Query 021710
Match_columns 308
No_of_seqs 254 out of 1305
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 08:09:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021710.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021710hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dmh_A Myoferlin; beta-sandwic 99.9 7.5E-21 2.6E-25 156.3 17.3 124 17-151 5-134 (140)
2 1wfj_A Putative elicitor-respo 99.9 2.2E-21 7.6E-26 158.7 11.7 124 17-151 8-131 (136)
3 2ep6_A MCTP2 protein; beta san 99.9 7.7E-21 2.6E-25 155.2 13.6 119 17-149 11-131 (133)
4 3b7y_A E3 ubiquitin-protein li 99.9 2.3E-20 7.8E-25 155.8 16.5 129 16-150 17-153 (153)
5 2fk9_A Protein kinase C, ETA t 99.8 6.5E-21 2.2E-25 161.2 11.7 123 16-149 26-156 (157)
6 3m7f_B E3 ubiquitin-protein li 99.8 4.3E-20 1.5E-24 158.1 15.9 129 17-151 6-142 (176)
7 2nq3_A Itchy homolog E3 ubiqui 99.8 1.8E-20 6.3E-25 160.8 13.2 127 17-151 34-162 (173)
8 1gmi_A Protein kinase C, epsil 99.8 1.5E-20 5.2E-25 154.2 11.6 120 18-150 5-133 (136)
9 3kwu_A MUNC13-1; calcium bindi 99.8 1.1E-19 3.7E-24 150.8 16.7 119 18-149 16-146 (148)
10 3pyc_A E3 ubiquitin-protein li 99.8 1.3E-19 4.3E-24 147.7 14.2 122 17-149 3-132 (132)
11 1rlw_A Phospholipase A2, CALB 99.8 3.8E-19 1.3E-23 143.3 13.5 116 18-147 2-122 (126)
12 1a25_A CALB, protein kinase C 99.8 2.2E-18 7.5E-23 143.3 12.1 106 18-133 30-139 (149)
13 2d8k_A Synaptotagmin VII; exoc 99.8 6.4E-18 2.2E-22 139.1 12.8 109 17-134 24-136 (141)
14 3rdl_A Protein kinase C alpha 99.8 4.4E-18 1.5E-22 138.8 11.3 108 17-134 14-125 (137)
15 2b3r_A Phosphatidylinositol-4- 99.8 6.3E-18 2.1E-22 138.5 12.2 107 17-133 18-130 (134)
16 3f04_A Synaptotagmin-1; C2A, c 99.8 4.4E-18 1.5E-22 140.3 11.4 108 17-133 32-142 (143)
17 1rsy_A Synaptotagmin I; calciu 99.8 6.4E-18 2.2E-22 141.0 12.3 108 17-133 40-150 (152)
18 2z0u_A WW domain-containing pr 99.7 2.2E-18 7.6E-23 145.1 8.5 108 17-132 41-154 (155)
19 3fbk_A RGS3, RGP3, regulator o 99.7 3.9E-18 1.3E-22 142.6 9.7 110 17-135 25-139 (153)
20 1v27_A Regulating synaptic mem 99.7 6.9E-18 2.4E-22 138.3 10.5 107 18-134 20-134 (141)
21 2bwq_A Regulating synaptic mem 99.7 1.5E-17 5.2E-22 134.4 11.6 105 18-132 17-129 (129)
22 2cjt_A UNC-13 homolog A, MUNC1 99.7 1.3E-17 4.4E-22 136.6 11.1 118 19-148 5-130 (131)
23 2q3x_A Regulating synaptic mem 99.7 1.4E-17 4.9E-22 142.0 11.7 108 17-135 28-141 (171)
24 2chd_A Rabphilin-3A, exophilin 99.7 1.3E-17 4.3E-22 137.3 11.0 108 17-133 27-140 (142)
25 1ugk_A Synaptotagmin IV, KIAA1 99.7 3.7E-17 1.3E-21 134.0 13.3 110 17-133 20-133 (138)
26 1rh8_A Piccolo protein; beta-s 99.7 2.7E-18 9.4E-23 141.2 6.1 109 18-135 17-140 (142)
27 3fdw_A Synaptotagmin-like prot 99.7 9.6E-18 3.3E-22 139.3 9.3 109 18-135 22-136 (148)
28 1wfm_A Synaptotagmin XIII; C2 99.7 4.1E-17 1.4E-21 134.2 13.0 105 18-134 25-133 (138)
29 2enp_A B/K protein; C2 type 1, 99.7 2.1E-17 7E-22 137.0 10.5 107 18-133 25-141 (147)
30 2r83_A Synaptotagmin-1; C2A-C2 99.7 1.2E-16 4.2E-21 145.8 16.5 125 17-150 17-147 (284)
31 1tjx_A Similar to synaptotagmi 99.7 4.7E-17 1.6E-21 136.7 12.4 110 17-133 23-147 (159)
32 2dmg_A KIAA1228 protein; beta- 99.7 2E-17 6.8E-22 136.1 9.9 113 18-139 23-141 (142)
33 3n5a_A Synaptotagmin-7; calciu 99.7 4.9E-17 1.7E-21 132.6 11.5 95 17-115 14-113 (138)
34 2cm5_A Rabphilin-3A; protein t 99.7 8.3E-17 2.8E-21 136.2 13.1 94 17-114 35-133 (166)
35 1w15_A Synaptotagmin IV; metal 99.7 7.5E-17 2.5E-21 134.5 12.4 93 17-113 28-125 (153)
36 2cjs_A UNC-13 homolog A, MUNC1 99.7 2.4E-16 8.4E-21 134.3 13.1 122 18-151 13-142 (167)
37 3l9b_A Otoferlin; C2-domain, b 99.7 5.2E-16 1.8E-20 128.0 11.9 120 18-151 20-141 (144)
38 1dqv_A Synaptotagmin III; beta 99.7 7.9E-16 2.7E-20 141.9 14.2 126 17-150 18-149 (296)
39 3jzy_A Intersectin 2; C2 domai 99.6 7.3E-16 2.5E-20 151.8 12.8 123 17-149 385-507 (510)
40 3nsj_A Perforin-1; pore formin 99.6 1.9E-15 6.6E-20 150.4 15.4 114 18-152 393-506 (540)
41 1djx_A PLC-D1, phosphoinositid 99.6 2.7E-15 9.2E-20 152.0 16.1 122 17-150 495-624 (624)
42 2r83_A Synaptotagmin-1; C2A-C2 99.6 3E-14 1E-18 129.9 13.0 109 18-133 149-272 (284)
43 3bxj_A RAS GTPase-activating p 99.5 1.4E-15 4.7E-20 149.9 -0.0 121 18-153 10-160 (483)
44 1cjy_A CPLA2, protein (cytosol 99.5 5.8E-14 2E-18 144.1 11.4 107 15-132 14-125 (749)
45 3qr0_A Phospholipase C-beta (P 99.4 1E-12 3.5E-17 136.1 15.7 115 17-151 648-772 (816)
46 3ohm_B 1-phosphatidylinositol- 99.4 7.5E-13 2.6E-17 137.9 13.5 115 17-151 723-846 (885)
47 1dqv_A Synaptotagmin III; beta 99.4 1E-13 3.5E-18 127.7 4.8 94 18-115 151-249 (296)
48 2zkm_X 1-phosphatidylinositol- 99.4 2.2E-12 7.7E-17 133.8 15.2 113 17-149 676-798 (799)
49 3pfq_A PKC-B, PKC-beta, protei 99.4 2.1E-12 7.3E-17 131.8 11.5 107 18-134 171-281 (674)
50 2enj_A NPKC-theta, protein kin 99.2 1.3E-10 4.6E-15 94.4 12.4 115 18-150 9-130 (138)
51 1yrk_A NPKC-delta, protein kin 99.2 5E-10 1.7E-14 89.9 13.8 115 19-149 6-124 (126)
52 2yrb_A Protein fantom; beta sa 96.4 0.011 3.8E-07 49.1 8.2 128 16-151 15-151 (156)
53 3l4c_A Dedicator of cytokinesi 95.5 0.22 7.5E-06 43.5 12.5 57 54-111 77-137 (220)
54 1dx0_A Prion protein; brain, r 93.9 0.0042 1.4E-07 53.6 -2.4 30 253-282 96-125 (219)
55 2wxf_A Phosphatidylinositol-4, 91.6 0.67 2.3E-05 48.8 9.7 72 18-95 216-294 (940)
56 3hhm_A Phosphatidylinositol-4, 89.4 1.6 5.5E-05 46.5 10.3 92 18-114 354-455 (1091)
57 1e7u_A Phosphatidylinositol 3- 84.6 2.8 9.5E-05 44.2 8.8 72 19-95 218-296 (961)
58 1tpx_A Prion protein, major pr 82.7 0.11 3.7E-06 40.9 -2.0 20 261-280 5-24 (121)
59 3heq_A Major prion protein; ce 82.5 0.12 4.2E-06 40.9 -1.8 24 257-280 22-45 (142)
60 2qzq_A Axin interactor, dorsal 82.1 2.5 8.6E-05 34.6 5.8 93 19-116 14-115 (152)
61 2y3a_A Phosphatidylinositol-4, 80.0 2.4 8.3E-05 45.2 6.3 72 18-95 352-430 (1092)
62 2lbg_A Major prion protein; co 75.0 2.1 7.1E-05 24.3 2.2 18 263-280 8-25 (27)
63 1xu0_A Prion protein, XLPRP; a 61.4 1.1 3.6E-05 35.6 -1.2 19 261-279 19-37 (130)
64 1u3m_A CHPRP, prion-like prote 50.1 1.2 4E-05 34.5 -2.6 16 265-280 1-16 (117)
65 2pbd_V VAsp, vasodilator-stimu 44.7 14 0.00047 23.5 2.2 9 260-269 22-30 (43)
66 1dx0_A Prion protein; brain, r 42.7 1.8 6.1E-05 37.3 -2.9 26 253-278 100-125 (219)
67 2k1k_A Ephrin type-A receptor 39.5 27 0.00091 21.5 2.9 24 257-280 7-30 (38)
68 1u5l_A Prion protein; pRNP, PR 38.2 1.5 5.1E-05 33.6 -3.6 17 265-281 1-17 (108)
No 1
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=7.5e-21 Score=156.28 Aligned_cols=124 Identities=16% Similarity=0.239 Sum_probs=104.1
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcCCceEEEEeecCCCCCCccccEEEEeeeCC--CCCceEEEEEEec
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDPAYRLATQSDDSGSTRPVWNERFTLPITHS--VRESVLTLEIFHS 94 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~~~k~kT~v~k~gt~nP~WnE~f~f~l~~~--~~~~~L~l~V~d~ 94 (308)
..+.|+|+|++|++|...+. + .+||||++++.. .+++|+++++ +.||+|||+|.|.+... .....|.|+|||+
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g--~~dpyv~v~~~~-~~~kT~v~~~-t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~ 79 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-G--KPDPIVSVIFKD-EKKKTKKVDN-ELNPVWNEILEFDLRGIPLDFSSSLGIIVKDF 79 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-S--CCCEEEEEECSS-CEEECCCCCS-CSSCEEEEEEEEECSSCCCCTTCEEEEEEEET
T ss_pred CCcEEEEEEEEeeCCCCCCC-C--CCCeEEEEEECC-EeEEeeeecC-CCCCccCcEEEEEecccccCCCCEEEEEEEEC
Confidence 34899999999999999887 5 499999999996 6899999998 89999999999998753 2467899999999
Q ss_pred cCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEE---EeCCCC-CCccEEEEEEEEccC
Q 021710 95 KLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLE---VLRPSG-RPQGKIRVKLVLNGR 151 (308)
Q Consensus 95 ~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~---L~~~sg-~~~G~L~v~v~~~~~ 151 (308)
+ ...+|++||++.|+|.+|.... ....|+. |.+..+ +..|+|+|+|.|.+.
T Consensus 80 d-~~~~~~~lG~~~i~l~~l~~~~-----~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 80 E-TIGQNKLIGTATVALKDLTGDQ-----SRSLPYKLISLLNEKGQDTGATIDLVIGYDPP 134 (140)
T ss_dssp T-CSSSCCCCEEEEEEGGGTCSSS-----CEEEEEEEEEEECTTCCEEEEEEEEEEEECCC
T ss_pred C-CCCCCceEEEEEEEHHHhccCC-----CceeEEeeeeccCCCCCCCCCEEEEEEEEECC
Confidence 8 3568899999999999997653 2357877 766554 357999999999864
No 2
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.86 E-value=2.2e-21 Score=158.69 Aligned_cols=124 Identities=23% Similarity=0.385 Sum_probs=106.8
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcCCceEEEEeecCCCCCCccccEEEEeeeCCCCCceEEEEEEeccC
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDPAYRLATQSDDSGSTRPVWNERFTLPITHSVRESVLTLEIFHSKL 96 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~~~k~kT~v~k~gt~nP~WnE~f~f~l~~~~~~~~L~l~V~d~~~ 96 (308)
..+.|+|+|++|++|+..+..+. +||||++++.. .+.+|+++++++.||+|||+|.|.+.. ....|.|+|||++
T Consensus 8 ~~~~L~v~v~~a~~L~~~d~~g~--~dpyv~v~~~~-~~~kT~~~~~~~~nP~Wne~f~f~v~~--~~~~l~~~V~d~~- 81 (136)
T 1wfj_A 8 PHGTLEVVLVSAKGLEDADFLNN--MDPYVQLTCRT-QDQKSNVAEGMGTTPEWNETFIFTVSE--GTTELKAKIFDKD- 81 (136)
T ss_dssp CEEEEEEEEEEEEECSSCCSSCS--SCCCEEEESSS-CEEECCCCTTCCSSCEEEEEEEEEEES--SCCEEEEEECCSS-
T ss_pred CcEEEEEEEEeccCCCCcccCCC--cCceEEEEECC-ccceeEeccCCCCCCccCcEEEEEECC--CCCEEEEEEEECC-
Confidence 45899999999999999987764 99999999987 578999998339999999999999987 5678999999998
Q ss_pred CCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCCCCCCccEEEEEEEEccC
Q 021710 97 SETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPSGRPQGKIRVKLVLNGR 151 (308)
Q Consensus 97 ~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~sg~~~G~L~v~v~~~~~ 151 (308)
...+|++||++.|+|.++..... ....||+|. .+++..|+|+|+|.|.+.
T Consensus 82 ~~~~d~~lG~~~i~l~~l~~~~~----~~~~w~~L~-~~~~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 82 VGTEDDAVGEATIPLEPVFVEGS----IPPTAYNVV-KDEEYKGEIWVALSFKPS 131 (136)
T ss_dssp SCTTTCCSEEEEEESHHHHHHSE----EEEEEEEEE-ETTEEEEEEEEEEEEEEC
T ss_pred CCCCCceEEEEEEEHHHhccCCC----CCcEEEEee-cCCccCEEEEEEEEEEeC
Confidence 45689999999999999954321 356899998 566789999999999875
No 3
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.85 E-value=7.7e-21 Score=155.16 Aligned_cols=119 Identities=22% Similarity=0.379 Sum_probs=102.7
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcCCceEEEEeecCCCCCCccccEEEEeeeCCCCCceEEEEEEeccC
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDPAYRLATQSDDSGSTRPVWNERFTLPITHSVRESVLTLEIFHSKL 96 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~~~k~kT~v~k~gt~nP~WnE~f~f~l~~~~~~~~L~l~V~d~~~ 96 (308)
..+.|+|+|++|++|+..+..+. +||||++++.+ .+++|+++++ +.||+|||+|.|.+.. ....|.|+|||++
T Consensus 11 ~~~~L~v~v~~a~~L~~~d~~g~--~dpyv~v~~~~-~~~kT~~~~~-t~nP~wne~f~f~~~~--~~~~l~i~V~d~d- 83 (133)
T 2ep6_A 11 DVGILQVKVLKAADLLAADFSGK--SDPFCLLELGN-DRLQTHTVYK-NLNPEWNKVFTFPIKD--IHDVLEVTVFDED- 83 (133)
T ss_dssp CSEEEEEEEEEEESCCCSSSSSC--CCEEEEEEETT-EEEECCCCSS-CSSCCCCEEEEEEESC--TTCEEEEEEEEEE-
T ss_pred CceEEEEEEEeeECCCCCCCCCC--cCeEEEEEECC-EEEEeeeecC-CCCCccccEEEEEecC--CCCEEEEEEEECC-
Confidence 45999999999999999887764 99999999987 6889999998 8999999999999986 3578999999998
Q ss_pred CCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCCC--CCCccEEEEEEEEc
Q 021710 97 SETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPS--GRPQGKIRVKLVLN 149 (308)
Q Consensus 97 ~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~s--g~~~G~L~v~v~~~ 149 (308)
...+|++||++.|+|.++..+ ...|++|.+.+ +...|+|+|+++|.
T Consensus 84 ~~~~~~~lG~~~i~l~~l~~~-------~~~w~~L~~~~~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 84 GDKPPDFLGKVAIPLLSIRDG-------QPNCYVLKNKDLEQAFKGVIYLEMDLI 131 (133)
T ss_dssp TTEEEEECCBCEEEGGGCCSS-------CCEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred CCCCCCeeEEEEEEHHHccCC-------CceEEEeecCCCCCccceEEEEEEEEE
Confidence 355789999999999998652 13899998754 34789999999885
No 4
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.85 E-value=2.3e-20 Score=155.78 Aligned_cols=129 Identities=19% Similarity=0.296 Sum_probs=100.6
Q ss_pred CcccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcC-----CceEEEEeecCCCCCCccccEEEEeeeCCCCCceEEEE
Q 021710 16 PITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDP-----AYRLATQSDDSGSTRPVWNERFTLPITHSVRESVLTLE 90 (308)
Q Consensus 16 ~~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~-----~~k~kT~v~k~gt~nP~WnE~f~f~l~~~~~~~~L~l~ 90 (308)
...+.|+|+|++|++|+..+..+. +||||++++.. ..+++|+++++ +.||+|||+|.|.+.. ....|.|+
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~--~dpyv~v~~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~--~~~~l~~~ 91 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGA--SDPYVRVTLYDPMNGVLTSVQTKTIKK-SLNPKWNEEILFRVHP--QQHRLLFE 91 (153)
T ss_dssp TTCEEEEEEEEEEESCC---------CCEEEEEEEEETTTEEEEEEECCCCSS-CSSCCCCEEEEEEECT--TTCEEEEE
T ss_pred CCccEEEEEEEEeeCCCCCCCCCC--CCcEEEEEEECCCCccceeeeCccccC-CCCCCCCCEEEEEecC--CCCEEEEE
Confidence 346899999999999999887764 99999999974 25889999998 8999999999999986 46789999
Q ss_pred EEeccCCCCCCceeeeEEEeCcccccCCCCC-CCceeEEEEEeCCC--CCCccEEEEEEEEcc
Q 021710 91 IFHSKLSETPKPLVGSVKFPLAHLVDSDSSE-PTQYVRKLEVLRPS--GRPQGKIRVKLVLNG 150 (308)
Q Consensus 91 V~d~~~~~~~d~lLG~~~ipL~~L~~~~~~~-~~~~~~~~~L~~~s--g~~~G~L~v~v~~~~ 150 (308)
|||++ ...++++||++.|+|.+|....... ......||.|...+ .+..|+|+|+++|.+
T Consensus 92 V~d~d-~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 92 VFDEN-RLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp EEECC-SSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred EEECC-CCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEeC
Confidence 99998 4568999999999999998754321 11235899997543 456899999999863
No 5
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.84 E-value=6.5e-21 Score=161.25 Aligned_cols=123 Identities=22% Similarity=0.374 Sum_probs=100.0
Q ss_pred CcccEEEEEEEEeecCCCCCCC------C--CCCCCcEEEEEEcCCceEEEEeecCCCCCCccccEEEEeeeCCCCCceE
Q 021710 16 PITHDLEITIICAKHLKNVNWR------N--GGDLKPYVVFYVDPAYRLATQSDDSGSTRPVWNERFTLPITHSVRESVL 87 (308)
Q Consensus 16 ~~~~~L~VtIisAk~L~~~~~~------~--~~~~dPYv~v~l~~~~k~kT~v~k~gt~nP~WnE~f~f~l~~~~~~~~L 87 (308)
...+.|+|+|++|++|+..++. + .+.+||||++.++...+.+|+++++ +.||+|||+|.|.+.. ...|
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~k-tlnP~WNE~F~f~v~~---~~~L 101 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQK-TNKPTYNEEFCANVTD---GGHL 101 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSS-CSSCEEEEEEEEEEEE---ECEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCC-CCCCccCcEEEEEcCC---CCEE
Confidence 3468999999999999987632 1 0148999999998766689999988 9999999999999975 4689
Q ss_pred EEEEEeccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCCCCCCccEEEEEEEEc
Q 021710 88 TLEIFHSKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPSGRPQGKIRVKLVLN 149 (308)
Q Consensus 88 ~l~V~d~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~sg~~~G~L~v~v~~~ 149 (308)
.|+|||++ ...+|++||++.|+|.+|...... ......||+|. ++|+|+|+++|.
T Consensus 102 ~~~V~D~d-~~~~dd~iG~~~i~l~~l~~~~~~-~~~~~~W~~L~-----~~G~i~l~l~~~ 156 (157)
T 2fk9_A 102 ELAVFHET-PLGYDHFVANCTLQFQELLRTTGA-SDTFEGWVDLE-----PEGKVFVVITLT 156 (157)
T ss_dssp EEEEEECC-SSSSCEEEEEEEEEHHHHHHHHTT-CSEEEEEEECB-----SSCEEEEEEEEC
T ss_pred EEEEEECC-CCCCCCEEEEEEEEHHHhhcccCC-CCcccEEEECC-----CCcEEEEEEEEE
Confidence 99999998 466899999999999999864111 01457999994 389999999984
No 6
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.84 E-value=4.3e-20 Score=158.10 Aligned_cols=129 Identities=19% Similarity=0.298 Sum_probs=99.4
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcCC-----ceEEEEeecCCCCCCccccEEEEeeeCCCCCceEEEEE
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDPA-----YRLATQSDDSGSTRPVWNERFTLPITHSVRESVLTLEI 91 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~~-----~k~kT~v~k~gt~nP~WnE~f~f~l~~~~~~~~L~l~V 91 (308)
..++|+|+|++|++|+..+..+. +||||++++... .+++|+++++ +.||+|||+|.|.+.. ....|.|+|
T Consensus 6 ~~g~L~V~v~~a~~L~~~d~~g~--~DPyv~v~l~~~~~~~~~~~kT~v~~~-t~nP~Wne~f~f~v~~--~~~~L~~~V 80 (176)
T 3m7f_B 6 DTRVVRVKVIAGIGLAKKDILGA--SDPYVRVTLYDPMSGILTSVQTKTIKK-SLNPKWNEEILFRVLP--QRHRILFEV 80 (176)
T ss_dssp TCEEEEEEEEEEESCC---CCCC--CCEEEEEEEEETTTEEEEEEECCCCSS-CSSCEEEEEEEEEECT--TTCEEEEEE
T ss_pred CcEEEEEEEEEeeCCCCcCCCCC--cCcEEEEEEECCCCCcccceeCceECC-CCCCcccceEEEEEcC--CCCEEEEEE
Confidence 45899999999999999888765 999999999742 5789999998 9999999999999986 357899999
Q ss_pred EeccCCCCCCceeeeEEEeCcccccCCCCC-CCceeEEEEEeCC--CCCCccEEEEEEEEccC
Q 021710 92 FHSKLSETPKPLVGSVKFPLAHLVDSDSSE-PTQYVRKLEVLRP--SGRPQGKIRVKLVLNGR 151 (308)
Q Consensus 92 ~d~~~~~~~d~lLG~~~ipL~~L~~~~~~~-~~~~~~~~~L~~~--sg~~~G~L~v~v~~~~~ 151 (308)
||++ ...+++|||++.|+|.+|....... ......||.|... .++..|+|+|+|.|.+.
T Consensus 81 ~d~d-~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 81 FDEN-RLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp EECC-----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred EECC-CCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 9998 3568999999999999998754321 0122379999753 34568999999999876
No 7
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.84 E-value=1.8e-20 Score=160.78 Aligned_cols=127 Identities=21% Similarity=0.288 Sum_probs=102.5
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcCCceEEEEeecCCCCCCccccEEEEeeeCCCCCceEEEEEEeccC
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDPAYRLATQSDDSGSTRPVWNERFTLPITHSVRESVLTLEIFHSKL 96 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~~~k~kT~v~k~gt~nP~WnE~f~f~l~~~~~~~~L~l~V~d~~~ 96 (308)
....|+|+|++|++|...+..++ +||||+|+++. .+.+|+++++ +.||+|||+|.|.+.. ...|.|+|||++
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~--sDPYv~v~~~~-~~~kT~v~~~-tlnP~Wne~f~f~v~~---~~~L~~~V~D~d- 105 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFG--PSPYVEVTVDG-QSKKTEKCNN-TNSPKWKQPLTVIVTP---VSKLHFRVWSHQ- 105 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCC--CCEEEEEEETT-EEEECCCCSS-CSSCEEEEEEEEEECT---TCEEEEEEEECC-
T ss_pred CceEEEEEEEEeECCCCcccCCC--CCeEEEEEECC-EEeEccccCC-CCCCeECCEEEEEeCC---CCEEEEEEEECC-
Confidence 45889999999999995544444 99999999987 8999999998 9999999999999853 678999999998
Q ss_pred CCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCCC--CCCccEEEEEEEEccC
Q 021710 97 SETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPS--GRPQGKIRVKLVLNGR 151 (308)
Q Consensus 97 ~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~s--g~~~G~L~v~v~~~~~ 151 (308)
....|++||++.|+|.+|........+....|++|...+ .+..|+|.|+|.+...
T Consensus 106 ~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 106 TLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp SSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEEC
T ss_pred CCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeec
Confidence 356889999999999999764332111236799998753 3358999999988754
No 8
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.83 E-value=1.5e-20 Score=154.22 Aligned_cols=120 Identities=23% Similarity=0.417 Sum_probs=99.7
Q ss_pred ccEEEEEEEEeecCCCCCCCCC---------CCCCcEEEEEEcCCceEEEEeecCCCCCCccccEEEEeeeCCCCCceEE
Q 021710 18 THDLEITIICAKHLKNVNWRNG---------GDLKPYVVFYVDPAYRLATQSDDSGSTRPVWNERFTLPITHSVRESVLT 88 (308)
Q Consensus 18 ~~~L~VtIisAk~L~~~~~~~~---------~~~dPYv~v~l~~~~k~kT~v~k~gt~nP~WnE~f~f~l~~~~~~~~L~ 88 (308)
.+.|+|+|++|++|+..+..++ +.+||||+++++...+.+|+++++ +.||+|||+|.|.+... ..|.
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~-t~nP~WnE~f~f~v~~~---~~L~ 80 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQK-TNSPAWHDEFVTDVCNG---RKIE 80 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSS-CSSCEEEEEEEEEEEEE---CEEE
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECC-CcCCccCCEEEEEecCC---CEEE
Confidence 4899999999999998764321 138999999998766679999888 99999999999999762 7899
Q ss_pred EEEEeccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCCCCCCccEEEEEEEEcc
Q 021710 89 LEIFHSKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPSGRPQGKIRVKLVLNG 150 (308)
Q Consensus 89 l~V~d~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~sg~~~G~L~v~v~~~~ 150 (308)
|+|||++ ...+|++||++.|+|.++...... ....|+.|. ++|+|+|+++|..
T Consensus 81 ~~V~d~d-~~~~dd~iG~~~i~l~~l~~~~~~---~~~~w~~L~-----~~G~i~l~l~~~~ 133 (136)
T 1gmi_A 81 LAVFHDA-PIGYDDFVANCTIQFEELLQNGSR---HFEDWIDLE-----PEGKVYVIIDLSG 133 (136)
T ss_dssp EEEEECC-SSSSCEEEEEEEEEHHHHTSTTCS---EEEEEEECB-----SSCEEEEEEEEEE
T ss_pred EEEEeCC-CCCCCCEEEEEEEEHHHhcccCCC---CccEEEEcC-----CCeEEEEEEEEEe
Confidence 9999998 356899999999999999875322 346899884 4899999999864
No 9
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.83 E-value=1.1e-19 Score=150.85 Aligned_cols=119 Identities=18% Similarity=0.351 Sum_probs=101.3
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcCCceEEEEeecCCCCCCccccEEEEeeeCCCCCceEEEEEEeccCC
Q 021710 18 THDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDPAYRLATQSDDSGSTRPVWNERFTLPITHSVRESVLTLEIFHSKLS 97 (308)
Q Consensus 18 ~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~~~k~kT~v~k~gt~nP~WnE~f~f~l~~~~~~~~L~l~V~d~~~~ 97 (308)
.+.|+|+|++|++|...+..+. +||||++.++. .+.+|+++++ +.||+|||+|.|.+... ...|.|+|||++..
T Consensus 16 ~~~L~V~v~~a~~L~~~d~~g~--~dpyv~v~~~~-~~~kT~~~~~-t~nP~Wne~f~f~v~~~--~~~l~~~v~d~d~~ 89 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAKDKTGS--SDPYVTVQVGK-TKKRTKTIYG-NLNPVWEENFHFECHNS--SDRIKVRVLDEDDD 89 (148)
T ss_dssp CEEEEEEEEEEESCCCCSTTSC--CCEEEEEEETT-EEEECCCCCS-CSSCEEEEEEEEEECST--TCEEEEEEEECCCS
T ss_pred ccEEEEEEEeeeCCCCCCCCCC--cCeEEEEEECC-EEEECCccCC-CCCCCcccEEEEEecCC--CCEEEEEEEECCCC
Confidence 5899999999999999887764 99999999976 7899999998 89999999999999763 57899999999831
Q ss_pred ----------CCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCCC--CCCccEEEEEEEEc
Q 021710 98 ----------ETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPS--GRPQGKIRVKLVLN 149 (308)
Q Consensus 98 ----------~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~s--g~~~G~L~v~v~~~ 149 (308)
...+++||++.|+|.++.. ....|++|.... .+..|+|+|+|+|.
T Consensus 90 ~~~~~~~~~~~~~~~~lG~~~i~l~~l~~-------~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 90 IKSRVKQRFKRESDDFLGQTIIEVRTLSG-------EMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHHHHTTTSSCSSEEEEEEEEEGGGCCS-------EEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred ccccccccccCCCCccEEEEEEEHHHCcC-------CCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 1589999999999999832 346899998543 34679999999985
No 10
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.82 E-value=1.3e-19 Score=147.71 Aligned_cols=122 Identities=18% Similarity=0.346 Sum_probs=98.8
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcC-CceEEEEeecCCCCCCccccEEEEeeeCCCCCceEEEEEEecc
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDP-AYRLATQSDDSGSTRPVWNERFTLPITHSVRESVLTLEIFHSK 95 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~-~~k~kT~v~k~gt~nP~WnE~f~f~l~~~~~~~~L~l~V~d~~ 95 (308)
+...|+|+|++|++|+..+..+. +||||+++++. ..+++|+++++ +.||+|||+|.|.+... ..|.|+|||++
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~--sDpyv~v~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~---~~l~~~v~d~d 76 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRL--PDPFAKIVVDGSGQCHSTDTVKN-TLDPKWNQHYDLYVGKT---DSITISVWNHK 76 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCC--CCEEEEEEETTTCCEEECCCCSS-CSSCEEEEEEEEEEETT---CCEEEEEEEGG
T ss_pred CeEEEEEEEEEeECCCCCCCCCC--cCeEEEEEECCCCceEECCccCC-CCCCCccCEEEEEeCCC---CEEEEEEEECC
Confidence 45789999999999999888765 99999999975 47899999988 99999999999999763 35999999998
Q ss_pred CCCCC---CceeeeEEEeCcccccCCCCCCCceeEEEEEeCCC--C--CCccEEEEEEEEc
Q 021710 96 LSETP---KPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPS--G--RPQGKIRVKLVLN 149 (308)
Q Consensus 96 ~~~~~---d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~s--g--~~~G~L~v~v~~~ 149 (308)
. ..+ |+|||++.|+|.+|...... ...|++|.... + +..|+|.|+|..+
T Consensus 77 ~-~~~~~~d~~lG~~~i~l~~l~~~~~~----~~~~~~L~~~~~~~~~~~~G~i~v~l~~r 132 (132)
T 3pyc_A 77 K-IHKKQGAGFLGCVRLLSNAISRLKDT----GYQRLDLCKLNPSDTDAVRGQIVVSLQTR 132 (132)
T ss_dssp G-TTSSTTTTEEEEEEECHHHHHHHTTS----CCEEEECBCSSTTCCCCCCSEEEEEEEEC
T ss_pred C-CCCCCCCCceEEEEEeHHHhhccccc----CcEEEeeeecCCCCCCceeEEEEEEEEcC
Confidence 4 333 78999999999998443222 24788887542 2 3489999999864
No 11
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.81 E-value=3.8e-19 Score=143.34 Aligned_cols=116 Identities=16% Similarity=0.354 Sum_probs=93.0
Q ss_pred ccEEEEEEEEeecCCCC---CCCCCCCCCcEEEEEEcC--CceEEEEeecCCCCCCccccEEEEeeeCCCCCceEEEEEE
Q 021710 18 THDLEITIICAKHLKNV---NWRNGGDLKPYVVFYVDP--AYRLATQSDDSGSTRPVWNERFTLPITHSVRESVLTLEIF 92 (308)
Q Consensus 18 ~~~L~VtIisAk~L~~~---~~~~~~~~dPYv~v~l~~--~~k~kT~v~k~gt~nP~WnE~f~f~l~~~~~~~~L~l~V~ 92 (308)
.+.|+|+|++|++|+.. +..+ .+||||++++.+ ..+++|+++++ +.||+|||+|.|.+... ....|.|+||
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g--~~dpyv~v~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~-~~~~l~i~V~ 77 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLD--TPDPYVELFISTTPDSRKRTRHFNN-DINPVWNETFEFILDPN-QENVLEITLM 77 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHC--CCCEEEEEECTTSTTCCEECCCCTT-CSSCEEEEEEEEEECTT-SCCEEEEEEE
T ss_pred CcEEEEEEEeeeCCCCCCccccCC--CCCCEEEEEEccCCCceEEccccCC-CCCCcccceEEEEecCC-CCCEEEEEEE
Confidence 37899999999999984 4444 499999999986 37899999998 89999999999999653 4678999999
Q ss_pred eccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCCCCCCccEEEEEEE
Q 021710 93 HSKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPSGRPQGKIRVKLV 147 (308)
Q Consensus 93 d~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~sg~~~G~L~v~v~ 147 (308)
|++. . ++++||++.|+|.+|..+. ....|++|.. ...|.|+|++.
T Consensus 78 d~d~-~-~~~~iG~~~i~l~~l~~~~-----~~~~~~~L~~---~~~g~i~~~le 122 (126)
T 1rlw_A 78 DANY-V-MDETLGTATFTVSSMKVGE-----KKEVPFIFNQ---VTEMVLEMSLE 122 (126)
T ss_dssp ECCS-S-CCEEEEEEEEEGGGSCTTC-----EEEEEEEETT---TEEEEEEEEEE
T ss_pred ECCC-C-CCceeEEEEEEHHHccCCC-----cEEEEEEcCC---CceEEEEEEEE
Confidence 9983 3 5899999999999997532 4568999953 23445554443
No 12
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.77 E-value=2.2e-18 Score=143.33 Aligned_cols=106 Identities=24% Similarity=0.364 Sum_probs=90.7
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcC----CceEEEEeecCCCCCCccccEEEEeeeCCCCCceEEEEEEe
Q 021710 18 THDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDP----AYRLATQSDDSGSTRPVWNERFTLPITHSVRESVLTLEIFH 93 (308)
Q Consensus 18 ~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~----~~k~kT~v~k~gt~nP~WnE~f~f~l~~~~~~~~L~l~V~d 93 (308)
.+.|+|+|++|++|...+..+. +||||++++.+ ..+.+|+++++ +.||+|||+|.|.+........|.|+|||
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~--~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~~~~~L~i~V~d 106 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGL--SDPYVKLKLIPDPKSESKQKTKTIKC-SLNPEWNETFRFQLKESDKDRRLSVEIWD 106 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSC--CCEEEEEEEESCTTCSSCEECCCCSS-CSSCEEEEEEEEECCSGGGGCEEEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCCCCC--cCeEEEEEEECCCCCcceEecceeCC-CCCCcCCcEEEEEeccccCCCEEEEEEEE
Confidence 4789999999999999887764 99999999974 46899999998 99999999999998763234689999999
Q ss_pred ccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeC
Q 021710 94 SKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLR 133 (308)
Q Consensus 94 ~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~ 133 (308)
++. ..++++||++.|+|.+|... ....||+|..
T Consensus 107 ~d~-~~~~~~iG~~~i~l~~l~~~------~~~~W~~L~~ 139 (149)
T 1a25_A 107 WDL-TSRNDFMGSLSFGISELQKA------GVDGWFKLLS 139 (149)
T ss_dssp CCS-SSCCEEEEEEEEEHHHHTTC------CEEEEEECBC
T ss_pred CCC-CCCCCEEEEEEEEHHHhCcC------ccCCeEEccC
Confidence 983 56899999999999999764 2468999975
No 13
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=6.4e-18 Score=139.08 Aligned_cols=109 Identities=20% Similarity=0.326 Sum_probs=90.8
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcC--CceEEEEeecCCCCCCccccEEEEeeeC--CCCCceEEEEEE
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDP--AYRLATQSDDSGSTRPVWNERFTLPITH--SVRESVLTLEIF 92 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~--~~k~kT~v~k~gt~nP~WnE~f~f~l~~--~~~~~~L~l~V~ 92 (308)
..+.|+|+|++|++|+..+..+. +||||++++.+ ..+++|+++++ +.||+|||+|.|.+.. .+....|.|+||
T Consensus 24 ~~~~L~v~v~~a~~L~~~d~~g~--~dpyv~v~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 100 (141)
T 2d8k_A 24 QESTLTVKIMKAQELPAKDFSGT--SDPFVKIYLLPDKKHKLETKVKRK-NLNPHWNETFLFEGFPYEKVVQRILYLQVL 100 (141)
T ss_dssp SSCCEEEEEEEEESCCCCSSSSC--CCEEEEEEEESCCSSEEECCCCTT-CSSCCCCEEEEECSCCHHHHTTSEEEEEEE
T ss_pred CCCEEEEEEEEeECCCCCCCCCC--CCcEEEEEEECCCCccEeCceEcC-CCCCccccEEEECccCHHHcccCEEEEEEE
Confidence 35889999999999999887764 99999999953 46899999988 9999999999998532 123578999999
Q ss_pred eccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCC
Q 021710 93 HSKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRP 134 (308)
Q Consensus 93 d~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~ 134 (308)
|++ ...++++||++.|+|.+|.... ....|++|...
T Consensus 101 d~d-~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~ 136 (141)
T 2d8k_A 101 DYD-RFSRNDPIGEVSIPLNKVDLTQ-----MQTFWKDLKPS 136 (141)
T ss_dssp ECC-SSSSCEEEEEEEEETTTSCTTS-----CEEEEECCEEC
T ss_pred ECC-CCCCCcEEEEEEEEhhhhcCCC-----CccEEEECcCC
Confidence 998 3568899999999999997643 34689999754
No 14
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.75 E-value=4.4e-18 Score=138.84 Aligned_cols=108 Identities=24% Similarity=0.349 Sum_probs=91.4
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEc----CCceEEEEeecCCCCCCccccEEEEeeeCCCCCceEEEEEE
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVD----PAYRLATQSDDSGSTRPVWNERFTLPITHSVRESVLTLEIF 92 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~----~~~k~kT~v~k~gt~nP~WnE~f~f~l~~~~~~~~L~l~V~ 92 (308)
..+.|+|+|++|++|+..+..+. +||||++++. ...+.+|+++++ +.||+|||+|.|.+........|.|+||
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~--~dpyv~v~~~~~~~~~~~~kT~~~~~-t~nP~wne~f~f~~~~~~~~~~l~i~v~ 90 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGL--SDPYVKLKLIPDPKNESKQKTKTIRS-TLNPQWNESFTFKLKPSDKDRRLSVEIW 90 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSC--CCEEEEEEEECCTTCCCCEECCCCCS-CSSCEEEEEEEEECCGGGGGCEEEEEEE
T ss_pred cCCEEEEEEEEeeCCCCCCCCCC--CCeeEEEEEEcCCCCCeeecCceEcC-CCCCCcccEEEEEcCchhcCCEEEEEEE
Confidence 35899999999999999887764 9999999995 246899999998 8999999999999875323468999999
Q ss_pred eccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCC
Q 021710 93 HSKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRP 134 (308)
Q Consensus 93 d~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~ 134 (308)
|++ ...++++||++.|+|++|.... ...||+|...
T Consensus 91 d~d-~~~~~~~iG~~~i~l~~l~~~~------~~~W~~L~~~ 125 (137)
T 3rdl_A 91 DWD-RTTRNDFMGSLSFGVSELMKMP------ASGWYKLLNQ 125 (137)
T ss_dssp ECC-SSSCCEEEEEEEEEHHHHHHSC------EEEEEECBCH
T ss_pred ECC-CCCCCceEEEEEEeHHHhccCc------cCceEECcCc
Confidence 998 3568999999999999997642 3689999753
No 15
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.75 E-value=6.3e-18 Score=138.52 Aligned_cols=107 Identities=21% Similarity=0.334 Sum_probs=88.5
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcC----CceEEEEeecCCCCCCccccEEEEe-eeCC-CCCceEEEE
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDP----AYRLATQSDDSGSTRPVWNERFTLP-ITHS-VRESVLTLE 90 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~----~~k~kT~v~k~gt~nP~WnE~f~f~-l~~~-~~~~~L~l~ 90 (308)
..+.|+|+|++|++|+. +..+ .+||||++++.+ ..+.+|+++++ +.||+|||+|.|. +... +....|.|+
T Consensus 18 ~~~~L~V~V~~a~~L~~-~~~g--~~DPyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wnE~f~f~~v~~~~l~~~~L~~~ 93 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVT-EDGA--DPNPYVKTYLLPDTHKTSKRKTKISRK-TRNPTFNEMLVYSGYSKETLRQRELQLS 93 (134)
T ss_dssp ETTEEEEEEEEEECCCC-TTSC--CCCEEEEEEEESCSSSCCCEECCCCCS-CSSCEEEEEEEEESCCHHHHTTCEEEEE
T ss_pred cCCEEEEEEEEeeCCCC-CCCC--CCCeEEEEEEEcCCCCCceecCCcCcC-CCCCCCccEEEECCcCHHHhCcCEEEEE
Confidence 35899999999999996 5444 499999999942 36899999998 9999999999999 7642 245789999
Q ss_pred EEeccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeC
Q 021710 91 IFHSKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLR 133 (308)
Q Consensus 91 V~d~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~ 133 (308)
|||++ ...++++||++.|+|.++..+. ....||+|..
T Consensus 94 V~d~d-~~~~~~~lG~~~i~l~~l~~~~-----~~~~W~~L~~ 130 (134)
T 2b3r_A 94 VLSAE-SLRENFFLGGITLPLKDFNLSK-----ETVKWYQLTA 130 (134)
T ss_dssp EEECC-SSSCCEEEEEEEEEGGGSCTTS-----CEEEEEECBC
T ss_pred EEECC-CCCCCcEEEEEEEEhhhccCCC-----CcceeEECCC
Confidence 99998 4567899999999999997643 3468999964
No 16
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.75 E-value=4.4e-18 Score=140.27 Aligned_cols=108 Identities=19% Similarity=0.338 Sum_probs=90.6
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcC--CceEEEEeecCCCCCCccccEEEEeeeCC-CCCceEEEEEEe
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDP--AYRLATQSDDSGSTRPVWNERFTLPITHS-VRESVLTLEIFH 93 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~--~~k~kT~v~k~gt~nP~WnE~f~f~l~~~-~~~~~L~l~V~d 93 (308)
..+.|+|+|++|++|+..+..+. +||||++++.+ ..+++|+++++ +.||+|||+|.|.+... +....|.|+|||
T Consensus 32 ~~~~L~v~v~~a~~L~~~d~~g~--~dpyv~v~l~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 108 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPALDMGGT--SDPYVKVFLLPDKKKKFETKVHRK-TLNPVFNEQFTFKVPYSELGGKTLVMAVYD 108 (143)
T ss_dssp TTTEEEEEEEEEECCCCBGGGBC--CCEEEEEEEESCCSCCEECCCCCS-CSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCCCCCCC--cCcEEEEEEECCCCccEECccCcC-CCCCcCcCeEEEeecHhhcCCCEEEEEEEe
Confidence 45899999999999999887664 99999999943 46899999998 89999999999998742 235789999999
Q ss_pred ccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeC
Q 021710 94 SKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLR 133 (308)
Q Consensus 94 ~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~ 133 (308)
++ ...++++||++.|+|.+|.... ....|++|..
T Consensus 109 ~d-~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~ 142 (143)
T 3f04_A 109 FD-RFSKHDIIGEFKVPMNTVDFGH-----VTEEWRDLQS 142 (143)
T ss_dssp CC-SSSCCEEEEEEEEEGGGCCTTS-----CEEEEEECBC
T ss_pred CC-CCCCCceEEEEEEEHHHccCCC-----CcceEEECcC
Confidence 98 3568999999999999997643 3468999863
No 17
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.75 E-value=6.4e-18 Score=141.05 Aligned_cols=108 Identities=19% Similarity=0.338 Sum_probs=90.7
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcC--CceEEEEeecCCCCCCccccEEEEeeeCC-CCCceEEEEEEe
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDP--AYRLATQSDDSGSTRPVWNERFTLPITHS-VRESVLTLEIFH 93 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~--~~k~kT~v~k~gt~nP~WnE~f~f~l~~~-~~~~~L~l~V~d 93 (308)
..+.|+|+|++|++|...+..+. +||||++++.+ ..+++|+++++ +.||+|||+|.|.+... +....|.|+|||
T Consensus 40 ~~~~L~V~v~~a~~L~~~d~~g~--~dpyv~v~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 116 (152)
T 1rsy_A 40 QNNQLLVGIIQAAELPALDMGGT--SDPYVKVFLLPDKKKKFETKVHRK-TLNPVFNEQFTFKVPYSELGGKTLVMAVYD 116 (152)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSC--CCEEEEEEEETTCCSCEECCCCTT-CSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred CCCEEEEEEEEeECCCCccCCCC--cCeEEEEEEEcCCCceEeccccCC-CCCCcCcccEEEeecHHHcCCCEEEEEEEE
Confidence 35799999999999999887664 99999999953 36889999998 89999999999998642 235789999999
Q ss_pred ccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeC
Q 021710 94 SKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLR 133 (308)
Q Consensus 94 ~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~ 133 (308)
++ ...++++||++.|+|.++..+. ....|++|..
T Consensus 117 ~d-~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~ 150 (152)
T 1rsy_A 117 FD-RFSKHDIIGEFKVPMNTVDFGH-----VTEEWRDLQS 150 (152)
T ss_dssp CC-SSSCCEEEEEEEEEGGGCCCSS-----CEEEEEECBC
T ss_pred CC-CCCCCcEEEEEEEEchhccCCC-----CcceEEECCC
Confidence 98 3568999999999999986543 3468999974
No 18
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.75 E-value=2.2e-18 Score=145.14 Aligned_cols=108 Identities=19% Similarity=0.267 Sum_probs=90.1
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcC---C--ceEEEEeecCCCCCCccccEEEEeeeCC-CCCceEEEE
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDP---A--YRLATQSDDSGSTRPVWNERFTLPITHS-VRESVLTLE 90 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~---~--~k~kT~v~k~gt~nP~WnE~f~f~l~~~-~~~~~L~l~ 90 (308)
..+.|+|+|++|++|...+..+. +||||++++.+ . .++||+++++ +.||+|||+|.|.+... +....|.|+
T Consensus 41 ~~~~L~V~Vi~a~~L~~~d~~g~--sDPyVkv~l~~~~~~~~~~~kT~v~~~-tlnP~wnE~F~f~v~~~~l~~~~L~~~ 117 (155)
T 2z0u_A 41 KNKQFAILIIQLSNLSALLQQQD--QKVNIRVAVLPCSESTTCLFRTRPLDA-SDTLVFNEVFWVSMSYPALHQKTLRVD 117 (155)
T ss_dssp TTTEEEEEEEEEECGGGTCCSCC--SEEEEEEEEESCSCHHHHEEECCCEEC-CSSEEEEEEEEEECCHHHHHHCEEEEE
T ss_pred CCCEEEEEEEEccCcCCcccCCC--CCEEEEEEEecCCCCCccceeCCcCCC-CCCCccccEEEEEcCHHHhCcCEEEEE
Confidence 35899999999999999887664 99999999965 2 3899999998 99999999999998742 235689999
Q ss_pred EEeccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEe
Q 021710 91 IFHSKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVL 132 (308)
Q Consensus 91 V~d~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~ 132 (308)
|||++ ...++++||++.|+|.++..... ....||.|.
T Consensus 118 V~d~d-~~~~~d~iG~~~i~l~~l~~~~~----~~~~W~~L~ 154 (155)
T 2z0u_A 118 VCTTD-RSHLEECLGGAQISLAEVCRSGE----RSTRWYNLL 154 (155)
T ss_dssp EEEEC-TTSCEEEEEEEEEECTTSCTTCC----CEEEEEEEB
T ss_pred EEECC-CCCCCcEEEEEEEEHHHccCCCC----ccccceEcc
Confidence 99998 46789999999999999863221 346899985
No 19
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.74 E-value=3.9e-18 Score=142.63 Aligned_cols=110 Identities=20% Similarity=0.303 Sum_probs=88.9
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcC----CceEEEEeecCCCCCCccccEEEEeeeCCCCCceEEEEEE
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDP----AYRLATQSDDSGSTRPVWNERFTLPITHSVRESVLTLEIF 92 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~----~~k~kT~v~k~gt~nP~WnE~f~f~l~~~~~~~~L~l~V~ 92 (308)
..+.|+|+|++|++|...+ .+ .+||||++++.+ ..+.+|+++++ +.||+|||+|.|.+........|.|+||
T Consensus 25 ~~~~L~V~v~~a~~L~~~d-~g--~~Dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~~~~~L~i~V~ 100 (153)
T 3fbk_A 25 QDRVLLLHIIEGKGLISKQ-PG--TCDPYVKISLIPEDSRLRHQKTQTVPD-CRDPAFHEHFFFPVQEEDDQKRLLVTVW 100 (153)
T ss_dssp SSSEEEEEEEEEESCCCCS-SS--CCCEEEEEEEESCSCCTTCEECCCCTT-CSSCEEEEEEEEECCGGGTTSEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCC-CC--CCCEEEEEEEEcCCCCccEEeccccCC-CCCCccccEEEEecccHHhCCEEEEEEE
Confidence 4589999999999999888 44 599999999943 35899999998 9999999999999854323356999999
Q ss_pred eccCCCCC-CceeeeEEEeCcccccCCCCCCCceeEEEEEeCCC
Q 021710 93 HSKLSETP-KPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPS 135 (308)
Q Consensus 93 d~~~~~~~-d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~s 135 (308)
|++. ..+ |++||++.|+|.+|..... ....||.|....
T Consensus 101 d~d~-~~~~d~~lG~~~i~l~~l~~~~~----~~~~W~~L~~~~ 139 (153)
T 3fbk_A 101 NRAS-QSRQSGLIGCMSFGVKSLLTPDK----EISGWYYLLGEH 139 (153)
T ss_dssp ECCS-SGGGCEEEEEEEEEHHHHTC--C----CEEEEEECBCTT
T ss_pred eCCC-CCCCCcEEEEEEEEHHHhcCCCC----ccccEEECCChh
Confidence 9983 444 8999999999999975221 346899998654
No 20
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.74 E-value=6.9e-18 Score=138.34 Aligned_cols=107 Identities=21% Similarity=0.336 Sum_probs=89.0
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcC----CceEEEEeecCCCCCCccccEEEEee-eC-CCCCceEEEEE
Q 021710 18 THDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDP----AYRLATQSDDSGSTRPVWNERFTLPI-TH-SVRESVLTLEI 91 (308)
Q Consensus 18 ~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~----~~k~kT~v~k~gt~nP~WnE~f~f~l-~~-~~~~~~L~l~V 91 (308)
.+.|+|+|++|++|...+..+. +||||++++.+ ..+++|+++++ +.||+|||+|.|.+ .. .+....|.|+|
T Consensus 20 ~~~L~v~v~~a~~L~~~d~~g~--~dpyv~v~~~~~~~~~~~~kT~~~~~-t~nP~wne~f~f~~~~~~~~~~~~l~i~V 96 (141)
T 1v27_A 20 GHQLIVTILGAKDLPSREDGRP--RNPYVKIYFLPDRSDKNKRRTKTVKK-TLEPKWNQTFIYSPVHRREFRERMLEITL 96 (141)
T ss_dssp TTEEEEEEEEEESCCCCSSSCC--CCEEEECCCSSCCSSSSCCBCCCCSS-CSSCCCCCCCEECSCCTTGGGTCEEEEEE
T ss_pred CCEEEEEEEEccCCCCcCCCCC--CCCEEEEEEecCCCCCcceeCccccC-CCCCccccEEEEccCCHHHhcCCEEEEEE
Confidence 4889999999999999887764 99999999942 46889999998 99999999999995 32 23457899999
Q ss_pred EeccCCCCC--CceeeeEEEeCcccccCCCCCCCceeEEEEEeCC
Q 021710 92 FHSKLSETP--KPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRP 134 (308)
Q Consensus 92 ~d~~~~~~~--d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~ 134 (308)
||++. ... +++||++.|+|.++.... ...||+|...
T Consensus 97 ~d~d~-~~~~~~~~lG~~~i~l~~l~~~~------~~~W~~L~~~ 134 (141)
T 1v27_A 97 WDQAR-VREEESEFLGEILIELETALLDD------EPHWYKLQTH 134 (141)
T ss_dssp EEBCS-SSSCCBCCCEEEEEEGGGCCCSS------EEEEEECBCC
T ss_pred EECCC-CcCCCCceEEEEEEEccccCCCC------CCceEECccc
Confidence 99983 444 899999999999986532 3689999864
No 21
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.73 E-value=1.5e-17 Score=134.38 Aligned_cols=105 Identities=23% Similarity=0.365 Sum_probs=84.7
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcC----CceEEEEeecCCCCCCccccEEEEeeeC--CCCCceEEEEE
Q 021710 18 THDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDP----AYRLATQSDDSGSTRPVWNERFTLPITH--SVRESVLTLEI 91 (308)
Q Consensus 18 ~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~----~~k~kT~v~k~gt~nP~WnE~f~f~l~~--~~~~~~L~l~V 91 (308)
.+.|+|+|++|++|...+..+. +||||++++.+ ..+.+|+++++ +.||+|||+|.|.+.. .+....|.|+|
T Consensus 17 ~~~L~v~v~~a~~L~~~d~~~~--~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~~~~~~~~~~~l~~~V 93 (129)
T 2bwq_A 17 GHQLIVTILGAKDLPSREDGRP--RNPYVKIYFLPDRSDKNKRRTKTVKK-TLEPKWNQTFIYSPVHRREFRERMLEITL 93 (129)
T ss_dssp TTEEEEEEEEEESCCCCTTSCC--BCEEEEEEEESSCSGGGEEECCCCSS-BSSCEEEEEEEECSCCGGGGGGCEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCCCCC--CCCEEEEEEecCCCCCcceecccccC-CCCCccccEEEEccCCHHHhcCCeEEEEE
Confidence 4899999999999999887764 99999999932 47899999998 9999999999999532 23457899999
Q ss_pred EeccCCCCC--CceeeeEEEeCcccccCCCCCCCceeEEEEEe
Q 021710 92 FHSKLSETP--KPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVL 132 (308)
Q Consensus 92 ~d~~~~~~~--d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~ 132 (308)
||++. ... +++||++.|+|.++.... ...||+|.
T Consensus 94 ~d~d~-~~~~~~~~lG~~~i~l~~l~~~~------~~~W~~Lq 129 (129)
T 2bwq_A 94 WDQAR-VREEESEFLGEILIELETALLDD------EPHWYKLQ 129 (129)
T ss_dssp EEC--------CEEEEEEEEEGGGCCCSS------CEEEEECC
T ss_pred EECCc-CcCcCCceeEEEEEEccccCCCc------CCccEECc
Confidence 99983 444 899999999999987642 35899883
No 22
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.73 E-value=1.3e-17 Score=136.60 Aligned_cols=118 Identities=18% Similarity=0.263 Sum_probs=81.9
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcCCceEEEEeecCCCCCCccccEEEEeeeCCCCCceEEEEEEeccCCC
Q 021710 19 HDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDPAYRLATQSDDSGSTRPVWNERFTLPITHSVRESVLTLEIFHSKLSE 98 (308)
Q Consensus 19 ~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~~~k~kT~v~k~gt~nP~WnE~f~f~l~~~~~~~~L~l~V~d~~~~~ 98 (308)
+.|.|+|++|++|.. .+ .+||||+++. ...+|+++++++.||+|||+|.|.+.. ....|.|+|||++ .
T Consensus 5 ~~L~V~V~~A~~l~~---~g--~~DPYv~v~~---~~~kt~~~~~~t~nP~WnE~f~f~v~~--~~~~L~~~V~D~d--~ 72 (131)
T 2cjt_A 5 SLLCVGVKKAKFDGA---QE--KFNTYVTLKV---QNVKSTTIAVRGSQPSWEQDFMFEINR--LDLGLTVEVWNKG--L 72 (131)
T ss_dssp EEEEEEEEEEECSSC---GG--GCEEEEEEEE---TTEEEECCCEESSSCEEEEEEEEEECC--CSSEEEEEEEECC--S
T ss_pred eEEEEEEEEeECCCC---CC--CcCeEEEEEe---cCEEEeEecCCCCCceECCEEEEEEeC--CCCeEEEEEEECC--C
Confidence 689999999998852 33 4999999992 345666665448999999999999986 3567999999998 4
Q ss_pred CCCceeeeEEEeCcccccCCCCC-CCceeEEEEEeCCCCCCccE-------EEEEEEE
Q 021710 99 TPKPLVGSVKFPLAHLVDSDSSE-PTQYVRKLEVLRPSGRPQGK-------IRVKLVL 148 (308)
Q Consensus 99 ~~d~lLG~~~ipL~~L~~~~~~~-~~~~~~~~~L~~~sg~~~G~-------L~v~v~~ 148 (308)
..|++||++.|+|++|....... ......|+.+..++|+.+|+ |.+.++|
T Consensus 73 ~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 73 IWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp SCEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEE
T ss_pred CCCCeEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEEe
Confidence 58999999999999987643211 01223556666566776665 7777776
No 23
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.73 E-value=1.4e-17 Score=142.00 Aligned_cols=108 Identities=19% Similarity=0.272 Sum_probs=89.9
Q ss_pred cccEEEEEEEEeecCCCCCC-CCCCCCCcEEEEEEcCC----ceEEEEeecCCCCCCccccEEEEeeeCCCCCceEEEEE
Q 021710 17 ITHDLEITIICAKHLKNVNW-RNGGDLKPYVVFYVDPA----YRLATQSDDSGSTRPVWNERFTLPITHSVRESVLTLEI 91 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~-~~~~~~dPYv~v~l~~~----~k~kT~v~k~gt~nP~WnE~f~f~l~~~~~~~~L~l~V 91 (308)
..+.|+|+|++|++|...+. .+ .+||||++++... .+++|+++++ +.||+|||+|.|.+.. ....|.|+|
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g--~~DPyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~--~~~~L~~~V 102 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKS--TPAPYVKVYLLENGACIAKKKTRIARK-TLDPLYQQSLVFDESP--QGKVLQVIV 102 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---C--CCEEEEEEEEEETTEEEEEEECCCCCS-CSSCEEEEEEECSSCC--TTEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCcCCC--CCCceEEEEEECCCccccceeCccCCC-CCCCCCCcEEEEEecC--CCCEEEEEE
Confidence 35889999999999999885 44 4999999999753 3889999998 8999999999999865 468899999
Q ss_pred E-eccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCCC
Q 021710 92 F-HSKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPS 135 (308)
Q Consensus 92 ~-d~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~s 135 (308)
| |++ ...++++||++.|+|.++.... ....||+|...+
T Consensus 103 ~~d~d-~~~~d~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~~ 141 (171)
T 2q3x_A 103 WGDYG-RMDHKCFMGVAQILLEELDLSS-----MVIGWYKLFPPS 141 (171)
T ss_dssp EEECS-TTCSSEEEEEEEECGGGSCTTS-----CEEEEEECBCGG
T ss_pred EEcCC-CCCCCCEEEEEEEEHHHcccCC-----CcceeEECCCcc
Confidence 9 888 4668899999999999997543 346899997643
No 24
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.73 E-value=1.3e-17 Score=137.34 Aligned_cols=108 Identities=25% Similarity=0.393 Sum_probs=89.3
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcC----CceEEEEeecCCCCCCccccEEEEe-eeCC-CCCceEEEE
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDP----AYRLATQSDDSGSTRPVWNERFTLP-ITHS-VRESVLTLE 90 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~----~~k~kT~v~k~gt~nP~WnE~f~f~-l~~~-~~~~~L~l~ 90 (308)
..+.|+|+|++|++|+..+..+. +||||++++.+ ..+++|+++++ +.||+|||+|.|. +... +....|.|+
T Consensus 27 ~~~~L~V~v~~a~~L~~~d~~g~--~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~~~~~~~~~~~l~i~ 103 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPMDSNGL--ADPYVKLHLLPGASKSNKLRTKTLRN-TRNPVWNETLQYHGITEEDMQRKTLRIS 103 (142)
T ss_dssp GGTEEEEEEEEEESCCCCCTTSC--CCEEEEEEEESCCSGGGEEECCCCCS-CSSCEEEEEEEEESCCHHHHHHCEEEEE
T ss_pred CCCEEEEEEEEecCCCCCCCCCC--CCCEEEEEEEcCCCCcceeeCCcCCC-CCCCcCcCEEEEcccCHHHccCCEEEEE
Confidence 45899999999999999887664 99999999975 37899999998 9999999999998 5432 123689999
Q ss_pred EEeccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeC
Q 021710 91 IFHSKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLR 133 (308)
Q Consensus 91 V~d~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~ 133 (308)
|||++ ...++++||++.|+|.+|..+. ....|+.|.+
T Consensus 104 V~d~d-~~~~d~~iG~~~i~l~~l~~~~-----~~~~~~~L~~ 140 (142)
T 2chd_A 104 VCDED-KFGHNEFIGETRFSLKKLKANQ-----RKNFNICLER 140 (142)
T ss_dssp EEEEC-TTSCEEEEEEEEEEGGGCCTTC-----CEEEEEECBC
T ss_pred EEECC-CCCCCcEEEEEEEEHHHcCCCC-----ccEEEEeccc
Confidence 99998 3567899999999999997643 3457787754
No 25
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.73 E-value=3.7e-17 Score=133.99 Aligned_cols=110 Identities=19% Similarity=0.320 Sum_probs=89.8
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcC--CceEEEEeecCCCCCCccccEEEEe-eeCC-CCCceEEEEEE
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDP--AYRLATQSDDSGSTRPVWNERFTLP-ITHS-VRESVLTLEIF 92 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~--~~k~kT~v~k~gt~nP~WnE~f~f~-l~~~-~~~~~L~l~V~ 92 (308)
..+.|+|+|++|++|+..+..++ .+||||++++.+ ..+++|+++++ +.||+|||+|.|. +... +....|.|+||
T Consensus 20 ~~~~L~v~v~~a~~L~~~d~~~~-~~dpyv~v~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~v~~~~~~~~~l~i~V~ 97 (138)
T 1ugk_A 20 ERKAFVVNIKEARGLPAMDEQSM-TSDPYIKMTILPEKKHKVKTRVLRK-TLDPAFDETFTFYGIPYTQIQELALHFTIL 97 (138)
T ss_dssp GGTEEEEEEEEEESCCCCBTTTT-BCEEEEEEEEETTTCSEEECCCCSS-CSSCEEEEEEEEECCCSTTGGGCEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCC-CCCCEEEEEEecCCCceEecCcCcC-CCCCcEeeEEEEcCcCHHHhccCEEEEEEE
Confidence 35889999999999999887522 499999999964 47999999998 9999999999996 6542 34568999999
Q ss_pred eccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeC
Q 021710 93 HSKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLR 133 (308)
Q Consensus 93 d~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~ 133 (308)
|++ ...++++||++.|+|.+|..... ....|+.|..
T Consensus 98 d~d-~~~~~~~lG~~~i~l~~l~~~~~----~~~~~~~l~~ 133 (138)
T 1ugk_A 98 SFD-RFSRDDIIGEVLIPLSGIELSEG----KMLMNREIIS 133 (138)
T ss_dssp EEC-SSCCCCCCEEEEEECTTCCCTTC----CEEEEEECBS
T ss_pred ECC-CCCCCcEEEEEEEehhHccCCCC----cchhhhhhhc
Confidence 998 36688999999999999976532 2356788864
No 26
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.73 E-value=2.7e-18 Score=141.21 Aligned_cols=109 Identities=20% Similarity=0.313 Sum_probs=90.0
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcCC-------------ceEEEEeecCCCCCCccccEEEEe-eeCC-C
Q 021710 18 THDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDPA-------------YRLATQSDDSGSTRPVWNERFTLP-ITHS-V 82 (308)
Q Consensus 18 ~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~~-------------~k~kT~v~k~gt~nP~WnE~f~f~-l~~~-~ 82 (308)
.+.|+|+|++|++|...+..+. +||||++++.+. .+.+|+++++ +.||+|||+|.|. +... +
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~--~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~v~~~~l 93 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGY--SDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQK-SLNPEWNQTVIYKSISMEQL 93 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSC--SCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHH-HHSCEEEEEEEECSCCHHHH
T ss_pred CCEEEEEEEEecCCCCCCCCCC--CCceEEEEEecCCCcccccccccccceeeccccCC-CCCCCCCCEEEECCcCHHHc
Confidence 4789999999999999887764 999999999863 3578999998 9999999999997 5431 2
Q ss_pred CCceEEEEEEeccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCCC
Q 021710 83 RESVLTLEIFHSKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPS 135 (308)
Q Consensus 83 ~~~~L~l~V~d~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~s 135 (308)
....|.|+|||++ ...++++||++.|+|.++..... ...||+|...+
T Consensus 94 ~~~~l~i~V~d~d-~~~~~~~lG~~~i~l~~l~~~~~-----~~~W~~L~~~~ 140 (142)
T 1rh8_A 94 MKKTLEVTVWDYD-RFSSNDFLGEVLIDLSSTSHLDN-----TPRWYPLKEQT 140 (142)
T ss_dssp TTCEEEEEEEEEC-SSSCEEEEEEEEEETTSCGGGTT-----CCEEEECBCCC
T ss_pred cCCEEEEEEEECC-CCCCCceEEEEEEeccccccCCC-----CCeEEECCccC
Confidence 4578999999998 35688999999999999876432 35899997543
No 27
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.73 E-value=9.6e-18 Score=139.26 Aligned_cols=109 Identities=16% Similarity=0.260 Sum_probs=90.1
Q ss_pred ccEEEEEEEEeecCCCCC-CCCCCCCCcEEEEEEcC----CceEEEEeecCCCCCCccccEEEEeeeCC-CCCceEEEEE
Q 021710 18 THDLEITIICAKHLKNVN-WRNGGDLKPYVVFYVDP----AYRLATQSDDSGSTRPVWNERFTLPITHS-VRESVLTLEI 91 (308)
Q Consensus 18 ~~~L~VtIisAk~L~~~~-~~~~~~~dPYv~v~l~~----~~k~kT~v~k~gt~nP~WnE~f~f~l~~~-~~~~~L~l~V 91 (308)
.+.|+|+|++|++|...+ ..+ .+||||++++.+ ..+.+|+++++ +.||+|||+|.|.+... +....|.|+|
T Consensus 22 ~~~L~V~v~~a~~L~~~d~~~~--~~dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~~~~~~L~~~V 98 (148)
T 3fdw_A 22 TQSLVVHVKECHQLAYADEAKK--RSNPYVKTYLLPDKSRQGKRKTSIKRD-TVNPLYDETLRYEIPESLLAQRTLQFSV 98 (148)
T ss_dssp TTEEEEEEEEEESCCCSBTTTT--BCCEEEEEEEETCCSGGGEEECCCCSS-CSSCEEEEEEEEECCSTTGGGCEEEEEE
T ss_pred CCEEEEEEEEecCCCCcccCCC--CCCeEEEEEEEcCCcccCccccccCCC-CCCCcEeeEEEEEeChhHhCceEEEEEE
Confidence 589999999999999877 344 599999999974 24899999998 99999999999998763 2356799999
Q ss_pred EeccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCCC
Q 021710 92 FHSKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPS 135 (308)
Q Consensus 92 ~d~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~s 135 (308)
||++. ..++++||++.|+|.++..... ...||+|....
T Consensus 99 ~d~d~-~~~~~~iG~~~i~l~~l~~~~~-----~~~W~~L~~~~ 136 (148)
T 3fdw_A 99 WHHGR-FGRNTFLGEAEIQMDSWKLDKK-----LDHCLPLHGKI 136 (148)
T ss_dssp EEECG-GGCEEEEEEEEEEHHHHHHHCC-----SEEEEECBCC-
T ss_pred EECCC-CcCCcEEEEEEEEcccccccCC-----ccceEECcCcc
Confidence 99983 5688999999999999976432 35899997543
No 28
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.73 E-value=4.1e-17 Score=134.18 Aligned_cols=105 Identities=17% Similarity=0.174 Sum_probs=85.7
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcC---CceEEEEeecCCCCCCccccEEEEeeeCC-CCCceEEEEEEe
Q 021710 18 THDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDP---AYRLATQSDDSGSTRPVWNERFTLPITHS-VRESVLTLEIFH 93 (308)
Q Consensus 18 ~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~---~~k~kT~v~k~gt~nP~WnE~f~f~l~~~-~~~~~L~l~V~d 93 (308)
.+.|+|+|++|++ .+..+ .+||||++++.+ ..+++|+++++ +.||+|||+|.|.+... +....|.|+|||
T Consensus 25 ~~~L~V~v~~a~~---~d~~g--~sDPyv~v~l~~~~~~~~~kT~v~~~-tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d 98 (138)
T 1wfm_A 25 KAELFVTRLEAVT---SNHDG--GCDCYVQGSVANRTGSVEAQTALKKR-QLHTTWEEGLVLPLAEEELPTATLTLTLRT 98 (138)
T ss_dssp TTEEEEEEEEEEC---CCCSS--CCCEEEEEEEEETTEEEEEECCCCCC-CSSEECSSCEEEECCTTSSTTCEEEEEEEE
T ss_pred CCEEEEEEEEEEc---CCCCC--CcceEEEEEEEcCCCcccEecccCcC-CCCCcCCceEEEEecHHHcCCCEEEEEEEE
Confidence 5899999999994 44444 499999999943 34789999998 99999999999998753 345789999999
Q ss_pred ccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCC
Q 021710 94 SKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRP 134 (308)
Q Consensus 94 ~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~ 134 (308)
++ ...++++||++.|+|.++.... ....|+.|...
T Consensus 99 ~d-~~~~dd~lG~~~i~l~~l~~~~-----~~~~W~~L~~~ 133 (138)
T 1wfm_A 99 CD-RFSRHSVAGELRLGLDGTSVPL-----GAAQWGELKTS 133 (138)
T ss_dssp CC-SSCTTSCSEEEEEESSSSSSCT-----TCCEEEECCCC
T ss_pred CC-CCCCCcEEEEEEEEcccccCcc-----cccceeeCcCC
Confidence 98 4678999999999999986433 23589999754
No 29
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=2.1e-17 Score=136.98 Aligned_cols=107 Identities=20% Similarity=0.272 Sum_probs=86.0
Q ss_pred ccEEEEEEEEeecCCCC-C------CCCCCCCCcEEEEEEcC--CceEEEEeecCCCCCCccccEEEEeeeCC-CCCceE
Q 021710 18 THDLEITIICAKHLKNV-N------WRNGGDLKPYVVFYVDP--AYRLATQSDDSGSTRPVWNERFTLPITHS-VRESVL 87 (308)
Q Consensus 18 ~~~L~VtIisAk~L~~~-~------~~~~~~~dPYv~v~l~~--~~k~kT~v~k~gt~nP~WnE~f~f~l~~~-~~~~~L 87 (308)
.+.|+|+|++|++|+.. + ..+ .+||||++++.+ ..+++|+++++ +.||+|||+|.|.+... +....|
T Consensus 25 ~~~L~V~v~~a~~L~~~~d~~g~~~~~~--~~dpyv~v~l~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L 101 (147)
T 2enp_A 25 HNHLTVRVIEARDLPPPISHDGSRQDMA--HSNPYVKICLLPDQKNSKQTGVKRK-TQKPVFEERYTFEIPFLEAQRRTL 101 (147)
T ss_dssp TTEEEEEEEEEECCCCSCSSCCSSCTTC--CCCCEEEEEEETCCSSCEECCCCCS-CSSCCCCBCCEECCCHHHHHHSEE
T ss_pred CCEEEEEEEEEeCCCCccccccccccCC--CCCcEEEEEEEeCCCcceEeecccC-CCCCeEeeeEEEEeChHHhccCEE
Confidence 57999999999999874 2 223 499999999974 36889999998 99999999999998642 234589
Q ss_pred EEEEEeccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeC
Q 021710 88 TLEIFHSKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLR 133 (308)
Q Consensus 88 ~l~V~d~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~ 133 (308)
.|+|||++ ...++++||++.|+|.+|..... ...|+.|..
T Consensus 102 ~~~V~d~d-~~~~~~~iG~~~i~l~~l~~~~~-----~~~w~~L~~ 141 (147)
T 2enp_A 102 LLTVVDFD-KFSRHCVIGKVSVPLCEVDLVKG-----GHWWKALIP 141 (147)
T ss_dssp EEEEECCS-TTCCSCCCEEEEEETTTSCTTTC-----CCEEECCBC
T ss_pred EEEEEECC-CCcCCcEEEEEEEechhcCCCCC-----ccEEEEeec
Confidence 99999998 45688999999999999965432 247887763
No 30
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.72 E-value=1.2e-16 Score=145.82 Aligned_cols=125 Identities=19% Similarity=0.306 Sum_probs=103.8
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcC--CceEEEEeecCCCCCCccccEEEEeeeCC-CCCceEEEEEEe
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDP--AYRLATQSDDSGSTRPVWNERFTLPITHS-VRESVLTLEIFH 93 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~--~~k~kT~v~k~gt~nP~WnE~f~f~l~~~-~~~~~L~l~V~d 93 (308)
..+.|+|+|++|++|...+..+. +||||++++.+ ..+.+|+++++ +.||+|||+|.|.+... +....|.|+|||
T Consensus 17 ~~~~L~v~v~~a~~L~~~d~~~~--~dpyv~v~~~~~~~~~~~T~~~~~-~~nP~wne~f~f~v~~~~~~~~~l~~~V~d 93 (284)
T 2r83_A 17 QNNQLLVGIIQAAELPALDMGGT--SDPYVKVFLLPDKKKKFETKVHRK-TLNPVFNEQFTFKVPYSELAGKTLVMAVYD 93 (284)
T ss_dssp TTTEEEEEEEEEECCCCCSSSSS--CCEEEEEEEETCTTSCEECCCCCS-CSSCEEEEEEEECCCGGGCTTCEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCC--CCeEEEEEEEcCCCceEeCCcccC-CCCCeeCceEEEEechHHhCcCEEEEEEEE
Confidence 35899999999999999887664 99999999964 35889999998 89999999999998753 345789999999
Q ss_pred ccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCCCC---CCccEEEEEEEEcc
Q 021710 94 SKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPSG---RPQGKIRVKLVLNG 150 (308)
Q Consensus 94 ~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~sg---~~~G~L~v~v~~~~ 150 (308)
++ ....+++||++.|+|.+|.... ....|+.|....+ ...|+|.+++.+..
T Consensus 94 ~d-~~~~~~~lG~~~i~l~~l~~~~-----~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p 147 (284)
T 2r83_A 94 FD-RFSKHDIIGEFKVPMNTVDFGH-----VTEEWRDLQSAEKEEQEKLGDICFSLRYVP 147 (284)
T ss_dssp CC-SSSCCCEEEEEEEEGGGCCCSS-----CEEEEEECBCCSSCCCCCCCEEEEEEEEET
T ss_pred CC-CCCCCceeEEEEEcchhcccCC-----cceeEEEeeccccccccccccEEEEEEecC
Confidence 98 3568999999999999997643 3468999986532 35799999988864
No 31
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.72 E-value=4.7e-17 Score=136.67 Aligned_cols=110 Identities=15% Similarity=0.222 Sum_probs=88.9
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcCC----ceEEEEeecCCCCCCccccEEEEeeeCC-CCCceEEEEE
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDPA----YRLATQSDDSGSTRPVWNERFTLPITHS-VRESVLTLEI 91 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~~----~k~kT~v~k~gt~nP~WnE~f~f~l~~~-~~~~~L~l~V 91 (308)
..+.|+|+|++|++|...+..+. +||||++++.+. .+.+|+++++ +.||+|||+|.|.+... +....|.|+|
T Consensus 23 ~~~~L~V~v~~a~~L~~~d~~g~--~dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~l~i~V 99 (159)
T 1tjx_A 23 TAGKLTVVILEAKNLKKMDVGGL--SDPYVKIHLMQNGKRLKKKKTTIKKN-TLNPYYNESFSFEVPFEQIQKVQVVVTV 99 (159)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSC--CCEEEEEEEEETTEEEEEEECCCCCS-CSSCEEEEEEEEECCGGGGGGCEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCccCCCC--CCeEEEEEEEeCCceeceeeCceecC-CCCCcccceEEEEcCHHHhCCcEEEEEE
Confidence 35799999999999999887664 999999999642 4789999998 99999999999998653 2356899999
Q ss_pred EeccCCCCCCceeeeEEEeCccc----------ccCCCCCCCceeEEEEEeC
Q 021710 92 FHSKLSETPKPLVGSVKFPLAHL----------VDSDSSEPTQYVRKLEVLR 133 (308)
Q Consensus 92 ~d~~~~~~~d~lLG~~~ipL~~L----------~~~~~~~~~~~~~~~~L~~ 133 (308)
||++ ....+++||++.|+|..+ +..... ....|+.|..
T Consensus 100 ~d~d-~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~---~~~~W~~L~~ 147 (159)
T 1tjx_A 100 LDYD-KIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRR---PIAQWHTLQV 147 (159)
T ss_dssp EECC-SSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTC---CEEEEEECBC
T ss_pred EECC-CCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCC---eeeeEEECcC
Confidence 9998 356899999999999853 332222 4568999964
No 32
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=2e-17 Score=136.14 Aligned_cols=113 Identities=20% Similarity=0.313 Sum_probs=89.4
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcC----CceEEEEeecCCCCCCccccEEEEeeeCC-CCCceEEEEEE
Q 021710 18 THDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDP----AYRLATQSDDSGSTRPVWNERFTLPITHS-VRESVLTLEIF 92 (308)
Q Consensus 18 ~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~----~~k~kT~v~k~gt~nP~WnE~f~f~l~~~-~~~~~L~l~V~ 92 (308)
.+.|+|+|++|++|...+..+ +||||++++.+ ..+++|+++++ +.||+|||+|.|.+... +....|.|+||
T Consensus 23 ~~~L~v~v~~a~~L~~~d~~g---~dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~i~V~ 98 (142)
T 2dmg_A 23 RNKLIVVVHACRNLIAFSEDG---SDPYVRMYLLPDKRRSGRRKTHVSKK-TLNPVFDQSFDFSVSLPEVQRRTLDVAVK 98 (142)
T ss_dssp TTEEEEEEEEEECCCCSSTTC---CCEEEEEEEESCCCSSSCEECCCCCS-CSSCEEEEEEEECCCHHHHHHCEEEEEEE
T ss_pred CCEEEEEEEEeECCCCCCCCC---CCeeEEEEEEcCCCCCCcccCCccCC-CCCCCcCceEEEEecHHHhCcCEEEEEEE
Confidence 578999999999999887642 89999999953 26889999998 99999999999998642 23458999999
Q ss_pred eccCCCC-CCceeeeEEEeCcccccCCCCCCCceeEEEEEeCCCCCCc
Q 021710 93 HSKLSET-PKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPSGRPQ 139 (308)
Q Consensus 93 d~~~~~~-~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~sg~~~ 139 (308)
|++.... .+++||++.|+|.++.... ....|+.|....++..
T Consensus 99 d~d~~~~~~~~~iG~~~i~l~~~~~~~-----~~~~W~~L~~~~~~~~ 141 (142)
T 2dmg_A 99 NSGGFLSKDKGLLGKVLVALASEELAK-----GWTQWYDLTEDSGPSS 141 (142)
T ss_dssp ECCCSSCCSCCCCEEEEEECCCSTTTT-----CBCCBCCCBCSCSCCC
T ss_pred ECCCccccCCcEEEEEEEecccccccc-----cccceeeccCCCCCCC
Confidence 9984222 3579999999999987643 2358999986554433
No 33
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.71 E-value=4.9e-17 Score=132.62 Aligned_cols=95 Identities=18% Similarity=0.355 Sum_probs=80.8
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcCC----ceEEEEeecCCCCCCccccEEEEeeeCC-CCCceEEEEE
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDPA----YRLATQSDDSGSTRPVWNERFTLPITHS-VRESVLTLEI 91 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~~----~k~kT~v~k~gt~nP~WnE~f~f~l~~~-~~~~~L~l~V 91 (308)
..+.|+|+|++|++|+..+..+. +||||++++.+. .+.+|+++++ +.||+|||+|.|.+... +....|.|+|
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~g~--~dpyv~v~~~~~~~~~~~~kT~~~~~-t~nP~wne~f~f~v~~~~l~~~~l~~~V 90 (138)
T 3n5a_A 14 SANSIIVNIIKARNLKAMDIGGT--SDPYVKVWLMYKDKRVEKKKTVTKKR-NLNPIFNESFAFDIPTEKLRETTIIITV 90 (138)
T ss_dssp TTTEEEEEEEEEESCCCCBTTTB--CCEEEEEEEEETTEEEEEEECCCCSS-CSSCEEEEEEEEECCGGGGGGEEEEEEE
T ss_pred CCCeEEEEEEEeeCCCCcCCCCC--cCeEEEEEEEeCCCccceEeCccccC-CCCCcCcceEEEECChhhcCceEEEEEE
Confidence 35899999999999999887654 999999999752 5789999998 89999999999998753 2346899999
Q ss_pred EeccCCCCCCceeeeEEEeCcccc
Q 021710 92 FHSKLSETPKPLVGSVKFPLAHLV 115 (308)
Q Consensus 92 ~d~~~~~~~d~lLG~~~ipL~~L~ 115 (308)
||++ ...+|++||++.|+|+++.
T Consensus 91 ~d~~-~~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 91 MDKD-KLSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp EECC-SSSCCEEEEEEEESSSSCH
T ss_pred EECC-CCCCCcEEEEEEEccccCC
Confidence 9998 3568999999999998643
No 34
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.71 E-value=8.3e-17 Score=136.19 Aligned_cols=94 Identities=20% Similarity=0.360 Sum_probs=81.5
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcC----CceEEEEeecCCCCCCccccEEEEeeeCC-CCCceEEEEE
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDP----AYRLATQSDDSGSTRPVWNERFTLPITHS-VRESVLTLEI 91 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~----~~k~kT~v~k~gt~nP~WnE~f~f~l~~~-~~~~~L~l~V 91 (308)
..+.|+|+|++|++|...+..+. +||||++++.+ ..+.+|+++++ +.||+|||+|.|.+... +....|.|+|
T Consensus 35 ~~~~L~V~v~~a~~L~~~d~~g~--~DPyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~i~V 111 (166)
T 2cm5_A 35 QQGGLIVGIIRCVHLAAMDANGY--SDPFVKLWLKPDMGKKAKHKTQIKKK-TLNPEFNEEFFYDIKHSDLAKKSLDISV 111 (166)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSC--CCEEEEEEEETC---CCEEECCCCCS-CSSCEEEEEEEEECCGGGGGGCEEEEEE
T ss_pred CCCEEEEEEEEeECCCCccCCCC--CCcEEEEEEECCCCccceEeCCcccC-CCCCcccceEEEEcchHhcCCCEEEEEE
Confidence 35789999999999999887664 99999999975 36899999998 99999999999998752 2356899999
Q ss_pred EeccCCCCCCceeeeEEEeCccc
Q 021710 92 FHSKLSETPKPLVGSVKFPLAHL 114 (308)
Q Consensus 92 ~d~~~~~~~d~lLG~~~ipL~~L 114 (308)
||++ ...++++||++.|+|.++
T Consensus 112 ~d~d-~~~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 112 WDYD-IGKSNDYIGGCQLGISAK 133 (166)
T ss_dssp EECC-SSSCCEEEEEEEEETTCC
T ss_pred EECC-CCCCCcEEEeEEEecccC
Confidence 9998 456889999999999985
No 35
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.71 E-value=7.5e-17 Score=134.47 Aligned_cols=93 Identities=18% Similarity=0.308 Sum_probs=74.9
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcC--C--ceEEEEeecCCCCCCccccEEEEeeeCC-CCCceEEEEE
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDP--A--YRLATQSDDSGSTRPVWNERFTLPITHS-VRESVLTLEI 91 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~--~--~k~kT~v~k~gt~nP~WnE~f~f~l~~~-~~~~~L~l~V 91 (308)
..+.|+|+|++|++|...+..+. +||||++++.+ . .+++|+++++ +.||+|||+|.|.+... +....|.|+|
T Consensus 28 ~~~~L~v~v~~a~~L~~~d~~g~--~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~l~v~V 104 (153)
T 1w15_A 28 TTNTLTVVVLKARHLPKSDVSGL--SDPYVKVNLYHAKKRISKKKTHVKKC-TPNAVFNELFVFDIPCESLEEISVEFLV 104 (153)
T ss_dssp TTTEEEEEEEEEESCC------C--CCEEEEEEEEETTEEEEEEECCCCCS-CSSEEEEEEEEEECCSSSSTTEEEEEEE
T ss_pred CCCEEEEEEEEeECCCCcCCCCC--CCeEEEEEEEeCCeEeceEecCcccC-CCCCeecceEEEECCHHHhCceEEEEEE
Confidence 35799999999999999887764 99999999943 2 2779999998 99999999999998763 3357899999
Q ss_pred EeccCCCCCCceeeeEEEeCcc
Q 021710 92 FHSKLSETPKPLVGSVKFPLAH 113 (308)
Q Consensus 92 ~d~~~~~~~d~lLG~~~ipL~~ 113 (308)
||++ ...++++||++.|+|.+
T Consensus 105 ~d~d-~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 105 LDSE-RGSRNEVIGRLVLGATA 125 (153)
T ss_dssp EECC-TTSCCEEEEEEEESTTC
T ss_pred EeCC-CCCCCcEEEEEEECCCC
Confidence 9998 46689999999999988
No 36
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.69 E-value=2.4e-16 Score=134.34 Aligned_cols=122 Identities=16% Similarity=0.230 Sum_probs=90.7
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcCCceEEEEeecCCCCCCccccEEEEeeeCCCCCceEEEEEEeccCC
Q 021710 18 THDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDPAYRLATQSDDSGSTRPVWNERFTLPITHSVRESVLTLEIFHSKLS 97 (308)
Q Consensus 18 ~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~~~k~kT~v~k~gt~nP~WnE~f~f~l~~~~~~~~L~l~V~d~~~~ 97 (308)
...|.|+|++|++|.. .+ .+||||+++ . ...+|+++++++.||+|||+|.|.+.. ....|.|+|||++
T Consensus 13 ~~~L~V~V~~A~~l~~---~g--~~DPYV~v~-~--~~~kt~~~~~~t~nP~WnE~f~f~v~~--~~~~L~~~V~D~d-- 80 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDGA---QE--KFNTYVTLK-V--QNVESTTIAVRGSQPSWEQDFMFEINR--LDLGLTVEVWNKG-- 80 (167)
T ss_dssp CCEEEEEEEEEECSSC---GG--GCEEEEEEE-E--TTEEEECCCEESSSCEEEEEEEEECCC--TTSEEEEEEEECC--
T ss_pred eEEEEEEEEEEECCCC---CC--CCCeEEEEE-e--cceEEEEecCCCCCCCCCCEEEEEeeC--CCCEEEEEEEECC--
Confidence 4799999999998842 33 499999999 2 346677776448999999999999986 3567999999998
Q ss_pred CCCCceeeeEEEeCcccccCCCCC-CCceeEEEEEeCCCCCCcc-------EEEEEEEEccC
Q 021710 98 ETPKPLVGSVKFPLAHLVDSDSSE-PTQYVRKLEVLRPSGRPQG-------KIRVKLVLNGR 151 (308)
Q Consensus 98 ~~~d~lLG~~~ipL~~L~~~~~~~-~~~~~~~~~L~~~sg~~~G-------~L~v~v~~~~~ 151 (308)
...|++||++.|+|++|....... ......|+.+..++++.+| .|.+.++|...
T Consensus 81 ~~~dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e~~ 142 (167)
T 2cjs_A 81 LIWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFELP 142 (167)
T ss_dssp SSCCEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEECC
T ss_pred CCCCceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEeecC
Confidence 458999999999999987644221 0123456776656666544 47777777543
No 37
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.66 E-value=5.2e-16 Score=128.02 Aligned_cols=120 Identities=13% Similarity=0.220 Sum_probs=101.5
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcCCceEEEEeecCCCCCCccccEEEEeeeCC-CCCceEEEEEEeccC
Q 021710 18 THDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDPAYRLATQSDDSGSTRPVWNERFTLPITHS-VRESVLTLEIFHSKL 96 (308)
Q Consensus 18 ~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~~~k~kT~v~k~gt~nP~WnE~f~f~l~~~-~~~~~L~l~V~d~~~ 96 (308)
..-|+|+|.+|.+|+. ..||++++.+.. .+++||++++++.||+|||.|.|++... ..+..|.|.|+|++
T Consensus 20 ~msL~V~l~~a~~Lpg-------~~Dp~akv~FRg-~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~- 90 (144)
T 3l9b_A 20 HMALIVHLKTVSELRG-------RADRIAKVTFRG-QSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYS- 90 (144)
T ss_dssp CEEEEEEEEEEESCCS-------CEEEEEEEEETT-EEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEEC-
T ss_pred cEEEEEEEEEecCCCC-------CCCCeEEEEEec-cceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECc-
Confidence 3679999999999983 399999999975 8999999984489999999999998765 35778999999998
Q ss_pred CCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCCCCCC-ccEEEEEEEEccC
Q 021710 97 SETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPSGRP-QGKIRVKLVLNGR 151 (308)
Q Consensus 97 ~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~sg~~-~G~L~v~v~~~~~ 151 (308)
+.+++++||++.|+|++|.... ....+..|.+.+.++ .++|.+.|+|.+.
T Consensus 91 ~v~~nrlIG~~~i~Lq~lv~~~-----~l~l~~~LvD~n~~~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 91 KVFSNKLIGTFRMVLQKVVEEN-----RVEVSDTLIDDNNAIIKTSLSMEVRYQAA 141 (144)
T ss_dssp TTSCCEEEEEEEEESHHHHHHS-----EEEEEEEEECTTSCEEEEEEEEEEEEEET
T ss_pred cccCCCEEEEEEEEhHHhccCC-----eEEEeecccCCCCCccccEEEEEEEecCC
Confidence 5789999999999999998765 234678888888776 5789999888753
No 38
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.66 E-value=7.9e-16 Score=141.94 Aligned_cols=126 Identities=17% Similarity=0.285 Sum_probs=99.1
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEc--CCceEEEEeecCCCCCCccccEEEEeeeCC-CCCceEEEEEEe
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVD--PAYRLATQSDDSGSTRPVWNERFTLPITHS-VRESVLTLEIFH 93 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~--~~~k~kT~v~k~gt~nP~WnE~f~f~l~~~-~~~~~L~l~V~d 93 (308)
..+.|+|+|++|++|...+..+. +||||++++. ...+++|+++++ +.||+|||+|.|.+... +....|.|+|||
T Consensus 18 ~~~~L~v~v~~a~~L~~~d~~g~--~dPyv~v~l~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~~~V~d 94 (296)
T 1dqv_A 18 GSDQLVVRILQALDLPAKDSNGF--SDPYVKIYLLPDRKKKFQTKVHRK-TLNPIFNETFQFSVPLAELAQRKLHFSVYD 94 (296)
T ss_dssp SSCEEEEEEEEEECCCCCSTTSC--CCEEEEEECTTSTTSCEECCCCCS-CSSCEEEEEEEEECCGGGGSSCCCEEEEEE
T ss_pred CCCEEEEEEEEeECCCCcCCCCC--cCeEEEEEEEcCCCeeEeCCccCC-CCCCcEeeEEEEEecHHHhcCCEEEEEEEE
Confidence 35899999999999999887764 9999999994 347899999998 89999999999998642 234689999999
Q ss_pred ccCCCCCCceeeeEEEe-CcccccCCCCCCCceeEEEEEeCCCC--CCccEEEEEEEEcc
Q 021710 94 SKLSETPKPLVGSVKFP-LAHLVDSDSSEPTQYVRKLEVLRPSG--RPQGKIRVKLVLNG 150 (308)
Q Consensus 94 ~~~~~~~d~lLG~~~ip-L~~L~~~~~~~~~~~~~~~~L~~~sg--~~~G~L~v~v~~~~ 150 (308)
++ ...++++||++.|+ |.++..... ....|+.|....+ ...|+|.+++.+..
T Consensus 95 ~d-~~~~~~~iG~~~i~~l~~~~~~~~----~~~~w~~L~~~~~~~~~~G~i~vsl~y~~ 149 (296)
T 1dqv_A 95 FD-RFSRHDLIGQVVLDNLLELAEQPP----DRPLWRDILEGGSEKADLGELNFSLCYLP 149 (296)
T ss_dssp CC-SSSCCCEEEEEECCCTTGGGSSCS----SCCCCEECBCCSSCCSCCCEEEEEEEEET
T ss_pred cC-CCCCCceEEEEEeccccccccCCc----cceeeeccccccccccccceEEEEEEecc
Confidence 98 46789999999995 555543221 2347999875432 34799999888764
No 39
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.64 E-value=7.3e-16 Score=151.79 Aligned_cols=123 Identities=22% Similarity=0.356 Sum_probs=101.3
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcCCceEEEEeecCCCCCCccccEEEEeeeCCCCCceEEEEEEeccC
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDPAYRLATQSDDSGSTRPVWNERFTLPITHSVRESVLTLEIFHSKL 96 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~~~k~kT~v~k~gt~nP~WnE~f~f~l~~~~~~~~L~l~V~d~~~ 96 (308)
..+.|+|+|++|++|+..+..+. +||||+++++. .+.+|+++++ +.||+|||+|.|.+... ....|.|+|||++
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~--sdpyv~v~~~~-~~~~T~~~~~-t~nP~w~e~f~f~~~~~-~~~~l~~~v~d~d- 458 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGK--SNPYCEISMGS-QSYTTRTIQD-TLNPKWNFNCQFFIKDL-YQDVLCLTLFDRD- 458 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSC--CCEEEEEEETT-EEEECCCCSS-CSSCEEEEEEEEEESCT-TTCEEEEEEEECC-
T ss_pred CCceEEEEeceeecCCCCCCCCC--CCeEEEEEECC-eeccCCccCC-CCCCccCceEEEEecCC-CCCEEEEEEEeCC-
Confidence 35789999999999999887765 99999999976 7899999998 89999999999998754 4578999999998
Q ss_pred CCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCCCCCCccEEEEEEEEc
Q 021710 97 SETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPSGRPQGKIRVKLVLN 149 (308)
Q Consensus 97 ~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~sg~~~G~L~v~v~~~ 149 (308)
...+|++||++.++|.+|..+..... ....|+.|. +...|+|.|++.+.
T Consensus 459 ~~~~~d~lG~~~~~l~~l~~~~~~~~-~~~~~~~l~---~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 459 QFSPDDFLGRTEIPVAKIRTEQESKG-PMTRRLLLH---EVPTGEVWVRFDLQ 507 (510)
T ss_dssp SSSSCCEEEEEEEEHHHHHHHHHHHC-SCCEEEECB---SSSSCEEEEEEEEE
T ss_pred CCCCCCceEEEEEEHHHhccccCCCC-ceeeeecCC---CCCCceEEEEEEEE
Confidence 46689999999999999976432100 235789885 45689999998875
No 40
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.64 E-value=1.9e-15 Score=150.42 Aligned_cols=114 Identities=13% Similarity=0.217 Sum_probs=95.6
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcCCceEEEEeecCCCCCCccccEEEEeeeCCCCCceEEEEEEeccCC
Q 021710 18 THDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDPAYRLATQSDDSGSTRPVWNERFTLPITHSVRESVLTLEIFHSKLS 97 (308)
Q Consensus 18 ~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~~~k~kT~v~k~gt~nP~WnE~f~f~l~~~~~~~~L~l~V~d~~~~ 97 (308)
.+.|+|+|++|++|+. ++++. +||||+|++.. .+.+|+++++ ++||+|||+|.|.+........|+|+|||+|.
T Consensus 393 ~~~L~V~V~~A~~L~~-D~~g~--sDPYV~v~l~~-~~~kTkvik~-tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~- 466 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWG-DYTTA--TDAYLKVFFGG-QEFRTGVVWN-NNNPRWTDKMDFENVLLSTGGPLRVQVWDADY- 466 (540)
T ss_dssp EEEEEEEEEEEESCCC-SSCSC--CCEEEEEEETT-EEEECCCBCS-CSSCBCCCCEEEEEEETTTCCCEEEEEEECCS-
T ss_pred ccEEEEEEEEccCCCc-ccCCC--cCeEEEEEECC-EeeeeeeecC-CCCCCCCeEEEEEEecCCCCCEEEEEEEECCC-
Confidence 4789999999999998 87775 99999999986 6799999999 89999999999986532246789999999994
Q ss_pred CCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCCCCCCccEEEEEEEEccCC
Q 021710 98 ETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPSGRPQGKIRVKLVLNGRP 152 (308)
Q Consensus 98 ~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~sg~~~G~L~v~v~~~~~~ 152 (308)
...|+|||++.++|.. + ....|+.|. .|.|++++.++..+
T Consensus 467 ~~~dD~LG~~~~~L~~---g------~~~~~~~l~------~G~l~~~~~~~c~p 506 (540)
T 3nsj_A 467 GWDDDLLGSCDRSPHS---G------FHEVTCELN------HGRVKFSYHAKCLP 506 (540)
T ss_dssp SSCCEEEEEEEECCCS---E------EEEEEEECS------SSEEEEEEEEEECT
T ss_pred CCCCCEEEEEEEEeeC---C------cEEEEEEcC------CeEEEEEEEEEECC
Confidence 5688999999999872 1 335788762 69999999998864
No 41
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.63 E-value=2.7e-15 Score=151.97 Aligned_cols=122 Identities=18% Similarity=0.316 Sum_probs=102.2
Q ss_pred cccEEEEEEEEeecCCCCCC--CCCCCCCcEEEEEEcC----CceEEEEeecCCCCCCccccEEEEeeeCCCCCceEEEE
Q 021710 17 ITHDLEITIICAKHLKNVNW--RNGGDLKPYVVFYVDP----AYRLATQSDDSGSTRPVWNERFTLPITHSVRESVLTLE 90 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~--~~~~~~dPYv~v~l~~----~~k~kT~v~k~gt~nP~WnE~f~f~l~~~~~~~~L~l~ 90 (308)
....|+|+|++|++|+..+. .+ ..||||+|.+.+ ..+.||+++++++.||+|||+|.|.+... +...|.|+
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~--~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~-el~~L~~~ 571 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNS--IVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVP-DLALVRFM 571 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSS--CCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCG-GGCEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccC--CCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecC-CCCEEEEE
Confidence 46899999999999998774 33 599999999954 26889999998459999999999998753 34689999
Q ss_pred EEeccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCCCCCC--ccEEEEEEEEcc
Q 021710 91 IFHSKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPSGRP--QGKIRVKLVLNG 150 (308)
Q Consensus 91 V~d~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~sg~~--~G~L~v~v~~~~ 150 (308)
|||++ ...++++||++.|+|.+|..+ .+|++|++..|++ .++|.|+|.+.+
T Consensus 572 V~D~D-~~~~dd~iG~~~ipl~~L~~G--------~r~v~L~d~~g~~~~~~~L~v~i~~~~ 624 (624)
T 1djx_A 572 VEDYD-SSSKNDFIGQSTIPWNSLKQG--------YRHVHLLSKNGDQHPSATLFVKISIQD 624 (624)
T ss_dssp EEECC-SSSCCEEEEEEEEEGGGBCCE--------EEEEEEECTTSCEEEEEEEEEEEEEEC
T ss_pred EEEcC-CCCCCceeEEEEEEHHHcCCC--------cEEEeCCCCCcCCCCceEEEEEEEEEC
Confidence 99998 456899999999999998652 4799999888875 689999998863
No 42
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.55 E-value=3e-14 Score=129.95 Aligned_cols=109 Identities=15% Similarity=0.210 Sum_probs=87.6
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcCC----ceEEEEeecCCCCCCccccEEEEeeeCC-CCCceEEEEEE
Q 021710 18 THDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDPA----YRLATQSDDSGSTRPVWNERFTLPITHS-VRESVLTLEIF 92 (308)
Q Consensus 18 ~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~~----~k~kT~v~k~gt~nP~WnE~f~f~l~~~-~~~~~L~l~V~ 92 (308)
.+.|+|+|++|++|...+..+. +||||++++... .+.+|+++++ +.||+|||+|.|.+... +....|.|+||
T Consensus 149 ~~~l~v~v~~a~~L~~~d~~~~--~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~l~i~V~ 225 (284)
T 2r83_A 149 AGKLTVVILEAKNLKKMDVGGL--SDPYVKIHLMQNGKRLKKKKTTIKKN-TLNPYYNESFSFEVPFEQIQKVQVVVTVL 225 (284)
T ss_dssp TTEEEEEEEEEESCCCCSTTSC--CCEEEEEEEEETTEEEEEEECCCCCS-CSSCEEEEEEEEECCTTTGGGEEEEEEEE
T ss_pred CCceEEEEEEeECCCCcCCCCC--cCeEEEEEEEeCCcEeeeeccceecC-CCCCEEceeEEEeCCHHHhCceEEEEEEE
Confidence 4789999999999999887764 999999998531 4789999998 99999999999998753 23567999999
Q ss_pred eccCCCCCCceeeeEEEeCcccc----------cCCCCCCCceeEEEEEeC
Q 021710 93 HSKLSETPKPLVGSVKFPLAHLV----------DSDSSEPTQYVRKLEVLR 133 (308)
Q Consensus 93 d~~~~~~~d~lLG~~~ipL~~L~----------~~~~~~~~~~~~~~~L~~ 133 (308)
|++ ..+++++||++.|+|..+. ..... ....|+.|..
T Consensus 226 d~d-~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~---~~~~W~~L~~ 272 (284)
T 2r83_A 226 DYD-KIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRR---PIAQWHTLQV 272 (284)
T ss_dssp ECC-SSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTS---CEEEEEECBC
T ss_pred eCC-CCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCC---chheeeecCC
Confidence 998 4678999999999997632 11111 3468999964
No 43
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.50 E-value=1.4e-15 Score=149.87 Aligned_cols=121 Identities=21% Similarity=0.279 Sum_probs=20.7
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcCCceEEEEeecCCC---CCCccccEEEEeeeCCCCCceEEEEEEec
Q 021710 18 THDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDPAYRLATQSDDSGS---TRPVWNERFTLPITHSVRESVLTLEIFHS 94 (308)
Q Consensus 18 ~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~~~k~kT~v~k~gt---~nP~WnE~f~f~l~~~~~~~~L~l~V~d~ 94 (308)
.+.|+|+|++|++|+..+ ||||+++++...+.||+++++ + .||+|||+|.|.+... ...|.|+|||+
T Consensus 10 ~~~L~V~VieAk~L~~~d-------dpYv~v~l~~~~~~kT~v~~k-t~~glnP~WnE~F~f~~~~~--~~~L~v~V~d~ 79 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK-------RYYCELCLDDMLYARTTSKPR-SASGDTVFWGEHFEFNNLPA--VRALRLHLYRD 79 (483)
T ss_dssp EECC-----------------------------------------------------CCEECC-----------------
T ss_pred ccEEEEEEEEcCCcCCCC-------CCeEEEEECCeEEeeeeEEeC-CCCCCCCccccEEEEecCCC--ccEEEEEEEec
Confidence 467999999999997642 899999998766789999998 7 9999999999997543 47899999994
Q ss_pred -cC--CCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCCCC------------------------CCccEEEEEEE
Q 021710 95 -KL--SETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPSG------------------------RPQGKIRVKLV 147 (308)
Q Consensus 95 -~~--~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~sg------------------------~~~G~L~v~v~ 147 (308)
+. ...+|++||++.|+|.+|..+. ....||+|..+.. +..|+|+|+++
T Consensus 80 ~d~~~~~~~d~~lG~v~i~l~~l~~~~-----~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~ 154 (483)
T 3bxj_A 80 SDKKRKKDKAGYVGLVTVPVATLAGRH-----FTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKAR 154 (483)
T ss_dssp --------------------------------CCEECC--------------------------------------CEEE
T ss_pred CCccccCCCCceEEEEEEEHHHhcCCC-----CCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEE
Confidence 31 2457899999999999997643 2368999965432 23699999999
Q ss_pred EccCCC
Q 021710 148 LNGRPL 153 (308)
Q Consensus 148 ~~~~~~ 153 (308)
|.+...
T Consensus 155 ~~~~~v 160 (483)
T 3bxj_A 155 YQTMSI 160 (483)
T ss_dssp EEECCB
T ss_pred eeeeee
Confidence 987643
No 44
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.50 E-value=5.8e-14 Score=144.13 Aligned_cols=107 Identities=17% Similarity=0.373 Sum_probs=90.4
Q ss_pred CCcccEEEEEEEEeecCCC---CCCCCCCCCCcEEEEEEcC--CceEEEEeecCCCCCCccccEEEEeeeCCCCCceEEE
Q 021710 15 SPITHDLEITIICAKHLKN---VNWRNGGDLKPYVVFYVDP--AYRLATQSDDSGSTRPVWNERFTLPITHSVRESVLTL 89 (308)
Q Consensus 15 ~~~~~~L~VtIisAk~L~~---~~~~~~~~~dPYv~v~l~~--~~k~kT~v~k~gt~nP~WnE~f~f~l~~~~~~~~L~l 89 (308)
..+.+.|+|+|++|++|+. .+..+. +||||+|++.+ ..++||+++++ +.||+|||+|.|.+... ....|+|
T Consensus 14 ~~~~g~L~V~Vi~A~nL~~~~~~D~~g~--sDPYV~V~l~~~~~~k~kTkvik~-tlNPvWNEtF~F~v~~~-~~~~L~~ 89 (749)
T 1cjy_A 14 HQYSHKFTVVVLRATKVTKGAFGDMLDT--PDPYVELFISTTPDSRKRTRHFNN-DINPVWNETFEFILDPN-QENVLEI 89 (749)
T ss_dssp CCCCEEEEEEEEEEECCCSCHHHHHHCC--CCEEEEEECTTSTTCCEECCCCTT-CSSCEEEEEEEEEECTT-SCCBCEE
T ss_pred CCCccEEEEEEEEEECCCCccccCCCCC--cCeEEEEEEecCCCCeEecceEcC-CCCCeeeeEEEEEecCC-CCCEEEE
Confidence 3456899999999999998 666654 99999999985 36899999998 89999999999999864 4568999
Q ss_pred EEEeccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEe
Q 021710 90 EIFHSKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVL 132 (308)
Q Consensus 90 ~V~d~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~ 132 (308)
+|||++. .. |++||++.|+|.+|..+. ....|++|.
T Consensus 90 ~V~D~D~-~~-ddfIG~v~I~L~~L~~g~-----~~~~w~~L~ 125 (749)
T 1cjy_A 90 TLMDANY-VM-DETLGTATFTVSSMKVGE-----KKEVPFIFN 125 (749)
T ss_dssp EEEECCS-SS-CEEEEEECCBSTTSCTTC-----CCCEEEEET
T ss_pred EEEECCC-CC-CceeEEEEEEHHHcCCCC-----ceEEEEecC
Confidence 9999984 55 999999999999996543 235899994
No 45
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.44 E-value=1e-12 Score=136.15 Aligned_cols=115 Identities=18% Similarity=0.338 Sum_probs=95.4
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcCC------ceEEEEeecCCCCCCccccE-EEEe-eeCCCCCceEE
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDPA------YRLATQSDDSGSTRPVWNER-FTLP-ITHSVRESVLT 88 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~~------~k~kT~v~k~gt~nP~WnE~-f~f~-l~~~~~~~~L~ 88 (308)
....|+|+|++|++|... ..||||+|.+.+. .+++|+++++++.||+|||+ |.|. +..+ +...|.
T Consensus 648 ~~~~L~V~Visaq~L~~~------~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~p-ela~Lr 720 (816)
T 3qr0_A 648 VAGTIEIKIISAQFLSDK------QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLP-DLAVVR 720 (816)
T ss_dssp CCEEEEEEEEEEECCCSS------CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCG-GGCEEE
T ss_pred cceEEEEEEEEcccCCCC------CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCC-CccEEE
Confidence 347899999999999742 3899999999641 47899999986799999998 9998 6543 346899
Q ss_pred EEEEeccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCCCCCC--ccEEEEEEEEccC
Q 021710 89 LEIFHSKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPSGRP--QGKIRVKLVLNGR 151 (308)
Q Consensus 89 l~V~d~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~sg~~--~G~L~v~v~~~~~ 151 (308)
|+|||++ ++|||++.|+|+.|..+ .++++|++..|+. .++|.|.|.+.+-
T Consensus 721 f~V~D~d-----ddfiG~~~ipL~~L~~G--------yR~vpL~~~~g~~~~~atLfv~i~~~~~ 772 (816)
T 3qr0_A 721 IIVSEEN-----GKFIGHRVMPLDGIKPG--------YRHVPLRNESNRPLGLASVFAHIVAKDY 772 (816)
T ss_dssp EEEEETT-----SCEEEEEEEESTTCCCE--------EEEEEEECTTSCEEEEEEEEEEEEEEEC
T ss_pred EEEEecC-----CCeeeEEEEEHHHcCCc--------ceEEEEeCCCCCCCCceEEEEEEEEEec
Confidence 9999975 67999999999998753 4789999988886 4799999999863
No 46
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.43 E-value=7.5e-13 Score=137.94 Aligned_cols=115 Identities=17% Similarity=0.321 Sum_probs=94.8
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcC-----CceEEEEeecCCCCCCcccc-EEEEe-eeCCCCCceEEE
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDP-----AYRLATQSDDSGSTRPVWNE-RFTLP-ITHSVRESVLTL 89 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~-----~~k~kT~v~k~gt~nP~WnE-~f~f~-l~~~~~~~~L~l 89 (308)
....|+|+|++|++|... ..||||+|.+.+ ..+++|+++++++.||+||| +|.|. |... +...|.|
T Consensus 723 ~~~~L~V~Visaq~L~~~------~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~p-ela~Lrf 795 (885)
T 3ohm_B 723 VANALRVKVISGQFLSDR------KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLP-TLASLRI 795 (885)
T ss_dssp CCEEEEEEEEEEESCCSS------CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCG-GGCEEEE
T ss_pred cceEEEEEEEEeccCccc------CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcC-CcCEEEE
Confidence 346899999999999752 389999999964 13579999987679999999 69998 6432 3457999
Q ss_pred EEEeccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCCCCCC--ccEEEEEEEEccC
Q 021710 90 EIFHSKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPSGRP--QGKIRVKLVLNGR 151 (308)
Q Consensus 90 ~V~d~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~sg~~--~G~L~v~v~~~~~ 151 (308)
+|||++ ++|||++.|+|+.|..+ .++++|++..|.. .++|.|.|.+.+-
T Consensus 796 ~V~D~d-----ddfiG~~~lpL~~L~~G--------yR~vpL~~~~g~~l~~atLfv~i~~~~~ 846 (885)
T 3ohm_B 796 AAFEEG-----GKFVGHRILPVSAIRSG--------YHYVCLRNEANQPLCLPALLIYTEASDY 846 (885)
T ss_dssp EEEETT-----TEEEEEEEEETTTCCCE--------EEEEEEECTTSCEEEEEEEEEEEEEEEC
T ss_pred EEEcCC-----ccEEeeEEEEHHHcCCC--------ceEEEecCCCCCccCceEEEEEEEEEec
Confidence 999976 68999999999998753 4789999988875 7899999999863
No 47
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.40 E-value=1e-13 Score=127.70 Aligned_cols=94 Identities=18% Similarity=0.228 Sum_probs=80.6
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcC----CceEEEEeecCCCCCCccccEEEEeeeCC-CCCceEEEEEE
Q 021710 18 THDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDP----AYRLATQSDDSGSTRPVWNERFTLPITHS-VRESVLTLEIF 92 (308)
Q Consensus 18 ~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~----~~k~kT~v~k~gt~nP~WnE~f~f~l~~~-~~~~~L~l~V~ 92 (308)
.+.|+|+|++|++|...+..+. +||||++++.. ..+++|+++++ +.||+|||+|.|.+... +....|.|+||
T Consensus 151 ~~~l~v~v~~a~~L~~~d~~g~--~Dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~i~V~ 227 (296)
T 1dqv_A 151 AGLLTVTIIKASNLKAMDLTGF--SDPYVKASLISEGRRLKKRKTSIKKN-TLNPTYNEALVFDVAPESVENVGLSIAVV 227 (296)
T ss_dssp TTEEEEEEEEEESCCCCSSSSC--CCEEEEECCCTTCCTTSCEECCCCCS-CSSCEEEECCCCCCCSGGGGSCCCCCEEE
T ss_pred cceeEEEEEEeecCCccCCCCC--CCcEEEEEEEeCCcCccceecceecC-CCCCeECceEEEEcCHHHccCcEEEEEEE
Confidence 4789999999999999887764 89999999962 25789999998 99999999999998753 33568999999
Q ss_pred eccCCCCCCceeeeEEEeCcccc
Q 021710 93 HSKLSETPKPLVGSVKFPLAHLV 115 (308)
Q Consensus 93 d~~~~~~~d~lLG~~~ipL~~L~ 115 (308)
|++ ..+++++||++.|+|.++.
T Consensus 228 d~d-~~~~~~~iG~~~i~l~~~~ 249 (296)
T 1dqv_A 228 DYD-CIGHNEVIGVCRVGPEAAD 249 (296)
T ss_dssp ECC-SSSCCEEEEECCCSSCTTC
T ss_pred eCC-CCCCCceEEEEEECCccCC
Confidence 998 4678999999999998764
No 48
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.40 E-value=2.2e-12 Score=133.78 Aligned_cols=113 Identities=22% Similarity=0.361 Sum_probs=92.2
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcC-----CceEEEE-eecCCCCCCcccc-EEEE-eeeCCCCCceEE
Q 021710 17 ITHDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDP-----AYRLATQ-SDDSGSTRPVWNE-RFTL-PITHSVRESVLT 88 (308)
Q Consensus 17 ~~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~-----~~k~kT~-v~k~gt~nP~WnE-~f~f-~l~~~~~~~~L~ 88 (308)
..+.|+|+|++|++|... ..||||+|.+.+ ..++||+ ++++++.||+||| +|.| .|..+ +...|.
T Consensus 676 ~~~~L~V~Visa~~L~~~------~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~-el~~Lr 748 (799)
T 2zkm_X 676 VATTLSITVISGQFLSER------SVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMP-ELASLR 748 (799)
T ss_dssp TCEEEEEEEEEEESCCSS------CCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSG-GGCEEE
T ss_pred eeeeEEEEEEeccccCcc------CCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccC-CccEEE
Confidence 357899999999999852 389999999953 1468999 8887679999999 6999 77543 345899
Q ss_pred EEEEeccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCCCCCC--ccEEEEEEEEc
Q 021710 89 LEIFHSKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPSGRP--QGKIRVKLVLN 149 (308)
Q Consensus 89 l~V~d~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~sg~~--~G~L~v~v~~~ 149 (308)
|+|||++ +++||++.|+|+.|..+ .+|++|++..|.+ .++|.|+|.++
T Consensus 749 ~~V~D~d-----~d~iG~~~ipl~~L~~G--------~r~v~L~~~~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 749 VAVMEEG-----NKFLGHRIIPINALNSG--------YHHLCLHSESNMPLTMPALFIFLEMK 798 (799)
T ss_dssp EEEEETT-----TEEEEEEEEEGGGBCCE--------EEEEEEECTTCCEEEEEEEEEEEEEE
T ss_pred EEEEEeC-----CCccceEeeehhhcCCC--------cEEEeccCCCCCCCCceEEEEEEEEE
Confidence 9999985 68999999999998652 4789999887774 58888988875
No 49
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.36 E-value=2.1e-12 Score=131.82 Aligned_cols=107 Identities=23% Similarity=0.351 Sum_probs=91.5
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcC----CceEEEEeecCCCCCCccccEEEEeeeCCCCCceEEEEEEe
Q 021710 18 THDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDP----AYRLATQSDDSGSTRPVWNERFTLPITHSVRESVLTLEIFH 93 (308)
Q Consensus 18 ~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~----~~k~kT~v~k~gt~nP~WnE~f~f~l~~~~~~~~L~l~V~d 93 (308)
...|+|+|++|++|...+..+. +||||++++.+ ..+.+|+++++ ++||+|||+|.|.+........|.|+|||
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~--sDPyvkv~l~p~~~~~~k~kT~v~~~-tlnP~wne~f~f~~~~~~~~~~L~v~v~d 247 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGL--SDPYVKLKLIPDPKSESKQKTKTIKS-SLNPEWNETFRFQLKESDKDRRLSVEIWD 247 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSS--CCEEEEEEEESCSSCCSCEECCCCSS-CSSCEEEEEEEEECCSTTTTCEEEEEEEE
T ss_pred cceeeeeeecccccCCCCcccc--cCcccccccccCcccccccccccccc-ccCCCccceeeeecccCCccceeeeEEee
Confidence 3678999999999999988765 99999999943 36889999999 89999999999998865456679999999
Q ss_pred ccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCC
Q 021710 94 SKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRP 134 (308)
Q Consensus 94 ~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~ 134 (308)
++ ...+|++||++.|+|.++.... ...|+.|...
T Consensus 248 ~d-~~~~dd~iG~~~i~l~~l~~~~------~~~w~~Lls~ 281 (674)
T 3pfq_A 248 WD-LTSRNDFMGSLSFGISELQKAG------VDGWFKLLSQ 281 (674)
T ss_dssp CC-SSSCCEECCBCCCBTTHHHHCC------EEEEEECBCT
T ss_pred cc-cccccccccccccchhhhccCC------cccceeeccc
Confidence 98 4679999999999999998642 3689999754
No 50
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=99.22 E-value=1.3e-10 Score=94.41 Aligned_cols=115 Identities=16% Similarity=0.225 Sum_probs=88.1
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcCCc---eEEE-EeecCCCCCCccccEEEEeeeCCCCCceEEEEEEe
Q 021710 18 THDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDPAY---RLAT-QSDDSGSTRPVWNERFTLPITHSVRESVLTLEIFH 93 (308)
Q Consensus 18 ~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~~~---k~kT-~v~k~gt~nP~WnE~f~f~l~~~~~~~~L~l~V~d 93 (308)
...|+|.+.+..-......... ..||||.|.++... +.+| .+.++ |..|+|||+|.-.|.+ ...|.|.|||
T Consensus 9 ~~flRi~l~~~~~~~~~~~~~~-~lDPY~aV~VdE~~~te~gqtl~~Kkk-T~~P~Wne~Fd~~V~~---Gr~l~i~Vfh 83 (138)
T 2enj_A 9 SPFLRIGLSNFDCGSCQSCQGE-AVNPYCAVLVKEYVESENGQMYIQKKP-TMYPPWDSTFDAHINK---GRVMQIIVKG 83 (138)
T ss_dssp CCCEEEEEEEEECCCCCCSCCC-CCCCEEEEEEEEEEEETTEEEEEEEEE-EECCCSSSEEEECCCS---SCEEEEEEEC
T ss_pred CcceEEEeeccccCCCCCcccc-cCCceEEEEeeeeeeccCceeecccCC-CCCccccceEeeeEEC---CeEEEEEEEc
Confidence 3568898877765443321122 49999999998632 3677 55555 8999999999999886 6889999998
Q ss_pred ccCCCCCCceeeeEEEeCcccccC---CCCCCCceeEEEEEeCCCCCCccEEEEEEEEcc
Q 021710 94 SKLSETPKPLVGSVKFPLAHLVDS---DSSEPTQYVRKLEVLRPSGRPQGKIRVKLVLNG 150 (308)
Q Consensus 94 ~~~~~~~d~lLG~~~ipL~~L~~~---~~~~~~~~~~~~~L~~~sg~~~G~L~v~v~~~~ 150 (308)
... +||..++|++.+|+.. .+. ....|+.| +++|+|++.+.+.-
T Consensus 84 ~a~-----~fVAn~tV~~edL~~~ck~~~g---~~e~WvdL-----eP~Gkl~v~i~~~~ 130 (138)
T 2enj_A 84 KNV-----DLISETTVELYSLAERCRKNNG---KTEIWLEL-----KPQGRMLMNARYFL 130 (138)
T ss_dssp SSC-----SCCEEEEEESHHHHHHHHHTTT---CEEEEEEC-----BSSCEEEEEEEECC
T ss_pred CCC-----CeeeEEEEEHHHHHhhhccCCC---ceEEEEec-----ccCcEEEEEEEEEE
Confidence 762 7999999999999854 222 45799999 67999999999964
No 51
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.18 E-value=5e-10 Score=89.91 Aligned_cols=115 Identities=16% Similarity=0.188 Sum_probs=84.7
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcCCc---eEEE-EeecCCCCCCccccEEEEeeeCCCCCceEEEEEEec
Q 021710 19 HDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDPAY---RLAT-QSDDSGSTRPVWNERFTLPITHSVRESVLTLEIFHS 94 (308)
Q Consensus 19 ~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~~~---k~kT-~v~k~gt~nP~WnE~f~f~l~~~~~~~~L~l~V~d~ 94 (308)
..|+|.+.++.--.... .+. ..||||.|.++... +.+| .+.++ |..|+|||+|.-.+.+ ...|.|.|||.
T Consensus 6 ~flRi~~~~~~~~~~~~-~~~-~lDPy~aV~vdE~~~~e~g~t~~~K~k-T~~P~Wne~Fd~~V~~---Gr~l~i~Vfh~ 79 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQA-EDE-ANQPFCAVKMKEALSTERGKTLVQKKP-TMYPEWKSTFDAHIYE---GRVIQIVLMRA 79 (126)
T ss_dssp CEEEEEEEEEECSSCCC-SSS-SCCCEEEEEEEEEEEETTEEEEECCSC-CBCCCTTCEEEEECCT---TCEEEEEEEEE
T ss_pred ccEEeeeccccccccCC-ccc-cCCceEEEEeeeeEEcccceeecccCC-CCCcCccceEEeeeeC---CEEEEEEEEcC
Confidence 56888887766422222 112 49999999998633 2366 44455 9999999999999986 68899999987
Q ss_pred cCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCCCCCCccEEEEEEEEc
Q 021710 95 KLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPSGRPQGKIRVKLVLN 149 (308)
Q Consensus 95 ~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~sg~~~G~L~v~v~~~ 149 (308)
.. +||..++|++++|.......+.....|+.| +++|+|++.+.+.
T Consensus 80 a~-----~fvAn~tV~~edL~~~c~~~~g~~e~WvdL-----eP~Gkl~~~i~~~ 124 (126)
T 1yrk_A 80 AE-----EPVSEVTVGVSVLAERCKKNNGKAEFWLDL-----QPQAKVLMSVQYF 124 (126)
T ss_dssp TT-----EEEEEEEEEHHHHHHHHHTTTTEEEEEEEC-----BSSCEEEEEEEEE
T ss_pred CC-----CeeeEEEEEHHHHHhhhccCCCceEEEEec-----ccCcEEEEEEEEe
Confidence 62 799999999999985411101155789999 6799999999874
No 52
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=96.44 E-value=0.011 Score=49.07 Aligned_cols=128 Identities=11% Similarity=0.115 Sum_probs=87.8
Q ss_pred CcccEEEEEEEEeecCCCCCC-CCCCCCCcEEEEEEcCCceEEEEeecCCCCCCccccEEEEeeeCC------CCCceEE
Q 021710 16 PITHDLEITIICAKHLKNVNW-RNGGDLKPYVVFYVDPAYRLATQSDDSGSTRPVWNERFTLPITHS------VRESVLT 88 (308)
Q Consensus 16 ~~~~~L~VtIisAk~L~~~~~-~~~~~~dPYv~v~l~~~~k~kT~v~k~gt~nP~WnE~f~f~l~~~------~~~~~L~ 88 (308)
..-+.++|.|.++.--+..-. .+...+..||++.+-.-+.+.|.+++ +.+|.+|.+-.|.+... +....|.
T Consensus 15 ~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~--G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~ 92 (156)
T 2yrb_A 15 RGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR--GLHPEYNFTSQYLVHVNDLFLQYIQKNTIT 92 (156)
T ss_dssp SSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE--SSSCCCCEEEEEEECCSHHHHHHHHHCCEE
T ss_pred CCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc--CCCCCcceEEEEEEEeCHHHHHHHhcCCEE
Confidence 345889999988763111100 11101334566555445788888887 48999999888887542 2445788
Q ss_pred EEEEeccCCCCCCceeeeEEEeCcccccCCCCCCCceeEEEEEeCCCC--CCccEEEEEEEEccC
Q 021710 89 LEIFHSKLSETPKPLVGSVKFPLAHLVDSDSSEPTQYVRKLEVLRPSG--RPQGKIRVKLVLNGR 151 (308)
Q Consensus 89 l~V~d~~~~~~~d~lLG~~~ipL~~L~~~~~~~~~~~~~~~~L~~~sg--~~~G~L~v~v~~~~~ 151 (308)
|++.... ....+.||.++|+|.+|+.... .......|...++ ..-|.|.+.|+++..
T Consensus 93 lELhqa~--g~~~~tla~~~I~l~~lLe~~~----~i~g~~~L~g~~g~~~~~G~LeywiRL~~P 151 (156)
T 2yrb_A 93 LEVHQAY--STEYETIAACQLKFHEILEKSG----RIFCTASLIGTKGDIPNFGTVEYWFRLRVS 151 (156)
T ss_dssp EEEEEEC--SSCEEEEEEEEECCSHHHHCCS----CEEEEEEECBSSSCCTTSEEEEEEEEEEEC
T ss_pred EEEEEee--CCCceEEEEEEEEhHHhhCcCC----ceEEEEEEEcCCCCcceEEEEEEEEEEecc
Confidence 8888764 3356799999999999997643 2345668887777 568999999999764
No 53
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=95.49 E-value=0.22 Score=43.49 Aligned_cols=57 Identities=16% Similarity=0.196 Sum_probs=40.2
Q ss_pred ceEEEEeecCCCCCCccccEEEEeeeCC-CCCceEEEEEEeccCCC---CCCceeeeEEEeC
Q 021710 54 YRLATQSDDSGSTRPVWNERFTLPITHS-VRESVLTLEIFHSKLSE---TPKPLVGSVKFPL 111 (308)
Q Consensus 54 ~k~kT~v~k~gt~nP~WnE~f~f~l~~~-~~~~~L~l~V~d~~~~~---~~d~lLG~~~ipL 111 (308)
...+|.|... +.+|.|+|++.+.|+.. .....|.|+++|..... ..+..+|.+.+||
T Consensus 77 se~~S~V~YH-nk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL 137 (220)
T 3l4c_A 77 SEYKSVIYYQ-VKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKL 137 (220)
T ss_dssp SCEECCCCTT-CSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEES
T ss_pred eeEEEEEEEc-CCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEc
Confidence 4678888887 78999999999999865 35678999999865221 1123455555554
No 54
>1dx0_A Prion protein; brain, repeat; NMR {Bos taurus} SCOP: d.6.1.1 PDB: 1dx1_A 1qlx_A 1qlz_A
Probab=93.90 E-value=0.0042 Score=53.59 Aligned_cols=30 Identities=17% Similarity=0.161 Sum_probs=11.0
Q ss_pred CCCCCcCcchhhHHHHHHhhhhhhHHHHhh
Q 021710 253 GPSAPVDYSPYDQKLQKQFGGLSLEEEVNR 282 (308)
Q Consensus 253 ~~~~g~g~gl~~ga~~g~lgg~~~~~~~~~ 282 (308)
+++++|.++.|+||++|+|+|.+|+++++.
T Consensus 96 kg~~g~a~aAa~Gag~G~LGGalLG~a~~~ 125 (219)
T 1dx0_A 96 TNMKHVAGAAAAGAVVGGLGGYMLGSAMSR 125 (219)
T ss_dssp -----------------CCCSCEECCCCCC
T ss_pred CCcchHHHHHHHHHHhhhhhhhhhhccccc
Confidence 445678888889999999999999887654
No 55
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=91.57 E-value=0.67 Score=48.77 Aligned_cols=72 Identities=15% Similarity=0.296 Sum_probs=49.1
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEE--cC---CceEEEEeecCCCCCCccccEEEEeeeC--CCCCceEEEE
Q 021710 18 THDLEITIICAKHLKNVNWRNGGDLKPYVVFYV--DP---AYRLATQSDDSGSTRPVWNERFTLPITH--SVRESVLTLE 90 (308)
Q Consensus 18 ~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l--~~---~~k~kT~v~k~gt~nP~WnE~f~f~l~~--~~~~~~L~l~ 90 (308)
...+.|+|+++.++...+ ..+-||.+.+ +. .....|+.+.. ..++.|||.++|++.- -.....|.|.
T Consensus 216 ~~~f~i~i~~~~~~~~~~-----~~~~~V~~~l~~g~~~l~~~~~T~~~~~-~~~~~Wne~l~f~i~i~dLPr~a~L~~t 289 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNADE-----RMKLVVQAGLFHGNEMLCKTVSSSEVNV-CSEPVWKQRLEFDISVCDLPRMARLCFA 289 (940)
T ss_dssp CSEEEEEEEEEECCCC--------CEEEEEEEEEETTEESSCCEECCCEES-CSSCEEEEEEEEEEEGGGCCTTCEEEEE
T ss_pred CCceEEEEEEecccCCCC-----CceEEEEEEEEECCEEccCceecccccC-CCCcccceEEEcccccccCCcccEEEEE
Confidence 467999999999886431 3677887766 22 12334444443 5789999999998753 2357899999
Q ss_pred EEecc
Q 021710 91 IFHSK 95 (308)
Q Consensus 91 V~d~~ 95 (308)
||+..
T Consensus 290 i~~~~ 294 (940)
T 2wxf_A 290 LYAVV 294 (940)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 99954
No 56
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=89.36 E-value=1.6 Score=46.47 Aligned_cols=92 Identities=25% Similarity=0.233 Sum_probs=58.5
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcC--C---ceEEEEeecCCCCCCccccEEEEeeeC--CCCCceEEEE
Q 021710 18 THDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDP--A---YRLATQSDDSGSTRPVWNERFTLPITH--SVRESVLTLE 90 (308)
Q Consensus 18 ~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~--~---~k~kT~v~k~gt~nP~WnE~f~f~l~~--~~~~~~L~l~ 90 (308)
...++|+|+++.++.. ++.. ..+-||.+.+-. . ...+|+.+. ..++.|||.++|++.- -.....|.|.
T Consensus 354 ~~~f~v~i~~~~~~n~-~~~~--~~~~~V~~~l~hG~~~L~~~~~T~~~~--~~~~~Wne~l~f~i~i~dLPr~arL~~t 428 (1091)
T 3hhm_A 354 NSALRIKILCATYVNV-NIRD--IDKIYVRTGIYHGGEPLCDNVNTQRVP--CSNPRWNEWLNYDIYIPDLPRAARLCLS 428 (1091)
T ss_dssp CSEEEEEEEEESCCCC-CCSS--CCCCCEEEEEESSSCSSCCEECCCCCC--TTSCEEEEEEEEEEEGGGCCTTCEEEEE
T ss_pred CCCEEEEEEEecCCCC-Cccc--cceEEEEEEEEECCEEccCceeccccC--CCCCCCCeeEEecCccccCChhcEEEEE
Confidence 3678999999988753 3322 367888888732 1 233344332 4578899999998752 2367899999
Q ss_pred EEeccCCC---CCCceeeeEEEeCccc
Q 021710 91 IFHSKLSE---TPKPLVGSVKFPLAHL 114 (308)
Q Consensus 91 V~d~~~~~---~~d~lLG~~~ipL~~L 114 (308)
||+..... ..+..||.+.++|-+.
T Consensus 429 l~~~~~~~~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 429 ICSVKGRKGAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp ECCCCCCC-------CCEEEEEESBCT
T ss_pred EEEecCccCcccccceeEEeeeeeEcc
Confidence 99865211 1234678877777654
No 57
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=84.60 E-value=2.8 Score=44.20 Aligned_cols=72 Identities=15% Similarity=0.228 Sum_probs=45.0
Q ss_pred cEEEEEEEEeecCC-CCCCCCCCCCCcEEEEEE--cCCc--eEEEEeecCCCCCCccccEEEEeeeC--CCCCceEEEEE
Q 021710 19 HDLEITIICAKHLK-NVNWRNGGDLKPYVVFYV--DPAY--RLATQSDDSGSTRPVWNERFTLPITH--SVRESVLTLEI 91 (308)
Q Consensus 19 ~~L~VtIisAk~L~-~~~~~~~~~~dPYv~v~l--~~~~--k~kT~v~k~gt~nP~WnE~f~f~l~~--~~~~~~L~l~V 91 (308)
..++|+|+++..+. ..+ . ..+-||.+.+ +... ..+|+-+.. +.++.|||.++|++.- -.....|.|.|
T Consensus 218 ~~f~i~i~~~~~~~~~~~--~--~~~~~V~~~l~~G~~~l~~~~t~~~~~-~~~~~Wne~l~f~i~i~dLPr~a~L~~ti 292 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLPRT--A--DLTVFVEANIQYGQQVLCQRRTSPKPF-TEEVLWNVWLEFSIKIKDLPKGALLNLQI 292 (961)
T ss_dssp SEEEEEEEEEECSSCCTT--S--CEEEEEEEEEEETTEEEEEEECCCEEC-CSEEEEEEEEEEEEEGGGCCTTCEEEEEE
T ss_pred CceEEEEeecccccccCC--C--CceEEEEEEEEECCEEcccceeecccc-CCCcccceeEEeccccccCCcccEEEEEE
Confidence 56888999886522 111 1 2567877655 3211 123333333 5679999999988652 23678999999
Q ss_pred Eecc
Q 021710 92 FHSK 95 (308)
Q Consensus 92 ~d~~ 95 (308)
|+..
T Consensus 293 ~~~~ 296 (961)
T 1e7u_A 293 YCGA 296 (961)
T ss_dssp EEEE
T ss_pred Eecc
Confidence 9754
No 58
>1tpx_A Prion protein, major prion protein; antibody, unknown function; 2.56A {Ovis aries} SCOP: d.6.1.1
Probab=82.66 E-value=0.11 Score=40.87 Aligned_cols=20 Identities=15% Similarity=0.243 Sum_probs=10.2
Q ss_pred chhhHHHHHHhhhhhhHHHH
Q 021710 261 SPYDQKLQKQFGGLSLEEEV 280 (308)
Q Consensus 261 gl~~ga~~g~lgg~~~~~~~ 280 (308)
+.|+|||+|.|||-||+.++
T Consensus 5 aaaaGAvvGgl~Gy~lg~a~ 24 (121)
T 1tpx_A 5 AAAAGAVVGGLGGYMLGSAM 24 (121)
T ss_dssp ---------CCTTCEECCCC
T ss_pred hHHHhHHhhcchhHHHHhcc
Confidence 45779999999999999986
No 59
>3heq_A Major prion protein; cell membrane, disease mutation, disulfide bond, glycoprotein, golgi apparatus, GPI-anchor, lipoprotein, membrane, polymorphism; 1.80A {Homo sapiens} PDB: 2lsb_A 2k1d_A 2lej_A 2lv1_A 2lft_A 1fkc_A 1fo7_A 3haf_A 3hj5_A 1qm0_A 1qm1_A 2kun_A 3hes_A 3her_A 1b10_A 2joh_A 2fj3_A 2jom_A 2l1h_A 2l39_A ...
Probab=82.48 E-value=0.12 Score=40.88 Aligned_cols=24 Identities=13% Similarity=0.151 Sum_probs=8.3
Q ss_pred CcCcchhhHHHHHHhhhhhhHHHH
Q 021710 257 PVDYSPYDQKLQKQFGGLSLEEEV 280 (308)
Q Consensus 257 g~g~gl~~ga~~g~lgg~~~~~~~ 280 (308)
-+..+-|+|||+|.|+|-||++++
T Consensus 22 ~vAgaAaAGAVvGGlgGy~lG~am 45 (142)
T 3heq_A 22 HMAGAAAAGAVVGGLGGYMLGSAM 45 (142)
T ss_dssp ---------------CCCEECCCC
T ss_pred HHHHHHHhhhhhhccchHHHHhhc
Confidence 355677889999999999999986
No 60
>2qzq_A Axin interactor, dorsalization associated protein; beta sheet sandwich, coiled coil, signaling protein, lipid binding protein; 1.90A {Danio rerio} PDB: 2qz5_A
Probab=82.06 E-value=2.5 Score=34.59 Aligned_cols=93 Identities=14% Similarity=0.073 Sum_probs=56.3
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCCCcEEEEEEcC------CceEEEEee-cCCCCCCccccEEEEeee--CCCCCceEEE
Q 021710 19 HDLEITIICAKHLKNVNWRNGGDLKPYVVFYVDP------AYRLATQSD-DSGSTRPVWNERFTLPIT--HSVRESVLTL 89 (308)
Q Consensus 19 ~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l~~------~~k~kT~v~-k~gt~nP~WnE~f~f~l~--~~~~~~~L~l 89 (308)
..|.|.|.+- +|++... -.|||++|++-. ...+.|.+. ...+..=.|+..+.+... +-.+...+.|
T Consensus 14 t~l~v~Ie~i-glkda~~----~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqtple~lp~G~aivf 88 (152)
T 2qzq_A 14 TLLTLTIEKI-GLKDAGQ----CIDPYITVSVKDLNGIDLNPVQDTPVATRKEDTYIHFSVDVEIQRHLEKLPKGAAIFF 88 (152)
T ss_dssp CEEEEEEEEE-ECTTGGG----CEEEEEEEEEECTTSCBSSCCEECCCCCEECSSEEEEEEEEECSSCGGGSCTTCEEEE
T ss_pred eEEEEEEEEE-EeCCHHH----ccCCeEEEEEEcCCCCCccccccCCCcceecCCeEEEeeEEEeeCcHHHCCCCcEEEE
Confidence 4577776665 7876543 378999999843 245666665 221333344443333322 2125678999
Q ss_pred EEEeccCCCCCCceeeeEEEeCccccc
Q 021710 90 EIFHSKLSETPKPLVGSVKFPLAHLVD 116 (308)
Q Consensus 90 ~V~d~~~~~~~d~lLG~~~ipL~~L~~ 116 (308)
|+.|.+.....-...+.+.+.+++|..
T Consensus 89 ElkH~k~kkkk~S~kCw~f~~~d~i~~ 115 (152)
T 2qzq_A 89 EFKHYKPKKRFTSTKCFAFMEMDEIKP 115 (152)
T ss_dssp EEEEEETTTTEEEEEEEEEEEGGGCCS
T ss_pred EEEEecccceeeeeeeEEEEEhhhccc
Confidence 999987433233367778888888765
No 61
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=79.96 E-value=2.4 Score=45.24 Aligned_cols=72 Identities=15% Similarity=0.270 Sum_probs=47.5
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCCCcEEEEEE--cCC---ceEEEEeecCCCCCCccccEEEEeeeCC--CCCceEEEE
Q 021710 18 THDLEITIICAKHLKNVNWRNGGDLKPYVVFYV--DPA---YRLATQSDDSGSTRPVWNERFTLPITHS--VRESVLTLE 90 (308)
Q Consensus 18 ~~~L~VtIisAk~L~~~~~~~~~~~dPYv~v~l--~~~---~k~kT~v~k~gt~nP~WnE~f~f~l~~~--~~~~~L~l~ 90 (308)
...+.|+|+++.++...+ ..+-||.+.+ +.. ....|+.+.. ..++.|||.++|++.-. .....|.|.
T Consensus 352 ~~~f~i~i~~~~~~~~~~-----~~~~~V~~~l~~g~~~L~~~~~T~~~~~-~~~~~Wnewl~f~i~~~dLPr~a~L~~t 425 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTEE-----TVKVHVRAGLFHGTELLCKTVVSSEISG-KNDHIWNEQLEFDINICDLPRMARLCFA 425 (1092)
T ss_dssp CSEEEEEECCCCCCCCCS-----SCCCCCBCCEEETTEESSCCCBCCCCCS-SSCCCCCEEEEEEEESSSCCTTCEEEEE
T ss_pred CCCEEEEEEEeccCCCCC-----CceEEEEEEEEECCEEccCceecccccC-CCCCccceeEEeCCccccCChhcEEEEE
Confidence 367899999998886432 2566766444 331 1233444433 57899999999987532 367899999
Q ss_pred EEecc
Q 021710 91 IFHSK 95 (308)
Q Consensus 91 V~d~~ 95 (308)
||+..
T Consensus 426 i~~~~ 430 (1092)
T 2y3a_A 426 VYAVL 430 (1092)
T ss_dssp CCCC-
T ss_pred EEEec
Confidence 99863
No 62
>2lbg_A Major prion protein; conserved hydrophobic region, membrane protei; NMR {Homo sapiens}
Probab=75.00 E-value=2.1 Score=24.35 Aligned_cols=18 Identities=17% Similarity=0.244 Sum_probs=10.1
Q ss_pred hhHHHHHHhhhhhhHHHH
Q 021710 263 YDQKLQKQFGGLSLEEEV 280 (308)
Q Consensus 263 ~~ga~~g~lgg~~~~~~~ 280 (308)
|.|||-|.|||.+|+-+.
T Consensus 8 AAGaVvGglGgy~lg~~m 25 (27)
T 2lbg_A 8 AAGAVVGGLGGYMLGSAM 25 (27)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhHHHHHHHHh
Confidence 335666666666665443
No 63
>1xu0_A Prion protein, XLPRP; amphibian, polymorphism, glycoprotein, membrane protein; NMR {Xenopus laevis} SCOP: d.6.1.1
Probab=61.39 E-value=1.1 Score=35.63 Aligned_cols=19 Identities=21% Similarity=0.129 Sum_probs=8.5
Q ss_pred chhhHHHHHHhhhhhhHHH
Q 021710 261 SPYDQKLQKQFGGLSLEEE 279 (308)
Q Consensus 261 gl~~ga~~g~lgg~~~~~~ 279 (308)
-.++|||||+++|.+|..+
T Consensus 19 ~va~aA~Ag~~~GY~lG~~ 37 (130)
T 1xu0_A 19 SVAIGAAAGAIGGYMLGNA 37 (130)
T ss_dssp ----------CCEEEEEEE
T ss_pred HHHHHHHhhccchhhhccc
Confidence 3566999999999999988
No 64
>1u3m_A CHPRP, prion-like protein; prion protein, TSE, membrane protein; NMR {Gallus gallus} SCOP: d.6.1.1
Probab=50.08 E-value=1.2 Score=34.52 Aligned_cols=16 Identities=13% Similarity=0.329 Sum_probs=13.6
Q ss_pred HHHHHHhhhhhhHHHH
Q 021710 265 QKLQKQFGGLSLEEEV 280 (308)
Q Consensus 265 ga~~g~lgg~~~~~~~ 280 (308)
|||+|.|||.||+.+.
T Consensus 1 GAvvG~~gGY~lG~~m 16 (117)
T 1u3m_A 1 GSVVGGLGGYAMGRVM 16 (117)
T ss_dssp CCSSSCSSCCEECCCC
T ss_pred CcccccchhhhhcccC
Confidence 6889999999998773
No 65
>2pbd_V VAsp, vasodilator-stimulated phosphoprotein; ternary complex, profilin, actin, poly-proline, loading poly-Pro site, GAB domain, structural protein; HET: HIC ATP; 1.50A {Homo sapiens}
Probab=44.71 E-value=14 Score=23.50 Aligned_cols=9 Identities=0% Similarity=-0.230 Sum_probs=4.7
Q ss_pred cchhhHHHHH
Q 021710 260 YSPYDQKLQK 269 (308)
Q Consensus 260 ~gl~~ga~~g 269 (308)
+||| -|+||
T Consensus 22 ~GLA-aalAg 30 (43)
T 2pbd_V 22 PGLA-AAIAG 30 (43)
T ss_dssp CCHH-HHHHT
T ss_pred cHHH-HHHhh
Confidence 5666 44444
No 66
>1dx0_A Prion protein; brain, repeat; NMR {Bos taurus} SCOP: d.6.1.1 PDB: 1dx1_A 1qlx_A 1qlz_A
Probab=42.73 E-value=1.8 Score=37.28 Aligned_cols=26 Identities=8% Similarity=-0.032 Sum_probs=11.2
Q ss_pred CCCCCcCcchhhHHHHHHhhhhhhHH
Q 021710 253 GPSAPVDYSPYDQKLQKQFGGLSLEE 278 (308)
Q Consensus 253 ~~~~g~g~gl~~ga~~g~lgg~~~~~ 278 (308)
+-.|++++|+++|+|+|+|.|.+|.+
T Consensus 100 g~a~aAa~Gag~G~LGGalLG~a~~~ 125 (219)
T 1dx0_A 100 HVAGAAAAGAVVGGLGGYMLGSAMSR 125 (219)
T ss_dssp -------------CCCSCEECCCCCC
T ss_pred hHHHHHHHHHHhhhhhhhhhhccccc
Confidence 44567888888888888888988877
No 67
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=39.51 E-value=27 Score=21.51 Aligned_cols=24 Identities=8% Similarity=-0.096 Sum_probs=14.3
Q ss_pred CcCcchhhHHHHHHhhhhhhHHHH
Q 021710 257 PVDYSPYDQKLQKQFGGLSLEEEV 280 (308)
Q Consensus 257 g~g~gl~~ga~~g~lgg~~~~~~~ 280 (308)
|+..|--.|+|-|.+.|++|--++
T Consensus 7 ~ls~GaIAGiVvG~v~gv~li~~l 30 (38)
T 2k1k_A 7 GLTGGEIVAVIFGLLLGAALLLGI 30 (38)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCceeeeehHHHHHHHHHHHH
Confidence 555555556666677676654443
No 68
>1u5l_A Prion protein; pRNP, PRP, TSE, membrane protein; NMR {Trachemys scripta} SCOP: d.6.1.1
Probab=38.19 E-value=1.5 Score=33.57 Aligned_cols=17 Identities=18% Similarity=0.384 Sum_probs=10.6
Q ss_pred HHHHHHhhhhhhHHHHh
Q 021710 265 QKLQKQFGGLSLEEEVN 281 (308)
Q Consensus 265 ga~~g~lgg~~~~~~~~ 281 (308)
|||.|.|||.||+.++.
T Consensus 1 gavvgglggy~lg~ams 17 (108)
T 1u5l_A 1 GSVVGGLGGYALGSAMS 17 (108)
T ss_dssp CCSCSSCTTSEECCCCS
T ss_pred CCceechhHHHHhhhhc
Confidence 45666677777765553
Done!