Query 021709
Match_columns 308
No_of_seqs 165 out of 2647
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 08:08:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021709.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021709hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kh5_A Protein MJ1225; AMPK, A 100.0 2.6E-32 8.7E-37 236.9 18.0 223 1-264 30-278 (280)
2 3ddj_A CBS domain-containing p 100.0 8.3E-32 2.8E-36 235.9 17.0 226 1-269 46-287 (296)
3 3t4n_C Nuclear protein SNF4; C 100.0 2E-30 6.9E-35 229.9 19.3 230 1-267 58-320 (323)
4 2yzq_A Putative uncharacterize 100.0 3.5E-30 1.2E-34 223.8 17.9 219 1-265 27-277 (282)
5 2qrd_G Protein C1556.08C; AMPK 100.0 8.2E-29 2.8E-33 220.5 20.0 232 1-269 50-317 (334)
6 2v8q_E 5'-AMP-activated protei 100.0 4E-28 1.4E-32 215.7 19.0 235 1-268 63-324 (330)
7 3ddj_A CBS domain-containing p 99.9 6.5E-25 2.2E-29 192.0 17.8 200 35-267 14-214 (296)
8 3kh5_A Protein MJ1225; AMPK, A 99.9 1.1E-23 3.6E-28 182.5 20.4 195 44-266 7-204 (280)
9 2yzq_A Putative uncharacterize 99.9 5.3E-24 1.8E-28 184.7 13.3 176 42-262 2-179 (282)
10 3t4n_C Nuclear protein SNF4; C 99.9 8E-22 2.7E-26 174.5 20.0 206 39-267 28-248 (323)
11 2v8q_E 5'-AMP-activated protei 99.9 2.6E-21 8.8E-26 171.7 19.5 203 40-266 34-250 (330)
12 2qrd_G Protein C1556.08C; AMPK 99.9 2E-20 7E-25 166.2 19.9 207 40-266 21-242 (334)
13 3k6e_A CBS domain protein; str 99.8 1.4E-20 4.9E-25 148.9 13.5 128 142-271 15-146 (156)
14 3lv9_A Putative transporter; C 99.8 1.2E-19 4.2E-24 142.1 14.0 125 139-268 20-146 (148)
15 4esy_A CBS domain containing m 99.8 6.9E-21 2.4E-25 152.9 6.7 126 138-266 14-161 (170)
16 3hf7_A Uncharacterized CBS-dom 99.8 5.7E-20 1.9E-24 140.9 10.2 123 143-267 3-127 (130)
17 3i8n_A Uncharacterized protein 99.8 1.1E-19 3.8E-24 139.2 10.7 124 140-267 4-129 (130)
18 2ef7_A Hypothetical protein ST 99.8 9.1E-19 3.1E-23 134.4 15.7 126 141-270 3-128 (133)
19 3lhh_A CBS domain protein; str 99.8 2.4E-19 8.1E-24 144.2 12.7 127 139-270 39-167 (172)
20 4esy_A CBS domain containing m 99.8 7.2E-20 2.4E-24 147.0 8.7 143 38-197 15-158 (170)
21 3fv6_A YQZB protein; CBS domai 99.8 1.4E-18 4.9E-23 137.7 16.0 134 135-272 10-149 (159)
22 3lfr_A Putative metal ION tran 99.8 7.9E-20 2.7E-24 141.2 7.9 124 143-269 4-129 (136)
23 3gby_A Uncharacterized protein 99.8 3.8E-19 1.3E-23 135.8 11.3 123 141-267 4-126 (128)
24 3kpb_A Uncharacterized protein 99.8 9.9E-19 3.4E-23 132.1 12.6 117 143-266 2-119 (122)
25 3oco_A Hemolysin-like protein 99.8 3.9E-19 1.3E-23 140.1 10.6 126 140-270 18-146 (153)
26 2rc3_A CBS domain; in SITU pro 99.8 8.7E-19 3E-23 135.0 12.2 124 143-267 7-131 (135)
27 3nqr_A Magnesium and cobalt ef 99.8 2.1E-19 7.1E-24 137.1 8.6 121 143-267 4-126 (127)
28 2yzi_A Hypothetical protein PH 99.8 1.1E-18 3.8E-23 134.8 12.8 126 140-269 5-131 (138)
29 3jtf_A Magnesium and cobalt ef 99.8 5.8E-19 2E-23 135.0 11.0 122 141-268 4-127 (129)
30 1pbj_A Hypothetical protein; s 99.8 1.6E-18 5.3E-23 131.5 13.1 119 144-266 3-121 (125)
31 3ctu_A CBS domain protein; str 99.8 1.3E-18 4.3E-23 137.5 12.8 132 139-272 12-147 (156)
32 2rih_A Conserved protein with 99.8 2.7E-18 9.1E-23 133.3 14.4 121 142-267 5-128 (141)
33 3lqn_A CBS domain protein; csg 99.8 9E-19 3.1E-23 137.4 11.7 130 139-271 12-147 (150)
34 3fhm_A Uncharacterized protein 99.8 4.6E-19 1.6E-23 141.5 9.4 129 139-268 21-151 (165)
35 3l2b_A Probable manganase-depe 99.8 4E-18 1.4E-22 144.9 15.2 217 40-265 6-242 (245)
36 4fry_A Putative signal-transdu 99.8 7.8E-19 2.7E-23 138.9 10.1 128 143-271 8-139 (157)
37 2p9m_A Hypothetical protein MJ 99.8 3.3E-18 1.1E-22 132.1 13.2 125 139-267 5-136 (138)
38 3ocm_A Putative membrane prote 99.8 2.1E-18 7.1E-23 138.8 12.3 127 139-271 33-161 (173)
39 3k2v_A Putative D-arabinose 5- 99.8 2.2E-18 7.4E-23 135.1 11.6 121 141-263 27-148 (149)
40 2nyc_A Nuclear protein SNF4; b 99.8 5.3E-18 1.8E-22 131.8 13.4 124 141-267 7-141 (144)
41 1y5h_A Hypothetical protein RV 99.8 7.3E-19 2.5E-23 135.0 7.7 121 142-265 8-129 (133)
42 4gqw_A CBS domain-containing p 99.8 1.8E-18 6.3E-23 135.6 10.2 128 142-270 5-146 (152)
43 2o16_A Acetoin utilization pro 99.8 6.8E-18 2.3E-22 134.0 13.2 127 141-270 4-138 (160)
44 1o50_A CBS domain-containing p 99.8 1.2E-17 4.2E-22 132.0 14.3 122 143-267 17-153 (157)
45 3sl7_A CBS domain-containing p 99.8 2.1E-18 7.3E-23 139.3 9.9 130 143-272 5-161 (180)
46 3kxr_A Magnesium transporter, 99.8 2.2E-17 7.4E-22 136.4 15.5 124 139-271 51-178 (205)
47 2emq_A Hypothetical conserved 99.8 1.2E-17 4.1E-22 131.9 13.1 131 139-272 8-144 (157)
48 3lv9_A Putative transporter; C 99.8 3.3E-17 1.1E-21 128.2 15.3 136 20-200 4-144 (148)
49 2uv4_A 5'-AMP-activated protei 99.7 1.5E-17 5.1E-22 130.8 13.2 114 152-266 29-150 (152)
50 1pvm_A Conserved hypothetical 99.7 8.2E-18 2.8E-22 136.7 12.0 125 141-267 8-133 (184)
51 3oi8_A Uncharacterized protein 99.7 3.2E-18 1.1E-22 135.3 8.8 119 139-262 35-155 (156)
52 1yav_A Hypothetical protein BS 99.7 1.5E-17 5.2E-22 131.7 11.5 130 139-271 11-146 (159)
53 2j9l_A Chloride channel protei 99.7 2.5E-17 8.6E-22 133.6 12.6 133 138-271 7-169 (185)
54 3lhh_A CBS domain protein; str 99.7 7.5E-17 2.6E-21 129.5 13.8 141 16-201 19-164 (172)
55 2pfi_A Chloride channel protei 99.7 6.9E-17 2.4E-21 128.3 13.5 128 140-271 11-151 (164)
56 1vr9_A CBS domain protein/ACT 99.7 3.9E-17 1.4E-21 135.8 12.0 161 40-251 12-175 (213)
57 1vr9_A CBS domain protein/ACT 99.7 2.1E-16 7E-21 131.4 14.3 120 141-269 12-132 (213)
58 3kpb_A Uncharacterized protein 99.7 1.8E-16 6.2E-21 119.6 12.6 116 41-200 1-118 (122)
59 1pbj_A Hypothetical protein; s 99.7 2.9E-16 1E-20 118.9 13.4 119 42-199 2-120 (125)
60 2ef7_A Hypothetical protein ST 99.7 2.6E-16 8.8E-21 120.6 13.3 122 39-200 2-124 (133)
61 3fhm_A Uncharacterized protein 99.7 2.6E-16 8.9E-21 125.4 13.8 126 36-199 19-148 (165)
62 3gby_A Uncharacterized protein 99.7 1.8E-16 6E-21 120.9 11.9 120 39-198 3-123 (128)
63 3i8n_A Uncharacterized protein 99.7 1.4E-16 4.8E-21 121.8 11.2 121 38-200 3-128 (130)
64 3jtf_A Magnesium and cobalt ef 99.7 1.3E-16 4.4E-21 121.9 10.0 118 39-200 3-125 (129)
65 2o16_A Acetoin utilization pro 99.7 4.8E-16 1.6E-20 123.2 13.5 129 40-199 4-133 (160)
66 3k6e_A CBS domain protein; str 99.7 2.5E-16 8.5E-21 124.4 11.5 123 41-200 15-141 (156)
67 2rc3_A CBS domain; in SITU pro 99.7 5.7E-16 1.9E-20 119.1 13.2 120 42-199 7-129 (135)
68 4fry_A Putative signal-transdu 99.7 4.8E-16 1.6E-20 122.7 13.0 137 41-216 7-149 (157)
69 2oux_A Magnesium transporter; 99.7 3.4E-16 1.2E-20 135.9 12.8 122 140-270 135-262 (286)
70 3ocm_A Putative membrane prote 99.7 9.4E-16 3.2E-20 123.2 14.2 140 16-201 13-157 (173)
71 3oco_A Hemolysin-like protein 99.7 2.9E-16 1E-20 123.5 10.6 120 38-200 17-142 (153)
72 1o50_A CBS domain-containing p 99.7 1.2E-15 4E-20 120.5 14.0 140 35-199 10-151 (157)
73 3nqr_A Magnesium and cobalt ef 99.7 7E-17 2.4E-21 122.9 6.6 118 40-199 2-124 (127)
74 3fv6_A YQZB protein; CBS domai 99.7 1.4E-15 4.8E-20 120.4 14.4 125 38-200 14-143 (159)
75 3hf7_A Uncharacterized CBS-dom 99.7 7.3E-16 2.5E-20 117.8 12.2 120 41-200 2-126 (130)
76 2yvy_A MGTE, Mg2+ transporter 99.7 7.8E-16 2.7E-20 133.2 13.3 120 139-267 132-257 (278)
77 3kxr_A Magnesium transporter, 99.7 1E-15 3.5E-20 126.3 13.3 120 36-200 49-173 (205)
78 2rih_A Conserved protein with 99.7 1.7E-15 5.9E-20 117.3 13.7 116 40-196 4-123 (141)
79 2d4z_A Chloride channel protei 99.7 7.1E-16 2.4E-20 130.7 12.5 125 140-267 11-246 (250)
80 2yzi_A Hypothetical protein PH 99.7 4E-15 1.4E-19 114.6 15.7 123 37-199 3-127 (138)
81 3k2v_A Putative D-arabinose 5- 99.7 1.4E-15 4.7E-20 119.1 12.9 117 41-196 28-147 (149)
82 2pfi_A Chloride channel protei 99.7 1.5E-15 5E-20 120.6 13.1 131 38-201 10-147 (164)
83 3lfr_A Putative metal ION tran 99.6 2.9E-16 1E-20 121.0 8.2 118 40-198 2-124 (136)
84 2p9m_A Hypothetical protein MJ 99.6 8.2E-16 2.8E-20 118.5 10.2 122 38-199 5-134 (138)
85 2d4z_A Chloride channel protei 99.6 1E-14 3.5E-19 123.5 17.7 161 37-201 9-245 (250)
86 3lqn_A CBS domain protein; csg 99.6 1.4E-15 4.8E-20 119.0 11.3 127 38-200 12-142 (150)
87 4gqw_A CBS domain-containing p 99.6 1.6E-15 5.3E-20 118.7 11.4 132 40-200 4-142 (152)
88 3oi8_A Uncharacterized protein 99.6 3.6E-16 1.2E-20 123.4 7.5 119 35-196 32-155 (156)
89 2nyc_A Nuclear protein SNF4; b 99.6 2.5E-15 8.4E-20 116.6 11.8 127 38-200 5-140 (144)
90 2emq_A Hypothetical conserved 99.6 6.2E-15 2.1E-19 116.2 13.5 128 37-200 7-138 (157)
91 3sl7_A CBS domain-containing p 99.6 1.4E-15 4.6E-20 122.7 9.2 150 40-201 3-156 (180)
92 1y5h_A Hypothetical protein RV 99.6 2.6E-15 8.8E-20 115.0 9.9 118 41-196 8-126 (133)
93 3ctu_A CBS domain protein; str 99.6 5.1E-15 1.7E-19 116.6 11.8 126 38-200 12-141 (156)
94 2j9l_A Chloride channel protei 99.6 8.5E-15 2.9E-19 118.6 12.9 147 39-200 9-164 (185)
95 1pvm_A Conserved hypothetical 99.6 1.3E-14 4.4E-19 117.6 13.5 119 40-196 8-128 (184)
96 3pc3_A CG1753, isoform A; CBS, 99.6 4.8E-15 1.7E-19 139.2 11.9 124 141-269 383-513 (527)
97 1yav_A Hypothetical protein BS 99.6 6.1E-15 2.1E-19 116.6 10.5 128 37-200 10-141 (159)
98 2zy9_A Mg2+ transporter MGTE; 99.6 1.3E-14 4.6E-19 134.2 13.8 120 140-268 153-278 (473)
99 2uv4_A 5'-AMP-activated protei 99.6 1.7E-14 5.7E-19 113.2 12.2 123 38-198 20-148 (152)
100 2oux_A Magnesium transporter; 99.6 1.7E-14 5.8E-19 125.2 11.8 120 36-200 132-258 (286)
101 2yvy_A MGTE, Mg2+ transporter 99.6 4.1E-14 1.4E-18 122.3 13.0 118 37-199 131-255 (278)
102 3org_A CMCLC; transporter, tra 99.5 2.3E-15 8E-20 144.1 5.5 122 141-264 452-622 (632)
103 3usb_A Inosine-5'-monophosphat 99.5 8.8E-14 3E-18 129.5 12.9 116 144-267 115-234 (511)
104 4fxs_A Inosine-5'-monophosphat 99.5 9.8E-15 3.4E-19 135.4 3.6 114 144-265 91-207 (496)
105 3pc3_A CG1753, isoform A; CBS, 99.5 6.1E-14 2.1E-18 131.7 8.2 122 38-200 381-510 (527)
106 2zy9_A Mg2+ transporter MGTE; 99.5 5.1E-13 1.7E-17 123.6 12.9 120 36-200 150-276 (473)
107 1zfj_A Inosine monophosphate d 99.4 1.1E-12 3.7E-17 122.3 14.4 116 144-267 92-211 (491)
108 4af0_A Inosine-5'-monophosphat 99.4 5.9E-15 2E-19 134.2 -1.6 137 121-266 116-257 (556)
109 1me8_A Inosine-5'-monophosphat 99.4 7.5E-15 2.6E-19 136.8 -1.6 115 148-269 103-223 (503)
110 3org_A CMCLC; transporter, tra 99.4 1.4E-13 4.8E-18 131.8 6.6 156 39-196 451-620 (632)
111 4avf_A Inosine-5'-monophosphat 99.4 1.8E-14 6.2E-19 133.5 0.2 115 144-266 90-206 (490)
112 3l2b_A Probable manganase-depe 99.4 2.1E-12 7.3E-17 109.3 13.1 167 1-196 33-239 (245)
113 3ghd_A A cystathionine beta-sy 99.4 1.6E-12 5.5E-17 87.6 8.4 69 154-222 2-70 (70)
114 1vrd_A Inosine-5'-monophosphat 99.4 4.4E-14 1.5E-18 131.8 0.3 116 144-267 97-215 (494)
115 3usb_A Inosine-5'-monophosphat 99.4 5.5E-12 1.9E-16 117.4 13.9 159 43-250 115-279 (511)
116 1me8_A Inosine-5'-monophosphat 99.4 1.1E-13 3.7E-18 129.0 1.2 165 44-254 99-269 (503)
117 4fxs_A Inosine-5'-monophosphat 99.3 5.3E-12 1.8E-16 117.1 8.4 113 42-196 90-204 (496)
118 4avf_A Inosine-5'-monophosphat 99.3 2.7E-12 9.3E-17 119.0 4.8 115 42-198 89-204 (490)
119 2cu0_A Inosine-5'-monophosphat 99.2 8.5E-13 2.9E-17 122.6 0.3 111 145-265 96-206 (486)
120 1jcn_A Inosine monophosphate d 99.2 2.6E-13 8.7E-18 127.1 -4.2 118 143-266 109-232 (514)
121 1zfj_A Inosine monophosphate d 99.2 8.2E-11 2.8E-15 109.6 12.1 114 43-200 92-210 (491)
122 1vrd_A Inosine-5'-monophosphat 99.2 1.9E-11 6.6E-16 113.9 5.1 158 42-245 96-255 (494)
123 4af0_A Inosine-5'-monophosphat 99.1 1.9E-11 6.3E-16 111.5 3.8 107 45-196 142-253 (556)
124 2cu0_A Inosine-5'-monophosphat 99.1 1.4E-11 4.8E-16 114.4 2.2 162 43-256 95-257 (486)
125 3fio_A A cystathionine beta-sy 99.0 1.4E-09 4.6E-14 73.1 8.4 69 154-222 2-70 (70)
126 1jcn_A Inosine monophosphate d 99.0 2.6E-11 8.9E-16 113.5 -0.9 115 42-196 109-228 (514)
127 3ghd_A A cystathionine beta-sy 99.0 4.7E-10 1.6E-14 75.4 4.1 46 50-95 1-46 (70)
128 3fio_A A cystathionine beta-sy 98.6 1.3E-07 4.5E-12 63.1 6.6 48 219-267 2-49 (70)
129 1tif_A IF3-N, translation init 63.8 20 0.00067 23.7 5.5 34 5-38 12-45 (78)
130 1tif_A IF3-N, translation init 57.5 20 0.00069 23.6 4.7 28 239-266 12-39 (78)
131 1p0z_A Sensor kinase CITA; tra 36.5 26 0.0009 25.1 3.1 16 243-258 106-121 (131)
132 1svj_A Potassium-transporting 36.4 16 0.00053 27.7 1.8 34 228-262 121-154 (156)
133 3llb_A Uncharacterized protein 35.6 11 0.00037 25.1 0.7 26 282-307 16-41 (83)
134 3by8_A Sensor protein DCUS; hi 35.5 27 0.00092 25.6 3.0 26 161-186 41-68 (142)
135 3lae_A UPF0053 protein HI0107; 33.0 12 0.00042 24.6 0.7 28 280-307 14-41 (81)
136 3fan_A Non-structural protein; 32.6 23 0.00078 28.2 2.2 24 239-262 125-148 (213)
137 2rk5_A Putative hemolysin; str 29.6 14 0.00048 24.7 0.5 24 284-307 17-40 (87)
138 2w5e_A Putative serine proteas 28.6 34 0.0012 26.0 2.6 23 236-258 122-144 (163)
139 3tjo_A Serine protease HTRA1; 28.0 33 0.0011 27.5 2.6 21 239-259 187-207 (231)
140 2p3h_A Uncharacterized CBS dom 26.6 17 0.00057 25.3 0.4 23 285-307 22-44 (101)
141 3lgi_A Protease DEGS; stress-s 24.7 37 0.0013 27.3 2.3 21 238-258 173-193 (237)
142 2lrn_A Thiol:disulfide interch 23.9 1.8E+02 0.0061 20.7 6.0 34 239-272 109-143 (152)
143 3sti_A Protease DEGQ; serine p 23.6 44 0.0015 27.2 2.6 21 238-258 184-204 (245)
144 2r2z_A Hemolysin; APC85144, en 23.2 22 0.00074 24.1 0.5 22 286-307 27-48 (93)
145 3k6y_A Serine protease, possib 23.0 46 0.0016 26.6 2.6 21 239-259 181-201 (237)
146 2pli_A Uncharacterized protein 22.4 22 0.00076 24.0 0.4 23 285-307 28-50 (91)
147 2qkp_A Uncharacterized protein 22.4 60 0.002 23.9 2.9 20 242-261 110-130 (151)
148 2as9_A Serine protease; trypsi 22.0 45 0.0015 26.1 2.2 20 239-258 156-175 (210)
149 2p13_A CBS domain; alpha-beta 21.8 26 0.00088 23.5 0.7 23 285-307 25-49 (90)
150 2w7s_A Serine protease SPLA; h 20.6 57 0.002 25.1 2.6 21 239-259 152-172 (200)
No 1
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=100.00 E-value=2.6e-32 Score=236.90 Aligned_cols=223 Identities=18% Similarity=0.276 Sum_probs=187.7
Q ss_pred CCCCCcCEEEEECC-CCcEEEEEehhHHHHHHHH-------hcc------CCcccccccccccCceEEeCCCcHHHHHHH
Q 021709 1 MAARRVDALLLTDS-NALLCGILTDKDIATRVIA-------REL------NLEETPVSKVMTRNPTFVLSDTLAVEALQK 66 (308)
Q Consensus 1 m~~~~~~~~~V~~~-~~~~~Giit~~D~~~~~~~-------~~~------~~~~~~v~~im~~~~~~v~~~~~l~~a~~~ 66 (308)
|.+++++++||+|+ +++++|++|..|+++.+.. ... ...+.+++++|.++++++.+++++.+|++.
T Consensus 30 m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~ 109 (280)
T 3kh5_A 30 MNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLAAINEPVREIMEENVITLKENADIDEAIET 109 (280)
T ss_dssp HHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHHHTTSBGGGTSBCSCCCEETTCBHHHHHHH
T ss_pred HHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhHHhhhhHHHhcCCCCEEECCCCCHHHHHHH
Confidence 56789999999996 7899999999999854311 000 112458999999999999999999999999
Q ss_pred hHhCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhhccCCCCCChhHHHHHHHHHhcCCCcc
Q 021709 67 MVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLS 145 (308)
Q Consensus 67 m~~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 145 (308)
|.+++++++||+| +|+++|+++..|+++..... .....++.
T Consensus 110 ~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~--------------------------------------~~~~~~v~ 151 (280)
T 3kh5_A 110 FLTKNVGGAPIVNDENQLISLITERDVIRALLDK--------------------------------------IDENEVID 151 (280)
T ss_dssp HHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGG--------------------------------------SCTTCBSG
T ss_pred HHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhc--------------------------------------CCCCCCHH
Confidence 9999999999998 69999999999987542210 01223688
Q ss_pred cccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEeeCCEEEEEeeHHHHHHHHHhcCC-----------Cccccccccc
Q 021709 146 TIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNL-----------PADSTLVEKV 214 (308)
Q Consensus 146 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~~~~~-----------~~~~~~v~~~ 214 (308)
++|. +++.++++++++.++++.|.+++.+++||+++|+++|++|.+|++ +.+.... .....++.++
T Consensus 152 ~~m~--~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~~~~~~Givt~~dl~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 228 (280)
T 3kh5_A 152 DYIT--RDVIVATPGERLKDVARTMVRNGFRRLPVVSEGRLVGIITSTDFI-KLLGSDWAFNHMQTGNVREITNVRMEEI 228 (280)
T ss_dssp GGCB--CSCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH-HHHTSHHHHHHHHSCCTHHHHHCBHHHH
T ss_pred HHhC--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHH-HHHhhhhhhhhhcccchhhhhCCcHHHH
Confidence 8887 689999999999999999999999999999999999999999997 4443211 0124688999
Q ss_pred cccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHH
Q 021709 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264 (308)
Q Consensus 215 ~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~ 264 (308)
|.+++.++++++++.+++++|.+++.+++||+|++|+++|+||..||+++
T Consensus 229 m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Givt~~dil~~ 278 (280)
T 3kh5_A 229 MKRDVITAKEGDKLKKIAEIMVTNDIGALPVVDENLRIKGIITEKDVLKY 278 (280)
T ss_dssp SBSSCCCBCTTCBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHGGG
T ss_pred hcCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCeEEEEEeHHHHHHh
Confidence 99999999999999999999999999999999998999999999999975
No 2
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.98 E-value=8.3e-32 Score=235.91 Aligned_cols=226 Identities=20% Similarity=0.215 Sum_probs=190.6
Q ss_pred CCCCCcCEEEEECCCCcEEEEEehhHHHHHHHHhc---------cCCcccccccccccCceEEeCCCcHHHHHHHhHhCC
Q 021709 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARE---------LNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGK 71 (308)
Q Consensus 1 m~~~~~~~~~V~~~~~~~~Giit~~D~~~~~~~~~---------~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~ 71 (308)
|.+++++++||+| ++++|++|.+|+++.+.... ......+++++|.++++++.+++++.+|+++|.+++
T Consensus 46 m~~~~~~~~~V~d--~~l~GivT~~Di~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~ 123 (296)
T 3ddj_A 46 INEGGIGRIIVAN--EKIEGLLTTRDLLSTVESYCKDSCSQGDLYHISTTPIIDYMTPNPVTVYNTSDEFTAINIMVTRN 123 (296)
T ss_dssp TTGGGCCEEEEES--SSEEEEEEHHHHHGGGTTCC---CCHHHHHHHHTSBGGGTSEESCCCEETTSCHHHHHHHHHHHT
T ss_pred HHHCCCceEEEEC--CeEEEEEeHHHHHHHhcccccccccchhhHHHhcccHHHhccCCCEEEcCCCCHHHHHHHHHHcC
Confidence 7889999999999 88999999999985442110 112356899999999999999999999999999999
Q ss_pred CcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCC
Q 021709 72 FRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPE 150 (308)
Q Consensus 72 ~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 150 (308)
++++||+| +|+++|+++..|+++... ......++.++|.
T Consensus 124 ~~~lpVvd~~~~lvGivt~~dl~~~~~---------------------------------------~~~~~~~v~~~m~- 163 (296)
T 3ddj_A 124 FGSLPVVDINDKPVGIVTEREFLLLYK---------------------------------------DLDEIFPVKVFMS- 163 (296)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHGGGGG---------------------------------------GSCCCCBHHHHSB-
T ss_pred CCEEEEEcCCCcEEEEEeHHHHHHhhh---------------------------------------cccccccHHHhhc-
Confidence 99999997 689999999999875311 0012345778887
Q ss_pred CCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcCC-----CccccccccccccCceeecC
Q 021709 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-----PADSTLVEKVMTPNPECATI 224 (308)
Q Consensus 151 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~-----~~~~~~v~~~~~~~~~~v~~ 224 (308)
+++.++++++++.++++.|.+++++++||++ +|+++|++|.+|++..+..... .....++.++|.+++.++++
T Consensus 164 -~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~ 242 (296)
T 3ddj_A 164 -TKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKVVKDVMVTNLVTIDE 242 (296)
T ss_dssp -CSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCBHHHHSBCCCCBCCT
T ss_pred -CCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHHhhcChhhhcCcCHHHHhCCCCeEECC
Confidence 6899999999999999999999999999999 8999999999999744431110 11245889999999999999
Q ss_pred CCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHHh
Q 021709 225 DTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (308)
Q Consensus 225 ~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~~ 269 (308)
++++.+++++|.+++.+++||+|++|+++|+||..||++++....
T Consensus 243 ~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Dil~~l~~~~ 287 (296)
T 3ddj_A 243 LASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIALHHIL 287 (296)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999887644
No 3
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.97 E-value=2e-30 Score=229.87 Aligned_cols=230 Identities=16% Similarity=0.185 Sum_probs=183.1
Q ss_pred CCCCCcCEEEEECCC-CcEEEEEehhHHHHHHHHh---cc------CCcccc------cccccccCceEEeCCCcHHHHH
Q 021709 1 MAARRVDALLLTDSN-ALLCGILTDKDIATRVIAR---EL------NLEETP------VSKVMTRNPTFVLSDTLAVEAL 64 (308)
Q Consensus 1 m~~~~~~~~~V~~~~-~~~~Giit~~D~~~~~~~~---~~------~~~~~~------v~~im~~~~~~v~~~~~l~~a~ 64 (308)
|.+++++++||+|++ ++++|++|..|+++.+..- .. ...... +.++|.++++++.+++++.+|+
T Consensus 58 m~~~~~~~~pV~d~~~~~lvGilt~~Dl~~~l~~~~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~ 137 (323)
T 3t4n_C 58 LLQNSIVSAPLWDSKTSRFAGLLTTTDFINVIQYYFSNPDKFELVDKLQLDGLKDIERALGVDQLDTASIHPSRPLFEAC 137 (323)
T ss_dssp HHHTTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHCGGGGGGGGGCBHHHHHHHHHHTTC----CCCBCTTSBHHHHH
T ss_pred HHHcCCceEEEEeCCCCeEEEEEEHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHH
Confidence 567899999999975 4999999999999544221 00 001112 2334578899999999999999
Q ss_pred HHhHhCCCcEeeEee-CCe-----EEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhhccCCCCCChhHHHHHHHHH
Q 021709 65 QKMVQGKFRHLPVVE-NGE-----VIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRER 138 (308)
Q Consensus 65 ~~m~~~~~~~~pVvd-~~~-----~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (308)
+.|.+++++++||++ +++ ++|+++..|+++........ ..
T Consensus 138 ~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~----------------------------------~~ 183 (323)
T 3t4n_C 138 LKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRE----------------------------------TH 183 (323)
T ss_dssp HHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGG----------------------------------GG
T ss_pred HHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCc----------------------------------hh
Confidence 999999999999998 453 99999999998764321100 11
Q ss_pred hcCCCcccc---cCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcCC-Ccccccccc
Q 021709 139 MFRPSLSTI---IPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-PADSTLVEK 213 (308)
Q Consensus 139 ~~~~~v~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~-~~~~~~v~~ 213 (308)
....++.++ |. +++.++.+++++.++++.|.+++++++||++ +|+++|++|.+|++ +.+..+. .....++.+
T Consensus 184 ~~~~~v~~~~~~m~--~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~-~~~~~~~~~~~~~~v~~ 260 (323)
T 3t4n_C 184 FLKIPIGDLNIITQ--DNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVL-GLIKGGIYNDLSLSVGE 260 (323)
T ss_dssp GCCSBGGGTTCSBC--TTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHH-HHHHTTHHHHTTSBHHH
T ss_pred hhhCcHHHcCCCCC--CCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHH-HHHhhchhhhccCCHHH
Confidence 234567788 75 7899999999999999999999999999999 79999999999997 4444322 223568999
Q ss_pred cccc------CceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHH
Q 021709 214 VMTP------NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (308)
Q Consensus 214 ~~~~------~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~ 267 (308)
+|.+ ++.++++++++.+++++|.+++.+++||+|++|+++|+||..||+++++.
T Consensus 261 ~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~~l~~ 320 (323)
T 3t4n_C 261 ALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILL 320 (323)
T ss_dssp HGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred HHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHHHHHh
Confidence 9987 78999999999999999999999999999999999999999999998875
No 4
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.97 E-value=3.5e-30 Score=223.80 Aligned_cols=219 Identities=18% Similarity=0.247 Sum_probs=174.1
Q ss_pred CCCCCcCEEEEECCCCcEEEEEehhHHHHHHHHhccCCcccccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEee-
Q 021709 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE- 79 (308)
Q Consensus 1 m~~~~~~~~~V~~~~~~~~Giit~~D~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd- 79 (308)
|.+++++.+||+|++|+++|++|..|+++.+ .+.+++++|.+++.++++++++.+|++.|.+++.+.+||++
T Consensus 27 ~~~~~~~~~pV~d~~~~~~Giv~~~dl~~~~-------~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~ 99 (282)
T 2yzq_A 27 FKKYKVRSFPVVNKEGKLVGIISVKRILVNP-------DEEQLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDS 99 (282)
T ss_dssp -----CCEEEEECTTCCEEEEEESSCC-----------------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HHHcCCCeEEEEcCCCcEEEEEEHHHHHhhh-------ccCCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 5788999999999889999999999998432 35689999998899999999999999999999999999998
Q ss_pred CCeEEEEEeHHHHHH-HHHHHHHHHHHhHHHHHHHhhhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeC
Q 021709 80 NGEVIALLDIAKCLY-DAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTIS 158 (308)
Q Consensus 80 ~~~~vGivs~~dll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~ 158 (308)
+|+++|+++..|+++ ..... ......++.++|. .++.+++
T Consensus 100 ~~~~~Giit~~di~~~~~~~~-------------------------------------~~~~~~~v~~~m~--~~~~~v~ 140 (282)
T 2yzq_A 100 KGKPVGILTVGDIIRRYFAKS-------------------------------------EKYKGVEIEPYYQ--RYVSIVW 140 (282)
T ss_dssp TSCEEEEEEHHHHHHHTTTTC-------------------------------------SGGGGCBSTTTSB--SCCCCEE
T ss_pred CCEEEEEEEHHHHHHHHHhcc-------------------------------------CCcccCcHHHHhC--CCCEEEC
Confidence 589999999999975 31100 0012345788886 7889999
Q ss_pred CCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHH------HHHH------hc-----------------CCCccc
Q 021709 159 PTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL------MRVI------SQ-----------------NLPADS 208 (308)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~------~~~~------~~-----------------~~~~~~ 208 (308)
+++++.++++.|.+++++++||++ +|+++|++|.+|++ +.+. .. ......
T Consensus 141 ~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (282)
T 2yzq_A 141 EGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPN 220 (282)
T ss_dssp TTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGGCGGGCC--------------------------------CC
T ss_pred CCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhhhhhhhhhhccchhhhhhhhhhhcccchHHHHhHhhhhhcc
Confidence 999999999999999999999998 88999999999996 2221 00 011125
Q ss_pred cccccccccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHH
Q 021709 209 TLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 265 (308)
Q Consensus 209 ~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~ 265 (308)
.+++++|.+++.++.+++++.+++++|.+++++++||+|++|+++|+||+.||++++
T Consensus 221 ~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~lvGiit~~Dil~~~ 277 (282)
T 2yzq_A 221 KPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIGLIRDFDLLKVL 277 (282)
T ss_dssp CBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTTEEEEEEEHHHHGGGG
T ss_pred CCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEECCCCCEEEEEeHHHHHHHH
Confidence 689999999999999999999999999999999999999888999999999999754
No 5
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.96 E-value=8.2e-29 Score=220.48 Aligned_cols=232 Identities=16% Similarity=0.170 Sum_probs=184.0
Q ss_pred CCCCCcCEEEEECCC-CcEEEEEehhHHHHHHHHhcc---CCc------cccccc-------ccccCc--eEEeCCCcHH
Q 021709 1 MAARRVDALLLTDSN-ALLCGILTDKDIATRVIAREL---NLE------ETPVSK-------VMTRNP--TFVLSDTLAV 61 (308)
Q Consensus 1 m~~~~~~~~~V~~~~-~~~~Giit~~D~~~~~~~~~~---~~~------~~~v~~-------im~~~~--~~v~~~~~l~ 61 (308)
|.+++++++||++++ ++++|++|.+|+++.+..... ... ..+++. +|.+++ +++.+++++.
T Consensus 50 ~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~ 129 (334)
T 2qrd_G 50 LTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYYQSSSFPEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLM 129 (334)
T ss_dssp HHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHHCSCGGGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHH
T ss_pred HHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHhhccCCccHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHH
Confidence 456789999999976 799999999999954432100 111 233333 356666 9999999999
Q ss_pred HHHHHhHhCCCcEeeEeeC-C-e----EEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhhccCCCCCChhHHHHHH
Q 021709 62 EALQKMVQGKFRHLPVVEN-G-E----VIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETL 135 (308)
Q Consensus 62 ~a~~~m~~~~~~~~pVvd~-~-~----~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (308)
+|++.|.+++++++||+++ + + ++|+++..|+++.......
T Consensus 130 ~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~---------------------------------- 175 (334)
T 2qrd_G 130 DACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCK---------------------------------- 175 (334)
T ss_dssp HHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCG----------------------------------
T ss_pred HHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhcc----------------------------------
Confidence 9999999999999999973 3 4 9999999999865332100
Q ss_pred HHHhcCCCccc---ccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcCC-Cccccc
Q 021709 136 RERMFRPSLST---IIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-PADSTL 210 (308)
Q Consensus 136 ~~~~~~~~v~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~-~~~~~~ 210 (308)
.......++.+ +|. +++.++++++++.++++.|.+++.+++||++ +|+++|++|.+|++ +.+..+. .....+
T Consensus 176 ~~~~~~~~v~~l~~~m~--~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~-~~~~~~~~~~~~~~ 252 (334)
T 2qrd_G 176 ETAMLRVPLNQMTIGTW--SNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVM-HLIQDGDYSNLDLS 252 (334)
T ss_dssp GGGGCCCBGGGSSCSBC--SSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHH-HHHTTSCGGGGGSB
T ss_pred chhhhhCcHHHhCCccc--CCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHH-HHhhccccccccCc
Confidence 00012345677 465 7899999999999999999999999999999 78999999999996 5554432 233568
Q ss_pred ccccccc------CceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHHh
Q 021709 211 VEKVMTP------NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (308)
Q Consensus 211 v~~~~~~------~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~~ 269 (308)
+.++|.+ ++.++++++++.+++++|.+++.+++||+|++|+++|+||..||++++....
T Consensus 253 v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~dil~~~~~~~ 317 (334)
T 2qrd_G 253 VGEALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNYIIYDK 317 (334)
T ss_dssp HHHHHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHHHHHHHHSCC
T ss_pred HHHHHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHHhcc
Confidence 8999984 8899999999999999999999999999998999999999999999776533
No 6
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.96 E-value=4e-28 Score=215.69 Aligned_cols=235 Identities=18% Similarity=0.222 Sum_probs=181.9
Q ss_pred CCCCCcCEEEEECCC-CcEEEEEehhHHHHHHHHhc-------cCCcccc-------cccccccCceEEeCCCcHHHHHH
Q 021709 1 MAARRVDALLLTDSN-ALLCGILTDKDIATRVIARE-------LNLEETP-------VSKVMTRNPTFVLSDTLAVEALQ 65 (308)
Q Consensus 1 m~~~~~~~~~V~~~~-~~~~Giit~~D~~~~~~~~~-------~~~~~~~-------v~~im~~~~~~v~~~~~l~~a~~ 65 (308)
|.+++++++||++.+ ++++|++|.+|+++.+.... ....... ++++|.++++++.+++++.+|++
T Consensus 63 ~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~ 142 (330)
T 2v8q_E 63 LVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVS 142 (330)
T ss_dssp HHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHTTTCCCGGGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHH
T ss_pred HHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccccchhHHhhccHHHHHHHHhhcccCCceEeCCCCCHHHHHH
Confidence 456789999999977 78999999999996443211 0111222 34678899999999999999999
Q ss_pred HhHhCCCcEeeEee--CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhhccCCCCCChhHHHHHHHHHhcCCC
Q 021709 66 KMVQGKFRHLPVVE--NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPS 143 (308)
Q Consensus 66 ~m~~~~~~~~pVvd--~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (308)
.|.+++++++||++ +|+++|+++..|+++...... +.... .. +...+
T Consensus 143 ~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~---------------------~~~~~-~~---------~~~~~ 191 (330)
T 2v8q_E 143 SLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFI---------------------TEFPK-PE---------FMSKS 191 (330)
T ss_dssp HHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHS---------------------CSSSC-CG---------GGGSB
T ss_pred HHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHh---------------------hccCc-hh---------hhcCC
Confidence 99999999999998 589999999999986532110 00000 00 01112
Q ss_pred cccc--cCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcC-CCccccccccccc---
Q 021709 144 LSTI--IPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQN-LPADSTLVEKVMT--- 216 (308)
Q Consensus 144 v~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~-~~~~~~~v~~~~~--- 216 (308)
+.++ |. ..++.++++++++.++++.|.+++.+++||++ +|+++|++|.+|++ +..... ......++.++|.
T Consensus 192 v~~~~v~~-~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~-~~~~~~~~~~~~~~v~~~~~~~~ 269 (330)
T 2v8q_E 192 LEELQIGT-YANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVI-NLAAEKTYNNLDVSVTKALQHRS 269 (330)
T ss_dssp HHHHTCSB-CSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTG-GGGGSSCCCCCSSBHHHHGGGCC
T ss_pred HHHhcccC-cCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHH-HHHhccccccccCcHHHHHhccc
Confidence 3332 21 15688999999999999999999999999999 89999999999996 444322 2222457888884
Q ss_pred ---cCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHH
Q 021709 217 ---PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (308)
Q Consensus 217 ---~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~ 268 (308)
+++.++++++++.+++++|.+++.+++||+|++|+++|+||..||++++...
T Consensus 270 ~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~~~~~ 324 (330)
T 2v8q_E 270 HYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQALVLT 324 (330)
T ss_dssp SCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHSS
T ss_pred cccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHHHHhh
Confidence 7899999999999999999999999999999889999999999999977643
No 7
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.93 E-value=6.5e-25 Score=192.01 Aligned_cols=200 Identities=20% Similarity=0.265 Sum_probs=167.3
Q ss_pred ccCCcccccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEeeCCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHh
Q 021709 35 ELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (308)
Q Consensus 35 ~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~ 114 (308)
..+....+++++|.++++++++++++.+|++.|.+++++++||++ ++++|++|..|+++........
T Consensus 14 ~~~~~~~~V~dim~~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d-~~l~GivT~~Di~~~~~~~~~~------------ 80 (296)
T 3ddj_A 14 NLYFQGMNIETLMIKNPPILSKEDRLGSAFKKINEGGIGRIIVAN-EKIEGLLTTRDLLSTVESYCKD------------ 80 (296)
T ss_dssp CCTTCCSSGGGTCEESCCEECTTSBHHHHHHHTTGGGCCEEEEES-SSEEEEEEHHHHHGGGTTCC--------------
T ss_pred hhhhcccCHHHhccCCCcEECCCccHHHHHHHHHHCCCceEEEEC-CeEEEEEeHHHHHHHhcccccc------------
Confidence 445667899999999999999999999999999999999999999 9999999999998653210000
Q ss_pred hhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHH
Q 021709 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSK 193 (308)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~ 193 (308)
......+. .....++.++|. +++.++.+++++.++++.|.+++++++||++ +++++|++|.+
T Consensus 81 --------------~~~~~~~~-~~~~~~v~~im~--~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~ 143 (296)
T 3ddj_A 81 --------------SCSQGDLY-HISTTPIIDYMT--PNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTER 143 (296)
T ss_dssp ---------------CCHHHHH-HHHTSBGGGTSE--ESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHH
T ss_pred --------------cccchhhH-HHhcccHHHhcc--CCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHH
Confidence 00011111 122456899998 6889999999999999999999999999998 88999999999
Q ss_pred HHHHHHHhcCCCccccccccccccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHH
Q 021709 194 DILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (308)
Q Consensus 194 dl~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~ 267 (308)
|++ +.+..... ..++.++|.+++.++++++++.++++.|.+++.+++||+|++|+++|+||..||++++..
T Consensus 144 dl~-~~~~~~~~--~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 214 (296)
T 3ddj_A 144 EFL-LLYKDLDE--IFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAK 214 (296)
T ss_dssp HHG-GGGGGSCC--CCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred HHH-Hhhhcccc--cccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 996 44433332 458999999999999999999999999999999999999999999999999999998764
No 8
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.92 E-value=1.1e-23 Score=182.49 Aligned_cols=195 Identities=19% Similarity=0.296 Sum_probs=158.1
Q ss_pred ccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEee--CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhhcc
Q 021709 44 SKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE--NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHW 121 (308)
Q Consensus 44 ~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd--~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (308)
+.+|.++++++++++++.+|++.|.+++++++||++ +|+++|+++..|+++......... .++..
T Consensus 7 ~~i~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~------------~~~~~- 73 (280)
T 3kh5_A 7 KIAQNKKIVTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYN------------LIREK- 73 (280)
T ss_dssp GTSCCSCCCCBCTTSBHHHHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGH------------HHHTT-
T ss_pred HHhcCCCcEEECCCCcHHHHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhh------------hhhhc-
Confidence 456778999999999999999999999999999998 589999999999987532100000 00000
Q ss_pred CCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHH
Q 021709 122 GTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVI 200 (308)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~ 200 (308)
...... .....+++++|. +++.++++++++.++++.|.+++++++||++ +|+++|++|.+|++ +.+
T Consensus 74 -----~~~~~~-----~~~~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~-~~~ 140 (280)
T 3kh5_A 74 -----HERNFL-----AAINEPVREIME--ENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVI-RAL 140 (280)
T ss_dssp -----STTCHH-----HHTTSBGGGTSB--CSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHH-HHH
T ss_pred -----cccchh-----HHhhhhHHHhcC--CCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHH-HHH
Confidence 000000 012457899998 6899999999999999999999999999998 89999999999996 555
Q ss_pred hcCCCccccccccccccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHH
Q 021709 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (308)
Q Consensus 201 ~~~~~~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~ 266 (308)
...... ..++.++|.+++.++++++++.++++.|.+++.+++||+ ++|+++|+||..||++++.
T Consensus 141 ~~~~~~-~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~~ 204 (280)
T 3kh5_A 141 LDKIDE-NEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLLG 204 (280)
T ss_dssp GGGSCT-TCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHHT
T ss_pred hhcCCC-CCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHHh
Confidence 444332 348999999999999999999999999999999999999 5899999999999998763
No 9
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.91 E-value=5.3e-24 Score=184.75 Aligned_cols=176 Identities=27% Similarity=0.388 Sum_probs=138.8
Q ss_pred ccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhhc
Q 021709 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120 (308)
Q Consensus 42 ~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (308)
+++++|.++++++++++++.+|+++|.+++++++||++ +|+++|+++..|++...
T Consensus 2 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~~~~~~Giv~~~dl~~~~------------------------ 57 (282)
T 2yzq_A 2 RVKTIMTQNPVTITLPATRNYALELFKKYKVRSFPVVNKEGKLVGIISVKRILVNP------------------------ 57 (282)
T ss_dssp BHHHHSEESCCCEESSCC------------CCEEEEECTTCCEEEEEESSCC----------------------------
T ss_pred chHHhccCCCeEECCCCcHHHHHHHHHHcCCCeEEEEcCCCcEEEEEEHHHHHhhh------------------------
Confidence 57899999999999999999999999999999999998 79999999999987431
Q ss_pred cCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHH
Q 021709 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRV 199 (308)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~ 199 (308)
...++.++|. +++.++++++++.++++.|.+++.+.+||++ +|+++|++|..|++++.
T Consensus 58 -------------------~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~ 116 (282)
T 2yzq_A 58 -------------------DEEQLAMLVK--RDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRY 116 (282)
T ss_dssp -------------------------CCCB--SCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHT
T ss_pred -------------------ccCCHHHHcC--CCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHH
Confidence 1234778887 5689999999999999999999999999999 78999999999996414
Q ss_pred HhcCCCccccccccccccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHH
Q 021709 200 ISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHIT 262 (308)
Q Consensus 200 ~~~~~~~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~ 262 (308)
+.........+++++|.+++.++++++++.++++.|.+++.+++||+|++|+++|+||..|++
T Consensus 117 ~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~ 179 (282)
T 2yzq_A 117 FAKSEKYKGVEIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLL 179 (282)
T ss_dssp TTTCSGGGGCBSTTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGG
T ss_pred HhccCCcccCcHHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHh
Confidence 443222235678999999999999999999999999999999999999899999999999999
No 10
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.89 E-value=8e-22 Score=174.45 Aligned_cols=206 Identities=16% Similarity=0.225 Sum_probs=155.9
Q ss_pred ccccccccccc--CceEEeCCCcHHHHHHHhHhCCCcEeeEeeC--CeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHh
Q 021709 39 EETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (308)
Q Consensus 39 ~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~--~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~ 114 (308)
...++.++|.+ ++++++.++++.+|++.|.+++++++||+++ ++++|+++..|++........... ..
T Consensus 28 ~~~~~~d~m~~~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~~~l~~~~~~~~--------~~ 99 (323)
T 3t4n_C 28 NSKTSYDVLPVSYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFINVIQYYFSNPD--------KF 99 (323)
T ss_dssp HHSBHHHHSCSEEEEEEEETTSBHHHHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHCGG--------GG
T ss_pred HhCchHhhCCCCCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHHHHHHHHHcCcc--------hh
Confidence 56689999974 6789999999999999999999999999984 599999999999876443211000 00
Q ss_pred hhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCE-----EEE
Q 021709 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENK-----PRG 188 (308)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~-----~~G 188 (308)
..++. .. ...+.+.+. ..++|. ++++++++++++.++++.|.+++++++||++ ++. ++|
T Consensus 100 ~~l~~-------~~---~~~v~~i~~---~~~~~~--~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~G 164 (323)
T 3t4n_C 100 ELVDK-------LQ---LDGLKDIER---ALGVDQ--LDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVS 164 (323)
T ss_dssp GGGGG-------CB---HHHHHHHHH---HTTC------CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEE
T ss_pred HHHHH-------HH---HHHHHHHHH---HhCCCC--CCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEE
Confidence 00000 00 011111111 234444 6789999999999999999999999999998 554 999
Q ss_pred EeeHHHHHHHHHhcC--CCccccccccc---cccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHH
Q 021709 189 ILTSKDILMRVISQN--LPADSTLVEKV---MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH 263 (308)
Q Consensus 189 ivt~~dl~~~~~~~~--~~~~~~~v~~~---~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~ 263 (308)
++|.+|+++.+.... ......++.++ |.+++.++.+++++.++++.|.+++.+++||+|++|+++|+||..|+++
T Consensus 165 ivt~~di~~~l~~~~~~~~~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~ 244 (323)
T 3t4n_C 165 VLTQYRILKFVALNCRETHFLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLG 244 (323)
T ss_dssp EEEHHHHHHHHHHHCGGGGGCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHH
T ss_pred EecHHHHHHHHHhcCCchhhhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHH
Confidence 999999974443221 11224578888 8889999999999999999999999999999999999999999999998
Q ss_pred HHHH
Q 021709 264 AAVA 267 (308)
Q Consensus 264 ~~~~ 267 (308)
++..
T Consensus 245 ~~~~ 248 (323)
T 3t4n_C 245 LIKG 248 (323)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 7653
No 11
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.88 E-value=2.6e-21 Score=171.75 Aligned_cols=203 Identities=21% Similarity=0.194 Sum_probs=154.9
Q ss_pred cccccccc--ccCceEEeCCCcHHHHHHHhHhCCCcEeeEee-C-CeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhh
Q 021709 40 ETPVSKVM--TRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 115 (308)
Q Consensus 40 ~~~v~~im--~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~-~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~ 115 (308)
+.+++++| .++++++++++++.+|++.|.+++++++||++ + ++++|+++..|++...........
T Consensus 34 ~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~----------- 102 (330)
T 2v8q_E 34 SHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSAL----------- 102 (330)
T ss_dssp HSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHT-----------
T ss_pred cCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccc-----------
Confidence 45899999 78899999999999999999999999999998 4 689999999999876443211100
Q ss_pred hhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee--CCEEEEEeeHH
Q 021709 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV--ENKPRGILTSK 193 (308)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~--~~~~~Givt~~ 193 (308)
.... ...... ...... ++.++|. +++.++++++++.++++.|.+++.+++||++ +|+++|++|.+
T Consensus 103 ---~~~~--~l~~~~-~~~~~~-----~~~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~ 169 (330)
T 2v8q_E 103 ---VQIY--ELEEHK-IETWRE-----VYLQDSF--KPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHK 169 (330)
T ss_dssp ---TTCC--CGGGCB-HHHHHH-----HHSSSSC--CCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHH
T ss_pred ---cchh--HHhhcc-HHHHHH-----HHhhccc--CCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHH
Confidence 0000 000000 111111 2456676 7899999999999999999999999999998 68999999999
Q ss_pred HHHHHHHhcCCC-----ccccccccc--cc-cCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHH
Q 021709 194 DILMRVISQNLP-----ADSTLVEKV--MT-PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 265 (308)
Q Consensus 194 dl~~~~~~~~~~-----~~~~~v~~~--~~-~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~ 265 (308)
|+++.+...... ....+++++ |. +++.++.+++++.++++.|.+++.+++||+|++|+++|+||..||+++.
T Consensus 170 dl~~~~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~~~~ 249 (330)
T 2v8q_E 170 RILKFLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLA 249 (330)
T ss_dssp HHHHHHHHHSCSSSCCGGGGSBHHHHTCSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTGGGG
T ss_pred HHHHHHHHHhhccCchhhhcCCHHHhcccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHHHHH
Confidence 997444322111 012344444 44 7889999999999999999999999999999899999999999999755
Q ss_pred H
Q 021709 266 V 266 (308)
Q Consensus 266 ~ 266 (308)
.
T Consensus 250 ~ 250 (330)
T 2v8q_E 250 A 250 (330)
T ss_dssp G
T ss_pred h
Confidence 3
No 12
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.86 E-value=2e-20 Score=166.16 Aligned_cols=207 Identities=13% Similarity=0.147 Sum_probs=152.9
Q ss_pred cccccccccc--CceEEeCCCcHHHHHHHhHhCCCcEeeEeeC--CeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhh
Q 021709 40 ETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 115 (308)
Q Consensus 40 ~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~--~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~ 115 (308)
+.+++++|.+ +++++++++++.+|++.|.+++++++||+++ ++++|+++..|++........... .. .
T Consensus 21 ~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~~~~~-~~-------~ 92 (334)
T 2qrd_G 21 SRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYYQSSS-FP-------E 92 (334)
T ss_dssp HSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHHCS-CG-------G
T ss_pred cCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHhhccC-Cc-------c
Confidence 4689999964 5789999999999999999999999999984 699999999999865432211000 00 0
Q ss_pred hhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-C-CE----EEEE
Q 021709 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NK----PRGI 189 (308)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~-~~----~~Gi 189 (308)
... . ..........+.+ .++|.+..+++++++++++.++++.|.+++.+++||++ + +. ++|+
T Consensus 93 ~~~-~--~~~~~~~~i~~~l---------~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Gi 160 (334)
T 2qrd_G 93 AIA-E--IDKFRLLGLREVE---------RKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSV 160 (334)
T ss_dssp GGG-G--GGSCBHHHHHHHH---------HHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEE
T ss_pred HHH-H--HhhhchhhHHHHH---------HhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEE
Confidence 000 0 0000001111111 23444212338999999999999999999999999998 4 34 9999
Q ss_pred eeHHHHHHHHHhcCC--Ccccccccc---ccccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHH
Q 021709 190 LTSKDILMRVISQNL--PADSTLVEK---VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264 (308)
Q Consensus 190 vt~~dl~~~~~~~~~--~~~~~~v~~---~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~ 264 (308)
+|.+|+++.+..... .....++++ +|.+++.++++++++.++++.|.+++.+++||+|++|+++|+||..||+++
T Consensus 161 vt~~dl~~~~~~~~~~~~~~~~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~ 240 (334)
T 2qrd_G 161 LTQYRILKFISMNCKETAMLRVPLNQMTIGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHL 240 (334)
T ss_dssp EEHHHHHHHHHHHCGGGGGCCCBGGGSSCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHH
T ss_pred eeHHHHHHHHHhhccchhhhhCcHHHhCCcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHH
Confidence 999999744432211 112356777 488899999999999999999999999999999988999999999999986
Q ss_pred HH
Q 021709 265 AV 266 (308)
Q Consensus 265 ~~ 266 (308)
+.
T Consensus 241 ~~ 242 (334)
T 2qrd_G 241 IQ 242 (334)
T ss_dssp HT
T ss_pred hh
Confidence 54
No 13
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.85 E-value=1.4e-20 Score=148.87 Aligned_cols=128 Identities=20% Similarity=0.254 Sum_probs=112.0
Q ss_pred CCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcCCCc---ccccccccccc
Q 021709 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPA---DSTLVEKVMTP 217 (308)
Q Consensus 142 ~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~~---~~~~v~~~~~~ 217 (308)
..++++|.|+.++.++++++++.+|+++|.+++++++||++ +++++|++|.+|+++.+....... ...++.++|.+
T Consensus 15 ~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~im~~ 94 (156)
T 3k6e_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMTKT 94 (156)
T ss_dssp TTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGTCBC
T ss_pred ccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccccccccccCHHHhhcC
Confidence 45889999888999999999999999999999999999998 799999999999975555443321 25689999999
Q ss_pred CceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHHhcC
Q 021709 218 NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGN 271 (308)
Q Consensus 218 ~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~~~~ 271 (308)
++.++++++++.++++.|.+++ .+||||++|+++|+||+.||++++......
T Consensus 95 ~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~~~~~~~~ 146 (156)
T 3k6e_A 95 DVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALLHD 146 (156)
T ss_dssp SCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHHHHHHSCC
T ss_pred CceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHHHHHHhcc
Confidence 9999999999999999998776 499999999999999999999988776654
No 14
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.82 E-value=1.2e-19 Score=142.14 Aligned_cols=125 Identities=18% Similarity=0.204 Sum_probs=111.0
Q ss_pred hcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-C-CEEEEEeeHHHHHHHHHhcCCCccccccccccc
Q 021709 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMT 216 (308)
Q Consensus 139 ~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~ 216 (308)
+...+++++|.+..++.++++++++.++++.|.+++++++||++ + |+++|++|.+|++..+.... ..++.++|
T Consensus 20 l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~----~~~v~~~m- 94 (148)
T 3lv9_A 20 FEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN----KIELEEIL- 94 (148)
T ss_dssp GGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS----CCCGGGTC-
T ss_pred cCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC----CccHHHhc-
Confidence 45677999998544899999999999999999999999999999 5 89999999999964443332 45889999
Q ss_pred cCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHH
Q 021709 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (308)
Q Consensus 217 ~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~ 268 (308)
+++.++++++++.++++.|.+++.+.+||+|++|+++|+||..||++++++.
T Consensus 95 ~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~~ 146 (148)
T 3lv9_A 95 RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVGE 146 (148)
T ss_dssp BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHHHT
T ss_pred CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCc
Confidence 8999999999999999999999999999999999999999999999988763
No 15
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.82 E-value=6.9e-21 Score=152.92 Aligned_cols=126 Identities=25% Similarity=0.261 Sum_probs=108.4
Q ss_pred HhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcC-------------
Q 021709 138 RMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQN------------- 203 (308)
Q Consensus 138 ~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~------------- 203 (308)
.+...+++++|. ++++++.+++++.+|++.|.+++++++||+| +|+++|+||.+|+++......
T Consensus 14 ~l~~~~V~diM~--~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~ 91 (170)
T 4esy_A 14 AIRQVPIRDILT--SPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEILSRAIP 91 (170)
T ss_dssp HHHTSBGGGGCC--SCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSC
T ss_pred HHcCCCHHHhcC--CCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhhhhhhccc
Confidence 345678999998 7899999999999999999999999999999 899999999999963221100
Q ss_pred --------CCccccccccccccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHH
Q 021709 204 --------LPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (308)
Q Consensus 204 --------~~~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~ 266 (308)
......+++++|++++.++++++++.+++++|.+++++++||+| +|+++|+||..||+++++
T Consensus 92 ~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd-~g~lvGivt~~Dil~~l~ 161 (170)
T 4esy_A 92 APEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ-DGVPVGIVTRRDLLKLLL 161 (170)
T ss_dssp HHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHTTTSC
T ss_pred hhhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 00113578999999999999999999999999999999999998 699999999999998664
No 16
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.82 E-value=5.7e-20 Score=140.91 Aligned_cols=123 Identities=17% Similarity=0.195 Sum_probs=107.7
Q ss_pred CcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee--CCEEEEEeeHHHHHHHHHhcCCCccccccccccccCce
Q 021709 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV--ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220 (308)
Q Consensus 143 ~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~--~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~~~~ 220 (308)
+++++|.+..++.++++++++.++++.|.+++++++||++ +++++|++|.+|++ +....+......++.++| +++.
T Consensus 3 ~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~-~~~~~~~~~~~~~v~~~m-~~~~ 80 (130)
T 3hf7_A 3 SVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAY-RLMTEKKEFTKEIMLRAA-DEIY 80 (130)
T ss_dssp BHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHH-HHHTSSSCCCHHHHHHHS-BCCC
T ss_pred CHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHH-HHHhccCccchhhHHHhc-cCCe
Confidence 4678886545799999999999999999999999999996 47999999999996 555554433345788999 6889
Q ss_pred eecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHH
Q 021709 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (308)
Q Consensus 221 ~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~ 267 (308)
++++++++.++++.|.+++.+.+||+|++|+++|+||..||++++++
T Consensus 81 ~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~g 127 (130)
T 3hf7_A 81 FVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVG 127 (130)
T ss_dssp EEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHHC
T ss_pred EeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999998764
No 17
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.81 E-value=1.1e-19 Score=139.18 Aligned_cols=124 Identities=15% Similarity=0.183 Sum_probs=107.3
Q ss_pred cCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-C-CEEEEEeeHHHHHHHHHhcCCCcccccccccccc
Q 021709 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTP 217 (308)
Q Consensus 140 ~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~ 217 (308)
...+++++|.+...+.++++++++.++++.|.+++++++||++ + ++++|++|.+|++ +....+.. ..++.++|.
T Consensus 4 ~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~-~~~~~~~~--~~~v~~~m~- 79 (130)
T 3i8n_A 4 QDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELF-KMQQSGSG--QKQLGAVMR- 79 (130)
T ss_dssp ---CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHH-HHHHTTTT--TSBHHHHSE-
T ss_pred CcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHH-HHHhcCCC--cCCHHHHhc-
Confidence 4556899998656678999999999999999999999999998 5 8999999999996 54444332 468899994
Q ss_pred CceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHH
Q 021709 218 NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (308)
Q Consensus 218 ~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~ 267 (308)
++.++++++++.++++.|.+++.+.+||+|++|+++|+||..||++++++
T Consensus 80 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 80 PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHcC
Confidence 68999999999999999999999999999999999999999999998763
No 18
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.81 E-value=9.1e-19 Score=134.44 Aligned_cols=126 Identities=28% Similarity=0.412 Sum_probs=111.7
Q ss_pred CCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEeeCCEEEEEeeHHHHHHHHHhcCCCccccccccccccCce
Q 021709 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220 (308)
Q Consensus 141 ~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~~~~ 220 (308)
..+++++|. +++.++++++++.++++.|.+++.+++||+++|+++|++|.+|++ +.+..+... ..++.++|.+++.
T Consensus 3 ~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~-~~~~~~~~~-~~~v~~~~~~~~~ 78 (133)
T 2ef7_A 3 EEIVKEYMK--TQVISVTKDAKLNDIAKVMTEKNIGSVIVVDGNKPVGIITERDIV-KAIGKGKSL-ETKAEEFMTASLI 78 (133)
T ss_dssp CCBGGGTSB--CSCCEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH-HHHHTTCCT-TCBGGGTSEECCC
T ss_pred cccHHHhcc--CCCEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEcHHHHH-HHHhcCCCc-ccCHHHHcCCCCE
Confidence 456889997 679999999999999999999999999999988999999999996 555544333 4689999999999
Q ss_pred eecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHHhc
Q 021709 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVG 270 (308)
Q Consensus 221 ~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~~~ 270 (308)
++++++++.++++.|.+++.+++||+|++|+++|+||..||++++.....
T Consensus 79 ~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~~~ 128 (133)
T 2ef7_A 79 TIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDMFE 128 (133)
T ss_dssp CEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHC-
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHHH
Confidence 99999999999999999999999999989999999999999998776544
No 19
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.81 E-value=2.4e-19 Score=144.23 Aligned_cols=127 Identities=14% Similarity=0.125 Sum_probs=110.3
Q ss_pred hcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-C-CEEEEEeeHHHHHHHHHhcCCCccccccccccc
Q 021709 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMT 216 (308)
Q Consensus 139 ~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~ 216 (308)
+...+++++|.+..++.++++++++.++++.|.+++++++||++ + ++++|++|.+|++ +....+. ..++.++|
T Consensus 39 l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~-~~~~~~~---~~~v~~im- 113 (172)
T 3lhh_A 39 LDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLL-SESIAGE---RLELVDLV- 113 (172)
T ss_dssp ----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHH-HHHHTTC---CCCGGGGC-
T ss_pred cCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHH-HHHhhcC---cccHHHHh-
Confidence 34567899998656789999999999999999999999999999 5 8999999999996 4444332 45899999
Q ss_pred cCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHHhc
Q 021709 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVG 270 (308)
Q Consensus 217 ~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~~~ 270 (308)
+++.++++++++.++++.|.+++.+.+||+|++|+++|+||..||+++++....
T Consensus 114 ~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~~~~ 167 (172)
T 3lhh_A 114 KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTGEFF 167 (172)
T ss_dssp BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHTTCC
T ss_pred cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhCCCc
Confidence 899999999999999999999999999999999999999999999998876443
No 20
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.80 E-value=7.2e-20 Score=146.96 Aligned_cols=143 Identities=23% Similarity=0.307 Sum_probs=113.3
Q ss_pred CcccccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhh
Q 021709 38 LEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (308)
Q Consensus 38 ~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~ 116 (308)
..+.+|+++|.++++++++++++.+|++.|.+++++++||+| +|+++|++|..|+++.............
T Consensus 15 l~~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~~--------- 85 (170)
T 4esy_A 15 IRQVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEI--------- 85 (170)
T ss_dssp HHTSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHHH---------
T ss_pred HcCCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhhh---------
Confidence 346799999999999999999999999999999999999998 6899999999999865332111100000
Q ss_pred hhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEeeCCEEEEEeeHHHHH
Q 021709 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDIL 196 (308)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dl~ 196 (308)
.....+..............++.++|. ++++++++++++.+++++|.+++++++||+++|+++|+||.+|++
T Consensus 86 ------~~~~~~~~~~~~~~~~~~~~~v~~im~--~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~g~lvGivt~~Dil 157 (170)
T 4esy_A 86 ------LSRAIPAPEVEHLFETGRKLTASAVMT--QPVVTAAPEDSVGSIADQMRRHGIHRIPVVQDGVPVGIVTRRDLL 157 (170)
T ss_dssp ------HTTTSCHHHHHHHHHHHTTCBHHHHCB--CCSCCBCTTSBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHT
T ss_pred ------hhhccchhhHHhhhccccccchhhhcc--cCcccCCcchhHHHHHHHHHHcCCcEEEEEECCEEEEEEEHHHHH
Confidence 000111222333444456678899998 789999999999999999999999999999999999999999997
Q ss_pred H
Q 021709 197 M 197 (308)
Q Consensus 197 ~ 197 (308)
+
T Consensus 158 ~ 158 (170)
T 4esy_A 158 K 158 (170)
T ss_dssp T
T ss_pred H
Confidence 3
No 21
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.80 E-value=1.4e-18 Score=137.71 Aligned_cols=134 Identities=20% Similarity=0.228 Sum_probs=117.3
Q ss_pred HHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcCCCcccccccc
Q 021709 135 LRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEK 213 (308)
Q Consensus 135 ~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~ 213 (308)
+...+...++.++|. + ++++.+++++.+|++.|.+++++++||++ +|+++|+||.+|++ +.+.........++.+
T Consensus 10 l~~~l~~~~v~~im~--~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~v~~ 85 (159)
T 3fv6_A 10 LADKLKKLQVKDFQS--I-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLL-RASIGQQELTSVPVHI 85 (159)
T ss_dssp HHHHHTTCBGGGSCB--C-CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHH-HHHTSCSCTTTCBGGG
T ss_pred HHHHHhhCCHHHHcC--C-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHH-HHhhccCcccCcCHHH
Confidence 455567778999997 4 56999999999999999999999999999 89999999999996 5443333334678999
Q ss_pred cccc--CceeecCCCCHHHHHHHHHhCCCCEEEEECCCC---cEEEEEEhhHHHHHHHHHhcCC
Q 021709 214 VMTP--NPECATIDTPIVDALHIMHDGKFLHLPVVDRDG---DVVDVVDVIHITHAAVATVGNT 272 (308)
Q Consensus 214 ~~~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~---~~iGiit~~di~~~~~~~~~~~ 272 (308)
+|.+ ++.++++++++.+++++|.+++.+++||+|++| +++|+||..||++++.......
T Consensus 86 ~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~~~~~~ 149 (159)
T 3fv6_A 86 IMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVSLSENE 149 (159)
T ss_dssp TSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHHHHTTC
T ss_pred HHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHHHhhcc
Confidence 9998 899999999999999999999999999999888 9999999999999988777664
No 22
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.80 E-value=7.9e-20 Score=141.20 Aligned_cols=124 Identities=20% Similarity=0.240 Sum_probs=105.5
Q ss_pred CcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-C-CEEEEEeeHHHHHHHHHhcCCCccccccccccccCce
Q 021709 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220 (308)
Q Consensus 143 ~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~~~~ 220 (308)
+++++|.+..++.++++++++.++++.|.+++++++||++ + ++++|++|.+|++ +.+..... ...+++++|.+ +.
T Consensus 4 ~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~-~~~~~~~~-~~~~v~~~m~~-~~ 80 (136)
T 3lfr_A 4 QVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLL-PLILKADG-DSDDVKKLLRP-AT 80 (136)
T ss_dssp BHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGG-GGGGSSSG-GGCCGGGTCBC-CC
T ss_pred ChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHH-HHHHhccC-CCcCHHHHcCC-Ce
Confidence 4678887556789999999999999999999999999999 5 7999999999996 44432222 35689999965 99
Q ss_pred eecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHHh
Q 021709 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (308)
Q Consensus 221 ~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~~ 269 (308)
++.+++++.+++++|.+++.+.+||+|++|+++|+||..||++++.+..
T Consensus 81 ~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~~~~ 129 (136)
T 3lfr_A 81 FVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIVGDI 129 (136)
T ss_dssp EEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC----
T ss_pred EECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999998776543
No 23
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.80 E-value=3.8e-19 Score=135.81 Aligned_cols=123 Identities=13% Similarity=0.089 Sum_probs=108.8
Q ss_pred CCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEeeCCEEEEEeeHHHHHHHHHhcCCCccccccccccccCce
Q 021709 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220 (308)
Q Consensus 141 ~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~~~~ 220 (308)
..+++++|. +++.++++++++.++++.|.+++.+++||+++|+++|++|.+|++ +....+... ..++.++|.+++.
T Consensus 4 s~~v~~~m~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~-~~~~~~~~~-~~~v~~~m~~~~~ 79 (128)
T 3gby_A 4 SVTFSYLAE--TDYPVFTLGGSTADAARRLAASGCACAPVLDGERYLGMVHLSRLL-EGRKGWPTV-KEKLGEELLETVR 79 (128)
T ss_dssp TCBGGGGCB--CCSCCEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH-TTCSSSCCT-TCBCCGGGCBCCC
T ss_pred ceEHHHhhc--CCcceECCCCCHHHHHHHHHHCCCcEEEEEECCEEEEEEEHHHHH-HHHhhCCcc-cCcHHHHccCCCc
Confidence 456889998 779999999999999999999999999999999999999999995 444333221 3579999999999
Q ss_pred eecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHH
Q 021709 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (308)
Q Consensus 221 ~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~ 267 (308)
++++++++.++++.|.+++.+++||+|++|+++|+||..||++++..
T Consensus 80 ~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 80 SYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp CBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHHT
T ss_pred EECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999987643
No 24
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.79 E-value=9.9e-19 Score=132.12 Aligned_cols=117 Identities=25% Similarity=0.289 Sum_probs=105.3
Q ss_pred CcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcCCCccccccccccccCcee
Q 021709 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPEC 221 (308)
Q Consensus 143 ~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~~~~~ 221 (308)
+++++|. +++.++++++++.++++.|.+++.+.+||++ +|+++|++|.+|++ +.+.... .++.++|.+++.+
T Consensus 2 ~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~-~~~~~~~----~~v~~~~~~~~~~ 74 (122)
T 3kpb_A 2 LVKDILS--KPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIA-KALAQNK----KTIEEIMTRNVIT 74 (122)
T ss_dssp BHHHHCC--SCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHH-HHHHTTC----CBGGGTSBSSCCC
T ss_pred chHHhhC--CCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHH-HHHHhcc----cCHHHHhcCCCeE
Confidence 4667887 6799999999999999999999999999999 89999999999996 5444332 2789999999999
Q ss_pred ecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHH
Q 021709 222 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (308)
Q Consensus 222 v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~ 266 (308)
+++++++.+++++|.+++.+++||+|++|+++|+||..||++++.
T Consensus 75 v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~ 119 (122)
T 3kpb_A 75 AHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFG 119 (122)
T ss_dssp EETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC
T ss_pred ECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhh
Confidence 999999999999999999999999998899999999999998754
No 25
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.79 E-value=3.9e-19 Score=140.09 Aligned_cols=126 Identities=14% Similarity=0.138 Sum_probs=108.9
Q ss_pred cCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEe-e--CCEEEEEeeHHHHHHHHHhcCCCccccccccccc
Q 021709 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVT-V--ENKPRGILTSKDILMRVISQNLPADSTLVEKVMT 216 (308)
Q Consensus 140 ~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~-~--~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~ 216 (308)
...+++++|.++.++.++++++++.++++.|.+++++++||+ + +|+++|+||.+|+++.+... . ..++.++|
T Consensus 18 ~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~-~---~~~v~~~m- 92 (153)
T 3oco_A 18 NDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARID-D---KAKISTIM- 92 (153)
T ss_dssp HHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHH-T---TSBGGGTC-
T ss_pred CCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcC-C---CCcHHHHh-
Confidence 345688999743489999999999999999999999999999 5 48999999999996444333 2 45899999
Q ss_pred cCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHHhc
Q 021709 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVG 270 (308)
Q Consensus 217 ~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~~~ 270 (308)
+++.++++++++.++++.|.+++.+.+||+|++|+++|+||..||++++++...
T Consensus 93 ~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~~~~ 146 (153)
T 3oco_A 93 RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFGNLR 146 (153)
T ss_dssp BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC---
T ss_pred CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhccCC
Confidence 899999999999999999999999999999999999999999999998876443
No 26
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.79 E-value=8.7e-19 Score=134.95 Aligned_cols=124 Identities=27% Similarity=0.464 Sum_probs=108.2
Q ss_pred CcccccCCC-CceeEeCCCCcHHHHHHHHHHcCCcEEEEeeCCEEEEEeeHHHHHHHHHhcCCCccccccccccccCcee
Q 021709 143 SLSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPEC 221 (308)
Q Consensus 143 ~v~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~~~~~ 221 (308)
+++++|.+. +++.++++++++.++++.|.+++.+++||+++|+++|++|.+|+++.+...+......++.++|.+++.+
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~ 86 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMKDEKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQVAY 86 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCSCCC
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCCCeE
Confidence 456677522 4789999999999999999999999999999899999999999964455554444467899999999999
Q ss_pred ecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHH
Q 021709 222 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (308)
Q Consensus 222 v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~ 267 (308)
+++++++.+++++|.+++.+++||+| +|+++|+||..||++++..
T Consensus 87 v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 87 VDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp BCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred ECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHHh
Confidence 99999999999999999999999999 7999999999999987653
No 27
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.79 E-value=2.1e-19 Score=137.10 Aligned_cols=121 Identities=19% Similarity=0.271 Sum_probs=103.8
Q ss_pred CcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-C-CEEEEEeeHHHHHHHHHhcCCCccccccccccccCce
Q 021709 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220 (308)
Q Consensus 143 ~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~~~~ 220 (308)
+++++|.+..++.++++++++.++++.|.+++++++||++ + |+++|++|.+|++ +.+.... ...+++++|. ++.
T Consensus 4 ~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~-~~~~~~~--~~~~v~~~m~-~~~ 79 (127)
T 3nqr_A 4 RVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLL-PFMRSDA--EAFSMDKVLR-TAV 79 (127)
T ss_dssp BHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGG-GGGSTTC--CCCCHHHHCB-CCC
T ss_pred CHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHH-HHHhccC--CCCCHHHHcC-CCe
Confidence 4678887434589999999999999999999999999999 5 7999999999996 4433222 2568899995 488
Q ss_pred eecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHH
Q 021709 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (308)
Q Consensus 221 ~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~ 267 (308)
++++++++.+++++|.+++.+.+||+|++|+++|+||..||++++++
T Consensus 80 ~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 80 VVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp EEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC--
T ss_pred EECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999987653
No 28
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.79 E-value=1.1e-18 Score=134.81 Aligned_cols=126 Identities=25% Similarity=0.460 Sum_probs=111.5
Q ss_pred cCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcCCCccccccccccccC
Q 021709 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 218 (308)
Q Consensus 140 ~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~~ 218 (308)
...+++++|. +++.++++++++.++++.|.+++++++||++ +|+++|++|.+|++++++..+. ....++.++|.++
T Consensus 5 ~~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-~~~~~v~~~m~~~ 81 (138)
T 2yzi_A 5 MKAPIKVYMT--KKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGL-PYDIPVERIMTRN 81 (138)
T ss_dssp TTSBGGGTCB--CCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCC-CTTSBGGGTCBCS
T ss_pred hhhhHHHHhc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCC-cccCCHHHHhhCC
Confidence 4456889997 7899999999999999999999999999999 8999999999999645554443 2356899999999
Q ss_pred ceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHHh
Q 021709 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (308)
Q Consensus 219 ~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~~ 269 (308)
+.++++++++.+++++|.+++.+++ |+|++|+++|+||..||++++....
T Consensus 82 ~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~~~ 131 (138)
T 2yzi_A 82 LITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRRRL 131 (138)
T ss_dssp CCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHCCS
T ss_pred CeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHHHH
Confidence 9999999999999999999999999 9998899999999999999776543
No 29
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.79 E-value=5.8e-19 Score=135.00 Aligned_cols=122 Identities=15% Similarity=0.179 Sum_probs=105.9
Q ss_pred CCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-C-CEEEEEeeHHHHHHHHHhcCCCccccccccccccC
Q 021709 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 218 (308)
Q Consensus 141 ~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~~ 218 (308)
..+++++|.+..++.++++++++.++++.|.+++++++||++ + ++++|++|.+|++ +.... ...+++++|. +
T Consensus 4 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~-~~~~~----~~~~v~~~m~-~ 77 (129)
T 3jtf_A 4 ERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLL-RYMLE----PALDIRSLVR-P 77 (129)
T ss_dssp CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGG-GGGTC----TTSCGGGGCB-C
T ss_pred CCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHH-hHhcc----CCcCHHHHhC-C
Confidence 345788887656789999999999999999999999999998 4 8999999999996 43321 2457899996 5
Q ss_pred ceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHH
Q 021709 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (308)
Q Consensus 219 ~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~ 268 (308)
+.++.+++++.+++++|.+++.+.+||+|++|+++|+||..||++++++.
T Consensus 78 ~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~ge 127 (129)
T 3jtf_A 78 AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIVGD 127 (129)
T ss_dssp CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHHHT
T ss_pred CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCC
Confidence 88999999999999999999999999999889999999999999988763
No 30
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.79 E-value=1.6e-18 Score=131.54 Aligned_cols=119 Identities=22% Similarity=0.238 Sum_probs=106.8
Q ss_pred cccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEeeCCEEEEEeeHHHHHHHHHhcCCCccccccccccccCceeec
Q 021709 144 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECAT 223 (308)
Q Consensus 144 v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~~~~~v~ 223 (308)
++++|. +++.++++++++.++++.|.+++.+++||+++|+++|++|.+|++ +.+..+......++.++|.+++.+++
T Consensus 3 v~~~m~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~G~it~~dl~-~~~~~~~~~~~~~v~~~m~~~~~~v~ 79 (125)
T 1pbj_A 3 VEDVMV--TDVDTIDITASLEDVLRNYVENAKGSSVVVKEGVRVGIVTTWDVL-EAIAEGDDLAEVKVWEVMERDLVTIS 79 (125)
T ss_dssp HHHHCB--CSCCEEETTCBHHHHHHHHHHHCCCEEEEEETTEEEEEEEHHHHH-HHHHHTCCTTTSBHHHHCBCGGGEEC
T ss_pred HHHhcC--CCceEECCCCcHHHHHHHHHHcCCCEEEEEeCCeeEEEEeHHHHH-HHHhcCCcccccCHHHHcCCCCeEEC
Confidence 567776 689999999999999999999999999999999999999999996 55555444346689999999999999
Q ss_pred CCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHH
Q 021709 224 IDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (308)
Q Consensus 224 ~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~ 266 (308)
+++++.++++.|.+++.+++||+|+ |+++|+||..||++++.
T Consensus 80 ~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~ 121 (125)
T 1pbj_A 80 PRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKM 121 (125)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC
T ss_pred CCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 9999999999999999999999997 99999999999998764
No 31
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.79 E-value=1.3e-18 Score=137.49 Aligned_cols=132 Identities=19% Similarity=0.243 Sum_probs=112.2
Q ss_pred hcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcCCC---ccccccccc
Q 021709 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLP---ADSTLVEKV 214 (308)
Q Consensus 139 ~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~---~~~~~v~~~ 214 (308)
+...+++++|.+..++.++++++++.++++.|.+++++++||++ +|+++|++|.+|++..+...... ....++.++
T Consensus 12 l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~~~ 91 (156)
T 3ctu_A 12 FLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHM 91 (156)
T ss_dssp HHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGG
T ss_pred HHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccccccccccCcHHHh
Confidence 44456899998667899999999999999999999999999998 89999999999997444432221 114689999
Q ss_pred cccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHHhcCC
Q 021709 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNT 272 (308)
Q Consensus 215 ~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~~~~~ 272 (308)
|.+++.++++++++.++++.|.+++ ++||+|++|+++|+||..||++++.......
T Consensus 92 m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~~~~~~ 147 (156)
T 3ctu_A 92 TKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALLHDF 147 (156)
T ss_dssp CBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHHHSCC-
T ss_pred ccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHHHHHhh
Confidence 9999999999999999999999886 6999999999999999999999988776653
No 32
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.79 E-value=2.7e-18 Score=133.27 Aligned_cols=121 Identities=21% Similarity=0.352 Sum_probs=107.5
Q ss_pred CCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CC--EEEEEeeHHHHHHHHHhcCCCccccccccccccC
Q 021709 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-EN--KPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 218 (308)
Q Consensus 142 ~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~--~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~~ 218 (308)
.+++++|. +++.++++++++.++++.|.+++.+++||++ ++ +++|++|.+|++ +.+..+... ..++.++|.++
T Consensus 5 ~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~-~~~~~~~~~-~~~v~~~m~~~ 80 (141)
T 2rih_A 5 IRTSELLK--RPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDIL-RAVAQRLDL-DGPAMPIANSP 80 (141)
T ss_dssp CBGGGGCC--SCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHH-HHHHTTCCT-TSBSGGGCBCC
T ss_pred eEHHHHhc--CCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHH-HHHhcCCCC-CCCHHHHcCCC
Confidence 45888997 7899999999999999999999999999999 66 899999999996 555444333 56899999999
Q ss_pred ceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHH
Q 021709 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (308)
Q Consensus 219 ~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~ 267 (308)
+.+++++ ++.+++++|.+++.+++||+|++|+++|+||..||+++...
T Consensus 81 ~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 128 (141)
T 2rih_A 81 ITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFERAI 128 (141)
T ss_dssp CEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCHHH
T ss_pred CeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHHHH
Confidence 9999999 99999999999999999999989999999999999976553
No 33
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.78 E-value=9e-19 Score=137.37 Aligned_cols=130 Identities=18% Similarity=0.166 Sum_probs=110.7
Q ss_pred hcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcCC-----Cccccccc
Q 021709 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-----PADSTLVE 212 (308)
Q Consensus 139 ~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~-----~~~~~~v~ 212 (308)
+...+++++|.+..++.++++++++.++++.|.+++++++||++ +|+++|++|.+|++ +.+.... .....++.
T Consensus 12 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~~~~~~v~ 90 (150)
T 3lqn_A 12 FQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMIL-DGILGLERIEFERLEEMKVE 90 (150)
T ss_dssp HHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHH-HHTBCSSSBCGGGGGGCBGG
T ss_pred hhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHH-HHHHhhcccchhHHhcCCHH
Confidence 44566889997444699999999999999999999999999999 89999999999996 5443211 12356899
Q ss_pred cccccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHHhcC
Q 021709 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGN 271 (308)
Q Consensus 213 ~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~~~~ 271 (308)
++|.+++.++++++++.+++++|.+++. +||+|++|+++|+||..||++++......
T Consensus 91 ~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~~~~~ 147 (150)
T 3lqn_A 91 QVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNKKVRQ 147 (150)
T ss_dssp GTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC--
T ss_pred HHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHHHhHh
Confidence 9999999999999999999999999986 99999999999999999999988876554
No 34
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.78 E-value=4.6e-19 Score=141.47 Aligned_cols=129 Identities=22% Similarity=0.341 Sum_probs=111.6
Q ss_pred hcCCCcccccCCC-CceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcCCCccccccccccc
Q 021709 139 MFRPSLSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMT 216 (308)
Q Consensus 139 ~~~~~v~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~ 216 (308)
+...+++++|.+. .++.++++++++.++++.|.+++.+++||++ +|+++|+||.+|+++.+..........++.++|.
T Consensus 21 l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~ 100 (165)
T 3fhm_A 21 GMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAASLQQSVSVAMT 100 (165)
T ss_dssp SSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHGGGGGTSBGGGTSB
T ss_pred hhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcCCccccCCHHHHhc
Confidence 4456678888731 3699999999999999999999999999999 8899999999999755544432334678999999
Q ss_pred cCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHH
Q 021709 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (308)
Q Consensus 217 ~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~ 268 (308)
+++.++.+++++.+++++|.+++.+++||+|+ |+++|+||..||++++...
T Consensus 101 ~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~~ 151 (165)
T 3fhm_A 101 KNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIGE 151 (165)
T ss_dssp SSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTCC
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHH
Confidence 99999999999999999999999999999998 9999999999999876543
No 35
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.78 E-value=4e-18 Score=144.88 Aligned_cols=217 Identities=18% Similarity=0.220 Sum_probs=138.9
Q ss_pred ccccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhh
Q 021709 40 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (308)
Q Consensus 40 ~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (308)
..+++++|.++++++++++++.+|+++|.+++++++||+| +|+++|+++..|+++.......... ..........+.
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~~~~~~~--~~~~~~~~~~v~ 83 (245)
T 3l2b_A 6 KLKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMDIWDSNI--LAKSATSLDNIL 83 (245)
T ss_dssp CCBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHCCCCTTH--HHHTTCCHHHHH
T ss_pred cCcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHhhhhhh--hhhccCCHHHHH
Confidence 5689999999999999999999999999999999999998 5999999999999877542110000 000000000000
Q ss_pred hccCCCCCChh----HHHHHH-HHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEeeCC---------
Q 021709 119 KHWGTSISGPN----TFIETL-RERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVEN--------- 184 (308)
Q Consensus 119 ~~~~~~~~~~~----~~~~~~-~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~~--------- 184 (308)
+.......... ...... ...+....+.+.+.+ ..+..+.. -.++...+.+.+.+.++++++.
T Consensus 84 ~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~-~~ivIvgd---r~~~~~~~i~~~~~~liit~~~~~~~~v~~~ 159 (245)
T 3l2b_A 84 DTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISE-GDIAIAGD---RAEIQAELIELKVSLLIVTGGHTPSKEIIEL 159 (245)
T ss_dssp HHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCT-TCEEEECS---CHHHHHHHHHTTCSEEEECTTCCCCHHHHHH
T ss_pred HHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCC-CCEEEECC---CHHHHHHHHHcCCCEEEECCCCCCCHHHHHH
Confidence 00000000000 000000 000001112233332 34444432 3677888888999998887521
Q ss_pred ----EEEEEeeHHHHHHHHHhcCCCccccccccccc-cCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhh
Q 021709 185 ----KPRGILTSKDILMRVISQNLPADSTLVEKVMT-PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVI 259 (308)
Q Consensus 185 ----~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~-~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~ 259 (308)
.+..+.|..|.. ....... ...+++++|+ +++.++++++++.+++++|.+++++++||+|++|+++|+||..
T Consensus 160 a~~~~~~~i~t~~d~~-~~~~~~~--~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~ 236 (245)
T 3l2b_A 160 AKKNNITVITTPHDSF-TASRLIV--QSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARF 236 (245)
T ss_dssp HHHHTCEEEECSSCHH-HHHHHGG--GGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC
T ss_pred HHHcCCeEEEeCCChH-HHHHHHh--cCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHH
Confidence 245677887874 3322211 2468999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 021709 260 HITHAA 265 (308)
Q Consensus 260 di~~~~ 265 (308)
|++++.
T Consensus 237 dll~~~ 242 (245)
T 3l2b_A 237 HLISTH 242 (245)
T ss_dssp ------
T ss_pred Hhhchh
Confidence 999753
No 36
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.78 E-value=7.8e-19 Score=138.88 Aligned_cols=128 Identities=23% Similarity=0.374 Sum_probs=110.5
Q ss_pred CcccccCCC----CceeEeCCCCcHHHHHHHHHHcCCcEEEEeeCCEEEEEeeHHHHHHHHHhcCCCccccccccccccC
Q 021709 143 SLSTIIPEK----SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 218 (308)
Q Consensus 143 ~v~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~~ 218 (308)
+++++|.+. +++.++++++++.+|++.|.+++++++||.++|+++|++|.+|+++.+..........++.++|.++
T Consensus 8 ~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~ 87 (157)
T 4fry_A 8 TVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVDGDDIAGIVTERDYARKVVLQERSSKATRVEEIMTAK 87 (157)
T ss_dssp BHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEESSSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHHSBSS
T ss_pred HHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEeeCCEEEEEEEHHHHHHHHHhccCCccccCHHHHcCCC
Confidence 466777633 4579999999999999999999999999976899999999999975544444443467899999999
Q ss_pred ceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHHhcC
Q 021709 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGN 271 (308)
Q Consensus 219 ~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~~~~ 271 (308)
+.++++++++.+++++|.+++.+++||+| +|+++|+||..||++++......
T Consensus 88 ~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~~~~ 139 (157)
T 4fry_A 88 VRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQQF 139 (157)
T ss_dssp CCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCCC
T ss_pred CcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999 79999999999999988765544
No 37
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.77 E-value=3.3e-18 Score=132.06 Aligned_cols=125 Identities=27% Similarity=0.361 Sum_probs=109.0
Q ss_pred hcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHH-HHHHHhcCCCccccccccccc
Q 021709 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI-LMRVISQNLPADSTLVEKVMT 216 (308)
Q Consensus 139 ~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl-~~~~~~~~~~~~~~~v~~~~~ 216 (308)
+...+++++|. +++.++++++++.++++.|.+++.+++||++ +|+++|++|.+|+ + +.+..... ...++.++|.
T Consensus 5 l~~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~-~~~~~~~~-~~~~v~~~m~ 80 (138)
T 2p9m_A 5 LKNIKVKDVMT--KNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGY-NLIRDKYT-LETTIGDVMT 80 (138)
T ss_dssp CTTCBGGGTSB--CSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHH-HHTTTCCC-SSCBHHHHSC
T ss_pred cccCCHHHhhc--CCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHH-HHHhhccc-CCcCHHHHhC
Confidence 44567899997 6899999999999999999999999999999 8999999999999 6 44333222 2568999999
Q ss_pred cCceeecCCCCHHHHHHHHHhCC-----CCEEEEECCCCcEEEEEEhhHHHHHHHH
Q 021709 217 PNPECATIDTPIVDALHIMHDGK-----FLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (308)
Q Consensus 217 ~~~~~v~~~~~l~~~~~~~~~~~-----~~~l~Vvd~~~~~iGiit~~di~~~~~~ 267 (308)
+++.++++++++.++++.|.+++ .+.+||+|++|+++|+||..||++++..
T Consensus 81 ~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 81 KDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp SSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred CCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 99999999999999999999999 9999999989999999999999987654
No 38
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.77 E-value=2.1e-18 Score=138.80 Aligned_cols=127 Identities=15% Similarity=0.160 Sum_probs=109.6
Q ss_pred hcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-C-CEEEEEeeHHHHHHHHHhcCCCccccccccccc
Q 021709 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMT 216 (308)
Q Consensus 139 ~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~ 216 (308)
+...+++++|.+.++++++++++++.++++.|.+++++++||++ + ++++|+||.+|++...... . ..++. + .
T Consensus 33 l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~-~---~~~v~-~-~ 106 (173)
T 3ocm_A 33 LAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITE-G---RVRRN-R-L 106 (173)
T ss_dssp HTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHH-S---SCCGG-G-S
T ss_pred cCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcC-C---cchhH-h-c
Confidence 56678999997556799999999999999999999999999998 5 7999999999997443332 2 34667 4 4
Q ss_pred cCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHHhcC
Q 021709 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGN 271 (308)
Q Consensus 217 ~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~~~~ 271 (308)
+++.++++++++.+++++|.+++.+.+||+|++|+++|+||..||+++++.....
T Consensus 107 ~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~i~d 161 (173)
T 3ocm_A 107 RDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFPD 161 (173)
T ss_dssp BCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCCCCC
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCcCCC
Confidence 7889999999999999999999999999999999999999999999988864443
No 39
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.77 E-value=2.2e-18 Score=135.14 Aligned_cols=121 Identities=20% Similarity=0.231 Sum_probs=108.2
Q ss_pred CCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcCCCccccccccccccCc
Q 021709 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 219 (308)
Q Consensus 141 ~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~~~ 219 (308)
..++.++|.+..++.++++++++.++++.|.+++++++||++ +|+++|+||.+|++ +.+..+......++.++|.+++
T Consensus 27 ~~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~v~~~m~~~~ 105 (149)
T 3k2v_A 27 LLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLR-RVFDTGVDMRDASIADVMTRGG 105 (149)
T ss_dssp TSBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHH-HHHCSSSCCTTCBHHHHSEESC
T ss_pred ccCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHH-HHHhcCCCcccCcHHHHcCCCC
Confidence 357899998322899999999999999999999999999999 89999999999996 6666555544678999999999
Q ss_pred eeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHH
Q 021709 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH 263 (308)
Q Consensus 220 ~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~ 263 (308)
.++++++++.+++++|.+++.+.+||+|++ +++|+||..||++
T Consensus 106 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 106 IRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp CEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred eEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 999999999999999999999999999965 9999999999975
No 40
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.77 E-value=5.3e-18 Score=131.79 Aligned_cols=124 Identities=15% Similarity=0.172 Sum_probs=104.3
Q ss_pred CCCccc---ccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcCC-Ccccccccccc
Q 021709 141 RPSLST---IIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-PADSTLVEKVM 215 (308)
Q Consensus 141 ~~~v~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~-~~~~~~v~~~~ 215 (308)
..++.+ +|. +++.++++++++.++++.|.+++.+++||++ +|+++|++|.+|++ +.+..+. .....++.++|
T Consensus 7 ~~~v~~~~~~~~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~~v~~~m 83 (144)
T 2nyc_A 7 KIPIGDLNIITQ--DNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVL-GLIKGGIYNDLSLSVGEAL 83 (144)
T ss_dssp GSBGGGSSCCBC--SSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHH-HHHHTC----CCSBHHHHH
T ss_pred hcchhhcCCCCC--CCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHH-HHhcccccccCCccHHHHH
Confidence 345666 665 6899999999999999999999999999999 89999999999996 4443321 22356889988
Q ss_pred cc------CceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHH
Q 021709 216 TP------NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (308)
Q Consensus 216 ~~------~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~ 267 (308)
.+ ++.++++++++.++++.|.+++.+++||+|++|+++|+||..||++++..
T Consensus 84 ~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 84 MRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp HHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred hcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 76 68899999999999999999999999999988999999999999997754
No 41
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.76 E-value=7.3e-19 Score=134.99 Aligned_cols=121 Identities=17% Similarity=0.320 Sum_probs=107.3
Q ss_pred CCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcCCCccccccccccccCce
Q 021709 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220 (308)
Q Consensus 142 ~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~~~~ 220 (308)
.+++++|. +++.++++++++.++++.|.+++.+++||++ +++++|++|.+|++++++..+......++.++|.+++.
T Consensus 8 ~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~ 85 (133)
T 1y5h_A 8 TTARDIMN--AGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGELARDSIY 85 (133)
T ss_dssp CCHHHHSE--ETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHTTCCC
T ss_pred cCHHHHhc--CCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCCCccccCHHHHhcCCCE
Confidence 45778887 6789999999999999999999999999997 89999999999996345555444345689999999999
Q ss_pred eecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHH
Q 021709 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 265 (308)
Q Consensus 221 ~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~ 265 (308)
++++++++.+++++|.+++.+++||+|+ |+++|+||..||++++
T Consensus 86 ~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l 129 (133)
T 1y5h_A 86 YVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHL 129 (133)
T ss_dssp CEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTC
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 9999999999999999999999999997 9999999999999754
No 42
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.76 E-value=1.8e-18 Score=135.60 Aligned_cols=128 Identities=27% Similarity=0.393 Sum_probs=107.1
Q ss_pred CCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcC-------------CCcc
Q 021709 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQN-------------LPAD 207 (308)
Q Consensus 142 ~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~-------------~~~~ 207 (308)
.+++++|.+..++.++++++++.++++.|.+++++++||++ +++++|++|..|++ .+.... ....
T Consensus 5 ~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~-~~~~~~~~~~~~~~~~~~~~~~~ 83 (152)
T 4gqw_A 5 YTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLL-ALDSGDSTWKTFNAVQKLLSKTN 83 (152)
T ss_dssp SBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHT-TCC----CCHHHHHHHTC-----
T ss_pred EEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHH-HhhcccCcccchHHHHHHHHHhc
Confidence 45889998433799999999999999999999999999999 78999999999995 321100 1122
Q ss_pred ccccccccccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHHhc
Q 021709 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVG 270 (308)
Q Consensus 208 ~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~~~ 270 (308)
..++.++|.+++.++++++++.+++++|.+++.+++||+|++|+++|+||..||++++.....
T Consensus 84 ~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~~~~ 146 (152)
T 4gqw_A 84 GKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKR 146 (152)
T ss_dssp CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC---
T ss_pred cccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHhccc
Confidence 468999999999999999999999999999999999999999999999999999998775443
No 43
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.76 E-value=6.8e-18 Score=133.99 Aligned_cols=127 Identities=19% Similarity=0.187 Sum_probs=108.9
Q ss_pred CCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhc-------CCCccccccc
Q 021709 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQ-------NLPADSTLVE 212 (308)
Q Consensus 141 ~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~-------~~~~~~~~v~ 212 (308)
..+++++|. +++.++++++++.+|++.|.+++++.+||++ +|+++|+||.+|++..+... .......++.
T Consensus 4 ~~~v~dim~--~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~ 81 (160)
T 2o16_A 4 MIKVEDMMT--RHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLF 81 (160)
T ss_dssp CCBGGGTSE--ESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCBHH
T ss_pred cCcHHHHhc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccCHH
Confidence 346889997 6899999999999999999999999999999 89999999999996444321 1112356899
Q ss_pred cccccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHHhc
Q 021709 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVG 270 (308)
Q Consensus 213 ~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~~~ 270 (308)
++|.+++.++++++++.++++.|.+++.+++||+|+ |+++|+||..||++++.....
T Consensus 82 ~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~~~~~ 138 (160)
T 2o16_A 82 EVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAINLLE 138 (160)
T ss_dssp HHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHHHHHH
T ss_pred HHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999997 999999999999998776443
No 44
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.76 E-value=1.2e-17 Score=131.99 Aligned_cols=122 Identities=21% Similarity=0.310 Sum_probs=106.1
Q ss_pred CcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcE-EEEeeCCEEEEEeeHHHHHHHHHhc--------------CCCcc
Q 021709 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSS-AVVTVENKPRGILTSKDILMRVISQ--------------NLPAD 207 (308)
Q Consensus 143 ~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~V~~~~~~~Givt~~dl~~~~~~~--------------~~~~~ 207 (308)
+++++|. +++.++++++++.+|++.|.+++.+. +||+++++++|++|..|++...... .....
T Consensus 17 ~v~~im~--~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (157)
T 1o50_A 17 DVCKLIS--LKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDNKLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSMKRLI 94 (157)
T ss_dssp HHTTSSC--CCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETTEEEEEEEHHHHHHHHHHHHHCCCC-------CCCCCS
T ss_pred cHhhccc--CCCceECCCCCHHHHHHHHHhCCCCccEEEEECCEEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHHHHHc
Confidence 4788897 78999999999999999999999999 9999944999999999996443211 11223
Q ss_pred ccccccccccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHH
Q 021709 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (308)
Q Consensus 208 ~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~ 267 (308)
..++.++|.+ +.++++++++.+++++|.+++.+++||+|++|+++|+||..||++++..
T Consensus 95 ~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~ 153 (157)
T 1o50_A 95 AKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWK 153 (157)
T ss_dssp SCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred CCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 5689999999 9999999999999999999999999999988999999999999987764
No 45
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.76 E-value=2.1e-18 Score=139.27 Aligned_cols=130 Identities=22% Similarity=0.333 Sum_probs=109.9
Q ss_pred CcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcC------------------
Q 021709 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQN------------------ 203 (308)
Q Consensus 143 ~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~------------------ 203 (308)
+++++|.+..++.++++++++.++++.|.+++++++||++ +++++|+||.+|+++.....+
T Consensus 5 ~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (180)
T 3sl7_A 5 TVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKT 84 (180)
T ss_dssp BHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------CCCS
T ss_pred eHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchhhh
Confidence 4678887323799999999999999999999999999999 899999999999962111000
Q ss_pred --------CCccccccccccccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHHhcCC
Q 021709 204 --------LPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNT 272 (308)
Q Consensus 204 --------~~~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~~~~~ 272 (308)
......++.++|.+++.++++++++.+++++|.+++.+++||+|++|+++|+||..||++++.......
T Consensus 85 ~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~~~~~~ 161 (180)
T 3sl7_A 85 FNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKRNA 161 (180)
T ss_dssp HHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHhhhh
Confidence 011245899999999999999999999999999999999999999999999999999999988766654
No 46
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.75 E-value=2.2e-17 Score=136.41 Aligned_cols=124 Identities=15% Similarity=0.232 Sum_probs=110.6
Q ss_pred hcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHc---CCcEEEEee-CCEEEEEeeHHHHHHHHHhcCCCccccccccc
Q 021709 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL---RLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKV 214 (308)
Q Consensus 139 ~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~ 214 (308)
+...+++++|. +++++++++.++.++++.|.+. +++++||++ +++++|+||.+|++ . .....+++++
T Consensus 51 ~~~~~v~~iM~--~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll-~------~~~~~~v~~i 121 (205)
T 3kxr_A 51 YSENEIGRYTD--HQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIF-K------HEPHEPLISL 121 (205)
T ss_dssp SCTTCGGGGCB--CCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHT-T------SCTTSBGGGG
T ss_pred CCcchHHhhcc--CceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHH-h------CCCcchHHHH
Confidence 44567999998 7899999999999999999986 789999999 89999999999996 1 1235689999
Q ss_pred cccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHHhcC
Q 021709 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGN 271 (308)
Q Consensus 215 ~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~~~~ 271 (308)
|.+++.++++++++.++++.|.+++.+.+||||++|+++|+||..||++.+......
T Consensus 122 m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e~~e 178 (205)
T 3kxr_A 122 LSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREHYEA 178 (205)
T ss_dssp CCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHHHC-
T ss_pred hcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988765544
No 47
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.75 E-value=1.2e-17 Score=131.88 Aligned_cols=131 Identities=15% Similarity=0.191 Sum_probs=111.0
Q ss_pred hcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcCC-----Cccccccc
Q 021709 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-----PADSTLVE 212 (308)
Q Consensus 139 ~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~-----~~~~~~v~ 212 (308)
+...++.++|.+..++.+++++.++.++++.|.+++++++||++ +|+++|++|.+|++ +.+.... .....++.
T Consensus 8 l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~~~~~~v~ 86 (157)
T 2emq_A 8 FMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMM-DAILGLERIEFERLETMKVE 86 (157)
T ss_dssp --CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHH-HHSBCSSSBCGGGGGTCBGG
T ss_pred HhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHH-HHHhcccccchHHhcCCcHH
Confidence 45567899997323899999999999999999999999999999 89999999999996 5443311 12356899
Q ss_pred cccccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHHhcCC
Q 021709 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNT 272 (308)
Q Consensus 213 ~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~~~~~ 272 (308)
++|.+++.++++++++.+++++|.+++. +||+|++|+++|+||..||++++.......
T Consensus 87 ~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~~~~~~ 144 (157)
T 2emq_A 87 EVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNKQLHRP 144 (157)
T ss_dssp GTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHHTTCCC
T ss_pred HHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999987 999998899999999999999887765543
No 48
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.75 E-value=3.3e-17 Score=128.20 Aligned_cols=136 Identities=18% Similarity=0.333 Sum_probs=107.1
Q ss_pred EEEehhHHHHHHHHhccCCccccccccccc--CceEEeCCCcHHHHHHHhHhCCCcEeeEeeC--CeEEEEEeHHHHHHH
Q 021709 20 GILTDKDIATRVIARELNLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYD 95 (308)
Q Consensus 20 Giit~~D~~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~--~~~vGivs~~dll~~ 95 (308)
|.++..+- .++.....+...+++++|.+ +++++++++++.+|++.|.+++++++||+++ |+++|+++..|+++.
T Consensus 4 g~l~~~e~--~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~ 81 (148)
T 3lv9_A 4 GLIDESEQ--RLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQ 81 (148)
T ss_dssp ----------------CGGGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHH
T ss_pred CccCHHHH--HHHHHHhccCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHH
Confidence 45554432 44455556778899999998 9999999999999999999999999999984 899999999999865
Q ss_pred HHHHHHHHHHhHHHHHHHhhhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCC
Q 021709 96 AIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRL 175 (308)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 175 (308)
.... ...++.++| .++.++++++++.++++.|.+++.
T Consensus 82 ~~~~----------------------------------------~~~~v~~~m---~~~~~v~~~~~l~~~~~~m~~~~~ 118 (148)
T 3lv9_A 82 KINE----------------------------------------NKIELEEIL---RDIIYISENLTIDKALERIRKEKL 118 (148)
T ss_dssp HHHH----------------------------------------SCCCGGGTC---BCCEEEETTSBHHHHHHHHHHHTC
T ss_pred HhcC----------------------------------------CCccHHHhc---CCCeEECCCCCHHHHHHHHHhcCC
Confidence 2210 144588888 368999999999999999999999
Q ss_pred cEEEEee-CCEEEEEeeHHHHHHHHH
Q 021709 176 SSAVVTV-ENKPRGILTSKDILMRVI 200 (308)
Q Consensus 176 ~~~~V~~-~~~~~Givt~~dl~~~~~ 200 (308)
+.+||++ +|+++|++|..|+++.+.
T Consensus 119 ~~l~Vvd~~g~~~Giit~~dil~~l~ 144 (148)
T 3lv9_A 119 QLAIVVDEYGGTSGVVTIEDILEEIV 144 (148)
T ss_dssp SEEEEECTTSSEEEEEEHHHHHHHHH
T ss_pred eEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 9999999 799999999999985554
No 49
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.75 E-value=1.5e-17 Score=130.79 Aligned_cols=114 Identities=17% Similarity=0.223 Sum_probs=100.3
Q ss_pred CceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcC-CCccccccccccc------cCceeec
Q 021709 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQN-LPADSTLVEKVMT------PNPECAT 223 (308)
Q Consensus 152 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~-~~~~~~~v~~~~~------~~~~~v~ 223 (308)
+++.++.+++++.++++.|.+++.+.+||++ +|+++|++|.+|++ +..... ......++.++|. +++.++.
T Consensus 29 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~-~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~ 107 (152)
T 2uv4_A 29 ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVI-NLAAEKTYNNLDVSVTKALQHRSHYFEGVLKCY 107 (152)
T ss_dssp SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHH-HHHHCSSCCCTTSBGGGGGGTCCHHHHTCSEEC
T ss_pred CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHH-HHhcchhhhhhcchHHHHHhhhhcccCCCeEEC
Confidence 4688899999999999999999999999999 89999999999996 444332 2223567899996 7899999
Q ss_pred CCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHH
Q 021709 224 IDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (308)
Q Consensus 224 ~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~ 266 (308)
+++++.+++++|.+++.+++||+|++|+++|+||..||++++.
T Consensus 108 ~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l~ 150 (152)
T 2uv4_A 108 LHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALV 150 (152)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHC
T ss_pred CCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 9999999999999999999999998899999999999998764
No 50
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.75 E-value=8.2e-18 Score=136.65 Aligned_cols=125 Identities=24% Similarity=0.267 Sum_probs=109.3
Q ss_pred CCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcCCCccccccccccccCc
Q 021709 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 219 (308)
Q Consensus 141 ~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~~~ 219 (308)
..+++++|. +++.++++++++.+|+++|.+++++++||++ +|+++|++|.+|++..+..........++.++|.+++
T Consensus 8 ~~~v~~im~--~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~~ 85 (184)
T 1pvm_A 8 FMRVEKIMN--SNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKPI 85 (184)
T ss_dssp CCBGGGTSB--TTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSSC
T ss_pred ccCHHHhcC--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCCC
Confidence 356889997 7899999999999999999999999999998 7999999999999643332222334568999999999
Q ss_pred eeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHH
Q 021709 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (308)
Q Consensus 220 ~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~ 267 (308)
.++++++++.+++++|.+++.+.+||+|++|+++|+||..||++++..
T Consensus 86 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 86 PKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp CEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSCH
T ss_pred cEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHh
Confidence 999999999999999999999999999988999999999999975543
No 51
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.75 E-value=3.2e-18 Score=135.31 Aligned_cols=119 Identities=15% Similarity=0.216 Sum_probs=105.1
Q ss_pred hcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-C-CEEEEEeeHHHHHHHHHhcCCCccccccccccc
Q 021709 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMT 216 (308)
Q Consensus 139 ~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~ 216 (308)
+...+++++|.+..++.++++++++.++++.|.+++++++||++ + ++++|++|.+|++ +.+..+ ...++.++|.
T Consensus 35 l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~-~~~~~~---~~~~v~~im~ 110 (156)
T 3oi8_A 35 FSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLL-KYMFNP---EQFHLKSILR 110 (156)
T ss_dssp HTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGG-GGSSCG---GGCCHHHHCB
T ss_pred cCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHH-HHHHcC---CcccHHHHcC
Confidence 55678999998544799999999999999999999999999998 5 5999999999996 443222 3568999996
Q ss_pred cCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHH
Q 021709 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHIT 262 (308)
Q Consensus 217 ~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~ 262 (308)
+ +.++++++++.++++.|.+++.+.+||+|++|+++|+||..||+
T Consensus 111 ~-~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 111 P-AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp C-CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred C-CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 5 89999999999999999999999999999999999999999986
No 52
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.74 E-value=1.5e-17 Score=131.71 Aligned_cols=130 Identities=14% Similarity=0.177 Sum_probs=109.6
Q ss_pred hcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcCCC-----ccccccc
Q 021709 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLP-----ADSTLVE 212 (308)
Q Consensus 139 ~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~-----~~~~~v~ 212 (308)
+...++.++|.+..++.++++++++.++++.|.+++++++||++ +|+++|++|..|++ ..+..... ....++.
T Consensus 11 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~-~~~~~~~~~~~~~~~~~~v~ 89 (159)
T 1yav_A 11 LLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIM-NSIFGLERIEFEKLDQITVE 89 (159)
T ss_dssp CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHH-HHHBCSSSBCGGGTTTSBHH
T ss_pred HhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHH-HHhhhhcccchhhhccCCHH
Confidence 34567888997223799999999999999999999999999999 78999999999996 55433211 2356899
Q ss_pred cccccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHHhcC
Q 021709 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGN 271 (308)
Q Consensus 213 ~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~~~~ 271 (308)
++|.+++.++.+++++.+++++|.+++. +||+|++|+++|+||..||++++......
T Consensus 90 ~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~~~~~ 146 (159)
T 1yav_A 90 EVMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNKHIRS 146 (159)
T ss_dssp HHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC--
T ss_pred HhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHHHHHh
Confidence 9999999999999999999999999876 99999899999999999999988765544
No 53
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.73 E-value=2.5e-17 Score=133.57 Aligned_cols=133 Identities=11% Similarity=0.164 Sum_probs=110.7
Q ss_pred HhcCCCcccccCCCCc--eeEe--CCCCcHHHHHHHHHHcCCcEEEEe--e-CCEEEEEeeHHHHHHHHHhcC-------
Q 021709 138 RMFRPSLSTIIPEKSK--VVTI--SPTDTVLMATKKMLELRLSSAVVT--V-ENKPRGILTSKDILMRVISQN------- 203 (308)
Q Consensus 138 ~~~~~~v~~~~~~~~~--~~~v--~~~~~~~~~~~~~~~~~~~~~~V~--~-~~~~~Givt~~dl~~~~~~~~------- 203 (308)
.+...+++++|.+..+ +.++ .+++++.+|++.|.+++++.+||+ + +|+++|+||..|++..+....
T Consensus 7 ~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~ 86 (185)
T 2j9l_A 7 FAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVV 86 (185)
T ss_dssp --CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCC
T ss_pred hhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCcc
Confidence 3456778999984221 7788 999999999999999999999999 6 889999999999974443321
Q ss_pred ----------------CCccccccccccccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHH
Q 021709 204 ----------------LPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (308)
Q Consensus 204 ----------------~~~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~ 267 (308)
......++.++|.+++.++++++++.+++++|.+++.+++||+| +|+++|+||..||++++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~ 165 (185)
T 2j9l_A 87 STSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQ 165 (185)
T ss_dssp TTCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred ccceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 11235689999999999999999999999999999999999999 8999999999999998876
Q ss_pred HhcC
Q 021709 268 TVGN 271 (308)
Q Consensus 268 ~~~~ 271 (308)
....
T Consensus 166 ~~~~ 169 (185)
T 2j9l_A 166 MANQ 169 (185)
T ss_dssp HCC-
T ss_pred hhcc
Confidence 6544
No 54
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.72 E-value=7.5e-17 Score=129.53 Aligned_cols=141 Identities=14% Similarity=0.239 Sum_probs=102.7
Q ss_pred CcEEEEEehhHHHHHHHHhccCCcccccccccc--cCceEEeCCCcHHHHHHHhHhCCCcEeeEeeC--CeEEEEEeHHH
Q 021709 16 ALLCGILTDKDIATRVIARELNLEETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAK 91 (308)
Q Consensus 16 ~~~~Giit~~D~~~~~~~~~~~~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~--~~~vGivs~~d 91 (308)
+.-.|.++..+- .++.+...+...+++++|. ++++++++++++.+|++.|.+++++++||+++ ++++|+++..|
T Consensus 19 ~~~~g~l~~~e~--~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~d 96 (172)
T 3lhh_A 19 GSSAGVIEHNEH--AMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQ 96 (172)
T ss_dssp --------------------------CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHH
T ss_pred HHHcCCCCHHHH--HHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHH
Confidence 334566665443 3344445677789999999 78899999999999999999999999999984 89999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHH
Q 021709 92 CLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKML 171 (308)
Q Consensus 92 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~ 171 (308)
+++.... -...++.++| +++.++++++++.++++.|.
T Consensus 97 l~~~~~~----------------------------------------~~~~~v~~im---~~~~~v~~~~~l~~a~~~m~ 133 (172)
T 3lhh_A 97 LLSESIA----------------------------------------GERLELVDLV---KNCNFVPNSLSGMELLEHFR 133 (172)
T ss_dssp HHHHHHT----------------------------------------TCCCCGGGGC---BCCEEEETTCCHHHHHHHHH
T ss_pred HHHHHhh----------------------------------------cCcccHHHHh---cCCeEeCCCCCHHHHHHHHH
Confidence 9865210 0134688888 46899999999999999999
Q ss_pred HcCCcEEEEee-CCEEEEEeeHHHHHHHHHh
Q 021709 172 ELRLSSAVVTV-ENKPRGILTSKDILMRVIS 201 (308)
Q Consensus 172 ~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~ 201 (308)
+++.+.+||++ +|+++|+||..|++..+..
T Consensus 134 ~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 134 TTGSQMVFVVDEYGDLKGLVTLQDMMDALTG 164 (172)
T ss_dssp HHTCSEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred HcCCeEEEEEeCCCCEEEEeeHHHHHHHHhC
Confidence 99999999999 7999999999999855543
No 55
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.72 E-value=6.9e-17 Score=128.32 Aligned_cols=128 Identities=10% Similarity=0.156 Sum_probs=108.6
Q ss_pred cCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee---CCEEEEEeeHHHHHHHHHhcCCC----ccccccc
Q 021709 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV---ENKPRGILTSKDILMRVISQNLP----ADSTLVE 212 (308)
Q Consensus 140 ~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~---~~~~~Givt~~dl~~~~~~~~~~----~~~~~v~ 212 (308)
...+++++|. +++.++++++++.++++.|.+++++++||++ +|+++|++|..|++ ..+..... ....++.
T Consensus 11 ~~~~v~dim~--~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~-~~~~~~~~~~~~~~~~~v~ 87 (164)
T 2pfi_A 11 HHVRVEHFMN--HSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLV-QALQAEPPSRAPGHQQCLQ 87 (164)
T ss_dssp CSCBHHHHCB--CCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHH-HHHHC-------CCCCBHH
T ss_pred cCCCHHHHcC--CCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHH-HHHHhhccccCCcccchhh
Confidence 3456888997 6899999999999999999999999999998 48999999999996 44433221 1234688
Q ss_pred cccccC------ceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHHhcC
Q 021709 213 KVMTPN------PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGN 271 (308)
Q Consensus 213 ~~~~~~------~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~~~~ 271 (308)
++|..+ +.++++++++.+++++|.+++.+++||+| +|+++|+||..||++++......
T Consensus 88 ~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~~~~~~ 151 (164)
T 2pfi_A 88 DILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAISNLTNP 151 (164)
T ss_dssp HHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHHHHHSC
T ss_pred hhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHHhhhCC
Confidence 888766 78999999999999999999999999999 79999999999999988876654
No 56
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.72 E-value=3.9e-17 Score=135.77 Aligned_cols=161 Identities=16% Similarity=0.114 Sum_probs=103.6
Q ss_pred ccccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhh
Q 021709 40 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (308)
Q Consensus 40 ~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (308)
..+++++|.++++++.+++++.+|+++|.+++++++||+| +++++|+++..|+.+.
T Consensus 12 ~~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~----------------------- 68 (213)
T 1vr9_A 12 HMKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDL----------------------- 68 (213)
T ss_dssp -CBGGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTS-----------------------
T ss_pred ccCHHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhh-----------------------
Confidence 4578999999999999999999999999999999999998 7899999999998632
Q ss_pred hccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHH
Q 021709 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 197 (308)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~ 197 (308)
....++.++|. +++.++++++++.+++++|.+++++++||++ +|+++|++|.+|++.
T Consensus 69 --------------------~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~ 126 (213)
T 1vr9_A 69 --------------------DLDSSVFNKVS--LPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLE 126 (213)
T ss_dssp --------------------CTTSBSGGGCB--CTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHH
T ss_pred --------------------cCCCcHHHHcc--CCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHH
Confidence 11345889997 6899999999999999999999999999999 699999999999974
Q ss_pred HHHhcCCCcccccccccccc-CceeecCCCCHHHHHHHHHhCCCCEEEEECCCCc
Q 021709 198 RVISQNLPADSTLVEKVMTP-NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGD 251 (308)
Q Consensus 198 ~~~~~~~~~~~~~v~~~~~~-~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~ 251 (308)
.+. .... ....+.. .+.+.....++.++.+.|.+++.+.++|++.+|.
T Consensus 127 ~~~-~~~~-----~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~~~~~ 175 (213)
T 1vr9_A 127 ALI-EALA-----MDVPGIRFSVLLEDKPGELRKVVDALALSNINILSVITTRSG 175 (213)
T ss_dssp HHH-HSCC-----------------------------------------------
T ss_pred HHH-HHhc-----CCCCcEEEEEEeCCCCccHHHHHHHHHHCCCcEEEEEEEecC
Confidence 443 2221 1111211 1111233456999999999999999999865553
No 57
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.70 E-value=2.1e-16 Score=131.43 Aligned_cols=120 Identities=17% Similarity=0.204 Sum_probs=106.8
Q ss_pred CCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcCCCccccccccccccCc
Q 021709 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 219 (308)
Q Consensus 141 ~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~~~ 219 (308)
..++.++|. +++.++.+++++.+++++|.+++.+.+||++ +++++|++|.+|+. ... ...++.++|.+++
T Consensus 12 ~~~~~~~~~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~-~~~------~~~~v~~im~~~~ 82 (213)
T 1vr9_A 12 HMKVKKWVT--QDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLL-DLD------LDSSVFNKVSLPD 82 (213)
T ss_dssp -CBGGGGCB--SCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGT-TSC------TTSBSGGGCBCTT
T ss_pred ccCHHHhhc--CCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHH-hhc------CCCcHHHHccCCC
Confidence 345778887 7899999999999999999999999999999 89999999999995 221 1458999999999
Q ss_pred eeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHHh
Q 021709 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (308)
Q Consensus 220 ~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~~ 269 (308)
.++++++++.+++++|.+++++++||+|++|+++|+||..||++++....
T Consensus 83 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~~ 132 (213)
T 1vr9_A 83 FFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEAL 132 (213)
T ss_dssp CCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHSC
T ss_pred EEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHh
Confidence 99999999999999999999999999998899999999999999776533
No 58
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.70 E-value=1.8e-16 Score=119.55 Aligned_cols=116 Identities=22% Similarity=0.357 Sum_probs=102.6
Q ss_pred cccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhh
Q 021709 41 TPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119 (308)
Q Consensus 41 ~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (308)
++++++|.+++.++++++++.+|++.|.+++++.+||++ +|+++|+++..++++....
T Consensus 1 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~--------------------- 59 (122)
T 3kpb_A 1 TLVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQ--------------------- 59 (122)
T ss_dssp CBHHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHT---------------------
T ss_pred CchHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHh---------------------
Confidence 368899999999999999999999999999999999998 7999999999999765221
Q ss_pred ccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHH
Q 021709 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMR 198 (308)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~ 198 (308)
...++.++|. +++.++++++++.++++.|.+++.+++||++ +|+++|++|..|++ +
T Consensus 60 --------------------~~~~v~~~~~--~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~-~ 116 (122)
T 3kpb_A 60 --------------------NKKTIEEIMT--RNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDIS-R 116 (122)
T ss_dssp --------------------TCCBGGGTSB--SSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHH-H
T ss_pred --------------------cccCHHHHhc--CCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHH-H
Confidence 1236888887 6889999999999999999999999999999 69999999999997 4
Q ss_pred HH
Q 021709 199 VI 200 (308)
Q Consensus 199 ~~ 200 (308)
.+
T Consensus 117 ~l 118 (122)
T 3kpb_A 117 LF 118 (122)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 59
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.70 E-value=2.9e-16 Score=118.87 Aligned_cols=119 Identities=19% Similarity=0.239 Sum_probs=102.7
Q ss_pred ccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEeeCCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhhcc
Q 021709 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHW 121 (308)
Q Consensus 42 ~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (308)
+++++|.+++.++++++++.+|++.|.+++.+.+||+|+|+++|+++..|+++.....
T Consensus 2 ~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~G~it~~dl~~~~~~~---------------------- 59 (125)
T 1pbj_A 2 RVEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVKEGVRVGIVTTWDVLEAIAEG---------------------- 59 (125)
T ss_dssp CHHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEETTEEEEEEEHHHHHHHHHHT----------------------
T ss_pred CHHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEeCCeeEEEEeHHHHHHHHhcC----------------------
Confidence 5789999999999999999999999999999999999999999999999997542210
Q ss_pred CCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEeeCCEEEEEeeHHHHHHHH
Q 021709 122 GTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRV 199 (308)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~ 199 (308)
......++.++|. +++.++++++++.++++.|.+++.+.+||+++|+++|++|..|++..+
T Consensus 60 ---------------~~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~Gvit~~dl~~~l 120 (125)
T 1pbj_A 60 ---------------DDLAEVKVWEVME--RDLVTISPRATIKEAAEKMVKNVVWRLLVEEDDEIIGVISATDILRAK 120 (125)
T ss_dssp ---------------CCTTTSBHHHHCB--CGGGEECTTSCHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHH
T ss_pred ---------------CcccccCHHHHcC--CCCeEECCCCCHHHHHHHHHhcCCcEEEEEECCEEEEEEEHHHHHHHH
Confidence 0012345778887 689999999999999999999999999999989999999999997433
No 60
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.70 E-value=2.6e-16 Score=120.63 Aligned_cols=122 Identities=15% Similarity=0.186 Sum_probs=105.4
Q ss_pred cccccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEeeCCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhh
Q 021709 39 EETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (308)
Q Consensus 39 ~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (308)
.+.+++++|.+++.++++++++.+|++.|.+++++.+||+++|+++|+++..++++.....
T Consensus 2 ~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~------------------- 62 (133)
T 2ef7_A 2 EEEIVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVDGNKPVGIITERDIVKAIGKG------------------- 62 (133)
T ss_dssp CCCBGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHHTT-------------------
T ss_pred CcccHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEcHHHHHHHHhcC-------------------
Confidence 3568999999999999999999999999999999999999999999999999997542100
Q ss_pred hccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHH
Q 021709 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 197 (308)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~ 197 (308)
.....++.++|. +++.++++++++.++++.|.+++.+.+||++ +|+++|++|..|++.
T Consensus 63 -------------------~~~~~~v~~~~~--~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~ 121 (133)
T 2ef7_A 63 -------------------KSLETKAEEFMT--ASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITR 121 (133)
T ss_dssp -------------------CCTTCBGGGTSE--ECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHH
T ss_pred -------------------CCcccCHHHHcC--CCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHH
Confidence 012356888887 6889999999999999999999999999999 899999999999974
Q ss_pred HHH
Q 021709 198 RVI 200 (308)
Q Consensus 198 ~~~ 200 (308)
.+.
T Consensus 122 ~~~ 124 (133)
T 2ef7_A 122 AID 124 (133)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 61
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.70 E-value=2.6e-16 Score=125.39 Aligned_cols=126 Identities=17% Similarity=0.162 Sum_probs=108.1
Q ss_pred cCCccccccccccc---CceEEeCCCcHHHHHHHhHhCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHH
Q 021709 36 LNLEETPVSKVMTR---NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIA 111 (308)
Q Consensus 36 ~~~~~~~v~~im~~---~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~ 111 (308)
......+++++|.+ +++++.+++++.+|++.|.+++++.+||++ +|+++|+++..|+++......
T Consensus 19 ~~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~----------- 87 (165)
T 3fhm_A 19 FQGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQG----------- 87 (165)
T ss_dssp CSSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHG-----------
T ss_pred HhhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcC-----------
Confidence 35566789999985 699999999999999999999999999998 689999999999986633210
Q ss_pred HHhhhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEeeCCEEEEEee
Q 021709 112 AAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILT 191 (308)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~Givt 191 (308)
......++.++|. +++.++.+++++.++++.|.+++.+++||+++|+++|+||
T Consensus 88 -------------------------~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~g~~~Giit 140 (165)
T 3fhm_A 88 -------------------------AASLQQSVSVAMT--KNVVRCQHNSTTDQLMEIMTGGRFRHVPVEENGRLAGIIS 140 (165)
T ss_dssp -------------------------GGGGTSBGGGTSB--SSCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEE
T ss_pred -------------------------CccccCCHHHHhc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEE
Confidence 0123456889997 7899999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 021709 192 SKDILMRV 199 (308)
Q Consensus 192 ~~dl~~~~ 199 (308)
..|++..+
T Consensus 141 ~~dil~~~ 148 (165)
T 3fhm_A 141 IGDVVKAR 148 (165)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 99997443
No 62
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.69 E-value=1.8e-16 Score=120.85 Aligned_cols=120 Identities=11% Similarity=0.158 Sum_probs=104.1
Q ss_pred cccccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEeeCCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhh
Q 021709 39 EETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (308)
Q Consensus 39 ~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (308)
...+++++|.+++.++++++++.+|++.|.+++++.+||+++|+++|+++..|+++....
T Consensus 3 ~s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~-------------------- 62 (128)
T 3gby_A 3 ASVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDGERYLGMVHLSRLLEGRKG-------------------- 62 (128)
T ss_dssp TTCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHTTCSS--------------------
T ss_pred cceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEECCEEEEEEEHHHHHHHHhh--------------------
Confidence 467899999999999999999999999999999999999999999999999999743100
Q ss_pred hccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHH
Q 021709 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 197 (308)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~ 197 (308)
. .....++.++|. +++.++++++++.++++.|.+++.+++||++ +|+++|++|..|+++
T Consensus 63 -----~-------------~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~ 122 (128)
T 3gby_A 63 -----W-------------PTVKEKLGEELL--ETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILG 122 (128)
T ss_dssp -----S-------------CCTTCBCCGGGC--BCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHH
T ss_pred -----C-------------CcccCcHHHHcc--CCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHH
Confidence 0 001245888887 7889999999999999999999999999998 899999999999973
Q ss_pred H
Q 021709 198 R 198 (308)
Q Consensus 198 ~ 198 (308)
.
T Consensus 123 ~ 123 (128)
T 3gby_A 123 F 123 (128)
T ss_dssp H
T ss_pred H
Confidence 3
No 63
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.69 E-value=1.4e-16 Score=121.79 Aligned_cols=121 Identities=18% Similarity=0.194 Sum_probs=100.0
Q ss_pred Cccccccccccc--CceEEeCCCcHHHHHHHhHhCCCcEeeEee-C-CeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHH
Q 021709 38 LEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113 (308)
Q Consensus 38 ~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~-~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~ 113 (308)
+.+.+++++|.+ .++++++++++.+|++.|.+++++++||++ + |+++|+++..|+++.....
T Consensus 3 l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~-------------- 68 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSG-------------- 68 (130)
T ss_dssp ----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTT--------------
T ss_pred cCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcC--------------
Confidence 456789999984 567999999999999999999999999998 4 8999999999998652210
Q ss_pred hhhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeH
Q 021709 114 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTS 192 (308)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~ 192 (308)
....++.++|. ++.++++++++.++++.|.+++.+.+||++ +|+++|++|.
T Consensus 69 -------------------------~~~~~v~~~m~---~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~ 120 (130)
T 3i8n_A 69 -------------------------SGQKQLGAVMR---PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTL 120 (130)
T ss_dssp -------------------------TTTSBHHHHSE---ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEH
T ss_pred -------------------------CCcCCHHHHhc---CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEH
Confidence 11345777774 488999999999999999999999999998 7999999999
Q ss_pred HHHHHHHH
Q 021709 193 KDILMRVI 200 (308)
Q Consensus 193 ~dl~~~~~ 200 (308)
.|+++.+.
T Consensus 121 ~dil~~l~ 128 (130)
T 3i8n_A 121 EDIFEHLV 128 (130)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 99985543
No 64
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.68 E-value=1.3e-16 Score=121.86 Aligned_cols=118 Identities=16% Similarity=0.237 Sum_probs=100.9
Q ss_pred cccccccccc--cCceEEeCCCcHHHHHHHhHhCCCcEeeEeeC--CeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHh
Q 021709 39 EETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (308)
Q Consensus 39 ~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~--~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~ 114 (308)
.+.+++++|. ++++++++++++.+|++.|.+++++++||+++ ++++|+++..|+++...
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~----------------- 65 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYML----------------- 65 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGT-----------------
T ss_pred CCCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhc-----------------
Confidence 4568999998 67899999999999999999999999999984 89999999999874310
Q ss_pred hhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHH
Q 021709 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSK 193 (308)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~ 193 (308)
....++.++|. ++.++++++++.++++.|.+++.+.+||++ +|+++|++|..
T Consensus 66 ------------------------~~~~~v~~~m~---~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~ 118 (129)
T 3jtf_A 66 ------------------------EPALDIRSLVR---PAVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTME 118 (129)
T ss_dssp ------------------------CTTSCGGGGCB---CCCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHH
T ss_pred ------------------------cCCcCHHHHhC---CCeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHH
Confidence 01345788885 488999999999999999999999999999 69999999999
Q ss_pred HHHHHHH
Q 021709 194 DILMRVI 200 (308)
Q Consensus 194 dl~~~~~ 200 (308)
|+++.+.
T Consensus 119 Dil~~l~ 125 (129)
T 3jtf_A 119 DVLEQIV 125 (129)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9985554
No 65
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.68 E-value=4.8e-16 Score=123.25 Aligned_cols=129 Identities=20% Similarity=0.312 Sum_probs=106.0
Q ss_pred ccccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhh
Q 021709 40 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (308)
Q Consensus 40 ~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (308)
..+++++|.++++++.+++++.+|+++|.+++++.+||+| +|+++|+++..|+++..........
T Consensus 4 ~~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~-------------- 69 (160)
T 2o16_A 4 MIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSA-------------- 69 (160)
T ss_dssp CCBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC-----------------
T ss_pred cCcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccc--------------
Confidence 4689999999999999999999999999999999999998 6899999999999876432110000
Q ss_pred hccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEeeCCEEEEEeeHHHHHHH
Q 021709 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMR 198 (308)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~ 198 (308)
.........++.++|. +++.++++++++.++++.|.+++.+.+||+++|+++|+||..|++..
T Consensus 70 ---------------~~~~~~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~g~lvGiit~~dil~~ 132 (160)
T 2o16_A 70 ---------------QGDSLAFETPLFEVMH--TDVTSVAPQAGLKESAIYMQKHKIGCLPVVAKDVLVGIITDSDFVTI 132 (160)
T ss_dssp ---------------------CCCBHHHHSC--SCEEEBCTTSBHHHHHHHHHHTTCSCEEEEETTEEEEEECHHHHHHH
T ss_pred ---------------cccchhcccCHHHHhc--CCCeEECCCCCHHHHHHHHHHhCCCEEEEEECCEEEEEEEHHHHHHH
Confidence 0001123456888887 68999999999999999999999999999999999999999999744
Q ss_pred H
Q 021709 199 V 199 (308)
Q Consensus 199 ~ 199 (308)
+
T Consensus 133 ~ 133 (160)
T 2o16_A 133 A 133 (160)
T ss_dssp H
T ss_pred H
Confidence 3
No 66
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.68 E-value=2.5e-16 Score=124.39 Aligned_cols=123 Identities=20% Similarity=0.223 Sum_probs=101.9
Q ss_pred cccccccc--cCceEEeCCCcHHHHHHHhHhCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhh
Q 021709 41 TPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGV 117 (308)
Q Consensus 41 ~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~ 117 (308)
.+++++|. .+++++.++.++.+|+.+|.+++++++||+| +|+++|+++..|+++.......
T Consensus 15 ~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~---------------- 78 (156)
T 3k6e_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDL---------------- 78 (156)
T ss_dssp TTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTC----------------
T ss_pred ccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhccc----------------
Confidence 47889997 4789999999999999999999999999998 5999999999999876432100
Q ss_pred hhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHH
Q 021709 118 EKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL 196 (308)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~ 196 (308)
........++.++|. +++.++++++++.++++.|.+++ .+||++ +|+++|+||.+|++
T Consensus 79 -----------------~~~~~~~~~v~~im~--~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil 137 (156)
T 3k6e_A 79 -----------------SQEIMADTDIVHMTK--TDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSIL 137 (156)
T ss_dssp -----------------CHHHHTTSBGGGTCB--CSCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHH
T ss_pred -----------------ccccccccCHHHhhc--CCceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHH
Confidence 011234567899998 78999999999999999998765 499998 89999999999998
Q ss_pred HHHH
Q 021709 197 MRVI 200 (308)
Q Consensus 197 ~~~~ 200 (308)
+.+.
T Consensus 138 ~~~~ 141 (156)
T 3k6e_A 138 KAVN 141 (156)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5553
No 67
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.68 E-value=5.7e-16 Score=119.06 Aligned_cols=120 Identities=16% Similarity=0.208 Sum_probs=103.5
Q ss_pred ccccccc---cCceEEeCCCcHHHHHHHhHhCCCcEeeEeeCCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhh
Q 021709 42 PVSKVMT---RNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (308)
Q Consensus 42 ~v~~im~---~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (308)
+++++|. ++++++++++++.+|++.|.+++++.+||+++|+++|+++..|+++.....
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~------------------- 67 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMKDEKLVGILTERDFSRKSYLL------------------- 67 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHGGGS-------------------
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEehHHHHHHHHHc-------------------
Confidence 7899998 899999999999999999999999999999999999999999997532110
Q ss_pred hccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEeeCCEEEEEeeHHHHHHH
Q 021709 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMR 198 (308)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~ 198 (308)
+ ......++.++|. +++.++++++++.++++.|.+++.+.+||+++|+++|++|..|++..
T Consensus 68 ---~--------------~~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~~~Giit~~dll~~ 128 (135)
T 2rc3_A 68 ---D--------------KPVKDTQVKEIMT--RQVAYVDLNNTNEDCMALITEMRVRHLPVLDDGKVIGLLSIGDLVKD 128 (135)
T ss_dssp ---S--------------SCGGGSBGGGTSB--CSCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHH
T ss_pred ---C--------------CCcccCCHHHhcc--CCCeEECCCCcHHHHHHHHHHhCCCEEEEEeCCEEEEEEEHHHHHHH
Confidence 0 0022456888997 68999999999999999999999999999998999999999999744
Q ss_pred H
Q 021709 199 V 199 (308)
Q Consensus 199 ~ 199 (308)
+
T Consensus 129 ~ 129 (135)
T 2rc3_A 129 A 129 (135)
T ss_dssp H
T ss_pred H
Confidence 4
No 68
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.68 E-value=4.8e-16 Score=122.69 Aligned_cols=137 Identities=17% Similarity=0.232 Sum_probs=105.4
Q ss_pred cccccccc------cCceEEeCCCcHHHHHHHhHhCCCcEeeEeeCCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHh
Q 021709 41 TPVSKVMT------RNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (308)
Q Consensus 41 ~~v~~im~------~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~ 114 (308)
.+++++|. ++++++++++++.+|++.|.+++++.+||.++|+++|+++..|+++......
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~~~~-------------- 72 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVDGDDIAGIVTERDYARKVVLQE-------------- 72 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEESSSSEEEEEEHHHHHHHSGGGT--------------
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEeeCCEEEEEEEHHHHHHHHHhcc--------------
Confidence 36888888 4569999999999999999999999999987899999999999986522100
Q ss_pred hhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEeeCCEEEEEeeHHH
Q 021709 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKD 194 (308)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~Givt~~d 194 (308)
......++.++|. +++.++++++++.++++.|.+++++++||+++|+++|++|..|
T Consensus 73 ----------------------~~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~~~Giit~~d 128 (157)
T 4fry_A 73 ----------------------RSSKATRVEEIMT--AKVRYVEPSQSTDECMALMTEHRMRHLPVLDGGKLIGLISIGD 128 (157)
T ss_dssp ----------------------CCSSSCBHHHHSB--SSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHH
T ss_pred ----------------------CCccccCHHHHcC--CCCcEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHH
Confidence 0012456788887 6899999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCccccccccccc
Q 021709 195 ILMRVISQNLPADSTLVEKVMT 216 (308)
Q Consensus 195 l~~~~~~~~~~~~~~~v~~~~~ 216 (308)
++..+... .......+..++.
T Consensus 129 il~~l~~~-~~~~~~~~~~~i~ 149 (157)
T 4fry_A 129 LVKSVIAD-QQFTISQLEHYIH 149 (157)
T ss_dssp HHHHHHTT-CCCCCC-------
T ss_pred HHHHHHHH-HHhhHHHHHhhcc
Confidence 97544433 3322334455544
No 69
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.68 E-value=3.4e-16 Score=135.90 Aligned_cols=122 Identities=20% Similarity=0.294 Sum_probs=109.1
Q ss_pred cCCCcccccCCCCceeEeCCCCcHHHHHHHHHHc-----CCcEEEEee-CCEEEEEeeHHHHHHHHHhcCCCcccccccc
Q 021709 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL-----RLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEK 213 (308)
Q Consensus 140 ~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~ 213 (308)
...+++++|. ++++++++++++.++++.|.++ +++++||++ +|+++|+||.+|++. . ....++.+
T Consensus 135 ~~~~v~~iM~--~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~------~-~~~~~v~~ 205 (286)
T 2oux_A 135 EDETAGAIMT--TEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIV------N-DDDTLIAD 205 (286)
T ss_dssp CTTBHHHHCB--SCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTT------S-CTTSBHHH
T ss_pred ChHHHHHhCC--CCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHc------C-CCCCcHHH
Confidence 3457889998 7899999999999999999987 788899999 899999999999962 1 22568999
Q ss_pred ccccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHHhc
Q 021709 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVG 270 (308)
Q Consensus 214 ~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~~~ 270 (308)
+|.+++.++++++++.+++++|.+++.+++||+|++|+++|+||..||++.+.....
T Consensus 206 im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~e~~ 262 (286)
T 2oux_A 206 ILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDDEAA 262 (286)
T ss_dssp HSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHHH
T ss_pred HcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHHHhH
Confidence 999999999999999999999999999999999999999999999999998775543
No 70
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.67 E-value=9.4e-16 Score=123.19 Aligned_cols=140 Identities=16% Similarity=0.187 Sum_probs=110.6
Q ss_pred CcEEEEEehhHHHHHHHHhccCCcccccccccc--cCceEEeCCCcHHHHHHHhHhCCCcEeeEee-C-CeEEEEEeHHH
Q 021709 16 ALLCGILTDKDIATRVIARELNLEETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAK 91 (308)
Q Consensus 16 ~~~~Giit~~D~~~~~~~~~~~~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~-~~~vGivs~~d 91 (308)
+.--|.++..+- .++.+...+...+++++|. ++++++++++++.+|++.|.++++.++||++ + ++++|+++..|
T Consensus 13 ~~~~g~l~~~e~--~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~D 90 (173)
T 3ocm_A 13 MPAVPAFGVEER--NMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKD 90 (173)
T ss_dssp -----CCCHHHH--HHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHH
T ss_pred HHhcCCcCHHHH--HHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHH
Confidence 344588886654 3444444566789999997 4689999999999999999999999999997 4 79999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHH
Q 021709 92 CLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKML 171 (308)
Q Consensus 92 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~ 171 (308)
++...... ...++. ++ .++.++++++++.++++.|.
T Consensus 91 l~~~~~~~----------------------------------------~~~~v~-~~---~~~~~v~~~~~l~~al~~m~ 126 (173)
T 3ocm_A 91 LVADLITE----------------------------------------GRVRRN-RL---RDPIIVHESIGILRLMDTLK 126 (173)
T ss_dssp HHHHHHHH----------------------------------------SSCCGG-GS---BCCCEECGGGCHHHHHHHHH
T ss_pred HHHHHhcC----------------------------------------CcchhH-hc---CCCeEECCCCcHHHHHHHHH
Confidence 98652210 123455 33 56899999999999999999
Q ss_pred HcCCcEEEEee-CCEEEEEeeHHHHHHHHHh
Q 021709 172 ELRLSSAVVTV-ENKPRGILTSKDILMRVIS 201 (308)
Q Consensus 172 ~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~ 201 (308)
+++.+.+||++ +|+++|+||..|++..+..
T Consensus 127 ~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~ 157 (173)
T 3ocm_A 127 RSRGQLVLVADEFGAIEGLVTPIDVFEAIAG 157 (173)
T ss_dssp HSTTCCEEEECTTCCEEEEECHHHHHHHHHC
T ss_pred HcCCeEEEEEeCCCCEEEEEeHHHHHHHHhC
Confidence 99999999998 8999999999999865553
No 71
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.67 E-value=2.9e-16 Score=123.49 Aligned_cols=120 Identities=21% Similarity=0.291 Sum_probs=104.1
Q ss_pred Cccccccccccc--CceEEeCCCcHHHHHHHhHhCCCcEeeEe-e--CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHH
Q 021709 38 LEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVV-E--NGEVIALLDIAKCLYDAIARMERAAEKGKAIAA 112 (308)
Q Consensus 38 ~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pVv-d--~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~ 112 (308)
+.+.+++++|.+ +++++++++++.+|++.|.+++++++||+ + +|+++|+++..|+++.....
T Consensus 17 l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~------------- 83 (153)
T 3oco_A 17 MNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARID------------- 83 (153)
T ss_dssp HHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHH-------------
T ss_pred cCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcC-------------
Confidence 456789999986 89999999999999999999999999999 5 38999999999998653211
Q ss_pred HhhhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEee
Q 021709 113 AVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILT 191 (308)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt 191 (308)
...++.++| +++.++++++++.++++.|.+++.+.+||++ +|+++|+||
T Consensus 84 ---------------------------~~~~v~~~m---~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt 133 (153)
T 3oco_A 84 ---------------------------DKAKISTIM---RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIIT 133 (153)
T ss_dssp ---------------------------TTSBGGGTC---BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEEC
T ss_pred ---------------------------CCCcHHHHh---CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEee
Confidence 134578888 3689999999999999999999999999999 799999999
Q ss_pred HHHHHHHHH
Q 021709 192 SKDILMRVI 200 (308)
Q Consensus 192 ~~dl~~~~~ 200 (308)
..|++..+.
T Consensus 134 ~~dil~~l~ 142 (153)
T 3oco_A 134 DKDVYEELF 142 (153)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999985554
No 72
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.67 E-value=1.2e-15 Score=120.53 Aligned_cols=140 Identities=16% Similarity=0.199 Sum_probs=108.5
Q ss_pred ccCCcccccccccccCceEEeCCCcHHHHHHHhHhCCCcE-eeEeeCCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHH
Q 021709 35 ELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH-LPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113 (308)
Q Consensus 35 ~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~-~pVvd~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~ 113 (308)
+......+++++|.++++++.+++++.+|++.|.+++++. +||+|+++++|+++..|+++.....+
T Consensus 10 ~~~~~~~~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~~~vGivt~~dl~~~~~~~~------------- 76 (157)
T 1o50_A 10 HHHMKVKDVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDNKLVGMIPVMHLLKVSGFHF------------- 76 (157)
T ss_dssp CTTCBHHHHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETTEEEEEEEHHHHHHHHHHHH-------------
T ss_pred hhhhccccHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECCEEEEEEEHHHHHHHHhhhH-------------
Confidence 3456677899999999999999999999999999999999 99999559999999999987543211
Q ss_pred hhhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeH
Q 021709 114 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTS 192 (308)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~ 192 (308)
.... .....+.. ........++.++|. + +.++++++++.++++.|.+++.+++||++ +|+++|+||.
T Consensus 77 ----~~~~----~~~~~~~~-~~~~~~~~~v~~im~--~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~ 144 (157)
T 1o50_A 77 ----FGFI----PKEELIRS-SMKRLIAKNASEIML--D-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNS 144 (157)
T ss_dssp ----HCCC----C--------CCCCCSSCBHHHHCB--C-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEH
T ss_pred ----Hhhh----ccHHHHHH-HHHHHcCCcHHHHcC--C-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEH
Confidence 0000 00000000 000123456788897 6 99999999999999999999999999999 8999999999
Q ss_pred HHHHHHH
Q 021709 193 KDILMRV 199 (308)
Q Consensus 193 ~dl~~~~ 199 (308)
.|+++.+
T Consensus 145 ~dll~~l 151 (157)
T 1o50_A 145 LEILLAL 151 (157)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9997444
No 73
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.67 E-value=7e-17 Score=122.95 Aligned_cols=118 Identities=17% Similarity=0.190 Sum_probs=99.8
Q ss_pred ccccccccccC--ceEEeCCCcHHHHHHHhHhCCCcEeeEeeC--CeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhh
Q 021709 40 ETPVSKVMTRN--PTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 115 (308)
Q Consensus 40 ~~~v~~im~~~--~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~--~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~ 115 (308)
+.+++++|.+. ++++++++++.+|++.|.+++++++||+++ |+++|+++..|+++....
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~----------------- 64 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRS----------------- 64 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGST-----------------
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhc-----------------
Confidence 45789999955 999999999999999999999999999984 799999999998753110
Q ss_pred hhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHH
Q 021709 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKD 194 (308)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~d 194 (308)
.....++.++|. ++.++++++++.++++.|.+++.+++||++ +|+++|++|..|
T Consensus 65 ----------------------~~~~~~v~~~m~---~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~d 119 (127)
T 3nqr_A 65 ----------------------DAEAFSMDKVLR---TAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIED 119 (127)
T ss_dssp ----------------------TCCCCCHHHHCB---CCCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHH
T ss_pred ----------------------cCCCCCHHHHcC---CCeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHH
Confidence 012345777885 378899999999999999999999999999 899999999999
Q ss_pred HHHHH
Q 021709 195 ILMRV 199 (308)
Q Consensus 195 l~~~~ 199 (308)
+++.+
T Consensus 120 ll~~l 124 (127)
T 3nqr_A 120 ILELI 124 (127)
T ss_dssp HHHHC
T ss_pred HHHHH
Confidence 97543
No 74
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.67 E-value=1.4e-15 Score=120.36 Aligned_cols=125 Identities=15% Similarity=0.248 Sum_probs=105.3
Q ss_pred CcccccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhh
Q 021709 38 LEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (308)
Q Consensus 38 ~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~ 116 (308)
+...+++++|.+ ++++.+++++.+|++.|.+++++.+||++ +|+++|+++..|+++.....
T Consensus 14 l~~~~v~~im~~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~----------------- 75 (159)
T 3fv6_A 14 LKKLQVKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQ----------------- 75 (159)
T ss_dssp HTTCBGGGSCBC-CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSC-----------------
T ss_pred HhhCCHHHHcCC-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhcc-----------------
Confidence 456799999987 56999999999999999999999999998 79999999999998652210
Q ss_pred hhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CC---EEEEEeeH
Q 021709 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-EN---KPRGILTS 192 (308)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~---~~~Givt~ 192 (308)
......++.++|.+..++.++.+++++.++++.|.+++++++||++ +| +++|+||.
T Consensus 76 --------------------~~~~~~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~ 135 (159)
T 3fv6_A 76 --------------------QELTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTK 135 (159)
T ss_dssp --------------------SCTTTCBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEH
T ss_pred --------------------CcccCcCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEH
Confidence 0123456889997323889999999999999999999999999999 66 99999999
Q ss_pred HHHHHHHH
Q 021709 193 KDILMRVI 200 (308)
Q Consensus 193 ~dl~~~~~ 200 (308)
.|++..+.
T Consensus 136 ~dil~~l~ 143 (159)
T 3fv6_A 136 TNMTKILV 143 (159)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99975544
No 75
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.66 E-value=7.3e-16 Score=117.84 Aligned_cols=120 Identities=9% Similarity=0.149 Sum_probs=98.2
Q ss_pred cccccccc--cCceEEeCCCcHHHHHHHhHhCCCcEeeEeeC--CeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhh
Q 021709 41 TPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (308)
Q Consensus 41 ~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~--~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~ 116 (308)
.+++++|. ++++++++++++.+|++.|.+++++++||+++ |+++|+++..|+++.....
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~----------------- 64 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEK----------------- 64 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSS-----------------
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhcc-----------------
Confidence 57899996 46899999999999999999999999999963 8999999999998652210
Q ss_pred hhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHH
Q 021709 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI 195 (308)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl 195 (308)
. . ....++.++| .++.++++++++.++++.|.+++.+.+||++ +|+++|++|..|+
T Consensus 65 ------~-----~---------~~~~~v~~~m---~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Di 121 (130)
T 3hf7_A 65 ------K-----E---------FTKEIMLRAA---DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDI 121 (130)
T ss_dssp ------S-----C---------CCHHHHHHHS---BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHH
T ss_pred ------C-----c---------cchhhHHHhc---cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHH
Confidence 0 0 0001245556 3578999999999999999999999999998 8999999999999
Q ss_pred HHHHH
Q 021709 196 LMRVI 200 (308)
Q Consensus 196 ~~~~~ 200 (308)
++.+.
T Consensus 122 l~~l~ 126 (130)
T 3hf7_A 122 LEEIV 126 (130)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 85544
No 76
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.66 E-value=7.8e-16 Score=133.16 Aligned_cols=120 Identities=22% Similarity=0.292 Sum_probs=106.9
Q ss_pred hcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHc-----CCcEEEEee-CCEEEEEeeHHHHHHHHHhcCCCccccccc
Q 021709 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL-----RLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVE 212 (308)
Q Consensus 139 ~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~ 212 (308)
+...+++++|. +++++++++.++.++++.|.+. +++++||++ +++++|+||.+|++ .. ....++.
T Consensus 132 ~~~~~v~~iM~--~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll-~~------~~~~~v~ 202 (278)
T 2yvy_A 132 YEEDEAGGLMT--PEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLI-VA------DPRTRVA 202 (278)
T ss_dssp SCTTBGGGTCB--SCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHH-HS------CTTCBST
T ss_pred CCcchHHhhcC--CCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHh-cC------CCCCcHH
Confidence 34567899998 6899999999999999999987 789999999 89999999999996 21 1256899
Q ss_pred cccccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHH
Q 021709 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (308)
Q Consensus 213 ~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~ 267 (308)
++|.+++.++++++++.+++++|.+++.+.+||+|++|+++|+||..||++.+..
T Consensus 203 ~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 203 EIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp TTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC--
T ss_pred HHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999987654
No 77
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.66 E-value=1e-15 Score=126.32 Aligned_cols=120 Identities=11% Similarity=0.049 Sum_probs=105.8
Q ss_pred cCCcccccccccccCceEEeCCCcHHHHHHHhHhC---CCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHH
Q 021709 36 LNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQG---KFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIA 111 (308)
Q Consensus 36 ~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~---~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~ 111 (308)
..+.+.+++++|.+++++++++.++.+|++.|.++ +++.+||++ +++++|+++.++++..
T Consensus 49 l~~~~~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~---------------- 112 (205)
T 3kxr_A 49 DQYSENEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKH---------------- 112 (205)
T ss_dssp HHSCTTCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTS----------------
T ss_pred hCCCcchHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhC----------------
Confidence 34566789999999999999999999999999987 889999998 6999999999998632
Q ss_pred HHhhhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEe
Q 021709 112 AAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGIL 190 (308)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Giv 190 (308)
....++.++|. +++.++++++++.++++.|.+++.+++||+| +|+++|+|
T Consensus 113 ---------------------------~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiI 163 (205)
T 3kxr_A 113 ---------------------------EPHEPLISLLS--EDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRV 163 (205)
T ss_dssp ---------------------------CTTSBGGGGCC--SSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEE
T ss_pred ---------------------------CCcchHHHHhc--CCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEE
Confidence 12346889997 6899999999999999999999999999999 89999999
Q ss_pred eHHHHHHHHH
Q 021709 191 TSKDILMRVI 200 (308)
Q Consensus 191 t~~dl~~~~~ 200 (308)
|..|++..+.
T Consensus 164 T~~Dil~~i~ 173 (205)
T 3kxr_A 164 TLRAATALVR 173 (205)
T ss_dssp EHHHHHHHHH
T ss_pred EHHHHHHHHH
Confidence 9999985544
No 78
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.66 E-value=1.7e-15 Score=117.29 Aligned_cols=116 Identities=16% Similarity=0.207 Sum_probs=101.2
Q ss_pred ccccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEeeC-C--eEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhh
Q 021709 40 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN-G--EVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (308)
Q Consensus 40 ~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~-~--~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~ 116 (308)
..+++++|.++++++++++++.+|++.|.+++++.+||+++ + +++|+++..|+++.....
T Consensus 4 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~----------------- 66 (141)
T 2rih_A 4 AIRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQR----------------- 66 (141)
T ss_dssp -CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTT-----------------
T ss_pred ceEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcC-----------------
Confidence 35799999999999999999999999999999999999995 5 899999999997642210
Q ss_pred hhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHH
Q 021709 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI 195 (308)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl 195 (308)
.....++.++|. +++.+++++ ++.++++.|.+++.+++||++ +|+++|++|..|+
T Consensus 67 ---------------------~~~~~~v~~~m~--~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dl 122 (141)
T 2rih_A 67 ---------------------LDLDGPAMPIAN--SPITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDL 122 (141)
T ss_dssp ---------------------CCTTSBSGGGCB--CCCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHH
T ss_pred ---------------------CCCCCCHHHHcC--CCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHH
Confidence 012346888987 689999999 999999999999999999999 8999999999999
Q ss_pred H
Q 021709 196 L 196 (308)
Q Consensus 196 ~ 196 (308)
+
T Consensus 123 l 123 (141)
T 2rih_A 123 C 123 (141)
T ss_dssp H
T ss_pred H
Confidence 7
No 79
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.66 E-value=7.1e-16 Score=130.67 Aligned_cols=125 Identities=15% Similarity=0.105 Sum_probs=103.6
Q ss_pred cCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEeeC---CEEEEEeeHHHHHHHHHhc----CC---C----
Q 021709 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE---NKPRGILTSKDILMRVISQ----NL---P---- 205 (308)
Q Consensus 140 ~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~---~~~~Givt~~dl~~~~~~~----~~---~---- 205 (308)
...+++++|. ++++++.+++++.++.++|.+++++.+||+++ ++++|+||++|++..+... .. .
T Consensus 11 ~~~~v~diMt--~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~ 88 (250)
T 2d4z_A 11 YNIQVGDIMV--RDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEA 88 (250)
T ss_dssp SSCBTTSSSB--SSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCB
T ss_pred CCCChHHhcC--CCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhcc
Confidence 3456899998 78999999999999999999999999999983 5899999999997433211 00 0
Q ss_pred -----------------c--------------------------------------------------------------
Q 021709 206 -----------------A-------------------------------------------------------------- 206 (308)
Q Consensus 206 -----------------~-------------------------------------------------------------- 206 (308)
.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (250)
T 2d4z_A 89 DEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFE 168 (250)
T ss_dssp CCC---------------------------------------------------------------------------CC
T ss_pred cccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccc
Confidence 0
Q ss_pred ---------------ccccc--c-cccccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHH
Q 021709 207 ---------------DSTLV--E-KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (308)
Q Consensus 207 ---------------~~~~v--~-~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~ 267 (308)
...++ . .+|++.|.++.++++|.++..+|...+++++||++ .|+++||||++||++++..
T Consensus 169 ~~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~~ 246 (250)
T 2d4z_A 169 EMLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIEG 246 (250)
T ss_dssp SCCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred cccChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 01122 2 36889999999999999999999999999999997 6999999999999998764
No 80
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.66 E-value=4e-15 Score=114.65 Aligned_cols=123 Identities=21% Similarity=0.243 Sum_probs=105.2
Q ss_pred CCcccccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhh
Q 021709 37 NLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 115 (308)
Q Consensus 37 ~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~ 115 (308)
.+...+++++|.++++++++++++.+|++.|.+++++.+||++ +|+++|+++..|+++..+..
T Consensus 3 ~l~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~---------------- 66 (138)
T 2yzi_A 3 MDMKAPIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVP---------------- 66 (138)
T ss_dssp CCTTSBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTT----------------
T ss_pred chhhhhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhc----------------
Confidence 3456789999999999999999999999999999999999998 79999999999997431100
Q ss_pred hhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHH
Q 021709 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKD 194 (308)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~d 194 (308)
......++.++|. +++.++++++++.++++.|.+++.+++ |++ +|+++|++|..|
T Consensus 67 ---------------------~~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~d 122 (138)
T 2yzi_A 67 ---------------------GLPYDIPVERIMT--RNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSD 122 (138)
T ss_dssp ---------------------CCCTTSBGGGTCB--CSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHH
T ss_pred ---------------------CCcccCCHHHHhh--CCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHH
Confidence 0012456888997 689999999999999999999999999 998 999999999999
Q ss_pred HHHHH
Q 021709 195 ILMRV 199 (308)
Q Consensus 195 l~~~~ 199 (308)
++..+
T Consensus 123 il~~~ 127 (138)
T 2yzi_A 123 LLEAS 127 (138)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 97444
No 81
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.65 E-value=1.4e-15 Score=119.06 Aligned_cols=117 Identities=14% Similarity=0.172 Sum_probs=101.6
Q ss_pred ccccccccc--CceEEeCCCcHHHHHHHhHhCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhh
Q 021709 41 TPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGV 117 (308)
Q Consensus 41 ~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~ 117 (308)
.+++++|.+ +++++++++++.+|++.|.+++++.+||++ +|+++|+++..|+++.....
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~------------------ 89 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTG------------------ 89 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSS------------------
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcC------------------
Confidence 589999998 999999999999999999999999999998 68999999999997542100
Q ss_pred hhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEeeCCEEEEEeeHHHHH
Q 021709 118 EKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDIL 196 (308)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dl~ 196 (308)
. .....++.++|. +++.++++++++.++++.|.+++.+.+||+++++++|+||..|++
T Consensus 90 -----~--------------~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~Giit~~dil 147 (149)
T 3k2v_A 90 -----V--------------DMRDASIADVMT--RGGIRIRPGTLAVDALNLMQSRHITCVLVADGDHLLGVVHMHDLL 147 (149)
T ss_dssp -----S--------------CCTTCBHHHHSE--ESCCEECTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHT
T ss_pred -----C--------------CcccCcHHHHcC--CCCeEECCCCCHHHHHHHHHHcCCCEEEEecCCEEEEEEEHHHhh
Confidence 0 012445778887 678999999999999999999999999999966999999999985
No 82
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.65 E-value=1.5e-15 Score=120.58 Aligned_cols=131 Identities=17% Similarity=0.178 Sum_probs=102.4
Q ss_pred CcccccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEee---CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHh
Q 021709 38 LEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE---NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (308)
Q Consensus 38 ~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd---~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~ 114 (308)
....+++++|.++++++++++++.+|++.|.+++++++||+| +|+++|+++..|+++.........
T Consensus 10 ~~~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~----------- 78 (164)
T 2pfi_A 10 SHHVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSR----------- 78 (164)
T ss_dssp CCSCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC----------------
T ss_pred ccCCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhcccc-----------
Confidence 456789999999999999999999999999999999999998 489999999999976532110000
Q ss_pred hhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCC----CceeEeCCCCcHHHHHHHHHHcCCcEEEEeeCCEEEEEe
Q 021709 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEK----SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGIL 190 (308)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~Giv 190 (308)
......++.++|... ..+.++++++++.++++.|.+++.+++||+++|+++|+|
T Consensus 79 ----------------------~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~l~Gii 136 (164)
T 2pfi_A 79 ----------------------APGHQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTSRGRAVGCV 136 (164)
T ss_dssp ------------------------CCCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEETTEEEEEE
T ss_pred ----------------------CCcccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEE
Confidence 000122344444310 117889999999999999999999999999999999999
Q ss_pred eHHHHHHHHHh
Q 021709 191 TSKDILMRVIS 201 (308)
Q Consensus 191 t~~dl~~~~~~ 201 (308)
|..|++..+..
T Consensus 137 t~~dil~~~~~ 147 (164)
T 2pfi_A 137 SWVEMKKAISN 147 (164)
T ss_dssp EHHHHHHHHHH
T ss_pred EHHHHHHHHHh
Confidence 99999855443
No 83
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.65 E-value=2.9e-16 Score=121.00 Aligned_cols=118 Identities=13% Similarity=0.166 Sum_probs=100.5
Q ss_pred ccccccccc--cCceEEeCCCcHHHHHHHhHhCCCcEeeEeeC--CeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhh
Q 021709 40 ETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 115 (308)
Q Consensus 40 ~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~--~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~ 115 (308)
+.+++++|. ++++++++++++.+|++.|.+++++++||+++ ++++|+++..|+++....
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~----------------- 64 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILK----------------- 64 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGS-----------------
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHh-----------------
Confidence 457899998 67899999999999999999999999999984 799999999998754110
Q ss_pred hhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHH
Q 021709 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKD 194 (308)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~d 194 (308)
......++.++|. + +.++++++++.+++++|.+++.+.+||++ +|+++|++|.+|
T Consensus 65 ---------------------~~~~~~~v~~~m~--~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~D 120 (136)
T 3lfr_A 65 ---------------------ADGDSDDVKKLLR--P-ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIED 120 (136)
T ss_dssp ---------------------SSGGGCCGGGTCB--C-CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHH
T ss_pred ---------------------ccCCCcCHHHHcC--C-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHH
Confidence 0012346888885 3 89999999999999999999999999998 899999999999
Q ss_pred HHHH
Q 021709 195 ILMR 198 (308)
Q Consensus 195 l~~~ 198 (308)
+++.
T Consensus 121 il~~ 124 (136)
T 3lfr_A 121 VLEQ 124 (136)
T ss_dssp HHTT
T ss_pred HHHH
Confidence 9743
No 84
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.64 E-value=8.2e-16 Score=118.51 Aligned_cols=122 Identities=26% Similarity=0.358 Sum_probs=103.5
Q ss_pred CcccccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEee-CCeEEEEEeHHHH-HHHHHHHHHHHHHhHHHHHHHhh
Q 021709 38 LEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKC-LYDAIARMERAAEKGKAIAAAVE 115 (308)
Q Consensus 38 ~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~~~vGivs~~dl-l~~~~~~~~~~~~~~~~~~~~~~ 115 (308)
+.+.+++++|.+++.++.+++++.+|++.|.+++++.+||++ +|+++|+++..++ ++....
T Consensus 5 l~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~----------------- 67 (138)
T 2p9m_A 5 LKNIKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRD----------------- 67 (138)
T ss_dssp CTTCBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTT-----------------
T ss_pred cccCCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhh-----------------
Confidence 346789999999999999999999999999999999999998 6999999999998 653110
Q ss_pred hhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcC-----CcEEEEee-CCEEEEE
Q 021709 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR-----LSSAVVTV-ENKPRGI 189 (308)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-----~~~~~V~~-~~~~~Gi 189 (308)
......++.++|. +++.++++++++.++++.|.+++ .+.+||++ +|+++|+
T Consensus 68 ---------------------~~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Gi 124 (138)
T 2p9m_A 68 ---------------------KYTLETTIGDVMT--KDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGI 124 (138)
T ss_dssp ---------------------CCCSSCBHHHHSC--SSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEE
T ss_pred ---------------------cccCCcCHHHHhC--CCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEE
Confidence 0022445778887 67899999999999999999999 99999999 8999999
Q ss_pred eeHHHHHHHH
Q 021709 190 LTSKDILMRV 199 (308)
Q Consensus 190 vt~~dl~~~~ 199 (308)
+|..|+++.+
T Consensus 125 it~~dll~~~ 134 (138)
T 2p9m_A 125 ISDGDIIRTI 134 (138)
T ss_dssp EEHHHHHHHH
T ss_pred EEHHHHHHHH
Confidence 9999997443
No 85
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.64 E-value=1e-14 Score=123.54 Aligned_cols=161 Identities=15% Similarity=0.112 Sum_probs=109.3
Q ss_pred CCcccccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEeeC---CeEEEEEeHHHHHHHHHHHHHHHHH--------
Q 021709 37 NLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN---GEVIALLDIAKCLYDAIARMERAAE-------- 105 (308)
Q Consensus 37 ~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~---~~~vGivs~~dll~~~~~~~~~~~~-------- 105 (308)
...+..++++|.++++++.+++++.+|.++|.+++++++||+++ ++++|+|+..|+++.+.........
T Consensus 9 ~~~~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~ 88 (250)
T 2d4z_A 9 NKYNIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEA 88 (250)
T ss_dssp CCSSCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCB
T ss_pred ccCCCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhcc
Confidence 34567899999999999999999999999999999999999984 5899999999998765433210000
Q ss_pred ---------------hHHHHHHHhhh------hhhc--------------c---------------------------CC
Q 021709 106 ---------------KGKAIAAAVEG------VEKH--------------W---------------------------GT 123 (308)
Q Consensus 106 ---------------~~~~~~~~~~~------~~~~--------------~---------------------------~~ 123 (308)
........... ++.. . ..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (250)
T 2d4z_A 89 DEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFE 168 (250)
T ss_dssp CCC---------------------------------------------------------------------------CC
T ss_pred cccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccc
Confidence 00000000000 0000 0 00
Q ss_pred CCCChhHHHHHHHHHhcCCCc--c-cccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEeeCCEEEEEeeHHHHHHHHH
Q 021709 124 SISGPNTFIETLRERMFRPSL--S-TIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVI 200 (308)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~v--~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~ 200 (308)
....+......... ....++ . .+|. ..++++.+++++.++..+|.+.+++++||++.|+++|+||+.|++ +++
T Consensus 169 ~~i~~~~~~~~~~~-~l~~~Vdl~~~~md--~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~~GrLVGIVTrkDl~-kai 244 (250)
T 2d4z_A 169 EMLTLEEIYRWEQR-EKNVVVNFETCRID--QSPFQLVEGTSLQKTHTLFSLLGLDRAYVTSMGKLVGVVALAEIQ-AAI 244 (250)
T ss_dssp SCCBHHHHHHHHHH-HTTCBCCTTSSCEE--CCSCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH-HHH
T ss_pred cccChhhhhhHHHH-hcCceecccccccc--CCCeEECCCCcHHHHHHHHHHhCCeEEEEEECCEEEEEEEHHHHH-HHH
Confidence 00111111111112 233344 3 3576 789999999999999999999999999999999999999999996 554
Q ss_pred h
Q 021709 201 S 201 (308)
Q Consensus 201 ~ 201 (308)
.
T Consensus 245 ~ 245 (250)
T 2d4z_A 245 E 245 (250)
T ss_dssp H
T ss_pred H
Confidence 3
No 86
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.64 E-value=1.4e-15 Score=119.01 Aligned_cols=127 Identities=17% Similarity=0.197 Sum_probs=104.0
Q ss_pred Ccccccccccc--cCceEEeCCCcHHHHHHHhHhCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHh
Q 021709 38 LEETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (308)
Q Consensus 38 ~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~ 114 (308)
+...+++++|. ++++++.+++++.+|++.|.+++++.+||+| +|+++|+++..|+++.....
T Consensus 12 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~--------------- 76 (150)
T 3lqn_A 12 FQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGL--------------- 76 (150)
T ss_dssp HHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCS---------------
T ss_pred hhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhh---------------
Confidence 45678999998 4599999999999999999999999999998 79999999999998652200
Q ss_pred hhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHH
Q 021709 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSK 193 (308)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~ 193 (308)
.. .. .......++.++|. +++.++++++++.++++.|.++++ +||++ +|+++|+||..
T Consensus 77 --------~~-~~--------~~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~ 135 (150)
T 3lqn_A 77 --------ER-IE--------FERLEEMKVEQVMK--QDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRR 135 (150)
T ss_dssp --------SS-BC--------GGGGGGCBGGGTCB--SSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHH
T ss_pred --------cc-cc--------hhHHhcCCHHHHhc--CCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHH
Confidence 00 00 01123456889997 789999999999999999999886 99999 89999999999
Q ss_pred HHHHHHH
Q 021709 194 DILMRVI 200 (308)
Q Consensus 194 dl~~~~~ 200 (308)
|+++.+.
T Consensus 136 dil~~l~ 142 (150)
T 3lqn_A 136 AILKLLN 142 (150)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9974443
No 87
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.64 E-value=1.6e-15 Score=118.73 Aligned_cols=132 Identities=17% Similarity=0.220 Sum_probs=103.9
Q ss_pred cccccccccc--CceEEeCCCcHHHHHHHhHhCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhh
Q 021709 40 ETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (308)
Q Consensus 40 ~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~ 116 (308)
..+++++|.+ +++++++++++.+|++.|.+++++.+||++ +++++|+++..|+++.......
T Consensus 4 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~--------------- 68 (152)
T 4gqw_A 4 VYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDST--------------- 68 (152)
T ss_dssp CSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----C---------------
T ss_pred eEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCc---------------
Confidence 4689999988 899999999999999999999999999998 5899999999999753211000
Q ss_pred hhhccCCCCCChhHHHHH---HHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeH
Q 021709 117 VEKHWGTSISGPNTFIET---LRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTS 192 (308)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~ 192 (308)
...... ........++.++|. +++.++++++++.++++.|.+++.+++||++ +|+++|+||.
T Consensus 69 ------------~~~~~~~~~~~~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~ 134 (152)
T 4gqw_A 69 ------------WKTFNAVQKLLSKTNGKLVGDLMT--PAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITR 134 (152)
T ss_dssp ------------CHHHHHHHTC-----CCBHHHHSE--ESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEH
T ss_pred ------------ccchHHHHHHHHHhccccHHHhcC--CCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEH
Confidence 000000 001123456888887 6788999999999999999999999999999 8999999999
Q ss_pred HHHHHHHH
Q 021709 193 KDILMRVI 200 (308)
Q Consensus 193 ~dl~~~~~ 200 (308)
+|+++.+.
T Consensus 135 ~dil~~~~ 142 (152)
T 4gqw_A 135 GNVVRAAL 142 (152)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99985444
No 88
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.63 E-value=3.6e-16 Score=123.42 Aligned_cols=119 Identities=18% Similarity=0.219 Sum_probs=101.4
Q ss_pred ccCCccccccccccc--CceEEeCCCcHHHHHHHhHhCCCcEeeEeeC--CeEEEEEeHHHHHHHHHHHHHHHHHhHHHH
Q 021709 35 ELNLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYDAIARMERAAEKGKAI 110 (308)
Q Consensus 35 ~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~--~~~vGivs~~dll~~~~~~~~~~~~~~~~~ 110 (308)
...+...+++++|.+ +++++++++++.+|++.|.+++++++||+++ ++++|+++..|+++....
T Consensus 32 ~~~l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~------------ 99 (156)
T 3oi8_A 32 VLDFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFN------------ 99 (156)
T ss_dssp HHHHTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSC------------
T ss_pred HhccCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHc------------
Confidence 334567899999986 7899999999999999999999999999984 599999999998743110
Q ss_pred HHHhhhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEE
Q 021709 111 AAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGI 189 (308)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Gi 189 (308)
-...++.++|. ++.++++++++.++++.|.+++.+.+||++ +|+++|+
T Consensus 100 ----------------------------~~~~~v~~im~---~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Gi 148 (156)
T 3oi8_A 100 ----------------------------PEQFHLKSILR---PAVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGL 148 (156)
T ss_dssp ----------------------------GGGCCHHHHCB---CCCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEE
T ss_pred ----------------------------CCcccHHHHcC---CCEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEE
Confidence 02345777885 388999999999999999999999999998 8999999
Q ss_pred eeHHHHH
Q 021709 190 LTSKDIL 196 (308)
Q Consensus 190 vt~~dl~ 196 (308)
+|..|++
T Consensus 149 vt~~Dil 155 (156)
T 3oi8_A 149 VTFEDII 155 (156)
T ss_dssp EEHHHHC
T ss_pred EEHHHhc
Confidence 9999984
No 89
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.63 E-value=2.5e-15 Score=116.56 Aligned_cols=127 Identities=18% Similarity=0.272 Sum_probs=100.5
Q ss_pred Cccccccc---ccccCceEEeCCCcHHHHHHHhHhCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHH
Q 021709 38 LEETPVSK---VMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113 (308)
Q Consensus 38 ~~~~~v~~---im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~ 113 (308)
..+.++++ +|.++++++.+++++.+|++.|.+++++.+||++ +|+++|+++..|+++......
T Consensus 5 ~~~~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~------------- 71 (144)
T 2nyc_A 5 FLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGI------------- 71 (144)
T ss_dssp GGGSBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC--------------
T ss_pred hhhcchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcccc-------------
Confidence 34557777 7888999999999999999999999999999998 689999999999976522100
Q ss_pred hhhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCC----CceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEE
Q 021709 114 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEK----SKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRG 188 (308)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~G 188 (308)
......++.++|.+. .++.++++++++.++++.|.+++.+.+||++ +|+++|
T Consensus 72 -----------------------~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~G 128 (144)
T 2nyc_A 72 -----------------------YNDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVG 128 (144)
T ss_dssp --------------------------CCSBHHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEE
T ss_pred -----------------------cccCCccHHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEE
Confidence 001123455555421 1689999999999999999999999999999 899999
Q ss_pred EeeHHHHHHHHH
Q 021709 189 ILTSKDILMRVI 200 (308)
Q Consensus 189 ivt~~dl~~~~~ 200 (308)
++|..|+++.+.
T Consensus 129 iit~~dil~~l~ 140 (144)
T 2nyc_A 129 VLTLSDILKYIL 140 (144)
T ss_dssp EEEHHHHHHHHH
T ss_pred EEEHHHHHHHHH
Confidence 999999975543
No 90
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.62 E-value=6.2e-15 Score=116.17 Aligned_cols=128 Identities=13% Similarity=0.218 Sum_probs=103.2
Q ss_pred CCccccccccccc--CceEEeCCCcHHHHHHHhHhCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHH
Q 021709 37 NLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113 (308)
Q Consensus 37 ~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~ 113 (308)
.+...+++++|.+ +++++.+++++.+|++.|.+++++.+||++ +|+++|+++..++++.....
T Consensus 7 ~l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~-------------- 72 (157)
T 2emq_A 7 EFMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGL-------------- 72 (157)
T ss_dssp ---CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCS--------------
T ss_pred hHhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcc--------------
Confidence 3556789999986 899999999999999999999999999998 69999999999997541100
Q ss_pred hhhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeH
Q 021709 114 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTS 192 (308)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~ 192 (308)
.. .. .......++.++|. +++.++++++++.++++.|.++++ +||++ +|+++|+||.
T Consensus 73 ---------~~----~~-----~~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~ 130 (157)
T 2emq_A 73 ---------ER----IE-----FERLETMKVEEVMN--RNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTR 130 (157)
T ss_dssp ---------SS----BC-----GGGGGTCBGGGTCB--CCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEH
T ss_pred ---------cc----cc-----hHHhcCCcHHHHhC--CCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEH
Confidence 00 00 01123456889997 689999999999999999999877 99999 7999999999
Q ss_pred HHHHHHHH
Q 021709 193 KDILMRVI 200 (308)
Q Consensus 193 ~dl~~~~~ 200 (308)
+|++..+.
T Consensus 131 ~dil~~~~ 138 (157)
T 2emq_A 131 REVLKQLN 138 (157)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99975444
No 91
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.61 E-value=1.4e-15 Score=122.67 Aligned_cols=150 Identities=17% Similarity=0.204 Sum_probs=107.6
Q ss_pred cccccccccc--CceEEeCCCcHHHHHHHhHhCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhh
Q 021709 40 ETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (308)
Q Consensus 40 ~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~ 116 (308)
..+++++|.+ +++++.+++++.+|+++|.+++++.+||++ +|+++|+++..|+++............ .
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~---------~ 73 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDT---------N 73 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC---------------------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcc---------c
Confidence 3578999988 899999999999999999999999999998 689999999999975321110000000 0
Q ss_pred hhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHH
Q 021709 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI 195 (308)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl 195 (308)
+....+..... ..............++.++|. +++.++++++++.++++.|.+++++++||++ +|+++|+||.+|+
T Consensus 74 ~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~di 150 (180)
T 3sl7_A 74 LFPDVDSTWKT-FNELQKLISKTYGKVVGDLMT--PSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNV 150 (180)
T ss_dssp -------CCCS-HHHHHHHHHTTTTCBHHHHSE--ESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHH
T ss_pred ccccccchhhh-hHHHHHHHhccccccHHHHhC--CCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHH
Confidence 00000001111 111111222234567889997 6789999999999999999999999999999 8999999999999
Q ss_pred HHHHHh
Q 021709 196 LMRVIS 201 (308)
Q Consensus 196 ~~~~~~ 201 (308)
++.+..
T Consensus 151 l~~~~~ 156 (180)
T 3sl7_A 151 VRAALQ 156 (180)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 855543
No 92
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.61 E-value=2.6e-15 Score=114.98 Aligned_cols=118 Identities=18% Similarity=0.207 Sum_probs=100.8
Q ss_pred cccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhh
Q 021709 41 TPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119 (308)
Q Consensus 41 ~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (308)
.+++++|.+++.++++++++.+|++.|.+++++.+||+| +|+++|+++..|+++..+..
T Consensus 8 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~-------------------- 67 (133)
T 1y5h_A 8 TTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAA-------------------- 67 (133)
T ss_dssp CCHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGG--------------------
T ss_pred cCHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhc--------------------
Confidence 488999999999999999999999999999999999997 79999999999987321100
Q ss_pred ccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEeeCCEEEEEeeHHHHH
Q 021709 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDIL 196 (308)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dl~ 196 (308)
+. .....++.++|. +++.++++++++.++++.|.+++.+++||+++|+++|++|..|++
T Consensus 68 --~~--------------~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~g~~~Giit~~dil 126 (133)
T 1y5h_A 68 --GL--------------DPNTATAGELAR--DSIYYVDANASIQEMLNVMEEHQVRRVPVISEHRLVGIVTEADIA 126 (133)
T ss_dssp --TC--------------CTTTSBHHHHHT--TCCCCEETTCCHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH
T ss_pred --CC--------------CccccCHHHHhc--CCCEEECCCCCHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHH
Confidence 00 012345777886 688999999999999999999999999999989999999999997
No 93
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.61 E-value=5.1e-15 Score=116.63 Aligned_cols=126 Identities=19% Similarity=0.208 Sum_probs=103.7
Q ss_pred Ccccccccccc--cCceEEeCCCcHHHHHHHhHhCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHh
Q 021709 38 LEETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (308)
Q Consensus 38 ~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~ 114 (308)
+...+++++|. ++++++++++++.+|++.|.+++++++||++ +|+++|+++..|+++.......
T Consensus 12 l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~------------- 78 (156)
T 3ctu_A 12 FLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDL------------- 78 (156)
T ss_dssp HHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTC-------------
T ss_pred HHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccc-------------
Confidence 34457899998 6899999999999999999999999999998 6999999999999876332100
Q ss_pred hhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHH
Q 021709 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSK 193 (308)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~ 193 (308)
........++.++|. .++.++++++++.++++.|.+++ ++||++ +|+++|++|.+
T Consensus 79 --------------------~~~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~ 134 (156)
T 3ctu_A 79 --------------------SQEIMADTDIVHMTK--TDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRK 134 (156)
T ss_dssp --------------------CHHHHTTSBGGGGCB--CSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETT
T ss_pred --------------------cccccccCcHHHhcc--CCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHH
Confidence 001133567899997 68899999999999999999875 799999 89999999999
Q ss_pred HHHHHHH
Q 021709 194 DILMRVI 200 (308)
Q Consensus 194 dl~~~~~ 200 (308)
|+++.+.
T Consensus 135 dil~~l~ 141 (156)
T 3ctu_A 135 SILKAVN 141 (156)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9974443
No 94
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.60 E-value=8.5e-15 Score=118.55 Aligned_cols=147 Identities=16% Similarity=0.158 Sum_probs=106.1
Q ss_pred cccccccccccC----ceEE--eCCCcHHHHHHHhHhCCCcEeeEe--e-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHH
Q 021709 39 EETPVSKVMTRN----PTFV--LSDTLAVEALQKMVQGKFRHLPVV--E-NGEVIALLDIAKCLYDAIARMERAAEKGKA 109 (308)
Q Consensus 39 ~~~~v~~im~~~----~~~v--~~~~~l~~a~~~m~~~~~~~~pVv--d-~~~~vGivs~~dll~~~~~~~~~~~~~~~~ 109 (308)
...+++++|.+. ++++ .+++++.+|+++|.+++++.+||+ + +|+++|+++..|+++........ ..
T Consensus 9 ~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~----~~- 83 (185)
T 2j9l_A 9 HKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKK----QD- 83 (185)
T ss_dssp CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTS----CS-
T ss_pred ccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhccc----CC-
Confidence 467899999876 7888 999999999999999999999999 5 68999999999998654321000 00
Q ss_pred HHHHhhhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEeeCCEEEEE
Q 021709 110 IAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGI 189 (308)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~Gi 189 (308)
....+........ .... ........++.++|. +++.++++++++.++++.|.+++.+++||+++|+++|+
T Consensus 84 --~~~~~~~~~~~~~-~~~~-----~~~~~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~g~~vGi 153 (185)
T 2j9l_A 84 --GVVSTSIIYFTEH-SPPL-----PPYTPPTLKLRNILD--LSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGI 153 (185)
T ss_dssp --CCCTTCEEECSSS-CCCC-----CTTCCCCEECGGGEE--SSCCEEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEE
T ss_pred --CccccceeecccC-Cccc-----ccccccCccHHHhhC--cCCeEeCCCCCHHHHHHHHHhCCCcEEEEEECCEEEEE
Confidence 0000000000000 0000 000012345788887 68999999999999999999999999999999999999
Q ss_pred eeHHHHHHHHH
Q 021709 190 LTSKDILMRVI 200 (308)
Q Consensus 190 vt~~dl~~~~~ 200 (308)
||..|+++.+.
T Consensus 154 it~~dll~~l~ 164 (185)
T 2j9l_A 154 ITKKDVLKHIA 164 (185)
T ss_dssp EEHHHHHHHHH
T ss_pred EEHHHHHHHHH
Confidence 99999975544
No 95
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.60 E-value=1.3e-14 Score=117.63 Aligned_cols=119 Identities=20% Similarity=0.199 Sum_probs=103.1
Q ss_pred ccccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhh
Q 021709 40 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (308)
Q Consensus 40 ~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (308)
..+++++|.++++++.+++++.+|+++|.+++++.+||++ +|+++|+++..|+++.....
T Consensus 8 ~~~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~------------------- 68 (184)
T 1pvm_A 8 FMRVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPR------------------- 68 (184)
T ss_dssp CCBGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGG-------------------
T ss_pred ccCHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhc-------------------
Confidence 4689999999999999999999999999999999999998 68999999999997642100
Q ss_pred hccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHH
Q 021709 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL 196 (308)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~ 196 (308)
.......++.++|. +++.++++++++.++++.|.+++.+.+||++ +|+++|+||..|++
T Consensus 69 -----------------~~~~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll 128 (184)
T 1pvm_A 69 -----------------NKKPDEVPIRLVMR--KPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLS 128 (184)
T ss_dssp -----------------CCCGGGSBGGGTSB--SSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHT
T ss_pred -----------------ccCcccCCHHHHhC--CCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHH
Confidence 00012346888997 6889999999999999999999999999999 69999999999996
No 96
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.59 E-value=4.8e-15 Score=139.25 Aligned_cols=124 Identities=11% Similarity=0.096 Sum_probs=108.1
Q ss_pred CCCcccccCCCCceeEeCCC-CcHHHHHHHHHHcCCcEEEEee--CCEEEEEeeHHHHHHHHHhcCCCcccccccccccc
Q 021709 141 RPSLSTIIPEKSKVVTISPT-DTVLMATKKMLELRLSSAVVTV--ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP 217 (308)
Q Consensus 141 ~~~v~~~~~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~~~V~~--~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~ 217 (308)
..++.++|. ++++++.++ +++.+++++|.+++++++||++ +++++|+||.+|+++.+..... ....++.++|.+
T Consensus 383 ~~~V~diM~--~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~-~~~~~V~~im~~ 459 (527)
T 3pc3_A 383 SLAIAELEL--PAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNR-QQSDPAIKALNK 459 (527)
T ss_dssp TSBGGGGCC--CCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCC-CTTSBGGGGEET
T ss_pred CCcHHHhCc--CCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccC-cCCCcHHHHhcC
Confidence 456899998 789999999 9999999999999999999998 7899999999999755554333 336689999999
Q ss_pred CceeecCCCCHHHHHHHHHhCCCCEEEEECCC----CcEEEEEEhhHHHHHHHHHh
Q 021709 218 NPECATIDTPIVDALHIMHDGKFLHLPVVDRD----GDVVDVVDVIHITHAAVATV 269 (308)
Q Consensus 218 ~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~----~~~iGiit~~di~~~~~~~~ 269 (308)
++.++++++++.+++++|.++++ +||+|++ |+++||||+.||++++....
T Consensus 460 ~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~~ 513 (527)
T 3pc3_A 460 RVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAAGK 513 (527)
T ss_dssp TCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHTCC
T ss_pred CCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHhcc
Confidence 99999999999999999977665 7999974 99999999999999877544
No 97
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.59 E-value=6.1e-15 Score=116.59 Aligned_cols=128 Identities=15% Similarity=0.215 Sum_probs=103.5
Q ss_pred CCccccccccccc--CceEEeCCCcHHHHHHHhHhCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHH
Q 021709 37 NLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113 (308)
Q Consensus 37 ~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~ 113 (308)
.+...+++++|.+ +++++.+++++.+|++.|.+++++.+||+| +|+++|+++..|++......
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~-------------- 75 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGL-------------- 75 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCS--------------
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhh--------------
Confidence 4566799999988 899999999999999999999999999998 68999999999997542100
Q ss_pred hhhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeH
Q 021709 114 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTS 192 (308)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~ 192 (308)
... . .......++.++|. +++.++++++++.++++.|.++++ +||++ +|+++|+||.
T Consensus 76 ---------~~~-~--------~~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~ 133 (159)
T 1yav_A 76 ---------ERI-E--------FEKLDQITVEEVML--TDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTR 133 (159)
T ss_dssp ---------SSB-C--------GGGTTTSBHHHHSB--CSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEH
T ss_pred ---------ccc-c--------hhhhccCCHHHhcC--CCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEH
Confidence 000 0 00123456788887 689999999999999999998876 99999 8999999999
Q ss_pred HHHHHHHH
Q 021709 193 KDILMRVI 200 (308)
Q Consensus 193 ~dl~~~~~ 200 (308)
+|++..+.
T Consensus 134 ~dil~~~~ 141 (159)
T 1yav_A 134 RVVLKELN 141 (159)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99974443
No 98
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.58 E-value=1.3e-14 Score=134.19 Aligned_cols=120 Identities=22% Similarity=0.300 Sum_probs=107.8
Q ss_pred cCCCcccccCCCCceeEeCCCCcHHHHHHHHHHc-----CCcEEEEee-CCEEEEEeeHHHHHHHHHhcCCCcccccccc
Q 021709 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL-----RLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEK 213 (308)
Q Consensus 140 ~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~ 213 (308)
...+++++|. +++++++++.++.++++.|.+. +++++||+| +++++|++|.+|++.. ....++++
T Consensus 153 ~~~~v~~iM~--~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~-------~~~~~v~d 223 (473)
T 2zy9_A 153 EEDEAGGLMT--PEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA-------DPRTRVAE 223 (473)
T ss_dssp CTTBSTTTCB--SCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS-------CTTSBGGG
T ss_pred CCCCHHHhCC--CCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC-------CCCCcHHH
Confidence 4567899998 7899999999999999999986 478999999 8899999999999621 12568999
Q ss_pred ccccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHH
Q 021709 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (308)
Q Consensus 214 ~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~ 268 (308)
+|++++.++++++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+...
T Consensus 224 im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~e 278 (473)
T 2zy9_A 224 IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAE 278 (473)
T ss_dssp TSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHHH
T ss_pred HhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999987653
No 99
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.58 E-value=1.7e-14 Score=113.22 Aligned_cols=123 Identities=23% Similarity=0.298 Sum_probs=99.7
Q ss_pred CcccccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhh
Q 021709 38 LEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (308)
Q Consensus 38 ~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~ 116 (308)
+...+++++ ++++++.+++++.+|++.|.+++++.+||+| +|+++|+++..|+++.....
T Consensus 20 l~~~~v~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~----------------- 80 (152)
T 2uv4_A 20 LEELQIGTY--ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEK----------------- 80 (152)
T ss_dssp HHHHTCSBC--SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCS-----------------
T ss_pred HHHccCCcc--CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcch-----------------
Confidence 345567777 7889999999999999999999999999998 68999999999997542210
Q ss_pred hhhccCCCCCChhHHHHHHHHHhcCCCcccccCCC----CceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEee
Q 021709 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEK----SKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILT 191 (308)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt 191 (308)
.. .....++.++|... .++.++++++++.++++.|.+++.+.+||++ +|+++|++|
T Consensus 81 -----~~--------------~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit 141 (152)
T 2uv4_A 81 -----TY--------------NNLDVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVS 141 (152)
T ss_dssp -----SC--------------CCTTSBGGGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEE
T ss_pred -----hh--------------hhhcchHHHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEE
Confidence 00 00123466777421 4689999999999999999999999999999 799999999
Q ss_pred HHHHHHH
Q 021709 192 SKDILMR 198 (308)
Q Consensus 192 ~~dl~~~ 198 (308)
..|++..
T Consensus 142 ~~dil~~ 148 (152)
T 2uv4_A 142 LSDILQA 148 (152)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999743
No 100
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.56 E-value=1.7e-14 Score=125.16 Aligned_cols=120 Identities=14% Similarity=0.232 Sum_probs=105.3
Q ss_pred cCCcccccccccccCceEEeCCCcHHHHHHHhHhC-----CCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHH
Q 021709 36 LNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQG-----KFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKA 109 (308)
Q Consensus 36 ~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~-----~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~ 109 (308)
......+++++|.++++++++++++.+|++.|.++ +++.+||++ +|+++|+++..+++..
T Consensus 132 l~~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~-------------- 197 (286)
T 2oux_A 132 LHYEDETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVN-------------- 197 (286)
T ss_dssp TTSCTTBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTS--------------
T ss_pred hcCChHHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcC--------------
Confidence 35667799999999999999999999999999987 788999998 6999999999998632
Q ss_pred HHHHhhhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEE
Q 021709 110 IAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRG 188 (308)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~G 188 (308)
....++.++|. +++.++++++++.++++.|.+++.+++||++ +|+++|
T Consensus 198 -----------------------------~~~~~v~~im~--~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvG 246 (286)
T 2oux_A 198 -----------------------------DDDTLIADILN--ERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLG 246 (286)
T ss_dssp -----------------------------CTTSBHHHHSB--SCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEE
T ss_pred -----------------------------CCCCcHHHHcC--CCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEE
Confidence 12345778887 6799999999999999999999999999999 899999
Q ss_pred EeeHHHHHHHHH
Q 021709 189 ILTSKDILMRVI 200 (308)
Q Consensus 189 ivt~~dl~~~~~ 200 (308)
+||..|++..+.
T Consensus 247 iIT~~Dil~~i~ 258 (286)
T 2oux_A 247 IVTVDDIIDVID 258 (286)
T ss_dssp EEEHHHHHHHHH
T ss_pred EEEHHHHHHHHH
Confidence 999999975443
No 101
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.55 E-value=4.1e-14 Score=122.34 Aligned_cols=118 Identities=20% Similarity=0.236 Sum_probs=104.2
Q ss_pred CCcccccccccccCceEEeCCCcHHHHHHHhHhC-----CCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHH
Q 021709 37 NLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQG-----KFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAI 110 (308)
Q Consensus 37 ~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~-----~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~ 110 (308)
.....+++++|.++++++++++++.+|++.|.++ ++..+||++ +++++|+++..+++..
T Consensus 131 ~~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~--------------- 195 (278)
T 2yvy_A 131 RYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA--------------- 195 (278)
T ss_dssp HSCTTBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHS---------------
T ss_pred CCCcchHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcC---------------
Confidence 3456789999999999999999999999999987 789999998 6999999999998632
Q ss_pred HHHhhhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEE
Q 021709 111 AAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGI 189 (308)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Gi 189 (308)
....++.++|. ++++++++++++.++++.|.+++.+.+||++ +|+++|+
T Consensus 196 ----------------------------~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGi 245 (278)
T 2yvy_A 196 ----------------------------DPRTRVAEIMN--PKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGI 245 (278)
T ss_dssp ----------------------------CTTCBSTTTSB--SSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEE
T ss_pred ----------------------------CCCCcHHHHhC--CCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEE
Confidence 12346889997 6899999999999999999999999999999 8999999
Q ss_pred eeHHHHHHHH
Q 021709 190 LTSKDILMRV 199 (308)
Q Consensus 190 vt~~dl~~~~ 199 (308)
||..|++..+
T Consensus 246 vT~~Dil~~i 255 (278)
T 2yvy_A 246 VTVDDVLDVL 255 (278)
T ss_dssp EEHHHHHHHC
T ss_pred EEHHHHHHHH
Confidence 9999997443
No 102
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.55 E-value=2.3e-15 Score=144.09 Aligned_cols=122 Identities=11% Similarity=0.013 Sum_probs=102.6
Q ss_pred CCCcccccCCCCceeEeCCCCcHHHHHHHHH-HcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcCCC-------------
Q 021709 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKML-ELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLP------------- 205 (308)
Q Consensus 141 ~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~------------- 205 (308)
..+++++|.+++++.++++++++.++.+.|. +++++.+||+| +++++|+||.+|++ +.+.....
T Consensus 452 ~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~-~~l~~~~~~~~~~~~~~~~~~ 530 (632)
T 3org_A 452 EMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIV-DRLQHVLEDVPEPIAGHRTLV 530 (632)
T ss_dssp TSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHT-TTTTTC---------------
T ss_pred cCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHH-HHHHHHhhhccccccccccee
Confidence 3467899987778999999999999999999 79999999999 89999999999996 43322110
Q ss_pred ----------------------------------ccccccccccccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCc
Q 021709 206 ----------------------------------ADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGD 251 (308)
Q Consensus 206 ----------------------------------~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~ 251 (308)
....+++++|+++|.++++++++.++.++|.+++.+++||+ ++|+
T Consensus 531 ~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G~ 609 (632)
T 3org_A 531 LLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERGK 609 (632)
T ss_dssp ----------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETTE
T ss_pred ccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-ECCE
Confidence 00013778999999999999999999999999999999999 6899
Q ss_pred EEEEEEhhHHHHH
Q 021709 252 VVDVVDVIHITHA 264 (308)
Q Consensus 252 ~iGiit~~di~~~ 264 (308)
++|+||++||+++
T Consensus 610 lvGIVT~~Dll~~ 622 (632)
T 3org_A 610 LVGIVEREDVAYG 622 (632)
T ss_dssp EEEEEEGGGTEEC
T ss_pred EEEEEehhhHHHH
Confidence 9999999999864
No 103
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.51 E-value=8.8e-14 Score=129.49 Aligned_cols=116 Identities=25% Similarity=0.300 Sum_probs=103.7
Q ss_pred cccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee---CCEEEEEeeHHHHHHHHHhcCCCcccccccccccc-Cc
Q 021709 144 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV---ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP-NP 219 (308)
Q Consensus 144 v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~---~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~-~~ 219 (308)
..+.|. .++.+++++.++.+++++|.+++++.+||++ +++++|+||.+|+. . ......++.++|.+ ++
T Consensus 115 ~~~~m~--~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~-~-----~~~~~~~V~~vM~~~~~ 186 (511)
T 3usb_A 115 SESGVI--SDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR-F-----IQDYSIKISDVMTKEQL 186 (511)
T ss_dssp SSSCSS--SSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHT-T-----CCCSSSBHHHHCCCCCC
T ss_pred cccccc--cCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhh-h-----hccCCCcHHHhcccCCC
Confidence 445665 6899999999999999999999999999998 57999999999994 2 22235689999998 99
Q ss_pred eeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHH
Q 021709 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (308)
Q Consensus 220 ~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~ 267 (308)
.++++++++.+++++|.+++.+.+||||++|+++|+||.+||++.+..
T Consensus 187 vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 187 ITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp CCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred EEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhc
Confidence 999999999999999999999999999999999999999999997754
No 104
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.48 E-value=9.8e-15 Score=135.43 Aligned_cols=114 Identities=17% Similarity=0.183 Sum_probs=89.9
Q ss_pred cccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcCCCccccccccccc-c-Cce
Q 021709 144 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMT-P-NPE 220 (308)
Q Consensus 144 v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~-~-~~~ 220 (308)
..++|. .+++++++++++.+++++|.+++++.+||++ +++++|+||.+|+. .......++.++|. . ++.
T Consensus 91 ~~~~m~--~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~------~~~~~~~~v~diM~p~~~~v 162 (496)
T 4fxs_A 91 FEAGVV--THPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVR------FVTDLTKSVAAVMTPKERLA 162 (496)
T ss_dssp CCC--C--BCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHT------TCCCTTSBGGGTSEEGGGCC
T ss_pred cccccc--cCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHh------hcccCCCcHHHHhcCCCCCE
Confidence 567777 7899999999999999999999999999999 89999999999994 12233568999998 4 589
Q ss_pred eecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHH
Q 021709 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 265 (308)
Q Consensus 221 ~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~ 265 (308)
++++++++.+++++|.+++.+.+||||++|+++|+||.+||+++.
T Consensus 163 tv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 163 TVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp EEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----C
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhh
Confidence 999999999999999999999999999999999999999999864
No 105
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.47 E-value=6.1e-14 Score=131.74 Aligned_cols=122 Identities=12% Similarity=0.204 Sum_probs=103.1
Q ss_pred CcccccccccccCceEEeCC-CcHHHHHHHhHhCCCcEeeEee--CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHh
Q 021709 38 LEETPVSKVMTRNPTFVLSD-TLAVEALQKMVQGKFRHLPVVE--NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (308)
Q Consensus 38 ~~~~~v~~im~~~~~~v~~~-~~l~~a~~~m~~~~~~~~pVvd--~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~ 114 (308)
+...+++++|.++++++.++ +++.+|+++|.+++++++||+| +++++|+|+..|+++.....
T Consensus 381 l~~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~--------------- 445 (527)
T 3pc3_A 381 WWSLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSM--------------- 445 (527)
T ss_dssp TTTSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHH---------------
T ss_pred ccCCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhc---------------
Confidence 33578999999999999999 9999999999999999999998 68999999999998764321
Q ss_pred hhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEeeC-----CEEEEE
Q 021709 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE-----NKPRGI 189 (308)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~-----~~~~Gi 189 (308)
......++.++|. +++.++++++++.+++++|.++++ +||+++ |+++|+
T Consensus 446 ----------------------~~~~~~~V~~im~--~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGI 499 (527)
T 3pc3_A 446 ----------------------NRQQSDPAIKALN--KRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKAL 499 (527)
T ss_dssp ----------------------CCCTTSBGGGGEE--TTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEE
T ss_pred ----------------------cCcCCCcHHHHhc--CCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEE
Confidence 0122456899998 789999999999999999976554 789884 899999
Q ss_pred eeHHHHHHHHH
Q 021709 190 LTSKDILMRVI 200 (308)
Q Consensus 190 vt~~dl~~~~~ 200 (308)
||..|+++.+.
T Consensus 500 VT~~Dll~~l~ 510 (527)
T 3pc3_A 500 ATKLDVTTFIA 510 (527)
T ss_dssp EEHHHHHHHHH
T ss_pred EEHHHHHHHHH
Confidence 99999985544
No 106
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.45 E-value=5.1e-13 Score=123.61 Aligned_cols=120 Identities=20% Similarity=0.221 Sum_probs=105.2
Q ss_pred cCCcccccccccccCceEEeCCCcHHHHHHHhHhC-----CCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHH
Q 021709 36 LNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQG-----KFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKA 109 (308)
Q Consensus 36 ~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~-----~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~ 109 (308)
....+.+++++|.++++++++++++.+|++.|.++ ++.++||+| +++++|+++.+|++..
T Consensus 150 l~~~~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~-------------- 215 (473)
T 2zy9_A 150 ARYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA-------------- 215 (473)
T ss_dssp HTSCTTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS--------------
T ss_pred hcCCCCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC--------------
Confidence 34556789999999999999999999999999986 589999998 6899999999998732
Q ss_pred HHHHhhhhhhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEE
Q 021709 110 IAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRG 188 (308)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~G 188 (308)
....++.++|. +++.++++++++.++++.|.+++.+.+||+| +|+++|
T Consensus 216 -----------------------------~~~~~v~dim~--~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvG 264 (473)
T 2zy9_A 216 -----------------------------DPRTRVAEIMN--PKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVG 264 (473)
T ss_dssp -----------------------------CTTSBGGGTSB--SSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEE
T ss_pred -----------------------------CCCCcHHHHhC--CCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEE
Confidence 12346899997 6899999999999999999999999999999 899999
Q ss_pred EeeHHHHHHHHH
Q 021709 189 ILTSKDILMRVI 200 (308)
Q Consensus 189 ivt~~dl~~~~~ 200 (308)
+||..|++..+.
T Consensus 265 iIT~~Dil~~i~ 276 (473)
T 2zy9_A 265 IVTVDDVLDVLE 276 (473)
T ss_dssp EEEHHHHHHHHH
T ss_pred EEehHhhHHHHH
Confidence 999999985443
No 107
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.44 E-value=1.1e-12 Score=122.28 Aligned_cols=116 Identities=21% Similarity=0.296 Sum_probs=104.1
Q ss_pred cccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee---CCEEEEEeeHHHHHHHHHhcCCCcccccccccccc-Cc
Q 021709 144 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV---ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP-NP 219 (308)
Q Consensus 144 v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~---~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~-~~ 219 (308)
+.++|. .++.+++++.++.++++.|.+++++.+||++ +++++|+||.+|++ .. .....++.++|.+ ++
T Consensus 92 ~~~im~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~-~~-----~~~~~~v~~im~~~~~ 163 (491)
T 1zfj_A 92 SENGVI--IDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMR-FI-----SDYNAPISEHMTSEHL 163 (491)
T ss_dssp HTTTTS--SSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHH-HC-----SCSSSBTTTSCCCSCC
T ss_pred HHhcCc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHh-hh-----ccCCCcHHHHcCCCCC
Confidence 366787 6899999999999999999999999999997 68999999999995 32 1235689999998 89
Q ss_pred eeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHH
Q 021709 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (308)
Q Consensus 220 ~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~ 267 (308)
.++++++++.++++.|.+++.+.+||+|++|+++|+||..||++.+..
T Consensus 164 ~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 164 VTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp CCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred EEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999997764
No 108
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.43 E-value=5.9e-15 Score=134.25 Aligned_cols=137 Identities=20% Similarity=0.208 Sum_probs=10.0
Q ss_pred cCCCCCChhHHHHHHHHHhcC-CCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee----CCEEEEEeeHHHH
Q 021709 121 WGTSISGPNTFIETLRERMFR-PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV----ENKPRGILTSKDI 195 (308)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~----~~~~~Givt~~dl 195 (308)
-|..++|.+...+.......+ ...+..|. .+++++.|+.++.+++++|.+++++.+||++ +++++|+||.+|+
T Consensus 116 GGiGvIH~n~sie~Qa~~V~~VKr~e~g~i--~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~ 193 (556)
T 4af0_A 116 GGLGIIHHNCSAEEQAAMVRRVKKYENGFI--TDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDV 193 (556)
T ss_dssp TCEEEECCSSCHHHHHHHHHHHHHCCC-----------------------------------------------------
T ss_pred CCeEEEcCCCCHHHHHHHHHHHHhcccCcc--CCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEecccc
Confidence 366666665433333221111 11233343 5799999999999999999999999999998 3689999999999
Q ss_pred HHHHHhcCCCccccccccccccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHH
Q 021709 196 LMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (308)
Q Consensus 196 ~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~ 266 (308)
. . .+ ...+++++|++++.+++...+++++.++|.++++..+||||++|+++|+||.+|+.+...
T Consensus 194 r-f-----~d-~~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~ 257 (556)
T 4af0_A 194 Q-F-----QD-AETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQN 257 (556)
T ss_dssp -----------------------------------------------------------------------
T ss_pred c-c-----cc-cceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhh
Confidence 3 2 12 256899999999999999999999999999999999999999999999999999998553
No 109
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.42 E-value=7.5e-15 Score=136.81 Aligned_cols=115 Identities=22% Similarity=0.199 Sum_probs=0.8
Q ss_pred cCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-C---CEEEEEeeHHHHHHHHHhcCCCccccccccccccC--cee
Q 021709 148 IPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E---NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPN--PEC 221 (308)
Q Consensus 148 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~---~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~~--~~~ 221 (308)
|. ++++++++++++.+++++|.+++++.+||++ + ++++|+||.+|++ .. ......++.++|.++ +.+
T Consensus 103 M~--~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~-~~----~~~~~~~V~diM~~~~~~~t 175 (503)
T 1me8_A 103 FV--VSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYP-ID----LTQTETKVSDMMTPFSKLVT 175 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cc--cCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHH-hh----hccccCcHHHHhCCCCCCEE
Confidence 66 6899999999999999999999999999999 5 8999999999995 32 122356899999987 999
Q ss_pred ecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHHHh
Q 021709 222 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (308)
Q Consensus 222 v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~~~ 269 (308)
+++++++.+++++|.+++.+.+||+|++|+++|+||.+||++++....
T Consensus 176 v~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~~ 223 (503)
T 1me8_A 176 AHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCHN 223 (503)
T ss_dssp ----------------------------------------------CC
T ss_pred EcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhccc
Confidence 999999999999999999999999999999999999999999876443
No 110
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.42 E-value=1.4e-13 Score=131.78 Aligned_cols=156 Identities=13% Similarity=0.092 Sum_probs=102.2
Q ss_pred cccccccccc--cCceEEeCCCcHHHHHHHhH-hCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHH---
Q 021709 39 EETPVSKVMT--RNPTFVLSDTLAVEALQKMV-QGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIA--- 111 (308)
Q Consensus 39 ~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~-~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~--- 111 (308)
.+.+++++|. ++++++++++++.++.+.|. +++++++||+| +++++|+++.+|+.+..........+......
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~ 530 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLV 530 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC---------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHHhhhccccccccccee
Confidence 5678999999 89999999999999999999 79999999998 68999999999998653321110000000000
Q ss_pred -HHhhhhhhccCCCC-CChh----HHHHHHHHH-hcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEeeCC
Q 021709 112 -AAVEGVEKHWGTSI-SGPN----TFIETLRER-MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVEN 184 (308)
Q Consensus 112 -~~~~~~~~~~~~~~-~~~~----~~~~~~~~~-~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~~ 184 (308)
.......+...... ..+. ..-+..... ....++.++|+ +++.++++++++.++.+.|.+++.+++||+++|
T Consensus 531 ~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt--~~pitV~~~~~l~ea~~~M~~~~i~~lpVve~G 608 (632)
T 3org_A 531 LLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCD--VSPIVVTSYSLVRQLHFLFVMLMPSMIYVTERG 608 (632)
T ss_dssp ----------------------------------------CCSCC--CCCCEEETTCBHHHHHHHHHHTCCSEEEEEETT
T ss_pred ccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhc--CCCceecCCCcHHHHHHHHHhcCCCEEEEEECC
Confidence 00000000000000 0000 000000000 01124788998 789999999999999999999999999999999
Q ss_pred EEEEEeeHHHHH
Q 021709 185 KPRGILTSKDIL 196 (308)
Q Consensus 185 ~~~Givt~~dl~ 196 (308)
+++|+||.+|++
T Consensus 609 ~lvGIVT~~Dll 620 (632)
T 3org_A 609 KLVGIVEREDVA 620 (632)
T ss_dssp EEEEEEEGGGTE
T ss_pred EEEEEEehhhHH
Confidence 999999999996
No 111
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.41 E-value=1.8e-14 Score=133.55 Aligned_cols=115 Identities=22% Similarity=0.250 Sum_probs=1.9
Q ss_pred cccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEeeCCEEEEEeeHHHHHHHHHhcCCCccccccccccc-c-Ccee
Q 021709 144 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMT-P-NPEC 221 (308)
Q Consensus 144 v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~-~-~~~~ 221 (308)
+.++|. .++.+++++.++.+++++|.+++++.+||+++++++|+||.+|+. .. .....++.++|. + ++.+
T Consensus 90 ~~~~m~--~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd~g~lvGIVt~rDl~-~~-----~~~~~~V~~vMtp~~~~vt 161 (490)
T 4avf_A 90 HETAIV--RDPVTVTPSTKIIELLQMAREYGFSGFPVVEQGELVGIVTGRDLR-VK-----PNAGDTVAAIMTPKDKLVT 161 (490)
T ss_dssp CCC-----------------------------------------------------------------------------
T ss_pred cccCcc--cCceEeCCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEhHHhh-hc-----cccCCcHHHHhccCCCCEE
Confidence 567776 678999999999999999999999999999988999999999994 22 122568999998 4 6999
Q ss_pred ecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHH
Q 021709 222 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (308)
Q Consensus 222 v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~ 266 (308)
+++++++.+++++|.+++.+.+||+|++|+++|+||++||+++..
T Consensus 162 v~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 162 AREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp ---------------------------------------------
T ss_pred ECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 999999999999999999999999999999999999999998654
No 112
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.41 E-value=2.1e-12 Score=109.32 Aligned_cols=167 Identities=17% Similarity=0.187 Sum_probs=107.4
Q ss_pred CCCCCcCEEEEECCCCcEEEEEehhHHHHHHHHhccC-------------------------------C--------ccc
Q 021709 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELN-------------------------------L--------EET 41 (308)
Q Consensus 1 m~~~~~~~~~V~~~~~~~~Giit~~D~~~~~~~~~~~-------------------------------~--------~~~ 41 (308)
|.+++++.+||+|++|+++|++|..|+++.+...... . ...
T Consensus 33 m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~ 112 (245)
T 3l2b_A 33 MRDKNLKSIPVADGNNHLLGMLSTSNITATYMDIWDSNILAKSATSLDNILDTLSAEAQNINEERKVFPGKVVVAAMQAE 112 (245)
T ss_dssp HHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHHHHHTTCEEEECCTTCCCCCSCEEECCSCGG
T ss_pred HHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHHHHHhCCEEEeccCCcceeeeeEEEEeCChH
Confidence 5678999999999889999999999999665432100 0 000
Q ss_pred ccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEeeCCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhhcc
Q 021709 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHW 121 (308)
Q Consensus 42 ~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (308)
.+.+.+.++.+.+-.+ -.++...+.+.+...+++..+..+. .++... .. +..
T Consensus 113 ~~~~~~~~~~ivIvgd--r~~~~~~~i~~~~~~liit~~~~~~-----~~v~~~-a~--------------------~~~ 164 (245)
T 3l2b_A 113 SLKEFISEGDIAIAGD--RAEIQAELIELKVSLLIVTGGHTPS-----KEIIEL-AK--------------------KNN 164 (245)
T ss_dssp GGGGTCCTTCEEEECS--CHHHHHHHHHTTCSEEEECTTCCCC-----HHHHHH-HH--------------------HHT
T ss_pred HHHhcCCCCCEEEECC--CHHHHHHHHHcCCCEEEECCCCCCC-----HHHHHH-HH--------------------HcC
Confidence 1122222333333322 3677778888888888777532211 111110 00 000
Q ss_pred CCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHH
Q 021709 122 GTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL 196 (308)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~ 196 (308)
......+...+..........++.++|.+ +++.++++++++.+++++|.+++++++||+| +|+++|++|.+|++
T Consensus 165 ~~~i~t~~d~~~~~~~~~~~~~v~~im~~-~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dll 239 (245)
T 3l2b_A 165 ITVITTPHDSFTASRLIVQSLPVDYVMTK-DNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLI 239 (245)
T ss_dssp CEEEECSSCHHHHHHHGGGGSBHHHHSBC-TTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC---
T ss_pred CeEEEeCCChHHHHHHHhcCCceeeEecC-CccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHhh
Confidence 11122233333444445556779999975 6899999999999999999999999999999 89999999999997
No 113
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.38 E-value=1.6e-12 Score=87.61 Aligned_cols=69 Identities=30% Similarity=0.415 Sum_probs=63.2
Q ss_pred eeEeCCCCcHHHHHHHHHHcCCcEEEEeeCCEEEEEeeHHHHHHHHHhcCCCccccccccccccCceee
Q 021709 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 222 (308)
Q Consensus 154 ~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~~~~~v 222 (308)
++++++++++.+|+++|.+++++++||+++|+++|++|.+|+++++.+.+..+...+++++|+++|.++
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 689999999999999999999999999999999999999999877777777777789999999988764
No 114
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.38 E-value=4.4e-14 Score=131.77 Aligned_cols=116 Identities=25% Similarity=0.330 Sum_probs=5.8
Q ss_pred cccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHhcCCCcccccccccccc--Cce
Q 021709 144 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP--NPE 220 (308)
Q Consensus 144 v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~--~~~ 220 (308)
+.++|. +++.++.+++++.++++.|.+++++.+||++ +++++|+||.+|+. .. . ....++.++|.+ ++.
T Consensus 97 ~~~iM~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~-~~--~---~~~~~v~~im~~~~~~~ 168 (494)
T 1vrd_A 97 TENGII--YDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVR-FE--K---NLSKKIKDLMTPREKLI 168 (494)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred HhhcCc--cCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHH-hh--c---CCCCcHHHHhCCCCCCe
Confidence 567787 6899999999999999999999999999999 78999999999995 32 1 125689999998 999
Q ss_pred eecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHH
Q 021709 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (308)
Q Consensus 221 ~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~ 267 (308)
++++++++.+++++|.+++.+.+||+|++|+++|+||..||++++..
T Consensus 169 ~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~ 215 (494)
T 1vrd_A 169 VAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEH 215 (494)
T ss_dssp ----------------------------------------CHHHHTC
T ss_pred EECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhcc
Confidence 99999999999999999999999999999999999999999997654
No 115
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.37 E-value=5.5e-12 Score=117.42 Aligned_cols=159 Identities=11% Similarity=0.155 Sum_probs=121.0
Q ss_pred cccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEee---CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhh
Q 021709 43 VSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE---NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119 (308)
Q Consensus 43 v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd---~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (308)
.++.|.++++++++++++.+++++|.+++++++||+| +++++|+|+.+|+...
T Consensus 115 ~~~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~------------------------ 170 (511)
T 3usb_A 115 SESGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFI------------------------ 170 (511)
T ss_dssp SSSCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTC------------------------
T ss_pred cccccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhh------------------------
Confidence 4566778899999999999999999999999999998 5799999999998521
Q ss_pred ccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHH
Q 021709 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMR 198 (308)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~ 198 (308)
.....++.++|.+ .+++++++++++.+++++|.+++.+.+||+| +|+++|++|..|+++.
T Consensus 171 ------------------~~~~~~V~~vM~~-~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~ 231 (511)
T 3usb_A 171 ------------------QDYSIKISDVMTK-EQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKV 231 (511)
T ss_dssp ------------------CCSSSBHHHHCCC-CCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHH
T ss_pred ------------------ccCCCcHHHhccc-CCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHh
Confidence 0124457888873 3899999999999999999999999999999 9999999999999744
Q ss_pred HHhcCCCccccccccccccCce--eecCCCCHHHHHHHHHhCCCCEEEEECCCC
Q 021709 199 VISQNLPADSTLVEKVMTPNPE--CATIDTPIVDALHIMHDGKFLHLPVVDRDG 250 (308)
Q Consensus 199 ~~~~~~~~~~~~v~~~~~~~~~--~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~ 250 (308)
.... . ...+.+.+.+. .+.......+.++.+.+.+...++|-..++
T Consensus 232 ~~~p-~-----a~~D~~~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g 279 (511)
T 3usb_A 232 IEFP-N-----SAKDKQGRLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHG 279 (511)
T ss_dssp HHCT-T-----CCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCT
T ss_pred hhcc-c-----chhhhccceeeeeeeeeccchHHHHHHHHhhccceEEeccccc
Confidence 4321 1 12222222222 232333445556678888998887765554
No 116
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.35 E-value=1.1e-13 Score=129.00 Aligned_cols=165 Identities=15% Similarity=0.096 Sum_probs=24.1
Q ss_pred ccc-cccCceEEeCCCcHHHHHHHhHhCCCcEeeEeeC----CeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhh
Q 021709 44 SKV-MTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN----GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (308)
Q Consensus 44 ~~i-m~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~----~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (308)
.+. |.++++++++++++.+|+++|.+++++++||+|+ ++++|+|+..|++.. .
T Consensus 99 ~e~gM~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~--~-------------------- 156 (503)
T 1me8_A 99 FKAGFVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID--L-------------------- 156 (503)
T ss_dssp TTC-----------------------------------------------------------------------------
T ss_pred cccCcccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh--h--------------------
Confidence 344 8889999999999999999999999999999984 799999999998642 0
Q ss_pred hccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHH
Q 021709 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 197 (308)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~ 197 (308)
.....++.++|.+..+++++++++++.+++++|.+++.+.+||+| +|+++|+||.+|+++
T Consensus 157 -------------------~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~ 217 (503)
T 1me8_A 157 -------------------TQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDR 217 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------ccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHH
Confidence 012235788887323499999999999999999999999999999 899999999999974
Q ss_pred HHHhcCCCccccccccccccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEE
Q 021709 198 RVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVD 254 (308)
Q Consensus 198 ~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iG 254 (308)
... ..... ..+...++. ...+.. ....+.++.|.+.+.+.++|-..+|...|
T Consensus 218 ~~~-~~~~~-~d~~~~l~v--~a~v~~-~~~~e~~~~l~e~gv~~l~Vd~~~g~~~~ 269 (503)
T 1me8_A 218 SQV-CHNEL-VDSQKRYLV--GAGINT-RDFRERVPALVEAGADVLCIDSSDGFSEW 269 (503)
T ss_dssp -----CCCC-BCTTSCBCC--EEEECS-SSHHHHHHHHHHHTCSEEEECCSCCCSHH
T ss_pred hhh-cccch-hcccccccc--ccccCc-hhHHHHHHHHHhhhccceEEecccCcccc
Confidence 443 22211 112222221 122334 55566678888888887766333344333
No 117
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.28 E-value=5.3e-12 Score=117.13 Aligned_cols=113 Identities=19% Similarity=0.284 Sum_probs=88.1
Q ss_pred ccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhhc
Q 021709 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120 (308)
Q Consensus 42 ~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (308)
.++++|..+++++++++++.+++++|.+++++++||+| +++++|+|+.+|+...
T Consensus 90 ~~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~------------------------- 144 (496)
T 4fxs_A 90 IFEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFV------------------------- 144 (496)
T ss_dssp HCCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTC-------------------------
T ss_pred ccccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhc-------------------------
Confidence 45678889999999999999999999999999999998 6899999999998511
Q ss_pred cCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHH
Q 021709 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL 196 (308)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~ 196 (308)
.....++.++|.+.++++++++++++.+++++|.+++.+.+||+| +|+++|+||..|++
T Consensus 145 -----------------~~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl 204 (496)
T 4fxs_A 145 -----------------TDLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFH 204 (496)
T ss_dssp -----------------CCTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC---
T ss_pred -----------------ccCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHH
Confidence 012346889997334799999999999999999999999999999 89999999999997
No 118
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.26 E-value=2.7e-12 Score=118.97 Aligned_cols=115 Identities=24% Similarity=0.298 Sum_probs=2.7
Q ss_pred ccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEeeCCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhhcc
Q 021709 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHW 121 (308)
Q Consensus 42 ~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (308)
.++++|.++++++++++++.+|+++|.+++++.+||+|+++++|+|+.+|+....
T Consensus 89 ~~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd~g~lvGIVt~rDl~~~~------------------------- 143 (490)
T 4avf_A 89 KHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVEQGELVGIVTGRDLRVKP------------------------- 143 (490)
T ss_dssp HCCC----------------------------------------------------------------------------
T ss_pred ccccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEhHHhhhcc-------------------------
Confidence 4678898999999999999999999999999999999999999999999985210
Q ss_pred CCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHH
Q 021709 122 GTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMR 198 (308)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~ 198 (308)
....++.++|.++.+++++++++++.+++++|.+++.+.+||+| +++++|+||..|+++.
T Consensus 144 -----------------~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~ 204 (490)
T 4avf_A 144 -----------------NAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKA 204 (490)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred -----------------ccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhh
Confidence 11235788886323799999999999999999999999999999 8999999999999733
No 119
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.23 E-value=8.5e-13 Score=122.62 Aligned_cols=111 Identities=29% Similarity=0.408 Sum_probs=0.5
Q ss_pred ccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEeeCCEEEEEeeHHHHHHHHHhcCCCccccccccccccCceeecC
Q 021709 145 STIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATI 224 (308)
Q Consensus 145 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~~~~~v~~ 224 (308)
.+.|. .++.+++++.++.++++.|.+++++.+||+++++++|+||.+|++ . . ...++.++|.+++.++++
T Consensus 96 ~~~m~--~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~~~lvGivt~~Dl~-~------~-~~~~v~~im~~~~~~v~~ 165 (486)
T 2cu0_A 96 ERLIV--EDVITIAPDETVDFALFLMEKHGIDGLPVVEDEKVVGIITKKDIA-A------R-EGKLVKELMTKEVITVPE 165 (486)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred hhccc--cCceEECCCCCHHHHHHHHHHcCCcEEEEEECCEEEEEEEHHHhc-c------C-CCCCHHHHccCCCeEECC
Confidence 45666 689999999999999999999999999999888999999999995 2 1 256899999989999999
Q ss_pred CCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHH
Q 021709 225 DTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 265 (308)
Q Consensus 225 ~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~ 265 (308)
++++.+++++|.+++.+.+||+|++|+++|+||..||++..
T Consensus 166 ~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~ 206 (486)
T 2cu0_A 166 SIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARK 206 (486)
T ss_dssp -----------------------------------------
T ss_pred cCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhh
Confidence 99999999999999999999999999999999999999874
No 120
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.22 E-value=2.6e-13 Score=127.10 Aligned_cols=118 Identities=24% Similarity=0.292 Sum_probs=70.4
Q ss_pred CcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEeeC----CEEEEEeeHHHHHHHHHhcCCCcccccccccccc-
Q 021709 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE----NKPRGILTSKDILMRVISQNLPADSTLVEKVMTP- 217 (308)
Q Consensus 143 ~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~----~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~- 217 (308)
.+.++|. +++.++.++.++.+++++|.+++++.+||+++ ++++|+||.+|+. .... .....++.++|.+
T Consensus 109 ~~~~im~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~-~~~~---~~~~~~v~~vm~~~ 182 (514)
T 1jcn_A 109 NFEQGFI--TDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDID-FLAE---KDHTTLLSEVMTPR 182 (514)
T ss_dssp TCCTTSC--SSCCCCCC-----------------CEESCC--------CCEECTTTTC--------------------CC
T ss_pred hhhhccc--cCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHH-hhhh---ccCCCCHHHHhCCC
Confidence 4678887 67899999999999999999999999999984 7999999999994 3211 1225689999998
Q ss_pred -CceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHH
Q 021709 218 -NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (308)
Q Consensus 218 -~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~ 266 (308)
++.++++++++.+++++|.+++.+.+||||++|+++|+||+.||++++.
T Consensus 183 ~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 232 (514)
T 1jcn_A 183 IELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNRD 232 (514)
T ss_dssp BCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCCC
T ss_pred CCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999997543
No 121
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.21 E-value=8.2e-11 Score=109.59 Aligned_cols=114 Identities=18% Similarity=0.261 Sum_probs=100.5
Q ss_pred cccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEee---CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhh
Q 021709 43 VSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE---NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119 (308)
Q Consensus 43 v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd---~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (308)
++++|.++++++++++++.++++.|.++++.++||++ +++++|+|+.+|++..
T Consensus 92 ~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~------------------------ 147 (491)
T 1zfj_A 92 SENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFI------------------------ 147 (491)
T ss_dssp HTTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHC------------------------
T ss_pred HHhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhh------------------------
Confidence 5789999999999999999999999999999999997 5899999999998632
Q ss_pred ccCCCCCChhHHHHHHHHHhcCCCcccccCCCC-ceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHH
Q 021709 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKS-KVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 197 (308)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~ 197 (308)
.....++.++|. + ++.++++++++.++++.|.+++.+.+||++ +++++|++|..|+++
T Consensus 148 ------------------~~~~~~v~~im~--~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~ 207 (491)
T 1zfj_A 148 ------------------SDYNAPISEHMT--SEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEK 207 (491)
T ss_dssp ------------------SCSSSBTTTSCC--CSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHH
T ss_pred ------------------ccCCCcHHHHcC--CCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHH
Confidence 012346888997 5 789999999999999999999999999999 899999999999974
Q ss_pred HHH
Q 021709 198 RVI 200 (308)
Q Consensus 198 ~~~ 200 (308)
.+.
T Consensus 208 ~~~ 210 (491)
T 1zfj_A 208 VIE 210 (491)
T ss_dssp HHH
T ss_pred HHh
Confidence 443
No 122
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.15 E-value=1.9e-11 Score=113.88 Aligned_cols=158 Identities=17% Similarity=0.277 Sum_probs=19.5
Q ss_pred ccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEee-CCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhhc
Q 021709 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120 (308)
Q Consensus 42 ~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (308)
.++++|.++++++++++++.+|+++|.++++..+||+| +++++|+|+..|+.+..
T Consensus 96 ~~~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~~------------------------ 151 (494)
T 1vrd_A 96 KTENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFEK------------------------ 151 (494)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred hHhhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhhc------------------------
Confidence 45788999999999999999999999999999999998 68999999999986310
Q ss_pred cCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHH
Q 021709 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRV 199 (308)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~ 199 (308)
....++.++|.+..++.++++++++.+++++|.+++.+.+||+| +++++|++|..|+++.
T Consensus 152 ------------------~~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~- 212 (494)
T 1vrd_A 152 ------------------NLSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSV- 212 (494)
T ss_dssp ---------------------------------------------------------------------------CHHH-
T ss_pred ------------------CCCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhh-
Confidence 01234778887223899999999999999999999999999999 8999999999999744
Q ss_pred HhcCCCccccccccccccCceeecCCCCHHHHHHHHHhCCCCEEEE
Q 021709 200 ISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPV 245 (308)
Q Consensus 200 ~~~~~~~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~V 245 (308)
+.......+. -..++. -.-+.......+.+..+.+.+...+.+
T Consensus 213 ~~~~~~~~D~-~~~l~v--ga~ig~~~~~~~~a~~l~~aGvd~v~i 255 (494)
T 1vrd_A 213 IEHPNAARDE-KGRLLV--GAAVGTSPETMERVEKLVKAGVDVIVI 255 (494)
T ss_dssp HTCTTCCBCT-TSCBCC--EEEECSSTTHHHHHHHHHHTTCSEEEE
T ss_pred hccccccccc-hhhhcc--ccccCcCHhHHHHHHHHHHhCCCEEEE
Confidence 3221110000 000000 001122244556666677777766654
No 123
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.13 E-value=1.9e-11 Score=111.47 Aligned_cols=107 Identities=14% Similarity=0.204 Sum_probs=0.4
Q ss_pred cccccCceEEeCCCcHHHHHHHhHhCCCcEeeEeeC----CeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhhc
Q 021709 45 KVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN----GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120 (308)
Q Consensus 45 ~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~----~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (308)
..|..+++++.|+.++.+|+.+|.++++..+||+++ ++++|+++.+|+...
T Consensus 142 ~g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~------------------------- 196 (556)
T 4af0_A 142 NGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ------------------------- 196 (556)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred cCccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc-------------------------
Confidence 346678999999999999999999999999999974 689999999997311
Q ss_pred cCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHH
Q 021709 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL 196 (308)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~ 196 (308)
....++.++|+ +++++++++.++++|.++|.++++..+||+| +++++|+||.+|+.
T Consensus 197 ------------------d~~~~V~evMT--~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~ 253 (556)
T 4af0_A 197 ------------------DAETPIKSVMT--TEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLL 253 (556)
T ss_dssp -----------------------------------------------------------------------------
T ss_pred ------------------ccceEhhhhcc--cceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhh
Confidence 11235889998 6799999999999999999999999999999 99999999999996
No 124
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.11 E-value=1.4e-11 Score=114.42 Aligned_cols=162 Identities=15% Similarity=0.147 Sum_probs=22.6
Q ss_pred cccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEeeCCeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhhccC
Q 021709 43 VSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWG 122 (308)
Q Consensus 43 v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (308)
+.+.|..+++++++++++.+++++|.++++.++||+++++++|+|+.+|++..
T Consensus 95 ~~~~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~~~lvGivt~~Dl~~~--------------------------- 147 (486)
T 2cu0_A 95 AERLIVEDVITIAPDETVDFALFLMEKHGIDGLPVVEDEKVVGIITKKDIAAR--------------------------- 147 (486)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred hhhccccCceEECCCCCHHHHHHHHHHcCCcEEEEEECCEEEEEEEHHHhccC---------------------------
Confidence 35578889999999999999999999999999999988999999999998630
Q ss_pred CCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHHHHHHh
Q 021709 123 TSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVIS 201 (308)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~ 201 (308)
...++.++|. +++.++++++++.++++.|.+++.+.+||++ +++++|++|.+|++ +...
T Consensus 148 -----------------~~~~v~~im~--~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil-~~~~ 207 (486)
T 2cu0_A 148 -----------------EGKLVKELMT--KEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLV-ARKK 207 (486)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -----------------CCCCHHHHcc--CCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHH-Hhhh
Confidence 0123677786 5789999999999999999999999999999 89999999999996 4432
Q ss_pred cCCCccccccccccccCceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEE
Q 021709 202 QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 256 (308)
Q Consensus 202 ~~~~~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGii 256 (308)
..... ......++.. ..+..++ .+.+..+...+...++|-...|...+++
T Consensus 208 ~~~~~-~~~~g~~~v~--~~~~~~~--~~~a~~l~~~gvd~lvvdta~G~~~~~L 257 (486)
T 2cu0_A 208 YKNAV-RDENGELLVA--AAVSPFD--IKRAIELDKAGVDVIVVDTAHAHNLKAI 257 (486)
T ss_dssp CTTCC-BCTTSCBCCE--EEECTTC--HHHHHHHHHTTCSEEEEECSCCCCHHHH
T ss_pred ccccc-cccCCceeec--ceechhh--HHHHHHHHHhcCCceEEEecCCcEeehh
Confidence 11100 0001111111 1122233 4556778888888765443456554444
No 125
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=99.02 E-value=1.4e-09 Score=73.06 Aligned_cols=69 Identities=30% Similarity=0.415 Sum_probs=57.9
Q ss_pred eeEeCCCCcHHHHHHHHHHcCCcEEEEeeCCEEEEEeeHHHHHHHHHhcCCCccccccccccccCceee
Q 021709 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 222 (308)
Q Consensus 154 ~~~v~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~~~~~~~~v 222 (308)
+.++++++++.++++.|.+++++++||+++++++|++|.+|+++.+...+......+++++|++++.++
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~v 70 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCCeEC
Confidence 678999999999999999999999999999999999999999754444444344678999998877653
No 126
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.00 E-value=2.6e-11 Score=113.48 Aligned_cols=115 Identities=11% Similarity=0.189 Sum_probs=67.4
Q ss_pred ccccccccCceEEeCCCcHHHHHHHhHhCCCcEeeEeeC----CeEEEEEeHHHHHHHHHHHHHHHHHhHHHHHHHhhhh
Q 021709 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN----GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGV 117 (308)
Q Consensus 42 ~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~----~~~vGivs~~dll~~~~~~~~~~~~~~~~~~~~~~~~ 117 (308)
+++++|.++++++.+++++.+|+++|.+++++.+||+|+ ++++|+|+..|+.... .
T Consensus 109 ~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~-~------------------- 168 (514)
T 1jcn_A 109 NFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLA-E------------------- 168 (514)
T ss_dssp TCCTTSCSSCCCCCC-----------------CEESCC--------CCEECTTTTC------------------------
T ss_pred hhhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhh-h-------------------
Confidence 577889999999999999999999999999999999985 7999999999985320 0
Q ss_pred hhccCCCCCChhHHHHHHHHHhcCCCcccccCCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEee-CCEEEEEeeHHHHH
Q 021709 118 EKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL 196 (308)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~ 196 (308)
.....++.++|.+..++.++++++++.+++++|.+++.+.+||+| +|+++|++|.+|++
T Consensus 169 --------------------~~~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll 228 (514)
T 1jcn_A 169 --------------------KDHTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLK 228 (514)
T ss_dssp --------------------------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCS
T ss_pred --------------------ccCCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHH
Confidence 012235778887222899999999999999999999999999999 89999999999996
No 127
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.95 E-value=4.7e-10 Score=75.40 Aligned_cols=46 Identities=13% Similarity=0.138 Sum_probs=43.2
Q ss_pred CceEEeCCCcHHHHHHHhHhCCCcEeeEeeCCeEEEEEeHHHHHHH
Q 021709 50 NPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYD 95 (308)
Q Consensus 50 ~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~vGivs~~dll~~ 95 (308)
+++++++++++.+|+++|.++++.++||+|+|+++|++|.+|+++.
T Consensus 1 k~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~~~lvGIvT~~Di~~~ 46 (70)
T 3ghd_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDK 46 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHH
T ss_pred CCEEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHH
Confidence 3679999999999999999999999999999999999999999865
No 128
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.58 E-value=1.3e-07 Score=63.08 Aligned_cols=48 Identities=17% Similarity=0.149 Sum_probs=44.0
Q ss_pred ceeecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHHHHHHH
Q 021709 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (308)
Q Consensus 219 ~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~~~~~~ 267 (308)
+.++++++++.++++.|.+++++++||+|+ |+++|+||..||++++..
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~ 49 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVA 49 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTT
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 568899999999999999999999999997 999999999999986543
No 129
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=63.81 E-value=20 Score=23.68 Aligned_cols=34 Identities=26% Similarity=0.338 Sum_probs=26.0
Q ss_pred CcCEEEEECCCCcEEEEEehhHHHHHHHHhccCC
Q 021709 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNL 38 (308)
Q Consensus 5 ~~~~~~V~~~~~~~~Giit~~D~~~~~~~~~~~~ 38 (308)
+.+.+-+++.+|..+|+++..+-++.+-....++
T Consensus 12 r~~eVrli~~~Ge~lGv~~~~eAl~~A~e~~LDL 45 (78)
T 1tif_A 12 RAREVRLIDQNGDQLGIKSKQEALEIAARRNLDL 45 (78)
T ss_dssp CCSEEEEECTTSCEEEEEEHHHHHHHHHHTTCEE
T ss_pred CCCEEEEECCCCcCCCcccHHHHHHHHHHcCCCE
Confidence 4566889999999999999999986554444443
No 130
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=57.49 E-value=20 Score=23.64 Aligned_cols=28 Identities=14% Similarity=0.278 Sum_probs=22.7
Q ss_pred CCCEEEEECCCCcEEEEEEhhHHHHHHH
Q 021709 239 KFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (308)
Q Consensus 239 ~~~~l~Vvd~~~~~iGiit~~di~~~~~ 266 (308)
..+.+=++|++|..+|+++..+-++..-
T Consensus 12 r~~eVrli~~~Ge~lGv~~~~eAl~~A~ 39 (78)
T 1tif_A 12 RAREVRLIDQNGDQLGIKSKQEALEIAA 39 (78)
T ss_dssp CCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred CCCEEEEECCCCcCCCcccHHHHHHHHH
Confidence 3455778999999999999999887543
No 131
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=36.51 E-value=26 Score=25.15 Aligned_cols=16 Identities=38% Similarity=0.735 Sum_probs=13.6
Q ss_pred EEEECCCCcEEEEEEh
Q 021709 243 LPVVDRDGDVVDVVDV 258 (308)
Q Consensus 243 l~Vvd~~~~~iGiit~ 258 (308)
.||.|++|+++|+|..
T Consensus 106 ~PV~~~~g~viGvv~v 121 (131)
T 1p0z_A 106 SPIQDATGKVIGIVSV 121 (131)
T ss_dssp EEEECTTCCEEEEEEE
T ss_pred EeEECCCCCEEEEEEE
Confidence 4899878999999964
No 132
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=36.37 E-value=16 Score=27.72 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=27.6
Q ss_pred HHHHHHHHHhCCCCEEEEECCCCcEEEEEEhhHHH
Q 021709 228 IVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHIT 262 (308)
Q Consensus 228 l~~~~~~~~~~~~~~l~Vvd~~~~~iGiit~~di~ 262 (308)
+.+..+.+...+...+.|.. +|+++|+|...|.+
T Consensus 121 ~~~~~~~la~~G~T~v~VA~-d~~l~GvIalaD~i 154 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVE-GSRVLGVIALKDIV 154 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEE-TTEEEEEEEEEECC
T ss_pred HHHHHHHHHhCCCCEEEEEE-CCEEEEEEEEecCC
Confidence 66777888888887887775 69999999988865
No 133
>3llb_A Uncharacterized protein; protein PA3983, unknown function, structural genomics, PSI2, MCSG, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: d.145.1.0
Probab=35.55 E-value=11 Score=25.06 Aligned_cols=26 Identities=12% Similarity=-0.026 Sum_probs=17.1
Q ss_pred hhHHHHHHhhccCCCCCchhhhcccc
Q 021709 282 TMMQKFWDSAMALSPNDDEEDNRRFY 307 (308)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (308)
....+..+..+.++++.++|+|.+||
T Consensus 16 ~~~l~dl~~~l~~~l~~~~~~Tl~G~ 41 (83)
T 3llb_A 16 LTPVDAFNDFFGSEFSDEEFDTVGGL 41 (83)
T ss_dssp TCBHHHHHHHHCCCCCTTTCSBHHHH
T ss_pred cCCHHHHHHHhCCCCCCCCCcCHHHH
Confidence 33444455566667777788888876
No 134
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=35.48 E-value=27 Score=25.57 Aligned_cols=26 Identities=15% Similarity=0.033 Sum_probs=18.1
Q ss_pred CcHHHHHHHHHH-cCCcEEEEee-CCEE
Q 021709 161 DTVLMATKKMLE-LRLSSAVVTV-ENKP 186 (308)
Q Consensus 161 ~~~~~~~~~~~~-~~~~~~~V~~-~~~~ 186 (308)
..+...++.+.+ .+...+.|+| +|..
T Consensus 41 ~~l~~~~~~~~~~~~~~~i~v~d~~G~~ 68 (142)
T 3by8_A 41 SGIQAIAEAVRKRNDLLFIVVTDMQSLR 68 (142)
T ss_dssp CSHHHHHHHHHHHTTCSEEEEEETTCBB
T ss_pred HHHHHHHHHHHhhcCCcEEEEECCCCcE
Confidence 446677766664 5788899999 6643
No 135
>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} SCOP: d.145.1.4 PDB: 2o1r_A*
Probab=33.01 E-value=12 Score=24.63 Aligned_cols=28 Identities=0% Similarity=-0.064 Sum_probs=18.0
Q ss_pred hhhhHHHHHHhhccCCCCCchhhhcccc
Q 021709 280 ASTMMQKFWDSAMALSPNDDEEDNRRFY 307 (308)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (308)
......+..+..+.++++.++|+|.+||
T Consensus 14 ~g~~~l~dl~~~l~~~l~~~~~~Tl~G~ 41 (81)
T 3lae_A 14 DGSANLRDLNKMFNWELDTEDARTFNGL 41 (81)
T ss_dssp ETTCBHHHHHHHHCCCCCCSSCSBHHHH
T ss_pred EeeCCHHHHHHHhCCCCCCCCCccHHHH
Confidence 3334444555566667777788888876
No 136
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=32.61 E-value=23 Score=28.20 Aligned_cols=24 Identities=21% Similarity=0.182 Sum_probs=17.4
Q ss_pred CCCEEEEECCCCcEEEEEEhhHHH
Q 021709 239 KFLHLPVVDRDGDVVDVVDVIHIT 262 (308)
Q Consensus 239 ~~~~l~Vvd~~~~~iGiit~~di~ 262 (308)
+-+--||+|.+|+++||-+..|=.
T Consensus 125 GdSGsPVvn~dG~VIGVHt~s~~~ 148 (213)
T 3fan_A 125 GDSGSPVITEAGELVGVHTGSNKQ 148 (213)
T ss_dssp CSTTCEEEETTSCEEEEEEC----
T ss_pred CCCCCccCCCCCcEEEEEeccCCc
Confidence 555679999999999999977644
No 137
>2rk5_A Putative hemolysin; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics, membrane; 1.50A {Streptococcus mutans UA159} SCOP: d.145.1.4
Probab=29.61 E-value=14 Score=24.71 Aligned_cols=24 Identities=8% Similarity=0.052 Sum_probs=15.1
Q ss_pred HHHHHHhhccCCCCCchhhhcccc
Q 021709 284 MQKFWDSAMALSPNDDEEDNRRFY 307 (308)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~ 307 (308)
..+..+..+.++++.++|+|.+||
T Consensus 17 ~l~dl~~~l~~~l~~~~~dTl~G~ 40 (87)
T 2rk5_A 17 TLNDFNEYFETDLESDNVDTIAGF 40 (87)
T ss_dssp BHHHHHHHHTCCCCCTTCCBHHHH
T ss_pred CHHHHHHHhCCCCCCCCcccHHHH
Confidence 344445555666666678888776
No 138
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=28.55 E-value=34 Score=25.96 Aligned_cols=23 Identities=22% Similarity=0.248 Sum_probs=18.2
Q ss_pred HhCCCCEEEEECCCCcEEEEEEh
Q 021709 236 HDGKFLHLPVVDRDGDVVDVVDV 258 (308)
Q Consensus 236 ~~~~~~~l~Vvd~~~~~iGiit~ 258 (308)
...+-+--|++|.+|+++||.+.
T Consensus 122 i~pGnSGGPl~n~~G~VVGI~~~ 144 (163)
T 2w5e_A 122 TQDGMSGAPVCDKYCRVLAVHQT 144 (163)
T ss_dssp CSSCCTTCEEECTTSCEEEEEEE
T ss_pred eCCCCchhhEEcCCCEEEEEEcc
Confidence 34455667999999999999863
No 139
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=27.96 E-value=33 Score=27.55 Aligned_cols=21 Identities=24% Similarity=0.363 Sum_probs=17.2
Q ss_pred CCCEEEEECCCCcEEEEEEhh
Q 021709 239 KFLHLPVVDRDGDVVDVVDVI 259 (308)
Q Consensus 239 ~~~~l~Vvd~~~~~iGiit~~ 259 (308)
+-+.-|++|.+|+++||++..
T Consensus 187 G~SGGPLv~~~G~vVGI~s~~ 207 (231)
T 3tjo_A 187 GNAGGPLVNLDGEVIGINTLK 207 (231)
T ss_dssp TTTTSEEECTTSCEEEEEEEE
T ss_pred CCchhHeecCCCeEEEEEeEE
Confidence 455679999899999999854
No 140
>2p3h_A Uncharacterized CBS domain-containing protein; structural genomics, CORC_HLYC, PFAM03471, putative transpor protein; 1.80A {Corynebacterium glutamicum} SCOP: d.145.1.4
Probab=26.57 E-value=17 Score=25.32 Aligned_cols=23 Identities=4% Similarity=-0.062 Sum_probs=14.3
Q ss_pred HHHHHhhccCCCCCchhhhcccc
Q 021709 285 QKFWDSAMALSPNDDEEDNRRFY 307 (308)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~ 307 (308)
.+..+..+.+++++++|+|.+||
T Consensus 22 l~dl~~~lg~~l~~e~~dTlgGl 44 (101)
T 2p3h_A 22 LDEVERAIGYELPEGDYETISGL 44 (101)
T ss_dssp HHHHHHHHTSCCCCSSCCBHHHH
T ss_pred HHHHHHHhCCCCCCCCCccHHHH
Confidence 34444455566666678888776
No 141
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=24.70 E-value=37 Score=27.33 Aligned_cols=21 Identities=10% Similarity=0.090 Sum_probs=17.1
Q ss_pred CCCCEEEEECCCCcEEEEEEh
Q 021709 238 GKFLHLPVVDRDGDVVDVVDV 258 (308)
Q Consensus 238 ~~~~~l~Vvd~~~~~iGiit~ 258 (308)
.+-+.-|++|.+|+++||++.
T Consensus 173 ~G~SGGPlv~~~G~vvGI~s~ 193 (237)
T 3lgi_A 173 HGNSGGALVNSLGELMGINTL 193 (237)
T ss_dssp TTCTTCEEECTTCCEEEEECC
T ss_pred CCCchHHeeCCCCeEEEEEee
Confidence 345567999999999999975
No 142
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=23.89 E-value=1.8e+02 Score=20.68 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=24.5
Q ss_pred CCCEEEEECCCCcEEEE-EEhhHHHHHHHHHhcCC
Q 021709 239 KFLHLPVVDRDGDVVDV-VDVIHITHAAVATVGNT 272 (308)
Q Consensus 239 ~~~~l~Vvd~~~~~iGi-it~~di~~~~~~~~~~~ 272 (308)
....+.++|.+|++++. ++..++.+.+-......
T Consensus 109 ~~P~~~lid~~G~i~~~~~~~~~l~~~l~~l~~~~ 143 (152)
T 2lrn_A 109 GFPHIILVDPEGKIVAKELRGDDLYNTVEKFVNGA 143 (152)
T ss_dssp SSCEEEEECTTSEEEEECCCTTHHHHHHHHHHTSS
T ss_pred cCCeEEEECCCCeEEEeeCCHHHHHHHHHHHHhhc
Confidence 45677889999999988 56777776665555543
No 143
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=23.64 E-value=44 Score=27.18 Aligned_cols=21 Identities=5% Similarity=0.134 Sum_probs=17.2
Q ss_pred CCCCEEEEECCCCcEEEEEEh
Q 021709 238 GKFLHLPVVDRDGDVVDVVDV 258 (308)
Q Consensus 238 ~~~~~l~Vvd~~~~~iGiit~ 258 (308)
.+-+.-|++|.+|+++||.|.
T Consensus 184 ~G~SGGPLvn~~G~vVGI~s~ 204 (245)
T 3sti_A 184 RGNSGGALLNLNGELIGINTA 204 (245)
T ss_dssp TTTTTSEEECTTSCEEEEEEC
T ss_pred CCcchhHeecCCCeEEEEEEe
Confidence 355567999999999999985
No 144
>2r2z_A Hemolysin; APC85144, enterococcus faecalis V583, STRU initiative, midwest center for structural genomics, MCSG; 1.20A {Enterococcus faecalis} SCOP: d.145.1.4
Probab=23.19 E-value=22 Score=24.05 Aligned_cols=22 Identities=9% Similarity=0.096 Sum_probs=12.0
Q ss_pred HHHHhhccCCCCCchhhhcccc
Q 021709 286 KFWDSAMALSPNDDEEDNRRFY 307 (308)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~ 307 (308)
...+..+.++++.++|+|.+||
T Consensus 27 ~dl~~~l~~~l~~~~~~TlgG~ 48 (93)
T 2r2z_A 27 DEFNEVFETDLHMSDVDTMAGY 48 (93)
T ss_dssp HHHHHHHTCCCCCTTCCBHHHH
T ss_pred HHHHHHhCCCCCCCCcccHHHH
Confidence 3334444455555567776665
No 145
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=23.03 E-value=46 Score=26.65 Aligned_cols=21 Identities=29% Similarity=0.235 Sum_probs=17.0
Q ss_pred CCCEEEEECCCCcEEEEEEhh
Q 021709 239 KFLHLPVVDRDGDVVDVVDVI 259 (308)
Q Consensus 239 ~~~~l~Vvd~~~~~iGiit~~ 259 (308)
+-+.-|++|.+|+++||++..
T Consensus 181 GdSGGPLv~~~G~vvGI~s~~ 201 (237)
T 3k6y_A 181 GDSGGPLIDLNGQVLGVVFGA 201 (237)
T ss_dssp TCTTCEEECTTSCEEEEEEEE
T ss_pred CccHHHEECCCCEEEEEEEee
Confidence 555679999889999999753
No 146
>2pli_A Uncharacterized protein; CORC-associated region, MCSG, PSI2, structural genomics, Pro structure initiative; 1.70A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=22.42 E-value=22 Score=23.96 Aligned_cols=23 Identities=9% Similarity=-0.047 Sum_probs=13.3
Q ss_pred HHHHHhhccCCCCCchhhhcccc
Q 021709 285 QKFWDSAMALSPNDDEEDNRRFY 307 (308)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~ 307 (308)
.+..+..+.++++.++|+|.+||
T Consensus 28 l~dl~~~l~~~l~~~~~dTlgG~ 50 (91)
T 2pli_A 28 IEDINTFFGTEYSSEEADTIGGL 50 (91)
T ss_dssp HHHHHHHHCCCCCCSSCCBHHHH
T ss_pred HHHHHHHhCCCCCCCCCccHHHH
Confidence 33344455555555667777765
No 147
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=22.36 E-value=60 Score=23.94 Aligned_cols=20 Identities=35% Similarity=0.468 Sum_probs=15.0
Q ss_pred EEEEECCCCcEEEEEE-hhHH
Q 021709 242 HLPVVDRDGDVVDVVD-VIHI 261 (308)
Q Consensus 242 ~l~Vvd~~~~~iGiit-~~di 261 (308)
..||.|++|+++|++. ..||
T Consensus 110 ~~Pi~d~~G~~~G~vev~~Di 130 (151)
T 2qkp_A 110 YAAVRDQAGDFQGVLEYVQDI 130 (151)
T ss_dssp EEEEECTTCCEEEEEEEEEEC
T ss_pred EEEEECCCCCEEEEEEEEEEC
Confidence 4688888899999884 3444
No 148
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=21.95 E-value=45 Score=26.15 Aligned_cols=20 Identities=25% Similarity=0.295 Sum_probs=16.4
Q ss_pred CCCEEEEECCCCcEEEEEEh
Q 021709 239 KFLHLPVVDRDGDVVDVVDV 258 (308)
Q Consensus 239 ~~~~l~Vvd~~~~~iGiit~ 258 (308)
+-+.-|+++.+|+++||++.
T Consensus 156 GdSGGPlv~~~g~lvGI~s~ 175 (210)
T 2as9_A 156 GNSGSPVLNSNNEVIGVVYG 175 (210)
T ss_dssp TCTTCEEECTTSCEEEEECC
T ss_pred CCccCcEECCCCeEEEEEec
Confidence 44556999888999999985
No 149
>2p13_A CBS domain; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; 1.65A {Nitrosomonas europaea} SCOP: d.145.1.4
Probab=21.85 E-value=26 Score=23.53 Aligned_cols=23 Identities=9% Similarity=-0.048 Sum_probs=12.6
Q ss_pred HHHHHhhccCCCCC--chhhhcccc
Q 021709 285 QKFWDSAMALSPND--DEEDNRRFY 307 (308)
Q Consensus 285 ~~~~~~~~~~~~~~--~~~~~~~~~ 307 (308)
....+..+.++++. ++|+|.+||
T Consensus 25 l~dl~~~l~~~l~~~~~~~~TlgG~ 49 (90)
T 2p13_A 25 IRKASNLLEHDLVDEAERYSTLGGY 49 (90)
T ss_dssp HHHHHHHHTSCCCCTTCCCCBHHHH
T ss_pred HHHHHHHHCCCCCCcCCCCccHHHH
Confidence 33344444555554 567777765
No 150
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=20.55 E-value=57 Score=25.12 Aligned_cols=21 Identities=10% Similarity=0.153 Sum_probs=16.8
Q ss_pred CCCEEEEECCCCcEEEEEEhh
Q 021709 239 KFLHLPVVDRDGDVVDVVDVI 259 (308)
Q Consensus 239 ~~~~l~Vvd~~~~~iGiit~~ 259 (308)
+-+.-|+++.+|+++||++..
T Consensus 152 GdSGGPl~~~~g~lvGI~s~g 172 (200)
T 2w7s_A 152 GNSGSPVLNSKHELIGILYAG 172 (200)
T ss_dssp TCTTCEEECTTSCEEEEEEEE
T ss_pred CCccCeEECcCCEEEEEEecc
Confidence 445569998789999999864
Done!