Your job contains 1 sequence.
>021710
MTTAALNSSHSHMSSPITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDPAYRLATQS
DDSGSTRPVWNERFTLPITHSVRESVLTLEIFHSKLSETPKPLVGSVKFPLAHLVDSDSS
EPTQYVRKLEVLRPSGRPQGKIRVKLVLNGRPLPPPSQDYQSVPDFGHYYYSAPPPPFPP
PSRDYSYYPSYYTPQPPAPPRPLFSRASSYSLPSGSLSVPSAPVDFSPSQDYKQPPLPPQ
PRASGYGVPSGSGPSAPVDYSPYDQKLQKQFGGLSLEEEVNRKGKEKRAESEFTPRENYS
HSDYRYDY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021710
(308 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2025002 - symbol:AT1G07310 "AT1G07310" species... 477 3.7e-60 3
TAIR|locus:2172828 - symbol:AT5G23950 "AT5G23950" species... 255 7.0e-22 1
TAIR|locus:2041654 - symbol:AT2G13350 "AT2G13350" species... 152 9.7e-09 1
TAIR|locus:2124933 - symbol:AT4G01200 "AT4G01200" species... 135 3.9e-07 1
TAIR|locus:2102980 - symbol:AT3G04360 "AT3G04360" species... 130 4.7e-06 1
TAIR|locus:2036004 - symbol:SRC2 "AT1G09070" species:3702... 116 0.00015 1
TAIR|locus:2100992 - symbol:NTMC2T4 species:3702 "Arabido... 118 0.00018 1
TAIR|locus:2184931 - symbol:SYTD "AT5G11100" species:3702... 115 0.00048 1
>TAIR|locus:2025002 [details] [associations]
symbol:AT1G07310 "AT1G07310" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168
SMART:SM00239 EMBL:CP002684 GenomeReviews:CT485782_GR
InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004 HSSP:P05696
EMBL:AC022464 UniGene:At.32199 EMBL:AY054646 EMBL:AY081489
IPI:IPI00524174 RefSeq:NP_563785.1 UniGene:At.23050
ProteinModelPortal:Q9LNV0 SMR:Q9LNV0 IntAct:Q9LNV0 PaxDb:Q9LNV0
PRIDE:Q9LNV0 EnsemblPlants:AT1G07310.1 GeneID:837242
KEGG:ath:AT1G07310 TAIR:At1g07310 eggNOG:NOG262238
HOGENOM:HOG000238477 InParanoid:Q9LNV0 OMA:VWNERIT PhylomeDB:Q9LNV0
ProtClustDB:CLSN2916980 ArrayExpress:Q9LNV0 Genevestigator:Q9LNV0
Uniprot:Q9LNV0
Length = 352
Score = 477 (173.0 bits), Expect = 3.7e-60, Sum P(3) = 3.7e-60
Identities = 96/165 (58%), Positives = 118/165 (71%)
Query: 14 SSPITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDPAYRLATQSDDSGSTRPVWNER 73
S P+ DL +T++ AKHLKNVNWRNG DLKPYVV Y+D + L+T+SDDS S +PVWNER
Sbjct: 4 SEPL--DLVVTVVSAKHLKNVNWRNG-DLKPYVVLYLDQDHPLSTRSDDSSSIKPVWNER 60
Query: 74 FTLPITHSVRESVLTLEIFHSKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLR 133
TLP+T SV ESVL +E+FHS S+ K LVGSV+FPLA L+DSD S + + LE++R
Sbjct: 61 ITLPLTRSVHESVLNIEVFHSNSSDLAKTLVGSVRFPLARLIDSDGSMIPELINSLELVR 120
Query: 134 PSGRPQGKIRVKLVLNGRPLPPP--------SQ--DYQSVPDFGH 168
PSGRPQGKIR+KL + RP+PPP SQ DY S P H
Sbjct: 121 PSGRPQGKIRLKLAIKDRPIPPPQHPPPRPQSQPLDYYSAPQGNH 165
Score = 122 (48.0 bits), Expect = 3.7e-60, Sum P(3) = 3.7e-60
Identities = 30/49 (61%), Positives = 34/49 (69%)
Query: 259 DYSPYDQK-LQKQFGGLSLEEEVNRKGKEKRAESEFTPRENYSHS-DYR 305
DYSPYD + LQK GGLSLEEE R E R+ES+F R NYS+ DYR
Sbjct: 304 DYSPYDHRQLQKTMGGLSLEEE--RAAAE-RSESDFGARPNYSYGRDYR 349
Score = 47 (21.6 bits), Expect = 3.7e-60, Sum P(3) = 3.7e-60
Identities = 12/17 (70%), Positives = 13/17 (76%)
Query: 226 FSPSQDYKQPPLPPQPR 242
FS S D+KQPPL P PR
Sbjct: 242 FS-SIDHKQPPLAP-PR 256
Score = 36 (17.7 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 152 PLPPPSQDYQSVPDFG 167
P PPP Y ++G
Sbjct: 215 PPPPPRSMYDRASNYG 230
>TAIR|locus:2172828 [details] [associations]
symbol:AT5G23950 "AT5G23950" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168
SMART:SM00239 EMBL:CP002688 SUPFAM:SSF49562 EMBL:BT020351
IPI:IPI00516888 RefSeq:NP_197783.2 UniGene:At.30986
ProteinModelPortal:Q5PNU6 PaxDb:Q5PNU6 PRIDE:Q5PNU6
EnsemblPlants:AT5G23950.1 GeneID:832460 KEGG:ath:AT5G23950
eggNOG:NOG237651 OMA:GASYVED ProtClustDB:CLSN2918243
Genevestigator:Q5PNU6 Uniprot:Q5PNU6
Length = 219
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 53/135 (39%), Positives = 81/135 (60%)
Query: 20 DLEITIICAKHLKNVNWRNGGDLKPYVVFYVDPAYRLATQSDDSGSTRPVWNERFT--LP 77
++E+TI AK +KNVNWRNG + KPY V ++DP ++ +T+ D+ G+T WNE F LP
Sbjct: 7 EVEVTISSAKDIKNVNWRNGPN-KPYAVVWIDPKFKSSTRVDEDGNTCTTWNETFVIALP 65
Query: 78 ITHSVRESVLTLEIFHSKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPSGR 137
+ + V + I H+ E KPL+GS L ++D D +++ L++ RPSGR
Sbjct: 66 PANDDDDKVY-INIVHAGREENTKPLIGSAHLSLRDVID-DVGFGVPFMKTLKLKRPSGR 123
Query: 138 PQGKIRVKLVLNGRP 152
PQGK+ V + + P
Sbjct: 124 PQGKLDVTVTVRETP 138
>TAIR|locus:2041654 [details] [associations]
symbol:AT2G13350 "AT2G13350" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0006944 "cellular membrane
fusion" evidence=RCA] InterPro:IPR000008 InterPro:IPR008973
Pfam:PF00168 SMART:SM00239 EMBL:CP002685 SUPFAM:SSF49562
EMBL:AC007209 EMBL:AC006446 EMBL:BT005348 EMBL:AK118570
IPI:IPI00536425 PIR:A84507 RefSeq:NP_178968.1 UniGene:At.40669
ProteinModelPortal:Q9SI42 SMR:Q9SI42 STRING:Q9SI42
EnsemblPlants:AT2G13350.1 GeneID:815821 KEGG:ath:AT2G13350
TAIR:At2g13350 HOGENOM:HOG000114072 InParanoid:Q9SI42 OMA:NICGIEC
PhylomeDB:Q9SI42 ProtClustDB:CLSN2912990 ArrayExpress:Q9SI42
Genevestigator:Q9SI42 Uniprot:Q9SI42
Length = 401
Score = 152 (58.6 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 47/140 (33%), Positives = 74/140 (52%)
Query: 21 LEITIICAKHLKNVNWRNGGDLKPYVVFYVDPAYRLATQSDDSGSTRPVWNERFTLPITH 80
LE+ II A+ L V +K Y + ++DP +L T+ D++G T P WN++F +
Sbjct: 10 LELNIISAQELAPV----ARCMKTYAIAWIDPERKLTTRVDNTGGTSPTWNDKFVFRLDE 65
Query: 81 SV---RESVLTLEIFHSKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPSGR 137
S++ +EI+ L VG+V+ ++ LV S+ ++V LEVLR SGR
Sbjct: 66 EALYDATSIVVIEIY--ALHWFKDIHVGTVQALISDLVSPSSA--MRFVT-LEVLRASGR 120
Query: 138 PQG--KIRVKLVLN-GRPLP 154
P G I V L+ N G+ +P
Sbjct: 121 PHGLLNIAVGLIDNSGQSMP 140
>TAIR|locus:2124933 [details] [associations]
symbol:AT4G01200 "AT4G01200" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168
SMART:SM00239 EMBL:CP002687 GenomeReviews:CT486007_GR
InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004 EMBL:AL161491
EMBL:AY080883 EMBL:AY114050 IPI:IPI00528057 PIR:G85015
RefSeq:NP_192029.1 UniGene:At.34467 ProteinModelPortal:Q9M148
SMR:Q9M148 EnsemblPlants:AT4G01200.1 GeneID:828043
KEGG:ath:AT4G01200 TAIR:At4g01200 eggNOG:NOG299143
HOGENOM:HOG000153213 InParanoid:Q9M148 OMA:GSENPIW PhylomeDB:Q9M148
ProtClustDB:CLSN2685478 Genevestigator:Q9M148 Uniprot:Q9M148
Length = 250
Score = 135 (52.6 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 39/141 (27%), Positives = 75/141 (53%)
Query: 18 THDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDPAYRLATQSDDSGSTRPVWNERFTLP 77
T LEI +I A+ LK + L+ Y +VD + +L T+ D GS P+WN++F
Sbjct: 4 TQVLEINLISAQGLKEPTGKLRR-LQTYASVWVDSSSKLRTRIDRIGSENPIWNDKFVFQ 62
Query: 78 ITH---SVRESVLTLEIFHSKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRP 134
++ S S +++EI+ + L+G+V+F +++ + + + + V L++ RP
Sbjct: 63 VSPEFLSSETSGVSIEIY--AVGYLRDHLIGTVRFLVSNFLPTAAVKVPSLVA-LQIRRP 119
Query: 135 SGRPQGKIRVK-LVLNGRPLP 154
SG+ G + + +V++ LP
Sbjct: 120 SGKFHGVLNIAAMVMDASELP 140
>TAIR|locus:2102980 [details] [associations]
symbol:AT3G04360 "AT3G04360" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000008
InterPro:IPR008973 Pfam:PF00168 SMART:SM00239 EMBL:CP002686
InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004 IPI:IPI00521914
RefSeq:NP_566225.4 UniGene:At.40850 ProteinModelPortal:F4J3N4
PRIDE:F4J3N4 EnsemblPlants:AT3G04360.1 GeneID:819591
KEGG:ath:AT3G04360 OMA:CEISITC Uniprot:F4J3N4
Length = 391
Score = 130 (50.8 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 48/152 (31%), Positives = 77/152 (50%)
Query: 21 LEITIICAKHLKNVNWRNGGDLKPYVVFYV--DPAYRLATQSDDSGSTRPVWNERFTLPI 78
LEI +I A+ L V+ RN +K Y V ++ DP +L T+ D S P+WNE+F +
Sbjct: 11 LEINLISAQDLAPVS-RN---MKTYSVAWINTDPMRKLTTRVDQSNRANPIWNEKFVFRV 66
Query: 79 THS---VRESVLTLEIFHSKLSETPKPLVGSVKFPLAHLV--------DSDSSEPTQYVR 127
V S + +EI+ + ++ LVG+V L+ L +D +R
Sbjct: 67 NDKILYVDASAIVIEIYAAAWAKDA--LVGTVNVLLSDLFAPWSGFGDGNDGGGGNNNMR 124
Query: 128 --KLEVLRPSGRPQGKIRVKL-VLNG--RPLP 154
L++ RPSGR QG +R+ + +L+G R +P
Sbjct: 125 LVTLQIRRPSGRLQGFLRLGVALLDGGQRSMP 156
>TAIR|locus:2036004 [details] [associations]
symbol:SRC2 "AT1G09070" species:3702 "Arabidopsis
thaliana" [GO:0000326 "protein storage vacuole" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006623 "protein
targeting to vacuole" evidence=RCA;TAS] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0006820 "anion transport"
evidence=RCA] [GO:0006862 "nucleotide transport" evidence=RCA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0009611
"response to wounding" evidence=RCA] [GO:0009612 "response to
mechanical stimulus" evidence=RCA] [GO:0009646 "response to absence
of light" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0015696 "ammonium transport"
evidence=RCA] [GO:0015802 "basic amino acid transport"
evidence=RCA] [GO:0043069 "negative regulation of programmed cell
death" evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043269 "regulation of ion transport" evidence=RCA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000008
InterPro:IPR008973 Pfam:PF00168 SMART:SM00239 GO:GO:0005783
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
SUPFAM:SSF49562 EMBL:AC000106 GO:GO:0006623 UniGene:At.71449
GO:GO:0000326 UniGene:At.24245 EMBL:AY045580 EMBL:AY142027
IPI:IPI00527850 PIR:G86222 RefSeq:NP_563835.1 UniGene:At.31705
UniGene:At.5402 UniGene:At.74046 ProteinModelPortal:O04023
SMR:O04023 STRING:O04023 PaxDb:O04023 PRIDE:O04023
EnsemblPlants:AT1G09070.1 GeneID:837428 KEGG:ath:AT1G09070
TAIR:At1g09070 eggNOG:NOG246378 HOGENOM:HOG000238638
InParanoid:O04023 OMA:QGPYGYP PhylomeDB:O04023
ProtClustDB:CLSN2916988 Genevestigator:O04023 Uniprot:O04023
Length = 324
Score = 116 (45.9 bits), Expect = 0.00015, P = 0.00015
Identities = 37/126 (29%), Positives = 60/126 (47%)
Query: 21 LEITIICAKHLKNVNWRNGGDLKPYVVFYVDPAYRLATQSDDSGSTRPVWNERFTLPITH 80
L++TII A+ LK+V DL V D + T+ D T+P W + L +
Sbjct: 6 LDLTIISAEDLKDVQLIGKQDLYAVVSINGDARTKQKTKVDKDCGTKPKWKHQMKLTVDD 65
Query: 81 SV-RESVLTL--EIFHSKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPSGR 137
+ R++ LTL EI + KP VG V P+ L+D + + + V V P+G+
Sbjct: 66 AAARDNRLTLVFEIVADRPIAGDKP-VGEVSVPVKELLDQNKGDEEKTVT-YAVRLPNGK 123
Query: 138 PQGKIR 143
+G ++
Sbjct: 124 AKGSLK 129
>TAIR|locus:2100992 [details] [associations]
symbol:NTMC2T4 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0008289 "lipid
binding" evidence=ISS;IDA] [GO:0009414 "response to water
deprivation" evidence=IMP] [GO:0009651 "response to salt stress"
evidence=IMP] [GO:0009958 "positive gravitropism" evidence=IMP]
[GO:0031965 "nuclear membrane" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA;IPI] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168 SMART:SM00239
GO:GO:0005783 GO:GO:0005886 EMBL:CP002686 GO:GO:0045892
GO:GO:0009651 GO:GO:0009414 GO:GO:0043565 GO:GO:0031965
GO:GO:0009958 InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004
GO:GO:0008289 HSSP:P05696 InterPro:IPR020477 PRINTS:PR00360
EMBL:AL358732 EMBL:BT004564 EMBL:AK227322 IPI:IPI00534051
PIR:T50526 RefSeq:NP_001030908.1 RefSeq:NP_191664.1
UniGene:At.25576 ProteinModelPortal:Q9LEX1 SMR:Q9LEX1 PRIDE:Q9LEX1
EnsemblPlants:AT3G61050.1 EnsemblPlants:AT3G61050.2 GeneID:825277
KEGG:ath:AT3G61050 TAIR:At3g61050 HOGENOM:HOG000083395
InParanoid:Q9LEX1 OMA:FPEWISF PhylomeDB:Q9LEX1
ProtClustDB:CLSN2685232 Genevestigator:Q9LEX1 Uniprot:Q9LEX1
Length = 510
Score = 118 (46.6 bits), Expect = 0.00018, P = 0.00018
Identities = 34/128 (26%), Positives = 63/128 (49%)
Query: 21 LEITIICAKHLKNVNWRNGGDLKPYVVFYVDPAYRLATQSDDSGSTRPVWNERFTLPITH 80
L +T++ A +LKN D PY Y+ P ++ T++ ++ + PVW++ F L I
Sbjct: 265 LIVTVVKATNLKNKELIGKSD--PYATIYIRPVFKYKTKAIEN-NLNPVWDQTFEL-IAE 320
Query: 81 SVRESVLTLEIFHSKLSETPKPLVGSVKFPLAHLVDSDSSE-PTQYVRKLEVLRPSGRP- 138
LT+E+F + + + +G VK PL+ L + E + L+ L+ +
Sbjct: 321 DKETQSLTVEVFDKDVGQDER--LGLVKLPLSSLEAGVTKELELNLLSSLDTLKVKDKKD 378
Query: 139 QGKIRVKL 146
+G I +K+
Sbjct: 379 RGSITLKV 386
>TAIR|locus:2184931 [details] [associations]
symbol:SYTD "AT5G11100" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010638
"positive regulation of organelle organization" evidence=RCA]
[GO:0016126 "sterol biosynthetic process" evidence=RCA] [GO:0019745
"pentacyclic triterpenoid biosynthetic process" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168 SMART:SM00239
GO:GO:0016021 EMBL:CP002688 GO:GO:0046872 InterPro:IPR018029
SUPFAM:SSF49562 PROSITE:PS50004 GO:GO:0008289 eggNOG:COG5038
EMBL:AL391222 EMBL:AM410051 IPI:IPI00523689 PIR:T51799
RefSeq:NP_196671.2 UniGene:At.54810 ProteinModelPortal:A0JJX5
SMR:A0JJX5 PaxDb:A0JJX5 PRIDE:A0JJX5 EnsemblPlants:AT5G11100.1
GeneID:830978 KEGG:ath:AT5G11100 TAIR:At5g11100 InParanoid:A0JJX5
OMA:TQHLTVR PhylomeDB:A0JJX5 ProtClustDB:CLSN2697228
ArrayExpress:A0JJX5 Genevestigator:A0JJX5 Uniprot:A0JJX5
Length = 569
Score = 115 (45.5 bits), Expect = 0.00048, P = 0.00048
Identities = 34/129 (26%), Positives = 62/129 (48%)
Query: 21 LEITIICAKHLKNVNWRNGGDLKPYVVFYVDPAY-RLATQSDDSGSTRPVWNERFTLPIT 79
L++ ++ AK L N + D PY + ++ P R S S P+WNE F I
Sbjct: 266 LDVKVVQAKDLANKDMIGKSD--PYAIVFIRPLPDRTKKTKTISNSLNPIWNEHFEF-IV 322
Query: 80 HSVRESVLTLEIFHSKLSETPKPLVGSVKFPLAHLVDSDSSEP-TQYVRKLEVLRPSGRP 138
V LT+ +F + L+G+ + PL LV + + V+ LE+ R + +
Sbjct: 323 EDVSTQHLTVRVFDDE-GVGSSQLIGAAQVPLNELVPGKVKDIWLKLVKDLEIQRDT-KN 380
Query: 139 QGKIRVKLV 147
+G+++++L+
Sbjct: 381 RGQVQLELL 389
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.133 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 308 236 0.00089 113 3 11 23 0.49 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 596 (63 KB)
Total size of DFA: 188 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.65u 0.13s 22.78t Elapsed: 00:00:01
Total cpu time: 22.65u 0.13s 22.78t Elapsed: 00:00:01
Start: Fri May 10 08:19:45 2013 End: Fri May 10 08:19:46 2013