Your job contains 1 sequence.
>021722
MEILAIHLQPLLLKRTMSAKEVRASDVRPLPVLEETLNYLLSLLDSTEHPFEVIHDFVFD
RTRSVRQDLIMQNIVNDKAINMFEKIVKFHVISHHKLRSSCSSSSISPLHYLNLEQLTKA
LTSLYNLYEANRSSKPIHEKEAEFRSFYVLLHLDSNGQPVGESLSLWFRHVPSPIIKSKE
MWFARQALRYFQMGNYRRFLSTVAAEASYLQYCIIEPYIDEVRSLALCCIHNCCYKLHPY
PLGHLSKVLMMEESDVELFCNAYGLQTCIDEVGNKLLPTKQTTFCRPKGGLQNYSFLGFQ
QLGRQIEL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021722
(308 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2096189 - symbol:SAC3C "AT3G54380" species:370... 771 1.5e-76 1
TAIR|locus:2082485 - symbol:SAC3B "AT3G06290" species:370... 302 2.8e-25 1
UNIPROTKB|F1NVG3 - symbol:MCM3AP "Uncharacterized protein... 237 2.3e-18 1
ZFIN|ZDB-GENE-040715-1 - symbol:mcm3ap "MCM3 minichromoso... 226 4.5e-17 1
MGI|MGI:1930089 - symbol:Mcm3ap "minichromosome maintenan... 219 2.3e-16 1
RGD|1306834 - symbol:Mcm3ap "minichromosome maintenance c... 216 4.6e-16 1
UNIPROTKB|E1BJE7 - symbol:MCM3AP "Uncharacterized protein... 215 6.2e-16 1
UNIPROTKB|I3LCF4 - symbol:MCM3AP "Uncharacterized protein... 215 6.2e-16 1
UNIPROTKB|O60318 - symbol:MCM3AP "80 kDa MCM3-associated ... 210 2.1e-15 1
POMBASE|SPCC70.06 - symbol:SPCC70.06 "nuclear export fact... 157 8.2e-14 2
WB|WBGene00017642 - symbol:F20D12.2 species:6239 "Caenorh... 201 9.4e-14 1
FB|FBgn0028974 - symbol:xmas-2 "xmas-2" species:7227 "Dro... 200 1.7e-13 1
POMBASE|SPCC576.05 - symbol:sac3 "nuclear export factor S... 198 2.4e-13 1
CGD|CAL0005530 - symbol:SAC3 species:5476 "Candida albica... 187 9.5e-12 1
UNIPROTKB|Q5ALM2 - symbol:SAC3 "Putative uncharacterized ... 187 9.5e-12 1
ASPGD|ASPL0000066715 - symbol:sac3 species:162425 "Emeric... 175 2.8e-10 1
SGD|S000002566 - symbol:SAC3 "Nuclear pore-associated pro... 163 7.9e-09 1
RGD|1308049 - symbol:Sac3d1 "SAC3 domain containing 1" sp... 117 0.00029 1
>TAIR|locus:2096189 [details] [associations]
symbol:SAC3C "AT3G54380" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0048573
"photoperiodism, flowering" evidence=RCA] Pfam:PF03399
EMBL:CP002686 InterPro:IPR005062 eggNOG:COG5079 EMBL:AK176716
IPI:IPI00547475 RefSeq:NP_851016.1 UniGene:At.19294
ProteinModelPortal:Q67XV2 SMR:Q67XV2 STRING:Q67XV2
EnsemblPlants:AT3G54380.1 GeneID:824604 KEGG:ath:AT3G54380
TAIR:At3g54380 InParanoid:Q67XV2 OMA:KFHVISH PhylomeDB:Q67XV2
ProtClustDB:CLSN2680405 ArrayExpress:Q67XV2 Genevestigator:Q67XV2
Uniprot:Q67XV2
Length = 406
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 149/292 (51%), Positives = 200/292 (68%)
Query: 15 RTMSAKEVRASDVRPLPVXXXXXXXXXXXXXXXXHPFEVIHDFVFDRTRSVRQDLIMQNI 74
RT+SA +V+ASDVRPLPV HPFEV+HDF+FDRTRS+RQDL +QN+
Sbjct: 116 RTLSAADVQASDVRPLPVLEETLRYLLSLLDSKEHPFEVVHDFIFDRTRSIRQDLSIQNL 175
Query: 75 VNDKAINMFEKIVKFHVISHHKLRXXXXXXXXXPLHYLNLEQLTKALTSLYNLYEANRSS 134
N++ I ++E++VKFHVISH +L+ +H+LN+EQL K LTSLYN+Y+ANR
Sbjct: 176 ANERVIYLYEEMVKFHVISHERLQSCSGTSISS-MHHLNMEQLAKTLTSLYNIYDANRKP 234
Query: 135 KPIHEKEAEFRSFYVLLHLDSNGQPVGESLSLWFRHVPSPIIKSKEMWFARQALRYFQMG 194
I+E EAEFRS YVLLHL+ + +GE LSLWFR + ++KSKE+ F R LR ++MG
Sbjct: 235 DYIYENEAEFRSLYVLLHLNPSSGVMGEPLSLWFRKLTFALVKSKEICFVRNLLRLYRMG 294
Query: 195 NYRRFLSTVAAEASYLQYCIIEPYIDEVRSLALCCIHNCCYKLHPYPLGHLSKVLMMEES 254
NY+ FLS A+EA+YLQYCI E +I E+R +A+ I+N CYKL PYPL LS+ L M+E
Sbjct: 295 NYKNFLSRTASEATYLQYCISEHHIREMRLVAVQYINNVCYKLQPYPLLRLSQNLKMKEL 354
Query: 255 DVELFCNAYGLQTCIDEVGNKLLPTKQTTFCRPKGGLQNYSFLGFQQLGRQI 306
DVE C+ GL+TC D G +LP KQ+TF P+ + Y +G +++ I
Sbjct: 355 DVESLCHECGLETCTDPDGFTVLPVKQSTFRSPEDKFKVYDLIGIERIKMSI 406
>TAIR|locus:2082485 [details] [associations]
symbol:SAC3B "AT3G06290" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0034399 "nuclear periphery" evidence=IDA]
Pfam:PF03399 EMBL:CP002686 GO:GO:0034399 InterPro:IPR005062
IPI:IPI01020080 RefSeq:NP_187280.3 UniGene:At.27787 PRIDE:F4JAU2
EnsemblPlants:AT3G06290.1 GeneID:819803 KEGG:ath:AT3G06290
OMA:DHNISKR Uniprot:F4JAU2
Length = 1697
Score = 302 (111.4 bits), Expect = 2.8e-25, P = 2.8e-25
Identities = 78/266 (29%), Positives = 133/266 (50%)
Query: 11 LLLKRTMSAKEVRASDVRPLPVXXXXXXXXXXXXXXXXHP-FEVIHDFVFDRTRSVRQDL 69
L +K+ E A +RP+P+ + F +++F++DR R++R DL
Sbjct: 520 LAVKKYTRTAEREAILIRPMPILQNTMEYLLSLLDRPYNENFLGMYNFLWDRMRAIRMDL 579
Query: 70 IMQNIVNDKAINMFEKIVKFHVISHHKLRXXXXXXXXXPLH--YLNLEQLTKALTSLYNL 127
MQ+I N +AI + E++++ H+I+ H+L +LN+EQ+ K L+ +
Sbjct: 580 RMQHIFNQEAITLLEQMIRLHIIAMHELCEYTKGEGFSEGFDAHLNIEQMNKTSVELFQM 639
Query: 128 YEANRSSKPIHEKEAEFRSFYVLLHLDSN-GQPVGES-LSLWFRHVPSPIIKSKEMWFAR 185
Y+ +R E EFR +Y LL LD + G V S LSL ++ I ++ E+ FAR
Sbjct: 640 YDDHRKKGITVPTEKEFRGYYALLKLDKHPGYKVEPSELSLDLANMTPEIRQTSEVLFAR 699
Query: 186 QALRYFQMGNYRRFLSTVAAEASYLQYCIIEPYIDEVRSLALCCIHNCCYKLHPYPLGHL 245
R + GN+ F +A +ASYLQ C++ + ++R+ AL +H+ P+ +
Sbjct: 700 NVARACRTGNFIAFFR-LARKASYLQACLMHAHFSKLRTQALASLHSGLQINQGLPVSDM 758
Query: 246 SKVLMMEESDVELFCNAYGLQTCIDE 271
S + MEE D+E +G + E
Sbjct: 759 SNWIGMEEEDIEALLEYHGFSIKVFE 784
>UNIPROTKB|F1NVG3 [details] [associations]
symbol:MCM3AP "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR012677 Pfam:PF03399 GO:GO:0005829
GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 InterPro:IPR005062
OMA:AHQMKVQ GeneTree:ENSGT00530000063781 EMBL:AADN02034402
IPI:IPI00574429 Ensembl:ENSGALT00000006957 Uniprot:F1NVG3
Length = 1659
Score = 237 (88.5 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 70/219 (31%), Positives = 114/219 (52%)
Query: 55 HDFVFDRTRSVRQDLIMQNIVNDKAINMFEKIVKFHV-ISHHKLRXXXXXXXXXPLHYLN 113
+DFV++RTR +R+D+ Q++ N +++ EK +FH+ +HH +N
Sbjct: 402 YDFVWNRTRGIRKDITQQHLCNPLMVSLIEKCTRFHIHCAHHLCEEPMSSFDAK----IN 457
Query: 114 LEQLTKALTSLYNLYEANRSSKPIHEK-EAEFRSFYVLLHLDSNGQPVGESLSLWFRHVP 172
E +TK L SL +Y+ + ++K I+ K EAEFR + VLL+L+ G+ L + P
Sbjct: 458 NENMTKCLQSLKEMYQ-DLANKGIYCKSEAEFRGYNVLLNLNK-----GDILREVQQFHP 511
Query: 173 SPIIKSKEMWFARQALRYFQMGNYRRFLSTVAAEASYLQYCIIEPYIDEVRSLALCCIHN 232
+ S E+ FA QA N+ RF V A ASYL C++ Y +++R AL + N
Sbjct: 512 E-VRNSPEVRFAVQAFAALNSNNFVRFFKLVQA-ASYLNACLLHCYFNQIRKDALKSL-N 568
Query: 233 CCYKLHP-----YPLGHLSKVLMMEESDVEL-FCNAYGL 265
Y + +PL HL +L+ ++ + F + YGL
Sbjct: 569 IAYTVSTQRCTAFPLDHLVHMLLFKDCEEATDFISYYGL 607
>ZFIN|ZDB-GENE-040715-1 [details] [associations]
symbol:mcm3ap "MCM3 minichromosome maintenance
deficient 3 (S. cerevisiae) associated protein" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
Pfam:PF03399 ZFIN:ZDB-GENE-040715-1 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR005062
GeneTree:ENSGT00530000063781 EMBL:BX255930 EMBL:BX001051
IPI:IPI00608713 Ensembl:ENSDART00000008053 Bgee:F1Q712
Uniprot:F1Q712
Length = 2118
Score = 226 (84.6 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 67/219 (30%), Positives = 114/219 (52%)
Query: 55 HDFVFDRTRSVRQDLIMQNIVNDKAINMFEKIVKFHV-ISHHKLRXXXXXXXXXPLHYLN 113
+DFV++RTR +R+D+ Q++ + + +++ EK +FH+ +HH + +N
Sbjct: 772 YDFVWNRTRGIRKDITQQHLCDPETVSLIEKCTRFHIHCAHHLCQEPMMSFDAK----IN 827
Query: 114 LEQLTKALTSLYNLYEANRSSKPIH-EKEAEFRSFYVLLHLDSNGQPVGESLSLWFRHVP 172
E +TK L SL +Y+ + ++K ++ KEAEFR + VL+ L+ +G + E FR
Sbjct: 828 NENMTKCLQSLKEMYQ-DLATKEVYCPKEAEFRQYNVLVKLN-DGDILREVQQ--FR--- 880
Query: 173 SPIIKSKEMWFARQALRYFQMGNYRRFLSTVAAEASYLQYCIIEPYIDEVRSLALCCIHN 232
I +S E+ FA Q N+ RF V+A ASYL CI+ Y ++VR AL + N
Sbjct: 881 KEIRESPEVTFAVQVFAALNSNNFVRFFKLVSA-ASYLSSCILHRYFNQVRRQALKIL-N 938
Query: 233 CCYKLHP-----YPLGHLSKVLMMEES-DVELFCNAYGL 265
+ + +P+ ++LM + + F YGL
Sbjct: 939 VAFTVGSQRSTIFPVEDFVRMLMFRNATEATEFIQQYGL 977
>MGI|MGI:1930089 [details] [associations]
symbol:Mcm3ap "minichromosome maintenance deficient 3 (S.
cerevisiae) associated protein" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005829 "cytosol" evidence=ISO] MGI:MGI:1930089 Pfam:PF03399
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 EMBL:CH466553
InterPro:IPR005062 CTD:8888 eggNOG:COG5079 HOVERGEN:HBG052431
OMA:AHQMKVQ OrthoDB:EOG44J2H4 EMBL:AJ006590 EMBL:BC052452
IPI:IPI00125222 RefSeq:NP_062307.2 UniGene:Mm.30098
ProteinModelPortal:Q9WUU9 SMR:Q9WUU9 STRING:Q9WUU9
PhosphoSite:Q9WUU9 PaxDb:Q9WUU9 PRIDE:Q9WUU9
Ensembl:ENSMUST00000170795 GeneID:54387 KEGG:mmu:54387
GeneTree:ENSGT00530000063781 InParanoid:Q7TS87 NextBio:311220
Bgee:Q9WUU9 Genevestigator:Q9WUU9 GermOnline:ENSMUSG00000001150
Uniprot:Q9WUU9
Length = 1971
Score = 219 (82.2 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 67/241 (27%), Positives = 117/241 (48%)
Query: 55 HDFVFDRTRSVRQDLIMQNIVNDKAINMFEKIVKFHVISHHKLRXXXXXXXXXPLHYLNL 114
+DFV++RTR +R+D+ Q++ + +++ EK +FH+ H + + N
Sbjct: 713 YDFVWNRTRGIRKDITQQHLCDPLTVSLIEKCTRFHIHCAHFMCEEPMSSFDAKI---NN 769
Query: 115 EQLTKALTSLYNLYEANRSSKPIHEKEAEFRSFYVLLHLDSNGQPVGESLSLWFRHVPSP 174
E +TK L SL +Y+ R+ EAEF+ + VLL+L+ G+ L + P
Sbjct: 770 ENMTKCLQSLKEMYQDLRNKGVFCASEAEFQGYNVLLNLNK-----GDILREVQQFHPD- 823
Query: 175 IIKSKEMWFARQALRYFQMGNYRRFLSTVAAEASYLQYCIIEPYIDEVRSLALCCIHNCC 234
+ S E+ FA QA N+ RF V + ASYL C++ Y +++R AL + N
Sbjct: 824 VRNSPEVNFAVQAFAALNSNNFVRFFKLVQS-ASYLNACLLHCYFNQIRKDALRAL-NVA 881
Query: 235 YKLHP-----YPLGHLSKVLMMEESDVEL-FCNAYGLQTCIDEVGNKLLPTKQTTFCRPK 288
Y + +PL + ++L+ +S+ F N +GL V + + ++ F P+
Sbjct: 882 YTVSTQRSTVFPLDGVVRMLLFRDSEEATNFLNYHGLT-----VADGCVELNRSAFLEPE 936
Query: 289 G 289
G
Sbjct: 937 G 937
>RGD|1306834 [details] [associations]
symbol:Mcm3ap "minichromosome maintenance complex component 3
associated protein" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] Pfam:PF03399 RGD:1306834
EMBL:CH473988 InterPro:IPR005062 CTD:8888
GeneTree:ENSGT00530000063781 IPI:IPI00951536 RefSeq:NP_001099852.1
UniGene:Rn.55967 Ensembl:ENSRNOT00000064637 GeneID:294339
KEGG:rno:294339 UCSC:RGD:1306834 NextBio:638034 Uniprot:D3ZTA3
Length = 1908
Score = 216 (81.1 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 66/241 (27%), Positives = 116/241 (48%)
Query: 55 HDFVFDRTRSVRQDLIMQNIVNDKAINMFEKIVKFHVISHHKLRXXXXXXXXXPLHYLNL 114
+DFV++RTR +R+D+ Q++ + +++ EK +FH+ H + + N
Sbjct: 718 YDFVWNRTRGIRKDITQQHLCDPLTVSLIEKCTRFHIHCAHFMCEEPMSSFDAKI---NN 774
Query: 115 EQLTKALTSLYNLYEANRSSKPIHEKEAEFRSFYVLLHLDSNGQPVGESLSLWFRHVPSP 174
E +TK L SL +Y+ R+ EAEF+ + VLL+L+ G+ L + P
Sbjct: 775 ENMTKCLQSLKEMYQDLRNKGVFCASEAEFQGYNVLLNLNK-----GDILREVQQFHPD- 828
Query: 175 IIKSKEMWFARQALRYFQMGNYRRFLSTVAAEASYLQYCIIEPYIDEVRSLALCCIHNCC 234
+ S E+ FA QA N+ RF V + ASYL C++ Y +++R AL + N
Sbjct: 829 VRNSPEVDFAVQAFAALNSNNFVRFFKLVQS-ASYLNACLLHCYFNQIRKDALRAL-NVA 886
Query: 235 YKLHP-----YPLGHLSKVLMMEE-SDVELFCNAYGLQTCIDEVGNKLLPTKQTTFCRPK 288
Y + +PL + ++L+ + + F N +GL V + + ++ F P+
Sbjct: 887 YTVSTQRSTVFPLDGVVRMLLFRDCEEATSFLNYHGLT-----VADGCVELNRSAFLEPE 941
Query: 289 G 289
G
Sbjct: 942 G 942
>UNIPROTKB|E1BJE7 [details] [associations]
symbol:MCM3AP "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005829 "cytosol" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] Pfam:PF03399 GO:GO:0005829 GO:GO:0005634
InterPro:IPR005062 CTD:8888 OMA:AHQMKVQ
GeneTree:ENSGT00530000063781 EMBL:DAAA02003508 IPI:IPI00706987
RefSeq:NP_001179732.1 UniGene:Bt.12377 Ensembl:ENSBTAT00000004097
GeneID:534293 KEGG:bta:534293 NextBio:20876342 Uniprot:E1BJE7
Length = 1979
Score = 215 (80.7 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 65/241 (26%), Positives = 117/241 (48%)
Query: 55 HDFVFDRTRSVRQDLIMQNIVNDKAINMFEKIVKFHVISHHKLRXXXXXXXXXPLHYLNL 114
+DF+++RTR +R+D+ Q++ + +++ EK +FH+ H + + N
Sbjct: 718 YDFLWNRTRGIRKDITQQHLCDPLTVSLIEKCTRFHIHCAHFMCEEPMSSFDAKI---NN 774
Query: 115 EQLTKALTSLYNLYEANRSSKPIHEKEAEFRSFYVLLHLDSNGQPVGESLSLWFRHVPSP 174
E +TK L SL +Y+ R+ EAEF+ + VLL+L+ G+ L + P+
Sbjct: 775 ENMTKCLQSLKEMYQDLRNKGVFCASEAEFQGYNVLLNLNK-----GDILREVQQFHPA- 828
Query: 175 IIKSKEMWFARQALRYFQMGNYRRFLSTVAAEASYLQYCIIEPYIDEVRSLALCCIHNCC 234
+ S E+ FA QA N+ RF V + ASYL C++ Y +++R AL + N
Sbjct: 829 VRNSPEVKFAVQAFAALNSNNFVRFFKLVQS-ASYLNACLLHCYFNQIRKDALRAL-NVA 886
Query: 235 YKLHP-----YPLGHLSKVLMMEESDVEL-FCNAYGLQTCIDEVGNKLLPTKQTTFCRPK 288
Y +PL + ++L+ + + F N +GL V + + +++F P+
Sbjct: 887 YTASTQRSTIFPLDGVVRMLLFRDGEEATDFLNCHGLT-----VSDGCVELNRSSFLEPE 941
Query: 289 G 289
G
Sbjct: 942 G 942
>UNIPROTKB|I3LCF4 [details] [associations]
symbol:MCM3AP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005829 "cytosol" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] Pfam:PF03399 GO:GO:0005829 GO:GO:0005634
InterPro:IPR005062 OMA:AHQMKVQ GeneTree:ENSGT00530000063781
EMBL:FP236737 Ensembl:ENSSSCT00000029980 Uniprot:I3LCF4
Length = 1990
Score = 215 (80.7 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 70/243 (28%), Positives = 120/243 (49%)
Query: 55 HDFVFDRTRSVRQDLIMQNIVNDKAINMFEKIVKFHVISHHKLRXXXXXXXXXPLHYLNL 114
+DF+++RTR +R+D+ Q++ + +++ EK +FH+ H + + N
Sbjct: 723 YDFLWNRTRGIRKDITQQHLCDPVTVSLIEKCTRFHIHCAHFMCEEPMSSFDANI---NS 779
Query: 115 EQLTKALTSLYNLYEANRSSKPIHEKEAEFRSFYVLLHLDSNGQPVGESLSLWFRHVPSP 174
E +T+ L SL +Y+ R EAEF+ + VLLHL+ G+ L + P+
Sbjct: 780 ENMTRCLQSLKEMYQDLRVKGVFCAGEAEFQGYNVLLHLNK-----GDILREVQQFHPA- 833
Query: 175 IIKSKEMWFARQALRYFQMGNYRRFLSTVAAEASYLQYCIIEPYIDEVRSLALCCIHNCC 234
+ S E+ FA QA N+ RF V + ASYL C++ Y +++R AL + N
Sbjct: 834 VRNSSEVKFAVQAFAALNSNNFVRFFKLVQS-ASYLNACLLHRYFNQIRRDALRAL-NVA 891
Query: 235 YKLHP-----YPLGHLSKVLMM---EESDVELFCNAYGLQTCIDEVGNKLLPTKQTTFCR 286
Y + P +PL + ++L+ EE+ L C +GL T D G + +++F
Sbjct: 892 YTVSPQRSTVFPLDSVVRMLLFQDCEEATDVLSC--HGL-TASD--G--CVELNRSSFLE 944
Query: 287 PKG 289
P+G
Sbjct: 945 PEG 947
>UNIPROTKB|O60318 [details] [associations]
symbol:MCM3AP "80 kDa MCM3-associated protein" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0003677 "DNA binding" evidence=TAS]
[GO:0006260 "DNA replication" evidence=TAS] [GO:0006606 "protein
import into nucleus" evidence=TAS] Pfam:PF03399 GO:GO:0005829
GO:GO:0005634 GO:GO:0003677 GO:GO:0006260 GO:GO:0006606
InterPro:IPR005062 PDB:4DHX PDBsum:4DHX EMBL:AJ010089 EMBL:AY590469
EMBL:BC104958 EMBL:BC104960 EMBL:AB011144 EMBL:AB005543
IPI:IPI00028954 PIR:T00339 RefSeq:NP_003897.2 UniGene:Hs.389037
ProteinModelPortal:O60318 SMR:O60318 DIP:DIP-31696N IntAct:O60318
MINT:MINT-1180375 STRING:O60318 PhosphoSite:O60318 PaxDb:O60318
PeptideAtlas:O60318 PRIDE:O60318 Ensembl:ENST00000291688
Ensembl:ENST00000397708 GeneID:8888 KEGG:hsa:8888 UCSC:uc002zir.1
CTD:8888 GeneCards:GC21M047655 H-InvDB:HIX0016189 HGNC:HGNC:6946
HPA:HPA021527 MIM:603294 neXtProt:NX_O60318 PharmGKB:PA30692
eggNOG:COG5079 HOGENOM:HOG000113500 HOVERGEN:HBG052431
InParanoid:O60318 OMA:AHQMKVQ OrthoDB:EOG44J2H4 PhylomeDB:O60318
ChiTaRS:MCM3AP GenomeRNAi:8888 NextBio:33379 ArrayExpress:O60318
Bgee:O60318 CleanEx:HS_MCM3AP Genevestigator:O60318
GermOnline:ENSG00000160294 Uniprot:O60318
Length = 1980
Score = 210 (79.0 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 70/271 (25%), Positives = 121/271 (44%)
Query: 26 DVRPLPVXXXXXXXXXXXXXXXXH-PFEVIHDFVFDRTRSVRQDLIMQNIVNDKAINMFE 84
++RPLPV +DFV++RTR +R+D+ Q++ + +++ E
Sbjct: 690 ELRPLPVLSRTMDYLVTQIMDQKEGSLRDWYDFVWNRTRGIRKDITQQHLCDPLTVSLIE 749
Query: 85 KIVKFHVISHHKLRXXXXXXXXXPLHYLNLEQLTKALTSLYNLYEANRSSKPIHEKEAEF 144
K +FH+ H + + N E +TK L SL +Y+ R+ EAEF
Sbjct: 750 KCTRFHIHCAHFMCEEPMSSFDAKI---NNENMTKCLQSLKEMYQDLRNKGVFCASEAEF 806
Query: 145 RSFYVLLHLDSNGQPVGESLSLWFRHVPSPIIKSKEMWFARQALRYFQMGNYRRFLSTVA 204
+ + VLL L+ G+ L + P+ + S E+ FA QA N+ RF V
Sbjct: 807 QGYNVLLSLNK-----GDILREVQQFHPA-VRNSSEVKFAVQAFAALNSNNFVRFFKLVQ 860
Query: 205 AEASYLQYCIIEPYIDEVRSLALCCIHNCCYKLHP-----YPLGHLSKVLMMEESDVEL- 258
+ ASYL C++ Y ++R AL + N Y + +PL + ++L+ + +
Sbjct: 861 S-ASYLNACLLHCYFSQIRKDALRAL-NFAYTVSTQRSTIFPLDGVVRMLLFRDCEEATD 918
Query: 259 FCNAYGLQTCIDEVGNKLLPTKQTTFCRPKG 289
F +GL V + + ++ F P+G
Sbjct: 919 FLTCHGLT-----VSDGCVELNRSAFLEPEG 944
>POMBASE|SPCC70.06 [details] [associations]
symbol:SPCC70.06 "nuclear export factor (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005643 "nuclear pore" evidence=ISO] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=ISO] [GO:0006611
"protein export from nucleus" evidence=ISO] [GO:0042274 "ribosomal
small subunit biogenesis" evidence=ISO] Pfam:PF03399
PomBase:SPCC70.06 GO:GO:0005829 GO:GO:0005730 EMBL:CU329672
GO:GO:0005643 GO:GO:0006406 GO:GO:0006611 GO:GO:0042274
InterPro:IPR005062 eggNOG:COG5079 RefSeq:NP_588540.1 STRING:Q9USI4
EnsemblFungi:SPCC70.06.1 GeneID:2539567 KEGG:spo:SPCC70.06
OMA:CHELIAR OrthoDB:EOG4GMZ72 NextBio:20800726 Uniprot:Q9USI4
Length = 458
Score = 157 (60.3 bits), Expect = 8.2e-14, Sum P(2) = 8.2e-14
Identities = 55/160 (34%), Positives = 76/160 (47%)
Query: 25 SDVRPLPVXXXXXXXXXXXXXXXXHPFEVIHDFVFDRTRSVRQDLIMQNIVNDKAINMFE 84
SDVRP P + H FV DRTR+VRQD +Q+ + ++ E
Sbjct: 126 SDVRP-PSILKNTIDYLFKVILDRYSLREAHAFVRDRTRAVRQDFSVQSSFSQDSVYCHE 184
Query: 85 KIVKFHVISHHKLRXXXXXXXXXPLHYLNLEQLTKALTSLYNL---YEANRSSKPIHEKE 141
I +FH+IS H+L +EQL+K++ LY L Y+ K E
Sbjct: 185 LIARFHIISLHELAHTPNFSRQQ-----EIEQLSKSMEILYTLGQLYDYMHLRKEHCTHE 239
Query: 142 AEFRSFYVLLHLDSNGQP-VG-ESLSLWFRHV-PSPIIKS 178
AEFR++ VLL L G P VG ++LS W V PI+K+
Sbjct: 240 AEFRAYMVLLSL---GDPSVGLDTLS-WPDFVFKKPIVKT 275
Score = 86 (35.3 bits), Expect = 8.2e-14, Sum P(2) = 8.2e-14
Identities = 26/97 (26%), Positives = 44/97 (45%)
Query: 196 YRRFLSTVAA-EASYLQYCIIEPYIDEVRSLALCCIHNCCYKLHP-YPLGHLSKVLMMEE 253
Y RF ++ SYL C+++ ++ +R+ AL + C H P L K+L
Sbjct: 313 YTRFFKIASSFRVSYLMGCLLDLFVPSIRTGALKAMKKCYLSAHSNIPFKDLMKILAATS 372
Query: 254 SDVELF--CNAYGLQT-CIDEVGNKLLPTKQTTFCRP 287
D EL C +GL+ I E + ++ ++T P
Sbjct: 373 ED-ELVQCCKMHGLKIEYIGEQPSAVVLNRKTVITEP 408
>WB|WBGene00017642 [details] [associations]
symbol:F20D12.2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0019915 "lipid storage" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] Pfam:PF03399 GO:GO:0009792
GO:GO:0002119 GO:GO:0010171 GO:GO:0000003 GO:GO:0019915
InterPro:IPR005062 EMBL:FO080909 eggNOG:COG5079
GeneTree:ENSGT00530000063781 PIR:T16112 RefSeq:NP_501328.1
ProteinModelPortal:Q19643 SMR:Q19643 STRING:Q19643 PaxDb:Q19643
EnsemblMetazoa:F20D12.2 GeneID:177589 KEGG:cel:CELE_F20D12.2
UCSC:F20D12.2 CTD:177589 WormBase:F20D12.2 HOGENOM:HOG000021181
InParanoid:Q19643 OMA:CDVSNSF NextBio:897484 Uniprot:Q19643
Length = 1116
Score = 201 (75.8 bits), Expect = 9.4e-14, P = 9.4e-14
Identities = 63/216 (29%), Positives = 112/216 (51%)
Query: 55 HDFVFDRTRSVRQDLIMQNIVNDKAINMFEKIVKFHVISHHKLRXXXXXXXXXPLHYLNL 114
++F+++RTR++R+++ ++ + A+N+ E+ + H++ + L P +N
Sbjct: 377 YNFLWNRTRALRKEVTQLSLSDTLALNLVERCTRLHILFGYVL-CDLGVEQFDPA--MNN 433
Query: 115 EQLTKALTSLYNLYEANRSSKPIHEKEAEFRSFYVLLHL-DSNGQPVGESLSLWFRHVPS 173
E L K L +L +LYE E E EFRS+ V+LH+ D+N + + L+ +R S
Sbjct: 434 ETLGKCLQTLRHLYEDFEKRGISCENEPEFRSYDVMLHMNDTN--VLAQVLA--YR---S 486
Query: 174 PIIKSKEMWFARQALRYFQMGNYRRFLSTVAAEASYLQYCIIEPYIDEVRSLALCCIHNC 233
+ +S+ + A Q F+ NY RF + +ASYLQ C+ RS A+ I +
Sbjct: 487 EVRQSQPVRLALQLATAFRDNNYFRFFRLLQTQASYLQCCVAHKLFAVTRSNAIR-IMSI 545
Query: 234 CYKLH--PYPLGHLSKVLMMEES-DVELFCNAYGLQ 266
Y + PYPL L ++L + + D+ + N Y L+
Sbjct: 546 SYGIGNIPYPLDKLQRILGFDNTEDLTVMLNIYELE 581
>FB|FBgn0028974 [details] [associations]
symbol:xmas-2 "xmas-2" species:7227 "Drosophila melanogaster"
[GO:0009790 "embryo development" evidence=NAS] [GO:0003729 "mRNA
binding" evidence=NAS] [GO:0007283 "spermatogenesis" evidence=NAS]
[GO:0048477 "oogenesis" evidence=NAS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016973 "poly(A)+ mRNA export from nucleus"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0005643 "nuclear pore"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 Pfam:PF03399 GO:GO:0030154 GO:GO:0000166
EMBL:AE014298 Gene3D:3.30.70.330 GO:GO:0045944 GO:GO:0048477
GO:GO:0005643 GO:GO:0007283 GO:GO:0003723 GO:GO:0009790
GO:GO:0007292 GO:GO:0016973 InterPro:IPR005062 eggNOG:COG5079
GeneTree:ENSGT00530000063781 EMBL:AF216664 EMBL:AY128417
RefSeq:NP_728054.1 UniGene:Dm.14100 ProteinModelPortal:Q9U3V9
SMR:Q9U3V9 IntAct:Q9U3V9 MINT:MINT-6179085 STRING:Q9U3V9
PaxDb:Q9U3V9 EnsemblMetazoa:FBtr0074404 GeneID:44271
KEGG:dme:Dmel_CG32562 UCSC:CG32562-RA CTD:44271 FlyBase:FBgn0028974
InParanoid:Q9U3V9 OMA:YLMHEIM OrthoDB:EOG4T4B97 PhylomeDB:Q9U3V9
GenomeRNAi:44271 NextBio:837087 Bgee:Q9U3V9 GermOnline:CG32562
Uniprot:Q9U3V9
Length = 1370
Score = 200 (75.5 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 74/247 (29%), Positives = 117/247 (47%)
Query: 49 HPFEVIHDFVFDRTRSVRQDLIMQNIVNDKAINMFEKIVKFHVISHHKLRXXXXXXXXXP 108
H + H FV+DRTRS+R+++ Q + + A+ + E+ +FH+ H R
Sbjct: 286 HMGDWFH-FVWDRTRSIRKEITQQELCSLGAVKLVEQCARFHI--HCAARLVDADPSVFD 342
Query: 109 LHYLNLEQLTKALTSLYNLYEANRSSKPIHEKEAEFRSFYVLLHL-DSNGQPVGESLSLW 167
+N E LTK L +L +Y R KEAEFR + VLL+L D+N LW
Sbjct: 343 SK-INAENLTKCLQTLKYMYHDLRIKGVPCPKEAEFRGYIVLLNLADAN--------FLW 393
Query: 168 -FRHVPSPIIKSKEMWFARQALRYF---QMGNYRRFLSTVA-AEASYLQYCIIEPYIDEV 222
+P+ + E+ RQA++++ Q N+ RF +A + SYL CI+ Y +
Sbjct: 394 DIGQLPAELQSCPEV---RQAIQFYLALQDTNFVRFFQLLADKDTSYLSACILVNYFTRL 450
Query: 223 RSLALCCIHNCCYK------LHPYPLGHLSKVLMM-EESDVELFCNAYGLQTCIDEVGNK 275
R L L + Y+ + PL +++++L E + F YGLQ I+E G
Sbjct: 451 RVLGLHRLIQA-YRSPRKDEVSSLPLSYIAELLSFASEQEAADFVQHYGLQ--INEAGRV 507
Query: 276 LLPTKQT 282
+L T
Sbjct: 508 VLSRMHT 514
>POMBASE|SPCC576.05 [details] [associations]
symbol:sac3 "nuclear export factor Sac3 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005643 "nuclear pore" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006406 "mRNA export from nucleus" evidence=ISO]
[GO:0006611 "protein export from nucleus" evidence=ISO] [GO:0042274
"ribosomal small subunit biogenesis" evidence=ISO]
PomBase:SPCC576.05 Pfam:PF03399 GO:GO:0005829 EMBL:CU329672
GO:GO:0005643 GO:GO:0006406 GO:GO:0006611 GO:GO:0042274
InterPro:IPR005062 eggNOG:COG5079 PIR:T41415 RefSeq:NP_588432.1
EnsemblFungi:SPCC576.05.1 GeneID:2539561 KEGG:spo:SPCC576.05
OrthoDB:EOG49GPR5 NextBio:20800721 InterPro:IPR017173
PIRSF:PIRSF037320 Uniprot:O74889
Length = 1024
Score = 198 (74.8 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 78/281 (27%), Positives = 114/281 (40%)
Query: 25 SDVRPLPVXXXXXXXXXXXXXXXXHPFEVIHDFVFDRTRSVRQDLIMQNIVNDKAINMFE 84
SDVRP PV P E H FV DRTRS+RQD +QN + A+ E
Sbjct: 160 SDVRPPPVLKKSLDYLVDKIVCGPDPLENTHFFVRDRTRSIRQDFTLQNCRDLDAVACHE 219
Query: 85 KIVKFHVISHHKLRXXXXXXXXXPLHYLNLEQLTKA-LTSLYNLYEANRSSKPIHEKEAE 143
+I ++H++ H+L +EQL K L SL Y+ R K E E
Sbjct: 220 RIARYHILCIHQLCEKKQFSAQQ-----EVEQLRKGILQSLCEFYDDLRKVKIRCPNEPE 274
Query: 144 FRSFYVLLHLDSNGQPVGESLSLWFRHVPSPIIKSKEMWFARQALRYFQMGN-------- 195
FRS+ ++ HL + V +S L P I + + A + Q N
Sbjct: 275 FRSYAIITHL-RDPDVVRQSQIL-----PIEIFDDQRVQLALRLSALAQKNNERVGHILP 328
Query: 196 ---------YRRFLSTVAAEA-SYLQYCIIEPYIDEVRSLALCCIHNCCYKLHP-YPLGH 244
Y RF V + A +YL C++E + +R AL + H +P G
Sbjct: 329 RNTEACPNLYTRFFKLVQSPAVTYLMACLLESHFMSIRKGALKAMRKAFMSAHANFPCGD 388
Query: 245 LSKVLMMEESD-VELFCNAYGLQTCIDEVGNKLLPTKQTTF 284
L ++L + + F YGL+ D+ G + +T F
Sbjct: 389 LKRILHFDTVEQAASFSRYYGLEVS-DDNGELSINLNKTAF 428
>CGD|CAL0005530 [details] [associations]
symbol:SAC3 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0070390 "transcription export complex 2"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0071033 "nuclear retention of pre-mRNA at the site of
transcription" evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0031124 "mRNA 3'-end
processing" evidence=IEA] [GO:0042274 "ribosomal small subunit
biogenesis" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0030029 "actin filament-based process" evidence=IEA]
[GO:0000973 "posttranscriptional tethering of RNA polymerase II
gene DNA at nuclear periphery" evidence=IEA] [GO:0006611 "protein
export from nucleus" evidence=IEA] Pfam:PF03399 EMBL:AACQ01000008
InterPro:IPR005062 eggNOG:COG5079 InterPro:IPR017173
PIRSF:PIRSF037320 InterPro:IPR024293 Pfam:PF12209
RefSeq:XP_722457.1 STRING:Q5ALM2 GeneID:3635960 KEGG:cal:CaO19.9129
CGD:CAL0066394 Uniprot:Q5ALM2
Length = 1225
Score = 187 (70.9 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 61/229 (26%), Positives = 103/229 (44%)
Query: 55 HDFVFDRTRSVRQDLIMQNIVNDKAINMFEKIVKFHVISHHKLRXXXXXXXXXPLHYLNL 114
H F++DRTRS+RQD QN +A++ E+IV+ H++S H + L
Sbjct: 290 HSFIWDRTRSIRQDFTYQNNFGPEAVDCNERIVRIHLLSLHIMAGSDVEYSQQQ----EL 345
Query: 115 EQLTKALTSLYNLYEANRSSKPIHEKEAEFRSFYVLLHLDSNGQPVGESLSLWFRHVPSP 174
EQ KAL +L +Y+ R++ EAEFR++++L H+ P L + +P
Sbjct: 346 EQFNKALQTLMEIYQDVRNNGGKSPNEAEFRAYHLLSHVRD---P---DLERQIQKLPDE 399
Query: 175 IIKSKEMWFARQALRYFQMGN---------------YRRFLSTVAAEAS-YLQYCIIEPY 218
+ K + A + + N Y F V +E + +L C++E +
Sbjct: 400 VYNDKLVQLALRFRKITTQNNVVERGVTNLVGALNLYTEFFRLVYSEETPFLMACLLETH 459
Query: 219 IDEVRSLALCCIHNCCY-KLHPYPLGHLSKVLMMEE-SDVELFCNAYGL 265
+E+R AL I + K PY + L +VL + ++ F Y +
Sbjct: 460 FNEIRFYALKAISRSFHTKTKPYAIQRLQQVLGFDSVQKLQKFLGYYDI 508
>UNIPROTKB|Q5ALM2 [details] [associations]
symbol:SAC3 "Putative uncharacterized protein SAC3"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] Pfam:PF03399 EMBL:AACQ01000008
InterPro:IPR005062 eggNOG:COG5079 InterPro:IPR017173
PIRSF:PIRSF037320 InterPro:IPR024293 Pfam:PF12209
RefSeq:XP_722457.1 STRING:Q5ALM2 GeneID:3635960 KEGG:cal:CaO19.9129
CGD:CAL0066394 Uniprot:Q5ALM2
Length = 1225
Score = 187 (70.9 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 61/229 (26%), Positives = 103/229 (44%)
Query: 55 HDFVFDRTRSVRQDLIMQNIVNDKAINMFEKIVKFHVISHHKLRXXXXXXXXXPLHYLNL 114
H F++DRTRS+RQD QN +A++ E+IV+ H++S H + L
Sbjct: 290 HSFIWDRTRSIRQDFTYQNNFGPEAVDCNERIVRIHLLSLHIMAGSDVEYSQQQ----EL 345
Query: 115 EQLTKALTSLYNLYEANRSSKPIHEKEAEFRSFYVLLHLDSNGQPVGESLSLWFRHVPSP 174
EQ KAL +L +Y+ R++ EAEFR++++L H+ P L + +P
Sbjct: 346 EQFNKALQTLMEIYQDVRNNGGKSPNEAEFRAYHLLSHVRD---P---DLERQIQKLPDE 399
Query: 175 IIKSKEMWFARQALRYFQMGN---------------YRRFLSTVAAEAS-YLQYCIIEPY 218
+ K + A + + N Y F V +E + +L C++E +
Sbjct: 400 VYNDKLVQLALRFRKITTQNNVVERGVTNLVGALNLYTEFFRLVYSEETPFLMACLLETH 459
Query: 219 IDEVRSLALCCIHNCCY-KLHPYPLGHLSKVLMMEE-SDVELFCNAYGL 265
+E+R AL I + K PY + L +VL + ++ F Y +
Sbjct: 460 FNEIRFYALKAISRSFHTKTKPYAIQRLQQVLGFDSVQKLQKFLGYYDI 508
>ASPGD|ASPL0000066715 [details] [associations]
symbol:sac3 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF03399 EMBL:BN001304 EMBL:AACD01000131
InterPro:IPR005062 eggNOG:COG5079 RefSeq:XP_680995.1
EnsemblFungi:CADANIAT00000859 GeneID:2869465 KEGG:ani:AN7726.2
HOGENOM:HOG000174491 OMA:IARFHIV OrthoDB:EOG41VPB5 Uniprot:Q5AVF4
Length = 1237
Score = 175 (66.7 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 58/224 (25%), Positives = 95/224 (42%)
Query: 50 PFEVIHDFVFDRTRSVRQDLIMQNIVNDK----AINMFEKIVKFHVISHHKLRXXXXXXX 105
P +IH FV+DRTRS+R D +Q + ++ A+ E+I +FH++S H L
Sbjct: 308 PLGIIHKFVWDRTRSIRNDFSVQQLTQEEDVKIAVTCLERIARFHIVSLHLL---SSPAN 364
Query: 106 XXPL-HYLNLEQLTKALTSLYNLYEANRSSKPIHEKEAEFRSFYVLLHLDSNGQPVGESL 164
P + EQL + SL Y+ NR + E EFR++Y++ + + +
Sbjct: 365 EEPFDRHQEREQLNNTMLSLMYYYDDNRG-RISFPNEDEFRAYYIIFSIHDQRPDLEARV 423
Query: 165 SLW---FRHVPSPIIKSKEMWFARQALRY-----------FQMGNYRRFLSTVAAEA-SY 209
W R+ P + + A Y G Y RF + V + SY
Sbjct: 424 QKWPPELRNAPRVRVALELFAAAGNTWEYQGTLDAKRPNAIAQGFYTRFFNLVNSPGVSY 483
Query: 210 LQYCIIEPYIDEVRSLALCCIHNCCYKLHPYPLGHLSKVLMMEE 253
L C+ E Y + +R A+ I Y +P H ++ ++E
Sbjct: 484 LMACVAEIYFNHMRQTAIRSIWKG-YCRYPSSQQHKNEEWTIDE 526
>SGD|S000002566 [details] [associations]
symbol:SAC3 "Nuclear pore-associated protein" species:4932
"Saccharomyces cerevisiae" [GO:0006406 "mRNA export from nucleus"
evidence=IGI;IMP;IPI] [GO:0042274 "ribosomal small subunit
biogenesis" evidence=IMP] [GO:0007067 "mitosis" evidence=IMP]
[GO:0006611 "protein export from nucleus" evidence=IGI;IMP]
[GO:0000973 "posttranscriptional tethering of RNA polymerase II
gene DNA at nuclear periphery" evidence=IMP] [GO:0071033 "nuclear
retention of pre-mRNA at the site of transcription" evidence=IMP]
[GO:0031124 "mRNA 3'-end processing" evidence=IMP] [GO:0070390
"transcription export complex 2" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0030029
"actin filament-based process" evidence=IGI] [GO:0005635 "nuclear
envelope" evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IMP] [GO:0005643 "nuclear
pore" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
SGD:S000002566 Pfam:PF03399 GO:GO:0007067 GO:GO:0006355
GO:GO:0005643 EMBL:BK006938 GO:GO:0006351 GO:GO:0006406
GO:GO:0006611 GO:GO:0030029 GO:GO:0042274 GO:GO:0006283 PDB:3FWB
PDB:3FWC PDBsum:3FWB PDBsum:3FWC GO:GO:0070390 GO:GO:0031124
EMBL:Z50046 KO:K12863 RefSeq:NP_010447.3 GeneID:851741
KEGG:sce:YDR163W InterPro:IPR005062 RefSeq:NP_010443.3
GeneID:851737 KEGG:sce:YDR159W GO:GO:0000973 GO:GO:0071033
eggNOG:COG5079 GeneTree:ENSGT00530000063781 OrthoDB:EOG49GPR5
InterPro:IPR017173 PIRSF:PIRSF037320 EMBL:Z47805 EMBL:U35227
PIR:S51323 PDB:3T5V PDBsum:3T5V ProteinModelPortal:P46674
SMR:P46674 DIP:DIP-2444N IntAct:P46674 MINT:MINT-596858
STRING:P46674 PaxDb:P46674 EnsemblFungi:YDR159W CYGD:YDR159w
HOGENOM:HOG000065955 OMA:WDRMRSI EvolutionaryTrace:P46674
NextBio:969466 Genevestigator:P46674 GermOnline:YDR159W
InterPro:IPR024293 Pfam:PF12209 Uniprot:P46674
Length = 1301
Score = 163 (62.4 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 60/224 (26%), Positives = 102/224 (45%)
Query: 57 FVFDRTRSVRQDLIMQNIVNDKAINMFEKIVKFHVISHHKLRXXXXXXXXXPLHYLNLEQ 116
F++DR RS+RQD QN +A++ E+IV+ H++ H + LEQ
Sbjct: 282 FLWDRMRSIRQDFTYQNYSGPEAVDCNERIVRIHLLILHIMVKSNVEFSLQQ----ELEQ 337
Query: 117 LTKALTSLYNLYEANRSSKPIHEKEAEFRSFYVLLHLDSNGQPVGESLSLWFRHVPSPII 176
L K+L +L +Y+ RSS EAEFR+ Y LL + Q E++ +H+ +
Sbjct: 338 LHKSLITLSEIYDDVRSSGGTCPNEAEFRA-YALLSKIRDPQ-YDENIQRLPKHIFQDKL 395
Query: 177 KSKEMWFARQALR--YFQMG-----N----YRRFLSTVAAEA-SYLQYCIIEPYIDEVRS 224
+ F R Y + G N Y RF + + + L ++ ++ ++R
Sbjct: 396 VQMALCFRRVISNSAYTERGFVKTENCLNFYARFFQLMQSPSLPLLMGFFLQMHLTDIRF 455
Query: 225 LALCCIHNCCYKLH-PYPLGHLSKVLMMEE-SDVELFCNAYGLQ 266
AL + + K H P P +L +L+ ++ FCN Y ++
Sbjct: 456 YALRALSHTLNKKHKPIPFIYLENMLLFNNRQEIIEFCNYYSIE 499
>RGD|1308049 [details] [associations]
symbol:Sac3d1 "SAC3 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005819
"spindle" evidence=IEA;ISO] [GO:0015630 "microtubule cytoskeleton"
evidence=ISO] [GO:0051225 "spindle assembly" evidence=IEA;ISO]
[GO:0051298 "centrosome duplication" evidence=IEA;ISO] Pfam:PF03399
RGD:1308049 GO:GO:0005813 GO:GO:0051298 GO:GO:0051225 GO:GO:0005819
InterPro:IPR005062 GeneTree:ENSGT00530000063781 OrthoDB:EOG4HMJ9Z
EMBL:AC120237 IPI:IPI00371474 Ensembl:ENSRNOT00000028509
Uniprot:D3ZT97
Length = 428
Score = 117 (46.2 bits), Expect = 0.00029, P = 0.00029
Identities = 54/222 (24%), Positives = 94/222 (42%)
Query: 54 IHDFVFDRTRSVRQDLIMQNIVNDKAINMFEKIVKFHVISHHKLRXXXXXXXXXPLHYLN 113
+ FV DR R+VR DL +Q + + +A + E + ++ ++R P+ L
Sbjct: 169 VASFVADRLRAVRLDLSLQGVDDAEAAAVLEPALATLLVVVARMRPEETRGVADPV--LL 226
Query: 114 LEQLTKALTSLYNLYEANRSSKPIHEKEAEFRSFYVLLHLDSNGQPVGESLSLWFRHVPS 173
Q+ + SL Y R P H ++A F+ ++L +L S + + E L L P+
Sbjct: 227 QTQVQEGFGSLRRCYA--RGKAP-HPRQAAFQGLFLLYNLGSV-EALQEVLQL-----PA 277
Query: 174 PIIKSKEMWFARQALRYFQMGNYRRFLSTVAAEASYLQYCIIEPYIDEVRSLALCCIHNC 233
+ + A F+ NY R L + YLQ C ++ +I R AL +
Sbjct: 278 ALRACPPLQTALAVDSAFREDNYAR-LFRLLRTLPYLQSCAVQEHIGYARRKALSRLSRA 336
Query: 234 CY--KLHPYPLGHLSKVLMMEE-SDVELFCNAYGLQTCIDEV 272
+ PL + +L ++ + + C A+GL D V
Sbjct: 337 LSTPRGQTLPLDFIVHLLALDGLQEAQDLCQAHGLTLDKDRV 378
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.139 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 308 283 0.00084 115 3 11 22 0.43 33
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 609 (65 KB)
Total size of DFA: 207 KB (2115 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.04u 0.09s 22.13t Elapsed: 00:00:01
Total cpu time: 22.04u 0.09s 22.13t Elapsed: 00:00:01
Start: Fri May 10 08:49:01 2013 End: Fri May 10 08:49:02 2013