BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021727
(308 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5R8H3|BAP31_PONAB B-cell receptor-associated protein 31 OS=Pongo abelii GN=BCAP31
PE=2 SV=3
Length = 246
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 143 EIKALEDQMTTLKLKLKDLESELETKSKEANAAETNAVALRKQSEGFLFEYDRLLEENQN 202
E+K LE++ +LK L+ L+ EL + ++ AE +A+RKQSEG EYDRLLEE+
Sbjct: 174 EVK-LEEENRSLKADLQKLKDELASTKQKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAK 232
Query: 203 LR 204
L+
Sbjct: 233 LQ 234
>sp|P51572|BAP31_HUMAN B-cell receptor-associated protein 31 OS=Homo sapiens GN=BCAP31
PE=1 SV=3
Length = 246
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 143 EIKALEDQMTTLKLKLKDLESELETKSKEANAAETNAVALRKQSEGFLFEYDRLLEENQN 202
E+K LE++ +LK L+ L+ EL + ++ AE +A+RKQSEG EYDRLLEE+
Sbjct: 174 EVK-LEEENRSLKADLQKLKDELASTKQKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAK 232
Query: 203 LR 204
L+
Sbjct: 233 LQ 234
>sp|Q61335|BAP31_MOUSE B-cell receptor-associated protein 31 OS=Mus musculus GN=Bcap31
PE=1 SV=4
Length = 245
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 149 DQMTTLKLKLKDLESELETKSKEANAAETNAVALRKQSEGFLFEYDRLLEENQNLR 204
++ +LK L+ L+ EL + K+ AE A+A++KQSEG EYDRLLEE+ L+
Sbjct: 178 EENKSLKNDLRKLKDELASTKKKLEKAENEALAMQKQSEGLTKEYDRLLEEHAKLQ 233
>sp|Q9ERA5|SMC4_MICAR Structural maintenance of chromosomes protein 4 (Fragment)
OS=Microtus arvalis GN=SMC4 PE=2 SV=1
Length = 1243
Score = 38.9 bits (89), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 12/114 (10%)
Query: 125 AIKNQSRGF---EDGKAASSEEIKALEDQMTTLKLKLKDLESELETKSKEANAAETNAVA 181
AIK R +D + +EIK E + LK +LK +E + E K+ NAAE +
Sbjct: 881 AIKTADRNLIKAQDSVVRTEKEIKDTEKETNDLKAELKAIEDKAEEVIKKTNAAEESLPE 940
Query: 182 LRKQSEGFLFEYDRLLEENQN--------LRNQLQSLDWRLSHSDFRTVYWNAE 227
++K+ L E ++++EN++ ++ +L+ +D ++ + + YW E
Sbjct: 941 IQKEHRNLLQEL-KVIQENEHALQKDALSIKLKLEQIDGHIAEHNSKIKYWQKE 993
>sp|Q8CG47|SMC4_MOUSE Structural maintenance of chromosomes protein 4 OS=Mus musculus
GN=Smc4 PE=1 SV=1
Length = 1286
Score = 38.1 bits (87), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 12/114 (10%)
Query: 125 AIKNQSRGF---EDGKAASSEEIKALEDQMTTLKLKLKDLESELETKSKEANAAETNAVA 181
AIK R +D + +EIK E ++ LK +LK++E + E AET+
Sbjct: 924 AIKTADRNLKKAQDSVCRTEKEIKDTEKEINDLKTELKNIEDKAEEVINNTKTAETSLPE 983
Query: 182 LRKQSEGFLFEYDRLLEENQN--------LRNQLQSLDWRLSHSDFRTVYWNAE 227
++K+ L E ++++EN++ ++ +L+ +D +S + + YW E
Sbjct: 984 IQKEHRNLLQEL-KVIQENEHALQKDALSIKLKLEQIDGHISEHNSKIKYWQKE 1036
>sp|O15021|MAST4_HUMAN Microtubule-associated serine/threonine-protein kinase 4 OS=Homo
sapiens GN=MAST4 PE=1 SV=3
Length = 2626
Score = 37.7 bits (86), Expect = 0.11, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 89 HLLEATLMGASLFLAFMIDRLHHYIRELRIRRKTMEAIKNQSRGFEDGKAASSEEIKALE 148
+LLEA A D + I +L + + +E + + ++ G A + E +++
Sbjct: 498 YLLEAAEGHAKEGQGIKTDIPRYIISQLGLNKDPLEEMAHLGN-YDSGTAETPETDESVS 556
Query: 149 DQMTTLKLKLKDLESELETKSKEANAAETNAVALRKQSEGFLFEYDRLLEENQNLRNQLQ 208
+LKL+ K ES+ ET +N A +R + F ++ ++N LRNQ+Q
Sbjct: 557 SSNASLKLRRKPRESDFETIKLISNGAYGAVYFVRHKESRQRFAMKKINKQNLILRNQIQ 616
>sp|P41229|KDM5C_HUMAN Lysine-specific demethylase 5C OS=Homo sapiens GN=KDM5C PE=1 SV=2
Length = 1560
Score = 37.4 bits (85), Expect = 0.13, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 104 FMIDRLHHYIRELRIRRKTMEAIKNQSR---GFEDGKAASSEEIKALEDQMTTLKLKLKD 160
+ +D L + +L++R ++ + N+ R EDG+ S EE++ALE + + +
Sbjct: 751 YTLDELPAMLHKLKVRAESFDTWANKVRVALEVEDGRKRSLEELRALESEARERRFPNSE 810
Query: 161 LESELETKSKEANAAETNAVALRKQSEG 188
L +L+ EA A + A+ L E
Sbjct: 811 LLQQLKNCLSEAEACVSRALGLVSGQEA 838
>sp|A1YVX4|KDM5C_PIG Lysine-specific demethylase 5C OS=Sus scrofa GN=KDM5C PE=2 SV=1
Length = 1516
Score = 37.0 bits (84), Expect = 0.21, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 104 FMIDRLHHYIRELRIRRKTMEAIKNQSR---GFEDGKAASSEEIKALEDQMTTLKLKLKD 160
+ +D L + +L++R ++ + N+ R EDG+ S EE++ALE + + +
Sbjct: 710 YTLDELPAMLHKLKVRAESFDTWANKVRVALEVEDGRKRSLEELRALESEARERRFPNSE 769
Query: 161 LESELETKSKEANAAETNAVALRKQSEG 188
L L+ EA A + A+ L E
Sbjct: 770 LLQRLKNCLSEAEACVSRALGLVSGQEA 797
>sp|Q38JA7|KDM5C_CANFA Lysine-specific demethylase 5C OS=Canis familiaris GN=KDM5C PE=2
SV=1
Length = 1556
Score = 36.6 bits (83), Expect = 0.23, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 104 FMIDRLHHYIRELRIRRKTMEAIKNQSR---GFEDGKAASSEEIKALEDQMTTLKLKLKD 160
+ +D L + +L++R ++ + N+ R EDG+ S EE++ALE + + +
Sbjct: 751 YTLDELPAMLHKLKVRAESFDTWANKVRVALEVEDGRKRSLEELRALESEARERRFPNSE 810
Query: 161 LESELETKSKEANAAETNAVALRKQSEG 188
L L+ EA A + A+ L E
Sbjct: 811 LLQRLKNCLSEAEACVSRALGLVSGQEA 838
>sp|Q54K74|YETL_DICDI Endoplasmic reticulum transmembrane protein YET-like
OS=Dictyostelium discoideum GN=DDB_G0287543 PE=3 SV=2
Length = 206
Score = 36.2 bits (82), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 23/203 (11%)
Query: 4 LLFTVMFSEMALIMVLLFKTP----LRKLLIMSLDRVKRGR-GPVVVKTVAGTVLVMLIS 58
L+F V+ E ++ F P LRK + LD++ G+ + +K +A V+++
Sbjct: 7 LVFLVLLVE--IVFCTFFMLPVSMHLRKNVYNKLDKLFGGQNAKIFLKVLALLVIIVFCD 64
Query: 59 SVYNIMMIQKRWIDDE--GAVVNPTDQVL-LANHLLEATLMGASLFLAFMIDRLHHYIRE 115
S+ N I K+ E GA + ++ + + + + G L+L F+I R I +
Sbjct: 65 SIVNSYNINKKLHTPELTGAKFDRQNEYTRMFRYQRNSYICGFCLYLFFLIYRSQGIISQ 124
Query: 116 LRIRRKTMEAIKNQSRGFEDGKAASSEEIKALEDQMTTLKLKLKDLES-ELETKSKEANA 174
L + AI+ Q++ + ++ L + LK ++KDL+ E E K+ ++ A
Sbjct: 125 LSNVEASKTAIEKQTKN-------NLNTVETLLSENEKLKTEIKDLKKMEKEHKAMKSQA 177
Query: 175 AETNAVALRKQSEGFLFEYDRLL 197
T L+ Q EY++LL
Sbjct: 178 ENTTKEYLKLQE-----EYNQLL 195
>sp|Q811L6|MAST4_MOUSE Microtubule-associated serine/threonine-protein kinase 4 OS=Mus
musculus GN=Mast4 PE=1 SV=3
Length = 2618
Score = 35.8 bits (81), Expect = 0.43, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 89 HLLEATLMGASLFLAFMIDRLHHYIRELRIRRKTMEAIKNQSRGFEDGKAASSEEIKALE 148
+LLEA A D + I +L + + +E + Q ++ A + E +++
Sbjct: 493 YLLEAAEGHAKEGQGIKTDIPRYIISQLGLNKDPLEEMA-QLGNYDSRTAETPEMDESVS 551
Query: 149 DQMTTLKLKLKDLESELETKSKEANAAETNAVALRKQSEGFLFEYDRLLEENQNLRNQLQ 208
T+L+L+ K ES+ ET +N A +R + F ++ ++N LRNQ+Q
Sbjct: 552 SSNTSLRLRRKPRESDFETIKLISNGAYGAVYFVRHKESRQRFAMKKINKQNLILRNQIQ 611
>sp|Q9NTJ3|SMC4_HUMAN Structural maintenance of chromosomes protein 4 OS=Homo sapiens
GN=SMC4 PE=1 SV=2
Length = 1288
Score = 35.8 bits (81), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 57/114 (50%), Gaps = 12/114 (10%)
Query: 125 AIKNQSRGFEDGKAA---SSEEIKALEDQMTTLKLKLKDLESELETKSKEANAAETNAVA 181
AIK R + + + + +EIK E ++ L +LK LE + K NAAE +
Sbjct: 926 AIKTADRNLQKAQDSVLRTEKEIKDTEKEVDDLTAELKSLEDKAAEVVKNTNAAEESLPE 985
Query: 182 LRKQSEGFLFEYDRLLEENQN--------LRNQLQSLDWRLSHSDFRTVYWNAE 227
++K+ L E ++++EN++ ++ +L+ +D ++ + + YW+ E
Sbjct: 986 IQKEHRNLLQEL-KVIQENEHALQKDALSIKLKLEQIDGHIAEHNSKIKYWHKE 1038
>sp|Q336R3|BRE1B_ORYSJ E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp.
japonica GN=BRE1B PE=2 SV=1
Length = 844
Score = 35.4 bits (80), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 FMIDRLHHYIRELRIRRKTMEAIKNQSRGF---EDGKAASSEEIKALEDQMTTLKLKLKD 160
+ D+LHH E+ R +E ++N+ E+ A +E + A++ +TT K K++D
Sbjct: 326 ILSDQLHHLNAEIERYRGLVEVLQNEKDQLMQKEEEMLAKAESVDAVQQSITTYKAKIED 385
Query: 161 LESELETKSKEANAAETNA 179
LE E++ E N E A
Sbjct: 386 LEHEIQKLMAEKNDLEIKA 404
>sp|A2ZAC2|BRE1B_ORYSI E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp.
indica GN=BRE1B PE=3 SV=2
Length = 844
Score = 35.4 bits (80), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 FMIDRLHHYIRELRIRRKTMEAIKNQSRGF---EDGKAASSEEIKALEDQMTTLKLKLKD 160
+ D+LHH E+ R +E ++N+ E+ A +E + A++ +TT K K++D
Sbjct: 326 ILSDQLHHLNAEIERYRGLVEVLQNEKDQLMQKEEEMLAKAESVDAVQQSITTYKAKIED 385
Query: 161 LESELETKSKEANAAETNA 179
LE E++ E N E A
Sbjct: 386 LEHEIQKLMAEKNDLEIKA 404
>sp|Q54G14|Y0266_DICDI Uncharacterized protein DDB_G0290685 OS=Dictyostelium discoideum
GN=DDB_G0290685 PE=2 SV=2
Length = 1081
Score = 34.7 bits (78), Expect = 1.0, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 105 MIDRLHHYIRELRIRRKTMEAIKNQSRGFEDGKAASSE---EIKALEDQMTTLKLKLKDL 161
++ + H I E R+ E + +++ D + + E+ L ++ T +K+
Sbjct: 11 IVPSVTHAIEENNKNREIQEKRQKETKDRNDRMVQNQKDRKEMIGLTNEKQTYSNSVKNA 70
Query: 162 ESELETKSKEANAAETNA--VALRKQSEGFLFEYDRLLEENQNLRNQLQSL 210
+++ E K + +TN+ + K+ G + EY RL+EEN+NL ++
Sbjct: 71 KTDNEKKIFQNLLDKTNSRITDIEKRQSGDISEYKRLVEENKNLEKNVKEF 121
>sp|Q486J6|GCSP1_COLP3 Glycine dehydrogenase [decarboxylating] 1 OS=Colwellia
psychrerythraea (strain 34H / ATCC BAA-681) GN=gcvP1
PE=3 SV=1
Length = 965
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 142 EEIKALEDQMTTLKLKLKDLESELETKSKEANAAETNAVA-LRKQSEGFL-FEYDRLLEE 199
E + AL D++ ++L DL + E+K++ A+ AVA L K ++ ++ Y L
Sbjct: 41 ESVDALIDEIVPSDIRLADLPNVEESKTEVQALADLKAVASLNKVNDTYIGLGYFGTLTP 100
Query: 200 NQNLRNQLQSLDWRLSHSDFR 220
N LRN L++ W +++ ++
Sbjct: 101 NVILRNVLENPGWYTAYTPYQ 121
>sp|Q96ST8|CEP89_HUMAN Centrosomal protein of 89 kDa OS=Homo sapiens GN=CEP89 PE=1 SV=3
Length = 783
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 20/143 (13%)
Query: 118 IRRKTMEAIKNQSRGFEDGKAASSEEIKALEDQMTTLKLKLKDLESELETKSKEANAAET 177
I R+ EA+K ++ + + + E+ ++ M L+LKLK +E E + K KEA A +
Sbjct: 235 ITREKFEALKEENMDLNNMNQSLTLELNTMKQAMKELQLKLKGMEKE-KRKLKEAEKASS 293
Query: 178 NAVA------LRKQSEGFLFEYDRLLEENQNLRNQLQSLDWRLS--HSDFRTV----YWN 225
VA LRKQ++ L++EN L+ + L+ LS + FR + N
Sbjct: 294 QEVAAPELLYLRKQAQ-------ELVDENDGLKMTVHRLNVELSRYQTKFRHLSKEESLN 346
Query: 226 AEKTASSTYCAAKVLDFELLTKL 248
E S +LD + L+ L
Sbjct: 347 IEGLPSKGPIPPWLLDIKYLSPL 369
>sp|O14290|YF14_SCHPO Uncharacterized protein C9E9.04 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC9E9.04 PE=4 SV=1
Length = 188
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 29/195 (14%)
Query: 4 LLFTVMFSEMALIMVLLFKTPL---RKLLIMSLDRVKRGRGPVVVKTVAGTVLVMLISSV 60
++F ++ E+ ++L PL R +L + GR V+K +L++ SV
Sbjct: 7 IVFMLLMVEIVSFVILSLPLPLKVRRAILNAISNSPFAGRVKHVLKITIICILILFADSV 66
Query: 61 YNIMMIQKRWIDDEGAVVNPT-----------DQVLLANHLLEATLMGASLFLAFMIDRL 109
++ + K + + A+ P+ Q +L L G++LFL+ +++R
Sbjct: 67 RRVVRVTKEY---DLAIAAPSTTESARSGYKASQFYAQRNLY---LCGSALFLSLVVNRY 120
Query: 110 HHYIRELRIRRKTMEAIKNQSRGFEDGKAASSEEIKALEDQMTTLKLKLKDLESELETKS 169
+ + + + M+A++ Q AS+ KA+E+ + TL+ KL+ + E ET +
Sbjct: 121 YLALEAMIAAQDKMQALQTQVE-------ASTNNAKAVEE-LETLRTKLETRDKEYETLA 172
Query: 170 KEANAAETNAVALRK 184
E AA T V +K
Sbjct: 173 -EKYAAVTKTVEKKK 186
>sp|Q5R9U7|BAP29_PONAB B-cell receptor-associated protein 29 OS=Pongo abelii GN=BCAP29
PE=2 SV=1
Length = 241
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 129 QSRGFEDGKAASSEEIKALEDQMTTLKLKLKDLESELETKSKEANAAETNAVALRKQSEG 188
+S G ++ +E K +EDQ + L++EL S + A+ + + ++ QSE
Sbjct: 163 KSHGKDEECVLEAENKKLVEDQ--------QKLKTELRKTSDALSKAQNDVMEMKMQSER 214
Query: 189 FLFEYDRLLEENQNLRNQLQ 208
EYD+LL+E+ L+++L+
Sbjct: 215 LSKEYDQLLKEHSELQDRLE 234
>sp|Q0VBY1|ODF2L_BOVIN Outer dense fiber protein 2-like OS=Bos taurus GN=ODF2L PE=2 SV=1
Length = 548
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 132 GFEDGKAASSEEIKALEDQMTTLKLKLKDLESELETKSKEANAAETNAVALRKQSEGFLF 191
E+G+ SEEI+ + + L++K+ DLE+EL K++E N + + E L
Sbjct: 457 ALEEGRQKVSEEIEKMSSRERALQVKIVDLENELRKKNEEQNQLVCKMNSKAQHQEVCLK 516
Query: 192 EYDRLLE--ENQN--LRNQLQSL 210
E LE ENQN ++N LQ L
Sbjct: 517 EIQHSLEKSENQNESIKNYLQFL 539
>sp|P41230|KDM5C_MOUSE Lysine-specific demethylase 5C OS=Mus musculus GN=Kdm5c PE=2 SV=4
Length = 1554
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 104 FMIDRLHHYIRELRIRRKTMEAIKNQSR---GFEDGKAASSEEIKALEDQMTTLKLKLKD 160
+ +D L + +L++R ++ + N+ R EDG+ S EE++ALE + + +
Sbjct: 751 YTLDELPAMLHKLKVRAESFDTWANKVRVALEVEDGRKRSLEELRALESEARERRFPNSE 810
Query: 161 LESELETKSKEANAAETNAVAL 182
L L+ EA A + A+ L
Sbjct: 811 LLQRLKNCLSEAEACVSRALGL 832
>sp|Q61334|BAP29_MOUSE B-cell receptor-associated protein 29 OS=Mus musculus GN=Bcap29
PE=1 SV=1
Length = 240
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 160 DLESELETKSKEANAAETNAVALRKQSEGFLFEYDRLLEENQNLRNQLQ 208
+L++EL+ S A+ + + ++ QSE EYDRLL+E+ L+N+L+
Sbjct: 185 NLKTELKKASDALLKAQNDVMTMKIQSERLSKEYDRLLKEHSELQNRLE 233
>sp|Q30DN6|KDM5D_CANFA Lysine-specific demethylase 5D OS=Canis familiaris GN=KDM5D PE=2
SV=1
Length = 1545
Score = 32.3 bits (72), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Query: 104 FMIDRLHHYIRELRIRRKTMEAIKNQSR---GFEDGKAASSEEIKALEDQMTTLKLKLKD 160
+ +D L + +L+IR ++ + N+ R EDG+ S EE++ALE + + +
Sbjct: 744 YTLDELPAMLHKLKIRAESFDTWANKVRVALEVEDGRKRSFEELRALESEARERRFPNSE 803
Query: 161 LESELETKSKEANAAETNAVALRKQSEGFLFEYDRLLEENQNLRNQLQSL 210
L L EA A + + L E + L E + L Q+ SL
Sbjct: 804 LLQRLRNCMHEAEACVSQVLGLVSGQEARIQTSPLTLTELRVLLEQMSSL 853
>sp|Q62240|KDM5D_MOUSE Lysine-specific demethylase 5D OS=Mus musculus GN=Kdm5d PE=2 SV=2
Length = 1548
Score = 32.3 bits (72), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 104 FMIDRLHHYIRELRIRRKTMEAIKNQSRG---FEDGKAASSEEIKALEDQMTTLKLKLKD 160
+ +D L +++L+IR ++ + N+ + EDG+ S EE++ALE + + +
Sbjct: 750 YTLDELPAMLQKLKIRAESFDNWANKVQAALEVEDGRKRSFEELRALESEARDRRFPNSE 809
Query: 161 LESELETKSKEANAAETNAVALRKQSEGFLFEYDRLLEENQNLRNQLQSLDWRLSHSD 218
L L+ EA A + + L SE L L E Q L Q+ +L + D
Sbjct: 810 LLQRLKKCLTEAEACISQVLGLISNSEDRLQTPQITLTELQLLLKQMGTLPCTMHQID 867
>sp|Q9UHQ4|BAP29_HUMAN B-cell receptor-associated protein 29 OS=Homo sapiens GN=BCAP29
PE=1 SV=2
Length = 241
Score = 32.3 bits (72), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 129 QSRGFEDGKAASSEEIKALEDQMTTLKLKLKDLESELETKSKEANAAETNAVALRKQSEG 188
+S G ++ +E K +EDQ + L++EL S + A+ + + ++ QSE
Sbjct: 163 KSHGKDEECVLEAENKKLVEDQ--------EKLKTELRKTSDALSKAQNDVMEMKMQSER 214
Query: 189 FLFEYDRLLEENQNLRNQLQ 208
EYD+LL+E+ L+++L+
Sbjct: 215 LSKEYDQLLKEHSELQDRLE 234
>sp|Q05000|MYS_PODCA Myosin heavy chain (Fragment) OS=Podocoryne carnea PE=2 SV=1
Length = 692
Score = 31.6 bits (70), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%)
Query: 145 KALEDQMTTLKLKLKDLESELETKSKEANAAETNAVALRKQSEGFLFEYDRLLEENQNLR 204
K ++ Q+ KLK +++++L+ ++A T + +R SE + +YD L +EN+ L
Sbjct: 186 KKVDQQINEWKLKCDEIQADLDKAQRDARGYSTELLKVRTASEDTIEKYDALKKENRALS 245
Query: 205 NQLQSLDWRLS 215
+LQS+ +LS
Sbjct: 246 AELQSVTEQLS 256
>sp|A2AM05|CNTLN_MOUSE Centlein OS=Mus musculus GN=Cntln PE=1 SV=1
Length = 1397
Score = 31.2 bits (69), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 18/133 (13%)
Query: 104 FMIDRLHHYIRELRIRRKTMEAIKNQSRGFEDGKAASSEEIKALEDQMTTLKLKLKDLES 163
F+ L HY + R K +E + S+ E K+ +I ALE ++TTL+ ++
Sbjct: 717 FLKSHLKHYQEDSEAREKELEQLLRVSKDVEHDKSELQTKITALETEVTTLRRQV----- 771
Query: 164 ELETKSKEANAAETNAVALRKQSEGFLFEYDRLLEENQNLRNQLQSLDWRLSHSDFRTVY 223
T A ALR + E + +R ++++ + D R D +T
Sbjct: 772 -------------TEAKALRGKDEEVVCPEERAHRPTDKAKSEMATTDVRARRCDCKTAT 818
Query: 224 WNAEKTASSTYCA 236
+ A+ C+
Sbjct: 819 TKVKFKAAKRKCS 831
>sp|Q9ULJ1|ODF2L_HUMAN Outer dense fiber protein 2-like OS=Homo sapiens GN=ODF2L PE=2 SV=2
Length = 636
Score = 31.2 bits (69), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 132 GFEDGKAASSEEIKALEDQMTTLKLKLKDLESELETKSKEAN 173
E+G+ +EEI+ + + + L++K+ DLE+EL K++E N
Sbjct: 582 ALEEGRQKVAEEIEKMSSRESALQIKILDLETELRKKNEEQN 623
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.130 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,402,050
Number of Sequences: 539616
Number of extensions: 3369035
Number of successful extensions: 18703
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 309
Number of HSP's that attempted gapping in prelim test: 16826
Number of HSP's gapped (non-prelim): 2102
length of query: 308
length of database: 191,569,459
effective HSP length: 117
effective length of query: 191
effective length of database: 128,434,387
effective search space: 24530967917
effective search space used: 24530967917
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)