Query 021707
Match_columns 309
No_of_seqs 145 out of 1621
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 08:06:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021707.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021707hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a6d_A Hydroxyindole O-methylt 100.0 3.5E-47 1.2E-51 354.6 21.2 278 4-295 27-315 (353)
2 3p9c_A Caffeic acid O-methyltr 100.0 1.5E-45 5E-50 345.1 26.3 284 4-294 39-333 (364)
3 3reo_A (ISO)eugenol O-methyltr 100.0 2.6E-44 9E-49 337.0 24.7 284 4-294 40-335 (368)
4 3lst_A CALO1 methyltransferase 100.0 1.3E-42 4.4E-47 323.1 26.7 271 4-294 41-316 (348)
5 3gwz_A MMCR; methyltransferase 100.0 8.2E-42 2.8E-46 320.1 21.3 271 4-294 57-336 (369)
6 3i53_A O-methyltransferase; CO 100.0 3.5E-42 1.2E-46 317.9 17.4 269 4-294 24-301 (332)
7 1fp1_D Isoliquiritigenin 2'-O- 100.0 5.2E-41 1.8E-45 314.9 20.7 282 4-294 43-340 (372)
8 1zg3_A Isoflavanone 4'-O-methy 100.0 5.9E-41 2E-45 312.9 20.9 282 4-294 29-327 (358)
9 2ip2_A Probable phenazine-spec 100.0 1.4E-40 4.9E-45 307.1 21.3 268 4-294 27-302 (334)
10 1fp2_A Isoflavone O-methyltran 100.0 2.3E-40 7.8E-45 308.3 22.8 277 4-294 35-321 (352)
11 3dp7_A SAM-dependent methyltra 100.0 2.9E-38 9.8E-43 295.4 20.9 270 4-294 34-322 (363)
12 1qzz_A RDMB, aclacinomycin-10- 100.0 2.1E-38 7.1E-43 296.8 18.7 272 4-294 35-319 (374)
13 1tw3_A COMT, carminomycin 4-O- 100.0 6.5E-38 2.2E-42 292.1 19.2 271 5-294 39-319 (360)
14 3mcz_A O-methyltransferase; ad 100.0 9.2E-37 3.1E-41 283.5 20.0 265 4-294 43-319 (352)
15 2r3s_A Uncharacterized protein 100.0 5.3E-36 1.8E-40 276.2 19.0 267 4-294 25-303 (335)
16 1x19_A CRTF-related protein; m 100.0 3.7E-35 1.2E-39 273.7 23.3 237 4-264 50-301 (359)
17 4gek_A TRNA (CMO5U34)-methyltr 99.7 3.5E-17 1.2E-21 145.8 10.5 107 158-265 68-185 (261)
18 2qm3_A Predicted methyltransfe 99.6 1.7E-15 5.8E-20 141.6 14.1 219 6-261 44-280 (373)
19 3dtn_A Putative methyltransfer 99.6 2.2E-15 7.5E-20 131.0 10.3 115 149-264 33-154 (234)
20 2qe6_A Uncharacterized protein 99.6 1.5E-14 5.3E-19 129.6 11.0 102 160-262 77-200 (274)
21 3ou2_A SAM-dependent methyltra 99.5 2.4E-14 8.3E-19 122.5 10.7 113 148-263 34-151 (218)
22 3ujc_A Phosphoethanolamine N-m 99.5 4E-14 1.4E-18 124.8 9.6 112 149-263 45-164 (266)
23 3hnr_A Probable methyltransfer 99.5 3.8E-14 1.3E-18 121.8 9.1 112 149-264 35-151 (220)
24 1ve3_A Hypothetical protein PH 99.5 2.2E-14 7.5E-19 123.7 6.9 100 160-262 38-146 (227)
25 1vl5_A Unknown conserved prote 99.5 4.4E-14 1.5E-18 124.8 8.7 113 146-264 24-146 (260)
26 1pjz_A Thiopurine S-methyltran 99.5 6E-14 2E-18 119.9 8.2 107 150-260 13-142 (203)
27 4hg2_A Methyltransferase type 99.5 8.2E-14 2.8E-18 123.7 9.0 98 160-263 39-140 (257)
28 3dli_A Methyltransferase; PSI- 99.5 1.7E-13 5.9E-18 119.6 10.2 106 151-261 32-143 (240)
29 3jwh_A HEN1; methyltransferase 99.5 1E-13 3.6E-18 119.1 8.2 100 159-259 28-142 (217)
30 1xtp_A LMAJ004091AAA; SGPP, st 99.5 1.1E-13 3.6E-18 121.5 8.0 112 149-263 83-202 (254)
31 1nkv_A Hypothetical protein YJ 99.4 1.5E-13 5.1E-18 120.8 8.5 113 148-265 25-147 (256)
32 3dlc_A Putative S-adenosyl-L-m 99.4 8.6E-14 3E-18 118.9 6.7 109 149-263 34-153 (219)
33 3jwg_A HEN1, methyltransferase 99.4 1.5E-13 5.3E-18 118.1 8.0 99 159-258 28-141 (219)
34 3ggd_A SAM-dependent methyltra 99.4 2E-13 6.8E-18 119.4 8.7 103 158-263 54-168 (245)
35 1kpg_A CFA synthase;, cyclopro 99.4 3.2E-13 1.1E-17 121.0 9.9 111 149-263 54-173 (287)
36 3hem_A Cyclopropane-fatty-acyl 99.4 3.9E-13 1.3E-17 121.6 10.4 112 149-264 62-189 (302)
37 3ege_A Putative methyltransfer 99.4 7.6E-13 2.6E-17 117.2 12.1 109 148-263 23-135 (261)
38 2xvm_A Tellurite resistance pr 99.4 3.3E-13 1.1E-17 113.7 9.0 111 149-263 22-141 (199)
39 3vc1_A Geranyl diphosphate 2-C 99.4 4.2E-13 1.4E-17 122.0 10.2 112 148-264 105-227 (312)
40 3dh0_A SAM dependent methyltra 99.4 3.6E-13 1.2E-17 115.6 9.1 113 148-264 26-149 (219)
41 1xxl_A YCGJ protein; structura 99.4 2.6E-13 9E-18 118.5 8.4 111 148-264 10-130 (239)
42 2fk8_A Methoxy mycolic acid sy 99.4 5E-13 1.7E-17 121.6 10.5 111 149-263 80-199 (318)
43 3gu3_A Methyltransferase; alph 99.4 2.7E-13 9.1E-18 121.7 8.3 108 150-260 12-128 (284)
44 2p35_A Trans-aconitate 2-methy 99.4 3.6E-13 1.2E-17 118.4 8.6 108 149-260 23-134 (259)
45 3pfg_A N-methyltransferase; N, 99.4 4.6E-13 1.6E-17 118.4 9.2 102 159-263 49-156 (263)
46 2p7i_A Hypothetical protein; p 99.4 2E-13 6.8E-18 118.9 6.7 98 159-261 41-144 (250)
47 2o57_A Putative sarcosine dime 99.4 2.9E-13 1E-17 121.8 8.0 111 149-264 68-193 (297)
48 3g07_A 7SK snRNA methylphospha 99.4 2.6E-13 8.9E-18 122.5 7.4 100 159-259 45-221 (292)
49 3h2b_A SAM-dependent methyltra 99.4 1.9E-13 6.4E-18 116.1 5.7 100 161-263 42-146 (203)
50 3bus_A REBM, methyltransferase 99.4 5.8E-13 2E-17 118.2 8.8 112 148-264 50-172 (273)
51 3e23_A Uncharacterized protein 99.4 4.5E-13 1.6E-17 114.5 7.5 102 158-262 41-145 (211)
52 3uwp_A Histone-lysine N-methyl 99.4 6.4E-13 2.2E-17 124.1 9.1 113 148-265 162-295 (438)
53 3f4k_A Putative methyltransfer 99.4 7.4E-13 2.5E-17 116.4 8.4 110 150-264 36-156 (257)
54 3kkz_A Uncharacterized protein 99.4 7.8E-13 2.7E-17 117.3 8.5 110 151-265 37-157 (267)
55 3lcc_A Putative methyl chlorid 99.4 5.9E-13 2E-17 115.8 7.4 99 162-263 68-176 (235)
56 3mgg_A Methyltransferase; NYSG 99.4 6E-13 2.1E-17 118.4 7.7 101 158-261 35-145 (276)
57 3ccf_A Cyclopropane-fatty-acyl 99.4 7.3E-13 2.5E-17 118.3 8.2 109 147-261 45-157 (279)
58 3ofk_A Nodulation protein S; N 99.4 8.4E-13 2.9E-17 113.1 8.1 99 158-259 49-155 (216)
59 3g5l_A Putative S-adenosylmeth 99.4 9.3E-13 3.2E-17 115.7 8.5 105 149-258 34-145 (253)
60 3g5t_A Trans-aconitate 3-methy 99.4 1.6E-12 5.6E-17 117.3 10.1 97 159-259 35-150 (299)
61 2ex4_A Adrenal gland protein A 99.4 3.8E-13 1.3E-17 117.5 5.6 102 160-263 79-190 (241)
62 3bxo_A N,N-dimethyltransferase 99.4 1.9E-12 6.6E-17 112.3 10.1 103 159-264 39-147 (239)
63 3bkw_A MLL3908 protein, S-aden 99.4 1.7E-12 5.8E-17 112.9 9.0 106 149-259 33-145 (243)
64 4fsd_A Arsenic methyltransfera 99.4 1.3E-12 4.3E-17 122.4 8.7 103 159-264 82-209 (383)
65 3ocj_A Putative exported prote 99.4 4.9E-13 1.7E-17 121.2 5.5 106 158-264 116-233 (305)
66 1af7_A Chemotaxis receptor met 99.3 2.4E-12 8.2E-17 115.2 9.8 96 161-257 106-251 (274)
67 3g2m_A PCZA361.24; SAM-depende 99.3 1.2E-12 4E-17 118.2 7.9 111 147-262 71-194 (299)
68 3i9f_A Putative type 11 methyl 99.3 4.3E-13 1.5E-17 110.6 4.5 107 151-265 9-119 (170)
69 3l8d_A Methyltransferase; stru 99.3 3.4E-12 1.2E-16 111.0 10.4 100 159-263 52-158 (242)
70 2p8j_A S-adenosylmethionine-de 99.3 1.2E-12 4.2E-17 111.3 7.1 104 159-264 22-134 (209)
71 2gb4_A Thiopurine S-methyltran 99.3 9.4E-13 3.2E-17 116.5 6.5 99 159-260 67-193 (252)
72 3m70_A Tellurite resistance pr 99.3 1.5E-12 5.2E-17 116.6 7.8 111 149-263 110-228 (286)
73 2yqz_A Hypothetical protein TT 99.3 3.3E-12 1.1E-16 112.4 9.5 95 158-257 37-140 (263)
74 3e05_A Precorrin-6Y C5,15-meth 99.3 6.7E-12 2.3E-16 106.7 10.8 106 149-261 30-145 (204)
75 4htf_A S-adenosylmethionine-de 99.3 1.7E-12 5.8E-17 116.2 6.1 104 150-260 60-175 (285)
76 3sm3_A SAM-dependent methyltra 99.3 5.3E-12 1.8E-16 109.0 9.0 102 159-263 29-146 (235)
77 3hm2_A Precorrin-6Y C5,15-meth 99.3 3.4E-12 1.2E-16 105.6 7.0 105 150-263 16-132 (178)
78 3cgg_A SAM-dependent methyltra 99.3 1.7E-11 5.9E-16 102.4 11.3 108 149-261 37-150 (195)
79 3thr_A Glycine N-methyltransfe 99.3 2.5E-12 8.6E-17 115.3 6.1 106 151-260 49-177 (293)
80 2pxx_A Uncharacterized protein 99.3 7.1E-12 2.4E-16 106.7 8.1 102 159-262 41-163 (215)
81 3d2l_A SAM-dependent methyltra 99.3 7.3E-12 2.5E-16 108.9 8.1 93 160-256 33-135 (243)
82 3iv6_A Putative Zn-dependent a 99.3 8.4E-12 2.9E-16 110.8 8.2 108 147-259 33-149 (261)
83 3bkx_A SAM-dependent methyltra 99.3 9.9E-12 3.4E-16 110.3 8.7 112 149-264 33-165 (275)
84 1wzn_A SAM-dependent methyltra 99.3 1.2E-11 4.2E-16 108.3 9.0 106 149-258 31-145 (252)
85 3cc8_A Putative methyltransfer 99.2 1.5E-11 5.2E-16 105.6 8.8 106 147-260 21-132 (230)
86 1y8c_A S-adenosylmethionine-de 99.2 8.9E-12 3E-16 108.3 7.1 95 160-257 37-141 (246)
87 2gs9_A Hypothetical protein TT 99.2 1.7E-11 5.8E-16 104.5 7.8 101 151-261 29-135 (211)
88 3e8s_A Putative SAM dependent 99.2 6.9E-12 2.4E-16 107.5 5.2 107 150-263 43-157 (227)
89 2pjd_A Ribosomal RNA small sub 99.2 8.5E-12 2.9E-16 115.1 5.8 111 148-260 185-305 (343)
90 1dus_A MJ0882; hypothetical pr 99.2 3.8E-11 1.3E-15 100.2 8.9 109 148-261 41-160 (194)
91 2aot_A HMT, histamine N-methyl 99.2 5.5E-12 1.9E-16 113.5 4.0 98 160-260 52-174 (292)
92 4dcm_A Ribosomal RNA large sub 99.2 2.5E-11 8.4E-16 113.4 8.3 107 150-258 213-334 (375)
93 3bgv_A MRNA CAP guanine-N7 met 99.2 1.9E-11 6.5E-16 111.0 7.1 100 159-260 33-157 (313)
94 1ri5_A MRNA capping enzyme; me 99.2 2.1E-11 7E-16 109.3 7.2 101 158-260 62-176 (298)
95 3mti_A RRNA methylase; SAM-dep 99.2 3E-11 1E-15 100.9 7.5 103 158-263 20-140 (185)
96 3mq2_A 16S rRNA methyltransfer 99.2 2.7E-11 9.2E-16 103.9 7.2 103 151-257 19-139 (218)
97 1u2z_A Histone-lysine N-methyl 99.2 8.8E-11 3E-15 111.2 11.1 112 148-264 231-365 (433)
98 1nt2_A Fibrillarin-like PRE-rR 99.2 6E-11 2.1E-15 101.9 8.8 96 158-258 55-161 (210)
99 2kw5_A SLR1183 protein; struct 99.2 6.5E-11 2.2E-15 100.1 8.8 107 148-263 21-136 (202)
100 3q87_B N6 adenine specific DNA 99.2 7.1E-11 2.4E-15 97.8 8.8 95 160-262 23-127 (170)
101 3giw_A Protein of unknown func 99.2 9.2E-11 3.1E-15 104.4 10.0 103 160-263 78-205 (277)
102 3dxy_A TRNA (guanine-N(7)-)-me 99.2 1.4E-11 4.9E-16 106.4 4.7 97 160-258 34-150 (218)
103 3htx_A HEN1; HEN1, small RNA m 99.2 6.6E-11 2.3E-15 118.4 9.7 101 159-261 720-837 (950)
104 3fpf_A Mtnas, putative unchara 99.2 3.8E-11 1.3E-15 108.0 7.1 94 158-258 120-222 (298)
105 3tfw_A Putative O-methyltransf 99.2 3.5E-11 1.2E-15 105.9 6.7 99 158-262 61-174 (248)
106 2vdw_A Vaccinia virus capping 99.2 2.4E-11 8.1E-16 110.2 5.8 98 160-259 48-170 (302)
107 4dzr_A Protein-(glutamine-N5) 99.1 5.7E-12 1.9E-16 107.2 1.3 111 149-260 19-166 (215)
108 3p2e_A 16S rRNA methylase; met 99.1 6.3E-11 2.2E-15 102.9 7.6 106 149-258 15-139 (225)
109 1fbn_A MJ fibrillarin homologu 99.1 1.9E-10 6.4E-15 99.8 10.5 94 158-257 72-177 (230)
110 1o9g_A RRNA methyltransferase; 99.1 9.8E-11 3.4E-15 102.8 8.8 101 160-261 51-217 (250)
111 2fca_A TRNA (guanine-N(7)-)-me 99.1 5.5E-11 1.9E-15 102.2 6.9 97 160-258 38-153 (213)
112 1zx0_A Guanidinoacetate N-meth 99.1 1.4E-11 4.9E-16 107.2 3.1 100 159-260 59-172 (236)
113 3njr_A Precorrin-6Y methylase; 99.1 1.5E-10 5.2E-15 98.8 9.5 101 150-261 46-157 (204)
114 1yb2_A Hypothetical protein TA 99.1 5.9E-11 2E-15 105.9 7.2 103 150-261 101-214 (275)
115 1yzh_A TRNA (guanine-N(7)-)-me 99.1 1.4E-10 4.8E-15 99.4 9.1 96 160-257 41-155 (214)
116 3orh_A Guanidinoacetate N-meth 99.1 1.1E-11 3.6E-16 108.4 2.0 97 159-259 59-171 (236)
117 3mb5_A SAM-dependent methyltra 99.1 3.6E-11 1.2E-15 105.7 5.4 104 149-261 83-197 (255)
118 3b3j_A Histone-arginine methyl 99.1 5.5E-11 1.9E-15 114.4 6.9 106 148-256 147-261 (480)
119 2y1w_A Histone-arginine methyl 99.1 3.7E-11 1.3E-15 111.0 5.4 105 150-257 41-154 (348)
120 2zfu_A Nucleomethylin, cerebra 99.1 1.3E-10 4.6E-15 99.3 8.4 99 148-263 55-156 (215)
121 1vlm_A SAM-dependent methyltra 99.1 1.1E-10 3.7E-15 100.4 7.5 91 161-261 48-142 (219)
122 2a14_A Indolethylamine N-methy 99.1 9.1E-12 3.1E-16 110.5 0.7 100 159-260 54-199 (263)
123 3fzg_A 16S rRNA methylase; met 99.1 1.9E-11 6.5E-16 102.7 2.5 95 159-258 48-152 (200)
124 2avn_A Ubiquinone/menaquinone 99.1 9.2E-11 3.2E-15 103.5 7.0 97 160-260 54-154 (260)
125 2i62_A Nicotinamide N-methyltr 99.1 1.5E-11 5.1E-16 108.3 1.8 100 159-260 55-200 (265)
126 2b3t_A Protein methyltransfera 99.1 1.3E-10 4.5E-15 103.6 7.9 107 149-258 100-238 (276)
127 3eey_A Putative rRNA methylase 99.1 8.6E-11 2.9E-15 99.1 6.1 106 158-264 20-145 (197)
128 1jsx_A Glucose-inhibited divis 99.1 3.7E-11 1.3E-15 102.1 3.7 92 161-259 66-166 (207)
129 3ckk_A TRNA (guanine-N(7)-)-me 99.1 1.7E-10 5.7E-15 100.9 7.6 98 159-258 45-168 (235)
130 3lbf_A Protein-L-isoaspartate 99.1 1.3E-10 4.4E-15 99.0 6.5 100 149-260 67-176 (210)
131 3grz_A L11 mtase, ribosomal pr 99.1 6E-11 2.1E-15 100.8 4.3 97 159-262 59-163 (205)
132 2plw_A Ribosomal RNA methyltra 99.1 5.6E-10 1.9E-14 94.2 10.3 103 151-258 13-154 (201)
133 1ej0_A FTSJ; methyltransferase 99.1 3.3E-10 1.1E-14 92.8 8.7 108 150-262 12-140 (180)
134 2pwy_A TRNA (adenine-N(1)-)-me 99.1 2.5E-10 8.4E-15 100.2 8.4 103 150-261 87-201 (258)
135 2yxe_A Protein-L-isoaspartate 99.1 1.7E-10 5.6E-15 98.7 6.9 100 149-258 67-177 (215)
136 2vdv_E TRNA (guanine-N(7)-)-me 99.1 1.9E-10 6.4E-15 100.9 6.6 94 158-257 47-172 (246)
137 3ntv_A MW1564 protein; rossman 99.1 8.9E-11 3E-15 102.1 4.5 99 159-263 70-181 (232)
138 2bm8_A Cephalosporin hydroxyla 99.0 3.8E-10 1.3E-14 98.6 8.3 93 161-259 82-188 (236)
139 3duw_A OMT, O-methyltransferas 99.0 1.2E-10 4.1E-15 100.2 4.9 98 159-262 57-171 (223)
140 2g72_A Phenylethanolamine N-me 99.0 4.1E-11 1.4E-15 107.5 2.0 99 160-260 71-217 (289)
141 3p9n_A Possible methyltransfer 99.0 3.2E-10 1.1E-14 95.1 7.4 101 160-263 44-158 (189)
142 3u81_A Catechol O-methyltransf 99.0 1.2E-10 4E-15 100.5 4.0 101 159-263 57-175 (221)
143 1jg1_A PIMT;, protein-L-isoasp 99.0 2.7E-10 9.2E-15 99.1 6.2 102 147-259 79-190 (235)
144 4e2x_A TCAB9; kijanose, tetron 99.0 1.6E-10 5.5E-15 109.0 5.0 106 148-260 96-210 (416)
145 2ipx_A RRNA 2'-O-methyltransfe 99.0 4.7E-10 1.6E-14 97.3 7.6 95 158-257 75-181 (233)
146 1g8a_A Fibrillarin-like PRE-rR 99.0 9.5E-10 3.3E-14 94.9 9.5 95 158-257 71-177 (227)
147 2gpy_A O-methyltransferase; st 99.0 2.3E-10 8E-15 99.2 5.5 99 159-263 53-165 (233)
148 2ozv_A Hypothetical protein AT 99.0 5.7E-10 2E-14 98.8 8.1 100 158-258 34-170 (260)
149 1l3i_A Precorrin-6Y methyltran 99.0 1.5E-10 5.2E-15 96.4 4.0 102 150-260 24-136 (192)
150 3evz_A Methyltransferase; NYSG 99.0 3.8E-10 1.3E-14 97.4 6.7 99 158-258 53-179 (230)
151 2yxd_A Probable cobalt-precorr 99.0 3.2E-10 1.1E-14 93.8 5.9 100 149-260 25-133 (183)
152 2fyt_A Protein arginine N-meth 99.0 5.7E-10 2E-14 102.7 7.9 102 151-255 56-168 (340)
153 1xdz_A Methyltransferase GIDB; 99.0 1E-10 3.5E-15 102.1 2.5 94 159-259 69-175 (240)
154 3tr6_A O-methyltransferase; ce 99.0 1.6E-10 5.4E-15 99.5 3.5 98 160-263 64-179 (225)
155 1vbf_A 231AA long hypothetical 99.0 5.1E-10 1.7E-14 96.7 6.7 100 148-259 59-166 (231)
156 3kr9_A SAM-dependent methyltra 99.0 4.9E-10 1.7E-14 97.1 6.5 96 159-259 14-120 (225)
157 1nv8_A HEMK protein; class I a 99.0 5.6E-10 1.9E-14 100.3 6.9 94 160-256 123-247 (284)
158 4df3_A Fibrillarin-like rRNA/T 99.0 3.2E-09 1.1E-13 92.4 11.4 108 150-262 65-186 (233)
159 3q7e_A Protein arginine N-meth 99.0 4.2E-10 1.4E-14 104.0 5.9 94 160-255 66-170 (349)
160 1o54_A SAM-dependent O-methylt 99.0 6E-10 2E-14 99.3 6.6 104 149-261 102-216 (277)
161 3gjy_A Spermidine synthase; AP 99.0 3.4E-10 1.2E-14 102.9 5.0 97 162-259 91-201 (317)
162 3adn_A Spermidine synthase; am 99.0 6.9E-10 2.4E-14 100.2 6.9 99 159-258 82-198 (294)
163 2esr_A Methyltransferase; stru 99.0 1.9E-10 6.5E-15 95.3 2.9 109 149-262 20-142 (177)
164 1dl5_A Protein-L-isoaspartate 99.0 7E-10 2.4E-14 101.1 6.8 102 148-259 64-176 (317)
165 3m33_A Uncharacterized protein 99.0 2.6E-10 8.8E-15 98.6 3.6 86 159-255 47-139 (226)
166 3lpm_A Putative methyltransfer 99.0 7.9E-10 2.7E-14 97.6 6.6 98 158-257 46-175 (259)
167 3r3h_A O-methyltransferase, SA 98.9 2E-10 6.7E-15 100.8 2.6 98 160-263 60-175 (242)
168 3g89_A Ribosomal RNA small sub 98.9 2.5E-10 8.4E-15 100.7 2.9 95 159-260 79-186 (249)
169 3dmg_A Probable ribosomal RNA 98.9 9.9E-10 3.4E-14 102.7 6.9 96 160-258 233-340 (381)
170 3c3p_A Methyltransferase; NP_9 98.9 2.5E-10 8.5E-15 97.5 2.6 97 160-262 56-164 (210)
171 3r0q_C Probable protein argini 98.9 5.8E-10 2E-14 104.1 5.3 101 158-260 61-171 (376)
172 2fhp_A Methylase, putative; al 98.9 5.1E-10 1.8E-14 93.1 4.3 101 158-263 42-159 (187)
173 3sso_A Methyltransferase; macr 98.9 6.4E-10 2.2E-14 103.7 5.3 103 149-260 207-326 (419)
174 1p91_A Ribosomal RNA large sub 98.9 9.3E-10 3.2E-14 97.3 6.1 94 159-262 84-182 (269)
175 2hnk_A SAM-dependent O-methylt 98.9 6.4E-10 2.2E-14 96.9 4.8 99 159-263 59-186 (239)
176 3dou_A Ribosomal RNA large sub 98.9 1.9E-09 6.7E-14 91.0 7.6 103 150-259 15-140 (191)
177 2nyu_A Putative ribosomal RNA 98.9 1.5E-09 5.1E-14 91.1 6.8 105 151-260 13-147 (196)
178 3bwc_A Spermidine synthase; SA 98.9 4.1E-10 1.4E-14 102.1 3.5 100 159-259 94-211 (304)
179 3dr5_A Putative O-methyltransf 98.9 8.7E-10 3E-14 95.4 5.2 96 161-262 57-167 (221)
180 1sui_A Caffeoyl-COA O-methyltr 98.9 7.3E-10 2.5E-14 97.4 4.4 99 159-263 78-195 (247)
181 2yvl_A TRMI protein, hypotheti 98.9 7.4E-09 2.5E-13 90.1 10.7 101 150-261 82-193 (248)
182 3lec_A NADB-rossmann superfami 98.9 1.7E-09 5.8E-14 93.9 6.5 95 159-258 20-125 (230)
183 2ift_A Putative methylase HI07 98.9 4E-10 1.4E-14 95.9 2.3 97 161-262 54-167 (201)
184 3id6_C Fibrillarin-like rRNA/T 98.9 5.6E-09 1.9E-13 90.9 9.6 105 149-258 63-181 (232)
185 1g6q_1 HnRNP arginine N-methyl 98.9 1.3E-09 4.6E-14 99.8 5.7 94 160-255 38-142 (328)
186 2avd_A Catechol-O-methyltransf 98.9 7.1E-10 2.4E-14 95.6 3.7 98 159-262 68-183 (229)
187 2frn_A Hypothetical protein PH 98.9 1E-09 3.6E-14 98.1 4.8 95 159-261 124-228 (278)
188 3tma_A Methyltransferase; thum 98.9 3.9E-09 1.3E-13 97.5 8.7 110 148-259 192-318 (354)
189 3gnl_A Uncharacterized protein 98.9 2.8E-09 9.5E-14 93.3 7.2 95 159-258 20-125 (244)
190 1r18_A Protein-L-isoaspartate( 98.9 1.6E-09 5.3E-14 93.6 5.4 100 150-258 73-194 (227)
191 2oxt_A Nucleoside-2'-O-methylt 98.9 6.2E-09 2.1E-13 92.5 9.4 98 158-260 72-187 (265)
192 1i9g_A Hypothetical protein RV 98.9 2.9E-09 1E-13 94.7 7.2 104 149-261 89-206 (280)
193 1ws6_A Methyltransferase; stru 98.9 5.8E-10 2E-14 91.3 2.4 95 160-261 41-150 (171)
194 2wa2_A Non-structural protein 98.9 5.4E-09 1.8E-13 93.5 8.5 98 158-260 80-195 (276)
195 2nxc_A L11 mtase, ribosomal pr 98.8 8.9E-10 3E-14 97.2 3.1 96 159-262 119-222 (254)
196 2pbf_A Protein-L-isoaspartate 98.8 4.4E-09 1.5E-13 90.6 7.2 93 158-259 78-194 (227)
197 2i7c_A Spermidine synthase; tr 98.8 1.3E-09 4.4E-14 97.8 3.7 100 158-258 76-192 (283)
198 3c3y_A Pfomt, O-methyltransfer 98.8 1.5E-09 5.3E-14 94.7 4.0 98 159-262 69-185 (237)
199 3hp7_A Hemolysin, putative; st 98.8 4.9E-09 1.7E-13 94.2 7.2 101 149-257 74-184 (291)
200 2h00_A Methyltransferase 10 do 98.8 1.9E-10 6.4E-15 101.1 -2.0 100 160-260 65-194 (254)
201 3cbg_A O-methyltransferase; cy 98.8 1.1E-09 3.8E-14 95.2 2.9 97 160-262 72-186 (232)
202 3bzb_A Uncharacterized protein 98.8 9.6E-09 3.3E-13 91.9 8.7 95 159-257 78-204 (281)
203 1mjf_A Spermidine synthase; sp 98.8 1.9E-09 6.5E-14 96.6 4.0 97 160-258 75-193 (281)
204 1iy9_A Spermidine synthase; ro 98.8 1.7E-09 5.8E-14 96.6 3.6 98 160-258 75-189 (275)
205 2b25_A Hypothetical protein; s 98.8 5.5E-09 1.9E-13 95.7 7.1 103 149-260 95-221 (336)
206 1uir_A Polyamine aminopropyltr 98.8 2.5E-09 8.6E-14 97.4 4.4 98 160-258 77-195 (314)
207 2p41_A Type II methyltransfera 98.8 8.8E-09 3E-13 93.4 7.9 96 158-257 80-190 (305)
208 3opn_A Putative hemolysin; str 98.8 2.9E-09 1E-13 92.8 4.4 96 149-257 26-136 (232)
209 2pt6_A Spermidine synthase; tr 98.8 2.6E-09 8.9E-14 97.6 4.1 98 160-258 116-230 (321)
210 1xj5_A Spermidine synthase 1; 98.8 2.2E-09 7.5E-14 98.6 3.3 99 158-257 118-234 (334)
211 2o07_A Spermidine synthase; st 98.8 2.7E-09 9.1E-14 96.8 3.6 100 158-258 93-209 (304)
212 2b2c_A Spermidine synthase; be 98.8 2.6E-09 9E-14 97.3 3.5 98 160-258 108-222 (314)
213 3gdh_A Trimethylguanosine synt 98.8 1.3E-10 4.3E-15 101.3 -5.2 93 160-257 78-180 (241)
214 3lcv_B Sisomicin-gentamicin re 98.8 2.2E-09 7.4E-14 94.3 2.7 104 159-264 131-244 (281)
215 1zq9_A Probable dimethyladenos 98.8 4.2E-09 1.4E-13 94.6 4.5 102 148-254 17-143 (285)
216 1ne2_A Hypothetical protein TA 98.8 7.8E-09 2.7E-13 87.3 5.9 94 158-257 49-145 (200)
217 1i1n_A Protein-L-isoaspartate 98.8 8.2E-09 2.8E-13 88.8 6.1 93 158-259 75-183 (226)
218 1ixk_A Methyltransferase; open 98.8 9.9E-09 3.4E-13 93.4 6.9 110 151-262 110-250 (315)
219 3a27_A TYW2, uncharacterized p 98.8 3.2E-09 1.1E-13 94.7 3.5 100 158-264 117-225 (272)
220 2fpo_A Methylase YHHF; structu 98.8 4.4E-09 1.5E-13 89.4 4.2 96 161-261 55-163 (202)
221 2cmg_A Spermidine synthase; tr 98.7 1.4E-08 4.8E-13 90.0 7.0 89 159-257 71-170 (262)
222 1inl_A Spermidine synthase; be 98.7 4E-09 1.4E-13 95.3 3.2 98 160-258 90-205 (296)
223 3frh_A 16S rRNA methylase; met 98.7 2.8E-08 9.4E-13 86.4 6.9 96 158-258 103-206 (253)
224 4hc4_A Protein arginine N-meth 98.7 1.9E-08 6.6E-13 93.5 5.8 93 161-255 84-186 (376)
225 2yxl_A PH0851 protein, 450AA l 98.6 4.9E-08 1.7E-12 93.2 8.5 111 152-264 252-395 (450)
226 3ajd_A Putative methyltransfer 98.6 1.9E-08 6.4E-13 89.7 5.0 109 153-263 77-216 (274)
227 4azs_A Methyltransferase WBDD; 98.6 7.2E-09 2.5E-13 101.8 1.8 103 159-264 65-179 (569)
228 2ih2_A Modification methylase 98.6 8.1E-08 2.8E-12 90.3 8.6 107 149-260 29-166 (421)
229 2f8l_A Hypothetical protein LM 98.6 2.9E-08 1E-12 91.3 5.4 99 160-259 130-257 (344)
230 1wy7_A Hypothetical protein PH 98.6 8.6E-08 2.9E-12 81.1 7.5 94 159-257 48-147 (207)
231 1yub_A Ermam, rRNA methyltrans 98.6 1.5E-08 5.1E-13 88.7 2.4 110 147-260 17-147 (245)
232 2ld4_A Anamorsin; methyltransf 98.6 1.1E-08 3.8E-13 84.5 0.9 87 158-263 10-106 (176)
233 1qam_A ERMC' methyltransferase 98.6 6.5E-08 2.2E-12 84.8 5.8 83 148-234 19-108 (244)
234 2h1r_A Dimethyladenosine trans 98.5 7E-08 2.4E-12 87.1 5.5 101 147-252 30-153 (299)
235 2igt_A SAM dependent methyltra 98.5 4.2E-08 1.4E-12 89.9 3.8 100 160-262 153-276 (332)
236 3m6w_A RRNA methylase; rRNA me 98.5 7E-08 2.4E-12 92.1 4.5 108 151-261 93-232 (464)
237 1sqg_A SUN protein, FMU protei 98.5 2.3E-07 7.9E-12 87.9 7.9 110 152-263 239-379 (429)
238 2frx_A Hypothetical protein YE 98.5 3.4E-07 1.2E-11 87.9 8.5 103 160-263 117-251 (479)
239 3k6r_A Putative transferase PH 98.4 9.2E-08 3.2E-12 85.4 3.7 98 158-263 123-230 (278)
240 2yx1_A Hypothetical protein MJ 98.4 1.9E-07 6.4E-12 85.7 3.9 94 159-262 194-295 (336)
241 2xyq_A Putative 2'-O-methyl tr 98.4 6.2E-07 2.1E-11 80.5 7.1 95 158-261 61-174 (290)
242 3k0b_A Predicted N6-adenine-sp 98.4 6.1E-07 2.1E-11 84.0 7.3 110 148-259 190-351 (393)
243 3tm4_A TRNA (guanine N2-)-meth 98.3 3.1E-07 1E-11 85.5 4.8 97 158-257 215-328 (373)
244 3ldg_A Putative uncharacterize 98.3 1.8E-06 6.2E-11 80.6 9.9 110 148-259 183-344 (384)
245 3m4x_A NOL1/NOP2/SUN family pr 98.3 3E-07 1E-11 87.6 4.3 110 151-262 97-238 (456)
246 2as0_A Hypothetical protein PH 98.3 1.6E-07 5.4E-12 88.0 2.2 100 160-261 217-338 (396)
247 1wxx_A TT1595, hypothetical pr 98.3 1.6E-07 5.5E-12 87.6 2.2 99 160-261 209-328 (382)
248 2b78_A Hypothetical protein SM 98.2 3.2E-07 1.1E-11 85.7 2.7 99 159-259 211-332 (385)
249 3ldu_A Putative methylase; str 98.2 1.9E-06 6.5E-11 80.5 7.5 110 148-259 184-345 (385)
250 2okc_A Type I restriction enzy 98.2 7.7E-07 2.6E-11 84.7 4.8 110 148-259 160-308 (445)
251 4gqb_A Protein arginine N-meth 98.2 1.7E-06 5.9E-11 85.2 6.8 126 122-255 323-464 (637)
252 3ftd_A Dimethyladenosine trans 98.2 2.8E-06 9.7E-11 74.6 7.6 85 148-235 20-110 (249)
253 3c0k_A UPF0064 protein YCCW; P 98.2 4.4E-07 1.5E-11 85.0 2.2 97 160-259 220-340 (396)
254 1uwv_A 23S rRNA (uracil-5-)-me 98.2 3E-06 1E-10 80.3 8.0 99 149-257 276-388 (433)
255 3gru_A Dimethyladenosine trans 98.2 2.5E-06 8.5E-11 76.8 6.5 89 148-241 39-135 (295)
256 2jjq_A Uncharacterized RNA met 98.1 3.5E-06 1.2E-10 79.7 7.5 89 160-257 290-386 (425)
257 4dmg_A Putative uncharacterize 98.1 2E-06 7E-11 80.5 5.5 101 160-263 214-331 (393)
258 2qfm_A Spermine synthase; sper 98.1 1.4E-06 4.8E-11 80.2 3.9 98 159-258 187-314 (364)
259 3o4f_A Spermidine synthase; am 98.1 2.5E-06 8.5E-11 76.4 5.2 98 159-258 82-198 (294)
260 3b5i_A S-adenosyl-L-methionine 98.1 1.5E-05 5.1E-10 74.0 10.5 102 161-263 53-230 (374)
261 3fut_A Dimethyladenosine trans 98.1 3.9E-06 1.3E-10 74.6 6.2 91 148-243 36-133 (271)
262 3uzu_A Ribosomal RNA small sub 98.0 1.5E-06 5.1E-11 77.7 2.4 67 148-216 31-102 (279)
263 1qyr_A KSGA, high level kasuga 98.0 7.6E-06 2.6E-10 71.9 6.5 91 147-241 9-111 (252)
264 3v97_A Ribosomal RNA large sub 98.0 3.8E-06 1.3E-10 84.3 4.8 99 160-260 539-659 (703)
265 3ua3_A Protein arginine N-meth 98.0 5.4E-06 1.8E-10 82.0 5.0 126 122-255 378-531 (745)
266 3tqs_A Ribosomal RNA small sub 98.0 4.9E-06 1.7E-10 73.3 4.2 65 148-216 18-87 (255)
267 1m6y_A S-adenosyl-methyltransf 97.9 1.2E-05 4E-10 72.6 5.5 77 148-226 15-105 (301)
268 3v97_A Ribosomal RNA large sub 97.8 3.2E-05 1.1E-09 77.6 8.0 109 148-258 179-347 (703)
269 2efj_A 3,7-dimethylxanthine me 97.8 4.6E-05 1.6E-09 70.8 8.0 103 161-264 53-231 (384)
270 2r6z_A UPF0341 protein in RSP 97.8 2.8E-05 9.5E-10 68.5 6.0 99 158-261 81-219 (258)
271 3bt7_A TRNA (uracil-5-)-methyl 97.8 5.5E-06 1.9E-10 76.8 1.1 88 161-259 214-327 (369)
272 1rjd_A PPM1P, carboxy methyl t 97.7 6.9E-05 2.4E-09 68.5 7.8 103 160-264 97-238 (334)
273 1m6e_X S-adenosyl-L-methionnin 97.7 7.5E-05 2.6E-09 68.8 7.7 105 159-264 50-215 (359)
274 3evf_A RNA-directed RNA polyme 97.7 7.8E-05 2.7E-09 65.7 7.2 102 158-261 72-186 (277)
275 2dul_A N(2),N(2)-dimethylguano 97.7 3.6E-05 1.2E-09 71.6 5.2 91 161-258 48-164 (378)
276 2b9e_A NOL1/NOP2/SUN domain fa 97.6 0.00012 4E-09 66.3 7.7 104 153-259 96-235 (309)
277 3axs_A Probable N(2),N(2)-dime 97.6 1.7E-05 5.8E-10 74.1 1.4 93 160-258 52-158 (392)
278 2ar0_A M.ecoki, type I restric 97.5 7E-05 2.4E-09 72.9 5.1 110 148-259 158-313 (541)
279 2k4m_A TR8_protein, UPF0146 pr 97.3 0.00038 1.3E-08 55.5 6.1 85 159-261 34-124 (153)
280 2qy6_A UPF0209 protein YFCK; s 97.3 0.0001 3.4E-09 64.9 2.7 97 160-257 60-212 (257)
281 4auk_A Ribosomal RNA large sub 97.3 0.00097 3.3E-08 61.4 9.1 99 158-262 209-310 (375)
282 3s1s_A Restriction endonucleas 97.2 0.00076 2.6E-08 67.9 8.2 101 158-259 319-466 (878)
283 3gcz_A Polyprotein; flavivirus 97.2 0.00027 9.3E-09 62.3 4.3 106 149-256 80-199 (282)
284 3c6k_A Spermine synthase; sper 97.1 0.00022 7.6E-09 65.9 2.9 96 160-257 205-330 (381)
285 2oyr_A UPF0341 protein YHIQ; a 97.0 0.00033 1.1E-08 61.6 3.5 78 150-231 77-176 (258)
286 3khk_A Type I restriction-modi 97.0 0.00026 9E-09 68.9 2.9 108 148-258 234-395 (544)
287 3eld_A Methyltransferase; flav 97.0 0.0019 6.5E-08 57.4 8.0 99 158-257 79-190 (300)
288 1xmk_A Double-stranded RNA-spe 97.0 0.0004 1.4E-08 49.5 2.7 64 4-73 10-74 (79)
289 3ll7_A Putative methyltransfer 96.9 0.00029 9.8E-09 66.0 2.0 63 160-225 93-169 (410)
290 3lkd_A Type I restriction-modi 96.8 0.0016 5.3E-08 63.3 6.6 98 160-258 221-358 (542)
291 1wg8_A Predicted S-adenosylmet 96.7 0.0018 6.1E-08 57.4 5.6 65 147-215 10-77 (285)
292 2uyo_A Hypothetical protein ML 96.7 0.0033 1.1E-07 56.7 7.1 101 160-264 102-223 (310)
293 2heo_A Z-DNA binding protein 1 96.6 0.0013 4.5E-08 45.2 3.1 52 9-68 14-66 (67)
294 1y0u_A Arsenical resistance op 96.3 0.0042 1.4E-07 45.6 4.8 54 8-72 34-87 (96)
295 3cvo_A Methyltransferase-like 96.3 0.017 5.9E-07 48.6 8.7 92 160-263 30-158 (202)
296 3iei_A Leucine carboxyl methyl 96.3 0.025 8.6E-07 51.4 10.4 103 160-264 90-235 (334)
297 3p8z_A Mtase, non-structural p 96.2 0.01 3.5E-07 51.0 6.8 112 149-264 68-191 (267)
298 2px2_A Genome polyprotein [con 96.2 0.011 3.8E-07 51.4 7.0 105 149-256 63-181 (269)
299 1on2_A Transcriptional regulat 96.1 0.0051 1.7E-07 48.4 4.5 59 10-76 13-71 (142)
300 3b73_A PHIH1 repressor-like pr 96.1 0.0047 1.6E-07 46.9 3.8 65 7-77 15-79 (111)
301 1r7j_A Conserved hypothetical 96.0 0.01 3.5E-07 43.7 5.2 51 16-76 18-68 (95)
302 1qbj_A Protein (double-strande 95.9 0.0088 3E-07 42.7 4.3 60 9-74 14-76 (81)
303 3tka_A Ribosomal RNA small sub 95.9 0.018 6.1E-07 52.2 7.2 67 147-215 45-115 (347)
304 2oqg_A Possible transcriptiona 95.7 0.0077 2.6E-07 45.3 3.8 59 8-72 24-82 (114)
305 1oyi_A Double-stranded RNA-bin 95.7 0.01 3.6E-07 42.3 4.2 60 5-71 17-76 (82)
306 2wk1_A NOVP; transferase, O-me 95.7 0.015 5.2E-07 51.5 6.2 95 160-259 106-245 (282)
307 3cuo_A Uncharacterized HTH-typ 95.7 0.012 4.1E-07 42.9 4.7 59 8-71 27-85 (99)
308 3lkz_A Non-structural protein 95.7 0.025 8.7E-07 50.1 7.3 110 149-262 84-207 (321)
309 1qgp_A Protein (double strande 95.7 0.006 2.1E-07 43.1 2.7 55 9-69 18-75 (77)
310 3pqk_A Biofilm growth-associat 95.6 0.021 7.1E-07 42.2 5.7 56 8-69 26-81 (102)
311 3jth_A Transcription activator 95.6 0.017 5.7E-07 42.3 5.0 57 8-70 26-82 (98)
312 4fzv_A Putative methyltransfer 95.5 0.022 7.4E-07 52.3 6.6 110 153-264 142-290 (359)
313 1u2w_A CADC repressor, cadmium 95.4 0.011 3.7E-07 45.5 3.6 58 8-70 45-102 (122)
314 2htj_A P fimbrial regulatory p 95.3 0.019 6.4E-07 40.7 4.4 56 10-69 5-61 (81)
315 2x4h_A Hypothetical protein SS 95.3 0.03 1E-06 43.6 6.0 51 16-75 28-78 (139)
316 2pg4_A Uncharacterized protein 95.3 0.014 4.9E-07 42.5 3.8 57 16-76 26-84 (95)
317 3hrs_A Metalloregulator SCAR; 95.3 0.029 1E-06 47.5 6.2 62 7-76 8-69 (214)
318 2y75_A HTH-type transcriptiona 95.2 0.022 7.4E-07 44.1 4.8 47 17-69 24-70 (129)
319 1tbx_A ORF F-93, hypothetical 95.2 0.025 8.6E-07 41.4 4.9 63 9-76 12-78 (99)
320 1xn7_A Hypothetical protein YH 95.2 0.014 4.8E-07 41.3 3.2 46 7-56 4-49 (78)
321 2k02_A Ferrous iron transport 95.2 0.013 4.5E-07 42.4 3.0 47 7-57 4-50 (87)
322 1r1u_A CZRA, repressor protein 95.1 0.019 6.7E-07 42.8 4.1 58 7-70 28-85 (106)
323 2wte_A CSA3; antiviral protein 95.1 0.019 6.5E-07 49.8 4.6 60 10-76 157-216 (244)
324 3mq0_A Transcriptional repress 95.1 0.017 6E-07 50.9 4.3 47 17-71 43-89 (275)
325 2kko_A Possible transcriptiona 95.0 0.017 5.7E-07 43.4 3.5 58 7-70 27-84 (108)
326 1i4w_A Mitochondrial replicati 94.9 0.053 1.8E-06 49.6 7.2 54 161-215 59-116 (353)
327 1ub9_A Hypothetical protein PH 94.9 0.014 4.9E-07 42.5 2.8 64 8-75 19-84 (100)
328 3r4k_A Transcriptional regulat 94.9 0.019 6.3E-07 50.3 3.9 48 17-71 19-66 (260)
329 3lwf_A LIN1550 protein, putati 94.9 0.037 1.3E-06 44.7 5.3 47 17-69 42-88 (159)
330 3f6o_A Probable transcriptiona 94.8 0.02 6.7E-07 43.7 3.5 60 6-71 19-78 (118)
331 2h09_A Transcriptional regulat 94.8 0.03 1E-06 44.5 4.6 55 14-76 49-103 (155)
332 1ylf_A RRF2 family protein; st 94.8 0.024 8.2E-07 45.2 4.0 47 17-70 28-74 (149)
333 3f6v_A Possible transcriptiona 94.7 0.025 8.4E-07 45.3 4.0 61 6-72 59-119 (151)
334 1mkm_A ICLR transcriptional re 94.7 0.031 1.1E-06 48.4 4.8 46 18-71 22-67 (249)
335 2fsw_A PG_0823 protein; alpha- 94.6 0.033 1.1E-06 41.6 4.2 57 16-76 35-94 (107)
336 2jsc_A Transcriptional regulat 94.6 0.028 9.4E-07 42.9 3.8 58 7-70 23-80 (118)
337 2xrn_A HTH-type transcriptiona 94.5 0.035 1.2E-06 47.9 4.6 50 18-74 20-69 (241)
338 2o0y_A Transcriptional regulat 94.4 0.044 1.5E-06 47.8 5.2 47 17-71 36-82 (260)
339 2f2e_A PA1607; transcription f 94.4 0.041 1.4E-06 43.6 4.6 57 16-76 34-91 (146)
340 1xd7_A YWNA; structural genomi 94.4 0.051 1.8E-06 43.0 5.1 45 17-69 22-66 (145)
341 2qvo_A Uncharacterized protein 94.4 0.036 1.2E-06 40.4 3.9 52 20-76 31-82 (95)
342 3t8r_A Staphylococcus aureus C 94.4 0.04 1.4E-06 43.6 4.4 46 18-69 27-72 (143)
343 3bdd_A Regulatory protein MARR 94.4 0.07 2.4E-06 41.1 5.8 64 10-77 36-102 (142)
344 3hsr_A HTH-type transcriptiona 94.3 0.045 1.5E-06 42.5 4.6 61 12-76 43-105 (140)
345 3kp7_A Transcriptional regulat 94.3 0.038 1.3E-06 43.4 4.3 62 10-76 43-108 (151)
346 2obp_A Putative DNA-binding pr 94.3 0.077 2.6E-06 39.0 5.5 57 16-76 33-89 (96)
347 3cdh_A Transcriptional regulat 94.3 0.074 2.5E-06 41.9 5.9 63 10-76 48-112 (155)
348 3k0l_A Repressor protein; heli 94.2 0.076 2.6E-06 42.3 5.9 59 14-76 55-115 (162)
349 3bja_A Transcriptional regulat 94.2 0.047 1.6E-06 42.0 4.5 59 14-76 42-102 (139)
350 1sfx_A Conserved hypothetical 94.2 0.033 1.1E-06 40.9 3.4 45 9-57 24-68 (109)
351 3ech_A MEXR, multidrug resista 94.2 0.045 1.5E-06 42.6 4.4 62 11-76 43-106 (142)
352 4a5n_A Uncharacterized HTH-typ 94.2 0.079 2.7E-06 41.3 5.7 58 16-76 36-95 (131)
353 2g7u_A Transcriptional regulat 94.1 0.072 2.4E-06 46.3 5.9 51 17-76 27-77 (257)
354 3bj6_A Transcriptional regulat 94.1 0.049 1.7E-06 42.7 4.5 59 14-76 49-109 (152)
355 3bpv_A Transcriptional regulat 94.1 0.049 1.7E-06 41.9 4.3 59 14-76 38-98 (138)
356 2gxg_A 146AA long hypothetical 94.0 0.094 3.2E-06 40.6 6.0 62 10-76 42-105 (146)
357 3g3z_A NMB1585, transcriptiona 94.0 0.054 1.8E-06 42.2 4.5 59 14-76 40-100 (145)
358 2vz8_A Fatty acid synthase; tr 93.9 0.022 7.5E-07 64.7 2.7 97 161-260 1241-1350(2512)
359 3k69_A Putative transcription 93.9 0.078 2.7E-06 42.9 5.3 48 17-70 26-73 (162)
360 2fbh_A Transcriptional regulat 93.9 0.11 3.6E-06 40.3 6.0 58 15-76 48-107 (146)
361 3nrv_A Putative transcriptiona 93.9 0.057 1.9E-06 42.2 4.4 61 12-76 47-109 (148)
362 2hzt_A Putative HTH-type trans 93.9 0.12 4E-06 38.5 5.9 57 16-75 24-82 (107)
363 3oop_A LIN2960 protein; protei 93.9 0.049 1.7E-06 42.3 3.9 57 16-76 48-106 (143)
364 2a61_A Transcriptional regulat 93.8 0.056 1.9E-06 42.0 4.2 57 16-76 44-102 (145)
365 1jgs_A Multiple antibiotic res 93.8 0.059 2E-06 41.4 4.3 57 16-76 45-103 (138)
366 3r24_A NSP16, 2'-O-methyl tran 93.8 0.057 1.9E-06 47.9 4.5 92 158-257 107-216 (344)
367 2pex_A Transcriptional regulat 93.8 0.062 2.1E-06 42.2 4.5 62 12-77 54-117 (153)
368 1yyv_A Putative transcriptiona 93.8 0.048 1.6E-06 42.5 3.7 57 16-76 45-104 (131)
369 3df8_A Possible HXLR family tr 93.8 0.11 3.6E-06 39.2 5.5 56 16-76 37-94 (111)
370 2nnn_A Probable transcriptiona 93.8 0.057 1.9E-06 41.6 4.1 62 11-76 44-107 (140)
371 2qww_A Transcriptional regulat 93.7 0.069 2.4E-06 42.0 4.6 59 14-76 50-112 (154)
372 3tgn_A ADC operon repressor AD 93.7 0.099 3.4E-06 40.6 5.5 62 10-76 43-106 (146)
373 2hr3_A Probable transcriptiona 93.7 0.077 2.6E-06 41.3 4.8 56 17-76 48-105 (147)
374 2ia2_A Putative transcriptiona 93.6 0.064 2.2E-06 46.9 4.6 46 17-71 34-79 (265)
375 2bv6_A MGRA, HTH-type transcri 93.5 0.07 2.4E-06 41.3 4.3 61 12-76 44-106 (142)
376 3s2w_A Transcriptional regulat 93.5 0.073 2.5E-06 42.2 4.5 59 14-76 59-119 (159)
377 2fa5_A Transcriptional regulat 93.5 0.074 2.5E-06 42.2 4.4 59 14-76 58-118 (162)
378 1lj9_A Transcriptional regulat 93.4 0.077 2.6E-06 41.1 4.3 62 11-76 35-98 (144)
379 1r1t_A Transcriptional repress 93.4 0.12 4.1E-06 39.6 5.3 57 8-70 49-105 (122)
380 2fu4_A Ferric uptake regulatio 93.3 0.087 3E-06 37.1 4.1 53 5-57 17-72 (83)
381 2zkz_A Transcriptional repress 93.2 0.041 1.4E-06 40.5 2.3 60 6-71 28-87 (99)
382 1bja_A Transcription regulator 93.2 0.11 3.8E-06 38.0 4.6 53 16-77 27-80 (95)
383 3cjn_A Transcriptional regulat 93.2 0.078 2.7E-06 42.1 4.2 61 12-76 59-121 (162)
384 2zig_A TTHA0409, putative modi 93.2 0.065 2.2E-06 47.6 4.0 50 148-202 225-275 (297)
385 3bro_A Transcriptional regulat 93.2 0.12 4E-06 39.8 5.0 54 19-76 50-105 (141)
386 2jt1_A PEFI protein; solution 93.1 0.084 2.9E-06 37.1 3.7 36 18-57 23-58 (77)
387 3eco_A MEPR; mutlidrug efflux 93.1 0.094 3.2E-06 40.4 4.4 55 18-76 46-102 (139)
388 1s3j_A YUSO protein; structura 93.0 0.059 2E-06 42.4 3.2 57 16-76 48-106 (155)
389 3u1d_A Uncharacterized protein 92.9 0.13 4.5E-06 41.0 5.0 86 6-107 30-125 (151)
390 2rdp_A Putative transcriptiona 92.9 0.1 3.4E-06 40.7 4.4 57 16-76 53-111 (150)
391 2zwa_A Leucine carboxyl methyl 92.9 0.15 5.2E-06 50.8 6.6 103 160-265 107-261 (695)
392 4hbl_A Transcriptional regulat 92.9 0.065 2.2E-06 42.1 3.2 59 14-76 50-110 (149)
393 3boq_A Transcriptional regulat 92.9 0.088 3E-06 41.6 4.0 57 16-76 59-117 (160)
394 3f3x_A Transcriptional regulat 92.8 0.081 2.8E-06 41.1 3.6 58 14-76 46-105 (144)
395 2eth_A Transcriptional regulat 92.7 0.12 4.2E-06 40.6 4.7 61 12-76 51-113 (154)
396 2fbi_A Probable transcriptiona 92.7 0.07 2.4E-06 41.1 3.1 59 14-76 45-105 (142)
397 3e6m_A MARR family transcripti 92.6 0.079 2.7E-06 42.2 3.4 57 16-76 64-122 (161)
398 2nyx_A Probable transcriptiona 92.6 0.082 2.8E-06 42.5 3.6 57 16-76 56-114 (168)
399 2frh_A SARA, staphylococcal ac 92.6 0.066 2.3E-06 41.1 2.8 55 18-76 52-108 (127)
400 3fm5_A Transcriptional regulat 92.5 0.11 3.9E-06 40.6 4.2 56 17-76 52-109 (150)
401 3deu_A Transcriptional regulat 92.5 0.13 4.4E-06 41.3 4.5 56 17-76 66-123 (166)
402 3ufb_A Type I restriction-modi 91.9 0.47 1.6E-05 45.7 8.5 110 148-259 206-363 (530)
403 1p6r_A Penicillinase repressor 91.9 0.099 3.4E-06 36.8 2.8 48 6-57 10-61 (82)
404 2d1h_A ST1889, 109AA long hypo 91.9 0.12 4.1E-06 37.8 3.4 37 17-57 34-70 (109)
405 1z91_A Organic hydroperoxide r 91.6 0.076 2.6E-06 41.3 2.2 58 16-77 51-110 (147)
406 3jw4_A Transcriptional regulat 91.6 0.13 4.5E-06 40.1 3.6 55 18-76 56-112 (148)
407 3u2r_A Regulatory protein MARR 91.6 0.15 5.1E-06 40.8 4.0 57 17-77 60-118 (168)
408 1ku9_A Hypothetical protein MJ 91.6 0.2 6.9E-06 38.8 4.6 50 16-69 38-87 (152)
409 3nqo_A MARR-family transcripti 91.4 0.17 5.7E-06 41.6 4.1 57 17-77 55-113 (189)
410 2fxa_A Protease production reg 91.1 0.12 4.1E-06 43.3 3.0 57 16-76 59-117 (207)
411 4b8x_A SCO5413, possible MARR- 91.0 0.15 5.1E-06 40.1 3.3 56 17-76 49-106 (147)
412 2k4b_A Transcriptional regulat 90.9 0.1 3.6E-06 38.5 2.1 50 8-57 38-87 (99)
413 1okr_A MECI, methicillin resis 90.9 0.083 2.8E-06 40.0 1.6 63 10-76 15-81 (123)
414 4aik_A Transcriptional regulat 90.9 0.47 1.6E-05 37.4 6.2 56 17-76 44-101 (151)
415 1q1h_A TFE, transcription fact 90.9 0.11 3.8E-06 38.7 2.3 45 8-56 21-66 (110)
416 3r0a_A Putative transcriptiona 90.8 0.16 5.5E-06 38.8 3.2 44 10-57 31-76 (123)
417 4fx0_A Probable transcriptiona 90.7 0.18 6.1E-06 39.8 3.5 55 18-76 51-106 (148)
418 2lkp_A Transcriptional regulat 90.6 0.19 6.5E-06 37.9 3.4 45 8-57 35-79 (119)
419 1z7u_A Hypothetical protein EF 90.3 0.28 9.4E-06 36.7 4.1 57 17-76 33-91 (112)
420 2pn6_A ST1022, 150AA long hypo 90.1 0.31 1.1E-05 38.3 4.4 46 7-56 5-50 (150)
421 2cfx_A HTH-type transcriptiona 90.0 0.32 1.1E-05 38.1 4.4 46 8-57 8-53 (144)
422 3i71_A Ethanolamine utilizatio 90.0 0.86 2.9E-05 29.7 5.5 44 17-69 16-59 (68)
423 2vn2_A DNAD, chromosome replic 89.9 0.29 9.8E-06 37.8 4.0 35 19-57 51-85 (128)
424 2p8t_A Hypothetical protein PH 89.7 0.48 1.6E-05 39.5 5.4 50 17-75 28-77 (200)
425 2w25_A Probable transcriptiona 89.3 0.31 1E-05 38.4 3.8 45 9-57 11-55 (150)
426 4g6q_A Putative uncharacterize 89.2 1.9 6.4E-05 35.2 8.7 64 6-74 24-92 (182)
427 3fwz_A Inner membrane protein 89.1 1.5 5E-05 33.8 7.7 88 161-256 7-103 (140)
428 3iht_A S-adenosyl-L-methionine 89.1 0.59 2E-05 37.3 5.2 120 132-260 15-149 (174)
429 3hhh_A Transcriptional regulat 88.8 0.32 1.1E-05 36.8 3.5 76 1-76 4-89 (116)
430 3mag_A VP39; methylated adenin 88.5 1.2 4.3E-05 39.2 7.4 80 160-263 60-143 (307)
431 2p5v_A Transcriptional regulat 88.4 0.47 1.6E-05 37.9 4.4 46 8-57 13-58 (162)
432 2qq9_A Diphtheria toxin repres 88.2 0.57 1.9E-05 39.7 5.0 50 19-76 24-73 (226)
433 1fx7_A Iron-dependent represso 87.9 0.48 1.6E-05 40.3 4.3 50 19-76 22-73 (230)
434 3i4p_A Transcriptional regulat 87.6 0.54 1.8E-05 37.6 4.3 45 8-56 6-50 (162)
435 2cg4_A Regulatory protein ASNC 87.3 0.46 1.6E-05 37.4 3.7 45 8-56 11-55 (152)
436 3cta_A Riboflavin kinase; stru 87.2 0.47 1.6E-05 40.3 3.9 56 17-77 25-80 (230)
437 2cyy_A Putative HTH-type trans 87.1 0.36 1.2E-05 38.0 2.9 45 8-56 10-54 (151)
438 2oo3_A Protein involved in cat 87.0 0.67 2.3E-05 40.8 4.8 99 161-264 92-204 (283)
439 1sfu_A 34L protein; protein/Z- 87.0 0.68 2.3E-05 32.2 3.8 56 8-69 18-73 (75)
440 2dbb_A Putative HTH-type trans 86.9 0.41 1.4E-05 37.7 3.1 46 8-57 12-57 (151)
441 2e1c_A Putative HTH-type trans 86.9 0.45 1.5E-05 38.6 3.4 45 8-56 30-74 (171)
442 2v79_A DNA replication protein 86.9 0.39 1.3E-05 37.5 2.9 35 18-56 50-84 (135)
443 2p4w_A Transcriptional regulat 86.9 0.5 1.7E-05 39.5 3.8 60 7-71 17-80 (202)
444 2ia0_A Putative HTH-type trans 86.6 0.55 1.9E-05 38.0 3.8 44 9-56 21-64 (171)
445 1zkd_A DUF185; NESG, RPR58, st 86.0 2.6 8.9E-05 38.8 8.4 74 130-209 55-140 (387)
446 1uly_A Hypothetical protein PH 85.9 0.9 3.1E-05 37.6 4.8 43 9-56 24-66 (192)
447 2fbk_A Transcriptional regulat 85.8 0.29 1E-05 39.6 1.8 53 20-76 87-141 (181)
448 2qlz_A Transcription factor PF 85.8 0.27 9.3E-06 42.1 1.6 61 7-72 14-79 (232)
449 1i1g_A Transcriptional regulat 85.7 0.44 1.5E-05 36.8 2.7 45 9-57 8-52 (141)
450 2g9w_A Conserved hypothetical 85.6 0.71 2.4E-05 35.7 3.9 47 7-57 11-62 (138)
451 1bia_A BIRA bifunctional prote 85.6 1.2 4.2E-05 39.8 5.9 58 5-69 5-62 (321)
452 2fe3_A Peroxide operon regulat 85.3 1.3 4.6E-05 34.6 5.4 64 5-68 22-87 (145)
453 3ggo_A Prephenate dehydrogenas 85.2 2.4 8.1E-05 37.7 7.6 89 162-256 34-126 (314)
454 2pjp_A Selenocysteine-specific 85.1 0.82 2.8E-05 34.7 3.9 48 16-71 17-64 (121)
455 2lnb_A Z-DNA-binding protein 1 84.5 1.1 3.7E-05 31.2 3.8 51 10-68 24-75 (80)
456 2qlz_A Transcription factor PF 84.3 0.63 2.1E-05 39.8 3.2 47 15-69 174-220 (232)
457 2g1u_A Hypothetical protein TM 84.3 11 0.00037 29.2 10.4 90 160-256 18-116 (155)
458 1cf7_A Protein (transcription 84.2 0.85 2.9E-05 31.8 3.3 37 17-57 28-65 (76)
459 2esh_A Conserved hypothetical 84.0 0.79 2.7E-05 34.6 3.4 61 16-76 23-91 (118)
460 2py6_A Methyltransferase FKBM; 84.0 1.3 4.5E-05 41.0 5.5 38 159-197 225-265 (409)
461 1v4r_A Transcriptional repress 83.9 1 3.4E-05 32.9 3.8 36 18-57 33-69 (102)
462 3g7u_A Cytosine-specific methy 83.9 2.5 8.5E-05 38.7 7.3 98 162-263 3-123 (376)
463 1g60_A Adenine-specific methyl 83.7 0.92 3.2E-05 39.2 4.1 49 148-201 202-251 (260)
464 1sd4_A Penicillinase repressor 83.3 0.55 1.9E-05 35.4 2.2 46 8-57 13-62 (126)
465 2b0l_A GTP-sensing transcripti 83.0 1 3.6E-05 33.1 3.6 37 17-57 40-77 (102)
466 1j5y_A Transcriptional regulat 82.8 1.4 4.8E-05 36.0 4.7 54 8-70 24-79 (187)
467 1z6r_A MLC protein; transcript 82.2 0.92 3.1E-05 41.8 3.7 45 9-57 20-64 (406)
468 1mzb_A Ferric uptake regulatio 82.0 1.8 6.1E-05 33.4 4.8 64 5-68 18-84 (136)
469 3k2z_A LEXA repressor; winged 81.8 0.91 3.1E-05 37.4 3.2 36 18-57 23-58 (196)
470 3mwm_A ZUR, putative metal upt 81.5 1.4 4.8E-05 34.3 4.0 64 5-68 14-79 (139)
471 2o03_A Probable zinc uptake re 81.3 1.7 5.9E-05 33.3 4.5 62 6-67 12-75 (131)
472 3b1f_A Putative prephenate deh 80.7 5 0.00017 34.7 7.8 88 162-255 7-98 (290)
473 3elk_A Putative transcriptiona 80.6 0.82 2.8E-05 34.6 2.3 61 16-76 24-90 (117)
474 2hoe_A N-acetylglucosamine kin 80.6 1.1 3.7E-05 41.0 3.5 59 9-72 24-87 (380)
475 3l9w_A Glutathione-regulated p 80.5 4.4 0.00015 37.6 7.7 88 162-257 5-101 (413)
476 1hsj_A Fusion protein consisti 80.5 1.2 4.2E-05 41.8 3.9 55 18-76 419-475 (487)
477 2dk5_A DNA-directed RNA polyme 80.4 1.3 4.5E-05 31.9 3.2 37 17-57 34-70 (91)
478 3c85_A Putative glutathione-re 80.2 9.1 0.00031 30.4 8.8 90 161-257 39-138 (183)
479 1g55_A DNA cytosine methyltran 80.1 1.9 6.5E-05 38.9 5.0 99 162-262 3-122 (343)
480 3eyy_A Putative iron uptake re 79.6 1.5 5E-05 34.4 3.6 65 4-68 18-83 (145)
481 3l4b_C TRKA K+ channel protien 79.4 7 0.00024 32.2 8.0 86 163-256 2-97 (218)
482 3l7w_A Putative uncharacterize 78.9 1.7 5.7E-05 32.2 3.5 61 16-76 19-82 (108)
483 1p4x_A Staphylococcal accessor 78.9 1.4 4.9E-05 37.9 3.6 54 19-76 174-229 (250)
484 2o0m_A Transcriptional regulat 78.3 0.43 1.5E-05 43.3 0.0 57 12-77 27-83 (345)
485 2aef_A Calcium-gated potassium 77.9 14 0.00046 30.8 9.5 88 161-257 9-104 (234)
486 4esb_A Transcriptional regulat 77.8 1.7 5.9E-05 32.6 3.3 61 16-76 19-85 (115)
487 1p4x_A Staphylococcal accessor 77.7 1.9 6.4E-05 37.2 3.9 55 18-76 49-105 (250)
488 1vpt_A VP39; RNA CAP, poly(A) 77.6 6 0.0002 35.3 7.1 49 161-210 76-128 (348)
489 2w57_A Ferric uptake regulatio 77.4 2.5 8.7E-05 33.2 4.4 64 5-68 17-83 (150)
490 3tqn_A Transcriptional regulat 76.6 3.4 0.00012 30.7 4.7 36 18-57 31-67 (113)
491 3tos_A CALS11; methyltransfera 75.9 2.9 9.9E-05 36.2 4.6 97 160-261 69-220 (257)
492 3vyw_A MNMC2; tRNA wobble urid 75.9 1.2 4E-05 39.8 2.1 93 161-257 97-225 (308)
493 2ek5_A Predicted transcription 75.7 4.6 0.00016 30.8 5.3 36 18-57 26-62 (129)
494 3lmm_A Uncharacterized protein 75.2 2.4 8.1E-05 41.3 4.3 58 10-76 435-497 (583)
495 1xma_A Predicted transcription 75.2 1.3 4.3E-05 34.9 2.0 61 16-76 51-119 (145)
496 1z05_A Transcriptional regulat 74.6 1.8 6.3E-05 40.1 3.3 44 10-57 44-87 (429)
497 2xig_A Ferric uptake regulatio 74.5 3.8 0.00013 32.2 4.7 62 7-68 29-92 (150)
498 3neu_A LIN1836 protein; struct 73.7 3.7 0.00013 31.1 4.3 36 18-57 35-71 (125)
499 3dv8_A Transcriptional regulat 73.7 3.9 0.00013 33.3 4.8 42 19-69 169-210 (220)
500 3eqx_A FIC domain containing t 73.6 2 6.9E-05 39.3 3.2 64 11-79 303-366 (373)
No 1
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=100.00 E-value=3.5e-47 Score=354.64 Aligned_cols=278 Identities=19% Similarity=0.270 Sum_probs=243.1
Q ss_pred chhhhhhhhhhcC-CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhcCCCCCC
Q 021707 4 NECRDGRKKVRLA-NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVTDAEGLS 82 (309)
Q Consensus 4 ~~~~~g~~~~~l~-~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~~~~~~~ 82 (309)
+.|++|+|+.+.. .+|+|++|||+++ |++++.++||||+|++.|++++..++ +++.|++|+.++.++...+|.+
T Consensus 27 aa~eLglfd~L~~~~~p~t~~eLA~~~----g~~~~~l~rlLr~L~~~gll~~~~~~-~~~~y~~t~~s~~~l~~~~~~~ 101 (353)
T 4a6d_A 27 AACELGVFDLLAEAPGPLDVAAVAAGV----RASAHGTELLLDICVSLKLLKVETRG-GKAFYRNTELSSDYLTTVSPTS 101 (353)
T ss_dssp HHHHHTHHHHHHHSSSCBCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEEET-TEEEEEECHHHHHHHSTTSTTC
T ss_pred HHHHcCHHHHHhcCCCCCCHHHHHHhh----CcCHHHHHHHHHHHHHCCCEEEeccC-ccceeeCCHHHHHHhhcCCchH
Confidence 4688999998754 4799999999999 99999999999999999999865421 1458999999987776667889
Q ss_pred hHHHHHHhcchhhhhhhhhHHHHhcCCCCChhhhhhCC---ChhhhhhcCchHHHHHHHHhhcCCcccHHHHHhhcCCCC
Q 021707 83 YAPYVLQHHQDAFMSAWPLVHEAVLDPTIEPFVKVHGE---PAYSYYGKMPEMNGLMRRAISGVSVPFMTSVLDSYNGFK 159 (309)
Q Consensus 83 ~~~~i~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~ 159 (309)
+++++.+.. +..++.|.+|++++++++ ++|...+|. ++|+++.++|+....|.++|...+....+.+++.++ |+
T Consensus 102 ~~~~~~~~~-~~~~~~~~~L~~~vr~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~aM~~~~~~~~~~~~~~~~-~~ 178 (353)
T 4a6d_A 102 QCSMLKYMG-RTSYRCWGHLADAVREGR-NQYLETFGVPAEELFTAIYRSEGERLQFMQALQEVWSVNGRSVLTAFD-LS 178 (353)
T ss_dssp CHHHHHHHH-HTHHHHHTTHHHHHHHTS-CCHHHHHSCCCSSHHHHHTSSHHHHHHHHHHHHTTHHHHHHHHHHSSC-GG
T ss_pred HHHHHHHhC-HHHHHHHHHHHHHHhcCC-ChhHHhcCCChHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhcC-cc
Confidence 999887754 456789999999999998 788888874 578888899999999999999988877888999997 99
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCC------CCCceEEeCCCCCC-CCCCceeeehhhhhcC
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPS------IPGVTHIGGDMFNS-IPAANAIFMKWVLATW 232 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~------~~ri~~~~~d~~~~-~p~~D~i~~~~vlh~~ 232 (309)
...+|||||||+|.++.+++++||+++ ++++|+|++++.+++ .+||+++++|+|++ .|.+|+|+++++||+|
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~-~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~~~D~~~~~~vlh~~ 257 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCK-ITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILARVLHDW 257 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCE-EEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTSCCCCCSEEEEESSGGGS
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCce-eEeccCHHHHHHHHHhhhhcccCceeeecCccccCCCCCceEEEeeeecccC
Confidence 999999999999999999999999999 999999999987754 38999999999987 5567999999999999
Q ss_pred ChhHHHHHHHHHHHhcCCCcEEEEeccccCCCCCchhhhhhhhcccHhhhcccccCCccccee
Q 021707 233 TDDECKLIMENCYKALLAGGKLIACEPVLLDDSNESQRTRALLEGDIFVMTIYRAKDDNSFYF 295 (309)
Q Consensus 233 ~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~~~~~~~~~~~~~~dl~ml~~~~~~g~~rt~~ 295 (309)
+|++++++|++++++|+|||+++|+|.++++++..+ .....+|++||+ ..+|++||..
T Consensus 258 ~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~---~~~~~~dl~ml~--~~~g~ert~~ 315 (353)
T 4a6d_A 258 ADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGP---LLTQLYSLNMLV--QTEGQERTPT 315 (353)
T ss_dssp CHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCC---HHHHHHHHHHHH--SSSCCCCCHH
T ss_pred CHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCC---HHHHHHHHHHHH--hCCCcCCCHH
Confidence 999999999999999999999999999999876522 245789999999 5789999853
No 2
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=100.00 E-value=1.5e-45 Score=345.06 Aligned_cols=284 Identities=32% Similarity=0.623 Sum_probs=249.4
Q ss_pred chhhhhhhhhhcCC--CCCCHHHHHHHhCcCCCC--Ccc---hHHHHHHHHHcCCceeeeccc--cc--CceEEcChhch
Q 021707 4 NECRDGRKKVRLAN--TPLSVSQILTCILPSGGG--DAE---NLQCILRLLTSYGVFSEHREF--RG--ERKYSLTEIGK 72 (309)
Q Consensus 4 ~~~~~g~~~~~l~~--~~~t~~eLA~~~~~~~g~--~~~---~l~rlL~~L~~~gll~~~~~~--~~--~~~y~~t~~~~ 72 (309)
+.|++|+|+.+... +|+|++|||+++ |+ +++ .|+||||+|++.|+|++.... .+ ++.|++|+.++
T Consensus 39 ~a~~Lgifd~L~~~g~~~~t~~eLA~~~----g~~~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~g~~~~~y~~t~~s~ 114 (364)
T 3p9c_A 39 NAIELGLLEILVAAGGKSLTPTEVAAKL----PSAANPEAPDMVDRILRLLASYNVVTCLVEEGKDGRLSRSYGAAPVCK 114 (364)
T ss_dssp HHHHHTHHHHHHHTTTCCBCHHHHHHTT----TCTTCTTHHHHHHHHHHHHHHTTSEEEEEEECSSSCEEEEEEECGGGG
T ss_pred HHHHCChHHHHhhcCCCCCCHHHHHHhc----CCCCCccchhhHHHHHHHHHhCCCEEEeccccCCCCcCCEEecCHHHH
Confidence 46899999988653 699999999999 98 887 999999999999999986310 00 36899999999
Q ss_pred hhhcCCCCCChHHHHHHhcchhhhhhhhhHHHHhcCCCCChhhhhhCCChhhhhhcCchHHHHHHHHhhcCCcccHHHHH
Q 021707 73 SLVTDAEGLSYAPYVLQHHQDAFMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKMPEMNGLMRRAISGVSVPFMTSVL 152 (309)
Q Consensus 73 ~l~~~~~~~~~~~~i~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~ 152 (309)
.|+.+.++.++++++.+..++.++..|.+|++++++|. ++|+..+|.++|+|+.++|+..+.|.++|...+....+.++
T Consensus 115 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~r~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~ 193 (364)
T 3p9c_A 115 FLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGG-IPFNKAYGMSAFEYHGTDPRFNRVFNEGMKNHSIIITKKLL 193 (364)
T ss_dssp GSSCCTTSCCTHHHHHHHTSHHHHGGGGGHHHHHHHCS-CHHHHHHSSCHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCCCCCHHHHHHHhcCHHHHHHHhCHHHHHhhCC-ChHHHhcCCCHHHHHHhCHHHHHHHHHHHHHhhHHHHHHHH
Confidence 99887667899998887767778899999999999988 89999999999999999999999999999988777777888
Q ss_pred hhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCCCCCceEEeCCCCCCCCCCceeeehhhhhcC
Q 021707 153 DSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPSIPGVTHIGGDMFNSIPAANAIFMKWVLATW 232 (309)
Q Consensus 153 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~~~ri~~~~~d~~~~~p~~D~i~~~~vlh~~ 232 (309)
+.++.+++..+|||||||+|.++..+++++|+++ ++++|+|.+++.+++.+||+++.+|+++++|.+|+|+++++||+|
T Consensus 194 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~v~~~~~D~~~~~p~~D~v~~~~vlh~~ 272 (364)
T 3p9c_A 194 ELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIK-GVNFDLPHVISEAPQFPGVTHVGGDMFKEVPSGDTILMKWILHDW 272 (364)
T ss_dssp HHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCE-EEEEECHHHHTTCCCCTTEEEEECCTTTCCCCCSEEEEESCGGGS
T ss_pred HhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCe-EEEecCHHHHHhhhhcCCeEEEeCCcCCCCCCCCEEEehHHhccC
Confidence 8885477789999999999999999999999999 999999999999998899999999999988877999999999999
Q ss_pred ChhHHHHHHHHHHHhcCCCcEEEEeccccCCCCCchhhhhhhhcccHhhhcccccCCcccce
Q 021707 233 TDDECKLIMENCYKALLAGGKLIACEPVLLDDSNESQRTRALLEGDIFVMTIYRAKDDNSFY 294 (309)
Q Consensus 233 ~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~~~~~~~~~~~~~~dl~ml~~~~~~g~~rt~ 294 (309)
+++++.++|++++++|+|||+|+|.|.+.++.+...........+|+.|++ .+.+|++||.
T Consensus 273 ~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~-~~~~g~~rt~ 333 (364)
T 3p9c_A 273 SDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLA-HNPGGRERYE 333 (364)
T ss_dssp CHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHH-HCSSCCCCBH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHh-cccCCccCCH
Confidence 999999999999999999999999999998865432223344679999996 2578999985
No 3
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=100.00 E-value=2.6e-44 Score=336.99 Aligned_cols=284 Identities=32% Similarity=0.596 Sum_probs=247.0
Q ss_pred chhhhhhhhhhcCC----CCCCHHHHHHHhCcCCC-CCcc---hHHHHHHHHHcCCceeeecc----cccCceEEcChhc
Q 021707 4 NECRDGRKKVRLAN----TPLSVSQILTCILPSGG-GDAE---NLQCILRLLTSYGVFSEHRE----FRGERKYSLTEIG 71 (309)
Q Consensus 4 ~~~~~g~~~~~l~~----~~~t~~eLA~~~~~~~g-~~~~---~l~rlL~~L~~~gll~~~~~----~~~~~~y~~t~~~ 71 (309)
+.+++|+|+.+... +|+|++|||+++ | .+++ .|+||||+|++.|+|++... +..++.|++|+.+
T Consensus 40 ~a~~Lglfd~L~~~~gp~~~~t~~eLA~~~----~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~g~~~~~y~~t~~s 115 (368)
T 3reo_A 40 AAIELDVLEIMAKSVPPSGYISPAEIAAQL----PTTNPEAPVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVC 115 (368)
T ss_dssp HHHHTTHHHHHHHHCCTTCCBCHHHHHTTS----SCCCTTHHHHHHHHHHHHHHTTSEEEEEEECTTSCEEEEEEECTTH
T ss_pred HHHHCCchhHHhhcCCCCCCcCHHHHHHhc----CcCCCcchhhHHHHHHHHHhCCCeEEecccCCCCcccceeCcCHHH
Confidence 46889999988652 369999999999 8 3554 99999999999999998620 0002689999999
Q ss_pred hhhhcCCCCCChHHHHHHhcchhhhhhhhhHHHHhcCCCCChhhhhhCCChhhhhhcCchHHHHHHHHhhcCCcccHHHH
Q 021707 72 KSLVTDAEGLSYAPYVLQHHQDAFMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKMPEMNGLMRRAISGVSVPFMTSV 151 (309)
Q Consensus 72 ~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~ 151 (309)
+.|+.+.++.++++++.+..++.++..|.+|++++++|. ++|+..+|.++|+|+.++|+..+.|.++|...+....+.+
T Consensus 116 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~ 194 (368)
T 3reo_A 116 KFLTKNEDGVSLAPFLLLATDKVLLEPWFYLKDAILEGG-IPFNKAYGMNIFDYHGTDHRINKVFNKGMSSNSTITMKKI 194 (368)
T ss_dssp HHHSCCTTSCCSHHHHHHHTCHHHHGGGGGHHHHHHHCS-CHHHHHSSSCHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCHHHHHHHhcCHHHHhhhhchHHHHhcCC-CHHHHHhCCCHHHHHhhCHHHHHHHHHHHHhhhhhHHHHH
Confidence 999887667899998887767778899999999999988 7999999999999999999999999999998877777788
Q ss_pred HhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCCCCCceEEeCCCCCCCCCCceeeehhhhhc
Q 021707 152 LDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPSIPGVTHIGGDMFNSIPAANAIFMKWVLAT 231 (309)
Q Consensus 152 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~~~ri~~~~~d~~~~~p~~D~i~~~~vlh~ 231 (309)
++.++.+++..+|||||||+|.++..+++++|+++ ++++|+|.+++.+++.++|+++.+|+++++|.+|+|++++++|+
T Consensus 195 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~p~~D~v~~~~vlh~ 273 (368)
T 3reo_A 195 LEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSIN-AINFDLPHVIQDAPAFSGVEHLGGDMFDGVPKGDAIFIKWICHD 273 (368)
T ss_dssp HTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCE-EEEEECHHHHTTCCCCTTEEEEECCTTTCCCCCSEEEEESCGGG
T ss_pred HHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCE-EEEEehHHHHHhhhhcCCCEEEecCCCCCCCCCCEEEEechhhc
Confidence 88885477789999999999999999999999999 99999999999999889999999999988887799999999999
Q ss_pred CChhHHHHHHHHHHHhcCCCcEEEEeccccCCCCCchhhhhhhhcccHhhhcccccCCcccce
Q 021707 232 WTDDECKLIMENCYKALLAGGKLIACEPVLLDDSNESQRTRALLEGDIFVMTIYRAKDDNSFY 294 (309)
Q Consensus 232 ~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~~~~~~~~~~~~~~dl~ml~~~~~~g~~rt~ 294 (309)
|+++++.++|++++++|+|||+|+|.|.+.++.+...........+|+.|+. .+.+|++||.
T Consensus 274 ~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~g~~rt~ 335 (368)
T 3reo_A 274 WSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLA-YNPGGKERTE 335 (368)
T ss_dssp BCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHH-HSSBCCCCCH
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHh-hcCCCccCCH
Confidence 9999999999999999999999999999998865432233345689999997 2458999875
No 4
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=100.00 E-value=1.3e-42 Score=323.07 Aligned_cols=271 Identities=21% Similarity=0.358 Sum_probs=240.8
Q ss_pred chhhhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhcCCCCCCh
Q 021707 4 NECRDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVTDAEGLSY 83 (309)
Q Consensus 4 ~~~~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~~~~~~~~ 83 (309)
+.|++|+|+.+ .++|+|++|||+++ |++++.++||||+|++.|++++ + ++.|++|+.++.|+.+ +|.++
T Consensus 41 ~a~~lglf~~l-~~g~~t~~elA~~~----g~~~~~l~rlLr~l~~~g~l~~-~----~~~y~~t~~s~~l~~~-~~~~~ 109 (348)
T 3lst_A 41 AAAAVGVADHL-VDGPRTPAELAAAT----GTDADALRRVLRLLAVRDVVRE-S----DGRFALTDKGAALRSD-SPVPA 109 (348)
T ss_dssp HHHHHTGGGGG-TTSCBCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEE-E----TTEEEECTTTGGGSTT-SSSCS
T ss_pred HHHHcCchhHh-hCCCCCHHHHHHHh----CcCHHHHHHHHHHHHhCCCEEe-c----CCEEecCHHHHHHhcC-CCccH
Confidence 46889999976 56899999999999 9999999999999999999999 4 6899999999988665 57789
Q ss_pred HHHHHHhcchhhhhhhhhHHHHhcCCCCChhhhhhCCChhhhhhcCchHHHHHHHHhhcCCcccHHHHHhhcCCCCCcce
Q 021707 84 APYVLQHHQDAFMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKMPEMNGLMRRAISGVSVPFMTSVLDSYNGFKGVKR 163 (309)
Q Consensus 84 ~~~i~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~ 163 (309)
++++.++..+..++.|.+|++++++|. ++|+..+|.++|+|+.++|+..+.|.++|...+....+.+++.++ +++..+
T Consensus 110 ~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~-~~~~~~ 187 (348)
T 3lst_A 110 RAGILMFTDTMFWTMSHRVASALGPER-PAFADIFGSSLDAYFDGDAEVEALYYEGMETVSAAEHLILARAGD-FPATGT 187 (348)
T ss_dssp HHHHHHHTSHHHHHHHHTHHHHTCTTC-CCHHHHHSSCHHHHHTTCHHHHHHHHHHHHHHHHTTHHHHHHHSC-CCSSEE
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHhcCC-ChhhHHhCCCHHHHHHhCHHHHHHHHHHHHHhhhhhHHHHHHhCC-ccCCce
Confidence 998877666667799999999999988 789999999999999999999999999999988888888999997 988999
Q ss_pred EEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCC-----CCCceEEeCCCCCCCCCCceeeehhhhhcCChhHHH
Q 021707 164 LVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPS-----IPGVTHIGGDMFNSIPAANAIFMKWVLATWTDDECK 238 (309)
Q Consensus 164 vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~-----~~ri~~~~~d~~~~~p~~D~i~~~~vlh~~~d~~~~ 238 (309)
|||||||+|.++..+++++|+++ ++++|+|.++...+. .+||+++.+|+++++|.+|+|++++++|+|+++++.
T Consensus 188 vLDvG~G~G~~~~~l~~~~p~~~-~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~~~ 266 (348)
T 3lst_A 188 VADVGGGRGGFLLTVLREHPGLQ-GVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREVPHADVHVLKRILHNWGDEDSV 266 (348)
T ss_dssp EEEETCTTSHHHHHHHHHCTTEE-EEEEECHHHHTTCCCCCGGGTTSEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHH
T ss_pred EEEECCccCHHHHHHHHHCCCCE-EEEecCHHHhhcccccccCCCCCeEEEecCCCCCCCCCcEEEEehhccCCCHHHHH
Confidence 99999999999999999999999 999999988873322 268999999999778866999999999999999999
Q ss_pred HHHHHHHHhcCCCcEEEEeccccCCCCCchhhhhhhhcccHhhhcccccCCcccce
Q 021707 239 LIMENCYKALLAGGKLIACEPVLLDDSNESQRTRALLEGDIFVMTIYRAKDDNSFY 294 (309)
Q Consensus 239 ~iL~~~~~aL~pgG~l~i~e~~~~~~~~~~~~~~~~~~~dl~ml~~~~~~g~~rt~ 294 (309)
++|++++++|+|||+|+|.|.+.++...+ .....+|+.|+. ..+|++||.
T Consensus 267 ~~L~~~~~~LkpgG~l~i~e~~~~~~~~~----~~~~~~d~~~~~--~~~~~~~t~ 316 (348)
T 3lst_A 267 RILTNCRRVMPAHGRVLVIDAVVPEGNDA----HQSKEMDFMMLA--ARTGQERTA 316 (348)
T ss_dssp HHHHHHHHTCCTTCEEEEEECCBCSSSSC----CHHHHHHHHHHH--TTSCCCCBH
T ss_pred HHHHHHHHhcCCCCEEEEEEeccCCCCCc----chhhhcChhhhh--cCCCcCCCH
Confidence 99999999999999999999998886432 134678999998 477888874
No 5
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=100.00 E-value=8.2e-42 Score=320.13 Aligned_cols=271 Identities=21% Similarity=0.355 Sum_probs=242.2
Q ss_pred chhhhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCce-EEcChhchhhhcCCCCCC
Q 021707 4 NECRDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERK-YSLTEIGKSLVTDAEGLS 82 (309)
Q Consensus 4 ~~~~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~-y~~t~~~~~l~~~~~~~~ 82 (309)
+.+++|+|+.+ .++|+|++|||+++ |++++.++|||++|++.|++++.+ ++. |++|+.++.|..+ ++.+
T Consensus 57 ~a~~lglf~~l-~~g~~t~~eLA~~~----g~~~~~l~rlLr~L~~~g~l~~~~----~~~~y~~t~~s~~L~~~-~~~~ 126 (369)
T 3gwz_A 57 VAVELGVPELL-QEGPRTATALAEAT----GAHEQTLRRLLRLLATVGVFDDLG----HDDLFAQNALSAVLLPD-PASP 126 (369)
T ss_dssp HHHHHTTGGGG-TTSCEEHHHHHHHH----TCCHHHHHHHHHHHHHTTSSEECS----STTEEECCHHHHTTSCC-TTCH
T ss_pred HHHHCChhhhh-cCCCCCHHHHHHHH----CcCHHHHHHHHHHHHhCCCEEEeC----CCceEecCHHHHHHhcC-Cchh
Confidence 46889999977 47899999999999 999999999999999999999975 678 9999999988655 5778
Q ss_pred hHHHHHHhcchhhhhhhhhHHHHhcCCCCChhhhhhCCChhhhhhcCchHHHHHHHHhhcCCcccHHHHHhhcCCCCCcc
Q 021707 83 YAPYVLQHHQDAFMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKMPEMNGLMRRAISGVSVPFMTSVLDSYNGFKGVK 162 (309)
Q Consensus 83 ~~~~i~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~ 162 (309)
+.+++.+...+..+..|.+|+++++++. ++|...+|.++|+|+.++|+..+.|.++|...+....+.+++.++ +++..
T Consensus 127 ~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~l~~~~~-~~~~~ 204 (369)
T 3gwz_A 127 VATDARFQAAPWHWRAWEQLTHSVRTGE-ASFDVANGTSFWQLTHEDPKARELFNRAMGSVSLTEAGQVAAAYD-FSGAA 204 (369)
T ss_dssp HHHHHHHHHSHHHHHHHHTHHHHHHHSS-CSHHHHHSSCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSC-CTTCS
T ss_pred HHHHHHHcCCHHHHHHHHhHHHHHhCCC-ChhHhhcCCCHHHHHHhCHHHHHHHHHHHHHHHhhhHHHHHHhCC-CccCc
Confidence 8888887666556789999999999988 789888999999999999999999999999887777788899997 88889
Q ss_pred eEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCC-------CCCceEEeCCCCCCCCC-CceeeehhhhhcCCh
Q 021707 163 RLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPS-------IPGVTHIGGDMFNSIPA-ANAIFMKWVLATWTD 234 (309)
Q Consensus 163 ~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~-------~~ri~~~~~d~~~~~p~-~D~i~~~~vlh~~~d 234 (309)
+|||||||+|.++..+++++|+++ ++++|+|.+++.+++ .+||+++.+|+++++|. +|+|++++++|+|++
T Consensus 205 ~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~~~D~v~~~~vlh~~~d 283 (369)
T 3gwz_A 205 TAVDIGGGRGSLMAAVLDAFPGLR-GTLLERPPVAEEARELLTGRGLADRCEILPGDFFETIPDGADVYLIKHVLHDWDD 283 (369)
T ss_dssp EEEEETCTTSHHHHHHHHHCTTCE-EEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCSSCSEEEEESCGGGSCH
T ss_pred EEEEeCCCccHHHHHHHHHCCCCe-EEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCCCCCCCCceEEEhhhhhccCCH
Confidence 999999999999999999999999 999999988888764 37899999999987885 699999999999999
Q ss_pred hHHHHHHHHHHHhcCCCcEEEEeccccCCCCCchhhhhhhhcccHhhhcccccCCcccce
Q 021707 235 DECKLIMENCYKALLAGGKLIACEPVLLDDSNESQRTRALLEGDIFVMTIYRAKDDNSFY 294 (309)
Q Consensus 235 ~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~~~~~~~~~~~~~~dl~ml~~~~~~g~~rt~ 294 (309)
+++.++|++++++|+|||+++|.|.+.++... . . ...+|+.|+. ..+|++||.
T Consensus 284 ~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~-~-~---~~~~d~~~~~--~~~g~~~t~ 336 (369)
T 3gwz_A 284 DDVVRILRRIATAMKPDSRLLVIDNLIDERPA-A-S---TLFVDLLLLV--LVGGAERSE 336 (369)
T ss_dssp HHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCC-H-H---HHHHHHHHHH--HHSCCCBCH
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCC-C-c---hhHhhHHHHh--hcCCccCCH
Confidence 99999999999999999999999999988754 1 1 4679999998 478888875
No 6
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=100.00 E-value=3.5e-42 Score=317.88 Aligned_cols=269 Identities=20% Similarity=0.284 Sum_probs=235.1
Q ss_pred chhhhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhcCCCCCCh
Q 021707 4 NECRDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVTDAEGLSY 83 (309)
Q Consensus 4 ~~~~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~~~~~~~~ 83 (309)
+.+++|+|+.+ .++|.|++|||+++ |++++.++|||++|++.|++.+.+ ++.|.+|+.++.|..+ ++.++
T Consensus 24 ~a~~lglf~~l-~~g~~t~~elA~~~----~~~~~~l~rlLr~l~~~gl~~~~~----~~~y~~t~~s~~l~~~-~~~~~ 93 (332)
T 3i53_A 24 VAATLRVADHI-AAGHRTAAEIASAA----GAHADSLDRLLRHLVAVGLFTRDG----QGVYGLTEFGEQLRDD-HAAGK 93 (332)
T ss_dssp HHHHHTHHHHH-HTTCCBHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEECT----TSBEEECTTGGGGSTT-CTTCC
T ss_pred HHHHcChHHHH-hcCCCCHHHHHHHH----CcCHHHHHHHHHHHHhCCcEEecC----CCeEEcCHhHHHHhcC-CchhH
Confidence 46889999977 46899999999999 999999999999999999999985 6899999999998665 56788
Q ss_pred HHHHHHhcchhhh-hhhhhHHHHhcCCCCChhhhhhCCChhhhhhcCchHHHHHHHHhhcCCcccHHHHHhhcCCCCCcc
Q 021707 84 APYVLQHHQDAFM-SAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKMPEMNGLMRRAISGVSVPFMTSVLDSYNGFKGVK 162 (309)
Q Consensus 84 ~~~i~~~~~~~~~-~~~~~L~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~ 162 (309)
.+++.+......+ +.|.+|+++++++. ++|+..+|.++|+|+.++|+..+.|.++|...+....+.+++.++ +++..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~-~~~~~ 171 (332)
T 3i53_A 94 RKWLDMNSAVGRGDLGFVELAHSIRTGQ-PAYPVRYGTSFWEDLGSDPVLSASFDTLMSHHLELDYTGIAAKYD-WAALG 171 (332)
T ss_dssp HHHHCTTSHHHHHGGGGGGHHHHHHHSS-CSHHHHHSSCHHHHHHHCHHHHHHHHHHHHHHHHHHHTTGGGSSC-CGGGS
T ss_pred HHHHHHcCCHhHHHHHHHHhHHHHhcCC-CHHHHhhCCCHHHHHHhCHHHHHHHHHHHHHhHHhhHHHHHHhCC-CCCCC
Confidence 8888765544455 78999999999988 789888999999999999999999999999876655666777776 88889
Q ss_pred eEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCC-------CCCceEEeCCCCCCCCC-CceeeehhhhhcCCh
Q 021707 163 RLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPS-------IPGVTHIGGDMFNSIPA-ANAIFMKWVLATWTD 234 (309)
Q Consensus 163 ~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~-------~~ri~~~~~d~~~~~p~-~D~i~~~~vlh~~~d 234 (309)
+|||||||+|.++..+++++|+.+ ++++|+|.+++.+++ .+||+++.+|+++++|. +|+|++++++|+|++
T Consensus 172 ~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~~~D~v~~~~vlh~~~~ 250 (332)
T 3i53_A 172 HVVDVGGGSGGLLSALLTAHEDLS-GTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGAGGYVLSAVLHDWDD 250 (332)
T ss_dssp EEEEETCTTSHHHHHHHHHCTTCE-EEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCSCSEEEEESCGGGSCH
T ss_pred EEEEeCCChhHHHHHHHHHCCCCe-EEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCCCCcEEEEehhhccCCH
Confidence 999999999999999999999999 999999999888764 27899999999987884 699999999999999
Q ss_pred hHHHHHHHHHHHhcCCCcEEEEeccccCCCCCchhhhhhhhcccHhhhcccccCCcccce
Q 021707 235 DECKLIMENCYKALLAGGKLIACEPVLLDDSNESQRTRALLEGDIFVMTIYRAKDDNSFY 294 (309)
Q Consensus 235 ~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~~~~~~~~~~~~~~dl~ml~~~~~~g~~rt~ 294 (309)
+++.++|++++++|+|||+++|.|.+.++. .+ ...+|+.|+. ..+|++||.
T Consensus 251 ~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~-~~------~~~~d~~~~~--~~~~~~~t~ 301 (332)
T 3i53_A 251 LSAVAILRRCAEAAGSGGVVLVIEAVAGDE-HA------GTGMDLRMLT--YFGGKERSL 301 (332)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEECCCC----C------CHHHHHHHHH--HHSCCCCCH
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEeecCCCC-Cc------cHHHHHHHHh--hCCCCCCCH
Confidence 999999999999999999999999998876 21 2478999998 478888875
No 7
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=100.00 E-value=5.2e-41 Score=314.88 Aligned_cols=282 Identities=34% Similarity=0.577 Sum_probs=229.6
Q ss_pred chhhhhhhhhhcCCC-C---CCHHHHHHHhCcCCCC------CcchHHHHHHHHHcCCceeee----cccccCceEEcCh
Q 021707 4 NECRDGRKKVRLANT-P---LSVSQILTCILPSGGG------DAENLQCILRLLTSYGVFSEH----REFRGERKYSLTE 69 (309)
Q Consensus 4 ~~~~~g~~~~~l~~~-~---~t~~eLA~~~~~~~g~------~~~~l~rlL~~L~~~gll~~~----~~~~~~~~y~~t~ 69 (309)
+.+++|+|+.+-..+ | +|++|||+++ |+ +++.++||||+|++.|+|++. +.+..++.|++|+
T Consensus 43 ~a~~lgif~~L~~~g~pg~~~t~~eLA~~~----~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~g~~~~~y~~t~ 118 (372)
T 1fp1_D 43 AAIDLNLFEIIAKATPPGAFMSPSEIASKL----PASTQHSDLPNRLDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSM 118 (372)
T ss_dssp HHHHTTHHHHHHTCSSTTCCBCHHHHHTTS----CGGGCCTTHHHHHHHHHHHHHHTTSEEEEEEECTTSCEEEEEEECT
T ss_pred HHHHCChHHHHHhcCCCCCCcCHHHHHHhc----CCCCCCCcChHHHHHHHHHHhhCCceEecccccCCCCcCCeEecCH
Confidence 357899999886655 7 9999999999 98 678999999999999999987 2000025899999
Q ss_pred hchhhhcCCCC-CChHHHHHHhcchhhhhhhhhHHHHhcCC-CCChhhhhhCCChhhhhhcCchHHHHHHHHhhcCCccc
Q 021707 70 IGKSLVTDAEG-LSYAPYVLQHHQDAFMSAWPLVHEAVLDP-TIEPFVKVHGEPAYSYYGKMPEMNGLMRRAISGVSVPF 147 (309)
Q Consensus 70 ~~~~l~~~~~~-~~~~~~i~~~~~~~~~~~~~~L~~~l~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~ 147 (309)
.++.|+.+ +| .++++++.+..++.+++.|.+|+++++++ . ++|+..+|.++|+|+.++|+..+.|.++|...+...
T Consensus 119 ~s~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~ 196 (372)
T 1fp1_D 119 VGKYLVPD-ESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDI-DLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATE 196 (372)
T ss_dssp TGGGGSTT-CTTCCCTHHHHHHTCHHHHHHHTTHHHHHHSCC---------------CCSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCC-CCCCCHHHHHHHhcCchHHHHHHHHHHHHHcCCC-ChhHHHhCCCHHHHHHhCHHHHHHHHHHHHhhhHHH
Confidence 99988765 45 67889888776667788999999999998 6 789888999999999999999999999998877766
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCCCCCceEEeCCCCCCCCCCceeeehh
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPSIPGVTHIGGDMFNSIPAANAIFMKW 227 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~~~ri~~~~~d~~~~~p~~D~i~~~~ 227 (309)
.+.+++.++.+++..+|||||||+|.++..+++++|+++ ++++|+|.+++.+++.++++++.+|+++++|.+|+|++++
T Consensus 197 ~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~-~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~~~~D~v~~~~ 275 (372)
T 1fp1_D 197 MKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIK-GINFDLPQVIENAPPLSGIEHVGGDMFASVPQGDAMILKA 275 (372)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCE-EEEEECHHHHTTCCCCTTEEEEECCTTTCCCCEEEEEEES
T ss_pred HHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCe-EEEeChHHHHHhhhhcCCCEEEeCCcccCCCCCCEEEEec
Confidence 778888885477788999999999999999999999999 9999999999999988899999999998877789999999
Q ss_pred hhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCCCCchhhhhhhhcccHhhhcccccCCcccce
Q 021707 228 VLATWTDDECKLIMENCYKALLAGGKLIACEPVLLDDSNESQRTRALLEGDIFVMTIYRAKDDNSFY 294 (309)
Q Consensus 228 vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~~~~~~~~~~~~~~dl~ml~~~~~~g~~rt~ 294 (309)
+||+|+++++.++|++++++|+|||+++|.|.+.++.......++....+|+.|+. ..+|++||.
T Consensus 276 ~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~t~ 340 (372)
T 1fp1_D 276 VCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFI--TVGGRERTE 340 (372)
T ss_dssp SGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHH--HHSCCCEEH
T ss_pred ccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHh--ccCCccCCH
Confidence 99999999999999999999999999999999988765422222245689999997 456887764
No 8
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=100.00 E-value=5.9e-41 Score=312.90 Aligned_cols=282 Identities=26% Similarity=0.412 Sum_probs=240.0
Q ss_pred chhhhhhhhhhcCC-CCCCHHHHHHHhCcCCCC---CcchHHHHHHHHHcCCceeee-----c-ccccCceEEcChhchh
Q 021707 4 NECRDGRKKVRLAN-TPLSVSQILTCILPSGGG---DAENLQCILRLLTSYGVFSEH-----R-EFRGERKYSLTEIGKS 73 (309)
Q Consensus 4 ~~~~~g~~~~~l~~-~~~t~~eLA~~~~~~~g~---~~~~l~rlL~~L~~~gll~~~-----~-~~~~~~~y~~t~~~~~ 73 (309)
+.+++|+|+.+-.. +|+|++|||+++ |+ +++.++||||+|++.|+|++. + .+..++.|++|+.++.
T Consensus 29 ~a~~lgif~~L~~~~~~~t~~eLA~~~----g~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~~~g~~~~~y~~t~~s~~ 104 (358)
T 1zg3_A 29 SAMELGIADAIHNHGKPMTLSELASSL----KLHPSKVNILHRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKL 104 (358)
T ss_dssp HHHHHTHHHHHHHHTSCEEHHHHHHHT----TCCTTTHHHHHHHHHHHHHTTSEEEEEECCSSSSCCCEEEEEECHHHHT
T ss_pred HHHHCChHhHHhhcCCCcCHHHHHHhc----CCCCcchHHHHHHHHHHhhCCcEEEecccccccCCCCCCEEeCCHHHHH
Confidence 35788999987553 599999999999 99 578999999999999999987 1 1000368999999998
Q ss_pred hhcCCCCCChHHHHHHhcchhhhhhhhhHHHHhcCCC-CChhhhhhCCChhhhhhcCchHHH--HHHHHhhcCCcccHHH
Q 021707 74 LVTDAEGLSYAPYVLQHHQDAFMSAWPLVHEAVLDPT-IEPFVKVHGEPAYSYYGKMPEMNG--LMRRAISGVSVPFMTS 150 (309)
Q Consensus 74 l~~~~~~~~~~~~i~~~~~~~~~~~~~~L~~~l~~~~-~~~~~~~~g~~~~~~~~~~~~~~~--~f~~~m~~~~~~~~~~ 150 (309)
|+.+ +|.++++++.+..++.+++.|.+|+++++++. .++|+.++|.++|+|+.++|+..+ .|+++|...+.... .
T Consensus 105 l~~~-~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~~~g~~~~~~~~~~p~~~~~~~f~~~m~~~~~~~~-~ 182 (358)
T 1zg3_A 105 LISG-KPTCLSSIVKGALHPSSLDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFK-L 182 (358)
T ss_dssp TCTT-STTCCHHHHHHHTSHHHHGGGGGHHHHHHCSCCCCHHHHHHSSCHHHHHTSGGGHHHHHHHHHHHHHHHHTHH-H
T ss_pred HhCC-CCccHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChHHHHhCCCHHHHHhcChhhhhHHHHHHHHhcccHHHH-H
Confidence 8866 56789999888766777899999999999983 278998899999999999999999 99999998776555 6
Q ss_pred HHhhcC-CCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCCCCCceEEeCCCCCCCCCCceeeehhhh
Q 021707 151 VLDSYN-GFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPSIPGVTHIGGDMFNSIPAANAIFMKWVL 229 (309)
Q Consensus 151 ~~~~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~~~ri~~~~~d~~~~~p~~D~i~~~~vl 229 (309)
+++.++ .+++..+|||||||+|.++..+++++|+++ ++++|+|.+++.+++.++|+++.+|+++++|.+|+|+++++|
T Consensus 183 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~~~~D~v~~~~vl 261 (358)
T 1zg3_A 183 VLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLK-CTVFDQPQVVGNLTGNENLNFVGGDMFKSIPSADAVLLKWVL 261 (358)
T ss_dssp HHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSE-EEEEECHHHHSSCCCCSSEEEEECCTTTCCCCCSEEEEESCG
T ss_pred HHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCe-EEEeccHHHHhhcccCCCcEEEeCccCCCCCCceEEEEcccc
Confidence 777772 266778999999999999999999999999 999999999999988788999999999988878999999999
Q ss_pred hcCChhHHHHHHHHHHHhcCC---CcEEEEeccccCCCCCchhhhhhhhcccHhhhcccccCCcccce
Q 021707 230 ATWTDDECKLIMENCYKALLA---GGKLIACEPVLLDDSNESQRTRALLEGDIFVMTIYRAKDDNSFY 294 (309)
Q Consensus 230 h~~~d~~~~~iL~~~~~aL~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~dl~ml~~~~~~g~~rt~ 294 (309)
|+|+++++.++|++++++|+| ||+++|.|.+.++.+..+........+|+.|+. ..+|++||.
T Consensus 262 h~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~--~~~g~~~t~ 327 (358)
T 1zg3_A 262 HDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLT--MFLGKERTK 327 (358)
T ss_dssp GGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHH--HHSCCCEEH
T ss_pred cCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhc--cCCCCCCCH
Confidence 999999999999999999999 999999999988765421011245689999998 467888764
No 9
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.4e-40 Score=307.07 Aligned_cols=268 Identities=22% Similarity=0.362 Sum_probs=236.7
Q ss_pred chhhhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhcCCCCCCh
Q 021707 4 NECRDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVTDAEGLSY 83 (309)
Q Consensus 4 ~~~~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~~~~~~~~ 83 (309)
+.+++|+|+.+ .++|.|++|||+++ |++++.++|||++|++.|++++.+ ++.|++|+.++.|. + +|.++
T Consensus 27 ~~~~lgi~~~l-~~~~~t~~ela~~~----~~~~~~l~r~Lr~L~~~g~l~~~~----~~~y~~t~~s~~l~-~-~~~~~ 95 (334)
T 2ip2_A 27 VATRLGLADLI-ESGIDSDETLAAAV----GSDAERIHRLMRLLVAFEIFQGDT----RDGYANTPTSHLLR-D-VEGSF 95 (334)
T ss_dssp HHHHTTHHHHH-HTTCCSHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEET----TTEEEECHHHHTTS-S-STTCS
T ss_pred HHHHcCcHHHH-hCCCCCHHHHHHHh----CcCHHHHHHHHHHHHhCCceEecC----CCeEecCHHHHHHh-C-CCccH
Confidence 35789999987 46899999999999 999999999999999999999885 68999999999888 4 57789
Q ss_pred HHHHHHhcchhhhhhhhhHHHHhcCCCCChhhhhhCCChhhhhhcCchHHHHHHHHhhcCCcccHHHHHhhcCCCCCcce
Q 021707 84 APYVLQHHQDAFMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKMPEMNGLMRRAISGVSVPFMTSVLDSYNGFKGVKR 163 (309)
Q Consensus 84 ~~~i~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~ 163 (309)
++++.+..++.. +.|.+|+++++++. ++|+..+|.++|+|+.++|+..+.|.++| ..+....+.+++.++ +++ .+
T Consensus 96 ~~~~~~~~~~~~-~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m-~~~~~~~~~~~~~~~-~~~-~~ 170 (334)
T 2ip2_A 96 RDMVLFYGEEFH-AAWTPACEALLSGT-PGFELAFGEDFYSYLKRCPDAGRRFLLAM-KASNLAFHEIPRLLD-FRG-RS 170 (334)
T ss_dssp HHHHHHHTTHHH-HHTTTHHHHHHHCC-CHHHHHHSSCHHHHHHHCHHHHHHHHHHH-GGGHHHHHHHHHHSC-CTT-CE
T ss_pred HHHHHHhcCchh-hHHHHHHHHHhcCC-ChhhhhcCCCHHHHHhhChHHHHHHHHHH-HHHHHHHHHHHHhCC-CCC-CE
Confidence 998887766545 89999999999988 79988899999999999999999999999 777777788888886 877 99
Q ss_pred EEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCCC-------CCceEEeCCCCCCCCC-CceeeehhhhhcCChh
Q 021707 164 LVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPSI-------PGVTHIGGDMFNSIPA-ANAIFMKWVLATWTDD 235 (309)
Q Consensus 164 vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~~-------~ri~~~~~d~~~~~p~-~D~i~~~~vlh~~~d~ 235 (309)
|||||||+|.++..+++++|+.+ ++++|+|.+++.+++. +||+++.+|+++++|. +|+|++++++|+|+++
T Consensus 171 vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~~~~~~ 249 (334)
T 2ip2_A 171 FVDVGGGSGELTKAILQAEPSAR-GVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRIIGDLDEA 249 (334)
T ss_dssp EEEETCTTCHHHHHHHHHCTTCE-EEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTCCCSSCSEEEEESCGGGCCHH
T ss_pred EEEeCCCchHHHHHHHHHCCCCE-EEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCCCCCCCCEEEEchhccCCCHH
Confidence 99999999999999999999999 9999998888777642 6899999999988776 5999999999999999
Q ss_pred HHHHHHHHHHHhcCCCcEEEEeccccCCCCCchhhhhhhhcccHhhhcccccCCcccce
Q 021707 236 ECKLIMENCYKALLAGGKLIACEPVLLDDSNESQRTRALLEGDIFVMTIYRAKDDNSFY 294 (309)
Q Consensus 236 ~~~~iL~~~~~aL~pgG~l~i~e~~~~~~~~~~~~~~~~~~~dl~ml~~~~~~g~~rt~ 294 (309)
++.++|++++++|+|||+++|.|.+.++++.+ .....+|+.|+. ..+|++||.
T Consensus 250 ~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~t~ 302 (334)
T 2ip2_A 250 ASLRLLGNCREAMAGDGRVVVIERTISASEPS----PMSVLWDVHLFM--ACAGRHRTT 302 (334)
T ss_dssp HHHHHHHHHHHHSCTTCEEEEEECCBCSSSCC----HHHHHHHHHHHH--HHSCCCCBH
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEeccCCCCCc----chhHHhhhHhHh--hCCCcCCCH
Confidence 99999999999999999999999998876432 235678999998 457888873
No 10
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=100.00 E-value=2.3e-40 Score=308.26 Aligned_cols=277 Identities=25% Similarity=0.401 Sum_probs=238.2
Q ss_pred chhhhhhhhhhcCC-CCCCHHHHHHHhCcCCCCC---cchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhcCCC
Q 021707 4 NECRDGRKKVRLAN-TPLSVSQILTCILPSGGGD---AENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVTDAE 79 (309)
Q Consensus 4 ~~~~~g~~~~~l~~-~~~t~~eLA~~~~~~~g~~---~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~~~~ 79 (309)
+.+++|+|+.+-.. +|.|++|||+++ |++ ++.++||||+|++.|+|++... +++.|++|+.++.|+.+ +
T Consensus 35 ~a~~lgif~~L~~~~~~~t~~ela~~~----~~~~~~~~~l~rlLr~L~~~gll~~~~~--~~~~y~~t~~s~~L~~~-~ 107 (352)
T 1fp2_A 35 WAVEMNIPNIIQNHGKPISLSNLVSIL----QVPSSKIGNVRRLMRYLAHNGFFEIITK--EEESYALTVASELLVRG-S 107 (352)
T ss_dssp HHHHTTHHHHHHHHTSCEEHHHHHHHH----TCCGGGHHHHHHHHHHHHHTTSEEEEES--SSEEEEECHHHHTTSTT-S
T ss_pred HHHHCChhhhhhhcCCCccHHHHHHHh----CcCCCChHHHHHHHHHHHhCCeEEEecC--CCCeEeCCHHHHHHhCC-C
Confidence 35789999987553 599999999999 995 7899999999999999998720 15799999999988865 5
Q ss_pred CCChHHHHHHhcchhhhhhhhhHHHHhc-CCCCChhhhhhCCChhhhhhcCchHHHHHHHHhhcCCcccHHHHHhhc--C
Q 021707 80 GLSYAPYVLQHHQDAFMSAWPLVHEAVL-DPTIEPFVKVHGEPAYSYYGKMPEMNGLMRRAISGVSVPFMTSVLDSY--N 156 (309)
Q Consensus 80 ~~~~~~~i~~~~~~~~~~~~~~L~~~l~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~--~ 156 (309)
|.++++++.+..++.+++.|.+|+++++ +|. ++|+.++|.++|+|+.++|+..+.|.++|...+....+. ++.+ +
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~-~~~~~~~ 185 (352)
T 1fp2_A 108 DLCLAPMVECVLDPTLSGSYHELKKWIYEEDL-TLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLA-LRDCDFV 185 (352)
T ss_dssp SSCCHHHHHHHTCHHHHHGGGGHHHHHTCSSC-CHHHHHHSSCHHHHHHHCHHHHHHHHHHHHHTHHHHHHH-HHTCHHH
T ss_pred CccHHHHHHHhcCchHHHHHHHHHHHHHhcCC-ChHHHHcCCCHHHHHHhChHHHHHHHHHHHhcchhhhhH-HHhcccc
Confidence 6789998887766667889999999999 776 899999999999999999999999999999887766666 7777 4
Q ss_pred CCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCCCCCceEEeCCCCCCCCCCceeeehhhhhcCChhH
Q 021707 157 GFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPSIPGVTHIGGDMFNSIPAANAIFMKWVLATWTDDE 236 (309)
Q Consensus 157 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~~~ri~~~~~d~~~~~p~~D~i~~~~vlh~~~d~~ 236 (309)
+++..+|||||||+|.++..+++++|+++ ++++|+|.+++.+++.++++++.+|+++++|.+|+|++++++|+|++++
T Consensus 186 -~~~~~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~p~~D~v~~~~~lh~~~d~~ 263 (352)
T 1fp2_A 186 -FDGLESIVDVGGGTGTTAKIICETFPKLK-CIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKD 263 (352)
T ss_dssp -HTTCSEEEEETCTTSHHHHHHHHHCTTCE-EEEEECHHHHTTCCCBTTEEEEECCTTTCCCCCSEEEEESCGGGSCHHH
T ss_pred -cccCceEEEeCCCccHHHHHHHHHCCCCe-EEEeeCHHHHhhcccCCCcEEEeccccCCCCCccEEEeehhhccCCHHH
Confidence 67778999999999999999999999999 9999999999999888889999999998888789999999999999999
Q ss_pred HHHHHHHHHHhcCC---CcEEEEeccccCCCCCchhhhhhhhcccHhhhcccccCCcccce
Q 021707 237 CKLIMENCYKALLA---GGKLIACEPVLLDDSNESQRTRALLEGDIFVMTIYRAKDDNSFY 294 (309)
Q Consensus 237 ~~~iL~~~~~aL~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~dl~ml~~~~~~g~~rt~ 294 (309)
+.++|++++++|+| ||+++|.|...++.+...........+|+.|+. . +|++||.
T Consensus 264 ~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~-~--~g~~~t~ 321 (352)
T 1fp2_A 264 CLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMAC-L--NGKERNE 321 (352)
T ss_dssp HHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGG-G--TCCCEEH
T ss_pred HHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHh-c--cCCCCCH
Confidence 99999999999999 999999999988765321111245678999987 3 3777764
No 11
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=100.00 E-value=2.9e-38 Score=295.44 Aligned_cols=270 Identities=17% Similarity=0.177 Sum_probs=215.8
Q ss_pred chhhhhhhhhhcC-CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhcCCCCCC
Q 021707 4 NECRDGRKKVRLA-NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVTDAEGLS 82 (309)
Q Consensus 4 ~~~~~g~~~~~l~-~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~~~~~~~ 82 (309)
+.+++|+|+.+-. ++|+|++|||+++ |++++.++|||++|++.|+|++. ++.|++|+.++.|+.+. +
T Consensus 34 ~a~~lgifd~L~~~~~~~t~~eLA~~~----g~~~~~l~rlLr~l~~~g~l~~~-----~~~y~~t~~s~~L~~~~-~-- 101 (363)
T 3dp7_A 34 LMLKFGIFQLLSGKREGYTLQEISGRT----GLTRYAAQVLLEASLTIGTILLE-----EDRYVLAKAGWFLLNDK-M-- 101 (363)
T ss_dssp HHHHTTHHHHHHTCTTCBCHHHHHHHH----TCCHHHHHHHHHHHHHHTSEEEE-----TTEEEECHHHHHHHHCH-H--
T ss_pred HHHHhCHHHHHHhcCCCCCHHHHHHHh----CcCHHHHHHHHHHHhhCCCeEec-----CCEEecccchHHhhCCC-c--
Confidence 4588999998765 5899999999999 99999999999999999999886 58999999998888753 2
Q ss_pred hHHHHHHhcchhhhhhhhhHHHHhcCCCCChhhhhhC--CChhhhhhcCchHHHH----HHHHhhcCCcccHHHHHhhcC
Q 021707 83 YAPYVLQHHQDAFMSAWPLVHEAVLDPTIEPFVKVHG--EPAYSYYGKMPEMNGL----MRRAISGVSVPFMTSVLDSYN 156 (309)
Q Consensus 83 ~~~~i~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~----f~~~m~~~~~~~~~~~~~~~~ 156 (309)
...++.+ ..+..++.|.+|+++++++. +++...+| .++|+++.++|+..+. |..+|.... ...+++.+.
T Consensus 102 ~~~~~~~-~~~~~~~~~~~L~~~lr~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~---~~~~l~~~~ 176 (363)
T 3dp7_A 102 ARVNMEF-NHDVNYQGLFHLEEALLNGR-PEGLKVFGEWPTIYEGLSQLPEQVQKSWFGFDHFYSDQS---FGKALEIVF 176 (363)
T ss_dssp HHHHHHH-HHHTTHHHHTTHHHHHHHSS-CGGGGGTCCCSSHHHHGGGSCHHHHHHHHHHHHHTTCCC---CHHHHHHHG
T ss_pred ccchhee-ecHHhhhhHHHHHHHHhcCC-CccccccCchHhHHHHHhhCHHHHHHHHHHHHHHhhhhh---HHHHHHHhc
Confidence 2223333 33457789999999999988 67777887 6899999999987763 555555433 234555543
Q ss_pred CCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCCC-------CCceEEeCCCCCC---CCC-Cceeee
Q 021707 157 GFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPSI-------PGVTHIGGDMFNS---IPA-ANAIFM 225 (309)
Q Consensus 157 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~~-------~ri~~~~~d~~~~---~p~-~D~i~~ 225 (309)
..+..+|||||||+|.++..+++++|+++ ++++|+|.+++.++++ +||+++.+|++++ +|+ +|+|++
T Consensus 177 -~~~~~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~ 254 (363)
T 3dp7_A 177 -SHHPKRLLDIGGNTGKWATQCVQYNKEVE-VTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWM 254 (363)
T ss_dssp -GGCCSEEEEESCTTCHHHHHHHHHSTTCE-EEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEE
T ss_pred -ccCCCEEEEeCCCcCHHHHHHHHhCCCCE-EEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEE
Confidence 35678999999999999999999999999 9999999998887642 5899999999985 564 599999
Q ss_pred hhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCCCCchh-hhhhhhcccHhhhcccccCCcccce
Q 021707 226 KWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLDDSNESQ-RTRALLEGDIFVMTIYRAKDDNSFY 294 (309)
Q Consensus 226 ~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~~~~~~-~~~~~~~~dl~ml~~~~~~g~~rt~ 294 (309)
+++||+|+++++.++|++++++|+|||+|+|.|.+.++.+.... ........++.|+. ..+|++||.
T Consensus 255 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~t~ 322 (363)
T 3dp7_A 255 SQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMA--NGNSKMFHS 322 (363)
T ss_dssp ESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSS--CSSCCSCCH
T ss_pred echhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhh--CCCCcccCH
Confidence 99999999999999999999999999999999999988754211 11112334555555 567787764
No 12
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=100.00 E-value=2.1e-38 Score=296.80 Aligned_cols=272 Identities=18% Similarity=0.241 Sum_probs=232.0
Q ss_pred chhhhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCc--eEEcChhchhhhcCCCCC
Q 021707 4 NECRDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGER--KYSLTEIGKSLVTDAEGL 81 (309)
Q Consensus 4 ~~~~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~--~y~~t~~~~~l~~~~~~~ 81 (309)
+.+++|+|+.+ .++|.|++|||+++ |++++.++|||++|++.|++++.+ ++ .|++|+.++.|..+ ++.
T Consensus 35 ~~~~l~i~~~l-~~~~~t~~eLA~~~----g~~~~~l~r~Lr~L~~~Gll~~~~----~~~~~y~~t~~s~~l~~~-~~~ 104 (374)
T 1qzz_A 35 VAATLRLVDHL-LAGADTLAGLADRT----DTHPQALSRLVRHLTVVGVLEGGE----KQGRPLRPTRLGMLLADG-HPA 104 (374)
T ss_dssp HHHHTTHHHHH-HTTCCSHHHHHHHH----TCCHHHHHHHHHHHHHTTSEECCC----C-CCCCEECTTGGGGSTT-CTT
T ss_pred HHHHcChHHHH-hCCCCCHHHHHHHh----CcCHHHHHHHHHHHhhCCCEEEeC----CCCeEEEEChHHHhhcCC-Ccc
Confidence 35789999988 67899999999999 999999999999999999999864 56 99999999888866 577
Q ss_pred ChHHHHHHhcchhhh-hhhhhHHHHhcCCCCChhhhhhCCChhhhhhcCchHHHHHHHHhhcCCcccHHHHHhhcCCCCC
Q 021707 82 SYAPYVLQHHQDAFM-SAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKMPEMNGLMRRAISGVSVPFMTSVLDSYNGFKG 160 (309)
Q Consensus 82 ~~~~~i~~~~~~~~~-~~~~~L~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~ 160 (309)
++++++.+...+..+ ..|.+|+++++++. ++|...+|.++|+++..+|+..+.|.++|........+.+++.++ +.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~-~~~ 182 (374)
T 1qzz_A 105 QQRAWLDLNGAVSHADLAFTGLLDVVRTGR-PAYAGRYGRPFWEDLSADVALADSFDALMSCDEDLAYEAPADAYD-WSA 182 (374)
T ss_dssp CHHHHHCTTSHHHHHHGGGGGHHHHHHHSC-CSHHHHHSSCHHHHHHHCHHHHHHHHHTCGGGSTTTTHHHHHTSC-CTT
T ss_pred cHHHHHHHcCChhhHHHHHHHHHHHHhcCC-ChhhhhhCCCHHHHHhhChHHHHHHHHHHHHhhHhHHHHHHHhCC-CCC
Confidence 888887766544456 89999999999988 688888899999999999999999999999888777788999886 888
Q ss_pred cceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCCC-------CCceEEeCCCCCCCCC-CceeeehhhhhcC
Q 021707 161 VKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPSI-------PGVTHIGGDMFNSIPA-ANAIFMKWVLATW 232 (309)
Q Consensus 161 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~~-------~ri~~~~~d~~~~~p~-~D~i~~~~vlh~~ 232 (309)
..+|||||||+|.++..+++.+|+.+ ++++|++.+++.++++ ++|+++.+|+++++|. +|+|++++++|+|
T Consensus 183 ~~~vlDvG~G~G~~~~~l~~~~~~~~-~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~~~ 261 (374)
T 1qzz_A 183 VRHVLDVGGGNGGMLAAIALRAPHLR-GTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSFVLLNW 261 (374)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCTTCE-EEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCEEEEEEESCGGGS
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCE-EEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCCCCCEEEEeccccCC
Confidence 89999999999999999999999999 9999998888877642 4899999999987776 5999999999999
Q ss_pred ChhHHHHHHHHHHHhcCCCcEEEEecc--ccCCCCCchhhhhhhhcccHhhhcccccCCcccce
Q 021707 233 TDDECKLIMENCYKALLAGGKLIACEP--VLLDDSNESQRTRALLEGDIFVMTIYRAKDDNSFY 294 (309)
Q Consensus 233 ~d~~~~~iL~~~~~aL~pgG~l~i~e~--~~~~~~~~~~~~~~~~~~dl~ml~~~~~~g~~rt~ 294 (309)
+++++.++|++++++|+|||+++|.|. +.+++.. . .....+|+.|+. ..+|+.||.
T Consensus 262 ~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~-~---~~~~~~~~~~~~--~~~~~~~~~ 319 (374)
T 1qzz_A 262 SDEDALTILRGCVRALEPGGRLLVLDRADVEGDGAD-R---FFSTLLDLRMLT--FMGGRVRTR 319 (374)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEECCH--------H---HHHHHHHHHHHH--HHSCCCCCH
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCC-c---chhhhcchHHHH--hCCCcCCCH
Confidence 999999999999999999999999999 8766532 1 235678999887 356776654
No 13
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=100.00 E-value=6.5e-38 Score=292.14 Aligned_cols=271 Identities=19% Similarity=0.307 Sum_probs=235.8
Q ss_pred hhhhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhcCCCCCChH
Q 021707 5 ECRDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVTDAEGLSYA 84 (309)
Q Consensus 5 ~~~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~~~~~~~~~ 84 (309)
.+++|+|+.+ .++|.|++|||+++ |++++.+.|+|++|++.|+|.+.+ +++|++|+.++.|+.+ +|.+++
T Consensus 39 ~~~l~i~~~l-~~~~~t~~ela~~~----~~~~~~l~r~L~~L~~~g~~~~~~----~g~y~~t~~s~~l~~~-~~~~~~ 108 (360)
T 1tw3_A 39 AATLRLVDHI-LAGARTVKALAART----DTRPEALLRLIRHLVAIGLLEEDA----PGEFVPTEVGELLADD-HPAAQR 108 (360)
T ss_dssp HHHTTHHHHH-HTTCCBHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEE----TTEEEECTTGGGGSTT-STTCHH
T ss_pred HHHhCHHHHH-hCCCCCHHHHHHHh----CcCHHHHHHHHHHHHHCCCEEecC----CCeEEeCHHHHHHhcC-CchhHH
Confidence 5789999987 57899999999999 999999999999999999999875 6899999999888876 577888
Q ss_pred HHHHHhcchh-hhhhhhhHHHHhcCCCCChhhhhhCCChhhhhhcCchHHHHHHHHhhcCCcccHHHHHhhcCCCCCcce
Q 021707 85 PYVLQHHQDA-FMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKMPEMNGLMRRAISGVSVPFMTSVLDSYNGFKGVKR 163 (309)
Q Consensus 85 ~~i~~~~~~~-~~~~~~~L~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~ 163 (309)
+++.+...+. .+..|.+|.+.++++. ++|+..+|.++|+++..+|+....|...|...+....+.+++.++ +.+..+
T Consensus 109 ~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~p~~~~~f~~~~~~~~~~~~~~l~~~~~-~~~~~~ 186 (360)
T 1tw3_A 109 AWHDLTQAVARADISFTRLPDAIRTGR-PTYESIYGKPFYEDLAGRPDLRASFDSLLACDQDVAFDAPAAAYD-WTNVRH 186 (360)
T ss_dssp HHTCTTSHHHHHGGGGGGHHHHHHHCC-CCHHHHHSSCHHHHHHTCHHHHHHHHHHHTTTTTTTTHHHHHHSC-CTTCSE
T ss_pred HHHHHhcCchhHHHHHHHHHHHHHcCC-CHHHHhcCCCHHHHHHhChHHHHHHHHHHHHHHHHhHHHHHHhCC-CccCcE
Confidence 8776654443 5689999999999987 688888899999999889999999999999888877888899986 888899
Q ss_pred EEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCCC-------CCceEEeCCCCCCCCC-CceeeehhhhhcCChh
Q 021707 164 LVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPSI-------PGVTHIGGDMFNSIPA-ANAIFMKWVLATWTDD 235 (309)
Q Consensus 164 vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~~-------~ri~~~~~d~~~~~p~-~D~i~~~~vlh~~~d~ 235 (309)
|||||||+|.++..+++++|+++ ++++|++.+++.++++ ++++++.+|+++++|. +|+|++.+++|+|+++
T Consensus 187 vLDvG~G~G~~~~~l~~~~~~~~-~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~~~~~~ 265 (360)
T 1tw3_A 187 VLDVGGGKGGFAAAIARRAPHVS-ATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIILSFVLLNWPDH 265 (360)
T ss_dssp EEEETCTTSHHHHHHHHHCTTCE-EEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEEEEEEESCGGGSCHH
T ss_pred EEEeCCcCcHHHHHHHHhCCCCE-EEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCCCccEEEEcccccCCCHH
Confidence 99999999999999999999999 9999998888877642 4899999999987777 5999999999999999
Q ss_pred HHHHHHHHHHHhcCCCcEEEEeccc-cCCCCCchhhhhhhhcccHhhhcccccCCcccce
Q 021707 236 ECKLIMENCYKALLAGGKLIACEPV-LLDDSNESQRTRALLEGDIFVMTIYRAKDDNSFY 294 (309)
Q Consensus 236 ~~~~iL~~~~~aL~pgG~l~i~e~~-~~~~~~~~~~~~~~~~~dl~ml~~~~~~g~~rt~ 294 (309)
++.++|++++++|+|||+++|.|.. .++.... .....+|+.|+. ..+|+.||.
T Consensus 266 ~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~t~ 319 (360)
T 1tw3_A 266 DAVRILTRCAEALEPGGRILIHERDDLHENSFN----EQFTELDLRMLV--FLGGALRTR 319 (360)
T ss_dssp HHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCS----HHHHHHHHHHHH--HHSCCCCBH
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCc----chhhhccHHHhh--hcCCcCCCH
Confidence 9999999999999999999999998 7665331 134578999987 356777764
No 14
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=100.00 E-value=9.2e-37 Score=283.53 Aligned_cols=265 Identities=15% Similarity=0.235 Sum_probs=220.0
Q ss_pred chhhhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhcCCCCCCh
Q 021707 4 NECRDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVTDAEGLSY 83 (309)
Q Consensus 4 ~~~~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~~~~~~~~ 83 (309)
+.+++|+|+.+ .+ |+|++|||+++ |++++.++||||+|++.|++++. ++.|++|+.++.++..++|.++
T Consensus 43 ~a~~lgif~~l-~~-~~t~~elA~~~----~~~~~~l~rlLr~L~~~gll~~~-----~~~y~~t~~s~~~l~~~~~~~~ 111 (352)
T 3mcz_A 43 YAVADKLFDLT-QT-GRTPAEVAASF----GMVEGKAAILLHALAALGLLTKE-----GDAFRNTALTERYLTTTSADYI 111 (352)
T ss_dssp HHHHTTHHHHT-TS-CBCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEE-----TTEEEECHHHHHHHSTTCTTCC
T ss_pred HHHHCChHHHh-CC-CCCHHHHHHHh----CcChHHHHHHHHHHHHCCCeEec-----CCeeecCHHHHhhccCCChhhH
Confidence 46789999977 44 99999999999 99999999999999999999998 4689999999876666678888
Q ss_pred HHHHHHhcchhhhhhhhhHHHHhcCCCCChhhhhhCCChhhhhhcCchHHHHHHHHhhcCCcccHHHHHhhcCCCCC-cc
Q 021707 84 APYVLQHHQDAFMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKMPEMNGLMRRAISGVSVPFMTSVLDSYNGFKG-VK 162 (309)
Q Consensus 84 ~~~i~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~-~~ 162 (309)
+.++.+. ...++.|.+|++++++|.+.+|+.. .+++.+|+..+.|.++|...... ...+++.++ +.+ ..
T Consensus 112 ~~~~~~~--~~~~~~~~~l~~~l~~g~~~~f~~~------~~~~~~~~~~~~f~~~m~~~~~~-~~~~l~~~~-~~~~~~ 181 (352)
T 3mcz_A 112 GPIVEHQ--YLQWDNWPRLGEILRSEKPLAFQQE------SRFAHDTRARDAFNDAMVRLSQP-MVDVVSELG-VFARAR 181 (352)
T ss_dssp HHHHHHH--HTTTTTGGGHHHHHTCSSCCTTSHH------HHTTTCHHHHHHHHHHHHHHHHH-HHHHHHTCG-GGTTCC
T ss_pred HHHHHHh--HHHHHHHHHHHHHHhCCCCCCcccc------cccccCHHHHHHHHHHHHhhhhh-HHHHHHhCC-CcCCCC
Confidence 8877654 3467899999999999875444322 23456888999999999873222 236888887 777 88
Q ss_pred eEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCCC-------CCceEEeCCCCCC---CCC-Cceeeehhhhhc
Q 021707 163 RLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPSI-------PGVTHIGGDMFNS---IPA-ANAIFMKWVLAT 231 (309)
Q Consensus 163 ~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~~-------~ri~~~~~d~~~~---~p~-~D~i~~~~vlh~ 231 (309)
+|||||||+|.++..+++++|+.+ ++++|+|.+++.+++. +|++++.+|+++. .|. +|+|++++++|+
T Consensus 182 ~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vlh~ 260 (352)
T 3mcz_A 182 TVIDLAGGHGTYLAQVLRRHPQLT-GQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCLHY 260 (352)
T ss_dssp EEEEETCTTCHHHHHHHHHCTTCE-EEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCGGG
T ss_pred EEEEeCCCcCHHHHHHHHhCCCCe-EEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccccc
Confidence 999999999999999999999999 9999998888776542 5899999999986 444 499999999999
Q ss_pred CChhHHHHHHHHHHHhcCCCcEEEEeccccCCCCCchhhhhhhhcccHhhhcccccCCcccce
Q 021707 232 WTDDECKLIMENCYKALLAGGKLIACEPVLLDDSNESQRTRALLEGDIFVMTIYRAKDDNSFY 294 (309)
Q Consensus 232 ~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~~~~~~~~~~~~~~dl~ml~~~~~~g~~rt~ 294 (309)
|+++++.++|++++++|+|||+++|.|.+.++++... .....+|+.|+. ...+|++||.
T Consensus 261 ~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~t~ 319 (352)
T 3mcz_A 261 FDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTP---ALSADFSLHMMV-NTNHGELHPT 319 (352)
T ss_dssp SCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSS---HHHHHHHHHHHH-HSTTCCCCCH
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCC---chHHHhhHHHHh-hCCCCCcCCH
Confidence 9999999999999999999999999999998875422 235689999998 3457888875
No 15
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=100.00 E-value=5.3e-36 Score=276.17 Aligned_cols=267 Identities=12% Similarity=0.069 Sum_probs=226.2
Q ss_pred chhhhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhc-hhhhcCCCCCC
Q 021707 4 NECRDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIG-KSLVTDAEGLS 82 (309)
Q Consensus 4 ~~~~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~-~~l~~~~~~~~ 82 (309)
+.+++|+|+.+- ++|.|++|||+++ |++++.++|||++|++.|++++. ++.|++|+.+ ..+..+ ++.+
T Consensus 25 ~~~~l~i~~~l~-~~~~t~~ela~~~----~~~~~~l~r~L~~L~~~g~l~~~-----~~~y~~t~~~~~~l~~~-~~~~ 93 (335)
T 2r3s_A 25 AAVELNVFTAIS-QGIESSQSLAQKC----QTSERGMRMLCDYLVIIGFMTKQ-----AEGYRLTSDSAMFLDRQ-SKFY 93 (335)
T ss_dssp HHHHTTHHHHHT-TSEECHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEE-----TTEEEECHHHHHHTCTT-STTC
T ss_pred HHHHcChHHHHh-cCCCCHHHHHHHh----CCCchHHHHHHHHHHhcCCeEec-----CCEEecCHHHHHHhccC-CcHH
Confidence 357899999774 5899999999999 99999999999999999999875 6899999999 455554 5778
Q ss_pred hHHHHHHhcchhhhhhhhhHHHHhcCCCCChhhhhhCCChhhhhhcCchHHHHHHHHhhcCCcccHHHHHhhcCCC--CC
Q 021707 83 YAPYVLQHHQDAFMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKMPEMNGLMRRAISGVSVPFMTSVLDSYNGF--KG 160 (309)
Q Consensus 83 ~~~~i~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~--~~ 160 (309)
+++++.+..++..++.|.+|+++++++. ++|+ + |+++.++++..+.|.+.|..........+++.++ + .+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 165 (335)
T 2r3s_A 94 VGDAIEFLLSPMITNGFNDLTAAVLKGG-TAIS-----S-EGTLSPEHPVWVQFAKAMSPMMANPAQLIAQLVN-ENKIE 165 (335)
T ss_dssp CGGGHHHHTCHHHHGGGTTHHHHHHHTS-CCST-----T-TGGGSTTCTHHHHHHHHSGGGGHHHHHHHHHHHT-C--CC
T ss_pred HHHHHHHhcchhhHHHHHhHHHHHhcCC-CCCC-----C-cccccCCHHHHHHHHHHHHHHHhhhHHHHHHhcc-cccCC
Confidence 8888877755567789999999999887 4553 3 7777888999999999998877777778888886 7 77
Q ss_pred cceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCCC-------CCceEEeCCCCCC-CCC-Cceeeehhhhhc
Q 021707 161 VKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPSI-------PGVTHIGGDMFNS-IPA-ANAIFMKWVLAT 231 (309)
Q Consensus 161 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~~-------~ri~~~~~d~~~~-~p~-~D~i~~~~vlh~ 231 (309)
..+|||||||+|.++..+++.+|+.+ ++++|++.+++.+++. +|++++.+|+++. .|. .|+|++++++|+
T Consensus 166 ~~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~l~~ 244 (335)
T 2r3s_A 166 PLKVLDISASHGLFGIAVAQHNPNAE-IFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLVLLPNFLHH 244 (335)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTCE-EEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCEEEEEEESCGGG
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCe-EEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCCCCCCCcEEEEcchhcc
Confidence 88999999999999999999999999 9999999888877652 5799999999874 665 599999999999
Q ss_pred CChhHHHHHHHHHHHhcCCCcEEEEeccccCCCCCchhhhhhhhcccHhhhcccccCCcccce
Q 021707 232 WTDDECKLIMENCYKALLAGGKLIACEPVLLDDSNESQRTRALLEGDIFVMTIYRAKDDNSFY 294 (309)
Q Consensus 232 ~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~~~~~~~~~~~~~~dl~ml~~~~~~g~~rt~ 294 (309)
|+++++.++|++++++|+|||+++|.|...++.+... .....+|+.|+.. ..+|+.||.
T Consensus 245 ~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~t~ 303 (335)
T 2r3s_A 245 FDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITP---PDAAAFSLVMLAT-TPNGDAYTF 303 (335)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCS---HHHHHHHHHHHHH-SSSCCCCCH
T ss_pred CCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCc---hHHHHHHHHHHee-CCCCCcCCH
Confidence 9999999999999999999999999999988764321 2356789999983 346777764
No 16
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=100.00 E-value=3.7e-35 Score=273.74 Aligned_cols=237 Identities=18% Similarity=0.263 Sum_probs=206.4
Q ss_pred chhhhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhcCCCC---
Q 021707 4 NECRDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVTDAEG--- 80 (309)
Q Consensus 4 ~~~~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~~~~~--- 80 (309)
+.+++|+|+.+. ++|.|++|||+++ |++++.++|||++|++.|+|++. ++.|++|+.+..++..++|
T Consensus 50 ~a~~lgif~~L~-~~~~t~~eLA~~~----g~~~~~l~rlLr~L~~~gll~~~-----~~~y~~t~~~~~~l~~~~~~~~ 119 (359)
T 1x19_A 50 AAIELDLFSHMA-EGPKDLATLAADT----GSVPPRLEMLLETLRQMRVINLE-----DGKWSLTEFADYMFSPTPKEPN 119 (359)
T ss_dssp HHHHHTHHHHHT-TCCBCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEE-----TTEEEECHHHHHHSSSSCSBTT
T ss_pred HHHHcCcHHHHc-CCCCCHHHHHHHh----CcChHHHHHHHHHHHhCCCeEee-----CCeEecCHHHHHHhcCCCCCcc
Confidence 357899999774 5899999999999 99999999999999999999998 4699999976544444456
Q ss_pred CChHHHHHHhcchhhhhhhhhHHHHhcCCCCChhhhhhCCChhhhhhcCch---HHHHHHHHhhcCCc-ccHHHHHhhcC
Q 021707 81 LSYAPYVLQHHQDAFMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKMPE---MNGLMRRAISGVSV-PFMTSVLDSYN 156 (309)
Q Consensus 81 ~~~~~~i~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~f~~~m~~~~~-~~~~~~~~~~~ 156 (309)
.++++++.+. ....++.|.+|+++++++. + |+|+.++|+ ..+.|...|...+. ...+.+++.++
T Consensus 120 ~~~~~~~~~~-~~~~~~~~~~L~~~l~~g~-~----------~~~~~~~p~~~~~~~~f~~~m~~~~~~~~~~~l~~~~~ 187 (359)
T 1x19_A 120 LHQTPVAKAM-AFLADDFYMGLSQAVRGQK-N----------FKGQVPYPPVTREDNLYFEEIHRSNAKFAIQLLLEEAK 187 (359)
T ss_dssp BCCHHHHHHH-HHHHHHTGGGHHHHHTTSC-C----------CCCSSCSSCCSHHHHHHHHHHHHTTCHHHHHHHHHHCC
T ss_pred ccHHHHHHHH-HHHHHHHHHHHHHHHhcCC-C----------CcccccCchhhHHHHHHHHHHHHhccchhHHHHHHhcC
Confidence 6888887765 3457789999999999876 2 556667888 88999999999888 77788999987
Q ss_pred CCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCC-------CCCceEEeCCCCCC-CCCCceeeehhh
Q 021707 157 GFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPS-------IPGVTHIGGDMFNS-IPAANAIFMKWV 228 (309)
Q Consensus 157 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~-------~~ri~~~~~d~~~~-~p~~D~i~~~~v 228 (309)
+.+..+|||||||+|.++..+++++|+.+ ++++|+|.+++.+++ .+|++++.+|+++. .+.+|+|++.++
T Consensus 188 -~~~~~~vLDvG~G~G~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~v 265 (359)
T 1x19_A 188 -LDGVKKMIDVGGGIGDISAAMLKHFPELD-STILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEADAVLFCRI 265 (359)
T ss_dssp -CTTCCEEEEESCTTCHHHHHHHHHCTTCE-EEEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCCSEEEEESC
T ss_pred -CCCCCEEEEECCcccHHHHHHHHHCCCCe-EEEEecHHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCCCEEEEech
Confidence 88889999999999999999999999999 999999888887764 25799999999985 555699999999
Q ss_pred hhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 229 LATWTDDECKLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 229 lh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
+|+|+++++.++|++++++|+|||+++|.|...++.
T Consensus 266 lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~ 301 (359)
T 1x19_A 266 LYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDP 301 (359)
T ss_dssp GGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCT
T ss_pred hccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCC
Confidence 999999999999999999999999999999998775
No 17
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.70 E-value=3.5e-17 Score=145.85 Aligned_cols=107 Identities=21% Similarity=0.313 Sum_probs=93.7
Q ss_pred CCCcceEEEecCCccHHHHHHHHhc--CCCceEEEeec-hhHHhhCCC-------CCCceEEeCCCCCC-CCCCceeeeh
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKH--HFICEGINFDL-PEVVGEAPS-------IPGVTHIGGDMFNS-IPAANAIFMK 226 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~~D~-p~~~~~a~~-------~~ri~~~~~d~~~~-~p~~D~i~~~ 226 (309)
.+.+.+|||||||+|.++..+++++ |+++ ++++|. +.+++.|++ ..+|+++++|+.+. .+.+|+|++.
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~-v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~ 146 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCK-IIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLN 146 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCE-EEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCE-EEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceee
Confidence 4567899999999999999999986 5778 999998 788887764 26899999999774 5557999999
Q ss_pred hhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCCC
Q 021707 227 WVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLDDS 265 (309)
Q Consensus 227 ~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~~ 265 (309)
++||++++++..++|++++++|+|||++++.|...++++
T Consensus 147 ~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~ 185 (261)
T 4gek_A 147 FTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDA 185 (261)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSH
T ss_pred eeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCH
Confidence 999999998888999999999999999999999887763
No 18
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.64 E-value=1.7e-15 Score=141.61 Aligned_cols=219 Identities=12% Similarity=0.017 Sum_probs=144.1
Q ss_pred hhhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhcCCCCCChHH
Q 021707 6 CRDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVTDAEGLSYAP 85 (309)
Q Consensus 6 ~~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~~~~~~~~~~ 85 (309)
+..+++..+ .+|.|++|||+.+ |++++.+++||+.|.+.|+++.. ++ |++|+.++.++...++....+
T Consensus 44 ~~~~ll~~L--~~~~t~~eLa~~~----g~~~~~v~~~L~~l~~~gll~~~-----~~-~~lt~~~~~~l~~~~~~~~~~ 111 (373)
T 2qm3_A 44 SVENVLSAV--LASDDIWRIVDLS----EEPLPLVVAILESLNELGYVTFE-----DG-VKLTEKGEELVAEYGIGKRYD 111 (373)
T ss_dssp HHHHHHHHH--HHCSCHHHHHHHH----TSCHHHHHHHHHHHHHTTSEECS-----SS-SEECHHHHHHHHHHTCCCCCC
T ss_pred HHHHHHHHh--cCCCCHHHHHHHh----CCChHHHHHHHHHHhhCCcEEEC-----CC-EEECHHHHHHHHhcCcccccc
Confidence 445888877 6799999999999 99999999999999999999875 34 999998765543322211111
Q ss_pred HHHH--h----cchhhhhhhhhHHHHhcCCCCChhhhhhCCChhhhhhcCchHHHHHHHHhhcCCcccHHHHHhhcCCCC
Q 021707 86 YVLQ--H----HQDAFMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKMPEMNGLMRRAISGVSVPFMTSVLDSYNGFK 159 (309)
Q Consensus 86 ~i~~--~----~~~~~~~~~~~L~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~ 159 (309)
.+.. . ....+...|..+.+.++... .+. ..+... .+........... .. ... ..
T Consensus 112 ~~~~~~~g~g~~~~~~~~~~~~l~~~~~~~~-~~~-~~~~~~-------~~~~~~~~~~~l~---------~~-~~~-~~ 171 (373)
T 2qm3_A 112 FTCPHCQGKTVDLQAFADLLEQFREIVKDRP-EPL-HEFDQA-------YVTPETTVARVIL---------MH-TRG-DL 171 (373)
T ss_dssp ------------CGGGHHHHHHHHHHHTTCC-CCC-GGGTCC-------CBCHHHHHHHHHH---------HH-HTT-CS
T ss_pred ccchhhcCCCcchhhhHHHHHHHHHHHhcCC-ccc-hhcCCe-------ecCHHHHHHHHHH---------Hh-hcC-CC
Confidence 1100 0 00111234556666666433 111 111110 0111111111110 01 111 22
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCCCCC-----Cceeeehh
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNSIPA-----ANAIFMKW 227 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~~p~-----~D~i~~~~ 227 (309)
.+.+|||+| |+|.++..+++..|+.+ ++++|+ +.+++.++++ ++++++.+|+.+.+|. .|+|++..
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~-v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKR-IAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSE-EEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 457999999 99999999999988888 999999 7888887653 3899999999885442 49999987
Q ss_pred hhhcCChhHHHHHHHHHHHhcCCCcEEEEecccc
Q 021707 228 VLATWTDDECKLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 228 vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
.+|.. ...++|++++++|+|||++++++...
T Consensus 250 p~~~~---~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 250 PETLE---AIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp CSSHH---HHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred CCchH---HHHHHHHHHHHHcccCCeEEEEEEec
Confidence 66543 24789999999999999776666654
No 19
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.61 E-value=2.2e-15 Score=130.97 Aligned_cols=115 Identities=14% Similarity=0.118 Sum_probs=96.4
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC----CCCceEEeCCCCCC-CCC-Cc
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS----IPGVTHIGGDMFNS-IPA-AN 221 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~----~~ri~~~~~d~~~~-~p~-~D 221 (309)
+.+++.+....+..+|||||||+|.++..+++.+|+.+ ++++|. +.+++.+++ ..+++++.+|+.+. .+. .|
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD 111 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEAT-FTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYD 111 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCE-EEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCe-EEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCce
Confidence 34444443234568999999999999999999999999 999999 777776654 35899999999875 444 49
Q ss_pred eeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 222 AIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 222 ~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
+|++..++|++++.+..++|++++++|+|||++++.+...++.
T Consensus 112 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 154 (234)
T 3dtn_A 112 MVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGET 154 (234)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSS
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCC
Confidence 9999999999999888889999999999999999999887765
No 20
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.55 E-value=1.5e-14 Score=129.55 Aligned_cols=102 Identities=18% Similarity=0.224 Sum_probs=89.1
Q ss_pred CcceEEEecCCc---cHHHHHHHHhcCCCceEEEeec-hhHHhhCCC----CCCceEEeCCCCCC------------C--
Q 021707 160 GVKRLVDVGGSA---GDCLRMILQKHHFICEGINFDL-PEVVGEAPS----IPGVTHIGGDMFNS------------I-- 217 (309)
Q Consensus 160 ~~~~vlDvG~G~---G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~----~~ri~~~~~d~~~~------------~-- 217 (309)
+..+|||||||+ |.++..+.+.+|+.+ ++++|+ |.+++.+++ .++++++.+|++++ +
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~-v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~ 155 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDAR-VVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDF 155 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCE-EEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCE-EEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCC
Confidence 457999999999 999888888899999 999999 888887764 37899999999762 2
Q ss_pred CCCceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccC
Q 021707 218 PAANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLL 262 (309)
Q Consensus 218 p~~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~ 262 (309)
...|+|++..+||++++++..++|++++++|+|||+|++.+...+
T Consensus 156 ~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~ 200 (274)
T 2qe6_A 156 SRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDT 200 (274)
T ss_dssp TSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCS
T ss_pred CCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCc
Confidence 235999999999999998888999999999999999999998764
No 21
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.54 E-value=2.4e-14 Score=122.52 Aligned_cols=113 Identities=19% Similarity=0.182 Sum_probs=94.0
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC--CCceEEeCCCCCCCCC--Cce
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI--PGVTHIGGDMFNSIPA--ANA 222 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~--~ri~~~~~d~~~~~p~--~D~ 222 (309)
...+++.+.......+|||||||+|.++..+++. ..+ ++++|. +.+++.+++. ++++++.+|+.+..+. .|+
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~-v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~ 110 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGYWTRHLSGL--ADR-VTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDA 110 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH--SSE-EEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEE
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc--CCe-EEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeE
Confidence 3445555543455679999999999999999998 557 999998 7777777653 6899999999876444 399
Q ss_pred eeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 223 IFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 223 i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
|++.+++|++++++..++|+++++.|+|||++++.+...+.
T Consensus 111 v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 151 (218)
T 3ou2_A 111 VFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHE 151 (218)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC
T ss_pred EEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCc
Confidence 99999999999988889999999999999999999887643
No 22
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.51 E-value=4e-14 Score=124.84 Aligned_cols=112 Identities=16% Similarity=0.287 Sum_probs=95.0
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC----CCceEEeCCCCCC-CCC--C
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI----PGVTHIGGDMFNS-IPA--A 220 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~----~ri~~~~~d~~~~-~p~--~ 220 (309)
..+++.++ .....+|||||||+|.++..+++.+ +.+ ++++|. +.+++.+++. ++++++.+|+.+. ++. .
T Consensus 45 ~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~-~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~f 121 (266)
T 3ujc_A 45 KKILSDIE-LNENSKVLDIGSGLGGGCMYINEKY-GAH-THGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNF 121 (266)
T ss_dssp HHHTTTCC-CCTTCEEEEETCTTSHHHHHHHHHH-CCE-EEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCE
T ss_pred HHHHHhcC-CCCCCEEEEECCCCCHHHHHHHHHc-CCE-EEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcE
Confidence 44555554 6677899999999999999999988 678 999998 6777766543 7899999999874 443 4
Q ss_pred ceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 221 NAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 221 D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
|+|++.+++|++++.+..++|++++++|+|||++++.++..+.
T Consensus 122 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 164 (266)
T 3ujc_A 122 DLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATE 164 (266)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESC
T ss_pred EEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 9999999999998888899999999999999999999987766
No 23
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.51 E-value=3.8e-14 Score=121.82 Aligned_cols=112 Identities=18% Similarity=0.277 Sum_probs=92.9
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC--CCceEEeCCCCCC-CCC-Ccee
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI--PGVTHIGGDMFNS-IPA-ANAI 223 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~--~ri~~~~~d~~~~-~p~-~D~i 223 (309)
..+++.+. .....+|||||||+|.++..+++. +.+ ++++|. +.+++.+++. .+++++.+|+.+. .++ .|+|
T Consensus 35 ~~~l~~~~-~~~~~~vLDiGcG~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~fD~v 110 (220)
T 3hnr_A 35 EDILEDVV-NKSFGNVLEFGVGTGNLTNKLLLA--GRT-VYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVPTSIDTI 110 (220)
T ss_dssp HHHHHHHH-HTCCSEEEEECCTTSHHHHHHHHT--TCE-EEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCCSCCSEE
T ss_pred HHHHHHhh-ccCCCeEEEeCCCCCHHHHHHHhC--CCe-EEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCCCCeEEE
Confidence 34555554 445679999999999999999988 567 999998 6777776653 4899999999874 444 4999
Q ss_pred eehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 224 FMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 224 ~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
++.+++|++++.+...+|+++++.|+|||++++.++..+..
T Consensus 111 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 151 (220)
T 3hnr_A 111 VSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQ 151 (220)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSH
T ss_pred EECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccCh
Confidence 99999999999987789999999999999999998776553
No 24
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.50 E-value=2.2e-14 Score=123.70 Aligned_cols=100 Identities=14% Similarity=0.169 Sum_probs=85.5
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-----CCceEEeCCCCCC-CCC--Cceeeehhhhh
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-----PGVTHIGGDMFNS-IPA--ANAIFMKWVLA 230 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-----~ri~~~~~d~~~~-~p~--~D~i~~~~vlh 230 (309)
...+|||||||+|.++..+++.++ + ++++|. +.+++.++++ .+++++.+|+.+. .+. .|+|++..++|
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~--~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~ 114 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF--E-VVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIV 114 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC--E-EEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGG
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC--E-EEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchH
Confidence 367999999999999999999987 6 999998 7777776543 7899999999874 443 49999999988
Q ss_pred cCChhHHHHHHHHHHHhcCCCcEEEEeccccC
Q 021707 231 TWTDDECKLIMENCYKALLAGGKLIACEPVLL 262 (309)
Q Consensus 231 ~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~ 262 (309)
.+...+..++|+++++.|+|||++++.++..+
T Consensus 115 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 146 (227)
T 1ve3_A 115 HFEPLELNQVFKEVRRVLKPSGKFIMYFTDLR 146 (227)
T ss_dssp GCCHHHHHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEecChH
Confidence 88877788999999999999999999987543
No 25
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.49 E-value=4.4e-14 Score=124.83 Aligned_cols=113 Identities=15% Similarity=0.271 Sum_probs=93.3
Q ss_pred ccHHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCC-C
Q 021707 146 PFMTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNS-I 217 (309)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~-~ 217 (309)
.....+++.++ .....+|||||||+|.++..+++.++ + ++++|+ +.+++.+++. ++++++.+|+.+. +
T Consensus 24 ~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~--~-v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~ 99 (260)
T 1vl5_A 24 SDLAKLMQIAA-LKGNEEVLDVATGGGHVANAFAPFVK--K-VVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPF 99 (260)
T ss_dssp CCHHHHHHHHT-CCSCCEEEEETCTTCHHHHHHGGGSS--E-EEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCS
T ss_pred HHHHHHHHHhC-CCCCCEEEEEeCCCCHHHHHHHHhCC--E-EEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCC
Confidence 34566777775 66778999999999999999999876 6 999998 7787776542 6799999999773 5
Q ss_pred CC--CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 218 PA--ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 218 p~--~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
+. .|+|++..++|++++. .++|++++++|+|||++++.+...++.
T Consensus 100 ~~~~fD~V~~~~~l~~~~d~--~~~l~~~~r~LkpgG~l~~~~~~~~~~ 146 (260)
T 1vl5_A 100 TDERFHIVTCRIAAHHFPNP--ASFVSEAYRVLKKGGQLLLVDNSAPEN 146 (260)
T ss_dssp CTTCEEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEEEBCSS
T ss_pred CCCCEEEEEEhhhhHhcCCH--HHHHHHHHHHcCCCCEEEEEEcCCCCC
Confidence 53 3999999999999877 489999999999999999998876654
No 26
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.48 E-value=6e-14 Score=119.95 Aligned_cols=107 Identities=11% Similarity=0.043 Sum_probs=85.7
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC------------------CCCceEEe
Q 021707 150 SVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS------------------IPGVTHIG 210 (309)
Q Consensus 150 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~------------------~~ri~~~~ 210 (309)
.+++.+. .....+|||+|||+|..+..+++. +.+ ++++|+ +.+++.+++ ..+++++.
T Consensus 13 ~~~~~l~-~~~~~~vLD~GCG~G~~~~~la~~--g~~-V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 88 (203)
T 1pjz_A 13 QYWSSLN-VVPGARVLVPLCGKSQDMSWLSGQ--GYH-VVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWC 88 (203)
T ss_dssp HHHHHHC-CCTTCEEEETTTCCSHHHHHHHHH--CCE-EEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEE
T ss_pred HHHHhcc-cCCCCEEEEeCCCCcHhHHHHHHC--CCe-EEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEE
Confidence 3444443 556789999999999999999987 457 999998 678877653 25899999
Q ss_pred CCCCCC-CC--C-CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 211 GDMFNS-IP--A-ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 211 ~d~~~~-~p--~-~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
+|+++. .+ + .|+|+.+.++|++++++..+++++++++|+|||++++....
T Consensus 89 ~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~ 142 (203)
T 1pjz_A 89 GDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLE 142 (203)
T ss_dssp ECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEES
T ss_pred CccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEe
Confidence 999875 22 2 49999999999999888889999999999999994444333
No 27
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.47 E-value=8.2e-14 Score=123.66 Aligned_cols=98 Identities=13% Similarity=0.072 Sum_probs=84.2
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCCCCceEEeCCCCCC-CCC--CceeeehhhhhcCChh
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSIPGVTHIGGDMFNS-IPA--ANAIFMKWVLATWTDD 235 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~~ri~~~~~d~~~~-~p~--~D~i~~~~vlh~~~d~ 235 (309)
...+|||||||+|.++..|++.+. + ++++|. +.+++.+++.++|+++.+|+.+. +|. .|+|++..++|.++.+
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~~--~-v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~~~ 115 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFFE--R-VHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWFDLD 115 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTCS--E-EEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCCTTCCHH
T ss_pred CCCCEEEEcCCCCHHHHHHHHhCC--E-EEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeehhHhhHH
Confidence 456899999999999999998864 5 999998 78999999999999999999764 555 3999999999887643
Q ss_pred HHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 236 ECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 236 ~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
+.+++++++|||||+|++.....+.
T Consensus 116 ---~~~~e~~rvLkpgG~l~~~~~~~~~ 140 (257)
T 4hg2_A 116 ---RFWAELRRVARPGAVFAAVTYGLTR 140 (257)
T ss_dssp ---HHHHHHHHHEEEEEEEEEEEECCCB
T ss_pred ---HHHHHHHHHcCCCCEEEEEECCCCC
Confidence 7899999999999999998765544
No 28
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.46 E-value=1.7e-13 Score=119.62 Aligned_cols=106 Identities=16% Similarity=0.325 Sum_probs=87.4
Q ss_pred HHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCCCCceEEeCCCCC---CCCC--Cceee
Q 021707 151 VLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSIPGVTHIGGDMFN---SIPA--ANAIF 224 (309)
Q Consensus 151 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~~ri~~~~~d~~~---~~p~--~D~i~ 224 (309)
+...++.+.+..+|||||||+|.++..+++. +.+ ++++|+ +.+++.+++. ++++.+|+.+ +++. .|+|+
T Consensus 32 ~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~-v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i~ 106 (240)
T 3dli_A 32 LRRYIPYFKGCRRVLDIGCGRGEFLELCKEE--GIE-SIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGVM 106 (240)
T ss_dssp HGGGGGGTTTCSCEEEETCTTTHHHHHHHHH--TCC-EEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEEE
T ss_pred HHHHHhhhcCCCeEEEEeCCCCHHHHHHHhC--CCc-EEEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeEEE
Confidence 3333332455689999999999999999987 557 999998 7788877755 9999999865 4443 49999
Q ss_pred ehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecccc
Q 021707 225 MKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 225 ~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
+.+++|++++++..++|+++++.|+|||++++..+..
T Consensus 107 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 143 (240)
T 3dli_A 107 ISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNP 143 (240)
T ss_dssp EESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECT
T ss_pred ECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence 9999999998888899999999999999999987653
No 29
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.46 E-value=1e-13 Score=119.08 Aligned_cols=100 Identities=13% Similarity=0.134 Sum_probs=84.7
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-----------CCceEEeCCCCCC-CC--CCcee
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-----------PGVTHIGGDMFNS-IP--AANAI 223 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-----------~ri~~~~~d~~~~-~p--~~D~i 223 (309)
.+..+|||||||+|.++..+++.+|..+ ++++|. +.+++.++++ .+++++.+|+... .+ ..|+|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 106 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQ-ITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAA 106 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSE-EEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCE-EEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEE
Confidence 3457999999999999999999998888 999998 6777766542 2899999998543 22 25999
Q ss_pred eehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecc
Q 021707 224 FMKWVLATWTDDECKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 224 ~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
++..++|++++++..++|+++++.|+|||.+++...
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 107 TVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred eeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 999999999998889999999999999997777654
No 30
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.45 E-value=1.1e-13 Score=121.55 Aligned_cols=112 Identities=21% Similarity=0.298 Sum_probs=91.8
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC----CCceEEeCCCCCC-CCC--C
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI----PGVTHIGGDMFNS-IPA--A 220 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~----~ri~~~~~d~~~~-~p~--~ 220 (309)
..+++.++ .....+|||||||+|.++..+++.. ..+ ++++|. +.+++.+++. .+++++.+|+.+. ++. .
T Consensus 83 ~~~l~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~-~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~f 159 (254)
T 1xtp_A 83 RNFIASLP-GHGTSRALDCGAGIGRITKNLLTKL-YAT-TDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTY 159 (254)
T ss_dssp HHHHHTST-TCCCSEEEEETCTTTHHHHHTHHHH-CSE-EEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCE
T ss_pred HHHHHhhc-ccCCCEEEEECCCcCHHHHHHHHhh-cCE-EEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCe
Confidence 45566664 5567899999999999999999887 456 999998 6777766542 6799999998764 443 4
Q ss_pred ceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 221 NAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 221 D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
|+|++.+++|++++++..++|++++++|+|||++++.+.....
T Consensus 160 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 202 (254)
T 1xtp_A 160 DLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTG 202 (254)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--
T ss_pred EEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCc
Confidence 9999999999999888899999999999999999999975543
No 31
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.45 E-value=1.5e-13 Score=120.85 Aligned_cols=113 Identities=18% Similarity=0.131 Sum_probs=93.0
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCC-CC
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNS-IP 218 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~-~p 218 (309)
...+++.++ .....+|||||||+|.++..+++.+ +.+ ++++|. +.+++.+++. ++++++.+|+.+. .+
T Consensus 25 ~~~l~~~~~-~~~~~~VLDiGcG~G~~~~~la~~~-~~~-v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 101 (256)
T 1nkv_A 25 YATLGRVLR-MKPGTRILDLGSGSGEMLCTWARDH-GIT-GTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVAN 101 (256)
T ss_dssp HHHHHHHTC-CCTTCEEEEETCTTCHHHHHHHHHT-CCE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCS
T ss_pred HHHHHHhcC-CCCCCEEEEECCCCCHHHHHHHHhc-CCe-EEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcC
Confidence 345566664 6677899999999999999999987 667 999998 7777776542 5899999999775 32
Q ss_pred C-CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCCC
Q 021707 219 A-ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLDDS 265 (309)
Q Consensus 219 ~-~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~~ 265 (309)
+ .|+|++..++|++++. .++|++++++|+|||++++.++.....+
T Consensus 102 ~~fD~V~~~~~~~~~~~~--~~~l~~~~r~LkpgG~l~~~~~~~~~~~ 147 (256)
T 1nkv_A 102 EKCDVAACVGATWIAGGF--AGAEELLAQSLKPGGIMLIGEPYWRQLP 147 (256)
T ss_dssp SCEEEEEEESCGGGTSSS--HHHHHHHTTSEEEEEEEEEEEEEETTCC
T ss_pred CCCCEEEECCChHhcCCH--HHHHHHHHHHcCCCeEEEEecCcccCCC
Confidence 3 4999999999999865 5899999999999999999998766543
No 32
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.44 E-value=8.6e-14 Score=118.89 Aligned_cols=109 Identities=17% Similarity=0.232 Sum_probs=88.6
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCC-CCC
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNS-IPA 219 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~-~p~ 219 (309)
..+++.++ .... +|||||||+|.++..+++. |+.+ ++++|. +.+++.+++. ++++++.+|+.+. ++.
T Consensus 34 ~~~~~~~~-~~~~-~vLdiG~G~G~~~~~l~~~-~~~~-v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (219)
T 3dlc_A 34 ENIINRFG-ITAG-TCIDIGSGPGALSIALAKQ-SDFS-IRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIED 109 (219)
T ss_dssp HHHHHHHC-CCEE-EEEEETCTTSHHHHHHHHH-SEEE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCT
T ss_pred HHHHHhcC-CCCC-EEEEECCCCCHHHHHHHHc-CCCe-EEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCc
Confidence 44455554 4444 9999999999999999998 7888 999998 7777776542 5899999999874 443
Q ss_pred --CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 220 --ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 220 --~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
.|+|++.+++|++++. .++|+++++.|+|||++++.+...+.
T Consensus 110 ~~~D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~~~~~~~~~ 153 (219)
T 3dlc_A 110 NYADLIVSRGSVFFWEDV--ATAFREIYRILKSGGKTYIGGGFGNK 153 (219)
T ss_dssp TCEEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEECCSSH
T ss_pred ccccEEEECchHhhccCH--HHHHHHHHHhCCCCCEEEEEeccCcH
Confidence 4999999999999765 58999999999999999998765443
No 33
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.44 E-value=1.5e-13 Score=118.10 Aligned_cols=99 Identities=12% Similarity=0.184 Sum_probs=83.9
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-----------CCceEEeCCCCCC-CC--CCcee
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-----------PGVTHIGGDMFNS-IP--AANAI 223 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-----------~ri~~~~~d~~~~-~p--~~D~i 223 (309)
.+..+|||||||+|.++..+++.+|..+ ++++|. +.+++.++++ ++++++.+|+... .+ ..|+|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V 106 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQ-ITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAA 106 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCE-EEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCE-EEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEE
Confidence 3457999999999999999999999888 999998 7777777642 2899999999553 22 24999
Q ss_pred eehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEec
Q 021707 224 FMKWVLATWTDDECKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 224 ~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e 258 (309)
++..++|++++++..++|+++++.|+|||.+++..
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 107 TVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred EEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 99999999999888899999999999999666554
No 34
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.44 E-value=2e-13 Score=119.43 Aligned_cols=103 Identities=16% Similarity=0.066 Sum_probs=87.7
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC---CCCceEEeCCCCCC-CCC-------Cceeee
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS---IPGVTHIGGDMFNS-IPA-------ANAIFM 225 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~---~~ri~~~~~d~~~~-~p~-------~D~i~~ 225 (309)
.....+|||||||+|.++..+++.++ + ++++|. +.+++.+++ ..+++++.+|+.+. .+. .|+|++
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~--~-v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~ 130 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP--R-VIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYM 130 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS--C-EEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC--C-EEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEE
Confidence 34567999999999999999999988 6 999998 677777654 35899999999874 211 589999
Q ss_pred hhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 226 KWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 226 ~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
..++|++++++..++|++++++|+|||+++|.+...++
T Consensus 131 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 168 (245)
T 3ggd_A 131 RTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGC 168 (245)
T ss_dssp ESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTH
T ss_pred cchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccc
Confidence 99999999888899999999999999999999986543
No 35
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.43 E-value=3.2e-13 Score=121.00 Aligned_cols=111 Identities=12% Similarity=0.119 Sum_probs=92.1
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCCCCC-
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNSIPA- 219 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~~p~- 219 (309)
..+++.++ .....+|||||||+|.++..+++.++ .+ ++++|+ +.+++.+++. ++++++.+|+.+ +|+
T Consensus 54 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~-~~-v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~ 129 (287)
T 1kpg_A 54 DLALGKLG-LQPGMTLLDVGCGWGATMMRAVEKYD-VN-VVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ-FDEP 129 (287)
T ss_dssp HHHHTTTT-CCTTCEEEEETCTTSHHHHHHHHHHC-CE-EEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG-CCCC
T ss_pred HHHHHHcC-CCCcCEEEEECCcccHHHHHHHHHcC-CE-EEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh-CCCC
Confidence 44566664 66778999999999999999998775 47 999998 6677666542 589999999854 444
Q ss_pred CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 220 ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 220 ~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
.|+|++..++|++++++..++|+++++.|+|||++++.+...+.
T Consensus 130 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 173 (287)
T 1kpg_A 130 VDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLH 173 (287)
T ss_dssp CSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECC
T ss_pred eeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCC
Confidence 59999999999998777789999999999999999999987654
No 36
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.43 E-value=3.9e-13 Score=121.56 Aligned_cols=112 Identities=13% Similarity=0.174 Sum_probs=94.3
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCCCCC-
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNSIPA- 219 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~~p~- 219 (309)
..+++.++ .....+|||||||+|.++..+++.++ .+ ++++|+ +.+++.++++ ++++++.+|+.+. +.
T Consensus 62 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~-~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~ 137 (302)
T 3hem_A 62 KLALDKLN-LEPGMTLLDIGCGWGSTMRHAVAEYD-VN-VIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-DEP 137 (302)
T ss_dssp HHHHHTTC-CCTTCEEEEETCTTSHHHHHHHHHHC-CE-EEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-CCC
T ss_pred HHHHHHcC-CCCcCEEEEeeccCcHHHHHHHHhCC-CE-EEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-CCC
Confidence 45666665 67778999999999999999999987 78 999999 6777776542 4899999999765 44
Q ss_pred CceeeehhhhhcCCh-------hHHHHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 220 ANAIFMKWVLATWTD-------DECKLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 220 ~D~i~~~~vlh~~~d-------~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
.|+|++..++|++++ ++..++|+++++.|+|||++++.+...++.
T Consensus 138 fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 189 (302)
T 3hem_A 138 VDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDK 189 (302)
T ss_dssp CSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCH
T ss_pred ccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCc
Confidence 599999999999954 567899999999999999999999887654
No 37
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.43 E-value=7.6e-13 Score=117.20 Aligned_cols=109 Identities=10% Similarity=0.140 Sum_probs=92.1
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCCCCceEEeCCCCCC-CCC--Ccee
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSIPGVTHIGGDMFNS-IPA--ANAI 223 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~~ri~~~~~d~~~~-~p~--~D~i 223 (309)
...+++.++ .....+|||||||+|.++..+++ |+.+ ++++|+ +.+++.+++..+++++.+|+.+. ++. .|+|
T Consensus 23 ~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~--~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v 98 (261)
T 3ege_A 23 VNAIINLLN-LPKGSVIADIGAGTGGYSVALAN--QGLF-VYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGV 98 (261)
T ss_dssp HHHHHHHHC-CCTTCEEEEETCTTSHHHHHHHT--TTCE-EEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEE
T ss_pred HHHHHHHhC-CCCCCEEEEEcCcccHHHHHHHh--CCCE-EEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEE
Confidence 445666664 56778999999999999999997 6778 999999 78899888888999999999764 443 4999
Q ss_pred eehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 224 FMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 224 ~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
++.+++|++++. .++|++++++|+ ||++++.+...+.
T Consensus 99 ~~~~~l~~~~~~--~~~l~~~~~~Lk-gG~~~~~~~~~~~ 135 (261)
T 3ege_A 99 ISILAIHHFSHL--EKSFQEMQRIIR-DGTIVLLTFDIRL 135 (261)
T ss_dssp EEESCGGGCSSH--HHHHHHHHHHBC-SSCEEEEEECGGG
T ss_pred EEcchHhhccCH--HHHHHHHHHHhC-CcEEEEEEcCCch
Confidence 999999999766 589999999999 9999999876443
No 38
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.43 E-value=3.3e-13 Score=113.74 Aligned_cols=111 Identities=14% Similarity=0.082 Sum_probs=91.4
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCC-CCC-
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNS-IPA- 219 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~-~p~- 219 (309)
+.+++.++ ..+..+|||||||+|.++..+++. +.+ ++++|. +.+++.+++. ++++++.+|+.+. .+.
T Consensus 22 ~~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~ 97 (199)
T 2xvm_A 22 SEVLEAVK-VVKPGKTLDLGCGNGRNSLYLAAN--GYD-VDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQ 97 (199)
T ss_dssp HHHHHHTT-TSCSCEEEEETCTTSHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCC
T ss_pred HHHHHHhh-ccCCCeEEEEcCCCCHHHHHHHHC--CCe-EEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCC
Confidence 44566664 556679999999999999999987 567 999998 6777776542 4799999998764 333
Q ss_pred CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 220 ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 220 ~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
.|+|++..++|++++++..++|+++++.|+|||++++.+...++
T Consensus 98 ~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 141 (199)
T 2xvm_A 98 YDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTA 141 (199)
T ss_dssp EEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCS
T ss_pred ceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccC
Confidence 49999999999999888889999999999999999998876544
No 39
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.43 E-value=4.2e-13 Score=122.04 Aligned_cols=112 Identities=13% Similarity=0.054 Sum_probs=92.2
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCC-CC
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNS-IP 218 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~-~p 218 (309)
...+++.++.+....+|||||||+|.++..+++.+ +.+ ++++|. +.+++.++++ ++++++.+|+.+. ++
T Consensus 105 ~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 182 (312)
T 3vc1_A 105 AEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF-GSR-VEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFD 182 (312)
T ss_dssp HHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH-CCE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC
T ss_pred HHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc-CCE-EEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCC
Confidence 34566666435667899999999999999999986 577 999998 7777776542 5899999999874 44
Q ss_pred C--CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 219 A--ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 219 ~--~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
. .|+|++..++|+++ ..++|++++++|+|||++++.+....+.
T Consensus 183 ~~~fD~V~~~~~l~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 227 (312)
T 3vc1_A 183 KGAVTASWNNESTMYVD---LHDLFSEHSRFLKVGGRYVTITGCWNPR 227 (312)
T ss_dssp TTCEEEEEEESCGGGSC---HHHHHHHHHHHEEEEEEEEEEEEEECTT
T ss_pred CCCEeEEEECCchhhCC---HHHHHHHHHHHcCCCcEEEEEEcccccc
Confidence 3 49999999999994 5799999999999999999999877664
No 40
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.42 E-value=3.6e-13 Score=115.57 Aligned_cols=113 Identities=18% Similarity=0.146 Sum_probs=95.1
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhc-CCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCC-CC
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKH-HFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNS-IP 218 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~-~p 218 (309)
...+++.++ .....+|||||||+|.++..+++.+ |..+ ++++|. +.+++.+++. ++++++.+|+.+. ++
T Consensus 26 ~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~ 103 (219)
T 3dh0_A 26 PEKVLKEFG-LKEGMTVLDVGTGAGFYLPYLSKMVGEKGK-VYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLP 103 (219)
T ss_dssp HHHHHHHHT-CCTTCEEEESSCTTCTTHHHHHHHHTTTCE-EEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSC
T ss_pred HHHHHHHhC-CCCCCEEEEEecCCCHHHHHHHHHhCCCcE-EEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCC
Confidence 355667765 6777899999999999999999997 7888 999998 7777777542 5899999999764 44
Q ss_pred C--CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 219 A--ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 219 ~--~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
. .|+|++..++|++++. ..+|+++++.|+|||++++.+......
T Consensus 104 ~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~ 149 (219)
T 3dh0_A 104 DNTVDFIFMAFTFHELSEP--LKFLEELKRVAKPFAYLAIIDWKKEER 149 (219)
T ss_dssp SSCEEEEEEESCGGGCSSH--HHHHHHHHHHEEEEEEEEEEEECSSCC
T ss_pred CCCeeEEEeehhhhhcCCH--HHHHHHHHHHhCCCeEEEEEEeccccc
Confidence 4 4999999999999865 589999999999999999998776654
No 41
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.42 E-value=2.6e-13 Score=118.53 Aligned_cols=111 Identities=17% Similarity=0.264 Sum_probs=92.5
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCC-CCC
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNS-IPA 219 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~-~p~ 219 (309)
...+++.++ .....+|||||||+|.++..+++.++ + ++++|. +.+++.+++. ++++++.+|+.+. ++.
T Consensus 10 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~--~-v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 85 (239)
T 1xxl_A 10 LGLMIKTAE-CRAEHRVLDIGAGAGHTALAFSPYVQ--E-CIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPD 85 (239)
T ss_dssp HHHHHHHHT-CCTTCEEEEESCTTSHHHHHHGGGSS--E-EEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCT
T ss_pred cchHHHHhC-cCCCCEEEEEccCcCHHHHHHHHhCC--E-EEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCC
Confidence 455667775 77788999999999999999999875 6 999998 6777776542 6899999999763 443
Q ss_pred --CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 220 --ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 220 --~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
.|+|++.+++|++++. .++|++++++|+|||++++.+...++.
T Consensus 86 ~~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~ 130 (239)
T 1xxl_A 86 DSFDIITCRYAAHHFSDV--RKAVREVARVLKQDGRFLLVDHYAPED 130 (239)
T ss_dssp TCEEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEECBCSS
T ss_pred CcEEEEEECCchhhccCH--HHHHHHHHHHcCCCcEEEEEEcCCCCC
Confidence 4999999999999876 589999999999999999999887654
No 42
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.42 E-value=5e-13 Score=121.62 Aligned_cols=111 Identities=14% Similarity=0.217 Sum_probs=93.3
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCCCCC-
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNSIPA- 219 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~~p~- 219 (309)
..+++.++ .....+|||||||+|.++..+++.+ +.+ ++++|+ +.+++.+++. ++++++.+|+.+ .|.
T Consensus 80 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~-~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~ 155 (318)
T 2fk8_A 80 DLNLDKLD-LKPGMTLLDIGCGWGTTMRRAVERF-DVN-VIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWED-FAEP 155 (318)
T ss_dssp HHHHTTSC-CCTTCEEEEESCTTSHHHHHHHHHH-CCE-EEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGG-CCCC
T ss_pred HHHHHhcC-CCCcCEEEEEcccchHHHHHHHHHC-CCE-EEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHH-CCCC
Confidence 45566664 6677899999999999999999987 567 999998 6777766542 579999999855 344
Q ss_pred CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 220 ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 220 ~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
.|+|++..++|++++++..++|+++++.|+|||++++.++..+.
T Consensus 156 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 156 VDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp CSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred cCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 59999999999998877889999999999999999999988765
No 43
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.42 E-value=2.7e-13 Score=121.70 Aligned_cols=108 Identities=16% Similarity=0.167 Sum_probs=89.4
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCC-CceEEEeec-hhHHhhCCCC-----CCceEEeCCCCCC-CCC-C
Q 021707 150 SVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHF-ICEGINFDL-PEVVGEAPSI-----PGVTHIGGDMFNS-IPA-A 220 (309)
Q Consensus 150 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~~D~-p~~~~~a~~~-----~ri~~~~~d~~~~-~p~-~ 220 (309)
.+++.+....+..+|||||||+|.++..+++.+|. .+ ++++|+ +.+++.+++. .+++++.+|+.+. .++ .
T Consensus 12 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~f 90 (284)
T 3gu3_A 12 FLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSK-YTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKY 90 (284)
T ss_dssp HHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCE-EEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSSCE
T ss_pred HHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcCCCe
Confidence 34444423556789999999999999999999995 78 999998 6677666542 4899999999874 444 4
Q ss_pred ceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 221 NAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 221 D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
|+|++..++|++++. .++|+++++.|+|||++++.++.
T Consensus 91 D~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 91 DIAICHAFLLHMTTP--ETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEEEEESCGGGCSSH--HHHHHHHHHTEEEEEEEEEEECC
T ss_pred eEEEECChhhcCCCH--HHHHHHHHHHcCCCCEEEEEecc
Confidence 999999999999877 49999999999999999999877
No 44
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.41 E-value=3.6e-13 Score=118.43 Aligned_cols=108 Identities=18% Similarity=0.247 Sum_probs=91.2
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC-CCCceEEeCCCCCCCCC--Cceee
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS-IPGVTHIGGDMFNSIPA--ANAIF 224 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~-~~ri~~~~~d~~~~~p~--~D~i~ 224 (309)
..+++.+. .....+|||||||+|.++..+++.+|..+ ++++|. +.+++.+++ .++++++.+|+.+..+. .|+|+
T Consensus 23 ~~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~-v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~ 100 (259)
T 2p35_A 23 RDLLAQVP-LERVLNGYDLGCGPGNSTELLTDRYGVNV-ITGIDSDDDMLEKAADRLPNTNFGKADLATWKPAQKADLLY 100 (259)
T ss_dssp HHHHTTCC-CSCCSSEEEETCTTTHHHHHHHHHHCTTS-EEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCSSCEEEEE
T ss_pred HHHHHhcC-CCCCCEEEEecCcCCHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHhCCCcEEEECChhhcCccCCcCEEE
Confidence 34566664 56678999999999999999999999999 999999 778877765 37899999999764333 39999
Q ss_pred ehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 225 MKWVLATWTDDECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 225 ~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
+++++|++++. .++|+++++.|+|||++++..+.
T Consensus 101 ~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 101 ANAVFQWVPDH--LAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp EESCGGGSTTH--HHHHHHHGGGEEEEEEEEEEEEC
T ss_pred EeCchhhCCCH--HHHHHHHHHhcCCCeEEEEEeCC
Confidence 99999999765 58999999999999999998754
No 45
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.41 E-value=4.6e-13 Score=118.41 Aligned_cols=102 Identities=17% Similarity=0.191 Sum_probs=85.2
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-CCceEEeCCCCCC-CCC-Cceeeehh-hhhcCC
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-PGVTHIGGDMFNS-IPA-ANAIFMKW-VLATWT 233 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-~ri~~~~~d~~~~-~p~-~D~i~~~~-vlh~~~ 233 (309)
++..+|||||||+|.++..+++.++ + ++++|+ +.+++.+++. .+++++.+|+.+. .+. .|+|++.. ++|+++
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~~--~-v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~ 125 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSFG--T-VEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAVTCMFSSIGHLA 125 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTSS--E-EEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEEEECTTGGGGSC
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcCC--e-EEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEEEEcCchhhhcC
Confidence 3567999999999999999998854 6 999999 7788877653 6899999999875 444 49999998 999997
Q ss_pred h-hHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 234 D-DECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 234 d-~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
+ ++..++|+++++.|+|||+++|.+...++
T Consensus 126 ~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 156 (263)
T 3pfg_A 126 GQAELDAALERFAAHVLPDGVVVVEPWWFPE 156 (263)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEEECCCCCTT
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEeccChh
Confidence 5 56789999999999999999997654444
No 46
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.41 E-value=2e-13 Score=118.86 Aligned_cols=98 Identities=18% Similarity=0.221 Sum_probs=82.8
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC--CCceEEeCCCCCCCCC--CceeeehhhhhcCC
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI--PGVTHIGGDMFNSIPA--ANAIFMKWVLATWT 233 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~--~ri~~~~~d~~~~~p~--~D~i~~~~vlh~~~ 233 (309)
.+..+|||||||+|.++..+++.++ + ++++|. +.+++.+++. .+++++.+|+.+..+. .|+|++.+++|+++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~--~-v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~ 117 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN--D-ITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDNIVLTHVLEHID 117 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS--C-EEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEEEEEESCGGGCS
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC--c-EEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccEEEEhhHHHhhc
Confidence 3457899999999999999999876 5 999998 6777776643 2899999999776443 39999999999998
Q ss_pred hhHHHHHHHHHH-HhcCCCcEEEEecccc
Q 021707 234 DDECKLIMENCY-KALLAGGKLIACEPVL 261 (309)
Q Consensus 234 d~~~~~iL~~~~-~aL~pgG~l~i~e~~~ 261 (309)
+. .++|++++ ++|+|||++++.++..
T Consensus 118 ~~--~~~l~~~~~~~LkpgG~l~i~~~~~ 144 (250)
T 2p7i_A 118 DP--VALLKRINDDWLAEGGRLFLVCPNA 144 (250)
T ss_dssp SH--HHHHHHHHHTTEEEEEEEEEEEECT
T ss_pred CH--HHHHHHHHHHhcCCCCEEEEEcCCh
Confidence 77 58999999 9999999999987644
No 47
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.41 E-value=2.9e-13 Score=121.81 Aligned_cols=111 Identities=14% Similarity=0.201 Sum_probs=92.1
Q ss_pred HHHHhhc----CCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCC
Q 021707 149 TSVLDSY----NGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNS 216 (309)
Q Consensus 149 ~~~~~~~----~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~ 216 (309)
..+++.+ . .....+|||||||+|.++..+++.+ +.+ ++++|+ +.+++.+++. ++++++.+|+.+.
T Consensus 68 ~~l~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 144 (297)
T 2o57_A 68 EWLASELAMTGV-LQRQAKGLDLGAGYGGAARFLVRKF-GVS-IDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI 144 (297)
T ss_dssp HHHHHHHHHTTC-CCTTCEEEEETCTTSHHHHHHHHHH-CCE-EEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC
T ss_pred HHHHHHhhhccC-CCCCCEEEEeCCCCCHHHHHHHHHh-CCE-EEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC
Confidence 4455555 4 5667899999999999999999987 457 999999 6777766542 6899999999874
Q ss_pred -CCC--CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 217 -IPA--ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 217 -~p~--~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
++. .|+|++..++|++++. .++|++++++|+|||++++.++..++.
T Consensus 145 ~~~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~ 193 (297)
T 2o57_A 145 PCEDNSYDFIWSQDAFLHSPDK--LKVFQECARVLKPRGVMAITDPMKEDG 193 (297)
T ss_dssp SSCTTCEEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEEEECTT
T ss_pred CCCCCCEeEEEecchhhhcCCH--HHHHHHHHHHcCCCeEEEEEEeccCCC
Confidence 443 3999999999999884 699999999999999999999887654
No 48
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.41 E-value=2.6e-13 Score=122.46 Aligned_cols=100 Identities=16% Similarity=0.179 Sum_probs=83.8
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC----------------------------------
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI---------------------------------- 203 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~---------------------------------- 203 (309)
....+|||||||+|.++..+++.+|..+ ++++|+ +.+++.++++
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~-v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSR-MVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKR 123 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSE-EEEEESCHHHHHHHHHTC---------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCE-EEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccc
Confidence 3568999999999999999999999999 999999 6677666432
Q ss_pred ------------------------------CCceEEeCCCCCCC------C-C-CceeeehhhhhcC----ChhHHHHHH
Q 021707 204 ------------------------------PGVTHIGGDMFNSI------P-A-ANAIFMKWVLATW----TDDECKLIM 241 (309)
Q Consensus 204 ------------------------------~ri~~~~~d~~~~~------p-~-~D~i~~~~vlh~~----~d~~~~~iL 241 (309)
.+|+++.+|+.... + . .|+|++..+++++ ++++..++|
T Consensus 124 ~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l 203 (292)
T 3g07_A 124 SCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMF 203 (292)
T ss_dssp ------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHH
Confidence 48999999998642 2 2 4999999998654 777889999
Q ss_pred HHHHHhcCCCcEEEEecc
Q 021707 242 ENCYKALLAGGKLIACEP 259 (309)
Q Consensus 242 ~~~~~aL~pgG~l~i~e~ 259 (309)
++++++|+|||+|++...
T Consensus 204 ~~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 204 RRIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHHHEEEEEEEEEECC
T ss_pred HHHHHHhCCCcEEEEecC
Confidence 999999999999988643
No 49
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.40 E-value=1.9e-13 Score=116.09 Aligned_cols=100 Identities=16% Similarity=0.053 Sum_probs=86.2
Q ss_pred cceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC-CCCceEEeCCCCCC-CCC--CceeeehhhhhcCChh
Q 021707 161 VKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS-IPGVTHIGGDMFNS-IPA--ANAIFMKWVLATWTDD 235 (309)
Q Consensus 161 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~-~~ri~~~~~d~~~~-~p~--~D~i~~~~vlh~~~d~ 235 (309)
..+|||||||+|.++..+++. +.+ ++++|. +.+++.+++ .++++++.+|+.+. .+. .|+|++.+++|+++.+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~ 118 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQ-IEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPG 118 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCC-EEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTT
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCe-EEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHH
Confidence 579999999999999999988 457 999998 778887765 47899999999764 333 4999999999999977
Q ss_pred HHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 236 ECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 236 ~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
+..++|++++++|+|||++++.+...+.
T Consensus 119 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 146 (203)
T 3h2b_A 119 ELPDALVALRMAVEDGGGLLMSFFSGPS 146 (203)
T ss_dssp THHHHHHHHHHTEEEEEEEEEEEECCSS
T ss_pred HHHHHHHHHHHHcCCCcEEEEEEccCCc
Confidence 7889999999999999999998866554
No 50
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.40 E-value=5.8e-13 Score=118.23 Aligned_cols=112 Identities=17% Similarity=0.193 Sum_probs=93.1
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC-------CCCceEEeCCCCCC-CC
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS-------IPGVTHIGGDMFNS-IP 218 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~-------~~ri~~~~~d~~~~-~p 218 (309)
...+++.++ .....+|||||||+|.++..+++.+ +.+ ++++|+ +.+++.+++ .++++++.+|+.+. ++
T Consensus 50 ~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 126 (273)
T 3bus_A 50 TDEMIALLD-VRSGDRVLDVGCGIGKPAVRLATAR-DVR-VTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFE 126 (273)
T ss_dssp HHHHHHHSC-CCTTCEEEEESCTTSHHHHHHHHHS-CCE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC
T ss_pred HHHHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHhc-CCE-EEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCC
Confidence 355667775 6677899999999999999999987 678 999998 667766653 25899999999774 44
Q ss_pred C--CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 219 A--ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 219 ~--~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
. .|+|++..++|++++. .++|+++++.|+|||++++.+.....+
T Consensus 127 ~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~ 172 (273)
T 3bus_A 127 DASFDAVWALESLHHMPDR--GRALREMARVLRPGGTVAIADFVLLAP 172 (273)
T ss_dssp TTCEEEEEEESCTTTSSCH--HHHHHHHHTTEEEEEEEEEEEEEESSC
T ss_pred CCCccEEEEechhhhCCCH--HHHHHHHHHHcCCCeEEEEEEeeccCC
Confidence 3 3999999999999876 589999999999999999999877654
No 51
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.39 E-value=4.5e-13 Score=114.48 Aligned_cols=102 Identities=19% Similarity=0.116 Sum_probs=86.1
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCCCCceEEeCCCCCCCC-C-CceeeehhhhhcCCh
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSIPGVTHIGGDMFNSIP-A-ANAIFMKWVLATWTD 234 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~~ri~~~~~d~~~~~p-~-~D~i~~~~vlh~~~d 234 (309)
+....+|||||||+|.++..+++. ..+ ++++|. +.+++.+++..+++++.+|+.+..+ + .|+|++.+++|++++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~ 117 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA--GFD-VDATDGSPELAAEASRRLGRPVRTMLFHQLDAIDAYDAVWAHACLLHVPR 117 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHTSCCEECCGGGCCCCSCEEEEEECSCGGGSCH
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc--CCe-EEEECCCHHHHHHHHHhcCCceEEeeeccCCCCCcEEEEEecCchhhcCH
Confidence 345679999999999999999987 557 999998 7788877766578889999876433 3 499999999999998
Q ss_pred hHHHHHHHHHHHhcCCCcEEEEeccccC
Q 021707 235 DECKLIMENCYKALLAGGKLIACEPVLL 262 (309)
Q Consensus 235 ~~~~~iL~~~~~aL~pgG~l~i~e~~~~ 262 (309)
++..++|+++++.|+|||++++......
T Consensus 118 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 145 (211)
T 3e23_A 118 DELADVLKLIWRALKPGGLFYASYKSGE 145 (211)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECCS
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEcCCC
Confidence 8889999999999999999999865443
No 52
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.39 E-value=6.4e-13 Score=124.13 Aligned_cols=113 Identities=13% Similarity=0.204 Sum_probs=90.2
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC---------------CCCceEEeC
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS---------------IPGVTHIGG 211 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~---------------~~ri~~~~~ 211 (309)
+..+++.+. .....+|||||||+|..+..++..++..+ ++++|+ +.+++.|++ .++|+++.+
T Consensus 162 i~~il~~l~-l~~gd~VLDLGCGtG~l~l~lA~~~g~~k-VvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~G 239 (438)
T 3uwp_A 162 VAQMIDEIK-MTDDDLFVDLGSGVGQVVLQVAAATNCKH-HYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERG 239 (438)
T ss_dssp HHHHHHHHC-CCTTCEEEEESCTTSHHHHHHHHHCCCSE-EEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEEC
T ss_pred HHHHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHHCCCCE-EEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEEC
Confidence 445666664 77788999999999999999999887767 999999 455554432 268999999
Q ss_pred CCCCC-C----CCCceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCCC
Q 021707 212 DMFNS-I----PAANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLDDS 265 (309)
Q Consensus 212 d~~~~-~----p~~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~~ 265 (309)
|+++. + +.+|+|+++++++ + ++..+.|+++++.|+|||+|++.|.+.+++.
T Consensus 240 D~~~lp~~d~~~~aDVVf~Nn~~F-~--pdl~~aL~Ei~RvLKPGGrIVssE~f~p~d~ 295 (438)
T 3uwp_A 240 DFLSEEWRERIANTSVIFVNNFAF-G--PEVDHQLKERFANMKEGGRIVSSKPFAPLNF 295 (438)
T ss_dssp CTTSHHHHHHHHTCSEEEECCTTC-C--HHHHHHHHHHHTTSCTTCEEEESSCSSCTTC
T ss_pred cccCCccccccCCccEEEEccccc-C--chHHHHHHHHHHcCCCCcEEEEeecccCCCC
Confidence 99875 3 2469999887763 3 3446788999999999999999999999865
No 53
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.38 E-value=7.4e-13 Score=116.40 Aligned_cols=110 Identities=17% Similarity=0.163 Sum_probs=88.6
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCC-CCC-
Q 021707 150 SVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNS-IPA- 219 (309)
Q Consensus 150 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~-~p~- 219 (309)
.+++.+.......+|||||||+|.++..+++.+|. + ++++|. +.+++.++++ ++++++.+|+.+. ++.
T Consensus 36 ~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 113 (257)
T 3f4k_A 36 KAVSFINELTDDAKIADIGCGTGGQTLFLADYVKG-Q-ITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNE 113 (257)
T ss_dssp HHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCS-E-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTT
T ss_pred HHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCC-e-EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCC
Confidence 34444433556679999999999999999999986 7 999998 6677766542 5699999999664 443
Q ss_pred -CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 220 -ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 220 -~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
.|+|++..++|+++ ..++|+++++.|+|||++++.++.+...
T Consensus 114 ~fD~v~~~~~l~~~~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 156 (257)
T 3f4k_A 114 ELDLIWSEGAIYNIG---FERGMNEWSKYLKKGGFIAVSEASWFTS 156 (257)
T ss_dssp CEEEEEEESCSCCCC---HHHHHHHHHTTEEEEEEEEEEEEEESSS
T ss_pred CEEEEEecChHhhcC---HHHHHHHHHHHcCCCcEEEEEEeeccCC
Confidence 49999999999993 3589999999999999999999875554
No 54
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.38 E-value=7.8e-13 Score=117.30 Aligned_cols=110 Identities=16% Similarity=0.114 Sum_probs=89.3
Q ss_pred HHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCC-CCC--
Q 021707 151 VLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNS-IPA-- 219 (309)
Q Consensus 151 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~-~p~-- 219 (309)
+++.+.......+|||||||+|.++..+++. +..+ ++++|+ +.+++.+++. ++++++.+|+.+. ++.
T Consensus 37 ~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 114 (267)
T 3kkz_A 37 ALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQ-VTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEE 114 (267)
T ss_dssp HHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-CSSE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTC
T ss_pred HHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-cCCE-EEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCC
Confidence 4444432456789999999999999999998 7888 999998 6777766542 6799999999764 343
Q ss_pred CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCCC
Q 021707 220 ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLDDS 265 (309)
Q Consensus 220 ~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~~ 265 (309)
.|+|++..++|++ +. .++|+++++.|+|||++++.+..+..+.
T Consensus 115 fD~i~~~~~~~~~-~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 157 (267)
T 3kkz_A 115 LDLIWSEGAIYNI-GF--ERGLNEWRKYLKKGGYLAVSECSWFTDE 157 (267)
T ss_dssp EEEEEESSCGGGT-CH--HHHHHHHGGGEEEEEEEEEEEEEESSSC
T ss_pred EEEEEEcCCceec-CH--HHHHHHHHHHcCCCCEEEEEEeeecCCC
Confidence 4999999999999 33 5899999999999999999998765543
No 55
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.38 E-value=5.9e-13 Score=115.78 Aligned_cols=99 Identities=16% Similarity=0.177 Sum_probs=84.4
Q ss_pred ceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCCCCC--Cceeeehhhhhc
Q 021707 162 KRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNSIPA--ANAIFMKWVLAT 231 (309)
Q Consensus 162 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~~p~--~D~i~~~~vlh~ 231 (309)
.+|||||||+|.++..+++ +..+ ++++|. +.+++.+++. .+++++.+|+.+..+. .|+|++..++|+
T Consensus 68 ~~vLDiGcG~G~~~~~l~~--~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMAS--PERF-VVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCA 144 (235)
T ss_dssp EEEEEETCTTCHHHHHHCB--TTEE-EEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTT
T ss_pred CCEEEeCCCCCHHHHHHHh--CCCe-EEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhc
Confidence 5999999999999999876 5667 999998 6777766542 4699999999886444 499999999999
Q ss_pred CChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 232 WTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 232 ~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
+++++..++|+++++.|+|||++++.+.....
T Consensus 145 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 176 (235)
T 3lcc_A 145 IEPEMRPAWAKSMYELLKPDGELITLMYPITD 176 (235)
T ss_dssp SCGGGHHHHHHHHHHHEEEEEEEEEEECCCSC
T ss_pred CCHHHHHHHHHHHHHHCCCCcEEEEEEecccc
Confidence 99888899999999999999999998876554
No 56
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.38 E-value=6e-13 Score=118.40 Aligned_cols=101 Identities=18% Similarity=0.267 Sum_probs=87.4
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCC-CCC--Cceeeehh
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNS-IPA--ANAIFMKW 227 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~-~p~--~D~i~~~~ 227 (309)
+....+|||||||+|.++..+++.+|+.+ ++++|. +.+++.+++. ++++++.+|+.+. ++. .|+|++++
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 113 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAE-ITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCF 113 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSE-EEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEES
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEec
Confidence 56678999999999999999999999999 999998 6777766542 6899999999864 433 49999999
Q ss_pred hhhcCChhHHHHHHHHHHHhcCCCcEEEEecccc
Q 021707 228 VLATWTDDECKLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 228 vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
++|++++.+ .+|+++++.|+|||++++.+...
T Consensus 114 ~l~~~~~~~--~~l~~~~~~L~pgG~l~~~~~~~ 145 (276)
T 3mgg_A 114 VLEHLQSPE--EALKSLKKVLKPGGTITVIEGDH 145 (276)
T ss_dssp CGGGCSCHH--HHHHHHHHHEEEEEEEEEEEECG
T ss_pred hhhhcCCHH--HHHHHHHHHcCCCcEEEEEEcCC
Confidence 999998874 89999999999999999998644
No 57
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.38 E-value=7.3e-13 Score=118.31 Aligned_cols=109 Identities=18% Similarity=0.161 Sum_probs=90.1
Q ss_pred cHHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-CCceEEeCCCCCC-CCC-Cce
Q 021707 147 FMTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-PGVTHIGGDMFNS-IPA-ANA 222 (309)
Q Consensus 147 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-~ri~~~~~d~~~~-~p~-~D~ 222 (309)
....+++.++ .....+|||||||+|.++..+++ +..+ ++++|. +.+++.+++. ++++++.+|+.+. .+. .|+
T Consensus 45 ~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~--~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~ 120 (279)
T 3ccf_A 45 YGEDLLQLLN-PQPGEFILDLGCGTGQLTEKIAQ--SGAE-VLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPLDA 120 (279)
T ss_dssp SCCHHHHHHC-CCTTCEEEEETCTTSHHHHHHHH--TTCE-EEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCEEE
T ss_pred HHHHHHHHhC-CCCCCEEEEecCCCCHHHHHHHh--CCCe-EEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCcCE
Confidence 3455666665 56678999999999999999998 6778 999998 7788777654 7899999999764 433 499
Q ss_pred eeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecccc
Q 021707 223 IFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 223 i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
|++.+++|++++. .++|++++++|+|||++++..+..
T Consensus 121 v~~~~~l~~~~d~--~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 121 VFSNAMLHWVKEP--EAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp EEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEECT
T ss_pred EEEcchhhhCcCH--HHHHHHHHHhcCCCcEEEEEecCC
Confidence 9999999999876 489999999999999999876543
No 58
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.37 E-value=8.4e-13 Score=113.10 Aligned_cols=99 Identities=20% Similarity=0.253 Sum_probs=83.2
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC----CCCceEEeCCCCCCCCC--Cceeeehhhhh
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS----IPGVTHIGGDMFNSIPA--ANAIFMKWVLA 230 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~----~~ri~~~~~d~~~~~p~--~D~i~~~~vlh 230 (309)
.....+|||||||+|.++..+++.+ .+ ++++|. +.+++.+++ .++++++.+|+.+..+. .|+|++.+++|
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~ 125 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC--KR-LTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVVAEVLY 125 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE--EE-EEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEEEEESCGG
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC--CE-EEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEEEEccHHH
Confidence 4567899999999999999999886 36 999998 667766653 36899999999876443 49999999999
Q ss_pred cCCh-hHHHHHHHHHHHhcCCCcEEEEecc
Q 021707 231 TWTD-DECKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 231 ~~~d-~~~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
++++ ++..++|+++++.|+|||++++..+
T Consensus 126 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 126 YLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp GSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 9996 5567899999999999999998764
No 59
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.37 E-value=9.3e-13 Score=115.68 Aligned_cols=105 Identities=17% Similarity=0.099 Sum_probs=85.9
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC---CCCceEEeCCCCCC-CCC--Cc
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS---IPGVTHIGGDMFNS-IPA--AN 221 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~---~~ri~~~~~d~~~~-~p~--~D 221 (309)
..+.+.++ .....+|||||||+|.++..+++..+. + ++++|. +.+++.+++ ..+++++.+|+.+. ++. .|
T Consensus 34 ~~l~~~~~-~~~~~~vLD~GcG~G~~~~~l~~~~~~-~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD 110 (253)
T 3g5l_A 34 HELKKMLP-DFNQKTVLDLGCGFGWHCIYAAEHGAK-K-VLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYN 110 (253)
T ss_dssp HHHHTTCC-CCTTCEEEEETCTTCHHHHHHHHTTCS-E-EEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEE
T ss_pred HHHHHhhh-ccCCCEEEEECCCCCHHHHHHHHcCCC-E-EEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeE
Confidence 34455554 446789999999999999999999765 6 999998 777777654 37899999999764 443 49
Q ss_pred eeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEec
Q 021707 222 AIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 222 ~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e 258 (309)
+|++..++|++++. .++|++++++|+|||++++..
T Consensus 111 ~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 111 VVLSSLALHYIASF--DDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp EEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEchhhhhhhhH--HHHHHHHHHHcCCCcEEEEEe
Confidence 99999999999765 699999999999999999974
No 60
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.37 E-value=1.6e-12 Score=117.26 Aligned_cols=97 Identities=20% Similarity=0.124 Sum_probs=82.5
Q ss_pred CCcceEEEecCCccHHHHHHHHhc-CCCceEEEeec-hhHHhhCCC--------CCCceEEeCCCCCC-CC-------C-
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKH-HFICEGINFDL-PEVVGEAPS--------IPGVTHIGGDMFNS-IP-------A- 219 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~~D~-p~~~~~a~~--------~~ri~~~~~d~~~~-~p-------~- 219 (309)
....+|||||||+|.++..+++.+ +..+ ++++|+ +.+++.+++ .++++++.+|+.+. .+ .
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 113 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQ-IIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQK 113 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSE-EEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCE-EEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCC
Confidence 467899999999999999999987 8888 999999 677777654 47999999999874 32 2
Q ss_pred CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecc
Q 021707 220 ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 220 ~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
.|+|++..++|++ + ..++|+++++.|+|||.+++.+.
T Consensus 114 fD~V~~~~~l~~~-~--~~~~l~~~~~~LkpgG~l~i~~~ 150 (299)
T 3g5t_A 114 IDMITAVECAHWF-D--FEKFQRSAYANLRKDGTIAIWGY 150 (299)
T ss_dssp EEEEEEESCGGGS-C--HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeEEeHhhHHHHh-C--HHHHHHHHHHhcCCCcEEEEEec
Confidence 4999999999999 4 46999999999999999999443
No 61
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.37 E-value=3.8e-13 Score=117.48 Aligned_cols=102 Identities=16% Similarity=0.253 Sum_probs=86.5
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCC-CCC--Cceeeehhhh
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNS-IPA--ANAIFMKWVL 229 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~-~p~--~D~i~~~~vl 229 (309)
+..+|||||||+|.++..+++.+ ..+ ++++|. +.+++.+++. .+++++.+|+.+. .+. .|+|++.+++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 156 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FRE-VDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVI 156 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSE-EEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCE-EEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchh
Confidence 46799999999999999999887 457 999998 7777776542 3589999998654 333 4999999999
Q ss_pred hcCChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 230 ATWTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 230 h~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
|++++++..++|+++++.|+|||++++.+...+.
T Consensus 157 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 190 (241)
T 2ex4_A 157 GHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQE 190 (241)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSS
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCC
Confidence 9999988889999999999999999999887654
No 62
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.37 E-value=1.9e-12 Score=112.28 Aligned_cols=103 Identities=17% Similarity=0.173 Sum_probs=85.9
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-CCceEEeCCCCCC-CCC-Cceeee-hhhhhcCC
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-PGVTHIGGDMFNS-IPA-ANAIFM-KWVLATWT 233 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-~ri~~~~~d~~~~-~p~-~D~i~~-~~vlh~~~ 233 (309)
.+..+|||||||+|.++..+++.++ + ++++|. +.+++.+++. ++++++.+|+.+. .+. .|+|++ ..++|+++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~-v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~~ 115 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--D-TAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAVVSMFSSVGYLK 115 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--E-EEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEEEECTTGGGGCC
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--c-EEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEEEEcCchHhhcC
Confidence 4567999999999999999999987 6 999999 7788877654 7899999999774 333 499994 55999886
Q ss_pred h-hHHHHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 234 D-DECKLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 234 d-~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
+ ++..++|+++++.|+|||++++.+...++.
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 147 (239)
T 3bxo_A 116 TTEELGAAVASFAEHLEPGGVVVVEPWWFPET 147 (239)
T ss_dssp SHHHHHHHHHHHHHTEEEEEEEEECCCCCTTT
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEeccCccc
Confidence 4 677899999999999999999987766553
No 63
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.35 E-value=1.7e-12 Score=112.94 Aligned_cols=106 Identities=19% Similarity=0.229 Sum_probs=85.5
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC---CCceEEeCCCCCC-CCC--Cc
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI---PGVTHIGGDMFNS-IPA--AN 221 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~---~ri~~~~~d~~~~-~p~--~D 221 (309)
+.+.+.++ .....+|||||||+|.++..+++... .+ ++++|. +.+++.+++. .+++++.+|+.+. .+. .|
T Consensus 33 ~~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~-~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD 109 (243)
T 3bkw_A 33 PALRAMLP-EVGGLRIVDLGCGFGWFCRWAHEHGA-SY-VLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFD 109 (243)
T ss_dssp HHHHHHSC-CCTTCEEEEETCTTCHHHHHHHHTTC-SE-EEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEE
T ss_pred HHHHHhcc-ccCCCEEEEEcCcCCHHHHHHHHCCC-Ce-EEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCce
Confidence 34555554 45668999999999999999998843 26 999998 6777776543 5799999999764 433 49
Q ss_pred eeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecc
Q 021707 222 AIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 222 ~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
+|++.+++|++++. .++|++++++|+|||++++..+
T Consensus 110 ~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 110 LAYSSLALHYVEDV--ARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp EEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEeccccccchH--HHHHHHHHHhcCcCcEEEEEeC
Confidence 99999999999865 5899999999999999999764
No 64
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.35 E-value=1.3e-12 Score=122.43 Aligned_cols=103 Identities=16% Similarity=0.165 Sum_probs=88.3
Q ss_pred CCcceEEEecCCccHHHHHHHHhc-CCCceEEEeec-hhHHhhCCCC--------------CCceEEeCCCCC-------
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKH-HFICEGINFDL-PEVVGEAPSI--------------PGVTHIGGDMFN------- 215 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~~D~-p~~~~~a~~~--------------~ri~~~~~d~~~------- 215 (309)
.+..+|||||||+|.++..+++.+ |+.+ ++++|+ +.+++.++++ ++++++.+|+.+
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~-v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGK-VIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCE-EEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 346799999999999999999997 7888 999999 7777777643 689999999986
Q ss_pred CCCC--CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 216 SIPA--ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 216 ~~p~--~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
+++. .|+|+++.++|++++. .++|++++++|+|||++++.+...+..
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~ 209 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNK--LALFKEIHRVLRDGGELYFSDVYADRR 209 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEEEESSC
T ss_pred CCCCCCEEEEEEccchhcCCCH--HHHHHHHHHHcCCCCEEEEEEeccccc
Confidence 4444 3999999999999876 599999999999999999998776643
No 65
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.35 E-value=4.9e-13 Score=121.18 Aligned_cols=106 Identities=14% Similarity=0.064 Sum_probs=87.9
Q ss_pred CCCcceEEEecCCccHHHHHHH-HhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCC-CCC-Cceeeeh
Q 021707 158 FKGVKRLVDVGGSAGDCLRMIL-QKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNS-IPA-ANAIFMK 226 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~-~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~-~p~-~D~i~~~ 226 (309)
.....+|||||||+|.++..++ ..+|+.+ ++++|. +.+++.++++ ++++++.+|+.+. .+. .|+|++.
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~ 194 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQ-LVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSN 194 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCE-EEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCe-EEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEEC
Confidence 4567899999999999999996 6788999 999999 7777776542 4699999999875 444 4999999
Q ss_pred hhhhcCChhH-HHHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 227 WVLATWTDDE-CKLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 227 ~vlh~~~d~~-~~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
.++|++++.+ ..++|+++++.|+|||++++.+...+..
T Consensus 195 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 233 (305)
T 3ocj_A 195 GLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPA 233 (305)
T ss_dssp SSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTT
T ss_pred ChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCc
Confidence 9999997554 4579999999999999999988766543
No 66
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.35 E-value=2.4e-12 Score=115.16 Aligned_cols=96 Identities=19% Similarity=0.142 Sum_probs=80.2
Q ss_pred cceEEEecCCccH----HHHHHHHhcC----CCceEEEeec-hhHHhhCCCC----------------------------
Q 021707 161 VKRLVDVGGSAGD----CLRMILQKHH----FICEGINFDL-PEVVGEAPSI---------------------------- 203 (309)
Q Consensus 161 ~~~vlDvG~G~G~----~~~~l~~~~p----~~~~~~~~D~-p~~~~~a~~~---------------------------- 203 (309)
..+|+|+|||+|. +++.+++.+| +.+ +++.|+ +.+++.|++.
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~-I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWK-VFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEE-EEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeE-EEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 4689999999998 6666777756 457 999999 6777776431
Q ss_pred ---------CCceEEeCCCCCC-CC--C-CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEe
Q 021707 204 ---------PGVTHIGGDMFNS-IP--A-ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 204 ---------~ri~~~~~d~~~~-~p--~-~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
.+|+|..+|+.++ +| . .|+|++++++++++++...+++++++++|+|||.|++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 3699999999984 55 3 49999999999999988899999999999999999883
No 67
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.35 E-value=1.2e-12 Score=118.18 Aligned_cols=111 Identities=11% Similarity=0.064 Sum_probs=88.8
Q ss_pred cHHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC---------CCceEEeCCCCCC
Q 021707 147 FMTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI---------PGVTHIGGDMFNS 216 (309)
Q Consensus 147 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~---------~ri~~~~~d~~~~ 216 (309)
....+++.++ . ...+|||||||+|.++..+++. +.+ ++++|+ +.+++.++++ .+++++.+|+.+.
T Consensus 71 ~~~~~~~~~~-~-~~~~vLDlGcG~G~~~~~l~~~--~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~ 145 (299)
T 3g2m_A 71 EAREFATRTG-P-VSGPVLELAAGMGRLTFPFLDL--GWE-VTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF 145 (299)
T ss_dssp HHHHHHHHHC-C-CCSCEEEETCTTTTTHHHHHTT--TCC-EEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC
T ss_pred HHHHHHHhhC-C-CCCcEEEEeccCCHHHHHHHHc--CCe-EEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcC
Confidence 3455666664 3 3349999999999999999988 467 999998 7788777642 6799999999874
Q ss_pred -CCC-Cceeee-hhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccC
Q 021707 217 -IPA-ANAIFM-KWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLL 262 (309)
Q Consensus 217 -~p~-~D~i~~-~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~ 262 (309)
.+. .|+|++ ..++|++++++..++|+++++.|+|||+|++.....+
T Consensus 146 ~~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 146 ALDKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp CCSCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred CcCCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCc
Confidence 444 498885 5788888888889999999999999999999876554
No 68
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.35 E-value=4.3e-13 Score=110.58 Aligned_cols=107 Identities=15% Similarity=0.153 Sum_probs=88.4
Q ss_pred HHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC-CCCceEEeCCCCCCCCC--Cceeeeh
Q 021707 151 VLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS-IPGVTHIGGDMFNSIPA--ANAIFMK 226 (309)
Q Consensus 151 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~-~~ri~~~~~d~~~~~p~--~D~i~~~ 226 (309)
+++.++ ..+..+|||||||+|.++..+++.+. + ++++|. +.+++.+++ .++++++.+| .+++. .|+|++.
T Consensus 9 ~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~--~-v~~vD~s~~~~~~a~~~~~~v~~~~~d--~~~~~~~~D~v~~~ 82 (170)
T 3i9f_A 9 YLPNIF-EGKKGVIVDYGCGNGFYCKYLLEFAT--K-LYCIDINVIALKEVKEKFDSVITLSDP--KEIPDNSVDFILFA 82 (170)
T ss_dssp THHHHH-SSCCEEEEEETCTTCTTHHHHHTTEE--E-EEEECSCHHHHHHHHHHCTTSEEESSG--GGSCTTCEEEEEEE
T ss_pred HHHhcC-cCCCCeEEEECCCCCHHHHHHHhhcC--e-EEEEeCCHHHHHHHHHhCCCcEEEeCC--CCCCCCceEEEEEc
Confidence 444444 56678999999999999999999984 6 999998 677777765 4899999999 33443 4999999
Q ss_pred hhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCCC
Q 021707 227 WVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLDDS 265 (309)
Q Consensus 227 ~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~~ 265 (309)
+++|++++. .++|+++++.|+|||++++.+.......
T Consensus 83 ~~l~~~~~~--~~~l~~~~~~L~pgG~l~~~~~~~~~~~ 119 (170)
T 3i9f_A 83 NSFHDMDDK--QHVISEVKRILKDDGRVIIIDWRKENTG 119 (170)
T ss_dssp SCSTTCSCH--HHHHHHHHHHEEEEEEEEEEEECSSCCS
T ss_pred cchhcccCH--HHHHHHHHHhcCCCCEEEEEEcCccccc
Confidence 999999765 5899999999999999999998766543
No 69
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.35 E-value=3.4e-12 Score=111.00 Aligned_cols=100 Identities=15% Similarity=0.114 Sum_probs=84.3
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC---CCceEEeCCCCCC-CCC--Cceeeehhhhhc
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI---PGVTHIGGDMFNS-IPA--ANAIFMKWVLAT 231 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~---~ri~~~~~d~~~~-~p~--~D~i~~~~vlh~ 231 (309)
+...+|||||||+|.++..+++. +.+ ++++|. +.+++.+++. .+++++.+|+.+. ++. .|+|++.+++|+
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 128 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT--GYK-AVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEW 128 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCE-EEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc--CCe-EEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhh
Confidence 35679999999999999999988 557 999998 7777777654 7899999999874 443 499999999999
Q ss_pred CChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 232 WTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 232 ~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
+++. .++|+++++.|+|||++++.+.....
T Consensus 129 ~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~ 158 (242)
T 3l8d_A 129 TEEP--LRALNEIKRVLKSDGYACIAILGPTA 158 (242)
T ss_dssp SSCH--HHHHHHHHHHEEEEEEEEEEEECTTC
T ss_pred ccCH--HHHHHHHHHHhCCCeEEEEEEcCCcc
Confidence 9776 48999999999999999999855443
No 70
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.34 E-value=1.2e-12 Score=111.31 Aligned_cols=104 Identities=12% Similarity=0.064 Sum_probs=84.8
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-----CCceEEeCCCCCC-CCC--Cceeeehhhh
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-----PGVTHIGGDMFNS-IPA--ANAIFMKWVL 229 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-----~ri~~~~~d~~~~-~p~--~D~i~~~~vl 229 (309)
....+|||||||+|.++..++.. ++.+ ++++|. +.+++.+++. .+++++.+|+.+. ++. .|+|++..++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~-~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVE-DGYK-TYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTI 99 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHH-TTCE-EEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCG
T ss_pred CCCCEEEEECCCCCHHHHHHHHh-CCCE-EEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChH
Confidence 34679999999999985555544 5678 999998 6777776542 6799999999764 443 4999999999
Q ss_pred hcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 230 ATWTDDECKLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 230 h~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
|+++.++..++|++++++|+|||++++.+...++.
T Consensus 100 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 134 (209)
T 2p8j_A 100 FHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDE 134 (209)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTST
T ss_pred HhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccch
Confidence 99988888999999999999999999998776543
No 71
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.34 E-value=9.4e-13 Score=116.49 Aligned_cols=99 Identities=6% Similarity=-0.050 Sum_probs=82.1
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC-----------------------CCCceEEeCCCC
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS-----------------------IPGVTHIGGDMF 214 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~-----------------------~~ri~~~~~d~~ 214 (309)
....+|||+|||+|..+..|++. +.+ ++++|+ +.+++.+++ ..+|+++++|++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~--G~~-V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~ 143 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR--GHT-VVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF 143 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT--TCE-EEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC--CCe-EEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence 35679999999999999999987 457 999998 667776532 257999999998
Q ss_pred CC-CC--C-CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 215 NS-IP--A-ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 215 ~~-~p--~-~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
+. .+ . .|+|+...++|++++++..++++++++.|+|||++++....
T Consensus 144 ~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~ 193 (252)
T 2gb4_A 144 DLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLS 193 (252)
T ss_dssp TGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred cCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEe
Confidence 75 22 3 49999999999999888889999999999999999765443
No 72
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.34 E-value=1.5e-12 Score=116.57 Aligned_cols=111 Identities=14% Similarity=0.091 Sum_probs=90.6
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-----CCceEEeCCCCCC-CCC-C
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-----PGVTHIGGDMFNS-IPA-A 220 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-----~ri~~~~~d~~~~-~p~-~ 220 (309)
..+++.++ .....+|||||||+|.++..+++. +.+ ++++|. +.+++.+++. .+++++.+|+.+. .+. .
T Consensus 110 ~~~~~~~~-~~~~~~vLD~GcG~G~~~~~l~~~--g~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~f 185 (286)
T 3m70_A 110 GDVVDAAK-IISPCKVLDLGCGQGRNSLYLSLL--GYD-VTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENY 185 (286)
T ss_dssp HHHHHHHH-HSCSCEEEEESCTTCHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCE
T ss_pred HHHHHHhh-ccCCCcEEEECCCCCHHHHHHHHC--CCe-EEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCc
Confidence 44555554 446789999999999999999988 457 999998 6677766542 3899999999875 333 4
Q ss_pred ceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 221 NAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 221 D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
|+|++..++|++++++..++|+++++.|+|||++++......+
T Consensus 186 D~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 228 (286)
T 3m70_A 186 DFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTD 228 (286)
T ss_dssp EEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCS
T ss_pred cEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCC
Confidence 9999999999999988899999999999999998887765544
No 73
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.33 E-value=3.3e-12 Score=112.39 Aligned_cols=95 Identities=13% Similarity=0.142 Sum_probs=80.2
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC-----CCCceEEeCCCCCC-CCC--Cceeeehhh
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS-----IPGVTHIGGDMFNS-IPA--ANAIFMKWV 228 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~-----~~ri~~~~~d~~~~-~p~--~D~i~~~~v 228 (309)
.....+|||||||+|.++..+++. ..+ ++++|. +.+++.+++ .++++++.+|+.+. ++. .|+|++.++
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 113 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR--GYR-YIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHL 113 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT--TCE-EEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESC
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC--CCE-EEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCc
Confidence 556789999999999999999987 467 999998 667766643 37899999999764 443 399999999
Q ss_pred hhcCChhHHHHHHHHHHHhcCCCcEEEEe
Q 021707 229 LATWTDDECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 229 lh~~~d~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
+|++++. .++|++++++|+|||++++.
T Consensus 114 l~~~~~~--~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 114 WHLVPDW--PKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GGGCTTH--HHHHHHHHHHEEEEEEEEEE
T ss_pred hhhcCCH--HHHHHHHHHHCCCCcEEEEE
Confidence 9999865 58999999999999999988
No 74
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.32 E-value=6.7e-12 Score=106.73 Aligned_cols=106 Identities=11% Similarity=0.076 Sum_probs=87.8
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCCCC---
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNSIP--- 218 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~~p--- 218 (309)
..+++.++ .....+|||||||+|.++..+++.+|..+ ++++|. +.+++.++++ ++++++.+|+.+..+
T Consensus 30 ~~~l~~l~-~~~~~~vLDiG~G~G~~~~~la~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 107 (204)
T 3e05_A 30 AVTLSKLR-LQDDLVMWDIGAGSASVSIEASNLMPNGR-IFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLP 107 (204)
T ss_dssp HHHHHHTT-CCTTCEEEEETCTTCHHHHHHHHHCTTSE-EEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSC
T ss_pred HHHHHHcC-CCCCCEEEEECCCCCHHHHHHHHHCCCCE-EEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCC
Confidence 44566664 66778999999999999999999999999 999999 7777777642 689999999977543
Q ss_pred CCceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecccc
Q 021707 219 AANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 219 ~~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
..|+|++...++ +..++++++++.|+|||++++.....
T Consensus 108 ~~D~i~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~~ 145 (204)
T 3e05_A 108 DPDRVFIGGSGG-----MLEEIIDAVDRRLKSEGVIVLNAVTL 145 (204)
T ss_dssp CCSEEEESCCTT-----CHHHHHHHHHHHCCTTCEEEEEECBH
T ss_pred CCCEEEECCCCc-----CHHHHHHHHHHhcCCCeEEEEEeccc
Confidence 359999988775 34689999999999999999976554
No 75
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.30 E-value=1.7e-12 Score=116.18 Aligned_cols=104 Identities=19% Similarity=0.198 Sum_probs=85.2
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCCC--CC
Q 021707 150 SVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNSI--PA 219 (309)
Q Consensus 150 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~~--p~ 219 (309)
.+++.+. . +..+|||||||+|.++..+++. ..+ ++++|. +.+++.+++. ++++++.+|+.+.. +.
T Consensus 60 ~~l~~~~-~-~~~~vLDiGcG~G~~~~~l~~~--~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 134 (285)
T 4htf_A 60 RVLAEMG-P-QKLRVLDAGGGEGQTAIKMAER--GHQ-VILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLE 134 (285)
T ss_dssp HHHHHTC-S-SCCEEEEETCTTCHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCS
T ss_pred HHHHhcC-C-CCCEEEEeCCcchHHHHHHHHC--CCE-EEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcC
Confidence 3455543 2 3579999999999999999988 567 999998 7777777642 68999999997652 33
Q ss_pred --CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 220 --ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 220 --~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
.|+|++..++|++++. .++|+++++.|+|||++++.+..
T Consensus 135 ~~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 135 TPVDLILFHAVLEWVADP--RSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp SCEEEEEEESCGGGCSCH--HHHHHHHHHTEEEEEEEEEEEEB
T ss_pred CCceEEEECchhhcccCH--HHHHHHHHHHcCCCeEEEEEEeC
Confidence 4999999999999876 58999999999999999998754
No 76
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.30 E-value=5.3e-12 Score=108.99 Aligned_cols=102 Identities=16% Similarity=0.113 Sum_probs=84.0
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-----------CCceEEeCCCCCC-CCC--Ccee
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-----------PGVTHIGGDMFNS-IPA--ANAI 223 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-----------~ri~~~~~d~~~~-~p~--~D~i 223 (309)
++..+|||||||+|.++..+++. +.+ ++++|. +.+++.+++. .+++++.+|+.+. ++. .|+|
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 105 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK--GYS-VTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFA 105 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC--CCe-EEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEE
Confidence 35679999999999999999988 567 999998 6676665431 3689999999764 433 4999
Q ss_pred eehhhhhcCChh-HHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 224 FMKWVLATWTDD-ECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 224 ~~~~vlh~~~d~-~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
++..++|++++. +..++|+++++.|+|||++++.+.....
T Consensus 106 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 146 (235)
T 3sm3_A 106 VMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNW 146 (235)
T ss_dssp EEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCT
T ss_pred EEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcch
Confidence 999999999764 4678999999999999999999876543
No 77
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.29 E-value=3.4e-12 Score=105.65 Aligned_cols=105 Identities=18% Similarity=0.232 Sum_probs=84.0
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCCCC---
Q 021707 150 SVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNSIP--- 218 (309)
Q Consensus 150 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~~p--- 218 (309)
.+++.++ .....+|||||||+|.++..+++.+|..+ ++++|. +.+++.++++ +++ ++.+|..+.++
T Consensus 16 ~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~ 92 (178)
T 3hm2_A 16 LAISALA-PKPHETLWDIGGGSGSIAIEWLRSTPQTT-AVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVP 92 (178)
T ss_dssp HHHHHHC-CCTTEEEEEESTTTTHHHHHHHTTSSSEE-EEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCC
T ss_pred HHHHHhc-ccCCCeEEEeCCCCCHHHHHHHHHCCCCe-EEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccC
Confidence 3455554 66678999999999999999999999989 999999 6677776532 378 88898876543
Q ss_pred C-CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 219 A-ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 219 ~-~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
+ .|+|++...+|+ .++++++++.|+|||++++.+...+.
T Consensus 93 ~~~D~i~~~~~~~~------~~~l~~~~~~L~~gG~l~~~~~~~~~ 132 (178)
T 3hm2_A 93 DNPDVIFIGGGLTA------PGVFAAAWKRLPVGGRLVANAVTVES 132 (178)
T ss_dssp SCCSEEEECC-TTC------TTHHHHHHHTCCTTCEEEEEECSHHH
T ss_pred CCCCEEEECCcccH------HHHHHHHHHhcCCCCEEEEEeecccc
Confidence 2 599999999986 47899999999999999988765543
No 78
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.29 E-value=1.7e-11 Score=102.40 Aligned_cols=108 Identities=19% Similarity=0.179 Sum_probs=88.7
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-CCceEEeCCCCCC-CCC--Ccee
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-PGVTHIGGDMFNS-IPA--ANAI 223 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-~ri~~~~~d~~~~-~p~--~D~i 223 (309)
..++..+ .....+|||||||+|.++..+++. +.+ ++++|. +.+++.+++. .+++++.+|+.+. .+. .|+|
T Consensus 37 ~~~l~~~--~~~~~~vLdiG~G~G~~~~~l~~~--~~~-v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i 111 (195)
T 3cgg_A 37 ARLIDAM--APRGAKILDAGCGQGRIGGYLSKQ--GHD-VLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLI 111 (195)
T ss_dssp HHHHHHH--SCTTCEEEEETCTTTHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEE
T ss_pred HHHHHHh--ccCCCeEEEECCCCCHHHHHHHHC--CCc-EEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEE
Confidence 3455555 346679999999999999999987 457 999998 6777777653 6799999999874 443 4999
Q ss_pred eeh-hhhhcCChhHHHHHHHHHHHhcCCCcEEEEecccc
Q 021707 224 FMK-WVLATWTDDECKLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 224 ~~~-~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
++. .++|++++++..++|+++++.|+|||++++.....
T Consensus 112 ~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 112 VSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp EECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred EECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 998 89999988888999999999999999999876543
No 79
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.28 E-value=2.5e-12 Score=115.35 Aligned_cols=106 Identities=17% Similarity=0.174 Sum_probs=84.7
Q ss_pred HHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC----------CCCceEEeCCCCCC---
Q 021707 151 VLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS----------IPGVTHIGGDMFNS--- 216 (309)
Q Consensus 151 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~----------~~ri~~~~~d~~~~--- 216 (309)
+.+.++ ..+..+|||||||+|.++..+++..+ + ++++|+ +.+++.+++ ..++.+..+|+.+.
T Consensus 49 l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~--~-v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 124 (293)
T 3thr_A 49 LLGLLR-QHGCHRVLDVACGTGVDSIMLVEEGF--S-VTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKD 124 (293)
T ss_dssp HHHHHH-HTTCCEEEETTCTTSHHHHHHHHTTC--E-EEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHH
T ss_pred HHHHhc-ccCCCEEEEecCCCCHHHHHHHHCCC--e-EEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccc
Confidence 344443 34567999999999999999999854 7 999998 677777643 16788999998652
Q ss_pred -CCC--Cceeeeh-hhhhcCCh-----hHHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 217 -IPA--ANAIFMK-WVLATWTD-----DECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 217 -~p~--~D~i~~~-~vlh~~~d-----~~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
++. .|+|++. +++|++++ ++..++|+++++.|+|||++++..+.
T Consensus 125 ~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 125 VPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp SCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred cccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 233 4999998 99999998 67789999999999999999987643
No 80
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.27 E-value=7.1e-12 Score=106.67 Aligned_cols=102 Identities=14% Similarity=0.187 Sum_probs=83.4
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC----CCCceEEeCCCCCC-CCC--Cceeeehhhhh
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS----IPGVTHIGGDMFNS-IPA--ANAIFMKWVLA 230 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~----~~ri~~~~~d~~~~-~p~--~D~i~~~~vlh 230 (309)
....+|||||||+|.++..+++..+. + ++++|. +.+++.+++ .++++++.+|+.+. ++. .|+|++..++|
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~-~-v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~ 118 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFP-N-VTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLD 118 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCC-C-EEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCC-c-EEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchh
Confidence 45679999999999999999998765 7 999998 667766654 26899999999874 443 49999988887
Q ss_pred cCC-------------hhHHHHHHHHHHHhcCCCcEEEEeccccC
Q 021707 231 TWT-------------DDECKLIMENCYKALLAGGKLIACEPVLL 262 (309)
Q Consensus 231 ~~~-------------d~~~~~iL~~~~~aL~pgG~l~i~e~~~~ 262 (309)
++. ..+..++|++++++|+|||++++.++..+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 119 ALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp HHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCH
T ss_pred hhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCc
Confidence 655 44668999999999999999999986543
No 81
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.27 E-value=7.3e-12 Score=108.86 Aligned_cols=93 Identities=25% Similarity=0.312 Sum_probs=78.0
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-----CCceEEeCCCCCC-CCC-Cceeeehh-hhh
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-----PGVTHIGGDMFNS-IPA-ANAIFMKW-VLA 230 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-----~ri~~~~~d~~~~-~p~-~D~i~~~~-vlh 230 (309)
...+|||||||+|.++..+++. .+ ++++|. +.+++.+++. .+++++.+|+.+. .+. .|+|++.. ++|
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~---~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~~~ 108 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH---YE-VTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAITILCDSLN 108 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT---SE-EEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEEEECTTGGG
T ss_pred CCCeEEEecCCCCHHHHHHhhC---Ce-EEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEEEEeCCchh
Confidence 4579999999999999999887 57 999999 7777777642 5799999998764 444 49999886 999
Q ss_pred cC-ChhHHHHHHHHHHHhcCCCcEEEE
Q 021707 231 TW-TDDECKLIMENCYKALLAGGKLIA 256 (309)
Q Consensus 231 ~~-~d~~~~~iL~~~~~aL~pgG~l~i 256 (309)
++ +.++..++|++++++|+|||++++
T Consensus 109 ~~~~~~~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 109 YLQTEADVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp GCCSHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 88 556778999999999999999887
No 82
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.26 E-value=8.4e-12 Score=110.77 Aligned_cols=108 Identities=12% Similarity=0.072 Sum_probs=82.8
Q ss_pred cHHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC---CCceEEeCCCCC----CCC
Q 021707 147 FMTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI---PGVTHIGGDMFN----SIP 218 (309)
Q Consensus 147 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~---~ri~~~~~d~~~----~~p 218 (309)
....+++.++ .....+|||||||+|.++..++++. .+ ++++|. +.+++.++++ ..+.....++.. ..+
T Consensus 33 ~~~~il~~l~-l~~g~~VLDlGcGtG~~a~~La~~g--~~-V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~ 108 (261)
T 3iv6_A 33 DRENDIFLEN-IVPGSTVAVIGASTRFLIEKALERG--AS-VTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELA 108 (261)
T ss_dssp HHHHHHHTTT-CCTTCEEEEECTTCHHHHHHHHHTT--CE-EEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGT
T ss_pred HHHHHHHhcC-CCCcCEEEEEeCcchHHHHHHHhcC--CE-EEEEECCHHHHHHHHHHHHhccceeeeeecccccccccC
Confidence 4456677765 6777899999999999999999874 56 999998 7788877653 123333333322 112
Q ss_pred C-CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecc
Q 021707 219 A-ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 219 ~-~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
. .|+|++..++|+++.++..++|+++++.| |||++++.-.
T Consensus 109 ~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 109 GHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp TCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred CCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 2 49999999999999888899999999999 9999998754
No 83
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.26 E-value=9.9e-12 Score=110.35 Aligned_cols=112 Identities=10% Similarity=0.103 Sum_probs=88.7
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhc-CCCceEEEeechh-------HHhhCCCC-------CCceEEeCC-
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKH-HFICEGINFDLPE-------VVGEAPSI-------PGVTHIGGD- 212 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~~D~p~-------~~~~a~~~-------~ri~~~~~d- 212 (309)
..+++.++ .....+|||||||+|.++..+++++ |+.+ ++++|+.. +++.++++ ++++++.+|
T Consensus 33 ~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~-v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 110 (275)
T 3bkx_A 33 LAIAEAWQ-VKPGEKILEIGCGQGDLSAVLADQVGSSGH-VTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTN 110 (275)
T ss_dssp HHHHHHHT-CCTTCEEEEESCTTSHHHHHHHHHHCTTCE-EEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCC
T ss_pred HHHHHHcC-CCCCCEEEEeCCCCCHHHHHHHHHhCCCCE-EEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECCh
Confidence 45666665 6677899999999999999999996 7788 99999943 66665432 589999998
Q ss_pred CCCC---CCC--CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 213 MFNS---IPA--ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 213 ~~~~---~p~--~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
+... ++. .|+|++..++|++++.+ .+++.+++.++|||++++.+...+..
T Consensus 111 ~~~~~~~~~~~~fD~v~~~~~l~~~~~~~--~~~~~~~~l~~~gG~l~~~~~~~~~~ 165 (275)
T 3bkx_A 111 LSDDLGPIADQHFDRVVLAHSLWYFASAN--ALALLFKNMAAVCDHVDVAEWSMQPT 165 (275)
T ss_dssp TTTCCGGGTTCCCSEEEEESCGGGSSCHH--HHHHHHHHHTTTCSEEEEEEECSSCS
T ss_pred hhhccCCCCCCCEEEEEEccchhhCCCHH--HHHHHHHHHhCCCCEEEEEEecCCCC
Confidence 5432 232 49999999999999875 47777777777899999999887765
No 84
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.26 E-value=1.2e-11 Score=108.32 Aligned_cols=106 Identities=16% Similarity=0.235 Sum_probs=83.8
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-----CCceEEeCCCCCC-CCC-C
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-----PGVTHIGGDMFNS-IPA-A 220 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-----~ri~~~~~d~~~~-~p~-~ 220 (309)
..+++... ..+..+|||||||+|.++..+++. +.+ ++++|. +.+++.++++ .+++++.+|+.+. .+. .
T Consensus 31 ~~~~~~~~-~~~~~~vLDlGcG~G~~~~~l~~~--~~~-v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~f 106 (252)
T 1wzn_A 31 EEIFKEDA-KREVRRVLDLACGTGIPTLELAER--GYE-VVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEF 106 (252)
T ss_dssp HHHHHHTC-SSCCCEEEEETCTTCHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCE
T ss_pred HHHHHHhc-ccCCCEEEEeCCCCCHHHHHHHHC--CCe-EEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCc
Confidence 34455443 445679999999999999999987 567 999999 7777776542 4799999999764 444 4
Q ss_pred ceeeeh-hhhhcCChhHHHHHHHHHHHhcCCCcEEEEec
Q 021707 221 NAIFMK-WVLATWTDDECKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 221 D~i~~~-~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e 258 (309)
|+|++. ..+|+++.++..++|+++++.|+|||.+++.-
T Consensus 107 D~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 107 DAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp EEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 999986 56677787888999999999999999988643
No 85
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.25 E-value=1.5e-11 Score=105.59 Aligned_cols=106 Identities=19% Similarity=0.194 Sum_probs=85.1
Q ss_pred cHHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCCCCceEEeCCCCCC---CCC--C
Q 021707 147 FMTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSIPGVTHIGGDMFNS---IPA--A 220 (309)
Q Consensus 147 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~~ri~~~~~d~~~~---~p~--~ 220 (309)
....+++.++ .+..+|||||||+|.++..+++. + .+ ++++|. +.+++.+++.. .+++.+|+.+. ++. .
T Consensus 21 ~~~~l~~~~~--~~~~~vLdiG~G~G~~~~~l~~~-~-~~-~~~~D~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~f 94 (230)
T 3cc8_A 21 VNPNLLKHIK--KEWKEVLDIGCSSGALGAAIKEN-G-TR-VSGIEAFPEAAEQAKEKL-DHVVLGDIETMDMPYEEEQF 94 (230)
T ss_dssp CCHHHHTTCC--TTCSEEEEETCTTSHHHHHHHTT-T-CE-EEEEESSHHHHHHHHTTS-SEEEESCTTTCCCCSCTTCE
T ss_pred HHHHHHHHhc--cCCCcEEEeCCCCCHHHHHHHhc-C-Ce-EEEEeCCHHHHHHHHHhC-CcEEEcchhhcCCCCCCCcc
Confidence 3455666653 45679999999999999999988 4 77 999998 67777776543 37888998752 333 3
Q ss_pred ceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 221 NAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 221 D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
|+|++.+++|++++. .++|+++++.|+|||++++..+.
T Consensus 95 D~v~~~~~l~~~~~~--~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 95 DCVIFGDVLEHLFDP--WAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp EEEEEESCGGGSSCH--HHHHHHTGGGEEEEEEEEEEEEC
T ss_pred CEEEECChhhhcCCH--HHHHHHHHHHcCCCCEEEEEeCC
Confidence 999999999999876 48999999999999999998754
No 86
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.24 E-value=8.9e-12 Score=108.30 Aligned_cols=95 Identities=21% Similarity=0.162 Sum_probs=79.8
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-----CCceEEeCCCCCC-CCC-Cceeeehh-hhh
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-----PGVTHIGGDMFNS-IPA-ANAIFMKW-VLA 230 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-----~ri~~~~~d~~~~-~p~-~D~i~~~~-vlh 230 (309)
+..+|||||||+|.++..+++. ..+ ++++|. +.+++.+++. .+++++.+|+.+. .+. .|+|++.+ ++|
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~-~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~ 113 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKN-TWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCLDSTN 113 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSE-EEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEECTTGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCc-EEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCceEEEEcCcccc
Confidence 5679999999999999999988 456 999998 7777777653 2899999999764 444 49999998 999
Q ss_pred cCCh-hHHHHHHHHHHHhcCCCcEEEEe
Q 021707 231 TWTD-DECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 231 ~~~d-~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
++++ ++..++|++++++|+|||++++.
T Consensus 114 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 114 YIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp GCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 9953 67789999999999999999873
No 87
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.22 E-value=1.7e-11 Score=104.53 Aligned_cols=101 Identities=16% Similarity=0.164 Sum_probs=82.3
Q ss_pred HHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCC-ceEEEeec-hhHHhhCCCC-CCceEEeCCCCCC-CCC--Cceee
Q 021707 151 VLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFI-CEGINFDL-PEVVGEAPSI-PGVTHIGGDMFNS-IPA--ANAIF 224 (309)
Q Consensus 151 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~~D~-p~~~~~a~~~-~ri~~~~~d~~~~-~p~--~D~i~ 224 (309)
++..+. .+..+|||||||+|.++..+ +. + ++++|. +.+++.++++ ++++++.+|+.+. ++. .|+|+
T Consensus 29 ~l~~~~--~~~~~vLdiG~G~G~~~~~l-----~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 100 (211)
T 2gs9_A 29 ALKGLL--PPGESLLEVGAGTGYWLRRL-----PYPQ-KVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVL 100 (211)
T ss_dssp HHHTTC--CCCSEEEEETCTTCHHHHHC-----CCSE-EEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEE
T ss_pred HHHHhc--CCCCeEEEECCCCCHhHHhC-----CCCe-EEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEE
Confidence 444442 25679999999999999887 44 6 999998 6777777654 7899999998764 443 39999
Q ss_pred ehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecccc
Q 021707 225 MKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 225 ~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
+.+++|++++. .++|+++++.|+|||++++.++..
T Consensus 101 ~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 101 LFTTLEFVEDV--ERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp EESCTTTCSCH--HHHHHHHHHHEEEEEEEEEEEECT
T ss_pred EcChhhhcCCH--HHHHHHHHHHcCCCCEEEEEecCC
Confidence 99999999865 589999999999999999987654
No 88
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.22 E-value=6.9e-12 Score=107.55 Aligned_cols=107 Identities=17% Similarity=0.118 Sum_probs=85.7
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCCCCceEEeCCCCCC-----CC-C-Cc
Q 021707 150 SVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSIPGVTHIGGDMFNS-----IP-A-AN 221 (309)
Q Consensus 150 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~~ri~~~~~d~~~~-----~p-~-~D 221 (309)
.+++.+. .....+|||||||+|.++..+++. +.+ ++++|. +.+++.+++..+++++.+|+.+. .+ . .|
T Consensus 43 ~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 43 AILLAIL-GRQPERVLDLGCGEGWLLRALADR--GIE-AVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp HHHHHHH-HTCCSEEEEETCTTCHHHHHHHTT--TCE-EEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEE
T ss_pred HHHHHhh-cCCCCEEEEeCCCCCHHHHHHHHC--CCE-EEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCcc
Confidence 3445443 344589999999999999999988 557 999998 77888888778899998887542 22 2 49
Q ss_pred eeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 222 AIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 222 ~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
+|++.+++| +.+. .++|+++++.|+|||++++.++....
T Consensus 119 ~v~~~~~l~-~~~~--~~~l~~~~~~L~pgG~l~~~~~~~~~ 157 (227)
T 3e8s_A 119 LICANFALL-HQDI--IELLSAMRTLLVPGGALVIQTLHPWS 157 (227)
T ss_dssp EEEEESCCC-SSCC--HHHHHHHHHTEEEEEEEEEEECCTTT
T ss_pred EEEECchhh-hhhH--HHHHHHHHHHhCCCeEEEEEecCccc
Confidence 999999999 5554 58999999999999999998875543
No 89
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.21 E-value=8.5e-12 Score=115.11 Aligned_cols=111 Identities=14% Similarity=0.143 Sum_probs=89.5
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-----CCceEEeCCCCCCCCC-C
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-----PGVTHIGGDMFNSIPA-A 220 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-----~ri~~~~~d~~~~~p~-~ 220 (309)
...+++.++ .....+|||||||+|.++..+++.+|+.+ ++++|. +.+++.++++ .+++++.+|+++..++ .
T Consensus 185 ~~~ll~~l~-~~~~~~VLDlGcG~G~~~~~la~~~~~~~-v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~f 262 (343)
T 2pjd_A 185 SQLLLSTLT-PHTKGKVLDVGCGAGVLSVAFARHSPKIR-LTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRF 262 (343)
T ss_dssp HHHHHHHSC-TTCCSBCCBTTCTTSHHHHHHHHHCTTCB-CEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCE
T ss_pred HHHHHHhcC-cCCCCeEEEecCccCHHHHHHHHHCCCCE-EEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCe
Confidence 345666664 44457999999999999999999999999 999999 6677776542 3477899999876544 4
Q ss_pred ceeeehhhhhc---CChhHHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 221 NAIFMKWVLAT---WTDDECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 221 D~i~~~~vlh~---~~d~~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
|+|+++.++|+ +..+...++|++++++|+|||+++++...
T Consensus 263 D~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 263 DMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp EEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred eEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 99999999986 34556789999999999999999998654
No 90
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.21 E-value=3.8e-11 Score=100.23 Aligned_cols=109 Identities=11% Similarity=0.124 Sum_probs=87.0
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------C--CceEEeCCCCCCCC
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------P--GVTHIGGDMFNSIP 218 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~--ri~~~~~d~~~~~p 218 (309)
...+++.+. .....+|||+|||+|.++..+++. ..+ ++++|. +.+++.++++ + |++++.+|+.+..+
T Consensus 41 ~~~l~~~~~-~~~~~~vLdiG~G~G~~~~~~~~~--~~~-v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~ 116 (194)
T 1dus_A 41 TKILVENVV-VDKDDDILDLGCGYGVIGIALADE--VKS-TTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK 116 (194)
T ss_dssp HHHHHHHCC-CCTTCEEEEETCTTSHHHHHHGGG--SSE-EEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT
T ss_pred HHHHHHHcc-cCCCCeEEEeCCCCCHHHHHHHHc--CCe-EEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc
Confidence 345666664 566789999999999999999988 667 999998 6677666542 3 49999999988754
Q ss_pred C--CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecccc
Q 021707 219 A--ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 219 ~--~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
. .|+|++...+|+ ..++..++++++++.|+|||++++.....
T Consensus 117 ~~~~D~v~~~~~~~~-~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 117 DRKYNKIITNPPIRA-GKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp TSCEEEEEECCCSTT-CHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred cCCceEEEECCCccc-chhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 4 499999887764 34566799999999999999999987654
No 91
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.20 E-value=5.5e-12 Score=113.52 Aligned_cols=98 Identities=13% Similarity=0.070 Sum_probs=72.9
Q ss_pred CcceEEEecCCccHHHH----HHHHhcCCCceE--EEeec-hhHHhhCCCC-------CCceE--EeCCCCCC-------
Q 021707 160 GVKRLVDVGGSAGDCLR----MILQKHHFICEG--INFDL-PEVVGEAPSI-------PGVTH--IGGDMFNS------- 216 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~----~l~~~~p~~~~~--~~~D~-p~~~~~a~~~-------~ri~~--~~~d~~~~------- 216 (309)
...+|||||||+|.++. .++.++|+.+ + +++|. +.|++.+++. +++++ ..++..+.
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~-v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVC-INNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCE-EEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCce-eeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 45799999999997654 4556678875 4 99998 6777766432 34444 45554221
Q ss_pred CC-C-CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 217 IP-A-ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 217 ~p-~-~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
++ . .|+|++++++|+++|. .+.|+++++.|+|||++++.+..
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~--~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDI--PATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCH--HHHHHHHHHTEEEEEEEEEEEEC
T ss_pred cCCCceeEEEEeeeeeecCCH--HHHHHHHHHHcCCCcEEEEEEec
Confidence 12 2 4999999999999987 48999999999999999998643
No 92
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.20 E-value=2.5e-11 Score=113.41 Aligned_cols=107 Identities=15% Similarity=0.124 Sum_probs=86.2
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC---------CCceEEeCCCCCCCCC
Q 021707 150 SVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI---------PGVTHIGGDMFNSIPA 219 (309)
Q Consensus 150 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~---------~ri~~~~~d~~~~~p~ 219 (309)
.+++.++ .....+|||+|||+|.++..+++.+|..+ ++++|. +.+++.++++ .+++++.+|+++.++.
T Consensus 213 ~ll~~l~-~~~~~~VLDlGcG~G~~s~~la~~~p~~~-V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~ 290 (375)
T 4dcm_A 213 FFMQHLP-ENLEGEIVDLGCGNGVIGLTLLDKNPQAK-VVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 290 (375)
T ss_dssp HHHHTCC-CSCCSEEEEETCTTCHHHHHHHHHCTTCE-EEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCT
T ss_pred HHHHhCc-ccCCCeEEEEeCcchHHHHHHHHHCCCCE-EEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCC
Confidence 4566665 44458999999999999999999999999 999998 6777777652 2588899999988664
Q ss_pred --Cceeeehhhhhc---CChhHHHHHHHHHHHhcCCCcEEEEec
Q 021707 220 --ANAIFMKWVLAT---WTDDECKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 220 --~D~i~~~~vlh~---~~d~~~~~iL~~~~~aL~pgG~l~i~e 258 (309)
.|+|+++..+|. .++....++++++++.|+|||+++++.
T Consensus 291 ~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 291 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp TCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 499999988875 445556789999999999999999964
No 93
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.19 E-value=1.9e-11 Score=111.02 Aligned_cols=100 Identities=17% Similarity=0.187 Sum_probs=80.1
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------------CCceEEeCCCCCC-----C--
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------------PGVTHIGGDMFNS-----I-- 217 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------------~ri~~~~~d~~~~-----~-- 217 (309)
....+|||||||+|.++..+++. +..+ ++++|+ +.+++.+++. .+++++.+|+.+. +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~-v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 110 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG-RINK-LVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRD 110 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT-TCSE-EEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSS
T ss_pred CCCCEEEEECCCCcHHHHHHHhc-CCCE-EEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhccc
Confidence 35679999999999999999874 5667 999998 6677766532 3799999999764 2
Q ss_pred CC--CceeeehhhhhcC--ChhHHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 218 PA--ANAIFMKWVLATW--TDDECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 218 p~--~D~i~~~~vlh~~--~d~~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
+. .|+|++..++|+. +.++..++|++++++|+|||.+++..+.
T Consensus 111 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 111 PQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp TTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 22 4999999999987 4456789999999999999999987653
No 94
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.19 E-value=2.1e-11 Score=109.25 Aligned_cols=101 Identities=17% Similarity=0.145 Sum_probs=82.9
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCC-C-CC--Cceeee
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNS-I-PA--ANAIFM 225 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~-~-p~--~D~i~~ 225 (309)
..+..+|||||||+|.++..+++. +..+ ++++|. +.+++.+++. .+++++.+|+.+. + +. .|+|++
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 139 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA-GIGE-YYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISS 139 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH-TCSE-EEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC-CCCE-EEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEE
Confidence 345679999999999999998776 4557 999998 6777766542 4689999999874 4 33 399999
Q ss_pred hhhhhc--CChhHHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 226 KWVLAT--WTDDECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 226 ~~vlh~--~~d~~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
.+++|+ .+.++..++|+++++.|+|||++++..+.
T Consensus 140 ~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 140 QFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp ESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 999998 56777889999999999999999998754
No 95
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.19 E-value=3e-11 Score=100.91 Aligned_cols=103 Identities=16% Similarity=0.091 Sum_probs=74.9
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCC---CCCC-Cceeeeh
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFN---SIPA-ANAIFMK 226 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~---~~p~-~D~i~~~ 226 (309)
.....+|||+|||+|.++..+++. ..+ ++++|. +.+++.++++ ++++++..|... ..++ .|+|++.
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~--~~~-v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~ 96 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL--SKK-VYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFN 96 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT--SSE-EEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh--CCE-EEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEe
Confidence 456689999999999999999988 667 999998 7788777652 789999976644 2233 4999876
Q ss_pred -hhhhc----C--ChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 227 -WVLAT----W--TDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 227 -~vlh~----~--~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
..++. + ..++..++|+++++.|+|||++++....-.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 140 (185)
T 3mti_A 97 LGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHD 140 (185)
T ss_dssp EC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC----
T ss_pred CCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCC
Confidence 33322 0 2245678999999999999999998654333
No 96
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.18 E-value=2.7e-11 Score=103.95 Aligned_cols=103 Identities=9% Similarity=0.083 Sum_probs=76.0
Q ss_pred HHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhh----CCC------CCCceEEeCCCCCC-CC
Q 021707 151 VLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGE----APS------IPGVTHIGGDMFNS-IP 218 (309)
Q Consensus 151 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~----a~~------~~ri~~~~~d~~~~-~p 218 (309)
.++.++ .....+|||||||+|.++..+++.+|+.+ ++++|. +.+++. +++ .++++++.+|+.+. ++
T Consensus 19 ~~~~l~-~~~~~~vLDiGcG~G~~~~~la~~~p~~~-v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~ 96 (218)
T 3mq2_A 19 EFEQLR-SQYDDVVLDVGTGDGKHPYKVARQNPSRL-VVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPL 96 (218)
T ss_dssp HHHHHH-TTSSEEEEEESCTTCHHHHHHHHHCTTEE-EEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSC
T ss_pred HHHHhh-ccCCCEEEEecCCCCHHHHHHHHHCCCCE-EEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCC
Confidence 444443 55678999999999999999999999999 999999 554443 332 25899999999774 33
Q ss_pred CC-ceeee---hhhh--hcCChhHHHHHHHHHHHhcCCCcEEEEe
Q 021707 219 AA-NAIFM---KWVL--ATWTDDECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 219 ~~-D~i~~---~~vl--h~~~d~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
.. |.|++ ...+ |++++. .++|++++++|+|||++++.
T Consensus 97 ~~~d~v~~~~~~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 97 SGVGELHVLMPWGSLLRGVLGSS--PEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp CCEEEEEEESCCHHHHHHHHTSS--SHHHHHHHHTEEEEEEEEEE
T ss_pred CCCCEEEEEccchhhhhhhhccH--HHHHHHHHHHcCCCcEEEEE
Confidence 22 55552 2222 244444 58999999999999999985
No 97
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.18 E-value=8.8e-11 Score=111.17 Aligned_cols=112 Identities=13% Similarity=0.242 Sum_probs=86.3
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhC-------CC--------CCCceEEeC
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEA-------PS--------IPGVTHIGG 211 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a-------~~--------~~ri~~~~~ 211 (309)
...+++.+. .....+|||||||+|.++..+++.++..+ ++++|+ +.+++.| ++ ..+++++.+
T Consensus 231 v~~ml~~l~-l~~g~~VLDLGCGsG~la~~LA~~~g~~~-V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~g 308 (433)
T 1u2z_A 231 LSDVYQQCQ-LKKGDTFMDLGSGVGNCVVQAALECGCAL-SFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLK 308 (433)
T ss_dssp HHHHHHHTT-CCTTCEEEEESCTTSHHHHHHHHHHCCSE-EEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEES
T ss_pred HHHHHHhcC-CCCCCEEEEeCCCcCHHHHHHHHHCCCCE-EEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEc
Confidence 344566664 66778999999999999999999988778 999998 5555544 32 268999988
Q ss_pred CCCC-C--C----CCCceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 212 DMFN-S--I----PAANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 212 d~~~-~--~----p~~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
|.+. . + ..+|+|+++++++ . .+..+.|+++.+.|+|||++++.+.+.++.
T Consensus 309 D~~~~~~~~~~~~~~FDvIvvn~~l~--~-~d~~~~L~el~r~LKpGG~lVi~d~f~p~~ 365 (433)
T 1u2z_A 309 KSFVDNNRVAELIPQCDVILVNNFLF--D-EDLNKKVEKILQTAKVGCKIISLKSLRSLT 365 (433)
T ss_dssp SCSTTCHHHHHHGGGCSEEEECCTTC--C-HHHHHHHHHHHTTCCTTCEEEESSCSSCTT
T ss_pred CccccccccccccCCCCEEEEeCccc--c-ccHHHHHHHHHHhCCCCeEEEEeeccCCcc
Confidence 6543 2 1 2359999887773 2 345678999999999999999999887765
No 98
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.17 E-value=6e-11 Score=101.87 Aligned_cols=96 Identities=10% Similarity=0.132 Sum_probs=74.0
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hh----HHhhCCCCCCceEEeCCCCCC-----CCC-Cceeeeh
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PE----VVGEAPSIPGVTHIGGDMFNS-----IPA-ANAIFMK 226 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~----~~~~a~~~~ri~~~~~d~~~~-----~p~-~D~i~~~ 226 (309)
..++.+|||||||+|.++..+++..++.+ ++++|. +. +.+.+++..++.++.+|+.++ .++ .|+|++.
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~-V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 133 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGI-IYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQD 133 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSE-EEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCE-EEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEe
Confidence 45667999999999999999999988667 999998 44 344454457899999998763 233 4999986
Q ss_pred hhhhcCChhHHHHHHHHHHHhcCCCcEEEEec
Q 021707 227 WVLATWTDDECKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 227 ~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e 258 (309)
. .+ ..+...+|+++++.|+|||++++.-
T Consensus 134 ~-~~---~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 134 I-AQ---KNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp C-CS---TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c-cC---hhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 2 22 2344456999999999999999983
No 99
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.17 E-value=6.5e-11 Score=100.14 Aligned_cols=107 Identities=13% Similarity=0.104 Sum_probs=83.2
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-----CCceEEeCCCCCC-CCC-
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-----PGVTHIGGDMFNS-IPA- 219 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-----~ri~~~~~d~~~~-~p~- 219 (309)
...++..++ .. +|||||||+|.++..+++. +.+ ++++|. +.+++.+++. .+++++.+|+.+. ++.
T Consensus 21 l~~~~~~~~---~~-~vLdiGcG~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~ 93 (202)
T 2kw5_A 21 LVSVANQIP---QG-KILCLAEGEGRNACFLASL--GYE-VTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVAD 93 (202)
T ss_dssp HHHHHHHSC---SS-EEEECCCSCTHHHHHHHTT--TCE-EEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTT
T ss_pred HHHHHHhCC---CC-CEEEECCCCCHhHHHHHhC--CCe-EEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcC
Confidence 344454442 34 9999999999999999987 457 999998 6777777653 3899999999775 443
Q ss_pred -CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 220 -ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 220 -~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
.|+|++. +++++.++..++|+++++.|+|||++++.+.....
T Consensus 94 ~fD~v~~~--~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 136 (202)
T 2kw5_A 94 AWEGIVSI--FCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQ 136 (202)
T ss_dssp TCSEEEEE--CCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTT
T ss_pred CccEEEEE--hhcCCHHHHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence 4999984 34557777889999999999999999999875443
No 100
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.17 E-value=7.1e-11 Score=97.83 Aligned_cols=95 Identities=18% Similarity=0.191 Sum_probs=78.8
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCCCCceEEeCCCCCCCCC--CceeeehhhhhcCChh-
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSIPGVTHIGGDMFNSIPA--ANAIFMKWVLATWTDD- 235 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~~ri~~~~~d~~~~~p~--~D~i~~~~vlh~~~d~- 235 (309)
+..+|||+|||+|.++..+++.+ + ++++|. +.+++. .++++++.+|+.++.+. .|+|+++..+|..++.
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~---~-v~gvD~s~~~~~~---~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~~~~~~~ 95 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN---T-VVSTDLNIRALES---HRGGNLVRADLLCSINQESVDVVVFNPPYVPDTDDP 95 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS---E-EEEEESCHHHHHT---CSSSCEEECSTTTTBCGGGCSEEEECCCCBTTCCCT
T ss_pred CCCeEEEeccCccHHHHHHHhcC---c-EEEEECCHHHHhc---ccCCeEEECChhhhcccCCCCEEEECCCCccCCccc
Confidence 45699999999999999999987 7 999999 667776 57899999999887553 4999998888865543
Q ss_pred ------HHHHHHHHHHHhcCCCcEEEEeccccC
Q 021707 236 ------ECKLIMENCYKALLAGGKLIACEPVLL 262 (309)
Q Consensus 236 ------~~~~iL~~~~~aL~pgG~l~i~e~~~~ 262 (309)
+..++++++.+.+ |||++++.+....
T Consensus 96 ~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~ 127 (170)
T 3q87_B 96 IIGGGYLGREVIDRFVDAV-TVGMLYLLVIEAN 127 (170)
T ss_dssp TTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGG
T ss_pred cccCCcchHHHHHHHHhhC-CCCEEEEEEecCC
Confidence 4567899999999 9999999875543
No 101
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.17 E-value=9.2e-11 Score=104.36 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=82.1
Q ss_pred CcceEEEecCCc--cHHHHHHH-HhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCC---C--C---C-C
Q 021707 160 GVKRLVDVGGSA--GDCLRMIL-QKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNS---I--P---A-A 220 (309)
Q Consensus 160 ~~~~vlDvG~G~--G~~~~~l~-~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~---~--p---~-~ 220 (309)
+..+|||||||+ +....+++ +..|+.+ ++++|. |.|++.+++. .+++++.+|+.+. + | . .
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~ar-Vv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~ 156 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESR-VVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTL 156 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCE-EEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCE-EEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhccccccccc
Confidence 457899999997 33444444 4679999 999999 8899988652 4699999999774 1 1 1 1
Q ss_pred c-----eeeehhhhhcCChhH-HHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 221 N-----AIFMKWVLATWTDDE-CKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 221 D-----~i~~~~vlh~~~d~~-~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
| .++++.+||++++.+ ...+|++++++|+|||+|++.+...+.
T Consensus 157 D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~ 205 (277)
T 3giw_A 157 DLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEF 205 (277)
T ss_dssp CTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTT
T ss_pred CcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCC
Confidence 4 688999999999876 578999999999999999999877654
No 102
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.17 E-value=1.4e-11 Score=106.43 Aligned_cols=97 Identities=13% Similarity=0.177 Sum_probs=75.1
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC------CCCceEEeCCCCCC----CCC-C-ceeeeh
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS------IPGVTHIGGDMFNS----IPA-A-NAIFMK 226 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~------~~ri~~~~~d~~~~----~p~-~-D~i~~~ 226 (309)
...+|||||||+|.++..+++.+|+.+ ++++|. +.+++.+++ .++++++.+|+.+. ++. . |.|++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~-v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQD-FLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSE-EEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCe-EEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 457999999999999999999999999 999998 667766543 26799999997653 444 3 888876
Q ss_pred hhhhcCChh-HH------HHHHHHHHHhcCCCcEEEEec
Q 021707 227 WVLATWTDD-EC------KLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 227 ~vlh~~~d~-~~------~~iL~~~~~aL~pgG~l~i~e 258 (309)
+... |+.. .. ..+++++++.|+|||++++..
T Consensus 113 ~~~p-~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 113 FPDP-WHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp SCCC-CCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCC-ccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 4432 2222 11 259999999999999998864
No 103
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.16 E-value=6.6e-11 Score=118.43 Aligned_cols=101 Identities=19% Similarity=0.219 Sum_probs=84.8
Q ss_pred CCcceEEEecCCccHHHHHHHHhc-CCCceEEEeec-hhHHhhCCC------------CCCceEEeCCCCCC-CCC--Cc
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKH-HFICEGINFDL-PEVVGEAPS------------IPGVTHIGGDMFNS-IPA--AN 221 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~~D~-p~~~~~a~~------------~~ri~~~~~d~~~~-~p~--~D 221 (309)
.+..+|||||||+|.++..+++.+ |..+ ++++|+ +.+++.+++ .++++++.+|+.+. .+. .|
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~-VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFD 798 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQT-IIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVD 798 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCE-EEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCe-EEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCee
Confidence 356799999999999999999998 5567 999999 677777644 25799999999875 332 49
Q ss_pred eeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecccc
Q 021707 222 AIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 222 ~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
+|++..++|++++.+..++++++++.|+|| .++|..+..
T Consensus 799 lVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 799 IGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred EEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 999999999999998889999999999999 777766543
No 104
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.16 E-value=3.8e-11 Score=107.98 Aligned_cols=94 Identities=15% Similarity=0.169 Sum_probs=77.9
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCCCCC--Cceeeehhh
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNSIPA--ANAIFMKWV 228 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~~p~--~D~i~~~~v 228 (309)
...+.+|||||||+|.++..++.+.++.+ ++++|. |.+++.|+++ ++++++.+|..+. |. +|+|++...
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~-V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l-~d~~FDvV~~~a~ 197 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMR-VNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVI-DGLEFDVLMVAAL 197 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCE-EEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGG-GGCCCSEEEECTT
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCE-EEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhC-CCCCcCEEEECCC
Confidence 66788999999999988877777778999 999999 7888887753 7899999999763 33 499997654
Q ss_pred hhcCChhHHHHHHHHHHHhcCCCcEEEEec
Q 021707 229 LATWTDDECKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 229 lh~~~d~~~~~iL~~~~~aL~pgG~l~i~e 258 (309)
.++ -.+++++++++|+|||++++.+
T Consensus 198 ---~~d--~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 198 ---AEP--KRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp ---CSC--HHHHHHHHHHHCCTTCEEEEEE
T ss_pred ---ccC--HHHHHHHHHHHcCCCcEEEEEc
Confidence 233 3689999999999999999987
No 105
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.16 E-value=3.5e-11 Score=105.91 Aligned_cols=99 Identities=15% Similarity=0.096 Sum_probs=79.9
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcC-CCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCC---CC---CCce
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHH-FICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNS---IP---AANA 222 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~---~p---~~D~ 222 (309)
..+..+|||||||+|..+..+++.+| +.+ ++++|. +.+++.++++ ++|+++.+|+.+. .+ ..|+
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~ 139 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQ-LLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDL 139 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCE-EEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSE
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEE
Confidence 34567999999999999999999998 788 999999 7777766542 5899999998653 22 2499
Q ss_pred eeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccC
Q 021707 223 IFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLL 262 (309)
Q Consensus 223 i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~ 262 (309)
|++.. +.......|+++++.|+|||.|++.+....
T Consensus 140 V~~d~-----~~~~~~~~l~~~~~~LkpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 140 IFIDA-----DKPNNPHYLRWALRYSRPGTLIIGDNVVRD 174 (248)
T ss_dssp EEECS-----CGGGHHHHHHHHHHTCCTTCEEEEECCSGG
T ss_pred EEECC-----chHHHHHHHHHHHHhcCCCeEEEEeCCCcC
Confidence 98744 344557899999999999999998887765
No 106
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.16 E-value=2.4e-11 Score=110.24 Aligned_cols=98 Identities=11% Similarity=0.101 Sum_probs=74.9
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-----C-------CceEEeCCCCC---------CC
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-----P-------GVTHIGGDMFN---------SI 217 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-----~-------ri~~~~~d~~~---------~~ 217 (309)
...+|||||||+|..+..+++.. ..+ ++++|+ +.+++.|+++ . ++++...|+.. +.
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~-~~~-v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE-IAL-LVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT-CSE-EEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC-CCe-EEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 35799999999998776666542 456 999999 7788887653 1 26788888732 23
Q ss_pred CC--CceeeehhhhhcC-ChhHHHHHHHHHHHhcCCCcEEEEecc
Q 021707 218 PA--ANAIFMKWVLATW-TDDECKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 218 p~--~D~i~~~~vlh~~-~d~~~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
+. .|+|++..++|+. .+++..++|++++++|+|||++++..+
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 33 4999999999984 544567999999999999999988765
No 107
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.15 E-value=5.7e-12 Score=107.16 Aligned_cols=111 Identities=14% Similarity=0.012 Sum_probs=70.7
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-----CCceEEeCCCCCCCC----
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-----PGVTHIGGDMFNSIP---- 218 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-----~ri~~~~~d~~~~~p---- 218 (309)
..+++.+....+..+|||+|||+|.++..+++.+|+.+ ++++|. +.+++.++++ .+++++.+|+.++++
T Consensus 19 ~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~ 97 (215)
T 4dzr_A 19 EEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVS-VTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAE 97 (215)
T ss_dssp HHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEE-EEEEECC-------------------CCHHHHHHHHHHHHH
T ss_pred HHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCe-EEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhh
Confidence 34455543125678999999999999999999999989 999999 7788888764 168888899876533
Q ss_pred --C-Cceeeehhhh------hcCChhHH------------------HHHHHHHHHhcCCCcEEEEeccc
Q 021707 219 --A-ANAIFMKWVL------ATWTDDEC------------------KLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 219 --~-~D~i~~~~vl------h~~~d~~~------------------~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
. .|+|+++... +++++... .++++++++.|+|||++++.+..
T Consensus 98 ~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 98 RGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp TTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred ccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 3 4999985333 33333222 68999999999999996666554
No 108
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.14 E-value=6.3e-11 Score=102.86 Aligned_cols=106 Identities=11% Similarity=0.028 Sum_probs=75.0
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeech--hHHhhC---CCC------CCceEEeCCCCCCC
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLP--EVVGEA---PSI------PGVTHIGGDMFNSI 217 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p--~~~~~a---~~~------~ri~~~~~d~~~~~ 217 (309)
..+.+.+ .....+|||||||+|.++..+++.+|+.+ ++++|++ .+++.| +++ ++++++.+|+.+.
T Consensus 15 ~~~~~~~--~~~~~~vLDiGCG~G~~~~~la~~~~~~~-v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l- 90 (225)
T 3p2e_A 15 DELTEII--GQFDRVHIDLGTGDGRNIYKLAINDQNTF-YIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESL- 90 (225)
T ss_dssp HHHHHHH--TTCSEEEEEETCTTSHHHHHHHHTCTTEE-EEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBC-
T ss_pred HHHHHHh--CCCCCEEEEEeccCcHHHHHHHHhCCCCE-EEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHh-
Confidence 3444444 24567999999999999999999999999 9999984 454443 442 6799999998654
Q ss_pred CC--CceeeehhhhhcCChh------HHHHHHHHHHHhcCCCcEEEEec
Q 021707 218 PA--ANAIFMKWVLATWTDD------ECKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 218 p~--~D~i~~~~vlh~~~d~------~~~~iL~~~~~aL~pgG~l~i~e 258 (309)
|. .|.|.+.++.+.|+.. +...+|++++++|+|||++++..
T Consensus 91 ~~~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 91 PFELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp CGGGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 43 2544443333333321 11468999999999999999943
No 109
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.14 E-value=1.9e-10 Score=99.82 Aligned_cols=94 Identities=17% Similarity=0.240 Sum_probs=75.3
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhh----CCCCCCceEEeCCCCC----C-CCC-Cceeeeh
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGE----APSIPGVTHIGGDMFN----S-IPA-ANAIFMK 226 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~----a~~~~ri~~~~~d~~~----~-~p~-~D~i~~~ 226 (309)
.....+|||+|||+|.++..+++.+|..+ ++++|. +.+++. ++..++++++.+|+.+ . .+. .|+|+
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~-- 148 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGI-VYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIY-- 148 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSE-EEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEE--
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcE-EEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEE--
Confidence 55678999999999999999999988777 999998 566644 3445889999999976 2 333 49988
Q ss_pred hhhhcCChh-HHHHHHHHHHHhcCCCcEEEEe
Q 021707 227 WVLATWTDD-ECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 227 ~vlh~~~d~-~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
|++++. +...+|+++++.|+|||++++.
T Consensus 149 ---~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 149 ---EDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp ---ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---EecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 555543 3457799999999999999996
No 110
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.14 E-value=9.8e-11 Score=102.84 Aligned_cols=101 Identities=15% Similarity=0.101 Sum_probs=81.1
Q ss_pred CcceEEEecCCccHHHHHHHHh--cCCCceEEEeec-hhHHhhCCCC---C-------C---------------------
Q 021707 160 GVKRLVDVGGSAGDCLRMILQK--HHFICEGINFDL-PEVVGEAPSI---P-------G--------------------- 205 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~--~p~~~~~~~~D~-p~~~~~a~~~---~-------r--------------------- 205 (309)
...+|||+|||+|.++..+++. +|..+ ++++|+ +.+++.++++ . +
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~-v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQ-VIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEE-EEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCe-EEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 4579999999999999999998 78788 999999 7777776632 2 2
Q ss_pred ----ce-------------EEeCCCCCCC------CC--CceeeehhhhhcCCh-------hHHHHHHHHHHHhcCCCcE
Q 021707 206 ----VT-------------HIGGDMFNSI------PA--ANAIFMKWVLATWTD-------DECKLIMENCYKALLAGGK 253 (309)
Q Consensus 206 ----i~-------------~~~~d~~~~~------p~--~D~i~~~~vlh~~~d-------~~~~~iL~~~~~aL~pgG~ 253 (309)
++ ++.+|+++.. +. .|+|+++..++...+ +...++++++++.|+|||+
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 209 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAV 209 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCE
T ss_pred hhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcE
Confidence 77 9999998864 33 499999876665443 5667999999999999999
Q ss_pred EEEecccc
Q 021707 254 LIACEPVL 261 (309)
Q Consensus 254 l~i~e~~~ 261 (309)
+++++...
T Consensus 210 l~~~~~~~ 217 (250)
T 1o9g_A 210 IAVTDRSR 217 (250)
T ss_dssp EEEEESSS
T ss_pred EEEeCcch
Confidence 99865443
No 111
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.14 E-value=5.5e-11 Score=102.19 Aligned_cols=97 Identities=13% Similarity=0.208 Sum_probs=75.0
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC------CCCceEEeCCCCCC---CCC--Cceeeehh
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS------IPGVTHIGGDMFNS---IPA--ANAIFMKW 227 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~------~~ri~~~~~d~~~~---~p~--~D~i~~~~ 227 (309)
...+|||||||+|.++..+++.+|+.+ ++++|. +.+++.+++ .++++++.+|+.+. ++. .|.|++.+
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~-v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDIN-YIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSE-EEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCC-EEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 356899999999999999999999999 999998 677776654 26899999998752 343 38887654
Q ss_pred hhhcCChh-------HHHHHHHHHHHhcCCCcEEEEec
Q 021707 228 VLATWTDD-------ECKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 228 vlh~~~d~-------~~~~iL~~~~~aL~pgG~l~i~e 258 (309)
... |+.. ...++|+++++.|+|||.+++..
T Consensus 117 ~~p-~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 117 SDP-WPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp CCC-CCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred CCC-CcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 322 2211 02578999999999999998863
No 112
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.13 E-value=1.4e-11 Score=107.24 Aligned_cols=100 Identities=16% Similarity=0.215 Sum_probs=77.4
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-----CCceEEeCCCCCC---CCC--Cceeee-h
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-----PGVTHIGGDMFNS---IPA--ANAIFM-K 226 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-----~ri~~~~~d~~~~---~p~--~D~i~~-~ 226 (309)
....+|||||||+|.++..+++..+. + ++++|. +.+++.++++ .+++++.+|+.+. ++. .|+|++ .
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~-~-v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~ 136 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPID-E-HWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDT 136 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEE-E-EEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCC-e-EEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECC
Confidence 35679999999999999999765443 6 999998 6777776542 6799999998653 443 499998 5
Q ss_pred hh--hhcCChhHHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 227 WV--LATWTDDECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 227 ~v--lh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
+. .+++...+...+|+++++.|+|||++++.+..
T Consensus 137 ~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 137 YPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp CCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred cccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 54 44555555668899999999999999998754
No 113
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.13 E-value=1.5e-10 Score=98.77 Aligned_cols=101 Identities=15% Similarity=0.173 Sum_probs=79.6
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------C-CceEEeCCCCCC---CC
Q 021707 150 SVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------P-GVTHIGGDMFNS---IP 218 (309)
Q Consensus 150 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~-ri~~~~~d~~~~---~p 218 (309)
.++..++ .....+|||||||+|.++..+++. ..+ ++++|. +.+++.++++ + +++++.+|+.+. .+
T Consensus 46 ~~l~~l~-~~~~~~vLDlGcG~G~~~~~la~~--~~~-v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~ 121 (204)
T 3njr_A 46 LTLAALA-PRRGELLWDIGGGSGSVSVEWCLA--GGR-AITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLP 121 (204)
T ss_dssp HHHHHHC-CCTTCEEEEETCTTCHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSC
T ss_pred HHHHhcC-CCCCCEEEEecCCCCHHHHHHHHc--CCE-EEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCC
Confidence 3455554 666789999999999999999988 677 999998 7777776642 4 899999999874 23
Q ss_pred CCceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecccc
Q 021707 219 AANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 219 ~~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
..|+|++...+ + .. +++++++.|+|||++++.....
T Consensus 122 ~~D~v~~~~~~----~--~~-~l~~~~~~LkpgG~lv~~~~~~ 157 (204)
T 3njr_A 122 LPEAVFIGGGG----S--QA-LYDRLWEWLAPGTRIVANAVTL 157 (204)
T ss_dssp CCSEEEECSCC----C--HH-HHHHHHHHSCTTCEEEEEECSH
T ss_pred CCCEEEECCcc----c--HH-HHHHHHHhcCCCcEEEEEecCc
Confidence 45999977643 2 23 9999999999999999876543
No 114
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.13 E-value=5.9e-11 Score=105.91 Aligned_cols=103 Identities=14% Similarity=0.101 Sum_probs=80.5
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHh-cCCCceEEEeec-hhHHhhCCC-------CCCceEEeCCCCCCCCC-
Q 021707 150 SVLDSYNGFKGVKRLVDVGGSAGDCLRMILQK-HHFICEGINFDL-PEVVGEAPS-------IPGVTHIGGDMFNSIPA- 219 (309)
Q Consensus 150 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~~D~-p~~~~~a~~-------~~ri~~~~~d~~~~~p~- 219 (309)
.+++.++ .....+|||+|||+|.++..+++. +|..+ ++++|. +.+++.+++ .++++++.+|+.+.++.
T Consensus 101 ~~~~~~~-~~~~~~VLD~G~G~G~~~~~la~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~ 178 (275)
T 1yb2_A 101 YIIMRCG-LRPGMDILEVGVGSGNMSSYILYALNGKGT-LTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQ 178 (275)
T ss_dssp -----CC-CCTTCEEEEECCTTSHHHHHHHHHHTTSSE-EEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSC
T ss_pred HHHHHcC-CCCcCEEEEecCCCCHHHHHHHHHcCCCCE-EEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCC
Confidence 4555554 667789999999999999999998 78888 999999 667766543 25899999999887654
Q ss_pred -CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecccc
Q 021707 220 -ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 220 -~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
.|+|++ ++++. .++|+++++.|+|||++++..+..
T Consensus 179 ~fD~Vi~-----~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 179 MYDAVIA-----DIPDP--WNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp CEEEEEE-----CCSCG--GGSHHHHHHTEEEEEEEEEEESSH
T ss_pred CccEEEE-----cCcCH--HHHHHHHHHHcCCCCEEEEEeCCH
Confidence 499998 44544 489999999999999999987544
No 115
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.13 E-value=1.4e-10 Score=99.38 Aligned_cols=96 Identities=16% Similarity=0.237 Sum_probs=76.2
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCC---CCC--Cceeeehh
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNS---IPA--ANAIFMKW 227 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~---~p~--~D~i~~~~ 227 (309)
...+|||||||+|.++..+++.+|+.+ ++++|. +.+++.++++ ++++++.+|+.+. ++. .|+|++.+
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~-v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDIN-YIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSE-EEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCC-EEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEEC
Confidence 356899999999999999999999999 999998 6777776542 6899999999762 333 49999875
Q ss_pred hhhcCChh-------HHHHHHHHHHHhcCCCcEEEEe
Q 021707 228 VLATWTDD-------ECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 228 vlh~~~d~-------~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
..+ |+.. ...++|+++++.|+|||.+++.
T Consensus 120 ~~~-~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (214)
T 1yzh_A 120 SDP-WPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK 155 (214)
T ss_dssp CCC-CCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred CCC-ccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence 432 2211 1257999999999999999885
No 116
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.13 E-value=1.1e-11 Score=108.43 Aligned_cols=97 Identities=14% Similarity=0.121 Sum_probs=75.2
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC-----CCCceEEeCCCCC---CCCC--Cceee---
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS-----IPGVTHIGGDMFN---SIPA--ANAIF--- 224 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~-----~~ri~~~~~d~~~---~~p~--~D~i~--- 224 (309)
..+.+|||||||+|..+..+++..|. + ++++|+ |.+++.+++ ..+++++.+|... .++. .|.|+
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~-~-v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~ 136 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPID-E-HWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDT 136 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEE-E-EEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCc-E-EEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEee
Confidence 45689999999999999999988774 6 899998 788888764 2568888888643 2443 36665
Q ss_pred --ehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecc
Q 021707 225 --MKWVLATWTDDECKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 225 --~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
..+.++++++. ..++++++++|||||++++.+.
T Consensus 137 ~~~~~~~~~~~~~--~~~~~e~~rvLkPGG~l~f~~~ 171 (236)
T 3orh_A 137 YPLSEETWHTHQF--NFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CCCBGGGTTTHHH--HHHHHTHHHHEEEEEEEEECCH
T ss_pred eecccchhhhcch--hhhhhhhhheeCCCCEEEEEec
Confidence 45666666655 5899999999999999998763
No 117
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.13 E-value=3.6e-11 Score=105.69 Aligned_cols=104 Identities=15% Similarity=0.187 Sum_probs=84.5
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHh-cCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCCCCC
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQK-HHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNSIPA 219 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~~p~ 219 (309)
..++..++ .....+|||+|||+|.++..+++. .|..+ ++++|. +.+++.++++ ++++++.+|+.+.++.
T Consensus 83 ~~i~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~~~~~~-v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 160 (255)
T 3mb5_A 83 ALIVAYAG-ISPGDFIVEAGVGSGALTLFLANIVGPEGR-VVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEE 160 (255)
T ss_dssp HHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSE-EEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCC
T ss_pred HHHHHhhC-CCCCCEEEEecCCchHHHHHHHHHhCCCeE-EEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCC
Confidence 34556664 667789999999999999999999 78889 999999 6777777652 5699999999877665
Q ss_pred --CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecccc
Q 021707 220 --ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 220 --~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
.|+|++ ++++. .++|+++++.|+|||++++..+..
T Consensus 161 ~~~D~v~~-----~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~ 197 (255)
T 3mb5_A 161 ENVDHVIL-----DLPQP--ERVVEHAAKALKPGGFFVAYTPCS 197 (255)
T ss_dssp CSEEEEEE-----CSSCG--GGGHHHHHHHEEEEEEEEEEESSH
T ss_pred CCcCEEEE-----CCCCH--HHHHHHHHHHcCCCCEEEEEECCH
Confidence 499987 34544 478999999999999999987544
No 118
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.12 E-value=5.5e-11 Score=114.44 Aligned_cols=106 Identities=14% Similarity=0.074 Sum_probs=85.8
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCCC-------CCceEEeCCCCCC-CCC
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPSI-------PGVTHIGGDMFNS-IPA 219 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~~-------~ri~~~~~d~~~~-~p~ 219 (309)
.+.+++.++ ..+..+|||||||+|.++..+++ .+..+ ++++|.+.+++.+++. ++|+++.+|+.+. .|+
T Consensus 147 ~~~il~~l~-~~~~~~VLDiGcGtG~la~~la~-~~~~~-V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~ 223 (480)
T 3b3j_A 147 QRAILQNHT-DFKDKIVLDVGCGSGILSFFAAQ-AGARK-IYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPE 223 (480)
T ss_dssp HHHHHHTGG-GTTTCEEEEESCSTTHHHHHHHH-TTCSE-EEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSS
T ss_pred HHHHHHhhh-hcCCCEEEEecCcccHHHHHHHH-cCCCE-EEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccCC
Confidence 344556554 45567999999999999998887 56778 9999997677666531 7899999999873 555
Q ss_pred -CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEE
Q 021707 220 -ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIA 256 (309)
Q Consensus 220 -~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i 256 (309)
.|+|++...+|++.+++..+.+.++++.|+|||++++
T Consensus 224 ~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 224 QVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp CEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred CeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 4999998888888877778889999999999999884
No 119
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.12 E-value=3.7e-11 Score=111.05 Aligned_cols=105 Identities=14% Similarity=0.078 Sum_probs=83.9
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCCC-------CCceEEeCCCCCC-CCC-C
Q 021707 150 SVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPSI-------PGVTHIGGDMFNS-IPA-A 220 (309)
Q Consensus 150 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~~-------~ri~~~~~d~~~~-~p~-~ 220 (309)
.+++.+. ..+..+|||||||+|.++..+++. +..+ ++++|.+++++.+++. ++++++.+|+.+. .|+ .
T Consensus 41 ~i~~~l~-~~~~~~VLDiGcGtG~ls~~la~~-g~~~-V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~ 117 (348)
T 2y1w_A 41 AILQNHT-DFKDKIVLDVGCGSGILSFFAAQA-GARK-IYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQV 117 (348)
T ss_dssp HHHHTGG-GTTTCEEEEETCTTSHHHHHHHHT-TCSE-EEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCE
T ss_pred HHHhccc-cCCcCEEEEcCCCccHHHHHHHhC-CCCE-EEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCce
Confidence 3455554 445679999999999999998876 5567 9999996666655431 6899999999874 454 4
Q ss_pred ceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEe
Q 021707 221 NAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 221 D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
|+|++...++++..+...+.+.++++.|+|||++++.
T Consensus 118 D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 118 DIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred eEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 9999998888888777788899999999999998844
No 120
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.12 E-value=1.3e-10 Score=99.25 Aligned_cols=99 Identities=16% Similarity=0.079 Sum_probs=76.7
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCCCCCceEEeCCCCCC-CCC--Cceee
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPSIPGVTHIGGDMFNS-IPA--ANAIF 224 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~~~ri~~~~~d~~~~-~p~--~D~i~ 224 (309)
...+++.+.......+|||||||+|.++..+. .+ ++++|.... +++++.+|+.+. ++. .|+|+
T Consensus 55 ~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~-----~~-v~~~D~s~~--------~~~~~~~d~~~~~~~~~~fD~v~ 120 (215)
T 2zfu_A 55 VDRIARDLRQRPASLVVADFGCGDCRLASSIR-----NP-VHCFDLASL--------DPRVTVCDMAQVPLEDESVDVAV 120 (215)
T ss_dssp HHHHHHHHHTSCTTSCEEEETCTTCHHHHHCC-----SC-EEEEESSCS--------STTEEESCTTSCSCCTTCEEEEE
T ss_pred HHHHHHHHhccCCCCeEEEECCcCCHHHHHhh-----cc-EEEEeCCCC--------CceEEEeccccCCCCCCCEeEEE
Confidence 34455554324456799999999999998873 46 999998543 788999999774 443 39999
Q ss_pred ehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 225 MKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 225 ~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
+.+++| +++ ..++|+++++.|+|||++++.+.....
T Consensus 121 ~~~~l~-~~~--~~~~l~~~~~~L~~gG~l~i~~~~~~~ 156 (215)
T 2zfu_A 121 FCLSLM-GTN--IRDFLEEANRVLKPGGLLKVAEVSSRF 156 (215)
T ss_dssp EESCCC-SSC--HHHHHHHHHHHEEEEEEEEEEECGGGC
T ss_pred Eehhcc-ccC--HHHHHHHHHHhCCCCeEEEEEEcCCCC
Confidence 999998 443 468999999999999999999876543
No 121
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.11 E-value=1.1e-10 Score=100.41 Aligned_cols=91 Identities=21% Similarity=0.188 Sum_probs=76.2
Q ss_pred cceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCCCCceEEeCCCCCC-CCC--CceeeehhhhhcCChhH
Q 021707 161 VKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSIPGVTHIGGDMFNS-IPA--ANAIFMKWVLATWTDDE 236 (309)
Q Consensus 161 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~~ri~~~~~d~~~~-~p~--~D~i~~~~vlh~~~d~~ 236 (309)
..+|||||||+|.++..+++. +++|. +.+++.+++. +++++.+|+.+. .+. .|+|++.+++|++++.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~- 118 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR-GVFVLKGTAENLPLKDESFDFALMVTTICFVDDP- 118 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT-TCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCH-
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc-CCEEEEcccccCCCCCCCeeEEEEcchHhhccCH-
Confidence 679999999999999988654 78888 6777777665 899999998664 433 4999999999999766
Q ss_pred HHHHHHHHHHhcCCCcEEEEecccc
Q 021707 237 CKLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 237 ~~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
.++|++++++|+|||++++.++..
T Consensus 119 -~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 119 -ERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp -HHHHHHHHHHEEEEEEEEEEEECS
T ss_pred -HHHHHHHHHHcCCCcEEEEEEeCC
Confidence 589999999999999999987643
No 122
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.11 E-value=9.1e-12 Score=110.50 Aligned_cols=100 Identities=15% Similarity=0.099 Sum_probs=75.0
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC----------------------------------
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI---------------------------------- 203 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~---------------------------------- 203 (309)
.++.+|||||||+|.++..++.... .+ ++++|. +.+++.++++
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~-~~-v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSF-QD-ITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTE-EE-EEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhh-cc-eeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 3567999999999988776554432 25 999998 6777765431
Q ss_pred -CCce-EEeCCCCCCC-------CCCceeeehhhhhcC-C-hhHHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 204 -PGVT-HIGGDMFNSI-------PAANAIFMKWVLATW-T-DDECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 204 -~ri~-~~~~d~~~~~-------p~~D~i~~~~vlh~~-~-d~~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
.++. ++.+|+.+.. +..|+|+++.+||+. + .++..++|++++++|||||++++.+..
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 1233 8899998741 224999999999985 3 256678999999999999999999754
No 123
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.11 E-value=1.9e-11 Score=102.70 Aligned_cols=95 Identities=12% Similarity=0.085 Sum_probs=77.4
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCC-CCC-Cceeeehhh
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNS-IPA-ANAIFMKWV 228 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~-~p~-~D~i~~~~v 228 (309)
....+|||+|||+|.++..+....|+++ +++.|. +.+++.++++ .++++ .|..+. .+. +|+|+...+
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~-~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa~k~ 124 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKII-YHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFLLKM 124 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCE-EEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEEETC
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCE-EEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhHhhH
Confidence 3568999999999999999999999998 999999 7788877653 24555 566544 333 499999999
Q ss_pred hhcCChhHHHHHHHHHHHhcCCCcEEEEec
Q 021707 229 LATWTDDECKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 229 lh~~~d~~~~~iL~~~~~aL~pgG~l~i~e 258 (309)
+|.+ ++ ....+.+++++|+|||.++-.+
T Consensus 125 LHlL-~~-~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 125 LPVL-KQ-QDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHHH-HH-TTCCHHHHHHTCEEEEEEEEEE
T ss_pred HHhh-hh-hHHHHHHHHHHhCCCCEEEEeC
Confidence 9999 33 3566779999999999888887
No 124
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.10 E-value=9.2e-11 Score=103.55 Aligned_cols=97 Identities=15% Similarity=0.175 Sum_probs=75.8
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCCCCceEEeCCCCCC-CCC--CceeeehhhhhcCChh
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSIPGVTHIGGDMFNS-IPA--ANAIFMKWVLATWTDD 235 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~~ri~~~~~d~~~~-~p~--~D~i~~~~vlh~~~d~ 235 (309)
...+|||||||+|.++..+++. ..+ ++++|. +.+++.+++...-.++.+|+.+. ++. .|+|++..+++++.++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~--~~~-v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~ 130 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER--GFE-VVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVEN 130 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT--TCE-EEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSC
T ss_pred CCCeEEEeCCCcCHHHHHHHHc--CCe-EEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhcccc
Confidence 5679999999999999999987 457 999998 67777776432223888898764 443 3999998766655332
Q ss_pred HHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 236 ECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 236 ~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
..++|+++++.|+|||++++..+.
T Consensus 131 -~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 131 -KDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp -HHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred -HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 579999999999999999987654
No 125
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.10 E-value=1.5e-11 Score=108.28 Aligned_cols=100 Identities=17% Similarity=0.155 Sum_probs=79.4
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC----C-----------------------------
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI----P----------------------------- 204 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~----~----------------------------- 204 (309)
.+..+|||||||+|.++..+++..+ .+ ++++|. +.+++.+++. .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~-v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-TE-IIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-EE-EEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-Ce-EEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 4567999999999999999988766 46 999998 6677766431 1
Q ss_pred --Cc-eEEeCCCCCCC--C----C-CceeeehhhhhcCChh--HHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 205 --GV-THIGGDMFNSI--P----A-ANAIFMKWVLATWTDD--ECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 205 --ri-~~~~~d~~~~~--p----~-~D~i~~~~vlh~~~d~--~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
++ +++.+|+.+.. + . .|+|++..++|++++. +..++|+++++.|+|||++++.+..
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 27 99999998742 2 3 4999999999955432 5679999999999999999998854
No 126
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.10 E-value=1.3e-10 Score=103.64 Aligned_cols=107 Identities=19% Similarity=0.189 Sum_probs=83.2
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCCCC-C-
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNSIP-A- 219 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~~p-~- 219 (309)
..+++.++ .+..+|||||||+|.++..+++.+|+.+ ++++|. +.+++.++++ ++++++.+|+++..+ .
T Consensus 100 ~~~l~~~~--~~~~~vLDlG~GsG~~~~~la~~~~~~~-v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~ 176 (276)
T 2b3t_A 100 EQALARLP--EQPCRILDLGTGTGAIALALASERPDCE-IIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQ 176 (276)
T ss_dssp HHHHHHSC--SSCCEEEEETCTTSHHHHHHHHHCTTSE-EEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTTCC
T ss_pred HHHHHhcc--cCCCEEEEecCCccHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcccCC
Confidence 34444442 3457999999999999999999999999 999998 6777776643 579999999988653 3
Q ss_pred Cceeeeh-------------hhhhcCCh----------hHHHHHHHHHHHhcCCCcEEEEec
Q 021707 220 ANAIFMK-------------WVLATWTD----------DECKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 220 ~D~i~~~-------------~vlh~~~d----------~~~~~iL~~~~~aL~pgG~l~i~e 258 (309)
.|+|+++ .++++.|. +...++++++++.|+|||++++..
T Consensus 177 fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 177 FAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp EEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred ccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 4999987 34444332 345789999999999999998863
No 127
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.09 E-value=8.6e-11 Score=99.08 Aligned_cols=106 Identities=15% Similarity=0.114 Sum_probs=81.1
Q ss_pred CCCcceEEEecCCccHHHHHHHHhc-CCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCC---CCC-Cceee
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKH-HFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNS---IPA-ANAIF 224 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~---~p~-~D~i~ 224 (309)
.....+|||+|||+|.++..+++.+ |..+ ++++|. +.+++.++++ ++++++.+|+.+. .++ .|+|+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGR-VFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCE-EEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence 4456799999999999999999987 6778 999998 6777777643 6899999997653 233 49999
Q ss_pred ehhhhhc-------CChhHHHHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 225 MKWVLAT-------WTDDECKLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 225 ~~~vlh~-------~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
+...+.. ...++..++++++++.|+|||++++......+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~ 145 (197)
T 3eey_A 99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDT 145 (197)
T ss_dssp EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTT
T ss_pred EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCC
Confidence 7764411 123345679999999999999999987554433
No 128
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.09 E-value=3.7e-11 Score=102.07 Aligned_cols=92 Identities=11% Similarity=0.021 Sum_probs=75.2
Q ss_pred cceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCCCCC--Cceeeehhhhhc
Q 021707 161 VKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNSIPA--ANAIFMKWVLAT 231 (309)
Q Consensus 161 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~~p~--~D~i~~~~vlh~ 231 (309)
..+|||||||+|.++..+++.+|+.+ ++++|. +.+++.++++ ++++++.+|+.+..+. .|+|++..+
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~--- 141 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAH-FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAF--- 141 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSE-EEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSCS---
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCE-EEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEecc---
Confidence 57999999999999999999999999 999998 6677666542 4599999999876433 499997542
Q ss_pred CChhHHHHHHHHHHHhcCCCcEEEEecc
Q 021707 232 WTDDECKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 232 ~~d~~~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
.+ ..++++++++.|+|||++++...
T Consensus 142 -~~--~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 142 -AS--LNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp -SS--HHHHHHHHTTSEEEEEEEEEEES
T ss_pred -CC--HHHHHHHHHHhcCCCcEEEEEeC
Confidence 22 35899999999999999998754
No 129
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.08 E-value=1.7e-10 Score=100.87 Aligned_cols=98 Identities=9% Similarity=0.136 Sum_probs=72.7
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCC------------CCCCceEEeCCCCCC----CCC-C
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAP------------SIPGVTHIGGDMFNS----IPA-A 220 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~------------~~~ri~~~~~d~~~~----~p~-~ 220 (309)
.+..+|||||||+|.++..+++.+|+.+ ++++|. +.+++.++ ...+|+++.+|+.+. ++. .
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~-v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTL-ILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSE-EEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCe-EEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 4467899999999999999999999999 999999 66665442 236899999999763 333 3
Q ss_pred -ceeeehhhhhcCChh---H----HHHHHHHHHHhcCCCcEEEEec
Q 021707 221 -NAIFMKWVLATWTDD---E----CKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 221 -D~i~~~~vlh~~~d~---~----~~~iL~~~~~aL~pgG~l~i~e 258 (309)
|.|++.+.-. |... . ...+|++++++|+|||.|++..
T Consensus 124 ~D~v~~~~~dp-~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 124 LTKMFFLFPDP-HFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp EEEEEEESCC------------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEEeCCCc-hhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 8887643321 2110 0 1379999999999999998863
No 130
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.08 E-value=1.3e-10 Score=99.00 Aligned_cols=100 Identities=14% Similarity=0.138 Sum_probs=80.8
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC------CCCceEEeCCCCCCCCC--
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS------IPGVTHIGGDMFNSIPA-- 219 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~------~~ri~~~~~d~~~~~p~-- 219 (309)
..+++.++ ..+..+|||||||+|.++..+++. ..+ ++++|. +.+++.+++ .++++++.+|..+..+.
T Consensus 67 ~~~~~~l~-~~~~~~vLdiG~G~G~~~~~la~~--~~~-v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 142 (210)
T 3lbf_A 67 ARMTELLE-LTPQSRVLEIGTGSGYQTAILAHL--VQH-VCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARA 142 (210)
T ss_dssp HHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHH--SSE-EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGC
T ss_pred HHHHHhcC-CCCCCEEEEEcCCCCHHHHHHHHh--CCE-EEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCC
Confidence 44556664 667789999999999999999998 566 999998 677776654 25799999999876432
Q ss_pred -CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 220 -ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 220 -~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
.|+|++..++|++++ ++++.|+|||++++.-..
T Consensus 143 ~~D~i~~~~~~~~~~~--------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 143 PFDAIIVTAAPPEIPT--------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CEEEEEESSBCSSCCT--------HHHHTEEEEEEEEEEECS
T ss_pred CccEEEEccchhhhhH--------HHHHhcccCcEEEEEEcC
Confidence 499999999999886 478899999999987554
No 131
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.07 E-value=6e-11 Score=100.77 Aligned_cols=97 Identities=12% Similarity=0.044 Sum_probs=78.8
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCCCCC-Cceeeehhhhh
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNSIPA-ANAIFMKWVLA 230 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~~p~-~D~i~~~~vlh 230 (309)
....+|||||||+|.++..+++ .+..+ ++++|. +.+++.++++ .+++++.+|+.+..++ .|+|++...+|
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~-~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~~ 136 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHK-LGAKS-VLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAE 136 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHH-TTCSE-EEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCHH
T ss_pred cCCCEEEEECCCCCHHHHHHHH-CCCCE-EEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcHH
Confidence 3567999999999999999776 46667 999998 7777776542 3499999999876555 49999988776
Q ss_pred cCChhHHHHHHHHHHHhcCCCcEEEEeccccC
Q 021707 231 TWTDDECKLIMENCYKALLAGGKLIACEPVLL 262 (309)
Q Consensus 231 ~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~ 262 (309)
+ ..++++++++.|+|||++++.+....
T Consensus 137 ~-----~~~~l~~~~~~L~~gG~l~~~~~~~~ 163 (205)
T 3grz_A 137 I-----LLDLIPQLDSHLNEDGQVIFSGIDYL 163 (205)
T ss_dssp H-----HHHHGGGSGGGEEEEEEEEEEEEEGG
T ss_pred H-----HHHHHHHHHHhcCCCCEEEEEecCcc
Confidence 4 36889999999999999999776654
No 132
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.07 E-value=5.6e-10 Score=94.24 Aligned_cols=103 Identities=20% Similarity=0.191 Sum_probs=77.6
Q ss_pred HHhhcCCCCCcceEEEecCCccHHHHHHHHhcC--CCceEEEeechhHHhhCCCCCCceEEeCCCCCCC-----------
Q 021707 151 VLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHH--FICEGINFDLPEVVGEAPSIPGVTHIGGDMFNSI----------- 217 (309)
Q Consensus 151 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p--~~~~~~~~D~p~~~~~a~~~~ri~~~~~d~~~~~----------- 217 (309)
+.+.+..+....+|||||||+|.++..+++++| +.+ ++++|+.++ ...++++++.+|+.+..
T Consensus 13 ~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~-v~gvD~s~~----~~~~~v~~~~~d~~~~~~~~~~~~~~i~ 87 (201)
T 2plw_A 13 LDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNK-IIGIDKKIM----DPIPNVYFIQGEIGKDNMNNIKNINYID 87 (201)
T ss_dssp HHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEE-EEEEESSCC----CCCTTCEEEECCTTTTSSCCC-------
T ss_pred HHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCce-EEEEeCCcc----CCCCCceEEEccccchhhhhhccccccc
Confidence 444553245668999999999999999999998 678 999999663 12468999999997643
Q ss_pred ---------------CC--CceeeehhhhhcCC----hhH-----HHHHHHHHHHhcCCCcEEEEec
Q 021707 218 ---------------PA--ANAIFMKWVLATWT----DDE-----CKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 218 ---------------p~--~D~i~~~~vlh~~~----d~~-----~~~iL~~~~~aL~pgG~l~i~e 258 (309)
+. .|+|++...+|... +.. ..++|+++++.|+|||++++..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 88 NMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp ----CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 32 49999887766532 211 2358999999999999998754
No 133
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.07 E-value=3.3e-10 Score=92.77 Aligned_cols=108 Identities=19% Similarity=0.210 Sum_probs=83.0
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHhc-CCCceEEEeechhHHhhCCCCCCceEEeCCCCCC---------CCC
Q 021707 150 SVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKH-HFICEGINFDLPEVVGEAPSIPGVTHIGGDMFNS---------IPA 219 (309)
Q Consensus 150 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~~D~p~~~~~a~~~~ri~~~~~d~~~~---------~p~ 219 (309)
.+++.+.......+|||+|||+|.++..+++.+ |+.+ ++++|...++. .++++++.+|+.+. ++.
T Consensus 12 ~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~-v~~~D~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (180)
T 1ej0_A 12 EIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGR-IIACDLLPMDP----IVGVDFLQGDFRDELVMKALLERVGD 86 (180)
T ss_dssp HHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCE-EEEEESSCCCC----CTTEEEEESCTTSHHHHHHHHHHHTT
T ss_pred HHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCe-EEEEECccccc----cCcEEEEEcccccchhhhhhhccCCC
Confidence 344444323456799999999999999999995 7788 99999966322 27899999999764 343
Q ss_pred --CceeeehhhhhcCChhH---------HHHHHHHHHHhcCCCcEEEEeccccC
Q 021707 220 --ANAIFMKWVLATWTDDE---------CKLIMENCYKALLAGGKLIACEPVLL 262 (309)
Q Consensus 220 --~D~i~~~~vlh~~~d~~---------~~~iL~~~~~aL~pgG~l~i~e~~~~ 262 (309)
.|+|++...+|...... ..++++++++.|+|||++++.....+
T Consensus 87 ~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 87 SKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE 140 (180)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST
T ss_pred CceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 49999988888665431 15899999999999999998776443
No 134
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.07 E-value=2.5e-10 Score=100.20 Aligned_cols=103 Identities=13% Similarity=0.187 Sum_probs=83.4
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHh-cCCCceEEEeec-hhHHhhCCC-------CCCceEEeCCCCCC-CCC
Q 021707 150 SVLDSYNGFKGVKRLVDVGGSAGDCLRMILQK-HHFICEGINFDL-PEVVGEAPS-------IPGVTHIGGDMFNS-IPA 219 (309)
Q Consensus 150 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~~D~-p~~~~~a~~-------~~ri~~~~~d~~~~-~p~ 219 (309)
.++..++ .....+|||+|||+|.++..+++. .|..+ ++++|. +.+++.+++ .++++++.+|+.+. ++.
T Consensus 87 ~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~-v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~ 164 (258)
T 2pwy_A 87 AMVTLLD-LAPGMRVLEAGTGSGGLTLFLARAVGEKGL-VESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEE 164 (258)
T ss_dssp HHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSE-EEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCT
T ss_pred HHHHHcC-CCCCCEEEEECCCcCHHHHHHHHHhCCCCE-EEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC
Confidence 4666665 777789999999999999999999 67888 999998 677766653 26899999999876 554
Q ss_pred --CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecccc
Q 021707 220 --ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 220 --~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
.|+|++ ++++. .++|++++++|+|||++++..+..
T Consensus 165 ~~~D~v~~-----~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 165 AAYDGVAL-----DLMEP--WKVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp TCEEEEEE-----ESSCG--GGGHHHHHHHEEEEEEEEEEESCH
T ss_pred CCcCEEEE-----CCcCH--HHHHHHHHHhCCCCCEEEEEeCCH
Confidence 499997 34544 378999999999999999988543
No 135
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.07 E-value=1.7e-10 Score=98.69 Aligned_cols=100 Identities=16% Similarity=0.150 Sum_probs=81.3
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhc-CCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCCCC-C
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKH-HFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNSIP-A 219 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~~p-~ 219 (309)
..+++.+. .....+|||||||+|.++..+++.. |+.+ ++++|. +.+++.++++ ++++++.+|+....+ .
T Consensus 67 ~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 144 (215)
T 2yxe_A 67 GMMCELLD-LKPGMKVLEIGTGCGYHAAVTAEIVGEDGL-VVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPL 144 (215)
T ss_dssp HHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSE-EEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGG
T ss_pred HHHHHhhC-CCCCCEEEEECCCccHHHHHHHHHhCCCCE-EEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCC
Confidence 34555554 5667899999999999999999998 6678 999998 6777776542 579999999876654 2
Q ss_pred --CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEec
Q 021707 220 --ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 220 --~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e 258 (309)
.|+|++..++|++++ ++++.|+|||++++.-
T Consensus 145 ~~fD~v~~~~~~~~~~~--------~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 145 APYDRIYTTAAGPKIPE--------PLIRQLKDGGKLLMPV 177 (215)
T ss_dssp CCEEEEEESSBBSSCCH--------HHHHTEEEEEEEEEEE
T ss_pred CCeeEEEECCchHHHHH--------HHHHHcCCCcEEEEEE
Confidence 499999999998873 6889999999999874
No 136
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.05 E-value=1.9e-10 Score=100.89 Aligned_cols=94 Identities=12% Similarity=0.223 Sum_probs=71.8
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCC--------------CCCCceEEeCCCCCCCC----
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAP--------------SIPGVTHIGGDMFNSIP---- 218 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~--------------~~~ri~~~~~d~~~~~p---- 218 (309)
..+..+|||||||+|.++..+++.+|+.+ ++++|. +.+++.++ ..++++++.+|+++.++
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~-v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~ 125 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDL-ILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFE 125 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSE-EEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCC-EEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcc
Confidence 34567999999999999999999999999 999998 56665442 22689999999987433
Q ss_pred C--CceeeehhhhhcCChhH-----------HHHHHHHHHHhcCCCcEEEEe
Q 021707 219 A--ANAIFMKWVLATWTDDE-----------CKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 219 ~--~D~i~~~~vlh~~~d~~-----------~~~iL~~~~~aL~pgG~l~i~ 257 (309)
. .|.|++. +++.. ..++++++.+.|+|||+|++.
T Consensus 126 ~~~~d~v~~~-----~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 126 KGQLSKMFFC-----FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp TTCEEEEEEE-----SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccCEEEEE-----CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 2 2666532 23321 147999999999999999985
No 137
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.05 E-value=8.9e-11 Score=102.14 Aligned_cols=99 Identities=16% Similarity=0.170 Sum_probs=80.5
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCCCC----C-Cceeee
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNSIP----A-ANAIFM 225 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~~p----~-~D~i~~ 225 (309)
.+..+|||||||+|..+..+++.+|..+ ++++|. +.+++.++++ ++++++.+|+.+..| . .|+|++
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 148 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIH-VTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFI 148 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCE-EEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEE
Confidence 4567999999999999999999889888 999998 7777776542 589999999987644 3 499986
Q ss_pred hhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 226 KWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 226 ~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
... ......+++++++.|+|||+|++.+.+++.
T Consensus 149 ~~~-----~~~~~~~l~~~~~~LkpgG~lv~d~~~~~g 181 (232)
T 3ntv_A 149 DAA-----KAQSKKFFEIYTPLLKHQGLVITDNVLYHG 181 (232)
T ss_dssp ETT-----SSSHHHHHHHHGGGEEEEEEEEEECTTGGG
T ss_pred cCc-----HHHHHHHHHHHHHhcCCCeEEEEeeCCcCc
Confidence 532 334568999999999999999887776653
No 138
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.05 E-value=3.8e-10 Score=98.57 Aligned_cols=93 Identities=18% Similarity=0.118 Sum_probs=75.8
Q ss_pred cceEEEecCCccHHHHHHHHh----cCCCceEEEeec-hhHHhhCCC-CCCceEEeCCCCCC--C---CC--Cceeeehh
Q 021707 161 VKRLVDVGGSAGDCLRMILQK----HHFICEGINFDL-PEVVGEAPS-IPGVTHIGGDMFNS--I---PA--ANAIFMKW 227 (309)
Q Consensus 161 ~~~vlDvG~G~G~~~~~l~~~----~p~~~~~~~~D~-p~~~~~a~~-~~ri~~~~~d~~~~--~---p~--~D~i~~~~ 227 (309)
..+|||||||+|..+..+++. +|+.+ ++++|. +.+++.++. .++|+++.+|+.+. + +. .|+|++..
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~-V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQ-VIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCE-EEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCE-EEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 469999999999999999998 78889 999998 677777754 37899999999873 2 22 49988755
Q ss_pred hhhcCChhHHHHHHHHHHH-hcCCCcEEEEecc
Q 021707 228 VLATWTDDECKLIMENCYK-ALLAGGKLIACEP 259 (309)
Q Consensus 228 vlh~~~d~~~~~iL~~~~~-aL~pgG~l~i~e~ 259 (309)
. |. +..++|+++++ .|+|||++++.+.
T Consensus 161 ~-~~----~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 161 A-HA----NTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp S-CS----SHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred c-hH----hHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 4 42 34689999997 9999999999875
No 139
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.04 E-value=1.2e-10 Score=100.24 Aligned_cols=98 Identities=15% Similarity=0.102 Sum_probs=79.0
Q ss_pred CCcceEEEecCCccHHHHHHHHhcC-CCceEEEeec-hhHHhhCCC-------CCCceEEeCCCCCCC--------CCCc
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHH-FICEGINFDL-PEVVGEAPS-------IPGVTHIGGDMFNSI--------PAAN 221 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~~D~-p~~~~~a~~-------~~ri~~~~~d~~~~~--------p~~D 221 (309)
.+..+|||||||+|..+..+++.+| +.+ ++++|. +.+++.+++ .++++++.+|+.+.. ...|
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGR-VVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 3567999999999999999999998 778 999998 777776653 257999999986532 1259
Q ss_pred eeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccC
Q 021707 222 AIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLL 262 (309)
Q Consensus 222 ~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~ 262 (309)
+|++... ......+++++.+.|+|||.+++.+..++
T Consensus 136 ~v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 136 FIFIDAD-----KQNNPAYFEWALKLSRPGTVIIGDNVVRE 171 (223)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHTCCTTCEEEEESCSGG
T ss_pred EEEEcCC-----cHHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 9987543 33456899999999999999998887765
No 140
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.04 E-value=4.1e-11 Score=107.47 Aligned_cols=99 Identities=16% Similarity=0.163 Sum_probs=72.9
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC--------------C--------------------
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI--------------P-------------------- 204 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~--------------~-------------------- 204 (309)
...+|||||||+|.++ .++...+..+ ++++|+ +.+++.+++. .
T Consensus 71 ~~~~vLDiGcG~G~~~-~l~~~~~~~~-v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQ-LLSACSHFED-ITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGG-GTTGGGGCSE-EEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHH-HHhhccCCCe-EEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 4579999999999944 3444444557 999998 6677655431 0
Q ss_pred --CceEEeCCCCCC-------CCC--CceeeehhhhhcCChh--HHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 205 --GVTHIGGDMFNS-------IPA--ANAIFMKWVLATWTDD--ECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 205 --ri~~~~~d~~~~-------~p~--~D~i~~~~vlh~~~d~--~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
.++++.+|+.+. ++. .|+|++..++|++++. +..++|++++++|+|||+|++.+..
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~ 217 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGAL 217 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 145666788762 222 4999999999985543 5679999999999999999998643
No 141
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.04 E-value=3.2e-10 Score=95.11 Aligned_cols=101 Identities=8% Similarity=-0.043 Sum_probs=79.6
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCC---C-CC-Cceeeehh
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNS---I-PA-ANAIFMKW 227 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~---~-p~-~D~i~~~~ 227 (309)
...+|||+|||+|.++..+++. +..+ ++++|. +.+++.++++ ++++++.+|+.+. . ++ .|+|++..
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~-~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSR-GAAS-VLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSE-EEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCEEEEeCCCcCHHHHHHHHC-CCCe-EEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECC
Confidence 4579999999999999988774 4556 999998 7788777653 5899999998764 2 23 49999987
Q ss_pred hhhcCChhHHHHHHHHHHH--hcCCCcEEEEeccccCC
Q 021707 228 VLATWTDDECKLIMENCYK--ALLAGGKLIACEPVLLD 263 (309)
Q Consensus 228 vlh~~~d~~~~~iL~~~~~--aL~pgG~l~i~e~~~~~ 263 (309)
.+|.. .++..++++++.+ .|+|||++++.......
T Consensus 122 p~~~~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 122 PYNVD-SADVDAILAALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp CTTSC-HHHHHHHHHHHHHSSSCCTTCEEEEEEETTSC
T ss_pred CCCcc-hhhHHHHHHHHHhcCccCCCeEEEEEecCCCC
Confidence 76543 3556799999999 99999999987665443
No 142
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.02 E-value=1.2e-10 Score=100.46 Aligned_cols=101 Identities=15% Similarity=0.257 Sum_probs=79.7
Q ss_pred CCcceEEEecCCccHHHHHHHHhcC-CCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCC---CC------CC
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHH-FICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNS---IP------AA 220 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~---~p------~~ 220 (309)
.+..+|||||||+|..+..+++..+ +.+ ++++|. +.+++.++++ ++|+++.+|+.+. .+ ..
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGAR-LLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCE-EEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCE-EEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 3467999999999999999999875 778 999998 7778777652 5799999997442 32 25
Q ss_pred ceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 221 NAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 221 D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
|+|++....|.+.+. .++++.+ +.|+|||.+++.+...+.
T Consensus 136 D~V~~d~~~~~~~~~--~~~~~~~-~~LkpgG~lv~~~~~~~~ 175 (221)
T 3u81_A 136 DMVFLDHWKDRYLPD--TLLLEKC-GLLRKGTVLLADNVIVPG 175 (221)
T ss_dssp SEEEECSCGGGHHHH--HHHHHHT-TCCCTTCEEEESCCCCCC
T ss_pred EEEEEcCCcccchHH--HHHHHhc-cccCCCeEEEEeCCCCcc
Confidence 999998877766433 4678877 999999999888877554
No 143
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.02 E-value=2.7e-10 Score=99.08 Aligned_cols=102 Identities=23% Similarity=0.211 Sum_probs=81.8
Q ss_pred cHHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCCCCC
Q 021707 147 FMTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNSIPA 219 (309)
Q Consensus 147 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~~p~ 219 (309)
....+++.++ .....+|||||||+|.++..+++..+ .+ ++++|. +.+++.++++ ++++++.+|+...++.
T Consensus 79 ~~~~~~~~l~-~~~~~~vLdiG~G~G~~~~~la~~~~-~~-v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 155 (235)
T 1jg1_A 79 MVAIMLEIAN-LKPGMNILEVGTGSGWNAALISEIVK-TD-VYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPP 155 (235)
T ss_dssp HHHHHHHHHT-CCTTCCEEEECCTTSHHHHHHHHHHC-SC-EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG
T ss_pred HHHHHHHhcC-CCCCCEEEEEeCCcCHHHHHHHHHhC-CE-EEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCC
Confidence 3445666665 66778999999999999999999998 77 999997 6777766542 5699999998555543
Q ss_pred ---CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecc
Q 021707 220 ---ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 220 ---~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
.|+|++..+++++++ ++.+.|+|||++++.-.
T Consensus 156 ~~~fD~Ii~~~~~~~~~~--------~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 156 KAPYDVIIVTAGAPKIPE--------PLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp GCCEEEEEECSBBSSCCH--------HHHHTEEEEEEEEEEEC
T ss_pred CCCccEEEECCcHHHHHH--------HHHHhcCCCcEEEEEEe
Confidence 499999999998875 57889999999998643
No 144
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.02 E-value=1.6e-10 Score=109.04 Aligned_cols=106 Identities=18% Similarity=0.203 Sum_probs=81.4
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCCCCceEEeCCCCCC----C--C-C
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSIPGVTHIGGDMFNS----I--P-A 219 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~~ri~~~~~d~~~~----~--p-~ 219 (309)
...+++.+. .....+|||||||+|.++..++++. .+ ++++|. +.+++.+++. .+......+... + + +
T Consensus 96 ~~~l~~~~~-~~~~~~VLDiGcG~G~~~~~l~~~g--~~-v~gvD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~l~~~~~ 170 (416)
T 4e2x_A 96 ARDFLATEL-TGPDPFIVEIGCNDGIMLRTIQEAG--VR-HLGFEPSSGVAAKAREK-GIRVRTDFFEKATADDVRRTEG 170 (416)
T ss_dssp HHHHHHTTT-CSSSCEEEEETCTTTTTHHHHHHTT--CE-EEEECCCHHHHHHHHTT-TCCEECSCCSHHHHHHHHHHHC
T ss_pred HHHHHHHhC-CCCCCEEEEecCCCCHHHHHHHHcC--Cc-EEEECCCHHHHHHHHHc-CCCcceeeechhhHhhcccCCC
Confidence 456677775 6677899999999999999999874 46 999999 6788877765 344443222111 1 1 2
Q ss_pred -CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 220 -ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 220 -~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
.|+|++.+++|++++. ..+|+++++.|+|||++++..+.
T Consensus 171 ~fD~I~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 171 PANVIYAANTLCHIPYV--QSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp CEEEEEEESCGGGCTTH--HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CEEEEEECChHHhcCCH--HHHHHHHHHHcCCCeEEEEEeCC
Confidence 4999999999999865 68999999999999999997543
No 145
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.01 E-value=4.7e-10 Score=97.33 Aligned_cols=95 Identities=14% Similarity=0.176 Sum_probs=74.6
Q ss_pred CCCcceEEEecCCccHHHHHHHHhc-CCCceEEEeec-hh----HHhhCCCCCCceEEeCCCCCC--C---CC-Cceeee
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKH-HFICEGINFDL-PE----VVGEAPSIPGVTHIGGDMFNS--I---PA-ANAIFM 225 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~~D~-p~----~~~~a~~~~ri~~~~~d~~~~--~---p~-~D~i~~ 225 (309)
.....+|||+|||+|.++..+++.+ |..+ ++++|. +. +++.+++.++++++.+|+.+. + +. .|+|++
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~-v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~ 153 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGL-VYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFA 153 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCE-EEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcE-EEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEE
Confidence 4567799999999999999999997 7788 999998 33 445555558999999999873 2 22 499998
Q ss_pred hhhhhcCChhHHHHHHHHHHHhcCCCcEEEEe
Q 021707 226 KWVLATWTDDECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 226 ~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
... ..+....+++++++.|+|||++++.
T Consensus 154 ~~~----~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 154 DVA----QPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp CCC----CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCC----CccHHHHHHHHHHHHcCCCeEEEEE
Confidence 443 3334467799999999999999984
No 146
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.01 E-value=9.5e-10 Score=94.86 Aligned_cols=95 Identities=17% Similarity=0.187 Sum_probs=72.9
Q ss_pred CCCcceEEEecCCccHHHHHHHHhc-CCCceEEEeec-hhHHh----hCCCCCCceEEeCCCCCC-----CCC-Cceeee
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKH-HFICEGINFDL-PEVVG----EAPSIPGVTHIGGDMFNS-----IPA-ANAIFM 225 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~~D~-p~~~~----~a~~~~ri~~~~~d~~~~-----~p~-~D~i~~ 225 (309)
.....+|||+|||+|.++..+++.+ |..+ ++++|. +.+++ .+++.++++++.+|+.+. .+. .|+|++
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~-v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~ 149 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGK-IFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFE 149 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSE-EEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeE-EEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEE
Confidence 4566799999999999999999886 5677 999998 54443 344457999999999872 233 499996
Q ss_pred hhhhhcCChhHHHHHHHHHHHhcCCCcEEEEe
Q 021707 226 KWVLATWTDDECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 226 ~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
... .......+++++++.|+|||++++.
T Consensus 150 ~~~----~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 150 DVA----QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CCC----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCC----CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 543 2233345599999999999999987
No 147
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.01 E-value=2.3e-10 Score=99.22 Aligned_cols=99 Identities=11% Similarity=0.157 Sum_probs=80.0
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCC---C--CC-Cceee
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNS---I--PA-ANAIF 224 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~---~--p~-~D~i~ 224 (309)
.+..+|||||||+|..+..+++.+|+.+ ++++|. +.+++.++++ ++++++.+|+.+. . +. .|+|+
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 131 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEAT-IVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLF 131 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCE-EEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEE
Confidence 3457999999999999999999999888 999998 6777766542 5799999999774 2 23 49999
Q ss_pred ehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 225 MKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 225 ~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
+....+ +..++|+++.+.|+|||++++.+..+..
T Consensus 132 ~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~~~~~g 165 (233)
T 2gpy_A 132 IDAAKG-----QYRRFFDMYSPMVRPGGLILSDNVLFRG 165 (233)
T ss_dssp EEGGGS-----CHHHHHHHHGGGEEEEEEEEEETTTC--
T ss_pred ECCCHH-----HHHHHHHHHHHHcCCCeEEEEEcCCcCC
Confidence 877654 3468999999999999999998766543
No 148
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.01 E-value=5.7e-10 Score=98.81 Aligned_cols=100 Identities=14% Similarity=0.148 Sum_probs=75.9
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC-------C---CCceEEeCCCCCC--------CC
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS-------I---PGVTHIGGDMFNS--------IP 218 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~-------~---~ri~~~~~d~~~~--------~p 218 (309)
.....+|||+|||+|.++..+++++|..+ ++++|. +.+++.+++ . ++++++.+|+.+. ++
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~-v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~ 112 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAE-VTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLP 112 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEE-EEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCC
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCe-EEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccC
Confidence 44567999999999999999999999988 999999 666665543 1 3699999999875 23
Q ss_pred C--Cceeeehhhhh----------------cCChhHHHHHHHHHHHhcCCCcEEEEec
Q 021707 219 A--ANAIFMKWVLA----------------TWTDDECKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 219 ~--~D~i~~~~vlh----------------~~~d~~~~~iL~~~~~aL~pgG~l~i~e 258 (309)
. .|+|+++-..+ +........+++.+++.|+|||+++++-
T Consensus 113 ~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 113 DEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp TTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 3 49999872222 1222235689999999999999998853
No 149
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.01 E-value=1.5e-10 Score=96.36 Aligned_cols=102 Identities=17% Similarity=0.130 Sum_probs=81.0
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCCCC---
Q 021707 150 SVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNSIP--- 218 (309)
Q Consensus 150 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~~p--- 218 (309)
.+++.++ .....+|||+|||+|.++..+++.+ .+ ++++|. +.+++.++++ ++++++.+|+.+.++
T Consensus 24 ~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~--~~-v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 99 (192)
T 1l3i_A 24 LIMCLAE-PGKNDVAVDVGCGTGGVTLELAGRV--RR-VYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIP 99 (192)
T ss_dssp HHHHHHC-CCTTCEEEEESCTTSHHHHHHHTTS--SE-EEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSC
T ss_pred HHHHhcC-CCCCCEEEEECCCCCHHHHHHHHhc--CE-EEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCC
Confidence 3445554 6667899999999999999999887 67 999998 6677666542 689999999866433
Q ss_pred CCceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 219 AANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 219 ~~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
..|+|++..++|++ .++|+++++.|+|||++++....
T Consensus 100 ~~D~v~~~~~~~~~-----~~~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 100 DIDIAVVGGSGGEL-----QEILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp CEEEEEESCCTTCH-----HHHHHHHHHTEEEEEEEEEEECB
T ss_pred CCCEEEECCchHHH-----HHHHHHHHHhcCCCcEEEEEecC
Confidence 35999998877543 68999999999999999998654
No 150
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.01 E-value=3.8e-10 Score=97.42 Aligned_cols=99 Identities=13% Similarity=0.095 Sum_probs=75.7
Q ss_pred CCCcceEEEecCC-ccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-----CCceEEeCCC--CCCCCC--Cceeeeh
Q 021707 158 FKGVKRLVDVGGS-AGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-----PGVTHIGGDM--FNSIPA--ANAIFMK 226 (309)
Q Consensus 158 ~~~~~~vlDvG~G-~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-----~ri~~~~~d~--~~~~p~--~D~i~~~ 226 (309)
..+..+|||+||| +|.++..+++.+ ..+ ++++|. +.+++.++++ .+++++.+|+ +..++. .|+|+++
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~-v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~n 130 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCK-VTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSA 130 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCE-EEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEEC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCE-EEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEEC
Confidence 4567899999999 999999999987 677 999998 6777776642 3799999996 344443 4999988
Q ss_pred hhhhcCChhH-----------------HHHHHHHHHHhcCCCcEEEEec
Q 021707 227 WVLATWTDDE-----------------CKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 227 ~vlh~~~d~~-----------------~~~iL~~~~~aL~pgG~l~i~e 258 (309)
-..+..++.+ ..++|+++++.|+|||++++.-
T Consensus 131 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 179 (230)
T 3evz_A 131 PPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYL 179 (230)
T ss_dssp CCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 6665544321 3689999999999999999864
No 151
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.01 E-value=3.2e-10 Score=93.75 Aligned_cols=100 Identities=17% Similarity=0.135 Sum_probs=79.2
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCCCCC--
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNSIPA-- 219 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~~p~-- 219 (309)
..+++.++ ..+..+|||+|||+|.++..+++ +..+ ++++|. +.+++.++++ ++++++.+|+.++++.
T Consensus 25 ~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~--~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (183)
T 2yxd_A 25 AVSIGKLN-LNKDDVVVDVGCGSGGMTVEIAK--RCKF-VYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDKLE 100 (183)
T ss_dssp HHHHHHHC-CCTTCEEEEESCCCSHHHHHHHT--TSSE-EEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGGCC
T ss_pred HHHHHHcC-CCCCCEEEEeCCCCCHHHHHHHh--cCCe-EEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccCCC
Confidence 34555554 55678999999999999999998 7778 999998 6777776543 6899999999776553
Q ss_pred CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 220 ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 220 ~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
.|+|++..+ .+..++++++++. |||++++....
T Consensus 101 ~D~i~~~~~------~~~~~~l~~~~~~--~gG~l~~~~~~ 133 (183)
T 2yxd_A 101 FNKAFIGGT------KNIEKIIEILDKK--KINHIVANTIV 133 (183)
T ss_dssp CSEEEECSC------SCHHHHHHHHHHT--TCCEEEEEESC
T ss_pred CcEEEECCc------ccHHHHHHHHhhC--CCCEEEEEecc
Confidence 599999887 2345789999888 99999998743
No 152
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.00 E-value=5.7e-10 Score=102.75 Aligned_cols=102 Identities=19% Similarity=0.217 Sum_probs=76.9
Q ss_pred HHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCCC-------CCceEEeCCCCCC-CC-C-C
Q 021707 151 VLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPSI-------PGVTHIGGDMFNS-IP-A-A 220 (309)
Q Consensus 151 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~~-------~ri~~~~~d~~~~-~p-~-~ 220 (309)
+.+... ..+..+|||||||+|.++..+++. +..+ ++++|..++++.++++ ++++++.+|+.+. +| + .
T Consensus 56 i~~~~~-~~~~~~VLDiGcGtG~ls~~la~~-g~~~-v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 132 (340)
T 2fyt_A 56 IYQNPH-IFKDKVVLDVGCGTGILSMFAAKA-GAKK-VLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKV 132 (340)
T ss_dssp HHHCGG-GTTTCEEEEETCTTSHHHHHHHHT-TCSE-EEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCE
T ss_pred HHhhhh-hcCCCEEEEeeccCcHHHHHHHHc-CCCE-EEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcE
Confidence 444443 456679999999999999999987 4457 9999996677776542 7899999999874 55 3 4
Q ss_pred ceeeehhhhhcC-ChhHHHHHHHHHHHhcCCCcEEE
Q 021707 221 NAIFMKWVLATW-TDDECKLIMENCYKALLAGGKLI 255 (309)
Q Consensus 221 D~i~~~~vlh~~-~d~~~~~iL~~~~~aL~pgG~l~ 255 (309)
|+|++..+.+.+ .......+|+++++.|+|||+++
T Consensus 133 D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 133 DVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 999976632222 23345689999999999999987
No 153
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.99 E-value=1e-10 Score=102.13 Aligned_cols=94 Identities=15% Similarity=0.087 Sum_probs=75.8
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCC-C----CC-Cceeee
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNS-I----PA-ANAIFM 225 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~-~----p~-~D~i~~ 225 (309)
....+|||||||+|..+..++...|+.+ ++++|. +.+++.++++ ++++++.+|+.+. . +. .|+|++
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLH-VTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTA 147 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCE-EEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCE-EEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEE
Confidence 4567999999999999999999889999 999998 6677776542 5799999988542 2 23 499998
Q ss_pred hhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecc
Q 021707 226 KWVLATWTDDECKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 226 ~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
..+ .+ ...+++.+++.|+|||++++.+.
T Consensus 148 ~~~----~~--~~~~l~~~~~~LkpgG~l~~~~g 175 (240)
T 1xdz_A 148 RAV----AR--LSVLSELCLPLVKKNGLFVALKA 175 (240)
T ss_dssp ECC----SC--HHHHHHHHGGGEEEEEEEEEEEC
T ss_pred ecc----CC--HHHHHHHHHHhcCCCCEEEEEeC
Confidence 663 32 46899999999999999998743
No 154
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.99 E-value=1.6e-10 Score=99.53 Aligned_cols=98 Identities=14% Similarity=0.083 Sum_probs=78.6
Q ss_pred CcceEEEecCCccHHHHHHHHhcC-CCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCCC---------CCCc
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHH-FICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNSI---------PAAN 221 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~~---------p~~D 221 (309)
+..+|||||||+|..+..+++.+| +.+ ++++|. +.+++.++++ ++++++.+|+.+.. ...|
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGT-LITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCE-EEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 457999999999999999999998 778 999998 6677766542 57999999986531 2249
Q ss_pred eeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 222 AIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 222 ~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
+|++.. +......+++++++.|+|||++++.+..++.
T Consensus 143 ~v~~~~-----~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g 179 (225)
T 3tr6_A 143 LIYIDA-----DKANTDLYYEESLKLLREGGLIAVDNVLRRG 179 (225)
T ss_dssp EEEECS-----CGGGHHHHHHHHHHHEEEEEEEEEECSSGGG
T ss_pred EEEECC-----CHHHHHHHHHHHHHhcCCCcEEEEeCCCcCC
Confidence 998544 3345578999999999999999998887653
No 155
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.99 E-value=5.1e-10 Score=96.70 Aligned_cols=100 Identities=15% Similarity=0.151 Sum_probs=80.2
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC----CCceEEeCCCCCCCC--C-
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI----PGVTHIGGDMFNSIP--A- 219 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~----~ri~~~~~d~~~~~p--~- 219 (309)
...+++.+. .....+|||||||+|.++..+++.. .+ ++++|. +.+++.++++ .+++++.+|+.+..+ .
T Consensus 59 ~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~--~~-v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~ 134 (231)
T 1vbf_A 59 GIFMLDELD-LHKGQKVLEIGTGIGYYTALIAEIV--DK-VVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKP 134 (231)
T ss_dssp HHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHS--SE-EEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCC
T ss_pred HHHHHHhcC-CCCCCEEEEEcCCCCHHHHHHHHHc--CE-EEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCC
Confidence 345566664 6667899999999999999999986 56 999998 6777766542 389999999987543 2
Q ss_pred CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecc
Q 021707 220 ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 220 ~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
.|+|++..++|++++ ++++.|+|||++++...
T Consensus 135 fD~v~~~~~~~~~~~--------~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 135 YDRVVVWATAPTLLC--------KPYEQLKEGGIMILPIG 166 (231)
T ss_dssp EEEEEESSBBSSCCH--------HHHHTEEEEEEEEEEEC
T ss_pred ccEEEECCcHHHHHH--------HHHHHcCCCcEEEEEEc
Confidence 499999999998874 47889999999999854
No 156
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.99 E-value=4.9e-10 Score=97.08 Aligned_cols=96 Identities=13% Similarity=0.034 Sum_probs=78.6
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCCCCC---Cceeeehh
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNSIPA---ANAIFMKW 227 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~~p~---~D~i~~~~ 227 (309)
++..+|+|||||+|.+++.+++.+|..+ ++++|. +..++.|+++ ++|+++.+|.++.++. .|+|++..
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~-V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG 92 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKS-AIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAG 92 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEE-EEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcC
Confidence 3557999999999999999999999888 999998 6777776642 5899999999987652 59888765
Q ss_pred hhhcCChhHHHHHHHHHHHhcCCCcEEEEecc
Q 021707 228 VLATWTDDECKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 228 vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
. ..+...++|..+.+.|+|+|++++.-.
T Consensus 93 ~----Gg~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 93 M----GGRLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp E----CHHHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred C----ChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 4 334467899999999999998877533
No 157
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.98 E-value=5.6e-10 Score=100.30 Aligned_cols=94 Identities=14% Similarity=0.119 Sum_probs=74.0
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCCCC-CC---ceeeeh-
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNSIP-AA---NAIFMK- 226 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~~p-~~---D~i~~~- 226 (309)
...+|||+|||+|.++..+++. |+.+ ++++|. +.+++.++++ ++++++.+|+++..+ .. |+|+++
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~-v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~~~f~~~D~IvsnP 200 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAI-VFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNP 200 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCE-EEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGGTTTCCEEEECC
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCE-EEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcccccCCCCEEEEcC
Confidence 4468999999999999999999 9999 999999 7777777642 469999999988643 36 999986
Q ss_pred -----------hhhhcCCh------hHHHHHHHHHH-HhcCCCcEEEE
Q 021707 227 -----------WVLATWTD------DECKLIMENCY-KALLAGGKLIA 256 (309)
Q Consensus 227 -----------~vlh~~~d------~~~~~iL~~~~-~aL~pgG~l~i 256 (309)
.+. +.|. .+-..+++++. +.|+|||++++
T Consensus 201 Pyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~ 247 (284)
T 1nv8_A 201 PYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLM 247 (284)
T ss_dssp CCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEE
T ss_pred CCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEE
Confidence 222 1221 11237899999 99999998886
No 158
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.98 E-value=3.2e-09 Score=92.42 Aligned_cols=108 Identities=13% Similarity=0.130 Sum_probs=80.0
Q ss_pred HHHhhcC--CCCCcceEEEecCCccHHHHHHHHh-cCCCceEEEeec-hhHHhhC----CCCCCceEEeCCCCCC--CC-
Q 021707 150 SVLDSYN--GFKGVKRLVDVGGSAGDCLRMILQK-HHFICEGINFDL-PEVVGEA----PSIPGVTHIGGDMFNS--IP- 218 (309)
Q Consensus 150 ~~~~~~~--~~~~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~~D~-p~~~~~a----~~~~ri~~~~~d~~~~--~p- 218 (309)
.++..++ ..+.+.+|||+|||+|.++..+++. .|+-+ ++++|+ |.+++.+ ++..++..+.+|...+ .+
T Consensus 65 ~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~-V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~ 143 (233)
T 4df3_A 65 ALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGR-IYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRH 143 (233)
T ss_dssp HHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCE-EEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTT
T ss_pred HHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCce-EEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCcccccc
Confidence 3555443 2677899999999999999999987 48888 999998 6666544 4458899999998764 22
Q ss_pred --C-CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccC
Q 021707 219 --A-ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLL 262 (309)
Q Consensus 219 --~-~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~ 262 (309)
. .|+|++... +. ++...+++++++.|||||+++|......
T Consensus 144 ~~~~vDvVf~d~~--~~--~~~~~~l~~~~r~LKpGG~lvI~ik~r~ 186 (233)
T 4df3_A 144 LVEGVDGLYADVA--QP--EQAAIVVRNARFFLRDGGYMLMAIKARS 186 (233)
T ss_dssp TCCCEEEEEECCC--CT--THHHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred ccceEEEEEEecc--CC--hhHHHHHHHHHHhccCCCEEEEEEeccc
Confidence 2 387775322 22 2346889999999999999999754433
No 159
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.97 E-value=4.2e-10 Score=103.99 Aligned_cols=94 Identities=19% Similarity=0.201 Sum_probs=74.4
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCCC-------CCceEEeCCCCCC-CCC--Cceeeehhhh
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPSI-------PGVTHIGGDMFNS-IPA--ANAIFMKWVL 229 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~~-------~ri~~~~~d~~~~-~p~--~D~i~~~~vl 229 (309)
+..+|||||||+|.++..+++. +..+ ++++|.+++++.+++. ++|+++.+|+.+. +|. .|+|++..+.
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~-g~~~-v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKA-GARK-VIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHT-TCSE-EEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred CCCEEEEEeccchHHHHHHHHC-CCCE-EEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 4579999999999999999988 5567 9999997777766542 5699999999875 553 4999986654
Q ss_pred hcC-ChhHHHHHHHHHHHhcCCCcEEE
Q 021707 230 ATW-TDDECKLIMENCYKALLAGGKLI 255 (309)
Q Consensus 230 h~~-~d~~~~~iL~~~~~aL~pgG~l~ 255 (309)
|.+ .......+|+++++.|+|||+++
T Consensus 144 ~~l~~~~~~~~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAPDGLIF 170 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred ccccCchhHHHHHHHHHHhCCCCCEEc
Confidence 433 23344689999999999999986
No 160
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.97 E-value=6e-10 Score=99.34 Aligned_cols=104 Identities=19% Similarity=0.258 Sum_probs=83.7
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHh-cCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCCCCC
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQK-HHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNSIPA 219 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~~p~ 219 (309)
..++..++ .....+|||+|||+|.++..+++. .|..+ ++++|. +.+++.++++ ++++++.+|+.+.++.
T Consensus 102 ~~i~~~~~-~~~~~~VLDiG~G~G~~~~~la~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 179 (277)
T 1o54_A 102 SFIAMMLD-VKEGDRIIDTGVGSGAMCAVLARAVGSSGK-VFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDE 179 (277)
T ss_dssp HHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHTTTTCE-EEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSC
T ss_pred HHHHHHhC-CCCCCEEEEECCcCCHHHHHHHHHhCCCcE-EEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccC
Confidence 34566665 667789999999999999999999 68888 999998 7777766542 5799999999876554
Q ss_pred --CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecccc
Q 021707 220 --ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 220 --~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
.|+|++ +.++. .++|+++++.|+|||++++.++..
T Consensus 180 ~~~D~V~~-----~~~~~--~~~l~~~~~~L~pgG~l~~~~~~~ 216 (277)
T 1o54_A 180 KDVDALFL-----DVPDP--WNYIDKCWEALKGGGRFATVCPTT 216 (277)
T ss_dssp CSEEEEEE-----CCSCG--GGTHHHHHHHEEEEEEEEEEESSH
T ss_pred CccCEEEE-----CCcCH--HHHHHHHHHHcCCCCEEEEEeCCH
Confidence 499987 33444 478999999999999999987543
No 161
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.97 E-value=3.4e-10 Score=102.89 Aligned_cols=97 Identities=20% Similarity=0.192 Sum_probs=77.1
Q ss_pred ceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC------CCCceEEeCCCCCC---CC-C-Cceeeehhhh
Q 021707 162 KRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS------IPGVTHIGGDMFNS---IP-A-ANAIFMKWVL 229 (309)
Q Consensus 162 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~------~~ri~~~~~d~~~~---~p-~-~D~i~~~~vl 229 (309)
.+|||||||+|.++..+++++|+.+ ++++|+ +.+++.+++ .+|++++.+|..+. .+ + .|+|++....
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~-v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSR-NTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCE-EEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcE-EEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 4999999999999999999999998 999999 778887764 26899999998653 33 3 4999986444
Q ss_pred hcCChhH--HHHHHHHHHHhcCCCcEEEEecc
Q 021707 230 ATWTDDE--CKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 230 h~~~d~~--~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
+...... ..+++++++++|+|||.+++.-.
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 4322221 25899999999999999988764
No 162
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.96 E-value=6.9e-10 Score=100.20 Aligned_cols=99 Identities=18% Similarity=0.234 Sum_probs=72.9
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC-----------CCCceEEeCCCCCCCC---C-Cce
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS-----------IPGVTHIGGDMFNSIP---A-ANA 222 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~-----------~~ri~~~~~d~~~~~p---~-~D~ 222 (309)
+++.+|||||||+|..+.++++..|..+ ++++|+ +.+++.+++ .+|++++.+|.++..+ + .|+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~-V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVES-ITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCE-EEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccE
Confidence 3567999999999999999999877778 999998 777776643 3589999999987532 2 499
Q ss_pred eeehhhhhcCChhHH--HHHHHHHHHhcCCCcEEEEec
Q 021707 223 IFMKWVLATWTDDEC--KLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 223 i~~~~vlh~~~d~~~--~~iL~~~~~aL~pgG~l~i~e 258 (309)
|++....+.-+.... .+++++++++|+|||.+++.-
T Consensus 161 Ii~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 998544332222221 679999999999999998864
No 163
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.96 E-value=1.9e-10 Score=95.27 Aligned_cols=109 Identities=7% Similarity=0.047 Sum_probs=78.9
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCC---C
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNS---I 217 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~---~ 217 (309)
..+++.+.......+|||+|||+|.++..+++. +..+ ++++|. +.+++.++++ ++++++.+|+.+. .
T Consensus 20 ~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 97 (177)
T 2esr_A 20 GAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSR-GMSA-AVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCL 97 (177)
T ss_dssp HHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHT-TCCE-EEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHB
T ss_pred HHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHc-CCCE-EEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhh
Confidence 344444432345679999999999999999987 5567 999999 6777776542 4799999998763 2
Q ss_pred CC-CceeeehhhhhcCChhHHHHHHHHHH--HhcCCCcEEEEeccccC
Q 021707 218 PA-ANAIFMKWVLATWTDDECKLIMENCY--KALLAGGKLIACEPVLL 262 (309)
Q Consensus 218 p~-~D~i~~~~vlh~~~d~~~~~iL~~~~--~aL~pgG~l~i~e~~~~ 262 (309)
+. .|+|++...+|. ....++++.+. +.|+|||.+++......
T Consensus 98 ~~~fD~i~~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 98 TGRFDLVFLDPPYAK---ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp CSCEEEEEECCSSHH---HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred cCCCCEEEECCCCCc---chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 23 499998765542 23346666666 89999999988765443
No 164
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.96 E-value=7e-10 Score=101.07 Aligned_cols=102 Identities=17% Similarity=0.260 Sum_probs=81.9
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcC-CCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCCCC-
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHH-FICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNSIP- 218 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~~p- 218 (309)
...+++.++ .....+|||||||+|.++..+++..+ +.+ ++++|+ +.+++.++++ ++++++.+|+.+..+
T Consensus 64 ~~~l~~~l~-~~~~~~VLDiGcG~G~~~~~la~~~~~~~~-v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~ 141 (317)
T 1dl5_A 64 MALFMEWVG-LDKGMRVLEIGGGTGYNAAVMSRVVGEKGL-VVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPE 141 (317)
T ss_dssp HHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTCE-EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG
T ss_pred HHHHHHhcC-CCCcCEEEEecCCchHHHHHHHHhcCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcccc
Confidence 344566664 66678999999999999999999988 478 999998 6777766542 569999999977533
Q ss_pred -C-CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecc
Q 021707 219 -A-ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 219 -~-~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
. .|+|++..++|+++ +++++.|+|||++++...
T Consensus 142 ~~~fD~Iv~~~~~~~~~--------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 142 FSPYDVIFVTVGVDEVP--------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp GCCEEEEEECSBBSCCC--------HHHHHHEEEEEEEEEEBC
T ss_pred CCCeEEEEEcCCHHHHH--------HHHHHhcCCCcEEEEEEC
Confidence 2 49999999999887 457889999999999853
No 165
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.96 E-value=2.6e-10 Score=98.62 Aligned_cols=86 Identities=10% Similarity=0.061 Sum_probs=70.7
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC-CCCceEEeCCCCCC--CC-C--Cceeeehhhhhc
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS-IPGVTHIGGDMFNS--IP-A--ANAIFMKWVLAT 231 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~-~~ri~~~~~d~~~~--~p-~--~D~i~~~~vlh~ 231 (309)
....+|||||||+|.++..+++. ..+ ++++|. +.+++.+++ .++++++.+|+.+. ++ . .|+|+++
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~----- 118 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ--AAR-WAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR----- 118 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG--SSE-EEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE-----
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCE-EEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC-----
Confidence 35679999999999999999988 557 999999 778887765 47899999999764 33 3 3999987
Q ss_pred CChhHHHHHHHHHHHhcCCCcEEE
Q 021707 232 WTDDECKLIMENCYKALLAGGKLI 255 (309)
Q Consensus 232 ~~d~~~~~iL~~~~~aL~pgG~l~ 255 (309)
. +..++|+++++.|+|||+++
T Consensus 119 -~--~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 119 -R--GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp -S--CCSGGGGGHHHHEEEEEEEE
T ss_pred -C--CHHHHHHHHHHHcCCCcEEE
Confidence 1 22478999999999999998
No 166
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.95 E-value=7.9e-10 Score=97.65 Aligned_cols=98 Identities=12% Similarity=0.065 Sum_probs=75.5
Q ss_pred CC-CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCC---CC-C-Ccee
Q 021707 158 FK-GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNS---IP-A-ANAI 223 (309)
Q Consensus 158 ~~-~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~---~p-~-~D~i 223 (309)
.. +..+|||+|||+|.++..++++.+. + ++++|+ +.+++.++++ ++++++.+|+.+. ++ . .|+|
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~-~-v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~I 123 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKA-K-IVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIV 123 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCC-E-EEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEE
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCC-c-EEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEE
Confidence 55 6789999999999999999999776 7 999999 6777776542 5799999999764 22 3 4999
Q ss_pred eehhhhhcC------------------ChhHHHHHHHHHHHhcCCCcEEEEe
Q 021707 224 FMKWVLATW------------------TDDECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 224 ~~~~vlh~~------------------~d~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
+++-..+.. ......++++.+++.|+|||+++++
T Consensus 124 i~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 124 TCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp EECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 986333221 1134568999999999999999995
No 167
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.95 E-value=2e-10 Score=100.81 Aligned_cols=98 Identities=12% Similarity=0.024 Sum_probs=78.3
Q ss_pred CcceEEEecCCccHHHHHHHHhcC-CCceEEEeec-hhHHhhCCC-------CCCceEEeCCCCCC---C-----CC-Cc
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHH-FICEGINFDL-PEVVGEAPS-------IPGVTHIGGDMFNS---I-----PA-AN 221 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~~D~-p~~~~~a~~-------~~ri~~~~~d~~~~---~-----p~-~D 221 (309)
+..+|||||||+|..+..+++..| +.+ ++++|. +.+++.+++ .++|+++.+|..+. . ++ .|
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~-v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQ-VITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCE-EEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 457999999999999999999986 778 999998 566665554 26899999998764 2 23 49
Q ss_pred eeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 222 AIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 222 ~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
+|++... .......|+++++.|+|||.|++.+..+..
T Consensus 139 ~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g 175 (242)
T 3r3h_A 139 FIFIDAD-----KTNYLNYYELALKLVTPKGLIAIDNIFWDG 175 (242)
T ss_dssp EEEEESC-----GGGHHHHHHHHHHHEEEEEEEEEECSSSSS
T ss_pred EEEEcCC-----hHHhHHHHHHHHHhcCCCeEEEEECCccCC
Confidence 9987543 344567899999999999999998877654
No 168
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.94 E-value=2.5e-10 Score=100.67 Aligned_cols=95 Identities=17% Similarity=0.052 Sum_probs=76.6
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCCC-----CC-Cceeee
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNSI-----PA-ANAIFM 225 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~~-----p~-~D~i~~ 225 (309)
....+|||||||+|..+..++..+|+.+ ++++|. +.+++.++++ .+|+++.+|+.+.. .. .|+|++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELE-LVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCE-EEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCE-EEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEE
Confidence 4567999999999999999999999999 999998 6677766542 56999999986532 13 499998
Q ss_pred hhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 226 KWVLATWTDDECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 226 ~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
+.+ .+ ...+++.+++.|+|||++++....
T Consensus 158 ~a~----~~--~~~ll~~~~~~LkpgG~l~~~~g~ 186 (249)
T 3g89_A 158 RAV----AP--LCVLSELLLPFLEVGGAAVAMKGP 186 (249)
T ss_dssp ESS----CC--HHHHHHHHGGGEEEEEEEEEEECS
T ss_pred CCc----CC--HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 654 22 358999999999999999987654
No 169
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.93 E-value=9.9e-10 Score=102.70 Aligned_cols=96 Identities=11% Similarity=0.039 Sum_probs=79.4
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-----CCceEEeCCCCCCC-C-C-Cceeeehhhhh
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-----PGVTHIGGDMFNSI-P-A-ANAIFMKWVLA 230 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-----~ri~~~~~d~~~~~-p-~-~D~i~~~~vlh 230 (309)
...+|||+|||+|.++..+++. +.+ ++++|. +.+++.++++ .+++++.+|+.+.. + . .|+|+++..+|
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~-V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~ 309 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAE-VVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFH 309 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCE-EEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCC
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCE-EEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchh
Confidence 4579999999999999999988 457 999998 6777777653 35899999998863 3 2 49999998888
Q ss_pred c---CChhHHHHHHHHHHHhcCCCcEEEEec
Q 021707 231 T---WTDDECKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 231 ~---~~d~~~~~iL~~~~~aL~pgG~l~i~e 258 (309)
. ...+...++++++++.|+|||+++|+.
T Consensus 310 ~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 310 VGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp TTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 7 345667899999999999999999874
No 170
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.93 E-value=2.5e-10 Score=97.46 Aligned_cols=97 Identities=16% Similarity=0.084 Sum_probs=77.1
Q ss_pred CcceEEEecCCccHHHHHHHHhcC-CCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCCCC---CCceeeehh
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHH-FICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNSIP---AANAIFMKW 227 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~~p---~~D~i~~~~ 227 (309)
+..+|||||||+|..+..+++.+| +.+ ++++|. +.+++.++++ ++++++.+|..+..| ..|+|++..
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 134 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSR-VVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRDIDILFMDC 134 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCE-EEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCSEEEEEEET
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCCCCEEEEcC
Confidence 457999999999999999999988 778 999998 6777776642 579999999865322 268888763
Q ss_pred hhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccC
Q 021707 228 VLATWTDDECKLIMENCYKALLAGGKLIACEPVLL 262 (309)
Q Consensus 228 vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~ 262 (309)
. ..+...+++++++.|+|||.+++.+..+.
T Consensus 135 ~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 164 (210)
T 3c3p_A 135 D-----VFNGADVLERMNRCLAKNALLIAVNALRR 164 (210)
T ss_dssp T-----TSCHHHHHHHHGGGEEEEEEEEEESSSSC
T ss_pred C-----hhhhHHHHHHHHHhcCCCeEEEEECcccc
Confidence 2 23456899999999999999998776654
No 171
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.93 E-value=5.8e-10 Score=104.09 Aligned_cols=101 Identities=15% Similarity=0.124 Sum_probs=78.9
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCCC-------CCceEEeCCCCCC-CCC-Cceeeehhh
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPSI-------PGVTHIGGDMFNS-IPA-ANAIFMKWV 228 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~~-------~ri~~~~~d~~~~-~p~-~D~i~~~~v 228 (309)
..+..+|||||||+|.++..++++. ..+ ++++|.+.+++.+++. ++|+++.+|+.+. .|+ .|+|++..+
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g-~~~-V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~ 138 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAG-ARK-VYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWM 138 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTT-CSE-EEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCC
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcC-CCE-EEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEEcCh
Confidence 4567899999999999999999883 336 9999998776666542 6799999999764 554 499999766
Q ss_pred hhcCCh-hHHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 229 LATWTD-DECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 229 lh~~~d-~~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
.|.... .....+++++++.|+|||.+++.+..
T Consensus 139 ~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~ 171 (376)
T 3r0q_C 139 GYFLLRESMFDSVISARDRWLKPTGVMYPSHAR 171 (376)
T ss_dssp BTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEE
T ss_pred hhcccchHHHHHHHHHHHhhCCCCeEEEEecCe
Confidence 665542 34567999999999999999876543
No 172
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.93 E-value=5.1e-10 Score=93.10 Aligned_cols=101 Identities=7% Similarity=-0.063 Sum_probs=74.9
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCCC------CC-Cce
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNSI------PA-ANA 222 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~~------p~-~D~ 222 (309)
.....+|||+|||+|.++..+++ .+..+ ++++|. +.+++.++++ ++++++.+|+.+.. +. .|+
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~-~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~ 119 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVS-RGMDK-SICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDL 119 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHH-TTCSE-EEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred hcCCCCEEEeCCccCHHHHHHHH-cCCCE-EEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCE
Confidence 34567999999999999999887 45567 999999 7777777642 57999999987632 23 499
Q ss_pred eeehhhhhcCChhHHHHHHHHH--HHhcCCCcEEEEeccccCC
Q 021707 223 IFMKWVLATWTDDECKLIMENC--YKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 223 i~~~~vlh~~~d~~~~~iL~~~--~~aL~pgG~l~i~e~~~~~ 263 (309)
|++...+|..... +.++.+ ++.|+|||.+++.......
T Consensus 120 i~~~~~~~~~~~~---~~~~~l~~~~~L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 120 VLLDPPYAKQEIV---SQLEKMLERQLLTNEAVIVCETDKTVK 159 (187)
T ss_dssp EEECCCGGGCCHH---HHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred EEECCCCCchhHH---HHHHHHHHhcccCCCCEEEEEeCCccc
Confidence 9998775533333 455555 7889999999887554433
No 173
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.93 E-value=6.4e-10 Score=103.65 Aligned_cols=103 Identities=10% Similarity=0.074 Sum_probs=77.7
Q ss_pred HHHHhhcCCCCCcceEEEecCC------ccHHHHHHHHh-cCCCceEEEeec-hhHHhhCCCCCCceEEeCCCCCC-CC-
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGS------AGDCLRMILQK-HHFICEGINFDL-PEVVGEAPSIPGVTHIGGDMFNS-IP- 218 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G------~G~~~~~l~~~-~p~~~~~~~~D~-p~~~~~a~~~~ri~~~~~d~~~~-~p- 218 (309)
+.+++.+. .+..+||||||| +|..+..++++ +|+.+ ++++|+ +.+. ...++|+++.+|+.+. ++
T Consensus 207 e~lL~~l~--~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~-V~GVDiSp~m~---~~~~rI~fv~GDa~dlpf~~ 280 (419)
T 3sso_A 207 DRHFRDYR--NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQ-IYGLDIMDKSH---VDELRIRTIQGDQNDAEFLD 280 (419)
T ss_dssp HHHHGGGT--TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCE-EEEEESSCCGG---GCBTTEEEEECCTTCHHHHH
T ss_pred HHHHHhhc--CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCE-EEEEECCHHHh---hcCCCcEEEEecccccchhh
Confidence 34444442 345799999999 66777777765 59999 999999 4442 2457999999999774 33
Q ss_pred ------C-CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 219 ------A-ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 219 ------~-~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
+ .|+|++. ..|++. +..+.|+++++.|||||++++.|..
T Consensus 281 ~l~~~d~sFDlVisd-gsH~~~--d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 281 RIARRYGPFDIVIDD-GSHINA--HVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp HHHHHHCCEEEEEEC-SCCCHH--HHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred hhhcccCCccEEEEC-Ccccch--hHHHHHHHHHHhcCCCeEEEEEecc
Confidence 3 4999875 456654 3468999999999999999999877
No 174
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.93 E-value=9.3e-10 Score=97.34 Aligned_cols=94 Identities=17% Similarity=0.188 Sum_probs=76.5
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-CCceEEeCCCCCC-CCC--CceeeehhhhhcCC
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-PGVTHIGGDMFNS-IPA--ANAIFMKWVLATWT 233 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-~ri~~~~~d~~~~-~p~--~D~i~~~~vlh~~~ 233 (309)
....+|||||||+|.++..+++.+|+.+ ++++|. +.+++.+++. .+++++.+|+.+. ++. .|+|++..+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~---- 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEIT-TFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP---- 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSE-EEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC----
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh----
Confidence 3467999999999999999999988888 999998 6777777653 7899999998653 333 4999986552
Q ss_pred hhHHHHHHHHHHHhcCCCcEEEEeccccC
Q 021707 234 DDECKLIMENCYKALLAGGKLIACEPVLL 262 (309)
Q Consensus 234 d~~~~~iL~~~~~aL~pgG~l~i~e~~~~ 262 (309)
..+++++++|+|||++++..+..+
T Consensus 159 -----~~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 159 -----CKAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp -----CCHHHHHHHEEEEEEEEEEEECTT
T ss_pred -----hhHHHHHHhcCCCcEEEEEEcCHH
Confidence 358999999999999999876543
No 175
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.92 E-value=6.4e-10 Score=96.93 Aligned_cols=99 Identities=17% Similarity=0.127 Sum_probs=78.1
Q ss_pred CCcceEEEecCCccHHHHHHHHhcC-CCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCCC------------
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHH-FICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNSI------------ 217 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~~------------ 217 (309)
.+..+|||||||+|..+..+++.+| ..+ ++++|. +.+++.++++ ++++++.+|..+..
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 137 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGK-ILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSW 137 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCE-EEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccc
Confidence 3467999999999999999999988 677 999998 6777666542 46999999976521
Q ss_pred ------C-C-CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 218 ------P-A-ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 218 ------p-~-~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
+ . .|+|++... .....++++++++.|+|||++++.+..++.
T Consensus 138 ~~~f~~~~~~fD~I~~~~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g 186 (239)
T 2hnk_A 138 ASDFAFGPSSIDLFFLDAD-----KENYPNYYPLILKLLKPGGLLIADNVLWDG 186 (239)
T ss_dssp GTTTCCSTTCEEEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECSSGGG
T ss_pred cccccCCCCCcCEEEEeCC-----HHHHHHHHHHHHHHcCCCeEEEEEccccCC
Confidence 1 3 499987643 344568899999999999999998866553
No 176
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.92 E-value=1.9e-09 Score=91.03 Aligned_cols=103 Identities=20% Similarity=0.284 Sum_probs=74.8
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCCCCCceEEeCCCCCCC------------
Q 021707 150 SVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPSIPGVTHIGGDMFNSI------------ 217 (309)
Q Consensus 150 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~~~ri~~~~~d~~~~~------------ 217 (309)
.+.+.+..+.+..+|||+|||+|.++..++++ ..+ ++++|+.++ ...++++++.+|+.+..
T Consensus 15 ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~--~~~-V~gvD~~~~----~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 87 (191)
T 3dou_A 15 FLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL--ARK-IISIDLQEM----EEIAGVRFIRCDIFKETIFDDIDRALREE 87 (191)
T ss_dssp HHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT--CSE-EEEEESSCC----CCCTTCEEEECCTTSSSHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc--CCc-EEEEecccc----ccCCCeEEEEccccCHHHHHHHHHHhhcc
Confidence 45555543456789999999999999999988 667 999999543 23478999999998742
Q ss_pred --CCCceeeehhhhh---------cCChhHHHHHHHHHHHhcCCCcEEEEecc
Q 021707 218 --PAANAIFMKWVLA---------TWTDDECKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 218 --p~~D~i~~~~vlh---------~~~d~~~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
...|+|++..... ...-..+..+|+.+.+.|+|||++++.-.
T Consensus 88 ~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 88 GIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp TCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 2359998743211 01112346789999999999999987654
No 177
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.92 E-value=1.5e-09 Score=91.14 Aligned_cols=105 Identities=19% Similarity=0.280 Sum_probs=76.2
Q ss_pred HHhhcCCCCCcceEEEecCCccHHHHHHHHhcCC---------CceEEEeechhHHhhCCCCCCceEE-eCCCCCC----
Q 021707 151 VLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHF---------ICEGINFDLPEVVGEAPSIPGVTHI-GGDMFNS---- 216 (309)
Q Consensus 151 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~---------~~~~~~~D~p~~~~~a~~~~ri~~~-~~d~~~~---- 216 (309)
+.+.+..+....+|||||||+|.++..++++++. .+ ++++|+.++ ...++++++ .+|+.+.
T Consensus 13 l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~-v~~vD~s~~----~~~~~~~~~~~~d~~~~~~~~ 87 (196)
T 2nyu_A 13 VNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGF-VLGVDLLHI----FPLEGATFLCPADVTDPRTSQ 87 (196)
T ss_dssp HHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCE-EEEECSSCC----CCCTTCEEECSCCTTSHHHHH
T ss_pred HHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCce-EEEEechhc----ccCCCCeEEEeccCCCHHHHH
Confidence 3334432455689999999999999999999875 77 999999653 123679999 9998753
Q ss_pred -----CCC--Cceeeehhhhhc----CChhH-----HHHHHHHHHHhcCCCcEEEEeccc
Q 021707 217 -----IPA--ANAIFMKWVLAT----WTDDE-----CKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 217 -----~p~--~D~i~~~~vlh~----~~d~~-----~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
.+. .|+|++...+|. ..+.. ..++|+++++.|+|||++++....
T Consensus 88 ~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 88 RILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 222 499998554432 12221 248899999999999999987653
No 178
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.92 E-value=4.1e-10 Score=102.13 Aligned_cols=100 Identities=17% Similarity=0.204 Sum_probs=74.9
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC----------CCCceEEeCCCCCCC---C-C-Cce
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS----------IPGVTHIGGDMFNSI---P-A-ANA 222 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~----------~~ri~~~~~d~~~~~---p-~-~D~ 222 (309)
.+..+|||||||+|.++..+++..|..+ ++++|+ +.+++.+++ .+|++++.+|..+.. + + .|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~-v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEH-CDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCE-EEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 4567999999999999999998877788 999999 667766543 268999999987531 2 3 499
Q ss_pred eeehhhhhcCChhHH--HHHHHHHHHhcCCCcEEEEecc
Q 021707 223 IFMKWVLATWTDDEC--KLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 223 i~~~~vlh~~~d~~~--~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
|++....+.++.... .+++++++++|+|||++++...
T Consensus 173 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 173 VIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp EEEECC---------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 999766665554322 5899999999999999998743
No 179
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.91 E-value=8.7e-10 Score=95.37 Aligned_cols=96 Identities=16% Similarity=0.136 Sum_probs=76.2
Q ss_pred cceEEEecCCccHHHHHHHHhcC-CCceEEEeec-hhHHhhCCC-------C-CCceEEeCCCCCC---C-CC-Cceeee
Q 021707 161 VKRLVDVGGSAGDCLRMILQKHH-FICEGINFDL-PEVVGEAPS-------I-PGVTHIGGDMFNS---I-PA-ANAIFM 225 (309)
Q Consensus 161 ~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~~D~-p~~~~~a~~-------~-~ri~~~~~d~~~~---~-p~-~D~i~~ 225 (309)
..+|||||||+|..+..+++.+| +.+ ++++|. +.+++.+++ . ++|+++.+|..+. + ++ .|+|++
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTT-LTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSE-EEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 34999999999999999999885 778 999998 667776654 2 4899999998653 3 23 499987
Q ss_pred hhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccC
Q 021707 226 KWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLL 262 (309)
Q Consensus 226 ~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~ 262 (309)
... .....+.++++.+.|+|||.+++.+..+.
T Consensus 136 d~~-----~~~~~~~l~~~~~~LkpGG~lv~dn~~~~ 167 (221)
T 3dr5_A 136 QVS-----PMDLKALVDAAWPLLRRGGALVLADALLD 167 (221)
T ss_dssp CCC-----TTTHHHHHHHHHHHEEEEEEEEETTTTGG
T ss_pred cCc-----HHHHHHHHHHHHHHcCCCcEEEEeCCCCC
Confidence 542 23446789999999999999999887764
No 180
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.90 E-value=7.3e-10 Score=97.43 Aligned_cols=99 Identities=12% Similarity=0.038 Sum_probs=78.1
Q ss_pred CCcceEEEecCCccHHHHHHHHhcC-CCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCC---C------CC-
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHH-FICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNS---I------PA- 219 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~---~------p~- 219 (309)
.+..+|||||||+|..+..+++..| +.+ ++++|. +.+++.++++ ++|+++.+|..+. . +.
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~-v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGK-ILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS 156 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCE-EEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence 3457999999999999999999988 778 999998 6677766542 5899999998653 2 23
Q ss_pred CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 220 ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 220 ~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
.|+|++... ......+++++++.|+|||.|++.+.+++.
T Consensus 157 fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g 195 (247)
T 1sui_A 157 YDFIFVDAD-----KDNYLNYHKRLIDLVKVGGVIGYDNTLWNG 195 (247)
T ss_dssp BSEEEECSC-----STTHHHHHHHHHHHBCTTCCEEEECTTGGG
T ss_pred EEEEEEcCc-----hHHHHHHHHHHHHhCCCCeEEEEecCCcCC
Confidence 499987532 234578999999999999999887766543
No 181
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.90 E-value=7.4e-09 Score=90.12 Aligned_cols=101 Identities=19% Similarity=0.203 Sum_probs=79.4
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCCC-CC-
Q 021707 150 SVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNSI-PA- 219 (309)
Q Consensus 150 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~~-p~- 219 (309)
.++..++ .....+|||+|||+|.++..+++. ..+ ++++|. +.+++.++++ ++++++.+|+.+.. +.
T Consensus 82 ~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~--~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 157 (248)
T 2yvl_A 82 YIALKLN-LNKEKRVLEFGTGSGALLAVLSEV--AGE-VWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEG 157 (248)
T ss_dssp HHHHHTT-CCTTCEEEEECCTTSHHHHHHHHH--SSE-EEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTT
T ss_pred HHHHhcC-CCCCCEEEEeCCCccHHHHHHHHh--CCE-EEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCC
Confidence 4555554 666789999999999999999998 667 999998 6677666542 68999999998865 44
Q ss_pred -CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecccc
Q 021707 220 -ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 220 -~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
.|+|++. .++. .++|+++.+.|+|||++++..+..
T Consensus 158 ~~D~v~~~-----~~~~--~~~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 158 IFHAAFVD-----VREP--WHYLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp CBSEEEEC-----SSCG--GGGHHHHHHHBCTTCEEEEEESSH
T ss_pred cccEEEEC-----CcCH--HHHHHHHHHHcCCCCEEEEEeCCH
Confidence 4999872 3333 478999999999999999987643
No 182
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.89 E-value=1.7e-09 Score=93.90 Aligned_cols=95 Identities=15% Similarity=0.018 Sum_probs=78.1
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCCCCC---Cceeeehh
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNSIPA---ANAIFMKW 227 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~~p~---~D~i~~~~ 227 (309)
+++.+|+|||||+|.+++.+++.+|..+ ++++|. |..++.|+++ ++|+++.+|.++..+. .|+|++..
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~-V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaG 98 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDF-AIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICG 98 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEE-EEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeC
Confidence 4568999999999999999999998888 999998 6777777642 6899999999987442 59988765
Q ss_pred hhhcCChhHHHHHHHHHHHhcCCCcEEEEec
Q 021707 228 VLATWTDDECKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 228 vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e 258 (309)
+ ..+...++|.+..+.|+++|++++.-
T Consensus 99 m----Gg~lI~~IL~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 99 M----GGRLIADILNNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp E----CHHHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred C----chHHHHHHHHHHHHHhCcCCEEEEEC
Confidence 5 33556789999999999999887775
No 183
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.89 E-value=4e-10 Score=95.87 Aligned_cols=97 Identities=8% Similarity=-0.010 Sum_probs=73.6
Q ss_pred cceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC--------CCceEEeCCCCCCC-----CC-Cceeee
Q 021707 161 VKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI--------PGVTHIGGDMFNSI-----PA-ANAIFM 225 (309)
Q Consensus 161 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~--------~ri~~~~~d~~~~~-----p~-~D~i~~ 225 (309)
..+|||+|||+|.++..+++... .+ ++++|. +.+++.++++ ++++++.+|+.+.. .. .|+|++
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~-~~-v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQA-KK-VTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTC-SE-EEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCeEEEcCCccCHHHHHHHHccC-CE-EEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 46899999999999999887753 46 999998 6778777642 58999999986532 23 699998
Q ss_pred hhhhhcCChhHHHHHHHHH--HHhcCCCcEEEEeccccC
Q 021707 226 KWVLATWTDDECKLIMENC--YKALLAGGKLIACEPVLL 262 (309)
Q Consensus 226 ~~vlh~~~d~~~~~iL~~~--~~aL~pgG~l~i~e~~~~ 262 (309)
...+| . .+..++++.+ .+.|+|||.+++......
T Consensus 132 ~~~~~-~--~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 132 DPPFH-F--NLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp CCCSS-S--CHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CCCCC-C--ccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 87755 3 3346788888 557999999988765443
No 184
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.89 E-value=5.6e-09 Score=90.91 Aligned_cols=105 Identities=11% Similarity=0.182 Sum_probs=75.4
Q ss_pred HHHHhhcC--CCCCcceEEEecCCccHHHHHHHHhc-CCCceEEEeec-hhH----HhhCCCCCCceEEeCCCCCC----
Q 021707 149 TSVLDSYN--GFKGVKRLVDVGGSAGDCLRMILQKH-HFICEGINFDL-PEV----VGEAPSIPGVTHIGGDMFNS---- 216 (309)
Q Consensus 149 ~~~~~~~~--~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~~D~-p~~----~~~a~~~~ri~~~~~d~~~~---- 216 (309)
..++..++ .+..+.+|||+|||+|.++..+++.. |+.+ ++++|. +.+ ++.+++..+++++.+|..++
T Consensus 63 ~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~-V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~ 141 (232)
T 3id6_C 63 GAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGK-AYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYK 141 (232)
T ss_dssp HHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSE-EEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTT
T ss_pred HHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCE-EEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhh
Confidence 34555543 25667899999999999999999874 5777 999998 544 34444557899999998764
Q ss_pred -CCC-CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEec
Q 021707 217 -IPA-ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 217 -~p~-~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e 258 (309)
.++ .|+|++.... ++ +...+++++++.|+|||++++.-
T Consensus 142 ~~~~~~D~I~~d~a~---~~-~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 142 SVVENVDVLYVDIAQ---PD-QTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp TTCCCEEEEEECCCC---TT-HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccceEEEEecCCC---hh-HHHHHHHHHHHhCCCCeEEEEEE
Confidence 122 4999876432 33 32334556677999999999873
No 185
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.88 E-value=1.3e-09 Score=99.76 Aligned_cols=94 Identities=17% Similarity=0.261 Sum_probs=73.1
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCCC-------CCceEEeCCCCCC-CC-C-Cceeeehhhh
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPSI-------PGVTHIGGDMFNS-IP-A-ANAIFMKWVL 229 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~~-------~ri~~~~~d~~~~-~p-~-~D~i~~~~vl 229 (309)
+..+|||||||+|.++..+++. +..+ ++++|.+.+++.+++. ++|+++.+|+.+. .| + .|+|++..+.
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~-g~~~-v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKH-GAKH-VIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMG 115 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-CCSE-EEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCB
T ss_pred CCCEEEEecCccHHHHHHHHHC-CCCE-EEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCch
Confidence 4579999999999999998886 4457 9999997677766542 6799999999875 55 3 4999987554
Q ss_pred hcCC-hhHHHHHHHHHHHhcCCCcEEE
Q 021707 230 ATWT-DDECKLIMENCYKALLAGGKLI 255 (309)
Q Consensus 230 h~~~-d~~~~~iL~~~~~aL~pgG~l~ 255 (309)
+.+. +.....+|+++++.|+|||+++
T Consensus 116 ~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 116 YFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp TTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 4432 2334589999999999999987
No 186
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.88 E-value=7.1e-10 Score=95.64 Aligned_cols=98 Identities=11% Similarity=0.123 Sum_probs=77.7
Q ss_pred CCcceEEEecCCccHHHHHHHHhcC-CCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCC---C------CCC
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHH-FICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNS---I------PAA 220 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~---~------p~~ 220 (309)
.+..+|||||||+|..+..+++.+| +.+ ++++|. +.+++.++++ ++++++.+|+.+. + ...
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGR-VVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCE-EEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 3567999999999999999999987 677 999998 6677666542 6899999998653 2 224
Q ss_pred ceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccC
Q 021707 221 NAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLL 262 (309)
Q Consensus 221 D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~ 262 (309)
|+|++.. +......+++++.+.|+|||.+++.+..+.
T Consensus 147 D~v~~d~-----~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 183 (229)
T 2avd_A 147 DVAVVDA-----DKENCSAYYERCLQLLRPGGILAVLRVLWR 183 (229)
T ss_dssp EEEEECS-----CSTTHHHHHHHHHHHEEEEEEEEEECCSGG
T ss_pred cEEEECC-----CHHHHHHHHHHHHHHcCCCeEEEEECCCcC
Confidence 9998843 234456899999999999999999887654
No 187
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.88 E-value=1e-09 Score=98.10 Aligned_cols=95 Identities=15% Similarity=0.015 Sum_probs=76.8
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCCCCC--Cceeeehhh
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNSIPA--ANAIFMKWV 228 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~~p~--~D~i~~~~v 228 (309)
..+.+|||+|||+|.++..+++..+. + ++++|. |.+++.++++ ++++++.+|+++..+. .|+|++...
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~-~-V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p 201 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKA-K-VIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCC-E-EEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCC-E-EEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCc
Confidence 34679999999999999999999877 7 999998 6777776542 4699999999886443 499988532
Q ss_pred hhcCChhHHHHHHHHHHHhcCCCcEEEEecccc
Q 021707 229 LATWTDDECKLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 229 lh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
....++++++.+.|+|||++++.+...
T Consensus 202 ------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 202 ------VRTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp ------SSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ------hhHHHHHHHHHHHCCCCeEEEEEEeec
Confidence 122578999999999999999988764
No 188
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.88 E-value=3.9e-09 Score=97.49 Aligned_cols=110 Identities=12% Similarity=-0.005 Sum_probs=84.0
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhc-CCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCC-CC
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKH-HFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNS-IP 218 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~-~p 218 (309)
+..++.... |....+|||+|||+|.++++++... |+.+ ++++|. +.+++.++++ ++++++.+|+.+. .+
T Consensus 192 a~~l~~~~~-~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~-v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~ 269 (354)
T 3tma_A 192 AQALLRLAD-ARPGMRVLDPFTGSGTIALEAASTLGPTSP-VYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRF 269 (354)
T ss_dssp HHHHHHHTT-CCTTCCEEESSCTTSHHHHHHHHHHCTTSC-EEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGT
T ss_pred HHHHHHHhC-CCCCCEEEeCCCCcCHHHHHHHHhhCCCce-EEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccc
Confidence 344555554 7778899999999999999999998 8899 999998 7788777653 4899999999874 22
Q ss_pred -C-CceeeehhhhhcCC--hh----HHHHHHHHHHHhcCCCcEEEEecc
Q 021707 219 -A-ANAIFMKWVLATWT--DD----ECKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 219 -~-~D~i~~~~vlh~~~--d~----~~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
. .|+|+++-..+... .. ...++++++++.|+|||++++...
T Consensus 270 ~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 270 FPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp CCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred cCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 2 49999854433211 11 236899999999999999999744
No 189
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.87 E-value=2.8e-09 Score=93.32 Aligned_cols=95 Identities=15% Similarity=0.116 Sum_probs=78.4
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCCCCC---Cceeeehh
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNSIPA---ANAIFMKW 227 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~~p~---~D~i~~~~ 227 (309)
++..+|+|||||+|.+++.+++.+|..+ ++++|. |..++.|+++ ++|+++.+|.++..+. +|+|++..
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~-V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviag 98 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASF-AIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAG 98 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEE-EEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeC
Confidence 4567999999999999999999998888 999998 6777777652 6799999999987442 59988755
Q ss_pred hhhcCChhHHHHHHHHHHHhcCCCcEEEEec
Q 021707 228 VLATWTDDECKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 228 vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e 258 (309)
+ ..+-..++|.+..+.|++++++++.-
T Consensus 99 m----Gg~lI~~IL~~~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 99 M----GGTLIRTILEEGAAKLAGVTKLILQP 125 (244)
T ss_dssp E----CHHHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred C----chHHHHHHHHHHHHHhCCCCEEEEEc
Confidence 4 34556789999999999999888874
No 190
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.87 E-value=1.6e-09 Score=93.64 Aligned_cols=100 Identities=20% Similarity=0.204 Sum_probs=77.9
Q ss_pred HHHhhcC-CCCCcceEEEecCCccHHHHHHHHhcC------CCceEEEeec-hhHHhhCCC-----------CCCceEEe
Q 021707 150 SVLDSYN-GFKGVKRLVDVGGSAGDCLRMILQKHH------FICEGINFDL-PEVVGEAPS-----------IPGVTHIG 210 (309)
Q Consensus 150 ~~~~~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p------~~~~~~~~D~-p~~~~~a~~-----------~~ri~~~~ 210 (309)
.+++.+. ......+|||||||+|.++..+++..+ ..+ ++++|. +.+++.+++ .++++++.
T Consensus 73 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 151 (227)
T 1r18_A 73 FALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTR-IVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE 151 (227)
T ss_dssp HHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCE-EEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCE-EEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEE
Confidence 3444442 144567999999999999999998765 357 999998 677776654 25899999
Q ss_pred CCCCCCCCC---CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEec
Q 021707 211 GDMFNSIPA---ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 211 ~d~~~~~p~---~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e 258 (309)
+|..+.++. .|+|++...+|+++ +++.+.|+|||++++.-
T Consensus 152 ~d~~~~~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 152 GDGRKGYPPNAPYNAIHVGAAAPDTP--------TELINQLASGGRLIVPV 194 (227)
T ss_dssp SCGGGCCGGGCSEEEEEECSCBSSCC--------HHHHHTEEEEEEEEEEE
T ss_pred CCcccCCCcCCCccEEEECCchHHHH--------HHHHHHhcCCCEEEEEE
Confidence 999876553 49999999988765 56888999999998873
No 191
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.87 E-value=6.2e-09 Score=92.53 Aligned_cols=98 Identities=11% Similarity=0.012 Sum_probs=72.1
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCCC--C------CceEE--eCCCCCCCCC-Cceeeeh
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPSI--P------GVTHI--GGDMFNSIPA-ANAIFMK 226 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~~--~------ri~~~--~~d~~~~~p~-~D~i~~~ 226 (309)
+....+|||||||+|.++..+++. .+ ++++|+..++..+++. . +++++ .+|+.+..+. .|+|++.
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~---~~-V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~V~sd 147 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR---PH-VMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLPVERTDVIMCD 147 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS---TT-EEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEEC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc---Cc-EEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCCCCCCcEEEEe
Confidence 456789999999999999999887 56 9999996664433322 2 68999 8999764333 5999987
Q ss_pred hhhhcCChh----H-HHHHHHHHHHhcCCCc--EEEEeccc
Q 021707 227 WVLATWTDD----E-CKLIMENCYKALLAGG--KLIACEPV 260 (309)
Q Consensus 227 ~vlh~~~d~----~-~~~iL~~~~~aL~pgG--~l~i~e~~ 260 (309)
.. +..+.. . ..++|+.+++.|+||| .+++..+.
T Consensus 148 ~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 148 VG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred Cc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 66 433221 1 2348999999999999 88885544
No 192
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.87 E-value=2.9e-09 Score=94.67 Aligned_cols=104 Identities=13% Similarity=0.204 Sum_probs=81.2
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHh-cCCCceEEEeec-hhHHhhCCC---------CCCceEEeCCCCCC-
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQK-HHFICEGINFDL-PEVVGEAPS---------IPGVTHIGGDMFNS- 216 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~~D~-p~~~~~a~~---------~~ri~~~~~d~~~~- 216 (309)
..++..++ .....+|||+|||+|.++..+++. .|..+ ++++|. +.+++.+++ .++++++.+|+.+.
T Consensus 89 ~~i~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~ 166 (280)
T 1i9g_A 89 AQIVHEGD-IFPGARVLEAGAGSGALTLSLLRAVGPAGQ-VISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE 166 (280)
T ss_dssp HHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSE-EEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC
T ss_pred HHHHHHcC-CCCCCEEEEEcccccHHHHHHHHHhCCCCE-EEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC
Confidence 34566665 667789999999999999999996 57888 999998 667666543 25899999999765
Q ss_pred CCC--CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecccc
Q 021707 217 IPA--ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 217 ~p~--~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
++. .|+|++ +.++. .++|++++++|+|||++++..+..
T Consensus 167 ~~~~~~D~v~~-----~~~~~--~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 167 LPDGSVDRAVL-----DMLAP--WEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp CCTTCEEEEEE-----ESSCG--GGGHHHHHHHEEEEEEEEEEESSH
T ss_pred CCCCceeEEEE-----CCcCH--HHHHHHHHHhCCCCCEEEEEeCCH
Confidence 433 499988 23333 278999999999999999987643
No 193
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.87 E-value=5.8e-10 Score=91.32 Aligned_cols=95 Identities=16% Similarity=0.070 Sum_probs=71.7
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC----C-CceEEeCCCCCCCC-------CCceeeeh
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI----P-GVTHIGGDMFNSIP-------AANAIFMK 226 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~----~-ri~~~~~d~~~~~p-------~~D~i~~~ 226 (309)
...+|||+|||+|.++..+++..+. ++++|. +.+++.++++ . +++++.+|+.+..+ ..|+|++.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE---AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE---EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe---EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 4579999999999999999998654 899998 7777777653 2 89999999876322 25999998
Q ss_pred hhhhcCChhHHHHHHHHHH--HhcCCCcEEEEecccc
Q 021707 227 WVLATWTDDECKLIMENCY--KALLAGGKLIACEPVL 261 (309)
Q Consensus 227 ~vlh~~~d~~~~~iL~~~~--~aL~pgG~l~i~e~~~ 261 (309)
..+| -..+ ++++.+. +.|+|||.+++.....
T Consensus 118 ~~~~-~~~~---~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 118 PPYA-MDLA---ALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CCTT-SCTT---HHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred CCCc-hhHH---HHHHHHHhhcccCCCcEEEEEeCCc
Confidence 7776 2222 3445554 9999999988865543
No 194
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.86 E-value=5.4e-09 Score=93.46 Aligned_cols=98 Identities=8% Similarity=-0.051 Sum_probs=71.6
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCCC--C------CceEE--eCCCCCCCCC-Cceeeeh
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPSI--P------GVTHI--GGDMFNSIPA-ANAIFMK 226 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~~--~------ri~~~--~~d~~~~~p~-~D~i~~~ 226 (309)
+....+|||||||+|.++..++++ .+ ++++|+..++..+++. . +++++ .+|+.+..+. .|+|++.
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~---~~-V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~Vvsd 155 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ---PN-VREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKMEPFQADTVLCD 155 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS---TT-EEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCCCCCCSEEEEC
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc---CC-EEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCCCCCcCEEEEC
Confidence 456789999999999999999987 46 9999996664444322 2 78999 8998763333 5999987
Q ss_pred hhhhcCCh----hH-HHHHHHHHHHhcCCCc--EEEEeccc
Q 021707 227 WVLATWTD----DE-CKLIMENCYKALLAGG--KLIACEPV 260 (309)
Q Consensus 227 ~vlh~~~d----~~-~~~iL~~~~~aL~pgG--~l~i~e~~ 260 (309)
.. +..+. .. ..++|+.+++.|+||| .+++..+.
T Consensus 156 ~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 156 IG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 66 43322 11 2358999999999999 88885443
No 195
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.85 E-value=8.9e-10 Score=97.25 Aligned_cols=96 Identities=14% Similarity=0.179 Sum_probs=75.5
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-----CCceEEeCCCCCCCCC--Cceeeehhhhh
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-----PGVTHIGGDMFNSIPA--ANAIFMKWVLA 230 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-----~ri~~~~~d~~~~~p~--~D~i~~~~vlh 230 (309)
.+..+|||+|||+|.++..+++..+ + ++++|. |.+++.++++ -.+++..+|+.+.++. .|+|+++...|
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~--~-v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~Vv~n~~~~ 195 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG--K-ALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVANLYAE 195 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--E-EEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEECCHH
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC--e-EEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCEEEECCcHH
Confidence 3567999999999999999998766 7 999998 6677666542 1289999998765433 49999865443
Q ss_pred cCChhHHHHHHHHHHHhcCCCcEEEEeccccC
Q 021707 231 TWTDDECKLIMENCYKALLAGGKLIACEPVLL 262 (309)
Q Consensus 231 ~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~ 262 (309)
....+++++++.|+|||++++.+....
T Consensus 196 -----~~~~~l~~~~~~LkpgG~lils~~~~~ 222 (254)
T 2nxc_A 196 -----LHAALAPRYREALVPGGRALLTGILKD 222 (254)
T ss_dssp -----HHHHHHHHHHHHEEEEEEEEEEEEEGG
T ss_pred -----HHHHHHHHHHHHcCCCCEEEEEeeccC
Confidence 346899999999999999999876544
No 196
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.84 E-value=4.4e-09 Score=90.56 Aligned_cols=93 Identities=20% Similarity=0.160 Sum_probs=74.8
Q ss_pred CCCcceEEEecCCccHHHHHHHHhc-----CCCceEEEeec-hhHHhhCCC-----------CCCceEEeCCCCCCC---
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKH-----HFICEGINFDL-PEVVGEAPS-----------IPGVTHIGGDMFNSI--- 217 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~-----p~~~~~~~~D~-p~~~~~a~~-----------~~ri~~~~~d~~~~~--- 217 (309)
.....+|||||||+|.++..+++.. |+.+ ++++|. +.+++.+++ .++++++.+|..+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSY-VIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCE-EEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCE-EEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 4456799999999999999999986 5678 999998 667766654 258999999997754
Q ss_pred -CC---CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecc
Q 021707 218 -PA---ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 218 -p~---~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
+. .|+|++...+|++ ++++++.|+|||++++.-.
T Consensus 157 ~~~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 157 KKELGLFDAIHVGASASEL--------PEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHHHCCEEEEEECSBBSSC--------CHHHHHHEEEEEEEEEEEE
T ss_pred CccCCCcCEEEECCchHHH--------HHHHHHhcCCCcEEEEEEc
Confidence 22 4999999888765 4678899999999998743
No 197
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.83 E-value=1.3e-09 Score=97.83 Aligned_cols=100 Identities=17% Similarity=0.106 Sum_probs=76.8
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC----------CCCceEEeCCCCCC---CCC-Cce
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS----------IPGVTHIGGDMFNS---IPA-ANA 222 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~----------~~ri~~~~~d~~~~---~p~-~D~ 222 (309)
..++.+|||||||+|..+.++++..|..+ ++++|+ +.+++.+++ .+|++++.+|..+. .++ .|+
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~-v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYKSVEN-IDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDV 154 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCE-EEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcCCCCE-EEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceE
Confidence 34567999999999999999998878888 999999 677766543 26899999998653 233 499
Q ss_pred eeehhhhhcCChhHH--HHHHHHHHHhcCCCcEEEEec
Q 021707 223 IFMKWVLATWTDDEC--KLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 223 i~~~~vlh~~~d~~~--~~iL~~~~~aL~pgG~l~i~e 258 (309)
|++....+..+.... .+++++++++|+|||.+++.-
T Consensus 155 Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 155 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 998543332222222 589999999999999998874
No 198
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.83 E-value=1.5e-09 Score=94.67 Aligned_cols=98 Identities=14% Similarity=0.058 Sum_probs=77.5
Q ss_pred CCcceEEEecCCccHHHHHHHHhcC-CCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCC---C------CC-
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHH-FICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNS---I------PA- 219 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~---~------p~- 219 (309)
.+..+|||||||+|..+..+++..| +.+ ++++|. +.+++.++++ ++|+++.+|..+. + +.
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~-v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGK-ITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGS 147 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCE-EEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence 3467999999999999999999988 678 999998 6777766542 5799999998653 2 23
Q ss_pred CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccC
Q 021707 220 ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLL 262 (309)
Q Consensus 220 ~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~ 262 (309)
.|+|++.. +......+++++.+.|+|||.+++.+..+.
T Consensus 148 fD~I~~d~-----~~~~~~~~l~~~~~~L~pGG~lv~d~~~~~ 185 (237)
T 3c3y_A 148 YDFGFVDA-----DKPNYIKYHERLMKLVKVGGIVAYDNTLWG 185 (237)
T ss_dssp EEEEEECS-----CGGGHHHHHHHHHHHEEEEEEEEEECTTGG
T ss_pred cCEEEECC-----chHHHHHHHHHHHHhcCCCeEEEEecCCcC
Confidence 49998753 334567899999999999999988776554
No 199
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.83 E-value=4.9e-09 Score=94.20 Aligned_cols=101 Identities=17% Similarity=0.189 Sum_probs=73.5
Q ss_pred HHHHhhcCCCC-CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhh-CCCCCCceEEe-CCCCC----CCCC-
Q 021707 149 TSVLDSYNGFK-GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGE-APSIPGVTHIG-GDMFN----SIPA- 219 (309)
Q Consensus 149 ~~~~~~~~~~~-~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~-a~~~~ri~~~~-~d~~~----~~p~- 219 (309)
..+++.+. .. ...+|||||||+|.++..+++. +..+ ++++|. +.+++. ++..+|+.... .|+.. .+|.
T Consensus 74 ~~~l~~~~-~~~~g~~vLDiGcGTG~~t~~L~~~-ga~~-V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~ 150 (291)
T 3hp7_A 74 EKALAVFN-LSVEDMITIDIGASTGGFTDVMLQN-GAKL-VYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEG 150 (291)
T ss_dssp HHHHHHTT-CCCTTCEEEEETCTTSHHHHHHHHT-TCSE-EEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTC
T ss_pred HHHHHhcC-CCccccEEEecCCCccHHHHHHHhC-CCCE-EEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCC
Confidence 44566664 43 4569999999999999999887 4456 999999 667766 34446665543 23321 1343
Q ss_pred -CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEe
Q 021707 220 -ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 220 -~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
.|++++..++|++ ..+|+++++.|+|||++++.
T Consensus 151 ~fD~v~~d~sf~sl-----~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 151 LPSFASIDVSFISL-----NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp CCSEEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEE
T ss_pred CCCEEEEEeeHhhH-----HHHHHHHHHHcCcCCEEEEE
Confidence 5999888777754 47899999999999999987
No 200
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.83 E-value=1.9e-10 Score=101.14 Aligned_cols=100 Identities=8% Similarity=-0.016 Sum_probs=69.5
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCC----CCC----C-Cce
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFN----SIP----A-ANA 222 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~----~~p----~-~D~ 222 (309)
...+|||+|||+|.++..+++++|+.+ ++++|. +.+++.++++ ++++++.+|..+ +++ . .|+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWY-FLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCe-EEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 456999999999999999999998888 999998 7787776542 469999999543 444 2 499
Q ss_pred eeehhhhhcCCh-------------hHHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 223 IFMKWVLATWTD-------------DECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 223 i~~~~vlh~~~d-------------~~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
|+++-..|.... +....++++++++|+|||.+.+++.+
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~ 194 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRI 194 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHHHHHH
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHH
Confidence 998855544330 01134677788888888887776544
No 201
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.82 E-value=1.1e-09 Score=95.21 Aligned_cols=97 Identities=16% Similarity=0.151 Sum_probs=77.4
Q ss_pred CcceEEEecCCccHHHHHHHHhcC-CCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCC---C------CCCc
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHH-FICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNS---I------PAAN 221 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~---~------p~~D 221 (309)
+..+|||||||+|..+..+++..| +.+ ++++|. +.+++.++++ ++|+++.+|..+. + ...|
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~-v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQ-IIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCE-EEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 456999999999999999999987 678 999998 6677766542 5799999997542 1 2249
Q ss_pred eeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccC
Q 021707 222 AIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLL 262 (309)
Q Consensus 222 ~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~ 262 (309)
+|++... ..+...+++++.+.|+|||.|++.+..++
T Consensus 151 ~V~~d~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 186 (232)
T 3cbg_A 151 LIFIDAD-----KRNYPRYYEIGLNLLRRGGLMVIDNVLWH 186 (232)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHTEEEEEEEEEECTTGG
T ss_pred EEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEeCCCcC
Confidence 9987543 34557899999999999999999887765
No 202
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.81 E-value=9.6e-09 Score=91.91 Aligned_cols=95 Identities=12% Similarity=0.067 Sum_probs=72.3
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec--hhHHhhCCCC----------------CCceEEeCCCCCC---C
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL--PEVVGEAPSI----------------PGVTHIGGDMFNS---I 217 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~--p~~~~~a~~~----------------~ri~~~~~d~~~~---~ 217 (309)
....+|||||||+|.++..+++.. ..+ ++++|. +.+++.++++ ++++++..|+.+. +
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~-~~~-v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 155 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAG-ADQ-VVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSL 155 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTT-CSE-EEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcC-CCE-EEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHH
Confidence 455799999999999999888763 346 999999 4666654321 3788887766543 2
Q ss_pred -----CC-CceeeehhhhhcCChhHHHHHHHHHHHhcC---C--CcEEEEe
Q 021707 218 -----PA-ANAIFMKWVLATWTDDECKLIMENCYKALL---A--GGKLIAC 257 (309)
Q Consensus 218 -----p~-~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~---p--gG~l~i~ 257 (309)
+. .|+|++..++|+.++ ...+++.+++.|+ | ||+++++
T Consensus 156 ~~~~~~~~fD~Ii~~dvl~~~~~--~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 156 QRCTGLQRFQVVLLADLLSFHQA--HDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp HHHHSCSSBSEEEEESCCSCGGG--HHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred HhhccCCCCCEEEEeCcccChHH--HHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 22 499999999987554 4689999999999 9 9987664
No 203
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.81 E-value=1.9e-09 Score=96.63 Aligned_cols=97 Identities=20% Similarity=0.194 Sum_probs=72.6
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCC----------------CCCCceEEeCCCCCCC--CC-
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAP----------------SIPGVTHIGGDMFNSI--PA- 219 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~----------------~~~ri~~~~~d~~~~~--p~- 219 (309)
...+|||||||+|.++..++++ |..+ ++++|+ |.+++.++ ..+|++++.+|..+.. ++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~-v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-DVDE-VIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-CCSE-EEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-CCCE-EEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 4579999999999999999998 8778 999999 66766543 2368999999975432 33
Q ss_pred CceeeehhhhhcCChhH--HHHHHHHHHHhcCCCcEEEEec
Q 021707 220 ANAIFMKWVLATWTDDE--CKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 220 ~D~i~~~~vlh~~~d~~--~~~iL~~~~~aL~pgG~l~i~e 258 (309)
.|+|++....+..+... ..++++++++.|+|||.+++..
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 49999855433222222 2688999999999999998863
No 204
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.81 E-value=1.7e-09 Score=96.65 Aligned_cols=98 Identities=20% Similarity=0.166 Sum_probs=75.0
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC----------CCCceEEeCCCCCC---CCC-Cceee
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS----------IPGVTHIGGDMFNS---IPA-ANAIF 224 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~----------~~ri~~~~~d~~~~---~p~-~D~i~ 224 (309)
+..+|||||||+|.++.+++++.|..+ ++++|+ |.+++.+++ .+|++++.+|.++. .++ .|+|+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~-v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKK-ATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSE-EEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCce-EEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 457999999999999999998877778 999999 777776543 36899999998753 233 49999
Q ss_pred ehhhhhcCChh--HHHHHHHHHHHhcCCCcEEEEec
Q 021707 225 MKWVLATWTDD--ECKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 225 ~~~vlh~~~d~--~~~~iL~~~~~aL~pgG~l~i~e 258 (309)
+.-..+..+.. ...+++++++++|+|||.+++..
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 85433322211 12579999999999999998873
No 205
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.81 E-value=5.5e-09 Score=95.74 Aligned_cols=103 Identities=15% Similarity=0.174 Sum_probs=78.2
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHh-cCCCceEEEeec-hhHHhhCCC-----------------CCCceEE
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQK-HHFICEGINFDL-PEVVGEAPS-----------------IPGVTHI 209 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~~D~-p~~~~~a~~-----------------~~ri~~~ 209 (309)
..++..++ .....+|||||||+|.++..+++. .|+.+ ++++|. +.+++.+++ .++++++
T Consensus 95 ~~~l~~l~-~~~g~~VLDiG~G~G~~~~~la~~~g~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~ 172 (336)
T 2b25_A 95 NMILSMMD-INPGDTVLEAGSGSGGMSLFLSKAVGSQGR-VISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFI 172 (336)
T ss_dssp HHHHHHHT-CCTTCEEEEECCTTSHHHHHHHHHHCTTCE-EEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEE
T ss_pred HHHHHhcC-CCCCCEEEEeCCCcCHHHHHHHHHhCCCce-EEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEE
Confidence 34566665 667789999999999999999998 47788 999998 666666543 2589999
Q ss_pred eCCCCCC---CCC--CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 210 GGDMFNS---IPA--ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 210 ~~d~~~~---~p~--~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
.+|+.+. ++. .|+|++.. ++. ..+++++++.|+|||++++....
T Consensus 173 ~~d~~~~~~~~~~~~fD~V~~~~-----~~~--~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 173 HKDISGATEDIKSLTFDAVALDM-----LNP--HVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp ESCTTCCC-------EEEEEECS-----SST--TTTHHHHGGGEEEEEEEEEEESS
T ss_pred ECChHHcccccCCCCeeEEEECC-----CCH--HHHHHHHHHhcCCCcEEEEEeCC
Confidence 9999874 333 49998743 222 13799999999999999987653
No 206
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.80 E-value=2.5e-09 Score=97.36 Aligned_cols=98 Identities=18% Similarity=0.148 Sum_probs=76.4
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC-----------CCCceEEeCCCCCC---CCC-Ccee
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS-----------IPGVTHIGGDMFNS---IPA-ANAI 223 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~-----------~~ri~~~~~d~~~~---~p~-~D~i 223 (309)
...+|||||||+|..+..++++.|..+ ++++|+ +.+++.+++ .+|++++.+|..+. .++ .|+|
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~-v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEK-AVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCE-EEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCE-EEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 457999999999999999999878888 999999 667766542 36899999998763 233 4999
Q ss_pred eehhhhhc---CChhH--HHHHHHHHHHhcCCCcEEEEec
Q 021707 224 FMKWVLAT---WTDDE--CKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 224 ~~~~vlh~---~~d~~--~~~iL~~~~~aL~pgG~l~i~e 258 (309)
++....|. -+... ..+++++++++|+|||.+++..
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 98765543 11111 3689999999999999999874
No 207
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.79 E-value=8.8e-09 Score=93.37 Aligned_cols=96 Identities=13% Similarity=0.043 Sum_probs=69.2
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-----hhHHhhCC--CC--CCceEEeC-CCCCCCCC-Cceeeeh
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-----PEVVGEAP--SI--PGVTHIGG-DMFNSIPA-ANAIFMK 226 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-----p~~~~~a~--~~--~ri~~~~~-d~~~~~p~-~D~i~~~ 226 (309)
+....+|||||||+|.++..++++ .+ ++++|. +..++..+ .. ++++++.+ |+.+..+. .|+|++.
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~---~~-V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~~~~fD~V~sd 155 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL---KN-VREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIPPERCDTLLCD 155 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS---TT-EEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSCCCCCSEEEEC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc---CC-EEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCCcCCCCEEEEC
Confidence 455689999999999999999987 36 999998 43333322 12 67999999 98764333 5999986
Q ss_pred hhhh---cCChhH-HHHHHHHHHHhcCCCcEEEEe
Q 021707 227 WVLA---TWTDDE-CKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 227 ~vlh---~~~d~~-~~~iL~~~~~aL~pgG~l~i~ 257 (309)
..++ ...+.. ..++|+.+++.|+|||.+++.
T Consensus 156 ~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 156 IGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 5543 222222 236899999999999977763
No 208
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.79 E-value=2.9e-09 Score=92.77 Aligned_cols=96 Identities=19% Similarity=0.278 Sum_probs=63.8
Q ss_pred HHHHhhcCCCC-CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-CC--------ceEEe-CCCCCC
Q 021707 149 TSVLDSYNGFK-GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-PG--------VTHIG-GDMFNS 216 (309)
Q Consensus 149 ~~~~~~~~~~~-~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-~r--------i~~~~-~d~~~~ 216 (309)
..+++.+. .. ...+|||||||+|.++..+++.. ..+ ++++|+ +.+++.+++. ++ +.+.. .|+...
T Consensus 26 ~~~L~~~~-~~~~g~~VLDiGcGtG~~t~~la~~g-~~~-V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (232)
T 3opn_A 26 EKALKEFH-LEINGKTCLDIGSSTGGFTDVMLQNG-AKL-VYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQG 102 (232)
T ss_dssp HHHHHHTT-CCCTTCEEEEETCTTSHHHHHHHHTT-CSE-EEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSC
T ss_pred HHHHHHcC-CCCCCCEEEEEccCCCHHHHHHHhcC-CCE-EEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcC
Confidence 44556664 33 35699999999999999999883 237 999998 5666654332 33 33333 233221
Q ss_pred CCC---CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEe
Q 021707 217 IPA---ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 217 ~p~---~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
.+. .|+++++. .++|++++++|+|||++++.
T Consensus 103 ~~d~~~~D~v~~~l----------~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 103 RPSFTSIDVSFISL----------DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp CCSEEEECCSSSCG----------GGTHHHHHHHSCTTCEEEEE
T ss_pred CCCEEEEEEEhhhH----------HHHHHHHHHhccCCCEEEEE
Confidence 222 25554432 47999999999999999986
No 209
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.79 E-value=2.6e-09 Score=97.58 Aligned_cols=98 Identities=16% Similarity=0.107 Sum_probs=74.5
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC----------CCCceEEeCCCCCC---CCC-Cceee
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS----------IPGVTHIGGDMFNS---IPA-ANAIF 224 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~----------~~ri~~~~~d~~~~---~p~-~D~i~ 224 (309)
...+|||||||+|..+.+++++.|..+ ++++|+ +.+++.+++ .+|++++.+|..+. .++ .|+|+
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~-v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVEN-IDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCE-EEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCE-EEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 457999999999999999998878888 999999 677766542 26899999998653 233 49999
Q ss_pred ehhhhhcCChhHH--HHHHHHHHHhcCCCcEEEEec
Q 021707 225 MKWVLATWTDDEC--KLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 225 ~~~vlh~~~d~~~--~~iL~~~~~aL~pgG~l~i~e 258 (309)
+...-+.-+.... .++++++++.|+|||.+++..
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 7542221111211 689999999999999998863
No 210
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.78 E-value=2.2e-09 Score=98.59 Aligned_cols=99 Identities=19% Similarity=0.198 Sum_probs=75.6
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC----------CCCceEEeCCCCCC---CC-C-Cc
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS----------IPGVTHIGGDMFNS---IP-A-AN 221 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~----------~~ri~~~~~d~~~~---~p-~-~D 221 (309)
.....+|||||||+|..+..++++.|..+ ++++|+ +.+++.+++ .+|++++.+|+++. .+ . .|
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~-V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fD 196 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQ-IDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYD 196 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCE-EEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCE-EEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCcc
Confidence 34567999999999999999999888888 999999 677776653 26899999998653 33 2 49
Q ss_pred eeeehhhhhcCChhH--HHHHHHHHHHhcCCCcEEEEe
Q 021707 222 AIFMKWVLATWTDDE--CKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 222 ~i~~~~vlh~~~d~~--~~~iL~~~~~aL~pgG~l~i~ 257 (309)
+|++....+..+.+. ..+++++++++|+|||.+++.
T Consensus 197 lIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 197 AVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 999854321111111 368999999999999999886
No 211
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.77 E-value=2.7e-09 Score=96.79 Aligned_cols=100 Identities=15% Similarity=0.146 Sum_probs=74.3
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC----------CCCceEEeCCCCCC---CCC-Cce
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS----------IPGVTHIGGDMFNS---IPA-ANA 222 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~----------~~ri~~~~~d~~~~---~p~-~D~ 222 (309)
..+..+|||||||+|.++.+++++.|..+ ++++|+ +.+++.+++ .+|++++.+|.++. .++ .|+
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~-v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~ 171 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHPSVES-VVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDV 171 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCE-EEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHcCCCCE-EEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceE
Confidence 34567999999999999999999888888 999999 677766653 36899999998653 223 499
Q ss_pred eeehhhhhcCChh--HHHHHHHHHHHhcCCCcEEEEec
Q 021707 223 IFMKWVLATWTDD--ECKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 223 i~~~~vlh~~~d~--~~~~iL~~~~~aL~pgG~l~i~e 258 (309)
|++....+..+.. ...++++++++.|+|||.+++..
T Consensus 172 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 172 IITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 9985443322211 23578999999999999998865
No 212
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.77 E-value=2.6e-09 Score=97.25 Aligned_cols=98 Identities=20% Similarity=0.202 Sum_probs=71.7
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC----------CCCceEEeCCCCCCC---CC-Cceee
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS----------IPGVTHIGGDMFNSI---PA-ANAIF 224 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~----------~~ri~~~~~d~~~~~---p~-~D~i~ 224 (309)
+..+|||||||+|..+..++++.|..+ ++++|+ +.+++.+++ .+|++++.+|..+.. ++ .|+|+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~-v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEK-VTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCE-EEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCE-EEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 457999999999999999999888888 999999 677766542 268999999987632 23 49999
Q ss_pred ehhhhhcCChhHH--HHHHHHHHHhcCCCcEEEEec
Q 021707 225 MKWVLATWTDDEC--KLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 225 ~~~vlh~~~d~~~--~~iL~~~~~aL~pgG~l~i~e 258 (309)
+...-|.-++... .++++++++.|+|||.+++..
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 7543222222221 689999999999999998875
No 213
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.76 E-value=1.3e-10 Score=101.29 Aligned_cols=93 Identities=15% Similarity=0.054 Sum_probs=75.0
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCCCCC--Cceeeehhhh
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNSIPA--ANAIFMKWVL 229 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~~p~--~D~i~~~~vl 229 (309)
...+|||+|||+|.++..+++.. .+ ++++|. +.+++.++++ ++++++.+|+.+..+. .|+|++...+
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MR-VIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPW 154 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CE-EEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCC
T ss_pred CCCEEEECccccCHHHHHHHHcC--CE-EEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCc
Confidence 45799999999999999999874 67 999998 6777777642 4899999999765332 4999999999
Q ss_pred hcCChhHHHHHHHHHHHhcCCCcEEEEe
Q 021707 230 ATWTDDECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 230 h~~~d~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
|+..+.. ..+.++++.|+|||.+++.
T Consensus 155 ~~~~~~~--~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 155 GGPDYAT--AETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp SSGGGGG--SSSBCTTTSCSSCHHHHHH
T ss_pred CCcchhh--hHHHHHHhhcCCcceeHHH
Confidence 8876653 3677889999999985544
No 214
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.76 E-value=2.2e-09 Score=94.29 Aligned_cols=104 Identities=9% Similarity=-0.030 Sum_probs=84.8
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-----CCceEEeCCCCCCCCC--Cceeeehhhhh
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-----PGVTHIGGDMFNSIPA--ANAIFMKWVLA 230 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-----~ri~~~~~d~~~~~p~--~D~i~~~~vlh 230 (309)
..+.+|||||||.|-++..+...+|..+ ++++|. +.+++.++++ .+.++...|+....|. +|++++.-++|
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~-y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~lkti~ 209 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETV-YIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTLP 209 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCE-EEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEETTCHH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCE-EEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHHHHHH
Confidence 3477999999999999999999999999 999999 6777776653 5588889999887444 49999999999
Q ss_pred cCChhHHHHHHHHHHHhcCCCcEEEEecc--ccCCC
Q 021707 231 TWTDDECKLIMENCYKALLAGGKLIACEP--VLLDD 264 (309)
Q Consensus 231 ~~~d~~~~~iL~~~~~aL~pgG~l~i~e~--~~~~~ 264 (309)
++.+++....+ ++.++|+|+|.++..+. +-...
T Consensus 210 ~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs 244 (281)
T 3lcv_B 210 CLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRS 244 (281)
T ss_dssp HHHHHSTTHHH-HHHHHSSCSEEEEEEECC------
T ss_pred HhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCC
Confidence 99888766677 89999999998888877 44443
No 215
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.76 E-value=4.2e-09 Score=94.60 Aligned_cols=102 Identities=17% Similarity=0.269 Sum_probs=73.5
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCC-CC
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNS-IP 218 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~-~p 218 (309)
...+++.++ .....+|||||||+|.++..+++... + ++++|. +.+++.+++. ++++++.+|+.+. ++
T Consensus 17 ~~~i~~~~~-~~~~~~VLDiG~G~G~lt~~L~~~~~--~-v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~ 92 (285)
T 1zq9_A 17 INSIIDKAA-LRPTDVVLEVGPGTGNMTVKLLEKAK--K-VVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP 92 (285)
T ss_dssp HHHHHHHTC-CCTTCEEEEECCTTSTTHHHHHHHSS--E-EEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC
T ss_pred HHHHHHhcC-CCCCCEEEEEcCcccHHHHHHHhhCC--E-EEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch
Confidence 455666665 66678999999999999999999853 6 999998 6677665431 5799999999874 66
Q ss_pred CCceeeehhhhhcCChhHHHHHHH--------------HH--HHhcCCCcEE
Q 021707 219 AANAIFMKWVLATWTDDECKLIME--------------NC--YKALLAGGKL 254 (309)
Q Consensus 219 ~~D~i~~~~vlh~~~d~~~~~iL~--------------~~--~~aL~pgG~l 254 (309)
..|+|+++ ..++|..+...++|. ++ +.+++|||++
T Consensus 93 ~fD~vv~n-lpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~ 143 (285)
T 1zq9_A 93 FFDTCVAN-LPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKL 143 (285)
T ss_dssp CCSEEEEE-CCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTT
T ss_pred hhcEEEEe-cCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCcc
Confidence 56988874 334444444444442 22 4688999865
No 216
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.76 E-value=7.8e-09 Score=87.30 Aligned_cols=94 Identities=14% Similarity=0.157 Sum_probs=69.7
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-CCceEEeCCCCCCCCC-CceeeehhhhhcCCh
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-PGVTHIGGDMFNSIPA-ANAIFMKWVLATWTD 234 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-~ri~~~~~d~~~~~p~-~D~i~~~~vlh~~~d 234 (309)
.....+|||+|||+|.++..+++. +..+ ++++|. +.+++.++++ .+++++.+|+.+ +|. .|+|++...+|++.+
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~-~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~-~~~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLL-GAES-VTAFDIDPDAIETAKRNCGGVNFMVADVSE-ISGKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHT-TBSE-EEEEESCHHHHHHHHHHCTTSEEEECCGGG-CCCCEEEEEECCCC-----
T ss_pred CCCCCEEEEEeCCccHHHHHHHHc-CCCE-EEEEECCHHHHHHHHHhcCCCEEEECcHHH-CCCCeeEEEECCCchhccC
Confidence 335679999999999999999987 4456 999998 7788777654 389999999976 454 499999999998876
Q ss_pred hHHHHHHHHHHHhcCCCcEEEEe
Q 021707 235 DECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 235 ~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
....++++++.+.+ |+ ++++
T Consensus 126 ~~~~~~l~~~~~~~--g~-~~~~ 145 (200)
T 1ne2_A 126 HSDRAFIDKAFETS--MW-IYSI 145 (200)
T ss_dssp --CHHHHHHHHHHE--EE-EEEE
T ss_pred chhHHHHHHHHHhc--Cc-EEEE
Confidence 55568899999998 44 4444
No 217
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.76 E-value=8.2e-09 Score=88.77 Aligned_cols=93 Identities=19% Similarity=0.134 Sum_probs=73.8
Q ss_pred CCCcceEEEecCCccHHHHHHHHhc-CCCceEEEeec-hhHHhhCCC-----------CCCceEEeCCCCCCCC-C--Cc
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKH-HFICEGINFDL-PEVVGEAPS-----------IPGVTHIGGDMFNSIP-A--AN 221 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~~D~-p~~~~~a~~-----------~~ri~~~~~d~~~~~p-~--~D 221 (309)
.....+|||||||+|.++..+++.+ |..+ ++++|. +.+++.+++ .++++++.+|..+..+ . .|
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 153 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGK-VIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYD 153 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCE-EEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcE-EEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcC
Confidence 4456799999999999999999986 6678 999998 667766653 2489999999875432 2 49
Q ss_pred eeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecc
Q 021707 222 AIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 222 ~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
+|++...++++. +++++.|+|||++++...
T Consensus 154 ~i~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 154 AIHVGAAAPVVP--------QALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EEEECSBBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred EEEECCchHHHH--------HHHHHhcCCCcEEEEEEe
Confidence 999988887654 568899999999998743
No 218
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.76 E-value=9.9e-09 Score=93.43 Aligned_cols=110 Identities=15% Similarity=0.106 Sum_probs=80.6
Q ss_pred HHhhcCCCCCcceEEEecCCccHHHHHHHHhcCC-CceEEEeec-hhHHhhCCCC------CCceEEeCCCCCC--CCC-
Q 021707 151 VLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHF-ICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNS--IPA- 219 (309)
Q Consensus 151 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~--~p~- 219 (309)
+...++ ...+.+|||+|||+|..+..+++.+++ .+ ++++|. +.+++.++++ .+++++.+|+.+. .+.
T Consensus 110 ~~~~l~-~~~g~~VLDlg~G~G~~t~~la~~~~~~~~-v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~ 187 (315)
T 1ixk_A 110 PPVALD-PKPGEIVADMAAAPGGKTSYLAQLMRNDGV-IYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVE 187 (315)
T ss_dssp HHHHHC-CCTTCEEEECCSSCSHHHHHHHHHTTTCSE-EEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCC
T ss_pred HHHHhC-CCCCCEEEEeCCCCCHHHHHHHHHhCCCCE-EEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccccccc
Confidence 344454 566789999999999999999999754 67 999998 6677766542 5799999998764 233
Q ss_pred Cceeeeh------hhhhc-------CChhH-------HHHHHHHHHHhcCCCcEEEEeccccC
Q 021707 220 ANAIFMK------WVLAT-------WTDDE-------CKLIMENCYKALLAGGKLIACEPVLL 262 (309)
Q Consensus 220 ~D~i~~~------~vlh~-------~~d~~-------~~~iL~~~~~aL~pgG~l~i~e~~~~ 262 (309)
.|+|++. .+++. |+.++ ..++|+++++.|+|||++++......
T Consensus 188 fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~ 250 (315)
T 1ixk_A 188 FDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLE 250 (315)
T ss_dssp EEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred CCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCC
Confidence 4999873 22332 33222 25899999999999999998765443
No 219
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.75 E-value=3.2e-09 Score=94.67 Aligned_cols=100 Identities=14% Similarity=0.060 Sum_probs=80.8
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCC-CCC-Cceeeehhh
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNS-IPA-ANAIFMKWV 228 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~-~p~-~D~i~~~~v 228 (309)
+.+..+|||+|||+|.++..+++.++..+ ++++|. |.+++.++++ ++++++.+|+.+. .+. .|+|++...
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~-V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d~p 195 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKL-VYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYV 195 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSE-EEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEECCC
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCE-EEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEECCc
Confidence 45667999999999999999999988888 999999 7777777642 5789999999875 222 499988654
Q ss_pred hhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 229 LATWTDDECKLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 229 lh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
. ...++++++.+.|+|||.+++.+....++
T Consensus 196 ~------~~~~~l~~~~~~LkpgG~l~~s~~~~~~~ 225 (272)
T 3a27_A 196 H------KTHKFLDKTFEFLKDRGVIHYHETVAEKI 225 (272)
T ss_dssp S------SGGGGHHHHHHHEEEEEEEEEEEEEEGGG
T ss_pred c------cHHHHHHHHHHHcCCCCEEEEEEcCcccc
Confidence 2 33578999999999999999988776554
No 220
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.75 E-value=4.4e-09 Score=89.41 Aligned_cols=96 Identities=8% Similarity=-0.028 Sum_probs=72.3
Q ss_pred cceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCC--CC-C-Cceeeehhhh
Q 021707 161 VKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNS--IP-A-ANAIFMKWVL 229 (309)
Q Consensus 161 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~--~p-~-~D~i~~~~vl 229 (309)
..+|||+|||+|.++..++++.. .+ ++++|. +.+++.++++ ++++++.+|+.+. .+ . .|+|++...+
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~-~~-V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYA-AG-ATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTC-SE-EEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCeEEEeCCCcCHHHHHHHhcCC-CE-EEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 46899999999999999887753 36 999998 7788777642 5899999998663 22 2 4999987665
Q ss_pred hcCChhHHHHHHHHHHHh--cCCCcEEEEecccc
Q 021707 230 ATWTDDECKLIMENCYKA--LLAGGKLIACEPVL 261 (309)
Q Consensus 230 h~~~d~~~~~iL~~~~~a--L~pgG~l~i~e~~~ 261 (309)
| .. ...++++.+.+. |+|||++++.....
T Consensus 133 ~-~~--~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 133 R-RG--LLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp S-TT--THHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred C-CC--cHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 5 22 335678888764 99999998775543
No 221
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.73 E-value=1.4e-08 Score=90.05 Aligned_cols=89 Identities=16% Similarity=0.094 Sum_probs=73.0
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC----------CCceEEeCCCCCCCCCCceeeehh
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI----------PGVTHIGGDMFNSIPAANAIFMKW 227 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~----------~ri~~~~~d~~~~~p~~D~i~~~~ 227 (309)
.++.+|||||||+|..+.+++++ + .+ ++++|+ +.+++.++++ +|++++.+|..+.....|+|++.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~-~~-v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~Ii~d- 146 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D-TH-IDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFCL- 146 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S-CE-EEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEES-
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C-CE-EEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEEEEC-
Confidence 34579999999999999999988 7 77 999999 7888888753 58999999987655234999975
Q ss_pred hhhcCChhHHHHHHHHHHHhcCCCcEEEEe
Q 021707 228 VLATWTDDECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 228 vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
.++.. ..++++++.|+|||.+++.
T Consensus 147 ----~~dp~--~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 147 ----QEPDI--HRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp ----SCCCH--HHHHHHHTTEEEEEEEEEE
T ss_pred ----CCChH--HHHHHHHHhcCCCcEEEEE
Confidence 24443 4899999999999999886
No 222
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.72 E-value=4e-09 Score=95.26 Aligned_cols=98 Identities=19% Similarity=0.225 Sum_probs=72.3
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC----------CCCceEEeCCCCCC---CCC-Cceee
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS----------IPGVTHIGGDMFNS---IPA-ANAIF 224 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~----------~~ri~~~~~d~~~~---~p~-~D~i~ 224 (309)
+..+|||||||+|..+..++++.|..+ ++++|+ +.+++.+++ .+|++++.+|..+. .++ .|+|+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~-v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEK-AILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSE-EEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCE-EEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 457999999999999999999878888 999999 667766543 36899999997653 223 49999
Q ss_pred ehhhhhcCChh---HHHHHHHHHHHhcCCCcEEEEec
Q 021707 225 MKWVLATWTDD---ECKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 225 ~~~vlh~~~d~---~~~~iL~~~~~aL~pgG~l~i~e 258 (309)
+.-.-+..... ...++++++++.|+|||.+++.-
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 74322201111 12589999999999999998863
No 223
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.68 E-value=2.8e-08 Score=86.43 Aligned_cols=96 Identities=8% Similarity=-0.002 Sum_probs=78.9
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC-----CCCceEEeCCCCCC-CCC-Cceeeehhhh
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS-----IPGVTHIGGDMFNS-IPA-ANAIFMKWVL 229 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~-----~~ri~~~~~d~~~~-~p~-~D~i~~~~vl 229 (309)
+..+.+|||||||.|-++..+. |..+ ++++|+ +.+++.+++ ..+.++...|.... .|. +|++++.-++
T Consensus 103 ~~~p~~VLDlGCG~gpLal~~~---~~~~-y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLllk~l 178 (253)
T 3frh_A 103 AETPRRVLDIACGLNPLALYER---GIAS-VWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIFKLL 178 (253)
T ss_dssp SCCCSEEEEETCTTTHHHHHHT---TCSE-EEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEESCH
T ss_pred CCCCCeEEEecCCccHHHHHhc---cCCe-EEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHHHHH
Confidence 4457899999999999999887 8888 999999 677777664 26788899999876 444 4999999999
Q ss_pred hcCChhHHHHHHHHHHHhcCCCcEEEEec
Q 021707 230 ATWTDDECKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 230 h~~~d~~~~~iL~~~~~aL~pgG~l~i~e 258 (309)
|++.+++....+ ++.++|++++.++-.+
T Consensus 179 h~LE~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 179 PLLEREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp HHHHHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred HHhhhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 998877655555 8999999998877776
No 224
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.66 E-value=1.9e-08 Score=93.55 Aligned_cols=93 Identities=19% Similarity=0.204 Sum_probs=69.2
Q ss_pred cceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCC-------CCCceEEeCCCCCC-CCC-Cceeeehhhhhc
Q 021707 161 VKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPS-------IPGVTHIGGDMFNS-IPA-ANAIFMKWVLAT 231 (309)
Q Consensus 161 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~-------~~ri~~~~~d~~~~-~p~-~D~i~~~~vlh~ 231 (309)
+.+|||||||+|.++...++.. ..+ ++++|..++++.|++ .++|+++.+|+.+. +|+ +|+|+.-+.-+.
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aG-A~~-V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~~ 161 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAG-ARR-VYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYG 161 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTT-CSE-EEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBTT
T ss_pred CCEEEEeCCCccHHHHHHHHhC-CCE-EEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeeccccc
Confidence 4689999999999988777653 235 999998766666553 27899999999775 666 599986433222
Q ss_pred C-ChhHHHHHHHHHHHhcCCCcEEE
Q 021707 232 W-TDDECKLIMENCYKALLAGGKLI 255 (309)
Q Consensus 232 ~-~d~~~~~iL~~~~~aL~pgG~l~ 255 (309)
+ .+.....++....+.|+|||.++
T Consensus 162 l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 162 LLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp BTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred ccccchhhhHHHHHHhhCCCCceEC
Confidence 2 23345688888899999999876
No 225
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.65 E-value=4.9e-08 Score=93.16 Aligned_cols=111 Identities=14% Similarity=0.135 Sum_probs=82.9
Q ss_pred HhhcCCCCCcceEEEecCCccHHHHHHHHhcCC-CceEEEeec-hhHHhhCCC------CCCceEEeCCCCCC---CC-C
Q 021707 152 LDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHF-ICEGINFDL-PEVVGEAPS------IPGVTHIGGDMFNS---IP-A 219 (309)
Q Consensus 152 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~~D~-p~~~~~a~~------~~ri~~~~~d~~~~---~p-~ 219 (309)
...++ ...+.+|||+|||+|..+..+++..++ .+ ++++|. +..++.+++ .++++++.+|+.+. ++ .
T Consensus 252 ~~~l~-~~~g~~VLDlgaG~G~~t~~la~~~~~~~~-v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~ 329 (450)
T 2yxl_A 252 SIVLD-PKPGETVVDLAAAPGGKTTHLAELMKNKGK-IYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEE 329 (450)
T ss_dssp HHHHC-CCTTCEEEESSCTTCHHHHHHHHHTTTCSE-EEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSS
T ss_pred HHhcC-CCCcCEEEEeCCCccHHHHHHHHHcCCCCE-EEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccC
Confidence 34444 556779999999999999999999887 67 999998 556665543 25799999998764 33 3
Q ss_pred -Cceeee------hhhhhcCChh-------HH-------HHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 220 -ANAIFM------KWVLATWTDD-------EC-------KLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 220 -~D~i~~------~~vlh~~~d~-------~~-------~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
.|+|++ ..+++..++. +. .++|+++.+.|+|||++++.+......
T Consensus 330 ~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ 395 (450)
T 2yxl_A 330 VADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKE 395 (450)
T ss_dssp CEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGG
T ss_pred CCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChh
Confidence 499985 3455544432 21 579999999999999999887665443
No 226
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.64 E-value=1.9e-08 Score=89.70 Aligned_cols=109 Identities=12% Similarity=0.025 Sum_probs=77.8
Q ss_pred hhcCCCCCcceEEEecCCccHHHHHHHHhcCC-CceEEEeec-hhHHhhCCCC------CCceEEeCCCCCC-C-----C
Q 021707 153 DSYNGFKGVKRLVDVGGSAGDCLRMILQKHHF-ICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNS-I-----P 218 (309)
Q Consensus 153 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~-~-----p 218 (309)
..++ ...+.+|||+|||+|..+..+++..++ .+ ++++|. +..++.++++ .+++++.+|+.+. . +
T Consensus 77 ~~l~-~~~g~~VLDlgaG~G~~t~~la~~~~~~~~-v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~ 154 (274)
T 3ajd_A 77 IVLN-PREDDFILDMCAAPGGKTTHLAQLMKNKGT-IVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNE 154 (274)
T ss_dssp HHHC-CCTTCEEEETTCTTCHHHHHHHHHTTTCSE-EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTT
T ss_pred HHhC-CCCcCEEEEeCCCccHHHHHHHHHcCCCCE-EEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhcc
Confidence 3443 556679999999999999999999877 67 999998 5666665432 5899999998653 1 3
Q ss_pred C-Cceeeeh------hhhhc---CCh-------hHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 219 A-ANAIFMK------WVLAT---WTD-------DECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 219 ~-~D~i~~~------~vlh~---~~d-------~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
. .|+|++. .+++. |+. ....++|+++.+.|+|||++++.......
T Consensus 155 ~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~ 216 (274)
T 3ajd_A 155 IFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEV 216 (274)
T ss_dssp CCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCT
T ss_pred ccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCCh
Confidence 3 4999875 22221 221 12368999999999999999987655443
No 227
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.62 E-value=7.2e-09 Score=101.79 Aligned_cols=103 Identities=10% Similarity=-0.013 Sum_probs=81.7
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC----C--CCceEEeCCCCCC---C-CC-Cceeeeh
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS----I--PGVTHIGGDMFNS---I-PA-ANAIFMK 226 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~----~--~ri~~~~~d~~~~---~-p~-~D~i~~~ 226 (309)
.++.+|||||||.|.++..+++. +.+ ++++|+ +.+++.|+. . -+|+|.+++..+. . +. .|+|++.
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~--ga~-V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~ 141 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK--GAT-IVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGL 141 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHhC--CCE-EEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEEC
Confidence 35679999999999999999998 567 999999 677776653 2 3689999988543 2 23 5999999
Q ss_pred hhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 227 WVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 227 ~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
.+|||.++.+...-+.++.+.|+++++.++...+..+.
T Consensus 142 e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~e~ 179 (569)
T 4azs_A 142 SVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAVKEE 179 (569)
T ss_dssp SCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCCTTS
T ss_pred cchhcCCCHHHHHHHHHHHHHhccccceeeEEeccccc
Confidence 99999998876666677888898888888887665554
No 228
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.61 E-value=8.1e-08 Score=90.34 Aligned_cols=107 Identities=16% Similarity=0.165 Sum_probs=78.3
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhc-CCCceEEEeec-hhHHhhCCCCCCceEEeCCCCCCCCC--Cceee
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKH-HFICEGINFDL-PEVVGEAPSIPGVTHIGGDMFNSIPA--ANAIF 224 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~~D~-p~~~~~a~~~~ri~~~~~d~~~~~p~--~D~i~ 224 (309)
..+++.++ .....+|||+|||+|.++.++++++ +..+ ++++|+ +.+++.+ .+++++.+|+++..+. .|+|+
T Consensus 29 ~~~~~~~~-~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~-i~gvDi~~~~~~~a---~~~~~~~~D~~~~~~~~~fD~Ii 103 (421)
T 2ih2_A 29 DFMVSLAE-APRGGRVLEPACAHGPFLRAFREAHGTAYR-FVGVEIDPKALDLP---PWAEGILADFLLWEPGEAFDLIL 103 (421)
T ss_dssp HHHHHHCC-CCTTCEEEEETCTTCHHHHHHHHHHCSCSE-EEEEESCTTTCCCC---TTEEEEESCGGGCCCSSCEEEEE
T ss_pred HHHHHhhc-cCCCCEEEECCCCChHHHHHHHHHhCCCCe-EEEEECCHHHHHhC---CCCcEEeCChhhcCccCCCCEEE
Confidence 44455553 3345699999999999999999987 6778 999999 6666666 6899999999876433 49999
Q ss_pred ehhhhh----------cCChhH-----------------HHHHHHHHHHhcCCCcEEEEeccc
Q 021707 225 MKWVLA----------TWTDDE-----------------CKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 225 ~~~vlh----------~~~d~~-----------------~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
++-... +.+++. ...+++++.+.|+|||+++++-+.
T Consensus 104 ~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 104 GNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp ECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred ECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 852211 122222 126799999999999999887543
No 229
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.61 E-value=2.9e-08 Score=91.29 Aligned_cols=99 Identities=15% Similarity=0.210 Sum_probs=78.6
Q ss_pred CcceEEEecCCccHHHHHHHHhcCC-----CceEEEeec-hhHHhhCCCC-----CCceEEeCCCCCCCC-C-Cceeeeh
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHF-----ICEGINFDL-PEVVGEAPSI-----PGVTHIGGDMFNSIP-A-ANAIFMK 226 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~-----~~~~~~~D~-p~~~~~a~~~-----~ri~~~~~d~~~~~p-~-~D~i~~~ 226 (309)
...+|+|+|||+|.++..+++..+. .+ ++++|+ +.+++.++.+ .+++++.+|.+++.+ . .|+|+++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~-v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~~~~~fD~Ii~N 208 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVH-ASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISD 208 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEE-EEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCCCCCCEEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCce-EEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCccccCCccEEEEC
Confidence 4679999999999999999998875 56 999998 6666666542 368999999988744 3 4999998
Q ss_pred hhhhcCChhHH----------------HHHHHHHHHhcCCCcEEEEecc
Q 021707 227 WVLATWTDDEC----------------KLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 227 ~vlh~~~d~~~----------------~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
-.+++++.++. ..+++++.+.|+|||+++++-+
T Consensus 209 PPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 209 LPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp CCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 77776654432 2589999999999999887753
No 230
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.59 E-value=8.6e-08 Score=81.10 Aligned_cols=94 Identities=12% Similarity=0.021 Sum_probs=72.5
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC----C-CceEEeCCCCCCCCCCceeeehhhhhcC
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI----P-GVTHIGGDMFNSIPAANAIFMKWVLATW 232 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~----~-ri~~~~~d~~~~~p~~D~i~~~~vlh~~ 232 (309)
....+|||+|||+|.++..+++..+ .+ ++++|. +.+++.++++ . +++++.+|+.+.....|+|++...+|.+
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~-~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~D~v~~~~p~~~~ 125 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGA-KE-VICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFNSRVDIVIMNPPFGSQ 125 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTC-SE-EEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCCCCCSEEEECCCCSSS
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCC-CE-EEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcCCCCCEEEEcCCCccc
Confidence 3467999999999999999998743 36 999998 6777766543 2 7999999997632235999999888887
Q ss_pred ChhHHHHHHHHHHHhcCCCcEEEEe
Q 021707 233 TDDECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 233 ~d~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
......++|+++.+.+ |+ +++.
T Consensus 126 ~~~~~~~~l~~~~~~l--~~-~~~~ 147 (207)
T 1wy7_A 126 RKHADRPFLLKAFEIS--DV-VYSI 147 (207)
T ss_dssp STTTTHHHHHHHHHHC--SE-EEEE
T ss_pred cCCchHHHHHHHHHhc--Cc-EEEE
Confidence 7555568899999998 44 4443
No 231
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.58 E-value=1.5e-08 Score=88.73 Aligned_cols=110 Identities=12% Similarity=0.113 Sum_probs=78.1
Q ss_pred cHHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC----CCceEEeCCCCCC-CCC-
Q 021707 147 FMTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI----PGVTHIGGDMFNS-IPA- 219 (309)
Q Consensus 147 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~----~ri~~~~~d~~~~-~p~- 219 (309)
....+++.++ .....+|||||||+|.++..+++.. .+ ++++|. +.+++.++++ ++++++.+|+.+. ++.
T Consensus 17 ~~~~i~~~~~-~~~~~~VLDiG~G~G~~~~~l~~~~--~~-v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~ 92 (245)
T 1yub_A 17 VLNQIIKQLN-LKETDTVYEIGTGKGHLTTKLAKIS--KQ-VTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNK 92 (245)
T ss_dssp THHHHHHHCC-CCSSEEEEECSCCCSSCSHHHHHHS--SE-EEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCS
T ss_pred HHHHHHHhcC-CCCCCEEEEEeCCCCHHHHHHHHhC--Ce-EEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccC
Confidence 3456677775 6677899999999999999999985 66 999999 6777777664 5799999999874 442
Q ss_pred CceeeehhhhhcCChhHHHHHH--------------HHHHHhcCCCcEEEEeccc
Q 021707 220 ANAIFMKWVLATWTDDECKLIM--------------ENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 220 ~D~i~~~~vlh~~~d~~~~~iL--------------~~~~~aL~pgG~l~i~e~~ 260 (309)
..+.++.+.-++.+.....+++ +.+.+.|+|||++.+....
T Consensus 93 ~~f~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~~ 147 (245)
T 1yub_A 93 QRYKIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLHT 147 (245)
T ss_dssp SEEEEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTTT
T ss_pred CCcEEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhee
Confidence 2334444443333333333333 5688899999988776543
No 232
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.55 E-value=1.1e-08 Score=84.52 Aligned_cols=87 Identities=14% Similarity=0.060 Sum_probs=68.6
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC--CCceEEeCCCCCC-C---CC--Cceeeehhh
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI--PGVTHIGGDMFNS-I---PA--ANAIFMKWV 228 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~--~ri~~~~~d~~~~-~---p~--~D~i~~~~v 228 (309)
...+.+|||||||. +.+|. +.+++.++++ .+++++.+|+.+. . +. .|+|++.++
T Consensus 10 ~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~ 72 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLV 72 (176)
T ss_dssp CCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCS
T ss_pred CCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECCh
Confidence 56678999999995 12676 6677777643 4699999998754 3 43 399999999
Q ss_pred hhcC-ChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 229 LATW-TDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 229 lh~~-~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
+|++ ++. .++|++++++|+|||++++.++....
T Consensus 73 l~~~~~~~--~~~l~~~~r~LkpgG~l~~~~~~~~~ 106 (176)
T 2ld4_A 73 PGSTTLHS--AEILAEIARILRPGGCLFLKEPVETA 106 (176)
T ss_dssp TTCCCCCC--HHHHHHHHHHEEEEEEEEEEEEEESS
T ss_pred hhhcccCH--HHHHHHHHHHCCCCEEEEEEcccccc
Confidence 9999 665 58999999999999999998776543
No 233
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.55 E-value=6.5e-08 Score=84.77 Aligned_cols=83 Identities=6% Similarity=0.168 Sum_probs=61.1
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC----CCCceEEeCCCCCC-CCC-C
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS----IPGVTHIGGDMFNS-IPA-A 220 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~----~~ri~~~~~d~~~~-~p~-~ 220 (309)
...+++.++ .....+|||||||+|.++..++++. .+ ++++|. +.+++.+++ .++++++.+|+.+. ++. .
T Consensus 19 ~~~i~~~~~-~~~~~~VLDiG~G~G~lt~~l~~~~--~~-v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~ 94 (244)
T 1qam_A 19 IDKIMTNIR-LNEHDNIFEIGSGKGHFTLELVQRC--NF-VTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQ 94 (244)
T ss_dssp HHHHHTTCC-CCTTCEEEEECCTTSHHHHHHHHHS--SE-EEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSC
T ss_pred HHHHHHhCC-CCCCCEEEEEeCCchHHHHHHHHcC--Ce-EEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCC
Confidence 455666664 6667899999999999999999986 56 999998 667666543 36899999999874 553 3
Q ss_pred ceeeehhhhhcCCh
Q 021707 221 NAIFMKWVLATWTD 234 (309)
Q Consensus 221 D~i~~~~vlh~~~d 234 (309)
++.++++..++++.
T Consensus 95 ~~~vv~nlPy~~~~ 108 (244)
T 1qam_A 95 SYKIFGNIPYNIST 108 (244)
T ss_dssp CCEEEEECCGGGHH
T ss_pred CeEEEEeCCcccCH
Confidence 55555555555443
No 234
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.53 E-value=7e-08 Score=87.15 Aligned_cols=101 Identities=13% Similarity=0.194 Sum_probs=69.9
Q ss_pred cHHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC------CCCceEEeCCCCCC-CC
Q 021707 147 FMTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS------IPGVTHIGGDMFNS-IP 218 (309)
Q Consensus 147 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~------~~ri~~~~~d~~~~-~p 218 (309)
+...+++..+ .....+|||||||+|.++..+++. ..+ ++++|. +.+++.+++ .++++++.+|+.+. .+
T Consensus 30 i~~~i~~~~~-~~~~~~VLDiG~G~G~lt~~La~~--~~~-v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~ 105 (299)
T 2h1r_A 30 ILDKIIYAAK-IKSSDIVLEIGCGTGNLTVKLLPL--AKK-VITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP 105 (299)
T ss_dssp HHHHHHHHHC-CCTTCEEEEECCTTSTTHHHHTTT--SSE-EEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC
T ss_pred HHHHHHHhcC-CCCcCEEEEEcCcCcHHHHHHHhc--CCE-EEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc
Confidence 3455666665 666789999999999999999987 346 999998 667766653 26899999999875 44
Q ss_pred CCceeeehhhhhcCChhHHHHHH---------------HHHHHhcCCCc
Q 021707 219 AANAIFMKWVLATWTDDECKLIM---------------ENCYKALLAGG 252 (309)
Q Consensus 219 ~~D~i~~~~vlh~~~d~~~~~iL---------------~~~~~aL~pgG 252 (309)
..|+|+++ ..++++.+...++| ..+.+.++|+|
T Consensus 106 ~~D~Vv~n-~py~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 106 KFDVCTAN-IPYKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp CCSEEEEE-CCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred cCCEEEEc-CCcccccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 46998874 44556666666666 33566777665
No 235
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.52 E-value=4.2e-08 Score=89.93 Aligned_cols=100 Identities=14% Similarity=0.115 Sum_probs=73.6
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------C-CceEEeCCCCCCC------CC-Ccee
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------P-GVTHIGGDMFNSI------PA-ANAI 223 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~-ri~~~~~d~~~~~------p~-~D~i 223 (309)
+..+|||+|||+|.++..+++... + ++++|. +.+++.++++ + +++++.+|+++.. .. .|+|
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga--~-V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~I 229 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGA--E-VTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC--E-EEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEE
T ss_pred CCCcEEEcccccCHHHHHHHHcCC--E-EEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEE
Confidence 456999999999999999998744 7 999998 6777777642 2 5999999987642 22 5999
Q ss_pred eehhhhhc-------C-ChhHHHHHHHHHHHhcCCCcEEEEeccccC
Q 021707 224 FMKWVLAT-------W-TDDECKLIMENCYKALLAGGKLIACEPVLL 262 (309)
Q Consensus 224 ~~~~vlh~-------~-~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~ 262 (309)
++.-.... + ..++..++++++.+.|+|||.+++......
T Consensus 230 i~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~ 276 (332)
T 2igt_A 230 LTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSI 276 (332)
T ss_dssp EECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCT
T ss_pred EECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCC
Confidence 98322100 0 023456899999999999999777655543
No 236
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.48 E-value=7e-08 Score=92.11 Aligned_cols=108 Identities=12% Similarity=0.086 Sum_probs=78.7
Q ss_pred HHhhcCCCCCcceEEEecCCccHHHHHHHHhcCC-CceEEEeec-hhHHhhCCCC------CCceEEeCCCCCC---CCC
Q 021707 151 VLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHF-ICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNS---IPA 219 (309)
Q Consensus 151 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~---~p~ 219 (309)
+...++ ...+.+|||+|||+|..+..+++..++ .+ ++++|. +.+++.++++ . |+++.+|..+. .+.
T Consensus 93 ~a~~L~-~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~-V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~ 169 (464)
T 3m6w_A 93 VGVLLD-PKPGERVLDLAAAPGGKTTHLAARMGGKGL-LLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGT 169 (464)
T ss_dssp HHHHHC-CCTTCEEEESSCTTCHHHHHHHHHTTTCSE-EEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCS
T ss_pred HHHhcC-cCCCCEEEEEcCCcCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccc
Confidence 344444 556789999999999999999999876 56 999998 6677666542 4 89999997653 233
Q ss_pred -Cceeee-------------hhhhhcCChhHH-------HHHHHHHHHhcCCCcEEEEecccc
Q 021707 220 -ANAIFM-------------KWVLATWTDDEC-------KLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 220 -~D~i~~-------------~~vlh~~~d~~~-------~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
.|+|++ ..+...|..++. .++|+++.+.|+|||+|+......
T Consensus 170 ~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 170 YFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp CEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred cCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 499985 122223443332 789999999999999998765443
No 237
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.48 E-value=2.3e-07 Score=87.89 Aligned_cols=110 Identities=15% Similarity=0.154 Sum_probs=80.9
Q ss_pred HhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-----CCceEEeCCCCCC---CC-C-C
Q 021707 152 LDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-----PGVTHIGGDMFNS---IP-A-A 220 (309)
Q Consensus 152 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-----~ri~~~~~d~~~~---~p-~-~ 220 (309)
...++ ...+.+|||+|||+|..+..+++..|+.+ ++++|. +..++.++++ -+++++.+|+.+. ++ . .
T Consensus 239 ~~~l~-~~~g~~VLDlgaG~G~~t~~la~~~~~~~-v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~f 316 (429)
T 1sqg_A 239 MTWLA-PQNGEHILDLCAAPGGKTTHILEVAPEAQ-VVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQF 316 (429)
T ss_dssp HHHHC-CCTTCEEEEESCTTCHHHHHHHHHCTTCE-EEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCE
T ss_pred HHHcC-CCCcCeEEEECCCchHHHHHHHHHcCCCE-EEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCC
Confidence 34444 55667999999999999999999998878 999998 5555554432 3589999999765 23 2 4
Q ss_pred ceeee------hhhhhcCCh-------hHH-------HHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 221 NAIFM------KWVLATWTD-------DEC-------KLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 221 D~i~~------~~vlh~~~d-------~~~-------~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
|+|++ ..+++..++ ++. .++|+++.+.|+|||++++....+..
T Consensus 317 D~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~ 379 (429)
T 1sqg_A 317 DRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLP 379 (429)
T ss_dssp EEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCG
T ss_pred CEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCh
Confidence 99985 234444333 222 58899999999999999998765543
No 238
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.45 E-value=3.4e-07 Score=87.90 Aligned_cols=103 Identities=18% Similarity=0.249 Sum_probs=77.0
Q ss_pred CcceEEEecCCccHHHHHHHHhcCC-CceEEEeec-hhHHhhCCCC------CCceEEeCCCCCC---CCC-Cceeeeh-
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHF-ICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNS---IPA-ANAIFMK- 226 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~---~p~-~D~i~~~- 226 (309)
.+.+|||+|||+|..+..+++..++ .+ ++++|. +.+++.++++ .+++++.+|..+. .+. .|.|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~-V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGA-ILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDA 195 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSE-EEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECC
Confidence 6689999999999999999998764 67 999998 6667666542 5799999998763 333 4999861
Q ss_pred -----hhhh-------cCChhH-------HHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 227 -----WVLA-------TWTDDE-------CKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 227 -----~vlh-------~~~d~~-------~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
.+++ .|+.++ ..++|+++.+.|+|||+|++.......
T Consensus 196 PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~ 251 (479)
T 2frx_A 196 PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQ 251 (479)
T ss_dssp CCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSS
T ss_pred CcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCc
Confidence 2232 344332 357899999999999999887654443
No 239
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.44 E-value=9.2e-08 Score=85.40 Aligned_cols=98 Identities=14% Similarity=0.007 Sum_probs=75.8
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC-------CCCceEEeCCCCCCCCC--Cceeeehh
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS-------IPGVTHIGGDMFNSIPA--ANAIFMKW 227 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~-------~~ri~~~~~d~~~~~p~--~D~i~~~~ 227 (309)
...+.+|||+|||+|.+++.++++. ..+ ++++|+ |..++.+++ .++++++.+|.++..+. +|.|++..
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g-~~~-V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~ 200 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYG-KAK-VIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGY 200 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHT-CCE-EEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhc-CCe-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECC
Confidence 3457899999999999999998763 567 999998 667766654 27899999999876444 59888763
Q ss_pred hhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 228 VLATWTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 228 vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
.. .+.+.|..+.+.|+|||.|.+.+.+..+
T Consensus 201 p~------~~~~~l~~a~~~lk~gG~ih~~~~~~e~ 230 (278)
T 3k6r_A 201 VV------RTHEFIPKALSIAKDGAIIHYHNTVPEK 230 (278)
T ss_dssp CS------SGGGGHHHHHHHEEEEEEEEEEEEEEGG
T ss_pred CC------cHHHHHHHHHHHcCCCCEEEEEeeeccc
Confidence 21 1246788888999999999888776544
No 240
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.36 E-value=1.9e-07 Score=85.71 Aligned_cols=94 Identities=12% Similarity=0.020 Sum_probs=73.8
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCCCCCCceeeehhhhh
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNSIPAANAIFMKWVLA 230 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~~p~~D~i~~~~vlh 230 (309)
....+|||+|||+|.++.. ++ ...+ ++++|. +.+++.++++ ++++++.+|.++.....|+|++.-.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~-V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~~~fD~Vi~dpP-- 267 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKK-IYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIMNLP-- 267 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEECCT--
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhcCCCcEEEECCc--
Confidence 3567999999999999999 76 4667 999998 7777776542 5899999999876633599998421
Q ss_pred cCChhHHHHHHHHHHHhcCCCcEEEEeccccC
Q 021707 231 TWTDDECKLIMENCYKALLAGGKLIACEPVLL 262 (309)
Q Consensus 231 ~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~ 262 (309)
....++++.+.+.|+|||.+++.+....
T Consensus 268 ----~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 268 ----KFAHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp ----TTGGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred ----HhHHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 1123789999999999999999887665
No 241
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.35 E-value=6.2e-07 Score=80.49 Aligned_cols=95 Identities=13% Similarity=0.069 Sum_probs=68.1
Q ss_pred CCCcceEEEecC------CccHHHHHHHHhcC-CCceEEEeechhHHhhCCCCCCceE-EeCCCCCC-CCC-Cceeeehh
Q 021707 158 FKGVKRLVDVGG------SAGDCLRMILQKHH-FICEGINFDLPEVVGEAPSIPGVTH-IGGDMFNS-IPA-ANAIFMKW 227 (309)
Q Consensus 158 ~~~~~~vlDvG~------G~G~~~~~l~~~~p-~~~~~~~~D~p~~~~~a~~~~ri~~-~~~d~~~~-~p~-~D~i~~~~ 227 (309)
.....+|||+|| |+|. ..+++..| +.+ ++++|+.+. .+++++ +.+|+.+. .+. .|+|++..
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~-V~gvDis~~------v~~v~~~i~gD~~~~~~~~~fD~Vvsn~ 131 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTL-LVDSDLNDF------VSDADSTLIGDCATVHTANKWDLIISDM 131 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCE-EEEEESSCC------BCSSSEEEESCGGGCCCSSCEEEEEECC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCE-EEEEECCCC------CCCCEEEEECccccCCccCcccEEEEcC
Confidence 556789999999 4477 44566666 678 999999544 147999 99999875 344 49999753
Q ss_pred hhhc-----CC----hhHHHHHHHHHHHhcCCCcEEEEecccc
Q 021707 228 VLAT-----WT----DDECKLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 228 vlh~-----~~----d~~~~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
..+. .. .....++|+.+++.|+|||++++..+..
T Consensus 132 ~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~ 174 (290)
T 2xyq_A 132 YDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 174 (290)
T ss_dssp CCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred CccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 2211 01 1234589999999999999999865443
No 242
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.35 E-value=6.1e-07 Score=84.03 Aligned_cols=110 Identities=5% Similarity=-0.075 Sum_probs=79.5
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCC--------------------------------------CceEE
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHF--------------------------------------ICEGI 189 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~--------------------------------------~~~~~ 189 (309)
+..++.... |....+|+|.+||+|.++++.+....+ .+ ++
T Consensus 190 Aa~ll~l~~-~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~-V~ 267 (393)
T 3k0b_A 190 AAALVLLTS-WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLN-II 267 (393)
T ss_dssp HHHHHHHSC-CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC-EE
T ss_pred HHHHHHHhC-CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCce-EE
Confidence 344555664 888889999999999999998876554 56 99
Q ss_pred Eeec-hhHHhhCCCC-------CCceEEeCCCCCC-CCC-Cceeeehhhhhc-C-ChhHHHHHHHHHHHhcCC--CcEEE
Q 021707 190 NFDL-PEVVGEAPSI-------PGVTHIGGDMFNS-IPA-ANAIFMKWVLAT-W-TDDECKLIMENCYKALLA--GGKLI 255 (309)
Q Consensus 190 ~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~-~p~-~D~i~~~~vlh~-~-~d~~~~~iL~~~~~aL~p--gG~l~ 255 (309)
++|. +.+++.++++ ++|+++.+|+++. .+. .|+|+++--.+. . .+++..++.+.+.+.|++ |++++
T Consensus 268 GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 347 (393)
T 3k0b_A 268 GGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVY 347 (393)
T ss_dssp EEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEE
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEE
Confidence 9998 7788777652 5799999999875 333 499998733221 1 124456677777777764 88888
Q ss_pred Eecc
Q 021707 256 ACEP 259 (309)
Q Consensus 256 i~e~ 259 (309)
|+..
T Consensus 348 iit~ 351 (393)
T 3k0b_A 348 VLTS 351 (393)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8744
No 243
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.33 E-value=3.1e-07 Score=85.48 Aligned_cols=97 Identities=11% Similarity=-0.061 Sum_probs=72.0
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCC-CC-C-Cceeeeh
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNS-IP-A-ANAIFMK 226 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~-~p-~-~D~i~~~ 226 (309)
+....+|||+|||+|.++.++++..+..+ ++++|. +.+++.++++ ++++++.+|+.+. .+ . .|+|+++
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~-v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~n 293 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGE-IIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISN 293 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSC-EEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEEC
Confidence 55678999999999999999999988778 999998 7788777653 5899999999874 33 3 4999986
Q ss_pred hhhhcCC------hhHHHHHHHHHHHhcCCCcEEEEe
Q 021707 227 WVLATWT------DDECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 227 ~vlh~~~------d~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
-..+... .+--.++++.+++.| +|+++++
T Consensus 294 pPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i 328 (373)
T 3tm4_A 294 LPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFI 328 (373)
T ss_dssp CCCC------CCHHHHHHHHHHHHHHHE--EEEEEEE
T ss_pred CCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEE
Confidence 4433211 111367889999988 4455544
No 244
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.33 E-value=1.8e-06 Score=80.55 Aligned_cols=110 Identities=10% Similarity=-0.029 Sum_probs=81.9
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCC--------------------------------------CceEE
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHF--------------------------------------ICEGI 189 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~--------------------------------------~~~~~ 189 (309)
+..++.... |.....|+|.+||+|.++++.+....+ .+ ++
T Consensus 183 Aaall~l~~-~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~-v~ 260 (384)
T 3ldg_A 183 AAAIILLSN-WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLD-IS 260 (384)
T ss_dssp HHHHHHHTT-CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC-EE
T ss_pred HHHHHHHhC-CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCce-EE
Confidence 344555554 888889999999999999998876554 56 99
Q ss_pred Eeec-hhHHhhCCCC-------CCceEEeCCCCCC-CCC-Cceeeehhhhhc-C-ChhHHHHHHHHHHHhcCC--CcEEE
Q 021707 190 NFDL-PEVVGEAPSI-------PGVTHIGGDMFNS-IPA-ANAIFMKWVLAT-W-TDDECKLIMENCYKALLA--GGKLI 255 (309)
Q Consensus 190 ~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~-~p~-~D~i~~~~vlh~-~-~d~~~~~iL~~~~~aL~p--gG~l~ 255 (309)
++|. +.+++.++++ ++|+++.+|+++. .+. .|+|+++--.+. + .+++..++.+.+.+.|++ |++++
T Consensus 261 GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 340 (384)
T 3ldg_A 261 GFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQF 340 (384)
T ss_dssp EEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEE
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEE
Confidence 9998 7788777652 5799999999875 333 499998743321 2 335667788888888875 89988
Q ss_pred Eecc
Q 021707 256 ACEP 259 (309)
Q Consensus 256 i~e~ 259 (309)
|+-.
T Consensus 341 iit~ 344 (384)
T 3ldg_A 341 ILTN 344 (384)
T ss_dssp EEES
T ss_pred EEEC
Confidence 8754
No 245
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.31 E-value=3e-07 Score=87.61 Aligned_cols=110 Identities=13% Similarity=0.119 Sum_probs=78.5
Q ss_pred HHhhcCCCCCcceEEEecCCccHHHHHHHHhcCC-CceEEEeec-hhHHhhCCCC------CCceEEeCCCCCC---CCC
Q 021707 151 VLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHF-ICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNS---IPA 219 (309)
Q Consensus 151 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~---~p~ 219 (309)
+...++ ...+.+|||+|||+|..+..+++..++ .+ ++++|. +..++.++++ .++.++.+|..+. .+.
T Consensus 97 ~~~~L~-~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~-V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~ 174 (456)
T 3m4x_A 97 VGTAAA-AKPGEKVLDLCAAPGGKSTQLAAQMKGKGL-LVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSG 174 (456)
T ss_dssp HHHHHC-CCTTCEEEESSCTTCHHHHHHHHHHTTCSE-EEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTT
T ss_pred HHHHcC-CCCCCEEEEECCCcCHHHHHHHHHcCCCCE-EEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccc
Confidence 344454 556789999999999999999998765 56 999998 6666665542 5799999987653 333
Q ss_pred -Cceeeehh------hh-------hcCChhH-------HHHHHHHHHHhcCCCcEEEEeccccC
Q 021707 220 -ANAIFMKW------VL-------ATWTDDE-------CKLIMENCYKALLAGGKLIACEPVLL 262 (309)
Q Consensus 220 -~D~i~~~~------vl-------h~~~d~~-------~~~iL~~~~~aL~pgG~l~i~e~~~~ 262 (309)
.|.|++.- ++ ..|..++ ..++|+++.+.|+|||+|+.......
T Consensus 175 ~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~ 238 (456)
T 3m4x_A 175 FFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFA 238 (456)
T ss_dssp CEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred cCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecc
Confidence 49998621 22 2233222 23889999999999999987654443
No 246
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.31 E-value=1.6e-07 Score=88.03 Aligned_cols=100 Identities=15% Similarity=0.093 Sum_probs=74.2
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCCC------CC-Cceee
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNSI------PA-ANAIF 224 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~~------p~-~D~i~ 224 (309)
+..+|||+|||+|.++..+++. +..+ ++++|. +.+++.++++ ++++++.+|+++.. +. .|+|+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~-v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi 294 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADE-VIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVV 294 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSE-EEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCE-EEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEE
Confidence 5679999999999999999987 3346 999998 6777766542 28999999987642 22 49999
Q ss_pred ehhhhhcCCh-------hHHHHHHHHHHHhcCCCcEEEEecccc
Q 021707 225 MKWVLATWTD-------DECKLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 225 ~~~vlh~~~d-------~~~~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
+.-.....+. ....++++++.+.|+|||.+++.....
T Consensus 295 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 295 LDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp ECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 8422111111 345789999999999999988886543
No 247
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.31 E-value=1.6e-07 Score=87.61 Aligned_cols=99 Identities=17% Similarity=0.101 Sum_probs=74.2
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCCC------CC-Cceeee
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNSI------PA-ANAIFM 225 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~~------p~-~D~i~~ 225 (309)
+..+|||+|||+|.++..+++. ..+ ++++|. +.+++.++++ ++++++.+|+++.. +. .|+|++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~-v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~ 285 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FRE-VVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVL 285 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEE-EEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCE-EEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEE
Confidence 5679999999999999999988 456 999998 6777776542 45999999987642 22 499997
Q ss_pred hhhhhcCCh-------hHHHHHHHHHHHhcCCCcEEEEecccc
Q 021707 226 KWVLATWTD-------DECKLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 226 ~~vlh~~~d-------~~~~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
.-.....+. ....++++++.+.|+|||.+++.....
T Consensus 286 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 286 DPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp CCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 322111111 345689999999999999998886543
No 248
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.24 E-value=3.2e-07 Score=85.73 Aligned_cols=99 Identities=10% Similarity=0.045 Sum_probs=72.4
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------C--CceEEeCCCCCCCC-------CCce
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------P--GVTHIGGDMFNSIP-------AANA 222 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~--ri~~~~~d~~~~~p-------~~D~ 222 (309)
.+..+|||+|||+|.++..+++.. ..+ ++++|. +.+++.++++ + +++++.+|+++..+ ..|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~-V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~ 288 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMA-TTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDI 288 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSE-EEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCE-EEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccE
Confidence 456799999999999999999863 235 999998 6777776642 3 89999999876321 2499
Q ss_pred eeehhhh-----hcCCh--hHHHHHHHHHHHhcCCCcEEEEecc
Q 021707 223 IFMKWVL-----ATWTD--DECKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 223 i~~~~vl-----h~~~d--~~~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
|++.-.. +...+ ....++++.+.+.|+|||.+++...
T Consensus 289 Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 289 IIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 332 (385)
T ss_dssp EEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 9974222 12222 2345788999999999999887754
No 249
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.22 E-value=1.9e-06 Score=80.46 Aligned_cols=110 Identities=14% Similarity=-0.003 Sum_probs=80.4
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCC--------------------------------------CceEE
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHF--------------------------------------ICEGI 189 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~--------------------------------------~~~~~ 189 (309)
+..++.... |....+|+|.+||+|.++++++....+ .+ ++
T Consensus 184 Aa~ll~~~~-~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~-V~ 261 (385)
T 3ldu_A 184 AAGLIYLTP-WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFK-IY 261 (385)
T ss_dssp HHHHHHTSC-CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCC-EE
T ss_pred HHHHHHhhC-CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCce-EE
Confidence 344555554 878889999999999999999877433 57 99
Q ss_pred Eeec-hhHHhhCCCC-------CCceEEeCCCCCCC-CC-Cceeeehhhhhc-CC-hhHHHHHHHHHHHhcCC--CcEEE
Q 021707 190 NFDL-PEVVGEAPSI-------PGVTHIGGDMFNSI-PA-ANAIFMKWVLAT-WT-DDECKLIMENCYKALLA--GGKLI 255 (309)
Q Consensus 190 ~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~~-p~-~D~i~~~~vlh~-~~-d~~~~~iL~~~~~aL~p--gG~l~ 255 (309)
++|. +.+++.++++ ++|++..+|+++.. +. .|+|+++-.... +. .++..++.+++.+.|++ |+.++
T Consensus 262 GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 341 (385)
T 3ldu_A 262 GYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYY 341 (385)
T ss_dssp EEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEE
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEE
Confidence 9998 7788887653 47999999998753 33 499998644321 12 34566777777777765 88888
Q ss_pred Eecc
Q 021707 256 ACEP 259 (309)
Q Consensus 256 i~e~ 259 (309)
|+..
T Consensus 342 iit~ 345 (385)
T 3ldu_A 342 LITS 345 (385)
T ss_dssp EEES
T ss_pred EEEC
Confidence 8744
No 250
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.22 E-value=7.7e-07 Score=84.70 Aligned_cols=110 Identities=15% Similarity=0.096 Sum_probs=79.0
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhc-------------CCCceEEEeec-hhHHhhCCCC------C--C
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKH-------------HFICEGINFDL-PEVVGEAPSI------P--G 205 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-------------p~~~~~~~~D~-p~~~~~a~~~------~--r 205 (309)
+..+++.+. .....+|+|.|||+|.++..+.+.. +..+ ++++|+ +.+++.++.+ . +
T Consensus 160 ~~~mv~~l~-~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~-i~G~Ei~~~~~~lA~~nl~l~g~~~~~ 237 (445)
T 2okc_A 160 IQAMVDCIN-PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKA-LHGVDNTPLVVTLASMNLYLHGIGTDR 237 (445)
T ss_dssp HHHHHHHHC-CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTT-EEEEESCHHHHHHHHHHHHHTTCCSSC
T ss_pred HHHHHHHhC-CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeE-EEEEeCCHHHHHHHHHHHHHhCCCcCC
Confidence 334455553 4456799999999999999988764 4567 999998 6666655431 2 7
Q ss_pred ceEEeCCCCCCC-C-CCceeeehhhhhcCChh---------------HHHHHHHHHHHhcCCCcEEEEecc
Q 021707 206 VTHIGGDMFNSI-P-AANAIFMKWVLATWTDD---------------ECKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 206 i~~~~~d~~~~~-p-~~D~i~~~~vlh~~~d~---------------~~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
++++++|.+... . ..|+|+++-.++..... .....++.+.+.|+|||++.++-+
T Consensus 238 ~~i~~gD~l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 238 SPIVCEDSLEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp CSEEECCTTTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCEeeCCCCCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 889999998753 2 35999987555432211 124789999999999999987764
No 251
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.20 E-value=1.7e-06 Score=85.23 Aligned_cols=126 Identities=18% Similarity=0.139 Sum_probs=82.6
Q ss_pred hhhhhhcCchHHHHHHHHhhcCCcccHHHHHhhcC---CCCCcceEEEecCCccHHHHHHHHhcC----CCceEEEeech
Q 021707 122 AYSYYGKMPEMNGLMRRAISGVSVPFMTSVLDSYN---GFKGVKRLVDVGGSAGDCLRMILQKHH----FICEGINFDLP 194 (309)
Q Consensus 122 ~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~---~~~~~~~vlDvG~G~G~~~~~l~~~~p----~~~~~~~~D~p 194 (309)
.|+.+++++..-+.|.+|+. ..+.+... ...+...|+|||||+|-+....+++.. .++ +.+++-.
T Consensus 323 tYevFEkD~vKy~~Ye~AI~-------~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vk-VyAVEkn 394 (637)
T 4gqb_A 323 TYEVFEKDPIKYSQYQQAIY-------KCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIK-LYAVEKN 394 (637)
T ss_dssp HHHHHTTCHHHHHHHHHHHH-------HHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEE-EEEEESC
T ss_pred hhhhhcCChhhHHHHHHHHH-------HHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcE-EEEEECC
Confidence 57778889888888888875 22333221 123456899999999998444444322 235 7889986
Q ss_pred hHHhhCCC-------CCCceEEeCCCCCC-CCC-CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEE
Q 021707 195 EVVGEAPS-------IPGVTHIGGDMFNS-IPA-ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLI 255 (309)
Q Consensus 195 ~~~~~a~~-------~~ri~~~~~d~~~~-~p~-~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~ 255 (309)
.+...+++ .++|+++.+|+.+- .|+ +|+|+.=+.=...-.+-...+|-...+-|+|||.++
T Consensus 395 p~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 395 PNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp HHHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred HHHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 66555543 28899999999875 776 599984221111122224467777788899998753
No 252
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.20 E-value=2.8e-06 Score=74.55 Aligned_cols=85 Identities=18% Similarity=0.207 Sum_probs=63.4
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC--CCceEEeCCCCCC-CCC-C-c
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI--PGVTHIGGDMFNS-IPA-A-N 221 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~--~ri~~~~~d~~~~-~p~-~-D 221 (309)
...+++..+ .....+|||||||+|.++..++++ +..+ ++++|. +.+++.++++ .+++++.+|+.+. ++. . +
T Consensus 20 ~~~iv~~~~-~~~~~~VLDiG~G~G~lt~~L~~~-~~~~-v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~ 96 (249)
T 3ftd_A 20 LKKIAEELN-IEEGNTVVEVGGGTGNLTKVLLQH-PLKK-LYVIELDREMVENLKSIGDERLEVINEDASKFPFCSLGKE 96 (249)
T ss_dssp HHHHHHHTT-CCTTCEEEEEESCHHHHHHHHTTS-CCSE-EEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGSCSS
T ss_pred HHHHHHhcC-CCCcCEEEEEcCchHHHHHHHHHc-CCCe-EEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhHccCC
Confidence 455666665 666789999999999999999987 4567 999999 6777777654 6799999999874 443 1 5
Q ss_pred eeeehhhhhcCChh
Q 021707 222 AIFMKWVLATWTDD 235 (309)
Q Consensus 222 ~i~~~~vlh~~~d~ 235 (309)
.+++.+.-++.+.+
T Consensus 97 ~~vv~NlPy~i~~~ 110 (249)
T 3ftd_A 97 LKVVGNLPYNVASL 110 (249)
T ss_dssp EEEEEECCTTTHHH
T ss_pred cEEEEECchhccHH
Confidence 56666665555443
No 253
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.18 E-value=4.4e-07 Score=85.03 Aligned_cols=97 Identities=18% Similarity=0.080 Sum_probs=72.6
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------C-CceEEeCCCCCCC------CC-Ccee
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------P-GVTHIGGDMFNSI------PA-ANAI 223 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~-ri~~~~~d~~~~~------p~-~D~i 223 (309)
+..+|||+|||+|.++..+++.. ..+ ++++|. +.+++.++++ + +++++.+|+++.. +. .|+|
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g-~~~-V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGG-CSQ-VVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTT-CSE-EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCC-CCE-EEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 45799999999999999999874 346 999998 6677666542 2 7899999987642 22 4999
Q ss_pred eehhhh--------hcCChhHHHHHHHHHHHhcCCCcEEEEecc
Q 021707 224 FMKWVL--------ATWTDDECKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 224 ~~~~vl--------h~~~d~~~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
++.-.. +... ....+++.++.+.|+|||.+++...
T Consensus 298 i~dpP~~~~~~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 298 VMDPPKFVENKSQLMGAC-RGYKDINMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp EECCSSTTTCSSSSSCCC-THHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EECCCCCCCChhHHHHHH-HHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 885321 1111 3457899999999999999888654
No 254
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.18 E-value=3e-06 Score=80.34 Aligned_cols=99 Identities=11% Similarity=0.127 Sum_probs=69.2
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCCCC---
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNSIP--- 218 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~~p--- 218 (309)
..+++.++ .....+|||+|||+|.++..+++. ..+ ++++|. +.+++.++++ ++++++.+|+.+.++
T Consensus 276 ~~~~~~l~-~~~~~~VLDlgcG~G~~~~~la~~--~~~-V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~ 351 (433)
T 1uwv_A 276 ARALEWLD-VQPEDRVLDLFCGMGNFTLPLATQ--AAS-VVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQP 351 (433)
T ss_dssp HHHHHHHT-CCTTCEEEEESCTTTTTHHHHHTT--SSE-EEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSG
T ss_pred HHHHHhhc-CCCCCEEEECCCCCCHHHHHHHhh--CCE-EEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhh
Confidence 34445553 556679999999999999999987 456 999998 6777777642 589999999987432
Q ss_pred ----CCceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEe
Q 021707 219 ----AANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 219 ----~~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
..|+|++.- |-..+.++++.+.+ ++|++.+++.
T Consensus 352 ~~~~~fD~Vv~dP-----Pr~g~~~~~~~l~~-~~p~~ivyvs 388 (433)
T 1uwv_A 352 WAKNGFDKVLLDP-----ARAGAAGVMQQIIK-LEPIRIVYVS 388 (433)
T ss_dssp GGTTCCSEEEECC-----CTTCCHHHHHHHHH-HCCSEEEEEE
T ss_pred hhcCCCCEEEECC-----CCccHHHHHHHHHh-cCCCeEEEEE
Confidence 249998732 22212245555543 6888766663
No 255
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.16 E-value=2.5e-06 Score=76.78 Aligned_cols=89 Identities=10% Similarity=0.077 Sum_probs=64.3
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC----CCCceEEeCCCCCC-CCC--
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS----IPGVTHIGGDMFNS-IPA-- 219 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~----~~ri~~~~~d~~~~-~p~-- 219 (309)
...+++..+ .....+|||||||+|.++..+++. ..+ ++++|. +.+++.+++ .++++++.+|+.+. ++.
T Consensus 39 ~~~Iv~~l~-~~~~~~VLEIG~G~G~lT~~La~~--~~~-V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~ 114 (295)
T 3gru_A 39 VNKAVESAN-LTKDDVVLEIGLGKGILTEELAKN--AKK-VYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLD 114 (295)
T ss_dssp HHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHH--SSE-EEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSC
T ss_pred HHHHHHhcC-CCCcCEEEEECCCchHHHHHHHhc--CCE-EEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCC
Confidence 455667765 666789999999999999999998 356 999998 667766654 37999999999874 555
Q ss_pred CceeeehhhhhcCChhHHHHHH
Q 021707 220 ANAIFMKWVLATWTDDECKLIM 241 (309)
Q Consensus 220 ~D~i~~~~vlh~~~d~~~~~iL 241 (309)
.|.|+.+. -++++.+-..++|
T Consensus 115 fD~Iv~Nl-Py~is~pil~~lL 135 (295)
T 3gru_A 115 FNKVVANL-PYQISSPITFKLI 135 (295)
T ss_dssp CSEEEEEC-CGGGHHHHHHHHH
T ss_pred ccEEEEeC-cccccHHHHHHHH
Confidence 48888553 3334433333333
No 256
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.14 E-value=3.5e-06 Score=79.69 Aligned_cols=89 Identities=8% Similarity=-0.040 Sum_probs=65.6
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCCCCC-Cceeeehhhhhc
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNSIPA-ANAIFMKWVLAT 231 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~~p~-~D~i~~~~vlh~ 231 (309)
+..+|||+|||+|.++..+++.. .+ ++++|. +.+++.++++ + ++++.+|+.+..+. .|+|++.-.-..
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~~--~~-V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~~~fD~Vv~dPPr~g 365 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKRG--FN-VKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSVKGFDTVIVDPPRAG 365 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHTT--CE-EEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCCTTCSEEEECCCTTC
T ss_pred CCCEEEEeeccchHHHHHHHHcC--CE-EEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCccCCCEEEEcCCccc
Confidence 45799999999999999999873 46 999998 6788777653 3 99999999876554 599998432111
Q ss_pred CChhHHHHHHHHHHHhcCCCcEEEEe
Q 021707 232 WTDDECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 232 ~~d~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
.. ..+++.+. .|+|+|.+++.
T Consensus 366 ~~----~~~~~~l~-~l~p~givyvs 386 (425)
T 2jjq_A 366 LH----PRLVKRLN-REKPGVIVYVS 386 (425)
T ss_dssp SC----HHHHHHHH-HHCCSEEEEEE
T ss_pred hH----HHHHHHHH-hcCCCcEEEEE
Confidence 11 13555554 48999988876
No 257
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.13 E-value=2e-06 Score=80.45 Aligned_cols=101 Identities=13% Similarity=0.047 Sum_probs=72.5
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-----CCceEEeCCCCCC---CCC-Cceeeehhhh
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-----PGVTHIGGDMFNS---IPA-ANAIFMKWVL 229 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-----~ri~~~~~d~~~~---~p~-~D~i~~~~vl 229 (309)
.+.+|||+|||+|.++..+++. +.+ ++++|+ +.+++.++++ -..++..+|.++. .+. .|+|++.-..
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~--ga~-V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~ 290 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARK--GAY-ALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPT 290 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCC
T ss_pred CCCeEEEcccchhHHHHHHHHc--CCe-EEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCc
Confidence 3679999999999999999987 556 999998 6777777653 1235778898764 233 5999875322
Q ss_pred hcCCh-------hHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 230 ATWTD-------DECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 230 h~~~d-------~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
...+. ..-.++++.+.+.|+|||+|++.......
T Consensus 291 f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~ 331 (393)
T 4dmg_A 291 LVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHL 331 (393)
T ss_dssp CCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCC
Confidence 11111 23458999999999999999877655443
No 258
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.11 E-value=1.4e-06 Score=80.18 Aligned_cols=98 Identities=13% Similarity=0.086 Sum_probs=69.1
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC--------------CCceEEeCCCCCCC------
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI--------------PGVTHIGGDMFNSI------ 217 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~--------------~ri~~~~~d~~~~~------ 217 (309)
+++.+|||||||+|..+.+++++.+ .+ ++++|+ |.+++.++++ +|++++.+|.++.+
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~-~~-Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~ 264 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKP-KM-VTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 264 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCC-SE-EEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEEECChhHHHHHHHHCCC-CE-EEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhcc
Confidence 3568999999999999999998865 67 999999 7777766531 27999999988642
Q ss_pred CC-Cceeeehhhh-h-cCCh--hHHHHHHHHH----HHhcCCCcEEEEec
Q 021707 218 PA-ANAIFMKWVL-A-TWTD--DECKLIMENC----YKALLAGGKLIACE 258 (309)
Q Consensus 218 p~-~D~i~~~~vl-h-~~~d--~~~~~iL~~~----~~aL~pgG~l~i~e 258 (309)
++ .|+|++--.- . .... .-..+.++.+ +++|+|||.+++.-
T Consensus 265 ~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 265 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 22 4999874321 1 0001 0123455555 99999999887763
No 259
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.10 E-value=2.5e-06 Score=76.43 Aligned_cols=98 Identities=18% Similarity=0.232 Sum_probs=73.7
Q ss_pred CCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC-----------CCCceEEeCCCCCCCC---C-Cce
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS-----------IPGVTHIGGDMFNSIP---A-ANA 222 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~-----------~~ri~~~~~d~~~~~p---~-~D~ 222 (309)
+++.+||-||+|.|..+.++++..|..+ ++++|+ |.|++.+++ .+|++++.+|.++.+. + .|+
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~-v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDv 160 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVES-ITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCE-EEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcce-EEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCE
Confidence 4568999999999999999998877777 999999 777776653 3899999999987632 2 398
Q ss_pred eeehhhhhcCChh---HHHHHHHHHHHhcCCCcEEEEec
Q 021707 223 IFMKWVLATWTDD---ECKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 223 i~~~~vlh~~~d~---~~~~iL~~~~~aL~pgG~l~i~e 258 (309)
|+.--. ...... -..+.++.++++|+|||.++..-
T Consensus 161 Ii~D~~-dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 161 IISDCT-DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEESCC-CCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEeCC-CcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 885321 001100 12478999999999999988764
No 260
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.09 E-value=1.5e-05 Score=73.96 Aligned_cols=102 Identities=17% Similarity=0.167 Sum_probs=72.9
Q ss_pred cceEEEecCCccHHHHHH--------HHhc-------CCCceEEEeechh-----HH---hhCCC----------C-CC-
Q 021707 161 VKRLVDVGGSAGDCLRMI--------LQKH-------HFICEGINFDLPE-----VV---GEAPS----------I-PG- 205 (309)
Q Consensus 161 ~~~vlDvG~G~G~~~~~l--------~~~~-------p~~~~~~~~D~p~-----~~---~~a~~----------~-~r- 205 (309)
.-+|+|+|||+|..+..+ .+++ |.++ +..-|+|. +. ...++ . .+
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~-v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFT-AFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEE-EEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCcee-EEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 578999999999988876 3444 7788 99999863 22 22211 0 11
Q ss_pred --ceEEeCCCCCC-CCC-C-ceeeehhhhhcCCh------------------------------------hHHHHHHHHH
Q 021707 206 --VTHIGGDMFNS-IPA-A-NAIFMKWVLATWTD------------------------------------DECKLIMENC 244 (309)
Q Consensus 206 --i~~~~~d~~~~-~p~-~-D~i~~~~vlh~~~d------------------------------------~~~~~iL~~~ 244 (309)
+.-++|.|+.. +|. . |+++.+.+||..++ .|-..+|+..
T Consensus 132 ~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp SEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556788765 776 3 99999999997651 1345679999
Q ss_pred HHhcCCCcEEEEeccccCC
Q 021707 245 YKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 245 ~~aL~pgG~l~i~e~~~~~ 263 (309)
++.|+|||++++.=.-.++
T Consensus 212 a~eL~pGG~mvl~~~gr~~ 230 (374)
T 3b5i_A 212 AAEVKRGGAMFLVCLGRTS 230 (374)
T ss_dssp HHHEEEEEEEEEEEEECCC
T ss_pred HHHhCCCCEEEEEEecCCC
Confidence 9999999999987665544
No 261
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.09 E-value=3.9e-06 Score=74.60 Aligned_cols=91 Identities=8% Similarity=0.001 Sum_probs=65.5
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC---CCCceEEeCCCCCC-CCC--C
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS---IPGVTHIGGDMFNS-IPA--A 220 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~---~~ri~~~~~d~~~~-~p~--~ 220 (309)
.+.+++..+ .... +|||||||+|.++..++++. .+ ++++|. +.+++.+++ .++++++.+|+++. ++. .
T Consensus 36 ~~~Iv~~~~-~~~~-~VLEIG~G~G~lt~~L~~~~--~~-V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~ 110 (271)
T 3fut_A 36 LRRIVEAAR-PFTG-PVFEVGPGLGALTRALLEAG--AE-VTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQ 110 (271)
T ss_dssp HHHHHHHHC-CCCS-CEEEECCTTSHHHHHHHHTT--CC-EEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCT
T ss_pred HHHHHHhcC-CCCC-eEEEEeCchHHHHHHHHHcC--CE-EEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccC
Confidence 345666665 6666 99999999999999999985 56 999998 666666543 36899999999874 442 2
Q ss_pred ceeeehhhhhcCChhHHHHHHHH
Q 021707 221 NAIFMKWVLATWTDDECKLIMEN 243 (309)
Q Consensus 221 D~i~~~~vlh~~~d~~~~~iL~~ 243 (309)
...+..|.-++.+.+-..++|..
T Consensus 111 ~~~iv~NlPy~iss~il~~ll~~ 133 (271)
T 3fut_A 111 GSLLVANLPYHIATPLVTRLLKT 133 (271)
T ss_dssp TEEEEEEECSSCCHHHHHHHHHH
T ss_pred ccEEEecCcccccHHHHHHHhcC
Confidence 33455666667776655555544
No 262
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.03 E-value=1.5e-06 Score=77.66 Aligned_cols=67 Identities=12% Similarity=0.181 Sum_probs=54.5
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCC--CceEEEeec-hhHHhhCCCC--CCceEEeCCCCCC
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHF--ICEGINFDL-PEVVGEAPSI--PGVTHIGGDMFNS 216 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~--~~~~~~~D~-p~~~~~a~~~--~ri~~~~~d~~~~ 216 (309)
...+++..+ .....+|||||||+|.++..++++.+. .+ ++++|. +.+++.++++ ++++++.+|+.+.
T Consensus 31 ~~~iv~~~~-~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~-V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 31 IDAIVAAIR-PERGERMVEIGPGLGALTGPVIARLATPGSP-LHAVELDRDLIGRLEQRFGELLELHAGDALTF 102 (279)
T ss_dssp HHHHHHHHC-CCTTCEEEEECCTTSTTHHHHHHHHCBTTBC-EEEEECCHHHHHHHHHHHGGGEEEEESCGGGC
T ss_pred HHHHHHhcC-CCCcCEEEEEccccHHHHHHHHHhCCCcCCe-EEEEECCHHHHHHHHHhcCCCcEEEECChhcC
Confidence 345666664 666789999999999999999998865 66 999998 6777777654 7899999999864
No 263
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.01 E-value=7.6e-06 Score=71.94 Aligned_cols=91 Identities=9% Similarity=0.041 Sum_probs=62.7
Q ss_pred cHHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC----CCceEEeCCCCCC-CCC-
Q 021707 147 FMTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI----PGVTHIGGDMFNS-IPA- 219 (309)
Q Consensus 147 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~----~ri~~~~~d~~~~-~p~- 219 (309)
+...+++..+ .....+|||||||+|.++. + ++.+..+ ++++|. +.+++.++++ ++++++.+|+.+. ++.
T Consensus 9 i~~~iv~~~~-~~~~~~VLEIG~G~G~lt~-l-~~~~~~~-v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~ 84 (252)
T 1qyr_A 9 VIDSIVSAIN-PQKGQAMVEIGPGLAALTE-P-VGERLDQ-LTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGEL 84 (252)
T ss_dssp HHHHHHHHHC-CCTTCCEEEECCTTTTTHH-H-HHTTCSC-EEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHH
T ss_pred HHHHHHHhcC-CCCcCEEEEECCCCcHHHH-h-hhCCCCe-EEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHh
Confidence 3455666665 6667899999999999999 5 4556666 999998 7788877653 5899999999873 322
Q ss_pred -----CceeeehhhhhcCChhHHHHHH
Q 021707 220 -----ANAIFMKWVLATWTDDECKLIM 241 (309)
Q Consensus 220 -----~D~i~~~~vlh~~~d~~~~~iL 241 (309)
.+.+++++.-++.+.+-..++|
T Consensus 85 ~~~~~~~~~vvsNlPY~i~~~il~~ll 111 (252)
T 1qyr_A 85 AEKMGQPLRVFGNLPYNISTPLMFHLF 111 (252)
T ss_dssp HHHHTSCEEEEEECCTTTHHHHHHHHH
T ss_pred hcccCCceEEEECCCCCccHHHHHHHH
Confidence 2345555555555444333333
No 264
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.99 E-value=3.8e-06 Score=84.31 Aligned_cols=99 Identities=13% Similarity=0.085 Sum_probs=73.0
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC--------CCceEEeCCCCCC---CCC-Cceeeeh
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI--------PGVTHIGGDMFNS---IPA-ANAIFMK 226 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~--------~ri~~~~~d~~~~---~p~-~D~i~~~ 226 (309)
++.+|||+|||+|.++..+++... .+ ++++|+ +.+++.++++ ++++++.+|.++. ... .|+|++.
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga-~~-V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~D 616 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGA-RS-TTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFID 616 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTC-SE-EEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEEC
T ss_pred CCCcEEEeeechhHHHHHHHHCCC-CE-EEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEEC
Confidence 457999999999999999987543 35 999998 6677776542 4799999999874 223 4999974
Q ss_pred hhh--------hcCC-hhHHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 227 WVL--------ATWT-DDECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 227 ~vl--------h~~~-d~~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
-.. +.+. .....++++++.+.|+|||.|++....
T Consensus 617 PP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 617 PPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 321 1111 135678999999999999999866544
No 265
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.96 E-value=5.4e-06 Score=81.97 Aligned_cols=126 Identities=13% Similarity=0.030 Sum_probs=80.2
Q ss_pred hhhhhhcCchHHHHHHHHhhcCCcccHHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhc-------------CCCceE
Q 021707 122 AYSYYGKMPEMNGLMRRAISGVSVPFMTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKH-------------HFICEG 188 (309)
Q Consensus 122 ~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-------------p~~~~~ 188 (309)
.|+.+++++.....|.+++.. .+.+..++-.+...|+|||||+|-++...+++. ...+ +
T Consensus 378 tYe~fekD~vRy~~Y~~AI~~-------al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~k-V 449 (745)
T 3ua3_A 378 VYNTFEQDQIKYDVYGEAVVG-------ALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVK-L 449 (745)
T ss_dssp HHHHHHHCHHHHHHHHHHHHH-------HHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEE-E
T ss_pred HHHHHcCChhhHHHHHHHHHH-------HHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccE-E
Confidence 577788888888888888753 222222111235689999999999975433222 1235 8
Q ss_pred EEeechh-HHhhCC-----C-CCCceEEeCCCCCC-C------CC-CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcE
Q 021707 189 INFDLPE-VVGEAP-----S-IPGVTHIGGDMFNS-I------PA-ANAIFMKWVLATWTDDECKLIMENCYKALLAGGK 253 (309)
Q Consensus 189 ~~~D~p~-~~~~a~-----~-~~ri~~~~~d~~~~-~------p~-~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~ 253 (309)
+++|... .+...+ . .++|+++.+|+.+- . |+ +|+|+.=+.=.....+-...+|..+.+-|+|||.
T Consensus 450 yAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi 529 (745)
T 3ua3_A 450 YIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTI 529 (745)
T ss_dssp EEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCE
T ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcE
Confidence 9999843 222211 1 27899999999764 5 44 6999854332112333355678888899999996
Q ss_pred EE
Q 021707 254 LI 255 (309)
Q Consensus 254 l~ 255 (309)
++
T Consensus 530 ~i 531 (745)
T 3ua3_A 530 SI 531 (745)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 266
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.95 E-value=4.9e-06 Score=73.30 Aligned_cols=65 Identities=12% Similarity=0.169 Sum_probs=52.7
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC----CCCceEEeCCCCCC
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS----IPGVTHIGGDMFNS 216 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~----~~ri~~~~~d~~~~ 216 (309)
...+++..+ .....+|||||||+|.++..++++. .+ ++++|. +.+++.+++ .++++++.+|+.+.
T Consensus 18 ~~~iv~~~~-~~~~~~VLEIG~G~G~lt~~La~~~--~~-V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~ 87 (255)
T 3tqs_A 18 LQKIVSAIH-PQKTDTLVEIGPGRGALTDYLLTEC--DN-LALVEIDRDLVAFLQKKYNQQKNITIYQNDALQF 87 (255)
T ss_dssp HHHHHHHHC-CCTTCEEEEECCTTTTTHHHHTTTS--SE-EEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTC
T ss_pred HHHHHHhcC-CCCcCEEEEEcccccHHHHHHHHhC--CE-EEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhC
Confidence 455666665 6667899999999999999999885 56 999998 677776654 37899999999874
No 267
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.88 E-value=1.2e-05 Score=72.57 Aligned_cols=77 Identities=19% Similarity=0.185 Sum_probs=60.1
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-----CCceEEeCCCCCC---C-
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-----PGVTHIGGDMFNS---I- 217 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-----~ri~~~~~d~~~~---~- 217 (309)
...+++.+. .....+|||+|||+|.++..+++.+|+.+ ++++|. +.+++.++++ ++++++.+|+.+. +
T Consensus 15 l~e~l~~L~-~~~g~~vLD~g~G~G~~s~~la~~~~~~~-VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~ 92 (301)
T 1m6y_A 15 VREVIEFLK-PEDEKIILDCTVGEGGHSRAILEHCPGCR-IIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLK 92 (301)
T ss_dssp HHHHHHHHC-CCTTCEEEETTCTTSHHHHHHHHHCTTCE-EEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHH
T ss_pred HHHHHHhcC-CCCCCEEEEEeCCcCHHHHHHHHHCCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHH
Confidence 455666664 56678999999999999999999999888 999998 7777776542 6899999998642 1
Q ss_pred ----CCCceeeeh
Q 021707 218 ----PAANAIFMK 226 (309)
Q Consensus 218 ----p~~D~i~~~ 226 (309)
...|.|++.
T Consensus 93 ~~g~~~~D~Vl~D 105 (301)
T 1m6y_A 93 TLGIEKVDGILMD 105 (301)
T ss_dssp HTTCSCEEEEEEE
T ss_pred hcCCCCCCEEEEc
Confidence 224888763
No 268
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.82 E-value=3.2e-05 Score=77.64 Aligned_cols=109 Identities=11% Similarity=-0.005 Sum_probs=75.7
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhc------------------------------------------CCC
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKH------------------------------------------HFI 185 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~------------------------------------------p~~ 185 (309)
+..++.... |....+|+|.+||+|.++++.+... ++.
T Consensus 179 Aa~ll~~~~-~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~ 257 (703)
T 3v97_A 179 AAAIVMRSG-WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSS 257 (703)
T ss_dssp HHHHHHHTT-CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHhhC-CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCc
Confidence 344555554 8778899999999999999888652 346
Q ss_pred ceEEEeec-hhHHhhCCCC-------CCceEEeCCCCCC-CC----CCceeeehhhhhc-C-ChhHHHHHHHHHHHhc--
Q 021707 186 CEGINFDL-PEVVGEAPSI-------PGVTHIGGDMFNS-IP----AANAIFMKWVLAT-W-TDDECKLIMENCYKAL-- 248 (309)
Q Consensus 186 ~~~~~~D~-p~~~~~a~~~-------~ri~~~~~d~~~~-~p----~~D~i~~~~vlh~-~-~d~~~~~iL~~~~~aL-- 248 (309)
+ ++++|. +.+++.++.+ ++|++..+|+.+. .| ..|+|+++--... + .+++...+.+.+.+.|
T Consensus 258 ~-i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~ 336 (703)
T 3v97_A 258 H-FYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKN 336 (703)
T ss_dssp C-EEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHH
T ss_pred c-EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHh
Confidence 7 999998 7788777653 4699999999764 23 2499988733221 1 2334455555555444
Q ss_pred -CCCcEEEEec
Q 021707 249 -LAGGKLIACE 258 (309)
Q Consensus 249 -~pgG~l~i~e 258 (309)
.|||+++|+-
T Consensus 337 ~~~g~~~~ilt 347 (703)
T 3v97_A 337 QFGGWNLSLFS 347 (703)
T ss_dssp HCTTCEEEEEE
T ss_pred hCCCCeEEEEe
Confidence 5899999884
No 269
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.79 E-value=4.6e-05 Score=70.79 Aligned_cols=103 Identities=13% Similarity=0.130 Sum_probs=70.3
Q ss_pred cceEEEecCCccHHHHHHHHh-----------------cCCCceEEEeech------------hHHhhC----CCCCCce
Q 021707 161 VKRLVDVGGSAGDCLRMILQK-----------------HHFICEGINFDLP------------EVVGEA----PSIPGVT 207 (309)
Q Consensus 161 ~~~vlDvG~G~G~~~~~l~~~-----------------~p~~~~~~~~D~p------------~~~~~a----~~~~ri~ 207 (309)
.-+|+|+||++|..+..++.. .|+++ ++.-|+| ...+.. ....+-.
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~-v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~ 131 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQ-IFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSC 131 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEE-EEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceE-EEecCCCccchHHHHhhhhhhHhhhhhhccCCCCce
Confidence 678999999999998887776 47778 8999986 111111 1112223
Q ss_pred E---EeCCCCCC-CCCC--ceeeehhhhhcCChh-------------------------HHH------------HHHHHH
Q 021707 208 H---IGGDMFNS-IPAA--NAIFMKWVLATWTDD-------------------------ECK------------LIMENC 244 (309)
Q Consensus 208 ~---~~~d~~~~-~p~~--D~i~~~~vlh~~~d~-------------------------~~~------------~iL~~~ 244 (309)
| ++|.|+.. +|.. |+++.+.+||-.++. .+. .+|+..
T Consensus 132 f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 132 LIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 45677765 7763 999999999964421 122 238888
Q ss_pred HHhcCCCcEEEEeccccCCC
Q 021707 245 YKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 245 ~~aL~pgG~l~i~e~~~~~~ 264 (309)
++.|+|||++++.=.-.+..
T Consensus 212 a~eL~pGG~mvl~~~gr~~~ 231 (384)
T 2efj_A 212 SEELISRGRMLLTFICKEDE 231 (384)
T ss_dssp HHHEEEEEEEEEEEECCCTT
T ss_pred HHHhccCCeEEEEEecCCCc
Confidence 99999999999886655543
No 270
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.77 E-value=2.8e-05 Score=68.52 Aligned_cols=99 Identities=8% Similarity=0.115 Sum_probs=66.6
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-h-------hHHhhCCCC-------CCceEEeCCCCCC---CC-
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-P-------EVVGEAPSI-------PGVTHIGGDMFNS---IP- 218 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p-------~~~~~a~~~-------~ri~~~~~d~~~~---~p- 218 (309)
.....+|||+|||+|.++..+++. ..+ ++++|. | .+++.++++ .|++++.+|..+. ++
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~--g~~-V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~ 157 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASL--GLT-VTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVK 157 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHT--TCC-EEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHh--CCE-EEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhc
Confidence 344579999999999999999986 467 999998 6 666666543 5699999998763 32
Q ss_pred --C-CceeeehhhhhcCC------------------hhHHHHHHHHHHHhcCCCcEEEEecccc
Q 021707 219 --A-ANAIFMKWVLATWT------------------DDECKLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 219 --~-~D~i~~~~vlh~~~------------------d~~~~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
. .|+|++.-..++-. +.+...+++.+.+..+ .+++|..+..
T Consensus 158 ~~~~fD~V~~dP~~~~~~~sa~vkk~~~~l~~l~~~~~d~~~ll~~a~~~~~--~~vvvk~p~~ 219 (258)
T 2r6z_A 158 TQGKPDIVYLDPMYPERRKSAAVKKEMAYFHRLVGEAQDEVVLLHTARQTAK--KRVVVKRPRL 219 (258)
T ss_dssp HHCCCSEEEECCCC-------------HHHHHHHSHHHHHHHHHHHHHHHCS--SEEEEEEETT
T ss_pred cCCCccEEEECCCCCCcccchHHHHHHHHhhhhcCCCccHHHHHHHHHHhcC--cEEEEEcCCC
Confidence 3 59999854333211 1234556666666653 3666665544
No 271
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.75 E-value=5.5e-06 Score=76.81 Aligned_cols=88 Identities=11% Similarity=0.007 Sum_probs=62.6
Q ss_pred cceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCCC---C------------
Q 021707 161 VKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNSI---P------------ 218 (309)
Q Consensus 161 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~~---p------------ 218 (309)
..+|+|+|||+|.++..+++.. .+ ++++|. +.+++.++++ ++++++.+|..+.. +
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~--~~-V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~ 290 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNF--DR-VLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGID 290 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGS--SE-EEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSC
T ss_pred CCEEEEccCCCCHHHHHHHhcC--CE-EEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccc
Confidence 3679999999999999988754 35 999998 6777776542 68999999986531 1
Q ss_pred ----CCceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecc
Q 021707 219 ----AANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 219 ----~~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
..|+|++.- |.. .+.+++.+.|+|+|+++.+..
T Consensus 291 ~~~~~fD~Vv~dP-----Pr~---g~~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 291 LKSYQCETIFVDP-----PRS---GLDSETEKMVQAYPRILYISC 327 (369)
T ss_dssp GGGCCEEEEEECC-----CTT---CCCHHHHHHHTTSSEEEEEES
T ss_pred cccCCCCEEEECc-----Ccc---ccHHHHHHHHhCCCEEEEEEC
Confidence 248887632 211 234455666778899888754
No 272
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.71 E-value=6.9e-05 Score=68.48 Aligned_cols=103 Identities=15% Similarity=0.184 Sum_probs=85.4
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCC---------------------------CCCceEEeCC
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPS---------------------------IPGVTHIGGD 212 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~---------------------------~~ri~~~~~d 212 (309)
+...||.+|||.......+...+|+++ ++-+|+|.+++..++ .+++++++.|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~-~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLA-YVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEE-EEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCE-EEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 457899999999999999999888888 899999988765432 1689999999
Q ss_pred CCCC-C--------C--CC-ceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 213 MFNS-I--------P--AA-NAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 213 ~~~~-~--------p--~~-D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
+.+. + + .. .++++-.+|++++++++.++|+.+.+.. |+|.+++.|.+.+.+
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~ 238 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQ 238 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCS
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCC
Confidence 9873 2 1 22 5777889999999999999999999987 788899999988743
No 273
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.69 E-value=7.5e-05 Score=68.79 Aligned_cols=105 Identities=15% Similarity=0.265 Sum_probs=71.9
Q ss_pred CCcceEEEecCCccHHHHHHHHh----------------cCCCceEEEeechh-----HHhhCCC---CCC---ceEEeC
Q 021707 159 KGVKRLVDVGGSAGDCLRMILQK----------------HHFICEGINFDLPE-----VVGEAPS---IPG---VTHIGG 211 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~~~----------------~p~~~~~~~~D~p~-----~~~~a~~---~~r---i~~~~~ 211 (309)
++.-+|+|+||++|..+..+... .|..+ ++.-|+|. +...... ..+ +.-++|
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~-v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpg 128 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQ-IFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPG 128 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEE-EEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEES
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceE-EEecCCCchHHHHHHHhcchhcccCCCEEEEecch
Confidence 44578999999999766544433 46677 89999852 2222221 112 344567
Q ss_pred CCCCC-CCCC--ceeeehhhhhcCCh-------------------------------hHHHHHHHHHHHhcCCCcEEEEe
Q 021707 212 DMFNS-IPAA--NAIFMKWVLATWTD-------------------------------DECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 212 d~~~~-~p~~--D~i~~~~vlh~~~d-------------------------------~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
.|+.. +|.. |+++.++.||-.++ .|-..+|+..++.|+|||++++.
T Consensus 129 SFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~ 208 (359)
T 1m6e_X 129 SFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLT 208 (359)
T ss_dssp CSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEE
T ss_pred hhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 88765 7763 99999999996442 13345699999999999999887
Q ss_pred ccccCCC
Q 021707 258 EPVLLDD 264 (309)
Q Consensus 258 e~~~~~~ 264 (309)
=.-.+..
T Consensus 209 ~~gr~~~ 215 (359)
T 1m6e_X 209 ILGRRSE 215 (359)
T ss_dssp EEECSSS
T ss_pred EecCCCC
Confidence 6655543
No 274
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.68 E-value=7.8e-05 Score=65.72 Aligned_cols=102 Identities=12% Similarity=0.111 Sum_probs=62.5
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhh-CCCC----CCceEEeCCCC-CCCCC--Cceeeehhhh
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGE-APSI----PGVTHIGGDMF-NSIPA--ANAIFMKWVL 229 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~-a~~~----~ri~~~~~d~~-~~~p~--~D~i~~~~vl 229 (309)
+....+|||+|||.|.++..+++..+-.. ++++|+-.-+.. .... .++.....++. ..++. +|+|++....
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~~~~-v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~ap 150 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKEVSG-VKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIGE 150 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTTEEE-EEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCc-ceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCcc
Confidence 56677999999999999998887765444 555665211111 1111 14444444431 12332 4999986654
Q ss_pred h---cCChh-HHHHHHHHHHHhcCCC-cEEEEecccc
Q 021707 230 A---TWTDD-ECKLIMENCYKALLAG-GKLIACEPVL 261 (309)
Q Consensus 230 h---~~~d~-~~~~iL~~~~~aL~pg-G~l~i~e~~~ 261 (309)
+ .+-|. ....+|+-+.+.|+|| |.+++ ..+.
T Consensus 151 nsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~-KVf~ 186 (277)
T 3evf_A 151 SSSSSVTEGERTVRVLDTVEKWLACGVDNFCV-KVLA 186 (277)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE-EESC
T ss_pred CcCchHHHHHHHHHHHHHHHHHhCCCCCeEEE-EecC
Confidence 4 12222 3345789999999999 98887 4444
No 275
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.66 E-value=3.6e-05 Score=71.59 Aligned_cols=91 Identities=9% Similarity=-0.118 Sum_probs=68.7
Q ss_pred cceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC---------------------CCceEEeCCCCCC--
Q 021707 161 VKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI---------------------PGVTHIGGDMFNS-- 216 (309)
Q Consensus 161 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~---------------------~ri~~~~~d~~~~-- 216 (309)
..+|||+|||+|..++.++++.+..+ ++++|. +..++.++++ .+++++.+|..+.
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~-V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEE-VWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSE-EEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCe-EEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 56899999999999999999988888 999998 5565554431 2388999998654
Q ss_pred -CCC-CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEec
Q 021707 217 -IPA-ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 217 -~p~-~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e 258 (309)
.+. .|+|++.- +.. ...+|..+.+.|+|||.+++.-
T Consensus 127 ~~~~~fD~I~lDP----~~~--~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDP----FGS--PMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECC----SSC--CHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCC----CCC--HHHHHHHHHHhcCCCCEEEEEe
Confidence 233 59988531 111 2478999999999999887763
No 276
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.62 E-value=0.00012 Score=66.25 Aligned_cols=104 Identities=9% Similarity=0.011 Sum_probs=68.2
Q ss_pred hhcCCCCCcceEEEecCCccHHHHHHHHhc-CCCceEEEeec-hhHHhhCCCC------CCceEEeCCCCCCCC------
Q 021707 153 DSYNGFKGVKRLVDVGGSAGDCLRMILQKH-HFICEGINFDL-PEVVGEAPSI------PGVTHIGGDMFNSIP------ 218 (309)
Q Consensus 153 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~~D~-p~~~~~a~~~------~ri~~~~~d~~~~~p------ 218 (309)
..++ ...+.+|||+|||+|..+..+++.. +..+ ++++|. +..++.++++ .+++++.+|+.+..+
T Consensus 96 ~~l~-~~~g~~VLDlcaG~G~kt~~la~~~~~~g~-V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~ 173 (309)
T 2b9e_A 96 MLLD-PPPGSHVIDACAAPGNKTSHLAALLKNQGK-IFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYH 173 (309)
T ss_dssp HHHC-CCTTCEEEESSCTTCHHHHHHHHHHTTCSE-EEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGT
T ss_pred HHhC-CCCCCEEEEeCCChhHHHHHHHHHhCCCCE-EEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccC
Confidence 3443 5566799999999999999999986 4567 999998 6666655432 679999999865421
Q ss_pred CCceeeeh------hhhhc---------CChhH-------HHHHHHHHHHhcCCCcEEEEecc
Q 021707 219 AANAIFMK------WVLAT---------WTDDE-------CKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 219 ~~D~i~~~------~vlh~---------~~d~~-------~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
..|.|++- .++.. |+.++ ..++|+++.+.++ ||+|+....
T Consensus 174 ~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTC 235 (309)
T 2b9e_A 174 EVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTC 235 (309)
T ss_dssp TEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEES
T ss_pred CCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECC
Confidence 24888861 12211 12111 2357888777776 887766543
No 277
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.56 E-value=1.7e-05 Score=74.06 Aligned_cols=93 Identities=10% Similarity=-0.005 Sum_probs=69.5
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-------CC-ceEEeCCCCCCC----CC-Cceeee
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-------PG-VTHIGGDMFNSI----PA-ANAIFM 225 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-------~r-i~~~~~d~~~~~----p~-~D~i~~ 225 (309)
.+.+|||++||+|.+++.++++.++...++++|. +..++.++++ ++ ++++.+|.++.. +. .|+|++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 4579999999999999999998766333999998 6667666542 34 999999986432 23 499987
Q ss_pred hhhhhcCChhHHHHHHHHHHHhcCCCcEEEEec
Q 021707 226 KWVLATWTDDECKLIMENCYKALLAGGKLIACE 258 (309)
Q Consensus 226 ~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e 258 (309)
-- +.. ...++..+.+.|+|||.|++.-
T Consensus 132 DP----~g~--~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 132 DP----FGT--PVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CC----SSC--CHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC----CcC--HHHHHHHHHHHhCCCCEEEEEe
Confidence 54 111 1358899999999999887765
No 278
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.51 E-value=7e-05 Score=72.89 Aligned_cols=110 Identities=15% Similarity=0.163 Sum_probs=75.2
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcC------------------CCceEEEeec-hhHHhhCCC------
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHH------------------FICEGINFDL-PEVVGEAPS------ 202 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p------------------~~~~~~~~D~-p~~~~~a~~------ 202 (309)
+..+++.++ .....+|+|.+||+|.++..+.+... ..+ ++++|+ +.+++.++.
T Consensus 158 v~~mv~~l~-p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~-i~GiEid~~~~~lA~~nl~l~g 235 (541)
T 2ar0_A 158 IKTIIHLLK-PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRA-FIGLELVPGTRRLALMNCLLHD 235 (541)
T ss_dssp HHHHHHHHC-CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTS-EEEEESCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHhc-cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcce-EEEEcCCHHHHHHHHHHHHHhC
Confidence 334455554 44567999999999999998887532 236 999998 556655542
Q ss_pred CCC-----ceEEeCCCCCC----CCCCceeeehhhhhcCC------------hhHHHHHHHHHHHhcCCCcEEEEecc
Q 021707 203 IPG-----VTHIGGDMFNS----IPAANAIFMKWVLATWT------------DDECKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 203 ~~r-----i~~~~~d~~~~----~p~~D~i~~~~vlh~~~------------d~~~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
... +.+..+|.+.. .+..|+|+++-.+.... .......++.+.+.|+|||++.++-+
T Consensus 236 i~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 236 IEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp CCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 132 78999999864 12359999864433211 11224789999999999999887743
No 279
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.31 E-value=0.00038 Score=55.53 Aligned_cols=85 Identities=18% Similarity=0.087 Sum_probs=59.7
Q ss_pred CCcceEEEecCCcc-HHHHHHHHhcCCCceEEEeec-hhHHhhCCCCCCceEEeCCCCCCCC----CCceeeehhhhhcC
Q 021707 159 KGVKRLVDVGGSAG-DCLRMILQKHHFICEGINFDL-PEVVGEAPSIPGVTHIGGDMFNSIP----AANAIFMKWVLATW 232 (309)
Q Consensus 159 ~~~~~vlDvG~G~G-~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~~ri~~~~~d~~~~~p----~~D~i~~~~vlh~~ 232 (309)
....+|||||||.| ..+..|++. .+.. +++.|+ |..++ ++..|+|++.. .+|+|+..+
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~-~g~~-V~atDInp~Av~---------~v~dDiF~P~~~~Y~~~DLIYsir----- 97 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKH-SKVD-LVLTDIKPSHGG---------IVRDDITSPRMEIYRGAALIYSIR----- 97 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHH-SCCE-EEEECSSCSSTT---------EECCCSSSCCHHHHTTEEEEEEES-----
T ss_pred CCCCcEEEEccCCChHHHHHHHHh-CCCe-EEEEECCccccc---------eEEccCCCCcccccCCcCEEEEcC-----
Confidence 34579999999999 588777764 3677 999998 44333 89999999844 459998777
Q ss_pred ChhHHHHHHHHHHHhcCCCcEEEEecccc
Q 021707 233 TDDECKLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 233 ~d~~~~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
|+.|...-+.++++... .-++|.-..-
T Consensus 98 PP~El~~~i~~lA~~v~--adliI~pL~~ 124 (153)
T 2k4m_A 98 PPAEIHSSLMRVADAVG--ARLIIKPLTG 124 (153)
T ss_dssp CCTTTHHHHHHHHHHHT--CEEEEECBTT
T ss_pred CCHHHHHHHHHHHHHcC--CCEEEEcCCC
Confidence 44555566666666654 5677664433
No 280
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.28 E-value=0.0001 Score=64.90 Aligned_cols=97 Identities=18% Similarity=0.165 Sum_probs=63.3
Q ss_pred CcceEEEecCCccHHHHHHHHh-------cCC-----CceEEEeec-h---hHHhh-----------CC-----------
Q 021707 160 GVKRLVDVGGSAGDCLRMILQK-------HHF-----ICEGINFDL-P---EVVGE-----------AP----------- 201 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~-------~p~-----~~~~~~~D~-p---~~~~~-----------a~----------- 201 (309)
+..+|||||+|+|..+..+++. +|+ ++ ++.+|. | +.+.. ++
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~-~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLH-FISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEE-EEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeE-EEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 4579999999999999887765 674 46 899986 3 22221 11
Q ss_pred ---------CCCCceEEeCCCCCC---CC-----CCceeeeh-hhhhcCChhHHHHHHHHHHHhcCCCcEEEEe
Q 021707 202 ---------SIPGVTHIGGDMFNS---IP-----AANAIFMK-WVLATWTDDECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 202 ---------~~~ri~~~~~d~~~~---~p-----~~D~i~~~-~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
...+++++.||..+. .+ ..|+|++- +.-..-|+--..++|+.+++.|+|||+|+..
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~ty 212 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATF 212 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEES
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEE
Confidence 114577889998653 32 24888873 2211111100247899999999999998863
No 281
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.26 E-value=0.00097 Score=61.37 Aligned_cols=99 Identities=12% Similarity=0.087 Sum_probs=71.4
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCCCCCceEEeCCCCCCCCC---CceeeehhhhhcCCh
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPSIPGVTHIGGDMFNSIPA---ANAIFMKWVLATWTD 234 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~~~ri~~~~~d~~~~~p~---~D~i~~~~vlh~~~d 234 (309)
+..+.++||+||+.|.++..++++ +.+ ++++|.-.+-......++|+++.+|.++..|. .|+|++-.+. +.
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r--g~~-V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~---~p 282 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR--NMW-VYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVE---KP 282 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT--TCE-EEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEECCSS---CH
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC--CCE-EEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEEEEcCCC---Ch
Confidence 346789999999999999999988 567 99999854444444568999999999987443 3888876554 34
Q ss_pred hHHHHHHHHHHHhcCCCcEEEEeccccC
Q 021707 235 DECKLIMENCYKALLAGGKLIACEPVLL 262 (309)
Q Consensus 235 ~~~~~iL~~~~~aL~pgG~l~i~e~~~~ 262 (309)
.....++.+.......++.++.+...+.
T Consensus 283 ~~~~~l~~~wl~~~~~~~aI~~lKL~mk 310 (375)
T 4auk_A 283 AKVAALMAQWLVNGWCRETIFNLKLPMK 310 (375)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEECCSS
T ss_pred HHhHHHHHHHHhccccceEEEEEEeccc
Confidence 4555666665555555566666665443
No 282
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.20 E-value=0.00076 Score=67.85 Aligned_cols=101 Identities=14% Similarity=0.041 Sum_probs=66.7
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCC---CceEEEeec-hhHHhhC--C----C------CCCceEEeCCCCCCC----
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHF---ICEGINFDL-PEVVGEA--P----S------IPGVTHIGGDMFNSI---- 217 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~---~~~~~~~D~-p~~~~~a--~----~------~~ri~~~~~d~~~~~---- 217 (309)
+....+|+|.|||+|.++.++++..+. .+ ++++|+ +.+++.+ + . .+...+...|++.+.
T Consensus 319 l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~-IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~ 397 (878)
T 3s1s_A 319 LTEDEVISDPAAGSGNLLATVSAGFNNVMPRQ-IWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDF 397 (878)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHTSTTCCGGG-EEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGG
T ss_pred CCCCCEEEECCCCccHHHHHHHHHhcccCCCe-EEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhccccccc
Confidence 345679999999999999999998863 46 899998 5555444 1 1 123456666776531
Q ss_pred CCCceeeehhhhh-cCC-hh-------------------------HHHHHHHHHHHhcCCCcEEEEecc
Q 021707 218 PAANAIFMKWVLA-TWT-DD-------------------------ECKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 218 p~~D~i~~~~vlh-~~~-d~-------------------------~~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
...|+|+++--.- .+. +. -...+++.+.+.|+|||++.++=+
T Consensus 398 ~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP 466 (878)
T 3s1s_A 398 ANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMP 466 (878)
T ss_dssp TTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEC
Confidence 2249998753321 111 11 123478889999999999887643
No 283
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.18 E-value=0.00027 Score=62.35 Aligned_cols=106 Identities=11% Similarity=0.022 Sum_probs=65.6
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeechh-HHhhCCC----CCC-ceEEeC-CCCCCCCC-C
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPE-VVGEAPS----IPG-VTHIGG-DMFNSIPA-A 220 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~-~~~~a~~----~~r-i~~~~~-d~~~~~p~-~ 220 (309)
..+.+.+ .+....+|||+|||.|.++..+++..+-.. ++++|+-. ....+.. ..+ +.+.+. |+....+. +
T Consensus 80 ~ei~eK~-~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~s-V~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~ 157 (282)
T 3gcz_A 80 RWMEERG-YVKPTGIVVDLGCGRGGWSYYAASLKNVKK-VMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPG 157 (282)
T ss_dssp HHHHHTT-SCCCCEEEEEETCTTCHHHHHHHTSTTEEE-EEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCC
T ss_pred HHHHHhc-CCCCCCEEEEeCCCCCHHHHHHHHhcCCCe-eeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCc
Confidence 3455555 366778999999999999999888776556 78888721 1111111 122 333333 44332233 5
Q ss_pred ceeeehhhhh----cCChhHHHHHHHHHHHhcCCC--cEEEE
Q 021707 221 NAIFMKWVLA----TWTDDECKLIMENCYKALLAG--GKLIA 256 (309)
Q Consensus 221 D~i~~~~vlh----~~~d~~~~~iL~~~~~aL~pg--G~l~i 256 (309)
|+|++-...+ .........+|.-+.+.|+|| |.+++
T Consensus 158 DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~ 199 (282)
T 3gcz_A 158 DTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCI 199 (282)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred CEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEE
Confidence 9999755544 111223345788889999999 98776
No 284
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.08 E-value=0.00022 Score=65.86 Aligned_cols=96 Identities=15% Similarity=0.113 Sum_probs=68.1
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC--------------CCCceEEeCCCCCCC-------
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS--------------IPGVTHIGGDMFNSI------- 217 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~--------------~~ri~~~~~d~~~~~------- 217 (309)
.+.+||=||+|.|..+.++++. |..+ ++++|+ |.|++.+++ .+|++++.+|.++.+
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~~~~-V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-KPKM-VTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-CCSE-EEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcHHHHHHHHhc-CCce-eEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 3579999999999999999975 5566 999999 777776543 157899999986532
Q ss_pred CCCceeeehhhhh-------cCCh-hHHHHHHHHHHHhcCCCcEEEEe
Q 021707 218 PAANAIFMKWVLA-------TWTD-DECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 218 p~~D~i~~~~vlh-------~~~d-~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
...|+|+.=-.-. .... .=..+.++.++++|+|||.++..
T Consensus 283 ~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 283 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 1248888531100 0011 11357889999999999988764
No 285
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.03 E-value=0.00033 Score=61.61 Aligned_cols=78 Identities=12% Similarity=0.139 Sum_probs=54.2
Q ss_pred HHHhhcCCCCCc--ceEEEecCCccHHHHHHHHhcCCCceEEEeechh-H-------HhhCCC-------C-CCceEEeC
Q 021707 150 SVLDSYNGFKGV--KRLVDVGGSAGDCLRMILQKHHFICEGINFDLPE-V-------VGEAPS-------I-PGVTHIGG 211 (309)
Q Consensus 150 ~~~~~~~~~~~~--~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~-~-------~~~a~~-------~-~ri~~~~~ 211 (309)
.+.+.+. ..+. .+|||+|||+|..+..+++. ..+ ++++|... + ++.++. . .|++++.+
T Consensus 77 ~l~~al~-l~~g~~~~VLDl~~G~G~dal~lA~~--g~~-V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~ 152 (258)
T 2oyr_A 77 AVAKAVG-IKGDYLPDVVDATAGLGRDAFVLASV--GCR-VRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHA 152 (258)
T ss_dssp HHHHHTT-CBTTBCCCEEETTCTTCHHHHHHHHH--TCC-EEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEES
T ss_pred HHHHHhc-ccCCCCCEEEEcCCcCCHHHHHHHHc--CCE-EEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEEC
Confidence 3445553 4455 79999999999999999998 457 99999843 2 332221 1 47999999
Q ss_pred CCCCC---CCC-Cceeeehhhhhc
Q 021707 212 DMFNS---IPA-ANAIFMKWVLAT 231 (309)
Q Consensus 212 d~~~~---~p~-~D~i~~~~vlh~ 231 (309)
|..+. ++. .|+|++.-..+.
T Consensus 153 D~~~~L~~~~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 153 SSLTALTDITPRPQVVYLDPMFPH 176 (258)
T ss_dssp CHHHHSTTCSSCCSEEEECCCCCC
T ss_pred CHHHHHHhCcccCCEEEEcCCCCC
Confidence 98653 333 599998654443
No 286
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.01 E-value=0.00026 Score=68.85 Aligned_cols=108 Identities=14% Similarity=0.051 Sum_probs=70.4
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcC---------------CCceEEEeec-hhHHhhCCCC-------C
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHH---------------FICEGINFDL-PEVVGEAPSI-------P 204 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p---------------~~~~~~~~D~-p~~~~~a~~~-------~ 204 (309)
+..+++.+. . ...+|+|.+||+|.++.++.+..+ ..+ +.++|+ +.++..++.+ .
T Consensus 234 v~lmv~ll~-p-~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~-i~G~Eid~~~~~lA~~Nl~l~gi~~ 310 (544)
T 3khk_A 234 VTLIVEMLE-P-YKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQIS-VYGQESNPTTWKLAAMNMVIRGIDF 310 (544)
T ss_dssp HHHHHHHHC-C-CSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEE-EEECCCCHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHh-c-CCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhce-EEEEeCCHHHHHHHHHHHHHhCCCc
Confidence 344455553 2 234999999999999998865432 456 899998 5566555431 3
Q ss_pred CceEEeCCCCCC--CCC--Cceeeehhhhh--cCChh-------------------------HHHHHHHHHHHhcCCCcE
Q 021707 205 GVTHIGGDMFNS--IPA--ANAIFMKWVLA--TWTDD-------------------------ECKLIMENCYKALLAGGK 253 (309)
Q Consensus 205 ri~~~~~d~~~~--~p~--~D~i~~~~vlh--~~~d~-------------------------~~~~iL~~~~~aL~pgG~ 253 (309)
++.+..+|.+.. .+. .|+|+++--.. .|..+ .....++.+.+.|+|||+
T Consensus 311 ~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr 390 (544)
T 3khk_A 311 NFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGS 390 (544)
T ss_dssp BCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEE
T ss_pred ccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCce
Confidence 455588898764 222 49999853322 23211 112588999999999999
Q ss_pred EEEec
Q 021707 254 LIACE 258 (309)
Q Consensus 254 l~i~e 258 (309)
+.++=
T Consensus 391 ~aiVl 395 (544)
T 3khk_A 391 MALLL 395 (544)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 87663
No 287
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.00 E-value=0.0019 Score=57.36 Aligned_cols=99 Identities=10% Similarity=0.055 Sum_probs=62.3
Q ss_pred CCCcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHH-hhCC--C--C-CCceEEeC-CCCCCCCC-Cceeeehhhh
Q 021707 158 FKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVV-GEAP--S--I-PGVTHIGG-DMFNSIPA-ANAIFMKWVL 229 (309)
Q Consensus 158 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~-~~a~--~--~-~ri~~~~~-d~~~~~p~-~D~i~~~~vl 229 (309)
+.+..+|||+||+.|.++..+++..+-.. ++++|+.... .... + . +-+.+.++ |++...+. .|+|++-...
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~s-V~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~AP 157 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMS-VKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIGE 157 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEE-EEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCce-eeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEEeecCcC
Confidence 56678999999999999999998765555 7788873211 1110 0 1 22334433 55443333 4999875443
Q ss_pred h----cCChhHHHHHHHHHHHhcCCC-cEEEEe
Q 021707 230 A----TWTDDECKLIMENCYKALLAG-GKLIAC 257 (309)
Q Consensus 230 h----~~~d~~~~~iL~~~~~aL~pg-G~l~i~ 257 (309)
+ .........+|.-+.+.|+|| |.+++-
T Consensus 158 nsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 158 SSSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 3 111112356788889999999 988774
No 288
>1xmk_A Double-stranded RNA-specific adenosine deaminase; winged helix-turn-helix, RNA editing, interferon, ADAR1, hydrolase; 0.97A {Homo sapiens} SCOP: a.4.5.19
Probab=96.96 E-value=0.0004 Score=49.50 Aligned_cols=64 Identities=13% Similarity=0.109 Sum_probs=52.8
Q ss_pred chhhhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcc-hHHHHHHHHHcCCceeeecccccCceEEcChhchh
Q 021707 4 NECRDGRKKVRLANTPLSVSQILTCILPSGGGDAE-NLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKS 73 (309)
Q Consensus 4 ~~~~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~-~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~ 73 (309)
.....-+...+...||.|+.+||+.+ |++.. .+++.|..|...|+|...+.+ .-.|++|+.+..
T Consensus 10 ~~~~~~IL~~Lk~~g~~ta~eiA~~L----git~~~aVr~hL~~Le~eGlV~~~~~g--RP~w~LT~~g~~ 74 (79)
T 1xmk_A 10 AEIKEKICDYLFNVSDSSALNLAKNI----GLTKARDINAVLIDMERQGDVYRQGTT--PPIWHLTDKKRE 74 (79)
T ss_dssp HHHHHHHHHHHHHTCCEEHHHHHHHH----CGGGHHHHHHHHHHHHHTTSEEEECSS--SCEEEECHHHHT
T ss_pred hhHHHHHHHHHHHcCCcCHHHHHHHc----CCCcHHHHHHHHHHHHHCCCEEecCCC--CCCeEeCHhHHh
Confidence 34455667777788999999999999 99998 999999999999999876533 238999998753
No 289
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=96.91 E-value=0.00029 Score=66.03 Aligned_cols=63 Identities=22% Similarity=0.312 Sum_probs=50.0
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC--------CCceEEeCCCCCCCC-----CCceeee
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI--------PGVTHIGGDMFNSIP-----AANAIFM 225 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~--------~ri~~~~~d~~~~~p-----~~D~i~~ 225 (309)
.+.+|||+|||+|..+..+++.. .+ ++++|. +.+++.++.+ ++++++.+|+++.++ ..|+|++
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g--~~-V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKA--SQ-GIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTC--SE-EEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCCEEEEeCCCchHHHHHHHhcC--CE-EEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEE
Confidence 35799999999999999998874 56 999998 6677766532 579999999987422 2599997
No 290
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=96.83 E-value=0.0016 Score=63.35 Aligned_cols=98 Identities=14% Similarity=0.096 Sum_probs=68.6
Q ss_pred CcceEEEecCCccHHHHHHHHhcC---CCceEEEeec-hhHHhhCCCC--------CCceEEeCCCCCC-CC---C--Cc
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHH---FICEGINFDL-PEVVGEAPSI--------PGVTHIGGDMFNS-IP---A--AN 221 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p---~~~~~~~~D~-p~~~~~a~~~--------~ri~~~~~d~~~~-~p---~--~D 221 (309)
...+|+|.+||+|.++..+.+... ..+ +.++|+ +.+...++.+ +++.+..+|.+.. +| . .|
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~-i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD 299 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVV-YFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFD 299 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCE-EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBS
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCce-EEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccccccccccccc
Confidence 457999999999999999988853 556 999998 5555555421 4678999999875 23 2 49
Q ss_pred eeeehhhh-hcCC------------------hh--HHHHHHHHHHHhcC-CCcEEEEec
Q 021707 222 AIFMKWVL-ATWT------------------DD--ECKLIMENCYKALL-AGGKLIACE 258 (309)
Q Consensus 222 ~i~~~~vl-h~~~------------------d~--~~~~iL~~~~~aL~-pgG~l~i~e 258 (309)
+|+++--. ..|. .. .....++.+.+.|+ |||++.++=
T Consensus 300 ~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~Vl 358 (542)
T 3lkd_A 300 GVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVL 358 (542)
T ss_dssp EEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEE
T ss_pred EEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEe
Confidence 99975221 1121 00 01247999999999 999986653
No 291
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=96.72 E-value=0.0018 Score=57.37 Aligned_cols=65 Identities=26% Similarity=0.311 Sum_probs=52.4
Q ss_pred cHHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC--CCCceEEeCCCCC
Q 021707 147 FMTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS--IPGVTHIGGDMFN 215 (309)
Q Consensus 147 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~--~~ri~~~~~d~~~ 215 (309)
..+.+++.+. ......+||++||.|.++..++++ +.+ ++++|. |.+++.+++ .+|++++.+|+.+
T Consensus 10 Ll~e~le~L~-~~~gg~~VD~T~G~GGHS~~il~~--~g~-VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~ 77 (285)
T 1wg8_A 10 LYQEALDLLA-VRPGGVYVDATLGGAGHARGILER--GGR-VIGLDQDPEAVARAKGLHLPGLTVVQGNFRH 77 (285)
T ss_dssp THHHHHHHHT-CCTTCEEEETTCTTSHHHHHHHHT--TCE-EEEEESCHHHHHHHHHTCCTTEEEEESCGGG
T ss_pred HHHHHHHhhC-CCCCCEEEEeCCCCcHHHHHHHHC--CCE-EEEEeCCHHHHHHHHhhccCCEEEEECCcch
Confidence 3567778875 777789999999999999999998 677 999998 666655432 2689999999865
No 292
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.67 E-value=0.0033 Score=56.68 Aligned_cols=101 Identities=13% Similarity=0.106 Sum_probs=76.3
Q ss_pred CcceEEEecCCccHHHHHHHHhcC-CCceEEEeechhHHhhCC---------CCCCceEEeCCCCCCCC----------C
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHH-FICEGINFDLPEVVGEAP---------SIPGVTHIGGDMFNSIP----------A 219 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~~D~p~~~~~a~---------~~~ri~~~~~d~~~~~p----------~ 219 (309)
+...||++|||-=..+..+. .| +++ ++-+|.|.+++..+ ..++.++++.|+.+.+. .
T Consensus 102 g~~QvV~LGaGlDTra~Rl~--~~~~~~-v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLD--WPTGTT-VYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPS 178 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSC--CCTTCE-EEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTT
T ss_pred CCCeEEEeCCCCCchhhhcc--CCCCcE-EEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCC
Confidence 34679999999888877665 24 467 89999998887643 24789999999986411 1
Q ss_pred C-ceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 220 A-NAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 220 ~-D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
. =++++-.++|+++++++.++|+.+.+.+.||+.|+ .|.+.++.
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~-~d~~~~~~ 223 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIA-VETSPLHG 223 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEE-EECCCTTC
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEE-EEecCCCC
Confidence 1 35777899999999999999999999988888655 45555443
No 293
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=96.61 E-value=0.0013 Score=45.22 Aligned_cols=52 Identities=15% Similarity=0.135 Sum_probs=42.9
Q ss_pred hhhhhhcCC-CCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcC
Q 021707 9 GRKKVRLAN-TPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLT 68 (309)
Q Consensus 9 g~~~~~l~~-~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t 68 (309)
-+.+.+-.+ .|+|..|||+.+ |++...+.+.|..|...|+|.... .++|+++
T Consensus 14 ~IL~~L~~~~~~~s~~eLA~~l----glsr~tv~~~l~~L~~~G~I~~~~----~G~y~lg 66 (67)
T 2heo_A 14 KILQVLSDDGGPVAIFQLVKKC----QVPKKTLNQVLYRLKKEDRVSSPS----PKYWSIG 66 (67)
T ss_dssp HHHHHHHHHCSCEEHHHHHHHH----CSCHHHHHHHHHHHHHTTSEEEEE----TTEEEEC
T ss_pred HHHHHHHHcCCCcCHHHHHHHH----CcCHHHHHHHHHHHHHCCcEecCC----CceEeeC
Confidence 345544333 689999999999 999999999999999999997764 6788865
No 294
>1y0u_A Arsenical resistance operon repressor, putative; structural genomics, protein structure initiative, PSI; HET: MSE; 1.60A {Archaeoglobus fulgidus} SCOP: a.4.5.5
Probab=96.35 E-value=0.0042 Score=45.57 Aligned_cols=54 Identities=15% Similarity=0.195 Sum_probs=46.5
Q ss_pred hhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhch
Q 021707 8 DGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGK 72 (309)
Q Consensus 8 ~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~ 72 (309)
..+++.+ +++.|..|||+.+ |++...+.+.|+.|...|++.... +.|++++.+.
T Consensus 34 ~~Il~~L--~~~~~~~eLa~~l----~is~~tv~~~L~~L~~~Glv~~~~-----g~y~l~~~g~ 87 (96)
T 1y0u_A 34 RKILRML--DKGRSEEEIMQTL----SLSKKQLDYHLKVLEAGFCIERVG-----ERWVVTDAGK 87 (96)
T ss_dssp HHHHHHH--HTTCCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEET-----TEEEECTTTC
T ss_pred HHHHHHH--cCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEEEC-----CEEEECCCch
Confidence 3455555 7889999999999 999999999999999999999873 5899998764
No 295
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=96.27 E-value=0.017 Score=48.61 Aligned_cols=92 Identities=4% Similarity=-0.135 Sum_probs=58.4
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC---------CCCceEEeCCCCCC-------------
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS---------IPGVTHIGGDMFNS------------- 216 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~---------~~ri~~~~~d~~~~------------- 216 (309)
+..+||+||+| ..++.+++ .++.+ ++.+|. ++..+.+++ .++|+++.+|..+-
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~-~~~g~-VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~ 105 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAE-LPGKH-VTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWR 105 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHT-STTCE-EEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGG
T ss_pred CCCEEEEECch--HHHHHHHH-cCCCE-EEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhh
Confidence 45799999985 55555555 45677 999997 444444332 45899999996431
Q ss_pred -----------CC--C-CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 217 -----------IP--A-ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 217 -----------~p--~-~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
.+ . .|+|++--- .....+..+.+.|+|||.| |.|.+...
T Consensus 106 ~l~~~~~~i~~~~~~~~fDlIfIDg~-------k~~~~~~~~l~~l~~GG~I-v~DNv~~r 158 (202)
T 3cvo_A 106 SYPDYPLAVWRTEGFRHPDVVLVDGR-------FRVGCALATAFSITRPVTL-LFDDYSQR 158 (202)
T ss_dssp GTTHHHHGGGGCTTCCCCSEEEECSS-------SHHHHHHHHHHHCSSCEEE-EETTGGGC
T ss_pred hHHHHhhhhhccccCCCCCEEEEeCC-------CchhHHHHHHHhcCCCeEE-EEeCCcCC
Confidence 11 2 388886431 1124455567889999977 55554443
No 296
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=96.26 E-value=0.025 Score=51.39 Aligned_cols=103 Identities=15% Similarity=0.174 Sum_probs=79.9
Q ss_pred CcceEEEecCCccHHHHHHHHh-cCCCceEEEeechhHHhhCC-----------------------------CCCCceEE
Q 021707 160 GVKRLVDVGGSAGDCLRMILQK-HHFICEGINFDLPEVVGEAP-----------------------------SIPGVTHI 209 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~~D~p~~~~~a~-----------------------------~~~ri~~~ 209 (309)
+...||-+|||.=.....+... .++++ .+=+|+|++++..+ ..++.+++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~-~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSK-YFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSE-EEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCe-EEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 3568999999999999999875 35777 89999998876432 13688999
Q ss_pred eCCCCCC--C---------C-CC-ceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 210 GGDMFNS--I---------P-AA-NAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 210 ~~d~~~~--~---------p-~~-D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
+.|+.+. + + .. =+++.=.+|.+++++++.++|+.+.+... +|.+++.|.+.+.+
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~-~~~~i~yE~i~p~d 235 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFE-RAMFINYEQVNMGD 235 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCS-SEEEEEEEECCTTS
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCC-CceEEEEeccCCCC
Confidence 9999762 1 1 12 35666789999999999999999998864 56777889986654
No 297
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.18 E-value=0.01 Score=51.03 Aligned_cols=112 Identities=11% Similarity=0.010 Sum_probs=70.5
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhC----CC--CCCceEEeC-CCCCCCCC-C
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEA----PS--IPGVTHIGG-DMFNSIPA-A 220 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a----~~--~~ri~~~~~-d~~~~~p~-~ 220 (309)
..+.+.+- +....+|||+||++|.++.-.+....-.+ +.++|+-..-.+- +. ...|+|+.+ |++...|. +
T Consensus 68 ~ei~ek~~-l~~g~~VvDLGaapGGWSq~~a~~~g~~~-V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~~~~ 145 (267)
T 3p8z_A 68 QWFVERNM-VIPEGRVIDLGCGRGGWSYYCAGLKKVTE-VRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPPEKC 145 (267)
T ss_dssp HHHHHTTS-SCCCEEEEEESCTTSHHHHHHHTSTTEEE-EEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCCCCC
T ss_pred HHHHHhcC-CCCCCEEEEcCCCCCcHHHHHHHhcCCCE-EEEEecCCCCccCcchhhhcCcCceEEEeccceeecCCccc
Confidence 44555663 66778999999999999997777664446 9999983221111 11 378999999 97654443 5
Q ss_pred ceeeehhhhhc-CChhHH---HHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 221 NAIFMKWVLAT-WTDDEC---KLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 221 D~i~~~~vlh~-~~d~~~---~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
|++++--.=.. -+.-|. .++|.-+.+.|++ |-+++ ..+.|..
T Consensus 146 DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~-KVl~py~ 191 (267)
T 3p8z_A 146 DTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCI-KVLNPYM 191 (267)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEE-EESCCCS
T ss_pred cEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEE-EEccCCC
Confidence 98886432211 112233 3456666788888 66665 4555554
No 298
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.15 E-value=0.011 Score=51.39 Aligned_cols=105 Identities=12% Similarity=0.049 Sum_probs=61.4
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHh--cCCCc-eEEEeechhHHhhCCCC-CCc---eEEeC-CCCCCCCC-
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQK--HHFIC-EGINFDLPEVVGEAPSI-PGV---THIGG-DMFNSIPA- 219 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~--~p~~~-~~~~~D~p~~~~~a~~~-~ri---~~~~~-d~~~~~p~- 219 (309)
..+.+.+ -+....+|||+||+.|.++.-.++. -..++ ++++.|+ + +...... .++ ++..+ |+++..+.
T Consensus 63 ~EIdeK~-likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-~~P~~~~~~Gv~~i~~~~G~Df~~~~~~~ 139 (269)
T 2px2_A 63 RWLVERR-FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-EEPMLMQSYGWNIVTMKSGVDVFYKPSEI 139 (269)
T ss_dssp HHHHHTT-SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-CCCCCCCSTTGGGEEEECSCCGGGSCCCC
T ss_pred HHHHHcC-CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-cCCCcccCCCceEEEeeccCCccCCCCCC
Confidence 3444554 3677899999999999999998876 21112 1344453 1 1111111 455 55557 99875443
Q ss_pred Cceeeehhhhh--cC-ChhH-HHHHHHHHHHhcCCCc-EEEE
Q 021707 220 ANAIFMKWVLA--TW-TDDE-CKLIMENCYKALLAGG-KLIA 256 (309)
Q Consensus 220 ~D~i~~~~vlh--~~-~d~~-~~~iL~~~~~aL~pgG-~l~i 256 (309)
+|+|++=..-. ++ .|.. ...+|.=+.+.|+||| -+++
T Consensus 140 ~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~Fvv 181 (269)
T 2px2_A 140 SDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCI 181 (269)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEE
Confidence 59998532211 11 1111 2235666678999999 6666
No 299
>1on2_A Transcriptional regulator MNTR; helix-turn-helix, DNA-binding protein, metalloregulatory protein; 1.61A {Bacillus subtilis} SCOP: a.4.5.24 a.76.1.1 PDB: 2ev0_A 1on1_A 2ev5_A 2ev6_A* 2f5c_A 2f5d_A 2f5e_A 2f5f_A 2hyf_A* 2hyg_D 3r60_A* 3r61_A*
Probab=96.14 E-value=0.0051 Score=48.35 Aligned_cols=59 Identities=15% Similarity=0.082 Sum_probs=49.5
Q ss_pred hhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhc
Q 021707 10 RKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 10 ~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~ 76 (309)
+..++-.+++.|..+||+.+ ++++..+.+.++.|...|+|.+.. ...|.+|+.+..+..
T Consensus 13 i~~l~~~~~~~~~~ela~~l----~vs~~tvs~~l~~Le~~Glv~r~~----~~~~~LT~~g~~~~~ 71 (142)
T 1on2_A 13 IYMLIEEKGYARVSDIAEAL----AVHPSSVTKMVQKLDKDEYLIYEK----YRGLVLTSKGKKIGK 71 (142)
T ss_dssp HHHHHHHHSSCCHHHHHHHH----TSCHHHHHHHHHHHHHTTSEEEET----TTEEEECHHHHHHHH
T ss_pred HHHHHhhcCCCCHHHHHHHh----CCCHHHHHHHHHHHHHCCCEEEee----CceEEEchhHHHHHH
Confidence 33333345789999999999 999999999999999999999885 578999998866553
No 300
>3b73_A PHIH1 repressor-like protein; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 2.12A {Haloarcula marismortui atcc 43049}
Probab=96.07 E-value=0.0047 Score=46.94 Aligned_cols=65 Identities=12% Similarity=0.061 Sum_probs=53.2
Q ss_pred hhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhcC
Q 021707 7 RDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVTD 77 (309)
Q Consensus 7 ~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~~ 77 (309)
...+++++..++++|+.+||+.+ .. ++++..+.+-|+.|...|+|+..+ .+.|++|+.+..++.+
T Consensus 15 d~~IL~~L~~~g~~s~~eLA~~l-~~-giS~~aVs~rL~~Le~~GLV~~~~----rg~Y~LT~~G~~~l~~ 79 (111)
T 3b73_A 15 DDRILEIIHEEGNGSPKELEDRD-EI-RISKSSVSRRLKKLADHDLLQPLA----NGVYVITEEGEAYLNG 79 (111)
T ss_dssp HHHHHHHHHHHSCBCHHHHHTST-TC-CSCHHHHHHHHHHHHHTTSEEECS----TTCEEECHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCCHHHHHHHH-hc-CCCHHHHHHHHHHHHHCCCEEecC----CceEEECchHHHHHHH
Confidence 34566666567999999999988 11 468899999999999999999875 5699999999877765
No 301
>1r7j_A Conserved hypothetical protein SSO10A; winged helix-turn-helix, two-stranded antiparallel coiled CO structural genomics, PSI; 1.47A {Sulfolobus solfataricus} SCOP: a.4.5.49 PDB: 1xsx_A
Probab=95.98 E-value=0.01 Score=43.66 Aligned_cols=51 Identities=14% Similarity=0.221 Sum_probs=46.2
Q ss_pred CCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhc
Q 021707 16 ANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~ 76 (309)
.++ ++..+||..+ |++++.++..++.|...|++++.. +.|.+|+.|..+..
T Consensus 18 ~~~-~~~t~La~~~----~ls~~~~~~~l~~L~~~GLI~~~~-----~~~~LT~kG~~~l~ 68 (95)
T 1r7j_A 18 KSG-SPKTRIMYGA----NLSYALTGRYIKMLMDLEIIRQEG-----KQYMLTKKGEELLE 68 (95)
T ss_dssp TTC-BCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEET-----TEEEECHHHHHHHH
T ss_pred HcC-CCHHHHHHHh----CcCHHHHHHHHHHHHHCCCeEEEC-----CeeEEChhHHHHHH
Confidence 345 9999999999 999999999999999999999984 67999999987765
No 302
>1qbj_A Protein (double-stranded RNA specific adenosine D (ADAR1)); protein-Z-DNA complex, hydrolase-DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: a.4.5.19 PDB: 3f21_A* 3f22_A* 3f23_A* 3irr_A* 3irq_D* 2gxb_A 2acj_A 2l54_A
Probab=95.88 E-value=0.0088 Score=42.70 Aligned_cols=60 Identities=8% Similarity=0.061 Sum_probs=44.9
Q ss_pred hhhhhhcCCC---CCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhh
Q 021707 9 GRKKVRLANT---PLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSL 74 (309)
Q Consensus 9 g~~~~~l~~~---~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l 74 (309)
-+.+++..++ ++|+.|||+.+ |++...+.+.|.-|...|+|...+. .++.|.+.+....+
T Consensus 14 ~IL~~L~~~~pg~~~t~~eLA~~L----gvsr~tV~~~L~~Le~~G~I~~~g~--~~~~W~i~~~~~~~ 76 (81)
T 1qbj_A 14 RILKFLEELGEGKATTAHDLSGKL----GTPKKEINRVLYSLAKKGKLQKEAG--TPPLWKIAVSTQAW 76 (81)
T ss_dssp HHHHHHHHHCTTCCBCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEESS--SSCEEEEC------
T ss_pred HHHHHHHHcCCCCCcCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEecCC--CCCeeEEeCcHHhc
Confidence 3445555555 89999999999 9999999999999999999987652 25789998766544
No 303
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=95.86 E-value=0.018 Score=52.24 Aligned_cols=67 Identities=18% Similarity=0.204 Sum_probs=54.7
Q ss_pred cHHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhc-CCCceEEEeec-hhHHhhCCC--CCCceEEeCCCCC
Q 021707 147 FMTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKH-HFICEGINFDL-PEVVGEAPS--IPGVTHIGGDMFN 215 (309)
Q Consensus 147 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~~D~-p~~~~~a~~--~~ri~~~~~d~~~ 215 (309)
....+++.+. ...+..+||..+|.|.++.+++++. |+.+ ++++|. |.+++.+++ .+|++++.+++.+
T Consensus 45 Ll~Evl~~L~-i~pggiyVD~TlG~GGHS~~iL~~lg~~Gr-Vig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~ 115 (347)
T 3tka_A 45 LLDEAVNGLN-IRPDGIYIDGTFGRGGHSRLILSQLGEEGR-LLAIDRDPQAIAVAKTIDDPRFSIIHGPFSA 115 (347)
T ss_dssp TTHHHHHHTC-CCTTCEEEESCCTTSHHHHHHHTTCCTTCE-EEEEESCHHHHHHHTTCCCTTEEEEESCGGG
T ss_pred cHHHHHHhhC-CCCCCEEEEeCcCCCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHhhcCCcEEEEeCCHHH
Confidence 3567888885 6777899999999999999999985 7888 999999 777777643 2789999888754
No 304
>2oqg_A Possible transcriptional regulator, ARSR family P; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 1.54A {Rhodococcus SP}
Probab=95.75 E-value=0.0077 Score=45.32 Aligned_cols=59 Identities=14% Similarity=0.012 Sum_probs=46.5
Q ss_pred hhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhch
Q 021707 8 DGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGK 72 (309)
Q Consensus 8 ~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~ 72 (309)
..++..+ .+++.|..|||+.+ |+++..+.+.|+.|...|+|.....+ ....|++|+.+.
T Consensus 24 ~~IL~~L-~~~~~~~~ela~~l----~is~~tv~~~l~~L~~~gli~~~~~g-r~~~y~l~~~~~ 82 (114)
T 2oqg_A 24 WEILTEL-GRADQSASSLATRL----PVSRQAIAKHLNALQACGLVESVKVG-REIRYRALGAEL 82 (114)
T ss_dssp HHHHHHH-HHSCBCHHHHHHHS----SSCHHHHHHHHHHHHHTTSEEEEEET-TEEEEEECSHHH
T ss_pred HHHHHHH-HcCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCeeEEecC-CEEEEEechHHH
Confidence 4455544 67899999999999 99999999999999999999876511 023488887664
No 305
>1oyi_A Double-stranded RNA-binding protein; (alpha+beta) helix-turn-helix, viral protein; NMR {Vaccinia virus} SCOP: a.4.5.19
Probab=95.74 E-value=0.01 Score=42.32 Aligned_cols=60 Identities=10% Similarity=-0.006 Sum_probs=47.6
Q ss_pred hhhhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhc
Q 021707 5 ECRDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIG 71 (309)
Q Consensus 5 ~~~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~ 71 (309)
.....+.+++..++ +|+.|||+.+ |++...+++.|..|...|+|..... .+-+|+++...
T Consensus 17 ~~~~~IL~lL~~~g-~sa~eLAk~L----giSk~aVr~~L~~Le~eG~I~~~~~--~PP~W~~~~~~ 76 (82)
T 1oyi_A 17 EIVCEAIKTIGIEG-ATAAQLTRQL----NMEKREVNKALYDLQRSAMVYSSDD--IPPRWFMTTEA 76 (82)
T ss_dssp HHHHHHHHHHSSST-EEHHHHHHHS----SSCHHHHHHHHHHHHHHTSSEECSS--SSCEEESCC--
T ss_pred HHHHHHHHHHHHcC-CCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEeCCC--CCCcceeccCc
Confidence 44556666666555 9999999999 9999999999999999999988752 24688888654
No 306
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=95.73 E-value=0.015 Score=51.53 Aligned_cols=95 Identities=17% Similarity=0.090 Sum_probs=64.8
Q ss_pred CcceEEEecCCccHHHHHHHHhc-----CCCceEEEeec----hh-----------------------HHhhCCC-----
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKH-----HFICEGINFDL----PE-----------------------VVGEAPS----- 202 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~-----p~~~~~~~~D~----p~-----------------------~~~~a~~----- 202 (309)
.+..||++|+..|..++.+++.. |+-+ ++++|. |+ .++.+++
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~k-I~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRT-VWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCC-EEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCE-EEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 45799999999999998887664 4777 999994 11 0111211
Q ss_pred ---CCCceEEeCCCCCCCCC-----CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecc
Q 021707 203 ---IPGVTHIGGDMFNSIPA-----ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEP 259 (309)
Q Consensus 203 ---~~ri~~~~~d~~~~~p~-----~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~ 259 (309)
.++|+++.||+.+-+|. .|++++=-- . -+.....|..++..|+|||.|++-|.
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD---~-y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD---L-YESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCC---S-HHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC---c-cccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 27899999998654332 266665431 1 12346789999999999996666665
No 307
>3cuo_A Uncharacterized HTH-type transcriptional regulato; DNA-binding transcriptional regulator, structural genomics, MCSG; 2.00A {Escherichia coli K12}
Probab=95.72 E-value=0.012 Score=42.87 Aligned_cols=59 Identities=14% Similarity=0.048 Sum_probs=45.5
Q ss_pred hhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhc
Q 021707 8 DGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIG 71 (309)
Q Consensus 8 ~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~ 71 (309)
..++..+..+++.|..|||+.+ |+++..+.+.|+.|...|++.....+ ....|++++.+
T Consensus 27 ~~il~~l~~~~~~s~~ela~~l----~is~~tvs~~l~~L~~~glv~~~~~~-r~~~y~l~~~~ 85 (99)
T 3cuo_A 27 LLILCMLSGSPGTSAGELTRIT----GLSASATSQHLARMRDEGLIDSQRDA-QRILYSIKNEA 85 (99)
T ss_dssp HHHHHHHTTCCSEEHHHHHHHH----CCCHHHHHHHHHHHHHTTSEEEEECS-SCEEEEECCHH
T ss_pred HHHHHHHHhCCCcCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEEEecC-CEEEEEEChHH
Confidence 3445545455699999999999 99999999999999999999887521 12357777654
No 308
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=95.68 E-value=0.025 Score=50.12 Aligned_cols=110 Identities=14% Similarity=0.106 Sum_probs=66.5
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhh----CCC--CCCceEEeC-CCCCCCCC-C
Q 021707 149 TSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGE----APS--IPGVTHIGG-DMFNSIPA-A 220 (309)
Q Consensus 149 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~----a~~--~~ri~~~~~-d~~~~~p~-~ 220 (309)
..+.+.+. +....+|||+||++|.++.-++....-.+ +.++|+-..-.. .+. ..-|.++.+ |++...|. .
T Consensus 84 ~ei~~~~~-l~~~~~VlDLGaapGGwsq~~~~~~gv~~-V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~~~~ 161 (321)
T 3lkz_A 84 RWLVERRF-LEPVGKVIDLGCGRGGWCYYMATQKRVQE-VRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPSECC 161 (321)
T ss_dssp HHHHHTTS-CCCCEEEEEETCTTCHHHHHHTTCTTEEE-EEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCCCCC
T ss_pred HHHHHhcC-CCCCCEEEEeCCCCCcHHHHHHhhcCCCE-EEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCCCCC
Confidence 33445553 66677999999999999997776654445 999998221111 011 144889988 87655433 5
Q ss_pred ceeeehhhhhcCC--hhHH---HHHHHHHHHhcCCC-cEEEEeccccC
Q 021707 221 NAIFMKWVLATWT--DDEC---KLIMENCYKALLAG-GKLIACEPVLL 262 (309)
Q Consensus 221 D~i~~~~vlh~~~--d~~~---~~iL~~~~~aL~pg-G~l~i~e~~~~ 262 (309)
|++++--. ---+ .-|. .++|.-+-+.|++| |-+++ -.+.|
T Consensus 162 D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~-KVl~p 207 (321)
T 3lkz_A 162 DTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCV-KVLCP 207 (321)
T ss_dssp SEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEE-EESCT
T ss_pred CEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEE-EEcCC
Confidence 88886332 1111 1122 34566667888888 76666 34444
No 309
>1qgp_A Protein (double stranded RNA adenosine deaminase); Z-alpha-Z-DNA binding domain, RNA-editing, Z-DNA recognition, ADAR1, helix- turn-helix; NMR {Homo sapiens} SCOP: a.4.5.19
Probab=95.68 E-value=0.006 Score=43.12 Aligned_cols=55 Identities=9% Similarity=0.073 Sum_probs=44.5
Q ss_pred hhhhhhcCCC---CCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcCh
Q 021707 9 GRKKVRLANT---PLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTE 69 (309)
Q Consensus 9 g~~~~~l~~~---~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~ 69 (309)
.+.+++..++ ++|+.|||+.+ |++...+.+.|.-|...|++...+. .++.|.+++
T Consensus 18 ~IL~~L~~~~~~~~~t~~eLA~~L----gvs~~tV~~~L~~L~~~G~I~~~g~--~~~~W~i~~ 75 (77)
T 1qgp_A 18 RILKFLEELGEGKATTAHDLSGKL----GTPKKEINRVLYSLAKKGKLQKEAG--TPPLWKIAV 75 (77)
T ss_dssp HHHHHHHHHCSSSCEEHHHHHHHH----CCCHHHHHHHHHHHHHHTSEEEECS--SSCEEEECC
T ss_pred HHHHHHHHcCCCCCcCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEecCC--CCCceEecC
Confidence 3444444455 89999999999 9999999999999999999988752 257888775
No 310
>3pqk_A Biofilm growth-associated repressor; helix-turn-helix motif, winged-helix fold, transcriptional R DNA binding, transcription; 2.09A {Xylella fastidiosa} PDB: 3pqj_A
Probab=95.61 E-value=0.021 Score=42.17 Aligned_cols=56 Identities=23% Similarity=0.220 Sum_probs=44.4
Q ss_pred hhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcCh
Q 021707 8 DGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTE 69 (309)
Q Consensus 8 ~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~ 69 (309)
+.++..+ .+++.|+.|||+.+ |+++..+.+-|+.|...|+|.....+. ...|++++
T Consensus 26 ~~Il~~L-~~~~~~~~ela~~l----~is~~tvs~~L~~L~~~Glv~~~~~g~-~~~y~l~~ 81 (102)
T 3pqk_A 26 LMLVCTL-VEGEFSVGELEQQI----GIGQPTLSQQLGVLRESGIVETRRNIK-QIFYRLTE 81 (102)
T ss_dssp HHHHHHH-HTCCBCHHHHHHHH----TCCTTHHHHHHHHHHHTTSEEEECSSS-CCEEEECS
T ss_pred HHHHHHH-HhCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCeEEEEeCC-EEEEEECc
Confidence 3344444 46899999999999 999999999999999999998775221 23688876
No 311
>3jth_A Transcription activator HLYU; transcription factor, RTXA, DNA-binding, transcription regulation; 2.00A {Vibrio vulnificus}
Probab=95.57 E-value=0.017 Score=42.33 Aligned_cols=57 Identities=19% Similarity=0.141 Sum_probs=44.9
Q ss_pred hhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChh
Q 021707 8 DGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEI 70 (309)
Q Consensus 8 ~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~ 70 (309)
+.++..+ .+++.|+.|||+.+ |+++..+.+-|+.|...|+|.....+. .-.|++++.
T Consensus 26 ~~Il~~L-~~~~~~~~ela~~l----~is~~tvs~~L~~L~~~Glv~~~~~g~-~~~y~l~~~ 82 (98)
T 3jth_A 26 LQILCML-HNQELSVGELCAKL----QLSQSALSQHLAWLRRDGLVTTRKEAQ-TVYYTLKSE 82 (98)
T ss_dssp HHHHHHT-TTSCEEHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEECCTT-CCEEEECCH
T ss_pred HHHHHHH-hcCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCeEEEEeCC-EEEEEECHH
Confidence 3455544 45999999999999 999999999999999999998775221 235877764
No 312
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=95.54 E-value=0.022 Score=52.33 Aligned_cols=110 Identities=13% Similarity=0.017 Sum_probs=72.5
Q ss_pred hhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCC------------CCCCceEEeCCCCCC---
Q 021707 153 DSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAP------------SIPGVTHIGGDMFNS--- 216 (309)
Q Consensus 153 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~------------~~~ri~~~~~d~~~~--- 216 (309)
..++ .+.+.+|||+.+|.|.=+..+++..++-+ ++..|. +.-+...+ ...++.+...|....
T Consensus 142 ~~L~-~~pg~~VLD~CAaPGGKT~~la~~~~~~~-l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~ 219 (359)
T 4fzv_A 142 LALG-LQPGDIVLDLCAAPGGKTLALLQTGCCRN-LAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGEL 219 (359)
T ss_dssp HHHC-CCTTEEEEESSCTTCHHHHHHHHTTCEEE-EEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHH
T ss_pred HHhC-CCCCCEEEEecCCccHHHHHHHHhcCCCc-EEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchh
Confidence 3444 56678999999999999999998877666 899997 22222211 125788888887553
Q ss_pred CCC-Cceeee----hh----hh-------hcCChhH-------HHHHHHHHHHhcCCCcEEEEeccccCCC
Q 021707 217 IPA-ANAIFM----KW----VL-------ATWTDDE-------CKLIMENCYKALLAGGKLIACEPVLLDD 264 (309)
Q Consensus 217 ~p~-~D~i~~----~~----vl-------h~~~d~~-------~~~iL~~~~~aL~pgG~l~i~e~~~~~~ 264 (309)
.+. +|.|++ +. ++ +.|..++ -.+||+++.+.|+|||+|+-..-.+...
T Consensus 220 ~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ 290 (359)
T 4fzv_A 220 EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHL 290 (359)
T ss_dssp STTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTT
T ss_pred ccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchh
Confidence 333 488873 22 12 1222222 2579999999999999887555444443
No 313
>1u2w_A CADC repressor, cadmium efflux system accessory protein; LEAD, SOFT metal ION resistance, ARSR/SM family, DNA binding protein; 1.90A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 3f72_A
Probab=95.42 E-value=0.011 Score=45.48 Aligned_cols=58 Identities=24% Similarity=0.198 Sum_probs=44.6
Q ss_pred hhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChh
Q 021707 8 DGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEI 70 (309)
Q Consensus 8 ~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~ 70 (309)
+.++..+..+++.|+.|||+.+ |+++..+.+.|+.|...|++.....+. ...|++++.
T Consensus 45 l~IL~~L~~~~~~s~~eLa~~l----~is~stvs~~L~~L~~~Glv~~~~~gr-~~~y~l~~~ 102 (122)
T 1u2w_A 45 AKITYALCQDEELCVCDIANIL----GVTIANASHHLRTLYKQGVVNFRKEGK-LALYSLGDE 102 (122)
T ss_dssp HHHHHHHHHSSCEEHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEC-----CCEEEESCH
T ss_pred HHHHHHHHHCCCcCHHHHHHHH----CcCHHHHHHHHHHHHHCCCeEEEEECC-EEEEEECHH
Confidence 3455555447899999999999 999999999999999999998765211 235888764
No 314
>2htj_A P fimbrial regulatory protein KS71A; winged helix-turn-helix, PAP PILI, transcription activator; NMR {Escherichia coli} SCOP: a.4.5.73
Probab=95.35 E-value=0.019 Score=40.66 Aligned_cols=56 Identities=11% Similarity=-0.016 Sum_probs=42.7
Q ss_pred hhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeeccc-ccCceEEcCh
Q 021707 10 RKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREF-RGERKYSLTE 69 (309)
Q Consensus 10 ~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~-~~~~~y~~t~ 69 (309)
+++.+..+++.|..|||+.+ |++...+.+.|..|...|++...... .....|.+++
T Consensus 5 Il~~L~~~~~~s~~eLa~~l----gvs~~tv~r~L~~L~~~GlI~~~~~~~gr~~~y~l~~ 61 (81)
T 2htj_A 5 ILEFLNRHNGGKTAEIAEAL----AVTDYQARYYLLLLEKAGMVQRSPLRRGMATYWFLKG 61 (81)
T ss_dssp HHHHHHHSCCCCHHHHHHHH----TSCHHHHHHHHHHHHHHTSEEEECCSSSSSCEEEESS
T ss_pred HHHHHHHcCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEEeccCCCCcEEEEECh
Confidence 44555556899999999999 99999999999999999999854311 1123566654
No 315
>2x4h_A Hypothetical protein SSO2273; transcription; 2.30A {Sulfolobus solfataricus}
Probab=95.33 E-value=0.03 Score=43.56 Aligned_cols=51 Identities=10% Similarity=0.089 Sum_probs=45.3
Q ss_pred CCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhh
Q 021707 16 ANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLV 75 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~ 75 (309)
.+++.|..+||+.+ +++...+.+.++.|...|+|.+.. ..|.+|+.+..+.
T Consensus 28 ~~~~~s~~ela~~l----~is~~tv~~~l~~Le~~Gli~r~~-----~~~~Lt~~g~~~~ 78 (139)
T 2x4h_A 28 SGEGAKINRIAKDL----KIAPSSVFEEVSHLEEKGLVKKKE-----DGVWITNNGTRSI 78 (139)
T ss_dssp TTSCBCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEET-----TEEEECHHHHHHH
T ss_pred cCCCcCHHHHHHHh----CCChHHHHHHHHHHHHCCCEEecC-----CeEEEChhHHHHH
Confidence 46799999999999 999999999999999999999873 5799999886554
No 316
>2pg4_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, DNA binding protein; HET: MSE CIT; 2.21A {Aeropyrum pernix} SCOP: a.4.5.48
Probab=95.29 E-value=0.014 Score=42.49 Aligned_cols=57 Identities=19% Similarity=0.222 Sum_probs=45.7
Q ss_pred CCC-CCCHHHHHHHhCcCCCCCcch-HHHHHHHHHcCCceeeecccccCceEEcChhchhhhc
Q 021707 16 ANT-PLSVSQILTCILPSGGGDAEN-LQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 16 ~~~-~~t~~eLA~~~~~~~g~~~~~-l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~ 76 (309)
..+ +.|..|||+.+ ++++.. +.+.++.|...|+|..+..+...-.+.+|+.+..+..
T Consensus 26 ~~~~~~t~~eLa~~l----~is~~t~vs~~l~~Le~~Glv~~~~~drR~~~~~LT~~G~~~~~ 84 (95)
T 2pg4_A 26 KKGYEPSLAEIVKAS----GVSEKTFFMGLKDRLIRAGLVKEETLSYRVKTLKLTEKGRRLAE 84 (95)
T ss_dssp HTTCCCCHHHHHHHH----CCCHHHHHTTHHHHHHHTTSEEEEEEETTEEEEEECHHHHHHHH
T ss_pred hcCCCCCHHHHHHHH----CCCchHHHHHHHHHHHHCCCeecCCCCCCeEEEEECHhHHHHHH
Confidence 345 89999999999 999999 9999999999999995432222235889998876654
No 317
>3hrs_A Metalloregulator SCAR; DTXR/MNTR family member, transcription; 2.70A {Streptococcus gordonii} PDB: 3hrt_A 3hru_A
Probab=95.27 E-value=0.029 Score=47.52 Aligned_cols=62 Identities=13% Similarity=0.209 Sum_probs=52.9
Q ss_pred hhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhc
Q 021707 7 RDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 7 ~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~ 76 (309)
+..++.+.-.+++++..+||+.+ ++++..+.+.++.|...|+|.+.. ...+.+|+.|+.+..
T Consensus 8 L~~I~~l~~~~~~~~~~~lA~~l----~vs~~tvs~~l~~Le~~GlV~r~~----~~~i~LT~~G~~~~~ 69 (214)
T 3hrs_A 8 LKCLYELGTRHNKITNKEIAQLM----QVSPPAVTEMMKKLLAEELLIKDK----KAGYLLTDLGLKLVS 69 (214)
T ss_dssp HHHHHHTTSSCSCCCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEET----TTEEEECHHHHHHHH
T ss_pred HHHHHHHHhcCCCcCHHHHHHHH----CCChhHHHHHHHHHHHCCCEEEec----CCCeEECHHHHHHHH
Confidence 44555555567899999999999 999999999999999999999986 678999999976654
No 318
>2y75_A HTH-type transcriptional regulator CYMR; DNA binding protein; 2.00A {Bacillus subtilis}
Probab=95.23 E-value=0.022 Score=44.09 Aligned_cols=47 Identities=19% Similarity=0.210 Sum_probs=39.2
Q ss_pred CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcCh
Q 021707 17 NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTE 69 (309)
Q Consensus 17 ~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~ 69 (309)
+++.|.+|||+.+ ++++..++++|..|...|+|+...+ ..|.|.++.
T Consensus 24 ~~~~s~~ela~~~----~i~~~~v~~il~~L~~~Glv~~~~g--~~ggy~L~~ 70 (129)
T 2y75_A 24 EGPTSLKSIAQTN----NLSEHYLEQLVSPLRNAGLVKSIRG--AYGGYVLGS 70 (129)
T ss_dssp SCCBCHHHHHHHT----TSCHHHHHHHHHHHHHTTSEEEC------CCEEESS
T ss_pred CCcCCHHHHHHHH----CcCHHHHHHHHHHHHHCCceEecCC--CCCceEeCC
Confidence 4689999999999 9999999999999999999987641 136788775
No 319
>1tbx_A ORF F-93, hypothetical 11.0 kDa protein; sulfolobus spindle virus, winged helix, fusellovirus; 2.70A {Sulfolobus virus 1} SCOP: a.4.5.48
Probab=95.21 E-value=0.025 Score=41.37 Aligned_cols=63 Identities=19% Similarity=0.166 Sum_probs=50.3
Q ss_pred hhhhhhcCCCCCCHHHH----HHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhc
Q 021707 9 GRKKVRLANTPLSVSQI----LTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 9 g~~~~~l~~~~~t~~eL----A~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~ 76 (309)
.++..+..+++.|..|| |+.+ ++++..+.++++.|...|++.+.... ....|.+|+.|..+..
T Consensus 12 ~iL~~l~~~~~~~~~el~~~la~~l----~is~~tvs~~l~~Le~~gli~r~~~~-r~~~~~LT~~G~~~~~ 78 (99)
T 1tbx_A 12 IVLAYLYDNEGIATYDLYKKVNAEF----PMSTATFYDAKKFLIQEGFVKERQER-GEKRLYLTEKGKLFAI 78 (99)
T ss_dssp HHHHHHTTCTTCBHHHHHHHHHTTS----CCCHHHHHHHHHHHHHTTSEEEEEET-TEEEEEECHHHHHHHH
T ss_pred HHHHHHHHcCCcCHHHHHHHHHHHc----CCCHHHHHHHHHHHHHCCCEEEEecC-CceEEEECHHHHHHHH
Confidence 34444555689999999 9999 99999999999999999999886421 1346899998877665
No 320
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=95.16 E-value=0.014 Score=41.30 Aligned_cols=46 Identities=13% Similarity=0.094 Sum_probs=40.8
Q ss_pred hhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeee
Q 021707 7 RDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEH 56 (309)
Q Consensus 7 ~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~ 56 (309)
+.-+.+.+-.++.++++|||+.+ ++++..++|.|..|...|++.+.
T Consensus 4 L~~Il~~L~~~g~vsv~eLa~~l----~VS~~TIRrdL~~Le~~G~l~R~ 49 (78)
T 1xn7_A 4 LIQVRDLLALRGRMEAAQISQTL----NTPQPMINAMLQQLESMGKAVRI 49 (78)
T ss_dssp HHHHHHHHHHSCSBCHHHHHHHT----TCCHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHHcCCCcHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEEe
Confidence 34455666668999999999999 99999999999999999999887
No 321
>2k02_A Ferrous iron transport protein C; FEOC, iron-sulfur, metal-binding, metal binding protein; NMR {Klebsiella pneumoniae subsp}
Probab=95.15 E-value=0.013 Score=42.37 Aligned_cols=47 Identities=6% Similarity=0.050 Sum_probs=41.3
Q ss_pred hhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeec
Q 021707 7 RDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 7 ~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
+.-+.+.+-.++.++++|||+.+ ++++..++|.|..|...|++.+..
T Consensus 4 L~~Il~~L~~~g~vsv~eLA~~l----~VS~~TIRrDL~~Le~~G~l~R~~ 50 (87)
T 2k02_A 4 LMEVRDMLALQGRMEAKQLSARL----QTPQPLIDAMLERMEAMGKVVRIS 50 (87)
T ss_dssp THHHHHHHHHSCSEEHHHHHHHT----TCCHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHHcCCCcHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEEEe
Confidence 34456666668999999999999 999999999999999999999874
No 322
>1r1u_A CZRA, repressor protein; zinc, DNA binding, transcriptional regulation, winged HTH protein, transcription repressor; 2.00A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 1r1v_A 2kjb_A 2kjc_A
Probab=95.13 E-value=0.019 Score=42.76 Aligned_cols=58 Identities=24% Similarity=0.204 Sum_probs=44.7
Q ss_pred hhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChh
Q 021707 7 RDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEI 70 (309)
Q Consensus 7 ~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~ 70 (309)
++.++..+. +++.|+.|||+.+ |+++..+.+.|+.|...|++.....+ ....|++++.
T Consensus 28 r~~IL~~L~-~~~~~~~ela~~l----~is~stvs~~L~~L~~~Glv~~~~~g-r~~~y~l~~~ 85 (106)
T 1r1u_A 28 RIRIMELLS-VSEASVGHISHQL----NLSQSNVSHQLKLLKSVHLVKAKRQG-QSMIYSLDDI 85 (106)
T ss_dssp HHHHHHHHH-HCCBCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEEET-TEEEEEESSH
T ss_pred HHHHHHHHH-hCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCeEEEEeC-CEEEEEEChH
Confidence 445555554 7889999999999 99999999999999999999876521 0124666653
No 323
>2wte_A CSA3; antiviral protein, viral resistance, winged helix-turn-helix prnai nucleotide-binding domain; HET: MSE; 1.80A {Sulfolobus solfataricus}
Probab=95.10 E-value=0.019 Score=49.81 Aligned_cols=60 Identities=15% Similarity=0.325 Sum_probs=50.2
Q ss_pred hhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhc
Q 021707 10 RKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 10 ~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~ 76 (309)
+...+..++++|..|||+.+ |++...+.|.|+.|...|++++.+ ....|++|+.+..+..
T Consensus 157 IL~~L~~~~~~s~~eLA~~l----glsksTv~r~L~~Le~~GlV~r~~---r~~~~~LT~~G~~l~~ 216 (244)
T 2wte_A 157 LLNVLYETKGTGITELAKML----DKSEKTLINKIAELKKFGILTQKG---KDRKVELNELGLNVIK 216 (244)
T ss_dssp HHHHHHHHTCBCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEET---TTTEEEECHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEEeC---CccEEEECHHHHHHHH
Confidence 33433456899999999999 999999999999999999999874 2568999999977654
No 324
>3mq0_A Transcriptional repressor of the blcabc operon; helix-turn-helix, GAF fold, transcription repressor; 1.79A {Agrobacterium tumefaciens}
Probab=95.06 E-value=0.017 Score=50.91 Aligned_cols=47 Identities=6% Similarity=0.163 Sum_probs=41.0
Q ss_pred CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhc
Q 021707 17 NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIG 71 (309)
Q Consensus 17 ~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~ 71 (309)
++++|+.|||+.+ |++.-.+.|+|..|+..|+|.+++ +++|++++..
T Consensus 43 ~~~ltl~eia~~l----gl~ksTv~RlL~tL~~~G~v~~~~----~~~Y~LG~~~ 89 (275)
T 3mq0_A 43 PRDLTAAELTRFL----DLPKSSAHGLLAVMTELDLLARSA----DGTLRIGPHS 89 (275)
T ss_dssp SSCEEHHHHHHHH----TCC--CHHHHHHHHHHTTSEEECT----TSEEEECTHH
T ss_pred CCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEECC----CCcEEehHHH
Confidence 4689999999999 999999999999999999999986 5789999854
No 325
>2kko_A Possible transcriptional regulatory protein (possibly ARSR-family); NESG, DNA-binding, transcription regulation, WHTH, homodimer; NMR {Mycobacterium bovis} PDB: 3gw2_A
Probab=95.02 E-value=0.017 Score=43.37 Aligned_cols=58 Identities=22% Similarity=0.184 Sum_probs=44.7
Q ss_pred hhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChh
Q 021707 7 RDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEI 70 (309)
Q Consensus 7 ~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~ 70 (309)
++.++..+ .+++.|+.|||+.+ |+++..+.+.|+.|...|+|.....+. ...|++++.
T Consensus 27 r~~IL~~L-~~~~~s~~eLa~~l----gis~stvs~~L~~L~~~GlV~~~~~gr-~~~y~l~~~ 84 (108)
T 2kko_A 27 RLQILDLL-AQGERAVEAIATAT----GMNLTTASANLQALKSGGLVEARREGT-RQYYRIAGE 84 (108)
T ss_dssp THHHHHHH-TTCCEEHHHHHHHH----TCCHHHHHHHHHHHHHHTSEEEEEETT-EEEEEESCH
T ss_pred HHHHHHHH-HcCCcCHHHHHHHH----CcCHHHHHHHHHHHHHCCCeEEEEeCC-EEEEEEChH
Confidence 34455544 46899999999999 999999999999999999998765210 125777753
No 326
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=94.93 E-value=0.053 Score=49.59 Aligned_cols=54 Identities=7% Similarity=-0.065 Sum_probs=41.3
Q ss_pred cceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCC---CCCCceEEeCCCCC
Q 021707 161 VKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAP---SIPGVTHIGGDMFN 215 (309)
Q Consensus 161 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~---~~~ri~~~~~d~~~ 215 (309)
...|||||.|.|.++..|+++....+ +++++. +..+...+ ..++++++.+|+++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~-vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~ 116 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQ-YSLLEKRSSLYKFLNAKFEGSPLQILKRDPYD 116 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSE-EEEECCCHHHHHHHHHHTTTSSCEEECSCTTC
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCE-EEEEecCHHHHHHHHHhccCCCEEEEECCccc
Confidence 47899999999999999998754445 888887 33333222 35799999999964
No 327
>1ub9_A Hypothetical protein PH1061; helix-turn-helix motif, winged helix motif, structural genom transcription; 2.05A {Pyrococcus horikoshii} SCOP: a.4.5.28
Probab=94.90 E-value=0.014 Score=42.50 Aligned_cols=64 Identities=20% Similarity=0.191 Sum_probs=48.5
Q ss_pred hhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhh
Q 021707 8 DGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLV 75 (309)
Q Consensus 8 ~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~ 75 (309)
..++..+..+++.|..|||+.+ ++++..+.+.|+.|...|++..... +.....|++|+.+....
T Consensus 19 ~~iL~~L~~~~~~~~~ela~~l----~is~~tvs~~l~~L~~~gli~~~~~~~~~r~~~~~lt~~g~~~~ 84 (100)
T 1ub9_A 19 LGIMIFLLPRRKAPFSQIQKVL----DLTPGNLDSHIRVLERNGLVKTYKVIADRPRTVVEITDFGMEEA 84 (100)
T ss_dssp HHHHHHHHHHSEEEHHHHHHHT----TCCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECHHHHHHH
T ss_pred HHHHHHHHhcCCcCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEEEecCCCcceEEEEECHHHHHHH
Confidence 4455545456899999999999 9999999999999999999986431 11124688998775433
No 328
>3r4k_A Transcriptional regulator, ICLR family; DNA/RNA-binding 3-helical bundle, profilin-like, structural joint center for structural genomics, JCSG; 2.46A {Ruegeria SP}
Probab=94.90 E-value=0.019 Score=50.27 Aligned_cols=48 Identities=17% Similarity=0.250 Sum_probs=43.0
Q ss_pred CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhc
Q 021707 17 NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIG 71 (309)
Q Consensus 17 ~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~ 71 (309)
++++|+.|||+.+ |++.-.+.|+|..|+..|++.+++ ..++|++++..
T Consensus 19 ~~~lsl~eia~~l----gl~ksT~~RlL~tL~~~G~v~~~~---~~~~Y~lG~~~ 66 (260)
T 3r4k_A 19 RLEIGLSDLTRLS----GMNKATVYRLMSELQEAGFVEQVE---GARSYRLGPQV 66 (260)
T ss_dssp BSEEEHHHHHHHH----CSCHHHHHHHHHHHHHTTSEEECS---SSSEEEECTTH
T ss_pred CCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEEcC---CCCcEEcCHHH
Confidence 4689999999999 999999999999999999999986 23799999854
No 329
>3lwf_A LIN1550 protein, putative transcriptional regulator; structural genomics, JOI for structural genomics, JCSG; HET: SO4; 2.06A {Listeria innocua}
Probab=94.86 E-value=0.037 Score=44.73 Aligned_cols=47 Identities=19% Similarity=0.269 Sum_probs=40.5
Q ss_pred CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcCh
Q 021707 17 NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTE 69 (309)
Q Consensus 17 ~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~ 69 (309)
+++.|.++||+.. ++++..++++|..|...|+|....+ ..|.|.++.
T Consensus 42 ~~~~s~~eIA~~~----~i~~~~l~kil~~L~~aGlv~s~rG--~~GGy~Lar 88 (159)
T 3lwf_A 42 DGPISLRSIAQDK----NLSEHYLEQLIGPLRNAGIVKSIRG--AHGGYVLNG 88 (159)
T ss_dssp SCCBCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEECS--TTCEEEECS
T ss_pred CCCcCHHHHHHHH----CcCHHHHHHHHHHHHHCCeEEEecC--CCCceEecC
Confidence 4689999999999 9999999999999999999987752 146788764
No 330
>3f6o_A Probable transcriptional regulator, ARSR family protein; transcriptional regulator,RHA00566,MCSG, structural genomics, PSI-2; 1.90A {Rhodococcus SP}
Probab=94.83 E-value=0.02 Score=43.68 Aligned_cols=60 Identities=15% Similarity=0.135 Sum_probs=47.3
Q ss_pred hhhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhc
Q 021707 6 CRDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIG 71 (309)
Q Consensus 6 ~~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~ 71 (309)
.++.++..+. ++|.|+.|||+.+ |+++..+.+.|+.|...|+|.....+. .-.|++++.+
T Consensus 19 ~R~~Il~~L~-~~~~~~~eLa~~l----~is~~tvs~hL~~L~~~GlV~~~~~gr-~~~y~l~~~~ 78 (118)
T 3f6o_A 19 TRRAVLGRLS-RGPATVSELAKPF----DMALPSFMKHIHFLEDSGWIRTHKQGR-VRTCAIEKEP 78 (118)
T ss_dssp HHHHHHHHHH-TCCEEHHHHHTTC----CSCHHHHHHHHHHHHHTTSEEEEEETT-EEEEEECSHH
T ss_pred HHHHHHHHHH-hCCCCHHHHHHHh----CcCHHHHHHHHHHHHHCCCeEEEecCC-EEEEEECHHH
Confidence 3445555554 7999999999999 999999999999999999998765221 2368888754
No 331
>2h09_A Transcriptional regulator MNTR; transcription regulator, diphtheria toxin, manganese transport, structural genomics, NPPSFA; 2.10A {Escherichia coli}
Probab=94.76 E-value=0.03 Score=44.52 Aligned_cols=55 Identities=16% Similarity=0.136 Sum_probs=47.0
Q ss_pred hcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhc
Q 021707 14 RLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 14 ~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~ 76 (309)
+..+++.|..+||+.+ +++...+.+.|+.|...|+|.... +..+.+|+.+..+..
T Consensus 49 l~~~~~~~~~~la~~l----~vs~~tvs~~l~~Le~~Glv~r~~----~~~~~lT~~g~~~~~ 103 (155)
T 2h09_A 49 IREVGEARQVDMAARL----GVSQPTVAKMLKRLATMGLIEMIP----WRGVFLTAEGEKLAQ 103 (155)
T ss_dssp HHHHSCCCHHHHHHHH----TSCHHHHHHHHHHHHHTTCEEEET----TTEEEECHHHHHHHH
T ss_pred HHhCCCcCHHHHHHHh----CcCHHHHHHHHHHHHHCCCEEEec----CCceEEChhHHHHHH
Confidence 3345789999999999 999999999999999999998875 567899998866543
No 332
>1ylf_A RRF2 family protein; structural genomics, transcription regulator, P protein structure initiative; 2.50A {Bacillus cereus atcc 14579} SCOP: a.4.5.55
Probab=94.75 E-value=0.024 Score=45.17 Aligned_cols=47 Identities=11% Similarity=0.101 Sum_probs=39.5
Q ss_pred CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChh
Q 021707 17 NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEI 70 (309)
Q Consensus 17 ~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~ 70 (309)
+++.|.++||+.. ++++..++++|..|...|+|+...+ .|.|.++..
T Consensus 28 ~~~~~~~~iA~~~----~i~~~~l~kil~~L~~~Glv~s~rG---~GGy~L~~~ 74 (149)
T 1ylf_A 28 SSLCTSDYMAESV----NTNPVVIRKIMSYLKQAGFVYVNRG---PGGAGLLKD 74 (149)
T ss_dssp GGGCCHHHHHHHH----TSCHHHHHHHHHHHHHTTSEEEC------CCEEESSC
T ss_pred CCCcCHHHHHHHH----CcCHHHHHHHHHHHHHCCcEEEccC---CCceEeCCC
Confidence 4689999999999 9999999999999999999987652 466887753
No 333
>3f6v_A Possible transcriptional regulator, ARSR family protein; probable transcriptional repressor ARSR family, structural genomics, PSI-2; 1.48A {Rhodococcus SP}
Probab=94.74 E-value=0.025 Score=45.32 Aligned_cols=61 Identities=20% Similarity=0.244 Sum_probs=48.8
Q ss_pred hhhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhch
Q 021707 6 CRDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGK 72 (309)
Q Consensus 6 ~~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~ 72 (309)
.++.++..+. +++.|+.|||+.+ |++...+.+-|+.|...|+|.....+. .-.|++++.+.
T Consensus 59 ~R~~IL~~L~-~~~~t~~eLa~~l----gls~stvs~hL~~L~~aGlV~~~~~Gr-~~~y~lt~~~~ 119 (151)
T 3f6v_A 59 TRRRLVQLLT-SGEQTVNNLAAHF----PASRSAISQHLRVLTEAGLVTPRKDGR-FRYYRLDPQGL 119 (151)
T ss_dssp HHHHHHHHGG-GCCEEHHHHHTTS----SSCHHHHHHHHHHHHHTTSEEEEEETT-EEEEEECHHHH
T ss_pred HHHHHHHHHH-hCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEEEecCC-EEEEEEChHHH
Confidence 4555666554 7899999999999 999999999999999999998775211 23688888663
No 334
>1mkm_A ICLR transcriptional regulator; structural genomics, winged helix-turn-helix, PSI, protein structure initiative; 2.20A {Thermotoga maritima} SCOP: a.4.5.33 d.110.2.2
Probab=94.66 E-value=0.031 Score=48.40 Aligned_cols=46 Identities=17% Similarity=0.153 Sum_probs=42.0
Q ss_pred CCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhc
Q 021707 18 TPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIG 71 (309)
Q Consensus 18 ~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~ 71 (309)
++.|+.|||+.+ |++...+.|+|+.|...|++.+.. ++.|++++..
T Consensus 22 ~~~~~~ela~~~----gl~~stv~r~l~~L~~~G~v~~~~----~~~Y~lg~~~ 67 (249)
T 1mkm_A 22 GDVSVSEIAEKF----NMSVSNAYKYMVVLEEKGFVLRKK----DKRYVPGYKL 67 (249)
T ss_dssp SCBCHHHHHHHT----TCCHHHHHHHHHHHHHTTSEEECT----TSCEEECTHH
T ss_pred CCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCcEEECC----CCcEEECHHH
Confidence 489999999999 999999999999999999999874 6789998854
No 335
>2fsw_A PG_0823 protein; alpha-beta structure, helix-turn-helix, winged-helix-turn-HE structural genomics, PSI, protein structure initiative; HET: MSE; 2.16A {Porphyromonas gingivalis} SCOP: a.4.5.69
Probab=94.62 E-value=0.033 Score=41.61 Aligned_cols=57 Identities=18% Similarity=0.241 Sum_probs=46.4
Q ss_pred CCCCCCHHHHHHHhCcCCC-CCcchHHHHHHHHHcCCceeeecccc--cCceEEcChhchhhhc
Q 021707 16 ANTPLSVSQILTCILPSGG-GDAENLQCILRLLTSYGVFSEHREFR--GERKYSLTEIGKSLVT 76 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~~~g-~~~~~l~rlL~~L~~~gll~~~~~~~--~~~~y~~t~~~~~l~~ 76 (309)
.+++.+..||++.+ + +++..+.+.|+.|...|+|++..... ..-.|++|+.|..+..
T Consensus 35 ~~~~~~~~eL~~~l----~gis~~~ls~~L~~Le~~GlV~r~~~~~d~r~~~y~LT~~G~~l~~ 94 (107)
T 2fsw_A 35 NRRIIRYGELKRAI----PGISEKMLIDELKFLCGKGLIKKKQYPEVPPRVEYSLTPLGEKVLP 94 (107)
T ss_dssp TTSCEEHHHHHHHS----TTCCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECHHHHTTHH
T ss_pred HhCCcCHHHHHHHc----ccCCHHHHHHHHHHHHHCCCEEEeecCCCCCeeEEEECccHHHHHH
Confidence 47899999999999 8 99999999999999999998765211 1135999999866553
No 336
>2jsc_A Transcriptional regulator RV1994C/MT2050; cadmium, transcriptional repressor, solution structure, STRU genomics; NMR {Mycobacterium tuberculosis}
Probab=94.58 E-value=0.028 Score=42.88 Aligned_cols=58 Identities=17% Similarity=0.123 Sum_probs=45.1
Q ss_pred hhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChh
Q 021707 7 RDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEI 70 (309)
Q Consensus 7 ~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~ 70 (309)
++.++..+ .+++.++.|||+.+ |+++..+.+.|+.|...|++.....+ ..-.|++++.
T Consensus 23 r~~IL~~L-~~~~~~~~eLa~~l----gis~stvs~~L~~L~~~GlV~~~~~g-r~~~y~l~~~ 80 (118)
T 2jsc_A 23 RCRILVAL-LDGVCYPGQLAAHL----GLTRSNVSNHLSCLRGCGLVVATYEG-RQVRYALADS 80 (118)
T ss_dssp HHHHHHHH-HTTCCSTTTHHHHH----SSCHHHHHHHHHHHTTTTSEEEEECS-SSEEEEESSH
T ss_pred HHHHHHHH-HcCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCceEEEEEC-CEEEEEEChH
Confidence 44555554 36889999999999 99999999999999999999876521 1225777753
No 337
>2xrn_A HTH-type transcriptional regulator TTGV; DNA-binding protein, tetramer gene regulator, cooperative DN binding, multidrug binding protein; 2.90A {Pseudomonas putida} PDB: 2xro_A
Probab=94.47 E-value=0.035 Score=47.86 Aligned_cols=50 Identities=18% Similarity=0.123 Sum_probs=43.5
Q ss_pred CCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhh
Q 021707 18 TPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSL 74 (309)
Q Consensus 18 ~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l 74 (309)
++.|+.|||+.+ |++...+.|+|..|...|++.+++ .+++|++++....+
T Consensus 20 ~~~s~~ela~~~----gl~~stv~r~l~~L~~~G~v~~~~---~~~~Y~lg~~~~~l 69 (241)
T 2xrn_A 20 HGLSLAAIAQLV----GLPRSTVQRIINALEEEFLVEALG---PAGGFRLGPALGQL 69 (241)
T ss_dssp TCEEHHHHHHHT----TSCHHHHHHHHHHHHTTTSEEECG---GGCEEEECSHHHHH
T ss_pred CCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEEeC---CCCeEEECHHHHHH
Confidence 479999999999 999999999999999999999875 14789999855444
No 338
>2o0y_A Transcriptional regulator; ICLR-family, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.00A {Rhodococcus SP}
Probab=94.43 E-value=0.044 Score=47.84 Aligned_cols=47 Identities=11% Similarity=0.134 Sum_probs=42.4
Q ss_pred CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhc
Q 021707 17 NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIG 71 (309)
Q Consensus 17 ~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~ 71 (309)
+++.|+.|||+.+ |++.-.+.|+|..|...|++.++. +++|++++..
T Consensus 36 ~~~~~~~eia~~~----gl~kstv~r~l~tL~~~G~v~~~~----~~~Y~lg~~~ 82 (260)
T 2o0y_A 36 HPTRSLKELVEGT----KLPKTTVVRLVATMCARSVLTSRA----DGSYSLGPEM 82 (260)
T ss_dssp BSSBCHHHHHHHH----CCCHHHHHHHHHHHHHTTSEEECT----TSCEEECHHH
T ss_pred CCCcCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEECC----CCeEEecHHH
Confidence 4689999999999 999999999999999999999885 4489998854
No 339
>2f2e_A PA1607; transcription factor, helix-TRUN-helix, APC5613, structural genomics, PSI, protein structure initiative; HET: GLC; 1.85A {Pseudomonas aeruginosa} SCOP: a.4.5.69
Probab=94.41 E-value=0.041 Score=43.64 Aligned_cols=57 Identities=21% Similarity=0.254 Sum_probs=46.6
Q ss_pred CCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeeccc-ccCceEEcChhchhhhc
Q 021707 16 ANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREF-RGERKYSLTEIGKSLVT 76 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~-~~~~~y~~t~~~~~l~~ 76 (309)
.+++.+..||++.+ |+++..+.+.|+.|...|+|++.... ...-.|++|+.+..+..
T Consensus 34 ~~g~~~~~eLa~~l----gis~~tls~~L~~Le~~GlI~r~~~~~d~~~~y~LT~~G~~l~~ 91 (146)
T 2f2e_A 34 FEGLTRFGEFQKSL----GLAKNILAARLRNLVEHGVMVAVPAESGSHQEYRLTDKGRALFP 91 (146)
T ss_dssp HTTCCSHHHHHHHH----CCCHHHHHHHHHHHHHTTSEEEEECSSSSCEEEEECHHHHTTHH
T ss_pred HhCCCCHHHHHHHh----CCCHHHHHHHHHHHHHCCCEEEEecCCCCeEEEEECchHHHHHH
Confidence 36899999999999 99999999999999999999987521 00237999998866553
No 340
>1xd7_A YWNA; structural genomics, protein structure initiative, winged HE binding, hypothetical protein, PSI; 2.30A {Bacillus subtilis subsp} SCOP: a.4.5.55
Probab=94.40 E-value=0.051 Score=43.00 Aligned_cols=45 Identities=13% Similarity=0.180 Sum_probs=38.5
Q ss_pred CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcCh
Q 021707 17 NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTE 69 (309)
Q Consensus 17 ~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~ 69 (309)
.++ |.++||+.. ++++..|+++|..|...|+|....+ .|.|.+..
T Consensus 22 ~~~-s~~~IA~~~----~i~~~~l~kIl~~L~~aGlv~s~rG---~GGy~Lar 66 (145)
T 1xd7_A 22 EKT-SSEIIADSV----NTNPVVVRRMISLLKKADILTSRAG---VPGASLKK 66 (145)
T ss_dssp SCC-CHHHHHHHH----TSCHHHHHHHHHHHHHTTSEECCSS---SSSCEESS
T ss_pred CCC-CHHHHHHHH----CcCHHHHHHHHHHHHHCCceEeecC---CCCceecC
Confidence 345 999999999 9999999999999999999987752 45677765
No 341
>2qvo_A Uncharacterized protein AF_1382; PSI, structural genomics, southeast collaboratory for structural genomics; 1.85A {Archaeoglobus fulgidus dsm 4304} PDB: 3o3k_A 3ov8_A
Probab=94.39 E-value=0.036 Score=40.39 Aligned_cols=52 Identities=10% Similarity=0.111 Sum_probs=42.0
Q ss_pred CCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhc
Q 021707 20 LSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 20 ~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~ 76 (309)
+|..+||+.+ ++++..+.++++.|...|+|.... +.....|.+|+.|..+..
T Consensus 31 ~t~~eLa~~l----~i~~~tvs~~l~~Le~~Glv~~~~-d~R~~~v~LT~~G~~~~~ 82 (95)
T 2qvo_A 31 VYIQYIASKV----NSPHSYVWLIIKKFEEAKMVECEL-EGRTKIIRLTDKGQKIAQ 82 (95)
T ss_dssp EEHHHHHHHS----SSCHHHHHHHHHHHHHTTSEEEEE-ETTEEEEEECHHHHHHHH
T ss_pred cCHHHHHHHH----CcCHHHHHHHHHHHHHCcCccCCC-CCCeEEEEEChhHHHHHH
Confidence 9999999999 999999999999999999993322 111225999998876654
No 342
>3t8r_A Staphylococcus aureus CYMR; transcriptional regulator protein, dimer, sulfenic acid, UNK function; 1.70A {Staphylococcus aureus} PDB: 3t8t_A
Probab=94.36 E-value=0.04 Score=43.62 Aligned_cols=46 Identities=17% Similarity=0.145 Sum_probs=39.8
Q ss_pred CCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcCh
Q 021707 18 TPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTE 69 (309)
Q Consensus 18 ~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~ 69 (309)
++.|.++||+.. ++++..++++|..|...|+|....+ ..|.|.+..
T Consensus 27 ~~~s~~~IA~~~----~i~~~~l~kil~~L~~aGlv~s~rG--~~GGy~Lar 72 (143)
T 3t8r_A 27 GCISLKSIAEEN----NLSDLYLEQLVGPLRNAGLIRSVRG--AKGGYQLRV 72 (143)
T ss_dssp CCEEHHHHHHHT----TCCHHHHHHHHHHHHHTTSEEECSS--SSSEEEESS
T ss_pred CCcCHHHHHHHH----CcCHHHHHHHHHHHHHCCEEEecCC--CCCCeeecC
Confidence 589999999999 9999999999999999999987652 146788875
No 343
>3bdd_A Regulatory protein MARR; putative multiple antibiotic-resistance repressor, structura genomics, joint center for structural genomics, JCSG; 2.20A {Streptococcus suis}
Probab=94.35 E-value=0.07 Score=41.12 Aligned_cols=64 Identities=20% Similarity=0.176 Sum_probs=50.2
Q ss_pred hhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhh-cC
Q 021707 10 RKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLV-TD 77 (309)
Q Consensus 10 ~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~-~~ 77 (309)
++..+..+++.|..+||+.+ ++++..+.+.++.|...|++..... |...-.|.+|+.+..+. ..
T Consensus 36 iL~~l~~~~~~~~~ela~~l----~is~~~vs~~l~~L~~~gli~~~~~~~d~r~~~~~lT~~G~~~~~~~ 102 (142)
T 3bdd_A 36 ILQTLLKDAPLHQLALQERL----QIDRAAVTRHLKLLEESGYIIRKRNPDNQREVLVWPTEQAREALITN 102 (142)
T ss_dssp HHHHHHHHCSBCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEECSSSTTCEEEEECHHHHHHHTTS
T ss_pred HHHHHHhCCCCCHHHHHHHH----CCCHHHHHHHHHHHHHCCCEEecCCCCCCCeeEEEECHHHHHHHHHH
Confidence 33334345789999999999 9999999999999999999987652 11123599999998777 43
No 344
>3hsr_A HTH-type transcriptional regulator SARZ; helix-turn-helix, cysteine disulfide, MARR-family transcript regulator, DNA-binding; 1.90A {Staphylococcus aureus subsp} PDB: 3hse_A 3hrm_A 4gxo_A
Probab=94.35 E-value=0.045 Score=42.51 Aligned_cols=61 Identities=21% Similarity=0.190 Sum_probs=47.8
Q ss_pred hhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 12 KVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 12 ~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
..+..+++.|..|||+.+ ++++..+.++++.|...|+|++... |...-.+.+|+.|+.+..
T Consensus 43 ~~l~~~~~~t~~eLa~~l----~~~~~tvs~~l~~L~~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~ 105 (140)
T 3hsr_A 43 MAIENDEKLNIKKLGERV----FLDSGTLTPLLKKLEKKDYVVRTREEKDERNLQISLTEQGKAIKS 105 (140)
T ss_dssp HHSCTTCEEEHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEC-------CEEEECHHHHHTHH
T ss_pred HHHHHcCCcCHHHHHHHH----CCChhhHHHHHHHHHHCCCeEecCCCCCcceeeeeEChHHHHHHH
Confidence 334456899999999999 9999999999999999999998642 111236899998877664
No 345
>3kp7_A Transcriptional regulator TCAR; multiple drug resistance, biofilm, transcription regulation, binding, transcription regulator; 2.30A {Staphylococcus epidermidis RP62A} PDB: 3kp3_A* 3kp4_A* 3kp5_A* 3kp2_A* 3kp6_A
Probab=94.35 E-value=0.038 Score=43.45 Aligned_cols=62 Identities=15% Similarity=0.110 Sum_probs=46.5
Q ss_pred hhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeee----cccccCceEEcChhchhhhc
Q 021707 10 RKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEH----REFRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 10 ~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~----~~~~~~~~y~~t~~~~~l~~ 76 (309)
+...+ .+++.|..|||+.+ ++++..+.+.++.|...|+|.+. +.|...-.+.+|+.|..+..
T Consensus 43 iL~~l-~~~~~t~~eLa~~l----~~~~~~vs~~l~~Le~~Glv~r~~~~~~~D~R~~~~~lT~~G~~~~~ 108 (151)
T 3kp7_A 43 VLNML-SIEALTVGQITEKQ----GVNKAAVSRRVKKLLNAELVKLEKPDSNTDQRLKIIKLSNKGKKYIK 108 (151)
T ss_dssp HHHHH-HHSCBCHHHHHHHH----CSCSSHHHHHHHHHHHTTSEEC-----------CCBEECHHHHHHHH
T ss_pred HHHHH-HcCCcCHHHHHHHH----CCCHHHHHHHHHHHHHCCCEEeeCCCCCCCCCeeEEEECHhHHHHHH
Confidence 34444 67899999999999 99999999999999999999972 22211235788888876654
No 346
>2obp_A Putative DNA-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.70A {Ralstonia eutropha} SCOP: a.4.5.71
Probab=94.33 E-value=0.077 Score=39.02 Aligned_cols=57 Identities=26% Similarity=0.269 Sum_probs=46.1
Q ss_pred CCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhc
Q 021707 16 ANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~ 76 (309)
.+++.+..+||+.+ +++.-.|.|.|..|...|+|.....+.+-+...+|+.++.++.
T Consensus 33 ~g~~~s~~eLa~~l----~l~~stLsR~l~rLe~~GLV~r~~~~D~R~~v~LT~~G~~~l~ 89 (96)
T 2obp_A 33 GATPWSLPKIAKRA----QLPMSVLRRVLTQLQAAGLADVSVEADGRGHASLTQEGAALAA 89 (96)
T ss_dssp TCCCCBHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEECTTSCEEEEECHHHHHHHH
T ss_pred CCCCcCHHHHHHHh----CCchhhHHHHHHHHHHCCCEEeecCCCCceeEEECHHHHHHHH
Confidence 34789999999999 9999999999999999999998653212345788888866544
No 347
>3cdh_A Transcriptional regulator, MARR family; helix-turn-hleix, structura genomics, PSI-2, protein structure initiative; 2.69A {Silicibacter pomeroyi dss-3}
Probab=94.28 E-value=0.074 Score=41.89 Aligned_cols=63 Identities=11% Similarity=0.181 Sum_probs=48.5
Q ss_pred hhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 10 RKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 10 ~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
++..+...++.|..+||+.+ +++...+.++++.|...|+|.+... |...-.+.+|+.|..+..
T Consensus 48 iL~~l~~~~~~t~~ela~~l----~i~~~tvs~~l~~Le~~Glv~r~~~~~d~R~~~~~lT~~G~~~~~ 112 (155)
T 3cdh_A 48 VLACLVDNDAMMITRLAKLS----LMEQSRMTRIVDQMDARGLVTRVADAKDKRRVRVRLTDDGRALAE 112 (155)
T ss_dssp HHHHHSSCSCBCHHHHHHHT----TCCHHHHHHHHHHHHHTTSEEECC------CCCEEECHHHHHHHH
T ss_pred HHHHHHHCCCcCHHHHHHHH----CCCHHHHHHHHHHHHHCCCEEeccCCCcCCeeEeEECHHHHHHHH
Confidence 34444456899999999999 9999999999999999999987641 111235889998876654
No 348
>3k0l_A Repressor protein; helix-turn-helix, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.35A {Acinetobacter SP}
Probab=94.25 E-value=0.076 Score=42.32 Aligned_cols=59 Identities=15% Similarity=0.060 Sum_probs=47.7
Q ss_pred hcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 14 RLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 14 ~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
+...+++|..+||+.+ ++++..+.++++.|+..|+|++... |...-.+.+|+.|..+..
T Consensus 55 l~~~~~~t~~eLa~~l----~~~~~tvs~~l~~Le~~Glv~r~~~~~DrR~~~l~LT~~G~~~~~ 115 (162)
T 3k0l_A 55 LAAKPNLSNAKLAERS----FIKPQSANKILQDLLANGWIEKAPDPTHGRRILVTVTPSGLDKLN 115 (162)
T ss_dssp HHHCTTCCHHHHHHHH----TSCGGGHHHHHHHHHHTTSEEEEECCSSSCCEEEEECHHHHHHHH
T ss_pred HHHCCCCCHHHHHHHH----CCCHHHHHHHHHHHHHCcCeEecCCCCcCCeeEeEECHhHHHHHH
Confidence 3346899999999999 9999999999999999999998652 111235889998876664
No 349
>3bja_A Transcriptional regulator, MARR family, putative; NP_978771.1, putative MARR-like transcription regulator, MAR structural genomics; 2.38A {Bacillus cereus}
Probab=94.23 E-value=0.047 Score=42.01 Aligned_cols=59 Identities=15% Similarity=0.210 Sum_probs=46.8
Q ss_pred hcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 14 RLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 14 ~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
+..+++.|..+||+.+ ++++..+.+.++.|...|+|.+... +...-.|.+|+.+..+..
T Consensus 42 l~~~~~~~~~ela~~l----~~~~~tvs~~l~~L~~~gli~r~~~~~d~r~~~~~lT~~G~~~~~ 102 (139)
T 3bja_A 42 LAKSGKVSMSKLIENM----GCVPSNMTTMIQRMKRDGYVMTEKNPNDQRETLVYLTKKGEETKK 102 (139)
T ss_dssp HHHSCSEEHHHHHHHC----SSCCTTHHHHHHHHHHTTSEEEEECSSCTTCEEEEECHHHHHHHH
T ss_pred HHHcCCcCHHHHHHHH----CCChhHHHHHHHHHHHCCCeeeccCCCCCceeEEEECHHHHHHHH
Confidence 3346889999999999 9999999999999999999987541 111224889988876654
No 350
>1sfx_A Conserved hypothetical protein AF2008; structural genomics, HTH MOT protein structure initiative, midwest center for structural genomics; 1.55A {Archaeoglobus fulgidus} SCOP: a.4.5.50
Probab=94.23 E-value=0.033 Score=40.92 Aligned_cols=45 Identities=18% Similarity=0.122 Sum_probs=38.8
Q ss_pred hhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeec
Q 021707 9 GRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 9 g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
.++..+..+++.|..|||+.+ |+++..+.+.|+.|...|+|....
T Consensus 24 ~il~~l~~~~~~s~~ela~~l----~is~~tv~~~l~~L~~~glv~~~~ 68 (109)
T 1sfx_A 24 RIYSLLLERGGMRVSEIAREL----DLSARFVRDRLKVLLKRGFVRREI 68 (109)
T ss_dssp HHHHHHHHHCCBCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHcCCCCHHHHHHHH----CCCHHHHHHHHHHHHHCCCEEEEe
Confidence 344444456899999999999 999999999999999999998864
No 351
>3ech_A MEXR, multidrug resistance operon repressor; winged helix, helix-turn-helix, protein-peptide complex; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.28 PDB: 1lnw_A 3mex_A
Probab=94.22 E-value=0.045 Score=42.56 Aligned_cols=62 Identities=15% Similarity=0.095 Sum_probs=42.8
Q ss_pred hhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 11 KKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 11 ~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
...+...++.|..+||+.+ ++++..+.++++.|...|+|++... |...-.+.+|+.|+.+..
T Consensus 43 L~~l~~~~~~t~~eLa~~l----~~~~~tvs~~l~~L~~~Glv~r~~~~~DrR~~~~~LT~~G~~~~~ 106 (142)
T 3ech_A 43 LKLIDEQRGLNLQDLGRQM----CRDKALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGLAIHL 106 (142)
T ss_dssp HHHHHHTTTCCHHHHHHHH----C---CHHHHHHHHHHHTTSEEC----------CCEECHHHHHHHH
T ss_pred HHHHHhCCCcCHHHHHHHh----CCCHHHHHHHHHHHHHCCCEeeccCCCCCCeeeeEECHHHHHHHH
Confidence 3334456899999999999 9999999999999999999998652 111224788888876654
No 352
>4a5n_A Uncharacterized HTH-type transcriptional regulato; activator, DNA binding, MARR-like; 1.81A {Bacillus subtilis} PDB: 4a5m_A
Probab=94.22 E-value=0.079 Score=41.30 Aligned_cols=58 Identities=22% Similarity=0.256 Sum_probs=47.6
Q ss_pred CCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeeccc--ccCceEEcChhchhhhc
Q 021707 16 ANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREF--RGERKYSLTEIGKSLVT 76 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~--~~~~~y~~t~~~~~l~~ 76 (309)
..|+.+..||++.+ | |+++..|.+.|+.|...|+|++.... ...-.|++|+.|+.+..
T Consensus 36 ~~g~~rf~eL~~~l-~--gIs~~~Ls~~L~~Le~~GLV~R~~~~~d~r~v~y~LT~~G~~l~~ 95 (131)
T 4a5n_A 36 IDGKKRFNEFRRIC-P--SITQRMLTLQLRELEADGIVHREVYHQVPPKVEYSLTEFGRTLEP 95 (131)
T ss_dssp TTSCBCHHHHHHHC-T--TSCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECTTGGGGHH
T ss_pred hcCCcCHHHHHHHh-c--ccCHHHHHHHHHHHHHCCCEEEEecCCCCCeEEEEECHhHHHHHH
Confidence 37899999999998 4 88999999999999999999887521 11136999999987764
No 353
>2g7u_A Transcriptional regulator; ICLR family, structural genomics, PSI, protein structure initiative, midwest center for struc genomics; 2.30A {Rhodococcus SP}
Probab=94.14 E-value=0.072 Score=46.33 Aligned_cols=51 Identities=20% Similarity=0.181 Sum_probs=44.9
Q ss_pred CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhc
Q 021707 17 NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 17 ~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~ 76 (309)
+++.|+.|||+.+ |++...+.|+|..|...|+++++ +++|++++....+..
T Consensus 27 ~~~~~~~eia~~~----gl~~stv~r~l~~L~~~G~v~~~-----~~~Y~Lg~~~~~l~~ 77 (257)
T 2g7u_A 27 RPNPTLAELATEA----GLSRPAVRRILLTLQKLGYVAGS-----GGRWSLTPRVLSIGQ 77 (257)
T ss_dssp CSSCBHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEE-----TTEEEECGGGHHHHT
T ss_pred CCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEeC-----CCEEEEcHHHHHHHH
Confidence 4689999999999 99999999999999999999987 479999987655543
No 354
>3bj6_A Transcriptional regulator, MARR family; helix-turn-helix, trasnscription regulator, STR genomics, PSI-2, protein structure initiative; 2.01A {Silicibacter pomeroyi dss-3}
Probab=94.13 E-value=0.049 Score=42.68 Aligned_cols=59 Identities=15% Similarity=0.230 Sum_probs=47.1
Q ss_pred hcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 14 RLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 14 ~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
+...++.|..+||+.+ ++++..+.+.++.|...|+|.+... |...-.+.+|+.+..+..
T Consensus 49 l~~~~~~t~~ela~~l----~~~~~~vs~~l~~Le~~Glv~r~~~~~d~R~~~~~lT~~G~~~~~ 109 (152)
T 3bj6_A 49 LSLTPGATAPQLGAAL----QMKRQYISRILQEVQRAGLIERRTNPEHARSHRYWLTPRGEAIIT 109 (152)
T ss_dssp HHHSTTEEHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEECCSSSTTSCEEEECHHHHHHHH
T ss_pred HHhCCCCCHHHHHHHH----CCCHHHHHHHHHHHHHCCCeeecCCcccccceeeEEChhhHHHHH
Confidence 3346799999999999 9999999999999999999998642 111236889988876654
No 355
>3bpv_A Transcriptional regulator; MARR, DNA binding, transcription factor, winged helix motif, DNA-binding; 1.40A {Methanobacterium thermoautotrophicum} PDB: 3bpx_A*
Probab=94.08 E-value=0.049 Score=41.91 Aligned_cols=59 Identities=15% Similarity=0.209 Sum_probs=46.4
Q ss_pred hcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 14 RLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 14 ~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
+..+++.|..|||+.+ ++++..+.+.++.|...|+|.+... |...-.+.+|+.+..+..
T Consensus 38 l~~~~~~~~~ela~~l----~~s~~tvs~~l~~L~~~glv~~~~~~~d~R~~~~~lT~~G~~~~~ 98 (138)
T 3bpv_A 38 IHREPGIKQDELATFF----HVDKGTIARTLRRLEESGFIEREQDPENRRRYILEVTRRGEEIIP 98 (138)
T ss_dssp HHHSTTCBHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHTHH
T ss_pred HHHcCCCCHHHHHHHH----CCCHHHHHHHHHHHHHCCCEEeecCCCCceeEEeeECHhHHHHHH
Confidence 3346899999999999 9999999999999999999998541 111124788888866554
No 356
>2gxg_A 146AA long hypothetical transcriptional regulator; winged helix; 1.45A {Sulfolobus tokodaii} PDB: 2eb7_A 2yr2_A 3gez_A 3gf2_A* 3gfi_A 3gfm_A 3gfj_A 3gfl_A
Probab=94.05 E-value=0.094 Score=40.64 Aligned_cols=62 Identities=13% Similarity=0.111 Sum_probs=48.4
Q ss_pred hhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 10 RKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 10 ~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
++..+. +++.|..+||+.+ ++++..+.+.++.|...|+|.+... |...-.+.+|+.+..+..
T Consensus 42 iL~~l~-~~~~~~~ela~~l----~~s~~tvs~~l~~Le~~glv~r~~~~~d~r~~~~~lT~~G~~~~~ 105 (146)
T 2gxg_A 42 VLRATS-DGPKTMAYLANRY----FVTQSAITASVDKLEEMGLVVRVRDREDRRKILIEITEKGLETFN 105 (146)
T ss_dssp HHHHHT-TSCBCHHHHHHHT----TCCHHHHHHHHHHHHHTTSEEEEECSSCTTCEEEEECHHHHHHHH
T ss_pred HHHHHh-cCCcCHHHHHHHh----CCCchhHHHHHHHHHHCCCEEeecCCCCCceEEEEECHHHHHHHH
Confidence 344444 7899999999999 9999999999999999999987642 111224888988876654
No 357
>3g3z_A NMB1585, transcriptional regulator, MARR family; transcription factor, structur genomics, oxford protein production facility; 2.10A {Neisseria meningitidis serogroup B}
Probab=94.01 E-value=0.054 Score=42.20 Aligned_cols=59 Identities=19% Similarity=0.156 Sum_probs=47.5
Q ss_pred hcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 14 RLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 14 ~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
+...++.|..+||+.+ ++++..+.++++.|...|+|.+... |...-.+.+|+.|..+..
T Consensus 40 l~~~~~~t~~eLa~~l----~~~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~ 100 (145)
T 3g3z_A 40 LATEGSRTQKHIGEKW----SLPKQTVSGVCKTLAGQGLIEWQEGEQDRRKRLLSLTETGKAYAA 100 (145)
T ss_dssp HHHHCSBCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEECCCSSCGGGSCEEECHHHHHHHH
T ss_pred HHHCCCCCHHHHHHHH----CCCHHHHHHHHHHHHHCCCEeeccCCCCCceeeeeEChhHHHHHH
Confidence 3345789999999999 9999999999999999999997542 111235999999877654
No 358
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=93.93 E-value=0.022 Score=64.65 Aligned_cols=97 Identities=22% Similarity=0.150 Sum_probs=46.5
Q ss_pred cceEEEecCCccHHHHHHHHhcCC-----CceEEEeec-hhHHhhCCCC---CCceEEeCCCCCC---CCC-Cceeeehh
Q 021707 161 VKRLVDVGGSAGDCLRMILQKHHF-----ICEGINFDL-PEVVGEAPSI---PGVTHIGGDMFNS---IPA-ANAIFMKW 227 (309)
Q Consensus 161 ~~~vlDvG~G~G~~~~~l~~~~p~-----~~~~~~~D~-p~~~~~a~~~---~ri~~~~~d~~~~---~p~-~D~i~~~~ 227 (309)
..+||+||+|+|.....+++...+ .+ .+.-|. +...+.+++. -.++....|...+ .+. .|+|+.++
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~-yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~ 1319 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLD-YTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNC 1319 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEE-EEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEEC
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccce-EEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEcc
Confidence 468999999999877666655432 13 566676 4455555543 1222222233222 122 49999999
Q ss_pred hhhcCChhHHHHHHHHHHHhcCCCcEEEEeccc
Q 021707 228 VLATWTDDECKLIMENCYKALLAGGKLIACEPV 260 (309)
Q Consensus 228 vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~ 260 (309)
+||.-++. .+.|+++++.|+|||++++.|..
T Consensus 1320 vl~~t~~~--~~~l~~~~~lL~p~G~l~~~e~~ 1350 (2512)
T 2vz8_A 1320 ALATLGDP--AVAVGNMAATLKEGGFLLLHTLL 1350 (2512)
T ss_dssp C----------------------CCEEEEEEC-
T ss_pred cccccccH--HHHHHHHHHhcCCCcEEEEEecc
Confidence 99965544 47899999999999999998753
No 359
>3k69_A Putative transcription regulator; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.95A {Lactobacillus plantarum} SCOP: a.4.5.0
Probab=93.92 E-value=0.078 Score=42.89 Aligned_cols=48 Identities=13% Similarity=0.200 Sum_probs=40.9
Q ss_pred CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChh
Q 021707 17 NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEI 70 (309)
Q Consensus 17 ~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~ 70 (309)
+++.|.++||+.. ++++..++++|..|...|+|+...+ ..|.|++...
T Consensus 26 ~~~~s~~~IA~~~----~is~~~l~kil~~L~~aGlv~s~rG--~~GGy~Lar~ 73 (162)
T 3k69_A 26 DSKVASRELAQSL----HLNPVMIRNILSVLHKHGYLTGTVG--KNGGYQLDLA 73 (162)
T ss_dssp TSCBCHHHHHHHH----TSCGGGTHHHHHHHHHTTSSEEECS--TTCEEECCSC
T ss_pred CCCcCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEeecC--CCCCeEecCC
Confidence 5689999999999 9999999999999999999977652 1457888753
No 360
>2fbh_A Transcriptional regulator PA3341; MARR, transcription regulator, APC5857, structural genomics, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=93.91 E-value=0.11 Score=40.27 Aligned_cols=58 Identities=17% Similarity=0.192 Sum_probs=46.6
Q ss_pred cCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 15 LANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 15 l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
..+++.|..+||+.+ ++++..+.+.++.|...|+|.+... |...-.+.+|+.+..+..
T Consensus 48 ~~~~~~t~~~la~~l----~~s~~~vs~~l~~L~~~glv~r~~~~~d~R~~~~~lT~~G~~~~~ 107 (146)
T 2fbh_A 48 RHRDSPTQRELAQSV----GVEGPTLARLLDGLESQGLVRRLAVAEDRRAKHIVLTPKADVLIA 107 (146)
T ss_dssp HCSSCCBHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEECCBTTBCSCEEEECTTHHHHHH
T ss_pred HcCCCCCHHHHHHHh----CCChhhHHHHHHHHHHCCCeeecCCCcccCeeeeEECHhHHHHHH
Confidence 357899999999999 9999999999999999999988642 111234888888766554
No 361
>3nrv_A Putative transcriptional regulator (MARR/EMRR FAM; PSI-2, protein structure initiati structural genomics; HET: MSE; 2.00A {Acinetobacter SP}
Probab=93.90 E-value=0.057 Score=42.17 Aligned_cols=61 Identities=20% Similarity=0.201 Sum_probs=45.7
Q ss_pred hhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 12 KVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 12 ~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
..+...++.|..+||+.+ ++++..+.+.++.|...|+|.+... |...-.+.+|+.|..+..
T Consensus 47 ~~l~~~~~~t~~ela~~l----~~~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~lT~~G~~~~~ 109 (148)
T 3nrv_A 47 SVLSSASDCSVQKISDIL----GLDKAAVSRTVKKLEEKKYIEVNGHSEDKRTYAINLTEMGQELYE 109 (148)
T ss_dssp HHHHHSSSBCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEC---------CCBEECHHHHHHHH
T ss_pred HHHHcCCCCCHHHHHHHH----CCCHHHHHHHHHHHHHCCCEEeecCCCCcceeEeEECHhHHHHHH
Confidence 333356799999999999 9999999999999999999987642 111245888888866554
No 362
>2hzt_A Putative HTH-type transcriptional regulator YTCD; DNA-binding protein, HTH-type transcription regulators, structural genomics, PSI-2; HET: CSU MSE; 2.00A {Bacillus subtilis} SCOP: a.4.5.69
Probab=93.87 E-value=0.12 Score=38.51 Aligned_cols=57 Identities=25% Similarity=0.256 Sum_probs=45.5
Q ss_pred CCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeeccc--ccCceEEcChhchhhh
Q 021707 16 ANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREF--RGERKYSLTEIGKSLV 75 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~--~~~~~y~~t~~~~~l~ 75 (309)
.+++.+..||++.+ + |+++..+.+.|+.|...|+|++.... ...-.|++|+.+..+.
T Consensus 24 ~~~~~~~~eLa~~l-~--~is~~tls~~L~~Le~~GlI~r~~~~~d~r~~~y~LT~~G~~l~ 82 (107)
T 2hzt_A 24 THGKKRTSELKRLM-P--NITQKMLTQQLRELEADGVINRIVYNQVPPKVEYELSEYGRSLE 82 (107)
T ss_dssp TTCCBCHHHHHHHC-T--TSCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECTTGGGGH
T ss_pred HhCCCCHHHHHHHh-c--CCCHHHHHHHHHHHHHCCCEEEeecCCCCCeEEEEECccHHHHH
Confidence 47899999999996 3 88999999999999999999876521 1113599999886554
No 363
>3oop_A LIN2960 protein; protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG, unknown function; 1.78A {Listeria innocua}
Probab=93.87 E-value=0.049 Score=42.35 Aligned_cols=57 Identities=25% Similarity=0.248 Sum_probs=46.3
Q ss_pred CCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 16 ANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
..++.|..|||+.+ ++++..+.++++.|...|+|++... |...-.+.+|+.|..+..
T Consensus 48 ~~~~~t~~eLa~~l----~~~~~~vs~~l~~L~~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~ 106 (143)
T 3oop_A 48 ANEPISQKEIALWT----KKDTPTVNRIVDVLLRKELIVREISTEDRRISLLSLTDKGRKETT 106 (143)
T ss_dssp HHSSEEHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEC----CCSCEEEECHHHHHHHH
T ss_pred HcCCcCHHHHHHHH----CCCHhhHHHHHHHHHHCCCeeccCCCccCceeeeeECHHHHHHHH
Confidence 45899999999999 9999999999999999999987642 111235889998876654
No 364
>2a61_A Transcriptional regulator TM0710; APC4350, MCSG, midwest center for structural genomics, PSI, protein structure initiative, MARR; 1.80A {Thermotoga maritima} SCOP: a.4.5.28
Probab=93.83 E-value=0.056 Score=41.96 Aligned_cols=57 Identities=12% Similarity=0.212 Sum_probs=46.1
Q ss_pred CCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 16 ANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
.+++.|..+||+.+ ++++..+.+.++.|...|+|..... +...-.|.+|+.+..+..
T Consensus 44 ~~~~~~~~~la~~l----~~s~~tvs~~l~~L~~~glv~r~~~~~d~r~~~~~lT~~G~~~~~ 102 (145)
T 2a61_A 44 FEGPKRPGELSVLL----GVAKSTVTGLVKRLEADGYLTRTPDPADRRAYFLVITRKGEEVIE 102 (145)
T ss_dssp HHCCBCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred HcCCCCHHHHHHHH----CCCchhHHHHHHHHHHCCCeeecCCCCCCceEEEEECHHHHHHHH
Confidence 46789999999999 9999999999999999999988641 111125889998876654
No 365
>1jgs_A Multiple antibiotic resistance protein MARR; transcription regulation, DNA-binding, repressor, transcription; HET: SAL; 2.30A {Escherichia coli} SCOP: a.4.5.28
Probab=93.82 E-value=0.059 Score=41.45 Aligned_cols=57 Identities=14% Similarity=0.106 Sum_probs=46.1
Q ss_pred CCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 16 ANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
.+++.|..+||+.+ ++++..+.+.++.|...|+|.+... |...-.+.+|+.|..+..
T Consensus 45 ~~~~~~~~~la~~l----~~~~~tvs~~l~~L~~~gli~r~~~~~d~R~~~~~lT~~G~~~~~ 103 (138)
T 1jgs_A 45 CAACITPVELKKVL----SVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTGGAAICE 103 (138)
T ss_dssp HHSSBCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEECTTCSSCEEEEECHHHHHHHH
T ss_pred hcCCCCHHHHHHHH----CCChHHHHHHHHHHHHCCCEEecCCcccCceeEeEEChhHHHHHH
Confidence 45789999999999 9999999999999999999988642 111224889998876654
No 366
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=93.82 E-value=0.057 Score=47.94 Aligned_cols=92 Identities=17% Similarity=0.168 Sum_probs=59.2
Q ss_pred CCCcceEEEecC------CccHHHHHHHHhcCC-CceEEEeechhHHhhCCCCCCceEEeCCCCCC-CCC-Cceeee---
Q 021707 158 FKGVKRLVDVGG------SAGDCLRMILQKHHF-ICEGINFDLPEVVGEAPSIPGVTHIGGDMFNS-IPA-ANAIFM--- 225 (309)
Q Consensus 158 ~~~~~~vlDvG~------G~G~~~~~l~~~~p~-~~~~~~~D~p~~~~~a~~~~ri~~~~~d~~~~-~p~-~D~i~~--- 225 (309)
.+.+.+|||+|+ -.|.+ .+.+..|. .. ++..|+.++...+ . .++.||..+. ... .|+|+.
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~-VVavDL~~~~sda----~-~~IqGD~~~~~~~~k~DLVISDMA 178 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTL-LVDSDLNDFVSDA----D-STLIGDCATVHTANKWDLIISDMY 178 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCE-EEEEESSCCBCSS----S-EEEESCGGGEEESSCEEEEEECCC
T ss_pred ecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcE-EEEeeCcccccCC----C-eEEEccccccccCCCCCEEEecCC
Confidence 456789999996 66773 44556786 57 9999986554322 2 4488887554 222 488873
Q ss_pred ----hhhhhcC--ChhHHHHHHHHHHHhcCCCcEEEEe
Q 021707 226 ----KWVLATW--TDDECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 226 ----~~vlh~~--~d~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
.++-++- ...-+..+|.=+.+.|+|||.+++-
T Consensus 179 PNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVK 216 (344)
T 3r24_A 179 DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 216 (344)
T ss_dssp CTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEE
Confidence 1111111 1224667788888999999988876
No 367
>2pex_A Transcriptional regulator OHRR; transcription regulator; 1.90A {Xanthomonas campestris} PDB: 2pfb_A
Probab=93.81 E-value=0.062 Score=42.24 Aligned_cols=62 Identities=26% Similarity=0.251 Sum_probs=48.2
Q ss_pred hhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhcC
Q 021707 12 KVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVTD 77 (309)
Q Consensus 12 ~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~~ 77 (309)
..+..++++|..+||+.+ +++...+.+.++.|...|+|.+... +...-.+.+|+.+..+...
T Consensus 54 ~~l~~~~~~t~~ela~~l----~~s~~tvs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~~~ 117 (153)
T 2pex_A 54 LVLWETDERSVSEIGERL----YLDSATLTPLLKRLQAAGLVTRTRAASDERQVIIALTETGRALRSK 117 (153)
T ss_dssp HHHHHSCSEEHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEC-------CEEEECHHHHHGGGG
T ss_pred HHHHhCCCcCHHHHHHHh----CCCcccHHHHHHHHHHCCCEeecCCcccCCeeEeeECHHHHHHHHH
Confidence 333346889999999999 9999999999999999999988641 1112358999999877654
No 368
>1yyv_A Putative transcriptional regulator; reductive methylation, D lysine, structural genomics, PSI; HET: MLY; 2.35A {Salmonella typhimurium} SCOP: a.4.5.69
Probab=93.80 E-value=0.048 Score=42.45 Aligned_cols=57 Identities=19% Similarity=0.222 Sum_probs=46.4
Q ss_pred CCCCCCHHHHHHHhCcCCC-CCcchHHHHHHHHHcCCceeeeccc--ccCceEEcChhchhhhc
Q 021707 16 ANTPLSVSQILTCILPSGG-GDAENLQCILRLLTSYGVFSEHREF--RGERKYSLTEIGKSLVT 76 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~~~g-~~~~~l~rlL~~L~~~gll~~~~~~--~~~~~y~~t~~~~~l~~ 76 (309)
.+++.+..||++.+ + +++..+.+.|+.|...|+|++.... ...-.|++|+.+..+..
T Consensus 45 ~~g~~~~~eLa~~l----~gis~~tls~~L~~Le~~GlV~r~~~~~d~r~~~y~LT~~G~~l~~ 104 (131)
T 1yyv_A 45 RDGTHRFSDLRRXM----GGVSEXMLAQSLQALEQDGFLNRVSYPVVPPHVEYSLTPLGEQVSD 104 (131)
T ss_dssp GGCCEEHHHHHHHS----TTCCHHHHHHHHHHHHHHTCEEEEEECSSSCEEEEEECHHHHHHHH
T ss_pred HcCCCCHHHHHHHh----ccCCHHHHHHHHHHHHHCCcEEEEecCCCCCeEEEEECccHHHHHH
Confidence 37899999999998 6 9999999999999999999876521 11136999999876653
No 369
>3df8_A Possible HXLR family transcriptional factor; APC89000, structural genomics, midwest center for structural genomics, MCSG; 1.65A {Thermoplasma volcanium} SCOP: a.4.5.0
Probab=93.78 E-value=0.11 Score=39.16 Aligned_cols=56 Identities=23% Similarity=0.306 Sum_probs=46.6
Q ss_pred CCCCCC--HHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhc
Q 021707 16 ANTPLS--VSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 16 ~~~~~t--~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~ 76 (309)
.+|+.+ +.||++.+ | |+++..+.+.|+.|...|+|++... ....|++|+.|+.+..
T Consensus 37 ~~g~~~~~~~eL~~~l-~--gis~~~ls~~L~~Le~~GlV~r~~~--r~~~y~LT~~G~~l~~ 94 (111)
T 3df8_A 37 GNGSTRQNFNDIRSSI-P--GISSTILSRRIKDLIDSGLVERRSG--QITTYALTEKGMNVRN 94 (111)
T ss_dssp TSSSSCBCHHHHHHTS-T--TCCHHHHHHHHHHHHHTTSEEEEES--SSEEEEECHHHHHHHH
T ss_pred hcCCCCCCHHHHHHHc-c--CCCHHHHHHHHHHHHHCCCEEEeec--CcEEEEECccHHHHHH
Confidence 478888 99999998 3 5999999999999999999998742 1357999999876654
No 370
>2nnn_A Probable transcriptional regulator; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=93.75 E-value=0.057 Score=41.56 Aligned_cols=62 Identities=15% Similarity=0.110 Sum_probs=47.5
Q ss_pred hhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 11 KKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 11 ~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
+..+...++.|..+||+.+ ++++..+.+.++.|...|+|..... |...-.|.+|+.+..+..
T Consensus 44 L~~l~~~~~~t~~ela~~l----~~~~~tvs~~l~~L~~~glv~r~~~~~d~R~~~~~lT~~G~~~~~ 107 (140)
T 2nnn_A 44 LVRLGETGPCPQNQLGRLT----AMDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAELE 107 (140)
T ss_dssp HHHHHHHSSBCHHHHHHHT----TCCHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred HHHHHHcCCCCHHHHHHHH----CCCHHHHHHHHHHHHHCCCEEeeCCCCCCCeeeeEECHhHHHHHH
Confidence 3333345799999999999 9999999999999999999988641 111124889988876654
No 371
>2qww_A Transcriptional regulator, MARR family; YP_013417.1, multiple antibiotic-resistance repressor (MARR) structural genomics; HET: MSE; 2.07A {Listeria monocytogenes str}
Probab=93.70 E-value=0.069 Score=41.97 Aligned_cols=59 Identities=14% Similarity=0.097 Sum_probs=46.3
Q ss_pred hcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceee--ecc--cccCceEEcChhchhhhc
Q 021707 14 RLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSE--HRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 14 ~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~--~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
+...+++|..+||+.+ ++++..+.++++.|...|+|.+ ... |...-.+.+|+.+..+..
T Consensus 50 l~~~~~~t~~eLa~~l----~~~~~tvs~~l~~Le~~Glv~r~~~~~~~d~R~~~~~LT~~G~~~~~ 112 (154)
T 2qww_A 50 IYSTPGISVADLTKRL----IITGSSAAANVDGLISLGLVVKLNKTIPNDSMDLTLKLSKKGEDLSK 112 (154)
T ss_dssp HHHSTTEEHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEESCC--CTTCTTCEEEECHHHHHHHH
T ss_pred HHHCCCCCHHHHHHHH----CCCHHHHHHHHHHHHHCCCEEecCcCCCCCCceeEeEECHHHHHHHH
Confidence 3346789999999999 9999999999999999999998 431 111235899998876654
No 372
>3tgn_A ADC operon repressor ADCR; helix-turn-helix, transcriptional regulator, transcription; 2.00A {Streptococcus pneumoniae}
Probab=93.69 E-value=0.099 Score=40.57 Aligned_cols=62 Identities=11% Similarity=0.171 Sum_probs=44.9
Q ss_pred hhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 10 RKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 10 ~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
+...+..++ .|..|||+.+ ++++..+.+.++.|...|+|.+... |...-.+.+|+.+..+..
T Consensus 43 iL~~l~~~~-~t~~eLa~~l----~~s~~tvs~~l~~L~~~Glv~r~~~~~d~R~~~~~lT~~g~~~~~ 106 (146)
T 3tgn_A 43 ILMLLSEES-LTNSELARRL----NVSQAAVTKAIKSLVKEGMLETSKDSKDARVIFYQLTDLARPIAE 106 (146)
T ss_dssp HHHHHTTCC-CCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEC----------CCEECGGGHHHHH
T ss_pred HHHHHHhCC-CCHHHHHHHH----CCCHHHHHHHHHHHHHCCCeEeccCCCCCceeEEEECHhHHHHHH
Confidence 334343445 9999999999 9999999999999999999987642 111245888888866554
No 373
>2hr3_A Probable transcriptional regulator; MCSG, structural genomics, PSI-2, protein structure initiati midwest center for structural genomics; 2.40A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=93.67 E-value=0.077 Score=41.28 Aligned_cols=56 Identities=20% Similarity=0.242 Sum_probs=45.5
Q ss_pred CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 17 NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 17 ~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
+++.|..+||+.+ ++++..+.+.++.|...|+|.+... |...-.+.+|+.|..+..
T Consensus 48 ~~~~~~~~la~~l----~i~~~~vs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~~ 105 (147)
T 2hr3_A 48 GGDVTPSELAAAE----RMRSSNLAALLRELERGGLIVRHADPQDGRRTRVSLSSEGRRNLY 105 (147)
T ss_dssp TSCBCHHHHHHHT----TCCHHHHHHHHHHHHHTTSEEEEC------CCEEEECHHHHHHHH
T ss_pred CCCCCHHHHHHHh----CCChhhHHHHHHHHHHCCCEeeCCCCCCCCceeeEECHHHHHHHH
Confidence 7899999999999 9999999999999999999988642 111234889998876654
No 374
>2ia2_A Putative transcriptional regulator; SAD, PSI-2, structural genomics, structure initiative, midwest center for structural genomic transcription; 2.10A {Rhodococcus SP}
Probab=93.59 E-value=0.064 Score=46.88 Aligned_cols=46 Identities=15% Similarity=0.117 Sum_probs=42.0
Q ss_pred CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhc
Q 021707 17 NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIG 71 (309)
Q Consensus 17 ~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~ 71 (309)
.++.|+.|||+.+ |++.-.+.|+|..|...|+++++ +++|++++..
T Consensus 34 ~~~~~~~eia~~~----gl~~stv~r~l~tL~~~G~v~~~-----~~~Y~Lg~~~ 79 (265)
T 2ia2_A 34 NQRRTLSDVARAT----DLTRATARRFLLTLVELGYVATD-----GSAFWLTPRV 79 (265)
T ss_dssp CSSEEHHHHHHHH----TCCHHHHHHHHHHHHHHTSEEES-----SSEEEECGGG
T ss_pred CCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEec-----CCEEEEcHHH
Confidence 4689999999999 99999999999999999999987 4789998854
No 375
>2bv6_A MGRA, HTH-type transcriptional regulator MGRA; multidrug resistance regulator, virulence determinant, transcriptional factors; 2.8A {Staphylococcus aureus} SCOP: a.4.5.28
Probab=93.52 E-value=0.07 Score=41.31 Aligned_cols=61 Identities=15% Similarity=0.260 Sum_probs=47.5
Q ss_pred hhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 12 KVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 12 ~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
..+...++.|..+||+.+ ++++..+.+.++.|...|+|.+... |...-.+.+|+.+..+..
T Consensus 44 ~~l~~~~~~~~~ela~~l----~~~~~tvs~~l~~L~~~gli~r~~~~~d~R~~~~~lT~~G~~~~~ 106 (142)
T 2bv6_A 44 TILWDESPVNVKKVVTEL----ALDTGTVSPLLKRMEQVDLIKRERSEVDQREVFIHLTDKSETIRP 106 (142)
T ss_dssp HHHHHSSEEEHHHHHHHT----TCCTTTHHHHHHHHHHTTSEEEEECSSSTTCEEEEECHHHHHHHH
T ss_pred HHHHHcCCcCHHHHHHHH----CCChhhHHHHHHHHHHCCCEEeecCCCCcceEEEEEChHHHHHHH
Confidence 333346789999999999 9999999999999999999988652 111225888988866554
No 376
>3s2w_A Transcriptional regulator, MARR family; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 2.45A {Methanosarcina mazei}
Probab=93.52 E-value=0.073 Score=42.21 Aligned_cols=59 Identities=19% Similarity=0.162 Sum_probs=46.9
Q ss_pred hcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 14 RLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 14 ~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
+..++++|..|||+.+ ++++..+.++++.|+..|+|++... |...-.+.+|+.|..+..
T Consensus 59 l~~~~~~t~~eLa~~l----~~~~~tvs~~l~~Le~~Glv~r~~~~~DrR~~~l~LT~~G~~~~~ 119 (159)
T 3s2w_A 59 LYREDGINQESLSDYL----KIDKGTTARAIQKLVDEGYVFRQRDEKDRRSYRVFLTEKGKKLEP 119 (159)
T ss_dssp HHHSCSEEHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEECC---CCEEEEECHHHHHHHH
T ss_pred HHHCCCCCHHHHHHHH----CCCHHHHHHHHHHHHHCCCEEEecCCCCCCeeEEEECHHHHHHHH
Confidence 3346889999999999 9999999999999999999987652 111235889998876654
No 377
>2fa5_A Transcriptional regulator MARR/EMRR family; multiple antibiotics resistance repressor, XCC structural genomics, X-RAY diffraction; 1.80A {Xanthomonas campestris}
Probab=93.47 E-value=0.074 Score=42.19 Aligned_cols=59 Identities=14% Similarity=0.086 Sum_probs=44.9
Q ss_pred hcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 14 RLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 14 ~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
+..+++.|..+||+.+ +++...+.+.++.|...|+|.+... +...-.|.+|+.+..+..
T Consensus 58 l~~~~~~t~~ela~~l----~is~~tvs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~~ 118 (162)
T 2fa5_A 58 LALYPGSSASEVSDRT----AMDKVAVSRAVARLLERGFIRRETHGDDRRRSMLALSPAGRQVYE 118 (162)
T ss_dssp HHHSTTCCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEC---------CCCEECHHHHHHHH
T ss_pred HHhCCCCCHHHHHHHH----CCCHHHHHHHHHHHHHCCCEeeecCCCCCCeeEEEECHHHHHHHH
Confidence 3346899999999999 9999999999999999999987541 111235888888876654
No 378
>1lj9_A Transcriptional regulator SLYA; HTH DNA binding protein, structural genomics, PSI, protein structure initiative; 1.60A {Enterococcus faecalis} SCOP: a.4.5.28
Probab=93.39 E-value=0.077 Score=41.12 Aligned_cols=62 Identities=16% Similarity=0.132 Sum_probs=47.9
Q ss_pred hhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 11 KKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 11 ~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
+..+...++.|..+||+.+ ++++..+.+.++.|...|+|..... |...-.+.+|+.+..+..
T Consensus 35 L~~l~~~~~~t~~~la~~l----~~s~~~vs~~l~~Le~~gli~r~~~~~d~R~~~~~lT~~G~~~~~ 98 (144)
T 1lj9_A 35 LVRVCENPGIIQEKIAELI----KVDRTTAARAIKRLEEQGFIYRQEDASNKKIKRIYATEKGKNVYP 98 (144)
T ss_dssp HHHHHHSTTEEHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEECSSCTTCEEEEECHHHHHHHH
T ss_pred HHHHHHCcCcCHHHHHHHH----CCCHhHHHHHHHHHHHCCCEEeecCCCCCceeeeEEChhHHHHHH
Confidence 3333346789999999999 9999999999999999999988642 111224889988876654
No 379
>1r1t_A Transcriptional repressor SMTB; zinc, transcriptional regulation, winged HTH protein, DNA binding, transcription repressor; 1.70A {Synechococcus elongatus pcc 7942} SCOP: a.4.5.5 PDB: 1r23_A 1smt_A 1r22_A
Probab=93.37 E-value=0.12 Score=39.58 Aligned_cols=57 Identities=21% Similarity=0.215 Sum_probs=44.3
Q ss_pred hhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChh
Q 021707 8 DGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEI 70 (309)
Q Consensus 8 ~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~ 70 (309)
+.++..+ .+++.++.|||+.+ |+++..+.+.|+.|...|++.....+. .-.|++++.
T Consensus 49 l~IL~~L-~~~~~s~~ela~~l----gis~stvs~~L~~Le~~Glv~~~~~gr-~~~y~l~~~ 105 (122)
T 1r1t_A 49 LRLLSLL-ARSELCVGDLAQAI----GVSESAVSHQLRSLRNLRLVSYRKQGR-HVYYQLQDH 105 (122)
T ss_dssp HHHHHHH-TTCCBCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEEETT-EEEEEESSH
T ss_pred HHHHHHH-HcCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCeEEEEeCC-EEEEEEChH
Confidence 4455544 46899999999999 999999999999999999998765211 125777753
No 380
>2fu4_A Ferric uptake regulation protein; DNA binding domain, helix-turn-helix, DNA binding protein; 1.80A {Escherichia coli}
Probab=93.26 E-value=0.087 Score=37.12 Aligned_cols=53 Identities=13% Similarity=0.127 Sum_probs=41.1
Q ss_pred hhhhhhhhhhcCC--CCCCHHHHHHHhCcCC-CCCcchHHHHHHHHHcCCceeeec
Q 021707 5 ECRDGRKKVRLAN--TPLSVSQILTCILPSG-GGDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 5 ~~~~g~~~~~l~~--~~~t~~eLA~~~~~~~-g~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
.-+..+++.+... ++.|++||++.+.... +++...+.|.|+.|+..|+|.+..
T Consensus 17 ~~r~~IL~~l~~~~~~~~s~~el~~~l~~~~~~is~~TVyR~L~~L~~~Glv~~~~ 72 (83)
T 2fu4_A 17 LPRLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLNQFDDAGIVTRHN 72 (83)
T ss_dssp HHHHHHHHHHTSGGGSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCCeEEEe
Confidence 3445667766554 6999999999982111 578899999999999999998865
No 381
>2zkz_A Transcriptional repressor PAGR; protein-DNA, HTH motif, dimer, DN binding, transcription regulation; 2.00A {Bacillus anthracis}
Probab=93.24 E-value=0.041 Score=40.48 Aligned_cols=60 Identities=18% Similarity=0.122 Sum_probs=46.2
Q ss_pred hhhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhc
Q 021707 6 CRDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIG 71 (309)
Q Consensus 6 ~~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~ 71 (309)
.++.++..++.+++.|+.|||+.+ |+++..+.+-|+.|... ++.....+. .-.|++++..
T Consensus 28 ~Rl~IL~~l~~~~~~~~~ela~~l----~is~stvs~hL~~L~~~-lv~~~~~gr-~~~y~l~~~~ 87 (99)
T 2zkz_A 28 MRLKIVNELYKHKALNVTQIIQIL----KLPQSTVSQHLCKMRGK-VLKRNRQGL-EIYYSINNPK 87 (99)
T ss_dssp HHHHHHHHHHHHSCEEHHHHHHHH----TCCHHHHHHHHHHHBTT-TBEEEEETT-EEEEECCCHH
T ss_pred HHHHHHHHHHHCCCcCHHHHHHHH----CcCHHHHHHHHHHHHHH-hhhheEeCc-EEEEEEChHH
Confidence 345566555567899999999999 99999999999999999 998665221 2357777644
No 382
>1bja_A Transcription regulatory protein MOTA; activation domain, middle mode transcription, alpha helical structure, transcription regulation; 2.19A {Enterobacteria phage T4} SCOP: a.4.5.9 PDB: 1i1s_A
Probab=93.22 E-value=0.11 Score=38.03 Aligned_cols=53 Identities=6% Similarity=0.136 Sum_probs=45.6
Q ss_pred CCCCCCHHHHHH-HhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhcC
Q 021707 16 ANTPLSVSQILT-CILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVTD 77 (309)
Q Consensus 16 ~~~~~t~~eLA~-~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~~ 77 (309)
.+++.|..+||+ .. +++.-.+.|-++.|...|+|+..+ +| +.+|+.+..++..
T Consensus 27 ~~~~~t~~~Lae~~l----~~drstvsrnl~~L~r~GlVe~~~----~D-l~LT~~G~~~l~~ 80 (95)
T 1bja_A 27 KKDFITAAEVREVHP----DLGNAVVNSNIGVLIKKGLVEKSG----DG-LIITGEAQDIISN 80 (95)
T ss_dssp HSTTBCHHHHHHTCT----TSCHHHHHHHHHHHHTTTSEEEET----TE-EEECHHHHHHHHH
T ss_pred HCCCCCHHHHHHHHh----cccHHHHHHHHHHHHHCCCeecCC----CC-eeeCHhHHHHHHH
Confidence 467999999999 99 999999999999999999999333 44 9999999877654
No 383
>3cjn_A Transcriptional regulator, MARR family; silicibacter pomeroy structural genomics, PSI-2, protein structure initiative; 1.95A {Silicibacter pomeroyi dss-3}
Probab=93.20 E-value=0.078 Score=42.08 Aligned_cols=61 Identities=15% Similarity=0.140 Sum_probs=47.7
Q ss_pred hhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 12 KVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 12 ~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
..+...++.|..+||+.+ +++...+.++++.|...|+|.+... +...-.|.+|+.+..+..
T Consensus 59 ~~l~~~~~~t~~ela~~l----~is~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~~~lT~~G~~~~~ 121 (162)
T 3cjn_A 59 AILSAKDGLPIGTLGIFA----VVEQSTLSRALDGLQADGLVRREVDSDDQRSSRVYLTPAGRAVYD 121 (162)
T ss_dssp HHHHHSCSEEHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEEC--CCSSEEEEECHHHHHHHH
T ss_pred HHHHHCCCCCHHHHHHHH----CCChhHHHHHHHHHHHCCCEEecCCCCCCCeeEEEECHHHHHHHH
Confidence 333346899999999999 9999999999999999999988641 111235889988876554
No 384
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.18 E-value=0.065 Score=47.62 Aligned_cols=50 Identities=12% Similarity=0.076 Sum_probs=36.9
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS 202 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~ 202 (309)
...++..+. .....|||++||+|..+.++++.. .+ ++++|+ +.+++.+++
T Consensus 225 ~~~~i~~~~--~~~~~vlD~f~GsGt~~~~a~~~g--~~-~~g~e~~~~~~~~a~~ 275 (297)
T 2zig_A 225 AERLVRMFS--FVGDVVLDPFAGTGTTLIAAARWG--RR-ALGVELVPRYAQLAKE 275 (297)
T ss_dssp HHHHHHHHC--CTTCEEEETTCTTTHHHHHHHHTT--CE-EEEEESCHHHHHHHHH
T ss_pred HHHHHHHhC--CCCCEEEECCCCCCHHHHHHHHcC--Ce-EEEEeCCHHHHHHHHH
Confidence 344555442 346799999999999999988764 46 999998 666666553
No 385
>3bro_A Transcriptional regulator; helix_TURN_helix, multiple antibiotic resistance protein (MA structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.04A {Oenococcus oeni} SCOP: a.4.5.28
Probab=93.16 E-value=0.12 Score=39.84 Aligned_cols=54 Identities=9% Similarity=0.048 Sum_probs=43.9
Q ss_pred CCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 19 PLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 19 ~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
+.|..+||+.+ ++++..+.+.++.|...|+|.+... |...-.+.+|+.+..+..
T Consensus 50 ~~~~~ela~~l----~~~~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~i~lT~~G~~~~~ 105 (141)
T 3bro_A 50 EVLQRDLESEF----SIKSSTATVLLQRMEIKKLLYRKVSGKDSRQKCLKLTKKANKLET 105 (141)
T ss_dssp CCBHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEECHHHHTTHH
T ss_pred CcCHHHHHHHH----CCCcchHHHHHHHHHHCCCEEeeCCCcCCCeeeeEECHHHHHHHH
Confidence 89999999999 9999999999999999999987642 111225888988865554
No 386
>2jt1_A PEFI protein; solution structure, winged helix-turn-helix, transcripti regulatory protein, structural genomics, PSI-2; NMR {Salmonella typhimurium LT2}
Probab=93.10 E-value=0.084 Score=37.14 Aligned_cols=36 Identities=19% Similarity=0.297 Sum_probs=34.5
Q ss_pred CCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeec
Q 021707 18 TPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 18 ~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
+|.|+.|||+.+ |+++..+++-|..|...|++....
T Consensus 23 ~~psv~EIa~~l----gvS~~TVrr~L~~Le~kG~I~R~~ 58 (77)
T 2jt1_A 23 APVKTRDIADAA----GLSIYQVRLYLEQLHDVGVLEKVN 58 (77)
T ss_dssp SCEEHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEES
T ss_pred CCcCHHHHHHHH----CCCHHHHHHHHHHHHHCCcEEecC
Confidence 799999999999 999999999999999999999885
No 387
>3eco_A MEPR; mutlidrug efflux pump regulator winged helix-turn-helix motif, DNA-binding, transcription, transcription regulation; 2.40A {Staphylococcus aureus} SCOP: a.4.5.0
Probab=93.09 E-value=0.094 Score=40.40 Aligned_cols=55 Identities=18% Similarity=0.198 Sum_probs=44.9
Q ss_pred CCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 18 TPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 18 ~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
++.|..+||+.+ ++++..+.++++.|...|+|++... |...-.+.+|+.|..+..
T Consensus 46 ~~~t~~ela~~l----~~~~~tvs~~l~~Le~~Gli~r~~~~~D~R~~~~~LT~~G~~~~~ 102 (139)
T 3eco_A 46 DGLTQNDIAKAL----QRTGPTVSNLLRNLERKKLIYRYVDAQDTRRKNIGLTTSGIKLVE 102 (139)
T ss_dssp TCEEHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEECCC--CCEEEEECHHHHHHHH
T ss_pred CCcCHHHHHHHh----CCCcccHHHHHHHHHHCCCEeecCCCCCCCeeeeEECHHHHHHHH
Confidence 499999999999 9999999999999999999987642 111235889988876664
No 388
>1s3j_A YUSO protein; structural genomics, MARR transcriptional regulator family, PSI, protein structure initiative; HET: MSE; 2.25A {Bacillus subtilis} SCOP: a.4.5.28
Probab=93.02 E-value=0.059 Score=42.36 Aligned_cols=57 Identities=18% Similarity=0.151 Sum_probs=45.7
Q ss_pred CCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 16 ANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
..++.|..+||+.+ ++++..+.+.++.|...|+|.+... |...-.+.+|+.+..+..
T Consensus 48 ~~~~~t~~ela~~l----~~s~~tvs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~~ 106 (155)
T 1s3j_A 48 KHGSLKVSEIAERM----EVKPSAVTLMADRLEQKNLIARTHNTKDRRVIDLSLTDEGDIKFE 106 (155)
T ss_dssp HHSEEEHHHHHHHH----TSCHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEECHHHHHHHH
T ss_pred HcCCCCHHHHHHHH----CCCHHHHHHHHHHHHHCCCEeecCCCCCCceEEEEECHHHHHHHH
Confidence 45789999999999 9999999999999999999988642 111125888988866554
No 389
>3u1d_A Uncharacterized protein; GNTR-superfamily, structural genomics, PSI-biology, midwest for structural genomics, MCSG; 1.80A {Halomicrobium mukohataei}
Probab=92.92 E-value=0.13 Score=40.99 Aligned_cols=86 Identities=22% Similarity=0.189 Sum_probs=61.0
Q ss_pred hhhhhhhhhcCC--CCCCHHHHHHHhCcCCC-CCcchHHHHHHHHHcCCceeeeccc---ccCc----eEEcChhchhhh
Q 021707 6 CRDGRKKVRLAN--TPLSVSQILTCILPSGG-GDAENLQCILRLLTSYGVFSEHREF---RGER----KYSLTEIGKSLV 75 (309)
Q Consensus 6 ~~~g~~~~~l~~--~~~t~~eLA~~~~~~~g-~~~~~l~rlL~~L~~~gll~~~~~~---~~~~----~y~~t~~~~~l~ 75 (309)
.+..++..++.. +..|++||++.. + ++...+.+-|+.|+..|+|++...+ .+.| .|.+|+.+..++
T Consensus 30 tR~~IL~~Ll~~p~~~~ta~eL~~~l----~~lS~aTVyrhL~~L~eaGLV~~~~~~~~~~~rGrP~k~Y~LT~~Gr~~l 105 (151)
T 3u1d_A 30 TRLDVLHQILAQPDGVLSVEELLYRN----PDETEANLRYHVDELVDRGIVEKIPVPRAKSVDDPPTTFYAVTGEGIALL 105 (151)
T ss_dssp HHHHHHHHHHHSTTSCBCHHHHHHHC----TTSCHHHHHHHHHHHHHTTSEEEEECCCCTTSSSCCCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHCCCeEEeecCcCcccCCCCceEEEECHHHHHHH
Confidence 455666666653 568999999999 7 9999999999999999999865311 1112 799999997766
Q ss_pred cCCCCCChHHHHHHhcchhhhhhhhhHHHHhc
Q 021707 76 TDAEGLSYAPYVLQHHQDAFMSAWPLVHEAVL 107 (309)
Q Consensus 76 ~~~~~~~~~~~i~~~~~~~~~~~~~~L~~~l~ 107 (309)
..- ..+. -..+|..|.+.+.
T Consensus 106 ~~y--~~la----------~~~alr~l~~~v~ 125 (151)
T 3u1d_A 106 RAV--SMYE----------EAAVWRSVYEQME 125 (151)
T ss_dssp HHT--TCST----------HHHHTHHHHHHSC
T ss_pred HHh--HHHh----------HHHHHHHHHHHhh
Confidence 431 1111 1257788888873
No 390
>2rdp_A Putative transcriptional regulator MARR; PFAM PF01047, winged-helix binding motif, structural genomics, PSI-2; 2.30A {Geobacillus stearothermophilus}
Probab=92.92 E-value=0.1 Score=40.75 Aligned_cols=57 Identities=14% Similarity=0.191 Sum_probs=45.6
Q ss_pred CCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 16 ANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
..++.|..+||+.+ ++++..+.+.++.|...|+|..... |...-.+.+|+.+..+..
T Consensus 53 ~~~~~t~~ela~~l----~~~~~tvs~~l~~Le~~Glv~r~~~~~d~R~~~~~lT~~G~~~~~ 111 (150)
T 2rdp_A 53 EEGDLTVGELSNKM----YLACSTTTDLVDRMERNGLVARVRDEHDRRVVRIRLLEKGERIIE 111 (150)
T ss_dssp HHCSBCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEECCC---CEEEEECHHHHHHHH
T ss_pred HcCCCCHHHHHHHH----CCCchhHHHHHHHHHHCCCeeecCCCCCcceeEeEECHhHHHHHH
Confidence 45789999999999 9999999999999999999988641 111234889988876654
No 391
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.91 E-value=0.15 Score=50.77 Aligned_cols=103 Identities=15% Similarity=0.158 Sum_probs=79.8
Q ss_pred CcceEEEecCCccHHHHHHHHhcC--------CCceEEEeechhHHhhCCC-----------------------------
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHH--------FICEGINFDLPEVVGEAPS----------------------------- 202 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p--------~~~~~~~~D~p~~~~~a~~----------------------------- 202 (309)
+...||-+|||.=....+|...+| +++ .+=+|+|++++..++
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~-~~EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVS-FIDIDYSDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFL 185 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEE-EEEEECHHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCE-EEECccHHHHHHHHHHHHcChHHHHhhccccccccccccccccc
Confidence 357899999999999999998866 566 788888887754321
Q ss_pred -CCCceEEeCCCCCC--C----------CC-C-ceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEeccccCCCC
Q 021707 203 -IPGVTHIGGDMFNS--I----------PA-A-NAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVLLDDS 265 (309)
Q Consensus 203 -~~ri~~~~~d~~~~--~----------p~-~-D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~~~~~ 265 (309)
.++.++++.|+.+. + .. . =++++=-+|.+++++++.++|+.+.+ + |++.+++.|.+.+..+
T Consensus 186 ~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~-~-~~~~~~~~e~~~~~~~ 261 (695)
T 2zwa_A 186 TTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSK-M-ENSHFIILEQLIPKGP 261 (695)
T ss_dssp ECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHT-S-SSEEEEEEEECCTTCT
T ss_pred cCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhh-C-CCceEEEEEeecCCCC
Confidence 04899999999873 1 22 2 35666789999999999999999984 5 7889999999877643
No 392
>4hbl_A Transcriptional regulator, MARR family; HTH, transcription factor, DNA binding; 2.50A {Staphylococcus epidermidis}
Probab=92.88 E-value=0.065 Score=42.08 Aligned_cols=59 Identities=17% Similarity=0.210 Sum_probs=45.1
Q ss_pred hcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 14 RLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 14 ~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
+...+++|..+||+.+ ++++..+.++++.|+..|+|++... |...-.+.+|+.|..+..
T Consensus 50 l~~~~~~~~~eLa~~l----~~~~~~vs~~l~~L~~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~ 110 (149)
T 4hbl_A 50 LWEENPQTLNSIGRHL----DLSSNTLTPMLKRLEQSGWVKRERQQSDKRQLIITLTDNGQQQQE 110 (149)
T ss_dssp HHHSSSEEHHHHHHHH----TCCHHHHHHHHHHHHHHTSEEC---------CEEEECSHHHHHHH
T ss_pred HHHCCCCCHHHHHHHH----CCCHHHHHHHHHHHHHCCCEeeCCCCCCcceeeeeECHHHHHHHH
Confidence 3346899999999999 9999999999999999999997642 111235889988876553
No 393
>3boq_A Transcriptional regulator, MARR family; MARR famil structural genomics, PSI-2, protein structure initiative; 2.39A {Silicibacter pomeroyi dss-3}
Probab=92.87 E-value=0.088 Score=41.63 Aligned_cols=57 Identities=16% Similarity=0.149 Sum_probs=44.9
Q ss_pred CCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 16 ANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
.+++.|..+||+.+ ++++..+.++++.|...|+|.+... |...-.+.+|+.+..+..
T Consensus 59 ~~~~~~~~ela~~l----~i~~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~~~lT~~G~~~~~ 117 (160)
T 3boq_A 59 NPDGLSMGKLSGAL----KVTNGNVSGLVNRLIKDGMVVKAMSADDRRSFSAKLTDAGLTTFK 117 (160)
T ss_dssp CTTCEEHHHHHHHC----SSCCSCHHHHHHHHHHHTSEEEC--------CEEEECHHHHHHHH
T ss_pred cCCCCCHHHHHHHH----CCChhhHHHHHHHHHHCCCEEeecCCCCCCeEEEEEChhHHHHHH
Confidence 56899999999999 9999999999999999999988641 111224889988876654
No 394
>3f3x_A Transcriptional regulator, MARR family, putative; DNA binding protein, DNA-binding, transcription regulation; 1.90A {Sulfolobus solfataricus}
Probab=92.77 E-value=0.081 Score=41.10 Aligned_cols=58 Identities=12% Similarity=0.092 Sum_probs=45.5
Q ss_pred hcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeeccc--ccCceEEcChhchhhhc
Q 021707 14 RLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREF--RGERKYSLTEIGKSLVT 76 (309)
Q Consensus 14 ~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~--~~~~~y~~t~~~~~l~~ 76 (309)
+...++ |..+||+.+ ++++..+.+.++.|...|+|.+.... ...-.+.+|+.|..+..
T Consensus 46 l~~~~~-~~~~la~~l----~~~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~ 105 (144)
T 3f3x_A 46 TSEEPR-SMVYLANRY----FVTQSAITAAVDKLEAKGLVRRIRDSKDRRIVIVEITPKGRQVLL 105 (144)
T ss_dssp HHHSCE-EHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred HHHCCC-CHHHHHHHH----CCChhHHHHHHHHHHHCCCEEeccCCCCCceEEEEECHHHHHHHH
Confidence 334555 999999999 99999999999999999999886521 00125899998876654
No 395
>2eth_A Transcriptional regulator, putative, MAR family; MARR family, structural genomics, joint center for structura genomics, JCSG; 2.30A {Thermotoga maritima} SCOP: a.4.5.28
Probab=92.71 E-value=0.12 Score=40.61 Aligned_cols=61 Identities=18% Similarity=0.201 Sum_probs=47.5
Q ss_pred hhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 12 KVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 12 ~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
..+...++.|..+||+.+ +++...+.+.++.|+..|+|.+... +...-.+.+|+.+..+..
T Consensus 51 ~~l~~~~~~t~~ela~~l----~is~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~~~lT~~G~~~~~ 113 (154)
T 2eth_A 51 LYVALFGPKKMKEIAEFL----STTKSNVTNVVDSLEKRGLVVREMDPVDRRTYRVVLTEKGKEIFG 113 (154)
T ss_dssp HHHHHHCCBCHHHHHHHT----TSCHHHHHHHHHHHHHTTSEEEEECTTTSSCEEEEECHHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHH----CCCHHHHHHHHHHHHHCCCEEeeCCCCCcceeEEEECHHHHHHHH
Confidence 333345789999999999 9999999999999999999988641 111234888988876654
No 396
>2fbi_A Probable transcriptional regulator; MARR, APC5816, structural genomic protein structure initiative; 2.10A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=92.68 E-value=0.07 Score=41.12 Aligned_cols=59 Identities=14% Similarity=0.061 Sum_probs=46.5
Q ss_pred hcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 14 RLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 14 ~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
+...++.|..+||+.+ ++++..+.+.++.|...|+|.+... |...-.+.+|+.+..+..
T Consensus 45 l~~~~~~t~~ela~~l----~~s~~~vs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~~ 105 (142)
T 2fbi_A 45 LRQQGEMESYQLANQA----CILRPSMTGVLARLERDGIVRRWKAPKDQRRVYVNLTEKGQQCFV 105 (142)
T ss_dssp HHHHCSEEHHHHHHHT----TCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHH----CCCHhHHHHHHHHHHHCCCEEeecCCCCCCeeEEEECHHHHHHHH
Confidence 3345789999999999 9999999999999999999987641 111124889988876654
No 397
>3e6m_A MARR family transcriptional regulator; APC88769, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; 2.20A {Silicibacter pomeroyi}
Probab=92.64 E-value=0.079 Score=42.17 Aligned_cols=57 Identities=21% Similarity=0.141 Sum_probs=46.5
Q ss_pred CCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 16 ANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
..+++|..|||+.+ ++++..+.++++.|...|+|.+... |...-.+.+|+.|..+..
T Consensus 64 ~~~~~t~~eLa~~l----~~~~~~vs~~l~~Le~~Glv~r~~~~~DrR~~~~~LT~~G~~~~~ 122 (161)
T 3e6m_A 64 AYGELTVGQLATLG----VMEQSTTSRTVDQLVDEGLAARSISDADQRKRTVVLTRKGKKKLA 122 (161)
T ss_dssp HHSEEEHHHHHHHT----TCCHHHHHHHHHHHHHTTSEEECC---CCCSCEEEECHHHHHHHH
T ss_pred hCCCCCHHHHHHHH----CCCHHHHHHHHHHHHHCCCEEeeCCcccCCeeEeeECHHHHHHHH
Confidence 35789999999999 9999999999999999999997652 111235899998876664
No 398
>2nyx_A Probable transcriptional regulatory protein, RV14; alpha/beta, structural genomics, PSI-2; 2.30A {Mycobacterium tuberculosis}
Probab=92.64 E-value=0.082 Score=42.48 Aligned_cols=57 Identities=18% Similarity=0.253 Sum_probs=46.2
Q ss_pred CCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 16 ANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
..+++|..|||+.+ +++...+.++++.|+..|+|.+... |...-.+.+|+.+..+..
T Consensus 56 ~~~~~t~~eLa~~l----~is~~tvs~~l~~Le~~GlV~r~~~~~DrR~~~~~LT~~G~~~~~ 114 (168)
T 2nyx_A 56 NHGPINLATLATLL----GVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVR 114 (168)
T ss_dssp HHCSEEHHHHHHHH----TSCHHHHHHHHHHHHHTTSEEEEECSSCSSCEEEEECHHHHHHHH
T ss_pred HcCCCCHHHHHHHh----CCCHHHHHHHHHHHHHCCCEEeccCCCCCCeeEEEECHHHHHHHH
Confidence 45789999999999 9999999999999999999988542 111234889998876654
No 399
>2frh_A SARA, staphylococcal accessory regulator A; winged-helix protein, divalent metal binding, transcription; 2.50A {Staphylococcus aureus} SCOP: a.4.5.28 PDB: 2fnp_A 1fzp_D
Probab=92.60 E-value=0.066 Score=41.08 Aligned_cols=55 Identities=7% Similarity=0.112 Sum_probs=45.3
Q ss_pred CCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 18 TPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 18 ~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
++.|..|||+.+ ++++..+.++++.|...|+|.+... |...-.+.+|+.|..+..
T Consensus 52 ~~~t~~eLa~~l----~~~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~i~LT~~G~~~~~ 108 (127)
T 2frh_A 52 KEYYLKDIINHL----NYKQPQVVKAVKILSQEDYFDKKRNEHDERTVLILVNAQQRKKIE 108 (127)
T ss_dssp SEEEHHHHHHHS----SSHHHHHHHHHHHHHHTTSSCCBCCSSSSCCCEEECCSHHHHHHH
T ss_pred CCcCHHHHHHHH----CCCHHHHHHHHHHHHHCCCEEecCCCCCCCeeEEEECHHHHHHHH
Confidence 789999999999 9999999999999999999988531 211235889998876654
No 400
>3fm5_A Transcriptional regulator; MCSG, PF04017, PSI, MARR, structu genomics, protein structure initiative, midwest center for structural genomics; HET: GOL; 2.00A {Rhodococcus jostii}
Probab=92.49 E-value=0.11 Score=40.55 Aligned_cols=56 Identities=16% Similarity=0.217 Sum_probs=42.5
Q ss_pred CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 17 NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 17 ~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
++++|..+||+.+ ++++..+.++++-|+..|+|++... |...-.+.+|+.|..+..
T Consensus 52 ~~~~t~~eLa~~l----~i~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~ 109 (150)
T 3fm5_A 52 AEGVNQRGVAATM----GLDPSQIVGLVDELEERGLVVRTLDPSDRRNKLIAATEEGRRLRD 109 (150)
T ss_dssp TTCCCSHHHHHHH----TCCHHHHHHHHHHHHTTTSEEC-----------CEECHHHHHHHH
T ss_pred CCCcCHHHHHHHH----CCCHhHHHHHHHHHHHCCCEEeeCCccccchheeeECHHHHHHHH
Confidence 4578999999999 9999999999999999999988642 111123889988876664
No 401
>3deu_A Transcriptional regulator SLYA; MARR, WING-helix, transcription regulator, activator, DNA-binding, repressor; HET: SAL; 2.30A {Salmonella typhimurium} SCOP: a.4.5.28
Probab=92.46 E-value=0.13 Score=41.31 Aligned_cols=56 Identities=25% Similarity=0.273 Sum_probs=44.7
Q ss_pred CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 17 NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 17 ~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
++++|..|||+.+ +++...+.++++.|+..|+|++... |...-.+.+|+.|+.+..
T Consensus 66 ~~~~t~~eLa~~l----~i~~~tvs~~l~~Le~~GlV~r~~~~~DrR~~~l~LT~~G~~~~~ 123 (166)
T 3deu_A 66 PPDQSQIQLAKAI----GIEQPSLVRTLDQLEDKGLISRQTCASDRRAKRIKLTEKAEPLIA 123 (166)
T ss_dssp CSSEEHHHHHHHH----TSCHHHHHHHHHHHHHTTSEEEC--------CEEEECGGGHHHHH
T ss_pred CCCCCHHHHHHHH----CCCHhhHHHHHHHHHHCCCEEeeCCCCCCCeeEEEECHHHHHHHH
Confidence 5789999999999 9999999999999999999998652 111235889998876664
No 402
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=91.93 E-value=0.47 Score=45.71 Aligned_cols=110 Identities=8% Similarity=0.019 Sum_probs=67.2
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcC-------------CCceEEEeec-hhHHhhCCC------CCCce
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHH-------------FICEGINFDL-PEVVGEAPS------IPGVT 207 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~~D~-p~~~~~a~~------~~ri~ 207 (309)
+.-+++.++ .....+|+|-.||+|.++.+..++.. ..+ ..++|. +.+...++- .+.-.
T Consensus 206 v~lmv~l~~-p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~-i~G~E~~~~~~~la~mNl~lhg~~~~~ 283 (530)
T 3ufb_A 206 VRFMVEVMD-PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESS-IFGGEAKSLPYLLVQMNLLLHGLEYPR 283 (530)
T ss_dssp HHHHHHHHC-CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCC-EEEECCSHHHHHHHHHHHHHHTCSCCE
T ss_pred HHHHHHhhc-cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhh-hhhhhccHHHHHHHHHHHHhcCCcccc
Confidence 444555554 44567999999999999987765421 345 889998 444444432 13446
Q ss_pred EEeCCCCCC-----CC--CCceeeehhhhh---------cCC-----hhHHHHHHHHHHHhcC-------CCcEEEEecc
Q 021707 208 HIGGDMFNS-----IP--AANAIFMKWVLA---------TWT-----DDECKLIMENCYKALL-------AGGKLIACEP 259 (309)
Q Consensus 208 ~~~~d~~~~-----~p--~~D~i~~~~vlh---------~~~-----d~~~~~iL~~~~~aL~-------pgG~l~i~e~ 259 (309)
+..+|.+.. .+ ..|+|+.+--.- .++ .+.....+..+.+.|+ |||++.++=+
T Consensus 284 I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP 363 (530)
T 3ufb_A 284 IDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVP 363 (530)
T ss_dssp EECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEE
T ss_pred ccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEec
Confidence 677887652 11 259988753331 111 1112345677777776 7999887743
No 403
>1p6r_A Penicillinase repressor; transcription regulation, DNA-binding, winged helix protein, bacterial resistance to antibiotics; NMR {Bacillus licheniformis} SCOP: a.4.5.39 PDB: 2p7c_B
Probab=91.91 E-value=0.099 Score=36.77 Aligned_cols=48 Identities=15% Similarity=0.259 Sum_probs=40.1
Q ss_pred hhhhhhhhhcCCCCCCHHHHHHHhCcCCC----CCcchHHHHHHHHHcCCceeeec
Q 021707 6 CRDGRKKVRLANTPLSVSQILTCILPSGG----GDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 6 ~~~g~~~~~l~~~~~t~~eLA~~~~~~~g----~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
.+..+.+.+..+++.|+.||++.+ + +++..+.++|+.|...|+|.+..
T Consensus 10 ~e~~vL~~L~~~~~~t~~ei~~~l----~~~~~~s~~Tv~~~l~rL~~kGlv~r~~ 61 (82)
T 1p6r_A 10 AELEVMKVIWKHSSINTNEVIKEL----SKTSTWSPKTIQTMLLRLIKKGALNHHK 61 (82)
T ss_dssp HHHHHHHHHHTSSSEEHHHHHHHH----HHHSCCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHcCCCCCHHHHHHHH----hhcCCccHHHHHHHHHHHHHCCCeEEEe
Confidence 344555656567899999999999 6 67889999999999999999875
No 404
>2d1h_A ST1889, 109AA long hypothetical transcriptional regulator; helix-turn-helix, intermolecular and intramolecular S-S bond structural genomics; 2.05A {Sulfolobus tokodaii} SCOP: a.4.5.50
Probab=91.89 E-value=0.12 Score=37.80 Aligned_cols=37 Identities=11% Similarity=0.260 Sum_probs=35.3
Q ss_pred CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeec
Q 021707 17 NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 17 ~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
+++.|..|||+.+ |++...+.+.|+.|...|++....
T Consensus 34 ~~~~t~~ela~~l----~is~~tv~~~l~~L~~~g~v~~~~ 70 (109)
T 2d1h_A 34 EKPITSEELADIF----KLSKTTVENSLKKLIELGLVVRTK 70 (109)
T ss_dssp CSCEEHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred CCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCeEeec
Confidence 7899999999999 999999999999999999999875
No 405
>1z91_A Organic hydroperoxide resistance transcriptional; OHRR, MARR family, bacterial transcription factor, DNA bindi protein; 2.50A {Bacillus subtilis} SCOP: a.4.5.28 PDB: 1z9c_A*
Probab=91.64 E-value=0.076 Score=41.30 Aligned_cols=58 Identities=22% Similarity=0.224 Sum_probs=47.1
Q ss_pred CCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhcC
Q 021707 16 ANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVTD 77 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~~ 77 (309)
..++.|..+||+.+ ++++..+.+.++.|...|+|++... |...-.+.+|+.|..+...
T Consensus 51 ~~~~~~~~~la~~l----~~~~~tvs~~l~~L~~~glv~r~~~~~d~R~~~~~LT~~G~~~~~~ 110 (147)
T 1z91_A 51 EHETLTVKKMGEQL----YLDSGTLTPMLKRMEQQGLITRKRSEEDERSVLISLTEDGALLKEK 110 (147)
T ss_dssp HHSEEEHHHHHHTT----TCCHHHHHHHHHHHHHHTSEECCBCSSCTTSBEEEECHHHHSGGGG
T ss_pred HCCCCCHHHHHHHH----CCCcCcHHHHHHHHHHCCCEEeccCCCCCCeeEEEECHhHHHHHHH
Confidence 45789999999999 9999999999999999999988642 1112348899999777654
No 406
>3jw4_A Transcriptional regulator, MARR/EMRR family; DNA-binding protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Clostridium acetobutylicum} SCOP: a.4.5.0
Probab=91.63 E-value=0.13 Score=40.10 Aligned_cols=55 Identities=13% Similarity=0.199 Sum_probs=37.6
Q ss_pred CCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 18 TPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 18 ~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
+++|..+||+.+ ++++..+.++++.|...|+|.+... |...-.+.+|+.|+.+..
T Consensus 56 ~~~t~~eLa~~l----~~~~~~vs~~l~~L~~~Glv~r~~~~~DrR~~~~~LT~~G~~~~~ 112 (148)
T 3jw4_A 56 SGIIQKDLAQFF----GRRGASITSMLQGLEKKGYIERRIPENNARQKNIYVLPKGAALVE 112 (148)
T ss_dssp TCCCHHHHHHC----------CHHHHHHHHHHTTSBCCC--------CCCCBCHHHHHHHH
T ss_pred CCCCHHHHHHHH----CCChhHHHHHHHHHHHCCCEEeeCCCCCchhheeeECHHHHHHHH
Confidence 799999999999 9999999999999999999987642 111235778888876654
No 407
>3u2r_A Regulatory protein MARR; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, helix-turn-helix; 2.20A {Planctomyces limnophilus}
Probab=91.63 E-value=0.15 Score=40.79 Aligned_cols=57 Identities=21% Similarity=0.267 Sum_probs=43.2
Q ss_pred CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhcC
Q 021707 17 NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVTD 77 (309)
Q Consensus 17 ~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~~ 77 (309)
++++|..+||+.+ ++++..+.++++.|+..|+|.+... |...-.+.+|+.|..+...
T Consensus 60 ~~~~t~~eLa~~l----~~~~~tvs~~l~~Le~~Glv~r~~~~~DrR~~~l~LT~~G~~~~~~ 118 (168)
T 3u2r_A 60 PEGMATLQIADRL----ISRAPDITRLIDRLDDRGLVLRTRKPENRRVVEVALTDAGLKLLKD 118 (168)
T ss_dssp TSCEEHHHHHHHC-------CTHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHHHH
T ss_pred CCCcCHHHHHHHH----CCChhhHHHHHHHHHHCCCEeecCCCCCCCeeEeEECHHHHHHHHH
Confidence 4699999999999 9999999999999999999998652 1111258899988766653
No 408
>1ku9_A Hypothetical protein MJ223; putative transcription factor, homodimeric winged-helix fold, structural genomics, PSI; 2.80A {Methanocaldococcus jannaschii} SCOP: a.4.5.36
Probab=91.57 E-value=0.2 Score=38.76 Aligned_cols=50 Identities=18% Similarity=0.247 Sum_probs=39.9
Q ss_pred CCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcCh
Q 021707 16 ANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTE 69 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~ 69 (309)
.+++.|..|||+.+ |+++..+.+.|+.|...|+|.......+...|.++.
T Consensus 38 ~~~~~t~~ela~~l----~~~~stvs~~l~~L~~~G~v~r~~~~~d~r~~~~~~ 87 (152)
T 1ku9_A 38 SDKPLTISDIMEEL----KISKGNVSMSLKKLEELGFVRKVWIKGERKNYYEAV 87 (152)
T ss_dssp CSSCEEHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEECCTTCSSCEEEEC
T ss_pred cCCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEEEecCCCceEEEeec
Confidence 56899999999999 999999999999999999999863110123455554
No 409
>3nqo_A MARR-family transcriptional regulator; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PG4; 2.20A {Clostridium difficile}
Probab=91.40 E-value=0.17 Score=41.61 Aligned_cols=57 Identities=14% Similarity=0.243 Sum_probs=47.0
Q ss_pred CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhcC
Q 021707 17 NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVTD 77 (309)
Q Consensus 17 ~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~~ 77 (309)
++++|..+||+.+ ++++..+.++++.|+..|+|.+... |...-.+.+|+.|..+...
T Consensus 55 ~~~~t~~eLa~~l----~is~~tvs~~l~~Le~~GlV~r~~~~~DrR~~~l~LT~~G~~~~~~ 113 (189)
T 3nqo_A 55 EEETTLNNIARKM----GTSKQNINRLVANLEKNGYVDVIPSPHDKRAINVKVTDLGKKVMVT 113 (189)
T ss_dssp GGGCCHHHHHHHH----TSCHHHHHHHHHHHHHTTSEEEEECSSCSSCEEEEECHHHHHHHHH
T ss_pred CCCcCHHHHHHHH----CCCHHHHHHHHHHHHHCCCEEeccCCCCCCeeEEEECHHHHHHHHH
Confidence 5789999999999 9999999999999999999998652 1112358999999766553
No 410
>2fxa_A Protease production regulatory protein HPR; protease porduction, regulation, STR genomics, PSI, protein structure initiative; HET: PGE P6G 1PE; 2.40A {Bacillus subtilis} SCOP: a.4.5.28
Probab=91.07 E-value=0.12 Score=43.30 Aligned_cols=57 Identities=16% Similarity=0.036 Sum_probs=46.0
Q ss_pred CCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 16 ANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
..+++|..+||+.+ +++...+.++++.|...|+|.+... |...-.+.+|+.|..+..
T Consensus 59 ~~~~~t~~eLa~~l----~i~~stvs~~l~~Le~~GlV~r~~~~~DrR~~~l~LT~~G~~~~~ 117 (207)
T 2fxa_A 59 QLNGASISEIAKFG----VMHVSTAFNFSKKLEERGYLRFSKRLNDKRNTYVQLTEEGTEVFW 117 (207)
T ss_dssp HHTSEEHHHHHHHT----TCCHHHHHHHHHHHHHHTSEEEECC------CEEEECHHHHHHHH
T ss_pred HCCCcCHHHHHHHH----CCCHHHHHHHHHHHHHCCCEEEecCCCCCceEEEEECHHHHHHHH
Confidence 35789999999999 9999999999999999999988752 111236899999976654
No 411
>4b8x_A SCO5413, possible MARR-transcriptional regulator; winged helix motif; HET: CME; 1.25A {Streptomyces coelicolor}
Probab=91.01 E-value=0.15 Score=40.13 Aligned_cols=56 Identities=14% Similarity=0.157 Sum_probs=45.2
Q ss_pred CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 17 NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 17 ~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
++++|..+||+.+ ++++..+.++++-|...|+|++... |...-...+|+.|+.+..
T Consensus 49 ~~~~t~~eLa~~l----~~~~~tvs~~v~~Le~~Glv~r~~~~~DrR~~~l~LT~~G~~~~~ 106 (147)
T 4b8x_A 49 SGELPMSKIGERL----MVHPTSVTNTVDRLVRSGLVAKRPNPNDGRGTLATITDKGREVVE 106 (147)
T ss_dssp GGEEEHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEECC----CEEEEECHHHHHHHH
T ss_pred CCCcCHHHHHHHH----CCCHHHHHHHHHHHHhCCCEEEeecCCcCceeEEEECHHHHHHHH
Confidence 4689999999999 9999999999999999999998752 111124889998876654
No 412
>2k4b_A Transcriptional regulator; DNA binding protein, winged helix; NMR {Lactococcus lactis subsp}
Probab=90.93 E-value=0.1 Score=38.52 Aligned_cols=50 Identities=14% Similarity=0.020 Sum_probs=37.8
Q ss_pred hhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeec
Q 021707 8 DGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 8 ~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
..+.+.+-.++++|+.||++.+....++++..+.++|+-|+..|+|.+..
T Consensus 38 ~~VL~~L~~~~~~t~~eL~~~l~~~~~~s~sTVt~~L~rLe~KGlV~R~~ 87 (99)
T 2k4b_A 38 LIVMRVIWSLGEARVDEIYAQIPQELEWSLATVKTLLGRLVKKEMLSTEK 87 (99)
T ss_dssp SHHHHHHHHHSCEEHHHHHHTCCGGGCCCHHHHHHHHHHHHHTTSCEEEE
T ss_pred HHHHHHHHhCCCCCHHHHHHHHhcccCCCHhhHHHHHHHHHHCCCEEEEe
Confidence 34444444568999999999991101245789999999999999999876
No 413
>1okr_A MECI, methicillin resistance regulatory protein MECI; bacterial antibiotic resistance, MECI protein, transcriptional regulatory element; 2.4A {Staphylococcus aureus} SCOP: a.4.5.39 PDB: 1sax_A 1sd7_A 2d45_A 1sd6_A
Probab=90.90 E-value=0.083 Score=40.02 Aligned_cols=63 Identities=14% Similarity=0.138 Sum_probs=45.4
Q ss_pred hhhhhcCCCCCCHHHHHHHhCcCCC----CCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhc
Q 021707 10 RKKVRLANTPLSVSQILTCILPSGG----GDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 10 ~~~~~l~~~~~t~~eLA~~~~~~~g----~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~ 76 (309)
+...+..+++.|..|||+.+ + +++..+.++|+-|...|+|.+...+..--.+.+|+.+..+..
T Consensus 15 vL~~l~~~~~~t~~ela~~l----~~~~~~s~~tv~~~l~~L~~~Glv~r~~~~rr~~~~~lT~~g~~~~~ 81 (123)
T 1okr_A 15 VMNIIWMKKYASANNIIEEI----QMQKDWSPKTIRTLITRLYKKGFIDRKKDNKIFQYYSLVEESDIKYK 81 (123)
T ss_dssp HHHHHHHHSSEEHHHHHHHH----HHHCCCCHHHHHHHHHHHHHHTSEEEEEETTEEEEEESSCHHHHHHH
T ss_pred HHHHHHhCCCcCHHHHHHHH----hccCCCcHhhHHHHHHHHHHCCCeEEEecCCeEEEEEecCHHHHHHH
Confidence 33333346899999999999 8 779999999999999999998752110011457777665543
No 414
>4aik_A Transcriptional regulator SLYA; transcription, transcription factor; 1.85A {Yersinia pseudotuberculosis} PDB: 4aih_A 4aij_A 3qpt_A* 3q5f_A*
Probab=90.86 E-value=0.47 Score=37.39 Aligned_cols=56 Identities=23% Similarity=0.299 Sum_probs=45.1
Q ss_pred CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 17 NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 17 ~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
+++.+..|||+.+ ++++..+.++++.|+..|+|.+... |...-.+.+|+.|..+..
T Consensus 44 ~~~~~~~eLa~~l----~~~~~tvs~~v~~Le~~GlV~R~~~~~DrR~~~l~LT~~G~~~~~ 101 (151)
T 4aik_A 44 PPEQSQIQLAKAI----GIEQPSLVRTLDQLEEKGLITRHTSANDRRAKRIKLTEQSSPIIE 101 (151)
T ss_dssp CTTSCHHHHHHHH----TSCHHHHHHHHHHHHHTTSEEEEECSSCTTCEEEEECGGGHHHHH
T ss_pred CCCCcHHHHHHHH----CcCHHHHHHHHHHHHhCCCeEeecCCCCCcchhhhcCHHHHHHHH
Confidence 4567889999999 9999999999999999999987652 111235889998876664
No 415
>1q1h_A TFE, transcription factor E, TFE; TFIIE, transcription initiation, preinitiation complex, RNA polymerase II, transcription bubble; 2.90A {Sulfolobus solfataricus} SCOP: a.4.5.41
Probab=90.86 E-value=0.11 Score=38.67 Aligned_cols=45 Identities=16% Similarity=0.160 Sum_probs=38.2
Q ss_pred hhhhhhhcCCC-CCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeee
Q 021707 8 DGRKKVRLANT-PLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEH 56 (309)
Q Consensus 8 ~g~~~~~l~~~-~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~ 56 (309)
+.++..++..| +.|..+||+.+ |++...+++.|..|...|+|...
T Consensus 21 l~Il~~l~~~g~~~s~~eLa~~l----gvs~~tV~~~L~~L~~~GlV~~~ 66 (110)
T 1q1h_A 21 IDVLRILLDKGTEMTDEEIANQL----NIKVNDVRKKLNLLEEQGFVSYR 66 (110)
T ss_dssp HHHHHHHHHHCSCBCHHHHHHTT----TSCHHHHHHHHHHHHHHTSCEEE
T ss_pred HHHHHHHHHcCCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEEE
Confidence 34555554445 89999999999 99999999999999999999876
No 416
>3r0a_A Putative transcriptional regulator; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.31A {Methanosarcina mazei}
Probab=90.78 E-value=0.16 Score=38.84 Aligned_cols=44 Identities=11% Similarity=0.135 Sum_probs=36.6
Q ss_pred hhhhhcCC-CC-CCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeec
Q 021707 10 RKKVRLAN-TP-LSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 10 ~~~~~l~~-~~-~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
++..+... +| +|+.|||+.+ +++...+.|.|+.|...|+|.+..
T Consensus 31 il~~L~~~~~~~~t~~eLa~~l----~~s~sTV~r~L~~L~~~GlV~r~~ 76 (123)
T 3r0a_A 31 VMKSFLNEPDRWIDTDALSKSL----KLDVSTVQRSVKKLHEKEILQRSQ 76 (123)
T ss_dssp HHHHHHHSTTCCEEHHHHHHHH----TSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHCCCCCcCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEeeC
Confidence 33334433 45 9999999999 999999999999999999998763
No 417
>4fx0_A Probable transcriptional repressor protein; helix-turn-helix, DNA binding, transcription regulator; 2.70A {Mycobacterium tuberculosis} PDB: 4fx4_A*
Probab=90.73 E-value=0.18 Score=39.77 Aligned_cols=55 Identities=18% Similarity=0.239 Sum_probs=37.9
Q ss_pred CCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc-cccCceEEcChhchhhhc
Q 021707 18 TPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE-FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 18 ~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~-~~~~~~y~~t~~~~~l~~ 76 (309)
+++|..|||+.+ ++++..+.++++.|...|+|....+ |...-...+|+.|+.+..
T Consensus 51 ~~~t~~eLa~~l----~~~~~tvsr~v~~Le~~glVr~~~~~DrR~~~v~LT~~G~~~~~ 106 (148)
T 4fx0_A 51 IDLTMSELAARI----GVERTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQ 106 (148)
T ss_dssp ---CHHHHHHHH----TCCHHHHHHHHHHHHHTTSBC-----------CCBCHHHHHHHH
T ss_pred CCcCHHHHHHHH----CCChhhHHHHHHHHHHCCCEEeeCCCCCCeeEEEECHHHHHHHH
Confidence 578999999999 9999999999999999999954432 111124778888866554
No 418
>2lkp_A Transcriptional regulator, ARSR family; symmetric homodimer, NI(II) binding protein, DNA binding Pro transcription regulator; NMR {Mycobacterium tuberculosis}
Probab=90.58 E-value=0.19 Score=37.87 Aligned_cols=45 Identities=22% Similarity=0.268 Sum_probs=38.0
Q ss_pred hhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeec
Q 021707 8 DGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 8 ~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
+.++..+.. ++.|..+||+.+ ++++..+.+.|+.|...|++....
T Consensus 35 ~~il~~L~~-~~~s~~ela~~l----~is~stvsr~l~~Le~~Glv~~~~ 79 (119)
T 2lkp_A 35 LMILTQLRN-GPLPVTDLAEAI----GMEQSAVSHQLRVLRNLGLVVGDR 79 (119)
T ss_dssp HHHHHHHHH-CCCCHHHHHHHH----SSCHHHHHHHHHHHHHHCSEEEEE
T ss_pred HHHHHHHHH-CCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEEEe
Confidence 344444443 789999999999 999999999999999999998764
No 419
>1z7u_A Hypothetical protein EF0647; winged-helix-turn-helix, MARR, structural genomics, PSI, Pro structure initiative; 2.20A {Enterococcus faecalis} SCOP: a.4.5.69
Probab=90.27 E-value=0.28 Score=36.73 Aligned_cols=57 Identities=18% Similarity=0.176 Sum_probs=45.7
Q ss_pred CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeeccc--ccCceEEcChhchhhhc
Q 021707 17 NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREF--RGERKYSLTEIGKSLVT 76 (309)
Q Consensus 17 ~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~--~~~~~y~~t~~~~~l~~ 76 (309)
+++.+..|||+.+ + ++++..+.+.|+.|...|+|++.... ...-.|++|+.|..+..
T Consensus 33 ~~~~~~~eLa~~l-~--~is~~tvs~~L~~Le~~GlI~r~~~~~d~r~~~~~LT~~G~~~~~ 91 (112)
T 1z7u_A 33 QGTKRNGELMRAL-D--GITQRVLTDRLREMEKDGLVHRESFNELPPRVEYTLTPEGYALYD 91 (112)
T ss_dssp HSCBCHHHHHHHS-T--TCCHHHHHHHHHHHHHHTSEEEEEECCSSCEEEEEECHHHHHHHH
T ss_pred hCCCCHHHHHHHh-c--cCCHHHHHHHHHHHHHCCCEEEeecCCCCCeEEEEECHhHHHHHH
Confidence 5899999999998 4 78999999999999999999876521 11125999998876553
No 420
>2pn6_A ST1022, 150AA long hypothetical transcriptional regulator; LRP/ASNC family Gln binding, structural genomics, NPPSFA; HET: GLN; 1.44A {Sulfolobus tokodaii} PDB: 2efn_A* 2e7x_A* 2e7w_A* 2yx4_A* 2efq_A* 2pmh_A* 2yx7_A* 2efp_A* 2efo_A*
Probab=90.06 E-value=0.31 Score=38.31 Aligned_cols=46 Identities=20% Similarity=0.089 Sum_probs=40.2
Q ss_pred hhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeee
Q 021707 7 RDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEH 56 (309)
Q Consensus 7 ~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~ 56 (309)
...+...+-.+++.|..|||+.+ |+++..+.+.++.|...|++...
T Consensus 5 ~~~il~~L~~~~~~~~~ela~~l----g~s~~tv~~~l~~L~~~G~i~~~ 50 (150)
T 2pn6_A 5 DLRILKILQYNAKYSLDEIAREI----RIPKATLSYRIKKLEKDGVIKGY 50 (150)
T ss_dssp HHHHHHHHTTCTTSCHHHHHHHH----TSCHHHHHHHHHHHHHTTSSCCC
T ss_pred HHHHHHHHHHcCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCcEEEE
Confidence 34556666667899999999999 99999999999999999999874
No 421
>2cfx_A HTH-type transcriptional regulator LRPC; transcriptional regulation, DNA binding, FFRP; 2.4A {Bacillus subtilis} SCOP: a.4.5.32 d.58.4.2
Probab=89.98 E-value=0.32 Score=38.05 Aligned_cols=46 Identities=15% Similarity=0.120 Sum_probs=39.9
Q ss_pred hhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeec
Q 021707 8 DGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 8 ~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
..+.+.+-.+++.|..|||+.+ |+++..+.+.++.|...|++....
T Consensus 8 ~~il~~L~~~~~~s~~ela~~l----g~s~~tv~~~l~~L~~~G~i~~~~ 53 (144)
T 2cfx_A 8 LNIIEELKKDSRLSMRELGRKI----KLSPPSVTERVRQLESFGIIKQYT 53 (144)
T ss_dssp HHHHHHHHHCSCCCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHcCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCeEEEe
Confidence 3455656567899999999999 999999999999999999998653
No 422
>3i71_A Ethanolamine utilization protein EUTK; helix-turn-helix, unknown function; HET: FLC; 2.10A {Escherichia coli}
Probab=89.96 E-value=0.86 Score=29.74 Aligned_cols=44 Identities=18% Similarity=0.293 Sum_probs=40.5
Q ss_pred CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcCh
Q 021707 17 NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTE 69 (309)
Q Consensus 17 ~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~ 69 (309)
.+.+|+.|+|... +++-+..+.-|+.|...|-+.+.+ -+|++.|
T Consensus 16 ~QGMTaGEVAA~f----~w~Le~ar~aLeqLf~~G~LRKRs-----SRYrlkp 59 (68)
T 3i71_A 16 RQGMTAGEVAAHF----GWPLEKARNALEQLFSAGTLRKRS-----SRYRLKP 59 (68)
T ss_dssp TTCBCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEC-----CEEEECC
T ss_pred hccccHHHHHHHh----CCcHHHHHHHHHHHHhcchhhhhc-----cccccCc
Confidence 5789999999999 999999999999999999999884 6899886
No 423
>2vn2_A DNAD, chromosome replication initiation protein; DNA replication, primosome; 2.3A {Geobacillus kaustophilus HTA426}
Probab=89.88 E-value=0.29 Score=37.75 Aligned_cols=35 Identities=11% Similarity=0.079 Sum_probs=32.9
Q ss_pred CCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeec
Q 021707 19 PLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 19 ~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
..|.++||+.+ ++++..+.+.++.|...|+|....
T Consensus 51 ~ps~~~LA~~l----~~s~~~V~~~l~~Le~kGlI~~~~ 85 (128)
T 2vn2_A 51 FPTPAELAERM----TVSAAECMEMVRRLLQKGMIAIEE 85 (128)
T ss_dssp SCCHHHHHHTS----SSCHHHHHHHHHHHHHTTSSEECC
T ss_pred CCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEEEe
Confidence 47999999999 999999999999999999999864
No 424
>2p8t_A Hypothetical protein PH0730; pyrococcus horikoshii OT3, STR genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.72 d.74.4.2
Probab=89.66 E-value=0.48 Score=39.53 Aligned_cols=50 Identities=24% Similarity=0.306 Sum_probs=44.0
Q ss_pred CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhh
Q 021707 17 NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLV 75 (309)
Q Consensus 17 ~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~ 75 (309)
++|++..+||+.+ ++++..++..++-|...|+++... +...+|+.|+.+.
T Consensus 28 ~~~V~~~~LA~~L----gvS~~SV~~~lkkL~e~GLV~~~~-----~Gv~LTe~G~~~A 77 (200)
T 2p8t_A 28 KEPLGRKQISERL----ELGEGSVRTLLRKLSHLDIIRSKQ-----RGHFLTLKGKEIR 77 (200)
T ss_dssp TSCBCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEC-------CEEECHHHHHHH
T ss_pred cCCccHHHHHHHh----CCCHHHHHHHHHHHHHCCCEEEeC-----CCeEECHHHHHHH
Confidence 5899999999999 999999999999999999999884 5799999996543
No 425
>2w25_A Probable transcriptional regulatory protein; transcription regulation, mutant, RV3291C, Glu104Ala, DNA-binding; 2.15A {Mycobacterium tuberculosis} PDB: 2vbw_A* 2vbx_A* 2vby_A* 2vbz_A* 2vc0_A 2vc1_A 2w24_A 2ivm_A 2w29_A 2qz8_A
Probab=89.31 E-value=0.31 Score=38.39 Aligned_cols=45 Identities=22% Similarity=0.145 Sum_probs=39.1
Q ss_pred hhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeec
Q 021707 9 GRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 9 g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
.+...+..+++.|..|||+.+ |+++..+.+.++.|...|++....
T Consensus 11 ~iL~~L~~~~~~s~~ela~~l----g~s~~tv~~~l~~L~~~G~i~~~~ 55 (150)
T 2w25_A 11 ILVRELAADGRATLSELATRA----GLSVSAVQSRVRRLESRGVVQGYS 55 (150)
T ss_dssp HHHHHHHHCTTCCHHHHHHHH----TSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHcCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEEEE
Confidence 455555567899999999999 999999999999999999997653
No 426
>4g6q_A Putative uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.08A {Kribbella flavida}
Probab=89.20 E-value=1.9 Score=35.22 Aligned_cols=64 Identities=17% Similarity=0.175 Sum_probs=48.0
Q ss_pred hhhhhhhhhcCCCCCCHHHHHHHhCcCCC-CCcchHHHHHHHHHcCCceeeecccc----cCceEEcChhchhh
Q 021707 6 CRDGRKKVRLANTPLSVSQILTCILPSGG-GDAENLQCILRLLTSYGVFSEHREFR----GERKYSLTEIGKSL 74 (309)
Q Consensus 6 ~~~g~~~~~l~~~~~t~~eLA~~~~~~~g-~~~~~l~rlL~~L~~~gll~~~~~~~----~~~~y~~t~~~~~l 74 (309)
.++.++.++ .++|.|+.|||+.+ + ++...+.+-|+.|...|+|+..++.. ....|++++.+..+
T Consensus 24 ~Rl~il~~L-~~~~~~~~~l~~~l----~~~~~~~~s~Hl~~L~~aglv~~~~e~~~~g~~er~y~~~~~~~~~ 92 (182)
T 4g6q_A 24 LRWRITQLL-IGRSLTTRELAELL----PDVATTTLYRQVGILVKAGVLMVTAEHQVRGAVERTYTLNTQAGDA 92 (182)
T ss_dssp HHHHHHHHT-TTSCEEHHHHHHHC----TTBCHHHHHHHHHHHHHHTSEEEEEEEEETTEEEEEEEECTTTTTS
T ss_pred HHHHHHHHH-HhCCCCHHHHHHHh----cCCCHHHHHHHHHHHHHCCCeEEEEeecccCcceeEEEeccccccC
Confidence 455666655 57899999999998 7 88889999999999999998655321 12358888765433
No 427
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=89.13 E-value=1.5 Score=33.82 Aligned_cols=88 Identities=20% Similarity=0.143 Sum_probs=53.3
Q ss_pred cceEEEecCCc-cHHHHHHHHhcCCCceEEEeec-hhHHhhCCCCCCceEEeCCCCCC--C-----CCCceeeehhhhhc
Q 021707 161 VKRLVDVGGSA-GDCLRMILQKHHFICEGINFDL-PEVVGEAPSIPGVTHIGGDMFNS--I-----PAANAIFMKWVLAT 231 (309)
Q Consensus 161 ~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~~ri~~~~~d~~~~--~-----p~~D~i~~~~vlh~ 231 (309)
..+|+=+|+|. |......+... +.+ ++++|. ++.++.+++ ..+.++.+|..++ + ..+|+++...-
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~-g~~-v~vid~~~~~~~~~~~-~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~--- 80 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS-DIP-LVVIETSRTRVDELRE-RGVRAVLGNAANEEIMQLAHLECAKWLILTIP--- 80 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-TCC-EEEEESCHHHHHHHHH-TTCEEEESCTTSHHHHHHTTGGGCSEEEECCS---
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCC-EEEEECCHHHHHHHHH-cCCCEEECCCCCHHHHHhcCcccCCEEEEECC---
Confidence 35788898863 44444444332 567 999998 555655543 5778899998754 1 23587775532
Q ss_pred CChhHHHHHHHHHHHhcCCCcEEEE
Q 021707 232 WTDDECKLIMENCYKALLAGGKLIA 256 (309)
Q Consensus 232 ~~d~~~~~iL~~~~~aL~pgG~l~i 256 (309)
++.++..+.. ..+.+.|+.+++.
T Consensus 81 -~~~~n~~~~~-~a~~~~~~~~iia 103 (140)
T 3fwz_A 81 -NGYEAGEIVA-SARAKNPDIEIIA 103 (140)
T ss_dssp -CHHHHHHHHH-HHHHHCSSSEEEE
T ss_pred -ChHHHHHHHH-HHHHHCCCCeEEE
Confidence 2334444444 4555678877664
No 428
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=89.09 E-value=0.59 Score=37.35 Aligned_cols=120 Identities=15% Similarity=0.152 Sum_probs=67.0
Q ss_pred HHHHHHHHhhcCCcccHHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-----hhHHhhCCCCCCc
Q 021707 132 MNGLMRRAISGVSVPFMTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-----PEVVGEAPSIPGV 206 (309)
Q Consensus 132 ~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-----p~~~~~a~~~~ri 206 (309)
..+.|-+.|.+.... ......... .-..-|+|+|=|+|..=-.+.+.+|+-. +.++|. |+.+. +.=
T Consensus 15 RLDsfirRltaQR~~-L~~a~~~v~--~~~GpVlElGLGNGRTydHLRe~~P~R~-I~vfDR~~~~hp~~~P-----~~e 85 (174)
T 3iht_A 15 RLDLFIDRMVSQRAC-LEHAIAQTA--GLSGPVYELGLGNGRTYHHLRQHVQGRE-IYVFERAVASHPDSTP-----PEA 85 (174)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHHHTT--TCCSCEEEECCTTCHHHHHHHHHCCSSC-EEEEESSCCCCGGGCC-----CGG
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHhc--CCCCceEEecCCCChhHHHHHHhCCCCc-EEEEEeeeccCCCCCC-----chH
Confidence 345666666532221 122223321 2246899999999999999999999999 999997 33222 233
Q ss_pred eEEeCCCCCCCCC------CceeeehhhhhcCChhHHHHHHH----HHHHhcCCCcEEEEeccc
Q 021707 207 THIGGDMFNSIPA------ANAIFMKWVLATWTDDECKLIME----NCYKALLAGGKLIACEPV 260 (309)
Q Consensus 207 ~~~~~d~~~~~p~------~D~i~~~~vlh~~~d~~~~~iL~----~~~~aL~pgG~l~i~e~~ 260 (309)
.++-||+.+.+|. +.+.+...=+-.-..++.....+ -+...|.|||.++-..++
T Consensus 86 ~~ilGdi~~tL~~~~~r~g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~pl 149 (174)
T 3iht_A 86 QLILGDIRETLPATLERFGATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSDRM 149 (174)
T ss_dssp GEEESCHHHHHHHHHHHHCSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESSCC
T ss_pred heecccHHHHHHHHHHhcCCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCCcc
Confidence 5566666543222 12232222221112222223333 345667899977766665
No 429
>3hhh_A Transcriptional regulator, PADR family; PF03551, structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.70A {Enterococcus faecalis} SCOP: a.4.5.0
Probab=88.81 E-value=0.32 Score=36.85 Aligned_cols=76 Identities=14% Similarity=0.045 Sum_probs=53.6
Q ss_pred CCcchhhhhhhhhh----cCCCCCCHHHHHHHhCcC--CCCCcchHHHHHHHHHcCCceeeeccc----ccCceEEcChh
Q 021707 1 MEDNECRDGRKKVR----LANTPLSVSQILTCILPS--GGGDAENLQCILRLLTSYGVFSEHREF----RGERKYSLTEI 70 (309)
Q Consensus 1 ~~~~~~~~g~~~~~----l~~~~~t~~eLA~~~~~~--~g~~~~~l~rlL~~L~~~gll~~~~~~----~~~~~y~~t~~ 70 (309)
|.+++..-|..+.. |.++|.+--||++.+... -++++..+...|+-|...|+|+..... ...-.|++|+.
T Consensus 4 m~~~~l~~g~l~~~IL~lL~~~p~~Gyei~~~l~~~g~~~is~gtlY~~L~rLe~~GlI~~~~~~~~~g~~rk~Y~lT~~ 83 (116)
T 3hhh_A 4 MKQTELLKGILEGLVLAIIQRKETYGYEITKILNDQGFTEIVEGTVYTILLRLEKNQWVIAEKKPSEKGPMRKFYRLTSS 83 (116)
T ss_dssp -CHHHHHTTHHHHHHHHHHHHSCBCHHHHHHHHHTTSCSSCCHHHHHHHHHHHHHTTSEEEEEEECC--CEEEEEEECHH
T ss_pred ccHHHHHhhhHHHHHHHHHhcCCCCHHHHHHHHHHcCCCCCCccHHHHHHHHHHHCCCEEEEeeecCCCCCceEEEECHH
Confidence 45566666666654 357899999999997111 046889999999999999999875321 00125999999
Q ss_pred chhhhc
Q 021707 71 GKSLVT 76 (309)
Q Consensus 71 ~~~l~~ 76 (309)
|+..+.
T Consensus 84 G~~~l~ 89 (116)
T 3hhh_A 84 GEAELA 89 (116)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 976554
No 430
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=88.53 E-value=1.2 Score=39.17 Aligned_cols=80 Identities=13% Similarity=0.116 Sum_probs=49.5
Q ss_pred CcceEEEecCCccHHHHHHHHhcCCCceEEEeechhHHhhCCCCCCceEEeCCCCCCCC---C-CceeeehhhhhcCChh
Q 021707 160 GVKRLVDVGGSAGDCLRMILQKHHFICEGINFDLPEVVGEAPSIPGVTHIGGDMFNSIP---A-ANAIFMKWVLATWTDD 235 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~p~~~~~a~~~~ri~~~~~d~~~~~p---~-~D~i~~~~vlh~~~d~ 235 (309)
++..|+-||||.|.+..-|.+.+|+.. .+++|+.-|-....+ . .++.+.... + ++
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f-----------------~~ikWvLiDPap~~~~l~~~~NV~li~~f---v-de 118 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLG-----------------VIIKWMLIDGRHHDPILNGLRDVTLVTRF---V-DE 118 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTT-----------------CCCEEEEEESSCCCGGGTTCTTEEEEECC---C-CH
T ss_pred CCcEEEEecccCccHHHHHHHhchhhC-----------------CCeEEEEEcCCcchhhhcCCCcEEEEecc---C-CH
Confidence 356999999999999999999999864 456666655521111 1 244444332 2 33
Q ss_pred HHHHHHHHHHHhcCCCcEEEEeccccCC
Q 021707 236 ECKLIMENCYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 236 ~~~~iL~~~~~aL~pgG~l~i~e~~~~~ 263 (309)
.. +++.++.+.....|+|.|.-...
T Consensus 119 ~d---l~~l~~~~~~~~iLLISDIRS~r 143 (307)
T 3mag_A 119 EY---LRSIKKQLHPSKIILISDVRSKR 143 (307)
T ss_dssp HH---HHHHHHHHTTSCEEEEECCCC--
T ss_pred HH---HHHHHHhccCCCEEEEEEecCCC
Confidence 22 34455555667788888876654
No 431
>2p5v_A Transcriptional regulator, LRP/ASNC family; NMB0573, structu genomics; 1.99A {Neisseria meningitidis} PDB: 2p6s_A 2p6t_A
Probab=88.36 E-value=0.47 Score=37.86 Aligned_cols=46 Identities=13% Similarity=0.026 Sum_probs=39.8
Q ss_pred hhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeec
Q 021707 8 DGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 8 ~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
..+.+.+-.+++.|..|||+.+ |+++..+.+.++.|...|++....
T Consensus 13 ~~il~~L~~~~~~s~~ela~~l----g~s~~tv~~~l~~L~~~G~i~~~~ 58 (162)
T 2p5v_A 13 IKILQVLQENGRLTNVELSERV----ALSPSPCLRRLKQLEDAGIVRQYA 58 (162)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHH----TSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHcCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEeeec
Confidence 3455555567899999999999 999999999999999999998653
No 432
>2qq9_A Diphtheria toxin repressor; regulator, DTXR, helix-turn-helix, metal ION, ACT DNA-binding, ferrous iron, transcription; 1.71A {Corynebacterium diphtheriae} PDB: 2tdx_A 1ddn_A 1g3t_A 1g3s_A 1g3w_A 2qqa_A 2qqb_A 2dtr_A 1bi0_A 1bi2_A 1bi3_A 1dpr_A 1bi1_A 1fwz_A 1g3y_A 1c0w_A* 3glx_A 1p92_A 1xcv_A 1f5t_A ...
Probab=88.21 E-value=0.57 Score=39.72 Aligned_cols=50 Identities=14% Similarity=0.205 Sum_probs=43.5
Q ss_pred CCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhc
Q 021707 19 PLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 19 ~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~ 76 (309)
+.+..+||+.+ ++++..+.++++.|...|++.+.. +..+.+|+.|+.+..
T Consensus 24 ~~~~~~la~~l----~vs~~tvs~~l~~Le~~GlV~r~~----~~~v~LT~~G~~~~~ 73 (226)
T 2qq9_A 24 TPLRARIAERL----EQSGPTVSQTVARMERDGLVVVAS----DRSLQMTPTGRTLAT 73 (226)
T ss_dssp CCBHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEECT----TSBEEECHHHHHHHH
T ss_pred CccHHHHHHHH----CCCHHHHHHHHHHHHHCCCEEEeC----CCCeEECHHHHHHHH
Confidence 33559999999 999999999999999999999986 567999999976554
No 433
>1fx7_A Iron-dependent repressor IDER; DTXR, iron-dependent regulator, signaling protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.4.5.24 a.76.1.1 b.34.1.2 PDB: 1u8r_A
Probab=87.87 E-value=0.48 Score=40.27 Aligned_cols=50 Identities=16% Similarity=0.272 Sum_probs=43.8
Q ss_pred CCCH--HHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhc
Q 021707 19 PLSV--SQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 19 ~~t~--~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~ 76 (309)
+.|. .+||+.+ ++++..+.+.|+.|...|+|++.. +..+.+|+.+..+..
T Consensus 22 ~~~~~~~~La~~l----~vs~~tvs~~l~~Le~~GlV~r~~----~~~v~LT~~G~~~~~ 73 (230)
T 1fx7_A 22 GVTPLRARIAERL----DQSGPTVSQTVSRMERDGLLRVAG----DRHLELTEKGRALAI 73 (230)
T ss_dssp TSCCCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEECT----TSCEEECHHHHHHHH
T ss_pred CCCCcHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEEeC----CccEEECHHHHHHHH
Confidence 4555 9999999 999999999999999999999986 567999999976654
No 434
>3i4p_A Transcriptional regulator, ASNC family; PSI, structural genom protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens str}
Probab=87.63 E-value=0.54 Score=37.60 Aligned_cols=45 Identities=11% Similarity=0.150 Sum_probs=40.0
Q ss_pred hhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeee
Q 021707 8 DGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEH 56 (309)
Q Consensus 8 ~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~ 56 (309)
..+.+.+-.++++|..|||+.+ |+++..+.+-++.|...|++...
T Consensus 6 ~~il~~L~~~~~~s~~~la~~l----g~s~~tv~~rl~~L~~~g~i~~~ 50 (162)
T 3i4p_A 6 RKILRILQEDSTLAVADLAKKV----GLSTTPCWRRIQKMEEDGVIRRR 50 (162)
T ss_dssp HHHHHHHTTCSCSCHHHHHHHH----TCCHHHHHHHHHHHHHTTSSCCC
T ss_pred HHHHHHHHHCCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCeeec
Confidence 3456666678999999999999 99999999999999999999865
No 435
>2cg4_A Regulatory protein ASNC; DNA binding, FFRP, LRP family, transcription, DNA- binding, transcription regulation; 2.4A {Escherichia coli} SCOP: a.4.5.32 d.58.4.2
Probab=87.33 E-value=0.46 Score=37.42 Aligned_cols=45 Identities=11% Similarity=0.231 Sum_probs=39.6
Q ss_pred hhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeee
Q 021707 8 DGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEH 56 (309)
Q Consensus 8 ~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~ 56 (309)
..+.+.+-.+++.|..|||+.+ |+++..+.+.++.|...|++...
T Consensus 11 ~~il~~L~~~~~~s~~ela~~l----g~s~~tv~~~l~~L~~~G~i~~~ 55 (152)
T 2cg4_A 11 RGILEALMGNARTAYAELAKQF----GVSPETIHVRVEKMKQAGIITGA 55 (152)
T ss_dssp HHHHHHHHHCTTSCHHHHHHHH----TSCHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHcCCCCHHHHHHHH----CcCHHHHHHHHHHHHHcCCcceE
Confidence 3455656567899999999999 99999999999999999999865
No 436
>3cta_A Riboflavin kinase; structural genomics, transferase, PSI-2, protein structure initiative; 2.20A {Thermoplasma acidophilum dsm 1728} SCOP: a.4.5.28 b.43.5.2
Probab=87.17 E-value=0.47 Score=40.27 Aligned_cols=56 Identities=16% Similarity=0.175 Sum_probs=46.4
Q ss_pred CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhcC
Q 021707 17 NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVTD 77 (309)
Q Consensus 17 ~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~~ 77 (309)
+++.|..++|+.+ ++++..+.+.++.|...|+|++.... ....+++|+.|+.+...
T Consensus 25 ~~~~s~s~aA~~L----~isq~avSr~I~~LE~~~L~~R~~~~-R~~~v~LT~~G~~l~~~ 80 (230)
T 3cta_A 25 RAYLTSSKLADML----GISQQSASRIIIDLEKNGYITRTVTK-RGQILNITEKGLDVLYT 80 (230)
T ss_dssp EEECCHHHHHHHH----TSCHHHHHHHHHHHHHTTSEEEEEET-TEEEEEECHHHHHHHHH
T ss_pred CCCcCHHHHHHHH----CCCHHHHHHHHHHHHHCCCEEEEEcC-CeEEEEECHHHHHHHHH
Confidence 4578999999999 99999999999999999999987311 12579999999877653
No 437
>2cyy_A Putative HTH-type transcriptional regulator PH151; structural genomics, pyrococcus horikosii OT3, NPPSFA; HET: MSE GLN; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2
Probab=87.10 E-value=0.36 Score=38.04 Aligned_cols=45 Identities=16% Similarity=0.160 Sum_probs=39.4
Q ss_pred hhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeee
Q 021707 8 DGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEH 56 (309)
Q Consensus 8 ~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~ 56 (309)
..+.+.+-.+++.|..|||+.+ |+++..+.+.++.|...|++...
T Consensus 10 ~~il~~L~~~~~~s~~ela~~l----g~s~~tv~~~l~~L~~~G~i~~~ 54 (151)
T 2cyy_A 10 KKIIKILQNDGKAPLREISKIT----GLAESTIHERIRKLRESGVIKKF 54 (151)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHH----CSCHHHHHHHHHHHHHHTSSCCC
T ss_pred HHHHHHHHHcCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCeEEE
Confidence 3455656567899999999999 99999999999999999999865
No 438
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=86.99 E-value=0.67 Score=40.84 Aligned_cols=99 Identities=15% Similarity=0.034 Sum_probs=71.6
Q ss_pred cceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC----CCceEEeCCCCCC----CCC---Cceeeehhh
Q 021707 161 VKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI----PGVTHIGGDMFNS----IPA---ANAIFMKWV 228 (309)
Q Consensus 161 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~----~ri~~~~~d~~~~----~p~---~D~i~~~~v 228 (309)
...++|+=+|+|.++.++++. .-+ ++.+|. +..++..+++ ++++++..|.++. .|. .|+|++==.
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~--~d~-~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPP 168 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS--QDR-LYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPS 168 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT--TSE-EEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCC
T ss_pred CCCceeEeCCcHHHHHHHcCC--CCe-EEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCC
Confidence 457899999999999999983 445 999998 6666655543 6899999997652 232 488887432
Q ss_pred hhcCChhHHHHHHHHHHHhc--CCCcEEEEeccccCCC
Q 021707 229 LATWTDDECKLIMENCYKAL--LAGGKLIACEPVLLDD 264 (309)
Q Consensus 229 lh~~~d~~~~~iL~~~~~aL--~pgG~l~i~e~~~~~~ 264 (309)
... .++..++++.+.+.. .|+|.++|.=++.+..
T Consensus 169 Ye~--k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~~ 204 (283)
T 2oo3_A 169 YER--KEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKA 204 (283)
T ss_dssp CCS--TTHHHHHHHHHHHHHHHCTTSEEEEEEEESSHH
T ss_pred CCC--CcHHHHHHHHHHHhCccCCCeEEEEEEeccchH
Confidence 221 235567777777654 5899999998888765
No 439
>1sfu_A 34L protein; protein/Z-DNA complex, DNA binding protein/DNA complex; 2.00A {Yaba-like disease virus} SCOP: a.4.5.19
Probab=86.98 E-value=0.68 Score=32.15 Aligned_cols=56 Identities=7% Similarity=-0.085 Sum_probs=42.2
Q ss_pred hhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcCh
Q 021707 8 DGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTE 69 (309)
Q Consensus 8 ~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~ 69 (309)
..++.-+-.++..|+.+||.++ |++...+.|.|.-|...|.|...++ .+-.|+.+.
T Consensus 18 ~~~i~~L~~~~~~Ta~~IAkkL----g~sK~~vNr~LY~L~kkG~V~~~~~--~PP~W~~~~ 73 (75)
T 1sfu_A 18 KKEVLSLNTNDYTTAISLSNRL----KINKKKINQQLYKLQKEDTVKMVPS--NPPKWFKNY 73 (75)
T ss_dssp HHHHHTSCTTCEECHHHHHHHT----TCCHHHHHHHHHHHHHTTSEEEECC--SSCEEEECT
T ss_pred HHHHHhCCCCcchHHHHHHHHH----CCCHHHHHHHHHHHHHCCCEecCCC--CCCCccCCC
Confidence 3444433333459999999999 9999999999999999999987752 144666553
No 440
>2dbb_A Putative HTH-type transcriptional regulator PH006; ASNC family, helix-turn-helix (HTH) domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=86.92 E-value=0.41 Score=37.67 Aligned_cols=46 Identities=11% Similarity=0.164 Sum_probs=39.7
Q ss_pred hhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeec
Q 021707 8 DGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 8 ~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
..+.+.+-.+++.|..|||+.+ |+++..+.+.++.|...|++....
T Consensus 12 ~~il~~L~~~~~~s~~ela~~l----g~s~~tv~~~l~~L~~~G~i~~~~ 57 (151)
T 2dbb_A 12 MQLVKILSENSRLTYRELADIL----NTTRQRIARRIDKLKKLGIIRKFT 57 (151)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHT----TSCHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHHcCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEEEE
Confidence 3455555567899999999999 999999999999999999998653
No 441
>2e1c_A Putative HTH-type transcriptional regulator PH151; DNA-binding, transcriptional regulatory protein, archaeal; HET: DNA; 2.10A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2 PDB: 1ri7_A* 2zny_A* 2znz_A*
Probab=86.89 E-value=0.45 Score=38.60 Aligned_cols=45 Identities=16% Similarity=0.160 Sum_probs=39.1
Q ss_pred hhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeee
Q 021707 8 DGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEH 56 (309)
Q Consensus 8 ~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~ 56 (309)
..+.+.+-.+++.|..|||+.+ |+++..+.+-|+.|...|++...
T Consensus 30 ~~IL~~L~~~~~~s~~eLA~~l----glS~~tv~~rl~~L~~~G~I~~~ 74 (171)
T 2e1c_A 30 KKIIKILQNDGKAPLREISKIT----GLAESTIHERIRKLRESGVIKKF 74 (171)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHH----TSCHHHHHHHHHHHHHTTSSCCC
T ss_pred HHHHHHHHHcCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCeEee
Confidence 3455555567899999999999 99999999999999999999865
No 442
>2v79_A DNA replication protein DNAD; primosome, DNA-binding protein; HET: DNA; 2.00A {Bacillus subtilis}
Probab=86.87 E-value=0.39 Score=37.46 Aligned_cols=35 Identities=14% Similarity=0.067 Sum_probs=33.0
Q ss_pred CCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeee
Q 021707 18 TPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEH 56 (309)
Q Consensus 18 ~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~ 56 (309)
...|.++||+.+ |+++..+.++|.-|...|++...
T Consensus 50 ~~ps~~~LA~~~----~~s~~~v~~~L~~L~~KGlI~i~ 84 (135)
T 2v79_A 50 YFPTPNQLQEGM----SISVEECTNRLRMFIQKGFLFIE 84 (135)
T ss_dssp CSCCHHHHHTTS----SSCHHHHHHHHHHHHHHTSCEEE
T ss_pred CCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEEE
Confidence 568999999999 99999999999999999999984
No 443
>2p4w_A Transcriptional regulatory protein ARSR family; archaea, PHR, heat shock, transcriptional regulation, winged DNA binding; 2.60A {Pyrococcus furiosus} SCOP: a.4.5.64
Probab=86.86 E-value=0.5 Score=39.51 Aligned_cols=60 Identities=20% Similarity=0.200 Sum_probs=45.7
Q ss_pred hhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeeccc----ccCceEEcChhc
Q 021707 7 RDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREF----RGERKYSLTEIG 71 (309)
Q Consensus 7 ~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~----~~~~~y~~t~~~ 71 (309)
.+.++.++ .++|.|+.|||+.+ |+++..+.+.|+.|...|+|...... ...-.|++|+.+
T Consensus 17 rl~IL~~L-~~~~~s~~eLa~~l----~is~stvs~hLk~Le~~GLV~~~~~~~~~g~~~~~Y~Lt~~~ 80 (202)
T 2p4w_A 17 RRRILFLL-TKRPYFVSELSREL----GVGQKAVLEHLRILEEAGLIESRVEKIPRGRPRKYYMIKKGL 80 (202)
T ss_dssp HHHHHHHH-HHSCEEHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEECCBTTBCCCEEEEECTTE
T ss_pred HHHHHHHH-HhCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCceEEEeeccCCCCceEEEEEChHH
Confidence 34445544 57899999999999 99999999999999999999876421 112257777655
No 444
>2ia0_A Putative HTH-type transcriptional regulator PF086; ASNC, PSI, structural genomics, southeast collaboratory for structural genomics; 2.37A {Pyrococcus furiosus}
Probab=86.65 E-value=0.55 Score=38.03 Aligned_cols=44 Identities=11% Similarity=0.191 Sum_probs=38.5
Q ss_pred hhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeee
Q 021707 9 GRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEH 56 (309)
Q Consensus 9 g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~ 56 (309)
.+.+.+-.+++.|..|||+.+ |+++..+.+.++.|...|++...
T Consensus 21 ~IL~~L~~~~~~s~~eLA~~l----glS~~tv~~~l~~L~~~G~I~~~ 64 (171)
T 2ia0_A 21 NILRLLKKDARLTISELSEQL----KKPESTIHFRIKKLQERGVIERY 64 (171)
T ss_dssp HHHHHHHHCTTCCHHHHHHHH----TSCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHcCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEee
Confidence 445555567899999999999 99999999999999999999765
No 445
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=85.96 E-value=2.6 Score=38.79 Aligned_cols=74 Identities=15% Similarity=0.217 Sum_probs=43.7
Q ss_pred chHHHHHHHHhhcCCcccHHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhc-------CCCceEEEeechhHHhhCC-
Q 021707 130 PEMNGLMRRAISGVSVPFMTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKH-------HFICEGINFDLPEVVGEAP- 201 (309)
Q Consensus 130 ~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-------p~~~~~~~~D~p~~~~~a~- 201 (309)
|++...|.+..+.+. .+ +.+... .+..-.|+++|+|+|.++..+++.. ..++ .+++|.+..+...+
T Consensus 55 peis~~FGe~la~~~---~~-~w~~~g-~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~-y~iVE~Sp~Lr~~Q~ 128 (387)
T 1zkd_A 55 PEISQMFGELLGLWS---AS-VWKAAD-EPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLS-VHLVEINPVLRQKQQ 128 (387)
T ss_dssp HHHCHHHHHHHHHHH---HH-HHHHTT-CCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEE-EEEECCCHHHHHHHH
T ss_pred CchHHHHHHHHHHHH---HH-HHHHcC-CCCCcEEEEECCCcchHHHHHHHHHHhCCccccccE-EEEEecCHHHHHHHH
Confidence 455556666554211 11 122222 3445689999999999999888652 2346 89999855444322
Q ss_pred ----CCCCceEE
Q 021707 202 ----SIPGVTHI 209 (309)
Q Consensus 202 ----~~~ri~~~ 209 (309)
..++|++.
T Consensus 129 ~~L~~~~~v~W~ 140 (387)
T 1zkd_A 129 TLLAGIRNIHWH 140 (387)
T ss_dssp HHSTTCSSEEEE
T ss_pred HHhcCCCCeEEe
Confidence 22356665
No 446
>1uly_A Hypothetical protein PH1932; helix-turn-helix, structural genomics, DNA binding protein; 2.50A {Pyrococcus horikoshii} SCOP: a.4.5.58 PDB: 2cwe_A
Probab=85.88 E-value=0.9 Score=37.57 Aligned_cols=43 Identities=16% Similarity=0.228 Sum_probs=38.0
Q ss_pred hhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeee
Q 021707 9 GRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEH 56 (309)
Q Consensus 9 g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~ 56 (309)
.+...+. +++.|..|||+.+ |+++..+.+-++.|...|++...
T Consensus 24 ~IL~~L~-~~~~s~~eLA~~l----glS~stv~~~l~~Le~~GlI~~~ 66 (192)
T 1uly_A 24 KILKLLR-NKEMTISQLSEIL----GKTPQTIYHHIEKLKEAGLVEVK 66 (192)
T ss_dssp HHHHHHT-TCCBCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHH-cCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEEE
Confidence 3455454 7899999999999 99999999999999999999876
No 447
>2fbk_A Transcriptional regulator, MARR family; winged-helix-turn-helix; 2.30A {Deinococcus radiodurans} SCOP: a.4.5.28
Probab=85.80 E-value=0.29 Score=39.65 Aligned_cols=53 Identities=19% Similarity=0.202 Sum_probs=42.3
Q ss_pred CCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 20 LSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 20 ~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
+|..+||+.+ ++++..+.++++.|...|+|.+... |...-.+.+|+.+..+..
T Consensus 87 ~t~~eLa~~l----~is~~tvs~~l~~Le~~GlV~r~~~~~DrR~~~~~LT~~G~~~~~ 141 (181)
T 2fbk_A 87 LRPTELSALA----AISGPSTSNRIVRLLEKGLIERREDERDRRSASIRLTPQGRALVT 141 (181)
T ss_dssp BCHHHHHHHC----SCCSGGGSSHHHHHHHHTSEECCC-------CCBEECHHHHHHHH
T ss_pred CCHHHHHHHH----CCCHHHHHHHHHHHHHCcCEEecCCCCCCCeeEEEECHHHHHHHH
Confidence 9999999999 9999999999999999999988641 111225888888876654
No 448
>2qlz_A Transcription factor PF0095; 2.50A {Pyrococcus furiosus} PDB: 2quf_A
Probab=85.76 E-value=0.27 Score=42.11 Aligned_cols=61 Identities=13% Similarity=0.122 Sum_probs=46.1
Q ss_pred hhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceee-eccccc----CceEEcChhch
Q 021707 7 RDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSE-HREFRG----ERKYSLTEIGK 72 (309)
Q Consensus 7 ~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~-~~~~~~----~~~y~~t~~~~ 72 (309)
+..++..+ .++|.|+.|||+.+ |+++..+.+.|+.|...|+|.. ...+.. .-.|++++.+.
T Consensus 14 R~~IL~~L-~~g~~s~~ELa~~l----glS~stVs~hL~~Le~aGLV~~~~~~gr~~GRp~~~Y~Lt~~~~ 79 (232)
T 2qlz_A 14 RRDLLSHL-TCMECYFSLLSSKV----SVSSTAVAKHLKIMEREGVLQSYEKEERFIGPTKKYYKISIAKS 79 (232)
T ss_dssp HHHHHHHH-TTTTTCSSSSCTTC----CCCHHHHHHHHHHHHHTTSEEEEEECC-----CEEEEEECCCEE
T ss_pred HHHHHHHH-HhCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEEeeecCCCCCCccEEEEEccchh
Confidence 34455555 46899999999999 9999999999999999999988 321100 12488887664
No 449
>1i1g_A Transcriptional regulator LRPA; helix-turn-helix, LRP/ASNC family; 2.90A {Pyrococcus furiosus} SCOP: a.4.5.32 d.58.4.2
Probab=85.68 E-value=0.44 Score=36.84 Aligned_cols=45 Identities=9% Similarity=0.079 Sum_probs=38.4
Q ss_pred hhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeec
Q 021707 9 GRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 9 g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
.+...+-.+++.|..|||+.+ |+++..+.+.++.|...|++....
T Consensus 8 ~il~~L~~~~~~~~~ela~~l----g~s~~tv~~~l~~L~~~G~i~~~~ 52 (141)
T 1i1g_A 8 IILEILEKDARTPFTEIAKKL----GISETAVRKRVKALEEKGIIEGYT 52 (141)
T ss_dssp HHHHHHHHCTTCCHHHHHHHH----TSCHHHHHHHHHHHHHHTSSCCCC
T ss_pred HHHHHHHHcCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEeccc
Confidence 344545457889999999999 999999999999999999997653
No 450
>2g9w_A Conserved hypothetical protein; DNA-binding domain, bacterial transcription repressor, DNA B protein; 1.80A {Mycobacterium tuberculosis} SCOP: a.4.5.39
Probab=85.63 E-value=0.71 Score=35.74 Aligned_cols=47 Identities=13% Similarity=0.149 Sum_probs=39.3
Q ss_pred hhhhhhhhcC-CCCCCHHHHHHHhCcCCC----CCcchHHHHHHHHHcCCceeeec
Q 021707 7 RDGRKKVRLA-NTPLSVSQILTCILPSGG----GDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 7 ~~g~~~~~l~-~~~~t~~eLA~~~~~~~g----~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
+..+...+-. ++++|..||++.+ + ++...+.++|+-|...|+|.+..
T Consensus 11 e~~vL~~L~~~~~~~t~~el~~~l----~~~~~~~~~Tvt~~l~rLe~kGlv~r~~ 62 (138)
T 2g9w_A 11 ERAVMDHLWSRTEPQTVRQVHEAL----SARRDLAYTTVMAVLQRLAKKNLVLQIR 62 (138)
T ss_dssp HHHHHHHHHTCSSCEEHHHHHHHH----TTTCCCCHHHHHHHHHHHHHTTSEEEEC
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHH----hccCCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 3444555555 5899999999999 7 78899999999999999999875
No 451
>1bia_A BIRA bifunctional protein; transcription regulation; 2.30A {Escherichia coli} SCOP: a.4.5.1 b.34.1.1 d.104.1.2 PDB: 1bib_A* 1hxd_A* 2ewn_A*
Probab=85.58 E-value=1.2 Score=39.83 Aligned_cols=58 Identities=17% Similarity=0.078 Sum_probs=46.1
Q ss_pred hhhhhhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcCh
Q 021707 5 ECRDGRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTE 69 (309)
Q Consensus 5 ~~~~g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~ 69 (309)
+-+.-+.+++..+++.|.+|||+.+ ++++..++|-|+.|...|++.+... ...|++.+
T Consensus 5 ~r~~~Il~~L~~~~~~s~~eLa~~l----~vS~~ti~r~l~~L~~~G~~i~~~~---g~GY~l~~ 62 (321)
T 1bia_A 5 TVPLKLIALLANGEFHSGEQLGETL----GMSRAAINKHIQTLRDWGVDVFTVP---GKGYSLPE 62 (321)
T ss_dssp HHHHHHHHHHTTSSCBCHHHHHHHH----TSCHHHHHHHHHHHHHTTCCCEEET---TTEEECSS
T ss_pred hHHHHHHHHHHcCCCcCHHHHHHHH----CCCHHHHHHHHHHHHhCCCcEEEec---CCCcEEee
Confidence 3445566766667799999999999 9999999999999999999865431 33687764
No 452
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=85.26 E-value=1.3 Score=34.62 Aligned_cols=64 Identities=9% Similarity=0.056 Sum_probs=45.4
Q ss_pred hhhhhhhhhhcC-CCCCCHHHHHHHhCcCC-CCCcchHHHHHHHHHcCCceeeecccccCceEEcC
Q 021707 5 ECRDGRKKVRLA-NTPLSVSQILTCILPSG-GGDAENLQCILRLLTSYGVFSEHREFRGERKYSLT 68 (309)
Q Consensus 5 ~~~~g~~~~~l~-~~~~t~~eLA~~~~~~~-g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t 68 (309)
.-+..+++.+.. +++.|++||.+.+.... +++...+.|.|+.|+..|+|.+...+.+..+|.++
T Consensus 22 ~qR~~Il~~L~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~~~~~~~~~~~Y~~~ 87 (145)
T 2fe3_A 22 PQRHAILEYLVNSMAHPTADDIYKALEGKFPNMSVATVYNNLRVFRESGLVKELTYGDASSRFDFV 87 (145)
T ss_dssp HHHHHHHHHHHHCSSCCCHHHHHHHHGGGCTTCCHHHHHHHHHHHHHTTSEEEECCTTSCCEEEEC
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCChhhHHHHHHHHHHCCCEEEEeeCCCceEEECC
Confidence 334556666654 57999999999982221 57788999999999999999887532112357654
No 453
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=85.19 E-value=2.4 Score=37.73 Aligned_cols=89 Identities=10% Similarity=0.071 Sum_probs=54.3
Q ss_pred ceEEEecCCc--cHHHHHHHHhcCCCceEEEeec-hhHHhhCCCCCCceEEeCCCCC-CCCCCceeeehhhhhcCChhHH
Q 021707 162 KRLVDVGGSA--GDCLRMILQKHHFICEGINFDL-PEVVGEAPSIPGVTHIGGDMFN-SIPAANAIFMKWVLATWTDDEC 237 (309)
Q Consensus 162 ~~vlDvG~G~--G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~~ri~~~~~d~~~-~~p~~D~i~~~~vlh~~~d~~~ 237 (309)
.+|.=||+|. +.++..+.+.....+ +++.|. ++.++.+.+..-+.-...|..+ ....+|+|++.- |+...
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~-V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilav-----p~~~~ 107 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGK-IYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSS-----PVRTF 107 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSE-EEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECS-----CGGGH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeC-----CHHHH
Confidence 5788898772 334555555543336 899998 4455544433222222334433 344569988764 44556
Q ss_pred HHHHHHHHHhcCCCcEEEE
Q 021707 238 KLIMENCYKALLAGGKLIA 256 (309)
Q Consensus 238 ~~iL~~~~~aL~pgG~l~i 256 (309)
.++++++...++|+..++-
T Consensus 108 ~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 108 REIAKKLSYILSEDATVTD 126 (314)
T ss_dssp HHHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHhhccCCCcEEEE
Confidence 7889999999998875443
No 454
>2pjp_A Selenocysteine-specific elongation factor; SELB, protein-RNA complex, elongation factor, winged- helix, bulge, translation/RNA complex; 2.30A {Escherichia coli}
Probab=85.12 E-value=0.82 Score=34.68 Aligned_cols=48 Identities=17% Similarity=0.271 Sum_probs=40.8
Q ss_pred CCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhc
Q 021707 16 ANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIG 71 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~ 71 (309)
...|.++.+||+.+ ++++..+..||+.|...|.+.... ++.|.++..-
T Consensus 17 ~~~p~~~~~la~~~----~~~~~~~~~~l~~l~~~G~l~~i~----~~~~~~~~~~ 64 (121)
T 2pjp_A 17 GDEPWWVRDLAKET----GTDEQAMRLTLRQAAQQGIITAIV----KDRYYRNDRI 64 (121)
T ss_dssp SSSCEEHHHHHHHT----TCCHHHHHHHHHHHHHTTSEEEEE----TTEEEEHHHH
T ss_pred HhCCCCHHHHHHHh----CCCHHHHHHHHHHHHHCCCEEEec----CCceECHHHH
Confidence 34778999999999 999999999999999999998886 6677766533
No 455
>2lnb_A Z-DNA-binding protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, immune system; NMR {Homo sapiens}
Probab=84.48 E-value=1.1 Score=31.24 Aligned_cols=51 Identities=14% Similarity=0.126 Sum_probs=43.4
Q ss_pred hhhhhcC-CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcC
Q 021707 10 RKKVRLA-NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLT 68 (309)
Q Consensus 10 ~~~~~l~-~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t 68 (309)
+++.+-. ++|++..|||+.+ |++..-+...|..|-..|.|.... ..+|.++
T Consensus 24 VLe~LkeaG~PlkageIae~~----GvdKKeVdKaik~LKkEgkI~SPk----RCyw~~~ 75 (80)
T 2lnb_A 24 ILQVLTEAGSPVKLAQLVKEC----QAPKRELNQVLYRMKKELKVSLTS----PATWCLG 75 (80)
T ss_dssp HHHHHHHHTSCEEHHHHHHHH----TSCHHHHHHHHHHHHHTTSEEEEE----TTEEEES
T ss_pred HHHHHHHcCCCCCHHHHHHHH----CCCHHHHHHHHHHHHHcCCccCCC----CceeeCC
Confidence 4444432 5799999999999 999999999999999999999886 6788886
No 456
>2qlz_A Transcription factor PF0095; 2.50A {Pyrococcus furiosus} PDB: 2quf_A
Probab=84.35 E-value=0.63 Score=39.82 Aligned_cols=47 Identities=11% Similarity=0.106 Sum_probs=42.8
Q ss_pred cCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcCh
Q 021707 15 LANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTE 69 (309)
Q Consensus 15 l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~ 69 (309)
+.+++.|.++||+.+ |+++.-+...|.-|...|+|+... +|+..+.+
T Consensus 174 l~~~~~t~~~la~~~----~l~~~~V~~~l~~L~~~~~v~~~~----~~~~~~~~ 220 (232)
T 2qlz_A 174 LLNGRATVEELSDRL----NLKEREVREKISEMARFVPVKIIN----DNTVVLDE 220 (232)
T ss_dssp HHSSEEEHHHHHHHH----TCCHHHHHHHHHHHTTTSCEEEET----TTEEEECH
T ss_pred HhcCCCCHHHHHHHh----CcCHHHHHHHHHHHHhcCCeEEec----CCeEEecH
Confidence 568999999999999 999999999999999999998776 78888775
No 457
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=84.30 E-value=11 Score=29.20 Aligned_cols=90 Identities=16% Similarity=0.094 Sum_probs=51.8
Q ss_pred CcceEEEecCCc-cHHHHHHHHhcCCCceEEEeec-hhHHhhCCCCCCceEEeCCCCCC-------CCCCceeeehhhhh
Q 021707 160 GVKRLVDVGGSA-GDCLRMILQKHHFICEGINFDL-PEVVGEAPSIPGVTHIGGDMFNS-------IPAANAIFMKWVLA 230 (309)
Q Consensus 160 ~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~~ri~~~~~d~~~~-------~p~~D~i~~~~vlh 230 (309)
...+|+=+|+|. |......+... +.+ ++++|. ++.++.+++..++.++.+|...+ ...+|+++...
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~-g~~-V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~--- 92 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSS-GHS-VVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFT--- 92 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCE-EEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECS---
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC-CCe-EEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEe---
Confidence 356899998863 44444444443 457 899997 55566665334566777776432 12358777653
Q ss_pred cCChhHHHHHHHHHHHhcCCCcEEEE
Q 021707 231 TWTDDECKLIMENCYKALLAGGKLIA 256 (309)
Q Consensus 231 ~~~d~~~~~iL~~~~~aL~pgG~l~i 256 (309)
++.+....+..+.+.+.|..+++.
T Consensus 93 --~~~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 93 --NDDSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp --SCHHHHHHHHHHHHHTSCCSEEEE
T ss_pred --CCcHHHHHHHHHHHHHCCCCeEEE
Confidence 223334445555566666665554
No 458
>1cf7_A Protein (transcription factor E2F-4); E2F, winged-helix, DNA-binding domain, cell cycle, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: a.4.5.17
Probab=84.23 E-value=0.85 Score=31.80 Aligned_cols=37 Identities=11% Similarity=0.185 Sum_probs=34.7
Q ss_pred CCCCCHHHHHHHhCcCCCC-CcchHHHHHHHHHcCCceeeec
Q 021707 17 NTPLSVSQILTCILPSGGG-DAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 17 ~~~~t~~eLA~~~~~~~g~-~~~~l~rlL~~L~~~gll~~~~ 57 (309)
++.+++.++|+.+ ++ ..+.+..++-+|.++|++++..
T Consensus 28 ~~~i~l~~aa~~L----~v~~kRRiYDI~NVLe~igli~K~~ 65 (76)
T 1cf7_A 28 DGVLDLKLAADTL----AVRQKRRIYDITNVLEGIGLIEKKS 65 (76)
T ss_dssp TTEEEHHHHHHHT----TTCCTHHHHHHHHHHHHHTSEEEEE
T ss_pred CCcCcHHHHHHHh----CCccceehhhHHHHHhHhcceeecC
Confidence 5788999999999 99 8999999999999999999985
No 459
>2esh_A Conserved hypothetical protein TM0937; APC5794, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.4.5.61
Probab=84.03 E-value=0.79 Score=34.57 Aligned_cols=61 Identities=20% Similarity=0.192 Sum_probs=45.2
Q ss_pred CCCCCCHHHHHHHhCcCC--C--CCc-chHHHHHHHHHcCCceeeeccc---ccCceEEcChhchhhhc
Q 021707 16 ANTPLSVSQILTCILPSG--G--GDA-ENLQCILRLLTSYGVFSEHREF---RGERKYSLTEIGKSLVT 76 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~~~--g--~~~-~~l~rlL~~L~~~gll~~~~~~---~~~~~y~~t~~~~~l~~ 76 (309)
.++|.+.-||++.+.... + +++ ..+.+.|+-|...|+|+..... ...-.|++|+.|..+..
T Consensus 23 ~~~~~~gyel~~~l~~~g~~~~~is~~~tly~~L~~Le~~GlI~~~~~~~~~~~r~~Y~LT~~G~~~l~ 91 (118)
T 2esh_A 23 AEKPSHGYELAERLAEFGIEIPGIGHMGNIYRVLADLEESGFLSTEWDTTVSPPRKIYRITPQGKLYLR 91 (118)
T ss_dssp HHSCBCHHHHHHHHHTTCCSSTTCCCCCCHHHHHHHHHHTTSEEEEEECSSSSCEEEEEECHHHHHHHH
T ss_pred HcCCCCHHHHHHHHHHhCCcccCCCCcchHHHHHHHHHHCCCeEEEeecCCCCCceEEEEChHHHHHHH
Confidence 468999999999981100 1 788 9999999999999999876421 01125999999976554
No 460
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=83.98 E-value=1.3 Score=41.01 Aligned_cols=38 Identities=16% Similarity=0.152 Sum_probs=31.1
Q ss_pred CCcceEEEecCCccHHHHHHH-HhcCC-CceEEEeec-hhHH
Q 021707 159 KGVKRLVDVGGSAGDCLRMIL-QKHHF-ICEGINFDL-PEVV 197 (309)
Q Consensus 159 ~~~~~vlDvG~G~G~~~~~l~-~~~p~-~~~~~~~D~-p~~~ 197 (309)
.+...|+|||++.|.++..++ +.++. .+ ++.++. |...
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~-V~afEP~p~~~ 265 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFER-VWMIEPDRINL 265 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSE-EEEECCCHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCE-EEEEcCCHHHH
Confidence 567899999999999999988 66766 67 999997 4433
No 461
>1v4r_A Transcriptional repressor; helix-turn-helix, winged-helix, gene regulation; NMR {Streptomyces} SCOP: a.4.5.6
Probab=83.89 E-value=1 Score=32.89 Aligned_cols=36 Identities=31% Similarity=0.354 Sum_probs=33.0
Q ss_pred CCC-CHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeec
Q 021707 18 TPL-SVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 18 ~~~-t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
..+ |..+||+.+ |++...+++-|..|...|++....
T Consensus 33 ~~lps~~eLa~~~----~vSr~tvr~al~~L~~~Gli~~~~ 69 (102)
T 1v4r_A 33 DTLPSVADIRAQF----GVAAKTVSRALAVLKSEGLVSSRG 69 (102)
T ss_dssp SBCCCHHHHHHHS----SSCTTHHHHHTTTTTTSSCCEEET
T ss_pred CCCcCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEEeC
Confidence 345 999999999 999999999999999999998775
No 462
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=83.89 E-value=2.5 Score=38.74 Aligned_cols=98 Identities=12% Similarity=0.069 Sum_probs=63.8
Q ss_pred ceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCC-CCCceEEeCCCCCC----C-------CCCceeeehhh
Q 021707 162 KRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPS-IPGVTHIGGDMFNS----I-------PAANAIFMKWV 228 (309)
Q Consensus 162 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~-~~ri~~~~~d~~~~----~-------p~~D~i~~~~v 228 (309)
-+++|+-||.|.++..+.+.. .+.+.++|. +..++..+. .+...++++|+.+. + +..|+++...-
T Consensus 3 ~~vidLFsG~GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpP 80 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG--FDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPP 80 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCC
T ss_pred CeEEEEccCcCHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCC
Confidence 379999999999999999885 442468888 444444433 36778888888754 1 23599998776
Q ss_pred hhcCC-------hhHHHHHHHH---HHHhcCCCcEEEEeccccCC
Q 021707 229 LATWT-------DDECKLIMEN---CYKALLAGGKLIACEPVLLD 263 (309)
Q Consensus 229 lh~~~-------d~~~~~iL~~---~~~aL~pgG~l~i~e~~~~~ 263 (309)
+..|+ ++..-.++.. +.+.++| ++++.|.+..=
T Consensus 81 CQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P--~~~v~ENV~gl 123 (376)
T 3g7u_A 81 CQGFSSIGKGNPDDSRNQLYMHFYRLVSELQP--LFFLAENVPGI 123 (376)
T ss_dssp CCTTC-------CHHHHHHHHHHHHHHHHHCC--SEEEEEECTTT
T ss_pred CCCcccccCCCCCCchHHHHHHHHHHHHHhCC--CEEEEecchHh
Confidence 66554 1122233333 3344566 57888877554
No 463
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=83.65 E-value=0.92 Score=39.15 Aligned_cols=49 Identities=14% Similarity=0.053 Sum_probs=35.8
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCC
Q 021707 148 MTSVLDSYNGFKGVKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAP 201 (309)
Q Consensus 148 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~ 201 (309)
...+++.+ -..+..|||..||+|..+.+..+. +.+ ++++|+ |..++.++
T Consensus 202 ~~~~i~~~--~~~~~~vlD~f~GsGtt~~~a~~~--gr~-~ig~e~~~~~~~~~~ 251 (260)
T 1g60_A 202 IERIIRAS--SNPNDLVLDCFMGSGTTAIVAKKL--GRN-FIGCDMNAEYVNQAN 251 (260)
T ss_dssp HHHHHHHH--CCTTCEEEESSCTTCHHHHHHHHT--TCE-EEEEESCHHHHHHHH
T ss_pred HHHHHHHh--CCCCCEEEECCCCCCHHHHHHHHc--CCe-EEEEeCCHHHHHHHH
Confidence 44555554 245679999999999999998877 456 999998 55555443
No 464
>1sd4_A Penicillinase repressor; BLAI, MECI, methicillin, B-lactam, DNA binding PR; 2.00A {Staphylococcus aureus} SCOP: a.4.5.39 PDB: 1xsd_A
Probab=83.27 E-value=0.55 Score=35.42 Aligned_cols=46 Identities=9% Similarity=0.117 Sum_probs=38.3
Q ss_pred hhhhhhhcCCCCCCHHHHHHHhCcCCC----CCcchHHHHHHHHHcCCceeeec
Q 021707 8 DGRKKVRLANTPLSVSQILTCILPSGG----GDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 8 ~g~~~~~l~~~~~t~~eLA~~~~~~~g----~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
..+...+-.++|+|..|||+.+ + +++..+.++|+-|...|+|.+..
T Consensus 13 ~~vL~~L~~~~~~t~~el~~~l----~~~~~~~~~Tvt~~l~rLe~kGlv~R~~ 62 (126)
T 1sd4_A 13 WDVMNIIWDKKSVSANEIVVEI----QKYKEVSDKTIRTLITRLYKKEIIKRYK 62 (126)
T ss_dssp HHHHHHHHHSSSEEHHHHHHHH----HTTSCCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHhcCCCCHHHHHHHH----hhcCCCChhhHHHHHHHHHHCCceEEEe
Confidence 3344445457899999999999 6 57889999999999999999876
No 465
>2b0l_A GTP-sensing transcriptional pleiotropic repressor; CODY, DNA-binding, nucleotide-binding, transcript regulation, winged HTH motif.; 2.90A {Bacillus subtilis} SCOP: a.4.5.66
Probab=82.98 E-value=1 Score=33.11 Aligned_cols=37 Identities=30% Similarity=0.300 Sum_probs=33.4
Q ss_pred CCCC-CHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeec
Q 021707 17 NTPL-SVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 17 ~~~~-t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
++.+ |..+||+.. |++...+++-|+.|...|+|+...
T Consensus 40 g~~lps~~eLa~~l----gVSr~tVr~al~~L~~~GlI~~~~ 77 (102)
T 2b0l_A 40 NEGLLVASKIADRV----GITRSVIVNALRKLESAGVIESRS 77 (102)
T ss_dssp TEEEECHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred CCcCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEEEe
Confidence 3455 999999999 999999999999999999998764
No 466
>1j5y_A Transcriptional regulator, biotin repressor famil; structural genomics, TM1602, BIOT repressor family, JCSG, conserved hypothetical protein; 2.30A {Thermotoga maritima} SCOP: a.4.5.1 d.94.2.1
Probab=82.76 E-value=1.4 Score=36.03 Aligned_cols=54 Identities=17% Similarity=0.159 Sum_probs=42.6
Q ss_pred hhhhhhhcCC-CCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCc-eeeecccccCceEEcChh
Q 021707 8 DGRKKVRLAN-TPLSVSQILTCILPSGGGDAENLQCILRLLTSYGV-FSEHREFRGERKYSLTEI 70 (309)
Q Consensus 8 ~g~~~~~l~~-~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gl-l~~~~~~~~~~~y~~t~~ 70 (309)
..+.+++..+ ++.|..|||+.+ |++.+.++|=++.|...|+ +... .+.|.+.+.
T Consensus 24 ~~Il~~L~~~~~~~s~~eLa~~l----~vS~~Ti~rdi~~L~~~G~~I~~~-----~~Gy~l~~~ 79 (187)
T 1j5y_A 24 KSIVRILERSKEPVSGAQLAEEL----SVSRQVIVQDIAYLRSLGYNIVAT-----PRGYVLAGG 79 (187)
T ss_dssp HHHHHHHHHCSSCBCHHHHHHHH----TSCHHHHHHHHHHHHHHTCCCEEE-----TTEEECCTT
T ss_pred HHHHHHHHHcCCCcCHHHHHHHH----CcCHHHHHHHHHHHHHCCCeEEEE-----CCEEEECCc
Confidence 3455555433 679999999999 9999999999999999999 7654 356877754
No 467
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=82.19 E-value=0.92 Score=41.79 Aligned_cols=45 Identities=9% Similarity=-0.009 Sum_probs=40.2
Q ss_pred hhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeec
Q 021707 9 GRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 9 g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
-+++.+..++++|..|||+.+ |++...+.++++.|...|++.+.+
T Consensus 20 ~il~~l~~~~~~sr~~la~~~----~ls~~tv~~~v~~L~~~g~i~~~~ 64 (406)
T 1z6r_A 20 AVYRLIDQLGPVSRIDLSRLA----QLAPASITKIVHEMLEAHLVQELE 64 (406)
T ss_dssp HHHHHHHSSCSCCHHHHHHHT----TCCHHHHHHHHHHHHHHTSEEEC-
T ss_pred HHHHHHHHcCCcCHHHHHHHH----CCCHHHHHHHHHHHHHCCcEEeec
Confidence 356777788999999999999 999999999999999999998854
No 468
>1mzb_A Ferric uptake regulation protein; ferric uptake regulator, iron, DTXR, gene regulation; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.42
Probab=82.03 E-value=1.8 Score=33.43 Aligned_cols=64 Identities=13% Similarity=0.159 Sum_probs=45.3
Q ss_pred hhhhhhhhhhcC-C-CCCCHHHHHHHhCcCC-CCCcchHHHHHHHHHcCCceeeecccccCceEEcC
Q 021707 5 ECRDGRKKVRLA-N-TPLSVSQILTCILPSG-GGDAENLQCILRLLTSYGVFSEHREFRGERKYSLT 68 (309)
Q Consensus 5 ~~~~g~~~~~l~-~-~~~t~~eLA~~~~~~~-g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t 68 (309)
.-+..+++.+.. + ++.|++||.+.+.... +++..-+.|.|+.|+..|++.+...+.+..+|.++
T Consensus 18 ~qR~~Il~~L~~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~~~~~~~~~~~Y~~~ 84 (136)
T 1mzb_A 18 LPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRHNFDGGHAVFELA 84 (136)
T ss_dssp HHHHHHHHHHHCC-CCSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTSEEEECSSSSSCEEEES
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHHHHHCCcEEEEEeCCCceEEEeC
Confidence 345566776664 3 6899999999982211 57788999999999999999887522112467754
No 469
>3k2z_A LEXA repressor; winged helix-turn-helix, SOS system, autoca cleavage, DNA damage, DNA repair, DNA replication, DNA-BIND hydrolase; 1.37A {Thermotoga maritima}
Probab=81.79 E-value=0.91 Score=37.45 Aligned_cols=36 Identities=19% Similarity=0.107 Sum_probs=33.3
Q ss_pred CCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeec
Q 021707 18 TPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 18 ~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
.|.|..|||+.+ |++...+.+.|+.|...|++....
T Consensus 23 ~~~s~~eia~~l----gl~~~tv~~~l~~Le~~G~i~~~~ 58 (196)
T 3k2z_A 23 YPPSVREIARRF----RITPRGALLHLIALEKKGYIERKN 58 (196)
T ss_dssp SCCCHHHHHHHH----TSCHHHHHHHHHHHHHTTSEECC-
T ss_pred CCCCHHHHHHHc----CCCcHHHHHHHHHHHHCCCEEecC
Confidence 489999999999 999889999999999999998874
No 470
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=81.53 E-value=1.4 Score=34.26 Aligned_cols=64 Identities=16% Similarity=0.105 Sum_probs=45.9
Q ss_pred hhhhhhhhhhcC-CCCCCHHHHHHHhCcCC-CCCcchHHHHHHHHHcCCceeeecccccCceEEcC
Q 021707 5 ECRDGRKKVRLA-NTPLSVSQILTCILPSG-GGDAENLQCILRLLTSYGVFSEHREFRGERKYSLT 68 (309)
Q Consensus 5 ~~~~g~~~~~l~-~~~~t~~eLA~~~~~~~-g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t 68 (309)
.-+..+++.+.. +++.|++||.+.+.... +++..-+.|.|+.|+..|++.+...+.+..+|...
T Consensus 14 ~qR~~Il~~L~~~~~h~sa~eI~~~l~~~~~~is~aTVYR~L~~L~e~Glv~~~~~~~g~~~Y~~~ 79 (139)
T 3mwm_A 14 RQRAAVSAALQEVEEFRSAQELHDMLKHKGDAVGLTTVYRTLQSLADAGEVDVLRTAEGESVYRRC 79 (139)
T ss_dssp HHHHHHHHHHTTCSSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTSSEEEECTTSCEEEECC
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHCCCEEEEEcCCCceEEEEC
Confidence 345567776665 46999999999882111 57788999999999999999887532123467665
No 471
>2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, GE regulation; 2.70A {Mycobacterium tuberculosis}
Probab=81.31 E-value=1.7 Score=33.27 Aligned_cols=62 Identities=15% Similarity=0.100 Sum_probs=44.4
Q ss_pred hhhhhhhhhcC-CCCCCHHHHHHHhCcCC-CCCcchHHHHHHHHHcCCceeeecccccCceEEc
Q 021707 6 CRDGRKKVRLA-NTPLSVSQILTCILPSG-GGDAENLQCILRLLTSYGVFSEHREFRGERKYSL 67 (309)
Q Consensus 6 ~~~g~~~~~l~-~~~~t~~eLA~~~~~~~-g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~ 67 (309)
-+..+++.+.. +++.|++||.+.+.... +++...+.|.|+.|+..|++.+...+.+..+|..
T Consensus 12 qR~~Il~~l~~~~~~~sa~ei~~~l~~~~~~is~~TVYR~L~~L~e~Glv~~~~~~~~~~~y~~ 75 (131)
T 2o03_A 12 QRAAISTLLETLDDFRSAQELHDELRRRGENIGLTTVYRTLQSMASSGLVDTLHTDTGESVYRR 75 (131)
T ss_dssp HHHHHHHHHHHCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTTSEEEEECTTSCEEEEE
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCCEEEEEeCCCceEEEe
Confidence 34556666653 56999999999982211 6778899999999999999988753211235654
No 472
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=80.65 E-value=5 Score=34.68 Aligned_cols=88 Identities=11% Similarity=-0.050 Sum_probs=50.7
Q ss_pred ceEEEecCCc--cHHHHHHHHhcCCCceEEEeec-hhHHhhCCCCCCceEEeCCCCCCCCCCceeeehhhhhcCChhHHH
Q 021707 162 KRLVDVGGSA--GDCLRMILQKHHFICEGINFDL-PEVVGEAPSIPGVTHIGGDMFNSIPAANAIFMKWVLATWTDDECK 238 (309)
Q Consensus 162 ~~vlDvG~G~--G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~~ri~~~~~d~~~~~p~~D~i~~~~vlh~~~d~~~~ 238 (309)
.+|.=||+|. +.++..+.+..++.+ +++.|. ++..+.+.+...+.....|..+....+|+|++.- ++....
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~-V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilav-----p~~~~~ 80 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYK-IVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAV-----PIKKTI 80 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSE-EEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECS-----CHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcE-EEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcC-----CHHHHH
Confidence 4688888874 334445555544567 899997 4444433222111122234433344569988765 444456
Q ss_pred HHHHHHHHh-cCCCcEEE
Q 021707 239 LIMENCYKA-LLAGGKLI 255 (309)
Q Consensus 239 ~iL~~~~~a-L~pgG~l~ 255 (309)
.+++++... ++|+..++
T Consensus 81 ~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 81 DFIKILADLDLKEDVIIT 98 (290)
T ss_dssp HHHHHHHTSCCCTTCEEE
T ss_pred HHHHHHHhcCCCCCCEEE
Confidence 788888887 88775444
No 473
>3elk_A Putative transcriptional regulator TA0346; structural genomics, PSI-2, prote structure initiative; 1.70A {Thermoplasma acidophilum}
Probab=80.59 E-value=0.82 Score=34.57 Aligned_cols=61 Identities=11% Similarity=0.246 Sum_probs=44.9
Q ss_pred CCCCCCHHHHHHHhCcC--CCCCcchHHHHHHHHHcCCceeeecc--cc--cCceEEcChhchhhhc
Q 021707 16 ANTPLSVSQILTCILPS--GGGDAENLQCILRLLTSYGVFSEHRE--FR--GERKYSLTEIGKSLVT 76 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~~--~g~~~~~l~rlL~~L~~~gll~~~~~--~~--~~~~y~~t~~~~~l~~ 76 (309)
.++|.+.-||++.+... ..+++..+...|+-|...|+|+.... +. ..-.|++|+.|+..+.
T Consensus 24 ~~~p~~gyel~~~l~~~~~~~i~~gtly~~L~~Le~~GlI~~~~~~~~~~~~rk~Y~lT~~G~~~l~ 90 (117)
T 3elk_A 24 VKRPMHGYELQKSMFETTGQALPQGSIYILLKTMKERGFVISESSVNEKGQQLTVYHITDAGKKFLC 90 (117)
T ss_dssp HHSCEEHHHHHHHHHHHHSCCCCTTHHHHHHHHHHHHTSEEEEEEEC-CCCEEEEEEECHHHHHHHH
T ss_pred HcCCCCHHHHHHHHHHHhCCCCCcchHHHHHHHHHHCCCEEEEeeecCCCCCceEEEECHHHHHHHH
Confidence 46899999999998100 02788999999999999999986542 10 1126999999976554
No 474
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=80.57 E-value=1.1 Score=41.00 Aligned_cols=59 Identities=14% Similarity=0.211 Sum_probs=46.4
Q ss_pred hhhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeeccc-----ccCceEEcChhch
Q 021707 9 GRKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREF-----RGERKYSLTEIGK 72 (309)
Q Consensus 9 g~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~-----~~~~~y~~t~~~~ 72 (309)
-+++.+. ++++|..|||+.+ |+++..+.++++.|...|++.+.+.. +..-.|++++...
T Consensus 24 ~il~~l~-~~~~sr~~la~~~----gls~~tv~~~v~~L~~~gli~~~~~~~~~~GR~~~~l~~~~~~~ 87 (380)
T 2hoe_A 24 RILKRIM-KSPVSRVELAEEL----GLTKTTVGEIAKIFLEKGIVVEEKDSPKGVGRPTKSLKISPNCA 87 (380)
T ss_dssp CSHHHHH-HSCBCHHHHHHHH----TCCHHHHHHHHHHHHHHTSEEEEECCC----CCCEEEEECGGGC
T ss_pred HHHHHHH-cCCcCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEeecCCCCCCCCCceEEEEccCCC
Confidence 3567777 8999999999999 99999999999999999999886521 1122366666543
No 475
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=80.52 E-value=4.4 Score=37.57 Aligned_cols=88 Identities=17% Similarity=0.168 Sum_probs=54.7
Q ss_pred ceEEEecCCc-cHHHHHHHHhcCCCceEEEeec-hhHHhhCCCCCCceEEeCCCCCC-------CCCCceeeehhhhhcC
Q 021707 162 KRLVDVGGSA-GDCLRMILQKHHFICEGINFDL-PEVVGEAPSIPGVTHIGGDMFNS-------IPAANAIFMKWVLATW 232 (309)
Q Consensus 162 ~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~~ri~~~~~d~~~~-------~p~~D~i~~~~vlh~~ 232 (309)
.+|+=||+|. |......+... +.. ++++|. ++.++.+++ ..+.++.||..++ +..+|++++..
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~-g~~-vvvId~d~~~v~~~~~-~g~~vi~GDat~~~~L~~agi~~A~~viv~~----- 76 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS-GVK-MVVLDHDPDHIETLRK-FGMKVFYGDATRMDLLESAGAAKAEVLINAI----- 76 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCC-EEEEECCHHHHHHHHH-TTCCCEESCTTCHHHHHHTTTTTCSEEEECC-----
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCC-EEEEECCHHHHHHHHh-CCCeEEEcCCCCHHHHHhcCCCccCEEEECC-----
Confidence 5788888763 44434444332 567 999998 666666653 4577888998764 23367776544
Q ss_pred ChhHHHHHHHHHHHhcCCCcEEEEe
Q 021707 233 TDDECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 233 ~d~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
++++.-..+....+.+.|+.+++..
T Consensus 77 ~~~~~n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 77 DDPQTNLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp SSHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CChHHHHHHHHHHHHhCCCCeEEEE
Confidence 3333334444556667888777764
No 476
>1hsj_A Fusion protein consisting of staphylococcus accessary regulator protein R and maltose...; novel fold for DNA binding; HET: GLC; 2.30A {Escherichia coli} SCOP: a.4.5.28 c.94.1.1
Probab=80.48 E-value=1.2 Score=41.79 Aligned_cols=55 Identities=18% Similarity=0.163 Sum_probs=45.6
Q ss_pred CCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 18 TPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 18 ~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
+++|..|||+.+ ++++..+.|+++-|...|+|.+... |+..-...+|+.++.+..
T Consensus 419 ~~~~~~~l~~~~----~~~~~~~t~~~~~le~~g~v~r~~~~~D~R~~~i~lT~~g~~~~~ 475 (487)
T 1hsj_A 419 NEISSKEIAKCS----EFKPYYLTKALQKLKDLKLLSKKRSLQDERTVIVYVTDTQKANIQ 475 (487)
T ss_dssp SEEEHHHHHHSS----CCCHHHHHHHHHHHHTTTTSCCEECCSSSSCCEEECCSSHHHHHH
T ss_pred CCcCHHHHHHHH----CCCHHHHHHHHHHHHHCCCEeecCCCCCCCeEEEEECHHHHHHHH
Confidence 789999999999 9999999999999999999988652 222346888888866554
No 477
>2dk5_A DNA-directed RNA polymerase III 39 kDa polypeptide; structural genomics, winged helix domain, NPPSFA; NMR {Homo sapiens} SCOP: a.4.5.85
Probab=80.37 E-value=1.3 Score=31.91 Aligned_cols=37 Identities=14% Similarity=0.054 Sum_probs=34.1
Q ss_pred CCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeec
Q 021707 17 NTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 17 ~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
+..++..|||+++ +++...+.++|+.|...|+|.+..
T Consensus 34 ~~gi~qkeLa~~~----~l~~~tvt~iLk~LE~kglIkr~~ 70 (91)
T 2dk5_A 34 NKGIWSRDVRYKS----NLPLTEINKILKNLESKKLIKAVK 70 (91)
T ss_dssp TTCEEHHHHHHHT----TCCHHHHHHHHHHHHHTTSEEEEC
T ss_pred CCCcCHHHHHHHH----CCCHHHHHHHHHHHHHCCCEEEec
Confidence 4589999999999 999999999999999999999554
No 478
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=80.21 E-value=9.1 Score=30.44 Aligned_cols=90 Identities=12% Similarity=0.118 Sum_probs=49.9
Q ss_pred cceEEEecCC-ccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCCCCceEEeCCCCCC--------CCCCceeeehhhhh
Q 021707 161 VKRLVDVGGS-AGDCLRMILQKHHFICEGINFDL-PEVVGEAPSIPGVTHIGGDMFNS--------IPAANAIFMKWVLA 230 (309)
Q Consensus 161 ~~~vlDvG~G-~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~~ri~~~~~d~~~~--------~p~~D~i~~~~vlh 230 (309)
..+|+=+|+| .|......+.+..+.+ ++++|. ++.++.+++ ..+..+.+|..+. ...+|+++...-
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~-V~vid~~~~~~~~~~~-~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~-- 114 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKI-SLGIEIREEAAQQHRS-EGRNVISGDATDPDFWERILDTGHVKLVLLAMP-- 114 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSC-EEEEESCHHHHHHHHH-TTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS--
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCe-EEEEECCHHHHHHHHH-CCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC--
Confidence 4578888876 2433333333321456 899997 444444432 3567777887542 223587776421
Q ss_pred cCChhHHHHHHHHHHHhcCCCcEEEEe
Q 021707 231 TWTDDECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 231 ~~~d~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
++.....++ ...+.+.|+.+++..
T Consensus 115 --~~~~~~~~~-~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 115 --HHQGNQTAL-EQLQRRNYKGQIAAI 138 (183)
T ss_dssp --SHHHHHHHH-HHHHHTTCCSEEEEE
T ss_pred --ChHHHHHHH-HHHHHHCCCCEEEEE
Confidence 233333333 455567788877763
No 479
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=80.14 E-value=1.9 Score=38.91 Aligned_cols=99 Identities=12% Similarity=-0.015 Sum_probs=59.2
Q ss_pred ceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCC-CCceEEeCCCCCCC----C--CCceeeehhhhhcCC
Q 021707 162 KRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSI-PGVTHIGGDMFNSI----P--AANAIFMKWVLATWT 233 (309)
Q Consensus 162 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~-~ri~~~~~d~~~~~----p--~~D~i~~~~vlh~~~ 233 (309)
.+|+|+-||.|.+...+.+..-..+.+.++|. +..++..+.+ +...++.+|+.+.. + ..|+++...-+..|+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~fS 82 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFT 82 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC-----
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcchh
Confidence 57999999999999999988533333688888 5555544433 45667888887642 2 359999877665554
Q ss_pred hh--------HHHHHHHHHH---HhcC--CCcEEEEeccccC
Q 021707 234 DD--------ECKLIMENCY---KALL--AGGKLIACEPVLL 262 (309)
Q Consensus 234 d~--------~~~~iL~~~~---~aL~--pgG~l~i~e~~~~ 262 (309)
.. ..-.++.++. +.++ | ++++.|.+..
T Consensus 83 ~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P--~~~~~ENV~~ 122 (343)
T 1g55_A 83 RIGRQGDMTDSRTNSFLHILDILPRLQKLP--KYILLENVKG 122 (343)
T ss_dssp -------------CHHHHHHHHGGGCSSCC--SEEEEEEETT
T ss_pred hcCCcCCccCccchHHHHHHHHHHHhcCCC--CEEEEeCCcc
Confidence 21 1112444333 3444 5 4666676654
No 480
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=79.56 E-value=1.5 Score=34.41 Aligned_cols=65 Identities=18% Similarity=0.146 Sum_probs=45.4
Q ss_pred chhhhhhhhhhcCCCCCCHHHHHHHhCcCC-CCCcchHHHHHHHHHcCCceeeecccccCceEEcC
Q 021707 4 NECRDGRKKVRLANTPLSVSQILTCILPSG-GGDAENLQCILRLLTSYGVFSEHREFRGERKYSLT 68 (309)
Q Consensus 4 ~~~~~g~~~~~l~~~~~t~~eLA~~~~~~~-g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t 68 (309)
|.-+..+++.+...++.|++||.+.+.... +++..-+.|.|+.|+..|++.+...+.+..+|.+.
T Consensus 18 T~qR~~Il~~l~~~~h~ta~ei~~~l~~~~~~is~~TVYR~L~~L~e~Glv~~i~~~~~~~~Y~~~ 83 (145)
T 3eyy_A 18 TPQRQLVLEAVDTLEHATPDDILGEVRKTASGINISTVYRTLELLEELGLVSHAHLGHGAPTYHLA 83 (145)
T ss_dssp CHHHHHHHHHHHHHSSBCHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHTSEEEEECGGGCEEEEET
T ss_pred CHHHHHHHHHHHhcCCCCHHHHHHHHHhhCCCCCHhHHHHHHHHHHHCCcEEEEEeCCCceEEEeC
Confidence 334556667666545999999999872211 56788999999999999999886522112357654
No 481
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=79.42 E-value=7 Score=32.22 Aligned_cols=86 Identities=13% Similarity=0.157 Sum_probs=52.6
Q ss_pred eEEEecCCccHHHHHHHHhc--CCCceEEEeec-hhHHhhCCCCCCceEEeCCCCCC-------CCCCceeeehhhhhcC
Q 021707 163 RLVDVGGSAGDCLRMILQKH--HFICEGINFDL-PEVVGEAPSIPGVTHIGGDMFNS-------IPAANAIFMKWVLATW 232 (309)
Q Consensus 163 ~vlDvG~G~G~~~~~l~~~~--p~~~~~~~~D~-p~~~~~a~~~~ri~~~~~d~~~~-------~p~~D~i~~~~vlh~~ 232 (309)
+|+=+|+ |.++..+++.. .+.. ++++|. ++.++...+..++.++.+|..++ ...+|++++..
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~-v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~----- 73 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYG-VVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILT----- 73 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCC-EEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECC-----
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCe-EEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEec-----
Confidence 4666775 55555555543 2556 899997 55555443334678899998764 23468877653
Q ss_pred ChhHHHHHHHHHHHhcCCCcEEEE
Q 021707 233 TDDECKLIMENCYKALLAGGKLIA 256 (309)
Q Consensus 233 ~d~~~~~iL~~~~~aL~pgG~l~i 256 (309)
++++.-.++....+.+.|..+++.
T Consensus 74 ~~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 74 PRDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp SCHHHHHHHHHHHHHTSCCCEEEE
T ss_pred CCcHHHHHHHHHHHHHcCCCeEEE
Confidence 333334455556666667776664
No 482
>3l7w_A Putative uncharacterized protein SMU.1704; PADR, transcriptional factor, transcription; HET: MSE; 2.20A {Streptococcus mutans} SCOP: a.4.5.0
Probab=78.90 E-value=1.7 Score=32.19 Aligned_cols=61 Identities=20% Similarity=0.152 Sum_probs=44.2
Q ss_pred CCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeeccccc---CceEEcChhchhhhc
Q 021707 16 ANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRG---ERKYSLTEIGKSLVT 76 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~---~~~y~~t~~~~~l~~ 76 (309)
.++|.+--+|++.+....++++..+.+.|+-|...|+|+......+ .-.|++|+.|+....
T Consensus 19 ~~~~~~gyel~~~l~~~~~i~~~tly~~L~~Le~~GlI~~~~~~~~~r~r~~y~LT~~G~~~l~ 82 (108)
T 3l7w_A 19 SKHDSYGYDISQTIKLIASIKESTLYPILKKLEKAGYLSTYTQEHQGRRRKYYHLTDSGEKHLV 82 (108)
T ss_dssp HHSCEEHHHHHHHHTTTCCCCHHHHHHHHHHHHHTTSEEEEEEEETTEEEEEEEECHHHHHHHH
T ss_pred HcCCCcHHHHHHHHHHHhCCCcChHHHHHHHHHHCCCeEEEeecCCCCcceEEEECHHHHHHHH
Confidence 4678888888777411117899999999999999999987642110 124999999976554
No 483
>1p4x_A Staphylococcal accessory regulator A homologue; winged-helix protein, transcription; 2.20A {Staphylococcus aureus} SCOP: a.4.5.28 a.4.5.28
Probab=78.86 E-value=1.4 Score=37.92 Aligned_cols=54 Identities=9% Similarity=0.060 Sum_probs=44.6
Q ss_pred CCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 19 PLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 19 ~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
++|..|||+.+ ++++..+.++++-|...|+|.+... |...-...+|+.|..+..
T Consensus 174 ~~t~~eLa~~l----~i~~~tvt~~v~rLe~~GlV~R~~~~~DrR~~~i~LT~~G~~~~~ 229 (250)
T 1p4x_A 174 IVLLKDLIETI----HHKYPQTVRALNNLKKQGYLIKERSTEDERKILIHMDDAQQDHAE 229 (250)
T ss_dssp CEEHHHHHHHS----SSCHHHHHHHHHHHHHHTSSEEEECSSSTTCEEEECCHHHHHHHH
T ss_pred CcCHHHHHHHH----CCChhhHHHHHHHHHHCCCEEeeCCCCCCCeEEEEECHHHHHHHH
Confidence 59999999999 9999999999999999999998652 212235888988876654
No 484
>2o0m_A Transcriptional regulator, SORC family; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: c.124.1.8
Probab=78.33 E-value=0.43 Score=43.27 Aligned_cols=57 Identities=14% Similarity=0.174 Sum_probs=0.0
Q ss_pred hhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhcC
Q 021707 12 KVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVTD 77 (309)
Q Consensus 12 ~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~~ 77 (309)
..+-.++++|..|||+.+ ++++..++|.|+.|...|+++... ....+|+.|+.+...
T Consensus 27 ~~l~~~~~~t~~eLa~~l----~vs~~Tv~r~l~~Le~~Glv~~~~-----~gi~LT~~G~~~~~~ 83 (345)
T 2o0m_A 27 RNIYWMQPIGRRSLSETM----GITERVLRTETDVLKQLNLIEPSK-----SGMTLTERGLEVYQG 83 (345)
T ss_dssp ------------------------------------------------------------------
T ss_pred HHHHHcCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEEEe-----cceEEcHHHHHHHHH
Confidence 333456899999999999 999999999999999999998553 348889888776654
No 485
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=77.93 E-value=14 Score=30.75 Aligned_cols=88 Identities=13% Similarity=0.023 Sum_probs=54.4
Q ss_pred cceEEEecCCccHHHHHHHHhcCCCceEEEeec-hhHHhhCCCCCCceEEeCCCCCC-------CCCCceeeehhhhhcC
Q 021707 161 VKRLVDVGGSAGDCLRMILQKHHFICEGINFDL-PEVVGEAPSIPGVTHIGGDMFNS-------IPAANAIFMKWVLATW 232 (309)
Q Consensus 161 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~~D~-p~~~~~a~~~~ri~~~~~d~~~~-------~p~~D~i~~~~vlh~~ 232 (309)
..+|+=+|+ |..+..+++..-....++++|. ++.++.++ .++.++.+|..++ ...+|+++...
T Consensus 9 ~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~--~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~----- 79 (234)
T 2aef_A 9 SRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLR--SGANFVHGDPTRVSDLEKANVRGARAVIVDL----- 79 (234)
T ss_dssp -CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH--TTCEEEESCTTCHHHHHHTTCTTCSEEEECC-----
T ss_pred CCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh--cCCeEEEcCCCCHHHHHhcCcchhcEEEEcC-----
Confidence 457888887 5777777776644321677776 55555554 5689999998753 23468777653
Q ss_pred ChhHHHHHHHHHHHhcCCCcEEEEe
Q 021707 233 TDDECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 233 ~d~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
++++.-.......+.+.|+.+++..
T Consensus 80 ~~d~~n~~~~~~a~~~~~~~~iia~ 104 (234)
T 2aef_A 80 ESDSETIHCILGIRKIDESVRIIAE 104 (234)
T ss_dssp SCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred CCcHHHHHHHHHHHHHCCCCeEEEE
Confidence 3333333444555667887666653
No 486
>4esb_A Transcriptional regulator, PADR family; DNA binding protein, HTH fold; 2.50A {Bacillus cereus}
Probab=77.78 E-value=1.7 Score=32.61 Aligned_cols=61 Identities=10% Similarity=0.067 Sum_probs=45.0
Q ss_pred CCCCCCHHHHHHHhCcC--CCCCcchHHHHHHHHHcCCceeeecccc--c--CceEEcChhchhhhc
Q 021707 16 ANTPLSVSQILTCILPS--GGGDAENLQCILRLLTSYGVFSEHREFR--G--ERKYSLTEIGKSLVT 76 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~~--~g~~~~~l~rlL~~L~~~gll~~~~~~~--~--~~~y~~t~~~~~l~~ 76 (309)
.++|.+--||++.+... -++++..+...|+-|...|+|+...... + .-.|++|+.|+..+.
T Consensus 19 ~~~~~~Gyei~~~l~~~~~~~is~gtlY~~L~rLe~~GlI~~~~~~~~~g~~rk~Y~LT~~G~~~l~ 85 (115)
T 4esb_A 19 SQEEVYGYELSTKLNKHGFTFVSEGSIYPLLLRMQKEKLIEGTLKASSLGPKRKYYHITDKGLEQLE 85 (115)
T ss_dssp HHSCEEHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHTTSEEEEEEECTTSCEEEEEEECHHHHHHHH
T ss_pred HcCCCCHHHHHHHHHHcCCCCCCcChHHHHHHHHHHCCCeEEEeeecCCCCCcEEEEECHHHHHHHH
Confidence 47899999999998110 0278899999999999999998753210 0 125999999976554
No 487
>1p4x_A Staphylococcal accessory regulator A homologue; winged-helix protein, transcription; 2.20A {Staphylococcus aureus} SCOP: a.4.5.28 a.4.5.28
Probab=77.68 E-value=1.9 Score=37.18 Aligned_cols=55 Identities=15% Similarity=0.170 Sum_probs=45.2
Q ss_pred CCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecc--cccCceEEcChhchhhhc
Q 021707 18 TPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHRE--FRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 18 ~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~--~~~~~~y~~t~~~~~l~~ 76 (309)
+++|..|||+.+ ++++..+.++++-|...|+|.+... |...-...+|+.|+.+..
T Consensus 49 ~~~~~~el~~~l----~~~~~t~t~~l~rLe~~G~i~R~~~~~DrR~~~i~LT~~G~~~~~ 105 (250)
T 1p4x_A 49 NTLPFKKIVSDL----CYKQSDLVQHIKVLVKHSYISKVRSKIDERNTYISISEEQREKIA 105 (250)
T ss_dssp SEEEHHHHHHHS----SSCGGGTHHHHHHHHHTTSCEEEECSSSTTSEEEECCHHHHHHHH
T ss_pred CCcCHHHHHHHH----CCCHhhHHHHHHHHHHCCCEEecCCCCCCCeEEEEECHHHHHHHH
Confidence 589999999999 9999999999999999999988652 211235889998877554
No 488
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=77.63 E-value=6 Score=35.28 Aligned_cols=49 Identities=16% Similarity=0.097 Sum_probs=35.9
Q ss_pred cceEEEecCCccHHHHHHHHhcCC----CceEEEeechhHHhhCCCCCCceEEe
Q 021707 161 VKRLVDVGGSAGDCLRMILQKHHF----ICEGINFDLPEVVGEAPSIPGVTHIG 210 (309)
Q Consensus 161 ~~~vlDvG~G~G~~~~~l~~~~p~----~~~~~~~D~p~~~~~a~~~~ri~~~~ 210 (309)
+..||-+|++.|.+..-|.+.||+ ++ .+++|...-+...+..++|+++.
T Consensus 76 g~~VVYaGsAPG~HI~fL~~lF~~l~~~lk-wvLiDp~~f~~~Le~~~ni~li~ 128 (348)
T 1vpt_A 76 GATVVYIGSAPGTHIRYLRDHFYNLGVIIK-WMLIDGRHHDPILNGLRDVTLVT 128 (348)
T ss_dssp TCEEEEESCSSCHHHHHHHHHHHHTTCCCE-EEEEESSCCCGGGTTCTTEEEEE
T ss_pred CCeEEEeCcCCcchHHHHHHHhhhcCCceE-EEEECCCchhhhhcCCCcEEeeh
Confidence 359999999999999999999887 56 78888643333444445566554
No 489
>2w57_A Ferric uptake regulation protein; gene regulation, transcription regulation, transport, iron, repressor, DNA-binding, transcription; 2.60A {Vibrio cholerae}
Probab=77.36 E-value=2.5 Score=33.22 Aligned_cols=64 Identities=14% Similarity=0.151 Sum_probs=45.2
Q ss_pred hhhhhhhhhhcCC--CCCCHHHHHHHhCcCC-CCCcchHHHHHHHHHcCCceeeecccccCceEEcC
Q 021707 5 ECRDGRKKVRLAN--TPLSVSQILTCILPSG-GGDAENLQCILRLLTSYGVFSEHREFRGERKYSLT 68 (309)
Q Consensus 5 ~~~~g~~~~~l~~--~~~t~~eLA~~~~~~~-g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t 68 (309)
.-+..+++.+... ++.|++||.+.+.... +++..-+.|.|+.|+..|+|.+...+.+..+|.++
T Consensus 17 ~qR~~Il~~L~~~~~~h~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~~~~~~~~~~~Y~~~ 83 (150)
T 2w57_A 17 LPRLKILEVLQQPECQHISAEELYKKLIDLGEEIGLATVYRVLNQFDDAGIVTRHHFEGGKSVFELS 83 (150)
T ss_dssp HHHHHHHHHHTSGGGSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTSEEEEECGGGCEEEEEC
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHCCcEEEEEeCCCceEEEec
Confidence 3455667766543 6899999999982211 57788999999999999999887521112457653
No 490
>3tqn_A Transcriptional regulator, GNTR family; regulatory functions; 2.80A {Coxiella burnetii}
Probab=76.64 E-value=3.4 Score=30.70 Aligned_cols=36 Identities=17% Similarity=0.113 Sum_probs=32.9
Q ss_pred CCC-CHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeec
Q 021707 18 TPL-SVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 18 ~~~-t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
..+ |..+||+.. |++...+++.|..|...|+++...
T Consensus 31 ~~lPs~~~La~~~----~vSr~tvr~al~~L~~~Gli~~~~ 67 (113)
T 3tqn_A 31 EMIPSIRKISTEY----QINPLTVSKAYQSLLDDNVIEKRR 67 (113)
T ss_dssp CEECCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEET
T ss_pred CcCcCHHHHHHHH----CcCHHHHHHHHHHHHHCCCEEEec
Confidence 345 899999999 999999999999999999998875
No 491
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=75.90 E-value=2.9 Score=36.22 Aligned_cols=97 Identities=16% Similarity=0.183 Sum_probs=63.5
Q ss_pred CcceEEEecCCccHHHHHHHHh-------cCCCceEEEeec----hhH------------------------Hhh-----
Q 021707 160 GVKRLVDVGGSAGDCLRMILQK-------HHFICEGINFDL----PEV------------------------VGE----- 199 (309)
Q Consensus 160 ~~~~vlDvG~G~G~~~~~l~~~-------~p~~~~~~~~D~----p~~------------------------~~~----- 199 (309)
-+..|+++|+-.|..+..+++. +++-+ +.++|. |+. +..
T Consensus 69 vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~-v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 69 VPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRR-IVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp SCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCC-EEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCeEEEEecccCHHHHHHHHHHHHhcccCCCCE-EEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 3579999999999988876542 35667 999994 321 010
Q ss_pred --CCC----CCCceEEeCCCCCCC-------CC--CceeeehhhhhcCChhHHHHHHHHHHHhcCCCcEEEEecccc
Q 021707 200 --APS----IPGVTHIGGDMFNSI-------PA--ANAIFMKWVLATWTDDECKLIMENCYKALLAGGKLIACEPVL 261 (309)
Q Consensus 200 --a~~----~~ri~~~~~d~~~~~-------p~--~D~i~~~~vlh~~~d~~~~~iL~~~~~aL~pgG~l~i~e~~~ 261 (309)
.+. .++|+++.|++.+-+ |. .|++++=- ++ -+.....|..+...|+|||.|++-|...
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~---D~-Y~~t~~~le~~~p~l~~GGvIv~DD~~~ 220 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDL---DL-YEPTKAVLEAIRPYLTKGSIVAFDELDN 220 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECC---CC-HHHHHHHHHHHGGGEEEEEEEEESSTTC
T ss_pred hhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcC---cc-cchHHHHHHHHHHHhCCCcEEEEcCCCC
Confidence 011 278999999986532 22 25555432 12 1234678889999999999888777543
No 492
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=75.89 E-value=1.2 Score=39.80 Aligned_cols=93 Identities=22% Similarity=0.258 Sum_probs=55.6
Q ss_pred cceEEEecCCccHHHHHH----HHhcCCCc-eEEEeech---------h----HH----hhCCC--CCCc--eEEeCCCC
Q 021707 161 VKRLVDVGGSAGDCLRMI----LQKHHFIC-EGINFDLP---------E----VV----GEAPS--IPGV--THIGGDMF 214 (309)
Q Consensus 161 ~~~vlDvG~G~G~~~~~l----~~~~p~~~-~~~~~D~p---------~----~~----~~a~~--~~ri--~~~~~d~~ 214 (309)
.-+|+|+|=|+|...... .+..|+.+ +.+.+|.. + .. ..... ..+| ++.-||..
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 458999999999865433 34577765 24666531 0 00 01110 1343 56678876
Q ss_pred CC---CCC--Cceeeehhh-----hhcCChhHHHHHHHHHHHhcCCCcEEEEe
Q 021707 215 NS---IPA--ANAIFMKWV-----LATWTDDECKLIMENCYKALLAGGKLIAC 257 (309)
Q Consensus 215 ~~---~p~--~D~i~~~~v-----lh~~~d~~~~~iL~~~~~aL~pgG~l~i~ 257 (309)
+. ++. +|++++=-. -.-|+ ..+++++++.++|||.+.-.
T Consensus 177 ~~l~~l~~~~~Da~flDgFsP~kNPeLWs----~e~f~~l~~~~~pgg~laTY 225 (308)
T 3vyw_A 177 KRIKEVENFKADAVFHDAFSPYKNPELWT----LDFLSLIKERIDEKGYWVSY 225 (308)
T ss_dssp HHGGGCCSCCEEEEEECCSCTTTSGGGGS----HHHHHHHHTTEEEEEEEEES
T ss_pred HHHhhhcccceeEEEeCCCCcccCcccCC----HHHHHHHHHHhCCCcEEEEE
Confidence 54 332 488886221 11233 47999999999999988744
No 493
>2ek5_A Predicted transcriptional regulators; helix-turn-helix, interwined alpha helices; 2.20A {Corynebacterium glutamicum atcc 13032} PDB: 2du9_A
Probab=75.66 E-value=4.6 Score=30.85 Aligned_cols=36 Identities=17% Similarity=0.210 Sum_probs=33.2
Q ss_pred CCC-CHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeec
Q 021707 18 TPL-SVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 18 ~~~-t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
..+ |..+||+.. |++...+++-|..|...|+++...
T Consensus 26 ~~LPse~~La~~~----gvSr~tVr~Al~~L~~~Gli~~~~ 62 (129)
T 2ek5_A 26 QRVPSTNELAAFH----RINPATARNGLTLLVEAGILYKKR 62 (129)
T ss_dssp SCBCCHHHHHHHT----TCCHHHHHHHHHHHHTTTSEEEET
T ss_pred CcCcCHHHHHHHH----CcCHHHHHHHHHHHHHCCcEEEec
Confidence 456 899999999 999999999999999999998876
No 494
>3lmm_A Uncharacterized protein; multi-domained alpha-beta protein, structural genomics, PSI- 2, protein structure initiative; 3.00A {Corynebacterium diphtheriae}
Probab=75.22 E-value=2.4 Score=41.29 Aligned_cols=58 Identities=7% Similarity=0.079 Sum_probs=48.5
Q ss_pred hhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHc-----CCceeeecccccCceEEcChhchhhhc
Q 021707 10 RKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTS-----YGVFSEHREFRGERKYSLTEIGKSLVT 76 (309)
Q Consensus 10 ~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~-----~gll~~~~~~~~~~~y~~t~~~~~l~~ 76 (309)
+.+.+..++.+|.++||+.+ ++++..+++.|+.|.. .|+++..+ +.|.+++.......
T Consensus 435 iL~~l~~~~~it~~~la~~l----~~s~~~~~~~L~~L~~~~~~~~glie~~g-----~~y~L~~~~~~~~~ 497 (583)
T 3lmm_A 435 VLYLLFQRPFITIDVVARGL----QSGKEAARNALEAARQTTVAGAPLIIAHD-----GVWLLGNACREILR 497 (583)
T ss_dssp HHHHHHHSSSBCHHHHHHHH----TSCHHHHHHHHHHHHTCEETTEESEEEET-----TEEEECHHHHHHHT
T ss_pred HHHHHHHCCCcCHHHHHHHh----CcCHHHHHHHHHHHHhhhccccceEEEeC-----CEEEECHHHHHHhc
Confidence 44445567899999999999 9999999999999999 88999984 68999997654443
No 495
>1xma_A Predicted transcriptional regulator; southea collaboratory for structural genomics, secsg, protein struc initiative, PSI; 2.30A {Clostridium thermocellum} SCOP: a.4.5.61
Probab=75.20 E-value=1.3 Score=34.90 Aligned_cols=61 Identities=13% Similarity=-0.042 Sum_probs=44.4
Q ss_pred CCCCCCHHHHHHHhCc----CCCCCcchHHHHHHHHHcCCceeeeccc----ccCceEEcChhchhhhc
Q 021707 16 ANTPLSVSQILTCILP----SGGGDAENLQCILRLLTSYGVFSEHREF----RGERKYSLTEIGKSLVT 76 (309)
Q Consensus 16 ~~~~~t~~eLA~~~~~----~~g~~~~~l~rlL~~L~~~gll~~~~~~----~~~~~y~~t~~~~~l~~ 76 (309)
.++|.+.-||++.+.. .-++++..|.+.|+-|...|+|+..... ...-.|++|+.++.++.
T Consensus 51 ~~~~~~gyeI~~~l~~~~~~~~~is~gtLy~~L~rLE~~GlI~~~~~~~~~~~~rk~Y~LT~~G~~~l~ 119 (145)
T 1xma_A 51 IEGDSYGYEISKNIRIKTDELYVIKETTLYSAFARLEKNGYIKSYYGEETQGKRRTYYRITPEGIKYYK 119 (145)
T ss_dssp HHCCEEHHHHHHHHHHHHTTSCCCCHHHHHHHHHHHHHTTSEEEEEEEEC--CEEEEEEECHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHhhCCccCcChhHHHHHHHHHHHCCCEEEEEeccCCCCCeEEEEECHHHHHHHH
Confidence 4688999998888710 0037899999999999999999876421 01135999998876654
No 496
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=74.57 E-value=1.8 Score=40.13 Aligned_cols=44 Identities=16% Similarity=0.048 Sum_probs=39.9
Q ss_pred hhhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeec
Q 021707 10 RKKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 10 ~~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
+++.+..++++|..|||+.+ |+++..+.++++.|...|++.+.+
T Consensus 44 il~~l~~~~~~sr~ela~~~----gls~~tv~~~v~~L~~~gli~~~~ 87 (429)
T 1z05_A 44 VYKLIDQKGPISRIDLSKES----ELAPASITKITRELIDAHLIHETT 87 (429)
T ss_dssp HHHHHHHHCSBCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEEC
T ss_pred HHHHHHHcCCcCHHHHHHHH----CCCHHHHHHHHHHHHHCCCEEecc
Confidence 56666678999999999999 999999999999999999998864
No 497
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=74.49 E-value=3.8 Score=32.16 Aligned_cols=62 Identities=21% Similarity=0.232 Sum_probs=43.5
Q ss_pred hhhhhhhhcC-CCCCCHHHHHHHhCcC-CCCCcchHHHHHHHHHcCCceeeecccccCceEEcC
Q 021707 7 RDGRKKVRLA-NTPLSVSQILTCILPS-GGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLT 68 (309)
Q Consensus 7 ~~g~~~~~l~-~~~~t~~eLA~~~~~~-~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t 68 (309)
+..+++.+.. +++.|++||.+.+... .+++..-+.|.|+.|+..|+|.+...+.+..+|..+
T Consensus 29 R~~IL~~l~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~~~~~~~~~~~Y~~~ 92 (150)
T 2xig_A 29 REEVVSVLYRSGTHLSPEEITHSIRQKDKNTSISSVYRILNFLEKENFISVLETSKSGRRYEIA 92 (150)
T ss_dssp HHHHHHHHHHCSSCBCHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTTSEEEEEETTTEEEEEES
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCcEEEEEeCCCceEEEec
Confidence 4456666654 4799999999988211 157788999999999999999886522112357653
No 498
>3neu_A LIN1836 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; 1.58A {Listeria innocua}
Probab=73.68 E-value=3.7 Score=31.12 Aligned_cols=36 Identities=17% Similarity=0.176 Sum_probs=32.9
Q ss_pred CCC-CHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeec
Q 021707 18 TPL-SVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHR 57 (309)
Q Consensus 18 ~~~-t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~ 57 (309)
..+ |..+||+.. |++...+++-+..|...|+|+...
T Consensus 35 ~~Lps~~~La~~~----~vSr~tvr~Al~~L~~~G~i~~~~ 71 (125)
T 3neu_A 35 DKLPSVREMGVKL----AVNPNTVSRAYQELERAGYIYAKR 71 (125)
T ss_dssp CBCCCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEET
T ss_pred CCCCCHHHHHHHH----CcCHHHHHHHHHHHHHCCeEEEec
Confidence 345 699999999 999999999999999999999875
No 499
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=73.67 E-value=3.9 Score=33.30 Aligned_cols=42 Identities=19% Similarity=0.339 Sum_probs=37.4
Q ss_pred CCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcCh
Q 021707 19 PLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTE 69 (309)
Q Consensus 19 ~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~ 69 (309)
+.|.++||..+ |+++..+.|.|..|...|+++..+ +++.+..
T Consensus 169 ~~t~~~lA~~l----g~sr~tvsR~l~~L~~~g~I~~~~-----~~i~i~d 210 (220)
T 3dv8_A 169 KITHETIANHL----GSHREVITRMLRYFQVEGLVKLSR-----GKITILD 210 (220)
T ss_dssp CCCHHHHHHHH----TCCHHHHHHHHHHHHHTTSEEEET-----TEEEESC
T ss_pred cCCHHHHHHHh----CCCHHHHHHHHHHHHHCCCEEeCC-----CEEEEeC
Confidence 78999999999 999999999999999999998874 5666553
No 500
>3eqx_A FIC domain containing transcriptional regulator; FIC family protein, structural genomics, joint center for ST genomics, JCSG; HET: MSE PGE; 1.60A {Shewanella oneidensis}
Probab=73.62 E-value=2 Score=39.32 Aligned_cols=64 Identities=13% Similarity=0.178 Sum_probs=47.7
Q ss_pred hhhhcCCCCCCHHHHHHHhCcCCCCCcchHHHHHHHHHcCCceeeecccccCceEEcChhchhhhcCCC
Q 021707 11 KKVRLANTPLSVSQILTCILPSGGGDAENLQCILRLLTSYGVFSEHREFRGERKYSLTEIGKSLVTDAE 79 (309)
Q Consensus 11 ~~~~l~~~~~t~~eLA~~~~~~~g~~~~~l~rlL~~L~~~gll~~~~~~~~~~~y~~t~~~~~l~~~~~ 79 (309)
++.+...+..|.+++++.+ |++....++.|+.|+..|++++.+.+. ...|.+++.-+.|..+..
T Consensus 303 l~~l~~~p~~t~~~~~~~~----~~S~~TA~r~L~~L~e~GiL~~~~~gR-~~~y~~~~~l~il~~~~~ 366 (373)
T 3eqx_A 303 VQVIFEQPYCRIQNLVESG----LAKRQTASVYLKQLCDIGVLEEVQSGK-EKLFVHPKFVTLMTKDSN 366 (373)
T ss_dssp HHHHHHCSEEEHHHHHHTS----SSCHHHHHHHHHHHHHTTSCEEC--CC-SCEEECHHHHHHHHSSCC
T ss_pred HHHHHHCCCccHHHHHHHh----CcCHHHHHHHHHHHHHCCcEEEeCCCC-ceEeehHHHHHHHhccCc
Confidence 3444445567999999999 999999999999999999999876332 346777776666666543
Done!