BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021708
(309 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
SV=1
Length = 310
Score = 227 bits (579), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 140/297 (47%), Positives = 183/297 (61%), Gaps = 38/297 (12%)
Query: 18 EITGQIMVIAIIVLFFVVVFILFLHLYAKWFWWRIEQ----------TPEPSPSRRHRRR 67
E G++++ +I+ +F ++F+L LHLYA+ FWWR+EQ P + R+ RR
Sbjct: 19 ETMGKVLLFSIVSIFTGILFLLLLHLYARLFWWRVEQHFNLNLIQSDDPGSTVIGRNPRR 78
Query: 68 RRFVFAPGQDPAVALRAGLDPAILRKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLP 127
RRFVFA Q+ + AGLD IL+ I VV F DFKDGLECAVCLS+L DG+KAR+LP
Sbjct: 79 RRFVFAQSQEDPLH-NAGLDSKILQSIHVVVFKCTDFKDGLECAVCLSDLVDGDKARVLP 137
Query: 128 KCNHGFHVECIDMWFQSHSTCPLCRNPV-DVERSNNGNGEPSVEIDIQNSQESLESGYST 186
+CNHGFHV+CIDMWFQSHSTCPLCRN V VE + +G E + ++ ESG+ST
Sbjct: 138 RCNHGFHVDCIDMWFQSHSTCPLCRNTVGSVEDTTHGGSEGLPQ------NQNFESGHST 191
Query: 187 DS----------------PPNFPTNVLFWGNENLVSSAGVCVHEGVSSSSSSSSSSSSTS 230
+ P +FPTNVL WG++N V SAG+ V E S + ++S +
Sbjct: 192 NQHNPSQDQSFVHEFSTEPLSFPTNVLVWGDQNQVRSAGLVVTEESPSGNFAASYNDHQQ 251
Query: 231 SSSSEMNNSRRGAEMLVIDIPVNSMSEHFSSLSPVEETKSPMTTRLRSLKRLLSREK 287
SSS + + +V+DIP NS SE+ S EE KSPM TRLR LK +LSREK
Sbjct: 252 ESSSTRS---QEVTAVVVDIPDNS-SENLSERIDEEEPKSPMFTRLRLLKNVLSREK 304
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 216 bits (550), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/310 (42%), Positives = 170/310 (54%), Gaps = 49/310 (15%)
Query: 11 FQNTGSLEITGQIMVIAIIVLFFVVVFILFLHLYAKWFWWRIEQTPEPS----------- 59
F + + E+T +I++ AIIVLF V+F+L LHLYAK +WWRI+Q +
Sbjct: 12 FGDLSTEEVTSKIILTAIIVLFMAVLFVLILHLYAKLYWWRIDQLQQQQQQQQQEQEQEE 71
Query: 60 -------PSRRHRRRRRFVFAPGQDPAVALRAGLDPAILRKIPVVAFNQQDFKDGLECAV 112
P R+RRRF+F PGQD GL L +P+V F Q KDGLEC++
Sbjct: 72 DQSSIAPPVVTRRQRRRFIFVPGQDALS--NTGLTSFELSSLPIVFFRQDSCKDGLECSI 129
Query: 113 CLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPV-DVERSNNGNGEP---- 167
CLSEL G+KARLLPKCNH FHVECIDMWFQSHSTCP+CRN V E++++ E
Sbjct: 130 CLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPEQASSKRVEQVPDN 189
Query: 168 SVEIDIQNSQESLESGYSTDSPPNFPTNVLFWGNENLVSSAGVCVHEGVSSSSSSSSSSS 227
+ N+ S ST SP FPTNVL WG ++ VS+ V
Sbjct: 190 AENAGTTNNNHDALSQLSTSSP-EFPTNVLVWGRQDQVSTGNTNV--------------- 233
Query: 228 STSSSSSEMNNSRRGAEMLVIDIP--------VNSMSEHFSSLSPVEETKSPMTTRLRSL 279
T + N + + E +V+DI V+S S + EE KSPMTTRLRSL
Sbjct: 234 GTQEDGAAGNGASQSQEAVVLDISDSSSRNHNVSSSSSSMRFIVEEEEAKSPMTTRLRSL 293
Query: 280 KRLLSREKRV 289
+R LSR+KRV
Sbjct: 294 RRFLSRDKRV 303
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 157 bits (398), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 151/289 (52%), Gaps = 40/289 (13%)
Query: 7 DENGFQNTGSLEITGQIMVIAIIVLFFVVVFILFLHLYAKWFWWRIEQTPEPSPSRRHRR 66
++N F + + ++G+IM+ AI++LFFVV+ ++FLHLYA+W+ R + SR R
Sbjct: 14 EDNNFSGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRA 73
Query: 67 RRRFVFAPGQDPAVALRA--GLDPAILRKIPVVAFNQQDFKDGLECAVCLSELEDGEKAR 124
F A A ++ A GLDP +++ +PV F+ + KD +ECAVCLSE E+ E R
Sbjct: 74 TMVFFTADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGR 133
Query: 125 LLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQNSQESLESGY 184
+LP C H FHV+CIDMWF SHSTCPLCR+ V E I+ + E
Sbjct: 134 VLPNCQHTFHVDCIDMWFHSHSTCPLCRSLV----------ESLAGIESTAAAREREVVI 183
Query: 185 STDSPPNFPTNVLFWGNENLVSSAGVCVHEGVSSSSSSSSSSSSTSSSSSEMNNSRRGAE 244
+ DS P VL + SSSS + S SS+M G +
Sbjct: 184 AVDSDP-----VLV-----------------IEPSSSSGLTDEPHGSGSSQMLREDSGRK 221
Query: 245 MLVIDIPVNSMSEHFSSL----SPVEET-KSPMTTRLRSLKRLLSREKR 288
I++P + SE L SP ++ +SPM +R+ S R+LSR++R
Sbjct: 222 PAAIEVPRRTFSEFEDELTRRDSPASQSFRSPM-SRMLSFTRMLSRDRR 269
>sp|Q9LUL6|ATL61_ARATH Putative RING-H2 finger protein ATL61 OS=Arabidopsis thaliana
GN=ATL61 PE=3 SV=1
Length = 204
Score = 118 bits (295), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 2/117 (1%)
Query: 83 RAGLDPAILRKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWF 142
R G+ P +LR IP+V FN +DFK LEC VCLSEL DG+KAR+LP C+H FHVECID W
Sbjct: 61 RVGIKPYVLRSIPIVDFNTKDFKYVLECVVCLSELADGDKARVLPSCDHWFHVECIDSWL 120
Query: 143 QSHSTCPLCRNPVDVERSNNGN--GEPSVEIDIQNSQESLESGYSTDSPPNFPTNVL 197
QS+STCP+CR V +++S G + + Q S +STD P N T ++
Sbjct: 121 QSNSTCPICRKRVCLKQSRTRPELGGRDKSFNQNHDQTSEHHEFSTDPPTNTDTAII 177
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 89/151 (58%), Gaps = 10/151 (6%)
Query: 10 GFQNTGS--LEITGQIMVIAIIVLFFVVVFILFLHLYAKWFWWRIEQTPEPSPSRRHRRR 67
G N GS + G+IM+ ++I+LF V+ IL H YA+W + R + S R
Sbjct: 13 GNMNHGSSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISAHLRS- 71
Query: 68 RRFVFAPGQDPA--VALRAGLDPAILRKIPVVAFNQQDFKDGLE-CAVCLSELEDGEKAR 124
A +DP + + LDP +L KIP+ ++ + + LE C+VCLSE E+ ++ R
Sbjct: 72 ----LAAARDPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGR 127
Query: 125 LLPKCNHGFHVECIDMWFQSHSTCPLCRNPV 155
+LPKC H FHV+CID WF+S S+CPLCR PV
Sbjct: 128 VLPKCGHVFHVDCIDTWFRSRSSCPLCRAPV 158
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 86/160 (53%), Gaps = 9/160 (5%)
Query: 26 IAIIVLFFVVVFIL--FLHLYAKWFWWRIEQTPEPSPSR-RHRRRRRFVFAPGQDPAVAL 82
+AII F +VF L L +YAK F + + R RH R + +F +
Sbjct: 41 LAIITGVFSIVFTLTFVLLVYAKCFHNDLRSETDSDGERIRHDRLWQGLFNRS-----SR 95
Query: 83 RAGLDPAILRKIPVVAFNQ-QDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMW 141
+GLD + +P F+ + K GLEC+VCLS+ ED E RLLPKC H FH+ CID W
Sbjct: 96 FSGLDKKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQW 155
Query: 142 FQSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQNSQESLE 181
+ H+TCPLCRN V++E + G S + I N E+ E
Sbjct: 156 LEQHATCPLCRNRVNIEDDLSVLGNSSTSLRILNQSETRE 195
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 41 LHLYAKWFWWRIEQTPEPSPSRRHRRRRRFVFAPGQDPAVALRAGLDPAILRKIPVVAFN 100
LHLY +W+ R SP R F P P GL+P+I++ +P+ F+
Sbjct: 18 LHLYYRWYLLR------SSPFNRTTAASTFFTDPSSTPG-----GLNPSIIKSLPIFTFS 66
Query: 101 QQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVD 156
+EC+VCLSE +D E R++P C H FHV CIDMWF SHS+CPLCR+ ++
Sbjct: 67 AVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQIE 122
>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
SV=1
Length = 227
Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 84/140 (60%), Gaps = 13/140 (9%)
Query: 19 ITGQIMVIAIIVLFFVVVFILFLHLYAKWFWWRIEQTPEPSPSRRHRRRRRFVFAPGQDP 78
+ G+IM+ ++IVLF V+ IL H YA+W + + RR R R + A +D
Sbjct: 24 LNGKIMLSSVIVLFVAVIMILCFHSYARWLF----RRHNRRIRRRIRSHLRTLSASPRDQ 79
Query: 79 AVALRAGLDPAILRKIPVVAF---NQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHV 135
A LD A+L KIP+ + N ++ EC+VCLSE E+ ++ RLLPKC H FHV
Sbjct: 80 A------LDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHV 133
Query: 136 ECIDMWFQSHSTCPLCRNPV 155
+CID WF+S STCPLCR PV
Sbjct: 134 DCIDTWFRSRSTCPLCRAPV 153
>sp|Q9LRB7|EL5_ORYSJ E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica
GN=EL5.1 PE=1 SV=1
Length = 325
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 53/78 (67%), Gaps = 11/78 (14%)
Query: 86 LDPAILRKIPVVAFNQQDFKD-----------GLECAVCLSELEDGEKARLLPKCNHGFH 134
+DP +LR +PV +++ G+ECAVCL+ELEDGE+AR LP+C HGFH
Sbjct: 99 VDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFH 158
Query: 135 VECIDMWFQSHSTCPLCR 152
EC+DMW SHSTCPLCR
Sbjct: 159 AECVDMWLGSHSTCPLCR 176
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 18/154 (11%)
Query: 22 QIMVIAIIVLFFVVVFILFLHLYAKWFWWRIEQTPEPSPSRRHRRRRRFVFAPGQDPAVA 81
+ V A++V F + +L +++ R P S R+ R R + +
Sbjct: 46 KTTVFAVLVTLFFLTGLLSVYI-------RHCARSNPDSSTRYFRNR-------ANDGSS 91
Query: 82 LRAGLDPAILRKIPVVAFNQ-QDFKDG---LECAVCLSELEDGEKARLLPKCNHGFHVEC 137
R GLD A++ PV A++ ++ K G LECA+CL+ELED E RLLP CNH FH++C
Sbjct: 92 RRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDC 151
Query: 138 IDMWFQSHSTCPLCRNPVDVERSNNGNGEPSVEI 171
ID W SH+TCP+CR+ + + + G+ + V +
Sbjct: 152 IDTWLYSHATCPVCRSNLTAKSNKPGDEDDGVPL 185
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 97.8 bits (242), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 126/279 (45%), Gaps = 42/279 (15%)
Query: 23 IMVIAIIVLFFVVVFILFLHLYAKWFWWRIEQTPEPSPSRRHRRRRRFVFAPGQDPAVA- 81
+ VI I+ F++V + W RI+ S SRR R QDP +
Sbjct: 39 VAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRN--------DQDPLMVY 90
Query: 82 ---LRA-GLDPAILRKIPVVAFNQQ-DFKDGL--------------ECAVCLSELEDGEK 122
LR+ GLD +++R IP+ F ++ D DG+ EC+VCLSE +D EK
Sbjct: 91 SPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEK 150
Query: 123 ARLLPKCNHGFHVECIDMWFQSHSTCPLCRN--------PVDVERSNNGNGEPSVEIDIQ 174
R++P C+H FH++CID+W Q+++ CPLCR P D + + + E V + +
Sbjct: 151 LRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSAPSTSPENLVMLRGE 210
Query: 175 NSQESLESGYSTDSPPNFPTN-VLFWGNENLVSSAGVCVHEGVSSSSSSSSSSSSTSSSS 233
N +E G S S + P + L G E S++G ++E +S S S
Sbjct: 211 NEYVVIELGSSIGSDRDSPRHGRLLTGQER--SNSGYLLNENTQNSISPSPKKLDRGGLP 268
Query: 234 SEMNNSRRGAEM--LVIDIPVNSMSEHFSSLSPVEETKS 270
+ + M IDI E F S+ P+ + S
Sbjct: 269 RKFRKLHKMTSMGDECIDIR-RGKDEQFGSIQPIRRSIS 306
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 84 AGLDPAILRKIPVVAFNQ-QDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWF 142
+G+D +++ +PV F KDGLECAVCL+ E E RLLPKC H FHVEC+D W
Sbjct: 119 SGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWL 178
Query: 143 QSHSTCPLCRNPVDVE 158
+HSTCPLCR VD E
Sbjct: 179 DAHSTCPLCRYRVDPE 194
>sp|Q9SLC3|ATL41_ARATH E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41
PE=1 SV=1
Length = 236
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 82/166 (49%), Gaps = 22/166 (13%)
Query: 1 MSASDGDENGFQ--------NTGSLEITGQIMVIAIIVLFFVVVFILFLHLYAKWFWWRI 52
MS++D D F N + ++ +IM+ A+ L V++ + LHLYA++
Sbjct: 1 MSSNDRDHRRFNSDHHSFWPNPSTYDLNSKIMLAAVASLSGVILIVFALHLYARFVL--- 57
Query: 53 EQTPEPSPSRRHRRRRRFVFAPGQDPAVALRAGLDPAILRKIPVVAFNQQD--FKDGLEC 110
RR R R + + P + GL+P ++ +P D EC
Sbjct: 58 ---------RRRREAFRGLPVIFRHPFEMPKRGLNPTVIASLPTFTVGATDGVAASATEC 108
Query: 111 AVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVD 156
AVCLS L++ +KAR LP C H FHV+C+D W + STCP+CR V+
Sbjct: 109 AVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVE 154
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 79/142 (55%), Gaps = 20/142 (14%)
Query: 24 MVIAIIVLFFVVVFIL-FLHLYAKWFWWRIE-----------QTPEPSPSRRHRRRRRFV 71
+++ IIVL V+ FI LHL +++ + Q PE S S ++R+ + +
Sbjct: 52 IILFIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQL 111
Query: 72 FAPGQDPAVALRAGLDPAILRKIPVVAFNQ-QDFKDGLECAVCLSELEDGEKARLLPKCN 130
F +GLD A++ +PV + + + K+ +CAVCL E + +K RLLP C+
Sbjct: 112 FHLHD-------SGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCS 164
Query: 131 HGFHVECIDMWFQSHSTCPLCR 152
H FH++CID W S+STCPLCR
Sbjct: 165 HAFHIDCIDTWLLSNSTCPLCR 186
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 25/151 (16%)
Query: 23 IMVIAIIVLFFVVVFILFLHLYAKWFWWRIEQTPEPSPSRRHRRRRRFVFAPGQDPAVA- 81
I VI I+ F++V + W +I+ RRRRR + Q+P +
Sbjct: 46 IAVIGILATAFLLVSYYIFVIKCCLNWHQIDI---------FRRRRR---SSDQNPLMIY 93
Query: 82 ----LRAGLDPAILRKIPVVAFNQQDF--------KDGLECAVCLSELEDGEKARLLPKC 129
+ GLD + +R IPV F ++D K+ EC+VCL+E ++ EK R++P C
Sbjct: 94 SPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNC 153
Query: 130 NHGFHVECIDMWFQSHSTCPLCRNPVDVERS 160
H FH++CID+W Q ++ CPLCR V E S
Sbjct: 154 CHVFHIDCIDIWLQGNANCPLCRTSVSCEAS 184
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 85 GLDPAILRKIPVVAFNQQD-FKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQ 143
GL+ ++++ I V + D F DG +C+VCLSE E+ E RLLPKCNH FH+ CID W +
Sbjct: 116 GLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLK 175
Query: 144 SHSTCPLCR 152
SHS CPLCR
Sbjct: 176 SHSNCPLCR 184
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 80/161 (49%), Gaps = 28/161 (17%)
Query: 29 IVLFFVVVFILFLHLYAKWFW----------WRIEQTPEPSPSRRHRRRRRFVFAPGQDP 78
+VL V++F++F ++ + W W +++TP V P ++
Sbjct: 25 VVLTGVLLFVIFAGFFSLFLWQFLLNRLFTTWNLQRTPYGDLIH--------VATPPEN- 75
Query: 79 AVALRAGLDPAILRKIPVVAFNQQDFKD-GLECAVCLSELEDGEKARLLPKCNHGFHVEC 137
GLDP I+R PV ++ K+ G ECA+CLSE D + RL+ C H FH C
Sbjct: 76 -----TGLDPFIIRSFPVFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNC 130
Query: 138 IDMWFQSHSTCPLCRNPVDVERSNNGNGEP---SVEIDIQN 175
ID+WF+ H TCP+CR +D +G E +V I IQ+
Sbjct: 131 IDLWFELHKTCPVCRCELDPGMIGSGRLESFHNTVTITIQD 171
>sp|Q9LJL6|ATL62_ARATH Putative RING-H2 finger protein ATL62 OS=Arabidopsis thaliana
GN=ATL62 PE=5 SV=1
Length = 141
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 51/83 (61%)
Query: 74 PGQDPAVALRAGLDPAILRKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLPKCNHGF 133
P V G++P++L IPVV+FN FKD +EC VCLS+ D +KAR+LP CNH F
Sbjct: 43 PSHSLHVIKATGINPSVLLSIPVVSFNANAFKDNIECVVCLSKFIDEDKARVLPSCNHCF 102
Query: 134 HVECIDMWFQSHSTCPLCRNPVD 156
H + D W S TCP CR V+
Sbjct: 103 HFDFTDTWLHSDYTCPNCRKNVE 125
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
Query: 84 AGLDPAILRKIPVVAFNQ-QDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWF 142
+GLD + +P+ F+ + K GL+C+VCLS+ E E RLLPKC H FH+ CID W
Sbjct: 96 SGLDKTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWL 155
Query: 143 QSHSTCPLCRNPVDVERSN----NGN 164
+ H+TCPLCR+ V +E + NGN
Sbjct: 156 EQHATCPLCRDRVSMEEDSSVLTNGN 181
>sp|P0C034|ATL10_ARATH RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2
SV=1
Length = 251
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 58/98 (59%), Gaps = 12/98 (12%)
Query: 65 RRRRRFVFAPGQDPAVALRA-------GLDPAILRKIPVVAFNQQDFKDGL--ECAVCLS 115
RR RF+ + +P +L + G+ LR PVV+++ + GL EC +CLS
Sbjct: 84 RRSTRFMIS---EPVPSLSSTRGSSNKGIKKKALRMFPVVSYSPEMNLPGLDEECVICLS 140
Query: 116 ELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRN 153
+ GE+ RLLPKCNHGFHV CID W Q H TCP CRN
Sbjct: 141 DFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRN 178
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 86 LDPAILRKIPVVAFNQQD-FKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQS 144
LD ++++ I V + + D F + +C+VCLSE ++ E RLLPKCNH FHV CID W +S
Sbjct: 134 LDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKS 193
Query: 145 HSTCPLCR 152
HS CPLCR
Sbjct: 194 HSNCPLCR 201
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 22/156 (14%)
Query: 24 MVIAIIVLFFVVVFILFLHLY-----AKWFWWRIEQTPEPSPSRRHRRRRRFVFAPGQDP 78
+V+ I VLF V+ F++F ++ A++ I ++ + + R RR
Sbjct: 51 VVVVITVLFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLT------- 103
Query: 79 AVALRAGLDPAILRKIPVVAFNQQDF----KDGLECAVCLSELEDGEKARLLPKCNHGFH 134
GLD + P +++ K G+ECAVCL E ED E RL+P C H FH
Sbjct: 104 ----ARGLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFH 159
Query: 135 VECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSVE 170
+C+D+W HSTCPLCR D+ + G+ + S E
Sbjct: 160 ADCVDVWLSEHSTCPLCR--ADLVLNQQGDDDDSTE 193
>sp|Q9LZV8|ATL74_ARATH RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2
SV=1
Length = 159
Score = 87.8 bits (216), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 80 VALRAGLDPAILRKIPVVAFNQQDFK-DGLECAVCLSELEDGEKARLLPKCNHGFHVECI 138
VA RAGL L+K PV + + K ECA+CL E DGE+ R+LP CNH FH+ CI
Sbjct: 74 VADRAGLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCI 133
Query: 139 DMWFQSHSTCPLCRNPV 155
D W SHS+CP CR+ +
Sbjct: 134 DTWLVSHSSCPNCRHSL 150
>sp|Q9FLC6|ATL73_ARATH RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2
SV=1
Length = 176
Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 72 FAPGQDPA---VALRAGLDPAILRKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLPK 128
F P +DP + G+ L+ IPV +++ + EC +CL + +GE R+LPK
Sbjct: 72 FTPNEDPVDTNANVAKGIKKRALKVIPVDSYSPELKMKATECLICLGDFVEGETVRVLPK 131
Query: 129 CNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNG 165
CNHGFHV+CID W SHS+CP CR + +E NG
Sbjct: 132 CNHGFHVKCIDTWLLSHSSCPTCRQSL-LEHQTPANG 167
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 84 AGLDPAILRKIPVVAFNQ-QDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWF 142
GL + + I VV F + + DG EC+VCL+E E+ E RLLPKC+H FH+ CID W
Sbjct: 108 VGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWL 167
Query: 143 QSHSTCPLCRNPV 155
SH CPLCR PV
Sbjct: 168 LSHKNCPLCRAPV 180
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 4/148 (2%)
Query: 24 MVIAIIVLFFVVVFILFLHLYAKWF--WWRIEQTPEPSPSRRHRRR--RRFVFAPGQDPA 79
M + I +L + F+ F +Y + F P R R RR +
Sbjct: 50 MALTIFILLVALFFMGFFSVYFRHFADSSSSTVDISSMPRTRSSRMSPRRLSTSVVVSRP 109
Query: 80 VALRAGLDPAILRKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECID 139
+ R GLD +R +PV + + + +C +CLS+ E+GE +++P C H FHV+C+D
Sbjct: 110 YSFRRGLDSQAVRSLPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVD 169
Query: 140 MWFQSHSTCPLCRNPVDVERSNNGNGEP 167
W S+ TCPLCR+ + G EP
Sbjct: 170 TWLSSYVTCPLCRSNQLFSDKDLGMQEP 197
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 76 QDPAVALR---AGLDPAILRKIPVVAF--NQQDFK-DGLECAVCLSELEDGEKARLLPKC 129
QD AL AGLD +++KI +Q FK +G +C++CL E + E RLLPKC
Sbjct: 115 QDDPFALESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKC 174
Query: 130 NHGFHVECIDMWFQSHSTCPLCRNPVDV 157
NH FHV CID W +SHS CPLCR + V
Sbjct: 175 NHTFHVVCIDRWLKSHSNCPLCRAKIIV 202
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 25/139 (17%)
Query: 24 MVIAIIVLFFVVVFILFLHLYAKWFWWRIEQTPEPSPS------RRHRRRRRFVFAPGQD 77
M I +IVL V F+ F +Y + R+ +P+ +R++ R
Sbjct: 63 MAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQAR-------- 114
Query: 78 PAVALRAGLDPAILRKIPVVAFNQ----QDFKDGLECAVCLSELEDGEKARLLPKCNHGF 133
GLD +I+ P ++ + K+ LEC+VCL+E ED E RL+PKC H F
Sbjct: 115 -------GLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVF 167
Query: 134 HVECIDMWFQSHSTCPLCR 152
H CID W +SH+TCPLCR
Sbjct: 168 HPGCIDAWLRSHTTCPLCR 186
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 79/175 (45%), Gaps = 23/175 (13%)
Query: 6 GDENGFQNTGSLEITGQIMVIAIIVLFFVVVFILFLHLYAKWFWWRIEQTPEPSPSRRHR 65
G N N G L ++V+ +I F F+ F +Y + P+ S
Sbjct: 34 GPTNQPYNYGRLSPAMAVIVVILIAALF---FMGFFSIYFR----HCSGVPDAGVSPAGG 86
Query: 66 RRRRFVFAPGQDPAVALRAGLDPAILRKIPVVAFN----QQDFKDGLECAVCLSELEDGE 121
R R A GLD +++ P ++ Q+ K LECA+CL+E ED E
Sbjct: 87 ARSRATVN-------AAARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDE 139
Query: 122 KARLLPKCNHGFHVECIDMWFQSHSTCPLCR-----NPVDVERSNNGNGEPSVEI 171
RLLPKC+H FH CID W ++H TCP+CR + E G EP +E+
Sbjct: 140 TLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAEGESVEPGGTEPDLEL 194
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 84 AGLDPAILRKIPVVAFNQQD-FKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWF 142
+GLD ++ KI V + + D F +C+VCL E DGE RLLP+C+H FH +CID W
Sbjct: 130 SGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWL 189
Query: 143 QSHSTCPLCR 152
+SHS CPLCR
Sbjct: 190 KSHSNCPLCR 199
>sp|O49691|ATL29_ARATH RING-H2 finger protein ATL29 OS=Arabidopsis thaliana GN=ATL29 PE=3
SV=1
Length = 289
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 23 IMVIAIIVLFFVVVFILFLHLYAKWFWWRIEQTPEPSPSRRHRRRRRFVFAPGQDP-AVA 81
I+ + ++V FF+ F L+ + K F + Q R H P Q P A
Sbjct: 26 ILTVILLVFFFIGFFTLY---FCKCFLDTMVQA-----WRLHHGGDTVSDNPLQQPEAPP 77
Query: 82 LRAGLDPAILRKIPVVAF----NQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVEC 137
+ GL+ I+ P + + ++ K GLECA+CL E + RLL C H FH EC
Sbjct: 78 VNPGLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLLTTCYHVFHQEC 137
Query: 138 IDMWFQSHSTCPLCRNPVDVERSNNGNGEPSV-EIDIQNSQES 179
ID+WF+SH TCP+CR +D N +P+V E+ I QE+
Sbjct: 138 IDLWFESHRTCPVCRRDLDPPPPPE-NTKPTVDEMIIDVIQET 179
>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
SV=1
Length = 181
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 80 VALRAGLDPAILRKIPVVAFNQQ--DFKDGLECAVCLSELEDGEKARLLPKCNHGFHVEC 137
+A GL L++IPV + D K EC +CL + EDGEK R+LPKCNHGFHV C
Sbjct: 83 LAAATGLKKQALKQIPVGLYGSGIIDMK-ATECLICLGDFEDGEKVRVLPKCNHGFHVRC 141
Query: 138 IDMWFQSHSTCPLCRNPVDVER 159
ID W S S+CP CR + +E+
Sbjct: 142 IDTWLLSRSSCPTCRQSLLLEQ 163
>sp|Q6NML0|ATL76_ARATH E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana GN=ATL76
PE=1 SV=1
Length = 225
Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 85 GLDPAILRKIPVVAFNQQDFKDGL--ECAVCLSELEDGEKARLLPKCNHGFHVECIDMWF 142
G+ LR PVV+++++ G+ EC +CLS+ GE+ RLLPKCNHGFHV CID W
Sbjct: 108 GIKKKALRMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWL 167
Query: 143 QSHSTCPLCRN 153
Q H TCP CR+
Sbjct: 168 QHHLTCPKCRH 178
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 10/138 (7%)
Query: 25 VIAIIVLFFVVVFILF--LHLYAKWFWWRIEQTPEPSPSRRHRRRRRFVFAPGQD----- 77
I+II + V+ IL L AK+F + + + + + + QD
Sbjct: 82 AISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDREQVD 141
Query: 78 -PAVALRA-GLDPAILRKIPVVAFNQQD-FKDGLECAVCLSELEDGEKARLLPKCNHGFH 134
P +R GL +I+ I + + + D + +C VCL+E E+ E RLLPKCNH FH
Sbjct: 142 HPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFH 201
Query: 135 VECIDMWFQSHSTCPLCR 152
+ CID W SH+ CPLCR
Sbjct: 202 ISCIDTWLSSHTNCPLCR 219
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 76/151 (50%), Gaps = 20/151 (13%)
Query: 5 DGDENGF-QNTGSLEITGQIMVIAIIVLFFVVVFILFLHLYAKWFWWRIEQTPEPSPSRR 63
D D+ F QN+ S + + +I ++ + +++ + +LYAK+
Sbjct: 9 DSDDRSFWQNSTSYDASSKIFLVTTVSFSIIIIIVFVYYLYAKFVL-------------- 54
Query: 64 HRRR--RRFVFAPGQDPAVALRAGLDPAILRKIPVVAFNQQDFKDGLECAVCLSELEDGE 121
HRR + F+ P + GLD ++ +P ++ G ECAVCLS LE+ +
Sbjct: 55 HRRSAFQDLSFSVVSQPP---KRGLDSLVIASLPTFVVGIKNDVAGTECAVCLSLLEEKD 111
Query: 122 KARLLPKCNHGFHVECIDMWFQSHSTCPLCR 152
AR+LP C H FHV C+D W + STCP+CR
Sbjct: 112 NARMLPNCKHVFHVSCVDTWLTTQSTCPVCR 142
>sp|Q9SN28|ATL7_ARATH RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2
SV=1
Length = 236
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 9/132 (6%)
Query: 22 QIMVIAIIVLF-FVVVFILFLHLYAKWFWWRIEQTPEPSPSRRHRRRRRFVFAPGQDPAV 80
Q + ++ + F F+V+F+L++ + R T S R FV P +
Sbjct: 30 QAFIFSVPICFTFIVLFVLYV------IYLRRNSTTNVDWSSLGMRGGTFV--PTNNNLS 81
Query: 81 ALRAGLDPAILRKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDM 140
GL I +PVV + + +C+VCL + + EK + +P C H FH+ECID+
Sbjct: 82 TAELGLSKDIREMLPVVIYKESFIVKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDL 141
Query: 141 WFQSHSTCPLCR 152
W SH+TCPLCR
Sbjct: 142 WLTSHTTCPLCR 153
>sp|Q94BY6|ATL75_ARATH RING-H2 finger protein ATL75 OS=Arabidopsis thaliana GN=ATL75 PE=2
SV=1
Length = 226
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 85 GLDPAILRKIPVVAFNQQDFKDGL--ECAVCLSELEDGEKARLLPKCNHGFHVECIDMWF 142
G++ LR PVV+++ + GL EC +CLS+ GE+ R+LPKC+HGFHV CID W
Sbjct: 109 GINKKALRMFPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWL 168
Query: 143 QSHSTCPLCRN 153
Q H TCP CR+
Sbjct: 169 QQHLTCPKCRH 179
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Query: 85 GLDPAILRKIPVVAFN----QQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDM 140
GLD + P ++ Q+ K LECA+CL+E ED E RLLPKC+H FH CI
Sbjct: 95 GLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGA 154
Query: 141 WFQSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQNSQES 179
W Q H TCP+CR + + E VE D++ Q+S
Sbjct: 155 WLQGHVTCPVCRTNLAEQTPEP---EVVVETDLEAQQQS 190
>sp|Q9LM69|ATL80_ARATH RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1
SV=1
Length = 197
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 9/141 (6%)
Query: 24 MVIAIIVLFFVVVFILFLHLYAKWFWWRIEQTPEPSPSRRHRRRRRFVFAPGQDPAVALR 83
+V+ + L ++ +L L ++ W R + S + Q P A
Sbjct: 30 LVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRTVSGSQTQS-------PQPPVAAAN 82
Query: 84 AGLDPAILRKIPVVAFNQQ--DFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMW 141
GL +L+ +P + F+ + + + ECA+CL+E G++ R+LP+C HGFHV CID W
Sbjct: 83 KGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTW 142
Query: 142 FQSHSTCPLCRNPVDVERSNN 162
SHS+CP CR + V R +
Sbjct: 143 LGSHSSCPSCRQILVVARCHK 163
>sp|Q8LC69|ATL8_ARATH RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2
SV=2
Length = 185
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 14/141 (9%)
Query: 24 MVIAIIVLFFVVVFILFLHLYAKWFWWRIEQTPEPSPSRRHRRRRRFVFAPGQDPAVALR 83
+V+ + VL + I+ L ++ W R R R R P P A
Sbjct: 28 LVLILAVLLCALTCIIGLIAVSRCAWLR----------RIASRNRSDQTHP--PPVAAAN 75
Query: 84 AGLDPAILRKIPVVAF--NQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMW 141
GL +LR +P + + + + +ECA+CL+E G++ R+LP+C HGFHV CID W
Sbjct: 76 KGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTW 135
Query: 142 FQSHSTCPLCRNPVDVERSNN 162
SHS+CP CR + V R +
Sbjct: 136 LGSHSSCPSCRQILVVTRCHK 156
>sp|Q9LQM2|ATL81_ARATH RING-H2 finger protein ATL81 OS=Arabidopsis thaliana GN=ATL81 PE=2
SV=1
Length = 332
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 61 SRRHRRRRRFVFAPGQDPAVALRAGLDPAILRKIPVVAFNQQDFKDGLECAVCLSELEDG 120
+ R+R R + P P GLD I+ P ++ +D +C++CL+E D
Sbjct: 109 NHRNRNRPSNLIQPSNPPE---NLGLDSKIIESFPEYPYSVKDHGTD-QCSICLTEFMDD 164
Query: 121 EKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSV-EIDIQNSQ 177
+ RL+ CNH FH CID+WF+ H TCP+CR +DVE + V EID+ S+
Sbjct: 165 DTIRLISTCNHSFHTICIDLWFEGHKTCPVCRRELDVEDRTSLEKPLEVPEIDLVRSE 222
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 8/113 (7%)
Query: 68 RRFVFAPGQDPAVA-LRAGLDPAILRKIPVVAFNQ----QDFKDGLECAVCLSELEDGEK 122
R + A GQD + R GL+ ++ P +++ + K G+ECA+CLSE ED E
Sbjct: 76 REEIGAAGQDVLHSRARRGLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQET 135
Query: 123 ARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQN 175
R +P C+H FH CID+W S STCP+CR + ++ G P + +D++
Sbjct: 136 LRWMPPCSHTFHANCIDVWLSSWSTCPVCRANLSLK---PGESYPYLNMDVET 185
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 27/148 (18%)
Query: 25 VIAIIVLFFVVVFIL-FLHLYAKWFWW--------RIEQTPEPSPSRRHRRRRRFVFAPG 75
V+ +IV+ V+ FI LHL ++ R + PE S S +R+ + +F
Sbjct: 45 VLFVIVILAVLFFISGLLHLLVRFLIKHPSATASSRSNRFPEISTSDALQRQLQQLFHLN 104
Query: 76 QDPAVALRAGLDPAILRKIPVVAFNQ-----------QDFKDGLECAVCLSELEDGEKAR 124
+GLD A + +PV + + ++ +CAVCL E + +K R
Sbjct: 105 D-------SGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLR 157
Query: 125 LLPKCNHGFHVECIDMWFQSHSTCPLCR 152
LLP C+H FH+ CID W QS+STCPLCR
Sbjct: 158 LLPMCSHAFHLNCIDTWLQSNSTCPLCR 185
>sp|Q9FIR0|ATL30_ARATH RING-H2 finger protein ATL30 OS=Arabidopsis thaliana GN=ATL30 PE=2
SV=1
Length = 289
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Query: 24 MVIAIIVLFFVVVFILFLHLY-AKWFWWRIEQTPEPSPSRRHRRRRRFVFAPGQDPAVA- 81
+VI + V+ VV FI F +Y K F+ + E H Q+P
Sbjct: 25 LVIILTVILLVVFFIGFFAIYFCKCFYHTLT---EAWNHHYHNGLPENQIQAQQEPVQPP 81
Query: 82 LRAGLDPAILRKIPVVAF----NQQDFKDGLECAVCLSELEDGE-KARLLPKCNHGFHVE 136
+ GL+P I++ P+ F + ++ K GLECA+CL E E+ RLL C H FH E
Sbjct: 82 VNPGLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEEEHILLRLLTTCYHVFHQE 141
Query: 137 CIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQNSQESLESGYSTDS 188
CID W +S+ TCP+CR +D N E +E+ +N+ E+ + ++ S
Sbjct: 142 CIDQWLESNKTCPVCRRNLDPNAPENIK-ELIIEVIQENAHENRDQEQTSTS 192
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 62/104 (59%), Gaps = 5/104 (4%)
Query: 82 LRAGLDPAILRKIPVVAFNQ-QDFK---DGLECAVCLSELEDGEKARLLPKCNHGFHVEC 137
+R G+D ++ P +++ + FK G+ECA+CL E ED E R +P C+H FH C
Sbjct: 88 VRRGIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANC 147
Query: 138 IDMWFQSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQNSQESLE 181
ID W S STCP+CR + + +S + PS++++ N+Q ++
Sbjct: 148 IDEWLSSRSTCPVCRANLSL-KSGDSFPHPSMDVETGNAQRGVQ 190
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 23 IMVIAIIVLFFVVVFILFLHLYAKWFWWRIEQTPEPSPSRRHRRRRRFVFAPGQDPAVAL 82
++ + I L ++VF+ L+L K+ R T P P + +P L
Sbjct: 119 VLCLVISGLALIIVFLGVLYLIFKFL--RKSSTLFPIPHFNYNPDLFSFSSPQLQHLFFL 176
Query: 83 R-AGLDPAILRKIPVVAFNQQ--DFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECID 139
+GLD + +PV + + +CAVCL+E D +K RLLP C+H FH+ CID
Sbjct: 177 HDSGLDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCID 236
Query: 140 MWFQSHSTCPLCR 152
W S+STCPLCR
Sbjct: 237 TWLLSNSTCPLCR 249
>sp|Q570X5|ATL58_ARATH RING-H2 finger protein ATL58 OS=Arabidopsis thaliana GN=ATL58 PE=2
SV=1
Length = 261
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 98/231 (42%), Gaps = 23/231 (9%)
Query: 1 MSASDGD-ENGFQNTGSLEIT-GQIMVIAIIVLFFVVVFILFLHLYAKWFWWRIEQTPEP 58
MS S+ + EN T S E+ Q + ++ + F ++ LF +Y +
Sbjct: 1 MSYSNSNPENYSAATSSPELKLYQAFIFSVPICFTFIILFLFYLIYLRRSS--------- 51
Query: 59 SPSRRHRRRRRFVFAPGQDPAVALRAGLDPAILRKIPVVAFNQQDFKDGLECAVCLSELE 118
S R F PG + + GL + +P+V F + +C+VCL + +
Sbjct: 52 --SDLSSLGMRTTFIPGNSLS-TIELGLSKELREMLPIVVFKESFTVMDSQCSVCLGDYQ 108
Query: 119 DGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGE-------PSVEI 171
+K + +P C H FH++CID+W SH+TCPLCR + RS + P E+
Sbjct: 109 PNDKLQQIPVCKHTFHMDCIDLWLTSHTTCPLCRLALIPSRSRQSQDDPVPSLVSPDEEV 168
Query: 172 DIQNSQESLESGYSTDSPPNFPTNVLFWGNENLVSSAGVCVHEGVSSSSSS 222
Q E + + P + P N G + S V H GVSS S
Sbjct: 169 SSQPESEPVNHRVVSTQPESEPVN--HSGVSSQPESQPVVNHRGVSSQPES 217
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 84 AGLDPAILRKIPVVAFNQ-QDFK-DGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMW 141
+G+D +++ +PV + K +C VCL E E +K RLLPKC+H FHVECID W
Sbjct: 98 SGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTW 157
Query: 142 FQSHSTCPLCR 152
SHSTCPLCR
Sbjct: 158 LLSHSTCPLCR 168
>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
GN=ATL50 PE=3 SV=1
Length = 210
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 33/185 (17%)
Query: 24 MVIAIIVLFFVVVFILF-----LHLYAKWFW---WRIEQT----PEPSPSRRHRRRRRFV 71
M+ I++L+ ++ I+F +HL K+ R++ E S + + R + RF
Sbjct: 31 MISPIVLLYITLLSIIFFVAALIHLLVKFLHRPQTRLDDAYDGITESSTALQGRYQTRFN 90
Query: 72 FAPGQDPAVALRAGLDPAILRKIPVVAFN-----QQDFKDGLECAVCLSELEDGEKARLL 126
+ +D + + +P++ + + D D CAVCL E ++ RLL
Sbjct: 91 LHDAE---------IDQSFIDALPLLHYKTMIGLRHDLSD---CAVCLREFTAEDELRLL 138
Query: 127 PKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSV----EIDIQNSQESLES 182
PKC+H FHVECID W ++STCPLCR+ + + ++ E D NSQ+S S
Sbjct: 139 PKCSHAFHVECIDTWLLTNSTCPLCRDNLLLLGLTGTASSSTIVLVHESDGDNSQDSDSS 198
Query: 183 GYSTD 187
TD
Sbjct: 199 FMLTD 203
>sp|Q9LUZ9|ATL63_ARATH RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2
SV=1
Length = 308
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 85 GLDPAILRKIPVVAFNQQDFKDGLE--CAVCLSELEDGEKARLLPKCNHGFHVECIDMWF 142
GLD +++ IP+ + + + ++ E C +CL E G+ R L C HGFHVECIDMW
Sbjct: 111 GLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWL 170
Query: 143 QSHSTCPLCRNPV 155
SHSTCPLCR+PV
Sbjct: 171 SSHSTCPLCRSPV 183
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114,446,067
Number of Sequences: 539616
Number of extensions: 4791285
Number of successful extensions: 51650
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 445
Number of HSP's that attempted gapping in prelim test: 37066
Number of HSP's gapped (non-prelim): 6991
length of query: 309
length of database: 191,569,459
effective HSP length: 117
effective length of query: 192
effective length of database: 128,434,387
effective search space: 24659402304
effective search space used: 24659402304
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)