Your job contains 1 sequence.
>021719
MEESASTVRRWEDLDNDILVKIFQSFDIFELTSGIAHVCSSWRSACCDPLLWKTLDLSML
ISNYIKIPLEPYVYVHGHSDKQLTRILKISLSLSRGSIRTLIFHFNLYVSDDQLTYTAER
CPQLKRLVMPAWNRIKKTGICKAIRMWRDLESLTMPSIANPPYLMEEIAQNCRNFRELKI
MGPFDLLFASTLNMYLPKLKVLSLRCTTLNRDALILILDGLQNLEVLNISHCLLIDVPLA
PAPKKIIKKLDRTILQKAARLRKFLTCMEDSCIMCQRTKNDEGIMRWYKYEEGLWKDDEV
LPAIVLCI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021719
(308 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2099443 - symbol:AT3G48880 "AT3G48880" species... 1106 4.6e-112 1
TAIR|locus:2139697 - symbol:AT4G11580 species:3702 "Arabi... 239 3.5e-20 1
TAIR|locus:1005716270 - symbol:AT4G05497 "AT4G05497" spec... 162 2.9e-10 1
TAIR|locus:2174398 - symbol:SKIP1 "SKP1 interacting partn... 159 2.1e-09 1
TAIR|locus:2115979 - symbol:AT4G05490 "AT4G05490" species... 159 2.3e-09 1
TAIR|locus:2122308 - symbol:FBW2 "AT4G08980" species:3702... 153 1.3e-08 1
TAIR|locus:2115949 - symbol:AT4G05460 "AT4G05460" species... 145 9.8e-08 1
UNIPROTKB|Q58DG6 - symbol:FBXL20 "F-box/LRR-repeat protei... 113 1.4e-05 2
UNIPROTKB|Q96IG2 - symbol:FBXL20 "F-box/LRR-repeat protei... 113 1.4e-05 2
MGI|MGI:1919444 - symbol:Fbxl20 "F-box and leucine-rich r... 113 1.4e-05 2
ZFIN|ZDB-GENE-040426-2440 - symbol:fbxl15 "F-box and leuc... 114 0.00040 1
TAIR|locus:2027082 - symbol:SKP2A species:3702 "Arabidops... 115 0.00041 1
UNIPROTKB|E6ZHJ8 - symbol:fbxl15 "F-box/LRR-repeat protei... 113 0.00046 1
UNIPROTKB|Q5XGC0 - symbol:fbxl15 "F-box/LRR-repeat protei... 112 0.00060 1
>TAIR|locus:2099443 [details] [associations]
symbol:AT3G48880 "AT3G48880" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 PROSITE:PS50181 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF81383 EMBL:AL132963
EMBL:AY045976 EMBL:AY079352 EMBL:AY088907 IPI:IPI00535938
PIR:T49284 RefSeq:NP_190457.1 RefSeq:NP_850671.1 UniGene:At.1388
ProteinModelPortal:Q9M2Z5 SMR:Q9M2Z5 IntAct:Q9M2Z5 PRIDE:Q9M2Z5
EnsemblPlants:AT3G48880.1 EnsemblPlants:AT3G48880.2 GeneID:824049
KEGG:ath:AT3G48880 TAIR:At3g48880 eggNOG:NOG293773
HOGENOM:HOG000071014 InParanoid:Q9M2Z5 OMA:LPAWNRI PhylomeDB:Q9M2Z5
ProtClustDB:CLSN2684218 Genevestigator:Q9M2Z5 Uniprot:Q9M2Z5
Length = 309
Score = 1106 (394.4 bits), Expect = 4.6e-112, P = 4.6e-112
Identities = 204/304 (67%), Positives = 252/304 (82%)
Query: 1 MEESAST--VRRWEDLDNDILVKIFQSFDIFELTSGIAHVCSSWRSACCDPLLWKTLDLS 58
MEE + +RRWE+LD DILV+IFQ F +FELTSG+AHVC WR+ACCDP+LWKT+DLS
Sbjct: 1 MEEEYESRRLRRWEELDTDILVRIFQKFSVFELTSGLAHVCRGWRAACCDPILWKTVDLS 60
Query: 59 MLISNYIKIPLEPYVYVHGHSDKQLTRILKISLSLSRGSIRTLIFHFNLYVSDDQLTYTA 118
+ S++IKIPLEPYVYV SD+ LTRILK+S++LS GS RTLIFHFNL++SDDQLTYTA
Sbjct: 61 NMRSSFIKIPLEPYVYVERRSDEALTRILKLSMNLSGGSTRTLIFHFNLFLSDDQLTYTA 120
Query: 119 ERCPQLKRLVMPAWNRIKKTGICKAIRMWRDLESLTMPSIANPPYLMEEIAQNCRNFREL 178
ERCP L+R+V+PAWNRIKKTGICKAIR+W+DLESLTMPSIANPPYL+ EIA+NC+NF+EL
Sbjct: 121 ERCPGLRRVVLPAWNRIKKTGICKAIRIWKDLESLTMPSIANPPYLLTEIAKNCKNFKEL 180
Query: 179 KIMGPFDLLFASTLNMYLPKLKVLSLRCTTLNRDALILILDGLQNLEVLNISHCLLIDVX 238
KIMGPF++ FA+TL LP +K LS+RC+ + R+AL+ ILDGL +LEVLNISH L++
Sbjct: 181 KIMGPFEVFFANTLITCLPNIKTLSIRCSAIKREALMKILDGLPSLEVLNISHSHLVEYS 240
Query: 239 XXX-XXXXXXXXXDRTILQKAARLRKFLTCMED-SCIMCQRTKNDEGIMRWYKYEEGLWK 296
D+TI++K ARL+KFLTCM+ +C+MCQRT+NDEGI+RWYKYEEG WK
Sbjct: 241 GWQPQQKVIVRELDKTIMEKTARLKKFLTCMDHKTCVMCQRTENDEGIVRWYKYEEGDWK 300
Query: 297 DDEV 300
DEV
Sbjct: 301 VDEV 304
>TAIR|locus:2139697 [details] [associations]
symbol:AT4G11580 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] PROSITE:PS50181 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161532 EMBL:AL049500
IPI:IPI00519994 PIR:T04205 RefSeq:NP_192895.1 UniGene:At.54278
ProteinModelPortal:Q9T0C6 SMR:Q9T0C6 PaxDb:Q9T0C6 PRIDE:Q9T0C6
EnsemblPlants:AT4G11580.1 GeneID:826762 KEGG:ath:AT4G11580
TAIR:At4g11580 eggNOG:NOG303750 HOGENOM:HOG000112517
InParanoid:Q9T0C6 OMA:YIQENGL PhylomeDB:Q9T0C6
ProtClustDB:CLSN2915889 Genevestigator:Q9T0C6 Uniprot:Q9T0C6
Length = 333
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 67/248 (27%), Positives = 122/248 (49%)
Query: 57 LSMLISNYIKIPLEPYVYVHGHSDKQLTRILKISLSLSRGSIRTLIFHFNLYVSDDQLTY 116
L+ L++ I + V G S + +++IS LSR + + L F+FN Y+ ++ L +
Sbjct: 94 LTNLLTKIISRFFLDFFEVEG-SISLMNLLVEIS-KLSRMAPKNLFFNFNSYIQENGLKF 151
Query: 117 TAERCPQLKRLVMPAWNRIKKTGICKAIRMWRDLESLTMPS--IANPPYLMEEIAQNCRN 174
AE+ P +++L +P W + + A W++L++L + + + + + ++C N
Sbjct: 152 AAEKMPNIEKLALPIWCYQNEKSLRFAFSQWKNLKTLIIAHEHSFSGRFDFKAVGESCSN 211
Query: 175 FRELKIMGPFDLLFASTLNMYLPKLKVLSLRCTTLNRDALILILDGLQNLEVLNISHCLL 234
LK +G + + + YL LK LSLRC ++ A+ + GL NL +LN+SHC
Sbjct: 212 LTNLKYLGRLEEYTSREIVSYLHSLKRLSLRCFLVSSIAVYRFITGLPNLTILNVSHCK- 270
Query: 235 IDVXXXXXXXXXXXXXDRTILQKAA-RLRKFLTCMEDSCIMCQRTKNDEGIMRW-YKYEE 292
D ++ A +L KF+TC D C++C+ D R+ Y
Sbjct: 271 ---NPYDYFLPIAKSIDNYVITAATQKLEKFITCPHD-CMICK----DR--CRYSLSYLA 320
Query: 293 GLWKDDEV 300
+W++DE+
Sbjct: 321 EVWRNDEI 328
Score = 135 (52.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 51/168 (30%), Positives = 76/168 (45%)
Query: 1 MEESASTVRRWEDLDNDILVKIFQSFDIFELTSGIAHVCSSWRSACCDPLLWKTLDLSML 60
+E ++ V W DL+ DIL IF D+ ++T G + VC SW A + LW T+DL+ L
Sbjct: 4 VESTSGEVSEWADLNKDILELIFNKLDVMDITMGASRVCISWFLASHNKTLWNTVDLTNL 63
Query: 61 -------ISNYIKIPLEP-YVYVHGHSDKQ-LTRILKISLS---LSRGSIRTLIFHFNLY 108
I N+ K P + Y H K LT +L +S L + I NL
Sbjct: 64 QELDVSRIFNF-KDKERPIFFYKHPVDHKHGLTNLLTKIISRFFLDFFEVEGSISLMNLL 122
Query: 109 VSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICKAIRMWRDLESLTMP 156
V +L+ A P K L + I++ G+ A ++E L +P
Sbjct: 123 VEISKLSRMA---P--KNLFFNFNSYIQENGLKFAAEKMPNIEKLALP 165
>TAIR|locus:1005716270 [details] [associations]
symbol:AT4G05497 "AT4G05497" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002687 GenomeReviews:CT486007_GR HSSP:Q13309
HOGENOM:HOG000239019 EMBL:AF147263 IPI:IPI00516725
RefSeq:NP_849530.1 UniGene:At.54168 ProteinModelPortal:Q9S9V8
SMR:Q9S9V8 PRIDE:Q9S9V8 EnsemblPlants:AT4G05497.1 GeneID:830176
KEGG:ath:AT4G05497 TAIR:At4g05497 eggNOG:NOG252528
InParanoid:Q9S9V8 OMA:NAILEGC PhylomeDB:Q9S9V8
ProtClustDB:CLSN2918307 Genevestigator:Q9S9V8 Uniprot:Q9S9V8
Length = 246
Score = 162 (62.1 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 61/235 (25%), Positives = 103/235 (43%)
Query: 9 RRWEDLDNDILVKIFQSFDIFELTSGIAHVCSSWRSACCDPLLWKTLDLSMLISNYIKIP 68
R W +L ++ I E+ VC SWR C DP +W+ +D+ + N +
Sbjct: 19 RNWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIK-ENLVN-S 76
Query: 69 LEPYVYVHGHSDKQLTRILKISLSLSRGSIRTLIFHFNLYVSDDQLTYTAERCPQLKRLV 128
+E + YV + + ++ LS+G + L + + V+ L Y A+R L+RL
Sbjct: 77 VELF-YV-------IEPLCCRAVDLSQGGL--LEINIDYLVNTSFLNYIADRSSNLRRLG 126
Query: 129 MPAWNRIKKTGICKAIRMWRDLESL--TMPSIANPPYLMEEIAQNCRNFRELKIMGPFDL 186
+ + G+ +A LE L T S L + + Q+C N R LK+ D+
Sbjct: 127 VVDCAPVLSRGVVEAAMKLPLLEELDITYKSSIREQEL-KVVGQSCPNLRTLKLNCTGDV 185
Query: 187 L----FASTLNMYLPKLKVLSLRCTTLNRDALILILDGLQNLEVLNISHCLLIDV 237
A + +P L+ L L L+ L IL+G +L+ L + CL I++
Sbjct: 186 KCCDKVALAIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCLNINI 240
>TAIR|locus:2174398 [details] [associations]
symbol:SKIP1 "SKP1 interacting partner 1" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0007165 "signal transduction" evidence=RCA]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA]
InterPro:IPR001810 PROSITE:PS50181 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0019005 EMBL:AB013396
HOGENOM:HOG000242674 EMBL:AF263377 EMBL:AK229464 EMBL:BT026067
IPI:IPI00521503 RefSeq:NP_568870.1 UniGene:At.7657
ProteinModelPortal:Q9FDX1 SMR:Q9FDX1 IntAct:Q9FDX1 STRING:Q9FDX1
PaxDb:Q9FDX1 PRIDE:Q9FDX1 EnsemblPlants:AT5G57900.1 GeneID:835901
KEGG:ath:AT5G57900 TAIR:At5g57900 eggNOG:NOG287916
InParanoid:Q9FDX1 OMA:ERYGHWR PhylomeDB:Q9FDX1
ProtClustDB:CLSN2689687 Genevestigator:Q9FDX1 Uniprot:Q9FDX1
Length = 300
Score = 159 (61.0 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 51/182 (28%), Positives = 82/182 (45%)
Query: 1 MEESASTVRRWEDLDNDILVKIFQSFDIFELTSGIAHVCSSWRSACCDPLLWKTLDLSML 60
MEE S W L +IL+ I I EL +G V SW + C DP LW DL
Sbjct: 1 MEEDGSD---WGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPW 57
Query: 61 ISNYIKIPLEPYVYVHGHSDKQLTRILKISLSLSRGSIRTLIFHFNLYVSDDQLTYTAER 120
+Y P +++ ++++ +L+ + S G + + + SD L+Y A+R
Sbjct: 58 FDSY---PESTHLW-SPEFEQKVDLMLRSVVDWSEGGLTKIRVR---HCSDHALSYAADR 110
Query: 121 CPQLKRLVMPAWNRIKKTGICKAIRMWRDLESLTMP---SIANPPYLMEEIAQNCRNFRE 177
CP L+ L + + + + K R L+ L + I++ +M I +NC N R
Sbjct: 111 CPNLQVLAIRSSPNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVM--IGRNCPNLRI 168
Query: 178 LK 179
LK
Sbjct: 169 LK 170
>TAIR|locus:2115979 [details] [associations]
symbol:AT4G05490 "AT4G05490" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF81383 EMBL:AL161503
IPI:IPI00523303 PIR:A85069 RefSeq:NP_567296.1 UniGene:At.54167
ProteinModelPortal:Q9M0U6 SMR:Q9M0U6 STRING:Q9M0U6 PRIDE:Q9M0U6
EnsemblPlants:AT4G05490.1 GeneID:825898 KEGG:ath:AT4G05490
TAIR:At4g05490 eggNOG:NOG282057 HOGENOM:HOG000239019
InParanoid:Q9M0U6 OMA:MEACCRH PhylomeDB:Q9M0U6
Genevestigator:Q9M0U6 Uniprot:Q9M0U6
Length = 307
Score = 159 (61.0 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 64/234 (27%), Positives = 99/234 (42%)
Query: 11 WEDLDNDILVKIFQSFDIFELTSGIAHVCSSWRSACCDPLLWKTLDLSMLISNYIKIPLE 70
W +L D+L I E+ VC SWR DPL+W+ +D+ L Y
Sbjct: 27 WAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNLRRLYC----- 81
Query: 71 PYVYVHGHSDKQLTRILKISLSLSRGSIRTLIFHFNL--YVSDDQLTYTAERCPQLKRLV 128
+Y + + + LS+G + L F+ + + + L Y AER L+RL
Sbjct: 82 --IYA-------MEACCRHVVDLSQGGL--LEFNIDQWRFQTTSLLNYMAERSSNLRRLR 130
Query: 129 MPAWNRIKKTGICKAIRMWRDLESLTMPSIANPPYLMEEIAQNCRNFRELKIMGPFDLLF 188
+ +I GI +AI LE L + + + I Q C N + LK++G + L
Sbjct: 131 VKG-GQITSVGIFEAIVKLPLLEELELLYCSIEEEHFKTIGQACPNLKTLKLVGFWSHLN 189
Query: 189 ASTLNMY-----LPKLKVLSLRCTTLNRDALILILDGLQNLEVLNISHCLLIDV 237
S + +P L L L L L ILDG +LE L++ C I++
Sbjct: 190 ESDNDALAIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINL 243
>TAIR|locus:2122308 [details] [associations]
symbol:FBW2 "AT4G08980" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009737 "response
to abscisic acid stimulus" evidence=IMP] [GO:0010608
"posttranscriptional regulation of gene expression" evidence=IMP]
[GO:0010629 "negative regulation of gene expression" evidence=IMP]
PROSITE:PS50181 UniPathway:UPA00143 GO:GO:0009737 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016567 GO:GO:0010629
EMBL:AL161513 EMBL:AF128396 GO:GO:0010608 EMBL:BT002431
EMBL:BT008715 EMBL:AK317222 EMBL:AY084585 IPI:IPI00545019
PIR:F85090 RefSeq:NP_001078359.1 RefSeq:NP_001154215.1
RefSeq:NP_567343.1 RefSeq:NP_849346.1 RefSeq:NP_974523.1
UniGene:At.27697 ProteinModelPortal:Q9ZPE4 SMR:Q9ZPE4 IntAct:Q9ZPE4
STRING:Q9ZPE4 EnsemblPlants:AT4G08980.1 EnsemblPlants:AT4G08980.2
EnsemblPlants:AT4G08980.3 EnsemblPlants:AT4G08980.4
EnsemblPlants:AT4G08980.5 GeneID:826476 KEGG:ath:AT4G08980
TAIR:At4g08980 eggNOG:NOG274710 HOGENOM:HOG000239506
InParanoid:Q9ZPE4 OMA:RVCKSWS PhylomeDB:Q9ZPE4
ProtClustDB:CLSN2689382 Genevestigator:Q9ZPE4 Uniprot:Q9ZPE4
Length = 317
Score = 153 (58.9 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 57/241 (23%), Positives = 102/241 (42%)
Query: 1 MEESASTVRRWEDLDNDILVKIFQSFDIFELTSGIAHVCSSWRSACCDPLLWKTLDLSML 60
MEE R W++L D L IF + E+ + + VC +W A P W+ +D+ +
Sbjct: 1 MEEDCE-FRHWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELW 59
Query: 61 ISNYIKIPLEPYVYVHGHSDKQLTRILKISLSLSRGSIRTLIFHFNLYVSDDQLTYTAER 120
+ + H L R+L++ + S GS+R L L +D ++ A+
Sbjct: 60 SNRF-------------HQSDHLDRMLEMLIPRSAGSLRKLSVT-GLR-NDSIFSFIAQH 104
Query: 121 CPQLKRLVMPAWNRIKKTGICKAIRMWRDLESLTMPSIAN-PPYLMEEIAQNCRNFREL- 178
LK L +P + + +G+ L L + P ++ I ++C++ RE
Sbjct: 105 AGSLKTLKVPR-SGLTNSGVVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFC 163
Query: 179 KIMGPFDLLF-------ASTLNMYLPKLKVLSLRCTTLNRDALILILDGLQNLEVLNISH 231
+ M P D+ A + +PKLK L + ++ + ++ IL LE L +
Sbjct: 164 RNMHPLDVASVVSHDDEAYAIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRG 223
Query: 232 C 232
C
Sbjct: 224 C 224
>TAIR|locus:2115949 [details] [associations]
symbol:AT4G05460 "AT4G05460" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR001810 PROSITE:PS50181
SMART:SM00256 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016567 EMBL:AL161503
HOGENOM:HOG000239019 EMBL:BT003081 EMBL:AY087774 EMBL:AK227360
IPI:IPI00546408 PIR:F85068 RefSeq:NP_567294.1 UniGene:At.48830
UniGene:At.66629 ProteinModelPortal:Q9M0U9 SMR:Q9M0U9 IntAct:Q9M0U9
STRING:Q9M0U9 PaxDb:Q9M0U9 PRIDE:Q9M0U9 EnsemblPlants:AT4G05460.1
GeneID:825896 KEGG:ath:AT4G05460 TAIR:At4g05460 eggNOG:NOG251781
InParanoid:Q9M0U9 OMA:CFRLNER PhylomeDB:Q9M0U9
ProtClustDB:CLSN2917517 Genevestigator:Q9M0U9 Uniprot:Q9M0U9
Length = 302
Score = 145 (56.1 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 61/241 (25%), Positives = 101/241 (41%)
Query: 1 MEESASTVRRWEDLDNDILVKIFQSFDIFELTSGIAHVCSSWRSACCDPLLWKTLDLSML 60
ME ST W +L ++ I E+ VC SWR C DP +W+ +D+ L
Sbjct: 11 MEVGEST--NWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNL 68
Query: 61 ISNYIKIPLEPYVYVHGHSDKQLTRILKISLSLSRGSIRTL-IFHFNLYVSDDQLTYTAE 119
L+ Y L + + ++ S+G + + I++F D L Y A
Sbjct: 69 GD------LDDMDY-------NLEIMCRHAVDRSQGGLVDIGIWYFGTV---DLLNYIAH 112
Query: 120 RCPQLKRLVMPAWNRIKKTGICKAIRMWRDLESLTMPSIANPPYLMEEIAQNCRNFRELK 179
R L+ L + ++I G +A+ + LE L + + + + Q C N + LK
Sbjct: 113 RSSNLRSLRLIRCSQITDDGFVEAV-VKLPLEELELSYCSFSVESLRVVGQCCLNMKTLK 171
Query: 180 I-MGPFDLLFASTLNMY--LPKLKVLSLRCTTLNRDALILILDGLQNLEVLNISHCLLID 236
+ P L + +PKL+ L L L+ L ILD NLE L++ C ++
Sbjct: 172 LNKHPQKENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVN 231
Query: 237 V 237
+
Sbjct: 232 L 232
>UNIPROTKB|Q58DG6 [details] [associations]
symbol:FBXL20 "F-box/LRR-repeat protein 20" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0005737
SUPFAM:SSF81383 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 eggNOG:NOG300245 KO:K10268 HOGENOM:HOG000230659
HOVERGEN:HBG051586 OrthoDB:EOG4KPTB9 EMBL:BT021631 EMBL:BC133345
IPI:IPI00718197 IPI:IPI00884875 RefSeq:NP_001030268.1
UniGene:Bt.20361 ProteinModelPortal:Q58DG6 SMR:Q58DG6 PRIDE:Q58DG6
Ensembl:ENSBTAT00000011020 GeneID:511007 KEGG:bta:511007 CTD:84961
OMA:CAHDRLE NextBio:20869722 Uniprot:Q58DG6
Length = 436
Score = 113 (44.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 37/144 (25%), Positives = 61/144 (42%)
Query: 96 GSIRTLIFHFNLYVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICKAIRMWRDLESLTM 155
G ++ L + D+ L Y CP+L L + +I G+ R L+SL
Sbjct: 195 GGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCA 254
Query: 156 PSIAN-PPYLMEEIAQNCRNFRELKIMGPFDLLFA--STLNMYLPKLKVLSLR-CTTLNR 211
+N ++ + QNC R L++ L +TL +L+ + L C +
Sbjct: 255 SGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITD 314
Query: 212 DALILILDGLQNLEVLNISHCLLI 235
LI + L+VL++SHC LI
Sbjct: 315 STLIQLSIHCPRLQVLSLSHCELI 338
Score = 57 (25.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 14 LDNDILVKIFQSFDIFELTSGIAHVCSSWRSACCDPLLWKTLDL 57
L ++L++IF D+ L A V +W D W+ +DL
Sbjct: 28 LPKELLLRIFSFLDVVTLCR-CAQVSRAWNVLALDGSNWQRIDL 70
>UNIPROTKB|Q96IG2 [details] [associations]
symbol:FBXL20 "F-box/LRR-repeat protein 20" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0005737
SUPFAM:SSF81383 InterPro:IPR006553 SMART:SM00367 eggNOG:NOG300245
KO:K10268 HOGENOM:HOG000230659 HOVERGEN:HBG051586 OrthoDB:EOG4KPTB9
CTD:84961 OMA:CAHDRLE EMBL:DQ223959 EMBL:AK291844 EMBL:BC007557
IPI:IPI00174757 IPI:IPI00655936 RefSeq:NP_001171835.1
RefSeq:NP_116264.2 UniGene:Hs.462946 ProteinModelPortal:Q96IG2
SMR:Q96IG2 STRING:Q96IG2 PhosphoSite:Q96IG2 DMDM:38503141
PaxDb:Q96IG2 PRIDE:Q96IG2 DNASU:84961 Ensembl:ENST00000264658
Ensembl:ENST00000394294 Ensembl:ENST00000583610 GeneID:84961
KEGG:hsa:84961 UCSC:uc002hrt.3 UCSC:uc010cvu.3
GeneCards:GC17M037409 HGNC:HGNC:24679 MIM:609086 neXtProt:NX_Q96IG2
PharmGKB:PA134976410 InParanoid:Q96IG2 PhylomeDB:Q96IG2
GenomeRNAi:84961 NextBio:75475 Bgee:Q96IG2 CleanEx:HS_FBXL20
Genevestigator:Q96IG2 GermOnline:ENSG00000108306 Uniprot:Q96IG2
Length = 436
Score = 113 (44.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 37/144 (25%), Positives = 61/144 (42%)
Query: 96 GSIRTLIFHFNLYVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICKAIRMWRDLESLTM 155
G ++ L + D+ L Y CP+L L + +I G+ R L+SL
Sbjct: 195 GGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCA 254
Query: 156 PSIAN-PPYLMEEIAQNCRNFRELKIMGPFDLLFA--STLNMYLPKLKVLSLR-CTTLNR 211
+N ++ + QNC R L++ L +TL +L+ + L C +
Sbjct: 255 SGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITD 314
Query: 212 DALILILDGLQNLEVLNISHCLLI 235
LI + L+VL++SHC LI
Sbjct: 315 STLIQLSIHCPRLQVLSLSHCELI 338
Score = 57 (25.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 14 LDNDILVKIFQSFDIFELTSGIAHVCSSWRSACCDPLLWKTLDL 57
L ++L++IF D+ L A V +W D W+ +DL
Sbjct: 28 LPKELLLRIFSFLDVVTLCR-CAQVSRAWNVLALDGSNWQRIDL 70
>MGI|MGI:1919444 [details] [associations]
symbol:Fbxl20 "F-box and leucine-rich repeat protein 20"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 MGI:MGI:1919444 GO:GO:0005737
SUPFAM:SSF81383 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 EMBL:AL591209 EMBL:AL591205 eggNOG:NOG300245
KO:K10268 HOGENOM:HOG000230659 HOVERGEN:HBG051586 OrthoDB:EOG4KPTB9
CTD:84961 OMA:CAHDRLE EMBL:EF649694 EMBL:AK012109 EMBL:AK036217
EMBL:AK144786 EMBL:AK220232 IPI:IPI00605645 IPI:IPI00874641
IPI:IPI00954305 RefSeq:NP_082425.1 UniGene:Mm.218350
ProteinModelPortal:Q9CZV8 SMR:Q9CZV8 IntAct:Q9CZV8 STRING:Q9CZV8
PhosphoSite:Q9CZV8 PaxDb:Q9CZV8 PRIDE:Q9CZV8
Ensembl:ENSMUST00000103143 GeneID:72194 KEGG:mmu:72194
UCSC:uc007lfm.1 UCSC:uc009vah.1 InParanoid:Q9CZV8 NextBio:335667
Bgee:Q9CZV8 CleanEx:MM_FBXL20 Genevestigator:Q9CZV8
GermOnline:ENSMUSG00000020883 Uniprot:Q9CZV8
Length = 436
Score = 113 (44.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 37/144 (25%), Positives = 61/144 (42%)
Query: 96 GSIRTLIFHFNLYVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICKAIRMWRDLESLTM 155
G ++ L + D+ L Y CP+L L + +I G+ R L+SL
Sbjct: 195 GGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCA 254
Query: 156 PSIAN-PPYLMEEIAQNCRNFRELKIMGPFDLLFA--STLNMYLPKLKVLSLR-CTTLNR 211
+N ++ + QNC R L++ L +TL +L+ + L C +
Sbjct: 255 SGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITD 314
Query: 212 DALILILDGLQNLEVLNISHCLLI 235
LI + L+VL++SHC LI
Sbjct: 315 STLIQLSIHCPRLQVLSLSHCELI 338
Score = 57 (25.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 14 LDNDILVKIFQSFDIFELTSGIAHVCSSWRSACCDPLLWKTLDL 57
L ++L++IF D+ L A V +W D W+ +DL
Sbjct: 28 LPKELLLRIFSFLDVVTLCR-CAQVSRAWNVLALDGSNWQRIDL 70
>ZFIN|ZDB-GENE-040426-2440 [details] [associations]
symbol:fbxl15 "F-box and leucine-rich repeat
protein 15" species:7955 "Danio rerio" [GO:0000086 "G2/M transition
of mitotic cell cycle" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISS] [GO:0030282 "bone
mineralization" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0030513 "positive regulation of BMP
signaling pathway" evidence=ISS] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IMP] InterPro:IPR001810 Pfam:PF00646
ZFIN:ZDB-GENE-040426-2440 GO:GO:0009953
GeneTree:ENSGT00700000104313 EMBL:CU469585
Ensembl:ENSDART00000124455 Bgee:H9KUW9 Uniprot:H9KUW9
Length = 310
Score = 114 (45.2 bits), Expect = 0.00040, P = 0.00040
Identities = 37/137 (27%), Positives = 64/137 (46%)
Query: 82 QLTRILKISLSLSRGSIRTLIFHFNLYVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGIC 141
QL+R +++SLS ++ L +V L A+ CP L+ L + A ++K +C
Sbjct: 137 QLSRRALVAVSLSCPRLQHLSLAHCEWVDSLALRSLADHCPMLRSLDLTACRQLKDPAVC 196
Query: 142 KAIRMWRDLESLTMPSIAN-PPYLMEEIAQNCRNFRELKIMGPFDLLFAS--TLNMYLPK 198
+L +L++ AN +EE+A+ CR L + G + + TL Y PK
Sbjct: 197 YLAGKCPELRALSVAVNANITDTAVEEVAKKCREMERLDLTGCLRVRNEAIRTLAEYCPK 256
Query: 199 LKVLSLR-CTTLNRDAL 214
L+ L + C + +L
Sbjct: 257 LQSLKVNHCHNVTESSL 273
>TAIR|locus:2027082 [details] [associations]
symbol:SKP2A species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA;IPI] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA;IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0051781 "positive regulation of cell
division" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0071365 "cellular response to auxin stimulus"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR001810 Pfam:PF00646
PROSITE:PS50181 SMART:SM00256 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0051781
SUPFAM:SSF81383 GO:GO:0010311 EMBL:AC015447 GO:GO:0019005
GO:GO:0071365 GO:GO:0004842 InterPro:IPR006553 SMART:SM00367
GO:GO:0031146 KO:K10268 EMBL:AY058081 EMBL:AY090308 EMBL:AY085898
IPI:IPI00519620 PIR:B86347 RefSeq:NP_564139.1 UniGene:At.25230
ProteinModelPortal:Q9LPL4 SMR:Q9LPL4 IntAct:Q9LPL4 STRING:Q9LPL4
EnsemblPlants:AT1G21410.1 GeneID:838740 KEGG:ath:AT1G21410
TAIR:At1g21410 eggNOG:NOG257455 HOGENOM:HOG000238537
InParanoid:Q9LPL4 OMA:NLNISQC PhylomeDB:Q9LPL4
ProtClustDB:CLSN2687892 Genevestigator:Q9LPL4 Uniprot:Q9LPL4
Length = 360
Score = 115 (45.5 bits), Expect = 0.00041, P = 0.00041
Identities = 52/242 (21%), Positives = 99/242 (40%)
Query: 1 MEESASTVRRWEDLDNDILVKIFQSFDIFELTSGIAHVCSSWRSACCDPLLWKTLDLSML 60
M+ +++ W+D+ ++L++I D + + VC+ WR A L L
Sbjct: 18 MKMEGISIKEWKDIPVELLMRILSLVDDRNVIVA-SGVCTGWRDAISFGLTRLRLSWCNN 76
Query: 61 ISNYIKIPLEP-YVYVHG---HSDK-QLTRILKISLSLSRGSIRTLIFHFNLYVSDDQLT 115
N + + L P +V + DK QL +++ ++ L +L ++D L
Sbjct: 77 NMNSLVLSLVPKFVKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKSLKITDRSLY 136
Query: 116 YTAERCPQLKRLVMPAWNRIKKTGICKAIRMWRDLESLTMPSI--ANPPYLMEEIAQNCR 173
A CP L +L + T I R R L+ L + A +E I NC
Sbjct: 137 ALAHGCPDLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNNCN 196
Query: 174 NFRELKIMGPFDLLFASTLNM-Y-LPKLKVLSL-RCTTLNRDALILILDGLQNLEVLNIS 230
+ L + ++ +++ Y P L+ L L C + ++++ + D +L L +
Sbjct: 197 QMQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCVLITDESVVALADWCVHLRSLGLY 256
Query: 231 HC 232
+C
Sbjct: 257 YC 258
>UNIPROTKB|E6ZHJ8 [details] [associations]
symbol:fbxl15 "F-box/LRR-repeat protein 15" species:13489
"Dicentrarchus labrax" [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=ISS] [GO:0030282 "bone
mineralization" evidence=ISS] [GO:0030513 "positive regulation of
BMP signaling pathway" evidence=ISS] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
PROSITE:PS51450 UniPathway:UPA00143 GO:GO:0005737 GO:GO:0000086
GO:GO:0016567 GO:GO:0030513 GO:GO:0019005 GO:GO:0009953
GO:GO:0030282 GO:GO:0031146 EMBL:FQ310507 Uniprot:E6ZHJ8
Length = 292
Score = 113 (44.8 bits), Expect = 0.00046, P = 0.00046
Identities = 40/137 (29%), Positives = 66/137 (48%)
Query: 83 LTRILKISLSLSRGSIRTL-IFHFNLYVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGIC 141
LTR +++SLS ++ L + H +V L A+ C L+ + + A ++K IC
Sbjct: 120 LTRHSLVAVSLSCMHLQHLGLAHCE-WVDSLSLRSLADHCGGLQSIDLTACRQLKDDAIC 178
Query: 142 KAIRMWRDLESLTMPSIAN-PPYLMEEIAQNCRNFRELKIMGPFDLLFAS--TLNMYLPK 198
+ L SL++ AN +EE+A+NCR +L + G + S TL Y PK
Sbjct: 179 YLAKKCLKLRSLSLAVNANITDESVEEVAKNCRGLEQLDLTGCLRVRNQSIRTLAEYCPK 238
Query: 199 LKVLSLR-CTTLNRDAL 214
L+ L + C + +L
Sbjct: 239 LQSLKVNHCHNVTESSL 255
>UNIPROTKB|Q5XGC0 [details] [associations]
symbol:fbxl15 "F-box/LRR-repeat protein 15" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0009953 "dorsal/ventral pattern formation"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0030282 "bone mineralization" evidence=ISS] [GO:0030513
"positive regulation of BMP signaling pathway" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] InterPro:IPR001810 Pfam:PF00646
PROSITE:PS50181 PROSITE:PS51450 UniPathway:UPA00143 GO:GO:0005737
GO:GO:0000086 GO:GO:0016567 GO:GO:0030513 GO:GO:0019005
GO:GO:0009953 GO:GO:0030282 GO:GO:0031146
GeneTree:ENSGT00700000104313 KO:K10281 CTD:79176 eggNOG:NOG314825
HOVERGEN:HBG051578 OrthoDB:EOG47PX6H EMBL:CR762261 EMBL:BC084522
RefSeq:NP_001011123.1 UniGene:Str.20389 ProteinModelPortal:Q5XGC0
Ensembl:ENSXETT00000031072 GeneID:496536 KEGG:xtr:496536
Xenbase:XB-GENE-973058 HOGENOM:HOG000112544 InParanoid:Q5XGC0
OMA:NERCISV Bgee:Q5XGC0 Uniprot:Q5XGC0
Length = 292
Score = 112 (44.5 bits), Expect = 0.00060, P = 0.00060
Identities = 46/174 (26%), Positives = 82/174 (47%)
Query: 45 ACCDPLLWKTLDLSMLISNYIKIPLEPYVYVHGHSDKQLTRILKISLSLSRGSIRTLIFH 104
+CCD L K L L ++ N+ ++++ +S QLTR +++SLS ++ +
Sbjct: 89 SCCDWLTDKEL-LPVIGQNH------HLIHINLNSCGQLTRQSLVAISLSCPHLQNICLG 141
Query: 105 FNLYVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICKAIRMWRDLESLTMPSIAN-PPY 163
+V L + C L+ + + A ++K I ++ L+SL++ AN
Sbjct: 142 HCEWVDCLSLRSLVDHCKCLEAIDLTACRQLKDDTISYLVQKSTRLKSLSLAVNANISDI 201
Query: 164 LMEEIAQNCRNFRELKIMGPFDLLFAS--TLNMYLPKLKVLSLR-CTTLNRDAL 214
+EE A+NCR+ L + G + S TL Y KLK L ++ C + +L
Sbjct: 202 AVEETAKNCRDLEHLDLTGCLRVKNDSIRTLAEYCTKLKSLKVKHCHNVTESSL 255
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.139 0.435 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 308 295 0.00092 115 3 11 22 0.44 33
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 622 (66 KB)
Total size of DFA: 237 KB (2127 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.60u 0.10s 22.70t Elapsed: 00:00:01
Total cpu time: 22.60u 0.10s 22.70t Elapsed: 00:00:01
Start: Fri May 10 08:44:36 2013 End: Fri May 10 08:44:37 2013