Query 021730
Match_columns 308
No_of_seqs 246 out of 2556
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 05:13:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021730.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021730hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF06028 DUF915: Alpha/beta hy 99.9 1.3E-20 2.8E-25 165.5 17.3 168 25-194 8-197 (255)
2 COG2267 PldB Lysophospholipase 99.7 1.4E-15 3E-20 137.6 15.7 110 29-151 35-144 (298)
3 COG4814 Uncharacterized protei 99.7 9.3E-15 2E-19 124.6 18.7 167 26-195 43-230 (288)
4 PF07819 PGAP1: PGAP1-like pro 99.7 5.2E-15 1.1E-19 128.5 16.0 146 27-191 3-167 (225)
5 PHA02857 monoglyceride lipase; 99.6 9.1E-15 2E-19 130.6 15.9 111 26-149 23-133 (276)
6 PLN02385 hydrolase; alpha/beta 99.6 2.3E-14 5E-19 132.7 16.5 110 26-148 85-197 (349)
7 PLN02298 hydrolase, alpha/beta 99.6 2.5E-14 5.4E-19 131.3 15.7 109 27-148 58-169 (330)
8 PLN03087 BODYGUARD 1 domain co 99.6 9.1E-14 2E-18 132.8 17.5 110 27-152 200-313 (481)
9 KOG1454 Predicted hydrolase/ac 99.6 8E-14 1.7E-18 127.5 14.9 112 26-153 56-171 (326)
10 TIGR03343 biphenyl_bphD 2-hydr 99.5 9.6E-14 2.1E-18 124.0 14.1 106 26-148 28-136 (282)
11 PRK00870 haloalkane dehalogena 99.5 9.2E-14 2E-18 126.0 12.1 105 27-147 45-149 (302)
12 PLN02211 methyl indole-3-aceta 99.5 1.3E-13 2.8E-18 123.5 12.5 105 26-146 16-120 (273)
13 PLN02965 Probable pheophorbida 99.5 1.1E-13 2.4E-18 122.4 11.7 102 29-147 4-106 (255)
14 PRK10749 lysophospholipase L2; 99.5 2.2E-13 4.8E-18 125.2 14.2 115 26-148 52-166 (330)
15 TIGR03611 RutD pyrimidine util 99.5 3.5E-13 7.5E-18 117.6 13.5 102 27-146 12-113 (257)
16 TIGR02240 PHA_depoly_arom poly 99.5 9E-14 1.9E-18 124.3 9.8 104 27-149 24-127 (276)
17 TIGR02427 protocat_pcaD 3-oxoa 99.5 1.7E-13 3.8E-18 118.5 10.8 103 27-148 12-114 (251)
18 PRK11126 2-succinyl-6-hydroxy- 99.5 3E-13 6.5E-18 118.1 12.0 101 28-148 2-102 (242)
19 PRK11071 esterase YqiA; Provis 99.5 1.6E-12 3.4E-17 110.2 15.5 88 29-148 2-93 (190)
20 TIGR01607 PST-A Plasmodium sub 99.5 2.6E-12 5.6E-17 118.3 18.2 114 26-148 19-185 (332)
21 PRK03592 haloalkane dehalogena 99.5 3.3E-13 7.1E-18 121.8 11.6 103 27-148 26-128 (295)
22 PLN02824 hydrolase, alpha/beta 99.5 3.7E-13 8E-18 121.4 11.6 109 28-148 29-137 (294)
23 PF12697 Abhydrolase_6: Alpha/ 99.4 1E-12 2.2E-17 111.6 10.7 102 31-149 1-102 (228)
24 PRK10673 acyl-CoA esterase; Pr 99.4 1.5E-12 3.3E-17 114.4 11.6 102 25-146 13-114 (255)
25 PLN02679 hydrolase, alpha/beta 99.4 1.5E-12 3.3E-17 121.1 11.8 105 27-148 87-191 (360)
26 KOG4409 Predicted hydrolase/ac 99.4 1.6E-12 3.5E-17 116.3 10.8 106 26-146 88-193 (365)
27 KOG1455 Lysophospholipase [Lip 99.4 9.9E-12 2.1E-16 109.3 15.1 109 25-146 51-162 (313)
28 PLN02652 hydrolase; alpha/beta 99.4 4.3E-12 9.4E-17 119.2 13.6 110 26-148 134-245 (395)
29 PRK14875 acetoin dehydrogenase 99.4 1.6E-11 3.5E-16 114.1 17.2 105 26-149 129-233 (371)
30 PRK10985 putative hydrolase; P 99.4 4.4E-12 9.5E-17 116.3 13.0 113 26-151 56-171 (324)
31 TIGR03101 hydr2_PEP hydrolase, 99.4 7.1E-12 1.5E-16 111.3 13.9 107 27-148 24-134 (266)
32 PF01674 Lipase_2: Lipase (cla 99.4 1.4E-12 3.1E-17 112.0 9.1 111 28-152 1-127 (219)
33 TIGR03695 menH_SHCHC 2-succiny 99.4 4.4E-12 9.5E-17 109.3 12.1 103 28-147 1-104 (251)
34 PRK03204 haloalkane dehalogena 99.4 2.5E-12 5.4E-17 115.9 10.8 105 26-148 32-136 (286)
35 PRK10349 carboxylesterase BioH 99.4 4.8E-12 1E-16 111.7 11.8 95 29-147 14-108 (256)
36 PLN02578 hydrolase 99.4 5.5E-12 1.2E-16 117.1 11.3 102 26-146 84-185 (354)
37 PRK13604 luxD acyl transferase 99.3 9.7E-11 2.1E-15 105.2 18.3 104 25-148 34-140 (307)
38 COG1647 Esterase/lipase [Gener 99.3 1.4E-11 3.1E-16 103.6 11.9 110 26-152 13-122 (243)
39 PLN02511 hydrolase 99.3 1.2E-11 2.6E-16 116.2 12.4 111 26-149 98-211 (388)
40 TIGR01836 PHA_synth_III_C poly 99.3 1.3E-11 2.8E-16 114.4 11.9 109 26-151 60-174 (350)
41 TIGR03056 bchO_mg_che_rel puta 99.3 1.3E-11 2.9E-16 109.4 11.0 105 27-149 27-131 (278)
42 PLN02894 hydrolase, alpha/beta 99.3 3.3E-11 7.1E-16 113.8 13.9 109 26-148 103-211 (402)
43 PLN03084 alpha/beta hydrolase 99.3 1.8E-11 3.9E-16 114.5 11.4 108 27-149 126-233 (383)
44 PF05057 DUF676: Putative seri 99.3 3.3E-11 7.1E-16 104.3 11.7 115 26-154 2-131 (217)
45 KOG4178 Soluble epoxide hydrol 99.3 2.1E-11 4.5E-16 108.7 10.4 110 24-149 40-149 (322)
46 TIGR01250 pro_imino_pep_2 prol 99.3 6.4E-11 1.4E-15 104.7 12.5 106 27-147 24-130 (288)
47 PF12695 Abhydrolase_5: Alpha/ 99.3 7.5E-11 1.6E-15 94.5 11.4 92 30-146 1-93 (145)
48 PRK06489 hypothetical protein; 99.2 3.4E-11 7.3E-16 112.1 10.2 109 28-146 69-187 (360)
49 TIGR03100 hydr1_PEP hydrolase, 99.2 2.3E-10 5E-15 102.5 14.6 107 27-150 25-136 (274)
50 TIGR01738 bioH putative pimelo 99.2 2.5E-11 5.4E-16 104.6 8.0 95 28-146 4-98 (245)
51 PRK08775 homoserine O-acetyltr 99.2 5.9E-11 1.3E-15 109.7 9.0 101 28-148 57-173 (343)
52 PRK05077 frsA fermentation/res 99.2 1.2E-09 2.6E-14 103.4 17.7 106 27-149 193-301 (414)
53 PRK11460 putative hydrolase; P 99.2 1.9E-09 4E-14 94.3 17.6 116 26-146 14-136 (232)
54 TIGR01392 homoserO_Ac_trn homo 99.2 7.4E-11 1.6E-15 109.4 9.2 117 27-149 30-163 (351)
55 TIGR01838 PHA_synth_I poly(R)- 99.2 2.9E-10 6.4E-15 109.9 13.3 112 26-153 186-307 (532)
56 cd00707 Pancreat_lipase_like P 99.2 3.5E-10 7.7E-15 101.3 11.9 108 26-147 34-146 (275)
57 TIGR01249 pro_imino_pep_1 prol 99.1 1.7E-10 3.6E-15 104.9 9.4 104 28-148 27-130 (306)
58 PLN02733 phosphatidylcholine-s 99.1 2.7E-10 5.8E-15 107.8 9.8 97 39-153 105-206 (440)
59 PRK10566 esterase; Provisional 99.1 6.6E-10 1.4E-14 97.6 11.5 112 26-146 25-140 (249)
60 TIGR01839 PHA_synth_II poly(R) 99.1 1.3E-09 2.8E-14 104.8 12.5 114 25-154 212-334 (560)
61 PRK07868 acyl-CoA synthetase; 99.1 8.9E-10 1.9E-14 115.2 12.5 110 26-150 65-179 (994)
62 PF02450 LCAT: Lecithin:choles 99.1 7.2E-10 1.6E-14 104.1 10.6 91 43-153 66-165 (389)
63 TIGR03230 lipo_lipase lipoprot 99.1 2E-09 4.4E-14 101.5 13.4 107 26-146 39-152 (442)
64 PRK00175 metX homoserine O-ace 99.0 1.1E-09 2.3E-14 102.7 9.8 116 27-148 47-182 (379)
65 KOG3724 Negative regulator of 99.0 5.1E-09 1.1E-13 101.9 14.2 158 25-191 86-266 (973)
66 PRK07581 hypothetical protein; 99.0 6E-10 1.3E-14 102.7 7.7 114 29-148 42-159 (339)
67 PLN02980 2-oxoglutarate decarb 99.0 1.6E-09 3.4E-14 117.8 11.6 109 27-146 1370-1478(1655)
68 PLN02606 palmitoyl-protein thi 99.0 6.9E-09 1.5E-13 92.3 13.6 108 27-152 25-136 (306)
69 COG1075 LipA Predicted acetylt 99.0 8.5E-10 1.8E-14 101.6 8.2 108 27-153 58-169 (336)
70 KOG4667 Predicted esterase [Li 99.0 8.9E-09 1.9E-13 86.4 13.2 109 24-148 29-139 (269)
71 PLN00021 chlorophyllase 99.0 3.4E-09 7.3E-14 96.6 11.8 109 25-146 49-164 (313)
72 TIGR01840 esterase_phb esteras 99.0 7.2E-09 1.6E-13 89.2 12.9 115 26-148 11-130 (212)
73 PLN02872 triacylglycerol lipas 99.0 8.3E-10 1.8E-14 103.6 6.7 116 26-147 72-196 (395)
74 KOG2382 Predicted alpha/beta h 99.0 3.8E-09 8.2E-14 94.4 9.8 108 26-148 50-160 (315)
75 TIGR03502 lipase_Pla1_cef extr 99.0 6.6E-09 1.4E-13 103.9 12.3 105 28-132 449-575 (792)
76 PRK05855 short chain dehydroge 98.9 3.1E-09 6.6E-14 104.5 9.5 107 27-148 24-131 (582)
77 COG0429 Predicted hydrolase of 98.9 1.1E-08 2.3E-13 91.5 10.8 115 23-150 70-187 (345)
78 PLN02633 palmitoyl protein thi 98.9 3.2E-08 6.8E-13 88.3 13.1 109 26-152 23-135 (314)
79 PF00975 Thioesterase: Thioest 98.9 1.8E-08 3.8E-13 87.4 10.9 102 29-148 1-104 (229)
80 KOG2564 Predicted acetyltransf 98.9 1.7E-08 3.8E-13 87.8 10.3 109 25-146 71-180 (343)
81 PF06821 Ser_hydrolase: Serine 98.9 5.8E-09 1.3E-13 86.7 7.3 89 31-148 1-91 (171)
82 KOG1838 Alpha/beta hydrolase [ 98.9 2.9E-08 6.2E-13 91.7 11.9 113 25-150 122-237 (409)
83 PF02089 Palm_thioest: Palmito 98.8 2.4E-08 5.3E-13 88.2 10.4 113 26-152 3-120 (279)
84 PF06057 VirJ: Bacterial virul 98.8 9.6E-08 2.1E-12 79.5 12.9 102 29-148 3-107 (192)
85 PLN02442 S-formylglutathione h 98.8 1.5E-07 3.2E-12 84.8 13.0 121 26-149 45-179 (283)
86 PF05728 UPF0227: Uncharacteri 98.7 4.5E-07 9.8E-12 76.4 14.5 88 31-148 2-91 (187)
87 TIGR02821 fghA_ester_D S-formy 98.7 3.4E-07 7.4E-12 82.0 13.7 120 27-148 41-173 (275)
88 PLN02517 phosphatidylcholine-s 98.7 3.3E-08 7.1E-13 94.8 7.1 97 43-152 157-267 (642)
89 PF05990 DUF900: Alpha/beta hy 98.7 1.7E-07 3.7E-12 81.9 10.9 112 25-146 15-135 (233)
90 COG0596 MhpC Predicted hydrola 98.7 1.4E-07 3.1E-12 80.7 10.3 102 28-149 21-124 (282)
91 KOG2541 Palmitoyl protein thio 98.7 2.6E-07 5.6E-12 80.1 11.3 106 29-152 24-132 (296)
92 PF02230 Abhydrolase_2: Phosph 98.7 6.3E-07 1.4E-11 77.3 13.5 122 24-148 10-140 (216)
93 PF00561 Abhydrolase_1: alpha/ 98.6 6.5E-08 1.4E-12 82.9 6.4 52 95-147 27-78 (230)
94 PRK06765 homoserine O-acetyltr 98.6 2.8E-07 6.1E-12 86.5 9.9 53 95-148 143-196 (389)
95 PF06342 DUF1057: Alpha/beta h 98.6 1.2E-06 2.6E-11 77.0 13.0 104 26-148 33-137 (297)
96 PF10230 DUF2305: Uncharacteri 98.6 9.4E-07 2E-11 78.8 12.7 112 28-146 2-120 (266)
97 KOG2624 Triglyceride lipase-ch 98.6 1.1E-07 2.4E-12 88.7 6.8 117 26-148 71-199 (403)
98 KOG2369 Lecithin:cholesterol a 98.5 8.2E-08 1.8E-12 89.4 5.2 95 42-152 124-229 (473)
99 PF00326 Peptidase_S9: Prolyl 98.5 2.6E-06 5.5E-11 73.2 13.9 95 44-148 3-99 (213)
100 COG3545 Predicted esterase of 98.5 1E-06 2.2E-11 72.1 9.9 57 89-151 41-97 (181)
101 TIGR00976 /NonD putative hydro 98.5 5.6E-07 1.2E-11 88.5 9.9 107 27-148 21-132 (550)
102 COG4782 Uncharacterized protei 98.5 8.5E-07 1.8E-11 80.3 10.1 115 25-150 113-235 (377)
103 COG3571 Predicted hydrolase of 98.5 2.6E-06 5.7E-11 68.5 11.5 112 29-152 15-128 (213)
104 PF08538 DUF1749: Protein of u 98.5 1.7E-06 3.8E-11 77.3 11.5 104 27-146 32-146 (303)
105 COG3243 PhaC Poly(3-hydroxyalk 98.4 1.3E-06 2.9E-11 80.5 9.8 114 24-153 103-222 (445)
106 COG3319 Thioesterase domains o 98.4 2.3E-06 4.9E-11 75.4 10.8 102 29-149 1-104 (257)
107 PF12740 Chlorophyllase2: Chlo 98.4 1.8E-06 3.9E-11 75.8 10.1 112 25-150 14-132 (259)
108 PRK10162 acetyl esterase; Prov 98.4 2.2E-06 4.7E-11 78.5 10.9 102 27-148 80-195 (318)
109 PF00151 Lipase: Lipase; Inte 98.4 1.2E-06 2.5E-11 80.5 8.0 108 26-146 69-185 (331)
110 PF07859 Abhydrolase_3: alpha/ 98.4 1.8E-06 3.8E-11 73.8 8.7 98 31-148 1-110 (211)
111 KOG1552 Predicted alpha/beta h 98.4 3.8E-06 8.3E-11 72.9 10.2 104 25-148 57-162 (258)
112 PF12146 Hydrolase_4: Putative 98.3 1.5E-06 3.3E-11 62.6 6.4 64 27-102 15-78 (79)
113 COG4757 Predicted alpha/beta h 98.3 3.6E-06 7.8E-11 71.7 7.7 109 26-146 28-136 (281)
114 PF01738 DLH: Dienelactone hyd 98.2 2.4E-06 5.3E-11 73.6 6.3 115 26-146 12-130 (218)
115 PRK10252 entF enterobactin syn 98.2 1.1E-05 2.3E-10 87.1 12.6 102 26-146 1066-1169(1296)
116 PF07224 Chlorophyllase: Chlor 98.2 5.3E-06 1.2E-10 72.0 7.1 115 22-150 40-158 (307)
117 COG0400 Predicted esterase [Ge 98.2 1.3E-05 2.7E-10 68.6 9.4 112 27-146 17-132 (207)
118 COG3208 GrsT Predicted thioest 98.2 1.2E-05 2.7E-10 69.3 9.3 105 25-146 4-110 (244)
119 COG2945 Predicted hydrolase of 98.1 3.2E-05 6.9E-10 64.3 9.8 106 25-149 25-138 (210)
120 COG0412 Dienelactone hydrolase 98.1 4.4E-05 9.5E-10 66.9 11.4 112 29-144 28-142 (236)
121 PF12048 DUF3530: Protein of u 98.1 0.00015 3.3E-09 66.1 14.6 123 24-148 83-229 (310)
122 TIGR01849 PHB_depoly_PhaZ poly 98.0 4.3E-05 9.4E-10 71.7 10.8 106 28-152 102-212 (406)
123 PF10503 Esterase_phd: Esteras 98.0 0.00011 2.5E-09 63.4 12.2 114 26-148 14-132 (220)
124 PF03403 PAF-AH_p_II: Platelet 98.0 1.5E-05 3.2E-10 74.6 6.5 116 26-148 98-262 (379)
125 COG2021 MET2 Homoserine acetyl 97.9 3.7E-05 8.1E-10 70.1 8.3 56 95-151 129-185 (368)
126 cd00741 Lipase Lipase. Lipase 97.9 5.3E-05 1.2E-09 61.6 8.4 58 94-151 10-70 (153)
127 PRK04940 hypothetical protein; 97.9 0.00015 3.2E-09 60.3 10.0 49 96-148 44-92 (180)
128 COG0657 Aes Esterase/lipase [L 97.8 0.00017 3.7E-09 65.7 10.1 102 25-146 76-189 (312)
129 PF06500 DUF1100: Alpha/beta h 97.6 0.00022 4.8E-09 66.6 8.3 107 26-149 188-297 (411)
130 COG4188 Predicted dienelactone 97.6 0.00018 3.8E-09 65.9 7.4 100 27-132 70-179 (365)
131 PF02273 Acyl_transf_2: Acyl t 97.6 0.00066 1.4E-08 58.7 10.2 106 23-144 25-130 (294)
132 PF01764 Lipase_3: Lipase (cla 97.6 0.00027 5.8E-09 56.2 7.4 57 94-150 46-107 (140)
133 KOG3967 Uncharacterized conser 97.5 0.0011 2.4E-08 56.1 10.4 137 25-174 98-251 (297)
134 PF06259 Abhydrolase_8: Alpha/ 97.5 0.0016 3.4E-08 54.3 10.9 57 95-152 91-148 (177)
135 COG3946 VirJ Type IV secretory 97.5 0.008 1.7E-07 55.6 16.1 86 27-130 259-344 (456)
136 KOG4372 Predicted alpha/beta h 97.5 9.5E-05 2.1E-09 68.1 3.5 116 22-152 74-198 (405)
137 KOG4627 Kynurenine formamidase 97.4 0.00045 9.8E-09 58.1 6.8 104 25-147 64-171 (270)
138 PF07082 DUF1350: Protein of u 97.4 0.0014 3E-08 57.1 10.0 105 26-150 15-127 (250)
139 smart00824 PKS_TE Thioesterase 97.4 0.0018 3.8E-08 54.4 10.5 95 33-146 2-100 (212)
140 COG1506 DAP2 Dipeptidyl aminop 97.4 0.00043 9.3E-09 69.2 7.5 107 29-147 395-506 (620)
141 cd00519 Lipase_3 Lipase (class 97.4 0.00067 1.4E-08 59.0 7.7 59 93-151 109-170 (229)
142 PF09752 DUF2048: Uncharacteri 97.4 0.0021 4.5E-08 58.7 10.8 114 25-146 89-208 (348)
143 PF12715 Abhydrolase_7: Abhydr 97.3 0.0019 4.1E-08 59.7 10.4 119 25-146 112-258 (390)
144 PF05448 AXE1: Acetyl xylan es 97.3 0.0045 9.7E-08 56.7 12.9 122 25-150 80-210 (320)
145 PF11339 DUF3141: Protein of u 97.3 0.006 1.3E-07 58.2 13.1 106 25-149 65-176 (581)
146 KOG4840 Predicted hydrolases o 97.2 0.0022 4.8E-08 54.6 8.6 103 27-145 35-141 (299)
147 KOG4391 Predicted alpha/beta h 97.2 0.00052 1.1E-08 58.2 4.8 103 25-144 75-180 (300)
148 PF00756 Esterase: Putative es 97.2 0.0031 6.8E-08 55.2 9.9 47 99-146 100-148 (251)
149 KOG3847 Phospholipase A2 (plat 97.1 0.00074 1.6E-08 60.3 5.2 42 21-62 110-152 (399)
150 COG3509 LpqC Poly(3-hydroxybut 97.1 0.0058 1.2E-07 54.4 10.7 115 26-147 59-178 (312)
151 COG3150 Predicted esterase [Ge 97.1 0.0056 1.2E-07 49.9 9.4 78 31-134 2-81 (191)
152 KOG3975 Uncharacterized conser 97.0 0.011 2.3E-07 51.4 11.3 112 26-144 27-143 (301)
153 PRK10439 enterobactin/ferric e 97.0 0.012 2.5E-07 55.9 12.6 36 112-148 288-323 (411)
154 PF05677 DUF818: Chlamydia CHL 97.0 0.0069 1.5E-07 55.0 10.4 93 25-133 134-236 (365)
155 PF03959 FSH1: Serine hydrolas 97.0 0.0097 2.1E-07 51.1 11.1 119 27-148 3-145 (212)
156 PLN02454 triacylglycerol lipas 97.0 0.0032 6.9E-08 59.0 8.0 58 94-151 208-273 (414)
157 PLN00413 triacylglycerol lipas 96.9 0.0045 9.7E-08 58.8 8.7 56 97-152 269-331 (479)
158 PF01083 Cutinase: Cutinase; 96.9 0.0025 5.4E-08 53.3 6.3 57 95-151 64-125 (179)
159 COG2819 Predicted hydrolase of 96.9 0.02 4.3E-07 50.5 12.0 55 91-146 113-170 (264)
160 KOG3253 Predicted alpha/beta h 96.9 0.0014 3.1E-08 63.1 5.3 109 27-152 175-290 (784)
161 PRK10115 protease 2; Provision 96.9 0.005 1.1E-07 62.3 9.2 108 26-144 443-555 (686)
162 KOG2565 Predicted hydrolases o 96.8 0.0042 9.1E-08 56.8 7.5 100 25-141 149-257 (469)
163 PF02129 Peptidase_S15: X-Pro 96.8 0.0089 1.9E-07 53.3 9.6 110 26-151 18-139 (272)
164 PLN02162 triacylglycerol lipas 96.8 0.0055 1.2E-07 58.0 8.3 57 96-152 262-325 (475)
165 PLN02934 triacylglycerol lipas 96.7 0.0069 1.5E-07 57.9 8.0 57 96-152 305-368 (515)
166 KOG3101 Esterase D [General fu 96.7 0.0025 5.4E-08 53.9 4.5 120 28-150 44-181 (283)
167 PLN02408 phospholipase A1 96.6 0.0095 2.1E-07 55.1 8.3 56 96-151 182-243 (365)
168 KOG2029 Uncharacterized conser 96.6 0.0047 1E-07 59.6 6.4 57 97-153 509-577 (697)
169 PLN02324 triacylglycerol lipas 96.5 0.011 2.5E-07 55.3 8.2 58 95-152 196-268 (415)
170 KOG1515 Arylacetamide deacetyl 96.4 0.075 1.6E-06 48.9 12.8 111 26-152 88-211 (336)
171 PLN02571 triacylglycerol lipas 96.4 0.01 2.2E-07 55.7 7.2 56 96-151 208-277 (413)
172 PF11187 DUF2974: Protein of u 96.4 0.01 2.2E-07 51.5 6.7 50 100-150 73-125 (224)
173 PF11288 DUF3089: Protein of u 96.3 0.01 2.2E-07 50.5 5.9 39 95-133 77-116 (207)
174 KOG2931 Differentiation-relate 96.2 0.065 1.4E-06 47.8 10.6 106 26-146 44-155 (326)
175 PLN02310 triacylglycerol lipas 96.1 0.019 4E-07 53.9 7.4 55 97-151 190-251 (405)
176 PF05277 DUF726: Protein of un 96.1 0.017 3.7E-07 53.2 6.8 43 109-151 217-263 (345)
177 PF10340 DUF2424: Protein of u 96.1 0.11 2.4E-06 48.3 12.0 53 94-146 177-233 (374)
178 PLN02802 triacylglycerol lipas 96.0 0.015 3.3E-07 55.7 6.3 56 96-151 312-373 (509)
179 COG4099 Predicted peptidase [G 96.0 0.023 4.9E-07 50.7 6.8 42 104-146 259-302 (387)
180 PLN02753 triacylglycerol lipas 95.9 0.023 5E-07 54.6 6.9 58 95-152 290-362 (531)
181 KOG2112 Lysophospholipase [Lip 95.8 0.052 1.1E-06 46.0 7.8 112 28-144 3-124 (206)
182 PLN03037 lipase class 3 family 95.8 0.041 8.9E-07 52.9 8.1 41 112-152 318-362 (525)
183 cd00312 Esterase_lipase Estera 95.8 0.024 5.2E-07 55.0 6.8 51 96-146 155-211 (493)
184 KOG2984 Predicted hydrolase [G 95.8 0.0068 1.5E-07 51.1 2.5 105 29-148 43-149 (277)
185 COG0627 Predicted esterase [Ge 95.7 0.046 9.9E-07 49.9 7.7 37 113-150 153-189 (316)
186 PLN02847 triacylglycerol lipas 95.6 0.044 9.5E-07 53.5 7.8 39 94-132 233-271 (633)
187 PLN02761 lipase class 3 family 95.6 0.039 8.4E-07 53.1 7.3 56 96-151 272-344 (527)
188 PF03096 Ndr: Ndr family; Int 95.5 0.093 2E-06 46.9 9.0 105 27-146 22-132 (283)
189 PF08840 BAAT_C: BAAT / Acyl-C 95.5 0.032 7E-07 48.0 5.8 53 96-150 4-58 (213)
190 PLN02719 triacylglycerol lipas 95.4 0.043 9.4E-07 52.7 6.8 57 96-152 277-348 (518)
191 PF00135 COesterase: Carboxyle 95.4 0.095 2.1E-06 51.0 9.6 108 27-146 124-243 (535)
192 COG3458 Acetyl esterase (deace 95.3 0.024 5.2E-07 49.9 4.4 122 26-151 81-212 (321)
193 PF04301 DUF452: Protein of un 95.0 0.061 1.3E-06 46.1 5.9 82 27-149 10-92 (213)
194 PRK05371 x-prolyl-dipeptidyl a 94.9 0.19 4.2E-06 51.5 10.3 86 46-146 270-371 (767)
195 KOG4569 Predicted lipase [Lipi 94.7 0.12 2.7E-06 47.6 7.6 56 96-151 155-215 (336)
196 PF03583 LIP: Secretory lipase 94.6 0.31 6.8E-06 44.0 9.8 86 46-149 17-114 (290)
197 PF08237 PE-PPE: PE-PPE domain 94.4 0.39 8.5E-06 41.7 9.7 54 96-151 34-92 (225)
198 COG2272 PnbA Carboxylesterase 94.2 0.33 7.2E-06 46.4 9.3 116 25-148 91-217 (491)
199 PF05577 Peptidase_S28: Serine 94.0 1.4 3.1E-05 42.0 13.6 61 90-151 88-151 (434)
200 PF11144 DUF2920: Protein of u 94.0 0.81 1.7E-05 42.9 11.2 39 25-64 32-72 (403)
201 KOG4540 Putative lipase essent 93.7 0.14 3E-06 45.5 5.4 49 96-148 260-308 (425)
202 COG5153 CVT17 Putative lipase 93.7 0.14 3E-06 45.5 5.4 49 96-148 260-308 (425)
203 PTZ00472 serine carboxypeptida 93.7 0.73 1.6E-05 44.5 10.8 42 91-132 147-191 (462)
204 KOG3043 Predicted hydrolase re 93.3 0.1 2.3E-06 44.7 3.8 109 29-144 40-150 (242)
205 KOG2551 Phospholipase/carboxyh 92.7 1.1 2.3E-05 38.6 9.1 32 27-59 4-39 (230)
206 PF04083 Abhydro_lipase: Parti 92.2 0.12 2.6E-06 35.3 2.3 24 22-45 37-60 (63)
207 KOG2183 Prolylcarboxypeptidase 92.1 1 2.2E-05 42.2 8.8 57 91-148 144-202 (492)
208 KOG2100 Dipeptidyl aminopeptid 91.7 0.86 1.9E-05 46.8 8.8 52 95-146 589-642 (755)
209 KOG2281 Dipeptidyl aminopeptid 91.3 0.4 8.6E-06 47.2 5.5 90 48-148 669-761 (867)
210 KOG1553 Predicted alpha/beta h 91.1 0.76 1.6E-05 42.1 6.8 48 97-146 294-343 (517)
211 KOG2385 Uncharacterized conser 87.7 1.4 3E-05 42.4 6.1 42 109-150 444-489 (633)
212 PF05705 DUF829: Eukaryotic pr 85.8 10 0.00022 32.8 10.3 104 30-152 1-116 (240)
213 KOG1202 Animal-type fatty acid 85.2 3.8 8.2E-05 43.7 8.0 98 24-148 2119-2220(2376)
214 KOG1516 Carboxylesterase and r 83.4 7.5 0.00016 38.2 9.3 20 112-131 195-214 (545)
215 PLN02965 Probable pheophorbida 82.1 0.65 1.4E-05 40.6 1.2 33 255-287 202-239 (255)
216 PF06441 EHN: Epoxide hydrolas 75.1 2.4 5.3E-05 32.5 2.3 24 24-47 88-111 (112)
217 COG2382 Fes Enterochelin ester 72.8 6 0.00013 35.6 4.5 33 113-146 178-210 (299)
218 KOG1551 Uncharacterized conser 72.6 12 0.00025 33.4 6.1 34 110-144 193-226 (371)
219 TIGR01738 bioH putative pimelo 69.4 2 4.3E-05 36.1 0.7 32 255-286 197-233 (245)
220 COG4947 Uncharacterized protei 68.0 32 0.00069 28.7 7.3 34 112-146 101-134 (227)
221 PF06309 Torsin: Torsin; Inte 67.9 57 0.0012 25.6 8.7 67 26-110 50-121 (127)
222 PF06792 UPF0261: Uncharacteri 66.4 82 0.0018 29.8 10.7 110 31-142 3-124 (403)
223 PLN02679 hydrolase, alpha/beta 66.1 3.7 8.1E-05 38.1 1.9 46 255-305 301-356 (360)
224 PRK10349 carboxylesterase BioH 65.4 7.5 0.00016 33.6 3.6 31 255-285 205-240 (256)
225 COG2936 Predicted acyl esteras 64.3 16 0.00034 36.1 5.8 86 50-150 75-161 (563)
226 PLN02824 hydrolase, alpha/beta 63.5 3.6 7.7E-05 36.6 1.2 33 255-287 243-280 (294)
227 KOG2237 Predicted serine prote 63.3 6.4 0.00014 39.1 2.9 53 95-149 530-584 (712)
228 PF08386 Abhydrolase_4: TAP-li 61.6 11 0.00023 28.2 3.4 30 255-284 43-77 (103)
229 COG2830 Uncharacterized protei 60.7 14 0.00031 30.3 4.0 77 29-146 12-88 (214)
230 COG4822 CbiK Cobalamin biosynt 59.6 63 0.0014 27.9 7.8 38 26-63 136-175 (265)
231 KOG2182 Hydrolytic enzymes of 59.3 1.1E+02 0.0024 29.8 10.2 118 26-150 83-209 (514)
232 PLN02511 hydrolase 58.9 12 0.00027 35.1 4.0 51 255-307 307-366 (388)
233 PF14606 Lipase_GDSL_3: GDSL-l 58.6 33 0.00071 28.6 6.0 26 94-119 76-101 (178)
234 PF00326 Peptidase_S9: Prolyl 58.0 47 0.001 27.8 7.2 42 27-68 143-187 (213)
235 PRK07581 hypothetical protein; 57.9 7.8 0.00017 35.4 2.4 47 255-306 284-336 (339)
236 PF10081 Abhydrolase_9: Alpha/ 57.9 1.1E+02 0.0025 27.5 9.5 39 112-150 109-149 (289)
237 COG3673 Uncharacterized conser 57.2 1.5E+02 0.0032 27.4 10.1 37 96-132 105-142 (423)
238 TIGR03056 bchO_mg_che_rel puta 55.0 5 0.00011 34.8 0.6 32 255-286 229-265 (278)
239 KOG4388 Hormone-sensitive lipa 55.0 83 0.0018 31.4 8.7 42 110-151 467-511 (880)
240 TIGR01249 pro_imino_pep_1 prol 53.7 13 0.00029 33.3 3.2 29 255-283 257-290 (306)
241 COG1506 DAP2 Dipeptidyl aminop 50.8 61 0.0013 32.6 7.6 43 26-68 549-594 (620)
242 TIGR03131 malonate_mdcH malona 48.2 29 0.00063 31.0 4.5 31 101-131 65-95 (295)
243 COG1505 Serine proteases of th 47.8 6.1 0.00013 38.9 -0.0 54 93-148 479-534 (648)
244 COG1770 PtrB Protease II [Amin 46.9 44 0.00095 33.6 5.6 54 95-150 508-563 (682)
245 PRK03592 haloalkane dehalogena 46.2 9.4 0.0002 33.9 1.0 32 255-286 237-274 (295)
246 PF00698 Acyl_transf_1: Acyl t 45.2 19 0.00042 32.7 2.9 30 102-131 74-103 (318)
247 smart00827 PKS_AT Acyl transfe 45.0 34 0.00074 30.5 4.5 28 104-131 74-101 (298)
248 PRK03204 haloalkane dehalogena 44.1 11 0.00024 33.6 1.0 32 255-286 236-273 (286)
249 PRK06489 hypothetical protein; 44.0 13 0.00029 34.3 1.6 45 255-305 301-356 (360)
250 PRK02399 hypothetical protein; 42.6 3.1E+02 0.0066 26.1 11.7 110 31-142 5-126 (406)
251 PRK05579 bifunctional phosphop 42.4 2.4E+02 0.0051 26.8 9.8 33 28-60 116-151 (399)
252 PRK10673 acyl-CoA esterase; Pr 41.9 13 0.00028 31.9 1.1 31 256-286 205-240 (255)
253 PRK08775 homoserine O-acetyltr 41.4 9.7 0.00021 34.9 0.3 46 255-305 286-338 (343)
254 TIGR00128 fabD malonyl CoA-acy 41.3 39 0.00085 29.9 4.2 26 106-131 76-102 (290)
255 PRK00870 haloalkane dehalogena 41.0 19 0.0004 32.2 2.1 32 255-286 248-286 (302)
256 PLN02578 hydrolase 40.5 18 0.00039 33.3 1.9 32 255-287 305-341 (354)
257 cd01714 ETF_beta The electron 40.4 2.3E+02 0.0049 23.9 8.6 46 98-144 96-145 (202)
258 PLN02211 methyl indole-3-aceta 40.3 30 0.00065 30.6 3.3 30 255-285 220-254 (273)
259 TIGR01250 pro_imino_pep_2 prol 39.5 12 0.00027 32.1 0.6 21 266-286 255-275 (288)
260 PRK11126 2-succinyl-6-hydroxy- 39.4 12 0.00027 31.7 0.6 42 256-303 198-239 (242)
261 TIGR02764 spore_ybaN_pdaB poly 38.4 27 0.00059 29.0 2.6 33 28-60 151-186 (191)
262 PF12697 Abhydrolase_6: Alpha/ 37.2 9.8 0.00021 31.1 -0.3 39 255-302 185-228 (228)
263 PF09419 PGP_phosphatase: Mito 36.7 60 0.0013 26.8 4.2 54 50-122 35-88 (168)
264 PF00450 Peptidase_S10: Serine 36.3 3.5E+02 0.0075 25.1 10.0 60 90-150 111-182 (415)
265 TIGR02873 spore_ylxY probable 35.6 45 0.00097 29.7 3.6 33 28-60 230-262 (268)
266 KOG2170 ATPase of the AAA+ sup 35.3 1.2E+02 0.0026 27.8 6.1 31 27-57 108-140 (344)
267 KOG2521 Uncharacterized conser 34.1 2.5E+02 0.0054 26.1 8.2 108 27-152 37-156 (350)
268 TIGR03712 acc_sec_asp2 accesso 33.6 62 0.0013 31.4 4.3 48 97-148 340-389 (511)
269 PF05576 Peptidase_S37: PS-10 33.6 65 0.0014 30.6 4.3 58 91-150 114-171 (448)
270 PF00091 Tubulin: Tubulin/FtsZ 33.0 96 0.0021 26.4 5.2 31 95-125 107-137 (216)
271 cd01841 NnaC_like NnaC (CMP-Ne 32.7 2.5E+02 0.0055 22.3 10.2 73 28-117 22-96 (174)
272 PRK03482 phosphoglycerate muta 32.2 1.4E+02 0.0031 25.2 6.1 31 90-120 121-151 (215)
273 TIGR02240 PHA_depoly_arom poly 32.2 26 0.00056 30.7 1.5 31 255-286 216-251 (276)
274 COG0400 Predicted esterase [Ge 31.7 1.7E+02 0.0037 24.9 6.4 38 25-62 143-183 (207)
275 TIGR02884 spore_pdaA delta-lac 31.5 52 0.0011 28.3 3.2 33 28-60 186-219 (224)
276 PLN02733 phosphatidylcholine-s 31.3 32 0.00069 33.1 2.0 42 255-306 375-419 (440)
277 cd01844 SGNH_hydrolase_like_6 31.2 2.8E+02 0.006 22.3 8.3 24 94-117 76-99 (177)
278 PF06180 CbiK: Cobalt chelatas 30.8 1.4E+02 0.003 26.5 5.9 36 27-62 140-178 (262)
279 TIGR00521 coaBC_dfp phosphopan 29.3 4.9E+02 0.011 24.6 9.7 32 29-60 113-147 (390)
280 KOG1202 Animal-type fatty acid 29.3 53 0.0012 35.7 3.3 29 96-124 566-594 (2376)
281 PF02230 Abhydrolase_2: Phosph 29.1 1.9E+02 0.0041 24.3 6.3 37 27-63 154-193 (216)
282 cd01836 FeeA_FeeB_like SGNH_hy 28.9 3.1E+02 0.0068 22.1 7.6 12 95-106 90-101 (191)
283 PRK10985 putative hydrolase; P 28.7 69 0.0015 29.0 3.7 50 255-306 264-320 (324)
284 COG1448 TyrB Aspartate/tyrosin 28.4 5.1E+02 0.011 24.5 9.3 34 26-59 169-209 (396)
285 cd04502 SGNH_hydrolase_like_7 27.6 3.1E+02 0.0068 21.7 8.8 71 31-118 24-96 (171)
286 PRK12467 peptide synthase; Pro 27.6 2.1E+02 0.0046 35.7 8.3 97 29-144 3693-3791(3956)
287 PRK10749 lysophospholipase L2; 27.0 31 0.00067 31.4 1.1 33 255-287 268-312 (330)
288 PF09994 DUF2235: Uncharacteri 26.9 1.1E+02 0.0023 27.4 4.5 37 96-132 75-112 (277)
289 TIGR02816 pfaB_fam PfaB family 26.4 90 0.002 30.9 4.2 26 107-132 260-285 (538)
290 PF03283 PAE: Pectinacetyleste 26.3 99 0.0022 28.9 4.3 35 97-131 139-175 (361)
291 cd03818 GT1_ExpC_like This fam 26.0 93 0.002 28.9 4.2 32 31-64 2-33 (396)
292 PRK11460 putative hydrolase; P 25.9 3.3E+02 0.0071 23.3 7.3 35 27-61 147-184 (232)
293 COG3675 Predicted lipase [Lipi 25.3 35 0.00075 30.8 1.0 47 101-147 163-213 (332)
294 PRK10279 hypothetical protein; 25.0 1E+02 0.0022 28.0 4.0 30 102-132 24-53 (300)
295 PF13200 DUF4015: Putative gly 24.8 1.5E+02 0.0033 27.1 5.1 33 32-64 2-35 (316)
296 PF13378 MR_MLE_C: Enolase C-t 24.4 2.9E+02 0.0063 20.3 6.3 63 40-132 3-65 (111)
297 TIGR03695 menH_SHCHC 2-succiny 24.4 50 0.0011 27.2 1.9 21 266-286 218-238 (251)
298 TIGR01392 homoserO_Ac_trn homo 24.4 17 0.00037 33.4 -1.1 31 255-285 297-337 (351)
299 cd00286 Tubulin_FtsZ Tubulin/F 23.9 2.5E+02 0.0054 25.5 6.5 30 94-123 71-100 (328)
300 PF14253 AbiH: Bacteriophage a 23.8 39 0.00084 29.7 1.1 19 110-128 233-251 (270)
301 PRK11789 N-acetyl-anhydromuran 23.4 84 0.0018 26.4 2.9 31 90-120 127-157 (185)
302 cd07212 Pat_PNPLA9 Patatin-lik 23.3 1.2E+02 0.0027 27.5 4.3 19 115-133 35-53 (312)
303 PHA02114 hypothetical protein 23.2 1.1E+02 0.0024 22.8 3.1 32 29-60 83-114 (127)
304 cd07225 Pat_PNPLA6_PNPLA7 Pata 23.0 1.1E+02 0.0025 27.7 4.0 24 109-132 40-63 (306)
305 PRK14457 ribosomal RNA large s 23.0 3.6E+02 0.0077 25.0 7.3 36 30-65 259-294 (345)
306 PRK00175 metX homoserine O-ace 22.2 26 0.00057 32.7 -0.3 45 255-304 318-372 (379)
307 TIGR03162 ribazole_cobC alpha- 22.0 3E+02 0.0064 22.1 6.1 32 90-121 116-147 (177)
308 PLN03084 alpha/beta hydrolase 21.3 95 0.0021 29.2 3.2 31 256-286 335-369 (383)
309 PF08433 KTI12: Chromatin asso 21.3 3.7E+02 0.008 23.9 6.8 33 30-62 2-36 (270)
310 PRK14338 (dimethylallyl)adenos 21.3 6.6E+02 0.014 24.2 9.1 29 31-59 22-52 (459)
311 PF00300 His_Phos_1: Histidine 21.3 1.4E+02 0.0031 23.1 3.9 32 90-121 121-153 (158)
No 1
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.86 E-value=1.3e-20 Score=165.49 Aligned_cols=168 Identities=15% Similarity=0.226 Sum_probs=107.7
Q ss_pred CCCCCcEEEeCCCCCCchhHHHHHHHHH-hCCCc--EEEEeeccccccccc---CCCCCcccccccCCCC--CcHHHHHH
Q 021730 25 HFQCRPAVILPGLGNNSGDYQRLQLTLK-DYGVP--TVVAEVSRFDWLRNA---AGLVDPNYWRATLRPR--PVLDWYFS 96 (308)
Q Consensus 25 ~~~~~pvvlvHG~~~~~~~~~~l~~~L~-~~G~~--v~~~~~~~~d~~~~~---~g~~~~~~~~~~~~~~--~~~~~~~~ 96 (308)
.....|+|||||++++..++..|++++. +.|.. ++.+.|...|..... ......+...-.+... ..+..+.+
T Consensus 8 ~~~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 8 NQSTTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp --S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred ccCCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 4567899999999999999999999998 77663 777888777766421 1111122222222222 35667789
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCC----CCccEEEEecCCCCCCCCCcch--h--------hhhh
Q 021730 97 RMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGS----SDISLLLTLGTPHLPPPKGLPW--V--------IDQT 162 (308)
Q Consensus 97 ~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~----~~v~~lv~lgtP~~~~~~g~~~--~--------~~~~ 162 (308)
+|..++.+|.+++..+++++|||||||+.+..|+.++.. ++|+++|+||+||++....... . ....
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~~gp~~~~ 167 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLNKNGPKSMT 167 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CSTT-BSS--
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhcccCCcccC
Confidence 999999999999999999999999999999999998643 3689999999999997532110 0 0011
Q ss_pred hhHHHHHHHhccCCCCCCCcEEEEEeeccccc
Q 021730 163 RGLLNYVEKQCSKAIYTPELKYVCIAGRYIQG 194 (308)
Q Consensus 163 ~~~~~~~~~~~p~~~~~~~~~~~~iag~~~~g 194 (308)
..+..++.. . ...++.++.+++|+|+...|
T Consensus 168 ~~y~~l~~~-~-~~~~p~~i~VLnI~G~~~~g 197 (255)
T PF06028_consen 168 PMYQDLLKN-R-RKNFPKNIQVLNIYGDLEDG 197 (255)
T ss_dssp HHHHHHHHT-H-GGGSTTT-EEEEEEEESBTT
T ss_pred HHHHHHHHH-H-HhhCCCCeEEEEEecccCCC
Confidence 122222222 1 12356789999999986544
No 2
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.67 E-value=1.4e-15 Score=137.62 Aligned_cols=110 Identities=25% Similarity=0.378 Sum_probs=89.3
Q ss_pred CcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHh
Q 021730 29 RPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEF 108 (308)
Q Consensus 29 ~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~ 108 (308)
..||++||++.+...|..++..|..+||.|+. +||+|++.+. . +..+....++.+.++++..++.+...
T Consensus 35 g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~-----~D~RGhG~S~--r----~~rg~~~~f~~~~~dl~~~~~~~~~~ 103 (298)
T COG2267 35 GVVVLVHGLGEHSGRYEELADDLAARGFDVYA-----LDLRGHGRSP--R----GQRGHVDSFADYVDDLDAFVETIAEP 103 (298)
T ss_pred cEEEEecCchHHHHHHHHHHHHHHhCCCEEEE-----ecCCCCCCCC--C----CCcCCchhHHHHHHHHHHHHHHHhcc
Confidence 78999999999999999999999999999998 5676654221 0 11223345888899999999988876
Q ss_pred CCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCCCC
Q 021730 109 TPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHLPP 151 (308)
Q Consensus 109 ~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~~~ 151 (308)
.+..+++++||||||+|++.|+.+++ .+|+++|+. +|..+.
T Consensus 104 ~~~~p~~l~gHSmGg~Ia~~~~~~~~-~~i~~~vLs-sP~~~l 144 (298)
T COG2267 104 DPGLPVFLLGHSMGGLIALLYLARYP-PRIDGLVLS-SPALGL 144 (298)
T ss_pred CCCCCeEEEEeCcHHHHHHHHHHhCC-ccccEEEEE-CccccC
Confidence 78899999999999999999999977 479999866 566444
No 3
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=99.67 E-value=9.3e-15 Score=124.64 Aligned_cols=167 Identities=18% Similarity=0.188 Sum_probs=108.7
Q ss_pred CCCCcEEEeCCCCCCchhHHHHHHHHHhCCC---cEEEEeecccccccccCCCC----Cccccc-ccCCCCCcHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQLTLKDYGV---PTVVAEVSRFDWLRNAAGLV----DPNYWR-ATLRPRPVLDWYFSR 97 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~---~v~~~~~~~~d~~~~~~g~~----~~~~~~-~~~~~~~~~~~~~~~ 97 (308)
....|++||||++++..++..|+++|...+- ..+.+.+...+-.. ..|.. .++..+ +....+.....+..+
T Consensus 43 ~~~iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk-~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~w 121 (288)
T COG4814 43 KVAIPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLK-VTGKISKDAKNPIIEFGFEDNTASGLDQSKW 121 (288)
T ss_pred ccccceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEE-EeeeecccCCCCeEEEEEecCcCchhhHHHH
Confidence 4568999999999999999999999988741 22222222222111 01111 111110 000011233344789
Q ss_pred HHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCC----CccEEEEecCCCC-CCCCCcchhhh--------hhhh
Q 021730 98 MNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSS----DISLLLTLGTPHL-PPPKGLPWVID--------QTRG 164 (308)
Q Consensus 98 l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~----~v~~lv~lgtP~~-~~~~g~~~~~~--------~~~~ 164 (308)
++.++.+|++++...++++|||||||+-...|+.+++.+ .++++|.|+.||+ +...+.....+ .-..
T Consensus 122 lk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~~~~~~~~~t~ 201 (288)
T COG4814 122 LKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVLKDGPGLIKTP 201 (288)
T ss_pred HHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheeeccCccccCcH
Confidence 999999999999999999999999999999999998653 4999999999999 33222111111 0012
Q ss_pred HHHHHHHhccCCCCCCCcEEEEEeecccccc
Q 021730 165 LLNYVEKQCSKAIYTPELKYVCIAGRYIQGA 195 (308)
Q Consensus 165 ~~~~~~~~~p~~~~~~~~~~~~iag~~~~g~ 195 (308)
..+++..++.. .+++++++.|+|+...|.
T Consensus 202 y~~y~~~n~k~--v~~~~evl~IaGDl~dg~ 230 (288)
T COG4814 202 YYDYIAKNYKK--VSPNTEVLLIAGDLDDGK 230 (288)
T ss_pred HHHHHHhccee--CCCCcEEEEEecccccCC
Confidence 34555555432 457899999999976553
No 4
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.65 E-value=5.2e-15 Score=128.49 Aligned_cols=146 Identities=21% Similarity=0.291 Sum_probs=94.1
Q ss_pred CCCcEEEeCCCCCCchhHHHHHHHHHhC--------CCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNSGDYQRLQLTLKDY--------GVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRM 98 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~~~~l~~~L~~~--------G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l 98 (308)
.+.|||||||++++...++.++..+.+. .++++.+|+. .. ...+.+ ..+....+.+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~-----~~------~s~~~g-----~~l~~q~~~~ 66 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFN-----EE------LSAFHG-----RTLQRQAEFL 66 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccC-----cc------cccccc-----ccHHHHHHHH
Confidence 6789999999999999999888877332 2334443322 11 111111 2233445677
Q ss_pred HHHHHHHHHhC-----CCCeEEEEEEChHHHHHHHHHHHhC--CCCccEEEEecCCCCCCCCCcchhhhhhhhHHHHHHH
Q 021730 99 NDAIQKAKEFT-----PGGKLSLIGHSAGGWLARVYMEEFG--SSDISLLLTLGTPHLPPPKGLPWVIDQTRGLLNYVEK 171 (308)
Q Consensus 99 ~~~i~~l~~~~-----~~~~v~lvGHSmGG~va~~~~~~~~--~~~v~~lv~lgtP~~~~~~g~~~~~~~~~~~~~~~~~ 171 (308)
.++++.+.+.+ +.++|+||||||||++++.++.... ...|+.+|+++|||.+++........ .+...++.
T Consensus 67 ~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~~~~d~~~~---~~y~~~~~ 143 (225)
T PF07819_consen 67 AEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSPLAFDRSLD---RFYKRLNN 143 (225)
T ss_pred HHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCccccchHHHH---HHHHHHHH
Confidence 77777777665 6789999999999999999887543 24699999999999988743222222 22233333
Q ss_pred hccCC----CCCCCcEEEEEeecc
Q 021730 172 QCSKA----IYTPELKYVCIAGRY 191 (308)
Q Consensus 172 ~~p~~----~~~~~~~~~~iag~~ 191 (308)
.+... .....+.+++|+|..
T Consensus 144 ~~~~~~~~~~~~~~v~~vSi~gG~ 167 (225)
T PF07819_consen 144 FWRKNYSPADSLRDVTVVSIAGGI 167 (225)
T ss_pred HHHHhcccccccCCceEEEecCCc
Confidence 22221 113567788888763
No 5
>PHA02857 monoglyceride lipase; Provisional
Probab=99.63 E-value=9.1e-15 Score=130.59 Aligned_cols=111 Identities=15% Similarity=0.207 Sum_probs=82.0
Q ss_pred CCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKA 105 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 105 (308)
..++.|+|+||++++...|..+++.|.+.||.|+..|++.+|. . +.. .. ....+..+++++.+.+..+
T Consensus 23 ~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~-----S--~~~--~~---~~~~~~~~~~d~~~~l~~~ 90 (276)
T PHA02857 23 YPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGR-----S--NGE--KM---MIDDFGVYVRDVVQHVVTI 90 (276)
T ss_pred CCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCC-----C--CCc--cC---CcCCHHHHHHHHHHHHHHH
Confidence 3445566669999999999999999999999999865544431 1 110 00 1134555567777777777
Q ss_pred HHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCC
Q 021730 106 KEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHL 149 (308)
Q Consensus 106 ~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~ 149 (308)
....+..+++++||||||++++.++.+++. +|+++|+++++..
T Consensus 91 ~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~-~i~~lil~~p~~~ 133 (276)
T PHA02857 91 KSTYPGVPVFLLGHSMGATISILAAYKNPN-LFTAMILMSPLVN 133 (276)
T ss_pred HhhCCCCCEEEEEcCchHHHHHHHHHhCcc-ccceEEEeccccc
Confidence 665666789999999999999999988665 7999999987543
No 6
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.61 E-value=2.3e-14 Score=132.72 Aligned_cols=110 Identities=15% Similarity=0.085 Sum_probs=80.8
Q ss_pred CCCCcEEEeCCCCCCchh-HHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGD-YQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQK 104 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~-~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 104 (308)
..+++|||+||++++... |..+++.|.++||.|+.+|++.++.. .+ .. .....++.+++++.+.++.
T Consensus 85 ~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S---~~--~~-------~~~~~~~~~~~dv~~~l~~ 152 (349)
T PLN02385 85 RPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLS---EG--LH-------GYIPSFDDLVDDVIEHYSK 152 (349)
T ss_pred CCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCC---CC--CC-------CCcCCHHHHHHHHHHHHHH
Confidence 456789999999988765 57899999999999999665544311 01 00 0113466677888877777
Q ss_pred HHHh--CCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 105 AKEF--TPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 105 l~~~--~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
+... .+..+++|+||||||+++..++.+++. +|+++|++++..
T Consensus 153 l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~-~v~glVLi~p~~ 197 (349)
T PLN02385 153 IKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPN-AWDGAILVAPMC 197 (349)
T ss_pred HHhccccCCCCEEEEEeccchHHHHHHHHhCcc-hhhheeEecccc
Confidence 6542 234589999999999999999988765 799999998643
No 7
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.60 E-value=2.5e-14 Score=131.32 Aligned_cols=109 Identities=14% Similarity=0.101 Sum_probs=80.7
Q ss_pred CCCcEEEeCCCCCCc-hhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNS-GDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKA 105 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~-~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 105 (308)
.++.|||+||++++. ..|..++..|.++||.|+.+|++.+|. + +.. ......++.+.+|+...++.+
T Consensus 58 ~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~-----S--~~~-----~~~~~~~~~~~~D~~~~i~~l 125 (330)
T PLN02298 58 PRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGR-----S--EGL-----RAYVPNVDLVVEDCLSFFNSV 125 (330)
T ss_pred CceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCC-----C--CCc-----cccCCCHHHHHHHHHHHHHHH
Confidence 456799999998664 356788899999999999966554431 1 100 011235677788999999988
Q ss_pred HHh--CCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 106 KEF--TPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 106 ~~~--~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
... ....+++|+||||||++++.++.+++. +|+++|+++++.
T Consensus 126 ~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~-~v~~lvl~~~~~ 169 (330)
T PLN02298 126 KQREEFQGLPRFLYGESMGGAICLLIHLANPE-GFDGAVLVAPMC 169 (330)
T ss_pred HhcccCCCCCEEEEEecchhHHHHHHHhcCcc-cceeEEEecccc
Confidence 653 234579999999999999999888665 799999998754
No 8
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.57 E-value=9.1e-14 Score=132.76 Aligned_cols=110 Identities=15% Similarity=0.126 Sum_probs=76.8
Q ss_pred CCCcEEEeCCCCCCchhHHH-HHHHHH---hCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNSGDYQR-LQLTLK---DYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAI 102 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~~~~-l~~~L~---~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i 102 (308)
.++||||+||++++...|.. +...|. +.+|+|+.+|++.++.. +.+. . ....++.+.+++.
T Consensus 200 ~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S-------~~p~--~---~~ytl~~~a~~l~--- 264 (481)
T PLN03087 200 AKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRS-------PKPA--D---SLYTLREHLEMIE--- 264 (481)
T ss_pred CCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCC-------cCCC--C---CcCCHHHHHHHHH---
Confidence 35799999999999999985 556665 36899999766554321 1100 0 0122444444442
Q ss_pred HHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCCCCC
Q 021730 103 QKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHLPPP 152 (308)
Q Consensus 103 ~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~~~~ 152 (308)
..+.+..+.+++++|||||||++++.++.+++. +|+++|++++|....+
T Consensus 265 ~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe-~V~~LVLi~~~~~~~~ 313 (481)
T PLN03087 265 RSVLERYKVKSFHIVAHSLGCILALALAVKHPG-AVKSLTLLAPPYYPVP 313 (481)
T ss_pred HHHHHHcCCCCEEEEEECHHHHHHHHHHHhChH-hccEEEEECCCccccc
Confidence 234445667899999999999999999999876 8999999998875443
No 9
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.56 E-value=8e-14 Score=127.51 Aligned_cols=112 Identities=21% Similarity=0.367 Sum_probs=83.0
Q ss_pred CCCCcEEEeCCCCCCchhHHHHHHHHHhC-CCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQLTLKDY-GVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQK 104 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~~~L~~~-G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 104 (308)
.+++|||++|||+++...|+.++..|.+. |+.|+.+|+..+++... .+.+ +. .++.+....++.
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~----~~~~---------~~--y~~~~~v~~i~~ 120 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSP----LPRG---------PL--YTLRELVELIRR 120 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCC----CCCC---------Cc--eehhHHHHHHHH
Confidence 57899999999999999999999999876 57788887665443210 0110 11 123444455555
Q ss_pred HHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEE---EecCCCCCCCC
Q 021730 105 AKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLL---TLGTPHLPPPK 153 (308)
Q Consensus 105 l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv---~lgtP~~~~~~ 153 (308)
+..+...+++++|||||||+++..++..+|. .|+++| ++++|....+.
T Consensus 121 ~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~-~V~~lv~~~~~~~~~~~~~~ 171 (326)
T KOG1454|consen 121 FVKEVFVEPVSLVGHSLGGIVALKAAAYYPE-TVDSLVLLDLLGPPVYSTPK 171 (326)
T ss_pred HHHhhcCcceEEEEeCcHHHHHHHHHHhCcc-cccceeeecccccccccCCc
Confidence 5555667889999999999999999999876 799999 77888876553
No 10
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.55 E-value=9.6e-14 Score=124.00 Aligned_cols=106 Identities=18% Similarity=0.189 Sum_probs=72.1
Q ss_pred CCCCcEEEeCCCCCCchhHHH---HHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQR---LQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAI 102 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~---l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i 102 (308)
+.+++|||+||++++...|.. .+..|.+.||.|+.+|++.++... .... . ..... .+.+++.
T Consensus 28 g~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~-------~~~~-~---~~~~~-~~~~~l~--- 92 (282)
T TIGR03343 28 GNGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSD-------AVVM-D---EQRGL-VNARAVK--- 92 (282)
T ss_pred CCCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCC-------CCcC-c---ccccc-hhHHHHH---
Confidence 355789999999988877753 455677788999997765554211 1000 0 00111 1234444
Q ss_pred HHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 103 QKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 103 ~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
++.+..+.++++++||||||.++..++.+++. +|+++|+++++.
T Consensus 93 -~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~-~v~~lvl~~~~~ 136 (282)
T TIGR03343 93 -GLMDALDIEKAHLVGNSMGGATALNFALEYPD-RIGKLILMGPGG 136 (282)
T ss_pred -HHHHHcCCCCeeEEEECchHHHHHHHHHhChH-hhceEEEECCCC
Confidence 44444566899999999999999999998765 799999998764
No 11
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.52 E-value=9.2e-14 Score=125.96 Aligned_cols=105 Identities=15% Similarity=0.127 Sum_probs=77.4
Q ss_pred CCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAK 106 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~ 106 (308)
.+++|||+||++++...|..+++.|.+.||.|+.+|++.++.. +.+. . . ....++.+.+++.+.++
T Consensus 45 ~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S-------~~~~--~-~-~~~~~~~~a~~l~~~l~--- 110 (302)
T PRK00870 45 DGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRS-------DKPT--R-R-EDYTYARHVEWMRSWFE--- 110 (302)
T ss_pred CCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCC-------CCCC--C-c-ccCCHHHHHHHHHHHHH---
Confidence 3679999999999999999999999988999999776655421 1100 0 0 01234444555555444
Q ss_pred HhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCC
Q 021730 107 EFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTP 147 (308)
Q Consensus 107 ~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP 147 (308)
+.+.++++||||||||+++..++.+++. +|+++|++++.
T Consensus 111 -~l~~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~ 149 (302)
T PRK00870 111 -QLDLTDVTLVCQDWGGLIGLRLAAEHPD-RFARLVVANTG 149 (302)
T ss_pred -HcCCCCEEEEEEChHHHHHHHHHHhChh-heeEEEEeCCC
Confidence 3456799999999999999999998765 79999999863
No 12
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.52 E-value=1.3e-13 Score=123.46 Aligned_cols=105 Identities=18% Similarity=0.259 Sum_probs=76.6
Q ss_pred CCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKA 105 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 105 (308)
+.+++|||+||++.+...|..++..|.+.||.|+.+|++.++... .. ......++.+.+++.+.++.+
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~-------~~-----~~~~~~~~~~~~~l~~~i~~l 83 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQ-------SD-----ADSVTTFDEYNKPLIDFLSSL 83 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCC-------CC-----cccCCCHHHHHHHHHHHHHhc
Confidence 456789999999999999999999999999999997766543110 00 000123444445555554443
Q ss_pred HHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 106 KEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 106 ~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
...++++||||||||+++..++.+++. +|+++|++++
T Consensus 84 ---~~~~~v~lvGhS~GG~v~~~~a~~~p~-~v~~lv~~~~ 120 (273)
T PLN02211 84 ---PENEKVILVGHSAGGLSVTQAIHRFPK-KICLAVYVAA 120 (273)
T ss_pred ---CCCCCEEEEEECchHHHHHHHHHhChh-heeEEEEecc
Confidence 124799999999999999999987654 7999999965
No 13
>PLN02965 Probable pheophorbidase
Probab=99.52 E-value=1.1e-13 Score=122.42 Aligned_cols=102 Identities=20% Similarity=0.249 Sum_probs=77.0
Q ss_pred CcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHh
Q 021730 29 RPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEF 108 (308)
Q Consensus 29 ~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~ 108 (308)
..|||+||++.+...|..++..|.+.||+|+.+|++.+|.... ... .....+.+.+++.+.++++
T Consensus 4 ~~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~-----~~~-------~~~~~~~~a~dl~~~l~~l--- 68 (255)
T PLN02965 4 IHFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLT-----DSN-------TVSSSDQYNRPLFALLSDL--- 68 (255)
T ss_pred eEEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCC-----Ccc-------ccCCHHHHHHHHHHHHHhc---
Confidence 3599999999999999999999988899999977665542210 000 0123555556666666553
Q ss_pred CCC-CeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCC
Q 021730 109 TPG-GKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTP 147 (308)
Q Consensus 109 ~~~-~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP 147 (308)
+. ++++||||||||.++..++.+++. +|+++|++++.
T Consensus 69 -~~~~~~~lvGhSmGG~ia~~~a~~~p~-~v~~lvl~~~~ 106 (255)
T PLN02965 69 -PPDHKVILVGHSIGGGSVTEALCKFTD-KISMAIYVAAA 106 (255)
T ss_pred -CCCCCEEEEecCcchHHHHHHHHhCch-heeEEEEEccc
Confidence 33 599999999999999999998765 89999999874
No 14
>PRK10749 lysophospholipase L2; Provisional
Probab=99.52 E-value=2.2e-13 Score=125.23 Aligned_cols=115 Identities=15% Similarity=0.114 Sum_probs=85.4
Q ss_pred CCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKA 105 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 105 (308)
.++++|||+||++++...|..++..|.+.||.|+.+|++.+|... .............++.+++++...++.+
T Consensus 52 ~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~-------~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 124 (330)
T PRK10749 52 HHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSG-------RLLDDPHRGHVERFNDYVDDLAAFWQQE 124 (330)
T ss_pred CCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCC-------CCCCCCCcCccccHHHHHHHHHHHHHHH
Confidence 345689999999999999999999999999999986655443211 1000000011134677788888888877
Q ss_pred HHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 106 KEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 106 ~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
....+..+++++||||||.+++.++.+++. +|+++|+++++.
T Consensus 125 ~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~-~v~~lvl~~p~~ 166 (330)
T PRK10749 125 IQPGPYRKRYALAHSMGGAILTLFLQRHPG-VFDAIALCAPMF 166 (330)
T ss_pred HhcCCCCCeEEEEEcHHHHHHHHHHHhCCC-CcceEEEECchh
Confidence 655567899999999999999999998765 799999887654
No 15
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.50 E-value=3.5e-13 Score=117.58 Aligned_cols=102 Identities=13% Similarity=0.174 Sum_probs=75.7
Q ss_pred CCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAK 106 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~ 106 (308)
.+++|||+||++++...|..+++.|.+ +|.|+.+|++.++... .. ......++.+.+++.+.++.+
T Consensus 12 ~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~-------~~-----~~~~~~~~~~~~~~~~~i~~~- 77 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSP-------GE-----LPPGYSIAHMADDVLQLLDAL- 77 (257)
T ss_pred CCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCC-------CC-----CcccCCHHHHHHHHHHHHHHh-
Confidence 467899999999999999999988876 5999997766554211 00 011134555566666666544
Q ss_pred HhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 107 EFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 107 ~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
..++++++||||||.++..++.+++. +|+++|++++
T Consensus 78 ---~~~~~~l~G~S~Gg~~a~~~a~~~~~-~v~~~i~~~~ 113 (257)
T TIGR03611 78 ---NIERFHFVGHALGGLIGLQLALRYPE-RLLSLVLINA 113 (257)
T ss_pred ---CCCcEEEEEechhHHHHHHHHHHChH-HhHHheeecC
Confidence 45789999999999999999988664 7999999875
No 16
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.50 E-value=9e-14 Score=124.35 Aligned_cols=104 Identities=16% Similarity=0.127 Sum_probs=76.4
Q ss_pred CCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAK 106 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~ 106 (308)
.++||||+||++++...|..+++.|.+. |+|+.+|++.+|... .+. ....++.+.+++.+.+++
T Consensus 24 ~~~plvllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~-------~~~------~~~~~~~~~~~~~~~i~~-- 87 (276)
T TIGR02240 24 GLTPLLIFNGIGANLELVFPFIEALDPD-LEVIAFDVPGVGGSS-------TPR------HPYRFPGLAKLAARMLDY-- 87 (276)
T ss_pred CCCcEEEEeCCCcchHHHHHHHHHhccC-ceEEEECCCCCCCCC-------CCC------CcCcHHHHHHHHHHHHHH--
Confidence 3469999999999999999999999774 899997766554211 000 001234444455444444
Q ss_pred HhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCC
Q 021730 107 EFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHL 149 (308)
Q Consensus 107 ~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~ 149 (308)
...++++||||||||+++..++.+++. +|+++|+++++..
T Consensus 88 --l~~~~~~LvG~S~GG~va~~~a~~~p~-~v~~lvl~~~~~~ 127 (276)
T TIGR02240 88 --LDYGQVNAIGVSWGGALAQQFAHDYPE-RCKKLILAATAAG 127 (276)
T ss_pred --hCcCceEEEEECHHHHHHHHHHHHCHH-HhhheEEeccCCc
Confidence 456799999999999999999998765 7999999988653
No 17
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.49 E-value=1.7e-13 Score=118.46 Aligned_cols=103 Identities=12% Similarity=0.070 Sum_probs=73.6
Q ss_pred CCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAK 106 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~ 106 (308)
.+++|||+||++.+...|..+++.|. .||.|+.+|++.++.. ... ......+.+.+++.+.++.
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s-------~~~------~~~~~~~~~~~~~~~~i~~-- 75 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALT-PDFRVLRYDKRGHGLS-------DAP------EGPYSIEDLADDVLALLDH-- 75 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhh-cccEEEEecCCCCCCC-------CCC------CCCCCHHHHHHHHHHHHHH--
Confidence 45689999999999999999999986 4799998665544311 110 0012344444555554444
Q ss_pred HhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 107 EFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 107 ~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
.+.++++++||||||+++..++.+++. +|+++|+++++.
T Consensus 76 --~~~~~v~liG~S~Gg~~a~~~a~~~p~-~v~~li~~~~~~ 114 (251)
T TIGR02427 76 --LGIERAVFCGLSLGGLIAQGLAARRPD-RVRALVLSNTAA 114 (251)
T ss_pred --hCCCceEEEEeCchHHHHHHHHHHCHH-HhHHHhhccCcc
Confidence 445789999999999999999988654 799999988754
No 18
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.49 E-value=3e-13 Score=118.09 Aligned_cols=101 Identities=18% Similarity=0.090 Sum_probs=74.4
Q ss_pred CCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHH
Q 021730 28 CRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKE 107 (308)
Q Consensus 28 ~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~ 107 (308)
+++|||+||++++...|..+++.| + +|+|+.+|++.++.. +.+ ....++.+.+++.+.++
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S-------~~~-------~~~~~~~~~~~l~~~l~---- 61 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGS-------AAI-------SVDGFADVSRLLSQTLQ---- 61 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCC-------CCc-------cccCHHHHHHHHHHHHH----
Confidence 568999999999999999999998 3 699999665544321 110 01234444455544444
Q ss_pred hCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 108 FTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 108 ~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
+.+.+++++|||||||.++..++.++++.+|+++|+++++.
T Consensus 62 ~~~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 62 SYNILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred HcCCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCC
Confidence 44668999999999999999999998665699999887653
No 19
>PRK11071 esterase YqiA; Provisional
Probab=99.48 E-value=1.6e-12 Score=110.19 Aligned_cols=88 Identities=16% Similarity=0.231 Sum_probs=63.5
Q ss_pred CcEEEeCCCCCCchhHH--HHHHHHHhC--CCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHH
Q 021730 29 RPAVILPGLGNNSGDYQ--RLQLTLKDY--GVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQK 104 (308)
Q Consensus 29 ~pvvlvHG~~~~~~~~~--~l~~~L~~~--G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 104 (308)
++|||+||++++...|. .+...|.+. +|.|+..|++.+ . ++..+.+++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~------------------------~----~~~~~~l~~ 53 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPY------------------------P----ADAAELLES 53 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCC------------------------H----HHHHHHHHH
Confidence 47999999999999998 356777663 677776443311 0 223444555
Q ss_pred HHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 105 AKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 105 l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
+.++.+.+++++|||||||.++..++.+++. ++|+++++.
T Consensus 54 l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~----~~vl~~~~~ 93 (190)
T PRK11071 54 LVLEHGGDPLGLVGSSLGGYYATWLSQCFML----PAVVVNPAV 93 (190)
T ss_pred HHHHcCCCCeEEEEECHHHHHHHHHHHHcCC----CEEEECCCC
Confidence 5555666899999999999999999998762 367787765
No 20
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.48 E-value=2.6e-12 Score=118.28 Aligned_cols=114 Identities=16% Similarity=0.122 Sum_probs=80.3
Q ss_pred CCCCcEEEeCCCCCCch-h---------------------H----HHHHHHHHhCCCcEEEEeecccccccccCCCCCcc
Q 021730 26 FQCRPAVILPGLGNNSG-D---------------------Y----QRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPN 79 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~-~---------------------~----~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~ 79 (308)
.++..||++||++++.. . | ..+++.|.++||.|+.. |++|++.+... .
T Consensus 19 ~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~-----D~rGHG~S~~~-~ 92 (332)
T TIGR01607 19 NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGL-----DLQGHGESDGL-Q 92 (332)
T ss_pred CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEe-----cccccCCCccc-c
Confidence 45678999999999886 2 2 57899999999999985 45543211100 0
Q ss_pred cccccCCCCCcHHHHHHHHHHHHHHHHH-------------------hCC-CCeEEEEEEChHHHHHHHHHHHhCC----
Q 021730 80 YWRATLRPRPVLDWYFSRMNDAIQKAKE-------------------FTP-GGKLSLIGHSAGGWLARVYMEEFGS---- 135 (308)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~l~~~i~~l~~-------------------~~~-~~~v~lvGHSmGG~va~~~~~~~~~---- 135 (308)
...+ ....++.+++|+.+.++.+.+ .++ ..+++|+||||||++++.++..++.
T Consensus 93 ~~~g---~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~ 169 (332)
T TIGR01607 93 NLRG---HINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNEN 169 (332)
T ss_pred cccc---chhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhcccccc
Confidence 0000 113567778888888887765 244 5789999999999999999876532
Q ss_pred ---CCccEEEEecCCC
Q 021730 136 ---SDISLLLTLGTPH 148 (308)
Q Consensus 136 ---~~v~~lv~lgtP~ 148 (308)
..++++|+++++.
T Consensus 170 ~~~~~i~g~i~~s~~~ 185 (332)
T TIGR01607 170 NDKLNIKGCISLSGMI 185 (332)
T ss_pred ccccccceEEEeccce
Confidence 1588998888765
No 21
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.47 E-value=3.3e-13 Score=121.81 Aligned_cols=103 Identities=13% Similarity=0.073 Sum_probs=77.2
Q ss_pred CCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAK 106 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~ 106 (308)
.++||||+||++++...|..+++.|.+.+ +|+.+|.+.++.. +.+. .....+.+.+++.+.+++
T Consensus 26 ~g~~vvllHG~~~~~~~w~~~~~~L~~~~-~via~D~~G~G~S-------~~~~------~~~~~~~~a~dl~~ll~~-- 89 (295)
T PRK03592 26 EGDPIVFLHGNPTSSYLWRNIIPHLAGLG-RCLAPDLIGMGAS-------DKPD------IDYTFADHARYLDAWFDA-- 89 (295)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHhhCC-EEEEEcCCCCCCC-------CCCC------CCCCHHHHHHHHHHHHHH--
Confidence 56799999999999999999999999985 9998665544311 1110 012344455555555554
Q ss_pred HhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 107 EFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 107 ~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
.+.+++++|||||||.++..++.+++. +|+++|+++++.
T Consensus 90 --l~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lil~~~~~ 128 (295)
T PRK03592 90 --LGLDDVVLVGHDWGSALGFDWAARHPD-RVRGIAFMEAIV 128 (295)
T ss_pred --hCCCCeEEEEECHHHHHHHHHHHhChh-heeEEEEECCCC
Confidence 456899999999999999999999875 799999999743
No 22
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.47 E-value=3.7e-13 Score=121.40 Aligned_cols=109 Identities=14% Similarity=0.170 Sum_probs=77.1
Q ss_pred CCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHH
Q 021730 28 CRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKE 107 (308)
Q Consensus 28 ~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~ 107 (308)
++||||+||++++...|..++..|.++ |+|+.+|.+.++... ..............++.+.+++.+.++++
T Consensus 29 ~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~------~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-- 99 (294)
T PLN02824 29 GPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSD------KPNPRSAPPNSFYTFETWGEQLNDFCSDV-- 99 (294)
T ss_pred CCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCC------CCccccccccccCCHHHHHHHHHHHHHHh--
Confidence 579999999999999999999999987 689886655443211 00000000001123444555555555544
Q ss_pred hCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 108 FTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 108 ~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
..++++||||||||.++..++.+++. +|+++|+++++.
T Consensus 100 --~~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lili~~~~ 137 (294)
T PLN02824 100 --VGDPAFVICNSVGGVVGLQAAVDAPE-LVRGVMLINISL 137 (294)
T ss_pred --cCCCeEEEEeCHHHHHHHHHHHhChh-heeEEEEECCCc
Confidence 56899999999999999999998775 899999998754
No 23
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.43 E-value=1e-12 Score=111.58 Aligned_cols=102 Identities=21% Similarity=0.306 Sum_probs=74.4
Q ss_pred EEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHhCC
Q 021730 31 AVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEFTP 110 (308)
Q Consensus 31 vvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~~~ 110 (308)
|||+||++++...|..+++.| ++||.|+.+|.+.++... ... . ......+.+++++.+.+++ ..
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l-~~~~~v~~~d~~G~G~s~-------~~~--~--~~~~~~~~~~~~l~~~l~~----~~ 64 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEAL-ARGYRVIAFDLPGHGRSD-------PPP--D--YSPYSIEDYAEDLAELLDA----LG 64 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHH-HTTSEEEEEECTTSTTSS-------SHS--S--GSGGSHHHHHHHHHHHHHH----TT
T ss_pred eEEECCCCCCHHHHHHHHHHH-hCCCEEEEEecCCccccc-------ccc--c--cCCcchhhhhhhhhhcccc----cc
Confidence 799999999999999999999 479999997765543211 110 0 0012344445555555544 44
Q ss_pred CCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCC
Q 021730 111 GGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHL 149 (308)
Q Consensus 111 ~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~ 149 (308)
.+++++|||||||.++..++.+++. +|+++|+++++..
T Consensus 65 ~~~~~lvG~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 65 IKKVILVGHSMGGMIALRLAARYPD-RVKGLVLLSPPPP 102 (228)
T ss_dssp TSSEEEEEETHHHHHHHHHHHHSGG-GEEEEEEESESSS
T ss_pred ccccccccccccccccccccccccc-ccccceeeccccc
Confidence 5899999999999999999998765 8999999998763
No 24
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.42 E-value=1.5e-12 Score=114.44 Aligned_cols=102 Identities=17% Similarity=0.163 Sum_probs=75.3
Q ss_pred CCCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHH
Q 021730 25 HFQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQK 104 (308)
Q Consensus 25 ~~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 104 (308)
...++||||+||++++...|..++..|.+. |.|+.+|.+.+|.. ... ..-.++.+.+++.+.+++
T Consensus 13 ~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~s-------~~~-------~~~~~~~~~~d~~~~l~~ 77 (255)
T PRK10673 13 PHNNSPIVLVHGLFGSLDNLGVLARDLVND-HDIIQVDMRNHGLS-------PRD-------PVMNYPAMAQDLLDTLDA 77 (255)
T ss_pred CCCCCCEEEECCCCCchhHHHHHHHHHhhC-CeEEEECCCCCCCC-------CCC-------CCCCHHHHHHHHHHHHHH
Confidence 346789999999999999999999999764 99998665544311 110 011244445555555554
Q ss_pred HHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 105 AKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 105 l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
.+.+++++|||||||.++..++.+++. +|+++|++++
T Consensus 78 ----l~~~~~~lvGhS~Gg~va~~~a~~~~~-~v~~lvli~~ 114 (255)
T PRK10673 78 ----LQIEKATFIGHSMGGKAVMALTALAPD-RIDKLVAIDI 114 (255)
T ss_pred ----cCCCceEEEEECHHHHHHHHHHHhCHh-hcceEEEEec
Confidence 455789999999999999999988665 7999999865
No 25
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.41 E-value=1.5e-12 Score=121.15 Aligned_cols=105 Identities=14% Similarity=0.136 Sum_probs=75.3
Q ss_pred CCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAK 106 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~ 106 (308)
.++||||+||++++...|..++..|.+ +|.|+.+|++.++... .+. .....++.+.+++.+.+++
T Consensus 87 ~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~-------~~~-----~~~~~~~~~a~~l~~~l~~-- 151 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASD-------KPP-----GFSYTMETWAELILDFLEE-- 151 (360)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCC-------CCC-----CccccHHHHHHHHHHHHHH--
Confidence 347999999999999999999999977 6999997766554211 100 0011234444555555544
Q ss_pred HhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 107 EFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 107 ~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
...++++||||||||+++..++..+.+.+|+++|+++++.
T Consensus 152 --l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~ 191 (360)
T PLN02679 152 --VVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAG 191 (360)
T ss_pred --hcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCcc
Confidence 4457999999999999999888754445899999998753
No 26
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.40 E-value=1.6e-12 Score=116.26 Aligned_cols=106 Identities=20% Similarity=0.280 Sum_probs=81.3
Q ss_pred CCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKA 105 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 105 (308)
..+.|+|||||+|++...|..-.+.|.+ ...|+.+|+..+|.. .++.+... ..... +.+.+.|++-
T Consensus 88 ~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~S-------SRP~F~~d--~~~~e----~~fvesiE~W 153 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRS-------SRPKFSID--PTTAE----KEFVESIEQW 153 (365)
T ss_pred cCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCC-------CCCCCCCC--cccch----HHHHHHHHHH
Confidence 6789999999999999999999999988 588999877655421 22222111 11112 2455666777
Q ss_pred HHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 106 KEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 106 ~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
+...+.++++||||||||.++..|+.+||. +|++||++++
T Consensus 154 R~~~~L~KmilvGHSfGGYLaa~YAlKyPe-rV~kLiLvsP 193 (365)
T KOG4409|consen 154 RKKMGLEKMILVGHSFGGYLAAKYALKYPE-RVEKLILVSP 193 (365)
T ss_pred HHHcCCcceeEeeccchHHHHHHHHHhChH-hhceEEEecc
Confidence 777788999999999999999999999987 7999998865
No 27
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.40 E-value=9.9e-12 Score=109.31 Aligned_cols=109 Identities=17% Similarity=0.077 Sum_probs=84.0
Q ss_pred CCCCCcEEEeCCCCCCc-hhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHH
Q 021730 25 HFQCRPAVILPGLGNNS-GDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQ 103 (308)
Q Consensus 25 ~~~~~pvvlvHG~~~~~-~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 103 (308)
+.++..|+++||+++.. ..|..++..|.+.||.|+.+| |.|.+.+.... .-.++++..++|+...++
T Consensus 51 ~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D-----~~GhG~SdGl~-------~yi~~~d~~v~D~~~~~~ 118 (313)
T KOG1455|consen 51 TEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAID-----YEGHGRSDGLH-------AYVPSFDLVVDDVISFFD 118 (313)
T ss_pred CCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEee-----ccCCCcCCCCc-------ccCCcHHHHHHHHHHHHH
Confidence 36788899999999876 889999999999999999854 55432111011 123678888888888888
Q ss_pred HHH--HhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 104 KAK--EFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 104 ~l~--~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
.++ .+++..+..|.||||||.|++.+..+.+. ...++|++++
T Consensus 119 ~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~-~w~G~ilvaP 162 (313)
T KOG1455|consen 119 SIKEREENKGLPRFLFGESMGGAVALLIALKDPN-FWDGAILVAP 162 (313)
T ss_pred HHhhccccCCCCeeeeecCcchHHHHHHHhhCCc-ccccceeeec
Confidence 644 44667899999999999999999988554 6888888865
No 28
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.39 E-value=4.3e-12 Score=119.19 Aligned_cols=110 Identities=20% Similarity=0.290 Sum_probs=83.1
Q ss_pred CCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKA 105 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 105 (308)
..+++|||+||++++...|..+++.|.++||.|+.+| |+|.+...... ......+++.+++.+.++.+
T Consensus 134 ~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D-----~rGhG~S~~~~-------~~~~~~~~~~~Dl~~~l~~l 201 (395)
T PLN02652 134 EMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMD-----WIGHGGSDGLH-------GYVPSLDYVVEDTEAFLEKI 201 (395)
T ss_pred CCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeC-----CCCCCCCCCCC-------CCCcCHHHHHHHHHHHHHHH
Confidence 3466899999999999999999999999999999855 44432111000 01235677789999999998
Q ss_pred HHhCCCCeEEEEEEChHHHHHHHHHHHhCC--CCccEEEEecCCC
Q 021730 106 KEFTPGGKLSLIGHSAGGWLARVYMEEFGS--SDISLLLTLGTPH 148 (308)
Q Consensus 106 ~~~~~~~~v~lvGHSmGG~va~~~~~~~~~--~~v~~lv~lgtP~ 148 (308)
..+.+..+++++||||||+++..++. ++. .+|+++|+.++..
T Consensus 202 ~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l 245 (395)
T PLN02652 202 RSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPAL 245 (395)
T ss_pred HHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECccc
Confidence 87776678999999999999998765 343 3699999876543
No 29
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.39 E-value=1.6e-11 Score=114.09 Aligned_cols=105 Identities=17% Similarity=0.200 Sum_probs=76.0
Q ss_pred CCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKA 105 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 105 (308)
+.+++|||+||++++...|..+...|.+. |.|+.+|++.++.. ... .....++ ++.+.+..+
T Consensus 129 ~~~~~vl~~HG~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s-------~~~------~~~~~~~----~~~~~~~~~ 190 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNWLFNHAALAAG-RPVIALDLPGHGAS-------SKA------VGAGSLD----ELAAAVLAF 190 (371)
T ss_pred CCCCeEEEECCCCCccchHHHHHHHHhcC-CEEEEEcCCCCCCC-------CCC------CCCCCHH----HHHHHHHHH
Confidence 34679999999999999999999999776 99998765544311 000 0112333 344444444
Q ss_pred HHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCC
Q 021730 106 KEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHL 149 (308)
Q Consensus 106 ~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~ 149 (308)
.++.+.++++++||||||.++..++..++. +++++|+++++..
T Consensus 191 ~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~-~v~~lv~~~~~~~ 233 (371)
T PRK14875 191 LDALGIERAHLVGHSMGGAVALRLAARAPQ-RVASLTLIAPAGL 233 (371)
T ss_pred HHhcCCccEEEEeechHHHHHHHHHHhCch-heeEEEEECcCCc
Confidence 455566789999999999999999988654 7999999987643
No 30
>PRK10985 putative hydrolase; Provisional
Probab=99.39 E-value=4.4e-12 Score=116.34 Aligned_cols=113 Identities=12% Similarity=0.032 Sum_probs=80.8
Q ss_pred CCCCcEEEeCCCCCCchh--HHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGD--YQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQ 103 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~--~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 103 (308)
..+++||++||++++... +..+++.|.++||.|++.++ +|.+....... ........+|+..+++
T Consensus 56 ~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~-----rG~g~~~~~~~--------~~~~~~~~~D~~~~i~ 122 (324)
T PRK10985 56 RHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHF-----RGCSGEPNRLH--------RIYHSGETEDARFFLR 122 (324)
T ss_pred CCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeC-----CCCCCCccCCc--------ceECCCchHHHHHHHH
Confidence 356789999999877443 45799999999999998654 43211000000 0000112478888888
Q ss_pred HHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCC-CccEEEEecCCCCCC
Q 021730 104 KAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSS-DISLLLTLGTPHLPP 151 (308)
Q Consensus 104 ~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~-~v~~lv~lgtP~~~~ 151 (308)
.+.++.+..++++|||||||.++..|+.+++.. .+.++|++++|+...
T Consensus 123 ~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~ 171 (324)
T PRK10985 123 WLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLE 171 (324)
T ss_pred HHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHH
Confidence 888777778999999999999999888876553 489999999998643
No 31
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.39 E-value=7.1e-12 Score=111.33 Aligned_cols=107 Identities=13% Similarity=0.063 Sum_probs=78.6
Q ss_pred CCCcEEEeCCCCCCc----hhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNS----GDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAI 102 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~----~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i 102 (308)
.+++|||+||++++. ..|..+++.|.++||.|+.+|++.++- +.+ . . .....+.+.+|+..++
T Consensus 24 ~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~---S~g----~-----~-~~~~~~~~~~Dv~~ai 90 (266)
T TIGR03101 24 PRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGD---SAG----D-----F-AAARWDVWKEDVAAAY 90 (266)
T ss_pred CceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCC---CCC----c-----c-ccCCHHHHHHHHHHHH
Confidence 467899999998753 456678999999999999966554431 111 0 0 0123555678888888
Q ss_pred HHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 103 QKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 103 ~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
+.+.+. +.++++++||||||.++..++.+++. +++++|++++..
T Consensus 91 ~~L~~~-~~~~v~LvG~SmGG~vAl~~A~~~p~-~v~~lVL~~P~~ 134 (266)
T TIGR03101 91 RWLIEQ-GHPPVTLWGLRLGALLALDAANPLAA-KCNRLVLWQPVV 134 (266)
T ss_pred HHHHhc-CCCCEEEEEECHHHHHHHHHHHhCcc-ccceEEEecccc
Confidence 877653 56899999999999999999988764 799999997654
No 32
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.39 E-value=1.4e-12 Score=112.05 Aligned_cols=111 Identities=21% Similarity=0.257 Sum_probs=69.3
Q ss_pred CCcEEEeCCCCC-CchhHHHHHHHHHhCCCc---EEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHH
Q 021730 28 CRPAVILPGLGN-NSGDYQRLQLTLKDYGVP---TVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQ 103 (308)
Q Consensus 28 ~~pvvlvHG~~~-~~~~~~~l~~~L~~~G~~---v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 103 (308)
+.|||||||.++ ....|..+++.|.++||. ++..++....-. +.. ... .... +..+.|++.|+
T Consensus 1 ~~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~---------~~~-~~~--~~~~-~~~~~l~~fI~ 67 (219)
T PF01674_consen 1 NRPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGS---------PSV-QNA--HMSC-ESAKQLRAFID 67 (219)
T ss_dssp S--EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHH---------THH-HHH--HB-H-HHHHHHHHHHH
T ss_pred CCCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCC---------Ccc-ccc--ccch-hhHHHHHHHHH
Confidence 469999999998 778999999999999998 676543222110 000 000 0122 23578999999
Q ss_pred HHHHhCCCCeEEEEEEChHHHHHHHHHHHhC------------CCCccEEEEecCCCCCCC
Q 021730 104 KAKEFTPGGKLSLIGHSAGGWLARVYMEEFG------------SSDISLLLTLGTPHLPPP 152 (308)
Q Consensus 104 ~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~------------~~~v~~lv~lgtP~~~~~ 152 (308)
.+++..+. +|.||||||||.++|.|+.... ..+|..+|.++.+++|..
T Consensus 68 ~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~~~~~d~~~~lg~~~~~~v~t~v~lag~n~G~~ 127 (219)
T PF01674_consen 68 AVLAYTGA-KVDIVGHSMGGTIARYYIKGGGGADKVVNLGPPLTSKVGTFVGLAGANHGLT 127 (219)
T ss_dssp HHHHHHT---EEEEEETCHHHHHHHHHHHCTGGGTEEE----GGG-EEEEEEES--TT--C
T ss_pred HHHHhhCC-EEEEEEcCCcCHHHHHHHHHcCCCCcccCccccccccccccccccccccccc
Confidence 99988888 9999999999999999998532 124777888888886654
No 33
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.38 E-value=4.4e-12 Score=109.31 Aligned_cols=103 Identities=16% Similarity=0.149 Sum_probs=73.2
Q ss_pred CCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHH-HHHHH
Q 021730 28 CRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDA-IQKAK 106 (308)
Q Consensus 28 ~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~-i~~l~ 106 (308)
+++|||+||++++...|..+++.|. .||.|+.+|++.++- . +.+ ... ....+ +++.+. +..+.
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~-----s--~~~---~~~-~~~~~----~~~~~~~~~~~~ 64 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGS-----S--QSP---DEI-ERYDF----EEAAQDILATLL 64 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCC-----C--CCC---Ccc-ChhhH----HHHHHHHHHHHH
Confidence 4689999999999999999999998 789999866543321 1 000 000 01122 333333 45555
Q ss_pred HhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCC
Q 021730 107 EFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTP 147 (308)
Q Consensus 107 ~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP 147 (308)
+..+.++++++||||||.++..++.+++. +|++++++++.
T Consensus 65 ~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~-~v~~lil~~~~ 104 (251)
T TIGR03695 65 DQLGIEPFFLVGYSMGGRIALYYALQYPE-RVQGLILESGS 104 (251)
T ss_pred HHcCCCeEEEEEeccHHHHHHHHHHhCch-heeeeEEecCC
Confidence 55567899999999999999999998765 79999988764
No 34
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.38 E-value=2.5e-12 Score=115.87 Aligned_cols=105 Identities=13% Similarity=0.084 Sum_probs=76.6
Q ss_pred CCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKA 105 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 105 (308)
+.+++|||+||++.+...|..++..|.+. |.|+.+|++.++.. +.+ .......+++.+.+..+
T Consensus 32 G~~~~iv~lHG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S-------~~~---------~~~~~~~~~~~~~~~~~ 94 (286)
T PRK03204 32 GTGPPILLCHGNPTWSFLYRDIIVALRDR-FRCVAPDYLGFGLS-------ERP---------SGFGYQIDEHARVIGEF 94 (286)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHHhCC-cEEEEECCCCCCCC-------CCC---------CccccCHHHHHHHHHHH
Confidence 34689999999999999999999999765 99998665544311 110 00011134555555555
Q ss_pred HHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 106 KEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 106 ~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
.++.+.++++++||||||.++..++..++. +|+++|+++++.
T Consensus 95 ~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~-~v~~lvl~~~~~ 136 (286)
T PRK03204 95 VDHLGLDRYLSMGQDWGGPISMAVAVERAD-RVRGVVLGNTWF 136 (286)
T ss_pred HHHhCCCCEEEEEECccHHHHHHHHHhChh-heeEEEEECccc
Confidence 555667899999999999999999988765 899999887654
No 35
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.37 E-value=4.8e-12 Score=111.74 Aligned_cols=95 Identities=20% Similarity=0.246 Sum_probs=69.0
Q ss_pred CcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHh
Q 021730 29 RPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEF 108 (308)
Q Consensus 29 ~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~ 108 (308)
+||||+||++++...|..++..|.+. |+|+.+|++.++... .. .....+ ++.+.+.+
T Consensus 14 ~~ivllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~-------~~-------~~~~~~----~~~~~l~~---- 70 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWRCIDEELSSH-FTLHLVDLPGFGRSR-------GF-------GALSLA----DMAEAVLQ---- 70 (256)
T ss_pred CeEEEECCCCCChhHHHHHHHHHhcC-CEEEEecCCCCCCCC-------CC-------CCCCHH----HHHHHHHh----
Confidence 36999999999999999999999876 999997655443210 00 001222 23333332
Q ss_pred CCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCC
Q 021730 109 TPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTP 147 (308)
Q Consensus 109 ~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP 147 (308)
...+++++|||||||.++..++.+++. +|+++|+++++
T Consensus 71 ~~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lili~~~ 108 (256)
T PRK10349 71 QAPDKAIWLGWSLGGLVASQIALTHPE-RVQALVTVASS 108 (256)
T ss_pred cCCCCeEEEEECHHHHHHHHHHHhChH-hhheEEEecCc
Confidence 235799999999999999999988665 89999999763
No 36
>PLN02578 hydrolase
Probab=99.35 E-value=5.5e-12 Score=117.08 Aligned_cols=102 Identities=16% Similarity=0.195 Sum_probs=75.9
Q ss_pred CCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKA 105 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 105 (308)
+.++||||+||++++...|..++..|.+. |.|+.+|++.++.. +.+. .....+.+.+++.+.++++
T Consensus 84 g~g~~vvliHG~~~~~~~w~~~~~~l~~~-~~v~~~D~~G~G~S-------~~~~------~~~~~~~~a~~l~~~i~~~ 149 (354)
T PLN02578 84 GEGLPIVLIHGFGASAFHWRYNIPELAKK-YKVYALDLLGFGWS-------DKAL------IEYDAMVWRDQVADFVKEV 149 (354)
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHhcC-CEEEEECCCCCCCC-------CCcc------cccCHHHHHHHHHHHHHHh
Confidence 35679999999999999999999999764 99999776554421 1110 0122344455666666654
Q ss_pred HHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 106 KEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 106 ~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
..+++++|||||||.++..++.+++. +|+++|++++
T Consensus 150 ----~~~~~~lvG~S~Gg~ia~~~A~~~p~-~v~~lvLv~~ 185 (354)
T PLN02578 150 ----VKEPAVLVGNSLGGFTALSTAVGYPE-LVAGVALLNS 185 (354)
T ss_pred ----ccCCeEEEEECHHHHHHHHHHHhChH-hcceEEEECC
Confidence 34789999999999999999999765 7999999875
No 37
>PRK13604 luxD acyl transferase; Provisional
Probab=99.34 E-value=9.7e-11 Score=105.20 Aligned_cols=104 Identities=19% Similarity=0.228 Sum_probs=73.5
Q ss_pred CCCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccc---cCCCCCcccccccCCCCCcHHHHHHHHHHH
Q 021730 25 HFQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRN---AAGLVDPNYWRATLRPRPVLDWYFSRMNDA 101 (308)
Q Consensus 25 ~~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~ 101 (308)
..+.+.||++||++++...|..++++|.++||.|+. +|+++. +.|.+. ..+. ....+|+..+
T Consensus 34 ~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLr-----fD~rg~~GeS~G~~~----~~t~------s~g~~Dl~aa 98 (307)
T PRK13604 34 PKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIR-----YDSLHHVGLSSGTID----EFTM------SIGKNSLLTV 98 (307)
T ss_pred CCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEE-----ecCCCCCCCCCCccc----cCcc------cccHHHHHHH
Confidence 345578999999999887899999999999999998 554432 222111 0111 1124788889
Q ss_pred HHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 102 IQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 102 i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
++.++++ ..+++.|+||||||.++...+.+ .+++.+|+. +|+
T Consensus 99 id~lk~~-~~~~I~LiG~SmGgava~~~A~~---~~v~~lI~~-sp~ 140 (307)
T PRK13604 99 VDWLNTR-GINNLGLIAASLSARIAYEVINE---IDLSFLITA-VGV 140 (307)
T ss_pred HHHHHhc-CCCceEEEEECHHHHHHHHHhcC---CCCCEEEEc-CCc
Confidence 9998774 45789999999999998665542 247776654 555
No 38
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.34 E-value=1.4e-11 Score=103.56 Aligned_cols=110 Identities=15% Similarity=0.221 Sum_probs=85.5
Q ss_pred CCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKA 105 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 105 (308)
+.++.|+|+|||.+++.+.+.|.++|+++||+|.+..++.+|..+ -.+.. ...+.++++..+..+.+
T Consensus 13 ~G~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~-------e~fl~------t~~~DW~~~v~d~Y~~L 79 (243)
T COG1647 13 GGNRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLP-------EDFLK------TTPRDWWEDVEDGYRDL 79 (243)
T ss_pred cCCEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCH-------HHHhc------CCHHHHHHHHHHHHHHH
Confidence 455899999999999999999999999999999987666555322 01111 22344457777777777
Q ss_pred HHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCCCCC
Q 021730 106 KEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHLPPP 152 (308)
Q Consensus 106 ~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~~~~ 152 (308)
.+ .+.+.|.++|-||||++++.++..++ ++++|.+++|.+...
T Consensus 80 ~~-~gy~eI~v~GlSmGGv~alkla~~~p---~K~iv~m~a~~~~k~ 122 (243)
T COG1647 80 KE-AGYDEIAVVGLSMGGVFALKLAYHYP---PKKIVPMCAPVNVKS 122 (243)
T ss_pred HH-cCCCeEEEEeecchhHHHHHHHhhCC---ccceeeecCCccccc
Confidence 64 35689999999999999999988764 789999999997653
No 39
>PLN02511 hydrolase
Probab=99.33 E-value=1.2e-11 Score=116.17 Aligned_cols=111 Identities=22% Similarity=0.295 Sum_probs=81.1
Q ss_pred CCCCcEEEeCCCCCCchh-H-HHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGD-Y-QRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQ 103 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~-~-~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 103 (308)
..+++|||+||+.++... | ..++..+.++||.|+++|.+.++ ...... +......+.+|+.++++
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G-----~s~~~~--------~~~~~~~~~~Dl~~~i~ 164 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCA-----DSPVTT--------PQFYSASFTGDLRQVVD 164 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCC-----CCCCCC--------cCEEcCCchHHHHHHHH
Confidence 356789999999876543 4 56888888999999986544332 110000 00111224678999999
Q ss_pred HHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCC-CccEEEEecCCCC
Q 021730 104 KAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSS-DISLLLTLGTPHL 149 (308)
Q Consensus 104 ~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~-~v~~lv~lgtP~~ 149 (308)
.+..+++..++++|||||||.++..|+.+++.. .|.+++++++|+.
T Consensus 165 ~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~ 211 (388)
T PLN02511 165 HVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFD 211 (388)
T ss_pred HHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcC
Confidence 998888878999999999999999999987752 3899999988874
No 40
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.32 E-value=1.3e-11 Score=114.40 Aligned_cols=109 Identities=21% Similarity=0.239 Sum_probs=83.4
Q ss_pred CCCCcEEEeCCCCCCchhH-----HHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHH-HHHH
Q 021730 26 FQCRPAVILPGLGNNSGDY-----QRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYF-SRMN 99 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~-----~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~l~ 99 (308)
..+.|||++||+..+...+ ..+++.|.++||+|+.+| |++.... + ....++.+. +++.
T Consensus 60 ~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D-----~~g~g~s--~---------~~~~~~d~~~~~~~ 123 (350)
T TIGR01836 60 THKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLID-----WGYPDRA--D---------RYLTLDDYINGYID 123 (350)
T ss_pred CCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEe-----CCCCCHH--H---------hcCCHHHHHHHHHH
Confidence 4567999999987666554 589999999999999854 5432100 0 012244444 4588
Q ss_pred HHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCCCC
Q 021730 100 DAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHLPP 151 (308)
Q Consensus 100 ~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~~~ 151 (308)
++++.+.++.+.++++++||||||+++..|+..++. +|+++|++++|....
T Consensus 124 ~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~-~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 124 KCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPD-KIKNLVTMVTPVDFE 174 (350)
T ss_pred HHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCch-heeeEEEeccccccC
Confidence 889999888888999999999999999999988665 799999999998643
No 41
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.31 E-value=1.3e-11 Score=109.42 Aligned_cols=105 Identities=15% Similarity=0.158 Sum_probs=75.4
Q ss_pred CCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAK 106 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~ 106 (308)
.+++|||+||++++...|..+++.|.+. |.|+.+|++.++.. +.+. .....++.+.+++.+.++
T Consensus 27 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S-------~~~~-----~~~~~~~~~~~~l~~~i~--- 90 (278)
T TIGR03056 27 AGPLLLLLHGTGASTHSWRDLMPPLARS-FRVVAPDLPGHGFT-------RAPF-----RFRFTLPSMAEDLSALCA--- 90 (278)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHhhC-cEEEeecCCCCCCC-------CCcc-----ccCCCHHHHHHHHHHHHH---
Confidence 3579999999999999999999999774 99998665544311 1110 001234444455555444
Q ss_pred HhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCC
Q 021730 107 EFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHL 149 (308)
Q Consensus 107 ~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~ 149 (308)
+...++++|+||||||+++..++.+++. +++++|++++++.
T Consensus 91 -~~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~v~~~v~~~~~~~ 131 (278)
T TIGR03056 91 -AEGLSPDGVIGHSAGAAIALRLALDGPV-TPRMVVGINAALM 131 (278)
T ss_pred -HcCCCCceEEEECccHHHHHHHHHhCCc-ccceEEEEcCccc
Confidence 3455789999999999999999988764 7999999987654
No 42
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.31 E-value=3.3e-11 Score=113.78 Aligned_cols=109 Identities=17% Similarity=0.210 Sum_probs=74.0
Q ss_pred CCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKA 105 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 105 (308)
+.+++|||+||++++...|...+..|.+. |.|+.+|+..++. + +.+.. .. ...+...+.+.+.+.+.
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~~~L~~~-~~vi~~D~rG~G~-----S--~~~~~--~~---~~~~~~~~~~~~~i~~~ 169 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNFDALASR-FRVIAIDQLGWGG-----S--SRPDF--TC---KSTEETEAWFIDSFEEW 169 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHHHHHHhC-CEEEEECCCCCCC-----C--CCCCc--cc---ccHHHHHHHHHHHHHHH
Confidence 35689999999999999999889999875 9999865443331 1 11100 00 11111122233344444
Q ss_pred HHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 106 KEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 106 ~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
.+..+.++++|+||||||.+++.++.+++. +|+++|+++++.
T Consensus 170 ~~~l~~~~~~lvGhS~GG~la~~~a~~~p~-~v~~lvl~~p~~ 211 (402)
T PLN02894 170 RKAKNLSNFILLGHSFGGYVAAKYALKHPE-HVQHLILVGPAG 211 (402)
T ss_pred HHHcCCCCeEEEEECHHHHHHHHHHHhCch-hhcEEEEECCcc
Confidence 444456799999999999999999998765 799999997643
No 43
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.30 E-value=1.8e-11 Score=114.50 Aligned_cols=108 Identities=17% Similarity=0.205 Sum_probs=79.1
Q ss_pred CCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAK 106 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~ 106 (308)
.+++|||+||++++...|..++..|.+ +|.|+.+|++.++.-. .+. ........++.+.+++.+.++++
T Consensus 126 ~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~-------~p~--~~~~~~ys~~~~a~~l~~~i~~l- 194 (383)
T PLN03084 126 NNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSD-------KPQ--PGYGFNYTLDEYVSSLESLIDEL- 194 (383)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCC-------CCc--ccccccCCHHHHHHHHHHHHHHh-
Confidence 467999999999999999999999976 6999997766554211 100 00000123455556666555554
Q ss_pred HhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCC
Q 021730 107 EFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHL 149 (308)
Q Consensus 107 ~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~ 149 (308)
..++++||||||||+++..++.+++. +|+++|++++|..
T Consensus 195 ---~~~~~~LvG~s~GG~ia~~~a~~~P~-~v~~lILi~~~~~ 233 (383)
T PLN03084 195 ---KSDKVSLVVQGYFSPPVVKYASAHPD-KIKKLILLNPPLT 233 (383)
T ss_pred ---CCCCceEEEECHHHHHHHHHHHhChH-hhcEEEEECCCCc
Confidence 45789999999999999999998765 7999999998763
No 44
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=99.29 E-value=3.3e-11 Score=104.29 Aligned_cols=115 Identities=25% Similarity=0.314 Sum_probs=71.5
Q ss_pred CCCCcEEEeCCCCCCchhHHHHHHHHHhC--CCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQLTLKDY--GVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQ 103 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~~~L~~~--G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 103 (308)
++...||||||+.++..+|..+.+.+... .+.-..+.+ +... .+. ......++...+.+.+.|.
T Consensus 2 ~~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~--~~~~--------~n~----~~T~~gI~~~g~rL~~eI~ 67 (217)
T PF05057_consen 2 KPVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVV--LGYS--------NNE----FKTFDGIDVCGERLAEEIL 67 (217)
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhh--hccc--------ccc----cccchhhHHHHHHHHHHHH
Confidence 35668999999999999999999988772 121101000 0000 000 0011234445555655555
Q ss_pred HHHHhCCC--CeEEEEEEChHHHHHHHHHHHhCC-----C------CccEEEEecCCCCCCCCC
Q 021730 104 KAKEFTPG--GKLSLIGHSAGGWLARVYMEEFGS-----S------DISLLLTLGTPHLPPPKG 154 (308)
Q Consensus 104 ~l~~~~~~--~~v~lvGHSmGG~va~~~~~~~~~-----~------~v~~lv~lgtP~~~~~~g 154 (308)
+..+.... .++++|||||||++++.++..... . ++..+++++|||.|....
T Consensus 68 ~~~~~~~~~~~~IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G~~~~ 131 (217)
T PF05057_consen 68 EHIKDYESKIRKISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLGSRYA 131 (217)
T ss_pred HhccccccccccceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCCCccc
Confidence 54443433 489999999999999988874221 1 345678899999988643
No 45
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.28 E-value=2.1e-11 Score=108.71 Aligned_cols=110 Identities=15% Similarity=0.174 Sum_probs=86.0
Q ss_pred CCCCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHH
Q 021730 24 SHFQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQ 103 (308)
Q Consensus 24 ~~~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 103 (308)
-.+.++.|+++||+..+..+|+.+...|+.+||+|++.|++.+|-- +.+ ....+..+..+...+.
T Consensus 40 g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~S-------d~P--------~~~~~Yt~~~l~~di~ 104 (322)
T KOG4178|consen 40 GPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFS-------DAP--------PHISEYTIDELVGDIV 104 (322)
T ss_pred cCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCC-------CCC--------CCcceeeHHHHHHHHH
Confidence 3457888999999999999999999999999999999776655411 111 1212223445555556
Q ss_pred HHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCC
Q 021730 104 KAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHL 149 (308)
Q Consensus 104 ~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~ 149 (308)
.+.+..+.++++++||++|++++..++..+++ +|+++|++..|+.
T Consensus 105 ~lld~Lg~~k~~lvgHDwGaivaw~la~~~Pe-rv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 105 ALLDHLGLKKAFLVGHDWGAIVAWRLALFYPE-RVDGLVTLNVPFP 149 (322)
T ss_pred HHHHHhccceeEEEeccchhHHHHHHHHhChh-hcceEEEecCCCC
Confidence 66666678999999999999999999998876 8999999999987
No 46
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.26 E-value=6.4e-11 Score=104.74 Aligned_cols=106 Identities=21% Similarity=0.288 Sum_probs=69.4
Q ss_pred CCCcEEEeCCCCCCchh-HHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNSGD-YQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKA 105 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~-~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 105 (308)
.++||||+||+.++... |..+...|.+.||.|+.+|.+.++.. ... .........+.+.+++ ..+
T Consensus 24 ~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s-------~~~---~~~~~~~~~~~~~~~~----~~~ 89 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYS-------DQP---DDSDELWTIDYFVDEL----EEV 89 (288)
T ss_pred CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCC-------CCC---CcccccccHHHHHHHH----HHH
Confidence 46799999998666554 45666666666999998765544311 100 0000012234444444 444
Q ss_pred HHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCC
Q 021730 106 KEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTP 147 (308)
Q Consensus 106 ~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP 147 (308)
.++.+.++++++||||||.++..++..++. +|+++|++++.
T Consensus 90 ~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~-~v~~lvl~~~~ 130 (288)
T TIGR01250 90 REKLGLDKFYLLGHSWGGMLAQEYALKYGQ-HLKGLIISSML 130 (288)
T ss_pred HHHcCCCcEEEEEeehHHHHHHHHHHhCcc-ccceeeEeccc
Confidence 444556789999999999999999998764 79999988753
No 47
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.25 E-value=7.5e-11 Score=94.49 Aligned_cols=92 Identities=22% Similarity=0.321 Sum_probs=70.5
Q ss_pred cEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHH-h
Q 021730 30 PAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKE-F 108 (308)
Q Consensus 30 pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~-~ 108 (308)
+|||+||++++...|..+++.|.++||.|+.++.+..+... ..+++.+.++.+.+ .
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~ 57 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSD-----------------------GADAVERVLADIRAGY 57 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSH-----------------------HSHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccc-----------------------hhHHHHHHHHHHHhhc
Confidence 68999999999999999999999999999986544332110 01234444444322 2
Q ss_pred CCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 109 TPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 109 ~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
....++.++||||||.++..++.+. .+|+++|++++
T Consensus 58 ~~~~~i~l~G~S~Gg~~a~~~~~~~--~~v~~~v~~~~ 93 (145)
T PF12695_consen 58 PDPDRIILIGHSMGGAIAANLAARN--PRVKAVVLLSP 93 (145)
T ss_dssp CTCCEEEEEEETHHHHHHHHHHHHS--TTESEEEEESE
T ss_pred CCCCcEEEEEEccCcHHHHHHhhhc--cceeEEEEecC
Confidence 3568999999999999999999885 47999999987
No 48
>PRK06489 hypothetical protein; Provisional
Probab=99.24 E-value=3.4e-11 Score=112.08 Aligned_cols=109 Identities=17% Similarity=0.166 Sum_probs=69.4
Q ss_pred CCcEEEeCCCCCCchhHH--HHHHHHH-------hCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHH
Q 021730 28 CRPAVILPGLGNNSGDYQ--RLQLTLK-------DYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRM 98 (308)
Q Consensus 28 ~~pvvlvHG~~~~~~~~~--~l~~~L~-------~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l 98 (308)
++||||+||++++...|. .+.+.|. ..+|.|+.+|++.++... .......... ....++.+++++
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~-----~p~~~~~~~~-~~~~~~~~a~~~ 142 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSS-----KPSDGLRAAF-PRYDYDDMVEAQ 142 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCC-----CCCcCCCCCC-CcccHHHHHHHH
Confidence 678999999999988886 6666652 356999997665543111 0000000000 011233333333
Q ss_pred HHHHHHHHHhCCCCeEE-EEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 99 NDAIQKAKEFTPGGKLS-LIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 99 ~~~i~~l~~~~~~~~v~-lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
.+. +.++.+.++++ +|||||||.+++.++.++|. +|+++|++++
T Consensus 143 ~~~---l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~-~V~~LVLi~s 187 (360)
T PRK06489 143 YRL---VTEGLGVKHLRLILGTSMGGMHAWMWGEKYPD-FMDALMPMAS 187 (360)
T ss_pred HHH---HHHhcCCCceeEEEEECHHHHHHHHHHHhCch-hhheeeeecc
Confidence 222 33445567775 89999999999999999875 8999999976
No 49
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.23 E-value=2.3e-10 Score=102.48 Aligned_cols=107 Identities=14% Similarity=0.107 Sum_probs=76.9
Q ss_pred CCCcEEEeCCCCC----CchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGN----NSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAI 102 (308)
Q Consensus 27 ~~~pvvlvHG~~~----~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i 102 (308)
.+++||++||... +...|..+++.|.++||.|+.+|++.++- +.+ .....+.+.+++.+++
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~---S~~------------~~~~~~~~~~d~~~~~ 89 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGD---SEG------------ENLGFEGIDADIAAAI 89 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCC---CCC------------CCCCHHHHHHHHHHHH
Confidence 3457888887553 33456788999999999999976554431 000 0123445668899999
Q ss_pred HHHHHhC-CCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCCC
Q 021730 103 QKAKEFT-PGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHLP 150 (308)
Q Consensus 103 ~~l~~~~-~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~~ 150 (308)
+.+.++. +.++++++||||||+++..++.. . .+|+++|++++++..
T Consensus 90 ~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~-~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 90 DAFREAAPHLRRIVAWGLCDAASAALLYAPA-D-LRVAGLVLLNPWVRT 136 (274)
T ss_pred HHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-C-CCccEEEEECCccCC
Confidence 9887655 34789999999999999998765 2 479999999877543
No 50
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.23 E-value=2.5e-11 Score=104.65 Aligned_cols=95 Identities=17% Similarity=0.196 Sum_probs=67.4
Q ss_pred CCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHH
Q 021730 28 CRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKE 107 (308)
Q Consensus 28 ~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~ 107 (308)
+++|||+||++++...|..+++.|.+ +|.|+..|++.++.. +. . ....+ +++.+.+...
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s-------~~------~-~~~~~----~~~~~~~~~~-- 62 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRS-------RG------F-GPLSL----ADAAEAIAAQ-- 62 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccC-------CC------C-CCcCH----HHHHHHHHHh--
Confidence 37899999999999999999999976 599998665444310 00 0 01122 2233333322
Q ss_pred hCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 108 FTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 108 ~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
. .+++++|||||||.++..++.+++. +|+++|++++
T Consensus 63 -~-~~~~~lvG~S~Gg~~a~~~a~~~p~-~v~~~il~~~ 98 (245)
T TIGR01738 63 -A-PDPAIWLGWSLGGLVALHIAATHPD-RVRALVTVAS 98 (245)
T ss_pred -C-CCCeEEEEEcHHHHHHHHHHHHCHH-hhheeeEecC
Confidence 2 3689999999999999999988764 7999998865
No 51
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.19 E-value=5.9e-11 Score=109.72 Aligned_cols=101 Identities=11% Similarity=0.057 Sum_probs=68.4
Q ss_pred CCcEEEeCCCCCCch------------hHHHHHH---HHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHH
Q 021730 28 CRPAVILPGLGNNSG------------DYQRLQL---TLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLD 92 (308)
Q Consensus 28 ~~pvvlvHG~~~~~~------------~~~~l~~---~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~ 92 (308)
+.|+||+||+.++.. .|..++. .|...+|.|+.+|++.++ + + .+ .....+
T Consensus 57 ~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g--~---s---~~-------~~~~~~ 121 (343)
T PRK08775 57 GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGAD--G---S---LD-------VPIDTA 121 (343)
T ss_pred CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCC--C---C---CC-------CCCCHH
Confidence 557888877777655 5777876 575446999997765432 1 0 00 011233
Q ss_pred HHHHHHHHHHHHHHHhCCCCe-EEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 93 WYFSRMNDAIQKAKEFTPGGK-LSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 93 ~~~~~l~~~i~~l~~~~~~~~-v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
.+.+++.+.+++ .+.++ +++|||||||+++..++.+++. +|+++|++++..
T Consensus 122 ~~a~dl~~ll~~----l~l~~~~~lvG~SmGG~vA~~~A~~~P~-~V~~LvLi~s~~ 173 (343)
T PRK08775 122 DQADAIALLLDA----LGIARLHAFVGYSYGALVGLQFASRHPA-RVRTLVVVSGAH 173 (343)
T ss_pred HHHHHHHHHHHH----cCCCcceEEEEECHHHHHHHHHHHHChH-hhheEEEECccc
Confidence 344555554444 45555 5799999999999999999875 899999998754
No 52
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.19 E-value=1.2e-09 Score=103.42 Aligned_cols=106 Identities=10% Similarity=0.084 Sum_probs=67.8
Q ss_pred CCCcEEEeCCCCCCc-hhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNS-GDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKA 105 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~-~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 105 (308)
+.+.||++||+.+.. ..|..+++.|.++||.|+.+|.+.++... + .. . ...... ....+++.+
T Consensus 193 ~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~---~---~~-----~--~~d~~~---~~~avld~l 256 (414)
T PRK05077 193 PFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSS---K---WK-----L--TQDSSL---LHQAVLNAL 256 (414)
T ss_pred CccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCC---C---CC-----c--cccHHH---HHHHHHHHH
Confidence 344455555655543 56778899999999999996655432110 0 00 0 011111 123444544
Q ss_pred HHhC--CCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCC
Q 021730 106 KEFT--PGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHL 149 (308)
Q Consensus 106 ~~~~--~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~ 149 (308)
.... ..+++.++||||||.++..++..++. +|+++|+++++..
T Consensus 257 ~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~-ri~a~V~~~~~~~ 301 (414)
T PRK05077 257 PNVPWVDHTRVAAFGFRFGANVAVRLAYLEPP-RLKAVACLGPVVH 301 (414)
T ss_pred HhCcccCcccEEEEEEChHHHHHHHHHHhCCc-CceEEEEECCccc
Confidence 4321 34789999999999999998877554 7999999998864
No 53
>PRK11460 putative hydrolase; Provisional
Probab=99.19 E-value=1.9e-09 Score=94.29 Aligned_cols=116 Identities=13% Similarity=0.129 Sum_probs=70.4
Q ss_pred CCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCccccccc--CCCC---CcHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRAT--LRPR---PVLDWYFSRMND 100 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~--~~~~---~~~~~~~~~l~~ 100 (308)
..++.||++||++++...|..+++.|.+.++.+..+.+......+...+ ..|... .... ..++...+.+.+
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g----~~W~~~~~~~~~~~~~~~~~~~~~l~~ 89 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAG----RQWFSVQGITEDNRQARVAAIMPTFIE 89 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCC----cccccCCCCCccchHHHHHHHHHHHHH
Confidence 3467899999999999999999999998766554444332211110000 001100 0000 112223344555
Q ss_pred HHHHHHHhCC--CCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 101 AIQKAKEFTP--GGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 101 ~i~~l~~~~~--~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
.++.+..+.+ .++++++||||||.++..++..++. .+..+|.+++
T Consensus 90 ~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~-~~~~vv~~sg 136 (232)
T PRK11460 90 TVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPG-LAGRVIAFSG 136 (232)
T ss_pred HHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCC-cceEEEEecc
Confidence 5666555443 3689999999999999998877543 5666776644
No 54
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.18 E-value=7.4e-11 Score=109.38 Aligned_cols=117 Identities=12% Similarity=0.133 Sum_probs=73.6
Q ss_pred CCCcEEEeCCCCCCch-----------hHHHHH---HHHHhCCCcEEEEeecccccccccCCCCCccc--ccccCCCCCc
Q 021730 27 QCRPAVILPGLGNNSG-----------DYQRLQ---LTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNY--WRATLRPRPV 90 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~-----------~~~~l~---~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~--~~~~~~~~~~ 90 (308)
.+++|||+||++++.. .|..++ ..|...+|.|+..|++.+.+............ +.... ....
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~-~~~~ 108 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDF-PLIT 108 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCC-CCCc
Confidence 3568999999999764 366665 36666789999866554211111000000000 00000 0112
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCe-EEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCC
Q 021730 91 LDWYFSRMNDAIQKAKEFTPGGK-LSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHL 149 (308)
Q Consensus 91 ~~~~~~~l~~~i~~l~~~~~~~~-v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~ 149 (308)
++++.+.+..+.++.+.++ +++|||||||++++.++.+++. +|+++|+++++..
T Consensus 109 ----~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~ 163 (351)
T TIGR01392 109 ----IRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPE-RVRAIVVLATSAR 163 (351)
T ss_pred ----HHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChH-hhheEEEEccCCc
Confidence 3445555555555566777 9999999999999999999765 7999999998653
No 55
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.18 E-value=2.9e-10 Score=109.88 Aligned_cols=112 Identities=18% Similarity=0.149 Sum_probs=82.6
Q ss_pred CCCCcEEEeCCCCCCchhHH-----HHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHH-HHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQ-----RLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYF-SRMN 99 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~-----~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~l~ 99 (308)
..++|||||||+......|+ +++++|.++||+|+.+| |++.... .. . ..++.+. +.+.
T Consensus 186 ~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iD-----wrgpg~s--~~--------~-~~~ddY~~~~i~ 249 (532)
T TIGR01838 186 VHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVIS-----WRNPDAS--QA--------D-KTFDDYIRDGVI 249 (532)
T ss_pred CCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEE-----CCCCCcc--cc--------c-CChhhhHHHHHH
Confidence 47899999999998888886 89999999999999865 4432111 00 0 1133333 5688
Q ss_pred HHHHHHHHhCCCCeEEEEEEChHHHHHHH----HHHHhCCCCccEEEEecCCCCCCCC
Q 021730 100 DAIQKAKEFTPGGKLSLIGHSAGGWLARV----YMEEFGSSDISLLLTLGTPHLPPPK 153 (308)
Q Consensus 100 ~~i~~l~~~~~~~~v~lvGHSmGG~va~~----~~~~~~~~~v~~lv~lgtP~~~~~~ 153 (308)
++|+.+.+..+.+++++|||||||.++.. ++....+.+|++++++++|..-...
T Consensus 250 ~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~ 307 (532)
T TIGR01838 250 AALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDP 307 (532)
T ss_pred HHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCc
Confidence 88898888788899999999999998632 3444334579999999998765543
No 56
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.16 E-value=3.5e-10 Score=101.32 Aligned_cols=108 Identities=15% Similarity=0.125 Sum_probs=73.2
Q ss_pred CCCCcEEEeCCCCCCc-hhHH-HHHHHHH-hCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNS-GDYQ-RLQLTLK-DYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAI 102 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~-~~~~-~l~~~L~-~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i 102 (308)
..++++|+|||+.++. ..|. .+++.+. +.+|.|+.+| |.+.. ...+.. . ........+++.+.|
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD-----~~~~~--~~~y~~--a----~~~~~~v~~~la~~l 100 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVD-----WGRGA--NPNYPQ--A----VNNTRVVGAELAKFL 100 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEE-----Ccccc--ccChHH--H----HHhHHHHHHHHHHHH
Confidence 4577899999999887 5665 4565554 4679999865 43311 001110 0 012333346677777
Q ss_pred HHHHHh--CCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCC
Q 021730 103 QKAKEF--TPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTP 147 (308)
Q Consensus 103 ~~l~~~--~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP 147 (308)
+.+.++ .+.+++++|||||||.++..++..++. +|++++.|.+.
T Consensus 101 ~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~-~v~~iv~LDPa 146 (275)
T cd00707 101 DFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNG-KLGRITGLDPA 146 (275)
T ss_pred HHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcC-ccceeEEecCC
Confidence 777665 345789999999999999999888765 89999999753
No 57
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.14 E-value=1.7e-10 Score=104.92 Aligned_cols=104 Identities=19% Similarity=0.126 Sum_probs=68.8
Q ss_pred CCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHH
Q 021730 28 CRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKE 107 (308)
Q Consensus 28 ~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~ 107 (308)
++||||+||+.++... ..+...+...+|+|+.+|++.++.. +.. ... ..... +++.+.+..+.+
T Consensus 27 ~~~lvllHG~~~~~~~-~~~~~~~~~~~~~vi~~D~~G~G~S-------~~~---~~~-~~~~~----~~~~~dl~~l~~ 90 (306)
T TIGR01249 27 GKPVVFLHGGPGSGTD-PGCRRFFDPETYRIVLFDQRGCGKS-------TPH---ACL-EENTT----WDLVADIEKLRE 90 (306)
T ss_pred CCEEEEECCCCCCCCC-HHHHhccCccCCEEEEECCCCCCCC-------CCC---CCc-ccCCH----HHHHHHHHHHHH
Confidence 5689999998776544 3444555556799998665544311 110 000 00122 344444555555
Q ss_pred hCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 108 FTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 108 ~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
..+.++++++||||||.++..++.+++. +|+++|++++..
T Consensus 91 ~l~~~~~~lvG~S~GG~ia~~~a~~~p~-~v~~lvl~~~~~ 130 (306)
T TIGR01249 91 KLGIKNWLVFGGSWGSTLALAYAQTHPE-VVTGLVLRGIFL 130 (306)
T ss_pred HcCCCCEEEEEECHHHHHHHHHHHHChH-hhhhheeecccc
Confidence 5566789999999999999999998765 799999998643
No 58
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.12 E-value=2.7e-10 Score=107.81 Aligned_cols=97 Identities=15% Similarity=0.303 Sum_probs=74.9
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeecc--cccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 021730 39 NNSGDYQRLQLTLKDYGVPTVVAEVSR--FDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEFTPGGKLSL 116 (308)
Q Consensus 39 ~~~~~~~~l~~~L~~~G~~v~~~~~~~--~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~v~l 116 (308)
.....|..+++.|.+.||.+ ..++.. +||+. ....+.+++++++.|+++.+..+.++++|
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~-----------------~~~~~~~~~~Lk~lIe~~~~~~g~~kV~L 166 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQ-----------------SNRLPETMDGLKKKLETVYKASGGKKVNI 166 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCccc-----------------cccHHHHHHHHHHHHHHHHHHcCCCCEEE
Confidence 44578889999999999864 333322 33332 01245567899999999988888899999
Q ss_pred EEEChHHHHHHHHHHHhCC---CCccEEEEecCCCCCCCC
Q 021730 117 IGHSAGGWLARVYMEEFGS---SDISLLLTLGTPHLPPPK 153 (308)
Q Consensus 117 vGHSmGG~va~~~~~~~~~---~~v~~lv~lgtP~~~~~~ 153 (308)
|||||||++++.|+..++. ..|+++|+||+||.|+..
T Consensus 167 VGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~Gs~~ 206 (440)
T PLN02733 167 ISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQGAPG 206 (440)
T ss_pred EEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCCCCch
Confidence 9999999999999987654 348999999999998763
No 59
>PRK10566 esterase; Provisional
Probab=99.11 E-value=6.6e-10 Score=97.61 Aligned_cols=112 Identities=14% Similarity=0.134 Sum_probs=72.1
Q ss_pred CCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCC-CCcHHHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRP-RPVLDWYFSRMNDAIQK 104 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~l~~~i~~ 104 (308)
+..+.||++||++++...|..+++.|.++||.|+.++++.++-.. .+. .. ..... ........+++...++.
T Consensus 25 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~--~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~ 97 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARF--SGD--EA---RRLNHFWQILLQNMQEFPTLRAA 97 (249)
T ss_pred CCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccC--CCc--cc---cchhhHHHHHHHHHHHHHHHHHH
Confidence 346789999999999999999999999999999987655432110 000 00 00000 00111224566666777
Q ss_pred HHHhC--CCCeEEEEEEChHHHHHHHHHHHhCCCCccEEE-EecC
Q 021730 105 AKEFT--PGGKLSLIGHSAGGWLARVYMEEFGSSDISLLL-TLGT 146 (308)
Q Consensus 105 l~~~~--~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv-~lgt 146 (308)
+.++. ..+++.++||||||.+++.++.+++. +...+ ++++
T Consensus 98 l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~--~~~~~~~~~~ 140 (249)
T PRK10566 98 IREEGWLLDDRLAVGGASMGGMTALGIMARHPW--VKCVASLMGS 140 (249)
T ss_pred HHhcCCcCccceeEEeecccHHHHHHHHHhCCC--eeEEEEeeCc
Confidence 66542 34789999999999999998877543 54443 4443
No 60
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.08 E-value=1.3e-09 Score=104.78 Aligned_cols=114 Identities=15% Similarity=0.170 Sum_probs=90.4
Q ss_pred CCCCCcEEEeCCCCCCchhHH-----HHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHH
Q 021730 25 HFQCRPAVILPGLGNNSGDYQ-----RLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMN 99 (308)
Q Consensus 25 ~~~~~pvvlvHG~~~~~~~~~-----~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~ 99 (308)
+..+.||||||.+-.....++ +++++|.++||+|+.+ +|+.-. .. .. .-.++.|++.+.
T Consensus 212 ~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflI-----sW~nP~-----~~--~r----~~~ldDYv~~i~ 275 (560)
T TIGR01839 212 QQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFII-----SWRNPD-----KA--HR----EWGLSTYVDALK 275 (560)
T ss_pred CcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEE-----eCCCCC-----hh--hc----CCCHHHHHHHHH
Confidence 467899999999997777774 9999999999999985 455311 00 01 124677888999
Q ss_pred HHHHHHHHhCCCCeEEEEEEChHHHHHHH----HHHHhCCCCccEEEEecCCCCCCCCC
Q 021730 100 DAIQKAKEFTPGGKLSLIGHSAGGWLARV----YMEEFGSSDISLLLTLGTPHLPPPKG 154 (308)
Q Consensus 100 ~~i~~l~~~~~~~~v~lvGHSmGG~va~~----~~~~~~~~~v~~lv~lgtP~~~~~~g 154 (308)
++|+.+.+..+.++|+++||||||.++.. |++.+++.+|++++++++|......|
T Consensus 276 ~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g 334 (560)
T TIGR01839 276 EAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMES 334 (560)
T ss_pred HHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCC
Confidence 99999999889999999999999999987 56655544799999999999866433
No 61
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.08 E-value=8.9e-10 Score=115.16 Aligned_cols=110 Identities=20% Similarity=0.206 Sum_probs=80.8
Q ss_pred CCCCcEEEeCCCCCCchhHHH-----HHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQR-----LQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMND 100 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~-----l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (308)
..++|||||||+..+...|+. +++.|.++||+|+.+| |... +... .. ....++.++..+.+
T Consensus 65 ~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d-----~G~~-----~~~~--~~--~~~~l~~~i~~l~~ 130 (994)
T PRK07868 65 PVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVID-----FGSP-----DKVE--GG--MERNLADHVVALSE 130 (994)
T ss_pred CCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEc-----CCCC-----ChhH--cC--ccCCHHHHHHHHHH
Confidence 467899999999999999985 4899999999999965 3210 1110 00 01234555566666
Q ss_pred HHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCCC
Q 021730 101 AIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHLP 150 (308)
Q Consensus 101 ~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~~ 150 (308)
+++.+.... .+++++|||||||+++..|+..+++.+|+++|++++|...
T Consensus 131 ~l~~v~~~~-~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~ 179 (994)
T PRK07868 131 AIDTVKDVT-GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDT 179 (994)
T ss_pred HHHHHHHhh-CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEeccccc
Confidence 766665443 4689999999999999999876566689999999999654
No 62
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=99.08 E-value=7.2e-10 Score=104.08 Aligned_cols=91 Identities=30% Similarity=0.522 Sum_probs=73.0
Q ss_pred hHHHHHHHHHhCCCc----EEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHhCCCCeEEEEE
Q 021730 43 DYQRLQLTLKDYGVP----TVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEFTPGGKLSLIG 118 (308)
Q Consensus 43 ~~~~l~~~L~~~G~~----v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~v~lvG 118 (308)
.|..+++.|.+.||. +..+ .+|||... ...+.++..|++.|+++.+.. .++|+|||
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~---pYDWR~~~----------------~~~~~~~~~lk~~ie~~~~~~-~~kv~li~ 125 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAA---PYDWRLSP----------------AERDEYFTKLKQLIEEAYKKN-GKKVVLIA 125 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEE---eechhhch----------------hhHHHHHHHHHHHHHHHHHhc-CCcEEEEE
Confidence 588999999999996 3333 38998521 124456788999999988766 88999999
Q ss_pred EChHHHHHHHHHHHhCC-----CCccEEEEecCCCCCCCC
Q 021730 119 HSAGGWLARVYMEEFGS-----SDISLLLTLGTPHLPPPK 153 (308)
Q Consensus 119 HSmGG~va~~~~~~~~~-----~~v~~lv~lgtP~~~~~~ 153 (308)
|||||++++.++..... +.|+++|+||+|+.|+..
T Consensus 126 HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs~~ 165 (389)
T PF02450_consen 126 HSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGGSPK 165 (389)
T ss_pred eCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCCChH
Confidence 99999999999987643 369999999999988753
No 63
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.07 E-value=2e-09 Score=101.47 Aligned_cols=107 Identities=14% Similarity=0.178 Sum_probs=71.8
Q ss_pred CCCCcEEEeCCCCCCc--hhHHH-HHHHHHh--CCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNS--GDYQR-LQLTLKD--YGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMND 100 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~--~~~~~-l~~~L~~--~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (308)
..++++|+|||+.++. ..|.. +++.|.+ ..+.|+++| |.+.+.. .+.. . ........+++++
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VD-----w~g~g~s--~y~~--a----~~~t~~vg~~la~ 105 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVD-----WLSRAQQ--HYPT--S----AAYTKLVGKDVAK 105 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEE-----CCCcCCC--CCcc--c----cccHHHHHHHHHH
Confidence 3578999999998754 45664 7776653 258898855 5442211 1110 0 1123334566777
Q ss_pred HHHHHHHhC--CCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 101 AIQKAKEFT--PGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 101 ~i~~l~~~~--~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
.|+.+.++. +.++++||||||||.++..++...+ .+|.+++.+.+
T Consensus 106 lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p-~rV~rItgLDP 152 (442)
T TIGR03230 106 FVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTK-HKVNRITGLDP 152 (442)
T ss_pred HHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCC-cceeEEEEEcC
Confidence 777765433 4589999999999999999887655 47999999976
No 64
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.03 E-value=1.1e-09 Score=102.74 Aligned_cols=116 Identities=10% Similarity=0.123 Sum_probs=70.7
Q ss_pred CCCcEEEeCCCCCCchh-------------HHHHHH---HHHhCCCcEEEEeecccccccccCCCCCcc---cccccCCC
Q 021730 27 QCRPAVILPGLGNNSGD-------------YQRLQL---TLKDYGVPTVVAEVSRFDWLRNAAGLVDPN---YWRATLRP 87 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~-------------~~~l~~---~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~---~~~~~~~~ 87 (308)
.+++|||+||++++... |..++. .|...+|.|+.+|+.+.............. .+...+ +
T Consensus 47 ~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~-~ 125 (379)
T PRK00175 47 RSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDF-P 125 (379)
T ss_pred CCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCC-C
Confidence 36789999999999875 555552 443557999987755321100000000000 000000 0
Q ss_pred CCcHHHHHHHHHHHHHHHHHhCCCCe-EEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 88 RPVLDWYFSRMNDAIQKAKEFTPGGK-LSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 88 ~~~~~~~~~~l~~~i~~l~~~~~~~~-v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
...++ ++.+.+..+.+..+.++ +++|||||||++++.++.+++. +|+++|++++..
T Consensus 126 ~~~~~----~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~-~v~~lvl~~~~~ 182 (379)
T PRK00175 126 VITIR----DWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPD-RVRSALVIASSA 182 (379)
T ss_pred cCCHH----HHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChH-hhhEEEEECCCc
Confidence 12343 34444444444456677 5999999999999999999875 899999998754
No 65
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.03 E-value=5.1e-09 Score=101.93 Aligned_cols=158 Identities=22% Similarity=0.259 Sum_probs=94.9
Q ss_pred CCCCCcEEEeCCCCCCchhHHHHHHHHHh---CCCc--EEEE-eecccccccccCCCCCcccccccCCCCCcHHHHHHHH
Q 021730 25 HFQCRPAVILPGLGNNSGDYQRLQLTLKD---YGVP--TVVA-EVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRM 98 (308)
Q Consensus 25 ~~~~~pvvlvHG~~~~~~~~~~l~~~L~~---~G~~--v~~~-~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l 98 (308)
+-++.||+|++|..++...-+.++..... .|+. .... ....+||... +.+.....+ ......++.|.+
T Consensus 86 elsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaV-----DFnEe~tAm-~G~~l~dQtEYV 159 (973)
T KOG3724|consen 86 ELSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAV-----DFNEEFTAM-HGHILLDQTEYV 159 (973)
T ss_pred cCCCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEE-----cccchhhhh-ccHhHHHHHHHH
Confidence 45789999999999999888877776653 1111 0000 0112344431 111111111 113455567888
Q ss_pred HHHHHHHHHhCCC---------CeEEEEEEChHHHHHHHHHHH--hCCCCccEEEEecCCCCCCCCCcchhhhhhhhHHH
Q 021730 99 NDAIQKAKEFTPG---------GKLSLIGHSAGGWLARVYMEE--FGSSDISLLLTLGTPHLPPPKGLPWVIDQTRGLLN 167 (308)
Q Consensus 99 ~~~i~~l~~~~~~---------~~v~lvGHSmGG~va~~~~~~--~~~~~v~~lv~lgtP~~~~~~g~~~~~~~~~~~~~ 167 (308)
.++|+.+++.+.. +.|+||||||||+||+..+.- +-+..|+.++++++||..++....+.+- .+..
T Consensus 160 ~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a~Pl~~D~~l~---~fy~ 236 (973)
T KOG3724|consen 160 NDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAAPPLPLDRFLL---RFYL 236 (973)
T ss_pred HHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccCCCCCCcHHHH---HHHH
Confidence 8888888755432 459999999999999997763 2334599999999999887754332221 1112
Q ss_pred HHHHhcc------CCCCCCCcEEEEEeecc
Q 021730 168 YVEKQCS------KAIYTPELKYVCIAGRY 191 (308)
Q Consensus 168 ~~~~~~p------~~~~~~~~~~~~iag~~ 191 (308)
.+++.|. ...+..++-+++|+|..
T Consensus 237 ~vnn~W~k~~~~~~~~~ls~V~vVSisGG~ 266 (973)
T KOG3724|consen 237 LVNNYWNKLQNNNSDPLLSHVGVVSISGGI 266 (973)
T ss_pred HHHHHHHHHHhccccchhcceEEEEEecCc
Confidence 2332222 22333567789999975
No 66
>PRK07581 hypothetical protein; Validated
Probab=99.02 E-value=6e-10 Score=102.67 Aligned_cols=114 Identities=7% Similarity=0.006 Sum_probs=69.4
Q ss_pred CcEEEeCCCCCCchhHHHHH---HHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHH
Q 021730 29 RPAVILPGLGNNSGDYQRLQ---LTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKA 105 (308)
Q Consensus 29 ~pvvlvHG~~~~~~~~~~l~---~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 105 (308)
++|||+||++++...|..++ +.|...+|+|+..|++.++....... ....+ +....+ ...+.+++......+
T Consensus 42 ~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~-~~~~~---~~~~~~-~~~~~~~~~~~~~~l 116 (339)
T PRK07581 42 NAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSN-TPAPF---NAARFP-HVTIYDNVRAQHRLL 116 (339)
T ss_pred CEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCC-CCCCC---CCCCCC-ceeHHHHHHHHHHHH
Confidence 45666677776666665544 46766679999987766653210000 00000 000000 001234555544445
Q ss_pred HHhCCCCe-EEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 106 KEFTPGGK-LSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 106 ~~~~~~~~-v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
.+..+.++ ++||||||||+++..++.++|. +|+++|++++..
T Consensus 117 ~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~-~V~~Lvli~~~~ 159 (339)
T PRK07581 117 TEKFGIERLALVVGWSMGAQQTYHWAVRYPD-MVERAAPIAGTA 159 (339)
T ss_pred HHHhCCCceEEEEEeCHHHHHHHHHHHHCHH-HHhhheeeecCC
Confidence 55567788 5799999999999999999875 899999997644
No 67
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.02 E-value=1.6e-09 Score=117.79 Aligned_cols=109 Identities=13% Similarity=0.184 Sum_probs=75.2
Q ss_pred CCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAK 106 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~ 106 (308)
.+++|||+||++++...|..+++.|.+. |+|+.+|++.+++.... .... ..........+.+.+++.+.++
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~~~-~rVi~~Dl~G~G~S~~~----~~~~-~~~~~~~~si~~~a~~l~~ll~--- 1440 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAISGS-ARCISIDLPGHGGSKIQ----NHAK-ETQTEPTLSVELVADLLYKLIE--- 1440 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhCC-CEEEEEcCCCCCCCCCc----cccc-cccccccCCHHHHHHHHHHHHH---
Confidence 4679999999999999999999999765 99999776655432100 0000 0000011234444444444443
Q ss_pred HhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 107 EFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 107 ~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
+...++++||||||||.++..++.+++. +|+++|++++
T Consensus 1441 -~l~~~~v~LvGhSmGG~iAl~~A~~~P~-~V~~lVlis~ 1478 (1655)
T PLN02980 1441 -HITPGKVTLVGYSMGARIALYMALRFSD-KIEGAVIISG 1478 (1655)
T ss_pred -HhCCCCEEEEEECHHHHHHHHHHHhChH-hhCEEEEECC
Confidence 4456799999999999999999998775 7999998865
No 68
>PLN02606 palmitoyl-protein thioesterase
Probab=99.01 E-value=6.9e-09 Score=92.35 Aligned_cols=108 Identities=22% Similarity=0.289 Sum_probs=76.2
Q ss_pred CCCcEEEeCCCC--CCchhHHHHHHHHHh-CCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLG--NNSGDYQRLQLTLKD-YGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQ 103 (308)
Q Consensus 27 ~~~pvvlvHG~~--~~~~~~~~l~~~L~~-~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 103 (308)
...|||++||++ ++...+..+.+.+.+ .|+.+..+.+.. |+ ..++. .....+++...+.|.
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~ig~-~~---------~~s~~------~~~~~Qv~~vce~l~ 88 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVEIGN-GV---------QDSLF------MPLRQQASIACEKIK 88 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEEECC-Cc---------ccccc------cCHHHHHHHHHHHHh
Confidence 467999999999 666688899998864 377666554321 11 01111 123344566666665
Q ss_pred HHHHhCCCCeEEEEEEChHHHHHHHHHHHhCC-CCccEEEEecCCCCCCC
Q 021730 104 KAKEFTPGGKLSLIGHSAGGWLARVYMEEFGS-SDISLLLTLGTPHLPPP 152 (308)
Q Consensus 104 ~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~-~~v~~lv~lgtP~~~~~ 152 (308)
...+ . .+-+++||+|.||+++|.++++.+. ..|+.+|++|+||+|..
T Consensus 89 ~~~~-L-~~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph~Gv~ 136 (306)
T PLN02606 89 QMKE-L-SEGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHAGVA 136 (306)
T ss_pred cchh-h-cCceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcCCcc
Confidence 5322 2 2469999999999999999999876 68999999999999874
No 69
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.01 E-value=8.5e-10 Score=101.55 Aligned_cols=108 Identities=29% Similarity=0.375 Sum_probs=81.3
Q ss_pred CCCcEEEeCCCCCCchhHHHHHHHHHhCCCc---EEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNSGDYQRLQLTLKDYGVP---TVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQ 103 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~---v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 103 (308)
...|+|++||+..+...|..+...+...|+. +..+.++.. + + .. ......+.+.+.|+
T Consensus 58 ~~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~-----~--~~-----------~~~~~~~ql~~~V~ 118 (336)
T COG1075 58 AKEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGG-D-----G--TY-----------SLAVRGEQLFAYVD 118 (336)
T ss_pred CCceEEEEccCcCCcchhhhhhhhhcchHHHhccccccccccc-C-----C--Cc-----------cccccHHHHHHHHH
Confidence 5679999999999999999999998888776 444322111 0 0 00 11112456777788
Q ss_pred HHHHhCCCCeEEEEEEChHHHHHHHHHHHhCC-CCccEEEEecCCCCCCCC
Q 021730 104 KAKEFTPGGKLSLIGHSAGGWLARVYMEEFGS-SDISLLLTLGTPHLPPPK 153 (308)
Q Consensus 104 ~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~-~~v~~lv~lgtP~~~~~~ 153 (308)
++....+.++++||||||||.+++.|+...+. .+|++++++++||.++..
T Consensus 119 ~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt~~ 169 (336)
T COG1075 119 EVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGTEL 169 (336)
T ss_pred HHHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCCCchh
Confidence 88877888999999999999999988887652 479999999999998864
No 70
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.01 E-value=8.9e-09 Score=86.39 Aligned_cols=109 Identities=14% Similarity=0.144 Sum_probs=76.0
Q ss_pred CCCCCCcEEEeCCCCCCch--hHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHH
Q 021730 24 SHFQCRPAVILPGLGNNSG--DYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDA 101 (308)
Q Consensus 24 ~~~~~~pvvlvHG~~~~~~--~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~ 101 (308)
.++....+|++||+-++.. .+..++.+|++.|+.++.+|.+..+ .+.|.+.++ +....++||..+
T Consensus 29 ~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnG---eS~gsf~~G----------n~~~eadDL~sV 95 (269)
T KOG4667|consen 29 ETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNG---ESEGSFYYG----------NYNTEADDLHSV 95 (269)
T ss_pred ccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCC---CcCCccccC----------cccchHHHHHHH
Confidence 3567788999999998754 4568999999999999985433221 223333332 122235889998
Q ss_pred HHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 102 IQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 102 i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
++.+.... .---+++|||-||.++..|+.++.. ++.+|.++.-+
T Consensus 96 ~q~~s~~n-r~v~vi~gHSkGg~Vvl~ya~K~~d--~~~viNcsGRy 139 (269)
T KOG4667|consen 96 IQYFSNSN-RVVPVILGHSKGGDVVLLYASKYHD--IRNVINCSGRY 139 (269)
T ss_pred HHHhccCc-eEEEEEEeecCccHHHHHHHHhhcC--chheEEccccc
Confidence 88875411 1112689999999999999999865 78888876644
No 71
>PLN00021 chlorophyllase
Probab=99.01 E-value=3.4e-09 Score=96.57 Aligned_cols=109 Identities=17% Similarity=0.090 Sum_probs=69.4
Q ss_pred CCCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHH
Q 021730 25 HFQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQK 104 (308)
Q Consensus 25 ~~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 104 (308)
.+..++|||+||++.+...|..+++.|.++||.|+..+...+. + . .............+++.+.++.
T Consensus 49 ~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~--~--------~---~~~~~i~d~~~~~~~l~~~l~~ 115 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLA--G--------P---DGTDEIKDAAAVINWLSSGLAA 115 (313)
T ss_pred CCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcC--C--------C---CchhhHHHHHHHHHHHHhhhhh
Confidence 3566789999999999999999999999999999886533210 0 0 0000000111112223322222
Q ss_pred HHH---hCCCCeEEEEEEChHHHHHHHHHHHhCC----CCccEEEEecC
Q 021730 105 AKE---FTPGGKLSLIGHSAGGWLARVYMEEFGS----SDISLLLTLGT 146 (308)
Q Consensus 105 l~~---~~~~~~v~lvGHSmGG~va~~~~~~~~~----~~v~~lv~lgt 146 (308)
+.. ....+++.++||||||.++..++.+++. .+++++|.+.+
T Consensus 116 ~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldP 164 (313)
T PLN00021 116 VLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDP 164 (313)
T ss_pred hcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecc
Confidence 211 1223689999999999999999987653 25788888854
No 72
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.00 E-value=7.2e-09 Score=89.20 Aligned_cols=115 Identities=17% Similarity=0.140 Sum_probs=73.9
Q ss_pred CCCCcEEEeCCCCCCchhHH---HHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQ---RLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAI 102 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~---~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i 102 (308)
+..+.||++||.+++...+. .+.+.+.+.||.|+..+.+..+.... ....+......... ....++.+.+
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~~~i 83 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNN-----CWDWFFTHHRARGT--GEVESLHQLI 83 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCC-----CCCCCCccccCCCC--ccHHHHHHHH
Confidence 45678999999999888776 46666777899888765443321100 00100000000011 1235567777
Q ss_pred HHHHHhCCC--CeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 103 QKAKEFTPG--GKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 103 ~~l~~~~~~--~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
+.+.+++.. +++.|+||||||.++..++.+++. .+.+++.++++.
T Consensus 84 ~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~-~~~~~~~~~g~~ 130 (212)
T TIGR01840 84 DAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPD-VFAGGASNAGLP 130 (212)
T ss_pred HHHHHhcCcChhheEEEEECHHHHHHHHHHHhCch-hheEEEeecCCc
Confidence 777765543 589999999999999999988765 688887777654
No 73
>PLN02872 triacylglycerol lipase
Probab=98.97 E-value=8.3e-10 Score=103.60 Aligned_cols=116 Identities=17% Similarity=0.160 Sum_probs=75.5
Q ss_pred CCCCcEEEeCCCCCCchhHH------HHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHH-HHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQ------RLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYF-SRM 98 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~------~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~l 98 (308)
..++||+|+||++++...|. .++..|.++||+|+..+.+...+. .|....+.....+. .-.++++. .|+
T Consensus 72 ~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s---~gh~~~~~~~~~fw-~~s~~e~a~~Dl 147 (395)
T PLN02872 72 QRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWS---YGHVTLSEKDKEFW-DWSWQELALYDL 147 (395)
T ss_pred CCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccc---cCCCCCCccchhcc-CCcHHHHHHHHH
Confidence 34689999999999888873 577789999999998654433221 11100000000000 01244444 689
Q ss_pred HHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCC--CCccEEEEecCC
Q 021730 99 NDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGS--SDISLLLTLGTP 147 (308)
Q Consensus 99 ~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~--~~v~~lv~lgtP 147 (308)
.+.|+.+.+.. .+++++|||||||.++..++. ++. .+|+.++++++.
T Consensus 148 ~a~id~i~~~~-~~~v~~VGhS~Gg~~~~~~~~-~p~~~~~v~~~~~l~P~ 196 (395)
T PLN02872 148 AEMIHYVYSIT-NSKIFIVGHSQGTIMSLAALT-QPNVVEMVEAAALLCPI 196 (395)
T ss_pred HHHHHHHHhcc-CCceEEEEECHHHHHHHHHhh-ChHHHHHHHHHHHhcch
Confidence 99999987644 479999999999999986664 333 257777777653
No 74
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.96 E-value=3.8e-09 Score=94.38 Aligned_cols=108 Identities=19% Similarity=0.170 Sum_probs=77.2
Q ss_pred CCCCcEEEeCCCCCCchhHHHHHHHHHhC-CCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQLTLKDY-GVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQK 104 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~~~L~~~-G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 104 (308)
...+|++++||+.++...|..+...|.+. +.+++.+|+++++-..... ..+.....+++...|+.
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~--------------~h~~~~ma~dv~~Fi~~ 115 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT--------------VHNYEAMAEDVKLFIDG 115 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc--------------ccCHHHHHHHHHHHHHH
Confidence 47789999999999999999999999874 5679999988776332111 12234455666666666
Q ss_pred HHHhCCCCeEEEEEEChHH-HHHHHHHHHhCCCCccEEEEec-CCC
Q 021730 105 AKEFTPGGKLSLIGHSAGG-WLARVYMEEFGSSDISLLLTLG-TPH 148 (308)
Q Consensus 105 l~~~~~~~~v~lvGHSmGG-~va~~~~~~~~~~~v~~lv~lg-tP~ 148 (308)
....+...+++|+|||||| .+++.+...++. .+.++|++. +|.
T Consensus 116 v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~-~~~rliv~D~sP~ 160 (315)
T KOG2382|consen 116 VGGSTRLDPVVLLGHSMGGVKVAMAETLKKPD-LIERLIVEDISPG 160 (315)
T ss_pred cccccccCCceecccCcchHHHHHHHHHhcCc-ccceeEEEecCCc
Confidence 6543446799999999999 445555555554 688888876 453
No 75
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.95 E-value=6.6e-09 Score=103.87 Aligned_cols=105 Identities=18% Similarity=0.168 Sum_probs=73.3
Q ss_pred CCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeeccccccccc---CC----C-CCccccc--ccCCCCCcHHHHHHH
Q 021730 28 CRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNA---AG----L-VDPNYWR--ATLRPRPVLDWYFSR 97 (308)
Q Consensus 28 ~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~---~g----~-~~~~~~~--~~~~~~~~~~~~~~~ 97 (308)
.++|||+||++++...|..+++.|.++||.|+.+|++.++.+... .+ . ....|+. .....+.++++.+.|
T Consensus 449 ~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~D 528 (792)
T TIGR03502 449 WPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILD 528 (792)
T ss_pred CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHH
Confidence 458999999999999999999999999999999877655533110 00 0 0001110 001112357777888
Q ss_pred HHHHHHHHH------Hh------CCCCeEEEEEEChHHHHHHHHHHH
Q 021730 98 MNDAIQKAK------EF------TPGGKLSLIGHSAGGWLARVYMEE 132 (308)
Q Consensus 98 l~~~i~~l~------~~------~~~~~v~lvGHSmGG~va~~~~~~ 132 (308)
+......+. .+ ++..+++++||||||++++.|+..
T Consensus 529 ll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 529 LLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 887777665 22 446799999999999999999985
No 76
>PRK05855 short chain dehydrogenase; Validated
Probab=98.94 E-value=3.1e-09 Score=104.55 Aligned_cols=107 Identities=13% Similarity=0.123 Sum_probs=71.5
Q ss_pred CCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAK 106 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~ 106 (308)
.+++|||+||++++...|..+.+.| ..||.|+.+|++.++... .+. .......+.+.+++...++.+.
T Consensus 24 ~~~~ivllHG~~~~~~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~-------~~~----~~~~~~~~~~a~dl~~~i~~l~ 91 (582)
T PRK05855 24 DRPTVVLVHGYPDNHEVWDGVAPLL-ADRFRVVAYDVRGAGRSS-------APK----RTAAYTLARLADDFAAVIDAVS 91 (582)
T ss_pred CCCeEEEEcCCCchHHHHHHHHHHh-hcceEEEEecCCCCCCCC-------CCC----cccccCHHHHHHHHHHHHHHhC
Confidence 3678999999999999999999999 567999986655443211 000 0001235556677777776642
Q ss_pred HhCCCCeEEEEEEChHHHHHHHHHHHhC-CCCccEEEEecCCC
Q 021730 107 EFTPGGKLSLIGHSAGGWLARVYMEEFG-SSDISLLLTLGTPH 148 (308)
Q Consensus 107 ~~~~~~~v~lvGHSmGG~va~~~~~~~~-~~~v~~lv~lgtP~ 148 (308)
..++++||||||||.++..++.+.. ..++..++.+..|.
T Consensus 92 ---~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~ 131 (582)
T PRK05855 92 ---PDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPS 131 (582)
T ss_pred ---CCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 2346999999999999988876521 12355555555554
No 77
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.91 E-value=1.1e-08 Score=91.49 Aligned_cols=115 Identities=19% Similarity=0.154 Sum_probs=81.8
Q ss_pred CCCCCCCcEEEeCCCCCCch--hHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHH
Q 021730 23 TSHFQCRPAVILPGLGNNSG--DYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMND 100 (308)
Q Consensus 23 ~~~~~~~pvvlvHG~~~~~~--~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (308)
+....++.||++||+.++.. .-..|++++.++||.+++ ++||+.+......+ .-.-....+|++.
T Consensus 70 p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv-----~~~Rgcs~~~n~~p--------~~yh~G~t~D~~~ 136 (345)
T COG0429 70 PRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVV-----FHFRGCSGEANTSP--------RLYHSGETEDIRF 136 (345)
T ss_pred ccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEE-----EecccccCCcccCc--------ceecccchhHHHH
Confidence 33445678999999987654 345899999999999998 67887543221111 1111112488999
Q ss_pred HHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCC-CCccEEEEecCCCCC
Q 021730 101 AIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGS-SDISLLLTLGTPHLP 150 (308)
Q Consensus 101 ~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~-~~v~~lv~lgtP~~~ 150 (308)
.++.+++..+..++..||.||||-+...|+.+.+. ..+.+.++++.|+.-
T Consensus 137 ~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl 187 (345)
T COG0429 137 FLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDL 187 (345)
T ss_pred HHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHH
Confidence 99999988899999999999999555555655444 357888888888854
No 78
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.89 E-value=3.2e-08 Score=88.25 Aligned_cols=109 Identities=19% Similarity=0.284 Sum_probs=74.8
Q ss_pred CCCCcEEEeCCCCCCch--hHHHHHHHHHh-CCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSG--DYQRLQLTLKD-YGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAI 102 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~--~~~~l~~~L~~-~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i 102 (308)
....|+|+.||+|.+.. ....+.+.+.+ .|..+..+.+... ..+++. .....+++...+.|
T Consensus 23 ~~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~ig~~----------~~~s~~------~~~~~Qve~vce~l 86 (314)
T PLN02633 23 SVSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEIGNG----------VGDSWL------MPLTQQAEIACEKV 86 (314)
T ss_pred cCCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEECCC----------ccccce------eCHHHHHHHHHHHH
Confidence 45579999999997654 56667777755 3666665544321 111111 12334556666666
Q ss_pred HHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCC-CCccEEEEecCCCCCCC
Q 021730 103 QKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGS-SDISLLLTLGTPHLPPP 152 (308)
Q Consensus 103 ~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~-~~v~~lv~lgtP~~~~~ 152 (308)
....+ .. +-+++||||.||+++|.++++.+. ..|+.+|++|+||+|..
T Consensus 87 ~~~~~-l~-~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~Gv~ 135 (314)
T PLN02633 87 KQMKE-LS-QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAGIS 135 (314)
T ss_pred hhchh-hh-CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCCCee
Confidence 65322 22 469999999999999999999876 67999999999998874
No 79
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.87 E-value=1.8e-08 Score=87.36 Aligned_cols=102 Identities=25% Similarity=0.353 Sum_probs=70.0
Q ss_pred CcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHh
Q 021730 29 RPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEF 108 (308)
Q Consensus 29 ~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~ 108 (308)
+||+++|+.+++...|..|++.|....+.|+.+..+..+ . +. .....++..++... ++++..
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~--~------~~-------~~~~si~~la~~y~---~~I~~~ 62 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRG--D------DE-------PPPDSIEELASRYA---EAIRAR 62 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSC--T------TS-------HEESSHHHHHHHHH---HHHHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCC--C------CC-------CCCCCHHHHHHHHH---HHhhhh
Confidence 589999999999999999999998763556665433221 0 00 01134555544444 444444
Q ss_pred CCCCeEEEEEEChHHHHHHHHHHHh--CCCCccEEEEecCCC
Q 021730 109 TPGGKLSLIGHSAGGWLARVYMEEF--GSSDISLLLTLGTPH 148 (308)
Q Consensus 109 ~~~~~v~lvGHSmGG~va~~~~~~~--~~~~v~~lv~lgtP~ 148 (308)
.+..++.|+|||+||++|...+.+. ....|..+++|.+|.
T Consensus 63 ~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 63 QPEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp TSSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred CCCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCC
Confidence 5556999999999999999988753 234699999999754
No 80
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.87 E-value=1.7e-08 Score=87.83 Aligned_cols=109 Identities=15% Similarity=0.138 Sum_probs=73.3
Q ss_pred CCCCCcEEEeCCCCCCchhHHHHHHHHHhC-CCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHH
Q 021730 25 HFQCRPAVILPGLGNNSGDYQRLQLTLKDY-GVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQ 103 (308)
Q Consensus 25 ~~~~~pvvlvHG~~~~~~~~~~l~~~L~~~-G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 103 (308)
+..++.+++.||.+.+.-+|..+++.|..+ -..|+.+|+ |+++....+.. ..-..+...+|+-+.|+
T Consensus 71 ~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~Dl-----RgHGeTk~~~e-------~dlS~eT~~KD~~~~i~ 138 (343)
T KOG2564|consen 71 ATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDL-----RGHGETKVENE-------DDLSLETMSKDFGAVIK 138 (343)
T ss_pred CCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeec-----cccCccccCCh-------hhcCHHHHHHHHHHHHH
Confidence 456777788899999999999999999875 223545444 44322211111 11235566777777777
Q ss_pred HHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 104 KAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 104 ~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
++-.+. ..+|+||||||||.|+.+.+...--..+.+++.|..
T Consensus 139 ~~fge~-~~~iilVGHSmGGaIav~~a~~k~lpsl~Gl~viDV 180 (343)
T KOG2564|consen 139 ELFGEL-PPQIILVGHSMGGAIAVHTAASKTLPSLAGLVVIDV 180 (343)
T ss_pred HHhccC-CCceEEEeccccchhhhhhhhhhhchhhhceEEEEE
Confidence 775322 368999999999999988776543345888888753
No 81
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.87 E-value=5.8e-09 Score=86.72 Aligned_cols=89 Identities=24% Similarity=0.352 Sum_probs=57.4
Q ss_pred EEEeCCCCCCch-hHH-HHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHh
Q 021730 31 AVILPGLGNNSG-DYQ-RLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEF 108 (308)
Q Consensus 31 vvlvHG~~~~~~-~~~-~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~ 108 (308)
|++|||++++.. -|+ .+.+.|.+. +.|.. .+| ..|..+.+.+.|++.|..+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~-----~~~------------------~~P~~~~W~~~l~~~i~~~--- 53 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQ-----PDW------------------DNPDLDEWVQALDQAIDAI--- 53 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEE-----C--------------------TS--HHHHHHHHHHCCHC----
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEec-----ccc------------------CCCCHHHHHHHHHHHHhhc---
Confidence 689999998754 355 566667665 44443 222 1245665666666666543
Q ss_pred CCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 109 TPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 109 ~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
.++++|||||+||+.++.|+......+|++++++++|.
T Consensus 54 --~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~ 91 (171)
T PF06821_consen 54 --DEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFD 91 (171)
T ss_dssp --TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--S
T ss_pred --CCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCC
Confidence 35799999999999999999654556899999998765
No 82
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=98.85 E-value=2.9e-08 Score=91.66 Aligned_cols=113 Identities=22% Similarity=0.276 Sum_probs=84.0
Q ss_pred CCCCCcEEEeCCCCCCch-hH-HHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHH
Q 021730 25 HFQCRPAVILPGLGNNSG-DY-QRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAI 102 (308)
Q Consensus 25 ~~~~~pvvlvHG~~~~~~-~~-~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i 102 (308)
.+..+.|||+||+.++.. .| ..++..++++||.|++. ..||........ ++-......+|+++++
T Consensus 122 ~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVf-----N~RG~~g~~LtT--------pr~f~ag~t~Dl~~~v 188 (409)
T KOG1838|consen 122 DGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVF-----NHRGLGGSKLTT--------PRLFTAGWTEDLREVV 188 (409)
T ss_pred CCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEE-----CCCCCCCCccCC--------CceeecCCHHHHHHHH
Confidence 456788999999986543 33 48999999999999884 344411110010 1111112358999999
Q ss_pred HHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCC-CccEEEEecCCCCC
Q 021730 103 QKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSS-DISLLLTLGTPHLP 150 (308)
Q Consensus 103 ~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~-~v~~lv~lgtP~~~ 150 (308)
+.+++.+|..++..||.||||.+...|+.+.+.. .+.+.++++.|+..
T Consensus 189 ~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~ 237 (409)
T KOG1838|consen 189 NHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDL 237 (409)
T ss_pred HHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchh
Confidence 9999999999999999999999999999986653 37888899999974
No 83
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.84 E-value=2.4e-08 Score=88.19 Aligned_cols=113 Identities=19% Similarity=0.327 Sum_probs=59.2
Q ss_pred CCCCcEEEeCCCCCCc---hhHHHHHHHHHhC--CCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNS---GDYQRLQLTLKDY--GVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMND 100 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~---~~~~~l~~~L~~~--G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (308)
....|||+.||++.+. ..+..+.+.+++. |..|..+.+.. +.... ....+. .....+++.+.+
T Consensus 3 ~~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~-~~~~D-----~~~s~f------~~v~~Qv~~vc~ 70 (279)
T PF02089_consen 3 PSPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGN-DPSED-----VENSFF------GNVNDQVEQVCE 70 (279)
T ss_dssp TSS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SSS-SHHHH-----HHHHHH------SHHHHHHHHHHH
T ss_pred CCCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEECC-Ccchh-----hhhhHH------HHHHHHHHHHHH
Confidence 3456999999999753 4677777777664 33344443321 11000 000000 112333344444
Q ss_pred HHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCCCCC
Q 021730 101 AIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHLPPP 152 (308)
Q Consensus 101 ~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~~~~ 152 (308)
.++...+. ..-+++||+|.||++.|.++.+++...|+.+|++|+||.|..
T Consensus 71 ~l~~~p~L--~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~Gv~ 120 (279)
T PF02089_consen 71 QLANDPEL--ANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHMGVF 120 (279)
T ss_dssp HHHH-GGG--TT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT-BS
T ss_pred HHhhChhh--hcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcccccc
Confidence 33332221 257999999999999999999988778999999999998864
No 84
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.82 E-value=9.6e-08 Score=79.54 Aligned_cols=102 Identities=18% Similarity=0.222 Sum_probs=80.9
Q ss_pred CcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHh
Q 021730 29 RPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEF 108 (308)
Q Consensus 29 ~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~ 108 (308)
.-+||+-|=++....=..+++.|+++|+.|+.+|-.+|-|.. ..-++...++.+.|+...++
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~------------------rtP~~~a~Dl~~~i~~y~~~ 64 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSE------------------RTPEQTAADLARIIRHYRAR 64 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhh------------------CCHHHHHHHHHHHHHHHHHH
Confidence 357888998888766668999999999999988766555532 23455678999999999998
Q ss_pred CCCCeEEEEEEChHHHHHHHHHHHhCC---CCccEEEEecCCC
Q 021730 109 TPGGKLSLIGHSAGGWLARVYMEEFGS---SDISLLLTLGTPH 148 (308)
Q Consensus 109 ~~~~~v~lvGHSmGG~va~~~~~~~~~---~~v~~lv~lgtP~ 148 (308)
.+.++++|||.|+|+-+.-....+.++ .+|+.+++|+...
T Consensus 65 w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 65 WGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred hCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 899999999999999777666665443 4799999998654
No 85
>PLN02442 S-formylglutathione hydrolase
Probab=98.75 E-value=1.5e-07 Score=84.76 Aligned_cols=121 Identities=14% Similarity=0.142 Sum_probs=73.7
Q ss_pred CCCCcEEEeCCCCCCchhHHH---HHHHHHhCCCcEEEEeecccccccccCCCC---C----cccccccC-C---CCCcH
Q 021730 26 FQCRPAVILPGLGNNSGDYQR---LQLTLKDYGVPTVVAEVSRFDWLRNAAGLV---D----PNYWRATL-R---PRPVL 91 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~---l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~---~----~~~~~~~~-~---~~~~~ 91 (308)
...|.|+|+||+.++...|.. +.+.+...|+.|+..+....+.+. .+.. + .+.+.... . .....
T Consensus 45 ~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (283)
T PLN02442 45 GKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNV--EGEADSWDFGVGAGFYLNATQEKWKNWRMY 122 (283)
T ss_pred CCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCC--CCCccccccCCCcceeeccccCCCcccchh
Confidence 456778888999998887754 446667789888776543221100 0000 0 00000000 0 00122
Q ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCC
Q 021730 92 DWYFSRMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHL 149 (308)
Q Consensus 92 ~~~~~~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~ 149 (308)
+...+++...++........+++.++||||||.++..++.+++. ++++++++++...
T Consensus 123 ~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~-~~~~~~~~~~~~~ 179 (283)
T PLN02442 123 DYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPD-KYKSVSAFAPIAN 179 (283)
T ss_pred hhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCch-hEEEEEEECCccC
Confidence 33445666666665444456789999999999999999998765 7898888876543
No 86
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.74 E-value=4.5e-07 Score=76.38 Aligned_cols=88 Identities=18% Similarity=0.291 Sum_probs=56.4
Q ss_pred EEEeCCCCCCchhHH--HHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHh
Q 021730 31 AVILPGLGNNSGDYQ--RLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEF 108 (308)
Q Consensus 31 vvlvHG~~~~~~~~~--~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~ 108 (308)
|+++|||.+++.+.. .+.+.+.+.+..+.... .+ .+ ...+..++.+. ++.++
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~---p~----------l~---------~~p~~a~~~l~----~~i~~ 55 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPC---PD----------LP---------PFPEEAIAQLE----QLIEE 55 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEEC---CC----------CC---------cCHHHHHHHHH----HHHHh
Confidence 799999999987765 67788888765543221 11 00 11222233333 33333
Q ss_pred CCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 109 TPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 109 ~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
...+.+.|||+||||..|..++.+++ +++ |+|.+.+
T Consensus 56 ~~~~~~~liGSSlGG~~A~~La~~~~---~~a-vLiNPav 91 (187)
T PF05728_consen 56 LKPENVVLIGSSLGGFYATYLAERYG---LPA-VLINPAV 91 (187)
T ss_pred CCCCCeEEEEEChHHHHHHHHHHHhC---CCE-EEEcCCC
Confidence 44556999999999999999988875 344 6776544
No 87
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=98.70 E-value=3.4e-07 Score=82.02 Aligned_cols=120 Identities=17% Similarity=0.116 Sum_probs=65.2
Q ss_pred CCCcEEEeCCCCCCchhHHHH--HHHH-HhCCCcEEEEeeccccccccc------CCCCCcccccccCCC-CCcHHHHHH
Q 021730 27 QCRPAVILPGLGNNSGDYQRL--QLTL-KDYGVPTVVAEVSRFDWLRNA------AGLVDPNYWRATLRP-RPVLDWYFS 96 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~~~~l--~~~L-~~~G~~v~~~~~~~~d~~~~~------~g~~~~~~~~~~~~~-~~~~~~~~~ 96 (308)
+.+.|+|+||++++...|... ...+ .+.|+.|+..+....+..... .|....-+......+ ..... ..+
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~-~~~ 119 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYR-MYS 119 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccch-HHH
Confidence 467889999999998888643 2344 457888888664211110000 000000000000000 00011 122
Q ss_pred HHHHHHHHHHHh---CCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 97 RMNDAIQKAKEF---TPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 97 ~l~~~i~~l~~~---~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
.+.+.|..+.++ ...+++.++||||||.++..++.+++. .+++++++++..
T Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~-~~~~~~~~~~~~ 173 (275)
T TIGR02821 120 YIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPD-RFKSVSAFAPIV 173 (275)
T ss_pred HHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcc-cceEEEEECCcc
Confidence 232233332222 234689999999999999999998765 688888876543
No 88
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=98.69 E-value=3.3e-08 Score=94.81 Aligned_cols=97 Identities=22% Similarity=0.302 Sum_probs=73.2
Q ss_pred hHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHhCCCCeEEEEEEChH
Q 021730 43 DYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEFTPGGKLSLIGHSAG 122 (308)
Q Consensus 43 ~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~v~lvGHSmG 122 (308)
.|..+++.|++.||.-..+--..||||... . .....+.++..|++.|+.+....+.++|+|||||||
T Consensus 157 vw~kLIe~L~~iGY~~~nL~gAPYDWRls~------~-------~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMG 223 (642)
T PLN02517 157 VWAVLIANLARIGYEEKNMYMAAYDWRLSF------Q-------NTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMG 223 (642)
T ss_pred eHHHHHHHHHHcCCCCCceeecccccccCc------c-------chhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCc
Confidence 457999999999997333333358888521 0 012346678899999999887777899999999999
Q ss_pred HHHHHHHHHHhC--------------CCCccEEEEecCCCCCCC
Q 021730 123 GWLARVYMEEFG--------------SSDISLLLTLGTPHLPPP 152 (308)
Q Consensus 123 G~va~~~~~~~~--------------~~~v~~lv~lgtP~~~~~ 152 (308)
|++++.|+.... .+.|+++|.|++|+.|+.
T Consensus 224 glv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lGs~ 267 (642)
T PLN02517 224 VLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLGVP 267 (642)
T ss_pred hHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCCcH
Confidence 999999987321 135899999999998864
No 89
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.69 E-value=1.7e-07 Score=81.92 Aligned_cols=112 Identities=15% Similarity=0.229 Sum_probs=72.8
Q ss_pred CCCCCcEEEeCCCCCCchhH-HHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHH
Q 021730 25 HFQCRPAVILPGLGNNSGDY-QRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQ 103 (308)
Q Consensus 25 ~~~~~pvvlvHG~~~~~~~~-~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 103 (308)
...+..+|||||+..+...- ...++-....|+....+ .+.|..... ...|.. ...........+.+.|+
T Consensus 15 ~~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i---~FsWPS~g~---~~~Y~~----d~~~a~~s~~~l~~~L~ 84 (233)
T PF05990_consen 15 SPDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVI---LFSWPSDGS---LLGYFY----DRESARFSGPALARFLR 84 (233)
T ss_pred CCCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEE---EEEcCCCCC---hhhhhh----hhhhHHHHHHHHHHHHH
Confidence 35788999999999886543 34444444455653222 267875321 111211 11234445678888898
Q ss_pred HHHHhCCCCeEEEEEEChHHHHHHHHHHHhC---C-----CCccEEEEecC
Q 021730 104 KAKEFTPGGKLSLIGHSAGGWLARVYMEEFG---S-----SDISLLLTLGT 146 (308)
Q Consensus 104 ~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~---~-----~~v~~lv~lgt 146 (308)
.+....+.++|+||+||||+.+.+..+.... . .++..+|++++
T Consensus 85 ~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~Ap 135 (233)
T PF05990_consen 85 DLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAP 135 (233)
T ss_pred HHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECC
Confidence 8887667899999999999999998877521 1 25678877764
No 90
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.68 E-value=1.4e-07 Score=80.74 Aligned_cols=102 Identities=20% Similarity=0.232 Sum_probs=68.7
Q ss_pred CCcEEEeCCCCCCchhHHHHHHHHHhCC--CcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHH
Q 021730 28 CRPAVILPGLGNNSGDYQRLQLTLKDYG--VPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKA 105 (308)
Q Consensus 28 ~~pvvlvHG~~~~~~~~~~l~~~L~~~G--~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 105 (308)
+++|+++||+.++...|......+.... |+++.+|.+.++.. . . . ......+ .+.+..+
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s-------~-~-----~--~~~~~~~----~~~~~~~ 81 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRS-------D-P-----A--GYSLSAY----ADDLAAL 81 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCC-------C-c-----c--cccHHHH----HHHHHHH
Confidence 4489999999999999998544444422 78887654433211 0 0 0 0112222 3334444
Q ss_pred HHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCC
Q 021730 106 KEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHL 149 (308)
Q Consensus 106 ~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~ 149 (308)
.+..+..+++++||||||.++..++.+++. +++++|+++++..
T Consensus 82 ~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~-~~~~~v~~~~~~~ 124 (282)
T COG0596 82 LDALGLEKVVLVGHSMGGAVALALALRHPD-RVRGLVLIGPAPP 124 (282)
T ss_pred HHHhCCCceEEEEecccHHHHHHHHHhcch-hhheeeEecCCCC
Confidence 444556679999999999999999998776 7999999987653
No 91
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.67 E-value=2.6e-07 Score=80.14 Aligned_cols=106 Identities=20% Similarity=0.312 Sum_probs=74.0
Q ss_pred CcEEEeCCCCCCchh--HHHHHHHHHhC-CCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHH
Q 021730 29 RPAVILPGLGNNSGD--YQRLQLTLKDY-GVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKA 105 (308)
Q Consensus 29 ~pvvlvHG~~~~~~~--~~~l~~~L~~~-G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 105 (308)
.|+|++||++.+..+ +..+.+.+.+. |..|+.+++..--+ . +.+ ....++++...+.|..-
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig~g~~---------~----s~l---~pl~~Qv~~~ce~v~~m 87 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIGDGIK---------D----SSL---MPLWEQVDVACEKVKQM 87 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEecCCcc---------h----hhh---ccHHHHHHHHHHHHhcc
Confidence 789999999988776 88888888884 66677766532200 0 111 11222334444444422
Q ss_pred HHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCCCCC
Q 021730 106 KEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHLPPP 152 (308)
Q Consensus 106 ~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~~~~ 152 (308)
.+ . .+-+++||.|.||+++|.++...+...|+.+|.+|+||.|..
T Consensus 88 ~~-l-sqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gPhaG~~ 132 (296)
T KOG2541|consen 88 PE-L-SQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGPHAGIY 132 (296)
T ss_pred hh-c-cCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCCcCCcc
Confidence 21 2 367999999999999999999877778999999999998764
No 92
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.65 E-value=6.3e-07 Score=77.34 Aligned_cols=122 Identities=12% Similarity=0.136 Sum_probs=60.4
Q ss_pred CCCCCCcEEEeCCCCCCchhHHHHHHHH-HhCCCcEEEEeecccccccccCCCCCccccccc--CCC-----CCcHHHHH
Q 021730 24 SHFQCRPAVILPGLGNNSGDYQRLQLTL-KDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRAT--LRP-----RPVLDWYF 95 (308)
Q Consensus 24 ~~~~~~pvvlvHG~~~~~~~~~~l~~~L-~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~--~~~-----~~~~~~~~ 95 (308)
....++.||++||+|++...+..+.... ......++...-+. .......|. ....|... ... ...++...
T Consensus 10 ~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~-~~~~~~~g~-~~~~Wf~~~~~~~~~~~~~~~i~~s~ 87 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPS-RPVTVPGGY-RMPAWFDIYDFDPEGPEDEAGIEESA 87 (216)
T ss_dssp SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---E-EE-GGGTT--EEE-SS-BSCSSSSSEB-HHHHHHHH
T ss_pred CCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCC-CCccccccc-CCCceeeccCCCcchhhhHHHHHHHH
Confidence 3456778999999999996666555522 11222233221110 000000010 00011100 000 11233334
Q ss_pred HHHHHHHHHHHHh-CCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 96 SRMNDAIQKAKEF-TPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 96 ~~l~~~i~~l~~~-~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
+.+.+.|+...+. .+.++|+|.|+|+||.++..++..++. .+.++|.++...
T Consensus 88 ~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~-~~~gvv~lsG~~ 140 (216)
T PF02230_consen 88 ERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPE-PLAGVVALSGYL 140 (216)
T ss_dssp HHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSS-TSSEEEEES---
T ss_pred HHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCc-CcCEEEEeeccc
Confidence 5566666654432 245789999999999999999988765 799999997633
No 93
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.62 E-value=6.5e-08 Score=82.88 Aligned_cols=52 Identities=25% Similarity=0.447 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCC
Q 021730 95 FSRMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTP 147 (308)
Q Consensus 95 ~~~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP 147 (308)
.+++.+.++.+++..+.+++++|||||||.++..|+..+|. +|+++|+++++
T Consensus 27 ~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~-~v~~lvl~~~~ 78 (230)
T PF00561_consen 27 TDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPE-RVKKLVLISPP 78 (230)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGG-GEEEEEEESES
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCch-hhcCcEEEeee
Confidence 56777778888777888899999999999999999999887 89999999987
No 94
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.58 E-value=2.8e-07 Score=86.54 Aligned_cols=53 Identities=11% Similarity=0.123 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHhCCCCeEE-EEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 95 FSRMNDAIQKAKEFTPGGKLS-LIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 95 ~~~l~~~i~~l~~~~~~~~v~-lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
++++.+.+..+.++.+.+++. +|||||||+++..++.++|. +|+++|++++..
T Consensus 143 ~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~-~v~~lv~ia~~~ 196 (389)
T PRK06765 143 ILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPH-MVERMIGVIGNP 196 (389)
T ss_pred HHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChH-hhheEEEEecCC
Confidence 456666666666667788886 99999999999999999876 799999997644
No 95
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.58 E-value=1.2e-06 Score=77.00 Aligned_cols=104 Identities=16% Similarity=0.190 Sum_probs=74.2
Q ss_pred CCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKA 105 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 105 (308)
.+..+||-+||-.++..+|..+...|.+.|.+++.++++.++.-. + ++ ... ... +.-...++.+
T Consensus 33 s~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~---~---~~--~~~----~~n----~er~~~~~~l 96 (297)
T PF06342_consen 33 SPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTP---G---YP--DQQ----YTN----EERQNFVNAL 96 (297)
T ss_pred CCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCC---C---Cc--ccc----cCh----HHHHHHHHHH
Confidence 345578889999999999999999999999999998887776432 1 11 000 111 2233334444
Q ss_pred HHhCC-CCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 106 KEFTP-GGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 106 ~~~~~-~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
+++.+ .++++++|||.||-.++.++..+ ++.++++|.+|-
T Consensus 97 l~~l~i~~~~i~~gHSrGcenal~la~~~---~~~g~~lin~~G 137 (297)
T PF06342_consen 97 LDELGIKGKLIFLGHSRGCENALQLAVTH---PLHGLVLINPPG 137 (297)
T ss_pred HHHcCCCCceEEEEeccchHHHHHHHhcC---ccceEEEecCCc
Confidence 43333 37899999999999999998876 366899998743
No 96
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.58 E-value=9.4e-07 Score=78.82 Aligned_cols=112 Identities=17% Similarity=0.138 Sum_probs=79.0
Q ss_pred CCcEEEeCCCCCCchhHHHHHHHHHhC---CCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHH
Q 021730 28 CRPAVILPGLGNNSGDYQRLQLTLKDY---GVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQK 104 (308)
Q Consensus 28 ~~pvvlvHG~~~~~~~~~~l~~~L~~~---G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 104 (308)
+..+|+|+|..+-...|..+.+.|.+. .+.|+.+ ++.|....... +... .....-.++++++.-.+.|++
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~i-----sh~Gh~~~~~~-~~~~-~~~~~~sL~~QI~hk~~~i~~ 74 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGI-----SHAGHSTSPSN-SKFS-PNGRLFSLQDQIEHKIDFIKE 74 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEe-----cCCCCcCCccc-cccc-CCCCccCHHHHHHHHHHHHHH
Confidence 456899999999999999999999865 5667764 34432211100 0000 112234577777777777777
Q ss_pred HHHhC--CCCeEEEEEEChHHHHHHHHHHHhC--CCCccEEEEecC
Q 021730 105 AKEFT--PGGKLSLIGHSAGGWLARVYMEEFG--SSDISLLLTLGT 146 (308)
Q Consensus 105 l~~~~--~~~~v~lvGHSmGG~va~~~~~~~~--~~~v~~lv~lgt 146 (308)
...+. +..+++|+|||+|+.+++..+.+.+ ..+|.++++|-+
T Consensus 75 ~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfP 120 (266)
T PF10230_consen 75 LIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFP 120 (266)
T ss_pred HhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCC
Confidence 77654 5789999999999999999999876 357899888854
No 97
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.57 E-value=1.1e-07 Score=88.66 Aligned_cols=117 Identities=20% Similarity=0.207 Sum_probs=84.7
Q ss_pred CCCCcEEEeCCCCCCchhHH------HHHHHHHhCCCcEEEEeecccccccccC--CC-CCcccccccCCCCCcHHHH-H
Q 021730 26 FQCRPAVILPGLGNNSGDYQ------RLQLTLKDYGVPTVVAEVSRFDWLRNAA--GL-VDPNYWRATLRPRPVLDWY-F 95 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~------~l~~~L~~~G~~v~~~~~~~~d~~~~~~--g~-~~~~~~~~~~~~~~~~~~~-~ 95 (308)
+.++||++.||+.++...|. .++-.|.++||+|+....+..-|..... .. ....+|.-+ +++. .
T Consensus 71 ~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS------~~Em~~ 144 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFS------WHEMGT 144 (403)
T ss_pred CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecc------hhhhhh
Confidence 77889999999999999996 6788899999999986654433322110 00 011133222 2221 3
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCC--CCccEEEEecCCC
Q 021730 96 SRMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGS--SDISLLLTLGTPH 148 (308)
Q Consensus 96 ~~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~--~~v~~lv~lgtP~ 148 (308)
.||.+.|+.+++..+.++++.||||+|+.+....+...+. .+|+.+++|++.-
T Consensus 145 yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 145 YDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred cCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 4799999999998889999999999999999988876433 4699999998644
No 98
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=98.55 E-value=8.2e-08 Score=89.44 Aligned_cols=95 Identities=24% Similarity=0.393 Sum_probs=75.9
Q ss_pred hhHHHHHHHHHhCCCc----EEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHhCCCCeEEEE
Q 021730 42 GDYQRLQLTLKDYGVP----TVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEFTPGGKLSLI 117 (308)
Q Consensus 42 ~~~~~l~~~L~~~G~~----v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~v~lv 117 (308)
..|..+++.|..-||. ++.+ .||||..- ......++++..|+..|+...+.++.+||+||
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga---~YDwRls~-------------~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvli 187 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGA---PYDWRLSY-------------HNSEERDQYLSKLKKKIETMYKLNGGKKVVLI 187 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeecc---ccchhhcc-------------CChhHHHHHHHHHHHHHHHHHHHcCCCceEEE
Confidence 4678999999999986 4444 38888511 11234677899999999999988888999999
Q ss_pred EEChHHHHHHHHHHHhCC-------CCccEEEEecCCCCCCC
Q 021730 118 GHSAGGWLARVYMEEFGS-------SDISLLLTLGTPHLPPP 152 (308)
Q Consensus 118 GHSmGG~va~~~~~~~~~-------~~v~~lv~lgtP~~~~~ 152 (308)
+|||||++.++++..++. +.|+++|.||.|+.+.+
T Consensus 188 sHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~lG~~ 229 (473)
T KOG2369|consen 188 SHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPWLGSP 229 (473)
T ss_pred ecCCccHHHHHHHhcccccchhHHHHHHHHHHccCchhcCCh
Confidence 999999999999987654 25888999999998764
No 99
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.53 E-value=2.6e-06 Score=73.15 Aligned_cols=95 Identities=13% Similarity=0.085 Sum_probs=61.7
Q ss_pred HHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHhCC--CCeEEEEEECh
Q 021730 44 YQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEFTP--GGKLSLIGHSA 121 (308)
Q Consensus 44 ~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~~~--~~~v~lvGHSm 121 (308)
|....+.|.++||.|+.++++...-.+ ..+ .... ....-...++|+.++++.+.++.. .++|.++|||+
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g-------~~~-~~~~-~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~ 73 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYG-------KDF-HEAG-RGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSY 73 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSH-------HHH-HHTT-TTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccc-------hhH-HHhh-hccccccchhhHHHHHHHHhccccccceeEEEEcccc
Confidence 456778899999999987655432111 000 0000 111222346888888998877643 37999999999
Q ss_pred HHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 122 GGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 122 GG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
||.++..++.+++. +++.+|..++..
T Consensus 74 GG~~a~~~~~~~~~-~f~a~v~~~g~~ 99 (213)
T PF00326_consen 74 GGYLALLAATQHPD-RFKAAVAGAGVS 99 (213)
T ss_dssp HHHHHHHHHHHTCC-GSSEEEEESE-S
T ss_pred cccccchhhcccce-eeeeeeccceec
Confidence 99999998887665 788888776544
No 100
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.51 E-value=1e-06 Score=72.06 Aligned_cols=57 Identities=25% Similarity=0.436 Sum_probs=45.4
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCCCC
Q 021730 89 PVLDWYFSRMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHLPP 151 (308)
Q Consensus 89 ~~~~~~~~~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~~~ 151 (308)
|..+++++.|.+.+..+ .++++||+||+||.++..|+..... +|++++++++|.-..
T Consensus 41 P~~~dWi~~l~~~v~a~-----~~~~vlVAHSLGc~~v~h~~~~~~~-~V~GalLVAppd~~~ 97 (181)
T COG3545 41 PVLDDWIARLEKEVNAA-----EGPVVLVAHSLGCATVAHWAEHIQR-QVAGALLVAPPDVSR 97 (181)
T ss_pred CCHHHHHHHHHHHHhcc-----CCCeEEEEecccHHHHHHHHHhhhh-ccceEEEecCCCccc
Confidence 56666666776666654 3569999999999999999998655 899999999988544
No 101
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=98.50 E-value=5.6e-07 Score=88.51 Aligned_cols=107 Identities=9% Similarity=-0.030 Sum_probs=73.7
Q ss_pred CCCcEEEeCCCCCCch----hHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNSG----DYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAI 102 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~----~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i 102 (308)
+.+.||++||++.+.. ......+.|.++||.|+..|+..++. +.| ... .. . ....+|+.++|
T Consensus 21 ~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~---S~g--~~~----~~---~--~~~~~D~~~~i 86 (550)
T TIGR00976 21 PVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGA---SEG--EFD----LL---G--SDEAADGYDLV 86 (550)
T ss_pred CCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEecccccc---CCC--ceE----ec---C--cccchHHHHHH
Confidence 5677888999997653 22345678889999999866543321 111 111 01 0 22457888888
Q ss_pred HHHHHh-CCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 103 QKAKEF-TPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 103 ~~l~~~-~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
+.+.++ ....+|.++|||+||.++..++..+++ +++++|...+..
T Consensus 87 ~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~-~l~aiv~~~~~~ 132 (550)
T TIGR00976 87 DWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPP-ALRAIAPQEGVW 132 (550)
T ss_pred HHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCC-ceeEEeecCccc
Confidence 888764 223699999999999999998887654 799998776654
No 102
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.49 E-value=8.5e-07 Score=80.27 Aligned_cols=115 Identities=20% Similarity=0.324 Sum_probs=78.7
Q ss_pred CCCCCcEEEeCCCCCCch-hHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHH
Q 021730 25 HFQCRPAVILPGLGNNSG-DYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQ 103 (308)
Q Consensus 25 ~~~~~pvvlvHG~~~~~~-~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 103 (308)
...+..+|||||++.+-. .-...++-..+.|+....+ .+.|..... .++|++.+ ....+...+|+..|+
T Consensus 113 s~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pV---vFSWPS~g~-l~~Yn~Dr------eS~~~Sr~aLe~~lr 182 (377)
T COG4782 113 SSAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPV---VFSWPSRGS-LLGYNYDR------ESTNYSRPALERLLR 182 (377)
T ss_pred cCCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceE---EEEcCCCCe-eeecccch------hhhhhhHHHHHHHHH
Confidence 357889999999997754 3446667677777763322 156765321 34455433 334455688999999
Q ss_pred HHHHhCCCCeEEEEEEChHHHHHHHHHHHhC---C----CCccEEEEecCCCCC
Q 021730 104 KAKEFTPGGKLSLIGHSAGGWLARVYMEEFG---S----SDISLLLTLGTPHLP 150 (308)
Q Consensus 104 ~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~---~----~~v~~lv~lgtP~~~ 150 (308)
.+....+.++|+|++||||.++.+..+.+.. . .+++.+| ++.|--.
T Consensus 183 ~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nVi-LAaPDiD 235 (377)
T COG4782 183 YLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVI-LAAPDID 235 (377)
T ss_pred HHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheE-eeCCCCC
Confidence 9998888899999999999999999887631 1 2356665 4566533
No 103
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.48 E-value=2.6e-06 Score=68.52 Aligned_cols=112 Identities=22% Similarity=0.240 Sum_probs=73.5
Q ss_pred CcEEEeCCCCCCch--hHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHH
Q 021730 29 RPAVILPGLGNNSG--DYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAK 106 (308)
Q Consensus 29 ~pvvlvHG~~~~~~--~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~ 106 (308)
..||+-||-+.+.+ .+...+..|..+|+.|..++++..-.+... ...++.... ...+.+ ...+.++.
T Consensus 15 ~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg--~rkPp~~~~-----t~~~~~----~~~~aql~ 83 (213)
T COG3571 15 VTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTG--RRKPPPGSG-----TLNPEY----IVAIAQLR 83 (213)
T ss_pred EEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhcccc--CCCCcCccc-----cCCHHH----HHHHHHHH
Confidence 45777799998754 577899999999999888764432222211 111111111 112222 22334444
Q ss_pred HhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCCCCC
Q 021730 107 EFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHLPPP 152 (308)
Q Consensus 107 ~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~~~~ 152 (308)
......+.++=||||||-++.+.+.+... .|..++++|-||+..-
T Consensus 84 ~~l~~gpLi~GGkSmGGR~aSmvade~~A-~i~~L~clgYPfhppG 128 (213)
T COG3571 84 AGLAEGPLIIGGKSMGGRVASMVADELQA-PIDGLVCLGYPFHPPG 128 (213)
T ss_pred hcccCCceeeccccccchHHHHHHHhhcC-CcceEEEecCccCCCC
Confidence 43444689999999999999998877544 5999999999998753
No 104
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.48 E-value=1.7e-06 Score=77.33 Aligned_cols=104 Identities=15% Similarity=0.200 Sum_probs=69.9
Q ss_pred CCCcEEEeCCCCCCc---hhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNS---GDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQ 103 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~---~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 103 (308)
.+..||||.|++... .....|++.|.+.|+.++.+-++.. +.| |. ...++.-+++|.++|+
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSS-y~G----------~G-----~~SL~~D~~eI~~~v~ 95 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSS-YSG----------WG-----TSSLDRDVEEIAQLVE 95 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGG-BTT----------S------S--HHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCc-cCC----------cC-----cchhhhHHHHHHHHHH
Confidence 566899999999754 4567899999888999988765421 111 11 1335556799999999
Q ss_pred HHHHhC----CCCeEEEEEEChHHHHHHHHHHHhCC----CCccEEEEecC
Q 021730 104 KAKEFT----PGGKLSLIGHSAGGWLARVYMEEFGS----SDISLLLTLGT 146 (308)
Q Consensus 104 ~l~~~~----~~~~v~lvGHSmGG~va~~~~~~~~~----~~v~~lv~lgt 146 (308)
+++... +.++|+|+|||-|+.-+++|+.+... ..|.++|+-++
T Consensus 96 ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQAp 146 (303)
T PF08538_consen 96 YLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAP 146 (303)
T ss_dssp HHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE
T ss_pred HHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCC
Confidence 998873 46899999999999999999998643 56999987764
No 105
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.43 E-value=1.3e-06 Score=80.49 Aligned_cols=114 Identities=25% Similarity=0.280 Sum_probs=90.1
Q ss_pred CCCCCCcEEEeCCCCCCchhHH-----HHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHH-HH
Q 021730 24 SHFQCRPAVILPGLGNNSGDYQ-----RLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYF-SR 97 (308)
Q Consensus 24 ~~~~~~pvvlvHG~~~~~~~~~-----~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~ 97 (308)
.+.-++|+++||-+-.....++ +++..|.++|.+|+++ +|+.-..+ .. ...++.|+ +.
T Consensus 103 e~v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvI-----sw~nPd~~-------~~----~~~~edYi~e~ 166 (445)
T COG3243 103 EKVLKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVI-----SWRNPDAS-------LA----AKNLEDYILEG 166 (445)
T ss_pred CccCCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEE-----eccCchHh-------hh----hccHHHHHHHH
Confidence 3346889999999888777665 8999999999999985 45541111 11 13455565 89
Q ss_pred HHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCCCCCC
Q 021730 98 MNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHLPPPK 153 (308)
Q Consensus 98 l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~~~~~ 153 (308)
+.++|+.+++..+.++|+++||++||.++..++..++..+|++++++.+|..-...
T Consensus 167 l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~ 222 (445)
T COG3243 167 LSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHA 222 (445)
T ss_pred HHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccc
Confidence 99999999998888999999999999999998887776569999999999876543
No 106
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.42 E-value=2.3e-06 Score=75.45 Aligned_cols=102 Identities=19% Similarity=0.241 Sum_probs=73.7
Q ss_pred CcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHh
Q 021730 29 RPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEF 108 (308)
Q Consensus 29 ~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~ 108 (308)
+|++++|+.++....|..|+..|... ..++.+..+.+. . .......++..+ +..++.+.+.
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~--~-------------~~~~~~~l~~~a---~~yv~~Ir~~ 61 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYG--A-------------GEQPFASLDDMA---AAYVAAIRRV 61 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCccc--c-------------cccccCCHHHHH---HHHHHHHHHh
Confidence 58999999999999999999999887 667665433221 0 001123455443 4444555555
Q ss_pred CCCCeEEEEEEChHHHHHHHHHHHh--CCCCccEEEEecCCCC
Q 021730 109 TPGGKLSLIGHSAGGWLARVYMEEF--GSSDISLLLTLGTPHL 149 (308)
Q Consensus 109 ~~~~~v~lvGHSmGG~va~~~~~~~--~~~~v~~lv~lgtP~~ 149 (308)
.|..+++|+|+|+||.++...+.+. ....|..+++|.++..
T Consensus 62 QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 62 QPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred CCCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 7788999999999999999988763 2346999999998765
No 107
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.42 E-value=1.8e-06 Score=75.81 Aligned_cols=112 Identities=19% Similarity=0.138 Sum_probs=70.1
Q ss_pred CCCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHH
Q 021730 25 HFQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQK 104 (308)
Q Consensus 25 ~~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 104 (308)
.+.=+.+||+||+......|..+.++++.+||-|+..++-... + .. .. .........++++.+-++.
T Consensus 14 ~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~--~-------~~---~~-~~~~~~~~vi~Wl~~~L~~ 80 (259)
T PF12740_consen 14 AGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIG--G-------PD---DT-DEVASAAEVIDWLAKGLES 80 (259)
T ss_pred CCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccC--C-------CC---cc-hhHHHHHHHHHHHHhcchh
Confidence 5667788888999988888999999999999999885522111 0 00 00 0001111222222222221
Q ss_pred HHH---hCCCCeEEEEEEChHHHHHHHHHHHhC----CCCccEEEEecCCCCC
Q 021730 105 AKE---FTPGGKLSLIGHSAGGWLARVYMEEFG----SSDISLLLTLGTPHLP 150 (308)
Q Consensus 105 l~~---~~~~~~v~lvGHSmGG~va~~~~~~~~----~~~v~~lv~lgtP~~~ 150 (308)
... +-...++.|.|||-||-++...+..+. ..+++.+|+|. |..|
T Consensus 81 ~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lD-PVdG 132 (259)
T PF12740_consen 81 KLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLD-PVDG 132 (259)
T ss_pred hccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEec-cccc
Confidence 110 013468999999999999998887652 23689999885 5654
No 108
>PRK10162 acetyl esterase; Provisional
Probab=98.41 E-value=2.2e-06 Score=78.51 Aligned_cols=102 Identities=15% Similarity=0.087 Sum_probs=65.8
Q ss_pred CCCcEEEeCCCC---CCchhHHHHHHHHHh-CCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLG---NNSGDYQRLQLTLKD-YGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAI 102 (308)
Q Consensus 27 ~~~pvvlvHG~~---~~~~~~~~l~~~L~~-~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i 102 (308)
..+.||++||-+ ++...|..+++.|.+ .|+.|+.++++... +.. + +. .++|...++
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlap---------e~~-----~---p~---~~~D~~~a~ 139 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSP---------EAR-----F---PQ---AIEEIVAVC 139 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCC---------CCC-----C---CC---cHHHHHHHH
Confidence 356799999955 667788889999987 58998886643210 000 0 11 134444444
Q ss_pred HHHHH---hCC--CCeEEEEEEChHHHHHHHHHHHhC-----CCCccEEEEecCCC
Q 021730 103 QKAKE---FTP--GGKLSLIGHSAGGWLARVYMEEFG-----SSDISLLLTLGTPH 148 (308)
Q Consensus 103 ~~l~~---~~~--~~~v~lvGHSmGG~va~~~~~~~~-----~~~v~~lv~lgtP~ 148 (308)
+.+.+ +.+ .++++|+|||+||.++..++.... ..+++++|++.+..
T Consensus 140 ~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 195 (318)
T PRK10162 140 CYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLY 195 (318)
T ss_pred HHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCcc
Confidence 44432 232 368999999999999998876431 13688888876533
No 109
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.37 E-value=1.2e-06 Score=80.51 Aligned_cols=108 Identities=19% Similarity=0.213 Sum_probs=63.3
Q ss_pred CCCCcEEEeCCCCCCc--hhH-HHHHHHHHhC---CCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNS--GDY-QRLQLTLKDY---GVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMN 99 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~--~~~-~~l~~~L~~~---G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~ 99 (308)
..++.+|+||||.++. ..| ..+.+.|.++ ++.|+.+ ||...+.. .+ ... ..+.....+.+.
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~V-----DWs~~a~~--~Y--~~a----~~n~~~vg~~la 135 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVV-----DWSRGASN--NY--PQA----VANTRLVGRQLA 135 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEE-----E-HHHHSS---H--HHH----HHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEE-----cchhhccc--cc--cch----hhhHHHHHHHHH
Confidence 4678899999999887 334 4677766554 6678875 56542211 11 110 012233345566
Q ss_pred HHHHHHHHh--CCCCeEEEEEEChHHHHHHHHHHHhCC-CCccEEEEecC
Q 021730 100 DAIQKAKEF--TPGGKLSLIGHSAGGWLARVYMEEFGS-SDISLLLTLGT 146 (308)
Q Consensus 100 ~~i~~l~~~--~~~~~v~lvGHSmGG~va~~~~~~~~~-~~v~~lv~lgt 146 (308)
+.|..+... .+.++++|||||+|+.|+-........ .+|.+++.|.+
T Consensus 136 ~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDP 185 (331)
T PF00151_consen 136 KFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDP 185 (331)
T ss_dssp HHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-
T ss_pred HHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCc
Confidence 666666533 345899999999999999987666443 47999999975
No 110
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.37 E-value=1.8e-06 Score=73.83 Aligned_cols=98 Identities=17% Similarity=0.132 Sum_probs=67.6
Q ss_pred EEEeCCCC---CCchhHHHHHHHHHh-CCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHH
Q 021730 31 AVILPGLG---NNSGDYQRLQLTLKD-YGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAK 106 (308)
Q Consensus 31 vvlvHG~~---~~~~~~~~l~~~L~~-~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~ 106 (308)
||++||=+ ++......++..+.+ .|+.|+.++++.. +...+...++|+.++++.+.
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~--------------------p~~~~p~~~~D~~~a~~~l~ 60 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLA--------------------PEAPFPAALEDVKAAYRWLL 60 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---T--------------------TTSSTTHHHHHHHHHHHHHH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccc--------------------ccccccccccccccceeeec
Confidence 78999955 345556677777765 8999988765422 11223345788898999888
Q ss_pred Hh-----CCCCeEEEEEEChHHHHHHHHHHHhC---CCCccEEEEecCCC
Q 021730 107 EF-----TPGGKLSLIGHSAGGWLARVYMEEFG---SSDISLLLTLGTPH 148 (308)
Q Consensus 107 ~~-----~~~~~v~lvGHSmGG~va~~~~~~~~---~~~v~~lv~lgtP~ 148 (308)
++ ...++|+|+|+|.||.++..++.... ...+++++++.+..
T Consensus 61 ~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 61 KNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp HTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred cccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 76 45679999999999999999887532 23588999887643
No 111
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.35 E-value=3.8e-06 Score=72.88 Aligned_cols=104 Identities=13% Similarity=0.143 Sum_probs=74.3
Q ss_pred CCCCCcEEEeCCCCCCchhHHHHHHHHHh-CCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHH
Q 021730 25 HFQCRPAVILPGLGNNSGDYQRLQLTLKD-YGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQ 103 (308)
Q Consensus 25 ~~~~~pvvlvHG~~~~~~~~~~l~~~L~~-~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 103 (308)
......+++.||...+...+..+...|.. -++.++..|++.++.. .| . +......+|++++.+
T Consensus 57 ~~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S---~G--~-----------psE~n~y~Di~avye 120 (258)
T KOG1552|consen 57 EAAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRS---SG--K-----------PSERNLYADIKAVYE 120 (258)
T ss_pred cccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEeccccccc---CC--C-----------cccccchhhHHHHHH
Confidence 34567899999997777766566666655 3667777555444321 11 1 112234589999999
Q ss_pred HHHHhC-CCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 104 KAKEFT-PGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 104 ~l~~~~-~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
.++..+ +.++|+|+|||||...+..++.+.+ +.++|+. +||
T Consensus 121 ~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~---~~alVL~-SPf 162 (258)
T KOG1552|consen 121 WLRNRYGSPERIILYGQSIGTVPTVDLASRYP---LAAVVLH-SPF 162 (258)
T ss_pred HHHhhcCCCceEEEEEecCCchhhhhHhhcCC---cceEEEe-ccc
Confidence 999888 4799999999999999999998754 7888876 667
No 112
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.34 E-value=1.5e-06 Score=62.65 Aligned_cols=64 Identities=22% Similarity=0.309 Sum_probs=47.6
Q ss_pred CCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAI 102 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i 102 (308)
.+..|+++||++.+...|..+++.|.++||.|+. +|++|.+.+. +.....+.++.+++|+...+
T Consensus 15 ~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~-----~D~rGhG~S~-------g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 15 PKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFA-----YDHRGHGRSE-------GKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEE-----ECCCcCCCCC-------CcccccCCHHHHHHHHHHHh
Confidence 6888999999999999999999999999999998 5566543221 11112355777777777654
No 113
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.25 E-value=3.6e-06 Score=71.70 Aligned_cols=109 Identities=20% Similarity=0.276 Sum_probs=76.6
Q ss_pred CCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKA 105 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 105 (308)
....-++.-.+++-....|+.++..+.+.||.|.. +|++|.+.+. .....+ ......|+-..|+..+|+.+
T Consensus 28 ~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt-----~dyRG~g~S~--p~~~~~--~~~~~~DwA~~D~~aal~~~ 98 (281)
T COG4757 28 KASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLT-----FDYRGIGQSR--PASLSG--SQWRYLDWARLDFPAALAAL 98 (281)
T ss_pred CCCCcEEecccCCcchhHhHHHHHHhhccCceEEE-----EecccccCCC--cccccc--CccchhhhhhcchHHHHHHH
Confidence 34445777788888889999999999999999998 5566543221 111111 12245777788999999999
Q ss_pred HHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 106 KEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 106 ~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
++..+..+..+|||||||.+.-.+.. ++ +.......|+
T Consensus 99 ~~~~~~~P~y~vgHS~GGqa~gL~~~-~~--k~~a~~vfG~ 136 (281)
T COG4757 99 KKALPGHPLYFVGHSFGGQALGLLGQ-HP--KYAAFAVFGS 136 (281)
T ss_pred HhhCCCCceEEeeccccceeeccccc-Cc--ccceeeEecc
Confidence 98888899999999999997766432 22 4444444443
No 114
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.22 E-value=2.4e-06 Score=73.65 Aligned_cols=115 Identities=16% Similarity=0.174 Sum_probs=71.6
Q ss_pred CCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCC--CCCcHHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLR--PRPVLDWYFSRMNDAIQ 103 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~l~~~i~ 103 (308)
++++.||++|++.+-......+++.|.+.||.|++.|+ ++..+.... +......... .....+...+++..+++
T Consensus 12 ~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~--f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~aa~~ 87 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDL--FGGRGAPPS--DPEEAFAAMRELFAPRPEQVAADLQAAVD 87 (218)
T ss_dssp SSEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-C--CCCTS--CC--CHHCHHHHHHHCHHHSHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEeccc--ccCCCCCcc--chhhHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 56788999999999888888999999999999998763 221110000 0100000000 00012334567777788
Q ss_pred HHHHhC--CCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 104 KAKEFT--PGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 104 ~l~~~~--~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
.+..+. ..++|.++|+|+||.++..++.+. ..++..|..-+
T Consensus 88 ~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~--~~~~a~v~~yg 130 (218)
T PF01738_consen 88 YLRAQPEVDPGKIGVVGFCWGGKLALLLAARD--PRVDAAVSFYG 130 (218)
T ss_dssp HHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT--TTSSEEEEES-
T ss_pred HHHhccccCCCcEEEEEEecchHHhhhhhhhc--cccceEEEEcC
Confidence 877654 347999999999999999977653 36888887643
No 115
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.22 E-value=1.1e-05 Score=87.10 Aligned_cols=102 Identities=18% Similarity=0.128 Sum_probs=71.8
Q ss_pred CCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKA 105 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 105 (308)
+.++|++++||++++...|..+++.|.+. +.|+.++.+..+.. ......++.+.+++.+.++.+
T Consensus 1066 ~~~~~l~~lh~~~g~~~~~~~l~~~l~~~-~~v~~~~~~g~~~~---------------~~~~~~l~~la~~~~~~i~~~ 1129 (1296)
T PRK10252 1066 GDGPTLFCFHPASGFAWQFSVLSRYLDPQ-WSIYGIQSPRPDGP---------------MQTATSLDEVCEAHLATLLEQ 1129 (1296)
T ss_pred CCCCCeEEecCCCCchHHHHHHHHhcCCC-CcEEEEECCCCCCC---------------CCCCCCHHHHHHHHHHHHHhh
Confidence 34578999999999999999999999654 88888665433210 001123555555555444443
Q ss_pred HHhCCCCeEEEEEEChHHHHHHHHHHHh--CCCCccEEEEecC
Q 021730 106 KEFTPGGKLSLIGHSAGGWLARVYMEEF--GSSDISLLLTLGT 146 (308)
Q Consensus 106 ~~~~~~~~v~lvGHSmGG~va~~~~~~~--~~~~v~~lv~lgt 146 (308)
.+..+++++||||||.++..++.+. ...++..++++++
T Consensus 1130 ---~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1130 ---QPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred ---CCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 3456899999999999999988753 2347899998875
No 116
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.17 E-value=5.3e-06 Score=72.02 Aligned_cols=115 Identities=18% Similarity=0.171 Sum_probs=71.3
Q ss_pred CCCCCCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHH
Q 021730 22 ATSHFQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDA 101 (308)
Q Consensus 22 ~~~~~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~ 101 (308)
....+.-+.|+|+||+......|..+.+++..+||-|+..++...-+ .+ + ..........++++.+-
T Consensus 40 P~~~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~---------p~---~-~~Ei~~aa~V~~WL~~g 106 (307)
T PF07224_consen 40 PSEAGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFP---------PD---G-QDEIKSAASVINWLPEG 106 (307)
T ss_pred CCcCCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccC---------CC---c-hHHHHHHHHHHHHHHhh
Confidence 34445667788889999999999999999999999888744321110 00 0 00001111222333333
Q ss_pred HHHHHHh---CCCCeEEEEEEChHHHHHHHHHHHhC-CCCccEEEEecCCCCC
Q 021730 102 IQKAKEF---TPGGKLSLIGHSAGGWLARVYMEEFG-SSDISLLLTLGTPHLP 150 (308)
Q Consensus 102 i~~l~~~---~~~~~v~lvGHSmGG~va~~~~~~~~-~~~v~~lv~lgtP~~~ 150 (308)
+..++.. -...++.++|||.||-.+..++..+. .-++..||.|. |..+
T Consensus 107 L~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiD-PV~G 158 (307)
T PF07224_consen 107 LQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGID-PVAG 158 (307)
T ss_pred hhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheeccc-ccCC
Confidence 3333211 12478999999999999999888763 33577888775 4443
No 117
>COG0400 Predicted esterase [General function prediction only]
Probab=98.17 E-value=1.3e-05 Score=68.59 Aligned_cols=112 Identities=17% Similarity=0.129 Sum_probs=69.3
Q ss_pred CCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEE--eecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVA--EVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQK 104 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~--~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 104 (308)
..+.||++||+|++..++.++.+.+.-+ +.++.+ ++..++-.. +-.-+..+.+. ....+...+.+.+.|+.
T Consensus 17 ~~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~-----~f~~~~~~~~d-~edl~~~~~~~~~~l~~ 89 (207)
T COG0400 17 AAPLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPR-----FFRRYDEGSFD-QEDLDLETEKLAEFLEE 89 (207)
T ss_pred CCcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCccc-----ceeecCCCccc-hhhHHHHHHHHHHHHHH
Confidence 3446999999999999999865555433 333321 111111000 00000001111 12233345677778888
Q ss_pred HHHhCCC--CeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 105 AKEFTPG--GKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 105 l~~~~~~--~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
+.++++. ++++++|+|.|+.+++..+..++. .++++|++++
T Consensus 90 ~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~-~~~~ail~~g 132 (207)
T COG0400 90 LAEEYGIDSSRIILIGFSQGANIALSLGLTLPG-LFAGAILFSG 132 (207)
T ss_pred HHHHhCCChhheEEEecChHHHHHHHHHHhCch-hhccchhcCC
Confidence 8777766 899999999999999999988765 6888887754
No 118
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.17 E-value=1.2e-05 Score=69.28 Aligned_cols=105 Identities=11% Similarity=0.048 Sum_probs=66.7
Q ss_pred CCCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHH
Q 021730 25 HFQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQK 104 (308)
Q Consensus 25 ~~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 104 (308)
+..+.-++.+|=-|+++..|..+.+.|... ..++.+.++..+-+ .......+++.+++.+...+..
T Consensus 4 ~~~~~~L~cfP~AGGsa~~fr~W~~~lp~~-iel~avqlPGR~~r-------------~~ep~~~di~~Lad~la~el~~ 69 (244)
T COG3208 4 PGARLRLFCFPHAGGSASLFRSWSRRLPAD-IELLAVQLPGRGDR-------------FGEPLLTDIESLADELANELLP 69 (244)
T ss_pred CCCCceEEEecCCCCCHHHHHHHHhhCCch-hheeeecCCCcccc-------------cCCcccccHHHHHHHHHHHhcc
Confidence 345667888899999999999999988774 66666654433211 0011112333333333333331
Q ss_pred HHHhCCCCeEEEEEEChHHHHHHHHHHHhCC--CCccEEEEecC
Q 021730 105 AKEFTPGGKLSLIGHSAGGWLARVYMEEFGS--SDISLLLTLGT 146 (308)
Q Consensus 105 l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~--~~v~~lv~lgt 146 (308)
....+++.++||||||+++.+.+.+... ..+..+...|.
T Consensus 70 ---~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~ 110 (244)
T COG3208 70 ---PLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGC 110 (244)
T ss_pred ---ccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecC
Confidence 2456799999999999999998876422 12667776664
No 119
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.09 E-value=3.2e-05 Score=64.27 Aligned_cols=106 Identities=17% Similarity=0.118 Sum_probs=72.7
Q ss_pred CCCCCcEEEeCCCC---CCc--hhHHHHHHHHHhCCCcEEEEeeccccccc--ccCCCCCcccccccCCCCCcHHHHHHH
Q 021730 25 HFQCRPAVILPGLG---NNS--GDYQRLQLTLKDYGVPTVVAEVSRFDWLR--NAAGLVDPNYWRATLRPRPVLDWYFSR 97 (308)
Q Consensus 25 ~~~~~pvvlvHG~~---~~~--~~~~~l~~~L~~~G~~v~~~~~~~~d~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~ 97 (308)
+...+..|++|-.. ++. ..-+.++..|.++||.++.. ++++ .+.|.++.+. + + .+|
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRf-----NfRgVG~S~G~fD~Gi--G---------E-~~D 87 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRF-----NFRGVGRSQGEFDNGI--G---------E-LED 87 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEee-----cccccccccCcccCCc--c---------h-HHH
Confidence 34445555556533 333 33458899999999999984 4444 2334333221 1 1 478
Q ss_pred HHHHHHHHHHhCCCCeE-EEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCC
Q 021730 98 MNDAIQKAKEFTPGGKL-SLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHL 149 (308)
Q Consensus 98 l~~~i~~l~~~~~~~~v-~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~ 149 (308)
..++++.++.+++..+. .+.|+|.|++|+..++.+.++ ...++.+.+|.+
T Consensus 88 a~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e--~~~~is~~p~~~ 138 (210)
T COG2945 88 AAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE--ILVFISILPPIN 138 (210)
T ss_pred HHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc--ccceeeccCCCC
Confidence 99999999999988776 789999999999999987654 566777766664
No 120
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.09 E-value=4.4e-05 Score=66.88 Aligned_cols=112 Identities=11% Similarity=0.146 Sum_probs=74.9
Q ss_pred CcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcc-cccccCCCCCcHHHHHHHHHHHHHHHHH
Q 021730 29 RPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPN-YWRATLRPRPVLDWYFSRMNDAIQKAKE 107 (308)
Q Consensus 29 ~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~l~~~i~~l~~ 107 (308)
+.||++|+..+-......++++|.+.||.+++.++ +...+......+.. ......-.........+++..+++.+..
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~ 105 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDL--YGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLAR 105 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechh--hccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHh
Confidence 78889999999999999999999999999998663 11111110000000 0011000011124567889999998876
Q ss_pred hC--CCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEe
Q 021730 108 FT--PGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTL 144 (308)
Q Consensus 108 ~~--~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~l 144 (308)
+. ..++|.++|.||||.++..++.+.+ .|++.|..
T Consensus 106 ~~~~~~~~ig~~GfC~GG~~a~~~a~~~~--~v~a~v~f 142 (236)
T COG0412 106 QPQVDPKRIGVVGFCMGGGLALLAATRAP--EVKAAVAF 142 (236)
T ss_pred CCCCCCceEEEEEEcccHHHHHHhhcccC--CccEEEEe
Confidence 44 2468999999999999999988744 57776644
No 121
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.05 E-value=0.00015 Score=66.09 Aligned_cols=123 Identities=24% Similarity=0.245 Sum_probs=79.2
Q ss_pred CCCCCCcEEEeCCCCCCc---hhHHHHHHHHHhCCCcEEEEeecccccccc-----cCCCCCcccccccCCCC-------
Q 021730 24 SHFQCRPAVILPGLGNNS---GDYQRLQLTLKDYGVPTVVAEVSRFDWLRN-----AAGLVDPNYWRATLRPR------- 88 (308)
Q Consensus 24 ~~~~~~pvvlvHG~~~~~---~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~-----~~g~~~~~~~~~~~~~~------- 88 (308)
....+..||+|||.+.++ .....|.+.|.++|+.++.+.++...+... ......... .......
T Consensus 83 ~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~-~~~~~~~~~~~~~~ 161 (310)
T PF12048_consen 83 SAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAG-DQQLSQPSDEPSPA 161 (310)
T ss_pred CCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCC-CCCcCCCCCCCccc
Confidence 345677899999999876 456699999999999999887665333210 000000000 0000000
Q ss_pred ---------CcHHHHHHHHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 89 ---------PVLDWYFSRMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 89 ---------~~~~~~~~~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
......++.|...+..+.. .+..+++||||++|+..+..|+.+.+...++++|+|++..
T Consensus 162 ~~~~~~~~~~~~~~~~ari~Aa~~~~~~-~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~ 229 (310)
T PF12048_consen 162 SAQEAEAREAYEERLFARIEAAIAFAQQ-QGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYW 229 (310)
T ss_pred cccHhHHhHHHHHHHHHHHHHHHHHHHh-cCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCC
Confidence 1122334455555555443 5667799999999999999999987776799999997643
No 122
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.03 E-value=4.3e-05 Score=71.66 Aligned_cols=106 Identities=10% Similarity=0.088 Sum_probs=74.9
Q ss_pred CCcEEEeCCCCCCchhHH-HHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHH
Q 021730 28 CRPAVILPGLGNNSGDYQ-RLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAK 106 (308)
Q Consensus 28 ~~pvvlvHG~~~~~~~~~-~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~ 106 (308)
++||++|.-+.++..... ++++.|.+ |++|+.+ ||..-. ..+. ..+. -.++.|++.+.++|+.+
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~-----DW~~p~--~vp~--~~~~----f~ldDYi~~l~~~i~~~- 166 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYIT-----DWVNAR--MVPL--SAGK----FDLEDYIDYLIEFIRFL- 166 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEE-----eCCCCC--CCch--hcCC----CCHHHHHHHHHHHHHHh-
Confidence 479999999998776654 79999999 9999985 565310 0000 0111 24677777777777555
Q ss_pred HhCCCCeEEEEEEChHHHHHHHHHHHhC----CCCccEEEEecCCCCCCC
Q 021730 107 EFTPGGKLSLIGHSAGGWLARVYMEEFG----SSDISLLLTLGTPHLPPP 152 (308)
Q Consensus 107 ~~~~~~~v~lvGHSmGG~va~~~~~~~~----~~~v~~lv~lgtP~~~~~ 152 (308)
+ .+++++|.||||..++.+++-.. +.++++++++++|.....
T Consensus 167 ---G-~~v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 167 ---G-PDIHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred ---C-CCCcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC
Confidence 3 34999999999999887776431 236999999999997654
No 123
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.00 E-value=0.00011 Score=63.37 Aligned_cols=114 Identities=18% Similarity=0.113 Sum_probs=64.5
Q ss_pred CCCCcEEEeCCCCCCchhHHHH--HHHHH-hCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRL--QLTLK-DYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAI 102 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l--~~~L~-~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i 102 (308)
++.+.||++||.+.+...|... .+.|. ++||-|+..+-....... + ..+ |...... ...++ ...|.+.|
T Consensus 14 ~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~---~--cw~-w~~~~~~-~g~~d-~~~i~~lv 85 (220)
T PF10503_consen 14 GPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQ---G--CWN-WFSDDQQ-RGGGD-VAFIAALV 85 (220)
T ss_pred CCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCC---C--ccc-ccccccc-cCccc-hhhHHHHH
Confidence 3557788889999998877642 22344 456655432211000000 0 000 0000000 00111 23466667
Q ss_pred HHHHHhCCC--CeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 103 QKAKEFTPG--GKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 103 ~~l~~~~~~--~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
+++..+++. .+|.+.|+|.||.++..++..+|+ .+.++...+.+.
T Consensus 86 ~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd-~faa~a~~sG~~ 132 (220)
T PF10503_consen 86 DYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPD-LFAAVAVVSGVP 132 (220)
T ss_pred HhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCc-cceEEEeecccc
Confidence 777766654 699999999999999999998876 677666554433
No 124
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=97.96 E-value=1.5e-05 Score=74.63 Aligned_cols=116 Identities=18% Similarity=0.165 Sum_probs=58.3
Q ss_pred CCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCC--C--Ccc----------ccc---ccCCCC
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGL--V--DPN----------YWR---ATLRPR 88 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~--~--~~~----------~~~---~~~~~~ 88 (308)
+.-|.|||-||++++...|..++..|+.+||-|+.++ |+..+... . +.. +.. -.+...
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aie-----HrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIE-----HRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDF 172 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE--------SS-SSEEEE-SSHHHHHHT---------EEEE----
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEec-----cCCCceeEEEeccCCCccccccccccccccceeccccc
Confidence 3445666679999999999999999999999888754 33211000 0 000 000 000000
Q ss_pred ---CcH-------HHHHHHHHHHHHHHHHh----------------------CCCCeEEEEEEChHHHHHHHHHHHhCCC
Q 021730 89 ---PVL-------DWYFSRMNDAIQKAKEF----------------------TPGGKLSLIGHSAGGWLARVYMEEFGSS 136 (308)
Q Consensus 89 ---~~~-------~~~~~~l~~~i~~l~~~----------------------~~~~~v~lvGHSmGG~va~~~~~~~~~~ 136 (308)
... +...+++..+++.+.+. ...++|.++|||+||..+...+.+. .
T Consensus 173 ~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d--~ 250 (379)
T PF03403_consen 173 DPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD--T 250 (379)
T ss_dssp -GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH---T
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc--c
Confidence 001 11123344444444310 0125799999999999999877763 4
Q ss_pred CccEEEEecCCC
Q 021730 137 DISLLLTLGTPH 148 (308)
Q Consensus 137 ~v~~lv~lgtP~ 148 (308)
+++..|.+.+-.
T Consensus 251 r~~~~I~LD~W~ 262 (379)
T PF03403_consen 251 RFKAGILLDPWM 262 (379)
T ss_dssp T--EEEEES---
T ss_pred CcceEEEeCCcc
Confidence 799999998643
No 125
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=97.94 E-value=3.7e-05 Score=70.12 Aligned_cols=56 Identities=18% Similarity=0.169 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHhCCCCeEE-EEEEChHHHHHHHHHHHhCCCCccEEEEecCCCCCC
Q 021730 95 FSRMNDAIQKAKEFTPGGKLS-LIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHLPP 151 (308)
Q Consensus 95 ~~~l~~~i~~l~~~~~~~~v~-lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~~~ 151 (308)
++|+.++-+.+.+..+.+++. +||-||||+.++.++..||+ +|+++|.|+++...+
T Consensus 129 i~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd-~V~~~i~ia~~~r~s 185 (368)
T COG2021 129 IRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPD-RVRRAIPIATAARLS 185 (368)
T ss_pred HHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChH-HHhhhheecccccCC
Confidence 455555557777778888887 99999999999999999876 799999998866544
No 126
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.92 E-value=5.3e-05 Score=61.60 Aligned_cols=58 Identities=22% Similarity=0.290 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCC---CCccEEEEecCCCCCC
Q 021730 94 YFSRMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGS---SDISLLLTLGTPHLPP 151 (308)
Q Consensus 94 ~~~~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~---~~v~~lv~lgtP~~~~ 151 (308)
..+.+...+++...+++..+++++||||||.++..++..... .++..++++++|..+.
T Consensus 10 ~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~ 70 (153)
T cd00741 10 LANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGN 70 (153)
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccc
Confidence 445666666766666788999999999999999998876543 3577899999988554
No 127
>PRK04940 hypothetical protein; Provisional
Probab=97.87 E-value=0.00015 Score=60.34 Aligned_cols=49 Identities=12% Similarity=0.156 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 96 SRMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 96 ~~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
+.+.+.|+++......+++.|||+||||.-|..++.+++- + .|+|.+-.
T Consensus 44 ~~l~~~i~~~~~~~~~~~~~liGSSLGGyyA~~La~~~g~---~-aVLiNPAv 92 (180)
T PRK04940 44 QHLLKEVDKMLQLSDDERPLICGVGLGGYWAERIGFLCGI---R-QVIFNPNL 92 (180)
T ss_pred HHHHHHHHHhhhccCCCCcEEEEeChHHHHHHHHHHHHCC---C-EEEECCCC
Confidence 4455555443321112579999999999999999998753 3 45665533
No 128
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=97.78 E-value=0.00017 Score=65.70 Aligned_cols=102 Identities=13% Similarity=0.050 Sum_probs=64.8
Q ss_pred CCCCCcEEEeCCCC---CCchhHH-HHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHH
Q 021730 25 HFQCRPAVILPGLG---NNSGDYQ-RLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMND 100 (308)
Q Consensus 25 ~~~~~pvvlvHG~~---~~~~~~~-~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (308)
....+.||++||-+ ++....+ .+...+...|+.|+.++++..- ...+...+++..+
T Consensus 76 ~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaP--------------------e~~~p~~~~d~~~ 135 (312)
T COG0657 76 AATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAP--------------------EHPFPAALEDAYA 135 (312)
T ss_pred CCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCC--------------------CCCCCchHHHHHH
Confidence 34578899999955 4555664 4555556689999987644321 0011123456666
Q ss_pred HHHHHHHhC-----CCCeEEEEEEChHHHHHHHHHHHhCC---CCccEEEEecC
Q 021730 101 AIQKAKEFT-----PGGKLSLIGHSAGGWLARVYMEEFGS---SDISLLLTLGT 146 (308)
Q Consensus 101 ~i~~l~~~~-----~~~~v~lvGHSmGG~va~~~~~~~~~---~~v~~lv~lgt 146 (308)
++..+.++. ..++|.+.|+|.||.++..++..... ......+++.+
T Consensus 136 a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P 189 (312)
T COG0657 136 AYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISP 189 (312)
T ss_pred HHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEec
Confidence 666666442 25789999999999999988775332 23566666643
No 129
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=97.62 E-value=0.00022 Score=66.60 Aligned_cols=107 Identities=16% Similarity=0.174 Sum_probs=60.5
Q ss_pred CCCCcEEEeCCCCCCchhHHHHH-HHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQ-LTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQK 104 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~-~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 104 (308)
++.|.||++.|+-+-..++..+. ++|..+|+.++.+|.+..+... .+. ++ ++.+.+ ...+++.
T Consensus 188 ~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~---------~~~--l~--~D~~~l---~~aVLd~ 251 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESP---------KWP--LT--QDSSRL---HQAVLDY 251 (411)
T ss_dssp S-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGT---------TT---S---S-CCHH---HHHHHHH
T ss_pred CCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccc---------cCC--CC--cCHHHH---HHHHHHH
Confidence 34455555677777777776654 6799999999998877665321 000 11 122222 2344444
Q ss_pred HHHhC--CCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCC
Q 021730 105 AKEFT--PGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHL 149 (308)
Q Consensus 105 l~~~~--~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~ 149 (308)
+...- ...+|.++|-||||.++..++.-.. .|++++|++|+|.+
T Consensus 252 L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~-~RlkavV~~Ga~vh 297 (411)
T PF06500_consen 252 LASRPWVDHTRVGAWGFSFGGYYAVRLAALED-PRLKAVVALGAPVH 297 (411)
T ss_dssp HHHSTTEEEEEEEEEEETHHHHHHHHHHHHTT-TT-SEEEEES---S
T ss_pred HhcCCccChhheEEEEeccchHHHHHHHHhcc-cceeeEeeeCchHh
Confidence 44321 2369999999999999988765433 48999999999864
No 130
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=97.62 E-value=0.00018 Score=65.87 Aligned_cols=100 Identities=18% Similarity=0.224 Sum_probs=61.1
Q ss_pred CCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCccccc-ccCCCCCcHHHHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWR-ATLRPRPVLDWYFSRMNDAIQKA 105 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~l~~~i~~l 105 (308)
..+.|||-||.++....|..+++.|.+.||-|.. .+|.+...+.....+.. ....+....+ .-.++...|..+
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~-----~~hpgs~~~~~~~~~~~~~~~~p~~~~e-rp~dis~lLd~L 143 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAA-----PDHPGSNAGGAPAAYAGPGSYAPAEWWE-RPLDISALLDAL 143 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEe-----ccCCCcccccCChhhcCCcccchhhhhc-ccccHHHHHHHH
Confidence 4455556699999999999999999999998776 34444322222222211 0000001111 123444444444
Q ss_pred HHh---------CCCCeEEEEEEChHHHHHHHHHHH
Q 021730 106 KEF---------TPGGKLSLIGHSAGGWLARVYMEE 132 (308)
Q Consensus 106 ~~~---------~~~~~v~lvGHSmGG~va~~~~~~ 132 (308)
.+. ....+|.++|||+||..++..+..
T Consensus 144 ~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA 179 (365)
T COG4188 144 LQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGA 179 (365)
T ss_pred HHhhcCcccccccCccceEEEecccccHHHHHhccc
Confidence 433 234689999999999999987764
No 131
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=97.60 E-value=0.00066 Score=58.68 Aligned_cols=106 Identities=14% Similarity=0.178 Sum_probs=62.4
Q ss_pred CCCCCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHH
Q 021730 23 TSHFQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAI 102 (308)
Q Consensus 23 ~~~~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i 102 (308)
.....+++||+.+||+..+..|..++.+|...||.|+..| ...|.|-+.|.... -.+..-.++|..++
T Consensus 25 ~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyD--sl~HvGlSsG~I~e----------ftms~g~~sL~~V~ 92 (294)
T PF02273_consen 25 NEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYD--SLNHVGLSSGDINE----------FTMSIGKASLLTVI 92 (294)
T ss_dssp TS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE-----B-----------------------HHHHHHHHHHHH
T ss_pred CCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEecc--ccccccCCCCChhh----------cchHHhHHHHHHHH
Confidence 3344557888889999999999999999999999999855 22455543332110 11333356788888
Q ss_pred HHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEe
Q 021730 103 QKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTL 144 (308)
Q Consensus 103 ~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~l 144 (308)
+.+. ..+.+++-||.-|+.|-+|...+.+- .+.-+|+.
T Consensus 93 dwl~-~~g~~~~GLIAaSLSaRIAy~Va~~i---~lsfLita 130 (294)
T PF02273_consen 93 DWLA-TRGIRRIGLIAASLSARIAYEVAADI---NLSFLITA 130 (294)
T ss_dssp HHHH-HTT---EEEEEETTHHHHHHHHTTTS-----SEEEEE
T ss_pred HHHH-hcCCCcchhhhhhhhHHHHHHHhhcc---CcceEEEE
Confidence 8887 57788999999999999999987642 46666654
No 132
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.59 E-value=0.00027 Score=56.24 Aligned_cols=57 Identities=26% Similarity=0.421 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhC---C--CCccEEEEecCCCCC
Q 021730 94 YFSRMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFG---S--SDISLLLTLGTPHLP 150 (308)
Q Consensus 94 ~~~~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~---~--~~v~~lv~lgtP~~~ 150 (308)
..+.+.+.++++.++++..++++.|||+||.+|..++.... . ...-.+++.|+|-.+
T Consensus 46 ~~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~~ 107 (140)
T PF01764_consen 46 LYDQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRVG 107 (140)
T ss_dssp HHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--B
T ss_pred HHHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCcccc
Confidence 34567777777777788889999999999999988777531 1 133467778888743
No 133
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.54 E-value=0.0011 Score=56.05 Aligned_cols=137 Identities=13% Similarity=0.104 Sum_probs=76.6
Q ss_pred CCCCCcEEEeCCCCC-CchhHH---------------HHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCC
Q 021730 25 HFQCRPAVILPGLGN-NSGDYQ---------------RLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPR 88 (308)
Q Consensus 25 ~~~~~pvvlvHG~~~-~~~~~~---------------~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~ 88 (308)
+.++..+|||||.|- ....|. +.+++..+.||.|++.+-++--.+. ...+. +.
T Consensus 98 t~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfy--------e~k~n---p~ 166 (297)
T KOG3967|consen 98 TNPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFY--------EKKRN---PQ 166 (297)
T ss_pred cCccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhh--------hcccC---cc
Confidence 456668999999884 234443 5677778889999886543211000 00000 00
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCC-CCccEEEEecCCCCCCCCCcchhhhhhhhHHH
Q 021730 89 PVLDWYFSRMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGS-SDISLLLTLGTPHLPPPKGLPWVIDQTRGLLN 167 (308)
Q Consensus 89 ~~~~~~~~~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~-~~v~~lv~lgtP~~~~~~g~~~~~~~~~~~~~ 167 (308)
.....-++....+-..+......+.+.+|.||.||.....++.+.+. .+|.++.+-.+|+-....+....+. ....+
T Consensus 167 kyirt~veh~~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~p~a~~~e~~~--~n~c~ 244 (297)
T KOG3967|consen 167 KYIRTPVEHAKYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGSPQAKNKEYLC--DNACD 244 (297)
T ss_pred hhccchHHHHHHHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccCchhcCccHHH--HHHhh
Confidence 00111123333333333333445899999999999999999998766 4577777777775333322111111 13445
Q ss_pred HHHHhcc
Q 021730 168 YVEKQCS 174 (308)
Q Consensus 168 ~~~~~~p 174 (308)
|+..+.|
T Consensus 245 wvasntP 251 (297)
T KOG3967|consen 245 WVASNTP 251 (297)
T ss_pred hhhcCCC
Confidence 6555555
No 134
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.50 E-value=0.0016 Score=54.30 Aligned_cols=57 Identities=18% Similarity=0.376 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHhC-CCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCCCCC
Q 021730 95 FSRMNDAIQKAKEFT-PGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHLPPP 152 (308)
Q Consensus 95 ~~~l~~~i~~l~~~~-~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~~~~ 152 (308)
..+|.+.++.+.... +..++.+||||.|+.++-..+.. ....+..+|++|+|-.+..
T Consensus 91 a~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~-~~~~vddvv~~GSPG~g~~ 148 (177)
T PF06259_consen 91 APRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQ-GGLRVDDVVLVGSPGMGVD 148 (177)
T ss_pred HHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhh-CCCCcccEEEECCCCCCCC
Confidence 467888888887666 66799999999999999997776 3447999999999985543
No 135
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.48 E-value=0.008 Score=55.61 Aligned_cols=86 Identities=20% Similarity=0.173 Sum_probs=63.3
Q ss_pred CCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAK 106 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~ 106 (308)
...--||+-|=++...-=..+.++|+++|+.|+-+|--||-|-. ..-++..+|+.+.|+...
T Consensus 259 sd~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~------------------rtPe~~a~Dl~r~i~~y~ 320 (456)
T COG3946 259 SDTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSE------------------RTPEQIAADLSRLIRFYA 320 (456)
T ss_pred cceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhcc------------------CCHHHHHHHHHHHHHHHH
Confidence 33445555665555555558999999999999987755554432 234456789999999998
Q ss_pred HhCCCCeEEEEEEChHHHHHHHHH
Q 021730 107 EFTPGGKLSLIGHSAGGWLARVYM 130 (308)
Q Consensus 107 ~~~~~~~v~lvGHSmGG~va~~~~ 130 (308)
.+.+..++.|||+|+|.=+.-...
T Consensus 321 ~~w~~~~~~liGySfGADvlP~~~ 344 (456)
T COG3946 321 RRWGAKRVLLIGYSFGADVLPFAY 344 (456)
T ss_pred HhhCcceEEEEeecccchhhHHHH
Confidence 889999999999999997655433
No 136
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.46 E-value=9.5e-05 Score=68.13 Aligned_cols=116 Identities=18% Similarity=0.172 Sum_probs=64.6
Q ss_pred CCCCCCCCcEEEeCCCCC-CchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHH
Q 021730 22 ATSHFQCRPAVILPGLGN-NSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMND 100 (308)
Q Consensus 22 ~~~~~~~~pvvlvHG~~~-~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (308)
...++++.-||++||+.+ +..+|...+....+.--....+. .+..+.....+ ...+.+.+.+.+
T Consensus 74 ~~~~k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~---~g~~~~~~~T~------------~Gv~~lG~Rla~ 138 (405)
T KOG4372|consen 74 SFPTKPKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVV---RGKMNNMCQTF------------DGVDVLGERLAE 138 (405)
T ss_pred ccccCCceEEEeccccccccHHHHHHHHHhhhcCCCcceEee---eccccchhhcc------------ccceeeecccHH
Confidence 344567789999999998 56667666666665422211111 12222111100 111222233444
Q ss_pred HHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHh----CC--CC--ccEEEEecCCCCCCC
Q 021730 101 AIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEF----GS--SD--ISLLLTLGTPHLPPP 152 (308)
Q Consensus 101 ~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~----~~--~~--v~~lv~lgtP~~~~~ 152 (308)
.+.+.......+++.+||||+||++++.++... +. .. +...+++++|+.+..
T Consensus 139 ~~~e~~~~~si~kISfvghSLGGLvar~AIgyly~~~~~~f~~v~p~~fitlasp~~gIa 198 (405)
T KOG4372|consen 139 EVKETLYDYSIEKISFVGHSLGGLVARYAIGYLYEKAPDFFSDVEPVNFITLASPKLGIA 198 (405)
T ss_pred HHhhhhhccccceeeeeeeecCCeeeeEEEEeecccccccccccCcchhhhhcCCCcccc
Confidence 333333224468999999999999998866632 11 12 335677888886654
No 137
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=97.43 E-value=0.00045 Score=58.09 Aligned_cols=104 Identities=16% Similarity=0.115 Sum_probs=71.4
Q ss_pred CCCCCcEEEeCCCC---CCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHH
Q 021730 25 HFQCRPAVILPGLG---NNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDA 101 (308)
Q Consensus 25 ~~~~~pvvlvHG~~---~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~ 101 (308)
+...+..|||||-. ++...--..+.-+.++||.|..+. +++-. ....+.+.+.+...-
T Consensus 64 ~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvg---Y~l~~----------------q~htL~qt~~~~~~g 124 (270)
T KOG4627|consen 64 TNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVG---YNLCP----------------QVHTLEQTMTQFTHG 124 (270)
T ss_pred CCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEec---cCcCc----------------ccccHHHHHHHHHHH
Confidence 34556789999932 344444477778889999988764 22111 112355556666666
Q ss_pred HHHHHHhCCC-CeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCC
Q 021730 102 IQKAKEFTPG-GKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTP 147 (308)
Q Consensus 102 i~~l~~~~~~-~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP 147 (308)
+..+.+.++. +.+.+-|||.|+.++.....+...++|.++++++.-
T Consensus 125 v~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~Gv 171 (270)
T KOG4627|consen 125 VNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGV 171 (270)
T ss_pred HHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhH
Confidence 7777776665 567788999999999998887666789999887653
No 138
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.43 E-value=0.0014 Score=57.07 Aligned_cols=105 Identities=15% Similarity=0.097 Sum_probs=68.4
Q ss_pred CCCCcEEEeCCCCC---CchhHHHHHHHHHhCCCcEEEEeec-ccccccccCCCCCcccccccCCCCCcHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGN---NSGDYQRLQLTLKDYGVPTVVAEVS-RFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDA 101 (308)
Q Consensus 26 ~~~~pvvlvHG~~~---~~~~~~~l~~~L~~~G~~v~~~~~~-~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~ 101 (308)
.++..|-|+-|..- ..-.|..+.+.|.++||.|+..++. .+||. ...+...+..+.+
T Consensus 15 ~P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~tfDH~-------------------~~A~~~~~~f~~~ 75 (250)
T PF07082_consen 15 RPKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVTFDHQ-------------------AIAREVWERFERC 75 (250)
T ss_pred CCCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCCCcHH-------------------HHHHHHHHHHHHH
Confidence 35566777777442 3457899999999999999886642 23332 2233445566777
Q ss_pred HHHHHHhCCC----CeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCCC
Q 021730 102 IQKAKEFTPG----GKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHLP 150 (308)
Q Consensus 102 i~~l~~~~~~----~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~~ 150 (308)
++.+....+. -++.=||||||+.+-......+... -++-|+|+--+.+
T Consensus 76 ~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~-r~gniliSFNN~~ 127 (250)
T PF07082_consen 76 LRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVE-RAGNILISFNNFP 127 (250)
T ss_pred HHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhccCc-ccceEEEecCChH
Confidence 7776654321 3677899999999888765554443 3566777765533
No 139
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.40 E-value=0.0018 Score=54.36 Aligned_cols=95 Identities=21% Similarity=0.331 Sum_probs=58.6
Q ss_pred EeCCCC--CCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHhCC
Q 021730 33 ILPGLG--NNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEFTP 110 (308)
Q Consensus 33 lvHG~~--~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~~~ 110 (308)
++|..+ ++...|..+...|... +.++.++....+ . + .. .....+...+.+. +.+....+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~-~~v~~~~~~g~~--~---~--~~--------~~~~~~~~~~~~~---~~l~~~~~ 62 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGR-RDVSALPLPGFG--P---G--EP--------LPASADALVEAQA---EAVLRAAG 62 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCC-ccEEEecCCCCC--C---C--CC--------CCCCHHHHHHHHH---HHHHHhcC
Confidence 345544 6778899999999764 778776544332 0 0 00 0122333333333 33333345
Q ss_pred CCeEEEEEEChHHHHHHHHHHHhC--CCCccEEEEecC
Q 021730 111 GGKLSLIGHSAGGWLARVYMEEFG--SSDISLLLTLGT 146 (308)
Q Consensus 111 ~~~v~lvGHSmGG~va~~~~~~~~--~~~v~~lv~lgt 146 (308)
..+++++||||||.++...+.... ...+.+++++++
T Consensus 63 ~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~ 100 (212)
T smart00824 63 GRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDT 100 (212)
T ss_pred CCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEcc
Confidence 678999999999999988777532 236889988876
No 140
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=97.39 E-value=0.00043 Score=69.19 Aligned_cols=107 Identities=10% Similarity=0.050 Sum_probs=67.0
Q ss_pred CcEEEeCCCCCCc--hhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHH
Q 021730 29 RPAVILPGLGNNS--GDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAK 106 (308)
Q Consensus 29 ~pvvlvHG~~~~~--~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~ 106 (308)
|.||++||-.... ..|....+.|..+||.|+..+++..+=.| ..+...... .......+|+.+.++.+.
T Consensus 395 P~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG-------~~F~~~~~~--~~g~~~~~D~~~~~~~l~ 465 (620)
T COG1506 395 PLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYG-------REFADAIRG--DWGGVDLEDLIAAVDALV 465 (620)
T ss_pred CEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccH-------HHHHHhhhh--ccCCccHHHHHHHHHHHH
Confidence 6788999975443 45778999999999999986543221000 000000000 001112467777777443
Q ss_pred HhCCC---CeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCC
Q 021730 107 EFTPG---GKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTP 147 (308)
Q Consensus 107 ~~~~~---~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP 147 (308)
+.+. +++.+.|||.||.+++..+.+.+ .+++.+...++
T Consensus 466 -~~~~~d~~ri~i~G~SyGGymtl~~~~~~~--~f~a~~~~~~~ 506 (620)
T COG1506 466 -KLPLVDPERIGITGGSYGGYMTLLAATKTP--RFKAAVAVAGG 506 (620)
T ss_pred -hCCCcChHHeEEeccChHHHHHHHHHhcCc--hhheEEeccCc
Confidence 3442 58999999999999999888754 56777666543
No 141
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.37 E-value=0.00067 Score=58.96 Aligned_cols=59 Identities=22% Similarity=0.324 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCC---CCccEEEEecCCCCCC
Q 021730 93 WYFSRMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGS---SDISLLLTLGTPHLPP 151 (308)
Q Consensus 93 ~~~~~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~---~~v~~lv~lgtP~~~~ 151 (308)
...+++...+++++++++..++++.||||||.+|..++..... ...-.++++|+|--+.
T Consensus 109 ~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~vg~ 170 (229)
T cd00519 109 SLYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRVGN 170 (229)
T ss_pred HHHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCCCC
Confidence 3445666677777777888899999999999999887765321 1234577888888543
No 142
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.36 E-value=0.0021 Score=58.73 Aligned_cols=114 Identities=19% Similarity=0.191 Sum_probs=72.4
Q ss_pred CCCCCcEEEeCCCCCCchhHH-HH-HHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcH----HHHHHHH
Q 021730 25 HFQCRPAVILPGLGNNSGDYQ-RL-QLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVL----DWYFSRM 98 (308)
Q Consensus 25 ~~~~~pvvlvHG~~~~~~~~~-~l-~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~----~~~~~~l 98 (308)
...++.+|.++|.|.+..... .+ +..|.+.|+..+.+..+.|+.+. +....+..+....++ ...+.+.
T Consensus 89 ~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~Rk------P~~Q~~s~l~~VsDl~~~g~~~i~E~ 162 (348)
T PF09752_consen 89 SPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRK------PKDQRRSSLRNVSDLFVMGRATILES 162 (348)
T ss_pred cCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccC------hhHhhcccccchhHHHHHHhHHHHHH
Confidence 345777888899888654444 44 88899999998888777676654 111111111100110 1123444
Q ss_pred HHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 99 NDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 99 ~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
...+..+.++ +..++.+.|-||||.+|...+...+. .|..+-+++.
T Consensus 163 ~~Ll~Wl~~~-G~~~~g~~G~SmGG~~A~laa~~~p~-pv~~vp~ls~ 208 (348)
T PF09752_consen 163 RALLHWLERE-GYGPLGLTGISMGGHMAALAASNWPR-PVALVPCLSW 208 (348)
T ss_pred HHHHHHHHhc-CCCceEEEEechhHhhHHhhhhcCCC-ceeEEEeecc
Confidence 5555555565 77899999999999999998887665 4666656654
No 143
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=97.34 E-value=0.0019 Score=59.69 Aligned_cols=119 Identities=15% Similarity=0.128 Sum_probs=58.3
Q ss_pred CCCCCcEEEeCCCCCCchhH------------------HHHHHHHHhCCCcEEEEeecccccccccCCCCC---ccc--c
Q 021730 25 HFQCRPAVILPGLGNNSGDY------------------QRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVD---PNY--W 81 (308)
Q Consensus 25 ~~~~~pvvlvHG~~~~~~~~------------------~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~---~~~--~ 81 (308)
.++-|.||++||.+++.... ..++.+|.++||-|+.+|...++-++...+... +++ .
T Consensus 112 ~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~l 191 (390)
T PF12715_consen 112 KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQAL 191 (390)
T ss_dssp -S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHH
T ss_pred CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHH
Confidence 45667789999988754321 146888999999999998766665542111000 000 0
Q ss_pred ---cccCCCCCcHHHHHHHHHHHHHHHHHhC--CCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 82 ---RATLRPRPVLDWYFSRMNDAIQKAKEFT--PGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 82 ---~~~~~~~~~~~~~~~~l~~~i~~l~~~~--~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
.-.++ ........-+...+++.+...- ..++|.++|+||||..+..+++- .++|+..|..+.
T Consensus 192 a~~~l~lG-~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaAL--DdRIka~v~~~~ 258 (390)
T PF12715_consen 192 ARNLLMLG-RSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAAL--DDRIKATVANGY 258 (390)
T ss_dssp HHHHHHTT---HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH---TT--EEEEES-
T ss_pred HHHHHHcC-cCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHc--chhhHhHhhhhh
Confidence 00000 0000000112223455554322 23799999999999998887664 348988887654
No 144
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=97.34 E-value=0.0045 Score=56.72 Aligned_cols=122 Identities=16% Similarity=0.106 Sum_probs=65.7
Q ss_pred CCCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeeccccccccc----CCCCCcccccccCCC---CCcHHHHHHH
Q 021730 25 HFQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNA----AGLVDPNYWRATLRP---RPVLDWYFSR 97 (308)
Q Consensus 25 ~~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~----~g~~~~~~~~~~~~~---~~~~~~~~~~ 97 (308)
.+..+.||.+||+++....+..... +...||.|+.+++...+-.... .+.....+....+.. ...+...+.|
T Consensus 80 ~~~~Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D 158 (320)
T PF05448_consen 80 KGKLPAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLD 158 (320)
T ss_dssp SSSEEEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHH
T ss_pred CCCcCEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHH
Confidence 3455667788999999888877654 6688999998876544311100 000000111111111 1123333456
Q ss_pred HHHHHHHHHHhC--CCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCCC
Q 021730 98 MNDAIQKAKEFT--PGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHLP 150 (308)
Q Consensus 98 l~~~i~~l~~~~--~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~~ 150 (308)
.-.+++.+...- ..++|.+.|.|+||.++...+.-. ++|++++.. .|+..
T Consensus 159 ~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd--~rv~~~~~~-vP~l~ 210 (320)
T PF05448_consen 159 AVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALD--PRVKAAAAD-VPFLC 210 (320)
T ss_dssp HHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHS--ST-SEEEEE-SESSS
T ss_pred HHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhC--ccccEEEec-CCCcc
Confidence 666677666432 247999999999999999987753 379888755 46643
No 145
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.27 E-value=0.006 Score=58.21 Aligned_cols=106 Identities=21% Similarity=0.216 Sum_probs=71.7
Q ss_pred CCCCCcEEEe-----CCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHH
Q 021730 25 HFQCRPAVIL-----PGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMN 99 (308)
Q Consensus 25 ~~~~~pvvlv-----HG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~ 99 (308)
...|+|+|+| ||-+-....-++-+-..-+.|+.|+-+.....- .+...+.......+
T Consensus 65 d~~krP~vViDPRAGHGpGIGGFK~dSevG~AL~~GHPvYFV~F~p~P------------------~pgQTl~DV~~ae~ 126 (581)
T PF11339_consen 65 DPTKRPFVVIDPRAGHGPGIGGFKPDSEVGVALRAGHPVYFVGFFPEP------------------EPGQTLEDVMRAEA 126 (581)
T ss_pred CCCCCCeEEeCCCCCCCCCccCCCcccHHHHHHHcCCCeEEEEecCCC------------------CCCCcHHHHHHHHH
Confidence 3567889888 443322222244344344558999865321110 01133555566677
Q ss_pred HHHHHHHHhCCCC-eEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCC
Q 021730 100 DAIQKAKEFTPGG-KLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHL 149 (308)
Q Consensus 100 ~~i~~l~~~~~~~-~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~ 149 (308)
..++++.+.++.. +.++||.+.|||.+..+++.++. .+.-+|+-|+|..
T Consensus 127 ~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd-~~gplvlaGaPls 176 (581)
T PF11339_consen 127 AFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPD-LVGPLVLAGAPLS 176 (581)
T ss_pred HHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcC-ccCceeecCCCcc
Confidence 8888888888754 99999999999999999998776 7999999999874
No 146
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.21 E-value=0.0022 Score=54.62 Aligned_cols=103 Identities=16% Similarity=0.146 Sum_probs=68.5
Q ss_pred CCCcEEEeCCCCCCc---hhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNS---GDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQ 103 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~---~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 103 (308)
.+.-||||-|++... ..-..|+..|-+.++..+.+-... .+.| | +. ..++.-.++|+..++
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~S-sy~G----------~-Gt----~slk~D~edl~~l~~ 98 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRS-SYNG----------Y-GT----FSLKDDVEDLKCLLE 98 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccc-cccc----------c-cc----ccccccHHHHHHHHH
Confidence 456799999999754 445689999999999987654321 1111 1 11 112233578888888
Q ss_pred HHHHhCCCCeEEEEEEChHHHHHHHHHHHhC-CCCccEEEEec
Q 021730 104 KAKEFTPGGKLSLIGHSAGGWLARVYMEEFG-SSDISLLLTLG 145 (308)
Q Consensus 104 ~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~-~~~v~~lv~lg 145 (308)
.+......+.|+|+|||-|+.-..+|+.+.- +..|+..|+.+
T Consensus 99 Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqA 141 (299)
T KOG4840|consen 99 HIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQA 141 (299)
T ss_pred HhhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhC
Confidence 7765444569999999999999999995421 12355555543
No 147
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=97.21 E-value=0.00052 Score=58.23 Aligned_cols=103 Identities=13% Similarity=0.092 Sum_probs=71.7
Q ss_pred CCCCCcEEEeCCCCCCchhHHHHHHHHHh-CCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHH
Q 021730 25 HFQCRPAVILPGLGNNSGDYQRLQLTLKD-YGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQ 103 (308)
Q Consensus 25 ~~~~~pvvlvHG~~~~~~~~~~l~~~L~~-~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 103 (308)
..+.++++++||..++....-.+++-+-. .+..|..++++.++-. .| .+..+.+.-|-+.+++
T Consensus 75 E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S---~G-------------spsE~GL~lDs~avld 138 (300)
T KOG4391|consen 75 ESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKS---EG-------------SPSEEGLKLDSEAVLD 138 (300)
T ss_pred cCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccC---CC-------------CccccceeccHHHHHH
Confidence 34778899999999999988888887644 4667777665555422 11 1222222345566777
Q ss_pred HHHHhC--CCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEe
Q 021730 104 KAKEFT--PGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTL 144 (308)
Q Consensus 104 ~l~~~~--~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~l 144 (308)
.+..+. ...++++.|.|+||.++...+++... ++.++|+-
T Consensus 139 yl~t~~~~dktkivlfGrSlGGAvai~lask~~~-ri~~~ivE 180 (300)
T KOG4391|consen 139 YLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD-RISAIIVE 180 (300)
T ss_pred HHhcCccCCcceEEEEecccCCeeEEEeeccchh-heeeeeee
Confidence 776432 34799999999999999999888554 78888753
No 148
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.18 E-value=0.0031 Score=55.19 Aligned_cols=47 Identities=15% Similarity=0.184 Sum_probs=36.1
Q ss_pred HHHHHHHHHhCCCC--eEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 99 NDAIQKAKEFTPGG--KLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 99 ~~~i~~l~~~~~~~--~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
++.+..+.++++.. +..|+||||||..++.++.++|. .+.+++++++
T Consensus 100 ~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd-~F~~~~~~S~ 148 (251)
T PF00756_consen 100 EELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPD-LFGAVIAFSG 148 (251)
T ss_dssp THHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTT-TESEEEEESE
T ss_pred ccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCcc-ccccccccCc
Confidence 34445555555532 27999999999999999999876 7999999974
No 149
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=97.13 E-value=0.00074 Score=60.26 Aligned_cols=42 Identities=24% Similarity=0.328 Sum_probs=32.6
Q ss_pred CCCCCCCCCc-EEEeCCCCCCchhHHHHHHHHHhCCCcEEEEe
Q 021730 21 PATSHFQCRP-AVILPGLGNNSGDYQRLQLTLKDYGVPTVVAE 62 (308)
Q Consensus 21 ~~~~~~~~~p-vvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~ 62 (308)
+.++...|-| |||-||++++..-|..+.-.|+.+||-|.++.
T Consensus 110 ~~~tk~~k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavE 152 (399)
T KOG3847|consen 110 PLSTKNDKYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVE 152 (399)
T ss_pred CCCCCCCCccEEEEecccccchhhHHHHhhhHhhCceEEEEee
Confidence 4444455544 55669999999999999999999999776643
No 150
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.13 E-value=0.0058 Score=54.39 Aligned_cols=115 Identities=17% Similarity=0.168 Sum_probs=71.2
Q ss_pred CCCCcEEEeCCCCCCchhHHHHH--HHHHh-CCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQ--LTLKD-YGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAI 102 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~--~~L~~-~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i 102 (308)
...+.||++||-.++...+.... +.|.+ .||-|...+=-...|.....+. +.+........++ +..|.+.+
T Consensus 59 ~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~-----~~~p~~~~~g~dd-Vgflr~lv 132 (312)
T COG3509 59 SGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGN-----WFGPADRRRGVDD-VGFLRALV 132 (312)
T ss_pred CCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccc-----cCCcccccCCccH-HHHHHHHH
Confidence 34467888899999988887665 55554 5776654321111232111110 0001111123333 46788888
Q ss_pred HHHHHhCCCC--eEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCC
Q 021730 103 QKAKEFTPGG--KLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTP 147 (308)
Q Consensus 103 ~~l~~~~~~~--~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP 147 (308)
+.+..+++.+ +|++.|.|.||.++..++.+++. ...++-.++.+
T Consensus 133 a~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~-~faa~A~VAg~ 178 (312)
T COG3509 133 AKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPD-IFAAIAPVAGL 178 (312)
T ss_pred HHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcc-cccceeeeecc
Confidence 8888888765 99999999999999999998765 45555555543
No 151
>COG3150 Predicted esterase [General function prediction only]
Probab=97.08 E-value=0.0056 Score=49.94 Aligned_cols=78 Identities=15% Similarity=0.148 Sum_probs=49.3
Q ss_pred EEEeCCCCCCchhHHH--HHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHh
Q 021730 31 AVILPGLGNNSGDYQR--LQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEF 108 (308)
Q Consensus 31 vvlvHG~~~~~~~~~~--l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~ 108 (308)
|+++|||.+++.+... +.+++...+-.+-. ..+ .........++.++++|.+
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~~~i~y-~~p---------------------~l~h~p~~a~~ele~~i~~---- 55 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDVRDIEY-STP---------------------HLPHDPQQALKELEKAVQE---- 55 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccccceee-ecC---------------------CCCCCHHHHHHHHHHHHHH----
Confidence 8999999999998873 44455555333211 100 0112344444445544444
Q ss_pred CCCCeEEEEEEChHHHHHHHHHHHhC
Q 021730 109 TPGGKLSLIGHSAGGWLARVYMEEFG 134 (308)
Q Consensus 109 ~~~~~v~lvGHSmGG~va~~~~~~~~ 134 (308)
.+.+...|||-|+||.-+..+...++
T Consensus 56 ~~~~~p~ivGssLGGY~At~l~~~~G 81 (191)
T COG3150 56 LGDESPLIVGSSLGGYYATWLGFLCG 81 (191)
T ss_pred cCCCCceEEeecchHHHHHHHHHHhC
Confidence 55567899999999999999887754
No 152
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.05 E-value=0.011 Score=51.44 Aligned_cols=112 Identities=19% Similarity=0.175 Sum_probs=67.1
Q ss_pred CCCCcEEEeCCCCCCchhHHHHHHHHHhC-C--CcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQLTLKDY-G--VPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAI 102 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~~~L~~~-G--~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i 102 (308)
.+++.++.|+|..+....|.++++.|.+. + ..++.+. .-+|..-.....+... .++.+.-.++ ++++..+
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIs--h~~H~~~P~sl~~~~s--~~~~eifsL~---~QV~HKl 99 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTIS--HAGHALMPASLREDHS--HTNEEIFSLQ---DQVDHKL 99 (301)
T ss_pred CCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEe--ccccccCCcccccccc--cccccccchh---hHHHHHH
Confidence 46778888999999999999999998764 2 3355432 1122110000000000 1111222333 3445555
Q ss_pred HHHHHhCC-CCeEEEEEEChHHHHHHHHHHH-hCCCCccEEEEe
Q 021730 103 QKAKEFTP-GGKLSLIGHSAGGWLARVYMEE-FGSSDISLLLTL 144 (308)
Q Consensus 103 ~~l~~~~~-~~~v~lvGHSmGG~va~~~~~~-~~~~~v~~lv~l 144 (308)
+-+.+..+ +.+++++|||-|+++.+..+.. ....+|.+.+++
T Consensus 100 aFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~L 143 (301)
T KOG3975|consen 100 AFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLL 143 (301)
T ss_pred HHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEe
Confidence 55554444 4799999999999999998873 334568888776
No 153
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.02 E-value=0.012 Score=55.94 Aligned_cols=36 Identities=17% Similarity=0.174 Sum_probs=31.1
Q ss_pred CeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 112 GKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 112 ~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
++..|+|+||||+.++..+.+++. .+.+++++++-+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd-~Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPE-RFGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcc-cccEEEEeccce
Confidence 578999999999999999998876 799999887643
No 154
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.02 E-value=0.0069 Score=55.03 Aligned_cols=93 Identities=16% Similarity=0.157 Sum_probs=64.3
Q ss_pred CCCCCcEEEeCCCCCCchhH-------HHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHH
Q 021730 25 HFQCRPAVILPGLGNNSGDY-------QRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSR 97 (308)
Q Consensus 25 ~~~~~pvvlvHG~~~~~~~~-------~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 97 (308)
..+.+-|++.-|.++..+.. ..+.+...+.|-.|+..+++..++. .| .+..+.++++
T Consensus 134 a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S---~G-------------~~s~~dLv~~ 197 (365)
T PF05677_consen 134 AKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSS---TG-------------PPSRKDLVKD 197 (365)
T ss_pred CCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccC---CC-------------CCCHHHHHHH
Confidence 45677899999988776661 2344445556778888654444321 11 1335667888
Q ss_pred HHHHHHHHHHhC---CCCeEEEEEEChHHHHHHHHHHHh
Q 021730 98 MNDAIQKAKEFT---PGGKLSLIGHSAGGWLARVYMEEF 133 (308)
Q Consensus 98 l~~~i~~l~~~~---~~~~v~lvGHSmGG~va~~~~~~~ 133 (308)
-+.++++++++. ..+++++-|||+||.++...+.++
T Consensus 198 ~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 198 YQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 899999998643 237899999999999999877764
No 155
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.02 E-value=0.0097 Score=51.13 Aligned_cols=119 Identities=15% Similarity=0.141 Sum_probs=48.1
Q ss_pred CCCcEEEeCCCCCCchhHH----HHHHHHHhCCCcEEEEeeccccc-ccc-cCCC--------CCcccccccCCCCC---
Q 021730 27 QCRPAVILPGLGNNSGDYQ----RLQLTLKDYGVPTVVAEVSRFDW-LRN-AAGL--------VDPNYWRATLRPRP--- 89 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~~~----~l~~~L~~~G~~v~~~~~~~~d~-~~~-~~g~--------~~~~~~~~~~~~~~--- 89 (308)
.+.-|+++||++.+...|. .+.+.|.+.++..+-++-+ +.. .+. .... ........+.....
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP-~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGP-HEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--S-EE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCC-cccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 4677999999999999988 4555555535665544311 111 000 0000 00001111211111
Q ss_pred cHHHHHHHHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHh-------CCCCccEEEEecCCC
Q 021730 90 VLDWYFSRMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEF-------GSSDISLLLTLGTPH 148 (308)
Q Consensus 90 ~~~~~~~~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~-------~~~~v~~lv~lgtP~ 148 (308)
....+.+.++...+.+.++.+ =.-|+|+|+|+.++..++... ....++-+|++++..
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~ 145 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFP 145 (212)
T ss_dssp GG---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES---
T ss_pred cccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccC
Confidence 111122233333333333222 246999999999999888642 123478788887643
No 156
>PLN02454 triacylglycerol lipase
Probab=96.96 E-value=0.0032 Score=59.00 Aligned_cols=58 Identities=26% Similarity=0.305 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHhCCCCe--EEEEEEChHHHHHHHHHHHhCC-----CCc-cEEEEecCCCCCC
Q 021730 94 YFSRMNDAIQKAKEFTPGGK--LSLIGHSAGGWLARVYMEEFGS-----SDI-SLLLTLGTPHLPP 151 (308)
Q Consensus 94 ~~~~l~~~i~~l~~~~~~~~--v~lvGHSmGG~va~~~~~~~~~-----~~v-~~lv~lgtP~~~~ 151 (308)
..+++...|+++.++++..+ |++.||||||.+|...+.+... ..+ -.++++|+|--|.
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQVGN 273 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCcccC
Confidence 34567777788888787665 9999999999999988765211 111 2457899998554
No 157
>PLN00413 triacylglycerol lipase
Probab=96.92 E-value=0.0045 Score=58.75 Aligned_cols=56 Identities=23% Similarity=0.376 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHh---C----CCCccEEEEecCCCCCCC
Q 021730 97 RMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEF---G----SSDISLLLTLGTPHLPPP 152 (308)
Q Consensus 97 ~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~---~----~~~v~~lv~lgtP~~~~~ 152 (308)
.+.+.++++.++++..++++.|||+||.+|..++... . ..++.++++.|.|--|..
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRVGN~ 331 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRVGDE 331 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCCccH
Confidence 4566677777778888999999999999999877531 1 124667899999995543
No 158
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.90 E-value=0.0025 Score=53.35 Aligned_cols=57 Identities=18% Similarity=0.282 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHH--hC---CCCccEEEEecCCCCCC
Q 021730 95 FSRMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEE--FG---SSDISLLLTLGTPHLPP 151 (308)
Q Consensus 95 ~~~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~--~~---~~~v~~lv~lgtP~~~~ 151 (308)
.+.+.+.|++...+.|..+++|+|+|+|+.++..++.. .+ ..+|.++|++|-|.+..
T Consensus 64 ~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 64 VANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRGA 125 (179)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTBT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcccC
Confidence 46777788888788999999999999999999998877 11 14699999999999643
No 159
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.90 E-value=0.02 Score=50.47 Aligned_cols=55 Identities=16% Similarity=0.207 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHHh---CCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 91 LDWYFSRMNDAIQKAKEF---TPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 91 ~~~~~~~l~~~i~~l~~~---~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
.+.+.+.|.+.+.-..++ ...++-.++|||+||++++..+..++. .+.+.+.+++
T Consensus 113 ~~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~-~F~~y~~~SP 170 (264)
T COG2819 113 GDAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPD-CFGRYGLISP 170 (264)
T ss_pred hHHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcc-hhceeeeecc
Confidence 455566666666654433 234568999999999999998888665 7888877654
No 160
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.90 E-value=0.0014 Score=63.07 Aligned_cols=109 Identities=17% Similarity=0.165 Sum_probs=69.8
Q ss_pred CCCcEEEeCCCC---CCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHH---
Q 021730 27 QCRPAVILPGLG---NNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMND--- 100 (308)
Q Consensus 27 ~~~pvvlvHG~~---~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~--- 100 (308)
..+.++++||.. .+...++.+-+.|...| .+ +.+..|+......| .++....+.+..
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~g-ev--vev~tfdl~n~igG--------------~nI~h~ae~~vSf~r 237 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKG-EV--VEVPTFDLNNPIGG--------------ANIKHAAEYSVSFDR 237 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhc-ee--eeeccccccCCCCC--------------cchHHHHHHHHHHhh
Confidence 445677889977 23455566777777766 32 33334554332111 123333333333
Q ss_pred -HHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCCCCC
Q 021730 101 -AIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHLPPP 152 (308)
Q Consensus 101 -~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~~~~ 152 (308)
.+.++..+++..+|+|+|.|||.+++.+......+..|..+|+||-|.+...
T Consensus 238 ~kvlei~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vd 290 (784)
T KOG3253|consen 238 YKVLEITGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVD 290 (784)
T ss_pred hhhhhhhccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCC
Confidence 3445556678899999999999988888766555556999999999998765
No 161
>PRK10115 protease 2; Provisional
Probab=96.86 E-value=0.005 Score=62.27 Aligned_cols=108 Identities=19% Similarity=0.114 Sum_probs=71.2
Q ss_pred CCCCcEEEeCCCCCCc--hhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCccccc-ccCCCCCcHHHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNS--GDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWR-ATLRPRPVLDWYFSRMNDAI 102 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~--~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~l~~~i 102 (308)
++.|.||++||-.+.. ..|....+.|.++||.|..+.++.-+=.| ..+.. +...... ..++|+.+++
T Consensus 443 ~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G-------~~w~~~g~~~~k~---~~~~D~~a~~ 512 (686)
T PRK10115 443 GHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELG-------QQWYEDGKFLKKK---NTFNDYLDAC 512 (686)
T ss_pred CCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccC-------HHHHHhhhhhcCC---CcHHHHHHHH
Confidence 4557888889966544 35777788899999999887765332111 11100 0000000 1257888888
Q ss_pred HHHHHhC--CCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEe
Q 021730 103 QKAKEFT--PGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTL 144 (308)
Q Consensus 103 ~~l~~~~--~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~l 144 (308)
+.+.++. ..+++.+.|-|.||+++...+.++|. ..+++|+.
T Consensus 513 ~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pd-lf~A~v~~ 555 (686)
T PRK10115 513 DALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPE-LFHGVIAQ 555 (686)
T ss_pred HHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChh-heeEEEec
Confidence 8887653 24789999999999999998877654 67777755
No 162
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.84 E-value=0.0042 Score=56.80 Aligned_cols=100 Identities=12% Similarity=0.214 Sum_probs=76.4
Q ss_pred CCCCCcEEEeCCCCCCchhHHHHHHHHHhC---C------CcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHH
Q 021730 25 HFQCRPAVILPGLGNNSGDYQRLQLTLKDY---G------VPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYF 95 (308)
Q Consensus 25 ~~~~~pvvlvHG~~~~~~~~~~l~~~L~~~---G------~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 95 (308)
...-.|++++|||.++-..|..++.-|.+. | |.|++..++.++|.... . ...+. .
T Consensus 149 ~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~-------s-------k~GFn--~ 212 (469)
T KOG2565|consen 149 KKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAP-------S-------KTGFN--A 212 (469)
T ss_pred CCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCC-------c-------cCCcc--H
Confidence 345569999999999999999999988764 3 34777788888886421 0 11121 2
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEE
Q 021730 96 SRMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLL 141 (308)
Q Consensus 96 ~~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~l 141 (308)
...+..++.+.-+.+..+..+=|--.|..|+..++.-+|. +|.++
T Consensus 213 ~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPe-nV~Gl 257 (469)
T KOG2565|consen 213 AATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPE-NVLGL 257 (469)
T ss_pred HHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcch-hhhHh
Confidence 4577788888888888999999999999999999988876 56554
No 163
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=96.82 E-value=0.0089 Score=53.33 Aligned_cols=110 Identities=15% Similarity=0.125 Sum_probs=68.1
Q ss_pred CCCCcEEEeCCCCCCchhHHHH----------HHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRL----------QLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYF 95 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l----------~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 95 (308)
++-|.||..|+++......... ...+.++||.|+..|++..+ .+.|. .. +....-.
T Consensus 18 ~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g---~S~G~---------~~--~~~~~e~ 83 (272)
T PF02129_consen 18 GPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTG---GSEGE---------FD--PMSPNEA 83 (272)
T ss_dssp SSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTST---TS-S----------B---TTSHHHH
T ss_pred CcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccc---cCCCc---------cc--cCChhHH
Confidence 4455666669998654222211 12389999999986654332 11121 11 1022235
Q ss_pred HHHHHHHHHHHHhCC--CCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCCCC
Q 021730 96 SRMNDAIQKAKEFTP--GGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHLPP 151 (308)
Q Consensus 96 ~~l~~~i~~l~~~~~--~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~~~ 151 (308)
+|..++|+.+.++ + ..+|-++|.|.+|......+...+ +.++.++...++....
T Consensus 84 ~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~-p~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 84 QDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRP-PHLKAIVPQSGWSDLY 139 (272)
T ss_dssp HHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT--TTEEEEEEESE-SBTC
T ss_pred HHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCC-CCceEEEecccCCccc
Confidence 7888899988765 4 369999999999999999887544 4799998877655443
No 164
>PLN02162 triacylglycerol lipase
Probab=96.81 E-value=0.0055 Score=58.05 Aligned_cols=57 Identities=23% Similarity=0.346 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHH---hCC----CCccEEEEecCCCCCCC
Q 021730 96 SRMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEE---FGS----SDISLLLTLGTPHLPPP 152 (308)
Q Consensus 96 ~~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~---~~~----~~v~~lv~lgtP~~~~~ 152 (308)
..+.+.++.+..+++..++++.|||+||.+|..++.. ++. .++.++++.|.|--|..
T Consensus 262 ~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRVGn~ 325 (475)
T PLN02162 262 YTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRVGDE 325 (475)
T ss_pred HHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCccCH
Confidence 4567777777777888899999999999999886542 121 23567899999995543
No 165
>PLN02934 triacylglycerol lipase
Probab=96.67 E-value=0.0069 Score=57.94 Aligned_cols=57 Identities=19% Similarity=0.300 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHh---CC----CCccEEEEecCCCCCCC
Q 021730 96 SRMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEF---GS----SDISLLLTLGTPHLPPP 152 (308)
Q Consensus 96 ~~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~---~~----~~v~~lv~lgtP~~~~~ 152 (308)
..+...|+.+.++++..++++.|||+||.+|..++... .. .++..+++.|.|--|..
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~L~l~~~~~~l~~~~~vYTFGsPRVGN~ 368 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTVLVLQEETEVMKRLLGVYTFGQPRIGNR 368 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHHHHHhcccccccCceEEEEeCCCCccCH
Confidence 45777788888889989999999999999998876431 11 23456889999985543
No 166
>KOG3101 consensus Esterase D [General function prediction only]
Probab=96.67 E-value=0.0025 Score=53.93 Aligned_cols=120 Identities=18% Similarity=0.181 Sum_probs=58.0
Q ss_pred CCcEEEeCCCCCCchhHH---HHHHHHHhCCCcEEEEeecccccccccCCCCC-ccccc-----------ccCCCCCcHH
Q 021730 28 CRPAVILPGLGNNSGDYQ---RLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVD-PNYWR-----------ATLRPRPVLD 92 (308)
Q Consensus 28 ~~pvvlvHG~~~~~~~~~---~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~-~~~~~-----------~~~~~~~~~~ 92 (308)
-+.+.++-|+.++...+. ..-+...++|..|+..|-+..+- ...|..+ +++.. -+.....+++
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~--~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYd 121 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGV--EVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYD 121 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCcc--ccCCCcccccccCCceeEEecccchHhhhhhHHH
Confidence 455667799999998876 33444556777666544221110 0111110 11100 0000123344
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEE---EEecCCCCC
Q 021730 93 WYFSRMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLL---LTLGTPHLP 150 (308)
Q Consensus 93 ~~~~~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~l---v~lgtP~~~ 150 (308)
...+.|-+.+..........++.|.||||||.=++.-..+.+. +-+++ .=|.-|.+-
T Consensus 122 Yv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~-kykSvSAFAPI~NP~~c 181 (283)
T KOG3101|consen 122 YVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPS-KYKSVSAFAPICNPINC 181 (283)
T ss_pred HHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcc-cccceeccccccCcccC
Confidence 3344444444321111223578999999999877654444333 34444 334444443
No 167
>PLN02408 phospholipase A1
Probab=96.61 E-value=0.0095 Score=55.10 Aligned_cols=56 Identities=18% Similarity=0.315 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHhCCCC--eEEEEEEChHHHHHHHHHHHhC----CCCccEEEEecCCCCCC
Q 021730 96 SRMNDAIQKAKEFTPGG--KLSLIGHSAGGWLARVYMEEFG----SSDISLLLTLGTPHLPP 151 (308)
Q Consensus 96 ~~l~~~i~~l~~~~~~~--~v~lvGHSmGG~va~~~~~~~~----~~~v~~lv~lgtP~~~~ 151 (308)
+.+.+.|+++.++++.+ +|++.||||||.+|...+.... ....-.+++.|+|--|.
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPRVGN 243 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPRVGN 243 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCCccc
Confidence 45566667777767654 5999999999999988776531 11233478899999554
No 168
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.61 E-value=0.0047 Score=59.59 Aligned_cols=57 Identities=23% Similarity=0.338 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHh-CC-CCeEEEEEEChHHHHHHHHHHHhC-----C-----CCccEEEEecCCCCCCCC
Q 021730 97 RMNDAIQKAKEF-TP-GGKLSLIGHSAGGWLARVYMEEFG-----S-----SDISLLLTLGTPHLPPPK 153 (308)
Q Consensus 97 ~l~~~i~~l~~~-~~-~~~v~lvGHSmGG~va~~~~~~~~-----~-----~~v~~lv~lgtP~~~~~~ 153 (308)
...+.++++.+. .+ .++|+-|||||||+++...+.+-- . .+.+++|++++||.|++.
T Consensus 509 Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrGS~l 577 (697)
T KOG2029|consen 509 RSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRGSRL 577 (697)
T ss_pred HHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCCCcc
Confidence 334444444432 22 579999999999999998877521 1 356789999999999864
No 169
>PLN02324 triacylglycerol lipase
Probab=96.51 E-value=0.011 Score=55.30 Aligned_cols=58 Identities=12% Similarity=0.278 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHhCCCC--eEEEEEEChHHHHHHHHHHHhC-------------CCCccEEEEecCCCCCCC
Q 021730 95 FSRMNDAIQKAKEFTPGG--KLSLIGHSAGGWLARVYMEEFG-------------SSDISLLLTLGTPHLPPP 152 (308)
Q Consensus 95 ~~~l~~~i~~l~~~~~~~--~v~lvGHSmGG~va~~~~~~~~-------------~~~v~~lv~lgtP~~~~~ 152 (308)
.+.+.+.|+.+.++++.+ +|++.||||||.+|...+...- ....-.+++.|+|--|..
T Consensus 196 reqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRVGN~ 268 (415)
T PLN02324 196 QEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRIGDH 268 (415)
T ss_pred HHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCcCCH
Confidence 355666677777777753 6999999999999988775420 001123778999985543
No 170
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.41 E-value=0.075 Score=48.91 Aligned_cols=111 Identities=18% Similarity=0.116 Sum_probs=66.7
Q ss_pred CCCCcEEEeCCCC---C--CchhHHHHHHHHHhC-CCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHH
Q 021730 26 FQCRPAVILPGLG---N--NSGDYQRLQLTLKDY-GVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMN 99 (308)
Q Consensus 26 ~~~~pvvlvHG~~---~--~~~~~~~l~~~L~~~-G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~ 99 (308)
...+.||++||-| + ....|..+..++.+. +.-|+.+ |||-.-. ...+ ..++...+.+.
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSV-----dYRLAPE--h~~P---------a~y~D~~~Al~ 151 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSV-----DYRLAPE--HPFP---------AAYDDGWAALK 151 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEec-----CcccCCC--CCCC---------ccchHHHHHHH
Confidence 5678899999955 2 366788888888654 4334443 3332100 0011 12333334444
Q ss_pred HHHHH--HHHhCCCCeEEEEEEChHHHHHHHHHHHhC-----CCCccEEEEecCCCCCCC
Q 021730 100 DAIQK--AKEFTPGGKLSLIGHSAGGWLARVYMEEFG-----SSDISLLLTLGTPHLPPP 152 (308)
Q Consensus 100 ~~i~~--l~~~~~~~~v~lvGHSmGG~va~~~~~~~~-----~~~v~~lv~lgtP~~~~~ 152 (308)
-..+. +.......+|.|+|=|.||-++...+.+.. ..++++.|+|-+=+.+.+
T Consensus 152 w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 152 WVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred HHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCC
Confidence 44442 222234578999999999999988777532 246899999976555543
No 171
>PLN02571 triacylglycerol lipase
Probab=96.40 E-value=0.01 Score=55.69 Aligned_cols=56 Identities=14% Similarity=0.218 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHhCCCC--eEEEEEEChHHHHHHHHHHHhC---C--------CCc-cEEEEecCCCCCC
Q 021730 96 SRMNDAIQKAKEFTPGG--KLSLIGHSAGGWLARVYMEEFG---S--------SDI-SLLLTLGTPHLPP 151 (308)
Q Consensus 96 ~~l~~~i~~l~~~~~~~--~v~lvGHSmGG~va~~~~~~~~---~--------~~v-~~lv~lgtP~~~~ 151 (308)
+++.+.|+.+.++++.+ +|++.||||||.+|...+.+.. - ..+ -.++++|+|.-|.
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN 277 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGD 277 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccC
Confidence 44555566666666554 6899999999999998776531 0 011 2467889999554
No 172
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.37 E-value=0.01 Score=51.45 Aligned_cols=50 Identities=28% Similarity=0.433 Sum_probs=36.7
Q ss_pred HHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhC---CCCccEEEEecCCCCC
Q 021730 100 DAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFG---SSDISLLLTLGTPHLP 150 (308)
Q Consensus 100 ~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~---~~~v~~lv~lgtP~~~ 150 (308)
+.++.+.+.++. ++.+.|||+||.+|...+.... ..+|.++++..+|-..
T Consensus 73 ~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 73 AYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred HHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 344555555544 5999999999999999887632 2478999988887643
No 173
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.27 E-value=0.01 Score=50.55 Aligned_cols=39 Identities=23% Similarity=0.224 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHhC-CCCeEEEEEEChHHHHHHHHHHHh
Q 021730 95 FSRMNDAIQKAKEFT-PGGKLSLIGHSAGGWLARVYMEEF 133 (308)
Q Consensus 95 ~~~l~~~i~~l~~~~-~~~~v~lvGHSmGG~va~~~~~~~ 133 (308)
..|+.++.+..+++. .+++++|+|||+|+++.+.++.++
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 568888888777665 457999999999999999999875
No 174
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=96.19 E-value=0.065 Score=47.77 Aligned_cols=106 Identities=12% Similarity=0.131 Sum_probs=70.8
Q ss_pred CCCCcEEEeCCCCCCchh-HHH-----HHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGD-YQR-----LQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMN 99 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~-~~~-----l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~ 99 (308)
+.|+.+|=.|.++.+..+ |+. -+..+.++ |.++-++.+... .|....+ ... +.|.+| +|+
T Consensus 44 ~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe-----~gAp~~p---~~y-~yPsmd----~LA 109 (326)
T KOG2931|consen 44 GNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQE-----DGAPSFP---EGY-PYPSMD----DLA 109 (326)
T ss_pred CCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccc-----cCCccCC---CCC-CCCCHH----HHH
Confidence 356667777999988766 663 34456566 777766554321 1111111 110 235554 556
Q ss_pred HHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 100 DAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 100 ~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
+.|..+++..+.+.|+-+|--.|+.|...|+.+++. +|.++|+|..
T Consensus 110 d~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~-rV~GLvLIn~ 155 (326)
T KOG2931|consen 110 DMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPE-RVLGLVLINC 155 (326)
T ss_pred HHHHHHHHhcCcceEEEecccccHHHHHHHHhcChh-heeEEEEEec
Confidence 666666666778899999999999999999999876 8999999964
No 175
>PLN02310 triacylglycerol lipase
Probab=96.14 E-value=0.019 Score=53.87 Aligned_cols=55 Identities=22% Similarity=0.324 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHhC----CCCeEEEEEEChHHHHHHHHHHHh---CCCCccEEEEecCCCCCC
Q 021730 97 RMNDAIQKAKEFT----PGGKLSLIGHSAGGWLARVYMEEF---GSSDISLLLTLGTPHLPP 151 (308)
Q Consensus 97 ~l~~~i~~l~~~~----~~~~v~lvGHSmGG~va~~~~~~~---~~~~v~~lv~lgtP~~~~ 151 (308)
.+.+.|+.+.+.+ +..+|++.||||||.+|...+.+. .....-.++++|+|.-|.
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPRVGN 251 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPRVGN 251 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCCccc
Confidence 3444445554433 235899999999999998877542 111223488999999554
No 176
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=96.08 E-value=0.017 Score=53.15 Aligned_cols=43 Identities=19% Similarity=0.322 Sum_probs=33.2
Q ss_pred CCCCeEEEEEEChHHHHHHHHHHHhCC----CCccEEEEecCCCCCC
Q 021730 109 TPGGKLSLIGHSAGGWLARVYMEEFGS----SDISLLLTLGTPHLPP 151 (308)
Q Consensus 109 ~~~~~v~lvGHSmGG~va~~~~~~~~~----~~v~~lv~lgtP~~~~ 151 (308)
.+.+||+|||||||+-+....+..... ..|+.++++|+|....
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 356799999999999998876665322 2389999999998543
No 177
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=96.07 E-value=0.11 Score=48.31 Aligned_cols=53 Identities=17% Similarity=0.197 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhC----CCCccEEEEecC
Q 021730 94 YFSRMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFG----SSDISLLLTLGT 146 (308)
Q Consensus 94 ~~~~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~----~~~v~~lv~lgt 146 (308)
++.++.+..+.+.+..+.++|+|+|-|.||.+++.++.... ....+++|+|++
T Consensus 177 QL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISP 233 (374)
T PF10340_consen 177 QLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISP 233 (374)
T ss_pred HHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECC
Confidence 34556666677775567799999999999999988776421 123578888854
No 178
>PLN02802 triacylglycerol lipase
Probab=96.01 E-value=0.015 Score=55.66 Aligned_cols=56 Identities=20% Similarity=0.337 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHhCCCC--eEEEEEEChHHHHHHHHHHHh---CCCC-ccEEEEecCCCCCC
Q 021730 96 SRMNDAIQKAKEFTPGG--KLSLIGHSAGGWLARVYMEEF---GSSD-ISLLLTLGTPHLPP 151 (308)
Q Consensus 96 ~~l~~~i~~l~~~~~~~--~v~lvGHSmGG~va~~~~~~~---~~~~-v~~lv~lgtP~~~~ 151 (308)
+++.+.|+.+.++++.+ +|++.||||||.++...+... .... .-.++++|+|--|.
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGsPRVGN 373 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGGPRVGN 373 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCCCCccc
Confidence 44555566666666653 689999999999998877643 1111 12578899998554
No 179
>COG4099 Predicted peptidase [General function prediction only]
Probab=95.98 E-value=0.023 Score=50.69 Aligned_cols=42 Identities=17% Similarity=0.195 Sum_probs=33.1
Q ss_pred HHHHhCCC--CeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 104 KAKEFTPG--GKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 104 ~l~~~~~~--~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
.+.+++.. .+|.++|.|+||..+..++.++|+ ...+.+.++.
T Consensus 259 vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd-fFAaa~~iaG 302 (387)
T COG4099 259 VLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD-FFAAAVPIAG 302 (387)
T ss_pred HHhhccCcccceEEEEeecCcchhhHHHHHhCch-hhheeeeecC
Confidence 44444443 689999999999999999999876 6777777765
No 180
>PLN02753 triacylglycerol lipase
Probab=95.88 E-value=0.023 Score=54.65 Aligned_cols=58 Identities=24% Similarity=0.304 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHhCC-----CCeEEEEEEChHHHHHHHHHHHh---CCC------Cc-cEEEEecCCCCCCC
Q 021730 95 FSRMNDAIQKAKEFTP-----GGKLSLIGHSAGGWLARVYMEEF---GSS------DI-SLLLTLGTPHLPPP 152 (308)
Q Consensus 95 ~~~l~~~i~~l~~~~~-----~~~v~lvGHSmGG~va~~~~~~~---~~~------~v-~~lv~lgtP~~~~~ 152 (308)
.+++.+.|+.+.++++ ..+|++.|||+||.+|...+.+. ... .+ -.++++|+|--|..
T Consensus 290 reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN~ 362 (531)
T PLN02753 290 REQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGNV 362 (531)
T ss_pred HHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccCH
Confidence 3455666666666654 35899999999999999877542 110 11 24888999985543
No 181
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=95.77 E-value=0.052 Score=45.96 Aligned_cols=112 Identities=16% Similarity=0.209 Sum_probs=61.4
Q ss_pred CCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccc--cCCCCCcccccccCC-------CCCcHHHHHHHH
Q 021730 28 CRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRN--AAGLVDPNYWRATLR-------PRPVLDWYFSRM 98 (308)
Q Consensus 28 ~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~--~~g~~~~~~~~~~~~-------~~~~~~~~~~~l 98 (308)
+..||++||++.+...|.++++.|.-.+..-+. + .--++.. ..|. ..+.|..... ....+....+.+
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIc-P--~aP~rpvt~~~G~-~~~aWfd~~~~~~~~~~d~~~~~~aa~~i 78 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLPNIKWIC-P--TAPSRPVTLNGGA-FMNAWFDIMELSSDAPEDEEGLHRAADNI 78 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCCCeeEEc-C--CCCCCcccccCCC-cccceecceeeCcccchhhhHHHHHHHHH
Confidence 457999999999999998888876555443322 1 1111110 0010 0111111110 112233333444
Q ss_pred HHHHHHHHHh-CCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEe
Q 021730 99 NDAIQKAKEF-TPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTL 144 (308)
Q Consensus 99 ~~~i~~l~~~-~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~l 144 (308)
.+.+++..+. .+..+|.+-|.||||.++++.+..++. .+.+++.+
T Consensus 79 ~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~-~l~G~~~~ 124 (206)
T KOG2112|consen 79 ANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPK-ALGGIFAL 124 (206)
T ss_pred HHHHHHHHHcCCCccceeEcccCchHHHHHHHHhcccc-ccceeecc
Confidence 4444443322 234678999999999999998887743 45555544
No 182
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.77 E-value=0.041 Score=52.91 Aligned_cols=41 Identities=27% Similarity=0.342 Sum_probs=29.0
Q ss_pred CeEEEEEEChHHHHHHHHHHHh----CCCCccEEEEecCCCCCCC
Q 021730 112 GKLSLIGHSAGGWLARVYMEEF----GSSDISLLLTLGTPHLPPP 152 (308)
Q Consensus 112 ~~v~lvGHSmGG~va~~~~~~~----~~~~v~~lv~lgtP~~~~~ 152 (308)
.++++.||||||.+|...+.+. +....-.+++.|+|--|..
T Consensus 318 ~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPRVGN~ 362 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAPRVGNL 362 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCCccCH
Confidence 4799999999999998877542 2111234678899985553
No 183
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=95.76 E-value=0.024 Score=54.98 Aligned_cols=51 Identities=12% Similarity=0.098 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHh---CC--CCeEEEEEEChHHHHHHHHHHHhC-CCCccEEEEecC
Q 021730 96 SRMNDAIQKAKEF---TP--GGKLSLIGHSAGGWLARVYMEEFG-SSDISLLLTLGT 146 (308)
Q Consensus 96 ~~l~~~i~~l~~~---~~--~~~v~lvGHSmGG~va~~~~~~~~-~~~v~~lv~lgt 146 (308)
.|...+++.+++. .+ ..+|+|+|||.||..+..++.... ...++++|+++.
T Consensus 155 ~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg 211 (493)
T cd00312 155 KDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSG 211 (493)
T ss_pred HHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcC
Confidence 4445555555432 22 369999999999999888776521 124777777654
No 184
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=95.75 E-value=0.0068 Score=51.05 Aligned_cols=105 Identities=17% Similarity=0.222 Sum_probs=65.9
Q ss_pred CcEEEeCCCCCC-chhHHHHHHHHHhC-CCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHH
Q 021730 29 RPAVILPGLGNN-SGDYQRLQLTLKDY-GVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAK 106 (308)
Q Consensus 29 ~pvvlvHG~~~~-~~~~~~l~~~L~~~-G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~ 106 (308)
.-|++++|..++ ..+|.+....|.+. -++++..|-+.++.. .++. + . -..+...+|-+.++.- .
T Consensus 43 ~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~S-------rPP~-R-k----f~~~ff~~Da~~avdL-M 108 (277)
T KOG2984|consen 43 NYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTS-------RPPE-R-K----FEVQFFMKDAEYAVDL-M 108 (277)
T ss_pred ceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCC-------CCCc-c-c----chHHHHHHhHHHHHHH-H
Confidence 568888996654 56788777777654 245555443333211 1110 0 0 1123334455555443 3
Q ss_pred HhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 107 EFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 107 ~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
+....+++.++|.|=||..++..+++++. .|.++|..|.--
T Consensus 109 ~aLk~~~fsvlGWSdGgiTalivAak~~e-~v~rmiiwga~a 149 (277)
T KOG2984|consen 109 EALKLEPFSVLGWSDGGITALIVAAKGKE-KVNRMIIWGAAA 149 (277)
T ss_pred HHhCCCCeeEeeecCCCeEEEEeeccChh-hhhhheeecccc
Confidence 44567899999999999999999988665 799998887643
No 185
>COG0627 Predicted esterase [General function prediction only]
Probab=95.66 E-value=0.046 Score=49.92 Aligned_cols=37 Identities=19% Similarity=0.191 Sum_probs=29.4
Q ss_pred eEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCCC
Q 021730 113 KLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHLP 150 (308)
Q Consensus 113 ~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~~ 150 (308)
+..|+||||||.=++.++.+++ ++.+.+..++.....
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~p-d~f~~~sS~Sg~~~~ 189 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHP-DRFKSASSFSGILSP 189 (316)
T ss_pred CceeEEEeccchhhhhhhhhCc-chhceeccccccccc
Confidence 6899999999999999999876 477777766554433
No 186
>PLN02847 triacylglycerol lipase
Probab=95.64 E-value=0.044 Score=53.48 Aligned_cols=39 Identities=26% Similarity=0.250 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHH
Q 021730 94 YFSRMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEE 132 (308)
Q Consensus 94 ~~~~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~ 132 (308)
+.+.+...|..+..+++.-+++++||||||.+|..++..
T Consensus 233 I~~~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 233 IAKLSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 344455556666677888899999999999998876553
No 187
>PLN02761 lipase class 3 family protein
Probab=95.63 E-value=0.039 Score=53.09 Aligned_cols=56 Identities=18% Similarity=0.271 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHhCC------CCeEEEEEEChHHHHHHHHHHHhC---C-------CCc-cEEEEecCCCCCC
Q 021730 96 SRMNDAIQKAKEFTP------GGKLSLIGHSAGGWLARVYMEEFG---S-------SDI-SLLLTLGTPHLPP 151 (308)
Q Consensus 96 ~~l~~~i~~l~~~~~------~~~v~lvGHSmGG~va~~~~~~~~---~-------~~v-~~lv~lgtP~~~~ 151 (308)
+++.+.|+.+.+.++ .-+|++.||||||.+|...+.+.. . ..+ -.++++|+|--|.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN 344 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGN 344 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCC
Confidence 445555666666552 247999999999999998775421 1 011 2377889998554
No 188
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=95.55 E-value=0.093 Score=46.87 Aligned_cols=105 Identities=10% Similarity=0.065 Sum_probs=60.6
Q ss_pred CCCcEEEeCCCCCCchh-HHHH-----HHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNSGD-YQRL-----QLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMND 100 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~-~~~l-----~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (308)
.++++|=.|-+|.+..+ |..+ ++.+.++ +.++-++.+...- |....+. . -..|.+|+ |++
T Consensus 22 ~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~-----ga~~~p~---~-y~yPsmd~----LAe 87 (283)
T PF03096_consen 22 NKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEE-----GAATLPE---G-YQYPSMDQ----LAE 87 (283)
T ss_dssp TS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTST-----T-----T---T------HHH----HHC
T ss_pred CCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCC-----Ccccccc---c-ccccCHHH----HHH
Confidence 67788888999988776 7644 3344444 8888777654321 1111110 0 02355554 555
Q ss_pred HHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 101 AIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 101 ~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
.|..+.+..+.+.++-+|=-.|+.|...|+.+++. +|.++|++.+
T Consensus 88 ~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~-~V~GLiLvn~ 132 (283)
T PF03096_consen 88 MLPEVLDHFGLKSVIGFGVGAGANILARFALKHPE-RVLGLILVNP 132 (283)
T ss_dssp THHHHHHHHT---EEEEEETHHHHHHHHHHHHSGG-GEEEEEEES-
T ss_pred HHHHHHHhCCccEEEEEeeccchhhhhhccccCcc-ceeEEEEEec
Confidence 55555555667899999999999999999999876 8999999975
No 189
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=95.48 E-value=0.032 Score=47.96 Aligned_cols=53 Identities=25% Similarity=0.345 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHhCC--CCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCCC
Q 021730 96 SRMNDAIQKAKEFTP--GGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHLP 150 (308)
Q Consensus 96 ~~l~~~i~~l~~~~~--~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~~ 150 (308)
|.++++++.++++-. .++|.|+|.|.||-+++.++..++ .|+.+|.+.++...
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~--~i~avVa~~ps~~~ 58 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP--QISAVVAISPSSVV 58 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS--SEEEEEEES--SB-
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC--CccEEEEeCCceeE
Confidence 456777888776432 368999999999999999999876 69999998765543
No 190
>PLN02719 triacylglycerol lipase
Probab=95.42 E-value=0.043 Score=52.67 Aligned_cols=57 Identities=19% Similarity=0.202 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHhCCC-----CeEEEEEEChHHHHHHHHHHHhC---C------CC-ccEEEEecCCCCCCC
Q 021730 96 SRMNDAIQKAKEFTPG-----GKLSLIGHSAGGWLARVYMEEFG---S------SD-ISLLLTLGTPHLPPP 152 (308)
Q Consensus 96 ~~l~~~i~~l~~~~~~-----~~v~lvGHSmGG~va~~~~~~~~---~------~~-v~~lv~lgtP~~~~~ 152 (308)
+++.+.|+.+.++++. .+|.+.||||||.+|...+.+.. . .. .-.++++|+|--|..
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN~ 348 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGNI 348 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccCH
Confidence 4555666666666653 48999999999999998775421 0 01 123788999985543
No 191
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=95.41 E-value=0.095 Score=51.03 Aligned_cols=108 Identities=14% Similarity=0.048 Sum_probs=55.2
Q ss_pred CCCcEEEeCCCC---CCc-hhHHHHHHHHHhCCCcEEEEeec--ccccccccCCCCCcccccccCCCCCcHHHHHHHHHH
Q 021730 27 QCRPAVILPGLG---NNS-GDYQRLQLTLKDYGVPTVVAEVS--RFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMND 100 (308)
Q Consensus 27 ~~~pvvlvHG~~---~~~-~~~~~l~~~L~~~G~~v~~~~~~--~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (308)
..|.+|+|||-+ ++. .....-...+.+.+.-|+.+.++ -+|+...... ..+ . .+.- +.|...
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~--~~~--~------gN~G--l~Dq~~ 191 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDL--DAP--S------GNYG--LLDQRL 191 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSST--TSH--B------STHH--HHHHHH
T ss_pred ccceEEEeecccccCCCcccccccccccccCCCEEEEEeccccccccccccccc--ccC--c------hhhh--hhhhHH
Confidence 457888999943 222 12233334445555555555433 2233321100 000 0 1111 345556
Q ss_pred HHHHHHHh---CCC--CeEEEEEEChHHHHHHHHHHHhC-CCCccEEEEecC
Q 021730 101 AIQKAKEF---TPG--GKLSLIGHSAGGWLARVYMEEFG-SSDISLLLTLGT 146 (308)
Q Consensus 101 ~i~~l~~~---~~~--~~v~lvGHSmGG~va~~~~~~~~-~~~v~~lv~lgt 146 (308)
+++.+++. .++ ++|+|.|||.||..+...+.... ...+++.|+.+.
T Consensus 192 AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG 243 (535)
T PF00135_consen 192 ALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSG 243 (535)
T ss_dssp HHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES-
T ss_pred HHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccc
Confidence 66666644 333 68999999999998887776522 235888888766
No 192
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.33 E-value=0.024 Score=49.94 Aligned_cols=122 Identities=17% Similarity=0.161 Sum_probs=72.5
Q ss_pred CCCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccc----cCCCCCcccc--cccCC--CCCcHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRN----AAGLVDPNYW--RATLR--PRPVLDWYFSR 97 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~----~~g~~~~~~~--~~~~~--~~~~~~~~~~~ 97 (308)
+..+.||-.||++++...|..+..+- ..||.|+..+++..+-... ..+....+.+ ++.+. ..-.+...+.|
T Consensus 81 ~~~P~vV~fhGY~g~~g~~~~~l~wa-~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D 159 (321)
T COG3458 81 GKLPAVVQFHGYGGRGGEWHDMLHWA-VAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLD 159 (321)
T ss_pred CccceEEEEeeccCCCCCcccccccc-ccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHH
Confidence 45566777799999998887776643 5689999877654432110 0110000000 11111 00112233567
Q ss_pred HHHHHHHHHHhC--CCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCCCC
Q 021730 98 MNDAIQKAKEFT--PGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHLPP 151 (308)
Q Consensus 98 l~~~i~~l~~~~--~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~~~ 151 (308)
+.++++.+.... ..++|.+-|-|.||.+++..+.- .++|++++.. -||.+.
T Consensus 160 ~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal--~~rik~~~~~-~Pfl~d 212 (321)
T COG3458 160 AVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAAL--DPRIKAVVAD-YPFLSD 212 (321)
T ss_pred HHHHHHHHhccCccchhheEEeccccCchhhhhhhhc--Chhhhccccc-cccccc
Confidence 777777766433 34799999999999999986653 2478888754 577554
No 193
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=94.97 E-value=0.061 Score=46.13 Aligned_cols=82 Identities=18% Similarity=0.321 Sum_probs=53.7
Q ss_pred CCCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAK 106 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~ 106 (308)
.+.-|||..||+.+...+..+.. ..+++++.+ +||+. + .++ . . +
T Consensus 10 ~~~LilfF~GWg~d~~~f~hL~~---~~~~D~l~~----yDYr~--------------l----~~d-----~--~---~- 53 (213)
T PF04301_consen 10 GKELILFFAGWGMDPSPFSHLIL---PENYDVLIC----YDYRD--------------L----DFD-----F--D---L- 53 (213)
T ss_pred CCeEEEEEecCCCChHHhhhccC---CCCccEEEE----ecCcc--------------c----ccc-----c--c---c-
Confidence 35789999999999988887642 346887764 55442 0 011 0 0 1
Q ss_pred HhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEE-ecCCCC
Q 021730 107 EFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLT-LGTPHL 149 (308)
Q Consensus 107 ~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~-lgtP~~ 149 (308)
...+.|.||+.|||-++|..++... ++++-|. -|||+-
T Consensus 54 --~~y~~i~lvAWSmGVw~A~~~l~~~---~~~~aiAINGT~~P 92 (213)
T PF04301_consen 54 --SGYREIYLVAWSMGVWAANRVLQGI---PFKRAIAINGTPYP 92 (213)
T ss_pred --ccCceEEEEEEeHHHHHHHHHhccC---CcceeEEEECCCCC
Confidence 2347999999999999998877643 3554444 466653
No 194
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=94.90 E-value=0.19 Score=51.54 Aligned_cols=86 Identities=14% Similarity=0.047 Sum_probs=56.8
Q ss_pred HHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHhC----------------
Q 021730 46 RLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEFT---------------- 109 (308)
Q Consensus 46 ~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~~---------------- 109 (308)
.+.++|.++||.|+..|....+ .+.|... .....-.++..++|+.+..+.
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg---~SeG~~~-----------~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~W 335 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTR---GSDGCPT-----------TGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADW 335 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCC---CCCCcCc-----------cCCHHHHHHHHHHHHHHhhCCccccccccccccccCC
Confidence 5678899999999986543221 1112110 111123567888888876321
Q ss_pred CCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 110 PGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 110 ~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
...+|.++|.|+||.++...+...+ +.++.+|..++
T Consensus 336 snGkVGm~G~SY~G~~~~~aAa~~p-p~LkAIVp~a~ 371 (767)
T PRK05371 336 SNGKVAMTGKSYLGTLPNAVATTGV-EGLETIIPEAA 371 (767)
T ss_pred CCCeeEEEEEcHHHHHHHHHHhhCC-CcceEEEeeCC
Confidence 2479999999999999998877644 46888887654
No 195
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=94.71 E-value=0.12 Score=47.64 Aligned_cols=56 Identities=27% Similarity=0.419 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHh---CC--CCccEEEEecCCCCCC
Q 021730 96 SRMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEF---GS--SDISLLLTLGTPHLPP 151 (308)
Q Consensus 96 ~~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~---~~--~~v~~lv~lgtP~~~~ 151 (308)
..+.+.++.+...++.-+|.+-||||||.+|...+..- +. ..-.++++.|.|--|.
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~PRvGn 215 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQPRVGN 215 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCCCccc
Confidence 46777788888888888999999999999988877642 21 1244788999998444
No 196
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=94.58 E-value=0.31 Score=43.97 Aligned_cols=86 Identities=19% Similarity=0.225 Sum_probs=47.0
Q ss_pred HHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHhC------CCCeEEEEEE
Q 021730 46 RLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEFT------PGGKLSLIGH 119 (308)
Q Consensus 46 ~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~~------~~~~v~lvGH 119 (308)
.++..+.++||.|++.| |.|-.. +|..+ .. ....+-+.|+..++.. ...++.++||
T Consensus 17 ~~l~~~L~~GyaVv~pD-----Y~Glg~-----~y~~~-----~~---~a~avLD~vRAA~~~~~~~gl~~~~~v~l~Gy 78 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPD-----YEGLGT-----PYLNG-----RS---EAYAVLDAVRAARNLPPKLGLSPSSRVALWGY 78 (290)
T ss_pred HHHHHHHHCCCEEEecC-----CCCCCC-----cccCc-----Hh---HHHHHHHHHHHHHhcccccCCCCCCCEEEEee
Confidence 56666778999998854 433110 22111 11 1223333344433222 2368999999
Q ss_pred ChHHHHHHHHHH---HhCC-CC--ccEEEEecCCCC
Q 021730 120 SAGGWLARVYME---EFGS-SD--ISLLLTLGTPHL 149 (308)
Q Consensus 120 SmGG~va~~~~~---~~~~-~~--v~~lv~lgtP~~ 149 (308)
|.||..+...++ .|.+ -+ +.+.+..++|.+
T Consensus 79 SqGG~Aa~~AA~l~~~YApeL~~~l~Gaa~gg~~~d 114 (290)
T PF03583_consen 79 SQGGQAALWAAELAPSYAPELNRDLVGAAAGGPPAD 114 (290)
T ss_pred CccHHHHHHHHHHhHHhCcccccceeEEeccCCccC
Confidence 999998766543 2322 34 666666665543
No 197
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=94.42 E-value=0.39 Score=41.67 Aligned_cols=54 Identities=24% Similarity=0.442 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCC-----CCccEEEEecCCCCCC
Q 021730 96 SRMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGS-----SDISLLLTLGTPHLPP 151 (308)
Q Consensus 96 ~~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~-----~~v~~lv~lgtP~~~~ 151 (308)
+.|.++|+.... ..++++++|+|+|+.++...+.+... ...-.+|++|-|.+..
T Consensus 34 ~~L~~ai~~~~~--~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP~rp~ 92 (225)
T PF08237_consen 34 ANLDAAIRAAIA--AGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNPRRPN 92 (225)
T ss_pred HHHHHHHHhhcc--CCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCCCCCC
Confidence 445555554322 56899999999999999988876422 1234689999997653
No 198
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=94.21 E-value=0.33 Score=46.43 Aligned_cols=116 Identities=16% Similarity=0.058 Sum_probs=58.9
Q ss_pred CCCCCcEEEeCCCC---CCchhHHHHHHHHHhCC-CcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHH
Q 021730 25 HFQCRPAVILPGLG---NNSGDYQRLQLTLKDYG-VPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMND 100 (308)
Q Consensus 25 ~~~~~pvvlvHG~~---~~~~~~~~l~~~L~~~G-~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (308)
....|.+|+|||=+ ++......=-..|+++| +-|+.++++ .+..|. .+.+..........++ -+.|...
T Consensus 91 a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYR-LG~lGf----L~~~~~~~~~~~~~n~--Gl~Dqil 163 (491)
T COG2272 91 AEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYR-LGALGF----LDLSSLDTEDAFASNL--GLLDQIL 163 (491)
T ss_pred CCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcc-ccccee----eehhhccccccccccc--cHHHHHH
Confidence 34568999999944 34444344456688887 333333322 122221 0111111000000010 1223333
Q ss_pred HHHHHHHh---CCC--CeEEEEEEChHHHHHHHHHHHhCCC--CccEEEEecCCC
Q 021730 101 AIQKAKEF---TPG--GKLSLIGHSAGGWLARVYMEEFGSS--DISLLLTLGTPH 148 (308)
Q Consensus 101 ~i~~l~~~---~~~--~~v~lvGHSmGG~va~~~~~~~~~~--~v~~lv~lgtP~ 148 (308)
+|+.++++ .++ ++|.|+|+|.|+..++.+++- |.. -++++|+++.+.
T Consensus 164 ALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 164 ALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAA 217 (491)
T ss_pred HHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCC
Confidence 44444322 333 689999999999999987764 332 266777776554
No 199
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=94.00 E-value=1.4 Score=41.96 Aligned_cols=61 Identities=16% Similarity=0.134 Sum_probs=46.2
Q ss_pred cHHHHHHHHHHHHHHHHHhC---CCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCCCC
Q 021730 90 VLDWYFSRMNDAIQKAKEFT---PGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHLPP 151 (308)
Q Consensus 90 ~~~~~~~~l~~~i~~l~~~~---~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~~~ 151 (308)
..++.++|++..++.+..+. ...|++++|=|-||.++..+-.+||+ -|.+.+.-++|....
T Consensus 88 t~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~-~~~ga~ASSapv~a~ 151 (434)
T PF05577_consen 88 TSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPH-LFDGAWASSAPVQAK 151 (434)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TT-T-SEEEEET--CCHC
T ss_pred CHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCC-eeEEEEeccceeeee
Confidence 46777899999999998654 34689999999999999999999987 688888888888653
No 200
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=93.98 E-value=0.81 Score=42.93 Aligned_cols=39 Identities=18% Similarity=0.261 Sum_probs=29.0
Q ss_pred CCCCCcEEEeCCCCCCchh--HHHHHHHHHhCCCcEEEEeec
Q 021730 25 HFQCRPAVILPGLGNNSGD--YQRLQLTLKDYGVPTVVAEVS 64 (308)
Q Consensus 25 ~~~~~pvvlvHG~~~~~~~--~~~l~~~L~~~G~~v~~~~~~ 64 (308)
...+..|++|+|+|++... ++.+.+.+++. |.|+++.+.
T Consensus 32 Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~-fnvv~I~V~ 72 (403)
T PF11144_consen 32 KEIKAIVFIIPGFGADANSNYLDFMREYIAKK-FNVVVISVN 72 (403)
T ss_pred CCceEEEEEeCCcCCCcchHHHHHHHHHHHHh-CCEEEEEee
Confidence 3456688999999998764 55788888776 887766543
No 201
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=93.74 E-value=0.14 Score=45.49 Aligned_cols=49 Identities=27% Similarity=0.467 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 96 SRMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 96 ~~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
.+.-+.+..+++.++..++.+-|||+||.+|..+-..++-+ +|++.+|-
T Consensus 260 Sa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fglP----~VaFesPG 308 (425)
T KOG4540|consen 260 SAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGLP----VVAFESPG 308 (425)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCCc----eEEecCch
Confidence 34445556667779999999999999999998876665543 56666665
No 202
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=93.74 E-value=0.14 Score=45.49 Aligned_cols=49 Identities=27% Similarity=0.467 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 96 SRMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 96 ~~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
.+.-+.+..+++.++..++.+-|||+||.+|..+-..++-+ +|++.+|-
T Consensus 260 Sa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fglP----~VaFesPG 308 (425)
T COG5153 260 SAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGLP----VVAFESPG 308 (425)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCCc----eEEecCch
Confidence 34445556667779999999999999999998876665543 56666665
No 203
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=93.66 E-value=0.73 Score=44.50 Aligned_cols=42 Identities=19% Similarity=0.086 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCC---CeEEEEEEChHHHHHHHHHHH
Q 021730 91 LDWYFSRMNDAIQKAKEFTPG---GKLSLIGHSAGGWLARVYMEE 132 (308)
Q Consensus 91 ~~~~~~~l~~~i~~l~~~~~~---~~v~lvGHSmGG~va~~~~~~ 132 (308)
.+...+++.+.++...++++. .+++|+|||+||..+..++.+
T Consensus 147 ~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~ 191 (462)
T PTZ00472 147 ESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYR 191 (462)
T ss_pred hHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHH
Confidence 455678888888877665654 799999999999998877764
No 204
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=93.30 E-value=0.1 Score=44.71 Aligned_cols=109 Identities=9% Similarity=0.114 Sum_probs=68.5
Q ss_pred CcEEEeCCCCC-CchhHHHHHHHHHhCCCcEEEEeecccc-cccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHH
Q 021730 29 RPAVILPGLGN-NSGDYQRLQLTLKDYGVPTVVAEVSRFD-WLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAK 106 (308)
Q Consensus 29 ~pvvlvHG~~~-~~~~~~~l~~~L~~~G~~v~~~~~~~~d-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~ 106 (308)
..||++--..+ .-..-...+..++..||.|++.|+-+-| |... .....++.|....+ .+...+++...++.++
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~-~~~~~~~~w~~~~~----~~~~~~~i~~v~k~lk 114 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPS-LQKSERPEWMKGHS----PPKIWKDITAVVKWLK 114 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCC-CChhhhHHHHhcCC----cccchhHHHHHHHHHH
Confidence 45555555444 4445788999999999999986543221 1110 01112333333222 1223467888888888
Q ss_pred HhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEe
Q 021730 107 EFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTL 144 (308)
Q Consensus 107 ~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~l 144 (308)
.+...++|-++|..|||-++..+....+ .+.+.+..
T Consensus 115 ~~g~~kkIGv~GfCwGak~vv~~~~~~~--~f~a~v~~ 150 (242)
T KOG3043|consen 115 NHGDSKKIGVVGFCWGAKVVVTLSAKDP--EFDAGVSF 150 (242)
T ss_pred HcCCcceeeEEEEeecceEEEEeeccch--hheeeeEe
Confidence 7666789999999999999888877644 46655544
No 205
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=92.68 E-value=1.1 Score=38.55 Aligned_cols=32 Identities=19% Similarity=0.226 Sum_probs=23.5
Q ss_pred CCCcEEEeCCCCCCchhHH----HHHHHHHhCCCcEE
Q 021730 27 QCRPAVILPGLGNNSGDYQ----RLQLTLKDYGVPTV 59 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~~~----~l~~~L~~~G~~v~ 59 (308)
.+.-|+++|||-.+...|. .+.+.|.+. ++.+
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~ 39 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELV 39 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEE
Confidence 4567999999999988887 566666665 5543
No 206
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=92.23 E-value=0.12 Score=35.32 Aligned_cols=24 Identities=21% Similarity=0.342 Sum_probs=14.2
Q ss_pred CCCCCCCCcEEEeCCCCCCchhHH
Q 021730 22 ATSHFQCRPAVILPGLGNNSGDYQ 45 (308)
Q Consensus 22 ~~~~~~~~pvvlvHG~~~~~~~~~ 45 (308)
......++||+|.||+.+++..|.
T Consensus 37 ~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 37 SNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp TTTTTT--EEEEE--TT--GGGGC
T ss_pred cccCCCCCcEEEECCcccChHHHH
Confidence 445578899999999999998883
No 207
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=92.05 E-value=1 Score=42.21 Aligned_cols=57 Identities=16% Similarity=0.149 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHHHHhCC--CCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 91 LDWYFSRMNDAIQKAKEFTP--GGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 91 ~~~~~~~l~~~i~~l~~~~~--~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
.++.++|.+..|..+++... ..+|+.+|-|.||+++..+=.+||+ -|.+.+.-+.|.
T Consensus 144 seQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPH-iv~GAlAaSAPv 202 (492)
T KOG2183|consen 144 SEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPH-IVLGALAASAPV 202 (492)
T ss_pred HHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChh-hhhhhhhccCce
Confidence 45567888888888876533 4689999999999999999888876 344444444443
No 208
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=91.72 E-value=0.86 Score=46.78 Aligned_cols=52 Identities=15% Similarity=0.245 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHhC--CCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 95 FSRMNDAIQKAKEFT--PGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 95 ~~~l~~~i~~l~~~~--~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
++|...+++.+.+.. ..++|.|.|+|-||.++...+.+.+..-++..+.+++
T Consensus 589 v~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaP 642 (755)
T KOG2100|consen 589 VKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAP 642 (755)
T ss_pred hHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecc
Confidence 355556666665433 2378999999999999999998865544455476654
No 209
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=91.33 E-value=0.4 Score=47.24 Aligned_cols=90 Identities=14% Similarity=0.143 Sum_probs=54.0
Q ss_pred HHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHhCC---CCeEEEEEEChHHH
Q 021730 48 QLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEFTP---GGKLSLIGHSAGGW 124 (308)
Q Consensus 48 ~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~~~---~~~v~lvGHSmGG~ 124 (308)
...|+..||-|+.+|-+..-++|- .++ +..+.+++... .+.+++.++ .+.++++ ..+|.+-|.|.||.
T Consensus 669 ~~~LaslGy~Vv~IDnRGS~hRGl---kFE-~~ik~kmGqVE-~eDQVeglq----~Laeq~gfidmdrV~vhGWSYGGY 739 (867)
T KOG2281|consen 669 FCRLASLGYVVVFIDNRGSAHRGL---KFE-SHIKKKMGQVE-VEDQVEGLQ----MLAEQTGFIDMDRVGVHGWSYGGY 739 (867)
T ss_pred hhhhhhcceEEEEEcCCCccccch---hhH-HHHhhccCeee-ehhhHHHHH----HHHHhcCcccchheeEeccccccH
Confidence 345788999999877554445441 000 11122232111 222333333 3333332 47899999999999
Q ss_pred HHHHHHHHhCCCCccEEEEecCCC
Q 021730 125 LARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 125 va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
++++.+.++|. |=++...|.|.
T Consensus 740 LSlm~L~~~P~--IfrvAIAGapV 761 (867)
T KOG2281|consen 740 LSLMGLAQYPN--IFRVAIAGAPV 761 (867)
T ss_pred HHHHHhhcCcc--eeeEEeccCcc
Confidence 99999998764 66666667765
No 210
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=91.11 E-value=0.76 Score=42.09 Aligned_cols=48 Identities=17% Similarity=0.205 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHh--CCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 97 RMNDAIQKAKEF--TPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 97 ~l~~~i~~l~~~--~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
.++.+++..... +..+.|+|.|.|.||.-+..++..||+ |+++|+=+|
T Consensus 294 A~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd--VkavvLDAt 343 (517)
T KOG1553|consen 294 AADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD--VKAVVLDAT 343 (517)
T ss_pred HHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC--ceEEEeecc
Confidence 344444444433 345889999999999999999988874 888876444
No 211
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.69 E-value=1.4 Score=42.38 Aligned_cols=42 Identities=19% Similarity=0.268 Sum_probs=31.4
Q ss_pred CCCCeEEEEEEChHHHHHHHHHHHh----CCCCccEEEEecCCCCC
Q 021730 109 TPGGKLSLIGHSAGGWLARVYMEEF----GSSDISLLLTLGTPHLP 150 (308)
Q Consensus 109 ~~~~~v~lvGHSmGG~va~~~~~~~----~~~~v~~lv~lgtP~~~ 150 (308)
.+.+||.|||+|+|.-+...-+... .-.-|..++++|+|.-.
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 5679999999999999877544321 11238899999999843
No 212
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=85.81 E-value=10 Score=32.85 Aligned_cols=104 Identities=15% Similarity=0.182 Sum_probs=57.4
Q ss_pred cEEEeCCCCCCchh-HHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHh
Q 021730 30 PAVILPGLGNNSGD-YQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEF 108 (308)
Q Consensus 30 pvvlvHG~~~~~~~-~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~ 108 (308)
|+|++=||.+.... ....++.-.+.|++++.+..+..+... +....... ++..++.+.+.
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~----------------~~~~~~~~---~~~l~~~l~~~ 61 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFW----------------PSKRLAPA---ADKLLELLSDS 61 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHee----------------eccchHHH---HHHHHHHhhhh
Confidence 67888888865543 345555556689998875432222110 00112222 22223333222
Q ss_pred CCC--CeEEEEEEChHHHHHHHHHHH-h--------CCCCccEEEEecCCCCCCC
Q 021730 109 TPG--GKLSLIGHSAGGWLARVYMEE-F--------GSSDISLLLTLGTPHLPPP 152 (308)
Q Consensus 109 ~~~--~~v~lvGHSmGG~va~~~~~~-~--------~~~~v~~lv~lgtP~~~~~ 152 (308)
... .++.+=..|+||......+.+ + ...+++++|+=++|..+..
T Consensus 62 ~~~~~~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~ 116 (240)
T PF05705_consen 62 QSASPPPILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTY 116 (240)
T ss_pred ccCCCCCEEEEEEECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCcccc
Confidence 222 389999999988776665542 1 1134888888788875543
No 213
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=85.24 E-value=3.8 Score=43.66 Aligned_cols=98 Identities=18% Similarity=0.244 Sum_probs=63.2
Q ss_pred CCCCCCcEEEeCCCCCCchhHHHHHHHHHh--CCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHH
Q 021730 24 SHFQCRPAVILPGLGNNSGDYQRLQLTLKD--YGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDA 101 (308)
Q Consensus 24 ~~~~~~pvvlvHG~~~~~~~~~~l~~~L~~--~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~ 101 (308)
.....+|++|||-.-+....+..++..|.= .|+.+.. .-+...++.. -+-.
T Consensus 2119 ~~se~~~~Ffv~pIEG~tt~l~~la~rle~PaYglQ~T~------------------------~vP~dSies~---A~~y 2171 (2376)
T KOG1202|consen 2119 VQSEEPPLFFVHPIEGFTTALESLASRLEIPAYGLQCTE------------------------AVPLDSIESL---AAYY 2171 (2376)
T ss_pred hcccCCceEEEeccccchHHHHHHHhhcCCcchhhhccc------------------------cCCcchHHHH---HHHH
Confidence 344678999999999999999999988742 2322211 0011223222 2334
Q ss_pred HHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCC-CCccEEEEec-CCC
Q 021730 102 IQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGS-SDISLLLTLG-TPH 148 (308)
Q Consensus 102 i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~-~~v~~lv~lg-tP~ 148 (308)
|+++++-.|..+..++|.|.|+.++...+..... .....+|++. +|-
T Consensus 2172 irqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2172 IRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred HHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 5556555778899999999999999988775322 2345577774 444
No 214
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=83.43 E-value=7.5 Score=38.20 Aligned_cols=20 Identities=30% Similarity=0.416 Sum_probs=17.3
Q ss_pred CeEEEEEEChHHHHHHHHHH
Q 021730 112 GKLSLIGHSAGGWLARVYME 131 (308)
Q Consensus 112 ~~v~lvGHSmGG~va~~~~~ 131 (308)
++|+++|||.||..+-.+..
T Consensus 195 ~~vTl~G~saGa~~v~~l~~ 214 (545)
T KOG1516|consen 195 KNVTLFGHSAGAASVSLLTL 214 (545)
T ss_pred CeEEEEeechhHHHHHHHhc
Confidence 78999999999998876554
No 215
>PLN02965 Probable pheophorbidase
Probab=82.12 E-value=0.65 Score=40.59 Aligned_cols=33 Identities=21% Similarity=0.074 Sum_probs=27.5
Q ss_pred cCCcccccccc-----ccCCCceeEeccccccCCCCCC
Q 021730 255 WGDGVVPEVSA-----HLEGALNISLDGVYHSPVGSDD 287 (308)
Q Consensus 255 ~~DgiVP~~sA-----~l~ga~~~~~~~~~H~~~~~~~ 287 (308)
..|.++|...+ .+++++.+++++++|.++.+.+
T Consensus 202 ~~D~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~p 239 (255)
T PLN02965 202 AKDNLFDPVRQDVMVENWPPAQTYVLEDSDHSAFFSVP 239 (255)
T ss_pred CCCCCCCHHHHHHHHHhCCcceEEEecCCCCchhhcCH
Confidence 57899988655 5889999999999999998653
No 216
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=75.09 E-value=2.4 Score=32.48 Aligned_cols=24 Identities=13% Similarity=0.261 Sum_probs=14.3
Q ss_pred CCCCCCcEEEeCCCCCCchhHHHH
Q 021730 24 SHFQCRPAVILPGLGNNSGDYQRL 47 (308)
Q Consensus 24 ~~~~~~pvvlvHG~~~~~~~~~~l 47 (308)
......|+||+||+.++-..|..+
T Consensus 88 ~~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 88 KRPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp S-TT-EEEEEE--SS--GGGGHHH
T ss_pred CCCCCeEEEEECCCCccHHhHHhh
Confidence 345677999999999998877665
No 217
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=72.79 E-value=6 Score=35.64 Aligned_cols=33 Identities=18% Similarity=0.139 Sum_probs=27.0
Q ss_pred eEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 113 KLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 113 ~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
.=+|.|-|+||+++++.+..++. .+..++..++
T Consensus 178 ~r~L~G~SlGG~vsL~agl~~Pe-~FG~V~s~Sp 210 (299)
T COG2382 178 GRVLAGDSLGGLVSLYAGLRHPE-RFGHVLSQSG 210 (299)
T ss_pred CcEEeccccccHHHHHHHhcCch-hhceeeccCC
Confidence 45899999999999999988876 6777776543
No 218
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=72.61 E-value=12 Score=33.36 Aligned_cols=34 Identities=26% Similarity=0.277 Sum_probs=24.2
Q ss_pred CCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEe
Q 021730 110 PGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTL 144 (308)
Q Consensus 110 ~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~l 144 (308)
+..++.++|-||||.++...-..++. .|..+=++
T Consensus 193 g~g~~~~~g~Smgg~~a~~vgS~~q~-Pva~~p~l 226 (371)
T KOG1551|consen 193 GLGNLNLVGRSMGGDIANQVGSLHQK-PVATAPCL 226 (371)
T ss_pred CcccceeeeeecccHHHHhhcccCCC-Cccccccc
Confidence 45799999999999999986654432 35444344
No 219
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=69.36 E-value=2 Score=36.14 Aligned_cols=32 Identities=22% Similarity=0.215 Sum_probs=26.0
Q ss_pred cCCcccccccc-----ccCCCceeEeccccccCCCCC
Q 021730 255 WGDGVVPEVSA-----HLEGALNISLDGVYHSPVGSD 286 (308)
Q Consensus 255 ~~DgiVP~~sA-----~l~ga~~~~~~~~~H~~~~~~ 286 (308)
..|.+||.+.+ .+++++.+++++++|.++..+
T Consensus 197 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~ 233 (245)
T TIGR01738 197 YLDGLVPAKVVPYLDKLAPHSELYIFAKAAHAPFLSH 233 (245)
T ss_pred cCCcccCHHHHHHHHHhCCCCeEEEeCCCCCCccccC
Confidence 56888887544 578999999999999998754
No 220
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=68.05 E-value=32 Score=28.67 Aligned_cols=34 Identities=18% Similarity=0.252 Sum_probs=27.6
Q ss_pred CeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 112 GKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 112 ~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
....+-|-|||+..+..+.-++|. -..++|.++.
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP~-lftkvialSG 134 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHPH-LFTKVIALSG 134 (227)
T ss_pred CCccccccchhhhhhhhhheeChh-Hhhhheeecc
Confidence 346778999999999999988776 5778888765
No 221
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=67.91 E-value=57 Score=25.57 Aligned_cols=67 Identities=10% Similarity=0.100 Sum_probs=41.6
Q ss_pred CCCCcEEEeCCCCCCchhHH--HHHHHHHhCCCc---EEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHH
Q 021730 26 FQCRPAVILPGLGNNSGDYQ--RLQLTLKDYGVP---TVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMND 100 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~~~~--~l~~~L~~~G~~---v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (308)
..|+-|+-+||+.++..+|. -+++.|-+.|-. |.. -+...+ ++.....+.|-++|.+
T Consensus 50 p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~-f~~~~h-----------------FP~~~~v~~Yk~~L~~ 111 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQ-FIATHH-----------------FPHNSNVDEYKEQLKS 111 (127)
T ss_pred CCCCEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceee-eccccc-----------------CCCchHHHHHHHHHHH
Confidence 34555666799999999987 578887776654 222 111122 1122346667788888
Q ss_pred HHHHHHHhCC
Q 021730 101 AIQKAKEFTP 110 (308)
Q Consensus 101 ~i~~l~~~~~ 110 (308)
.|.......+
T Consensus 112 ~I~~~v~~C~ 121 (127)
T PF06309_consen 112 WIRGNVSRCP 121 (127)
T ss_pred HHHHHHHhCC
Confidence 8887766443
No 222
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=66.35 E-value=82 Score=29.84 Aligned_cols=110 Identities=13% Similarity=0.080 Sum_probs=62.3
Q ss_pred EEEeCCCCCC-chhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCc-------ccccccCCCC----CcHHHHHHHH
Q 021730 31 AVILPGLGNN-SGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDP-------NYWRATLRPR----PVLDWYFSRM 98 (308)
Q Consensus 31 vvlvHG~~~~-~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~-------~~~~~~~~~~----~~~~~~~~~l 98 (308)
.|++=|...+ ...+..+.+.+.+.|..++.+|+...+-.... ...+. +......... ...+...+.+
T Consensus 3 tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~-~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 3 TIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFP-PDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred EEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCC-CCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 4455565555 46678899999999999999998766322100 00000 0000000000 1122223344
Q ss_pred HHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEE
Q 021730 99 NDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLL 142 (308)
Q Consensus 99 ~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv 142 (308)
...+..+.++...+-|+-+|=|+|..++...+...|- -+-+++
T Consensus 82 ~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPi-G~PKlm 124 (403)
T PF06792_consen 82 ARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPI-GFPKLM 124 (403)
T ss_pred HHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCC-CCCeEE
Confidence 4445555454445778899999999999998887654 244444
No 223
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=66.06 E-value=3.7 Score=38.07 Aligned_cols=46 Identities=22% Similarity=0.286 Sum_probs=31.0
Q ss_pred cCCccccccc----------cccCCCceeEeccccccCCCCCCCCCCCcCChHHHHHHHHH
Q 021730 255 WGDGVVPEVS----------AHLEGALNISLDGVYHSPVGSDDALRPWYGSPAVVEKWIHH 305 (308)
Q Consensus 255 ~~DgiVP~~s----------A~l~ga~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (308)
..|.++|... ..+++++.+++++++|.++.+.++. ..+.|.+|+..
T Consensus 301 ~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~-----~~~~I~~FL~~ 356 (360)
T PLN02679 301 DQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDL-----VHEKLLPWLAQ 356 (360)
T ss_pred CCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHH-----HHHHHHHHHHh
Confidence 4588888752 1368899999999999988764322 23445555543
No 224
>PRK10349 carboxylesterase BioH; Provisional
Probab=65.43 E-value=7.5 Score=33.62 Aligned_cols=31 Identities=23% Similarity=0.268 Sum_probs=26.2
Q ss_pred cCCcccccccc-----ccCCCceeEeccccccCCCC
Q 021730 255 WGDGVVPEVSA-----HLEGALNISLDGVYHSPVGS 285 (308)
Q Consensus 255 ~~DgiVP~~sA-----~l~ga~~~~~~~~~H~~~~~ 285 (308)
..|.++|.+.+ .+++++.+++++++|.++.+
T Consensus 205 ~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~e 240 (256)
T PRK10349 205 YLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFIS 240 (256)
T ss_pred CCCccCCHHHHHHHHHhCCCCeEEEeCCCCCCcccc
Confidence 56889988654 47999999999999999975
No 225
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=64.31 E-value=16 Score=36.08 Aligned_cols=86 Identities=15% Similarity=0.098 Sum_probs=53.6
Q ss_pred HHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHh-CCCCeEEEEEEChHHHHHHH
Q 021730 50 TLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEF-TPGGKLSLIGHSAGGWLARV 128 (308)
Q Consensus 50 ~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~-~~~~~v~lvGHSmGG~va~~ 128 (308)
.+..+||.|+..|++..+. +.|.++.-+ . .. .+|-.+.|+.+.++ ....+|..+|-|.+|.....
T Consensus 75 ~~aa~GYavV~qDvRG~~~---SeG~~~~~~--~----~E-----~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~ 140 (563)
T COG2936 75 WFAAQGYAVVNQDVRGRGG---SEGVFDPES--S----RE-----AEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLA 140 (563)
T ss_pred eeecCceEEEEeccccccc---CCcccceec--c----cc-----ccchhHHHHHHHhCCccCCeeeeecccHHHHHHHH
Confidence 6788999999877654331 223222111 0 01 23344445544432 34579999999999999999
Q ss_pred HHHHhCCCCccEEEEecCCCCC
Q 021730 129 YMEEFGSSDISLLLTLGTPHLP 150 (308)
Q Consensus 129 ~~~~~~~~~v~~lv~lgtP~~~ 150 (308)
+|...++ .++.++-..+.+..
T Consensus 141 ~Aa~~pP-aLkai~p~~~~~D~ 161 (563)
T COG2936 141 AAALQPP-ALKAIAPTEGLVDR 161 (563)
T ss_pred HHhcCCc-hheeeccccccccc
Confidence 8887655 68888766666543
No 226
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=63.52 E-value=3.6 Score=36.62 Aligned_cols=33 Identities=24% Similarity=0.057 Sum_probs=26.7
Q ss_pred cCCccccccccc-----cCCCceeEeccccccCCCCCC
Q 021730 255 WGDGVVPEVSAH-----LEGALNISLDGVYHSPVGSDD 287 (308)
Q Consensus 255 ~~DgiVP~~sA~-----l~ga~~~~~~~~~H~~~~~~~ 287 (308)
..|.++|...+. +++++.+++++++|.++.+++
T Consensus 243 ~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p 280 (294)
T PLN02824 243 EKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAP 280 (294)
T ss_pred cCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCH
Confidence 568889887663 677889999999999998653
No 227
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=63.28 E-value=6.4 Score=39.08 Aligned_cols=53 Identities=21% Similarity=0.251 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHhC--CCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCC
Q 021730 95 FSRMNDAIQKAKEFT--PGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHL 149 (308)
Q Consensus 95 ~~~l~~~i~~l~~~~--~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~ 149 (308)
++|+..+.++|.++. ...+..+.|.|.||+++-..+-+.|. -++ .+++..||.
T Consensus 530 f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPd-LF~-avia~Vpfm 584 (712)
T KOG2237|consen 530 FDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPD-LFG-AVIAKVPFM 584 (712)
T ss_pred HHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCch-Hhh-hhhhcCcce
Confidence 578888888887642 23689999999999999887665443 344 445677774
No 228
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=61.64 E-value=11 Score=28.22 Aligned_cols=30 Identities=30% Similarity=0.355 Sum_probs=26.5
Q ss_pred cCCcccccccc-----ccCCCceeEeccccccCCC
Q 021730 255 WGDGVVPEVSA-----HLEGALNISLDGVYHSPVG 284 (308)
Q Consensus 255 ~~DgiVP~~sA-----~l~ga~~~~~~~~~H~~~~ 284 (308)
..|-++|++.| .+++++++++++.+|..+.
T Consensus 43 ~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~ 77 (103)
T PF08386_consen 43 THDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYA 77 (103)
T ss_pred CcCCCCcHHHHHHHHHHCCCceEEEEeccCcceec
Confidence 56999999888 4899999999999999874
No 229
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=60.72 E-value=14 Score=30.29 Aligned_cols=77 Identities=16% Similarity=0.295 Sum_probs=48.4
Q ss_pred CcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHh
Q 021730 29 RPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEF 108 (308)
Q Consensus 29 ~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~ 108 (308)
..||++-||+..+.....+.- ..+++++.+ +|+.. ... ++| +.+
T Consensus 12 ~LIvyFaGwgtpps~v~HLil---peN~dl~lc----YDY~d-----l~l-----------dfD---------fsA---- 55 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLIL---PENHDLLLC----YDYQD-----LNL-----------DFD---------FSA---- 55 (214)
T ss_pred EEEEEEecCCCCHHHHhhccC---CCCCcEEEE----eehhh-----cCc-----------ccc---------hhh----
Confidence 478888999999887776642 346787653 34321 000 011 111
Q ss_pred CCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecC
Q 021730 109 TPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGT 146 (308)
Q Consensus 109 ~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgt 146 (308)
.+.+-+|+.|||-+++-..+... +.+..+.|..
T Consensus 56 --y~hirlvAwSMGVwvAeR~lqg~---~lksatAiNG 88 (214)
T COG2830 56 --YRHIRLVAWSMGVWVAERVLQGI---RLKSATAING 88 (214)
T ss_pred --hhhhhhhhhhHHHHHHHHHHhhc---cccceeeecC
Confidence 24678999999999999988754 4555555533
No 230
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=59.57 E-value=63 Score=27.85 Aligned_cols=38 Identities=26% Similarity=0.329 Sum_probs=25.1
Q ss_pred CCCCcEEEeCCCCCCch-hHHHHHHHHHhCCC-cEEEEee
Q 021730 26 FQCRPAVILPGLGNNSG-DYQRLQLTLKDYGV-PTVVAEV 63 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~~-~~~~l~~~L~~~G~-~v~~~~~ 63 (308)
.....|++.||...+.. +|.-+-..|.+.|| .|+++.+
T Consensus 136 k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~v 175 (265)
T COG4822 136 KDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAV 175 (265)
T ss_pred cCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEe
Confidence 34456666799887664 45566666788899 4666543
No 231
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=59.34 E-value=1.1e+02 Score=29.81 Aligned_cols=118 Identities=15% Similarity=0.117 Sum_probs=70.6
Q ss_pred CCCCcEEEe-CCCCCCchhHH-----HHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHH
Q 021730 26 FQCRPAVIL-PGLGNNSGDYQ-----RLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMN 99 (308)
Q Consensus 26 ~~~~pvvlv-HG~~~~~~~~~-----~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~ 99 (308)
.++.||+|. -|=+.-...|. .+.+..++.|-.|+.++-+.+| .+....+.+. .++ ..-...+.++|++
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG---~S~P~~~~st--~nl-k~LSs~QALaDla 156 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYG---QSSPIGDLST--SNL-KYLSSLQALADLA 156 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccc---cCCCCCCCcc--cch-hhhhHHHHHHHHH
Confidence 355566655 44333333342 5556666778788876533333 1100000000 001 1123455678999
Q ss_pred HHHHHHHHhCCC---CeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCCC
Q 021730 100 DAIQKAKEFTPG---GKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHLP 150 (308)
Q Consensus 100 ~~i~~l~~~~~~---~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~~ 150 (308)
+.|+++..+.+. .+.+..|-|.-|.++..+=+++|+ -|.+-|.-++|.+.
T Consensus 157 ~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPe-l~~GsvASSapv~A 209 (514)
T KOG2182|consen 157 EFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPE-LTVGSVASSAPVLA 209 (514)
T ss_pred HHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCch-hheeecccccceeE
Confidence 999998877643 389999999999999998888887 46666666667643
No 232
>PLN02511 hydrolase
Probab=58.91 E-value=12 Score=35.09 Aligned_cols=51 Identities=20% Similarity=0.184 Sum_probs=36.9
Q ss_pred cCCcccccccc------ccCCCceeEeccccccCCCCCCCC---CCCcCChHHHHHHHHHhh
Q 021730 255 WGDGVVPEVSA------HLEGALNISLDGVYHSPVGSDDAL---RPWYGSPAVVEKWIHHLL 307 (308)
Q Consensus 255 ~~DgiVP~~sA------~l~ga~~~~~~~~~H~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 307 (308)
.+|-++|.... .+++++.+++++++|..+.+.++. ..|+ .+.+.+|++...
T Consensus 307 ~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~--~~~i~~Fl~~~~ 366 (388)
T PLN02511 307 ANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWT--DPVVMEFLEALE 366 (388)
T ss_pred CCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccH--HHHHHHHHHHHH
Confidence 56889887653 367888999999999999866432 2454 677778887543
No 233
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=58.61 E-value=33 Score=28.61 Aligned_cols=26 Identities=15% Similarity=0.390 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEE
Q 021730 94 YFSRMNDAIQKAKEFTPGGKLSLIGH 119 (308)
Q Consensus 94 ~~~~l~~~i~~l~~~~~~~~v~lvGH 119 (308)
+.+.+...|+.+++.+|..+|.+|-|
T Consensus 76 ~~~~~~~fv~~iR~~hP~tPIllv~~ 101 (178)
T PF14606_consen 76 FRERLDGFVKTIREAHPDTPILLVSP 101 (178)
T ss_dssp HHHHHHHHHHHHHTT-SSS-EEEEE-
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEec
Confidence 34667777777777777777777653
No 234
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=57.95 E-value=47 Score=27.79 Aligned_cols=42 Identities=19% Similarity=0.206 Sum_probs=31.1
Q ss_pred CCCcEEEeCCCCCCc---hhHHHHHHHHHhCCCcEEEEeeccccc
Q 021730 27 QCRPAVILPGLGNNS---GDYQRLQLTLKDYGVPTVVAEVSRFDW 68 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~---~~~~~l~~~L~~~G~~v~~~~~~~~d~ 68 (308)
.++||+++||-.... ..-..+.+.|.+.|..+....++.-+|
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH 187 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGH 187 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SS
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCC
Confidence 678999999987643 444589999999999877666555554
No 235
>PRK07581 hypothetical protein; Validated
Probab=57.95 E-value=7.8 Score=35.35 Aligned_cols=47 Identities=13% Similarity=0.008 Sum_probs=31.9
Q ss_pred cCCcccccccc-----ccCCCceeEecc-ccccCCCCCCCCCCCcCChHHHHHHHHHh
Q 021730 255 WGDGVVPEVSA-----HLEGALNISLDG-VYHSPVGSDDALRPWYGSPAVVEKWIHHL 306 (308)
Q Consensus 255 ~~DgiVP~~sA-----~l~ga~~~~~~~-~~H~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (308)
..|.++|...+ .+++++.+++++ ++|.++...++. + -+.|..+++.+
T Consensus 284 ~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~---~--~~~~~~~~~~~ 336 (339)
T PRK07581 284 STDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQNPA---D--IAFIDAALKEL 336 (339)
T ss_pred CCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCcHH---H--HHHHHHHHHHH
Confidence 45889987544 479999999998 999988754322 1 25555555544
No 236
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=57.86 E-value=1.1e+02 Score=27.45 Aligned_cols=39 Identities=23% Similarity=0.331 Sum_probs=28.9
Q ss_pred CeEEEEEEChHHHHHHHHHHHh--CCCCccEEEEecCCCCC
Q 021730 112 GKLSLIGHSAGGWLARVYMEEF--GSSDISLLLTLGTPHLP 150 (308)
Q Consensus 112 ~~v~lvGHSmGG~va~~~~~~~--~~~~v~~lv~lgtP~~~ 150 (308)
.++++.|-|+|+.-+....... -..++.+.+..|+|+..
T Consensus 109 PkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s 149 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFS 149 (289)
T ss_pred CeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCC
Confidence 5899999999998766544321 12469999999999844
No 237
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=57.16 E-value=1.5e+02 Score=27.41 Aligned_cols=37 Identities=24% Similarity=0.304 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHhC-CCCeEEEEEEChHHHHHHHHHHH
Q 021730 96 SRMNDAIQKAKEFT-PGGKLSLIGHSAGGWLARVYMEE 132 (308)
Q Consensus 96 ~~l~~~i~~l~~~~-~~~~v~lvGHSmGG~va~~~~~~ 132 (308)
+.+..+-..+...+ ++.+|.++|+|-|+.+++.++.-
T Consensus 105 ~nI~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 105 QNIREAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 34555555555554 56899999999999999998864
No 238
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=55.03 E-value=5 Score=34.83 Aligned_cols=32 Identities=19% Similarity=0.044 Sum_probs=25.2
Q ss_pred cCCcccccccc-----ccCCCceeEeccccccCCCCC
Q 021730 255 WGDGVVPEVSA-----HLEGALNISLDGVYHSPVGSD 286 (308)
Q Consensus 255 ~~DgiVP~~sA-----~l~ga~~~~~~~~~H~~~~~~ 286 (308)
..|.+||...+ .+++++.+.+++++|..+.++
T Consensus 229 ~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~ 265 (278)
T TIGR03056 229 EEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQ 265 (278)
T ss_pred CCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccC
Confidence 56888886443 478889999999999988754
No 239
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=54.98 E-value=83 Score=31.37 Aligned_cols=42 Identities=29% Similarity=0.333 Sum_probs=27.9
Q ss_pred CCCeEEEEEEChHHHHHHHHHH---HhCCCCccEEEEecCCCCCC
Q 021730 110 PGGKLSLIGHSAGGWLARVYME---EFGSSDISLLLTLGTPHLPP 151 (308)
Q Consensus 110 ~~~~v~lvGHSmGG~va~~~~~---~~~~~~v~~lv~lgtP~~~~ 151 (308)
.+++|+++|-|.||.+..-.+. .++-....++++.-+|+.-.
T Consensus 467 TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl~q 511 (880)
T KOG4388|consen 467 TGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTLLQ 511 (880)
T ss_pred ccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChhhcc
Confidence 4689999999999976544333 24543346777666676544
No 240
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=53.71 E-value=13 Score=33.31 Aligned_cols=29 Identities=24% Similarity=0.026 Sum_probs=24.6
Q ss_pred cCCcccccccc-----ccCCCceeEeccccccCC
Q 021730 255 WGDGVVPEVSA-----HLEGALNISLDGVYHSPV 283 (308)
Q Consensus 255 ~~DgiVP~~sA-----~l~ga~~~~~~~~~H~~~ 283 (308)
..|.+||...+ .+++++.+++++++|.++
T Consensus 257 ~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~ 290 (306)
T TIGR01249 257 RYDLCCPLQSAWALHKAFPEAELKVTNNAGHSAF 290 (306)
T ss_pred CCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCCC
Confidence 67899999765 478889999999999986
No 241
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=50.82 E-value=61 Score=32.59 Aligned_cols=43 Identities=16% Similarity=0.181 Sum_probs=32.0
Q ss_pred CCCCcEEEeCCCCCCc---hhHHHHHHHHHhCCCcEEEEeeccccc
Q 021730 26 FQCRPAVILPGLGNNS---GDYQRLQLTLKDYGVPTVVAEVSRFDW 68 (308)
Q Consensus 26 ~~~~pvvlvHG~~~~~---~~~~~l~~~L~~~G~~v~~~~~~~~d~ 68 (308)
.-+.|++||||..... ..-..+.+.|+++|..+..+-++..+|
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H 594 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGH 594 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCc
Confidence 5678999999987543 344588899999999887766655544
No 242
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=48.22 E-value=29 Score=31.02 Aligned_cols=31 Identities=23% Similarity=0.088 Sum_probs=22.7
Q ss_pred HHHHHHHhCCCCeEEEEEEChHHHHHHHHHH
Q 021730 101 AIQKAKEFTPGGKLSLIGHSAGGWLARVYME 131 (308)
Q Consensus 101 ~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~ 131 (308)
++-++..+.+.++..++|||+|=+.+...+.
T Consensus 65 al~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 65 AAWRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 3344444566789999999999988877654
No 243
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=47.76 E-value=6.1 Score=38.95 Aligned_cols=54 Identities=17% Similarity=0.134 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHhC--CCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 93 WYFSRMNDAIQKAKEFT--PGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 93 ~~~~~l~~~i~~l~~~~--~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
..++|..++.+.+.++. ..+++-+-|-|.||++.-..+.++|. .+.++ ++..|.
T Consensus 479 ~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPe-lfgA~-v~evPl 534 (648)
T COG1505 479 NVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPE-LFGAA-VCEVPL 534 (648)
T ss_pred hhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChh-hhCce-eeccch
Confidence 34678888888877642 23689999999999998887777665 34444 445554
No 244
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=46.91 E-value=44 Score=33.59 Aligned_cols=54 Identities=19% Similarity=0.210 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHhC--CCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCCC
Q 021730 95 FSRMNDAIQKAKEFT--PGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHLP 150 (308)
Q Consensus 95 ~~~l~~~i~~l~~~~--~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~~ 150 (308)
++|+.++.+.|.++. ..+.++++|-|.||++.-..+-..|. ..+++| ...||-.
T Consensus 508 f~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~-lf~~ii-A~VPFVD 563 (682)
T COG1770 508 FTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPD-LFAGII-AQVPFVD 563 (682)
T ss_pred HHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChh-hhhhee-ecCCccc
Confidence 466777777776542 23589999999999999887766443 455554 5678843
No 245
>PRK03592 haloalkane dehalogenase; Provisional
Probab=46.17 E-value=9.4 Score=33.90 Aligned_cols=32 Identities=3% Similarity=-0.137 Sum_probs=23.4
Q ss_pred cCCcccccccc------ccCCCceeEeccccccCCCCC
Q 021730 255 WGDGVVPEVSA------HLEGALNISLDGVYHSPVGSD 286 (308)
Q Consensus 255 ~~DgiVP~~sA------~l~ga~~~~~~~~~H~~~~~~ 286 (308)
..|.++|...+ .+++++.+++++++|.++..+
T Consensus 237 ~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 274 (295)
T PRK03592 237 EPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDS 274 (295)
T ss_pred cCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcC
Confidence 46888843222 367888999999999999754
No 246
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=45.23 E-value=19 Score=32.66 Aligned_cols=30 Identities=23% Similarity=0.151 Sum_probs=22.6
Q ss_pred HHHHHHhCCCCeEEEEEEChHHHHHHHHHH
Q 021730 102 IQKAKEFTPGGKLSLIGHSAGGWLARVYME 131 (308)
Q Consensus 102 i~~l~~~~~~~~v~lvGHSmGG~va~~~~~ 131 (308)
+-++.+..+.++-.++|||+|=+.+...+.
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTT
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCC
Confidence 344445677789999999999888776544
No 247
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=45.02 E-value=34 Score=30.45 Aligned_cols=28 Identities=18% Similarity=0.028 Sum_probs=21.2
Q ss_pred HHHHhCCCCeEEEEEEChHHHHHHHHHH
Q 021730 104 KAKEFTPGGKLSLIGHSAGGWLARVYME 131 (308)
Q Consensus 104 ~l~~~~~~~~v~lvGHSmGG~va~~~~~ 131 (308)
++..+.+.++-.++|||+|-+.+...+.
T Consensus 74 ~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 74 RLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 3334567788899999999988877554
No 248
>PRK03204 haloalkane dehalogenase; Provisional
Probab=44.14 E-value=11 Score=33.59 Aligned_cols=32 Identities=13% Similarity=0.001 Sum_probs=24.3
Q ss_pred cCCcccccc-c-----cccCCCceeEeccccccCCCCC
Q 021730 255 WGDGVVPEV-S-----AHLEGALNISLDGVYHSPVGSD 286 (308)
Q Consensus 255 ~~DgiVP~~-s-----A~l~ga~~~~~~~~~H~~~~~~ 286 (308)
..|.++|.. . ..+++++.+++++++|.++.+.
T Consensus 236 ~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~ 273 (286)
T PRK03204 236 MKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDA 273 (286)
T ss_pred CCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccC
Confidence 457777543 2 2589999999999999999864
No 249
>PRK06489 hypothetical protein; Provisional
Probab=43.98 E-value=13 Score=34.29 Aligned_cols=45 Identities=9% Similarity=0.116 Sum_probs=30.6
Q ss_pred cCCcccccccc-------ccCCCceeEeccc----cccCCCCCCCCCCCcCChHHHHHHHHH
Q 021730 255 WGDGVVPEVSA-------HLEGALNISLDGV----YHSPVGSDDALRPWYGSPAVVEKWIHH 305 (308)
Q Consensus 255 ~~DgiVP~~sA-------~l~ga~~~~~~~~----~H~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (308)
..|.++|.+.+ .+++++.++++++ +|.++ .+++. ..+.|.+|++.
T Consensus 301 ~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~-----~~~~i~~FL~~ 356 (360)
T PRK06489 301 ADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKF-----WKAYLAEFLAQ 356 (360)
T ss_pred CCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHH-----HHHHHHHHHHh
Confidence 56889987643 4899999999995 99987 33322 23555555543
No 250
>PRK02399 hypothetical protein; Provisional
Probab=42.64 E-value=3.1e+02 Score=26.12 Aligned_cols=110 Identities=14% Similarity=0.057 Sum_probs=60.9
Q ss_pred EEEeCCCCCCc-hhHHHHHHHHHhCCCcEEEEeeccccccccc-----------CCCCCcccccccCCCCCcHHHHHHHH
Q 021730 31 AVILPGLGNNS-GDYQRLQLTLKDYGVPTVVAEVSRFDWLRNA-----------AGLVDPNYWRATLRPRPVLDWYFSRM 98 (308)
Q Consensus 31 vvlvHG~~~~~-~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~-----------~g~~~~~~~~~~~~~~~~~~~~~~~l 98 (308)
.|++=|...+. ..+..+.+.+.+.|..|+.+|+...+..... .|. +............-.+...+..
T Consensus 5 ~I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~-~~~~~~~~~dRg~ai~~M~~ga 83 (406)
T PRK02399 5 RIYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGD-GIEAVFCGGDRGSAMAAMAEGA 83 (406)
T ss_pred EEEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCC-CHHHhhcCccHHHHHHHHHHHH
Confidence 35666766665 5567888888888999999998544311100 000 0000000000000112223334
Q ss_pred HHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEE
Q 021730 99 NDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLL 142 (308)
Q Consensus 99 ~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv 142 (308)
...++.+.++....-++-+|=|+|..++...+...|- -+-+++
T Consensus 84 ~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPi-G~PKlm 126 (406)
T PRK02399 84 AAFVRELYERGDVAGVIGLGGSGGTALATPAMRALPI-GVPKLM 126 (406)
T ss_pred HHHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCC-CCCeEE
Confidence 4444444444556788999999999999998887654 344444
No 251
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=42.44 E-value=2.4e+02 Score=26.77 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=23.5
Q ss_pred CCcEEEeCCCCCCch---hHHHHHHHHHhCCCcEEE
Q 021730 28 CRPAVILPGLGNNSG---DYQRLQLTLKDYGVPTVV 60 (308)
Q Consensus 28 ~~pvvlvHG~~~~~~---~~~~l~~~L~~~G~~v~~ 60 (308)
+.|||+++.+..... ....-...|.+.|+.++.
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~ 151 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIG 151 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEEC
Confidence 679999997654332 245777788889987764
No 252
>PRK10673 acyl-CoA esterase; Provisional
Probab=41.86 E-value=13 Score=31.90 Aligned_cols=31 Identities=16% Similarity=0.073 Sum_probs=23.5
Q ss_pred CCcccccccc-----ccCCCceeEeccccccCCCCC
Q 021730 256 GDGVVPEVSA-----HLEGALNISLDGVYHSPVGSD 286 (308)
Q Consensus 256 ~DgiVP~~sA-----~l~ga~~~~~~~~~H~~~~~~ 286 (308)
.|..|+.+.+ .+++++.+++++++|.++..+
T Consensus 205 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 240 (255)
T PRK10673 205 NSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEK 240 (255)
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccC
Confidence 4666666544 368999999999999988754
No 253
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=41.37 E-value=9.7 Score=34.91 Aligned_cols=46 Identities=17% Similarity=0.109 Sum_probs=32.2
Q ss_pred cCCcccccccc-----cc-CCCceeEecc-ccccCCCCCCCCCCCcCChHHHHHHHHH
Q 021730 255 WGDGVVPEVSA-----HL-EGALNISLDG-VYHSPVGSDDALRPWYGSPAVVEKWIHH 305 (308)
Q Consensus 255 ~~DgiVP~~sA-----~l-~ga~~~~~~~-~~H~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (308)
..|.++|...+ .+ ++++.+++++ ++|.++.+.++. ..+.+.+|+..
T Consensus 286 ~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~-----~~~~l~~FL~~ 338 (343)
T PRK08775 286 EGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDR-----IDAILTTALRS 338 (343)
T ss_pred CCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHH-----HHHHHHHHHHh
Confidence 56899997533 35 6899999985 999999875433 34556666653
No 254
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=41.35 E-value=39 Score=29.90 Aligned_cols=26 Identities=23% Similarity=0.003 Sum_probs=19.9
Q ss_pred HHhCC-CCeEEEEEEChHHHHHHHHHH
Q 021730 106 KEFTP-GGKLSLIGHSAGGWLARVYME 131 (308)
Q Consensus 106 ~~~~~-~~~v~lvGHSmGG~va~~~~~ 131 (308)
..+.+ .++..++|||+|=+.+...+.
T Consensus 76 l~~~g~i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 76 LKEQGGLKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHcCCCCCCEEeecCHHHHHHHHHhC
Confidence 33445 788999999999988777654
No 255
>PRK00870 haloalkane dehalogenase; Provisional
Probab=40.96 E-value=19 Score=32.16 Aligned_cols=32 Identities=19% Similarity=0.158 Sum_probs=23.4
Q ss_pred cCCcccccccc----ccCCCc---eeEeccccccCCCCC
Q 021730 255 WGDGVVPEVSA----HLEGAL---NISLDGVYHSPVGSD 286 (308)
Q Consensus 255 ~~DgiVP~~sA----~l~ga~---~~~~~~~~H~~~~~~ 286 (308)
..|.++|.... .+++++ .+.+++++|.++...
T Consensus 248 ~~D~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 286 (302)
T PRK00870 248 DSDPITGGGDAILQKRIPGAAGQPHPTIKGAGHFLQEDS 286 (302)
T ss_pred CCCCcccCchHHHHhhcccccccceeeecCCCccchhhC
Confidence 45888886442 367665 688999999998754
No 256
>PLN02578 hydrolase
Probab=40.50 E-value=18 Score=33.35 Aligned_cols=32 Identities=19% Similarity=0.024 Sum_probs=24.6
Q ss_pred cCCcccccccc-----ccCCCceeEeccccccCCCCCC
Q 021730 255 WGDGVVPEVSA-----HLEGALNISLDGVYHSPVGSDD 287 (308)
Q Consensus 255 ~~DgiVP~~sA-----~l~ga~~~~~~~~~H~~~~~~~ 287 (308)
..|.+||...+ .+++++.+++ +++|.++.+.+
T Consensus 305 ~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~p 341 (354)
T PLN02578 305 DLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHDEVP 341 (354)
T ss_pred CCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccccCH
Confidence 45888988766 3788888888 58999987653
No 257
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=40.36 E-value=2.3e+02 Score=23.93 Aligned_cols=46 Identities=20% Similarity=0.236 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhCCCCeEEEEEECh----HHHHHHHHHHHhCCCCccEEEEe
Q 021730 98 MNDAIQKAKEFTPGGKLSLIGHSA----GGWLARVYMEEFGSSDISLLLTL 144 (308)
Q Consensus 98 l~~~i~~l~~~~~~~~v~lvGHSm----GG~va~~~~~~~~~~~v~~lv~l 144 (308)
+.+++.++.++.+ -.++|+|||. |..++-..+.+.+...+..++-+
T Consensus 96 ~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 96 TAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred HHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 3444444433333 5799999998 77888888887766567777766
No 258
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=40.33 E-value=30 Score=30.57 Aligned_cols=30 Identities=27% Similarity=0.173 Sum_probs=24.0
Q ss_pred cCCcccccccc-----ccCCCceeEeccccccCCCC
Q 021730 255 WGDGVVPEVSA-----HLEGALNISLDGVYHSPVGS 285 (308)
Q Consensus 255 ~~DgiVP~~sA-----~l~ga~~~~~~~~~H~~~~~ 285 (308)
..|.++|.+.. .+++++.+.++ ++|+++..
T Consensus 220 ~~D~~ip~~~~~~m~~~~~~~~~~~l~-~gH~p~ls 254 (273)
T PLN02211 220 LHDHVVKPEQQEAMIKRWPPSQVYELE-SDHSPFFS 254 (273)
T ss_pred CCCCCCCHHHHHHHHHhCCccEEEEEC-CCCCcccc
Confidence 56899997544 47888888897 79999985
No 259
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=39.49 E-value=12 Score=32.12 Aligned_cols=21 Identities=14% Similarity=0.135 Sum_probs=17.9
Q ss_pred ccCCCceeEeccccccCCCCC
Q 021730 266 HLEGALNISLDGVYHSPVGSD 286 (308)
Q Consensus 266 ~l~ga~~~~~~~~~H~~~~~~ 286 (308)
.+++++.+.+++++|..+..+
T Consensus 255 ~~~~~~~~~~~~~gH~~~~e~ 275 (288)
T TIGR01250 255 LIAGSRLVVFPDGSHMTMIED 275 (288)
T ss_pred hccCCeEEEeCCCCCCcccCC
Confidence 368888999999999999864
No 260
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=39.43 E-value=12 Score=31.75 Aligned_cols=42 Identities=12% Similarity=-0.004 Sum_probs=26.4
Q ss_pred CCccccccccccCCCceeEeccccccCCCCCCCCCCCcCChHHHHHHH
Q 021730 256 GDGVVPEVSAHLEGALNISLDGVYHSPVGSDDALRPWYGSPAVVEKWI 303 (308)
Q Consensus 256 ~DgiVP~~sA~l~ga~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~ 303 (308)
.|.++.. .+...+++.+.+++++|.++.++++. ..+.|.+|+
T Consensus 198 ~D~~~~~-~~~~~~~~~~~i~~~gH~~~~e~p~~-----~~~~i~~fl 239 (242)
T PRK11126 198 RDSKFQA-LAQQLALPLHVIPNAGHNAHRENPAA-----FAASLAQIL 239 (242)
T ss_pred CcchHHH-HHHHhcCeEEEeCCCCCchhhhChHH-----HHHHHHHHH
Confidence 3555442 23334789999999999999875432 234455554
No 261
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=38.42 E-value=27 Score=28.97 Aligned_cols=33 Identities=15% Similarity=0.130 Sum_probs=24.6
Q ss_pred CCcEEEeCC---CCCCchhHHHHHHHHHhCCCcEEE
Q 021730 28 CRPAVILPG---LGNNSGDYQRLQLTLKDYGVPTVV 60 (308)
Q Consensus 28 ~~pvvlvHG---~~~~~~~~~~l~~~L~~~G~~v~~ 60 (308)
...||++|. ...+......++..|+++||..+.
T Consensus 151 ~g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vt 186 (191)
T TIGR02764 151 PGDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVT 186 (191)
T ss_pred CCCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEE
Confidence 346999993 223455677899999999998765
No 262
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=37.20 E-value=9.8 Score=31.13 Aligned_cols=39 Identities=28% Similarity=0.229 Sum_probs=28.6
Q ss_pred cCCcccccccc-----ccCCCceeEeccccccCCCCCCCCCCCcCChHHHHHH
Q 021730 255 WGDGVVPEVSA-----HLEGALNISLDGVYHSPVGSDDALRPWYGSPAVVEKW 302 (308)
Q Consensus 255 ~~DgiVP~~sA-----~l~ga~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~ 302 (308)
..|.++|.... .+++++.+++++++|..+.. .|+.+.+|
T Consensus 185 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---------~p~~~~~a 228 (228)
T PF12697_consen 185 EDDPIVPPESAEELADKLPNAELVVIPGAGHFLFLE---------QPDEVAEA 228 (228)
T ss_dssp TTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHHHH---------SHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccHHH---------CHHHHhcC
Confidence 56888885444 47889999999999997753 45665554
No 263
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=36.67 E-value=60 Score=26.75 Aligned_cols=54 Identities=19% Similarity=0.253 Sum_probs=35.4
Q ss_pred HHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHhCCCCeEEEEEEChH
Q 021730 50 TLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEFTPGGKLSLIGHSAG 122 (308)
Q Consensus 50 ~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~v~lvGHSmG 122 (308)
.|.+.|+..+++|.... +. .+..+.....+.+.++++++.++.++|.||--|.|
T Consensus 35 ~Lk~~Gik~li~DkDNT------------------L~-~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 35 HLKKKGIKALIFDKDNT------------------LT-PPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhhcCceEEEEcCCCC------------------CC-CCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 48899999888663211 00 01111223557777788887777779999999986
No 264
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=36.34 E-value=3.5e+02 Score=25.07 Aligned_cols=60 Identities=15% Similarity=0.156 Sum_probs=39.4
Q ss_pred cHHHHHHHHHHHHHHHHHhCC---CCeEEEEEEChHHHHHHHHHHH---hC------CCCccEEEEecCCCCC
Q 021730 90 VLDWYFSRMNDAIQKAKEFTP---GGKLSLIGHSAGGWLARVYMEE---FG------SSDISLLLTLGTPHLP 150 (308)
Q Consensus 90 ~~~~~~~~l~~~i~~l~~~~~---~~~v~lvGHSmGG~va~~~~~~---~~------~~~v~~lv~lgtP~~~ 150 (308)
..+...+++.+.|+....+++ ..++.|.|-|.||.-+-.++.. .. .-+++++ .||.|...
T Consensus 111 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi-~IGng~~d 182 (415)
T PF00450_consen 111 NDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGI-AIGNGWID 182 (415)
T ss_dssp SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEE-EEESE-SB
T ss_pred hhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccc-eecCcccc
Confidence 356667888888888776665 3599999999999765544432 22 2235565 57777744
No 265
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=35.59 E-value=45 Score=29.70 Aligned_cols=33 Identities=9% Similarity=0.126 Sum_probs=27.8
Q ss_pred CCcEEEeCCCCCCchhHHHHHHHHHhCCCcEEE
Q 021730 28 CRPAVILPGLGNNSGDYQRLQLTLKDYGVPTVV 60 (308)
Q Consensus 28 ~~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~ 60 (308)
...||++|-...+......+++.|+++||..+.
T Consensus 230 ~G~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvt 262 (268)
T TIGR02873 230 PGAMVLMHPTASSTEGLEEMITIIKEKGYKIGT 262 (268)
T ss_pred CCcEEEEcCCccHHHHHHHHHHHHHHCCCEEEe
Confidence 357899998777778888999999999999765
No 266
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=35.29 E-value=1.2e+02 Score=27.75 Aligned_cols=31 Identities=13% Similarity=0.142 Sum_probs=22.4
Q ss_pred CCCcEEEeCCCCCCchhHH--HHHHHHHhCCCc
Q 021730 27 QCRPAVILPGLGNNSGDYQ--RLQLTLKDYGVP 57 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~~~--~l~~~L~~~G~~ 57 (308)
.||-++=+||+.++...|. -+++.+-+.|-.
T Consensus 108 ~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~Gl~ 140 (344)
T KOG2170|consen 108 RKPLVLSFHGWTGTGKNYVAEIIAENLYRGGLR 140 (344)
T ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHHhcccc
Confidence 4455555699999999997 467777666643
No 267
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=34.13 E-value=2.5e+02 Score=26.15 Aligned_cols=108 Identities=12% Similarity=-0.014 Sum_probs=58.5
Q ss_pred CCCcEEEeCCCCCCchhH-HHHHHHHHhCCCcEEEEeeccc--ccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHH
Q 021730 27 QCRPAVILPGLGNNSGDY-QRLQLTLKDYGVPTVVAEVSRF--DWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQ 103 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~~-~~l~~~L~~~G~~v~~~~~~~~--d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 103 (308)
...|||++=||.+....+ .......++.||.++....+-. .|.. +. ..... ...-+.+.
T Consensus 37 s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~-------------s~-~~~sl----~~~~~~l~ 98 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSA-------------SR-RILSL----SLASTRLS 98 (350)
T ss_pred ccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCccccccccc-------------cc-ccchh----hHHHHHHH
Confidence 343677776777665554 3666677788998876543322 1111 00 01111 12223333
Q ss_pred HHHHhCC--CCeEEEEEEChHHHHHHHHH-HH--hC-C---CCccEEEEecCCCCCCC
Q 021730 104 KAKEFTP--GGKLSLIGHSAGGWLARVYM-EE--FG-S---SDISLLLTLGTPHLPPP 152 (308)
Q Consensus 104 ~l~~~~~--~~~v~lvGHSmGG~va~~~~-~~--~~-~---~~v~~lv~lgtP~~~~~ 152 (308)
++...+. ..++++--.||||....... .+ .. + ....++++...|.....
T Consensus 99 ~L~~~~~~~~~pi~fh~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~ 156 (350)
T KOG2521|consen 99 ELLSDYNSDPCPIIFHVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSP 156 (350)
T ss_pred HHhhhccCCcCceEEEEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccch
Confidence 3333232 45788889999998766554 21 11 1 23566888888887543
No 268
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=33.63 E-value=62 Score=31.39 Aligned_cols=48 Identities=23% Similarity=0.343 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhCC--CCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCC
Q 021730 97 RMNDAIQKAKEFTP--GGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPH 148 (308)
Q Consensus 97 ~l~~~i~~l~~~~~--~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~ 148 (308)
.+.+.|++.++..+ ...++|-|-|||..-|+.|.++..+. .|.+|=|.
T Consensus 340 ~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~P~----AIiVgKPL 389 (511)
T TIGR03712 340 GIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLSPH----AIIVGKPL 389 (511)
T ss_pred HHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCCCc----eEEEcCcc
Confidence 34444444444433 36899999999999999999876442 44566665
No 269
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=33.62 E-value=65 Score=30.64 Aligned_cols=58 Identities=24% Similarity=0.218 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEEEChHHHHHHHHHHHhCCCCccEEEEecCCCCC
Q 021730 91 LDWYFSRMNDAIQKAKEFTPGGKLSLIGHSAGGWLARVYMEEFGSSDISLLLTLGTPHLP 150 (308)
Q Consensus 91 ~~~~~~~l~~~i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~v~~lv~lgtP~~~ 150 (308)
+.+...|..++++.++.-++. +-+--|-|-||+.+..|=.-||. -|...|.--.|++-
T Consensus 114 i~QAA~D~Hri~~A~K~iY~~-kWISTG~SKGGmTa~y~rrFyP~-DVD~tVaYVAP~~~ 171 (448)
T PF05576_consen 114 IWQAASDQHRIVQAFKPIYPG-KWISTGGSKGGMTAVYYRRFYPD-DVDGTVAYVAPNDV 171 (448)
T ss_pred HhHhhHHHHHHHHHHHhhccC-CceecCcCCCceeEEEEeeeCCC-CCCeeeeeeccccc
Confidence 555678899999999887754 78889999999999988766776 59999988889863
No 270
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=33.02 E-value=96 Score=26.39 Aligned_cols=31 Identities=26% Similarity=0.187 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEEChHHHH
Q 021730 95 FSRMNDAIQKAKEFTPGGKLSLIGHSAGGWL 125 (308)
Q Consensus 95 ~~~l~~~i~~l~~~~~~~~v~lvGHSmGG~v 125 (308)
.+.+.+.|++..+....-..+++-|||||..
T Consensus 107 ~~~~~~~ir~~~e~~d~~~~~~i~~slgGGT 137 (216)
T PF00091_consen 107 LEEILEQIRKEIEKCDSLDGFFIVHSLGGGT 137 (216)
T ss_dssp HHHHHHHHHHHHHTSTTESEEEEEEESSSSH
T ss_pred ccccccccchhhccccccccceeccccccee
Confidence 3444555555554445668899999999864
No 271
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=32.70 E-value=2.5e+02 Score=22.27 Aligned_cols=73 Identities=16% Similarity=0.141 Sum_probs=41.1
Q ss_pred CCcEEEeCCCCCCchhH--HHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHH
Q 021730 28 CRPAVILPGLGNNSGDY--QRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKA 105 (308)
Q Consensus 28 ~~pvvlvHG~~~~~~~~--~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 105 (308)
...-|+..|.++..... ..+...+.....+++.+.+..+|-.. ....+.+.+.+.+.++.+
T Consensus 22 ~~~~v~n~g~~G~t~~~~~~~~~~~~~~~~pd~v~i~~G~ND~~~-----------------~~~~~~~~~~~~~l~~~~ 84 (174)
T cd01841 22 KGKTVNNLGIAGISSRQYLEHIEPQLIQKNPSKVFLFLGTNDIGK-----------------EVSSNQFIKWYRDIIEQI 84 (174)
T ss_pred CCCeEEecccccccHHHHHHHHHHHHHhcCCCEEEEEeccccCCC-----------------CCCHHHHHHHHHHHHHHH
Confidence 34566778888765432 24435555566777776655555211 013455667777777777
Q ss_pred HHhCCCCeEEEE
Q 021730 106 KEFTPGGKLSLI 117 (308)
Q Consensus 106 ~~~~~~~~v~lv 117 (308)
++..+..+++++
T Consensus 85 ~~~~p~~~vi~~ 96 (174)
T cd01841 85 REEFPNTKIYLL 96 (174)
T ss_pred HHHCCCCEEEEE
Confidence 654444444444
No 272
>PRK03482 phosphoglycerate mutase; Provisional
Probab=32.18 E-value=1.4e+02 Score=25.15 Aligned_cols=31 Identities=23% Similarity=0.390 Sum_probs=21.7
Q ss_pred cHHHHHHHHHHHHHHHHHhCCCCeEEEEEEC
Q 021730 90 VLDWYFSRMNDAIQKAKEFTPGGKLSLIGHS 120 (308)
Q Consensus 90 ~~~~~~~~l~~~i~~l~~~~~~~~v~lvGHS 120 (308)
......+.+...++.+......+++.+|+|.
T Consensus 121 s~~~~~~Rv~~~l~~~~~~~~~~~vliVsHg 151 (215)
T PRK03482 121 SMQELSDRMHAALESCLELPQGSRPLLVSHG 151 (215)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCeEEEEeCc
Confidence 4555566677777777655556789999994
No 273
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=32.15 E-value=26 Score=30.72 Aligned_cols=31 Identities=16% Similarity=0.114 Sum_probs=24.2
Q ss_pred cCCcccccccc-----ccCCCceeEeccccccCCCCC
Q 021730 255 WGDGVVPEVSA-----HLEGALNISLDGVYHSPVGSD 286 (308)
Q Consensus 255 ~~DgiVP~~sA-----~l~ga~~~~~~~~~H~~~~~~ 286 (308)
..|.++|...+ .+++++.+++++ +|.++.++
T Consensus 216 ~~D~~v~~~~~~~l~~~~~~~~~~~i~~-gH~~~~e~ 251 (276)
T TIGR02240 216 DDDPIIPLINMRLLAWRIPNAELHIIDD-GHLFLITR 251 (276)
T ss_pred CCCCcCCHHHHHHHHHhCCCCEEEEEcC-CCchhhcc
Confidence 56889987654 478889888986 99988754
No 274
>COG0400 Predicted esterase [General function prediction only]
Probab=31.69 E-value=1.7e+02 Score=24.95 Aligned_cols=38 Identities=16% Similarity=0.098 Sum_probs=29.4
Q ss_pred CCCCCcEEEeCCCCCC---chhHHHHHHHHHhCCCcEEEEe
Q 021730 25 HFQCRPAVILPGLGNN---SGDYQRLQLTLKDYGVPTVVAE 62 (308)
Q Consensus 25 ~~~~~pvvlvHG~~~~---~~~~~~l~~~L~~~G~~v~~~~ 62 (308)
.-.+.||+++||-... ...-..+.+.|.+.|.+|..-.
T Consensus 143 ~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~ 183 (207)
T COG0400 143 DLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRW 183 (207)
T ss_pred ccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEE
Confidence 4577899999998764 3445588999999999987643
No 275
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=31.48 E-value=52 Score=28.28 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=26.2
Q ss_pred CCcEEEeCCC-CCCchhHHHHHHHHHhCCCcEEE
Q 021730 28 CRPAVILPGL-GNNSGDYQRLQLTLKDYGVPTVV 60 (308)
Q Consensus 28 ~~pvvlvHG~-~~~~~~~~~l~~~L~~~G~~v~~ 60 (308)
...||++|.. ..+......++..|+++||..+.
T Consensus 186 ~g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvt 219 (224)
T TIGR02884 186 PGAILLLHAVSKDNAEALDKIIKDLKEQGYTFKS 219 (224)
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEE
Confidence 4579999974 34566788999999999999765
No 276
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=31.28 E-value=32 Score=33.06 Aligned_cols=42 Identities=29% Similarity=0.317 Sum_probs=29.3
Q ss_pred cCCccccccccccCCC---ceeEeccccccCCCCCCCCCCCcCChHHHHHHHHHh
Q 021730 255 WGDGVVPEVSAHLEGA---LNISLDGVYHSPVGSDDALRPWYGSPAVVEKWIHHL 306 (308)
Q Consensus 255 ~~DgiVP~~sA~l~ga---~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (308)
.|||.||.+|+...+. ..+.++ +.|..|.. ++++++.-.++|
T Consensus 375 dGDGTV~~~S~~~~~~~~~~~~~l~-~~H~~il~---------n~~v~~~I~~fL 419 (440)
T PLN02733 375 DGDGTVPVESAKADGLNAVARVGVP-GDHRGILR---------DEHVFRILKHWL 419 (440)
T ss_pred CCCCEEecchhhccCccccccccCC-chHHHHhc---------CHHHHHHHHHHH
Confidence 5899999999987664 234444 78998874 566766555544
No 277
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=31.16 E-value=2.8e+02 Score=22.28 Aligned_cols=24 Identities=17% Similarity=0.304 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEE
Q 021730 94 YFSRMNDAIQKAKEFTPGGKLSLI 117 (308)
Q Consensus 94 ~~~~l~~~i~~l~~~~~~~~v~lv 117 (308)
+.+.+...++.+++..+..+++++
T Consensus 76 ~~~~~~~~i~~i~~~~p~~~iil~ 99 (177)
T cd01844 76 VRERLGPLVKGLRETHPDTPILLV 99 (177)
T ss_pred HHHHHHHHHHHHHHHCcCCCEEEE
Confidence 345556666665554443344333
No 278
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=30.81 E-value=1.4e+02 Score=26.54 Aligned_cols=36 Identities=28% Similarity=0.437 Sum_probs=21.5
Q ss_pred CCCcEEEe-CCCCCCc-hhHHHHHHHHHhCCCc-EEEEe
Q 021730 27 QCRPAVIL-PGLGNNS-GDYQRLQLTLKDYGVP-TVVAE 62 (308)
Q Consensus 27 ~~~pvvlv-HG~~~~~-~~~~~l~~~L~~~G~~-v~~~~ 62 (308)
.+.++||+ ||..... ..|..|...|.+.|+. +++..
T Consensus 140 ~~~a~vlmGHGt~h~an~~Y~~l~~~l~~~~~~~v~vgt 178 (262)
T PF06180_consen 140 KDEAVVLMGHGTPHPANAAYSALQAMLKKHGYPNVFVGT 178 (262)
T ss_dssp TTEEEEEEE---SCHHHHHHHHHHHHHHCCT-TTEEEEE
T ss_pred CCCEEEEEeCCCCCCccHHHHHHHHHHHhCCCCeEEEEE
Confidence 45556665 9977544 3577888889988754 77644
No 279
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=29.35 E-value=4.9e+02 Score=24.56 Aligned_cols=32 Identities=25% Similarity=0.283 Sum_probs=22.9
Q ss_pred CcEEEeCCCCCCch---hHHHHHHHHHhCCCcEEE
Q 021730 29 RPAVILPGLGNNSG---DYQRLQLTLKDYGVPTVV 60 (308)
Q Consensus 29 ~pvvlvHG~~~~~~---~~~~l~~~L~~~G~~v~~ 60 (308)
.|+|+++-+...+. ....-+..|.+.|+.++-
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~ 147 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIE 147 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEEC
Confidence 78999998665443 456777778888877653
No 280
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=29.34 E-value=53 Score=35.66 Aligned_cols=29 Identities=17% Similarity=0.164 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEEChHHH
Q 021730 96 SRMNDAIQKAKEFTPGGKLSLIGHSAGGW 124 (308)
Q Consensus 96 ~~l~~~i~~l~~~~~~~~v~lvGHSmGG~ 124 (308)
..+.-++..++...+.++=-|||||.|-+
T Consensus 566 tAiQiaLtDlLs~lgi~PDGIvGHS~GEl 594 (2376)
T KOG1202|consen 566 TAIQIALTDLLSCLGIRPDGIVGHSLGEL 594 (2376)
T ss_pred HHHHHHHHHHHHhcCCCCCcccccccchh
Confidence 34455555666666778889999998854
No 281
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=29.11 E-value=1.9e+02 Score=24.29 Aligned_cols=37 Identities=19% Similarity=0.140 Sum_probs=24.9
Q ss_pred CCCcEEEeCCCCCCchh---HHHHHHHHHhCCCcEEEEee
Q 021730 27 QCRPAVILPGLGNNSGD---YQRLQLTLKDYGVPTVVAEV 63 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~---~~~l~~~L~~~G~~v~~~~~ 63 (308)
.+.||+++||-...--. .....+.|++.|.++....+
T Consensus 154 ~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~ 193 (216)
T PF02230_consen 154 AKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEY 193 (216)
T ss_dssp CTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEE
T ss_pred CCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEc
Confidence 36799999998876433 44788889999887765443
No 282
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=28.91 E-value=3.1e+02 Score=22.13 Aligned_cols=12 Identities=0% Similarity=0.210 Sum_probs=5.0
Q ss_pred HHHHHHHHHHHH
Q 021730 95 FSRMNDAIQKAK 106 (308)
Q Consensus 95 ~~~l~~~i~~l~ 106 (308)
.+.+.+.++.++
T Consensus 90 ~~~l~~li~~i~ 101 (191)
T cd01836 90 RKQLAELVDALR 101 (191)
T ss_pred HHHHHHHHHHHH
Confidence 344444444443
No 283
>PRK10985 putative hydrolase; Provisional
Probab=28.65 E-value=69 Score=29.01 Aligned_cols=50 Identities=8% Similarity=0.046 Sum_probs=33.8
Q ss_pred cCCcccccccc-----ccCCCceeEeccccccCCCCCC--CCCCCcCChHHHHHHHHHh
Q 021730 255 WGDGVVPEVSA-----HLEGALNISLDGVYHSPVGSDD--ALRPWYGSPAVVEKWIHHL 306 (308)
Q Consensus 255 ~~DgiVP~~sA-----~l~ga~~~~~~~~~H~~~~~~~--~~~~~~~~~~~~~~~~~~~ 306 (308)
..|-++|.+.. ..++++.+++++++|..+.... ....|. ++.+-+|+.-.
T Consensus 264 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~--~~~~~~~~~~~ 320 (324)
T PRK10985 264 KDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWL--EQRIPDWLTTY 320 (324)
T ss_pred CCCCCCChhhChHHHHhCCCeEEEECCCCCceeeCCCCCCCCCccH--HHHHHHHHHHh
Confidence 45777776433 3567778889999999987643 223454 77788887643
No 284
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=28.36 E-value=5.1e+02 Score=24.46 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=25.4
Q ss_pred CCCCcEEEeCCCCC-------CchhHHHHHHHHHhCCCcEE
Q 021730 26 FQCRPAVILPGLGN-------NSGDYQRLQLTLKDYGVPTV 59 (308)
Q Consensus 26 ~~~~pvvlvHG~~~-------~~~~~~~l~~~L~~~G~~v~ 59 (308)
.+...||++||=.- +...|..+++-++++|.-.+
T Consensus 169 a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~ 209 (396)
T COG1448 169 APEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPF 209 (396)
T ss_pred CCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeee
Confidence 34556999998554 45679999999999986443
No 285
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=27.62 E-value=3.1e+02 Score=21.72 Aligned_cols=71 Identities=13% Similarity=0.161 Sum_probs=37.5
Q ss_pred EEEeCCCCCCchhH-H-HHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHh
Q 021730 31 AVILPGLGNNSGDY-Q-RLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEF 108 (308)
Q Consensus 31 vvlvHG~~~~~~~~-~-~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~ 108 (308)
-|+-.|.++..... . .+.+.+.....+++.+-+..+|... ....+.+.+.+.+.++.+++.
T Consensus 24 ~v~N~Gi~G~~~~~~~~~~~~~~~~~~p~~vvi~~G~ND~~~-----------------~~~~~~~~~~~~~lv~~i~~~ 86 (171)
T cd04502 24 PVVNRGFGGSTLADCLHYFDRLVLPYQPRRVVLYAGDNDLAS-----------------GRTPEEVLRDFRELVNRIRAK 86 (171)
T ss_pred ceeecCcccchHHHHHHHHHhhhccCCCCEEEEEEecCcccC-----------------CCCHHHHHHHHHHHHHHHHHH
Confidence 35667877764332 1 2333333334566666555554211 012445567777777777665
Q ss_pred CCCCeEEEEE
Q 021730 109 TPGGKLSLIG 118 (308)
Q Consensus 109 ~~~~~v~lvG 118 (308)
.+..++++++
T Consensus 87 ~~~~~iil~~ 96 (171)
T cd04502 87 LPDTPIAIIS 96 (171)
T ss_pred CCCCcEEEEE
Confidence 5555555554
No 286
>PRK12467 peptide synthase; Provisional
Probab=27.59 E-value=2.1e+02 Score=35.74 Aligned_cols=97 Identities=20% Similarity=0.162 Sum_probs=56.9
Q ss_pred CcEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHh
Q 021730 29 RPAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEF 108 (308)
Q Consensus 29 ~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~ 108 (308)
+.++..|...++...+..+...|... ..++.+...... .+.+ ....+........+.+...
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~~~-~~~~~l~~~~~~----------~d~~-----~~~~~~~~~~~y~~~~~~~--- 3753 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILEGD-RHVLGLTCRHLL----------DDGW-----QDTSLQAMAVQYADYILWQ--- 3753 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhCCC-CcEEEEeccccc----------cccC-----CccchHHHHHHHHHHHHHh---
Confidence 45899999999888888888888553 455554322111 0000 0122333333344444333
Q ss_pred CCCCeEEEEEEChHHHHHHHHHHHh--CCCCccEEEEe
Q 021730 109 TPGGKLSLIGHSAGGWLARVYMEEF--GSSDISLLLTL 144 (308)
Q Consensus 109 ~~~~~v~lvGHSmGG~va~~~~~~~--~~~~v~~lv~l 144 (308)
.+..+..+.|+|+||.++..++... ....+.-+.++
T Consensus 3754 ~~~~p~~l~g~s~g~~~a~~~~~~l~~~g~~~~~~~~~ 3791 (3956)
T PRK12467 3754 QAKGPYGLLGWSLGGTLARLVAELLEREGESEAFLGLF 3791 (3956)
T ss_pred ccCCCeeeeeeecchHHHHHHHHHHHHcCCceeEEEEE
Confidence 4456899999999999998876642 22345544444
No 287
>PRK10749 lysophospholipase L2; Provisional
Probab=27.05 E-value=31 Score=31.41 Aligned_cols=33 Identities=24% Similarity=0.298 Sum_probs=24.4
Q ss_pred cCCcccccccc-----cc-------CCCceeEeccccccCCCCCC
Q 021730 255 WGDGVVPEVSA-----HL-------EGALNISLDGVYHSPVGSDD 287 (308)
Q Consensus 255 ~~DgiVP~~sA-----~l-------~ga~~~~~~~~~H~~~~~~~ 287 (308)
..|.+||.+.+ .+ ++++.+++++++|.++.+.+
T Consensus 268 ~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~ 312 (330)
T PRK10749 268 EEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKD 312 (330)
T ss_pred CCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCc
Confidence 56899998553 22 45578999999999997543
No 288
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=26.86 E-value=1.1e+02 Score=27.41 Aligned_cols=37 Identities=30% Similarity=0.539 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHhC-CCCeEEEEEEChHHHHHHHHHHH
Q 021730 96 SRMNDAIQKAKEFT-PGGKLSLIGHSAGGWLARVYMEE 132 (308)
Q Consensus 96 ~~l~~~i~~l~~~~-~~~~v~lvGHSmGG~va~~~~~~ 132 (308)
+.+..+...+.+.+ +..+|.++|.|=|+..++.++..
T Consensus 75 ~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 75 ARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 45555566664443 45789999999999999998864
No 289
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=26.44 E-value=90 Score=30.87 Aligned_cols=26 Identities=12% Similarity=-0.153 Sum_probs=21.5
Q ss_pred HhCCCCeEEEEEEChHHHHHHHHHHH
Q 021730 107 EFTPGGKLSLIGHSAGGWLARVYMEE 132 (308)
Q Consensus 107 ~~~~~~~v~lvGHSmGG~va~~~~~~ 132 (308)
+..+.++-.++|||+|=..+...+.-
T Consensus 260 ~~~GI~Pdav~GHSlGE~aAa~aAGv 285 (538)
T TIGR02816 260 DEFAIKPDFALGYSKGEASMWASLGV 285 (538)
T ss_pred HhcCCCCCEEeecCHHHHHHHHHhCC
Confidence 45778899999999999888887653
No 290
>PF03283 PAE: Pectinacetylesterase
Probab=26.31 E-value=99 Score=28.86 Aligned_cols=35 Identities=20% Similarity=0.191 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHh-C-CCCeEEEEEEChHHHHHHHHHH
Q 021730 97 RMNDAIQKAKEF-T-PGGKLSLIGHSAGGWLARVYME 131 (308)
Q Consensus 97 ~l~~~i~~l~~~-~-~~~~v~lvGHSmGG~va~~~~~ 131 (308)
-++++|+.+... . ..++|+|-|.|.||+-+...+.
T Consensus 139 i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d 175 (361)
T PF03283_consen 139 ILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHAD 175 (361)
T ss_pred HHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHH
Confidence 355666666654 2 2479999999999988776554
No 291
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=25.99 E-value=93 Score=28.88 Aligned_cols=32 Identities=16% Similarity=0.167 Sum_probs=25.4
Q ss_pred EEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeec
Q 021730 31 AVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVS 64 (308)
Q Consensus 31 vvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~ 64 (308)
|+|||...- ..|..+++.|.++|+.|.++...
T Consensus 2 il~~~~~~p--~~~~~la~~L~~~G~~v~~~~~~ 33 (396)
T cd03818 2 ILFVHQNFP--GQFRHLAPALAAQGHEVVFLTEP 33 (396)
T ss_pred EEEECCCCc--hhHHHHHHHHHHCCCEEEEEecC
Confidence 789987553 55889999999999998876433
No 292
>PRK11460 putative hydrolase; Provisional
Probab=25.91 E-value=3.3e+02 Score=23.28 Aligned_cols=35 Identities=14% Similarity=0.055 Sum_probs=25.6
Q ss_pred CCCcEEEeCCCCCCchh---HHHHHHHHHhCCCcEEEE
Q 021730 27 QCRPAVILPGLGNNSGD---YQRLQLTLKDYGVPTVVA 61 (308)
Q Consensus 27 ~~~pvvlvHG~~~~~~~---~~~l~~~L~~~G~~v~~~ 61 (308)
.+.||+++||-....-. -..+.+.|++.|..+...
T Consensus 147 ~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~ 184 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLD 184 (232)
T ss_pred CCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEE
Confidence 46799999998876433 347788888888765543
No 293
>COG3675 Predicted lipase [Lipid metabolism]
Probab=25.26 E-value=35 Score=30.78 Aligned_cols=47 Identities=30% Similarity=0.372 Sum_probs=29.0
Q ss_pred HHHHHHHhCCC-CeEEEEEEChHHHHHHHHHH--HhCCCCccEEE-EecCC
Q 021730 101 AIQKAKEFTPG-GKLSLIGHSAGGWLARVYME--EFGSSDISLLL-TLGTP 147 (308)
Q Consensus 101 ~i~~l~~~~~~-~~v~lvGHSmGG~va~~~~~--~~~~~~v~~lv-~lgtP 147 (308)
..+.+.++.+. -.+.++|||.|+.++..... +..-.+|..++ +.++|
T Consensus 163 q~~~lleeiP~~Yrig~tghS~g~aii~vrGtyfe~k~p~vdnlv~tf~~P 213 (332)
T COG3675 163 QEQTLLEEIPQGYRIGITGHSSGGAIICVRGTYFERKYPRVDNLVVTFGQP 213 (332)
T ss_pred HHHHHHHhcccceEEEEEeecCCccEEEEeccchhcccCCcccceeeccCC
Confidence 34455555555 56799999999988554332 11112465555 88888
No 294
>PRK10279 hypothetical protein; Provisional
Probab=25.05 E-value=1e+02 Score=28.01 Aligned_cols=30 Identities=20% Similarity=0.172 Sum_probs=22.9
Q ss_pred HHHHHHhCCCCeEEEEEEChHHHHHHHHHHH
Q 021730 102 IQKAKEFTPGGKLSLIGHSAGGWLARVYMEE 132 (308)
Q Consensus 102 i~~l~~~~~~~~v~lvGHSmGG~va~~~~~~ 132 (308)
++.+.+ .+...-.++|-|+|++++..|+..
T Consensus 24 L~aL~E-~gi~~d~i~GtS~GAlvga~yA~g 53 (300)
T PRK10279 24 INALKK-VGIEIDIVAGCSIGSLVGAAYACD 53 (300)
T ss_pred HHHHHH-cCCCcCEEEEEcHHHHHHHHHHcC
Confidence 444433 556677899999999999999864
No 295
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=24.77 E-value=1.5e+02 Score=27.15 Aligned_cols=33 Identities=18% Similarity=0.246 Sum_probs=26.2
Q ss_pred EEeCCCCCC-chhHHHHHHHHHhCCCcEEEEeec
Q 021730 32 VILPGLGNN-SGDYQRLQLTLKDYGVPTVVAEVS 64 (308)
Q Consensus 32 vlvHG~~~~-~~~~~~l~~~L~~~G~~v~~~~~~ 64 (308)
|+|.|+... ...++.+.+.+.+.+...+++|+.
T Consensus 2 iYlt~~~a~~~~~~~~~~~~i~~t~lNavVIDvK 35 (316)
T PF13200_consen 2 IYLTAYSAGSPERLDKLLDLIKRTELNAVVIDVK 35 (316)
T ss_pred EEechhhcCCHHHHHHHHHHHHhcCCceEEEEEe
Confidence 456665544 478999999999999999999887
No 296
>PF13378 MR_MLE_C: Enolase C-terminal domain-like; PDB: 3FCP_B 3P0W_D 3VFC_A 3VDG_A 3FJ4_B 3CT2_B 3DGB_A 3V3W_A 3V4B_A 3NO1_E ....
Probab=24.43 E-value=2.9e+02 Score=20.30 Aligned_cols=63 Identities=11% Similarity=0.074 Sum_probs=36.1
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeecccccccccCCCCCcccccccCCCCCcHHHHHHHHHHHHHHHHHhCCCCeEEEEEE
Q 021730 40 NSGDYQRLQLTLKDYGVPTVVAEVSRFDWLRNAAGLVDPNYWRATLRPRPVLDWYFSRMNDAIQKAKEFTPGGKLSLIGH 119 (308)
Q Consensus 40 ~~~~~~~l~~~L~~~G~~v~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~v~lvGH 119 (308)
+..+...+.+.+.....+++.+++.+.+ | + ....+..+.... ..+.++-|
T Consensus 3 ~~~~~~~~~~li~~~a~d~~~~~~~~~G------G----------------i----t~~~~i~~~A~~----~gi~~~~h 52 (111)
T PF13378_consen 3 SLFSLHDFRRLIEAGAVDIVQIDPTRCG------G----------------I----TEALRIAALAEA----HGIPVMPH 52 (111)
T ss_dssp TSSSHHHHHHHHHTTSCSEEEEBHHHHT------S----------------H----HHHHHHHHHHHH----TT-EEEEB
T ss_pred CCCCHHHHHHHHHcCCCCEEEeCchhcC------C----------------H----HHHHHHHHHHHH----hCCCEEec
Confidence 4455667777777777888887755442 1 1 112222222222 35778899
Q ss_pred ChHHHHHHHHHHH
Q 021730 120 SAGGWLARVYMEE 132 (308)
Q Consensus 120 SmGG~va~~~~~~ 132 (308)
||++-++..+...
T Consensus 53 ~~~~~i~~aa~~h 65 (111)
T PF13378_consen 53 SMESGIGLAASLH 65 (111)
T ss_dssp SSSSHHHHHHHHH
T ss_pred CCCCcHHHHHHHH
Confidence 9977776655443
No 297
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=24.41 E-value=50 Score=27.24 Aligned_cols=21 Identities=10% Similarity=-0.043 Sum_probs=17.3
Q ss_pred ccCCCceeEeccccccCCCCC
Q 021730 266 HLEGALNISLDGVYHSPVGSD 286 (308)
Q Consensus 266 ~l~ga~~~~~~~~~H~~~~~~ 286 (308)
.+++++.+++++++|..+..+
T Consensus 218 ~~~~~~~~~~~~~gH~~~~e~ 238 (251)
T TIGR03695 218 LLPNLTLVIIANAGHNIHLEN 238 (251)
T ss_pred cCCCCcEEEEcCCCCCcCccC
Confidence 357788999999999988754
No 298
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=24.37 E-value=17 Score=33.40 Aligned_cols=31 Identities=16% Similarity=-0.056 Sum_probs=23.4
Q ss_pred cCCcccccccc-----ccCCCcee-----EeccccccCCCC
Q 021730 255 WGDGVVPEVSA-----HLEGALNI-----SLDGVYHSPVGS 285 (308)
Q Consensus 255 ~~DgiVP~~sA-----~l~ga~~~-----~~~~~~H~~~~~ 285 (308)
..|.++|...+ .+++++.+ ++++++|.++..
T Consensus 297 ~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~le 337 (351)
T TIGR01392 297 TSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFLV 337 (351)
T ss_pred CCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhhc
Confidence 56888888655 47888765 557899999875
No 299
>cd00286 Tubulin_FtsZ Tubulin/FtsZ: Family includes tubulin alpha-, beta-, gamma-, delta-, and epsilon-tubulins as well as FtsZ, all of which are involved in polymer formation. Tubulin is the major component of microtubules, but also exists as a heterodimer and as a curved oligomer. Microtubules exist in all eukaryotic cells and are responsible for many functions, including cellular transport, cell motility, and mitosis. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria, archaea, and chloroplasts.
Probab=23.92 E-value=2.5e+02 Score=25.54 Aligned_cols=30 Identities=33% Similarity=0.350 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEEChHH
Q 021730 94 YFSRMNDAIQKAKEFTPGGKLSLIGHSAGG 123 (308)
Q Consensus 94 ~~~~l~~~i~~l~~~~~~~~v~lvGHSmGG 123 (308)
..+.+.+.|+...++...-..+++-|||||
T Consensus 71 ~~e~i~~~ir~~~E~cD~~~gf~i~~slgG 100 (328)
T cd00286 71 YQEEILDIIRKEAEECDSLQGFFITHSLGG 100 (328)
T ss_pred HHHHHHHHHHHHHHhCCCccceEEEeecCC
Confidence 445666666666555555678899999987
No 300
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=23.84 E-value=39 Score=29.65 Aligned_cols=19 Identities=21% Similarity=0.139 Sum_probs=14.8
Q ss_pred CCCeEEEEEEChHHHHHHH
Q 021730 110 PGGKLSLIGHSAGGWLARV 128 (308)
Q Consensus 110 ~~~~v~lvGHSmGG~va~~ 128 (308)
....|+++|||+|..-.-.
T Consensus 233 ~i~~I~i~GhSl~~~D~~Y 251 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEVDYPY 251 (270)
T ss_pred CCCEEEEEeCCCchhhHHH
Confidence 3579999999999865443
No 301
>PRK11789 N-acetyl-anhydromuranmyl-L-alanine amidase; Provisional
Probab=23.38 E-value=84 Score=26.36 Aligned_cols=31 Identities=16% Similarity=0.151 Sum_probs=24.8
Q ss_pred cHHHHHHHHHHHHHHHHHhCCCCeEEEEEEC
Q 021730 90 VLDWYFSRMNDAIQKAKEFTPGGKLSLIGHS 120 (308)
Q Consensus 90 ~~~~~~~~l~~~i~~l~~~~~~~~v~lvGHS 120 (308)
..+.+.+.+...++.+.++++..+-.|+|||
T Consensus 127 ~t~aQ~~aL~~L~~~L~~~y~i~~~~IvGH~ 157 (185)
T PRK11789 127 FTDAQYQALAALTRALRAAYPIIAERITGHS 157 (185)
T ss_pred ccHHHHHHHHHHHHHHHHHcCCCHHhEEehh
Confidence 3455678889999999998887667899996
No 302
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=23.35 E-value=1.2e+02 Score=27.52 Aligned_cols=19 Identities=32% Similarity=0.398 Sum_probs=16.4
Q ss_pred EEEEEChHHHHHHHHHHHh
Q 021730 115 SLIGHSAGGWLARVYMEEF 133 (308)
Q Consensus 115 ~lvGHSmGG~va~~~~~~~ 133 (308)
.+.|-|+||+++..++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 6899999999999988743
No 303
>PHA02114 hypothetical protein
Probab=23.22 E-value=1.1e+02 Score=22.83 Aligned_cols=32 Identities=13% Similarity=0.162 Sum_probs=26.5
Q ss_pred CcEEEeCCCCCCchhHHHHHHHHHhCCCcEEE
Q 021730 29 RPAVILPGLGNNSGDYQRLQLTLKDYGVPTVV 60 (308)
Q Consensus 29 ~pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~ 60 (308)
..||+=--+..+..-|-..+.+|++.||.|+.
T Consensus 83 gtivldvn~amsr~pwi~v~s~le~~g~~vva 114 (127)
T PHA02114 83 GTIVLDVNYAMSRAPWIKVISRLEEAGFNVVA 114 (127)
T ss_pred CeEEEEehhhhccCcHHHHHHHHHhcCceeee
Confidence 56777777788888899999999999998875
No 304
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=23.04 E-value=1.1e+02 Score=27.68 Aligned_cols=24 Identities=25% Similarity=0.284 Sum_probs=19.9
Q ss_pred CCCCeEEEEEEChHHHHHHHHHHH
Q 021730 109 TPGGKLSLIGHSAGGWLARVYMEE 132 (308)
Q Consensus 109 ~~~~~v~lvGHSmGG~va~~~~~~ 132 (308)
.+...=.++|-|+|++++..|+..
T Consensus 40 ~gi~~d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 40 AGIPVDMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred cCCCCCEEEEECHHHHHHHHHHcC
Confidence 455566889999999999999875
No 305
>PRK14457 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=22.96 E-value=3.6e+02 Score=25.03 Aligned_cols=36 Identities=11% Similarity=0.178 Sum_probs=27.7
Q ss_pred cEEEeCCCCCCchhHHHHHHHHHhCCCcEEEEeecc
Q 021730 30 PAVILPGLGNNSGDYQRLQLTLKDYGVPTVVAEVSR 65 (308)
Q Consensus 30 pvvlvHG~~~~~~~~~~l~~~L~~~G~~v~~~~~~~ 65 (308)
-+++|+|+..+...-..+++.+...+..|-.+++..
T Consensus 259 ey~LIpGvNDs~e~a~~La~~l~~l~~~VnLIPynp 294 (345)
T PRK14457 259 EYILLGGVNDLPEHAEELANLLRGFQSHVNLIPYNP 294 (345)
T ss_pred EEEEECCcCCCHHHHHHHHHHHhcCCCeEEEecCCC
Confidence 357899999999999999999977655555555443
No 306
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=22.19 E-value=26 Score=32.68 Aligned_cols=45 Identities=20% Similarity=0.175 Sum_probs=29.6
Q ss_pred cCCcccccccc-----ccCCC----ceeEec-cccccCCCCCCCCCCCcCChHHHHHHHH
Q 021730 255 WGDGVVPEVSA-----HLEGA----LNISLD-GVYHSPVGSDDALRPWYGSPAVVEKWIH 304 (308)
Q Consensus 255 ~~DgiVP~~sA-----~l~ga----~~~~~~-~~~H~~~~~~~~~~~~~~~~~~~~~~~~ 304 (308)
..|.++|...+ .++++ +.++++ +++|.++..+++. ..+.+.+|++
T Consensus 318 ~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~-----~~~~L~~FL~ 372 (379)
T PRK00175 318 TSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDDPR-----YGRLVRAFLE 372 (379)
T ss_pred CCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHH-----HHHHHHHHHH
Confidence 56888887655 47777 567775 8999999865422 2344555554
No 307
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=21.98 E-value=3e+02 Score=22.08 Aligned_cols=32 Identities=9% Similarity=0.344 Sum_probs=24.5
Q ss_pred cHHHHHHHHHHHHHHHHHhCCCCeEEEEEECh
Q 021730 90 VLDWYFSRMNDAIQKAKEFTPGGKLSLIGHSA 121 (308)
Q Consensus 90 ~~~~~~~~l~~~i~~l~~~~~~~~v~lvGHSm 121 (308)
..+...+.+...++.+..+.+.++|.+|+|..
T Consensus 116 s~~~~~~R~~~~~~~l~~~~~~~~vlvVsHg~ 147 (177)
T TIGR03162 116 SFADFYQRVSEFLEELLKAHEGDNVLIVTHGG 147 (177)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCeEEEEECHH
Confidence 45556678888888887766678899999973
No 308
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=21.35 E-value=95 Score=29.19 Aligned_cols=31 Identities=13% Similarity=-0.139 Sum_probs=23.4
Q ss_pred CCcccccccc----ccCCCceeEeccccccCCCCC
Q 021730 256 GDGVVPEVSA----HLEGALNISLDGVYHSPVGSD 286 (308)
Q Consensus 256 ~DgiVP~~sA----~l~ga~~~~~~~~~H~~~~~~ 286 (308)
.|.++|...+ ...+++.+++++++|.++.+.
T Consensus 335 ~D~~v~~~~~~~~a~~~~a~l~vIp~aGH~~~~E~ 369 (383)
T PLN03084 335 RDRWLNYDGVEDFCKSSQHKLIELPMAGHHVQEDC 369 (383)
T ss_pred CCCCcCHHHHHHHHHhcCCeEEEECCCCCCcchhC
Confidence 4788887543 235788999999999988753
No 309
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=21.28 E-value=3.7e+02 Score=23.90 Aligned_cols=33 Identities=27% Similarity=0.399 Sum_probs=22.5
Q ss_pred cEEEeCCCCCCchhHH--HHHHHHHhCCCcEEEEe
Q 021730 30 PAVILPGLGNNSGDYQ--RLQLTLKDYGVPTVVAE 62 (308)
Q Consensus 30 pvvlvHG~~~~~~~~~--~l~~~L~~~G~~v~~~~ 62 (308)
|+|++=|+.++..+.. .|.+.|.+.++.|..++
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~ 36 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIIS 36 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEc
Confidence 7899999999987754 78888888889887765
No 310
>PRK14338 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=21.26 E-value=6.6e+02 Score=24.15 Aligned_cols=29 Identities=17% Similarity=0.187 Sum_probs=23.1
Q ss_pred EEEeCCCCCCchhHH--HHHHHHHhCCCcEE
Q 021730 31 AVILPGLGNNSGDYQ--RLQLTLKDYGVPTV 59 (308)
Q Consensus 31 vvlvHG~~~~~~~~~--~l~~~L~~~G~~v~ 59 (308)
-+.++-+|+....++ .+...|.+.||.+.
T Consensus 22 ~~~i~t~GC~~N~~dse~~~~~l~~~G~~~~ 52 (459)
T PRK14338 22 RYYVWTVGCQMNVSDSERLEAALQGVGYSPA 52 (459)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHCcCEEC
Confidence 378889998777666 78999999998643
No 311
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=21.25 E-value=1.4e+02 Score=23.11 Aligned_cols=32 Identities=13% Similarity=0.308 Sum_probs=21.8
Q ss_pred cHHHHHHHHHHHHHHHHH-hCCCCeEEEEEECh
Q 021730 90 VLDWYFSRMNDAIQKAKE-FTPGGKLSLIGHSA 121 (308)
Q Consensus 90 ~~~~~~~~l~~~i~~l~~-~~~~~~v~lvGHSm 121 (308)
......+.+...++.+.. ..+.+.+.+|+|..
T Consensus 121 s~~~~~~R~~~~~~~l~~~~~~~~~vliVsHg~ 153 (158)
T PF00300_consen 121 SWEDFQQRVKQFLDELIAYKRPGENVLIVSHGG 153 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSEEEEEE-HH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCCEEEEEecHH
Confidence 344556677777777774 45678999999963
Done!