BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>021727
MQQLLFTVMFSEMALIMVLLFKTPLRKLLIMSLDRVKRGRGPVVVKTVAGTVLVMLISSV
YNIMMIQKRWIDDEGAVVNPTDQVLLANHLLEATLMGASLFLAFMIDRLHHYIRELRIRR
KTMEAIKNQSRGFEDGKAASSEEIKALEDQMTTLKLKLKDLESELETKSKEANAAETNAV
ALRKQSEGFLFEYDRLLEENQNLRNQLQSLDWRLSHSDFRTVYWNAEKTASSTYCAAKVL
DFELLTKLSMGSSSCKSLLVLAAVSSIKRRKVRTDSDDNTSIIAGATRPFPSSAYSTEAR
VRNVDVNE

High Scoring Gene Products

Symbol, full name Information P value
AT5G42570 protein from Arabidopsis thaliana 3.1e-44
AT1G11905 protein from Arabidopsis thaliana 1.5e-42
AT5G48660 protein from Arabidopsis thaliana 1.3e-22
AT3G07190 protein from Arabidopsis thaliana 3.0e-21
AT3G20450 protein from Arabidopsis thaliana 1.2e-19

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  021727
        (308 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2152691 - symbol:AT5G42570 "AT5G42570" species...   466  3.1e-44   1
TAIR|locus:1005716776 - symbol:AT1G11905 "AT1G11905" spec...   450  1.5e-42   1
TAIR|locus:2152501 - symbol:AT5G48660 "AT5G48660" species...   262  1.3e-22   1
TAIR|locus:2098520 - symbol:AT3G07190 "AT3G07190" species...   249  3.0e-21   1
TAIR|locus:2092364 - symbol:AT3G20450 "AT3G20450" species...   234  1.2e-19   1


>TAIR|locus:2152691 [details] [associations]
            symbol:AT5G42570 "AT5G42570" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
            "endoplasmic reticulum" evidence=IEA;IDA] [GO:0006886
            "intracellular protein transport" evidence=IEA] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0005774 "vacuolar membrane" evidence=IDA]
            [GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR008417
            Pfam:PF05529 GO:GO:0005783 GO:GO:0016021 GO:GO:0009506
            GO:GO:0005774 EMBL:CP002688 GO:GO:0006886 PANTHER:PTHR12701
            KO:K14009 EMBL:AY054493 EMBL:BT024606 IPI:IPI00524282
            RefSeq:NP_568607.1 UniGene:At.26944 ProteinModelPortal:Q93XZ7
            PRIDE:Q93XZ7 EnsemblPlants:AT5G42570.1 GeneID:834264
            KEGG:ath:AT5G42570 TAIR:At5g42570 InParanoid:Q93XZ7 OMA:DNQNLRN
            PhylomeDB:Q93XZ7 ProtClustDB:CLSN2917731 Genevestigator:Q93XZ7
            Uniprot:Q93XZ7
        Length = 218

 Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
 Identities = 96/194 (49%), Positives = 126/194 (64%)

Query:     1 MQQLLFTVMFSEMALIMVLLFKTPLRKLLIMSLDXXXXXXXXXXXXXXXXXXXXMLISSV 60
             M  LL+TV+F+EMALI++LLFKTPLRKL+I++ D                    +L+SS+
Sbjct:     1 MIHLLYTVIFAEMALILLLLFKTPLRKLIILTFDRIKRGRGPVVVKTIGTTVFVVLLSSI 60

Query:    61 YNIMMIQKRWIDDEGAVVNPTDQVLLANHLLEATLMGASLFLAFMIDRLHHYIRELRIRR 120
             Y+++ IQ+R   ++GAV+NPTDQVL + HLLEA+LMG  LFL+ MIDRLHHYIRELR+ R
Sbjct:    61 YSLVNIQRR--SEDGAVLNPTDQVLASKHLLEASLMGFVLFLSLMIDRLHHYIRELRLLR 118

Query:   121 KTMEAIKNQSRGFEDGKAASSEEIKALEDQMXXXXXXXXXXXXXXXXXXXXANAAETNAV 180
             KTME  K Q+RGFEDGK  S EE+KAL +++                       A+    
Sbjct:   119 KTMETAKKQNRGFEDGKTTSGEEVKALGEEIAALKAKIKTLESESESKGKELKGAQGETE 178

Query:   181 ALRKQSEGFLFEYD 194
             ALRKQ++GFL EYD
Sbjct:   179 ALRKQADGFLMEYD 192


>TAIR|locus:1005716776 [details] [associations]
            symbol:AT1G11905 "AT1G11905" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
            evidence=IEA;IDA] [GO:0006886 "intracellular protein transport"
            evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
            InterPro:IPR008417 Pfam:PF05529 GO:GO:0005783 GO:GO:0016021
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006886
            PANTHER:PTHR12701 KO:K14009 EMBL:AY140048 IPI:IPI00944274
            RefSeq:NP_849648.4 UniGene:At.45890 ProteinModelPortal:Q8L702
            SMR:Q8L702 PRIDE:Q8L702 EnsemblPlants:AT1G11905.1 GeneID:837739
            KEGG:ath:AT1G11905 TAIR:At1g11905 HOGENOM:HOG000239029 OMA:DEVIMAK
            PhylomeDB:Q8L702 ProtClustDB:CLSN2723326 Genevestigator:Q8L702
            Uniprot:Q8L702
        Length = 221

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 99/217 (45%), Positives = 127/217 (58%)

Query:     1 MQQLLFTVMFSEMALIMVLLFKTPLRKLLIMSLDXXXXXXXXXXXXXXXXXXXXMLISSV 60
             MQQLLF V+  E+ +IM L FKTP+RKLLIMSLD                    +L++SV
Sbjct:     1 MQQLLFAVVLFEVVVIMALSFKTPIRKLLIMSLDRSKRGRGPVVIQTVSATVIVLLVTSV 60

Query:    61 YNIMMIQKRWIDDEGAVVNPTDQVLLANHLLEATLMGASLFLAFMIDRLHHYIRELRIRR 120
             YN+M IQKRWI+D   VVNPTD+V++A HLLE+TLMG  LFL  MIDRLHHY+RELRIRR
Sbjct:    61 YNMMGIQKRWIED--GVVNPTDEVIMAKHLLESTLMGGFLFLGLMIDRLHHYMRELRIRR 118

Query:   121 KTMEAIKNQSRGFEDGKAASSEEIKALEDQMXXXXXXXXXXXXXXXXXXXXANAAETNAV 180
             K ME IK +    E  KA   +E+K L +++                        +T+AV
Sbjct:   119 KNMEVIKKEGALLEGVKARGLDEVKNLMEEITSLRKRQEQLDSELEARSKEIRTEKTSAV 178

Query:   181 ALRKQSEGFLFEYDXXXXXXXXXXXXXXSLDWRLSHS 217
             AL+KQSEGFL E++              ++D +LS S
Sbjct:   179 ALQKQSEGFLIEFNRLLEENQVLRDQLHTVDSKLSRS 215


>TAIR|locus:2152501 [details] [associations]
            symbol:AT5G48660 "AT5G48660" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
            "endoplasmic reticulum" evidence=IEA] [GO:0006886 "intracellular
            protein transport" evidence=IEA] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0016021 "integral to membrane" evidence=IEA]
            InterPro:IPR008417 Pfam:PF05529 GO:GO:0005783 GO:GO:0016021
            EMBL:CP002688 GO:GO:0006886 EMBL:AB015468 PANTHER:PTHR12701
            KO:K14009 HOGENOM:HOG000239029 EMBL:AY954876 EMBL:DQ132749
            IPI:IPI00539904 RefSeq:NP_199677.1 UniGene:At.55437
            ProteinModelPortal:Q9FJK4 SMR:Q9FJK4 PRIDE:Q9FJK4
            EnsemblPlants:AT5G48660.1 GeneID:834924 KEGG:ath:AT5G48660
            TAIR:At5g48660 InParanoid:Q9FJK4 OMA:FIIDRMH PhylomeDB:Q9FJK4
            ProtClustDB:CLSN2684824 Genevestigator:Q9FJK4 Uniprot:Q9FJK4
        Length = 219

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 68/202 (33%), Positives = 105/202 (51%)

Query:     1 MQQLLFTVMFSEMALIMVLLFKT-PLRKLLIMSLDXXXXXXXXXXXXXXXXXXXXMLISS 59
             M QLLF V+F E A+  +LL K  PLR+L+I SLD                    +L S+
Sbjct:     1 MIQLLFLVLFVEGAIAFLLLIKIGPLRELVIKSLDQMKMGKGPATVKTIAGTMSVILFSN 60

Query:    60 VYNIMMIQKRWIDDEGAVVNPTDQVLLANHLLEATLMGASLFLAFMIDRLHHYIREL-RI 118
             + +I+ IQ +    +   ++P DQVL   HLLEA+L+G  LFL F+IDR+HHY+R+L  +
Sbjct:    61 LMSIVKIQNKGA--KLGTMSPMDQVLWRTHLLEASLLGVVLFLGFIIDRMHHYLRKLINL 118

Query:   119 R------RKTMEAIKNQSRGFEDGKAASSEEIKALEDQMXXXXXXXXXXXXXXXXXXXXA 172
             R      ++ +E ++ +    ++ +  +S+EIK L+ ++                     
Sbjct:   119 RSNVGSSKEELEQLQKERTELKEKEEKASKEIKQLQVKLSSITERLKKAETESKEKEKKL 178

Query:   173 NAAETNAVALRKQSEGFLFEYD 194
               AET+  AL+KQS   L EYD
Sbjct:   179 ETAETHVTALQKQSAELLLEYD 200


>TAIR|locus:2098520 [details] [associations]
            symbol:AT3G07190 "AT3G07190" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
            "endoplasmic reticulum" evidence=IEA] [GO:0006886 "intracellular
            protein transport" evidence=IEA] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0016021 "integral to membrane" evidence=IEA]
            InterPro:IPR008417 Pfam:PF05529 GO:GO:0005783 GO:GO:0016021
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006886
            PANTHER:PTHR12701 KO:K14009 EMBL:AC012395 HOGENOM:HOG000239029
            ProtClustDB:CLSN2684824 EMBL:BT014780 EMBL:BT044608 IPI:IPI00526650
            RefSeq:NP_187375.1 UniGene:At.27635 ProteinModelPortal:Q9SFU9
            PaxDb:Q9SFU9 PRIDE:Q9SFU9 EnsemblPlants:AT3G07190.1 GeneID:819906
            KEGG:ath:AT3G07190 TAIR:At3g07190 eggNOG:NOG326792
            InParanoid:Q9SFU9 OMA:THHYLEK PhylomeDB:Q9SFU9
            Genevestigator:Q9SFU9 Uniprot:Q9SFU9
        Length = 220

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 66/202 (32%), Positives = 100/202 (49%)

Query:     1 MQQLLFTVMFSEMALIMVLLFKT-PLRKLLIMSLDXXXXXXXXXXXXXXXXXXXXMLISS 59
             M QLLF V+F E A+  +LL K  PLR+L++ SLD                    +L+S+
Sbjct:     1 MIQLLFLVLFVEGAIAFLLLVKIGPLRELVMKSLDQLKLGKRPATLKTIAGTMSVILLSN 60

Query:    60 VYNIMMIQKRWIDDEGAVVNPTDQVLLANHLLEATLMGASLFLAFMIDRLHHYIRELRIR 119
             + NI+ IQ +    +   ++P DQVL   HLLEA+LMG  LF  F+IDR HHY+ +L   
Sbjct:    61 LMNIIKIQNKGA--KLGTMSPMDQVLWRTHLLEASLMGVVLFFGFIIDRTHHYLEKLITL 118

Query:   120 RKT-------MEAIKNQSRGFEDGKAASSEEIKALEDQMXXXXXXXXXXXXXXXXXXXXA 172
             R         +E ++ +    ++ +  +S+EIK L++++                     
Sbjct:   119 RSNVGSSKGELEELRKERIELKEKEEKTSKEIKQLKEKLSCVSENLKKLEKESKEKETKL 178

Query:   173 NAAETNAVALRKQSEGFLFEYD 194
               AE +  AL+KQS   L EYD
Sbjct:   179 ETAEAHVTALQKQSSELLLEYD 200


>TAIR|locus:2092364 [details] [associations]
            symbol:AT3G20450 "AT3G20450" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
            "endoplasmic reticulum" evidence=IEA] [GO:0006886 "intracellular
            protein transport" evidence=IEA] [GO:0016021 "integral to membrane"
            evidence=IEA] InterPro:IPR008417 GO:GO:0005783 GO:GO:0016021
            EMBL:CP002686 GO:GO:0006886 PANTHER:PTHR12701 KO:K14009
            EMBL:AB024036 HOGENOM:HOG000239029 EMBL:BT024796 EMBL:AK175433
            IPI:IPI00532237 RefSeq:NP_566662.1 UniGene:At.38237
            EnsemblPlants:AT3G20450.1 GeneID:821590 KEGG:ath:AT3G20450
            TAIR:At3g20450 InParanoid:Q9LTP7 OMA:SLFLAMM PhylomeDB:Q9LTP7
            ProtClustDB:CLSN2688597 Genevestigator:Q9LTP7 Uniprot:Q9LTP7
        Length = 137

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 53/133 (39%), Positives = 75/133 (56%)

Query:     1 MQQLLFTVMFSEMALIMVLLFKTPLRKLLIMSLDXXXXXXXXXXXXXXXXXXXXMLISSV 60
             M QLLFT++  E  LI+ L F TP R++++  LD                    +  S +
Sbjct:     5 MFQLLFTIVTIEAVLILTLGFGTPARRVVVKLLDLSKQGRAPLVAKTVAATMLVLFGSVM 64

Query:    61 YNIMMIQKRWIDDEGAVVNPTDQVLLANHLLEATLMGASLFLAFMIDRLHHYIRELRIRR 120
             ++ + I  R + + G V N TDQV+ AN LLEA LMG  LFLA +IDR+H+Y REL+I R
Sbjct:    65 FSTIQIHTR-VSESGGVANSTDQVMFANRLLEAFLMGTVLFLAMVIDRMHYYTRELQITR 123

Query:   121 KTME-AIKNQSRG 132
             + +E A+K    G
Sbjct:   124 RNLEIAVKKGKTG 136


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.131   0.361    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      308       254   0.00084  114 3  10 22  0.40    33
                                                     32  0.47    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  616 (65 KB)
  Total size of DFA:  242 KB (2132 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.31u 0.09s 24.40t   Elapsed:  00:00:01
  Total cpu time:  24.31u 0.09s 24.40t   Elapsed:  00:00:01
  Start:  Fri May 10 09:09:10 2013   End:  Fri May 10 09:09:11 2013

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