BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021714
(308 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1LHP|A Chain A, Crystal Structure Of Pyridoxal Kinase From Sheep Brain
pdb|1LHP|B Chain B, Crystal Structure Of Pyridoxal Kinase From Sheep Brain
pdb|1LHR|A Chain A, Crystal Structure Of Pyridoxal Kinase Complexed With Atp
pdb|1LHR|B Chain B, Crystal Structure Of Pyridoxal Kinase Complexed With Atp
pdb|1RFT|A Chain A, Crystal Structure Of Pyridoxal Kinase Complexed With Amp-
Pcp And Pyridoxamine
pdb|1RFU|A Chain A, Crystal Structure Of Pyridoxal Kinase Complexed With Adp
And Plp
pdb|1RFU|B Chain B, Crystal Structure Of Pyridoxal Kinase Complexed With Adp
And Plp
pdb|1RFU|C Chain C, Crystal Structure Of Pyridoxal Kinase Complexed With Adp
And Plp
pdb|1RFU|D Chain D, Crystal Structure Of Pyridoxal Kinase Complexed With Adp
And Plp
pdb|1RFU|E Chain E, Crystal Structure Of Pyridoxal Kinase Complexed With Adp
And Plp
pdb|1RFU|F Chain F, Crystal Structure Of Pyridoxal Kinase Complexed With Adp
And Plp
pdb|1RFU|G Chain G, Crystal Structure Of Pyridoxal Kinase Complexed With Adp
And Plp
pdb|1RFU|H Chain H, Crystal Structure Of Pyridoxal Kinase Complexed With Adp
And Plp
pdb|1RFV|A Chain A, Crystal Structure Of Pyridoxal Kinase Complexed With Adp
pdb|1RFV|B Chain B, Crystal Structure Of Pyridoxal Kinase Complexed With Adp
pdb|1YGJ|A Chain A, Crystal Structure Of Pyridoxal Kinase In Complex With
Roscovitine And Derivatives
pdb|1YGK|A Chain A, Crystal Structure Of Pyridoxal Kinase In Complex With
Roscovitine And Derivatives
pdb|1YHJ|A Chain A, Crystal Structure Of Pyridoxal Kinase In Complex With
Roscovitine And Derivatives
Length = 312
Score = 285 bits (728), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 144/306 (47%), Positives = 208/306 (67%), Gaps = 21/306 (6%)
Query: 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQL 72
E RVLSIQSH V+GYVGN++A FPLQ+LG++VD ++SVQFSNHTGY +KGQVLN +L
Sbjct: 3 EECRVLSIQSHVVRGYVGNRAATFPLQVLGFEVDAVNSVQFSNHTGYSHWKGQVLNSDEL 62
Query: 73 CDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD---- 128
+L +GL+ N++ Y ++LTGY SFL ++ +V++L+ NP L+YVCDPVMGD
Sbjct: 63 QELYDGLKLNHVNQYDYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVMGDQRNG 122
Query: 129 EGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAK 188
EG +YVP +L+ VYREKVVPVA ++TPNQFEAE LTG +I S+ + E +LH+ GP
Sbjct: 123 EGAMYVPDDLLPVYREKVVPVADIITPNQFEAELLTGRKIHSQEEALEVMDMLHSMGPDT 182
Query: 189 VVITSINI-----DGNLFLIGSHQKEKGQSP------EQFKIVIPKIPAYFTGTGDLMTA 237
VVITS N+ L +GS ++ ++P ++ ++ + K+ A F GTGDL A
Sbjct: 183 VVITSSNLLSPRGSDYLMALGS---QRTRAPDGSVVTQRIRMEMHKVDAVFVGTGDLFAA 239
Query: 238 LLLGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYVTA---GFDPQSSSLEIRLIQSQDD 294
+LL W++K+ +NL +A E VS++ +LQRT+ G P + LE+R++QS+ D
Sbjct: 240 MLLAWTHKHPNNLKVACEKTVSAMHHVLQRTIKCAKAKSGEGVKPSPAQLELRMVQSKKD 299
Query: 295 IRNPQV 300
I +P++
Sbjct: 300 IESPEI 305
>pdb|2YXT|A Chain A, Human Pyridoxal Kinase
pdb|2YXT|B Chain B, Human Pyridoxal Kinase
pdb|2YXU|A Chain A, Human Pyridoxal Kinase
pdb|2YXU|B Chain B, Human Pyridoxal Kinase
pdb|3KEU|A Chain A, Crystal Structure Of Human Pl Kinase With Bound Plp And
Atp
pdb|3KEU|B Chain B, Crystal Structure Of Human Pl Kinase With Bound Plp And
Atp
pdb|4EN4|A Chain A, Crystal Structure Of The Ternary Human Pl
Kinase-Ginkgotoxin-Mgatp Complex
pdb|4EN4|B Chain B, Crystal Structure Of The Ternary Human Pl
Kinase-Ginkgotoxin-Mgatp Complex
pdb|4EOH|A Chain A, Crystal Structure Of Human Pl Kinase With Bound
Theophylline
pdb|4EOH|B Chain B, Crystal Structure Of Human Pl Kinase With Bound
Theophylline
Length = 312
Score = 282 bits (721), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 203/303 (66%), Gaps = 15/303 (4%)
Query: 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQL 72
E RVLSIQSH ++GYVGN++A FPLQ+LG+++D ++SVQFSNHTGY +KGQVLN +L
Sbjct: 3 EECRVLSIQSHVIRGYVGNRAATFPLQVLGFEIDAVNSVQFSNHTGYAHWKGQVLNSDEL 62
Query: 73 CDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD---- 128
+L EGL NN+ Y ++LTGY SFL ++ +V++L+ NP L+YVCDPV+GD
Sbjct: 63 QELYEGLRLNNMNKYDYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDG 122
Query: 129 EGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAK 188
EG +YVP +L+ VY+EKVVP+A ++TPNQFEAE L+G +I S+ + +LH+ GP
Sbjct: 123 EGSMYVPEDLLPVYKEKVVPLADIITPNQFEAELLSGRKIHSQEEALRVMDMLHSMGPDT 182
Query: 189 VVITSINI-----DGNLFLIGSHQKEKGQSP---EQFKIVIPKIPAYFTGTGDLMTALLL 240
VVITS ++ L ++GS ++ E+ ++ I K+ A F GTGDL A+LL
Sbjct: 183 VVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKVDAVFVGTGDLFAAMLL 242
Query: 241 GWSNKYRDNLDIAAELAVSSLQALLQRTV---NDYVTAGFDPQSSSLEIRLIQSQDDIRN 297
W++K+ +NL +A E VS+L +LQRT+ G P LE+R++QS+ DI +
Sbjct: 243 AWTHKHPNNLKVACEKTVSTLHHVLQRTIQCAKAQAGEGVRPSPMQLELRMVQSKRDIED 302
Query: 298 PQV 300
P++
Sbjct: 303 PEI 305
>pdb|2F7K|A Chain A, Crystal Structure Of Human Pyridoxal Kinase
pdb|2F7K|B Chain B, Crystal Structure Of Human Pyridoxal Kinase
Length = 327
Score = 281 bits (720), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 203/303 (66%), Gaps = 15/303 (4%)
Query: 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQL 72
E RVLSIQSH ++GYVGN++A FPLQ+LG+++D ++SVQFSNHTGY +KGQVLN +L
Sbjct: 18 EECRVLSIQSHVIRGYVGNRAATFPLQVLGFEIDAVNSVQFSNHTGYAHWKGQVLNSDEL 77
Query: 73 CDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD---- 128
+L EGL NN+ Y ++LTGY SFL ++ +V++L+ NP L+YVCDPV+GD
Sbjct: 78 QELYEGLRLNNMNKYDYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDG 137
Query: 129 EGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAK 188
EG +YVP +L+ VY+EKVVP+A ++TPNQFEAE L+G +I S+ + +LH+ GP
Sbjct: 138 EGSMYVPEDLLPVYKEKVVPLADIITPNQFEAELLSGRKIHSQEEALRVMDMLHSMGPDT 197
Query: 189 VVITSINI-----DGNLFLIGSHQKEKGQSP---EQFKIVIPKIPAYFTGTGDLMTALLL 240
VVITS ++ L ++GS ++ E+ ++ I K+ A F GTGDL A+LL
Sbjct: 198 VVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKVDAVFVGTGDLFAAMLL 257
Query: 241 GWSNKYRDNLDIAAELAVSSLQALLQRTV---NDYVTAGFDPQSSSLEIRLIQSQDDIRN 297
W++K+ +NL +A E VS+L +LQRT+ G P LE+R++QS+ DI +
Sbjct: 258 AWTHKHPNNLKVACEKTVSTLHHVLQRTIQCAKAQAGEGVRPSPMQLELRMVQSKRDIED 317
Query: 298 PQV 300
P++
Sbjct: 318 PEI 320
>pdb|2AJP|A Chain A, Crystal Structure Of A Human Pyridoxal Kinase
pdb|2AJP|B Chain B, Crystal Structure Of A Human Pyridoxal Kinase
Length = 326
Score = 280 bits (716), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 139/300 (46%), Positives = 202/300 (67%), Gaps = 15/300 (5%)
Query: 16 RVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDL 75
RVLSIQSH ++GYVGN++A FPLQ+LG+++D ++SVQFSNHTGY +KGQVLN +L +L
Sbjct: 20 RVLSIQSHVIRGYVGNRAATFPLQVLGFEIDAVNSVQFSNHTGYAHWKGQVLNSDELQEL 79
Query: 76 IEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD----EGK 131
EGL NN+ Y ++LTGY SFL ++ +V++L+ NP L+YVCDPV+GD EG
Sbjct: 80 YEGLRLNNMNKYDYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGS 139
Query: 132 LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVI 191
+YVP +L+ VY+EKVVP+A ++TPNQFEAE L+G +I S+ + +LH+ GP VVI
Sbjct: 140 MYVPEDLLPVYKEKVVPLADIITPNQFEAELLSGRKIHSQEEALRVMDMLHSMGPDTVVI 199
Query: 192 TSINI-----DGNLFLIGSHQKEKGQSP---EQFKIVIPKIPAYFTGTGDLMTALLLGWS 243
TS ++ L ++GS ++ E+ ++ I K+ A F GTGDL A+LL W+
Sbjct: 200 TSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKVDAVFVGTGDLFAAMLLAWT 259
Query: 244 NKYRDNLDIAAELAVSSLQALLQRTV---NDYVTAGFDPQSSSLEIRLIQSQDDIRNPQV 300
+K+ +NL +A E VS+L +LQRT+ G P LE+R++QS+ DI +P++
Sbjct: 260 HKHPNNLKVACEKTVSTLHHVLQRTIQCAKAQAGEGVRPSPMQLELRMVQSKRDIEDPEI 319
>pdb|3FHY|A Chain A, Crystal Structure Of D235n Mutant Of Human Pyridoxal
Kinase
pdb|3FHY|B Chain B, Crystal Structure Of D235n Mutant Of Human Pyridoxal
Kinase
Length = 312
Score = 280 bits (716), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 139/303 (45%), Positives = 203/303 (66%), Gaps = 15/303 (4%)
Query: 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQL 72
E RVLSIQSH ++GYVGN++A FPLQ+LG+++D ++SVQFSNHTGY +KGQVLN +L
Sbjct: 3 EECRVLSIQSHVIRGYVGNRAATFPLQVLGFEIDAVNSVQFSNHTGYAHWKGQVLNSDEL 62
Query: 73 CDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD---- 128
+L EGL NN+ Y ++LTGY SFL ++ +V++L+ NP L+YVCDPV+GD
Sbjct: 63 QELYEGLRLNNMNKYDYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDG 122
Query: 129 EGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAK 188
EG +YVP +L+ VY+EKVVP+A ++TPNQFEAE L+G +I S+ + +LH+ GP
Sbjct: 123 EGSMYVPEDLLPVYKEKVVPLADIITPNQFEAELLSGRKIHSQEEALRVMDMLHSMGPDT 182
Query: 189 VVITSINI-----DGNLFLIGSHQKEKGQSP---EQFKIVIPKIPAYFTGTGDLMTALLL 240
VVITS ++ L ++GS ++ E+ ++ I K+ A F GTG+L A+LL
Sbjct: 183 VVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKVDAVFVGTGNLFAAMLL 242
Query: 241 GWSNKYRDNLDIAAELAVSSLQALLQRTV---NDYVTAGFDPQSSSLEIRLIQSQDDIRN 297
W++K+ +NL +A E VS+L +LQRT+ G P LE+R++QS+ DI +
Sbjct: 243 AWTHKHPNNLKVACEKTVSTLHHVLQRTIQCAKAQAGEGVRPSPMQLELRMVQSKRDIED 302
Query: 298 PQV 300
P++
Sbjct: 303 PEI 305
>pdb|3FHX|A Chain A, Crystal Structure Of D235a Mutant Of Human Pyridoxal
Kinase
pdb|3FHX|B Chain B, Crystal Structure Of D235a Mutant Of Human Pyridoxal
Kinase
Length = 312
Score = 279 bits (713), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 139/303 (45%), Positives = 202/303 (66%), Gaps = 15/303 (4%)
Query: 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQL 72
E RVLSIQSH ++GYVGN++A FPLQ+LG+++D ++SVQFSNHTGY +KGQVLN +L
Sbjct: 3 EECRVLSIQSHVIRGYVGNRAATFPLQVLGFEIDAVNSVQFSNHTGYAHWKGQVLNSDEL 62
Query: 73 CDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD---- 128
+L EGL NN+ Y ++LTGY SFL ++ +V++L+ NP L+YVCDPV+GD
Sbjct: 63 QELYEGLRLNNMNKYDYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDG 122
Query: 129 EGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAK 188
EG +YVP +L+ VY+EKVVP+A ++TPNQFEAE L+G +I S+ + +LH+ GP
Sbjct: 123 EGSMYVPEDLLPVYKEKVVPLADIITPNQFEAELLSGRKIHSQEEALRVMDMLHSMGPDT 182
Query: 189 VVITSINI-----DGNLFLIGSHQKEKGQSP---EQFKIVIPKIPAYFTGTGDLMTALLL 240
VVITS ++ L ++GS ++ E+ ++ I K+ A F GTG L A+LL
Sbjct: 183 VVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKVDAVFVGTGALFAAMLL 242
Query: 241 GWSNKYRDNLDIAAELAVSSLQALLQRTV---NDYVTAGFDPQSSSLEIRLIQSQDDIRN 297
W++K+ +NL +A E VS+L +LQRT+ G P LE+R++QS+ DI +
Sbjct: 243 AWTHKHPNNLKVACEKTVSTLHHVLQRTIQCAKAQAGEGVRPSPMQLELRMVQSKRDIED 302
Query: 298 PQV 300
P++
Sbjct: 303 PEI 305
>pdb|3ZS7|A Chain A, Crystal Structure Of Pyridoxal Kinase From Trypanosoma
Brucei
Length = 300
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 168/292 (57%), Gaps = 17/292 (5%)
Query: 17 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLI 76
VLSIQS GYVGNK+A FPLQL G+DVD I++V SNH+GYP +G ++ Q+ +L+
Sbjct: 6 VLSIQSFVTHGYVGNKAATFPLQLHGFDVDGINTVCLSNHSGYPVIRGHRMSLQEYDELM 65
Query: 77 EGLEANNLLY-YTHLLTGYIGSVSFLNTILQVVEKLRSI----NPNLIYVCDPVMGDEGK 131
EG+ ANN L Y ++LTGYI +V + I ++++R + + L ++CDPVMGD+G
Sbjct: 66 EGVRANNFLSNYRYILTGYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGI 125
Query: 132 LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVI 191
+Y E++ YRE +VP+A ++TPN FEA L+G + + A H G A V+I
Sbjct: 126 MYCKKEVLDAYRE-LVPLADIVTPNYFEASLLSGVTVNDLSSAILAADWFHNCGVAHVII 184
Query: 192 TSINIDGN---LFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRD 248
S N L + S ++ + +F V+P +TGTGD+ A LL +S+ +
Sbjct: 185 KSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYHEGRYTGTGDVFAACLLAFSHSHPM 244
Query: 249 NLDIAAELAVSSLQALLQRTVNDYVTAGFDPQSS--SLEIRLIQSQDDIRNP 298
++ I +AV LQ L+ T + G D +SS S E+R++ S + P
Sbjct: 245 DVAIGKSMAV--LQELIIATRKE----GGDGKSSLKSRELRVVASPQVVLQP 290
>pdb|3PZS|A Chain A, Crystal Structure Of A Pyridoxamine Kinase From Yersinia
Pestis Co92
pdb|3PZS|B Chain B, Crystal Structure Of A Pyridoxamine Kinase From Yersinia
Pestis Co92
Length = 289
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 147/295 (49%), Gaps = 22/295 (7%)
Query: 17 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLI 76
+LSIQSH V G+ GN +A FP + G +V P+++VQFSNHT Y + G V L D++
Sbjct: 7 ILSIQSHVVFGHAGNSAAEFPXRRXGVNVWPLNTVQFSNHTQYGHWTGCVXPASHLTDIV 66
Query: 77 EGL-EANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG--DEGKLY 133
+G+ + + L +L+GYIGS + IL V +++ NP+ Y CDPV G ++G +
Sbjct: 67 QGIADIDRLKDCDAVLSGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVXGHPEKGCIV 126
Query: 134 VPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITS 193
P + + + +P + + PN E EQL+G R+ + + + L A GP V++
Sbjct: 127 APG-VAEFFCNEALPASDXIAPNLLELEQLSGERVENVEQAVQVARSLCARGPKVVLVKH 185
Query: 194 INIDGNLFLIGSHQKEKGQSPEQFKIVIPKI---PAYFTGTGDLMTALLLGWSNKYR-DN 249
++ G + + + + + I P + G GDL + LLL N + +
Sbjct: 186 LSRAG--YHADCFEXLLVTADDAWHICRPLVDFGKRQPVGVGDLTSGLLL--VNLLKGEP 241
Query: 250 LDIAAELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKFKS 304
LD A E +++ + +T + E++++ +Q+ I P +F +
Sbjct: 242 LDKALEHVTAAVYEVXLKT----------QEXGEYELQVVAAQETIVTPICQFTA 286
>pdb|1TD2|A Chain A, Crystal Structure Of The Pdxy Protein From Escherichia
Coli
pdb|1TD2|B Chain B, Crystal Structure Of The Pdxy Protein From Escherichia
Coli
Length = 287
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 148/306 (48%), Gaps = 40/306 (13%)
Query: 17 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLI 76
+L+IQSH V G+ GN +A FP++ LG +V P+++VQFSNHT Y + G V+ L +++
Sbjct: 5 ILAIQSHVVYGHAGNSAAEFPMRRLGANVWPLNTVQFSNHTQYGKWTGCVMPPSHLTEIV 64
Query: 77 EGLEANNLLYYTH-LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG--DEGKLY 133
+G+ A + L+ +L+GY+GS IL +V ++++ NP Y CDPVMG ++G +
Sbjct: 65 QGIAAIDKLHTCDAVLSGYLGSAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKGCIV 124
Query: 134 VPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITS 193
P + + +P + ++ PN E E L + + + A + L A GP V++
Sbjct: 125 APG-VAEFHVRHGLPASDIIAPNLVELEILCEHAVNNVEEAVLAARELIAQGPQIVLVKH 183
Query: 194 INIDG------NLFLIGSHQKEKGQSP-EQFKIVIPKIPAYFTGTGDLMTALLLGWSNKY 246
+ G + L+ + + P F + P G GD+ + LLL
Sbjct: 184 LARAGYSRDRFEMLLVTADEAWHISRPLVDFGMRQP------VGVGDVTSGLLL------ 231
Query: 247 RDNLDIAAELAVSSLQ-ALLQRTVNDYVTAGFDPQSSS-----LEIRLIQSQDDIRNPQV 300
V LQ A LQ + A ++ ++ E++++ +QD I P+
Sbjct: 232 -----------VKLLQGATLQEALEHVTAAVYEIMVTTKAMQEYELQVVAAQDRIAKPEH 280
Query: 301 KFKSEK 306
F + K
Sbjct: 281 YFSATK 286
>pdb|1VI9|A Chain A, Crystal Structure Of Pyridoxamine Kinase
pdb|1VI9|B Chain B, Crystal Structure Of Pyridoxamine Kinase
pdb|1VI9|C Chain C, Crystal Structure Of Pyridoxamine Kinase
pdb|1VI9|D Chain D, Crystal Structure Of Pyridoxamine Kinase
Length = 299
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 143/313 (45%), Gaps = 54/313 (17%)
Query: 17 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLI 76
+L+IQSH V G+ GN +A FP + LG +V P+++VQFSNHT Y + G V L +++
Sbjct: 7 ILAIQSHVVYGHAGNSAAEFPXRRLGANVWPLNTVQFSNHTQYGKWTGXVXPPSHLTEIV 66
Query: 77 EGLEANNLLYYTH-LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG--DEGKLY 133
+G+ A + L+ +L+GY+GS IL +V ++++ NP Y CDPV G ++G +
Sbjct: 67 QGIAAIDKLHTCDAVLSGYLGSAEQGEHILGIVRQVKAANPQAKYFCDPVXGHPEKGCIV 126
Query: 134 VPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITS 193
P + + +P + ++ PN E E L + + + A + L A GP V++
Sbjct: 127 APG-VAEFHVRHGLPASDIIAPNLVELEILCEHAVNNVEEAVLAARELIAQGPQIVLV-- 183
Query: 194 INIDGNLFLIGSHQKEKGQSPEQFK-IVIPKIPAYF-------------TGTGDLMTALL 239
H G S ++F+ +++ A+ G GD+ + LL
Sbjct: 184 -----------KHLARAGYSRDRFEXLLVTADEAWHISRPLVDFGXRQPVGVGDVTSGLL 232
Query: 240 LGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYVTAGF------DPQSSSLEIRLIQSQD 293
L V LQ + ++VTA E++++ +QD
Sbjct: 233 L-----------------VKLLQGATLQEALEHVTAAVYEIXVTTKAXQEYELQVVAAQD 275
Query: 294 DIRNPQVKFKSEK 306
I P+ F + K
Sbjct: 276 RIAKPEHYFSATK 288
>pdb|2DDM|A Chain A, Crystal Structure Of Pyridoxal Kinase From The Escherichia
Coli Pdxk Gene At 2.1 A Resolution
pdb|2DDM|B Chain B, Crystal Structure Of Pyridoxal Kinase From The Escherichia
Coli Pdxk Gene At 2.1 A Resolution
pdb|2DDO|A Chain A, Crystal Structure Of Pyridoxal Kinase From The Escherichia
Coli Pdxk Gene At 2.6 A Resolution
pdb|2DDO|B Chain B, Crystal Structure Of Pyridoxal Kinase From The Escherichia
Coli Pdxk Gene At 2.6 A Resolution
pdb|2DDW|A Chain A, Crystal Structure Of Pyridoxal Kinase From The Escherichia
Coli Pdxk Gene Complexed With Pyridoxal At 3.2 A
Resolution
pdb|2DDW|B Chain B, Crystal Structure Of Pyridoxal Kinase From The Escherichia
Coli Pdxk Gene Complexed With Pyridoxal At 3.2 A
Resolution
Length = 283
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 114/231 (49%), Gaps = 15/231 (6%)
Query: 17 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLI 76
++++QS V G VGN AV ++ G +V + +V SN Y TF G + + +
Sbjct: 18 IVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYL 77
Query: 77 EGL-EANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD-EGKLYV 134
L E + L + TGY+G+ S + + + + LR +P+L+ + DPV+GD + +YV
Sbjct: 78 RALQERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYV 137
Query: 135 PSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSI 194
+L YR+ ++P+A +TPN FE E LTG A K L + VV+TS
Sbjct: 138 KPDLPEAYRQYLLPLAQGITPNIFELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVVTSA 197
Query: 195 NIDGNLFLIGSHQKEKGQ----SPEQFKIVI-PKIPAYFTGTGDLMTALLL 240
+ G+ + ++ Q + + ++ ++ GTGDL A L+
Sbjct: 198 S--------GNEENQEMQVVVVTADSVNVISHSRVKTDLKGTGDLFCAQLI 240
>pdb|3MBJ|A Chain A, Crystal Structure Of A Putative Phosphomethylpyrimidine
Kinase (Bt_4458) From Bacteroides Thetaiotaomicron
Vpi-5482 At 2.10 A Resolution (Rhombohedral Form)
pdb|3MBH|A Chain A, Crystal Structure Of A Putative Phosphomethylpyrimidine
Kinase (bt_4458) From Bacteroides Thetaiotaomicron
Vpi-5482 At 2.00 A Resolution (orthorhombic Form With
Pyridoxal)
pdb|3MBH|B Chain B, Crystal Structure Of A Putative Phosphomethylpyrimidine
Kinase (bt_4458) From Bacteroides Thetaiotaomicron
Vpi-5482 At 2.00 A Resolution (orthorhombic Form With
Pyridoxal)
pdb|3MBH|C Chain C, Crystal Structure Of A Putative Phosphomethylpyrimidine
Kinase (bt_4458) From Bacteroides Thetaiotaomicron
Vpi-5482 At 2.00 A Resolution (orthorhombic Form With
Pyridoxal)
pdb|3MBH|D Chain D, Crystal Structure Of A Putative Phosphomethylpyrimidine
Kinase (bt_4458) From Bacteroides Thetaiotaomicron
Vpi-5482 At 2.00 A Resolution (orthorhombic Form With
Pyridoxal)
pdb|3MBH|E Chain E, Crystal Structure Of A Putative Phosphomethylpyrimidine
Kinase (bt_4458) From Bacteroides Thetaiotaomicron
Vpi-5482 At 2.00 A Resolution (orthorhombic Form With
Pyridoxal)
pdb|3MBH|F Chain F, Crystal Structure Of A Putative Phosphomethylpyrimidine
Kinase (bt_4458) From Bacteroides Thetaiotaomicron
Vpi-5482 At 2.00 A Resolution (orthorhombic Form With
Pyridoxal)
Length = 291
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 10/214 (4%)
Query: 33 SAVFP-LQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLL 91
+ V P L G+ V P+ + SNHT YP F L + + E + + + +
Sbjct: 25 TVVIPILSSXGFQVCPLPTAVLSNHTQYPGFSFLDLTDEXPKIIAEWKKLE--VQFDAIY 82
Query: 92 TGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREK-VVPVA 150
TGY+GS + + ++ R P+ + V DPV+GD G+LY + V + ++ A
Sbjct: 83 TGYLGSPRQIQIVSDFIKDFR--QPDSLIVADPVLGDNGRLYTNFDXEXVKEXRHLITKA 140
Query: 151 SMLTPNQFEAEQLTG--FRIGS-EADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQ 207
++TPN E L ++ S + + +E ++L GP V+ITS+ + +
Sbjct: 141 DVITPNLTELFYLLDEPYKADSTDEELKEYLRLLSDKGPQVVIITSVPVHDEPHKTSVYA 200
Query: 208 KEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLG 241
+ Q +K+ P +PA++ GTGD T+++ G
Sbjct: 201 YNR-QGNRYWKVTCPYLPAHYPGTGDTFTSVITG 233
>pdb|2I5B|A Chain A, The Crystal Structure Of An Adp Complex Of Bacillus
Subtilis Pyridoxal Kinase Provides Evidence For The
Parralel Emergence Of Enzyme Activity During Evolution
pdb|2I5B|C Chain C, The Crystal Structure Of An Adp Complex Of Bacillus
Subtilis Pyridoxal Kinase Provides Evidence For The
Parralel Emergence Of Enzyme Activity During Evolution
pdb|2I5B|D Chain D, The Crystal Structure Of An Adp Complex Of Bacillus
Subtilis Pyridoxal Kinase Provides Evidence For The
Parralel Emergence Of Enzyme Activity During Evolution
pdb|2I5B|B Chain B, The Crystal Structure Of An Adp Complex Of Bacillus
Subtilis Pyridoxal Kinase Provides Evidence For The
Parralel Emergence Of Enzyme Activity During Evolution
pdb|2I5B|E Chain E, The Crystal Structure Of An Adp Complex Of Bacillus
Subtilis Pyridoxal Kinase Provides Evidence For The
Parralel Emergence Of Enzyme Activity During Evolution
Length = 271
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 10/107 (9%)
Query: 90 LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK---LYVPSELVSVYREKV 146
+ TG + +V + + +++ + N V DPVM +G LY E RE++
Sbjct: 78 MKTGMLPTVDIIELAAKTIKEKQLKN----VVIDPVMVCKGANEVLY--PEHAQALREQL 131
Query: 147 VPVASMLTPNQFEAEQLTGF-RIGSEADGREACKILHAAGPAKVVIT 192
P+A+++TPN FEA QL+G + + D EA K +HA G VVIT
Sbjct: 132 APLATVITPNLFEASQLSGMDELKTVDDMIEAAKKIHALGAQYVVIT 178
>pdb|1RK2|A Chain A, E. Coli Ribokinase Complexed With Ribose And Adp, Solved
In Space Group P212121
pdb|1RK2|B Chain B, E. Coli Ribokinase Complexed With Ribose And Adp, Solved
In Space Group P212121
pdb|1RK2|C Chain C, E. Coli Ribokinase Complexed With Ribose And Adp, Solved
In Space Group P212121
pdb|1RK2|D Chain D, E. Coli Ribokinase Complexed With Ribose And Adp, Solved
In Space Group P212121
pdb|1RKA|A Chain A, The Apo Form Of E. Coli Ribokinase
pdb|1RKS|A Chain A, E. Coli Ribokinase In Complex With D-Ribose
pdb|1GQT|A Chain A, Activation Of Ribokinase By Monovalent Cations
pdb|1GQT|B Chain B, Activation Of Ribokinase By Monovalent Cations
pdb|1GQT|C Chain C, Activation Of Ribokinase By Monovalent Cations
pdb|1GQT|D Chain D, Activation Of Ribokinase By Monovalent Cations
pdb|1RKD|A Chain A, E. Coli Ribokinase Complexed With Ribose And Adp
Length = 309
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Query: 144 EKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLI 203
++++ + ++TPN+ EAE+LTG R+ ++ D +A ++LH G V+IT G+ +
Sbjct: 175 DELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITL----GSRGVW 230
Query: 204 GSHQKEKGQSPEQFKI-VIPKIPAYFTGTGDLMTALL 239
S E GQ F++ + I A T G L+TALL
Sbjct: 231 ASVNGE-GQRVPGFRVQAVDTIAAGDTFNGALITALL 266
>pdb|3H74|A Chain A, Crystal Structure Of Pyridoxal Kinase From Lactobacillus
Plantarum
pdb|3HYO|A Chain A, Crystal Structure Of Pyridoxal Kinase From Lactobacillus
Plantarum In Complex With Adp
pdb|3IBQ|A Chain A, Crystal Structure Of Pyridoxal Kinase From Lactobacillus
Plantarum In Complex With Atp
Length = 282
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 95/224 (42%), Gaps = 25/224 (11%)
Query: 27 GYVGNKSAVFPLQLLGYDVDPIHSVQFSNHT-GYPTFKGQVLNGQQLCDLIEGLEANNLL 85
G + SA+ L YDV + + S HT GY T V++ + L
Sbjct: 16 GGISLSSALPVLTAXQYDVAALPTSLLSTHTSGYGTPA--VVDLSTWLPQVFAHWTRAQL 73
Query: 86 YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLY--VPSELVSVYR 143
++ L GY+GSV+ I +E+ ++++ + V DPV+GD G+LY + V+ R
Sbjct: 74 HFDQALIGYVGSVALCQQITTYLEQ-QTLS---LLVVDPVLGDLGQLYQGFDQDYVAAXR 129
Query: 144 EKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHA--AGPAKVVITSI----NID 197
+ ++ A ++ PN EA LTG D L A A VIT + I
Sbjct: 130 Q-LIQQADVILPNTTEAALLTGAPYQVTPDLEVILPALQAQLKTGAHAVITDVQRADQIG 188
Query: 198 GNLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLG 241
H + G ++P ++ GTGD + A++ G
Sbjct: 189 CAWLDEAGHVQYCGAR---------RLPGHYNGTGDTLAAVIAG 223
>pdb|2FV7|A Chain A, Crystal Structure Of Human Ribokinase
pdb|2FV7|B Chain B, Crystal Structure Of Human Ribokinase
Length = 331
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 132 LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVI 191
L+ P+ ++ + ++ + N+ EAE LTG +GS AD EA +L G +VVI
Sbjct: 184 LFNPAPAIADLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRG-CQVVI 242
Query: 192 TSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIPAY-FTGTGDLMTALLLGWSNKY---- 246
++ +G + L Q E PE I K+ A TG GD L + Y
Sbjct: 243 ITLGAEGCVVL---SQTE----PEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAYYPNLS 295
Query: 247 -RDNLDIAAELAVSSLQA 263
D L+ + +A S+QA
Sbjct: 296 LEDMLNRSNFIAAVSVQA 313
>pdb|3RY7|A Chain A, Crystal Sructure Of Sa239
Length = 304
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 17/117 (14%)
Query: 134 VPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITS 193
+P+EL+S+ ++ PN+ EAE L+G ++ +E ++ + G V+IT
Sbjct: 172 LPNELLSLI--------DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSIGIKTVLIT- 222
Query: 194 INIDGNLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNL 250
+ G F K + Q E +K+ T GD + NK +DNL
Sbjct: 223 LGKQGTYFAT----KNQSQHIEAYKVNAIDT----TAAGDTFIGAFVSRLNKSQDNL 271
>pdb|1UB0|A Chain A, Crystal Structure Analysis Of Phosphomethylpyrimidine
Kinase (Thid) From Thermus Thermophilus Hb8
Length = 258
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 121 VCDPVM-GDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACK 179
V DPVM G + E + +E++ P+A ++TPN+ EAE L G I + + EA K
Sbjct: 101 VVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLGRPIRTLKEAEEAAK 160
Query: 180 ILHAAGPAKVVITSINIDGN 199
L A GP V++ +++G
Sbjct: 161 ALLALGPKAVLLKGGHLEGE 180
>pdb|3RM5|A Chain A, Structure Of Trifunctional Thi20 From Yeast
pdb|3RM5|B Chain B, Structure Of Trifunctional Thi20 From Yeast
Length = 550
Score = 31.6 bits (70), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 121 VCDPVM-GDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165
V DPV+ G ++VS+ EKV P A +LTPN E +L G
Sbjct: 123 VVDPVLVATSGSSLAGKDIVSLITEKVAPFADILTPNIPECYKLLG 168
>pdb|1LME|A Chain A, Crystal Structure Of Peptide Deformylase From Thermotoga
Maritima
pdb|1LME|B Chain B, Crystal Structure Of Peptide Deformylase From Thermotoga
Maritima
Length = 176
Score = 27.7 bits (60), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 114 INPNLIYVCDPV--MGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFR---I 168
INP ++ + DP + +EG L P V + R K + V T ++ E+L G+
Sbjct: 81 INPEILEI-DPETEVAEEGXLSFPEIFVEIERSKRIKVKYQNTRGEYVEEELEGYAARVF 139
Query: 169 GSEADGREACKILHAAGPAK 188
E D I+ PAK
Sbjct: 140 QHEFDHLNGVLIIDRISPAK 159
>pdb|2NAP|A Chain A, Dissimilatory Nitrate Reductase (Nap) From Desulfovibrio
Desulfuricans
pdb|2JIM|A Chain A, A New Catalytic Mechanism Of Periplasmic Nitrate Reductase
From Desulfovibrio Desulfuricans Atcc 27774 From
Crystallographic And Epr Data And Based On Detailed
Analysis Of The Sixth Ligand
pdb|2JIP|A Chain A, A New Catalytic Mechanism Of Periplasmic Nitrate Reductase
From Desulfovibrio Desulfuricans Atcc 27774 From
Crystallographic And Epr Data And Based On Detailed
Analysis Of The Sixth Ligand
pdb|2JIR|A Chain A, A New Catalytic Mechanism Of Periplasmic Nitrate Reductase
From Desulfovibrio Desulfuricans Atcc 27774 From
Crystallographic And Epr Data And Based On Detailed
Analysis Of The Sixth Ligand
pdb|2V45|A Chain A, A New Catalytic Mechanism Of Periplasmic Nitrate Reductase
From Desulfovibrio Desulfuricans Atcc 27774 From
Crystallographic And Epr Data And Based On Detailed
Analysis Of The Sixth Ligand
Length = 723
Score = 27.7 bits (60), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 3/28 (10%)
Query: 76 IEGLEANNLLYYTHLLTGYI---GSVSF 100
++G+ ANNL++ HL+TG I G+ SF
Sbjct: 314 VQGVFANNLIHNLHLITGQICRPGATSF 341
>pdb|2JIO|A Chain A, A New Catalytic Mechanism Of Periplasmic Nitrate Reductase
From Desulfovibrio Desulfuricans Atcc 27774 From
Crystallographic And Epr Data And Based On Detailed
Analysis Of The Sixth Ligand
pdb|2JIQ|A Chain A, A New Catalytic Mechanism Of Periplasmic Nitrate Reductase
From Desulfovibrio Desulfuricans Atcc 27774 From
Crystallographic And Epr Data And Based On Detailed
Analysis Of The Sixth Ligand
pdb|2V3V|A Chain A, A New Catalytic Mechanism Of Periplasmic Nitrate Reductase
From Desulfovibrio Desulfuricans Atcc 27774 From
Crystallographic And Epr Data And Based On Detailed
Analysis Of The Sixth Ligand
Length = 723
Score = 27.7 bits (60), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 3/28 (10%)
Query: 76 IEGLEANNLLYYTHLLTGYI---GSVSF 100
++G+ ANNL++ HL+TG I G+ SF
Sbjct: 314 VQGVFANNLIHNLHLITGQICRPGATSF 341
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.136 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,092,542
Number of Sequences: 62578
Number of extensions: 378818
Number of successful extensions: 946
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 893
Number of HSP's gapped (non-prelim): 27
length of query: 308
length of database: 14,973,337
effective HSP length: 99
effective length of query: 209
effective length of database: 8,778,115
effective search space: 1834626035
effective search space used: 1834626035
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)