; Reviewed
Probab=96.36 E-value=0.034 Score=45.14 Aligned_cols=58 Identities=12% Similarity=0.204 Sum_probs=45.6
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEe
Q 021701 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLR 155 (309)
Q Consensus 92 ~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~r 155 (309)
..+-+-++++|++|+++||+|++++++.... +| ++.++.++. ++|+.|++.+.+++++
T Consensus 88 ~~l~gi~~~kF~~pv~pGd~l~i~~~i~~~~---~~-~v~~~~~~~--~~g~~v~~~~~~~~~~ 145 (147)
T PRK00006 88 VYFAGIDKARFKRPVVPGDQLILEVELLKQR---RG-IWKFKGVAT--VDGKLVAEAELMFAIR 145 (147)
T ss_pred EEEeeeeEEEEccccCCCCEEEEEEEEEEee---CC-EEEEEEEEE--ECCEEEEEEEEEEEEE
Confidence 3455668999999999999999999988653 23 456666653 5899999999998875
No 58
>TIGR02286 PaaD phenylacetic acid degradation protein PaaD. Sequences scoring between trusted and noise include those from archaea and other species not known to catabolize phenylacetic acid and which are not adjacent to other genes potentially involved with such a pathway.
Probab=96.34 E-value=0.052 Score=41.97 Aligned_cols=56 Identities=18% Similarity=0.246 Sum_probs=43.2
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEE
Q 021701 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 153 (309)
Q Consensus 93 ~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~ 153 (309)
.+-.+.++.|++|++.|+++.+++++.. +++ ....++.+++ +++|+++++.+.++.
T Consensus 57 ~~t~~~~i~f~rp~~~G~~l~~~a~v~~---~g~-~~~~~~~~i~-~~~~~~va~~~~t~~ 112 (114)
T TIGR02286 57 AVAAQCTIDFLRPGRAGERLEAEAVEVS---RGG-RTGTYDVEVV-NQEGELVALFRGTSR 112 (114)
T ss_pred eEEEEEEEEEecCCCCCCEEEEEEEEEE---eCC-cEEEEEEEEE-cCCCCEEEEEEEEEE
Confidence 3567889999999999999999999882 232 2345566654 688999999998864
No 59
>cd03445 Thioesterase_II_repeat2 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=96.33 E-value=0.1 Score=39.04 Aligned_cols=77 Identities=14% Similarity=0.138 Sum_probs=59.0
Q ss_pred CCceechHhHHHHHHHHHHHhhhcCCCccEEEEEEEECcCCCCCCEEEEEEEE--ECc-EEEEEEEEecCCceEEEEEEE
Q 021701 225 SRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWL--QGL-RVIYQVKVKERNRSALSGFVD 301 (309)
Q Consensus 225 ~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~pv~~gdtl~~~~~~--~~~-~v~~~~~~~~~g~~v~~g~a~ 301 (309)
.+..+||-++++.+..++.+.. .++..+.++.+.|.+|..++..+.+++++ +|. ....++...|+|++++.+.+.
T Consensus 14 ~~~~~~GG~l~a~a~~Aa~~~~--~~~~~~~s~~~~Fl~p~~~~~pv~~~v~~lr~GRs~~~~~V~~~Q~g~~~~~a~~s 91 (94)
T cd03445 14 QGRGVFGGQVLAQALVAAARTV--PDDRVPHSLHSYFLRPGDPDQPIEYEVERLRDGRSFATRRVRAVQNGKVIFTATAS 91 (94)
T ss_pred CCCceEHHHHHHHHHHHHHhhC--CCCCCeEEEEEEecCCCCCCCCEEEEEEEEECCCcEEEEEEEEEECCEEEEEEEEE
Confidence 5778899999999987776654 23356889999999999999888888776 453 344455567889998888876
Q ss_pred EE
Q 021701 302 VH 303 (309)
Q Consensus 302 v~ 303 (309)
..
T Consensus 92 f~ 93 (94)
T cd03445 92 FQ 93 (94)
T ss_pred Ee
Confidence 53
No 60
>cd00586 4HBT 4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active sites. There is no evidence to suggest that 4HBT is related to the type I thioesterases functioning in primary or secondary metabolic pathways. Each subunit of the 4HBT tetramer adopts a so-called hot-dog fold similar to those of beta-hydroxydecanoyl-ACP dehydratase, (R)-specific enoyl-CoA hydratase, and type II, thioesterase (TEII).
Probab=96.09 E-value=0.17 Score=37.50 Aligned_cols=52 Identities=12% Similarity=0.126 Sum_probs=39.1
Q ss_pred ccEEEEEEEECcCCCCCCEEEEEEEEEC---cEEEEEEEE-ecCCceEEEEEEEEE
Q 021701 252 NMVKNIFSRFLLHVYPGETLVTEMWLQG---LRVIYQVKV-KERNRSALSGFVDVH 303 (309)
Q Consensus 252 ~~~~~~~~rf~~pv~~gdtl~~~~~~~~---~~v~~~~~~-~~~g~~v~~g~a~v~ 303 (309)
..+..++++|.+|+++||+|.++.|..+ ..+.+.+.+ +++|+++.+|.....
T Consensus 52 ~~~~~~~i~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~g~~~a~~~~~~~ 107 (110)
T cd00586 52 LVVVELEIDYLRPLRLGDRLTVETRVLRLGRKSFTFEQEIFREDGELLATAETVLV 107 (110)
T ss_pred EEEEEeEeeEcCccCCCCEEEEEEEEEecCcEEEEEEEEEECCCCeEEEEEEEEEE
Confidence 3557789999999999999999999743 344555554 346899888887643
No 61
>cd03440 hot_dog The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated proteins also share the hotdog fold. These proteins have related, but distinct, catalytic activities that include metabolic roles such as thioester hydrolysis in fatty acid metabolism, and degradation of phenylacetic acid and the environmental pollutant 4-chlorobenzoate. This superfamily also includes the PaaI-like protein FapR, a non-catalytic bacterial homolog involved in transcriptional regulation of fatty acid biosynthesis.
Probab=95.92 E-value=0.11 Score=36.37 Aligned_cols=58 Identities=14% Similarity=0.152 Sum_probs=45.2
Q ss_pred CceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEE
Q 021701 90 PRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTA 152 (309)
Q Consensus 90 ~~~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~ 152 (309)
-...+.++.++.|++|++.||.+..+.++.+...+ .+.++..+. +++|+++++...++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~ 99 (100)
T cd03440 42 GLGAVTLSLDVRFLRPVRPGDTLTVEAEVVRVGRS----SVTVEVEVR-NEDGKLVATATATF 99 (100)
T ss_pred CCeEEEEEEEeEEecCCCCCCEEEEEEEEEecccc----EEEEEEEEE-CCCCCEEEEEEEEe
Confidence 34568889999999999999999999999888544 355565543 55799998876653
No 62
>TIGR01749 fabA beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA. This enzyme, FabA, shows overlapping substrate specificity with FabZ with regard to chain length in fatty acid biosynthesis. It is commonly designated 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) as if it were specific for that chain length, but its specificity is broader; it is active even in the initiation of fatty acid biosynthesis. This enzyme can also isomerize trans-2-decenoyl-ACP to cis-3-decenoyl-ACP to bypass reduction by FabI and instead allow biosynthesis of unsaturated fatty acids. FabA cannot elongate unsaturated fatty acids.
Probab=95.73 E-value=0.18 Score=42.08 Aligned_cols=85 Identities=14% Similarity=0.081 Sum_probs=53.9
Q ss_pred CCCceechHhHHHHHHHHHHHhhh--cCC-CccEEE-EEEEECcCCCCCCEE-EEEEEE------ECcEEEEEEEEecCC
Q 021701 224 FSRPILHGLCTMGFAVRAIIKFIC--RGD-PNMVKN-IFSRFLLHVYPGETL-VTEMWL------QGLRVIYQVKVKERN 292 (309)
Q Consensus 224 ~~~~i~hG~~~~~~~~~~~~~~~~--~g~-~~~~~~-~~~rf~~pv~~gdtl-~~~~~~------~~~~v~~~~~~~~~g 292 (309)
...++++|.+..=.+++.+.-+.. ... ...+.+ -+++|+++|+|||++ ++++.. .++.+.+++.+.-+|
T Consensus 70 p~~PvmPG~L~iEamAQ~~~~~~~~~~~~~~g~l~gi~~~kfr~~v~Pgd~~~~l~v~i~~~~~~~~~~~~~~~~i~v~g 149 (169)
T TIGR01749 70 IGDPVMPGCLGLDAMWQLVGFFLGWLGGPGRGRALGVGEVKFTGQVLPTAKKVTYRIHFKRVINRRLVMGIADGEVLVDG 149 (169)
T ss_pred CCCCcCchHHHHHHHHHHHHHHHhccccCCceEEeeccEEEEccCEecCCeEEEEEEEEEEEeecCCcEEEEEEEEEECC
Confidence 356888887776555544433221 111 112333 489999999999996 555443 135677777766678
Q ss_pred ceEEE---EEEEEEeccCC
Q 021701 293 RSALS---GFVDVHRLASS 308 (309)
Q Consensus 293 ~~v~~---g~a~v~~p~~~ 308 (309)
+++.+ +.+.+-+|+|.
T Consensus 150 ~~va~a~~~~~~~~~~~~~ 168 (169)
T TIGR01749 150 RLIYTASDLRVGLFTSTSA 168 (169)
T ss_pred EEEEEEECCEEEEecCCCC
Confidence 88887 55667778774
No 63
>PRK05174 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; Validated
Probab=95.60 E-value=0.29 Score=40.99 Aligned_cols=84 Identities=13% Similarity=0.097 Sum_probs=54.6
Q ss_pred CCceechHhHHHHHHHHHHHhhh--cCC-CccEE-EEEEEECcCCCCCCE-EEEEEEEE------CcEEEEEEEEecCCc
Q 021701 225 SRPILHGLCTMGFAVRAIIKFIC--RGD-PNMVK-NIFSRFLLHVYPGET-LVTEMWLQ------GLRVIYQVKVKERNR 293 (309)
Q Consensus 225 ~~~i~hG~~~~~~~~~~~~~~~~--~g~-~~~~~-~~~~rf~~pv~~gdt-l~~~~~~~------~~~v~~~~~~~~~g~ 293 (309)
..++++|.+..=.+++.+.-+.. ... ...+. .-+++|+++|+|||+ +++++... ++.+.+++.+.-+|+
T Consensus 74 ~~PvmPG~L~iEamAQ~~~~~~~~~~~~~~g~l~g~~~~kfr~~v~Pgd~~l~l~v~i~~~~~~~~~~~~~~~~i~v~g~ 153 (172)
T PRK05174 74 GDPVMPGCLGLDAMWQLVGFYLGWLGGPGKGRALGVGEVKFTGQVLPTAKKVTYEIDIKRVINRKLVMGIADGRVLVDGE 153 (172)
T ss_pred CCCcCchHHHHHHHHHHHHHHHhcccccCceEEeeccEEEECccCcCCCEEEEEEEEEEEEecCCCCEEEEEEEEEECCE
Confidence 45888887765555444332221 111 11233 347999999999998 67766542 346777777656789
Q ss_pred eEEEE---EEEEEeccCC
Q 021701 294 SALSG---FVDVHRLASS 308 (309)
Q Consensus 294 ~v~~g---~a~v~~p~~~ 308 (309)
++.++ ...+-+|+|.
T Consensus 154 ~va~a~~~~l~~~~~~~~ 171 (172)
T PRK05174 154 EIYTAKDLKVGLFKDTSA 171 (172)
T ss_pred EEEEEEeeEEEEeccCCC
Confidence 98888 6677788875
No 64
>PF07977 FabA: FabA-like domain; InterPro: IPR013114 Fatty acids biosynthesis occurs by two distinct pathways: in fungi, mammals and mycobacteria, type I or associative fatty-acid biosynthesis (type I FAS) is accomplished by multifunctional proteins in which distinct domains catalyse specific reactions; in plants and most bacteria, type II or dissociative fatty-acid biosynthesis (type II FAS) is accomplished by distinct enzymes []. Both FabZ and FabA catalyse the dehydration of beta-hydroxyacyl acyl carrier protein (ACP) to trans 2-enoyl ACP. However, FabZ and FabA display subtle differences in substrate specificities, whereby FabA is most effective on acyl ACPs of 9-11 carbon atoms in length, while FabZ is less specific. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains. This enzyme domain has a HotDog fold.; PDB: 3D6X_F 2GLV_J 2GLM_E 2GLP_E 2GLL_C 1U1Z_F 3ESI_A 3AZB_T 3AZA_M 3AZ9_U ....
Probab=95.57 E-value=0.14 Score=40.97 Aligned_cols=75 Identities=17% Similarity=0.224 Sum_probs=40.9
Q ss_pred CCceechHhHHHHHHH---HHHHhhhc--CCC-----ccE-EEEEEEECcCCCCCC-EEEEEEEEE------CcEEEEEE
Q 021701 225 SRPILHGLCTMGFAVR---AIIKFICR--GDP-----NMV-KNIFSRFLLHVYPGE-TLVTEMWLQ------GLRVIYQV 286 (309)
Q Consensus 225 ~~~i~hG~~~~~~~~~---~~~~~~~~--g~~-----~~~-~~~~~rf~~pv~~gd-tl~~~~~~~------~~~v~~~~ 286 (309)
..++++|.+..=.+.+ .+..+... ... ..+ .--+++|.+||+||| +|++++... ++.+.++.
T Consensus 46 ~~Pv~PGvl~iE~~aQ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~kF~~~v~Pg~~~l~~~v~i~~~~~~~~~~~~~~~ 125 (138)
T PF07977_consen 46 GDPVMPGVLLIEAMAQAAGFLAGYSGLAEGTGEARKVPFLAGIRNVKFRGPVYPGDKTLRIEVEIKKIRRREGGMAIFDG 125 (138)
T ss_dssp TS--B-HHHHHHHHHHHHHHHHHHHCCSSSCCCCCEEEEEEEEEEEEE-S-B-TTE-EEEEEEEEEEEEEEETTEEEEEE
T ss_pred CCCCCCeEhHHHHHHHHHHhHhhhccccccCCCcceEEEeccccEEEECccEeCCCcEEEEEEEEEEeecccCCEEEEEE
Confidence 4588998777643332 22222211 111 112 245799999999999 888876542 35677777
Q ss_pred EEecCCceEEEEE
Q 021701 287 KVKERNRSALSGF 299 (309)
Q Consensus 287 ~~~~~g~~v~~g~ 299 (309)
++..+|+.+.+++
T Consensus 126 ~~~vdg~~v~~~~ 138 (138)
T PF07977_consen 126 TAYVDGELVAEAE 138 (138)
T ss_dssp EEEETTEEEEEEE
T ss_pred EEEECCEEEEEEC
Confidence 7666888887753
No 65
>PRK10800 acyl-CoA thioesterase YbgC; Provisional
Probab=95.55 E-value=0.3 Score=38.47 Aligned_cols=60 Identities=13% Similarity=0.177 Sum_probs=47.6
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEec
Q 021701 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRG 156 (309)
Q Consensus 92 ~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg 156 (309)
+.+=.+.+++|++|+..||++++++++..+.. .-+++..+++ +.+|+++++..++++.-.
T Consensus 53 ~~~v~~~~i~y~~~~~~~d~i~v~t~v~~~~~----~s~~~~~~i~-~~~g~~~a~~~~~~v~~d 112 (130)
T PRK10800 53 AFVVRKMTVEYYAPARLDDMLEVQSEITSMRG----TSLTFTQRIV-NAEGTLLNEAEVLIVCVD 112 (130)
T ss_pred EEEEEEEEEEEcCcccCCCEEEEEEEEEeeCc----EEEEEEEEEE-cCCCeEEEEEEEEEEEEE
Confidence 45566899999999999999999999998863 2344555554 568999999999988764
No 66
>TIGR00369 unchar_dom_1 uncharacterized domain 1. Most proteins containing this domain consist almost entirely of a single copy of this domain. A protein from C. elegans consists of two tandem copies of the domain. The domain is also found as the N-terminal region of an apparent initiation factor eIF-2B alpha subunit of Aquifex aeolicus. The function of the domain is unknown.
Probab=95.40 E-value=0.3 Score=37.80 Aligned_cols=76 Identities=14% Similarity=0.054 Sum_probs=49.4
Q ss_pred CceechHhHHHHHHHHH---HHhhh-cCCCccEEEEEEEECcCCCCCCEEEEEEEEE--Cc-EEEEEEEE-ecCCceEEE
Q 021701 226 RPILHGLCTMGFAVRAI---IKFIC-RGDPNMVKNIFSRFLLHVYPGETLVTEMWLQ--GL-RVIYQVKV-KERNRSALS 297 (309)
Q Consensus 226 ~~i~hG~~~~~~~~~~~---~~~~~-~g~~~~~~~~~~rf~~pv~~gdtl~~~~~~~--~~-~v~~~~~~-~~~g~~v~~ 297 (309)
.-++||-..++++-... ..... ++....-.+++++|.+|+..| .|.++.++. |+ ...+++++ +++|+++..
T Consensus 32 ~g~vhGG~l~~l~D~a~~~a~~~~~~~~~~~vt~~l~i~f~~p~~~g-~l~a~a~v~~~gr~~~~~~~~i~~~~g~~va~ 110 (117)
T TIGR00369 32 FGSLHGGVSAALADTAGSAAGYLCNSGGQAVVGLELNANHLRPAREG-KVRAIAQVVHLGRQTGVAEIEIVDEQGRLCAL 110 (117)
T ss_pred cccChHHHHHHHHHHHHHHHHHhhcCCCceEEEEEEEeeeccccCCC-EEEEEEEEEecCceEEEEEEEEECCCCCEEEE
Confidence 34688888888765333 11111 122222347899999999999 898887763 43 34456664 678999998
Q ss_pred EEEEE
Q 021701 298 GFVDV 302 (309)
Q Consensus 298 g~a~v 302 (309)
+.++.
T Consensus 111 ~~~t~ 115 (117)
T TIGR00369 111 SRGTT 115 (117)
T ss_pred EEEEE
Confidence 88765
No 67
>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B.
Probab=95.40 E-value=0.38 Score=42.52 Aligned_cols=79 Identities=15% Similarity=0.115 Sum_probs=56.1
Q ss_pred CceechHhHHHHHHHHHHHhhhcCCCccEEEEEEEECcCCCCCCEEEEEEEE--ECc-EEEEEEEEecCCceEEEEEEEE
Q 021701 226 RPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWL--QGL-RVIYQVKVKERNRSALSGFVDV 302 (309)
Q Consensus 226 ~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~pv~~gdtl~~~~~~--~~~-~v~~~~~~~~~g~~v~~g~a~v 302 (309)
+..+||-+.++++..++.... +++...+.++.+.|.+|+.+| .+.+++++ .|. ....++++-|+|++++++.+..
T Consensus 9 g~~~~GG~~a~~~~~A~~~~~-~~~~~~~~s~~~~fl~p~~~~-~~~~~v~~~r~Gr~~~~~~v~~~q~~~~~~~a~~~f 86 (255)
T PF13622_consen 9 GRVVHGGYLAQLLAAAARTHA-PPPGFDPHSLHVYFLRPVPPG-PVEYRVEVLRDGRSFSTRQVELSQDGKVVATATASF 86 (255)
T ss_dssp TTCE-HHHHHHHHHHHHHHCH-TTTSSEEEEEEEEESS--BSC-EEEEEEEEEEESSSEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCcChhHHHHHHHHHHHHHhc-cCCCCceEEEEeEeccccccC-CEEEEEEEeeCCCcEEEEEEEEEECCcCEEEEEEEE
Confidence 567888888888877776542 233457899999999999999 89888876 454 4455666778999999998887
Q ss_pred Eecc
Q 021701 303 HRLA 306 (309)
Q Consensus 303 ~~p~ 306 (309)
..+.
T Consensus 87 ~~~~ 90 (255)
T PF13622_consen 87 GRPE 90 (255)
T ss_dssp E--T
T ss_pred ccCc
Confidence 7654
No 68
>PRK04424 fatty acid biosynthesis transcriptional regulator; Provisional
Probab=95.36 E-value=0.095 Score=44.46 Aligned_cols=56 Identities=20% Similarity=0.318 Sum_probs=42.6
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021701 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 154 (309)
Q Consensus 93 ~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 154 (309)
.+=+.+++.|.+|+.+||+|.+++++.... ++ +..+..+++ ++|++|++...+++.
T Consensus 126 ~~~~i~~irF~kPV~pGD~L~~ea~v~~~~--~~--~~~v~~~~~--v~g~~V~ege~~~~~ 181 (185)
T PRK04424 126 ALTGVANIRFKRPVKLGERVVAKAEVVRKK--GN--KYIVEVKSY--VGDELVFRGKFIMYR 181 (185)
T ss_pred EEEEeeeEEEccCCCCCCEEEEEEEEEEcc--CC--EEEEEEEEE--ECCEEEEEEEEEEEE
Confidence 466678999999999999999999999332 22 234444442 579999999998865
No 69
>COG5496 Predicted thioesterase [General function prediction only]
Probab=95.33 E-value=0.6 Score=36.65 Aligned_cols=87 Identities=18% Similarity=0.211 Sum_probs=55.7
Q ss_pred CCCHHHHhhcCCCCceechHhHH--HHHHHHHHHhhhcCCCccE-EEEEEEECcCCCCCCEEEEEEEE---ECcEEEEEE
Q 021701 213 HSDPMVAKAAGFSRPILHGLCTM--GFAVRAIIKFICRGDPNMV-KNIFSRFLLHVYPGETLVTEMWL---QGLRVIYQV 286 (309)
Q Consensus 213 H~d~~~A~~~G~~~~i~hG~~~~--~~~~~~~~~~~~~g~~~~~-~~~~~rf~~pv~~gdtl~~~~~~---~~~~v~~~~ 286 (309)
|+++ ++...|-..+++-+.+.. -.++..+.+..++.+-..+ ....+|..+|+.+|.++.+.+.. +|..+.|+.
T Consensus 17 ~t~~-~~~~~~~~~VlATp~mi~~~E~a~~el~~~~Ld~g~ttVG~ev~vrHla~~~~G~~V~i~~~l~~v~Gr~v~f~i 95 (130)
T COG5496 17 HTVP-PAEGSGMLNVLATPAMIGFMENASYELLQPYLDNGETTVGTEVLVRHLAATPPGLTVTIGARLEKVEGRKVKFRI 95 (130)
T ss_pred ccCc-hhHhCCccceeehHHHHHHHHHHHHHHHHhhCcCCcceeeEEEEeeeccCCCCCCeEEEEEEEEEEeccEEEEEE
Confidence 4444 244455555666554332 1222333344444433333 46789999999999999998775 577899998
Q ss_pred EEecCCceEEEEEE
Q 021701 287 KVKERNRSALSGFV 300 (309)
Q Consensus 287 ~~~~~g~~v~~g~a 300 (309)
...++|+.+.+|+-
T Consensus 96 ~a~~~~~~Ig~g~h 109 (130)
T COG5496 96 IAMEGGDKIGEGTH 109 (130)
T ss_pred EEeeCCcEEeeeEE
Confidence 87677888777754
No 70
>TIGR00369 unchar_dom_1 uncharacterized domain 1. Most proteins containing this domain consist almost entirely of a single copy of this domain. A protein from C. elegans consists of two tandem copies of the domain. The domain is also found as the N-terminal region of an apparent initiation factor eIF-2B alpha subunit of Aquifex aeolicus. The function of the domain is unknown.
Probab=95.33 E-value=0.16 Score=39.41 Aligned_cols=55 Identities=16% Similarity=0.109 Sum_probs=42.3
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEE
Q 021701 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 153 (309)
Q Consensus 93 ~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~ 153 (309)
.+=.+-++.|++|.+.| .|.+++++. |..+.+..++.+++ +++|+++++.+.++.
T Consensus 62 ~vt~~l~i~f~~p~~~g-~l~a~a~v~----~~gr~~~~~~~~i~-~~~g~~va~~~~t~~ 116 (117)
T TIGR00369 62 VVGLELNANHLRPAREG-KVRAIAQVV----HLGRQTGVAEIEIV-DEQGRLCALSRGTTA 116 (117)
T ss_pred EEEEEEEeeeccccCCC-EEEEEEEEE----ecCceEEEEEEEEE-CCCCCEEEEEEEEEc
Confidence 45567899999999999 899999876 22234566666764 678999999998874
No 71
>cd03442 BFIT_BACH Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, and brown adipose tissues. The archeal and eukaryotic members of this family have two tandem copies of the conserved hot dog fold, while most bacterial members have only one copy.
Probab=95.30 E-value=0.45 Score=36.58 Aligned_cols=78 Identities=17% Similarity=0.141 Sum_probs=45.5
Q ss_pred eechHhHHHHHHHHHHHhh--hcCCCccEEEE-EEEECcCCCCCCEEEEEEEEE--C-cEEEEEEEE-ec-----CCceE
Q 021701 228 ILHGLCTMGFAVRAIIKFI--CRGDPNMVKNI-FSRFLLHVYPGETLVTEMWLQ--G-LRVIYQVKV-KE-----RNRSA 295 (309)
Q Consensus 228 i~hG~~~~~~~~~~~~~~~--~~g~~~~~~~~-~~rf~~pv~~gdtl~~~~~~~--~-~~v~~~~~~-~~-----~g~~v 295 (309)
++||-..+.++-.+..... ..+........ +++|.+|+.+||.|.++.++. + ..+.+++.+ ++ +++++
T Consensus 24 ~v~~g~~~~~~d~a~~~~~~~~~~~~~~~~~~~~~~f~~p~~~gd~l~i~~~v~~~g~~~~~~~~~i~~~~~~~~~~~~~ 103 (123)
T cd03442 24 TIFGGWLLEWMDELAGIAAYRHAGGRVVTASVDRIDFLKPVRVGDVVELSARVVYTGRTSMEVGVEVEAEDPLTGERRLV 103 (123)
T ss_pred cEeHHHHHHHHHHHHHHHHHHHhCCcEEEEEECceEEcCccccCcEEEEEEEEEEecCCeEEEEEEEEEecCCCCcEEEE
Confidence 3566555555443322111 11222334456 799999999999999998873 2 355555553 22 24577
Q ss_pred EEEEEEEEec
Q 021701 296 LSGFVDVHRL 305 (309)
Q Consensus 296 ~~g~a~v~~p 305 (309)
.+|..+...+
T Consensus 104 a~~~~~~v~~ 113 (123)
T cd03442 104 TSAYFTFVAL 113 (123)
T ss_pred EEEEEEEEEE
Confidence 7787765543
No 72
>COG2050 PaaI HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.21 E-value=0.37 Score=38.78 Aligned_cols=80 Identities=24% Similarity=0.191 Sum_probs=51.6
Q ss_pred CCceechHhHHHHHHHHHHHhh-hcCCCccE---EEEEEEECcCCCCCCEEEEEEEE--ECcE-EEEEEEEe--cCCceE
Q 021701 225 SRPILHGLCTMGFAVRAIIKFI-CRGDPNMV---KNIFSRFLLHVYPGETLVTEMWL--QGLR-VIYQVKVK--ERNRSA 295 (309)
Q Consensus 225 ~~~i~hG~~~~~~~~~~~~~~~-~~g~~~~~---~~~~~rf~~pv~~gdtl~~~~~~--~~~~-v~~~~~~~--~~g~~v 295 (309)
+.-++||-+.++++-....-.. ...+.... ..++++|.+|+.+|+ ++++..+ .|.. ...++.+. ++++++
T Consensus 49 ~~G~~HGG~i~alaD~a~~~a~~~~~~~~~~~~ti~l~i~flr~~~~g~-v~a~a~v~~~G~~~~v~~i~v~~~~~~~lv 127 (141)
T COG2050 49 PGGILHGGVIAALADSAAGLAANSLLGVVALAVTLELNINFLRPVKEGD-VTAEARVLHLGRRVAVVEIEVKNDEGGRLV 127 (141)
T ss_pred CCceeeHHHHHHHHHHHHHHHHhhccCccceeEEEEEEehhccCCCCCe-EEEEEEEEeeCCEEEEEEEEEEECCCCeEE
Confidence 6679999999998764332211 11122122 368899999999999 8887765 4543 23344443 445888
Q ss_pred EEEEEEEEec
Q 021701 296 LSGFVDVHRL 305 (309)
Q Consensus 296 ~~g~a~v~~p 305 (309)
..+..+....
T Consensus 128 a~~~~t~~v~ 137 (141)
T COG2050 128 AKGTGTYAVL 137 (141)
T ss_pred EEEEEEEEEe
Confidence 8888776653
No 73
>COG0764 FabA 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism]
Probab=95.17 E-value=0.49 Score=38.54 Aligned_cols=78 Identities=13% Similarity=0.060 Sum_probs=46.5
Q ss_pred CceechHhHHHHHH---HHHHHhhhcCCC--ccE-EEEEEEECcCCCCCCEEEEEEEEE----CcEEEEEEEEecCCceE
Q 021701 226 RPILHGLCTMGFAV---RAIIKFICRGDP--NMV-KNIFSRFLLHVYPGETLVTEMWLQ----GLRVIYQVKVKERNRSA 295 (309)
Q Consensus 226 ~~i~hG~~~~~~~~---~~~~~~~~~g~~--~~~-~~~~~rf~~pv~~gdtl~~~~~~~----~~~v~~~~~~~~~g~~v 295 (309)
.+|++|.+..--++ ..+..+...... ..+ .-.++||++||.|||.+.++++.. .+...+..+..-+|+++
T Consensus 55 ~PimPGVLileamaQ~~g~~~~~~~~~~~~~~~~~gid~~kF~~~V~PGd~l~l~~~~~~~~~~~~~~~~~~a~Vdg~~v 134 (147)
T COG0764 55 DPIMPGVLILEAMAQAAGFLLGWLLGNKGKLGYFLGIDNAKFKRPVLPGDQLELEVKLLKSRRLGIGKAKGVATVDGKVV 134 (147)
T ss_pred CCCcchhHHHHHHHHHHHHHHhccccCCccEEEEEEecceeecCccCCCCEEEEEEEEEEecccceEEEEEEEEECCEEE
Confidence 37777765543322 233333211111 122 335799999999999999988753 23444555545678887
Q ss_pred EEEEEEEE
Q 021701 296 LSGFVDVH 303 (309)
Q Consensus 296 ~~g~a~v~ 303 (309)
.+++....
T Consensus 135 ~~a~~~~~ 142 (147)
T COG0764 135 AEAELLFA 142 (147)
T ss_pred EEEEEEEE
Confidence 77776554
No 74
>PRK11688 hypothetical protein; Provisional
Probab=95.04 E-value=0.27 Score=40.25 Aligned_cols=57 Identities=11% Similarity=0.087 Sum_probs=44.1
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021701 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 154 (309)
Q Consensus 92 ~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 154 (309)
..+=.+-++.|++|.+ |+.|.+++++.. ++ +.+..++.+++ +++|+++++.+.++++
T Consensus 97 ~~vTi~l~i~fl~p~~-g~~l~a~a~v~~---~g-~r~~~~~~~i~-~~~g~lvA~a~~t~~v 153 (154)
T PRK11688 97 RLGTIDLRVDYLRPGR-GERFTATSSVLR---AG-NKVAVARMELH-NEQGVHIASGTATYLV 153 (154)
T ss_pred cceEEEEEEEeeccCC-CCeEEEEEEEEE---cc-CCEEEEEEEEE-CCCCCEEEEEEEEEEe
Confidence 3456788999999995 999999999873 22 33456667765 6789999999999875
No 75
>PF03061 4HBT: Thioesterase superfamily; InterPro: IPR006683 This family contains a wide variety of enzymes, principally thioesterases. This family includes 4HBT (3.1.2.23 from EC) which catalyses the final step in the biosynthesis of 4-hydroxybenzoate from 4-chlorobenzoate in the soil dwelling microbe Pseudomonas CBS-3. This family includes various cytosolic long-chain acyl-CoA thioester hydrolases. Long-chain acyl-CoA hydrolases hydrolyse palmitoyl-CoA to CoA and palmitate, they also catalyse the hydrolysis of other long chain fatty acyl-CoA thioesters. ; PDB: 3F5O_F 2F0X_D 2H4U_C 2PRX_A 2OV9_D 1YLI_B 3BJK_F 1IXL_A 3DKZ_B 2EIS_B ....
Probab=94.99 E-value=0.17 Score=35.71 Aligned_cols=50 Identities=20% Similarity=0.382 Sum_probs=37.8
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEE
Q 021701 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLC 146 (309)
Q Consensus 92 ~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~ 146 (309)
..+=.+.++.|++|++.||.+..++++..+-.+ .+.++.+++ +++++++|
T Consensus 30 ~~~~~~~~i~f~~p~~~gd~l~~~~~v~~~g~~----~~~~~~~v~-~~~~~~~~ 79 (79)
T PF03061_consen 30 GVVTVELSIDFLRPVRPGDTLRVEARVVRVGRK----SFTVEVEVY-SEDGRLCA 79 (79)
T ss_dssp EEEEEEEEEEESS-BBTTSEEEEEEEEEEEESS----EEEEEEEEE-ETTSCEEE
T ss_pred ceEEEEEEEEEccccCCCeEEEEEEEEEEECCE----EEEEEEEEE-ECCCcEEC
Confidence 456678999999999999999999999887643 456666654 57777764
No 76
>PF12119 DUF3581: Protein of unknown function (DUF3581); InterPro: IPR021974 This family consists of uncharacterised bacterial proteins.
Probab=94.95 E-value=0.12 Score=44.06 Aligned_cols=65 Identities=20% Similarity=0.284 Sum_probs=46.3
Q ss_pred cCHHHHHHHHH-HhCCCCCCCCCHHHHhhcCCCCceechHhHHHHHHHHHHHhhhcCCCccEEEEEEEECcCCCCCCEEE
Q 021701 194 YTQPSQALVYR-LSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETLV 272 (309)
Q Consensus 194 ~~~~~~~~~~~-~sgD~npiH~d~~~A~~~G~~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~pv~~gdtl~ 272 (309)
.+++..-.||+ +.||+|||| |+ .-++-.++|=+.+++++.- . +.-.++.++|+++|-.|-.|.
T Consensus 16 is~~QAS~FAK~VAgDFNPIH-D~------DaKRFCVPGDLLFalvL~~----~-----GlS~~M~f~F~GMVg~~v~L~ 79 (218)
T PF12119_consen 16 ISAEQASRFAKEVAGDFNPIH-DP------DAKRFCVPGDLLFALVLAK----Y-----GLSQKMRFRFSGMVGDDVPLH 79 (218)
T ss_pred EcHHHHhHHHHHhccCCCccC-CC------CCccccCccHHHHHHHHHh----c-----CccceeEEEEeeeecCCceee
Confidence 35555667885 899999999 33 3467789999999987522 1 133568899999987666665
Q ss_pred EE
Q 021701 273 TE 274 (309)
Q Consensus 273 ~~ 274 (309)
+.
T Consensus 80 f~ 81 (218)
T PF12119_consen 80 FP 81 (218)
T ss_pred cc
Confidence 54
No 77
>cd01288 FabZ FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid biosynthesis pathway.
Probab=94.95 E-value=0.21 Score=39.25 Aligned_cols=56 Identities=16% Similarity=0.189 Sum_probs=42.3
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021701 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 154 (309)
Q Consensus 93 ~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 154 (309)
.+-+-++++|++|+++|+++++++++..... + .+.++.++ ..+|+++++.+.++++
T Consensus 75 ~l~~~~~~kf~~pv~pgd~l~i~~~v~~~~~--~--~~~~~~~~--~~~g~~v~~~~~~~~~ 130 (131)
T cd01288 75 YFAGIDKARFRKPVVPGDQLILEVELLKLRR--G--IGKFKGKA--YVDGKLVAEAELMFAI 130 (131)
T ss_pred EEeeecccEEccccCCCCEEEEEEEEEEeeC--C--EEEEEEEE--EECCEEEEEEEEEEEE
Confidence 3555699999999999999999999886542 2 34555554 2578999999887654
No 78
>PRK10800 acyl-CoA thioesterase YbgC; Provisional
Probab=94.88 E-value=0.23 Score=39.16 Aligned_cols=52 Identities=6% Similarity=0.031 Sum_probs=39.5
Q ss_pred ccEEEEEEEECcCCCCCCEEEEEEEEE--Cc-EEEEEEEE-ecCCceEEEEEEEEE
Q 021701 252 NMVKNIFSRFLLHVYPGETLVTEMWLQ--GL-RVIYQVKV-KERNRSALSGFVDVH 303 (309)
Q Consensus 252 ~~~~~~~~rf~~pv~~gdtl~~~~~~~--~~-~v~~~~~~-~~~g~~v~~g~a~v~ 303 (309)
..+.+.+++|.+|++.||+|.++.|+. ++ .+.+...+ +++|+++.+|..+..
T Consensus 54 ~~v~~~~i~y~~~~~~~d~i~v~t~v~~~~~~s~~~~~~i~~~~g~~~a~~~~~~v 109 (130)
T PRK10800 54 FVVRKMTVEYYAPARLDDMLEVQSEITSMRGTSLTFTQRIVNAEGTLLNEAEVLIV 109 (130)
T ss_pred EEEEEEEEEEcCcccCCCEEEEEEEEEeeCcEEEEEEEEEEcCCCeEEEEEEEEEE
Confidence 356789999999999999999999974 33 44555543 667888888876543
No 79
>TIGR01750 fabZ beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ. This enzyme, FabZ, shows overlapping substrate specificity with FabA with regard to chain length in fatty acid biosynthesis. FabZ works preferentially on shorter chains and is often designated (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase, although its actual specificity is broader. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains.
Probab=94.78 E-value=0.17 Score=40.53 Aligned_cols=56 Identities=11% Similarity=0.153 Sum_probs=42.1
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEE
Q 021701 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 153 (309)
Q Consensus 92 ~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~ 153 (309)
..+-+-++++|++|+++||+|++++++... ..+ ++.++.++ .++|+++++.+.++.
T Consensus 84 ~~l~~~~~~kF~~~v~pGd~l~i~~~i~~~---~~~-~~~~~~~~--~~~g~~va~~~~~~~ 139 (140)
T TIGR01750 84 VYFAGIDKAKFRRPVVPGDQLILHAEFLKK---RRK-IGKFKGEA--TVDGKVVAEAEITFA 139 (140)
T ss_pred EEEeecceeEECCccCCCCEEEEEEEEEEc---cCC-EEEEEEEE--EECCEEEEEEEEEEE
Confidence 356666899999999999999999998732 222 34555554 358999999988764
No 80
>PLN02647 acyl-CoA thioesterase
Probab=94.51 E-value=4.8 Score=38.80 Aligned_cols=60 Identities=13% Similarity=0.143 Sum_probs=39.1
Q ss_pred eEEEEEeccCCCCcEEEEEEEEEEEEEcCCe-EEEEEEEEEEE--CCCCcEEEEEEEEEEEecc
Q 021701 97 QQYMELYKPFPSSASIRNEACIAGLHDKGKA-AILEIETKSYN--AESGELLCMNRMTAFLRGA 157 (309)
Q Consensus 97 ~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G-~~v~~~~~~~~--~~~Ge~v~~~~~t~~~rg~ 157 (309)
=.++.|++|++.|+-|.+.++|.-+-.. +. +.+.+..+-.. ++...++.+...|++.+..
T Consensus 149 VD~i~F~~Pi~~g~~v~l~g~Vt~vGrS-SMEV~v~V~~~~~~~~~~~~~~~~~a~FtfVA~D~ 211 (437)
T PLN02647 149 VDKIVLKKPIRVDVDLKIVGAVTWVGRS-SMEIQLEVIQPTKDESNTSDSVALTANFTFVARDS 211 (437)
T ss_pred ECcEEEcCCCcCCcEEEEEEEEEEecCC-eEEEEEEEEEccccCCCCcEEEEEEEEEEEEEEcC
Confidence 3578999999999999999999876322 22 22222222000 1123468889999999876
No 81
>PF13279 4HBT_2: Thioesterase-like superfamily; PDB: 2W3X_E 3CK1_A 2GF6_C 2NUJ_A 2HLJ_A 2XFL_B 2XEM_B 2OIW_B 2HX5_A 2FUJ_A ....
Probab=94.51 E-value=0.67 Score=35.75 Aligned_cols=62 Identities=13% Similarity=0.251 Sum_probs=43.4
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCC--cEEEEEEEEEEEecc
Q 021701 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESG--ELLCMNRMTAFLRGA 157 (309)
Q Consensus 92 ~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~G--e~v~~~~~t~~~rg~ 157 (309)
+.+=.+.++.|++|+..+|++++++++.++..+ -+.++.+++...+| +++++...+.+.-..
T Consensus 43 ~~~v~~~~i~y~~~~~~~d~~~v~~~~~~~~~~----s~~~~~~i~~~~~g~~~~~a~~~~~~v~~d~ 106 (121)
T PF13279_consen 43 GFVVAESEIDYLRPLRFGDRLEVETRVEEIGGK----SFRFEQEIFRPADGKGELAATGRTVMVFVDY 106 (121)
T ss_dssp EEEEEEEEEEE-S--BTTSEEEEEEEEEEEESS----EEEEEEEEEECSTTEEEEEEEEEEEEEEEET
T ss_pred eEEEEEEEEEEcccccCCCEEEEEEEEEEECCc----EEEEEEEEEEcCCCceEEEEEEEEEEEEEeC
Confidence 457778999999999999999999999775533 24555555543345 449999999887654
No 82
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=94.43 E-value=0.37 Score=43.19 Aligned_cols=78 Identities=14% Similarity=0.159 Sum_probs=60.0
Q ss_pred ceechHhHHHHHHHHHHHhhhcCCCccEEEEEEEECcCCCCCCEEEEEEEE--ECcE-EEEEEEEecCCceEEEEEEEEE
Q 021701 227 PILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWL--QGLR-VIYQVKVKERNRSALSGFVDVH 303 (309)
Q Consensus 227 ~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~pv~~gdtl~~~~~~--~~~~-v~~~~~~~~~g~~v~~g~a~v~ 303 (309)
.-++|-+++|.+..+..+.. .+...+.++.+.|.+|..++..+.+++++ +|.. ...+++..|+|++++++.+...
T Consensus 21 ~~~fGG~~~Aqal~Aa~~tv--~~~~~~~S~h~~Fl~~~~~~~pv~~~V~~lR~GRs~~~r~V~~~Q~g~~~~~a~asf~ 98 (271)
T TIGR00189 21 NRVFGGQVVGQALAAASKTV--PEEFIPHSLHSYFVRAGDPKKPIIYDVERLRDGRSFITRRVKAVQHGKTIFTLQASFQ 98 (271)
T ss_pred CceEccHHHHHHHHHHHhcC--CCCCCcceeEEEecCCCCCCCCEEEEEEEeeCCCceEEEEEEEEECCEEEEEEEEEcc
Confidence 36889999999887777654 34566789999999999999988888886 4543 4445556789999999988876
Q ss_pred ecc
Q 021701 304 RLA 306 (309)
Q Consensus 304 ~p~ 306 (309)
.+.
T Consensus 99 ~~~ 101 (271)
T TIGR00189 99 AEE 101 (271)
T ss_pred cCC
Confidence 443
No 83
>COG0824 FcbC Predicted thioesterase [General function prediction only]
Probab=94.35 E-value=0.38 Score=38.66 Aligned_cols=51 Identities=12% Similarity=0.141 Sum_probs=39.2
Q ss_pred cEEEEEEEECcCCCCCCEEEEEEEEE--Cc-EEEEEEEEecCCceEEEEEEEEE
Q 021701 253 MVKNIFSRFLLHVYPGETLVTEMWLQ--GL-RVIYQVKVKERNRSALSGFVDVH 303 (309)
Q Consensus 253 ~~~~~~~rf~~pv~~gdtl~~~~~~~--~~-~v~~~~~~~~~g~~v~~g~a~v~ 303 (309)
.+.+..++|.+|+..||.|.++.++. ++ .+.+...+...++++.+|+.++.
T Consensus 58 ~v~~~~i~y~~p~~~~d~l~v~~~v~~~~~~s~~~~~~i~~~~~l~a~~~~~~V 111 (137)
T COG0824 58 VVVEAEIDYLRPARLGDVLTVRTRVEELGGKSLTLGYEIVNEDELLATGETTLV 111 (137)
T ss_pred EEEEEEeEECCCccCCCEEEEEEEEEeecCeEEEEEEEEEeCCEEEEEEEEEEE
Confidence 45788999999999999999999874 33 67777665333488888877644
No 84
>cd03443 PaaI_thioesterase PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).
Probab=94.29 E-value=0.8 Score=34.61 Aligned_cols=55 Identities=16% Similarity=0.204 Sum_probs=42.7
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEE
Q 021701 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 153 (309)
Q Consensus 93 ~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~ 153 (309)
.+=.+.+++|++|++. +.+.+++++... ++..+.++.+++ +++|+++++...+++
T Consensus 58 ~~~~~~~i~f~~p~~~-~~v~~~~~v~~~----g~~~~~~~~~~~-~~~~~~~a~a~~~~~ 112 (113)
T cd03443 58 AVTVDLNVNYLRPARG-GDLTARARVVKL----GRRLAVVEVEVT-DEDGKLVATARGTFA 112 (113)
T ss_pred eEEEEEEEeEEcCCCC-CeEEEEEEEEec----CceEEEEEEEEE-CCCCCEEEEEEEEEe
Confidence 4555779999999999 999999998755 344567777765 567999999887764
No 85
>PRK11688 hypothetical protein; Provisional
Probab=94.21 E-value=0.93 Score=37.06 Aligned_cols=78 Identities=17% Similarity=0.087 Sum_probs=51.3
Q ss_pred CCceechHhHHHHHHHHHHHhhh---cC---C-----------CccEEEEEEEECcCCCCCCEEEEEEEEE--Cc-EEEE
Q 021701 225 SRPILHGLCTMGFAVRAIIKFIC---RG---D-----------PNMVKNIFSRFLLHVYPGETLVTEMWLQ--GL-RVIY 284 (309)
Q Consensus 225 ~~~i~hG~~~~~~~~~~~~~~~~---~g---~-----------~~~~~~~~~rf~~pv~~gdtl~~~~~~~--~~-~v~~ 284 (309)
+.-++||-..++++-..+.-... .. . ...=.++++.|.+|+. |++|.++.++. |+ ...+
T Consensus 54 ~~G~vHGG~i~tl~D~a~g~a~~~~~~~~~~~~~~~~~~~~~~~~vTi~l~i~fl~p~~-g~~l~a~a~v~~~g~r~~~~ 132 (154)
T PRK11688 54 AQSILHGGVIASVLDVAGGLVCVGGILARHEDISEEELRQRLSRLGTIDLRVDYLRPGR-GERFTATSSVLRAGNKVAVA 132 (154)
T ss_pred CcCeeeHHHHHHHHHHHHHHHHHhhcccccccccccccccccccceEEEEEEEeeccCC-CCeEEEEEEEEEccCCEEEE
Confidence 34689999988887533321111 00 0 0012478999999995 99999998873 43 4455
Q ss_pred EEEE-ecCCceEEEEEEEEE
Q 021701 285 QVKV-KERNRSALSGFVDVH 303 (309)
Q Consensus 285 ~~~~-~~~g~~v~~g~a~v~ 303 (309)
++.+ +++|+++.+++++..
T Consensus 133 ~~~i~~~~g~lvA~a~~t~~ 152 (154)
T PRK11688 133 RMELHNEQGVHIASGTATYL 152 (154)
T ss_pred EEEEECCCCCEEEEEEEEEE
Confidence 6664 678999999888764
No 86
>cd00556 Thioesterase_II Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=94.03 E-value=0.96 Score=33.33 Aligned_cols=77 Identities=13% Similarity=-0.016 Sum_probs=53.1
Q ss_pred CceechHhHHHHHHHHHHHhhhcC---CCccEEEEEEEECcCCCCCCEEEEEEEEE--C-cEEEEEEEE-ecCCceEEEE
Q 021701 226 RPILHGLCTMGFAVRAIIKFICRG---DPNMVKNIFSRFLLHVYPGETLVTEMWLQ--G-LRVIYQVKV-KERNRSALSG 298 (309)
Q Consensus 226 ~~i~hG~~~~~~~~~~~~~~~~~g---~~~~~~~~~~rf~~pv~~gdtl~~~~~~~--~-~~v~~~~~~-~~~g~~v~~g 298 (309)
+.++||-..++++-..+......- ......++++.|.+|..+++.+..+.+.. + +....++.+ +++|+.+.++
T Consensus 14 ~~~~hgg~la~l~D~a~~~~~~~~~~~~~~~t~~~~i~F~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~G~lva~~ 93 (99)
T cd00556 14 DRRVFGGQLAAQSDLAALRTVPRPHGASGFASLDHHIYFHRPGDADEWLLYEVESLRDGRSRALRRGRAYQRDGKLVASA 93 (99)
T ss_pred CHHHHHHHHHHHHHHHHHhhhhcccCCCCeeeeEEEEEEcCCCCCCccEEEEEEecccCCCceEEEEEEECCCCcEEEEE
Confidence 568888888888765554332211 12344578999999999999999988863 3 345555655 4559999988
Q ss_pred EEEE
Q 021701 299 FVDV 302 (309)
Q Consensus 299 ~a~v 302 (309)
..+.
T Consensus 94 ~~~~ 97 (99)
T cd00556 94 TQSF 97 (99)
T ss_pred EEeE
Confidence 7654
No 87
>cd01287 FabA FabA, beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase: Bacterial protein of the type II, fatty acid synthase system that binds ACP and catalyzes both dehydration and isomerization reactions, apparently in the same active site. The FabA structure is a homodimer with two independent active sites located at the dimer interface. Each active site is tunnel-shaped and completely inaccessible to solvent. No metal ions or cofactors are required for ligand binding or catalysis.
Probab=94.00 E-value=0.78 Score=37.51 Aligned_cols=75 Identities=8% Similarity=0.094 Sum_probs=46.2
Q ss_pred CCceechHhHHHHHHHHHHHhhh--cC-----CCc---cE-EEEEEEECcCCCCCC-EEEEEEEEE-------CcEEEEE
Q 021701 225 SRPILHGLCTMGFAVRAIIKFIC--RG-----DPN---MV-KNIFSRFLLHVYPGE-TLVTEMWLQ-------GLRVIYQ 285 (309)
Q Consensus 225 ~~~i~hG~~~~~~~~~~~~~~~~--~g-----~~~---~~-~~~~~rf~~pv~~gd-tl~~~~~~~-------~~~v~~~ 285 (309)
..++++|.+..=.+++++.-++. +. .+. .+ ...+++|+++|+||| +|++++++. ++.+.++
T Consensus 48 ~~pvmPG~L~iEamaQ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~kfr~~v~Pgd~~l~~e~~i~~~~~~~~~~~~~~~ 127 (150)
T cd01287 48 GDPVMPGSLGLEAMIQLLQFYLIWLGLGTGVDNPRFQGAPGGPGEWKYRGQITPHNKKVTYEVHIKEVGRDGPRPYIIAD 127 (150)
T ss_pred CCCcCchHHHHHHHHHHHHHHHhhcccccccCcccceeEeccceEEEECccCcCCCEEEEEEEEEEEEEccCCccEEEEE
Confidence 46888887765554443322211 11 111 12 235799999999999 788887752 1456666
Q ss_pred EEEecCCceEEEEE
Q 021701 286 VKVKERNRSALSGF 299 (309)
Q Consensus 286 ~~~~~~g~~v~~g~ 299 (309)
..+.-+|+++.+++
T Consensus 128 ~~~~vdg~~v~~a~ 141 (150)
T cd01287 128 ASLWVDGLRIYEAK 141 (150)
T ss_pred EEEEECCEEEEEEE
Confidence 66555788888764
No 88
>cd03442 BFIT_BACH Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, and brown adipose tissues. The archeal and eukaryotic members of this family have two tandem copies of the conserved hot dog fold, while most bacterial members have only one copy.
Probab=94.00 E-value=0.66 Score=35.64 Aligned_cols=54 Identities=11% Similarity=0.110 Sum_probs=39.8
Q ss_pred EEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECC----CCcEEEEEEEEEEEec
Q 021701 99 YMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAE----SGELLCMNRMTAFLRG 156 (309)
Q Consensus 99 ~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~----~Ge~v~~~~~t~~~rg 156 (309)
+++|++|++.||.|..++++..+..+ .+.++.+++.+. +++++++...+++...
T Consensus 57 ~~~f~~p~~~gd~l~i~~~v~~~g~~----~~~~~~~i~~~~~~~~~~~~~a~~~~~~v~~~ 114 (123)
T cd03442 57 RIDFLKPVRVGDVVELSARVVYTGRT----SMEVGVEVEAEDPLTGERRLVTSAYFTFVALD 114 (123)
T ss_pred ceEEcCccccCcEEEEEEEEEEecCC----eEEEEEEEEEecCCCCcEEEEEEEEEEEEEEC
Confidence 89999999999999999999887322 234444443222 3578999999988874
No 89
>TIGR02799 thio_ybgC tol-pal system-associated acyl-CoA thioesterase. The tol-pal system consists of five critical genes. Inner membrane proteins TolQ and TolR convert protomotive force to energy that is transduced through TolA to an outer membrane complex of TolB and Pal. The system is known to be required to maintain outer membrane integrity. In a system with several homologous parts, ExbB and ExbD transduces energy through TonB to a variety of outer membrane proteins, many of which are siderophore receptors. The tol-pal system therefore may also be involved in transport. This family consists of a protein nearly always found in operons with the genes of the tol-pal system. The significance of this thioesterase to the tol-pal system is unclear, but either of two observations may be relevant. First, Pal, or peptidoglycan-associated lipoprotein, has a conserved N-terminal cleavage and acylation that makes it a lipoprotein. Second, the tol-pal system is implicated not only in the import o
Probab=93.87 E-value=0.6 Score=36.26 Aligned_cols=51 Identities=12% Similarity=0.166 Sum_probs=37.9
Q ss_pred ccEEEEEEEECcCCCCCCEEEEEEEEEC---cEEEEEEEEecCCceEEEEEEEE
Q 021701 252 NMVKNIFSRFLLHVYPGETLVTEMWLQG---LRVIYQVKVKERNRSALSGFVDV 302 (309)
Q Consensus 252 ~~~~~~~~rf~~pv~~gdtl~~~~~~~~---~~v~~~~~~~~~g~~v~~g~a~v 302 (309)
..+.+..++|.+|+..||+|.++.|+.. ....+...+..+|+.+..|..+.
T Consensus 53 ~vv~~~~i~y~~~~~~gd~v~v~~~v~~~~~~~~~~~~~i~~~g~~~a~~~~~~ 106 (126)
T TIGR02799 53 FVVRSMELDYLKPARLDDLLTVTTRVVELKGASLVFAQEVRRGDTLLCEATVEV 106 (126)
T ss_pred EEEEEEEEEEcCcccCCCEEEEEEEEEecCceEEEEEEEEEeCCEEEEEEEEEE
Confidence 3556889999999999999999999853 24444444445688888887653
No 90
>PRK10293 acyl-CoA esterase; Provisional
Probab=93.86 E-value=1.3 Score=35.55 Aligned_cols=78 Identities=14% Similarity=0.103 Sum_probs=51.3
Q ss_pred CCceechHhHHHHHHHHHH---Hhhhc-CCCccEEEEEEEECcCCCCCCEEEEEEEEE--Cc-EEEEEEEE-ecCCceEE
Q 021701 225 SRPILHGLCTMGFAVRAII---KFICR-GDPNMVKNIFSRFLLHVYPGETLVTEMWLQ--GL-RVIYQVKV-KERNRSAL 296 (309)
Q Consensus 225 ~~~i~hG~~~~~~~~~~~~---~~~~~-g~~~~~~~~~~rf~~pv~~gdtl~~~~~~~--~~-~v~~~~~~-~~~g~~v~ 296 (309)
+.-++||-..++++-.... ....+ +....=.++++.|.+|+..| +|+++.++. |. ...+++.+ +++|+++.
T Consensus 49 ~~G~lHGGv~~tLaD~a~~~a~~~~~~~~~~~vTiel~infl~p~~~g-~l~a~a~vv~~Gr~~~~~~~~v~d~~g~l~A 127 (136)
T PRK10293 49 PFGLLHGGASVVLAESIGSVAGYLCTEGEQKVVGLEINANHVRSAREG-RVRGVCKPLHLGSRHQVWQIEIFDEKGRLCC 127 (136)
T ss_pred CcCcccHHHHHHHHHHHHHHHHHhcccCCceEEEEEEEeEEecccCCc-eEEEEEEEEecCCCEEEEEEEEEeCCCCEEE
Confidence 4568999998888753321 11111 11222246889999999987 699988863 43 44556665 67899998
Q ss_pred EEEEEEE
Q 021701 297 SGFVDVH 303 (309)
Q Consensus 297 ~g~a~v~ 303 (309)
.+..+..
T Consensus 128 ~~~~t~~ 134 (136)
T PRK10293 128 SSRLTTA 134 (136)
T ss_pred EEEEEEE
Confidence 8887764
No 91
>PRK10254 thioesterase; Provisional
Probab=93.83 E-value=0.94 Score=36.42 Aligned_cols=60 Identities=13% Similarity=0.155 Sum_probs=45.3
Q ss_pred ceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEec
Q 021701 91 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRG 156 (309)
Q Consensus 91 ~~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg 156 (309)
...+=.+-++.|++|...| .|.+++++. |....+.+.+.+++ +++|++++..+.|..+.|
T Consensus 78 ~~~vTiel~in~Lrp~~~g-~l~a~a~vi----~~Gr~~~v~~~~v~-d~~g~l~a~~~~t~~i~~ 137 (137)
T PRK10254 78 QCVVGTELNATHHRPVSEG-KVRGVCQPL----HLGRQNQSWEIVVF-DEQGRRCCTCRLGTAVLG 137 (137)
T ss_pred CeEEEEEEEeEEeccCcCC-eEEEEEEEE----ecCcCEEEEEEEEE-cCCCCEEEEEEEEEEEeC
Confidence 3467778999999999877 798888854 22234556666765 689999999999987754
No 92
>TIGR02799 thio_ybgC tol-pal system-associated acyl-CoA thioesterase. The tol-pal system consists of five critical genes. Inner membrane proteins TolQ and TolR convert protomotive force to energy that is transduced through TolA to an outer membrane complex of TolB and Pal. The system is known to be required to maintain outer membrane integrity. In a system with several homologous parts, ExbB and ExbD transduces energy through TonB to a variety of outer membrane proteins, many of which are siderophore receptors. The tol-pal system therefore may also be involved in transport. This family consists of a protein nearly always found in operons with the genes of the tol-pal system. The significance of this thioesterase to the tol-pal system is unclear, but either of two observations may be relevant. First, Pal, or peptidoglycan-associated lipoprotein, has a conserved N-terminal cleavage and acylation that makes it a lipoprotein. Second, the tol-pal system is implicated not only in the import o
Probab=93.73 E-value=1.4 Score=34.19 Aligned_cols=60 Identities=13% Similarity=0.165 Sum_probs=46.3
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEecc
Q 021701 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGA 157 (309)
Q Consensus 92 ~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg~ 157 (309)
..+=.+.+++|++|++.||++.+++++..+..+ .+.+..+++ .+|+++++..++.+....
T Consensus 52 ~~vv~~~~i~y~~~~~~gd~v~v~~~v~~~~~~----~~~~~~~i~--~~g~~~a~~~~~~v~vd~ 111 (126)
T TIGR02799 52 VFVVRSMELDYLKPARLDDLLTVTTRVVELKGA----SLVFAQEVR--RGDTLLCEATVEVACVDA 111 (126)
T ss_pred EEEEEEEEEEEcCcccCCCEEEEEEEEEecCce----EEEEEEEEE--eCCEEEEEEEEEEEEEEC
Confidence 456678999999999999999999999876532 344555554 368999999998877643
No 93
>PRK10254 thioesterase; Provisional
Probab=93.50 E-value=2 Score=34.53 Aligned_cols=77 Identities=16% Similarity=0.098 Sum_probs=50.8
Q ss_pred CceechHhHHHHHHHHH---HHhhhc-CCCccEEEEEEEECcCCCCCCEEEEEEEEE--Cc-EEEEEEEE-ecCCceEEE
Q 021701 226 RPILHGLCTMGFAVRAI---IKFICR-GDPNMVKNIFSRFLLHVYPGETLVTEMWLQ--GL-RVIYQVKV-KERNRSALS 297 (309)
Q Consensus 226 ~~i~hG~~~~~~~~~~~---~~~~~~-g~~~~~~~~~~rf~~pv~~gdtl~~~~~~~--~~-~v~~~~~~-~~~g~~v~~ 297 (309)
.-++||-..++++-.+. .....+ +....=..+++.|.+|+..| +|+++.++. |. ...+++.+ +++|+++..
T Consensus 50 ~G~vHGGv~~tLaD~a~g~A~~~~~~~g~~~vTiel~in~Lrp~~~g-~l~a~a~vi~~Gr~~~v~~~~v~d~~g~l~a~ 128 (137)
T PRK10254 50 FGLLHGGASAALAETLGSMAGFLMTRDGQCVVGTELNATHHRPVSEG-KVRGVCQPLHLGRQNQSWEIVVFDEQGRRCCT 128 (137)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhCCCCCeEEEEEEEeEEeccCcCC-eEEEEEEEEecCcCEEEEEEEEEcCCCCEEEE
Confidence 46899999999885332 111111 22222236788999999877 799988863 43 44566665 678999888
Q ss_pred EEEEEE
Q 021701 298 GFVDVH 303 (309)
Q Consensus 298 g~a~v~ 303 (309)
+..+..
T Consensus 129 ~~~t~~ 134 (137)
T PRK10254 129 CRLGTA 134 (137)
T ss_pred EEEEEE
Confidence 877654
No 94
>COG2050 PaaI HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.41 E-value=0.87 Score=36.58 Aligned_cols=57 Identities=19% Similarity=0.287 Sum_probs=43.1
Q ss_pred eeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEe
Q 021701 94 LHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLR 155 (309)
Q Consensus 94 vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~r 155 (309)
+=.+-.+.|.||.+.|+ +++++++... |+ .+.+.+.+++.++.|++++..+.|+++.
T Consensus 81 ~ti~l~i~flr~~~~g~-v~a~a~v~~~---G~-~~~v~~i~v~~~~~~~lva~~~~t~~v~ 137 (141)
T COG2050 81 VTLELNINFLRPVKEGD-VTAEARVLHL---GR-RVAVVEIEVKNDEGGRLVAKGTGTYAVL 137 (141)
T ss_pred EEEEEEehhccCCCCCe-EEEEEEEEee---CC-EEEEEEEEEEECCCCeEEEEEEEEEEEe
Confidence 33478899999999999 9999999877 32 2233555554456779999999998774
No 95
>PLN02322 acyl-CoA thioesterase
Probab=93.37 E-value=2 Score=35.31 Aligned_cols=79 Identities=16% Similarity=0.019 Sum_probs=48.6
Q ss_pred CCceechHhHHHHHHHHHH-Hhhhc--CCCccEEEEEEEECcCCCCCCEEEEEEEEE--Cc-EEEEEEEE-ec------C
Q 021701 225 SRPILHGLCTMGFAVRAII-KFICR--GDPNMVKNIFSRFLLHVYPGETLVTEMWLQ--GL-RVIYQVKV-KE------R 291 (309)
Q Consensus 225 ~~~i~hG~~~~~~~~~~~~-~~~~~--g~~~~~~~~~~rf~~pv~~gdtl~~~~~~~--~~-~v~~~~~~-~~------~ 291 (309)
+.-++||-..++++-.+.. ...+. +....=..+++.|.+|+..|++|+++.++. |. ...+++++ ++ .
T Consensus 41 ~~G~vHGGv~atLaDta~g~A~~~~~~~~~~vTiel~infLrpa~~G~~L~Aea~vv~~Gr~~~~~ev~V~~~~~~~~~~ 120 (154)
T PLN02322 41 PFKVLHGGVSALIAESLASLGAHMASGFKRVAGIQLSINHLKSADLGDLVFAEATPVSTGKTIQVWEVKLWKTTDKDKAN 120 (154)
T ss_pred CCCCccHHHHHHHHHHHHHHHHhhccCCCceEEEEEEEEEeccCCCCCEEEEEEEEEecCCCEEEEEEEEEECCCCcccC
Confidence 3468999999998853311 11111 112222468899999999999999998874 43 33344443 31 2
Q ss_pred CceEEEEEEEEE
Q 021701 292 NRSALSGFVDVH 303 (309)
Q Consensus 292 g~~v~~g~a~v~ 303 (309)
|+.+..+..++.
T Consensus 121 ~~lva~a~~T~~ 132 (154)
T PLN02322 121 KILISSSRVTLI 132 (154)
T ss_pred CeEEEEEEEEEE
Confidence 566666766653
No 96
>PF07977 FabA: FabA-like domain; InterPro: IPR013114 Fatty acids biosynthesis occurs by two distinct pathways: in fungi, mammals and mycobacteria, type I or associative fatty-acid biosynthesis (type I FAS) is accomplished by multifunctional proteins in which distinct domains catalyse specific reactions; in plants and most bacteria, type II or dissociative fatty-acid biosynthesis (type II FAS) is accomplished by distinct enzymes []. Both FabZ and FabA catalyse the dehydration of beta-hydroxyacyl acyl carrier protein (ACP) to trans 2-enoyl ACP. However, FabZ and FabA display subtle differences in substrate specificities, whereby FabA is most effective on acyl ACPs of 9-11 carbon atoms in length, while FabZ is less specific. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains. This enzyme domain has a HotDog fold.; PDB: 3D6X_F 2GLV_J 2GLM_E 2GLP_E 2GLL_C 1U1Z_F 3ESI_A 3AZB_T 3AZA_M 3AZ9_U ....
Probab=93.29 E-value=0.36 Score=38.64 Aligned_cols=54 Identities=19% Similarity=0.319 Sum_probs=38.3
Q ss_pred eeeeeeEEEEEeccCCCCc-EEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEE
Q 021701 92 LLLHGQQYMELYKPFPSSA-SIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMN 148 (309)
Q Consensus 92 ~~vH~~q~~~~~~Pl~~gd-~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~ 148 (309)
..+-+-.+++|++|+.+|+ +|+.++++..+.+...+ +...+.+++ .+|++|++.
T Consensus 83 ~~l~~~~~~kF~~~v~Pg~~~l~~~v~i~~~~~~~~~-~~~~~~~~~--vdg~~v~~~ 137 (138)
T PF07977_consen 83 PFLAGIRNVKFRGPVYPGDKTLRIEVEIKKIRRREGG-MAIFDGTAY--VDGELVAEA 137 (138)
T ss_dssp EEEEEEEEEEE-S-B-TTE-EEEEEEEEEEEEEEETT-EEEEEEEEE--ETTEEEEEE
T ss_pred EEeccccEEEECccEeCCCcEEEEEEEEEEeecccCC-EEEEEEEEE--ECCEEEEEE
Confidence 4577899999999999999 99999999998554443 233444443 478999875
No 97
>PF01643 Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR002864 This entry represents various acyl-acyl carrier protein (ACP) thioesterases (TE) which terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid []. These proteins contain a duplication of two 4HBT-like domains.; GO: 0016790 thiolester hydrolase activity, 0006633 fatty acid biosynthetic process; PDB: 2ESS_A 2OWN_A.
Probab=93.22 E-value=2.9 Score=37.30 Aligned_cols=60 Identities=18% Similarity=0.131 Sum_probs=41.8
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEEC-CCCcEEEEEEEEEEEecc
Q 021701 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNA-ESGELLCMNRMTAFLRGA 157 (309)
Q Consensus 93 ~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~-~~Ge~v~~~~~t~~~rg~ 157 (309)
-|-....++++|+..-||++++++++.+.. +.+..-..+++ + ++|+++++..+.+++-..
T Consensus 61 Wvl~r~~i~i~r~P~~~e~i~i~Tw~~~~~----~~~~~R~f~i~-d~~~G~~l~~a~s~WvliD~ 121 (261)
T PF01643_consen 61 WVLSRYQIEIHRYPRWGEKITIETWPSGFK----RFFAYRDFEIY-DAEDGELLARATSIWVLIDL 121 (261)
T ss_dssp EEEEEEEEEESS--BTT-EEEEEEEEEEE-----SSEEEEEEEEE---TTS-EEEEEEEEEEEEET
T ss_pred EEEEEEEEEEEecCCCCCEEEEEEEeccCC----CcEEEEEEEEE-ECCCCcEEEEEEEEEEEEEh
Confidence 366689999999999999999999998854 23334444543 5 799999999999987543
No 98
>COG0824 FcbC Predicted thioesterase [General function prediction only]
Probab=93.15 E-value=2 Score=34.43 Aligned_cols=59 Identities=15% Similarity=0.153 Sum_probs=47.3
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEecc
Q 021701 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGA 157 (309)
Q Consensus 93 ~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg~ 157 (309)
.+=.+.+++|++|+..||.+++++++..+..+ -+++..++. +++ +++++.+.+.+.-..
T Consensus 57 ~~v~~~~i~y~~p~~~~d~l~v~~~v~~~~~~----s~~~~~~i~-~~~-~l~a~~~~~~V~v~~ 115 (137)
T COG0824 57 FVVVEAEIDYLRPARLGDVLTVRTRVEELGGK----SLTLGYEIV-NED-ELLATGETTLVCVDL 115 (137)
T ss_pred EEEEEEEeEECCCccCCCEEEEEEEEEeecCe----EEEEEEEEE-eCC-EEEEEEEEEEEEEEC
Confidence 56678999999999999999999999887543 356666764 344 999999999888654
No 99
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=92.84 E-value=1.3 Score=40.24 Aligned_cols=80 Identities=13% Similarity=0.087 Sum_probs=61.3
Q ss_pred CceechHhHHHHHHHHHHHhhhcCCCccEEEEEEEECcCCCCCCEEEEEEEE--ECc-EEEEEEEEecCCceEEEEEEEE
Q 021701 226 RPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWL--QGL-RVIYQVKVKERNRSALSGFVDV 302 (309)
Q Consensus 226 ~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~pv~~gdtl~~~~~~--~~~-~v~~~~~~~~~g~~v~~g~a~v 302 (309)
..-+.|-+++|.+..+..+.. .+...+.++.+.|.+|.-++..+..++++ +|. ..+.+++..|+|+++++..+.+
T Consensus 31 ~r~~fGGqv~AQal~AA~~tv--~~~~~~hSlh~~Fl~pg~~~~pi~y~Ve~lRdGRSfstr~V~a~Q~g~~if~~~~sF 108 (286)
T PRK10526 31 LRQVFGGQVVGQALYAAKETV--PEERLVHSFHSYFLRPGDSQKPIIYDVETLRDGNSFSARRVAAIQNGKPIFYMTASF 108 (286)
T ss_pred CCceechHHHHHHHHHHHhcC--CCCCCceEEEEEcCCCCCCCCCEEEEEEEEeCCCceEeEEEEEEECCEEEEEEEEEe
Confidence 456899999998887766654 23456789999999999999988888876 454 3444555679999999999888
Q ss_pred EeccC
Q 021701 303 HRLAS 307 (309)
Q Consensus 303 ~~p~~ 307 (309)
..+.+
T Consensus 109 ~~~e~ 113 (286)
T PRK10526 109 QAPEA 113 (286)
T ss_pred ccCCC
Confidence 76654
No 100
>PRK10293 acyl-CoA esterase; Provisional
Probab=92.63 E-value=1.6 Score=34.99 Aligned_cols=57 Identities=12% Similarity=0.110 Sum_probs=43.3
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021701 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 154 (309)
Q Consensus 92 ~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 154 (309)
..+=.+-++.|.+|.+.| .|++++++.. ....+...+.+++ |++|++++..+.|+.+
T Consensus 79 ~~vTiel~infl~p~~~g-~l~a~a~vv~----~Gr~~~~~~~~v~-d~~g~l~A~~~~t~~i 135 (136)
T PRK10293 79 KVVGLEINANHVRSAREG-RVRGVCKPLH----LGSRHQVWQIEIF-DEKGRLCCSSRLTTAI 135 (136)
T ss_pred eEEEEEEEeEEecccCCc-eEEEEEEEEe----cCCCEEEEEEEEE-eCCCCEEEEEEEEEEE
Confidence 456778999999999877 6888886653 2234556666765 6789999999999865
No 101
>cd01287 FabA FabA, beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase: Bacterial protein of the type II, fatty acid synthase system that binds ACP and catalyzes both dehydration and isomerization reactions, apparently in the same active site. The FabA structure is a homodimer with two independent active sites located at the dimer interface. Each active site is tunnel-shaped and completely inaccessible to solvent. No metal ions or cofactors are required for ligand binding or catalysis.
Probab=92.60 E-value=1 Score=36.84 Aligned_cols=60 Identities=10% Similarity=0.060 Sum_probs=46.6
Q ss_pred eeeeeeEEEEEeccCCCCc-EEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEE
Q 021701 92 LLLHGQQYMELYKPFPSSA-SIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 153 (309)
Q Consensus 92 ~~vH~~q~~~~~~Pl~~gd-~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~ 153 (309)
..+-+-++++|++|+.+|| +|+.+++|..+...+.+.++..+..++ .+|+++++....-+
T Consensus 85 ~~l~~~~~~kfr~~v~Pgd~~l~~e~~i~~~~~~~~~~~~~~~~~~~--vdg~~v~~a~~~~~ 145 (150)
T cd01287 85 GAPGGPGEWKYRGQITPHNKKVTYEVHIKEVGRDGPRPYIIADASLW--VDGLRIYEAKDIAV 145 (150)
T ss_pred eEeccceEEEECccCcCCCEEEEEEEEEEEEEccCCccEEEEEEEEE--ECCEEEEEEEccEE
Confidence 3455667899999999999 899999999998755555566666654 47999998876544
No 102
>TIGR00051 acyl-CoA thioester hydrolase, YbgC/YbaW family. This model describes a subset of related acyl-CoA thioesterases that include several at least partially characterized proteins. YbgC is an acyl-CoA thioesterase associated with the Tol-Pal system. YbaW is part of the FadM regulon.
Probab=92.21 E-value=2 Score=32.53 Aligned_cols=57 Identities=14% Similarity=0.116 Sum_probs=40.2
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021701 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 154 (309)
Q Consensus 93 ~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 154 (309)
.+=.+.++.|++|+..||++++++++..+..+ .+.+..+++ +.+|++++...++.+.
T Consensus 49 ~~v~~~~i~y~~~~~~gd~v~v~~~~~~~~~~----s~~~~~~i~-~~~~~~~~~~~~~~v~ 105 (117)
T TIGR00051 49 FVVVNINIEYKKPARLDDVLEIRTQIEELNGF----SFVFSQEIF-NEDEALLKAATVIVVC 105 (117)
T ss_pred EEEEEEEEEECCcccCCCEEEEEEEEEecCcE----EEEEEEEEE-eCCCcEEEeeEEEEEE
Confidence 35557899999999999999999999987432 244555554 4566666666554433
No 103
>PLN02322 acyl-CoA thioesterase
Probab=92.16 E-value=2 Score=35.28 Aligned_cols=60 Identities=17% Similarity=0.067 Sum_probs=43.5
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEEC----C-CCcEEEEEEEEEEEe
Q 021701 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNA----E-SGELLCMNRMTAFLR 155 (309)
Q Consensus 92 ~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~----~-~Ge~v~~~~~t~~~r 155 (309)
..+=.+-++.|++|.+.|+.|.+++++.. ....+...+.++++. + +|.+++..+.|+.+.
T Consensus 70 ~~vTiel~infLrpa~~G~~L~Aea~vv~----~Gr~~~~~ev~V~~~~~~~~~~~~lva~a~~T~~~~ 134 (154)
T PLN02322 70 RVAGIQLSINHLKSADLGDLVFAEATPVS----TGKTIQVWEVKLWKTTDKDKANKILISSSRVTLICN 134 (154)
T ss_pred ceEEEEEEEEEeccCCCCCEEEEEEEEEe----cCCCEEEEEEEEEECCCCcccCCeEEEEEEEEEEEc
Confidence 35777899999999999999999997753 223344555565532 1 378999999998653
No 104
>cd00556 Thioesterase_II Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=91.86 E-value=1.1 Score=32.97 Aligned_cols=56 Identities=11% Similarity=0.123 Sum_probs=40.8
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEE
Q 021701 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 153 (309)
Q Consensus 93 ~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~ 153 (309)
..-.+..+.|++|...++.+..++++.. .+++ +...+.+++ +++|+++++..++++
T Consensus 43 ~~t~~~~i~F~~~~~~~~~~~~~~~~~~---~g~~-~~~~~~~i~-~~~G~lva~~~~~~~ 98 (99)
T cd00556 43 FASLDHHIYFHRPGDADEWLLYEVESLR---DGRS-RALRRGRAY-QRDGKLVASATQSFL 98 (99)
T ss_pred eeeeEEEEEEcCCCCCCccEEEEEEecc---cCCC-ceEEEEEEE-CCCCcEEEEEEEeEc
Confidence 3556789999999999998888777643 2333 345555654 567999999998864
No 105
>PF13279 4HBT_2: Thioesterase-like superfamily; PDB: 2W3X_E 3CK1_A 2GF6_C 2NUJ_A 2HLJ_A 2XFL_B 2XEM_B 2OIW_B 2HX5_A 2FUJ_A ....
Probab=91.35 E-value=2.2 Score=32.81 Aligned_cols=51 Identities=16% Similarity=0.209 Sum_probs=33.8
Q ss_pred ccEEEEEEEECcCCCCCCEEEEEEEEE---CcEEEEEEEE--ecCCce--EEEEEEEE
Q 021701 252 NMVKNIFSRFLLHVYPGETLVTEMWLQ---GLRVIYQVKV--KERNRS--ALSGFVDV 302 (309)
Q Consensus 252 ~~~~~~~~rf~~pv~~gdtl~~~~~~~---~~~v~~~~~~--~~~g~~--v~~g~a~v 302 (309)
..+.+.+++|.+|+..||++.++.+.. +..+.+...+ +++|+. +.+|..+.
T Consensus 44 ~~v~~~~i~y~~~~~~~d~~~v~~~~~~~~~~s~~~~~~i~~~~~g~~~~~a~~~~~~ 101 (121)
T PF13279_consen 44 FVVAESEIDYLRPLRFGDRLEVETRVEEIGGKSFRFEQEIFRPADGKGELAATGRTVM 101 (121)
T ss_dssp EEEEEEEEEE-S--BTTSEEEEEEEEEEEESSEEEEEEEEEECSTTEEEEEEEEEEEE
T ss_pred EEEEEEEEEEcccccCCCEEEEEEEEEEECCcEEEEEEEEEEcCCCceEEEEEEEEEE
Confidence 356789999999999999999988863 3466666654 335655 66666543
No 106
>cd00493 FabA_FabZ FabA/Z, beta-hydroxyacyl-acyl carrier protein (ACP)-dehydratases: One of several distinct enzyme types of the dissociative, type II, fatty acid synthase system (found in bacteria and plants) required to complete successive cycles of fatty acid elongation. The third step of the elongation cycle, the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, is catalyzed by FabA or FabZ. FabA is bifunctional and catalyzes an additional isomerization reaction of trans-2-acyl-ACP to cis-3-acyl-ACP, an essential reaction to unsaturated fatty acid synthesis. FabZ is the primary dehydratase that participates in the elongation cycles of saturated as well as unsaturated fatty acid biosynthesis, whereas FabA is more active in the dehydration of beta-hydroxydecanoyl-ACP. The FabA structure is homodimeric with two independent active sites located at the dimer interface.
Probab=91.28 E-value=2.3 Score=33.03 Aligned_cols=52 Identities=13% Similarity=0.275 Sum_probs=39.8
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEE
Q 021701 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNR 149 (309)
Q Consensus 92 ~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~ 149 (309)
..+-+-++++|++|+.+||+|++++++..... | ++.+..+++ + +|+++++.+
T Consensus 75 ~~l~~~~~~kf~~~v~pgd~l~i~~~i~~~~~---~-~~~~~~~~~-~-~g~~v~~~~ 126 (131)
T cd00493 75 GYLAGVRKVKFRGPVLPGDTLTLEVELLKVRR---G-LGKFDGRAY-V-DGKLVAEAE 126 (131)
T ss_pred EEEEEcceeEECCCcCCCCEEEEEEEEEEeeC---C-EEEEEEEEE-E-CCEEEEEEE
Confidence 45666789999999999999999999987664 2 345555543 2 589998887
No 107
>PRK13188 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed
Probab=91.24 E-value=1.5 Score=42.44 Aligned_cols=58 Identities=12% Similarity=0.238 Sum_probs=45.0
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEe
Q 021701 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLR 155 (309)
Q Consensus 93 ~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~r 155 (309)
.+=+-.+++|++|+.+||+|++++++..... +| ++.++.+++ ++|++|++.+..+++.
T Consensus 403 ~LlgI~kvKF~~PV~PGDtL~I~veI~~~~~--~g-iv~f~g~~~--vdGelVaeael~~~v~ 460 (464)
T PRK13188 403 YFMKIDKVKFRQKVVPGDTLIFKVELLSPIR--RG-ICQMQGKAY--VNGKLVCEAELMAQIV 460 (464)
T ss_pred EEEeccEEEEcCCCCCCCEEEEEEEEEEEec--CC-EEEEEEEEE--ECCEEEEEEEEEEEEe
Confidence 4444579999999999999999999887443 33 455666653 6899999999998774
No 108
>COG1607 Acyl-CoA hydrolase [Lipid metabolism]
Probab=90.96 E-value=5.2 Score=32.94 Aligned_cols=50 Identities=12% Similarity=-0.021 Sum_probs=31.4
Q ss_pred echHhHHHHHHHH---HHHhhhcCCCccEEEEEEEECcCCCCCCEEEEEEEEE
Q 021701 229 LHGLCTMGFAVRA---IIKFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWLQ 278 (309)
Q Consensus 229 ~hG~~~~~~~~~~---~~~~~~~g~~~~~~~~~~rf~~pv~~gdtl~~~~~~~ 278 (309)
+||-+.++++-.. .....+.+......--++.|.+||+.||.|.+..++.
T Consensus 31 ifGG~lm~~mD~~a~i~A~~~a~~~vVTasvd~v~F~~Pv~vGd~v~~~a~v~ 83 (157)
T COG1607 31 IFGGWLLSWMDLAAAIAASRHAGGRVVTASVDSVDFKKPVRVGDIVCLYARVV 83 (157)
T ss_pred cccHHHHHHHHHHHHHHHHHHhCCeEEEEEeceEEEccccccCcEEEEEEEEe
Confidence 5666666665421 1122334432222234699999999999999999874
No 109
>PRK10694 acyl-CoA esterase; Provisional
Probab=90.62 E-value=5.7 Score=31.66 Aligned_cols=50 Identities=16% Similarity=-0.026 Sum_probs=32.5
Q ss_pred eechHhHHHHHHHHH---HHhhhcCCCccEEEE-EEEECcCCCCCCEEEEEEEEE
Q 021701 228 ILHGLCTMGFAVRAI---IKFICRGDPNMVKNI-FSRFLLHVYPGETLVTEMWLQ 278 (309)
Q Consensus 228 i~hG~~~~~~~~~~~---~~~~~~g~~~~~~~~-~~rf~~pv~~gdtl~~~~~~~ 278 (309)
.+||-..+.++-... ...++ +......++ .+.|.+|++.||.|.++.++.
T Consensus 28 ~lfGG~ll~~~D~~a~i~a~~~~-~~~~vtv~vd~i~F~~Pv~~Gd~l~~~a~V~ 81 (133)
T PRK10694 28 DIFGGWLMSQMDIGGAILAKEIA-HGRVVTVRVEGMTFLRPVAVGDVVCCYARCV 81 (133)
T ss_pred cEeHHHHHHHHHHHHHHHHHHHc-CCceEEEEECceEECCCcccCcEEEEEEEEE
Confidence 567766666644211 11222 333445566 569999999999999998874
No 110
>TIGR00051 acyl-CoA thioester hydrolase, YbgC/YbaW family. This model describes a subset of related acyl-CoA thioesterases that include several at least partially characterized proteins. YbgC is an acyl-CoA thioesterase associated with the Tol-Pal system. YbaW is part of the FadM regulon.
Probab=90.06 E-value=2.8 Score=31.70 Aligned_cols=48 Identities=10% Similarity=0.113 Sum_probs=33.5
Q ss_pred ccEEEEEEEECcCCCCCCEEEEEEEEEC---cEEEEEEEE-ecCCceEEEEE
Q 021701 252 NMVKNIFSRFLLHVYPGETLVTEMWLQG---LRVIYQVKV-KERNRSALSGF 299 (309)
Q Consensus 252 ~~~~~~~~rf~~pv~~gdtl~~~~~~~~---~~v~~~~~~-~~~g~~v~~g~ 299 (309)
..+.+.+++|.+|+..||+|.++.|... ..+.+...+ +++++.+..+.
T Consensus 49 ~~v~~~~i~y~~~~~~gd~v~v~~~~~~~~~~s~~~~~~i~~~~~~~~~~~~ 100 (117)
T TIGR00051 49 FVVVNINIEYKKPARLDDVLEIRTQIEELNGFSFVFSQEIFNEDEALLKAAT 100 (117)
T ss_pred EEEEEEEEEECCcccCCCEEEEEEEEEecCcEEEEEEEEEEeCCCcEEEeeE
Confidence 3567899999999999999999999853 244555443 44555444443
No 111
>PLN02370 acyl-ACP thioesterase
Probab=89.37 E-value=21 Score=34.31 Aligned_cols=61 Identities=5% Similarity=-0.012 Sum_probs=46.9
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEec
Q 021701 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRG 156 (309)
Q Consensus 92 ~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg 156 (309)
..|-...+++++||..-||+|++++++.++ + +..+..+.++++..+|+++++..+++++-.
T Consensus 196 ~WVLtr~~I~~~R~P~~gD~V~V~Twv~~~--~--k~~~~Rdf~I~D~~~Ge~la~A~SvWV~mD 256 (419)
T PLN02370 196 IWVVTRMQVLVDRYPTWGDVVQVDTWVSAS--G--KNGMRRDWLVRDCKTGETLTRASSVWVMMN 256 (419)
T ss_pred eEEEEEEEEEeCcCCCCCCEEEEEEEEeeC--C--CCEEEEEEEEEECCCCeEEEEEEEEEEEEE
Confidence 457779999999999999999999999886 2 222334555543347999999999988754
No 112
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=89.19 E-value=4.4 Score=39.82 Aligned_cols=60 Identities=10% Similarity=0.083 Sum_probs=47.7
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEec
Q 021701 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRG 156 (309)
Q Consensus 92 ~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg 156 (309)
..+=.+.+++|++|++.||++++++++..+.. ..+.++.+++ +.+|+++++..++++.-.
T Consensus 395 ~~vvv~~~i~y~rp~~~gD~v~I~t~v~~~~~----~s~~~~~~i~-~~~g~l~A~g~~~~v~vD 454 (495)
T PRK07531 395 SYYTVETHIRHLGEAKAGQALHVETQLLSGDE----KRLHLFHTLY-DAGGELIATAEHMLLHVD 454 (495)
T ss_pred cEEEEEEEEEEcccCCCCCEEEEEEEEEecCC----cEEEEEEEEE-CCCCcEEEEEEEEEEEEE
Confidence 34557999999999999999999999987743 3355566655 568999999999887754
No 113
>COG1607 Acyl-CoA hydrolase [Lipid metabolism]
Probab=88.80 E-value=4.3 Score=33.43 Aligned_cols=60 Identities=10% Similarity=0.005 Sum_probs=39.9
Q ss_pred EEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEecc
Q 021701 98 QYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGA 157 (309)
Q Consensus 98 q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg~ 157 (309)
.++.|.+|++.||.+.+.+++..+-...--+.+.+..+-...+.-+.+.....+++.-..
T Consensus 62 d~v~F~~Pv~vGd~v~~~a~v~~~GrTSm~V~Vev~~~~~~~~~~~~~t~~~ft~VAvd~ 121 (157)
T COG1607 62 DSVDFKKPVRVGDIVCLYARVVYTGRTSMEVGVEVWAEDIRSGERRLATSAYFTFVAVDE 121 (157)
T ss_pred ceEEEccccccCcEEEEEEEEeecCcccEEEEEEEEEecccCCcceEeeeEEEEEEEECC
Confidence 578999999999999999999876544322333444332223444556677777776654
No 114
>TIGR02447 yiiD_Cterm thioesterase domain, putative. This family consists of a broadly distributed uncharacterized domain found often as a standalone protein. The member from Shewanella oneidensis, PDB|1T82_A (Forouhar, et al., unpublished) is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an Acetyltransf_1 domain (PFAM model pfam00583). The function of this protein is unknown.
Probab=88.77 E-value=6.7 Score=31.40 Aligned_cols=53 Identities=15% Similarity=0.055 Sum_probs=34.0
Q ss_pred CccEEEEEEEECcCCCCCCEEEEEEEE------------ECc--EEEEEEEEecCCceEEEEEEEEE
Q 021701 251 PNMVKNIFSRFLLHVYPGETLVTEMWL------------QGL--RVIYQVKVKERNRSALSGFVDVH 303 (309)
Q Consensus 251 ~~~~~~~~~rf~~pv~~gdtl~~~~~~------------~~~--~v~~~~~~~~~g~~v~~g~a~v~ 303 (309)
.....+.+++|.+|+.-+-..++++.. .+| .+.+++.+.++|+.+.++..+..
T Consensus 69 ~~vt~~~~i~yl~P~~~~~~a~~~~~~~~~~~~~~~~l~~~gr~~~~~~~~v~~~~~lvA~~~g~~~ 135 (138)
T TIGR02447 69 DIVIADSHIRYLAPVTGDPVANCEAPDLESWEAFLATLQRGGKARVKLEAQISSDGKLAATFSGEYV 135 (138)
T ss_pred cEEEEEeeeEEcCCcCCCeEEEEEcCCHHHHHHHHHHHHhCCceEEEEEEEEEECCEEEEEEEEEEE
Confidence 345567899999999864344555421 122 45566666678888887766543
No 115
>KOG1206 consensus Peroxisomal multifunctional beta-oxidation protein and related enzymes [Lipid transport and metabolism]
Probab=88.52 E-value=0.11 Score=45.05 Aligned_cols=79 Identities=15% Similarity=0.102 Sum_probs=50.5
Q ss_pred EEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCeeeee-cccCcCCCCCCCCCCCCCCCceeeeeeEEE
Q 021701 22 FTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSAL-FSFELEPSGAIDLPGLQHDPRLLLHGQQYM 100 (309)
Q Consensus 22 ~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPtf~~~-l~~~~~~~~~~~~~~~~~~~~~~vH~~q~~ 100 (309)
-..|.+|+..|++--| |.||||.|..-+ ..+||+.-++.- .+ +++-. + +-+-.+ ..-+.-+|++
T Consensus 157 ~~~ts~DqaAlyrlsg--D~NPLHiDPe~A--~~agFetpilHG---lc~lg~~~---r---iv~a~~--~~a~y~~~kv 221 (272)
T KOG1206|consen 157 ERFTSEDQAALYRLSG--DHNPLHIDPESA--LEAGFETPILHG---LCTLGFSA---R---IVGAQF--PPAVYKAQKV 221 (272)
T ss_pred eecchhhHHHHHHhcC--CCCccccCHHHH--HhcCCCCchhhh---HHHhhhhH---H---HHHHhc--Cchhhheeee
Confidence 3678899999998888 899998877555 444555444322 22 22211 0 000011 1347778999
Q ss_pred EEeccCCCCcEEEEE
Q 021701 101 ELYKPFPSSASIRNE 115 (309)
Q Consensus 101 ~~~~Pl~~gd~l~~~ 115 (309)
+|..|+.+|++|...
T Consensus 222 rF~spV~pGdtll~~ 236 (272)
T KOG1206|consen 222 RFSSPVGPGDTLLVL 236 (272)
T ss_pred eecCCCCCchhHHHH
Confidence 999999999988643
No 116
>KOG3328 consensus HGG motif-containing thioesterase [General function prediction only]
Probab=86.31 E-value=6.6 Score=31.83 Aligned_cols=75 Identities=17% Similarity=0.150 Sum_probs=49.4
Q ss_pred ceechHhHHHHHHHHHHH--hhh-cCCCccEEEEEEEECcCCCCCCEEEEEEEE--ECcE---EEEEEEEecCCceEEEE
Q 021701 227 PILHGLCTMGFAVRAIIK--FIC-RGDPNMVKNIFSRFLLHVYPGETLVTEMWL--QGLR---VIYQVKVKERNRSALSG 298 (309)
Q Consensus 227 ~i~hG~~~~~~~~~~~~~--~~~-~g~~~~~~~~~~rf~~pv~~gdtl~~~~~~--~~~~---v~~~~~~~~~g~~v~~g 298 (309)
-.+||-+++.++-..-.. .+. +..+..-..+++.|..|..+||.|.++... .|.. +.++++.+.+|++...|
T Consensus 54 k~LHGG~tAtLvD~i~s~~~~~~~~~~~gvsvdLsvsyL~~AklGe~l~i~a~~vr~Gk~la~t~v~l~~K~t~kiia~g 133 (148)
T KOG3328|consen 54 KTLHGGATATLVDLITSAALLMTSGFKPGVSVDLSVSYLSSAKLGEELEIEATVVRVGKTLAFTDVELRRKSTGKIIAKG 133 (148)
T ss_pred ccccccchhhHHHHHhhHHHHhccCCCCceEEEEEhhhccccCCCCeEEEEEEEeecCceEEEEEEEEEEcCCCeEEEec
Confidence 357788887776432211 111 223445567899999999999999999886 3443 33445556778888887
Q ss_pred EEE
Q 021701 299 FVD 301 (309)
Q Consensus 299 ~a~ 301 (309)
..+
T Consensus 134 rht 136 (148)
T KOG3328|consen 134 RHT 136 (148)
T ss_pred ceE
Confidence 654
No 117
>PRK10694 acyl-CoA esterase; Provisional
Probab=85.71 E-value=6.1 Score=31.51 Aligned_cols=60 Identities=12% Similarity=0.003 Sum_probs=35.7
Q ss_pred EEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEE-EECCCC--cEEEEEEEEEEEecc
Q 021701 98 QYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKS-YNAESG--ELLCMNRMTAFLRGA 157 (309)
Q Consensus 98 q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~-~~~~~G--e~v~~~~~t~~~rg~ 157 (309)
..+.|++|++.||.+++.++|..+-.+.--..+.+..+. ..+..| .++.+...|++.-.+
T Consensus 60 d~i~F~~Pv~~Gd~l~~~a~V~~~g~sS~~v~v~v~~~~~~~~~~g~~~~~~~~~~tfVavd~ 122 (133)
T PRK10694 60 EGMTFLRPVAVGDVVCCYARCVKTGTTSISINIEVWVKKVASEPIGQRYKATEALFTYVAVDP 122 (133)
T ss_pred CceEECCCcccCcEEEEEEEEEEccCceEEEEEEEEEeecccCCCCcEEEEEEEEEEEEEECC
Confidence 478999999999999999999765543211112222111 012123 346677777776544
No 118
>COG1946 TesB Acyl-CoA thioesterase [Lipid metabolism]
Probab=84.89 E-value=5.6 Score=35.94 Aligned_cols=65 Identities=9% Similarity=0.080 Sum_probs=49.2
Q ss_pred CCCceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEecc
Q 021701 88 HDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGA 157 (309)
Q Consensus 88 ~~~~~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg~ 157 (309)
.+..++.-..+.+.||||.+.+|-+....+.-+...- +| -++.+++ +++|++++...+.-++|..
T Consensus 221 ~~~~~~aSLDHs~wFhrp~~~ddWlLy~~~sp~A~~~-rg---l~~G~lf-~r~G~LiA~~~QEG~~r~~ 285 (289)
T COG1946 221 TPGIQVASLDHSMWFHRPFRLDDWLLYAQESPSASGG-RG---LVRGQLF-DRDGQLIASVVQEGLIRYH 285 (289)
T ss_pred cCcceEeeccceEEEeccccCCCEEEEEeeCCcccCC-cc---eeeeEEE-cCCCCEEEEEeeeEEEecc
Confidence 3567778889999999999999988877666555422 23 2355654 7999999999999888854
No 119
>PLN02868 acyl-CoA thioesterase family protein
Probab=83.88 E-value=7.6 Score=37.14 Aligned_cols=78 Identities=15% Similarity=0.161 Sum_probs=57.0
Q ss_pred ceechHhHHHHHHHHHHHhhhcCCCccEEEEEEEECcCCCCCCEEEEEEEE--ECc-EEEEEEEEecCCceEEEEEEEEE
Q 021701 227 PILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWL--QGL-RVIYQVKVKERNRSALSGFVDVH 303 (309)
Q Consensus 227 ~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~pv~~gdtl~~~~~~--~~~-~v~~~~~~~~~g~~v~~g~a~v~ 303 (309)
.-++|-+.+|.+..+..+.. .+...+.++.+.|.+|-.++..+.+++++ +|. ....++...|+|+++++..+...
T Consensus 158 ~~~fGG~~~aqal~Aa~~~~--~~~~~~~s~~~~Fl~~~~~~~pv~~~V~~lr~Grs~~~r~v~~~Q~g~~~~~~~~sf~ 235 (413)
T PLN02868 158 GKVFGGQLVGQALAAASKTV--DPLKLVHSLHAYFLLVGDINLPIIYQVERIRDGHNFATRRVDAIQKGKVIFTLFASFQ 235 (413)
T ss_pred ccccchHHHHHHHHHHHccC--CCCCCceEeeeeecCCCCCCCCEEEEEEEEcCCCceEeeEEEEEECCeeEEEEeeccc
Confidence 44799999998887766553 23456789999999888887778777775 453 34445556789999888888776
Q ss_pred ecc
Q 021701 304 RLA 306 (309)
Q Consensus 304 ~p~ 306 (309)
.+.
T Consensus 236 ~~~ 238 (413)
T PLN02868 236 KEE 238 (413)
T ss_pred cCC
Confidence 553
No 120
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=83.13 E-value=7.3 Score=38.29 Aligned_cols=50 Identities=14% Similarity=0.029 Sum_probs=38.5
Q ss_pred cEEEEEEEECcCCCCCCEEEEEEEEEC---cEEEEEEEE-ecCCceEEEEEEEE
Q 021701 253 MVKNIFSRFLLHVYPGETLVTEMWLQG---LRVIYQVKV-KERNRSALSGFVDV 302 (309)
Q Consensus 253 ~~~~~~~rf~~pv~~gdtl~~~~~~~~---~~v~~~~~~-~~~g~~v~~g~a~v 302 (309)
.+.+.+++|.+|+..||+|+++.|+.. ..+.++..+ +++|+++.+|+.+.
T Consensus 397 vvv~~~i~y~rp~~~gD~v~I~t~v~~~~~~s~~~~~~i~~~~g~l~A~g~~~~ 450 (495)
T PRK07531 397 YTVETHIRHLGEAKAGQALHVETQLLSGDEKRLHLFHTLYDAGGELIATAEHML 450 (495)
T ss_pred EEEEEEEEEcccCCCCCEEEEEEEEEecCCcEEEEEEEEECCCCcEEEEEEEEE
Confidence 457899999999999999999999842 245555553 56788888887653
No 121
>PF14539 DUF4442: Domain of unknown function (DUF4442); PDB: 1YOC_B 1SH8_B.
Probab=82.50 E-value=5.1 Score=31.79 Aligned_cols=57 Identities=14% Similarity=0.270 Sum_probs=35.6
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEE
Q 021701 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 153 (309)
Q Consensus 93 ~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~ 153 (309)
.+=-+-+++|++| ..+.+++++++.+-. .+....++++.+++ |.+|+.|++.+.++.
T Consensus 75 ~~~k~~~i~f~kp--a~g~v~a~~~~~~e~-~~~~~~~~~~v~i~-D~~G~~Va~~~~t~~ 131 (132)
T PF14539_consen 75 VWDKSAEIDFLKP--ARGDVTATAELTEEQ-IGERGELTVPVEIT-DADGEVVAEATITWY 131 (132)
T ss_dssp EEEEEEEEEE-S-----S-EEEEEE-TCCH-CCHEEEEEEEEEEE-ETTC-EEEEEEEEEE
T ss_pred EEEEeeEEEEEec--cCCcEEEEEEcCHHH-hCCCcEEEEEEEEE-ECCCCEEEEEEEEEE
Confidence 3456889999998 556788888888722 23234466676764 789999999998874
No 122
>TIGR02447 yiiD_Cterm thioesterase domain, putative. This family consists of a broadly distributed uncharacterized domain found often as a standalone protein. The member from Shewanella oneidensis, PDB|1T82_A (Forouhar, et al., unpublished) is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an Acetyltransf_1 domain (PFAM model pfam00583). The function of this protein is unknown.
Probab=82.01 E-value=4.1 Score=32.62 Aligned_cols=58 Identities=14% Similarity=0.143 Sum_probs=40.3
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEE----------EEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021701 92 LLLHGQQYMELYKPFPSSASIRNEACIAG----------LHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 154 (309)
Q Consensus 92 ~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~----------v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 154 (309)
..+=.+.+++|++|...+ +.+++++.+ +..+|+. .+.++.+++ ++|+++++.+.++++
T Consensus 69 ~~vt~~~~i~yl~P~~~~--~~a~~~~~~~~~~~~~~~~l~~~gr~-~~~~~~~v~--~~~~lvA~~~g~~~~ 136 (138)
T TIGR02447 69 DIVIADSHIRYLAPVTGD--PVANCEAPDLESWEAFLATLQRGGKA-RVKLEAQIS--SDGKLAATFSGEYVA 136 (138)
T ss_pred cEEEEEeeeEEcCCcCCC--eEEEEEcCCHHHHHHHHHHHHhCCce-EEEEEEEEE--ECCEEEEEEEEEEEE
Confidence 467779999999999864 566666643 2334444 355666664 467999999999875
No 123
>cd01289 FabA_like Domain of unknown function, appears to be related to a diverse group of beta-hydroxydecanoyl ACP dehydratases (FabA) and beta-hydroxyacyl ACP dehydratases (FabZ). This group appears to lack the conserved active site histidine of FabA and FabZ.
Probab=81.52 E-value=19 Score=28.74 Aligned_cols=59 Identities=14% Similarity=0.067 Sum_probs=41.8
Q ss_pred ceeeeeeEEEEEeccCCC-CcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021701 91 RLLLHGQQYMELYKPFPS-SASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 154 (309)
Q Consensus 91 ~~~vH~~q~~~~~~Pl~~-gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 154 (309)
.+.+=+-.+++|++|..+ ||+|..++++..... +| +..++.+++ .+|+++++.+.+++.
T Consensus 77 ~g~l~~i~~~~f~~~v~p~Gd~l~i~~~~~~~~~--~~-~~~~~~~~~--v~~~~va~a~l~~~~ 136 (138)
T cd01289 77 PGFLLGSRKYEAHVDRFDLGSTLLIVVAELLQGD--SG-LGVFECTIE--DQGGVLASGRLNVYQ 136 (138)
T ss_pred cEEEEEEEEEEEEcceeCCCCeeEEEeeeeeeCC--Cc-EEEEEEEEE--ECCEEEEEEEEEEEc
Confidence 345666789999999755 999998887765542 23 334445543 468999999988765
No 124
>PRK05174 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; Validated
Probab=80.02 E-value=21 Score=29.82 Aligned_cols=56 Identities=11% Similarity=0.054 Sum_probs=40.7
Q ss_pred eeeeeEEEEEeccCCCCcE-EEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEE
Q 021701 93 LLHGQQYMELYKPFPSSAS-IRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMT 151 (309)
Q Consensus 93 ~vH~~q~~~~~~Pl~~gd~-l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t 151 (309)
.+-+-.+++|++++.+|++ ++.+.+|..+....++ +...+.+++ .+|+++++.+.-
T Consensus 105 ~l~g~~~~kfr~~v~Pgd~~l~l~v~i~~~~~~~~~-~~~~~~~i~--v~g~~va~a~~~ 161 (172)
T PRK05174 105 RALGVGEVKFTGQVLPTAKKVTYEIDIKRVINRKLV-MGIADGRVL--VDGEEIYTAKDL 161 (172)
T ss_pred EEeeccEEEECccCcCCCEEEEEEEEEEEEecCCCC-EEEEEEEEE--ECCEEEEEEEee
Confidence 4556778999999999998 8999999887553233 345565553 468898887543
No 125
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=78.39 E-value=16 Score=32.53 Aligned_cols=60 Identities=12% Similarity=0.207 Sum_probs=41.7
Q ss_pred ceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEe
Q 021701 91 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLR 155 (309)
Q Consensus 91 ~~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~r 155 (309)
....-..+.+.||+|++.++-+..+++....- .|+| .++.+++ +++|++|++..+.-++|
T Consensus 212 ~~~aSldhtv~fh~~~~~~~W~l~~~~s~~~~-~Grg---~~~~~l~-d~~G~lvAs~~Qe~l~r 271 (271)
T TIGR00189 212 SMAASLDHSIWFHRPFRADDWLLYKCSSPSAS-GSRG---LVEGKIF-TRDGVLIASTVQEGLVR 271 (271)
T ss_pred cEEEeeeeeEEEeCCCCCCeeEEEEEEecccc-CCce---EEEEEEE-CCCCCEEEEEEeeeecC
Confidence 34457789999999988888776655544331 1233 3345654 79999999999987765
No 126
>PF02551 Acyl_CoA_thio: Acyl-CoA thioesterase; InterPro: IPR003703 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH). They consequently have the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. They may also be involved in the metabolic regulation of peroxisome proliferation. Thioesters play a central role in cells as they participate in metabolism, membrane synthesis, signal transduction, and gene regulation. Thioesterases catalyse the hydrolysis of thioesters to the thiol and carboxylic acid components. Many thioesterases have a hot dog fold, including YciA from Escherichia coli and its close sequence homologue HI0827 from Haemophilus influenzae (HiYciA) []. In Helicobacter pylori, YbgC also belongs to the hot-dog family of proteins, with a epsilongamma tetrameric arrangement []. YbgC proteins are bacterial acyl-CoA thioesterases associated with the Tol-Pal system. This system is important for cell envelope integrity and is part of the cell division machinery. However, the E. coli thioesterase II reveals a new tertiary fold: a 'double hot dog'. It has an internal repeat with a basic unit that is structurally similar to the recently described beta-hydroxydecanoyl thiol ester dehydrase []. ; GO: 0016291 acyl-CoA thioesterase activity, 0006637 acyl-CoA metabolic process; PDB: 1C8U_B 1TBU_B 3U0A_B.
Probab=77.77 E-value=28 Score=27.69 Aligned_cols=58 Identities=12% Similarity=0.170 Sum_probs=35.1
Q ss_pred CCCceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcC-CeEEEEEEEEEEECCCCcEEEEEEEE
Q 021701 88 HDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKG-KAAILEIETKSYNAESGELLCMNRMT 151 (309)
Q Consensus 88 ~~~~~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~-~G~~v~~~~~~~~~~~Ge~v~~~~~t 151 (309)
.+-..+ =..+.+-||||.+.+|-|....+ +..-.+ +|. ++.+++.+++|++|++..+.
T Consensus 71 ~~~~~v-SlDHs~wFHrpfr~ddWlLY~~~--sp~A~~~Rgl---~~G~~f~~q~G~Lvas~~QE 129 (131)
T PF02551_consen 71 FPKFQV-SLDHSMWFHRPFRADDWLLYAIE--SPSASGGRGL---VRGRFFDTQDGELVASVVQE 129 (131)
T ss_dssp CCCEEE-EEEEEEEE-S--BTTS-EEEEEE--EEEEETTEEE---EEECCEEECTTEEEEEEEEE
T ss_pred ccccEE-ecceeEEEcCCCCCCCCEEEEEE--cCccccCccc---ccCceEecCCCCEEEEEecC
Confidence 334444 77899999999999997765433 333333 442 24454436899999997764
No 127
>COG0764 FabA 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism]
Probab=77.61 E-value=28 Score=28.28 Aligned_cols=87 Identities=10% Similarity=0.056 Sum_probs=53.3
Q ss_pred cccCCeeeeecccCcCCCCC--CCCCCCCCC---CceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEE
Q 021701 61 IQVLPTFSALFSFELEPSGA--IDLPGLQHD---PRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETK 135 (309)
Q Consensus 61 ~~apPtf~~~l~~~~~~~~~--~~~~~~~~~---~~~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~ 135 (309)
|.--|.++.++...+ ++. ...-....+ -.....+=+...|.+|+.|||.+..+.++...+...-+ ....+
T Consensus 52 FP~~PimPGVLilea--maQ~~g~~~~~~~~~~~~~~~~~gid~~kF~~~V~PGd~l~l~~~~~~~~~~~~~---~~~~~ 126 (147)
T COG0764 52 FPGDPIMPGVLILEA--MAQAAGFLLGWLLGNKGKLGYFLGIDNAKFKRPVLPGDQLELEVKLLKSRRLGIG---KAKGV 126 (147)
T ss_pred CCCCCCcchhHHHHH--HHHHHHHHHhccccCCccEEEEEEecceeecCccCCCCEEEEEEEEEEecccceE---EEEEE
Confidence 667778887776553 221 000011111 25567888999999999999998877777655433222 22333
Q ss_pred EEECCCCcEEEEEEEEEEE
Q 021701 136 SYNAESGELLCMNRMTAFL 154 (309)
Q Consensus 136 ~~~~~~Ge~v~~~~~t~~~ 154 (309)
. ..+|+++++.....+.
T Consensus 127 a--~Vdg~~v~~a~~~~~~ 143 (147)
T COG0764 127 A--TVDGKVVAEAELLFAG 143 (147)
T ss_pred E--EECCEEEEEEEEEEEE
Confidence 2 2479998888776654
No 128
>PLN02647 acyl-CoA thioesterase
Probab=77.14 E-value=18 Score=34.94 Aligned_cols=61 Identities=13% Similarity=0.154 Sum_probs=41.5
Q ss_pred eEEEEEeccCCCCcEEEEEEEEEEEEEcCCe---EEEEEEEEEEEC--CCCcEEEEEEEEEEEecc
Q 021701 97 QQYMELYKPFPSSASIRNEACIAGLHDKGKA---AILEIETKSYNA--ESGELLCMNRMTAFLRGA 157 (309)
Q Consensus 97 ~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G---~~v~~~~~~~~~--~~Ge~v~~~~~t~~~rg~ 157 (309)
=.++.|++|++.|+.|..+++|.-......| ..+.+...+... ..++++.+...|++....
T Consensus 338 vd~v~F~~PV~vGdil~l~A~V~yt~~~s~g~~~i~veV~v~v~~~~~~~~~~~n~~~fTfva~d~ 403 (437)
T PLN02647 338 VDHVDFLRPVDVGDFLRFKSCVLYTELENSEQPLINVEVVAHVTRPELRSSEVSNTFYFTFTVRPE 403 (437)
T ss_pred ecceEecCccccCcEEEEEEEEEEEeEEecCceEEEEEEEEEEEcCCCCcceEEEEEEEEEEEecc
Confidence 3578999999999999999999988765432 223333333221 245667777888877654
No 129
>TIGR01749 fabA beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA. This enzyme, FabA, shows overlapping substrate specificity with FabZ with regard to chain length in fatty acid biosynthesis. It is commonly designated 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) as if it were specific for that chain length, but its specificity is broader; it is active even in the initiation of fatty acid biosynthesis. This enzyme can also isomerize trans-2-decenoyl-ACP to cis-3-decenoyl-ACP to bypass reduction by FabI and instead allow biosynthesis of unsaturated fatty acids. FabA cannot elongate unsaturated fatty acids.
Probab=75.50 E-value=19 Score=30.03 Aligned_cols=54 Identities=7% Similarity=0.015 Sum_probs=38.9
Q ss_pred eeeeEEEEEeccCCCCcEE-EEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEE
Q 021701 94 LHGQQYMELYKPFPSSASI-RNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRM 150 (309)
Q Consensus 94 vH~~q~~~~~~Pl~~gd~l-~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~ 150 (309)
+=+-.+++|++|+.+||++ +.+.++..+....++ +...+.+++ .+|+++++.+.
T Consensus 103 l~gi~~~kfr~~v~Pgd~~~~l~v~i~~~~~~~~~-~~~~~~~i~--v~g~~va~a~~ 157 (169)
T TIGR01749 103 ALGVGEVKFTGQVLPTAKKVTYRIHFKRVINRRLV-MGIADGEVL--VDGRLIYTASD 157 (169)
T ss_pred EeeccEEEEccCEecCCeEEEEEEEEEEEeecCCc-EEEEEEEEE--ECCEEEEEEEC
Confidence 4445699999999999997 888888887654434 345555553 47888888654
No 130
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=73.82 E-value=20 Score=32.49 Aligned_cols=59 Identities=14% Similarity=0.138 Sum_probs=41.6
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEec
Q 021701 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRG 156 (309)
Q Consensus 93 ~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg 156 (309)
..=..+.+.||+|.+++|-+..+.+.... +.|. -..+.+++ +++|++|++..+.-++|.
T Consensus 226 ~aSLdhsi~Fh~~~~~d~W~L~~~~s~~a---~~gr-~~~~g~i~-~~~G~LvAs~~Qegl~r~ 284 (286)
T PRK10526 226 IATIDHSMWFHRPFNLNEWLLYSVESTSA---SSAR-GFVRGEFY-TQDGVLVASTVQEGVMRN 284 (286)
T ss_pred EEeeeEeEEEeCCCCCCceEEEEEECCcc---cCCc-eEEEEEEE-CCCCCEEEEEEeeEEEEe
Confidence 34668999999999988877765544332 2232 12344554 799999999999988874
No 131
>cd03444 Thioesterase_II_repeat1 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=70.91 E-value=33 Score=25.84 Aligned_cols=58 Identities=14% Similarity=0.155 Sum_probs=36.4
Q ss_pred ceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEE
Q 021701 91 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 153 (309)
Q Consensus 91 ~~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~ 153 (309)
....=..+.+.||+|....+-+..+.+.... +.|. ...+.+++ +++|++|++..+.-+
T Consensus 46 ~~~aSldhsi~Fh~~~~~~~W~l~~~~~~~~---~~gr-~~~~~~l~-~~~G~LvAs~~Q~~l 103 (104)
T cd03444 46 SASASLDHAIWFHRPFRADDWLLYEQRSPRA---GNGR-GLVEGRIF-TRDGELVASVAQEGL 103 (104)
T ss_pred cceEeeeEEEEEeCCCCCCceEEEEEECccc---cCCe-eEEEEEEE-CCCCCEEEEEEEeee
Confidence 3445668999999998875444433332211 1232 34455654 789999999988754
No 132
>KOG3328 consensus HGG motif-containing thioesterase [General function prediction only]
Probab=67.44 E-value=62 Score=26.30 Aligned_cols=61 Identities=16% Similarity=0.248 Sum_probs=46.0
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCe-EEEEEEEEEEECCCCcEEEEEEEEEEEecc
Q 021701 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKA-AILEIETKSYNAESGELLCMNRMTAFLRGA 157 (309)
Q Consensus 92 ~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G-~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg~ 157 (309)
+.+-.+-.+.|..|-+.|+.|..++++..+ |+. .+..+ +.+...+|+..+..+.+.+.+..
T Consensus 81 ~gvsvdLsvsyL~~AklGe~l~i~a~~vr~---Gk~la~t~v--~l~~K~t~kiia~grhtk~~~~~ 142 (148)
T KOG3328|consen 81 PGVSVDLSVSYLSSAKLGEELEIEATVVRV---GKTLAFTDV--ELRRKSTGKIIAKGRHTKYFRPA 142 (148)
T ss_pred CceEEEEEhhhccccCCCCeEEEEEEEeec---CceEEEEEE--EEEEcCCCeEEEecceEEEeecC
Confidence 446677889999999999999999988754 343 33333 34445689999999999888755
No 133
>PF03756 AfsA: A-factor biosynthesis hotdog domain; InterPro: IPR005509 The AfsA family are key enzymes in A-factor biosynthesis, which is essential for streptomycin production and resistance. This domain is distantly related to the thioester dehydratase FabZ family and therefore has a Hotdog domain [].
Probab=60.16 E-value=62 Score=25.28 Aligned_cols=51 Identities=10% Similarity=0.074 Sum_probs=37.1
Q ss_pred ccEEEEEEEECcCCCCCCEEEEEEEEE------C--cEEEEEEEEecCCceEEEEEEEE
Q 021701 252 NMVKNIFSRFLLHVYPGETLVTEMWLQ------G--LRVIYQVKVKERNRSALSGFVDV 302 (309)
Q Consensus 252 ~~~~~~~~rf~~pv~~gdtl~~~~~~~------~--~~v~~~~~~~~~g~~v~~g~a~v 302 (309)
-.+.+++++|.+++...-.+.+++... + ....+++.+.|+|+.+.+++++.
T Consensus 72 ~~~~~l~~~f~~~~e~~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~q~g~~~a~~~~~~ 130 (132)
T PF03756_consen 72 FVLTSLDFTFSRFAELDVPADLTVRITCRDRRGGRPRGLRFRVTVSQGGRVVATASMTF 130 (132)
T ss_pred EEEEEEEEEEccccccCCCEEEEEEEEeccccCCccceEEEEEEEEECCEEEEEEEEEE
Confidence 356789999999997666777766542 1 13556666789999999988765
No 134
>PF12119 DUF3581: Protein of unknown function (DUF3581); InterPro: IPR021974 This family consists of uncharacterised bacterial proteins.
Probab=56.71 E-value=14 Score=31.65 Aligned_cols=46 Identities=11% Similarity=0.114 Sum_probs=32.8
Q ss_pred eeEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCccccccCCe--eeeecccCc
Q 021701 20 KTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPT--FSALFSFEL 75 (309)
Q Consensus 20 ~~~~~~~~~i~~yA~avG~~~~~P~~~~~~~~~~~~~g~~~~~apPt--f~~~l~~~~ 75 (309)
..+.+++++...||.-|-. |.||+|..|. ..|.+|-. |+++|..-+
T Consensus 12 ~~v~is~~QAS~FAK~VAg-DFNPIHD~Da---------KRFCVPGDLLFalvL~~~G 59 (218)
T PF12119_consen 12 GSVSISAEQASRFAKEVAG-DFNPIHDPDA---------KRFCVPGDLLFALVLAKYG 59 (218)
T ss_pred CEEEEcHHHHhHHHHHhcc-CCCccCCCCC---------ccccCccHHHHHHHHHhcC
Confidence 3589999999999999986 8999965332 23666664 555555544
No 135
>PLN02370 acyl-ACP thioesterase
Probab=56.62 E-value=87 Score=30.15 Aligned_cols=50 Identities=8% Similarity=0.022 Sum_probs=36.7
Q ss_pred cEEEEEEEECcCCCCCCEEEEEEEEEC--c-EE--EEEEEEecCCceEEEEEEEE
Q 021701 253 MVKNIFSRFLLHVYPGETLVTEMWLQG--L-RV--IYQVKVKERNRSALSGFVDV 302 (309)
Q Consensus 253 ~~~~~~~rf~~pv~~gdtl~~~~~~~~--~-~v--~~~~~~~~~g~~v~~g~a~v 302 (309)
.+.++.+++.+|..-||+|+++.|..+ + .. .|++...++|+.+..+....
T Consensus 198 VLtr~~I~~~R~P~~gD~V~V~Twv~~~~k~~~~Rdf~I~D~~~Ge~la~A~SvW 252 (419)
T PLN02370 198 VVTRMQVLVDRYPTWGDVVQVDTWVSASGKNGMRRDWLVRDCKTGETLTRASSVW 252 (419)
T ss_pred EEEEEEEEeCcCCCCCCEEEEEEEEeeCCCCEEEEEEEEEECCCCeEEEEEEEEE
Confidence 457899999999999999999999853 2 22 23332234689988887653
No 136
>PF09500 YiiD_Cterm: Putative thioesterase (yiiD_Cterm); InterPro: IPR012660 This entry consists of a broadly distributed uncharacterised domain found often as a standalone protein. The member from is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an N-terminal acetyltransferase domain (IPR000182 from INTERPRO). The function of these proteins are unknown. ; PDB: 1T82_C.
Probab=55.66 E-value=89 Score=25.29 Aligned_cols=60 Identities=13% Similarity=0.188 Sum_probs=35.0
Q ss_pred ceeeeeeEEEEEeccCCCCcEEEEEEEEEE---EE---Ec--CCe-EEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021701 91 RLLLHGQQYMELYKPFPSSASIRNEACIAG---LH---DK--GKA-AILEIETKSYNAESGELLCMNRMTAFL 154 (309)
Q Consensus 91 ~~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~---v~---~k--~~G-~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 154 (309)
..+|=.+.+++|++|+.-. +++++++.+ +. ++ .+| .-+.++.+++ .+|+.+++-+..++.
T Consensus 74 ~~IVi~~~~i~Y~~Pv~~d--~~A~~~~~~~~~~~~~~~~l~~~grari~l~~~i~--~~~~~~a~f~G~yv~ 142 (144)
T PF09500_consen 74 GDIVIADSNIRYLKPVTGD--FTARCSLPEPEDWERFLQTLARGGRARITLEVEIY--SGGELAAEFTGRYVA 142 (144)
T ss_dssp -EEEEEEEEEEE-S---S----EEEEE-------S---GGGGCTS-EEEEEEEEEE--ETTEEEEEEEEEEEE
T ss_pred CcEEEEeCceEEcCCCCCC--cEEEEeccccchhHHHHHHHHcCCcEEEEEEEEEE--ECCEEEEEEEEEEEE
Confidence 5689999999999999766 555555552 21 11 122 4577787875 478889998888875
No 137
>PF10989 DUF2808: Protein of unknown function (DUF2808); InterPro: IPR021256 This family of proteins with unknown function appears to be restricted to Cyanobacteria.
Probab=53.18 E-value=70 Score=25.76 Aligned_cols=40 Identities=20% Similarity=0.177 Sum_probs=30.6
Q ss_pred EEEEEEECcCCCCCCEEEEEEEE-----ECcEEEEEEEEecCCce
Q 021701 255 KNIFSRFLLHVYPGETLVTEMWL-----QGLRVIYQVKVKERNRS 294 (309)
Q Consensus 255 ~~~~~rf~~pv~~gdtl~~~~~~-----~~~~v~~~~~~~~~g~~ 294 (309)
..+++.|..||-||+++++.+.. .+|...|.+...-.|+.
T Consensus 89 ~~i~I~f~~PV~pG~tv~V~l~~v~NP~~~G~Y~f~v~a~p~G~~ 133 (146)
T PF10989_consen 89 RTITITFDEPVPPGTTVTVVLSPVRNPRSGGTYQFNVTAFPPGDN 133 (146)
T ss_pred CEEEEEeCCCCCCCCEEEEEEEeeeCCCCCCeEEEEEEEECCCCC
Confidence 46899999999999999999854 24777888775444543
No 138
>PF01835 A2M_N: MG2 domain; InterPro: IPR002890 The proteinase-binding alpha-macroglobulins (A2M) [] are large glycoproteins found in the plasma of vertebrates, in the hemolymph of some invertebrates and in reptilian and avian egg white. A2M-like proteins are able to inhibit all four classes of proteinases by a 'trapping' mechanism. They have a peptide stretch, called the 'bait region', which contains specific cleavage sites for different proteinases. When a proteinase cleaves the bait region, a conformational change is induced in the protein, thus trapping the proteinase. The entrapped enzyme remains active against low molecular weight substrates, whilst its activity toward larger substrates is greatly reduced, due to steric hindrance. Following cleavage in the bait region, a thiol ester bond, formed between the side chains of a cysteine and a glutamine, is cleaved and mediates the covalent binding of the A2M-like protein to the proteinase. This family includes the N-terminal region of the alpha-2-macroglobulin family. The inhibitor domains belong to MEROPS inhibitor family I39.; GO: 0004866 endopeptidase inhibitor activity; PDB: 2B39_B 3KLS_B 3PRX_C 3KM9_B 3PVM_C 3CU7_A 4E0S_A 4A5W_A 4ACQ_C 2P9R_B ....
Probab=48.21 E-value=55 Score=24.00 Aligned_cols=41 Identities=17% Similarity=0.136 Sum_probs=24.6
Q ss_pred EEECcCCC-CCCEEEEEEEE--EC--------cEEEEEEEEecCCceEEEEEE
Q 021701 259 SRFLLHVY-PGETLVTEMWL--QG--------LRVIYQVKVKERNRSALSGFV 300 (309)
Q Consensus 259 ~rf~~pv~-~gdtl~~~~~~--~~--------~~v~~~~~~~~~g~~v~~g~a 300 (309)
+.--+|+| |||+|.+++.. .. ..+.+.+ .+.+|..+.....
T Consensus 4 i~TDr~iYrPGetV~~~~~~~~~~~~~~~~~~~~~~v~i-~dp~g~~v~~~~~ 55 (99)
T PF01835_consen 4 IQTDRPIYRPGETVHFRAIVRDLDNDFKPPANSPVTVTI-KDPSGNEVFRWSV 55 (99)
T ss_dssp EEESSSEE-TTSEEEEEEEEEEECTTCSCESSEEEEEEE-EETTSEEEEEEEE
T ss_pred EECCccCcCCCCEEEEEEEEeccccccccccCCceEEEE-ECCCCCEEEEEEe
Confidence 34567888 99999998874 22 1333333 2556766655444
No 139
>PF14765 PS-DH: Polyketide synthase dehydratase; PDB: 3KG7_D 3KG9_A 3KG8_B 3HRR_A 3HRQ_A 3EL6_A 3KG6_B 2VZ8_A 2VZ9_A.
Probab=47.66 E-value=1.2e+02 Score=26.78 Aligned_cols=60 Identities=15% Similarity=0.241 Sum_probs=40.8
Q ss_pred ceeeeeeEEEEEec-cCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEe
Q 021701 91 RLLLHGQQYMELYK-PFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLR 155 (309)
Q Consensus 91 ~~~vH~~q~~~~~~-Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~r 155 (309)
..+-.+=.++.+++ |.+.++++.+.+++ .+.++..+..+..++ |++|+++++...-.+.+
T Consensus 228 ~~lP~~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~dv~v~-d~~G~~~~~~~gl~~~~ 288 (295)
T PF14765_consen 228 VFLPVSIERIRIFRAPPPPGDRLYVYARL----VKSDDDTITGDVTVF-DEDGRVVAELEGLTFRR 288 (295)
T ss_dssp EEEEEEEEEEEESSS--SSTSEEEEEEEE----ESTTTTEEEEEEEEE-ETTSBEEEEEEEEEEEE
T ss_pred EEcccEeCEEEEEeccCCCCCEEEEEEEE----ecccceEEEEEEEEE-CCCCCEEEEEccEEEEE
Confidence 34455558899994 88999999999999 333333455666655 68999999887755543
No 140
>PF03756 AfsA: A-factor biosynthesis hotdog domain; InterPro: IPR005509 The AfsA family are key enzymes in A-factor biosynthesis, which is essential for streptomycin production and resistance. This domain is distantly related to the thioester dehydratase FabZ family and therefore has a Hotdog domain [].
Probab=42.04 E-value=1.6e+02 Score=22.82 Aligned_cols=59 Identities=10% Similarity=0.090 Sum_probs=39.6
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcC-CeEEEEEEEEEEECCCCcEEEEEEEEE
Q 021701 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKG-KAAILEIETKSYNAESGELLCMNRMTA 152 (309)
Q Consensus 92 ~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~-~G~~v~~~~~~~~~~~Ge~v~~~~~t~ 152 (309)
+.+-.+-+++|.+++...-.+.++..+..-..++ ...-..++.++ .|+|+++++...++
T Consensus 71 ~~~~~~l~~~f~~~~e~~~P~~~~~~~~~~~~~~~~~~~~~~~v~~--~q~g~~~a~~~~~~ 130 (132)
T PF03756_consen 71 QFVLTSLDFTFSRFAELDVPADLTVRITCRDRRGGRPRGLRFRVTV--SQGGRVVATASMTF 130 (132)
T ss_pred eEEEEEEEEEEccccccCCCEEEEEEEEeccccCCccceEEEEEEE--EECCEEEEEEEEEE
Confidence 4566688999999886666777777666554442 22334445454 47999999988764
No 141
>PF14539 DUF4442: Domain of unknown function (DUF4442); PDB: 1YOC_B 1SH8_B.
Probab=40.81 E-value=1.8e+02 Score=22.83 Aligned_cols=48 Identities=13% Similarity=0.066 Sum_probs=28.3
Q ss_pred cEEEEEEEECcCCCCCCEEEEEEEEE----C--cEEEEEEEE-ecCCceEEEEEEEE
Q 021701 253 MVKNIFSRFLLHVYPGETLVTEMWLQ----G--LRVIYQVKV-KERNRSALSGFVDV 302 (309)
Q Consensus 253 ~~~~~~~rf~~pv~~gdtl~~~~~~~----~--~~v~~~~~~-~~~g~~v~~g~a~v 302 (309)
..++.+++|.+| .-..|+++...+ + ....+.+.+ +.+|+.|.+++.++
T Consensus 76 ~~k~~~i~f~kp--a~g~v~a~~~~~~e~~~~~~~~~~~v~i~D~~G~~Va~~~~t~ 130 (132)
T PF14539_consen 76 WDKSAEIDFLKP--ARGDVTATAELTEEQIGERGELTVPVEITDADGEVVAEATITW 130 (132)
T ss_dssp EEEEEEEEE-S-----S-EEEEEE-TCCHCCHEEEEEEEEEEEETTC-EEEEEEEEE
T ss_pred EEEeeEEEEEec--cCCcEEEEEEcCHHHhCCCcEEEEEEEEEECCCCEEEEEEEEE
Confidence 357899999999 455566666542 1 244555554 78899999888776
No 142
>PF01643 Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR002864 This entry represents various acyl-acyl carrier protein (ACP) thioesterases (TE) which terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid []. These proteins contain a duplication of two 4HBT-like domains.; GO: 0016790 thiolester hydrolase activity, 0006633 fatty acid biosynthetic process; PDB: 2ESS_A 2OWN_A.
Probab=39.23 E-value=2.2e+02 Score=25.20 Aligned_cols=51 Identities=12% Similarity=0.009 Sum_probs=32.9
Q ss_pred cEEEEEEEECcCCCCCCEEEEEEEEEC--cE---EEEEEEEecCCceEEEEEEEEE
Q 021701 253 MVKNIFSRFLLHVYPGETLVTEMWLQG--LR---VIYQVKVKERNRSALSGFVDVH 303 (309)
Q Consensus 253 ~~~~~~~rf~~pv~~gdtl~~~~~~~~--~~---v~~~~~~~~~g~~v~~g~a~v~ 303 (309)
.+.++.+++.++-.-||+|+++.|..+ +. -.|++...++|+.++.+.....
T Consensus 62 vl~r~~i~i~r~P~~~e~i~i~Tw~~~~~~~~~~R~f~i~d~~~G~~l~~a~s~Wv 117 (261)
T PF01643_consen 62 VLSRYQIEIHRYPRWGEKITIETWPSGFKRFFAYRDFEIYDAEDGELLARATSIWV 117 (261)
T ss_dssp EEEEEEEEESS--BTT-EEEEEEEEEEE-SSEEEEEEEEE--TTS-EEEEEEEEEE
T ss_pred EEEEEEEEEEecCCCCCEEEEEEEeccCCCcEEEEEEEEEECCCCcEEEEEEEEEE
Confidence 456799999999999999999999854 21 2233332268999988876543
No 143
>PLN02868 acyl-CoA thioesterase family protein
Probab=39.02 E-value=94 Score=29.64 Aligned_cols=56 Identities=14% Similarity=0.082 Sum_probs=37.7
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEE
Q 021701 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 153 (309)
Q Consensus 93 ~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~ 153 (309)
..=..+.+.||+|+..+|-+..+.+.... +.|. -..+.+++ +++|++|++..+.-+
T Consensus 357 ~aSLdhsi~Fh~~~~~d~W~l~~~~s~~a---~~gr-~~~~g~l~-~~~G~LvAs~~Qe~l 412 (413)
T PLN02868 357 ALSLDHSMWFHRPFRADDWLLFVIVSPAA---HNGR-GFATGHMF-NRKGELVVSLTQEAL 412 (413)
T ss_pred EEEcceeEEEecCCCCCceEEEEEECCcc---CCCc-ceEEEEEE-CCCCCEEEEEEeeec
Confidence 45566899999999888876655544333 2232 23345654 799999999987643
No 144
>PF09500 YiiD_Cterm: Putative thioesterase (yiiD_Cterm); InterPro: IPR012660 This entry consists of a broadly distributed uncharacterised domain found often as a standalone protein. The member from is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an N-terminal acetyltransferase domain (IPR000182 from INTERPRO). The function of these proteins are unknown. ; PDB: 1T82_C.
Probab=38.07 E-value=2.2e+02 Score=23.06 Aligned_cols=77 Identities=14% Similarity=0.035 Sum_probs=34.2
Q ss_pred CCCCceechHhHHHHHHHHHH-HhhhcCCCccEEEEEEEECcCCCCCCEEEEEEEE------------ECc--EEEEEEE
Q 021701 223 GFSRPILHGLCTMGFAVRAII-KFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWL------------QGL--RVIYQVK 287 (309)
Q Consensus 223 G~~~~i~hG~~~~~~~~~~~~-~~~~~g~~~~~~~~~~rf~~pv~~gdtl~~~~~~------------~~~--~v~~~~~ 287 (309)
.|.+-|.--+-..||.+-.+. +.......-.+.+-++||.+||.-.=+.++..-. .++ .+.+++.
T Consensus 46 ~FgGSl~slatLaGW~lv~l~l~e~~~~~~IVi~~~~i~Y~~Pv~~d~~A~~~~~~~~~~~~~~~~l~~~grari~l~~~ 125 (144)
T PF09500_consen 46 MFGGSLYSLATLAGWGLVWLQLKEAGLNGDIVIADSNIRYLKPVTGDFTARCSLPEPEDWERFLQTLARGGRARITLEVE 125 (144)
T ss_dssp B-HHHHHHHHHHHHHHHHHHHHHHHT---EEEEEEEEEEE-S---S--EEEEE-------S---GGGGCTS-EEEEEEEE
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeCceEEcCCCCCCcEEEEeccccchhHHHHHHHHcCCcEEEEEEEE
Confidence 355555544444554442222 1111112335667889999999876555555431 134 4555555
Q ss_pred EecCCceEEEEE
Q 021701 288 VKERNRSALSGF 299 (309)
Q Consensus 288 ~~~~g~~v~~g~ 299 (309)
+-.+|+.+.+.+
T Consensus 126 i~~~~~~~a~f~ 137 (144)
T PF09500_consen 126 IYSGGELAAEFT 137 (144)
T ss_dssp EEETTEEEEEEE
T ss_pred EEECCEEEEEEE
Confidence 666777776533
No 145
>COG1946 TesB Acyl-CoA thioesterase [Lipid metabolism]
Probab=34.27 E-value=2.2e+02 Score=25.90 Aligned_cols=79 Identities=14% Similarity=0.153 Sum_probs=53.2
Q ss_pred CceechHhHHHHHHHHHHHhhhcCCCccEEEEEEEECcCCCCCCEEEEEEEE--ECcE-EEEEEEEecCCceEEEEEEEE
Q 021701 226 RPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWL--QGLR-VIYQVKVKERNRSALSGFVDV 302 (309)
Q Consensus 226 ~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~pv~~gdtl~~~~~~--~~~~-v~~~~~~~~~g~~v~~g~a~v 302 (309)
..-+.|-...|-+..+..+.. .+...+.++-.-|.+|.-+-+.+...+++ +|+. ..-++..-|+|+++.+..|..
T Consensus 31 ~~~vFGGqvvaQAL~Aa~~TV--~~~r~vhSlh~yFl~pgd~~~pi~y~Ve~lRdG~sfs~rrV~aiQ~g~~If~~~ASF 108 (289)
T COG1946 31 LRRVFGGQVVAQALVAALRTV--PEDRVVHSLHSYFLRPGDPEQPIIYDVERLRDGRSFSTRRVDAIQHGKLIFSATASF 108 (289)
T ss_pred CccccccchHHHHHHHHHhhc--CCCCCcceehhhhcCCCCcCCceEEEEEeccCCCceEeEEEEEEECCEEEEEEEeec
Confidence 344555666665555555543 22445667778999999999999888886 4543 333455579999998888877
Q ss_pred Eecc
Q 021701 303 HRLA 306 (309)
Q Consensus 303 ~~p~ 306 (309)
..+.
T Consensus 109 ~~~e 112 (289)
T COG1946 109 QVPE 112 (289)
T ss_pred cCCC
Confidence 6554
No 146
>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B.
Probab=34.16 E-value=2.1e+02 Score=24.87 Aligned_cols=54 Identities=7% Similarity=0.180 Sum_probs=33.4
Q ss_pred eEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEecc
Q 021701 97 QQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGA 157 (309)
Q Consensus 97 ~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg~ 157 (309)
.-.+.|.+|.++| .++.++++.. .|+. +-.++.++ .|+|.++++...++..+..
T Consensus 38 s~~~~fl~p~~~~-~~~~~v~~~r---~Gr~-~~~~~v~~--~q~~~~~~~a~~~f~~~~~ 91 (255)
T PF13622_consen 38 SLHVYFLRPVPPG-PVEYRVEVLR---DGRS-FSTRQVEL--SQDGKVVATATASFGRPEP 91 (255)
T ss_dssp EEEEEESS--BSC-EEEEEEEEEE---ESSS-EEEEEEEE--EETTEEEEEEEEEEE--TT
T ss_pred EEEeEeccccccC-CEEEEEEEee---CCCc-EEEEEEEE--EECCcCEEEEEEEEccCcC
Confidence 4678899999999 8887776653 2332 23334443 3788899998888766543
No 147
>COG0335 RplS Ribosomal protein L19 [Translation, ribosomal structure and biogenesis]
Probab=28.04 E-value=1.1e+02 Score=23.60 Aligned_cols=18 Identities=22% Similarity=0.603 Sum_probs=13.7
Q ss_pred cCCC-CCCEEEEEEEE-ECc
Q 021701 263 LHVY-PGETLVTEMWL-QGL 280 (309)
Q Consensus 263 ~pv~-~gdtl~~~~~~-~~~ 280 (309)
-|-| ||||+.+.+++ +|+
T Consensus 18 iP~f~~GDtvrv~vki~Eg~ 37 (115)
T COG0335 18 IPSFRPGDTVRVHVKIVEGS 37 (115)
T ss_pred CCCCCCCCEEEEEEEEEeCC
Confidence 4666 99999999886 444
No 148
>PF10862 FcoT: FcoT-like thioesterase domain; InterPro: IPR022598 Proteins in this family have a HotDog fold. This family was formerly known as DUF2662. The structure of Rv0098 from M. tuberculosis [] suggested a thioesterase function. Assays showed that this protein was a thioesterase with a preference for long chain fatty acyl groups []. The maximal Kcat was observed for palmitoyl-CoA, although longer and shorter molecules were also cleaved. In solution this protein forms a homo-hexameric complex.; PDB: 2PFC_A 3B18_A.
Probab=26.98 E-value=3.6e+02 Score=22.16 Aligned_cols=52 Identities=12% Similarity=0.156 Sum_probs=30.7
Q ss_pred CceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCe---EEEEEEEEEEECCCCc
Q 021701 90 PRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKA---AILEIETKSYNAESGE 143 (309)
Q Consensus 90 ~~~~vH~~q~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G---~~v~~~~~~~~~~~Ge 143 (309)
|..++-..-+-+|.|||.+-. .+.+..+.++..+.+. .++.+..+. .|++|-
T Consensus 93 LsdilI~~~~S~Frr~i~~~~-F~g~~~~~~~~~~~~~~~~l~l~t~~~F-~D~~GG 147 (157)
T PF10862_consen 93 LSDILITSFKSRFRRPINPRH-FSGELEVTDMRVRDRTWPYLFLSTECRF-WDDDGG 147 (157)
T ss_dssp HHHEEEEEE-EEE-S---TTS-EEEEEEEE--EEE-SSS-EEEEEEEEEE-E-----
T ss_pred cCceeEeechhhhhcccCcce-EEEEEEEEEEEEeccCCceEEEeeEEEE-EeCCCC
Confidence 567888999999999998765 8888889999888776 667777774 455543
Done!