BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>021705
MYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHP
PRLVSRIANGIASGLDAFFLNRFESHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVI
YNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGAVYSQRIQRLERE
KMGLEGTHDDMADPMYNLSKAAVSPTRSFRGTSLVPSDHFVLPSSLEYYDGRDVGSLQDE
HKERLIHLPNPPSINTHGVLGQILFDVCVPKNVEGWDIRSSDSLNGSWYNSSQRRAPFNP
IKCMRRSRL

High Scoring Gene Products

Symbol, full name Information P value
AT5G44250 protein from Arabidopsis thaliana 3.1e-90
AT2G15695 protein from Arabidopsis thaliana 2.2e-80

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  021705
        (309 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2167613 - symbol:AT5G44250 "AT5G44250" species...   900  3.1e-90   1
TAIR|locus:505006247 - symbol:AT2G15695 "AT2G15695" speci...   807  2.2e-80   1


>TAIR|locus:2167613 [details] [associations]
            symbol:AT5G44250 "AT5G44250" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005777 "peroxisome" evidence=IDA] EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0005777 EMBL:AB005239
            InterPro:IPR008547 PANTHER:PTHR12265 Pfam:PF05705
            HOGENOM:HOG000239704 EMBL:AY054511 EMBL:AY086741 EMBL:BT008858
            IPI:IPI00521686 RefSeq:NP_199238.1 UniGene:At.20604
            ProteinModelPortal:Q9FFG7 SMR:Q9FFG7 PRIDE:Q9FFG7
            EnsemblPlants:AT5G44250.1 GeneID:834448 KEGG:ath:AT5G44250
            TAIR:At5g44250 InParanoid:Q9FFG7 OMA:NVEDWDI PhylomeDB:Q9FFG7
            ProtClustDB:CLSN2687234 Genevestigator:Q9FFG7 Uniprot:Q9FFG7
        Length = 403

 Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
 Identities = 185/313 (59%), Positives = 225/313 (71%)

Query:     1 MYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHP 60
             MYKVLQI EG CE  L+ DD +LVR+C SG IYDS PVDFTSDLGAR AVHP+ L MS P
Sbjct:   102 MYKVLQILEGTCETGLNPDDCRLVRNCISGFIYDSCPVDFTSDLGARLAVHPTTLKMSSP 161

Query:    61 PRLVSRIANGIASGLDAFFLNRFESHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVI 120
             P+     ANGIAS LD  FLNRFES RAEYWQTLYS++    PYLILCSE+DDLAPYQ I
Sbjct:   162 PKPFVWAANGIASSLDYVFLNRFESQRAEYWQTLYSTIIMRVPYLILCSENDDLAPYQTI 221

Query:   121 YNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGAVYSQRIQRLERE 180
             +NFA RL +LG +VKLVKWN SPH GHYR+  +DYKAAV+E L KA +VYSQ+ + L+RE
Sbjct:   222 HNFATRLQELGGNVKLVKWNDSPHCGHYRYNQVDYKAAVSEFLSKAASVYSQKTRSLDRE 281

Query:   181 KMGLEGT-HDDMADPMYNLSKAAVSPTRSFRGTSLVPSDHFVLPSSLEYYDGRDVGSLQD 239
              M  +GT HD++ +P+ +L ++     RSF GT LV +DHF +PS++ YY GRD G +QD
Sbjct:   282 AM--KGTCHDEITEPIQSLGQSTSGLNRSFNGTPLVTTDHFFVPSTVGYYVGRDGGYVQD 339

Query:   240 EHKERLIHLPNPP---SINTHGVLGQILFDVCVPKNVEGWDIRSSDSLNGSWYNSSQRRA 296
             EHK+ LI L N     S+  +GVLGQILFDV +PKNVE WDI+ S++          RR 
Sbjct:   340 EHKQDLICLSNTQTNESVKPNGVLGQILFDVYIPKNVEDWDIKLSET-------GRSRRR 392

Query:   297 PFNPIKCMRRSRL 309
             P    + +RRSRL
Sbjct:   393 PGK--RFIRRSRL 403


>TAIR|locus:505006247 [details] [associations]
            symbol:AT2G15695 "AT2G15695" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC006248
            InterPro:IPR008547 PANTHER:PTHR12265 Pfam:PF05705 EMBL:BT015942
            EMBL:BT020436 EMBL:AK226576 IPI:IPI00524620 RefSeq:NP_565378.1
            UniGene:At.26736 UniGene:At.74258 ProteinModelPortal:Q8S8H8
            SMR:Q8S8H8 STRING:Q8S8H8 EnsemblPlants:AT2G15695.1 GeneID:816063
            KEGG:ath:AT2G15695 TAIR:At2g15695 eggNOG:NOG283205
            HOGENOM:HOG000239704 InParanoid:Q8S8H8 OMA:TRFESQR PhylomeDB:Q8S8H8
            ProtClustDB:CLSN2917128 ArrayExpress:Q8S8H8 Genevestigator:Q8S8H8
            Uniprot:Q8S8H8
        Length = 420

 Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
 Identities = 165/316 (52%), Positives = 212/316 (67%)

Query:     1 MYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHP 60
             MYKVLQ+    CEA++  DD QLVR C SG +YDS P+DFTSDL  +FA+HP++  MS P
Sbjct:   110 MYKVLQVIMDDCEAQIHPDDSQLVRTCLSGHVYDSGPLDFTSDLNVKFALHPTIRRMSGP 169

Query:    61 PRLVSRIANGIASGLDAFFLNRFESHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVI 120
              RLVS +A GI+SGLD  +L RFES R+EYWQ LYSSV  GAPYLILCSE+D+LAP QVI
Sbjct:   170 SRLVSWVAKGISSGLDGLYLTRFESQRSEYWQALYSSVEIGAPYLILCSENDELAPLQVI 229

Query:   121 YNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGAVYSQRIQRL-ER 179
              +F  +L +LG +VK+VKW +SPH GHY H PI Y+A ++  L KA +V+  +I++L ER
Sbjct:   230 SSFTHQLQELGGEVKVVKWKNSPHAGHYAHNPIQYRAVISNFLEKAISVHLHKIRQLGER 289

Query:   180 EKMGLEGTHDDMADPMYNLSKAAVSPTRSFRGTSLVPSDHFVLPSSLEYY---DGRDVGS 236
                    THD++++ + +L K AV+  +S R  +  P DHF LPSS  Y    +  D  S
Sbjct:   290 AH-----THDEISELICDLQKVAVNSNQSLRRVATGPCDHFFLPSSAPYQSNSNNSDPSS 344

Query:   237 LQDEHKERLIHLP-NPPSINTHGVLGQILFDVCVPKNVEGWDIRSSDSLNGSWY--NSSQ 293
              Q+E +ER    P  P SIN H VLGQ LFD CVPKN+EGWDIR +  LNG  Y  +SS+
Sbjct:   345 SQEEQRERSSFRPLQPTSINAHSVLGQFLFDSCVPKNIEGWDIRFAGCLNGQPYATSSSR 404

Query:   294 RRAPFNPIKCMRRSRL 309
             + +     K   RSRL
Sbjct:   405 KNSNLGFKKRFFRSRL 420


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.137   0.420    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      309       309   0.00079  116 3  11 22  0.38    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  614 (65 KB)
  Total size of DFA:  241 KB (2131 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.96u 0.15s 25.11t   Elapsed:  00:00:01
  Total cpu time:  24.96u 0.15s 25.11t   Elapsed:  00:00:01
  Start:  Fri May 10 08:08:08 2013   End:  Fri May 10 08:08:09 2013

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