BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021718
(308 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7XUW5|HS232_ORYSJ 23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica
GN=HSP23.2 PE=2 SV=2
Length = 215
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 15/96 (15%)
Query: 22 TEWAREDEFDTLIVNLPGFRKEQLKVQVTTSKKMRISGERPL--------GNNKW----- 68
+W + ++V++PG RKE L+V+V ++ +RISGER G + W
Sbjct: 78 VDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREER 137
Query: 69 --SSFSKEFPISSNYDFNEISAKFEGGKLFIKHPKI 102
F ++ + N D + I+A + G L ++ K+
Sbjct: 138 SYGRFWRQLRLPDNADLDSIAASLDNGVLTVRFRKL 173
>sp|P19244|HSP41_PEA 22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7
PE=2 SV=1
Length = 197
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 22/124 (17%)
Query: 16 EKFEPS-------TEWAREDEFDTLIVNLPGFRKEQLKVQVTTSKKMRISGERPLGNNK- 67
EK EPS +W E ++V++PG +K+ +K++V ++ +R+SGER +K
Sbjct: 64 EKHEPSITLSHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKK 123
Query: 68 ----------WSSFSKEFPISSNYDFNEISAKFEGGKLFIKHPKIITPADHQQEEKPQAQ 117
+ F ++F + N D + + AK E G L + K+ H + + P+
Sbjct: 124 GDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTLTLHKL----SHDKIKGPRMV 179
Query: 118 AVTE 121
++ E
Sbjct: 180 SIVE 183
>sp|P13853|HS17C_ARATH 17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana
GN=HSP17.6C PE=2 SV=2
Length = 157
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 18/109 (16%)
Query: 22 TEWAREDEFDTLIVNLPGFRKEQLKVQVTTSKKMRISGERP----LGNNKW-------SS 70
+W E +LPG RKE++KV+V ++ISGER N+KW
Sbjct: 52 VDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGK 111
Query: 71 FSKEFPISSNYDFNEISAKFEGGKLFIKHPKIITPADHQQEEKPQAQAV 119
F++ F + N EI A E G L + PK+ E+KP+ +++
Sbjct: 112 FTRRFRLPENAKMEEIKASMENGVLSVTVPKV-------PEKKPEVKSI 153
>sp|P30236|HSP41_SOYBN 22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3
SV=1
Length = 192
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 23/112 (20%)
Query: 22 TEWAREDEFDTLIVNLPGFRKEQLKVQVTTSKKMRISG----ERPLGNNKW-------SS 70
+W E +++++PG ++E++KV+V ++ +R+SG E + W
Sbjct: 69 VDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGK 128
Query: 71 FSKEFPISSNYDFNEISAKFEGGKLF----------IKHPKIITPA--DHQQ 110
F ++F + N D + + AK E G L IK P++++ A DHQQ
Sbjct: 129 FWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLSPGKIKGPRVVSIAGEDHQQ 180
>sp|P04794|HSP14_SOYBN 17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E
PE=3 SV=1
Length = 154
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 18/109 (16%)
Query: 22 TEWAREDEFDTLIVNLPGFRKEQLKVQVTTSKKMRISGERPL----GNNKW-------SS 70
+W E ++PG +KE++KVQ+ + ++ISGER + N+ W
Sbjct: 49 VDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGK 108
Query: 71 FSKEFPISSNYDFNEISAKFEGGKLFIKHPKIITPADHQQEEKPQAQAV 119
F++ F + N NE+ A E G L + PK ++ +KP +A+
Sbjct: 109 FTRRFRLPENAKVNEVKASMENGVLTVTVPK-------EEVKKPDVKAI 150
>sp|O49710|HS154_ARATH 15.4 kDa class V heat shock protein OS=Arabidopsis thaliana
GN=HSP15.4 PE=2 SV=1
Length = 134
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 6 LAAAQTNREYEKFEPSTEWAREDEFDTLIVNLPGFRKEQLKVQVTTSKKMRISGE-RPLG 64
+ A+Q+ Y+ E W++ + T V+LPG RKE++KV++ S + I E P+
Sbjct: 14 VLASQSLNNYQ--ENHVRWSQSPDSHTFSVDLPGLRKEEIKVEIEDSIYLIIRTEATPMS 71
Query: 65 --NNKWSSFSKEFPISSNYDFNEISAKFEGGKLFIKHPK------IITPAD 107
+ +F ++F + + D ISA +E G L + PK +I P+D
Sbjct: 72 PPDQPLKTFKRKFRLPESIDMIGISAGYEDGVLTVIVPKRIMTRRLIDPSD 122
>sp|Q38806|HSP22_ARATH 22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2
SV=1
Length = 195
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 22 TEWAREDEFDTLIVNLPGFRKEQLKVQVTTSKKMRISGERPLGNNK-----------WSS 70
+W E +++++PG +K+++K++V + +R+SGER K +
Sbjct: 73 VDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGK 132
Query: 71 FSKEFPISSNYDFNEISAKFEGGKLFIKHPKI 102
F ++F + N D + AK E G L I K+
Sbjct: 133 FWRQFKLPDNVDMESVKAKLENGVLTINLTKL 164
>sp|Q9LNW0|HS178_ARATH 17.8 kDa class I heat shock protein OS=Arabidopsis thaliana
GN=HSP17.8 PE=2 SV=1
Length = 157
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 22 TEWAREDEFDTLIVNLPGFRKEQLKVQVTTSKKMRISGERPL----GNNKW-------SS 70
+W E +LPG +KE++KV++ ++ISGER + + W
Sbjct: 50 VDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQ 109
Query: 71 FSKEFPISSNYDFNEISAKFEGGKLFIKHPKI 102
FS++F + N +++ A E G L + PK+
Sbjct: 110 FSRKFKLPENVKMDQVKASMENGVLTVTVPKV 141
>sp|Q9XIE3|HS17A_ARATH 17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana
GN=HSP17.6A PE=1 SV=1
Length = 155
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 22 TEWAREDEFDTLIVNLPGFRKEQLKVQVTTSKKMRISGERPL----GNNKW-------SS 70
+W E +LPG +KE++KV++ ++ISGER + + W
Sbjct: 48 VDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGG 107
Query: 71 FSKEFPISSNYDFNEISAKFEGGKLFIKHPKIIT 104
FS++F + N +++ A E G L + PK+ T
Sbjct: 108 FSRKFRLPENVKMDQVKASMENGVLTVTVPKVET 141
>sp|P04793|HSP13_SOYBN 17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M
PE=3 SV=1
Length = 153
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 18/109 (16%)
Query: 22 TEWAREDEFDTLIVNLPGFRKEQLKVQVTTSKKMRISGERPL----GNNKW-------SS 70
+W E ++PG +KE++KVQ+ + ++ISGER L N+ W +
Sbjct: 48 VDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGN 107
Query: 71 FSKEFPISSNYDFNEISAKFEGGKLFIKHPKIITPADHQQEEKPQAQAV 119
F + F + N ++ A E G L + PK ++ +KP +A+
Sbjct: 108 FMRRFRLPENAKVEQVKASMENGVLTVTVPK-------EEVKKPDVKAI 149
>sp|P04795|HSP15_SOYBN 17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L
PE=3 SV=1
Length = 154
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 11/91 (12%)
Query: 22 TEWAREDEFDTLIVNLPGFRKEQLKVQVTTSKKMRISGERPL----GNNKW-------SS 70
+W E L ++PG +KE++KVQ+ + ++ISGER + N+ W
Sbjct: 49 VDWKETQEAHVLKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVDRSSGK 108
Query: 71 FSKEFPISSNYDFNEISAKFEGGKLFIKHPK 101
F + F + N ++ A E G L + PK
Sbjct: 109 FMRRFRLPENAKVEQVKACMENGVLTVTIPK 139
>sp|P27879|HSP11_MEDSA 18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa
GN=HSP18.1 PE=2 SV=1
Length = 143
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
Query: 23 EWAREDEFDTLIVNLPGFRKEQLKVQVTTSKKMRISGERPL----GNNKW-------SSF 71
+W E +LPG +KE++KV++ + ++ISGER + N++W F
Sbjct: 39 DWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDQWHRVERSSGKF 98
Query: 72 SKEFPISSNYDFNEISAKFEGGKLFIKHPK 101
+ F + N +++ A E G L + PK
Sbjct: 99 MRRFRLPENAKMDQVKAAMENGVLTVTVPK 128
>sp|P27880|HSP12_MEDSA 18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2
PE=2 SV=1
Length = 158
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 22 TEWAREDEFDTLIVNLPGFRKEQLKVQVTTSKKMRISGERPL----GNNKW-------SS 70
+W E +LPG +KE++KV++ + ++ISGER + N++W
Sbjct: 53 VDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGK 112
Query: 71 FSKEFPISSNYDFNEISAKFEGGKLFIKHPK 101
F + F + N +++ A E G L + PK
Sbjct: 113 FMRRFRLPENAKMDQVKAAMENGVLTVTVPK 143
>sp|P05478|HSP16_SOYBN 18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C
PE=3 SV=1
Length = 161
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 18/109 (16%)
Query: 22 TEWAREDEFDTLIVNLPGFRKEQLKVQVTTSKKMRISGERPL----GNNKW-------SS 70
+W E ++PG +KE++KVQ+ K ++ISGER + N+ W
Sbjct: 56 VDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGK 115
Query: 71 FSKEFPISSNYDFNEISAKFEGGKLFIKHPKIITPADHQQEEKPQAQAV 119
F + F + N ++ A E G L + PK ++ +KP +A+
Sbjct: 116 FMRRFRLPENAKVEQVKASMENGVLTVTVPK-------EEVKKPDVKAI 157
>sp|O14368|HSP16_SCHPO Heat shock protein 16 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=hsp16 PE=2 SV=1
Length = 143
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 14/81 (17%)
Query: 35 VNLPGFRKEQLKVQVTTSKKMRISGE--------RPLGNNKWS-----SFSKEFPISSNY 81
V LPG +KE ++V S K+ ISGE GN +WS SFS+ I +
Sbjct: 52 VELPGVKKEDVQVHYD-SGKLTISGEVVNERKNESTEGNQRWSERRFGSFSRTITIPAKI 110
Query: 82 DFNEISAKFEGGKLFIKHPKI 102
D + I A F G L + PK+
Sbjct: 111 DADRIEANFSNGLLTVTLPKV 131
>sp|P29830|HS176_ARATH 17.6 kDa class II heat shock protein OS=Arabidopsis thaliana
GN=HSP17.6 PE=2 SV=1
Length = 155
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 12/75 (16%)
Query: 33 LIVNLPGFRKEQLKVQVTTSKKMRISGERPLGN------------NKWSSFSKEFPISSN 80
+V++PG + +++KVQV + +SGER N + F ++F + N
Sbjct: 58 FVVDMPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPEN 117
Query: 81 YDFNEISAKFEGGKL 95
D ++ISA G L
Sbjct: 118 ADLDKISAVCHDGVL 132
>sp|Q943Q3|HS166_ORYSJ 16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica
GN=HSP16.6 PE=2 SV=1
Length = 150
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 21/112 (18%)
Query: 22 TEWAREDEFDTLIVNLPGFRKEQLKVQVTTSKKMRISGERPL-----GNN--KW------ 68
+W +LPG RK+Q KV+V + ISGER G N +W
Sbjct: 42 VDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERS 101
Query: 69 -SSFSKEFPISSNYDFNEISAKFEGGKLFIKHPKIITPADHQQEEKPQAQAV 119
F + F + +++SA + G L + PK ++ +KPQ +A+
Sbjct: 102 SGKFQRRFRLPRGARVDQVSASMDNGVLTVTVPK-------EETKKPQLKAI 146
>sp|Q84J50|HS177_ORYSJ 17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica
GN=HSP17.7 PE=2 SV=1
Length = 159
Score = 38.1 bits (87), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 11/91 (12%)
Query: 22 TEWAREDEFDTLIVNLPGFRKEQLKVQVTTSKKMRISGERPL----GNNKW-------SS 70
+W E ++PG +KE++KV+V ++ISGER ++KW
Sbjct: 54 IDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGK 113
Query: 71 FSKEFPISSNYDFNEISAKFEGGKLFIKHPK 101
F + F + N +I A E G L + PK
Sbjct: 114 FLRRFRLPENTKPEQIKASMENGVLTVTVPK 144
>sp|P02519|HSP11_SOYBN 17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B
PE=3 SV=1
Length = 153
Score = 38.1 bits (87), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 18/109 (16%)
Query: 22 TEWAREDEFDTLIVNLPGFRKEQLKVQVTTSKKMRISGERPL----GNNKW-------SS 70
+W E ++PG +KE++K+++ + ++ISGER + N+ W
Sbjct: 48 VDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGK 107
Query: 71 FSKEFPISSNYDFNEISAKFEGGKLFIKHPKIITPADHQQEEKPQAQAV 119
+ F + N +++ A E G L + PK ++ +KP +A+
Sbjct: 108 LVRRFRLPENAKVDQVKASMENGVLTVTVPK-------EEIKKPDVKAI 149
>sp|Q84Q77|HS17A_ORYSJ 17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica
GN=HSP17.9A PE=2 SV=1
Length = 161
Score = 36.2 bits (82), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 23 EWAREDEFDTLIVNLPGFRKEQLKVQVTTSKKMRISGER----PLGNNKW-------SSF 71
+W E ++PG +KE++KV+V ++ISGER ++W F
Sbjct: 57 DWKETPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKF 116
Query: 72 SKEFPISSNYDFNEISAKFEGGKLFIKHPK 101
+ F + N +I A E G L + PK
Sbjct: 117 LRRFRLPDNAKPEQIKASMENGVLTVTVPK 146
>sp|P19037|HS181_ARATH 18.1 kDa class I heat shock protein OS=Arabidopsis thaliana
GN=HSP18.1 PE=2 SV=1
Length = 161
Score = 34.7 bits (78), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 19/126 (15%)
Query: 6 LAAAQTNREYEKFEPS-TEWAREDEFDTLIVNLPGFRKEQLKVQVTTSKKMRISGERPL- 63
LA A T R+ F + +W E +LPG +KE++KV+V ++ISGER
Sbjct: 37 LANASTARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKE 96
Query: 64 ---GNNKW-------SSFSKEFPISSNYDFNEISAKFEGGKLFIKHPKIITPADHQQEEK 113
N+KW F + F + N E+ A E G L + PK E+K
Sbjct: 97 NEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPK-------APEKK 149
Query: 114 PQAQAV 119
PQ +++
Sbjct: 150 PQVKSI 155
>sp|P30693|HSP11_HELAN 17.6 kDa class I heat shock protein OS=Helianthus annuus GN=HSP17.6
PE=2 SV=1
Length = 153
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 17/108 (15%)
Query: 23 EWAREDEFDTLIVNLPGFRKEQLKVQVTTSKKMRISGERPL----GNNKW-------SSF 71
+W E L +LPG +KE++KV+V + ++ISGER ++ W F
Sbjct: 48 DWKETPEAHVLKADLPGMKKEEVKVEVEDGRVLQISGERCREQEEKDDTWHRVERSSGKF 107
Query: 72 SKEFPISSNYDFNEISAKFEGGKLFIKHPKIITPADHQQEEKPQAQAV 119
+ F + N +E+ A E G L + PK ++E+KP +A+
Sbjct: 108 IRRFRLPENAKMDEVKAMMENGVLTVVVPK------EEEEKKPMVKAI 149
>sp|P30221|HSP11_SOLLC 17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2
SV=1
Length = 154
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 18/108 (16%)
Query: 23 EWAREDEFDTLIVNLPGFRKEQLKVQVTTSKKMRISGERPL----GNNKW-------SSF 71
+W E V+LPG +KE++KV+V + ++ISGER + N+KW F
Sbjct: 50 DWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKF 109
Query: 72 SKEFPISSNYDFNEISAKFEGGKLFIKHPKIITPADHQQEEKPQAQAV 119
+ F + N +++ A E G L + PK ++ +KP+ +++
Sbjct: 110 MRRFRLPENAKMDQVKASMENGVLTVTVPK-------EEVKKPEVKSI 150
>sp|Q38931|FKB62_ARATH Peptidyl-prolyl cis-trans isomerase FKBP62 OS=Arabidopsis thaliana
GN=FKBP62 PE=1 SV=2
Length = 551
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 61/134 (45%), Gaps = 17/134 (12%)
Query: 153 ISPPSAAGTNGPEKSGKVDRPRKSTIAEKQSSRKANNNEEAKAASVEAKITATQKNKHLA 212
I P A G+N ++ V P ST+ + + E+ + E KI A K K
Sbjct: 349 IDPEYAFGSNESQQELAV-VPPNSTVTYEVDLLTFDKERESWDMNTEEKIEAASKKK--- 404
Query: 213 EEVKS------TSGARETVEKDKKVVDYDAAASAEAGKEA-----AGSLNERASKYRTED 261
EE S S A + EK K ++YD + S E K+A A +LN+ A K + +D
Sbjct: 405 EEGNSKFKGGKYSLASKRYEKAVKFIEYDTSFSEEEKKQAKALKVACNLNDAACKLKLKD 464
Query: 262 LKQA--LGGWVMEL 273
KQA L V+EL
Sbjct: 465 YKQAEKLCTKVLEL 478
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.306 0.123 0.333
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,560,816
Number of Sequences: 539616
Number of extensions: 4521498
Number of successful extensions: 21664
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 845
Number of HSP's that attempted gapping in prelim test: 19875
Number of HSP's gapped (non-prelim): 2290
length of query: 308
length of database: 191,569,459
effective HSP length: 117
effective length of query: 191
effective length of database: 128,434,387
effective search space: 24530967917
effective search space used: 24530967917
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 61 (28.1 bits)