Query 021712
Match_columns 308
No_of_seqs 134 out of 1270
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 05:05:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021712.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021712hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1292 Xanthine/uracil transp 100.0 5.1E-46 1.1E-50 358.1 18.9 282 1-303 114-400 (510)
2 COG2233 UraA Xanthine/uracil p 100.0 1.3E-44 2.7E-49 351.7 20.8 264 1-306 105-377 (451)
3 PRK11412 putative uracil/xanth 100.0 5.8E-41 1.3E-45 328.5 25.5 259 4-307 103-373 (433)
4 PF00860 Xan_ur_permease: Perm 100.0 4.1E-39 8.8E-44 312.9 18.6 266 1-307 89-365 (389)
5 PRK10720 uracil transporter; P 100.0 1.2E-37 2.6E-42 305.8 24.8 264 1-307 86-360 (428)
6 TIGR03616 RutG pyrimidine util 100.0 2.9E-37 6.2E-42 303.1 24.8 265 2-307 110-380 (429)
7 TIGR00801 ncs2 uracil-xanthine 100.0 2E-36 4.3E-41 296.3 24.3 266 2-307 91-367 (415)
8 TIGR03173 pbuX xanthine permea 100.0 2.7E-35 5.9E-40 287.5 25.0 261 1-307 82-351 (406)
9 COG2252 Xanthine/uracil/vitami 99.8 4.7E-20 1E-24 179.0 19.5 253 2-297 102-369 (436)
10 TIGR00843 benE benzoate transp 99.8 2.5E-17 5.4E-22 159.3 20.1 243 1-304 103-356 (395)
11 PF03594 BenE: Benzoate membra 99.8 1.6E-17 3.4E-22 158.5 18.0 243 1-304 87-340 (378)
12 COG3135 BenE Uncharacterized p 99.6 3.1E-14 6.8E-19 133.9 15.5 238 1-297 102-348 (402)
13 COG0659 SUL1 Sulfate permease 99.6 1.9E-13 4.2E-18 138.4 22.3 235 2-292 98-358 (554)
14 PRK11660 putative transporter; 99.5 1.1E-11 2.3E-16 126.4 22.5 258 4-296 105-393 (568)
15 TIGR00815 sulP high affinity s 99.4 1.9E-11 4.1E-16 124.5 23.4 239 4-294 99-371 (563)
16 PF00916 Sulfate_transp: Sulfa 99.1 1.3E-10 2.8E-15 107.7 8.8 227 19-295 2-260 (280)
17 KOG0236 Sulfate/bicarbonate/ox 98.5 9E-06 1.9E-10 84.6 18.6 227 3-271 167-425 (665)
18 PF11840 DUF3360: Protein of u 95.5 0.63 1.4E-05 45.3 15.1 219 10-266 150-381 (492)
19 TIGR00834 ae anion exchange pr 92.9 10 0.00022 41.2 18.9 114 170-294 655-787 (900)
20 KOG1172 Na+-independent Cl/HCO 80.9 89 0.0019 33.9 19.2 60 171-232 632-691 (876)
21 TIGR00843 benE benzoate transp 62.1 36 0.00078 33.6 8.0 88 5-104 301-393 (395)
22 TIGR03173 pbuX xanthine permea 34.0 4.5E+02 0.0098 25.6 10.9 34 8-41 298-331 (406)
23 PRK11412 putative uracil/xanth 33.1 2.5E+02 0.0054 28.1 8.8 36 7-42 319-354 (433)
24 TIGR00801 ncs2 uracil-xanthine 28.3 1.5E+02 0.0033 29.1 6.4 35 7-41 313-347 (415)
25 TIGR00815 sulP high affinity s 26.8 2.8E+02 0.0061 28.4 8.2 40 8-49 336-375 (563)
26 PF03594 BenE: Benzoate membra 25.8 3.2E+02 0.007 26.9 7.9 86 7-104 287-377 (378)
27 PRK11660 putative transporter; 25.0 3.8E+02 0.0083 27.5 8.8 26 24-49 370-395 (568)
28 COG0659 SUL1 Sulfate permease 23.6 4E+02 0.0087 27.5 8.5 27 23-49 338-364 (554)
No 1
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism]
Probab=100.00 E-value=5.1e-46 Score=358.11 Aligned_cols=282 Identities=42% Similarity=0.733 Sum_probs=253.8
Q ss_pred ChhHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHHHHhhhhhhhccCCCCcccchHHHHHHHHHHHHH--HHH
Q 021712 1 MRELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGSCVEISIPQILLVLIFALY--LRG 78 (308)
Q Consensus 1 ~~~~~GavlvaGll~illg~tg~~~~l~~~~Pp~V~g~~l~lIGl~l~~~~~~~~gs~~~i~~~~~~lv~~v~l~--~~~ 78 (308)
||+++|++++++.+|+++|++|+.+++.|++.|..+.+.++++|+.+.+.+.+..+.+++++++.+.+++++++| +..
T Consensus 114 mr~iqGAlivas~vqiilG~sGl~g~l~rfi~Plti~P~v~lvgl~l~~~~~~~~~~~weI~l~~~llli~fsqy~~~~~ 193 (510)
T KOG1292|consen 114 MREIQGALIVASLVQIILGFSGLWGNLLRFIGPLTIVPLVALVGLGLFQDGFPKLGKHWEISLPEILLLILFSQYASLPK 193 (510)
T ss_pred HHHhcchHHHHHHHHHHHhhhhhHHHHHhhcCChhhhhHHHHHhhhhHHhhhhhhhhheeecHHHHHHHHHHHHhhhccc
Confidence 689999999999999999999999999999999999999999999999999999999999999999999999988 211
Q ss_pred HH--HhhcchhhhhhHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhhccccccccccccccccCcccc
Q 021712 79 IS--VFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAWVR 156 (308)
Q Consensus 79 ~~--~~~k~~~~~~~iLigivvg~~~a~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~~~~f~ 156 (308)
.. ...+++++++|+++++.+.|.+|.+++.+|.+|+++ .+|+++|+.|-+..++++||+.
T Consensus 194 ~~~~~~~~~if~~f~vll~i~ivW~~~~iLT~tgay~~~~------------------~~t~~~~RTD~~~vi~~apWi~ 255 (510)
T KOG1292|consen 194 KGFGSRRIQIFSRFPVLLAIAIVWLYCFILTITGAYPYKP------------------TTTQSSCRTDRNGVISSAPWIR 255 (510)
T ss_pred ccccccccchHhhccHHHHHHHHHHHHHHHHhccccCCCc------------------cccCCcccccHhhhhccCCcee
Confidence 11 122567899999999999999999999988876532 3567889999887788999999
Q ss_pred cCcccccCCCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhHhCCCCCCcccccccchhhchHHHHHhhhCCCCCCCcccc
Q 021712 157 IPYPLQWGIPIFHLRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTLTE 236 (308)
Q Consensus 157 ~P~~~~fg~P~f~~~~il~~~~~~lv~~~es~g~~~av~~~~~~~~~~~~~i~r~l~adGl~tilagl~Gtg~~~t~~se 236 (308)
+|+|+|||.|+||.+....+....+++++|++|++.+++|.++.++++++.+||++..||++++++|++|+|.+.|+|+|
T Consensus 256 vPyP~QwG~P~f~~~~~f~m~aa~~va~iES~G~y~a~ar~~~a~ppP~~~inRgi~~eGig~lL~gl~G~gtG~Tt~~E 335 (510)
T KOG1292|consen 256 VPYPFQWGPPTFSAGLVFAMMAASLVAMIESTGDYIACARLSSATPPPPSVLNRGIGWEGIGSLLAGLFGTGTGSTTSVE 335 (510)
T ss_pred ecCCCccCCCcccHHHHHHHHHHHHHHHHHhcchHHHHHHHhcCCCCChhhhhhhhhhhhHHHHHHHhhCCCccceeecc
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred chhhhhcccccchHHHHHHHHHHHHHHhhhhhhhhhhcccccCCchhhhhhhHHHHHH-HHHHhhhhh
Q 021712 237 NVHTISITKVASRRAVQLGAVFMIVFSFEKSVPFWPLYHRHWLPPYCASCGPLLWQLV-SQICSILNQ 303 (308)
Q Consensus 237 nvg~i~~t~~~sr~~~~~ag~~li~lgl~p~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 303 (308)
|+|++++||++|||++++++.|++++|++.||+|+.+..+. |..+.-...+|.++ +-+.|-|.-
T Consensus 336 Nigll~vTKVgSRrvvQ~aa~fmI~~~i~gKFgA~fAsIP~---piv~~l~c~~~~mv~avgLSnLQf 400 (510)
T KOG1292|consen 336 NIGLLGVTKVGSRRVVQIAAGFMIFFGIFGKFGAFFASIPD---PIVGGLLCILFGMVGAVGLSNLQF 400 (510)
T ss_pred ceeeEeeeeeeeeeehhhhHHHHHHHHHHHHHHHHHHcCcH---HHHHHHHHHHHHHHHHHhhhhhee
Confidence 99999999999999999999999999999999999997655 66666666688887 666665543
No 2
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.3e-44 Score=351.66 Aligned_cols=264 Identities=22% Similarity=0.384 Sum_probs=227.7
Q ss_pred ChhHHHHHHHHHHHHHHHHhhhHHH-HHHhhcCcccHHHHHHHHHhhhhhhhccCCC------CcccchHHHHHHHHHHH
Q 021712 1 MRELQGAIIVGSIFQSILGFTGLMS-LFLRLINPVVVAPTVAAIGLAFFSYGFPQAG------SCVEISIPQILLVLIFA 73 (308)
Q Consensus 1 ~~~~~GavlvaGll~illg~tg~~~-~l~~~~Pp~V~g~~l~lIGl~l~~~~~~~~g------s~~~i~~~~~~lv~~v~ 73 (308)
++.++|+++.+|+++++++. +++ |++|+|||+|+|.+++.||++|++.++++.+ +..+...+....+...+
T Consensus 105 ~~~~~G~ii~ag~~~~li~~--~~~~~l~rlfPPvVtG~Vi~~IGlsL~~vai~~~~G~~~~~~~~~~~~~~~l~la~~t 182 (451)
T COG2233 105 IAALLGGIIAAGLVYFLISP--IVKIRLARLFPPVVTGPVVLVIGLSLAPVAINMAGGGPGAAGNPDFGSLENLGLALVT 182 (451)
T ss_pred hHHHHHHHHHHHHHHHHHHH--HHHHHHHHhCCCceEEeEeeeehhhhHHHHHHHhhCCCCCCCCcccCchhHHHHHHHH
Confidence 46789999999999999987 667 9999999999999999999999998876532 11111111111111122
Q ss_pred HH-HHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhhccccccccccccccccC
Q 021712 74 LY-LRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTA 152 (308)
Q Consensus 74 l~-~~~~~~~~k~~~~~~~iLigivvg~~~a~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~~ 152 (308)
+. +..++++.|+++|++|+++|+++||++++.+ |.+ |++ .+.++
T Consensus 183 l~~il~~~~f~~g~~~~i~ILiGlv~G~~la~~~---G~v-------------------------------df~-~v~~a 227 (451)
T COG2233 183 LLIILLINRFGKGFLRRIPILIGLVVGYLLALFM---GMV-------------------------------DFS-GVAEA 227 (451)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh---CCc-------------------------------Ccc-ccccC
Confidence 22 3357889999999999999999999999999 643 666 67899
Q ss_pred cccccCcccccCCCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhHhCCCCCCcccccccchhhchHHHHHhhhCCCCCCC
Q 021712 153 AWVRIPYPLQWGIPIFHLRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSS 232 (308)
Q Consensus 153 ~~f~~P~~~~fg~P~f~~~~il~~~~~~lv~~~es~g~~~av~~~~~~~~~~~~~i~r~l~adGl~tilagl~Gtg~~~t 232 (308)
|||++|.+++|+. +||+.+++++++.+++++.|++||+.|++++++++...+++++|++++||++|+++|+||+ +|+|
T Consensus 228 ~w~~~P~~~~fg~-~F~~~ail~m~~v~iV~~~E~~G~i~A~~~itg~~~~~~~~l~rg~~aDGlat~iag~fg~-~p~T 305 (451)
T COG2233 228 PWFALPTPFYFGM-AFDWGAILTMLPVAIVTIVEHTGDITATGEITGRDLDGKPRLRRGLLADGLATLIAGLFGG-FPNT 305 (451)
T ss_pred ceeeCCcccCCCe-eecHHHHHHHHHHHHHHHHHHhhhhhhHHhHhCCcCccCcccccceeeccHHHHHHHhcCC-CCCC
Confidence 9999999999999 9999999999999999999999999999999996654457899999999999999999997 9999
Q ss_pred ccccchhhhhcccccchHHHHHHHHHHHHHHhhhhhhhhhhcccccCCchhhhhhhHHHHHH-HHHHhhhhhccc
Q 021712 233 TLTENVHTISITKVASRRAVQLGAVFMIVFSFEKSVPFWPLYHRHWLPPYCASCGPLLWQLV-SQICSILNQQAF 306 (308)
Q Consensus 233 ~~senvg~i~~t~~~sr~~~~~ag~~li~lgl~p~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 306 (308)
+|+||+|++++||++|||++.+++++++++|++||++++.+..+. |......-++|+++ +++..||.|.||
T Consensus 306 tfaqNiGvv~lT~v~Sr~V~~~aavili~lgl~pk~~al~~sIP~---pVlGGa~ivmFG~Ia~sGir~l~~~~~ 377 (451)
T COG2233 306 TFAQNIGVVALTGVYSRYVIAGAAVILILLGLFPKFGALIQSIPS---PVLGGAMLVLFGMIAASGIRILIRNKV 377 (451)
T ss_pred chhhceeeeeeccCChhHHHHHHHHHHHHHHhhHHHHHHHHhCCh---hhhhHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999998777 77777788899998 999999999876
No 3
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=100.00 E-value=5.8e-41 Score=328.50 Aligned_cols=259 Identities=16% Similarity=0.212 Sum_probs=210.5
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHHHHhhhhhhhccCC-CC-------cccchHHHHHHHHHHHHH
Q 021712 4 LQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQA-GS-------CVEISIPQILLVLIFALY 75 (308)
Q Consensus 4 ~~GavlvaGll~illg~tg~~~~l~~~~Pp~V~g~~l~lIGl~l~~~~~~~~-gs-------~~~i~~~~~~lv~~v~l~ 75 (308)
.+|+++++|++++++|.+|+++|++|+|||+|+|+++++||+++++.++++. |. ..+.......+...+...
T Consensus 103 l~g~~i~~g~~~~~lg~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~~a~~~~~G~~~~~~~~~~~~~~~~~~~a~~~l~~ 182 (433)
T PRK11412 103 LAVGIALSGVVTILIGFSGLGHRLARLFTPMVMVVFMLLLGAQLTTIFFKGMLGLPFGIADPNGKIQLPPFGLSVAVMCL 182 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhHHHHHHhhHHHHHHHhcCCCccCcccccccchHHHHHHHHHHHH
Confidence 4557999999999999999999999999999999999999999999877642 21 111111111122122222
Q ss_pred HHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhhccccccccccccccccCccc
Q 021712 76 LRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAWV 155 (308)
Q Consensus 76 ~~~~~~~~k~~~~~~~iLigivvg~~~a~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~~~~f 155 (308)
+..+++++|+++|++++++|+++||+++.+.. |. |++ .+.+++|.
T Consensus 183 il~~~~~~~g~~~~~svLiGiv~G~v~a~~~~--g~--------------------------------d~~-~v~~a~w~ 227 (433)
T PRK11412 183 VLAMIIFLPQRIARYSLLVGTIVGWILWAFCF--PS--------------------------------SHS-LSGELHWQ 227 (433)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHh--CC--------------------------------Ccc-hhccCCce
Confidence 34567799999999999999999999865431 32 233 34667785
Q ss_pred ccCcccccCCCc-chHHHHHHHHHHHHHHHHHhhhhHHHHHhHhCCCCCCcccccccchhhchHHHHHhhhCCCCCCCcc
Q 021712 156 RIPYPLQWGIPI-FHLRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTL 234 (308)
Q Consensus 156 ~~P~~~~fg~P~-f~~~~il~~~~~~lv~~~es~g~~~av~~~~~~~~~~~~~i~r~l~adGl~tilagl~Gtg~~~t~~ 234 (308)
. ++|+.|+ ||+.+++++++.+++.+.|++||+.+++|.++++.+++++++|++.+||++|+++|+||+ .|+|+|
T Consensus 228 ~----~pfG~P~~F~~~~il~~~~~~lv~~~e~iG~~~a~~~~~~~~~~~~~~l~rgi~~dGi~s~laglfg~-~p~tt~ 302 (433)
T PRK11412 228 W----FPLGSGGALEPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAV-IPFSPF 302 (433)
T ss_pred e----ecCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccccchhhccHHHHHHHhcCC-CCCCch
Confidence 3 4589995 999999999999999999999999999999986655467899999999999999999996 999999
Q ss_pred ccchhhhhcccccchHHHHHHHHHHHHHHhhhhhhhhhhcccccCCchhhhhhhH--HHHHH-HHHHhhhhhcccC
Q 021712 235 TENVHTISITKVASRRAVQLGAVFMIVFSFEKSVPFWPLYHRHWLPPYCASCGPL--LWQLV-SQICSILNQQAFG 307 (308)
Q Consensus 235 senvg~i~~t~~~sr~~~~~ag~~li~lgl~p~~~a~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~ 307 (308)
+||+|++++||++||++..++|++++++||+||++++.... |.++.++.+ +|.++ ..+.+++.|.||.
T Consensus 303 sqNvGvi~~TgV~SR~v~~~aa~ilillgl~PK~~alia~I-----P~pVlGg~~~~~Fg~I~~~Gi~~l~~~~~~ 373 (433)
T PRK11412 303 VSSIGLLTQTGDYRRRSFIYGSVMCLLVALIPALTRLFCSI-----PLPVSSAVMLVSYLPLLGSALVFSQQITFT 373 (433)
T ss_pred hhhhhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-----CHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999874 445555444 67666 8888999998874
No 4
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=100.00 E-value=4.1e-39 Score=312.86 Aligned_cols=266 Identities=28% Similarity=0.461 Sum_probs=194.0
Q ss_pred ChhHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHHHHhhhhhhhccCCCCcc---c---chHH-HHHHHHHHH
Q 021712 1 MRELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGSCV---E---ISIP-QILLVLIFA 73 (308)
Q Consensus 1 ~~~~~GavlvaGll~illg~tg~~~~l~~~~Pp~V~g~~l~lIGl~l~~~~~~~~gs~~---~---i~~~-~~~lv~~v~ 73 (308)
+|+++|+++++|+++++++++|.++|++|+|||.|.|.++++||+++.+.++++.+..+ + ...+ .........
T Consensus 89 ~~~~~g~~~i~gi~~~~l~~~g~~~~l~~~~pp~v~g~v~~~IGl~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (389)
T PF00860_consen 89 LQAALGAVLISGILFILLGLTGLRKRLRRLFPPVVKGAVVLLIGLSLAPIGLKNAGGIWGNPDGLLVGDGKNLGLAVLTL 168 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT-SH-HHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSS---BTT-B---HHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHHHHhchHHHHHHHhChhheEeeEeeehhhhhhhHhhccccccccccccccccccccccccccc
Confidence 37899999999999999999999999999999999999999999999988877653221 1 1111 111111111
Q ss_pred HHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhhccccccccccccc-cccC
Q 021712 74 LYLRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNA-WRTA 152 (308)
Q Consensus 74 l~~~~~~~~~k~~~~~~~iLigivvg~~~a~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-v~~~ 152 (308)
.....++.+.|+++|++++++|+++||++++.++ .+ |++ + +.++
T Consensus 169 ~~~~~~~~~~~~~~~~~ailigi~~g~i~~~~~g---~~-------------------------------~~~-~~~~~~ 213 (389)
T PF00860_consen 169 LFILLLSLFLKGFLRKGAILIGIIAGWIVAAILG---VV-------------------------------DFS-PSVSSA 213 (389)
T ss_dssp HHHHHHHHSSSTTTTTHHHHHHHHHHHHHHHHHH---HT-------------------------------TSS-H-HHHS
T ss_pred hhhhhhhhhhhhhcccccchhhhhhhhhhhhccc---cc-------------------------------ccC-cccccc
Confidence 1233456788999999999999999999999994 33 344 3 6789
Q ss_pred cccccCcccccCCCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhHhCCCCCCcccccccchhhchHHHHHhhhCCCCCCC
Q 021712 153 AWVRIPYPLQWGIPIFHLRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSS 232 (308)
Q Consensus 153 ~~f~~P~~~~fg~P~f~~~~il~~~~~~lv~~~es~g~~~av~~~~~~~~~~~~~i~r~l~adGl~tilagl~Gtg~~~t 232 (308)
||+++|++++|+.|+||+..++.+++.++++++|++||+.+++|..++++++++++||++.+||++|+++|++|+ .|+|
T Consensus 214 ~~~~~p~~~~~g~p~f~~~~i~~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~~~r~l~~dg~~~~l~gl~G~-~~~t 292 (389)
T PF00860_consen 214 PWFSLPSPFPFGWPSFDPGAILTFLIFALVAMFESIGTIVAVARIAGKDDPRPPRIRRGLLADGLGTILAGLFGT-SPTT 292 (389)
T ss_dssp -SS--------------HHHHHHHTHHHHHHHHHHHHHHHHHHHHHTS-TCCCCCHHHHHHHHHHHHHHHHHHT----EE
T ss_pred cccccccccccccccccHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCCccchhhcccceeeeeeeeechhhcC-CCCc
Confidence 999999999999999999999999999999999999999999999986655578899999999999999999997 9999
Q ss_pred ccccchhhhhcccccchHHHHHHHHHHHHHHhhhhhhhhhhcccccCCchhhhhhhH--HHHHH-HHHHhhhhhcccC
Q 021712 233 TLTENVHTISITKVASRRAVQLGAVFMIVFSFEKSVPFWPLYHRHWLPPYCASCGPL--LWQLV-SQICSILNQQAFG 307 (308)
Q Consensus 233 ~~senvg~i~~t~~~sr~~~~~ag~~li~lgl~p~~~a~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~ 307 (308)
+|+||+|+++.||++|||+...+++++++++++||++.+... .|-.+.++++ ++... .++.+.+++.|+.
T Consensus 293 ~~~en~g~i~~t~v~Sr~~~~~a~~~~i~~~~~p~~~~l~~~-----IP~~v~gg~~lv~~g~i~~~gi~~i~~~~~~ 365 (389)
T PF00860_consen 293 TYSENAGGIAATGVASRRVGLTAGVILILFGLSPKFAPLFAS-----IPSPVIGGPLLVLFGMIMMSGIRNIDWVDLD 365 (389)
T ss_dssp E-HHHHHHHHHHTB--HHHHHHHHHHHHHHT--HHHHHHHTT-----S-HHHHHHHHHHHHHHHHHHHHHHHHHTTS-
T ss_pred cccccchhhhhhccccceeeeHHHHHHHHHhhHHHHHHHHHH-----HHHHHhccchHHHHHHHHHHHhHhheecccC
Confidence 999999999999999999999999999999999999999886 4555644443 44444 8888888888874
No 5
>PRK10720 uracil transporter; Provisional
Probab=100.00 E-value=1.2e-37 Score=305.85 Aligned_cols=264 Identities=19% Similarity=0.279 Sum_probs=213.3
Q ss_pred ChhHHHHHHHHHHHHHHHHhhh--H-HHHHHhhcCcccHHHHHHHHHhhhhhhhccCCCCcc----cchHHHHHHHHHHH
Q 021712 1 MRELQGAIIVGSIFQSILGFTG--L-MSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGSCV----EISIPQILLVLIFA 73 (308)
Q Consensus 1 ~~~~~GavlvaGll~illg~tg--~-~~~l~~~~Pp~V~g~~l~lIGl~l~~~~~~~~gs~~----~i~~~~~~lv~~v~ 73 (308)
+|+++|+++++|+++++++++. + ++|++|+|||.++|.++++||+++.+.++++.|... ....+. .++.+++
T Consensus 86 ~~~~lgav~v~Glv~ills~~~~~~g~~~l~~~fPp~v~G~~i~lIGl~L~~~~~~~~g~~~~~~~~~~~~~-~~lalv~ 164 (428)
T PRK10720 86 YEVALGGFIMCGVLFCLVALIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKT-IIISMVT 164 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChHHHHHHHHHHHHHhHHHHHhhccccCCCCcccchHH-HHHHHHH
Confidence 3789999999999999999862 1 789999999999999999999999988876543211 111111 2222222
Q ss_pred HH-HHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhhccccccccccccccccC
Q 021712 74 LY-LRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTA 152 (308)
Q Consensus 74 l~-~~~~~~~~k~~~~~~~iLigivvg~~~a~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~~ 152 (308)
+. +..++++.||++|++|+++|+++||++++.+ |.. |++ .+.++
T Consensus 165 l~iil~~~~~~kg~~~~~~iLigIvvG~ila~~l---G~~-------------------------------d~~-~v~~a 209 (428)
T PRK10720 165 LAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAM---GMV-------------------------------DTT-PIIEA 209 (428)
T ss_pred HHHHHHHHHHhccHHHHhHHHHHHHHHHHHHHHh---cCC-------------------------------CHH-HhhcC
Confidence 22 2235667899999999999999999999988 543 343 45668
Q ss_pred cccccCcccccCCCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhHhCCCCCCcccccccchhhchHHHHHhhhCCCCCCC
Q 021712 153 AWVRIPYPLQWGIPIFHLRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSS 232 (308)
Q Consensus 153 ~~f~~P~~~~fg~P~f~~~~il~~~~~~lv~~~es~g~~~av~~~~~~~~~~~~~i~r~l~adGl~tilagl~Gtg~~~t 232 (308)
+|+++| +|+.|+||+..++.+++.+++.++|++|++.++++..+++..++++.||++.+||++|+++|+||+ +|+|
T Consensus 210 ~~~~lP---~~~~P~fd~~~il~l~~~~lv~~~EsiG~~~a~~~~~~~~~~~~~~~~r~l~adGlatii~glfG~-~p~t 285 (428)
T PRK10720 210 HWFALP---TFYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGS-TPNT 285 (428)
T ss_pred ccccCC---CCCCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCccccchHhhhhHHHHHHHhcCC-CCcc
Confidence 899999 466799999999999999999999999999999999875433456789999999999999999996 9999
Q ss_pred ccccchhhhhcccccchHHHHHHHHHHHHHHhhhhhhhhhhcccccCCchhhhhhhHHHHHH-HHHHhhh--hhcccC
Q 021712 233 TLTENVHTISITKVASRRAVQLGAVFMIVFSFEKSVPFWPLYHRHWLPPYCASCGPLLWQLV-SQICSIL--NQQAFG 307 (308)
Q Consensus 233 ~~senvg~i~~t~~~sr~~~~~ag~~li~lgl~p~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~ 307 (308)
+|+||+|+++.||++||++..++++++++++++||++++....+. |....+.-.+|.++ ..+.+++ +|.||-
T Consensus 286 ty~en~g~ia~T~v~sr~v~~~a~~~li~lg~~pk~~a~ia~iP~---pVlgg~~i~~fg~i~~~Gi~~l~~~~~~~~ 360 (428)
T PRK10720 286 TYGENIGVMAITRVYSTWVIGGAAIIAILLSCVGKLAAAIQAIPL---PVMGGVSLLLYGVIGASGIRVLIESKVDYN 360 (428)
T ss_pred ccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999999999999999999999887444 33333333466665 8889999 888874
No 6
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=100.00 E-value=2.9e-37 Score=303.13 Aligned_cols=265 Identities=21% Similarity=0.354 Sum_probs=212.8
Q ss_pred hhHHHHHHHHHHHHHHHHhhhHH---HHHHhhcCcccHHHHHHHHHhhhhhhhccCCCCcccchHHHHHHHHHHHHHHHH
Q 021712 2 RELQGAIIVGSIFQSILGFTGLM---SLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGSCVEISIPQILLVLIFALYLRG 78 (308)
Q Consensus 2 ~~~~GavlvaGll~illg~tg~~---~~l~~~~Pp~V~g~~l~lIGl~l~~~~~~~~gs~~~i~~~~~~lv~~v~l~~~~ 78 (308)
++++|+++++|++++++++++.+ ++++|+|||+|+|.++++||+++++.++++.+.. +...+.. ++.++. +..
T Consensus 110 ~~a~ga~iv~G~i~~llg~~~~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~vg~~~~~~~-~~~~~~a-l~tl~~--i~l 185 (429)
T TIGR03616 110 ALALGGIIACGLVYAAIGLVVMRTGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSVSAS-GFDSWMA-VLTILC--IGA 185 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHhcccc-ccccHHH-HHHHHH--HHH
Confidence 67899999999999999998655 8999999999999999999999999988764321 1111211 111111 123
Q ss_pred HHHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhhccccccccccccccccCcccccC
Q 021712 79 ISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAWVRIP 158 (308)
Q Consensus 79 ~~~~~k~~~~~~~iLigivvg~~~a~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~~~~f~~P 158 (308)
+.++.|+++|++++++|+++||++++.+. +.+..+ ++.|++ ++.+++|+++|
T Consensus 186 ~~l~~~~~l~~~avLiGivvG~iva~~l~--~~~g~~-------------------------~~vd~s-~v~~a~~~~lP 237 (429)
T TIGR03616 186 VAVFTRGMLQRLLILVGLIAAYLAYFILT--NVFGLG-------------------------KAVDFS-PISQAAWFGLP 237 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhcCCC-------------------------ccccCc-ccccCccccCC
Confidence 46688999999999999999999998763 111100 124666 67788999999
Q ss_pred cccccCCCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhHhCCCCCCcccccccchhhchHHHHHhhhCCCCCCCccccch
Q 021712 159 YPLQWGIPIFHLRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTLTENV 238 (308)
Q Consensus 159 ~~~~fg~P~f~~~~il~~~~~~lv~~~es~g~~~av~~~~~~~~~~~~~i~r~l~adGl~tilagl~Gtg~~~t~~senv 238 (308)
+|+.|+||++.++.+++.++++++|++||+.++++.++++ .++ ++||++.+||++|+++|++|+ .|+|+|+||+
T Consensus 238 ---~~~~p~f~~~~il~~~~~~lv~~~esiG~~~a~~~~~~~~-~~~-~i~r~l~adGl~t~~agl~g~-~p~tt~~en~ 311 (429)
T TIGR03616 238 ---NFHTPVFNANAMLLIAPVALILVAENLGHFKAVAGMTGRN-LDP-YMGRAFVGDGLATMLSGSVGG-TGVTTYAENI 311 (429)
T ss_pred ---cCCCceEcHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCC-CCc-hhccchhhhhHHHHHHHhcCC-CCCcceeeee
Confidence 5788999999999999999999999999999999998744 333 589999999999999999996 9999999999
Q ss_pred hhhhcccccchHHHHHHHHHHHHHHhhhhhhhhhhcccccCCchhhhhhhHHHHHH-HHHHhhh--hhcccC
Q 021712 239 HTISITKVASRRAVQLGAVFMIVFSFEKSVPFWPLYHRHWLPPYCASCGPLLWQLV-SQICSIL--NQQAFG 307 (308)
Q Consensus 239 g~i~~t~~~sr~~~~~ag~~li~lgl~p~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~ 307 (308)
|+++.||++||++...+++++++++++||++++....+. |..+.+.-.+|.++ ..+.+++ ++.||.
T Consensus 312 g~i~~T~v~SR~v~~~a~~~lillgl~Pk~~al~~~IP~---pVlgG~~i~~fg~i~~~Gi~~l~~~~~d~~ 380 (429)
T TIGR03616 312 GVMAVTKVYSTLVFVAAAVFAILLGFSPKFGALIHTIPV---AVLGGASIVVFGLIAVAGARIWVQNKVDLT 380 (429)
T ss_pred eeeeecCcchHHHHHHHHHHHHHHHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHHHHHHHhccCCcC
Confidence 999999999999999999999999999999999887443 33333333466665 7888888 666764
No 7
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=100.00 E-value=2e-36 Score=296.32 Aligned_cols=266 Identities=23% Similarity=0.407 Sum_probs=214.6
Q ss_pred hhHHHHHHHHHHHHHHHHhh--h-HHHHHHhhcCcccHHHHHHHHHhhhhhhhccCCCC------cccchHHHHHHHHHH
Q 021712 2 RELQGAIIVGSIFQSILGFT--G-LMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGS------CVEISIPQILLVLIF 72 (308)
Q Consensus 2 ~~~~GavlvaGll~illg~t--g-~~~~l~~~~Pp~V~g~~l~lIGl~l~~~~~~~~gs------~~~i~~~~~~lv~~v 72 (308)
|+++|+++++|+++++++.+ + .++|++|+|||.++|.++++||+++.+.++++.+. ..+...+....+.++
T Consensus 91 ~~~~g~~i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv~~IGl~L~~i~l~~~~g~~~~~~~~~~~~~~~~~vg~~ 170 (415)
T TIGR00801 91 PAIMGALIATGLVYTLLSLLIKKLGPRWLMKLFPPVVTGPVVMLIGLSLIPVAVKMAAGGEAAMSSATYGSLENLGVAFV 170 (415)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchhHHHhHHHHHHHHHHHHHHHhccCCCcccccccCchhhHHHHHH
Confidence 68999999999999999975 3 46789999999999999999999999988776421 111111111112222
Q ss_pred HHH-HHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhhcccccccccccccccc
Q 021712 73 ALY-LRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRT 151 (308)
Q Consensus 73 ~l~-~~~~~~~~k~~~~~~~iLigivvg~~~a~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~ 151 (308)
++. +..++++.|+++|++++++++++||++++.+ |.. |++ .+.+
T Consensus 171 ~l~~~vl~~~~~~g~~~~~aiLigiv~g~i~a~~l---g~~-------------------------------~~~-~v~~ 215 (415)
T TIGR00801 171 VLALIILLNRFGKGFLKSISILIGILVGYILALFM---GIV-------------------------------DFS-PVID 215 (415)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHc---CCc-------------------------------cch-hhcc
Confidence 222 3356778899999999999999999999988 543 333 3466
Q ss_pred CcccccCcccccCCCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhHhCCCCCCcccccccchhhchHHHHHhhhCCCCCC
Q 021712 152 AAWVRIPYPLQWGIPIFHLRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGS 231 (308)
Q Consensus 152 ~~~f~~P~~~~fg~P~f~~~~il~~~~~~lv~~~es~g~~~av~~~~~~~~~~~~~i~r~l~adGl~tilagl~Gtg~~~ 231 (308)
.||+++|.+++|+ |+||+..+..++++++++++|++|++.++++.+|++.++++++||++.+||++|+++|++|+ .|+
T Consensus 216 ~~~~~lP~~~~~g-~~f~~~~~~~~~~i~lv~~~es~g~~~a~a~~~g~~~~~~~~~~r~l~adGl~~i~aglfG~-~p~ 293 (415)
T TIGR00801 216 APWFSLPTPFTFG-PSFEWPAILTMLPVAIVSLVESIGDITATADVSGRDLSGDPRLHRGVLADGLATLLAGLFGG-FPN 293 (415)
T ss_pred CcccccCCccCCC-ceecHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCCCCCccccchHHHhhHHHHHHHhcCC-CCC
Confidence 7899999888887 79999999999999999999999999999999985433266789999999999999999996 999
Q ss_pred CccccchhhhhcccccchHHHHHHHHHHHHHHhhhhhhhhhhcccccCCchhhhhhhHHHHHH-HHHHhhhhhcccC
Q 021712 232 STLTENVHTISITKVASRRAVQLGAVFMIVFSFEKSVPFWPLYHRHWLPPYCASCGPLLWQLV-SQICSILNQQAFG 307 (308)
Q Consensus 232 t~~senvg~i~~t~~~sr~~~~~ag~~li~lgl~p~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 307 (308)
|+|+||+|+++.||++||++..++++++++++++||++++..+.+. |..+...-.+|.++ ..+.+++-+.++.
T Consensus 294 t~~sen~g~~~~T~~~sr~~~~~~a~~~i~~~l~pk~~~l~~~iP~---~vlgg~~l~~~~~i~~~gi~~l~~~~~~ 367 (415)
T TIGR00801 294 TTFAQNIGVIALTRVASRWVIVGAAVILIALGFFPKIAALITSIPS---PVLGGASIVMFGMIAASGIRILIRNKLD 367 (415)
T ss_pred cchhhhheeeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHHHHHHHhCccC
Confidence 9999999999999999999999999999999999999999887444 44444444456655 7788888776653
No 8
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=100.00 E-value=2.7e-35 Score=287.49 Aligned_cols=261 Identities=25% Similarity=0.405 Sum_probs=212.2
Q ss_pred ChhHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHHHHhhhhhhhccCCCC------cccchHHHHHHHHHHHH
Q 021712 1 MRELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGS------CVEISIPQILLVLIFAL 74 (308)
Q Consensus 1 ~~~~~GavlvaGll~illg~tg~~~~l~~~~Pp~V~g~~l~lIGl~l~~~~~~~~gs------~~~i~~~~~~lv~~v~l 74 (308)
+++++|+++++|++++++| ++++|++|+|||.++|.++++||+++.+.++++... ..+...+.+.++.++.
T Consensus 82 ~~~~~ga~~v~Gii~illg--~~~~~l~~~iPp~v~G~~i~~IGl~l~~~~~~~~~g~~~~~~~~~~~~~~l~l~~l~~- 158 (406)
T TIGR03173 82 LGAIFGAVIVAGLFVILLA--PFFSKLVRFFPPVVTGTVITLIGLSLMPVAINWAAGGAGAPDFGSPQNLGLALLTLVI- 158 (406)
T ss_pred HHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHhccCCCcccccchHHHHHHHHHHHH-
Confidence 3789999999999999999 489999999999999999999999999877754321 0111111222222221
Q ss_pred HHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhhccccccccccccccccCcc
Q 021712 75 YLRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAW 154 (308)
Q Consensus 75 ~~~~~~~~~k~~~~~~~iLigivvg~~~a~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~~~~ 154 (308)
+..++++.||++|++++++++++||++++.+ |.. |++ .+.+.+|
T Consensus 159 -~il~~~~~~~~~~~~aiLi~ivvg~iva~~~---g~~-------------------------------~~~-~i~~~~~ 202 (406)
T TIGR03173 159 -ILLLNRFGKGFLRSIAVLLGLVVGTIVAAAL---GMV-------------------------------DFS-GVAEAPW 202 (406)
T ss_pred -HHHHHHHhhhHHHHhHHHHHHHHHHHHHHHh---cCC-------------------------------Cch-hhccCCe
Confidence 2345677888999999999999999999988 543 333 3456789
Q ss_pred cccCcccccCCCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhHhCCCCCCcccccccchhhchHHHHHhhhCCCCCCCcc
Q 021712 155 VRIPYPLQWGIPIFHLRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTL 234 (308)
Q Consensus 155 f~~P~~~~fg~P~f~~~~il~~~~~~lv~~~es~g~~~av~~~~~~~~~~~~~i~r~l~adGl~tilagl~Gtg~~~t~~ 234 (308)
+++|.+++|+.|+||+..+..++.+++++++|++|+..++++..++ +.|++++||++.+||++|+++|++|+ +|+|+|
T Consensus 203 ~~~P~~~~~~~P~f~~~~~~~~~~~~lv~~~esig~~~a~~~~~g~-~~~~~~~~~~l~~~Gi~~i~aglfG~-~p~t~~ 280 (406)
T TIGR03173 203 FALPTPFHFGAPTFDLVAILTMIIVYLVSMVETTGDFLALGEITGR-PITEKDLAGGLRADGLGSALGGLFNT-FPYTSF 280 (406)
T ss_pred eeCCCCCcCCCCeeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCCchhccchHHhccHHHHHHHHhCC-CCCcch
Confidence 9999888899999999999999999999999999999999999874 44567899999999999999999996 999999
Q ss_pred ccchhhhhcccccchHHHHHHHHHHHHHHhhhhhhhhhhcccccCCchhhhhhhH--HHHHH-HHHHhhhhhcccC
Q 021712 235 TENVHTISITKVASRRAVQLGAVFMIVFSFEKSVPFWPLYHRHWLPPYCASCGPL--LWQLV-SQICSILNQQAFG 307 (308)
Q Consensus 235 senvg~i~~t~~~sr~~~~~ag~~li~lgl~p~~~a~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~ 307 (308)
+||++.++.||.+||++...+|+++++++++||++++..+ -|..+.++.+ +|.+. ..+.+++.+.|+.
T Consensus 281 ~~~~~~~~~tg~~sr~~~~~~~~~lil~~l~~~~~~l~~~-----iP~~vlgg~~l~~~~~i~~~g~~~l~~~~~~ 351 (406)
T TIGR03173 281 SQNVGLVQLTGVKSRYVVAAAGVILVLLGLFPKLAALVAS-----IPQPVLGGAGLVMFGMVAASGIRILSKVDFD 351 (406)
T ss_pred hhhHHHHHHhCCCchHhHHHHHHHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999999999999999999987 3445555444 44444 7777788777764
No 9
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism]
Probab=99.85 E-value=4.7e-20 Score=179.00 Aligned_cols=253 Identities=20% Similarity=0.279 Sum_probs=175.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHHHHhhhhhhhccCCCC-------cc---cchHHHHHHHHH
Q 021712 2 RELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGS-------CV---EISIPQILLVLI 71 (308)
Q Consensus 2 ~~~~GavlvaGll~illg~tg~~~~l~~~~Pp~V~g~~l~lIGl~l~~~~~~~~gs-------~~---~i~~~~~~lv~~ 71 (308)
|+++|+++++|+++++++++|+|+|++|.+|....-.+...||+.+.-+++++.|- .. ++..|...+ .+
T Consensus 102 q~AL~aVF~sGiif~ils~t~iR~~ii~~IP~~lk~ai~aGIGlFia~IgL~~~Givv~~~~tlv~LG~~~~p~vll-~i 180 (436)
T COG2252 102 QVALGAVFLSGIIFLLLSLTGIREWIINAIPRSLKLAIGAGIGLFIALIGLKNAGIVVANPATLVALGDFTSPGVLL-AI 180 (436)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhCCeEEecCcceEEeecCCCchHHH-HH
Confidence 78999999999999999999999999999998665555555555444444433221 00 111222111 12
Q ss_pred HHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCccCCCC-CCCCCCCccchhhhhhhhccccccccccccccc
Q 021712 72 FALYLRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGC-SPDIPSSNILSDACIKHAYTMKHCRTDVSNAWR 150 (308)
Q Consensus 72 v~l~~~~~~~~~k~~~~~~~iLigivvg~~~a~~l~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~ 150 (308)
+.+.+. .-...+++ +-++++++...+++++.+ |.....+. ....| +..
T Consensus 181 ~G~~l~-~~L~~~~i--~Gaili~i~~~t~~g~~~---g~~~~~~~~~~~~p---------------------~~~---- 229 (436)
T COG2252 181 LGLLLI-IVLVSRKI--KGAILIGILVTTILGIIL---GIDVHFGGLVGAPP---------------------SLS---- 229 (436)
T ss_pred HHHHHH-HHHHHhhc--cHhhhHHHHHHHHHHHHh---cccccccccccCCC---------------------Ccc----
Confidence 221110 01112222 347999999999999998 53321110 00000 000
Q ss_pred cCcccccCcccccCCC--cchHHHHHHHHHHHHHHHHHhhhhHHHHHhHhCCC--CCCcccccccchhhchHHHHHhhhC
Q 021712 151 TAAWVRIPYPLQWGIP--IFHLRTSLIMIIVSLVASVDSVGTYHTASLLVNSK--PPTPRIVSRGIGMEGFCSILAGLWG 226 (308)
Q Consensus 151 ~~~~f~~P~~~~fg~P--~f~~~~il~~~~~~lv~~~es~g~~~av~~~~~~~--~~~~~~i~r~l~adGl~tilagl~G 226 (308)
|...+.+.. ...++....++.+.+++.+|++|++.++++.++.. +...++.+|.+.+|++++++++++|
T Consensus 230 -------~~~~~~d~~~~~~~~~~~~~if~f~~~~~FD~~GTl~gv~~~ag~~~~~g~~~~~~~al~~D~v~t~~ga~~G 302 (436)
T COG2252 230 -------PIFGQLDLSGNLSLAAFAPVIFTFFFVDLFDTLGTLIGVASKAGLLDKNGKMPRIGKALLADSVATVVGALFG 302 (436)
T ss_pred -------chhhHhhhccchhhHHHHHHHHHHHHHHHhcchHHHHHHHHhcCCcCCCCCccccchHHHHhHHHHHHHHhcC
Confidence 111111111 12245566778999999999999999999999832 3334688999999999999999999
Q ss_pred CCCCCCccccchhhhhcccccchHHHHHHHHHHHHHHhhhhhhhhhhcccccCCchhhhhhhHHHHHHHHH
Q 021712 227 SGTGSSTLTENVHTISITKVASRRAVQLGAVFMIVFSFEKSVPFWPLYHRHWLPPYCASCGPLLWQLVSQI 297 (308)
Q Consensus 227 tg~~~t~~senvg~i~~t~~~sr~~~~~ag~~li~lgl~p~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (308)
+ ++.|+|.|+...++.+++++...+.++-.|++.+.+.|..+.+|.++++ |.+.--+.++-+.+.++
T Consensus 303 t-S~~t~yIESaaGva~GgrTGltavv~g~lFl~~lf~~Pl~~~vP~~Ata---paLi~vG~lM~~~v~~i 369 (436)
T COG2252 303 T-STVTAYIESAAGVAAGGRTGLTAVVTGLLFLLSLFFSPLAALVPGYATA---PALIIVGALMLSSVKQI 369 (436)
T ss_pred C-cchhhhhhcccccccccccccHHHHHHHHHHHHHHHHHHHHhCcHhhhh---HHHHHHHHHHHhhhccC
Confidence 8 9999999999999999999999999999999999999999999999998 76666666655544433
No 10
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=99.77 E-value=2.5e-17 Score=159.25 Aligned_cols=243 Identities=19% Similarity=0.235 Sum_probs=174.4
Q ss_pred ChhHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHHHHhhhhhhhccCCCCcccchHHHHHHHHHHHHHHHHHH
Q 021712 1 MRELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGSCVEISIPQILLVLIFALYLRGIS 80 (308)
Q Consensus 1 ~~~~~GavlvaGll~illg~tg~~~~l~~~~Pp~V~g~~l~lIGl~l~~~~~~~~gs~~~i~~~~~~lv~~v~l~~~~~~ 80 (308)
+.|+.|+.+++|++.+++|++|+++|++|++|+.+.+.+++.+.+.+ +++...+..+ .|.+.+..+ ..+
T Consensus 103 ~~eavGAfiv~g~lilllGltG~f~rl~~~IP~~Va~amLAGIlL~f---~l~~~~a~~~--~pll~~~ml------l~~ 171 (395)
T TIGR00843 103 LNEAIAAFITAAALIFLCGITGLFAKLLKIIPHGIAAAMLAGILFQF---GLGAFAALDG--LFLICFSML------LCW 171 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH---HHHHHHHHHH--hHHHHHHHH------HHH
Confidence 36899999999999999999999999999999999999998775544 3332222111 233332222 234
Q ss_pred HhhcchhhhhhHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhhccccccccccccccccCcccccCcc
Q 021712 81 VFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAWVRIPYP 160 (308)
Q Consensus 81 ~~~k~~~~~~~iLigivvg~~~a~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~~~~f~~P~~ 160 (308)
...||+.+++++++++++|.++++.. |..+. + .+. .+ +..|
T Consensus 172 l~~~r~~Pr~avl~aLlvG~iva~~~---G~~~~-------------------------------~-~~~-~~-l~~p-- 212 (395)
T TIGR00843 172 LASKAFAPRYAMIAALICGIAFSFAL---GDMNP-------------------------------T-DLD-FK-IALP-- 212 (395)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHh---cCCCc-------------------------------c-ccc-cc-cccc--
Confidence 45678888999999999999999887 54321 1 111 00 3334
Q ss_pred cccCCCcchHHHHHHH-HHHHHHHHHHhhhhHHHHHhHhCCCCCCcccccccchhhchHHHHHhhhCCCCCCCccccchh
Q 021712 161 LQWGIPIFHLRTSLIM-IIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTLTENVH 239 (308)
Q Consensus 161 ~~fg~P~f~~~~il~~-~~~~lv~~~es~g~~~av~~~~~~~~~~~~~i~r~l~adGl~tilagl~Gtg~~~t~~senvg 239 (308)
.|..|+||+...+.. +|.+++++..+..+-.++.|.+|+++| .|+.+.++|++|++++.||+ + .++.+.-.+
T Consensus 213 -~~~~P~fs~~a~~~l~lPl~~vtm~~qnlpgiavl~aaGy~~p----~~~~~~~tGl~sll~ApfGg-~-~~nlaaita 285 (395)
T TIGR00843 213 -QFIAPDFSFAHSLNLALPLFLVSLAGQFAPGIAALKAAGYNAP----AKPIIAAAGLAALFAAFAGG-I-SIGIAAITA 285 (395)
T ss_pred -eeeCCCCCHHHHHHHHHHHHHHHHHhcCchHHHHHHHcCCCCC----chHHHHHHHHHHHHHhccCC-c-hhhhhHHhH
Confidence 566789999888876 799999999888888999999886543 59999999999999999995 6 455556666
Q ss_pred hhhccc----cc-chHHH-HHHHHHHHHHHhh-hhhhhhhhcccccCCc---hhhhhhhHHHHHHHHHHhhhhhc
Q 021712 240 TISITK----VA-SRRAV-QLGAVFMIVFSFE-KSVPFWPLYHRHWLPP---YCASCGPLLWQLVSQICSILNQQ 304 (308)
Q Consensus 240 ~i~~t~----~~-sr~~~-~~ag~~li~lgl~-p~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 304 (308)
.++.+. +. .||.. ..+|++++++|++ +.+..+... +|+ ....+.+|+-.+.+..-+-+.+.
T Consensus 286 Aic~G~~ah~d~~rR~~a~i~~Gv~yll~glfag~i~~l~~~----~P~~li~~laGlAll~~~~~~l~~a~~~~ 356 (395)
T TIGR00843 286 AICMGKDAHEDKDKRWIAAAAAGIFYLLAGLFAGAITALFAA----LPKELIAALAGLALLGAIAGNIKIALHED 356 (395)
T ss_pred HHhcCcccccCcCccchHHHHHHHHHHHHHHHHHHHHHHHHH----CCHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 666652 23 34443 4899999999999 666655543 455 44556677777766666666443
No 11
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=99.77 E-value=1.6e-17 Score=158.51 Aligned_cols=243 Identities=20% Similarity=0.267 Sum_probs=179.4
Q ss_pred ChhHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHHHHhhhhhhhccCCCCcccchHHHHHHHHHHHHHHHHHH
Q 021712 1 MRELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGSCVEISIPQILLVLIFALYLRGIS 80 (308)
Q Consensus 1 ~~~~~GavlvaGll~illg~tg~~~~l~~~~Pp~V~g~~l~lIGl~l~~~~~~~~gs~~~i~~~~~~lv~~v~l~~~~~~ 80 (308)
++|+.|+++++|++.+++|.+|+++|++|.+|+.+...|++.+ +.+++++.+.+..+ .|.+....+. .+
T Consensus 87 ~~eavGAfl~~~~Li~l~G~tg~~~rl~~~IP~~ia~AMLAGv---Ll~f~l~~f~a~~~--~P~l~~~ml~------~~ 155 (378)
T PF03594_consen 87 FAEAVGAFLVAGALILLLGVTGLFGRLMRRIPPPIASAMLAGV---LLPFGLAAFTALQA--DPLLVGPMLA------VF 155 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH---HHHHHHHHHHHHHh--HHHHHHHHHH------HH
Confidence 4799999999999999999999999999999999999898855 55555544332221 3433333222 23
Q ss_pred HhhcchhhhhhHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhhccccccccccccccccCcccccCcc
Q 021712 81 VFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAWVRIPYP 160 (308)
Q Consensus 81 ~~~k~~~~~~~iLigivvg~~~a~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~~~~f~~P~~ 160 (308)
...||+.+|++++.++++|.+++... |..+. . .+ .-++..|
T Consensus 156 l~~~r~~pr~av~~al~~g~~~a~~~---g~~~~-------------------------------~-~~--~~~~~~p-- 196 (378)
T PF03594_consen 156 LLARRFSPRYAVLAALVAGVAVAALT---GQLHP-------------------------------S-AL--QLSLAHP-- 196 (378)
T ss_pred HHHHHHcchhHHHHHHHHHHHHHHhc---CCCCc-------------------------------c-cc--cccccee--
Confidence 34578888999999999999998766 44321 1 11 1134445
Q ss_pred cccCCCcchHHHHHHH-HHHHHHHHHHhhhhHHHHHhHhCCCCCCcccccccchhhchHHHHHhhhCCCCCCCccccchh
Q 021712 161 LQWGIPIFHLRTSLIM-IIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTLTENVH 239 (308)
Q Consensus 161 ~~fg~P~f~~~~il~~-~~~~lv~~~es~g~~~av~~~~~~~~~~~~~i~r~l~adGl~tilagl~Gtg~~~t~~senvg 239 (308)
.|..|+||++.++.+ +|++++++..+...-.++-|..|+++| .|+-+...|+++++.+.||+ . .++.+.-.+
T Consensus 197 -~~~~P~Fs~~a~v~lalPL~ivtmasQnlpG~aVL~a~GY~~p----~~~~~~~tGl~s~l~ApfGg-~-~~nlAaita 269 (378)
T PF03594_consen 197 -VFTTPEFSWSALVSLALPLFIVTMASQNLPGIAVLRAAGYQPP----VNPLITVTGLASLLAAPFGG-H-AVNLAAITA 269 (378)
T ss_pred -EEECCcccHHHHHHHHHHHHHHHHHhcchHHHHHHHHcCCCCC----chHHHHHHHHHHHHHhhhch-h-hhHHHHHHH
Confidence 577899999999998 899999999999999999999885433 68999999999999999995 7 566677777
Q ss_pred hhhccc-----ccchHHHH-HHHHHHHHHHhhhhh-hhhhhcccccCCc---hhhhhhhHHHHHHHHHHhhhhhc
Q 021712 240 TISITK-----VASRRAVQ-LGAVFMIVFSFEKSV-PFWPLYHRHWLPP---YCASCGPLLWQLVSQICSILNQQ 304 (308)
Q Consensus 240 ~i~~t~-----~~sr~~~~-~ag~~li~lgl~p~~-~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 304 (308)
.+++++ ..+||... .+|++++++|++... ..+... +|+ ....+.+|+-.+.+...+-+.+.
T Consensus 270 AIc~g~eah~dp~rRy~Aav~~Gv~yll~Gl~a~~~v~l~~~----lP~~li~~lAGLALlg~l~~sl~~A~~~~ 340 (378)
T PF03594_consen 270 AICAGPEAHPDPSRRYIAAVAAGVFYLLFGLFAAALVALFAA----LPPALIAALAGLALLGTLGGSLQTAFSDE 340 (378)
T ss_pred HHHcCCccCCCcccchHHHHHHhHHHHHHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 788774 34566554 899999999988763 333332 455 45567777777777776666543
No 12
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.59 E-value=3.1e-14 Score=133.89 Aligned_cols=238 Identities=20% Similarity=0.255 Sum_probs=169.9
Q ss_pred ChhHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHHHHhhhhhhhccCCCCcccchHHHHHHHHHHHHHHHHHH
Q 021712 1 MRELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGSCVEISIPQILLVLIFALYLRGIS 80 (308)
Q Consensus 1 ~~~~~GavlvaGll~illg~tg~~~~l~~~~Pp~V~g~~l~lIGl~l~~~~~~~~gs~~~i~~~~~~lv~~v~l~~~~~~ 80 (308)
+.|+.|+++++|++.++.|.+|.++|+++.+|+.+...++..| +.+++++....... .|.+.+...++ +
T Consensus 102 ~~eaVGAfiVt~~li~l~G~~~~l~rl~~~IP~sla~AmlAGI---LL~F~l~a~~a~~~--~p~l~lpmv~~------~ 170 (402)
T COG3135 102 FAEAVGAFIVTGALIILCGLTGPLTRLMRIIPPSLAAAMLAGI---LLRFGLKAFKALPT--QPLLVLPMVLA------Y 170 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCChHHHHHHHHHH---HHHHHHHHHhccCC--ChHHHHHHHHH------H
Confidence 4689999999999999999999999999999998888888754 56666654432211 23333322221 2
Q ss_pred HhhcchhhhhhHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhhccccccccccccccccCcccccCcc
Q 021712 81 VFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAWVRIPYP 160 (308)
Q Consensus 81 ~~~k~~~~~~~iLigivvg~~~a~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~~~~f~~P~~ 160 (308)
...|.+-.+++++..+++|...+... |..+.. ...+..+.|
T Consensus 171 ll~r~f~pr~aV~aalvvgv~va~~~---G~~~~~----------------------------------~~~~~~~~p-- 211 (402)
T COG3135 171 LLARVFAPRYAVIAALVVGVLVAALL---GDLHTA----------------------------------LVALEISTP-- 211 (402)
T ss_pred HHHHHcCchHHHHHHHHHHHHHHHHh---Cccccc----------------------------------ccccccCcc--
Confidence 23466667889999999999999988 544210 112224456
Q ss_pred cccCCCcchHHHHHHH-HHHHHHHHHHhhhhHHHHHhHhCCCCCCcccccccchhhchHHHHHhhhCCCCCCCccccchh
Q 021712 161 LQWGIPIFHLRTSLIM-IIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTLTENVH 239 (308)
Q Consensus 161 ~~fg~P~f~~~~il~~-~~~~lv~~~es~g~~~av~~~~~~~~~~~~~i~r~l~adGl~tilagl~Gtg~~~t~~senvg 239 (308)
.|-.|+||+.+++.+ +|.+++++..+...-+|+-|.+|++++ .+.-+...|+.+.+++.||+ . +++...-.+
T Consensus 212 -~~v~P~Fs~~A~l~lalPL~lvtmasQN~pGiAvLka~gY~pp----~~pl~~~TGl~sll~ApfG~-~-t~nLaAItA 284 (402)
T COG3135 212 -TWVTPEFSFAAMLSLALPLFLVTMASQNLPGIAVLKAAGYQPP----PSPLIVATGLASLLSAPFGG-H-TVNLAAITA 284 (402)
T ss_pred -eeeCCcccHHHHHHHhHHHHHHHHHhccCccceeehhcCCCCC----CchHHHHhHHHHHHhccccc-c-eecHHHHHH
Confidence 678899999999998 799999999999999999999886433 47789999999999999995 6 667777777
Q ss_pred hhhccc-----ccchHHH-HHHHHHHHHHHhhhh-hhhhhhcccccCCc-hhhhhhhHHHHHHHHH
Q 021712 240 TISITK-----VASRRAV-QLGAVFMIVFSFEKS-VPFWPLYHRHWLPP-YCASCGPLLWQLVSQI 297 (308)
Q Consensus 240 ~i~~t~-----~~sr~~~-~~ag~~li~lgl~p~-~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 297 (308)
.|+++. ...||.. .++|++.+++|+|.. +.++....+. +. ....+.+|+-..-+..
T Consensus 285 Aic~gpdaHpD~~rry~Aa~~agi~ylv~GlF~~~~~~l~~alP~--~li~~lAGLALlg~~~~~l 348 (402)
T COG3135 285 AICTGPDAHPDPARRYTAALVAGIFYLLAGLFGGALVGLMAALPA--SLIAALAGLALLGTLGNSL 348 (402)
T ss_pred HHhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcH--HHHHHHHHHHHHHHHHHHH
Confidence 777774 3456555 499999999998864 3334333111 12 2334555555544433
No 13
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=99.59 E-value=1.9e-13 Score=138.38 Aligned_cols=235 Identities=15% Similarity=0.192 Sum_probs=148.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHHHHhhhhhhhc------cCCCC-cc-----------cchH
Q 021712 2 RELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGF------PQAGS-CV-----------EISI 63 (308)
Q Consensus 2 ~~~~GavlvaGll~illg~tg~~~~l~~~~Pp~V~g~~l~lIGl~l~~~~~------~~~gs-~~-----------~i~~ 63 (308)
+.+.-+.+++|++|+++|++|+ +++.+++|+.|+-.++..||+.++.-.+ +..++ .+ ....
T Consensus 98 ~~~~~~tllaGv~~i~~G~lRL-G~li~fip~pVl~Gf~~Giai~I~~~Ql~~~~G~~~~~~~~~~~~~~l~~~~~~~~~ 176 (554)
T COG0659 98 ALAFLATLLAGVFQILLGLLRL-GRLIRFIPRPVLIGFTAGIAILIILTQLPVLLGLASKVSGFWAKVSALFTVLLTINL 176 (554)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-hhhhhhccHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchHHHHHHHHHhcccccH
Confidence 4567788999999999999995 9999999988888899999997774322 22111 00 0111
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhhhhh-HHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhhccccccc
Q 021712 64 PQILLVLIFALYLRGISVFGHHLFRIYA-VPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCR 142 (308)
Q Consensus 64 ~~~~lv~~v~l~~~~~~~~~k~~~~~~~-iLigivvg~~~a~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (308)
.. .++..+++.+ +. ..+|+.+++| .++++++++.+++.+. ......+ +
T Consensus 177 ~~-~~lg~~~l~i--l~-~~~~~~~~~P~~liaiv~~t~i~~~~~---~~~~~~G--~---------------------- 225 (554)
T COG0659 177 AT-LLLGLLTLAI--LL-FLPRLTPRIPSPLIALVLGTLIVWIFP---LDSLRYG--E---------------------- 225 (554)
T ss_pred HH-HHHHHHHHHH--HH-HccchhhhCCcHHHHHHHHHHHHHHhc---CCchhcc--c----------------------
Confidence 11 2222333321 11 2244445555 7999999999999883 2110000 0
Q ss_pred cccccccccCcccccCcccccCCCcchH----HHHHHHHHHHHHHHHHhhhhHHHHHhHhCCCCCCcccccccchhhchH
Q 021712 143 TDVSNAWRTAAWVRIPYPLQWGIPIFHL----RTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFC 218 (308)
Q Consensus 143 ~d~~~~v~~~~~f~~P~~~~fg~P~f~~----~~il~~~~~~lv~~~es~g~~~av~~~~~~~~~~~~~i~r~l~adGl~ 218 (308)
+..+.....+++ +.|.+++ ..+...+.++++...|+..+..+.++.+|+ +++.||++.++|++
T Consensus 226 -i~~~lp~~~~~~--------~~P~~~~~~~~~l~~~al~la~lg~iesllta~~~~~~~~~----~~d~nrELiaqGia 292 (554)
T COG0659 226 -IPGSLPSGLPHF--------RLPNVSLSLLLALLPYALALALLGLLESLLTAVSFDGMTGT----KHDSNRELIAQGIA 292 (554)
T ss_pred -CcccCCcCCCcc--------cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CCCCCHHHHHhhHH
Confidence 011011223334 4444444 344445678999999999999999998763 45579999999999
Q ss_pred HHHHhhhCCCCCCCc-cccchhhhhcccccchHHHHHHHHHHHHH--HhhhhhhhhhhcccccCCchhhhhhhHHHH
Q 021712 219 SILAGLWGSGTGSST-LTENVHTISITKVASRRAVQLGAVFMIVF--SFEKSVPFWPLYHRHWLPPYCASCGPLLWQ 292 (308)
Q Consensus 219 tilagl~Gtg~~~t~-~senvg~i~~t~~~sr~~~~~ag~~li~l--gl~p~~~a~~~~~~~~~~~~~~~~~~~~~~ 292 (308)
|+.+|+||+ .|.+. ++.++.-+. +|.++|-+..+++++++++ .+-|.+..+ |.|+.+.-++..
T Consensus 293 Ni~sglfgg-~p~~g~~srS~~nv~-sGarT~lsgi~~a~~lll~l~~~~~~~~~I---------P~a~Laavli~v 358 (554)
T COG0659 293 NIASGLFGG-IPATGSISRSAINIK-SGARTRLSGIIHAALLLLLLLFLAPLVSYI---------PLAALAAVLILV 358 (554)
T ss_pred HHHHHHhCC-ccccchhHHHHHHHH-hCCcChHHHHHHHHHHHHHHHHHHHHHHhC---------cHHHHHHHHHHH
Confidence 999999996 66665 555555555 5666677777665554433 444445555 666666655433
No 14
>PRK11660 putative transporter; Provisional
Probab=99.45 E-value=1.1e-11 Score=126.44 Aligned_cols=258 Identities=13% Similarity=0.116 Sum_probs=142.7
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHHHHhhhhhhh------ccCC--C-Cc-----------ccchH
Q 021712 4 LQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYG------FPQA--G-SC-----------VEISI 63 (308)
Q Consensus 4 ~~GavlvaGll~illg~tg~~~~l~~~~Pp~V~g~~l~lIGl~l~~~~------~~~~--g-s~-----------~~i~~ 63 (308)
+..+.+++|++|+++|++|+ +++.+++|..|+..++..+|+.++... ++.. + +. .+...
T Consensus 105 ~~~~~~l~Gii~~l~gllrl-G~l~~fip~pVi~Gf~~g~al~I~~~Ql~~~lG~~~~~~~~~~~~~l~~~~~~l~~~~~ 183 (568)
T PRK11660 105 LLVATLMSGIILILMGLARL-GRLIEYIPLSVTLGFTSGIGIVIATLQIKDFFGLQMAHVPEHYLEKVGALFQALPTINW 183 (568)
T ss_pred HHHHHHHHHHHHHHHHHHhh-hHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHHhhccCCH
Confidence 44568899999999999995 899999999999999999998665332 2211 1 00 01112
Q ss_pred HHHHHHHHHHHH-HHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhhccccccc
Q 021712 64 PQILLVLIFALY-LRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCR 142 (308)
Q Consensus 64 ~~~~lv~~v~l~-~~~~~~~~k~~~~~~~iLigivvg~~~a~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (308)
+.. ++.++++. +..+.++.+ |....++++++++++++.+.. .+.+. +......+.. .+.. ...
T Consensus 184 ~~~-~~~~~~l~lll~~~~~~~---~iP~~li~iiv~t~~~~~~~~---~~~~v--~~vg~~~~~~-----~~~g--~~~ 247 (568)
T PRK11660 184 GDA-LIGIVTLGVLILWPRLKI---RLPGHLPALLAGTAVMGVLNL---LGGHV--ATIGSRFHYV-----LADG--SQG 247 (568)
T ss_pred HHH-HHHHHHHHHHHHHHhhcc---cCchHHHHHHHHHHHHHHHhc---cCCCc--eeeccccccc-----cccc--ccc
Confidence 222 22222222 122222222 223468888999998887732 11100 0000000000 0000 000
Q ss_pred cccccccccCcccccCcc-ccc-CCC-cchHHH----HHHHHHHHHHHHHHhhhhHHHHHhHhCCCCCCcccccccchhh
Q 021712 143 TDVSNAWRTAAWVRIPYP-LQW-GIP-IFHLRT----SLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGME 215 (308)
Q Consensus 143 ~d~~~~v~~~~~f~~P~~-~~f-g~P-~f~~~~----il~~~~~~lv~~~es~g~~~av~~~~~~~~~~~~~i~r~l~ad 215 (308)
..++ ...|-+.+|.. ..+ +.+ .+|+.. +...+.++++..+|++-.....++..++ +.+.||++.++
T Consensus 248 ~~ip---~~~p~~~~p~~~~~~~~~~~~~~~~~~~~ll~~a~~iaiv~~iesl~~~~~~~~~~~~----~~d~n~EL~a~ 320 (568)
T PRK11660 248 NGIP---PLLPQFVLPWNLPGADGQPFTLSWDLIRALLPAAFSMAMLGAIESLLCAVVLDGMTGT----KHSANSELVGQ 320 (568)
T ss_pred cCCC---CCCCCCCCCccccccccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CCCCcHHHHHH
Confidence 0011 01111222310 000 000 235443 3445677888889998777777776542 33579999999
Q ss_pred chHHHHHhhhCCCCCCCcc-ccchhhhhcccccchHHHHHH-HHHHHHH-HhhhhhhhhhhcccccCCchhhhhhhHHHH
Q 021712 216 GFCSILAGLWGSGTGSSTL-TENVHTISITKVASRRAVQLG-AVFMIVF-SFEKSVPFWPLYHRHWLPPYCASCGPLLWQ 292 (308)
Q Consensus 216 Gl~tilagl~Gtg~~~t~~-senvg~i~~t~~~sr~~~~~a-g~~li~l-gl~p~~~a~~~~~~~~~~~~~~~~~~~~~~ 292 (308)
|++|+++|++|+ .|.+.+ +++..... +|.++|.+..+. .++++.+ .+.|.+..+ |.|+.++-+++.
T Consensus 321 G~aNi~~~~fgg-~p~~~s~srSa~n~~-aGarT~la~iv~a~~~ll~ll~l~~ll~~i---------P~~vLa~ili~~ 389 (568)
T PRK11660 321 GLGNIVAPFFGG-ITATAAIARSAANVR-AGATSPISAVIHALLVLLALLVLAPLLSYL---------PLSAMAALLLMV 389 (568)
T ss_pred hHHHHHHHHhCc-ccccchHHHHHHHHh-cCCCcHHHHHHHHHHHHHHHHHHHHHHHhC---------cHHHHHHHHHHH
Confidence 999999999996 888877 66655544 555556665544 4444443 666666655 778888877665
Q ss_pred HHHH
Q 021712 293 LVSQ 296 (308)
Q Consensus 293 ~~~~ 296 (308)
....
T Consensus 390 ~~~m 393 (568)
T PRK11660 390 AWNM 393 (568)
T ss_pred HHHh
Confidence 5543
No 15
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=99.44 E-value=1.9e-11 Score=124.48 Aligned_cols=239 Identities=11% Similarity=0.124 Sum_probs=145.2
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHHHHhhhhh------hhccCC--CC-c-----------ccc--
Q 021712 4 LQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFS------YGFPQA--GS-C-----------VEI-- 61 (308)
Q Consensus 4 ~~GavlvaGll~illg~tg~~~~l~~~~Pp~V~g~~l~lIGl~l~~------~~~~~~--gs-~-----------~~i-- 61 (308)
+....+++|++|+++|++|+ +++.+++|..|+..++..+|+.++. .|++.. ++ . .+.
T Consensus 99 a~~l~~l~Gi~~~~~g~lrl-G~l~~~is~~Vi~Gf~~g~a~~i~~~Ql~~~~G~~~~~~~~~~~~~~~~~~~~l~~~~~ 177 (563)
T TIGR00815 99 AFTLTLLAGIFQVILGLLRL-GFLIEFLSHAVISGFMTGAAITIGLSQLKGLLGISIFNTRTDTLGVVISTWAGLPNTHN 177 (563)
T ss_pred HHHHHHHHHHHHHHHHHHhh-hHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhccc
Confidence 44678899999999999995 9999999999999999999997762 233321 11 0 011
Q ss_pred -hHHHHHHHHHHHHHHHHHHHhhcchhh----h-hhHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhh
Q 021712 62 -SIPQILLVLIFALYLRGISVFGHHLFR----I-YAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHA 135 (308)
Q Consensus 62 -~~~~~~lv~~v~l~~~~~~~~~k~~~~----~-~~iLigivvg~~~a~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (308)
..+...+.+.....+....++.|++.+ . ...++.+++++++...+. ..++
T Consensus 178 ~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~p~~li~vi~~~~~~~~~~---~~~~--------------------- 233 (563)
T TIGR00815 178 WNWCTLVIGLVLLLFLLYTKKLGKRNKKLLFAPAVAPLLVVILATLAVTIGL---HKKQ--------------------- 233 (563)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhhccchhcccccHHHHHHHHHHHHHHHHc---cCCC---------------------
Confidence 222222211111112222333333211 1 236778888887766552 1100
Q ss_pred ccccccccccccccccCcccccCcccccCCCcchHHH----HHHHHHHHHHHHHHhhhhHHHHHhHhCCCCCCccccccc
Q 021712 136 YTMKHCRTDVSNAWRTAAWVRIPYPLQWGIPIFHLRT----SLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRG 211 (308)
Q Consensus 136 ~~~~~~~~d~~~~v~~~~~f~~P~~~~fg~P~f~~~~----il~~~~~~lv~~~es~g~~~av~~~~~~~~~~~~~i~r~ 211 (308)
+.. .+.+-|- .+| .+..|.+|+.. +...+.++++..+|++....+.++..++ +.+.||+
T Consensus 234 --------~~~-~~g~ip~-g~p---~~~~~~~~~~~~~~l~~~a~~ia~v~~~e~l~~a~~~~~~~~~----~~d~n~E 296 (563)
T TIGR00815 234 --------GVS-ILGHIPS-GLS---FFPPITLDWELLPTLAPDAIAIAIVGLIESIAIARSFARMTGY----KIDANQE 296 (563)
T ss_pred --------CeE-EEeecCC-CCC---CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----CCCCcHH
Confidence 000 1111110 123 23445666543 3344678999999999998888887652 3346999
Q ss_pred chhhchHHHHHhhhCCCCCCCccccchhhhhcccccchHHHHHHHHHHHHH--HhhhhhhhhhhcccccCCchhhhhhhH
Q 021712 212 IGMEGFCSILAGLWGSGTGSSTLTENVHTISITKVASRRAVQLGAVFMIVF--SFEKSVPFWPLYHRHWLPPYCASCGPL 289 (308)
Q Consensus 212 l~adGl~tilagl~Gtg~~~t~~senvg~i~~t~~~sr~~~~~ag~~li~l--gl~p~~~a~~~~~~~~~~~~~~~~~~~ 289 (308)
+.++|++|+++|+||+ .|.+.+.....+-..+|.++|.+..+++++++++ .+.|.+..+ |.|+.++-+
T Consensus 297 l~a~G~~N~~~~~fg~-~p~~~s~srs~~~~~~G~~t~~a~i~~~~~~l~~~l~~~~~l~~i---------P~~~la~il 366 (563)
T TIGR00815 297 LVAQGIANIVGSFFSC-YPATGSLSRTAVNAKAGCRTQLSGVVTAIVVLLVLLVLTPLFYYI---------PQAALAAII 366 (563)
T ss_pred HHHhhHHHHHHHHhCc-cCCCCcchHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHhC---------hHHHHHHHH
Confidence 9999999999999996 8777544445555567777888888777665444 333433333 677777777
Q ss_pred HHHHH
Q 021712 290 LWQLV 294 (308)
Q Consensus 290 ~~~~~ 294 (308)
+....
T Consensus 367 i~~~~ 371 (563)
T TIGR00815 367 ISAVR 371 (563)
T ss_pred HHHHh
Confidence 55444
No 16
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.14 E-value=1.3e-10 Score=107.73 Aligned_cols=227 Identities=15% Similarity=0.178 Sum_probs=130.7
Q ss_pred HhhhHHHHHHhhcCcccHHHHHHHHHhhhhhh------hccC---CCC---c----c----cc-hHHH--HHHHHHHHHH
Q 021712 19 GFTGLMSLFLRLINPVVVAPTVAAIGLAFFSY------GFPQ---AGS---C----V----EI-SIPQ--ILLVLIFALY 75 (308)
Q Consensus 19 g~tg~~~~l~~~~Pp~V~g~~l~lIGl~l~~~------~~~~---~gs---~----~----~i-~~~~--~~lv~~v~l~ 75 (308)
|+.| .+++.+++|..|+..++..+|+.++.- +++. ... . . +. ..+. ..+..++.+.
T Consensus 2 Gllr-lG~l~~~ip~pVi~Gf~~g~ai~I~~~Ql~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 80 (280)
T PF00916_consen 2 GLLR-LGFLVRFIPRPVISGFLAGIAILIIFSQLPNLLGIPVVPSHEGLFSFIRALFQLISTITNWPTLAIGLVALVFLL 80 (280)
T ss_pred cccc-ccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchhhhhhhhhhhccchhhhhhhhHHHHHHh
Confidence 6677 499999999999999999999977632 3331 000 0 0 00 1111 1111111111
Q ss_pred -HHHHH-Hhhcchhhhhh-HHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhhccccccccccccccccC
Q 021712 76 -LRGIS-VFGHHLFRIYA-VPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTA 152 (308)
Q Consensus 76 -~~~~~-~~~k~~~~~~~-iLigivvg~~~a~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~~ 152 (308)
...+. ++.+++.+..| .++.++++..++..+.. ...+. + +..+.....
T Consensus 81 ~~~~~~~~~~~~~~~~~p~~li~vv~~~~~~~~~~~-~~~~v----~------------------------~~~~i~~~l 131 (280)
T PF00916_consen 81 IIRLLPKRLPSRFWPPIPAPLIVVVLGTLLSWLFLL-DKYGV----A------------------------IVGEIPSGL 131 (280)
T ss_pred hhhhhhhhccccccccccccceeeehhhhhhhhhhh-ccccc----c------------------------ccccccccC
Confidence 11111 11234444444 67788888887766521 00000 0 011011123
Q ss_pred cccccCcccccCCCcchH----HHHHHHHHHHHHHHHHhhhhHHHHHhHhCCCCCCcccccccchhhchHHHHHhhhCCC
Q 021712 153 AWVRIPYPLQWGIPIFHL----RTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSG 228 (308)
Q Consensus 153 ~~f~~P~~~~fg~P~f~~----~~il~~~~~~lv~~~es~g~~~av~~~~~~~~~~~~~i~r~l~adGl~tilagl~Gtg 228 (308)
|.+.+|. . .+|+ ..+...+.++++..+|++.+..+.++..+ ++.+.||++.+.|++|+++|++|+
T Consensus 132 p~~~~p~-~-----~~~~~~~~~~~~~a~~ia~v~~~~s~~~~~~~~~~~~----~~~d~n~El~a~G~aNi~s~~~gg- 200 (280)
T PF00916_consen 132 PPPSLPS-F-----DISWSLILDLLPTALAIAIVGFIESLLIAKSIAKKTG----YRIDPNQELIALGLANIVSGLFGG- 200 (280)
T ss_pred ccccCcc-c-----ccccccccccchhHHHHHHHHHHHHHHhhhhhccccc----ccCCcHHHHHHhhhccccchhhcc-
Confidence 3344442 1 2332 23445577889999999988888777654 233579999999999999999996
Q ss_pred CCCCccccchhhhhcccccchHHHHHHHHHHHH--HHhhhhhhhhhhcccccCCchhhhhhhHHHHHHH
Q 021712 229 TGSSTLTENVHTISITKVASRRAVQLGAVFMIV--FSFEKSVPFWPLYHRHWLPPYCASCGPLLWQLVS 295 (308)
Q Consensus 229 ~~~t~~senvg~i~~t~~~sr~~~~~ag~~li~--lgl~p~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (308)
.|.+..-....+-...|.++|.+..++++++++ +.+.|.+..+ |.|+.++-+++....
T Consensus 201 ~p~~~s~srs~~~~~~Ga~t~~s~~~~~~~~l~~l~~~~~~l~~i---------P~~~La~ili~~~~~ 260 (280)
T PF00916_consen 201 MPGSGSFSRSAVNYRAGARTRLSGLISALFVLLVLLFLAPLLAYI---------PKAVLAAILIVVGIS 260 (280)
T ss_pred cccccccccchHHHhcCcceeehhHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHh
Confidence 777765444444555677778887766665543 3444555544 778888877666554
No 17
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism]
Probab=98.47 E-value=9e-06 Score=84.59 Aligned_cols=227 Identities=14% Similarity=0.167 Sum_probs=131.9
Q ss_pred hHHHHHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHHHHhhhhh------hhccCCC---Cc-----------ccch
Q 021712 3 ELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFS------YGFPQAG---SC-----------VEIS 62 (308)
Q Consensus 3 ~~~GavlvaGll~illg~tg~~~~l~~~~Pp~V~g~~l~lIGl~l~~------~~~~~~g---s~-----------~~i~ 62 (308)
.+....+++|++|.++|++++ +++.+++|..++.+++...++.+.- .|++... +. .+..
T Consensus 167 va~~lt~l~Giiq~~mG~lrL-Gfl~~~lS~~~l~GFt~gaa~~I~~sQlk~llGi~~~~~~~~~~~~~~~~~~~~~~~~ 245 (665)
T KOG0236|consen 167 VATTLTFLTGIIQLILGLLRL-GFLVRFLSEPALSGFTTGAALHIVTSQLKVLLGITSFPRHSGPGSIVFIVFDLLANLP 245 (665)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-ChHHHHccHHHHhHhhhhhhhhhhHHhhHhhccccccCCCCCceeEEEeeHHhhhccc
Confidence 355677899999999999995 9999999988877788887775552 2333111 00 0000
Q ss_pred ----HHHHHHHHHHHHH-HH-HHHHhhcchh--hhhhHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhh
Q 021712 63 ----IPQILLVLIFALY-LR-GISVFGHHLF--RIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKH 134 (308)
Q Consensus 63 ----~~~~~lv~~v~l~-~~-~~~~~~k~~~--~~~~iLigivvg~~~a~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 134 (308)
...+.++.++.++ .+ ...++.|++. ....-++.++++++++..+...+.. . +
T Consensus 246 ~~~~~~~~~l~~l~~L~~~k~~~~~~~~k~~~v~~~~~li~vIi~T~~~~~~~~~~~~--~------~------------ 305 (665)
T KOG0236|consen 246 KTLATLVLSLIFLVVLLLTKELNPKFKKKLFSVPIPFELIVVIIGTLISYIFRLEGRY--G------P------------ 305 (665)
T ss_pred ccchhhhhHHHHHHHHHHHHHhhhhhcccceeecccHHHHHHHHHHHHHHHhcccccc--C------C------------
Confidence 1122222222222 12 1111222221 1112688999999998887431110 0 0
Q ss_pred hccccccccccccccccCcccccCcccccCCCcch--HHHHHHHHHHHHHHHHHhhhhHHHHHhHhCCCCCCcccccccc
Q 021712 135 AYTMKHCRTDVSNAWRTAAWVRIPYPLQWGIPIFH--LRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGI 212 (308)
Q Consensus 135 ~~~~~~~~~d~~~~v~~~~~f~~P~~~~fg~P~f~--~~~il~~~~~~lv~~~es~g~~~av~~~~~~~~~~~~~i~r~l 212 (308)
...+ .-.+++..| ..|.++ ...+...+.+++++..|++.--.+.++..++ .-+-|+++
T Consensus 306 ---------~~~~--~i~~g~~~~-----~lp~~~~~~~~~~~~~~i~iva~~~~iai~k~fa~~~~y----~vd~nqEL 365 (665)
T KOG0236|consen 306 ---------IIVG--EIPRGFPPP-----SLPPLSLTPQVIPDAFAIAIVALLEHIAIGKSFASLHGY----KVDSNQEL 365 (665)
T ss_pred ---------eeec--cCCCCCCCC-----CCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----eeCCChHH
Confidence 0000 111222222 333333 2445667888999999998776677766542 22358999
Q ss_pred hhhchHHHHHhhhCCCCCCCccccchhhhhcccccchHHHH-HHHHHHH-HHHhhhhhhhh
Q 021712 213 GMEGFCSILAGLWGSGTGSSTLTENVHTISITKVASRRAVQ-LGAVFMI-VFSFEKSVPFW 271 (308)
Q Consensus 213 ~adGl~tilagl~Gtg~~~t~~senvg~i~~t~~~sr~~~~-~ag~~li-~lgl~p~~~a~ 271 (308)
.|-|++|+++++|+. .|+|..-.+..+=..+|+.++-... .+.+.++ +..+-|-+..+
T Consensus 366 iAlG~~Ni~sSff~~-~p~tgs~sRSav~~~sG~~T~~s~i~~~~~vl~~l~~l~p~f~~i 425 (665)
T KOG0236|consen 366 IALGISNILSSFFGC-YPTTGSFSRSAVNIKSGGRTQVAGIVSAALVLLALLFLGPLFYYI 425 (665)
T ss_pred HHHHHHHHhhhhhce-EcccchhhHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999997 7777655555555566666666654 4444443 34555555555
No 18
>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 489 to 517 amino acids in length.
Probab=95.54 E-value=0.63 Score=45.30 Aligned_cols=219 Identities=17% Similarity=0.235 Sum_probs=109.7
Q ss_pred HHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHHHHhhhhhhhccC----CCCcccc-hHHHHHHHHHHHHHHHHHHHhhc
Q 021712 10 VGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQ----AGSCVEI-SIPQILLVLIFALYLRGISVFGH 84 (308)
Q Consensus 10 vaGll~illg~tg~~~~l~~~~Pp~V~g~~l~lIGl~l~~~~~~~----~gs~~~i-~~~~~~lv~~v~l~~~~~~~~~k 84 (308)
.-|++-++++.+|--+|+.+.-...|.|..+.-.|+.-....++. +++. +. ....+.+.+.+.+|. .+.++.|
T Consensus 150 lvg~fGlil~~~kggS~L~~LTs~gv~ggLllylG~~G~~~qi~kl~~wa~~~-~~~~i~fvvi~~tiv~Ya-~L~k~~K 227 (492)
T PF11840_consen 150 LVGVFGLILSIFKGGSKLVNLTSHGVCGGLLLYLGFVGLIGQIKKLFAWANGF-DMGYIAFVVIIVTIVLYA-YLAKIEK 227 (492)
T ss_pred HHHHHHHHHHHhcchhHHHhhhcCccccceeeeehhhhHHHHHHHHHHHHhcc-CccHHHHHHHHHHHHHHH-HHHHhcc
Confidence 346666777777777788877777777765554444221111110 1110 11 122233333344443 3455667
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhhccccccccccccccccCcccccCcccccC
Q 021712 85 HLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAWVRIPYPLQWG 164 (308)
Q Consensus 85 ~~~~~~~iLigivvg~~~a~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~~~~f~~P~~~~fg 164 (308)
||+ ++.++-.++-++++.+++ .+++.+ .|..|+ . ...-|..--.=.+.+
T Consensus 228 rWL---aIPl~~~~a~~~a~~lGa--~f~f~t-~pglp~---------------------l----nP~YWWge~tGw~Lg 276 (492)
T PF11840_consen 228 RWL---AIPLCSILAGVLAFALGA--PFEFTT-EPGLPN---------------------L----NPMYWWGEETGWQLG 276 (492)
T ss_pred chh---hhhHHHHHHHHHHHHcCC--Cceeec-CCCCCC---------------------C----CCcccccCCcccccC
Confidence 764 677777777777877732 122211 011121 1 111111111112455
Q ss_pred CCcchHHHHHHHHHHHHHHH----HHhhhhHHHHHhHhCCC--CCCcccccccchhhchHHHHHhhhCCCCCCCccccch
Q 021712 165 IPIFHLRTSLIMIIVSLVAS----VDSVGTYHTASLLVNSK--PPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTLTENV 238 (308)
Q Consensus 165 ~P~f~~~~il~~~~~~lv~~----~es~g~~~av~~~~~~~--~~~~~~i~r~l~adGl~tilagl~Gtg~~~t~~senv 238 (308)
+|.+ ...+..+++++.+. .|.+|+ ..-+++.-.+ ++..-+++.......+=+++++.+|+ - +.++|=-.
T Consensus 277 lP~~--~hfiav~PFAiLAVaMWSpDflgh-rvFqelnypk~~~kvlMnvDDTm~~~siRQ~vGs~lGG-g-N~~SsWgT 351 (492)
T PF11840_consen 277 LPTL--EHFIAVLPFAILAVAMWSPDFLGH-RVFQELNYPKETKKVLMNVDDTMTMCSIRQIVGSILGG-G-NIASSWGT 351 (492)
T ss_pred CCcH--HHHHHhccHHHHHHHHhCchHHHH-HHHHHhcCchhhcceeecccchhHHHHHHHHHhhcccC-C-cccccchh
Confidence 6654 33455555544433 366776 3444443211 22233678999999999999999996 3 33322111
Q ss_pred hh--hhcccccchHHHHHHHHHHHHHHhhh
Q 021712 239 HT--ISITKVASRRAVQLGAVFMIVFSFEK 266 (308)
Q Consensus 239 g~--i~~t~~~sr~~~~~ag~~li~lgl~p 266 (308)
=. .++.|+-=+--....|+++++.++..
T Consensus 352 ymIPaaIaKRPIpggAiLtg~~Ci~~av~G 381 (492)
T PF11840_consen 352 YMIPAAIAKRPIPGGAILTGLLCIVAAVWG 381 (492)
T ss_pred hhhhHHHhcCCCCchHHHHHHHHHHHHHhc
Confidence 11 12234444444556677777776654
No 19
>TIGR00834 ae anion exchange protein. They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
Probab=92.93 E-value=10 Score=41.23 Aligned_cols=114 Identities=18% Similarity=0.105 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHhHhCCCCCCcccccccchhhchHHHHHhhhCCCCCCCcc----ccchhhhh---
Q 021712 170 LRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTL----TENVHTIS--- 242 (308)
Q Consensus 170 ~~~il~~~~~~lv~~~es~g~~~av~~~~~~~~~~~~~i~r~l~adGl~tilagl~Gtg~~~t~~----senvg~i~--- 242 (308)
+.++++.+.+++.-.+|+.-+..-+++-.. +-+++...+--+..-|+-+.++|++|- +..+.- ...+..+.
T Consensus 655 ~~A~iPAlll~ILiFmD~nIts~iv~~~e~-kLkKgsgyH~Dllllg~~~~v~sllGL-Pw~~aatv~S~~Hv~sL~v~~ 732 (900)
T TIGR00834 655 FAAALPALLVFILIFMEQQITTLIVSKKER-KLKKGSGFHLDLLLVVGMGGVAALFGL-PWLSAATVRSVTHANALTVMS 732 (900)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHhcCccc-cCCCCcccchHHHHHHHHHHHHHhcCC-CcccccCCcChhhHhHHeeee
Confidence 445555566677777788766544444221 112334467778889999999999994 643321 00111111
Q ss_pred ----------ccccc-chHHHHHHHHHH-HHHHhhhhhhhhhhcccccCCchhhhhhhHHHHHH
Q 021712 243 ----------ITKVA-SRRAVQLGAVFM-IVFSFEKSVPFWPLYHRHWLPPYCASCGPLLWQLV 294 (308)
Q Consensus 243 ----------~t~~~-sr~~~~~ag~~l-i~lgl~p~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 294 (308)
..++. .|......+++. +.+.+.|.+..+ |+.+++|-.++--+
T Consensus 733 ~~~~~Ge~~~i~~V~EQRvT~ll~~lLiglsv~~~PvL~~I---------P~aVL~GvFlYMGv 787 (900)
T TIGR00834 733 KASAPGEKAQIQEVREQRVTGLLVAVLVGLSILMEPILKRI---------PLAVLFGIFLYMGV 787 (900)
T ss_pred eccCCCCCCccceeEeeehHHHHHHHHHHHHHHHHHHHhhc---------cHHHHHHHHHHHHH
Confidence 11222 344444444433 344566644444 78888888777555
No 20
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism]
Probab=80.91 E-value=89 Score=33.93 Aligned_cols=60 Identities=13% Similarity=0.082 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHhHhCCCCCCcccccccchhhchHHHHHhhhCCCCCCC
Q 021712 171 RTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSS 232 (308)
Q Consensus 171 ~~il~~~~~~lv~~~es~g~~~av~~~~~~~~~~~~~i~r~l~adGl~tilagl~Gtg~~~t 232 (308)
.++++.+.+++.-.+|+--+-.-++|... +-+++...+--+..-|+-+.++|++|- +...
T Consensus 632 ~A~ipalll~iLiFmDqqIts~iv~rke~-kLKKgsgyH~DLlllgil~~icsllGL-Pw~~ 691 (876)
T KOG1172|consen 632 AALIPALLLTILIFMDQQITAVIVNRKEN-KLKKGSGYHLDLLLLGILTLICSLLGL-PWSN 691 (876)
T ss_pred HHHHHHHHHHHHHHhcchHHHHHhhcccc-cCCCCcchhHHHHHHHHHHHHHHhcCC-Cccc
Confidence 34444455566666777655433443321 223444567778999999999999995 5443
No 21
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=62.14 E-value=36 Score=33.63 Aligned_cols=88 Identities=17% Similarity=0.150 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHhh-hHHHHHHhhcCcccHHHHHHHHHhhhhhh---hccC-CCCcccchHHHHHHHHHHHHHHHHH
Q 021712 5 QGAIIVGSIFQSILGFT-GLMSLFLRLINPVVVAPTVAAIGLAFFSY---GFPQ-AGSCVEISIPQILLVLIFALYLRGI 79 (308)
Q Consensus 5 ~GavlvaGll~illg~t-g~~~~l~~~~Pp~V~g~~l~lIGl~l~~~---~~~~-~gs~~~i~~~~~~lv~~v~l~~~~~ 79 (308)
.++-+.+|++++++|++ +....+...+|+..+... -|+.+.+. .+.. ..+..+-..+.+++++..+
T Consensus 301 ~~a~i~~Gv~yll~glfag~i~~l~~~~P~~li~~l---aGlAll~~~~~~l~~a~~~~~~r~~a~~tflvtaS------ 371 (395)
T TIGR00843 301 WIAAAAAGIFYLLAGLFAGAITALFAALPKELIAAL---AGLALLGAIAGNIKIALHEDQERDAALIAFLATAS------ 371 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH---HHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHh------
Confidence 46778999999999998 788889999998877633 35555432 1111 1222221223333433332
Q ss_pred HHhhcchhhhhhHHHHHHHHHHHHH
Q 021712 80 SVFGHHLFRIYAVPLSVMIIWAYAF 104 (308)
Q Consensus 80 ~~~~k~~~~~~~iLigivvg~~~a~ 104 (308)
+--++..-+-.+|+++|.+...
T Consensus 372 ---g~~~~gigaafWgl~~G~~~~~ 393 (395)
T TIGR00843 372 ---GLHFLGIGSAFWGLCAGGLAYF 393 (395)
T ss_pred ---cCCcccccHHHHHHHHHHHHHH
Confidence 2234556689999999977654
No 22
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=34.02 E-value=4.5e+02 Score=25.58 Aligned_cols=34 Identities=12% Similarity=0.192 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHH
Q 021712 8 IIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVA 41 (308)
Q Consensus 8 vlvaGll~illg~tg~~~~l~~~~Pp~V~g~~l~ 41 (308)
.+++|++.+++++.+....+.+.+|..+.+.+..
T Consensus 298 ~~~~~~~lil~~l~~~~~~l~~~iP~~vlgg~~l 331 (406)
T TIGR03173 298 VAAAGVILVLLGLFPKLAALVASIPQPVLGGAGL 331 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 4778999999998877899999999887776443
No 23
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=33.12 E-value=2.5e+02 Score=28.09 Aligned_cols=36 Identities=14% Similarity=0.213 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHH
Q 021712 7 AIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAA 42 (308)
Q Consensus 7 avlvaGll~illg~tg~~~~l~~~~Pp~V~g~~l~l 42 (308)
.+..+|++.+++|+.+-+..+...+|..|.|.+...
T Consensus 319 v~~~aa~ilillgl~PK~~alia~IP~pVlGg~~~~ 354 (433)
T PRK11412 319 SFIYGSVMCLLVALIPALTRLFCSIPLPVSSAVMLV 354 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 356789999999998888899999998887766543
No 24
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=28.28 E-value=1.5e+02 Score=29.12 Aligned_cols=35 Identities=17% Similarity=0.255 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHH
Q 021712 7 AIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVA 41 (308)
Q Consensus 7 avlvaGll~illg~tg~~~~l~~~~Pp~V~g~~l~ 41 (308)
+..++|++.+++++.+-+..+.+.+|..+.|....
T Consensus 313 ~~~~~a~~~i~~~l~pk~~~l~~~iP~~vlgg~~l 347 (415)
T TIGR00801 313 VIVGAAVILIALGFFPKIAALITSIPSPVLGGASI 347 (415)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 46778999999999766899999999877776554
No 25
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=26.82 E-value=2.8e+02 Score=28.44 Aligned_cols=40 Identities=10% Similarity=0.159 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhcCcccHHHHHHHHHhhhhh
Q 021712 8 IIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFS 49 (308)
Q Consensus 8 vlvaGll~illg~tg~~~~l~~~~Pp~V~g~~l~lIGl~l~~ 49 (308)
-++++++..+..+ +...+.+++|..+.+.++..++..+..
T Consensus 336 ~i~~~~~~l~~~l--~~~~~l~~iP~~~la~ili~~~~~l~~ 375 (563)
T TIGR00815 336 GVVTAIVVLLVLL--VLTPLFYYIPQAALAAIIISAVRGLID 375 (563)
T ss_pred HHHHHHHHHHHHH--HHHHHHHhChHHHHHHHHHHHHhcccC
Confidence 3555655555544 357789999999999999998887653
No 26
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=25.79 E-value=3.2e+02 Score=26.90 Aligned_cols=86 Identities=14% Similarity=0.198 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHhhh-HHHHHHhhcCcccHHHHHHHHHhhhhhh---hccC-CCCcccchHHHHHHHHHHHHHHHHHHH
Q 021712 7 AIIVGSIFQSILGFTG-LMSLFLRLINPVVVAPTVAAIGLAFFSY---GFPQ-AGSCVEISIPQILLVLIFALYLRGISV 81 (308)
Q Consensus 7 avlvaGll~illg~tg-~~~~l~~~~Pp~V~g~~l~lIGl~l~~~---~~~~-~gs~~~i~~~~~~lv~~v~l~~~~~~~ 81 (308)
+-+.+|++++++|+++ ..-.+...+|+..+.. +-|+.+.+. .+.. ..+..+-..+.+++++..
T Consensus 287 Aav~~Gv~yll~Gl~a~~~v~l~~~lP~~li~~---lAGLALlg~l~~sl~~A~~~~~~r~aAlvtFlvta--------- 354 (378)
T PF03594_consen 287 AAVAAGVFYLLFGLFAAALVALFAALPPALIAA---LAGLALLGTLGGSLQTAFSDEKYREAALVTFLVTA--------- 354 (378)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhCCHHHHHH---HHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH---------
Confidence 4578899999998753 3344556788876663 335555432 1111 122211112333333332
Q ss_pred hhcchhhhhhHHHHHHHHHHHHH
Q 021712 82 FGHHLFRIYAVPLSVMIIWAYAF 104 (308)
Q Consensus 82 ~~k~~~~~~~iLigivvg~~~a~ 104 (308)
.+-.++..-+-.+|+++|.+.+.
T Consensus 355 SGisl~gIgaafWgLv~G~~~~~ 377 (378)
T PF03594_consen 355 SGISLLGIGAAFWGLVAGLLVHL 377 (378)
T ss_pred cCCCcccccHHHHHHHHHHHHHh
Confidence 23335566689999999998753
No 27
>PRK11660 putative transporter; Provisional
Probab=25.05 E-value=3.8e+02 Score=27.52 Aligned_cols=26 Identities=8% Similarity=0.138 Sum_probs=22.3
Q ss_pred HHHHHhhcCcccHHHHHHHHHhhhhh
Q 021712 24 MSLFLRLINPVVVAPTVAAIGLAFFS 49 (308)
Q Consensus 24 ~~~l~~~~Pp~V~g~~l~lIGl~l~~ 49 (308)
...+.+++|..+.+.++..+|+.++.
T Consensus 370 l~~ll~~iP~~vLa~ili~~~~~m~~ 395 (568)
T PRK11660 370 LAPLLSYLPLSAMAALLLMVAWNMSE 395 (568)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHhhh
Confidence 46789999999999999999987753
No 28
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=23.65 E-value=4e+02 Score=27.54 Aligned_cols=27 Identities=11% Similarity=0.328 Sum_probs=23.2
Q ss_pred HHHHHHhhcCcccHHHHHHHHHhhhhh
Q 021712 23 LMSLFLRLINPVVVAPTVAAIGLAFFS 49 (308)
Q Consensus 23 ~~~~l~~~~Pp~V~g~~l~lIGl~l~~ 49 (308)
+...+..++|-.+.+.++..+|..++.
T Consensus 338 ~~~~~~~~IP~a~Laavli~v~~~l~~ 364 (554)
T COG0659 338 FLAPLVSYIPLAALAAVLILVGWGLLD 364 (554)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHhcc
Confidence 468888999999999999999987763
Done!