BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>021734
MVFSNSWILPLKVFFISTGVLSIALFCKSSVPFVMDFSVSRAPVIWSSFVSWLKPPYLYI
IINAIIIIIAASSHLYQNDHVPSTDSTPSDVEYEMKYEQQQMIVVAEEENKATVFEEKSV
VVSGDDAQVEVGNYGDAAPWTPPQRTDSLEILTDFHLLAEEEKPLVSARFGHRKPIKSSP
EDGKKLRVTKPRRHETLENTWKTITEGRAMPLTRHMKKSDTWENHGRQVNVDPLLVKKSE
TFKDRTNFQLPPVNNSPGSAGKLRKEPSLSQDELNRRVEAFIKKFNDEMRLQRQESLRQY
QEMISRGI

High Scoring Gene Products

Symbol, full name Information P value
AT1G61260 protein from Arabidopsis thaliana 2.6e-61
AT1G11210 protein from Arabidopsis thaliana 2.1e-36
AT5G54300 protein from Arabidopsis thaliana 1.0e-29
AT1G11220 protein from Arabidopsis thaliana 2.9e-25
AT4G04990 protein from Arabidopsis thaliana 2.5e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  021734
        (308 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2008445 - symbol:AT1G61260 "AT1G61260" species...   444  2.6e-61   2
TAIR|locus:2202094 - symbol:AT1G11210 "AT1G11210" species...   392  2.1e-36   1
TAIR|locus:2162570 - symbol:AT5G54300 "AT5G54300" species...   329  1.0e-29   1
TAIR|locus:2202079 - symbol:AT1G11220 "AT1G11220" species...   287  2.9e-25   1
TAIR|locus:2138416 - symbol:AT4G04990 "AT4G04990" species...   133  2.5e-06   1


>TAIR|locus:2008445 [details] [associations]
            symbol:AT1G61260 "AT1G61260" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0010200 "response to chitin" evidence=RCA]
            EMBL:CP002684 IPI:IPI00518212 RefSeq:NP_176321.2 UniGene:At.10420
            EnsemblPlants:AT1G61260.1 GeneID:842420 KEGG:ath:AT1G61260
            OMA:QASPRIL InterPro:IPR025520 InterPro:IPR008480 Pfam:PF14364
            Pfam:PF05553 Uniprot:F4HTI9
        Length = 344

 Score = 444 (161.4 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
 Identities = 108/217 (49%), Positives = 146/217 (67%)

Query:    98 EQQQMIVVAEEENKATVFEE-KSVVVSGDDAQVEVGNYGDAAPWTPPQRTDSLEILTDFH 156
             E+++ I+ +    +  + EE KSV++  +   VE     D  P  PP   +S E L    
Sbjct:   149 EEEKKIIDSAATAEDEIEEELKSVIMVENSDLVE----SDVIP--PPMMIES-ENLPPI- 200

Query:   157 LLAEEEKPLVSARFGHRKPIKSSPEDGKKLRVTKPRRHETLENTWKTITEGRAMPLTRHM 216
                  EKPLV++RFGHRK +K+S E G+ LRVTKP+++ETLENTWK ITEG++ PLTR +
Sbjct:   201 -----EKPLVTSRFGHRKLMKASQEGGRALRVTKPKKNETLENTWKMITEGKSTPLTRQL 255

Query:   217 -KKSDTW---ENHGRQVNVDPLLVKKSETFKDRTNF-QLPPVNNSPGSAGKLRKEPSLSQ 271
              ++SDT+   ++ G    V P+  KKS+TF+DRTN+ QL           K+RKEPSLSQ
Sbjct:   256 YRRSDTFGRGDSGGVDGEVKPVY-KKSDTFRDRTNYYQL-------AETAKVRKEPSLSQ 307

Query:   272 DELNRRVEAFIKKFNDEMRLQRQESLRQYQEMISRGI 308
             +ELNRRVEAFIKKFN+EM+LQR ESLRQY+E+ SRG+
Sbjct:   308 EELNRRVEAFIKKFNEEMKLQRMESLRQYKEITSRGV 344

 Score = 201 (75.8 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
 Identities = 37/75 (49%), Positives = 48/75 (64%)

Query:     6 SWILPLKVFFISTGVLSIALFCKSSVPFVMDFSVSRAPVIWSSFVSWLKPPYLYXXXXXX 65
             SW++  K   IS+GV ++AL  K SVP  +DFSVSRAP++WSS +SWLKPPYLY      
Sbjct:     3 SWMMTTKAVLISSGVATVALLLKLSVPVAVDFSVSRAPILWSSLLSWLKPPYLYVVTNGI 62

Query:    66 XXXXXXSSHLYQNDH 80
                   SS  Y++ H
Sbjct:    63 IITIVASSKYYRSHH 77


>TAIR|locus:2202094 [details] [associations]
            symbol:AT1G11210 "AT1G11210" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0006979
            "response to oxidative stress" evidence=IMP] [GO:0009409 "response
            to cold" evidence=RCA] [GO:0009414 "response to water deprivation"
            evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
            evidence=RCA] EMBL:CP002684 GO:GO:0006979 EMBL:AC007259
            InterPro:IPR025520 InterPro:IPR008480 Pfam:PF14364 Pfam:PF05553
            EMBL:AF324987 EMBL:AY049281 EMBL:AY090289 IPI:IPI00539583
            PIR:A86246 RefSeq:NP_563885.1 UniGene:At.11566 STRING:Q9SXA7
            EnsemblPlants:AT1G11210.1 GeneID:837662 KEGG:ath:AT1G11210
            InParanoid:Q9SXA7 OMA:CNDERFA ProtClustDB:CLSN2916998
            Genevestigator:Q9SXA7 Uniprot:Q9SXA7
        Length = 308

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 119/319 (37%), Positives = 167/319 (52%)

Query:     6 SWILPLKVFFISTGVLSIALFCKSSVPFVMDFSVSRAPVIWSSFVSWLKPPYLYXXXXXX 65
             SW   +K   ISTGV++ A+  K  VP  MDFS +  P+I SSF++WLKPPYLY      
Sbjct:     3 SW---MKAVLISTGVVATAMHLKVIVPVAMDFSQN--PIILSSFLTWLKPPYLYVITNVI 57

Query:    66 XXXXXXSSHLYQ-NDHVPSTDSTPSDVEYEMKYEQQQMIVVAEEE-NKATVFEEKSVVVS 123
                   S  +   + HV   D   S    + K++     +V E    + T  ++      
Sbjct:    58 IIVVGVSYRITTVSSHVDGKDYEAS-YSGDNKFQTDHQQIVQEAPLRRRTETKDADFGFI 116

Query:   124 GDDAQV----EVGNYGDAAPWTPPQRTDS-LEILTDFHLLAEEEKPLVSARFGHRKPI-K 177
             G   Q+    EV       P T  +     + +++        EKPLV+AR G +KP+ K
Sbjct:   117 GKVLQIVKEPEVVYEEKERPATVEEEEKKCIIVVSKSENQPPVEKPLVTARIGQKKPVVK 176

Query:   178 SSPEDG---KKLRVTKPRRHETLENTWKTITEGR--AMPLTRHMKKSDTWENHGRQVNVD 232
             ++P +    + LRV KP+R+ETLENTWK I EG    +PLT + K+ DT+   G +    
Sbjct:   177 TTPAERNSMRALRVAKPKRNETLENTWKMIMEGNKSTLPLTSYYKRPDTF-GLGEETKQS 235

Query:   233 PLLVKKSETFKDRTN-FQ-LPPVNNSPGSAGKLRK-EPSLSQDELNRRVEAFIKKFNDEM 289
              +L KKSETF DRTN +Q LPP    P    K++K + S S+DELNR+VEAFIKK NDE 
Sbjct:   236 GVL-KKSETFSDRTNCYQSLPP---PPPPLVKVKKVKVSRSRDELNRKVEAFIKKCNDE- 290

Query:   290 RLQRQESLRQYQEMISRGI 308
                R  S++   E+   G+
Sbjct:   291 ---RFASMKLDNEVARHGL 306


>TAIR|locus:2162570 [details] [associations]
            symbol:AT5G54300 "AT5G54300" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0015824 "proline transport" evidence=RCA]
            EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB010695
            InterPro:IPR025520 InterPro:IPR008480 Pfam:PF14364 Pfam:PF05553
            EMBL:AY099819 EMBL:BT000327 IPI:IPI00527277 RefSeq:NP_200241.1
            UniGene:At.24874 UniGene:At.66770 EnsemblPlants:AT5G54300.1
            GeneID:835518 KEGG:ath:AT5G54300 TAIR:At5g54300 eggNOG:NOG326456
            HOGENOM:HOG000242373 OMA:WKKITEG PhylomeDB:Q9FL70
            ProtClustDB:CLSN2916446 ArrayExpress:Q9FL70 Genevestigator:Q9FL70
            Uniprot:Q9FL70
        Length = 326

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 82/172 (47%), Positives = 102/172 (59%)

Query:   142 PPQRTDSLEILTDFHLLAEEEKPLVSARFGHRKPIKSSPEDGKK---LRVTKP-RRHETL 197
             P  + DS EI    H      KP    RF  +K +KS+ E G K   L VTKP RR +TL
Sbjct:   166 PKLKNDSPEISILKH---STRKP---PRFNQQKSLKSNSEGGNKKTALGVTKPPRRQDTL 219

Query:   198 ENTWKTITEGRAMPLTRHMKKSDTWEN--HGRQVNVDPLLVKKSETFKDRTNFQLPPVNN 255
             E TWK ITEGR+ PLT+H+ KSDTW+   H +    +   + KSE  KD        +N 
Sbjct:   220 ETTWKKITEGRSTPLTKHLTKSDTWQERAHVQSSPENKEKMTKSENLKD--------INT 271

Query:   256 SPGSAGKLRKEPSLSQDELNRRVEAFIKKFNDEMRLQRQESLRQYQEMISRG 307
                    L++EPS  Q+ELNRRVEAFIKKFN+EMRLQR ESL +Y EM++ G
Sbjct:   272 PTEEKTVLKREPSPGQEELNRRVEAFIKKFNEEMRLQRLESLAKYNEMVNGG 323


>TAIR|locus:2202079 [details] [associations]
            symbol:AT1G11220 "AT1G11220" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002684 InterPro:IPR025520 InterPro:IPR008480
            Pfam:PF14364 Pfam:PF05553 IPI:IPI00547733 RefSeq:NP_172588.1
            UniGene:At.42145 EnsemblPlants:AT1G11220.1 GeneID:837663
            KEGG:ath:AT1G11220 OMA:KCKEERL ArrayExpress:F4I7E9 Uniprot:F4I7E9
        Length = 310

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 101/317 (31%), Positives = 157/317 (49%)

Query:     6 SWILPLKVFFISTGVLSIALFCKSSVPFVMDFSVSRAPVIWSSFVSWLKPPYLYXXXXXX 65
             S ++ +K   I+ G+++++LF KSSVP  +DFSVSR P+ WSSF+SWLKPPYL+      
Sbjct:     3 SSMISIKAALITAGIVAVSLFLKSSVPIAVDFSVSRFPIFWSSFLSWLKPPYLFVAINVI 62

Query:    66 XXXXXXSSHLYQNDHVPSTDSTPSDV----EYEM-----KYEQQQMI-------VVAEEE 109
                   SS  YQ+  V   D    ++    EY +     +   ++++        VA  +
Sbjct:    63 ITIIMASSKFYQS--VGEQDGEDDEILLGGEYTIPNVITQAPPRRLVDLDADFDFVATVQ 120

Query:   110 NKATVFEEKSVVVSGDDAQVEVGNYGDAAPWTPPQRTD-SLEILTDFHLLAEEEKPLVSA 168
             +   V E + + V  ++ ++ +    +        R++ +  I+ +   L   EKPLVSA
Sbjct:   121 SPILVAEVEILEVVFEEKEMAISGQTNGGDEFAVMRSELNQPIMEESENLPPAEKPLVSA 180

Query:   169 RFGHRKPIKSSPED-GKKLRVTKPRRHETLENTWKTITEGRAMPLTRHMKKSDTWENHGR 227
             R GHRKPIK+S +   +K +  K  +     N  +T+     M +T    KS     H R
Sbjct:   181 RSGHRKPIKASSKGVNRKKKALKVVK----PNRHETLENTWNM-ITEE-GKSTPLTCHYR 234

Query:   228 QVNVDPLLVK---KSETFKDRTNFQLPPVN-NSPG--SAGKLRKEPSLSQDELNRRVEAF 281
             + ++  L      K    K  T   +     +SP   S  K++KE S S++ELNRRVEAF
Sbjct:   235 KTSMSGLNAGGDVKPVLRKAETFRDVTNYRQSSPTVTSPVKMKKEMSPSREELNRRVEAF 294

Query:   282 IKKFNDEMRLQRQESLR 298
             IKK  +E    R ESL+
Sbjct:   295 IKKCKEE----RLESLK 307


>TAIR|locus:2138416 [details] [associations]
            symbol:AT4G04990 "AT4G04990" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002687
            GenomeReviews:CT486007_GR EMBL:AL161502 EMBL:AF162444
            InterPro:IPR008480 Pfam:PF05553 IPI:IPI00544346 PIR:G85062
            RefSeq:NP_567280.1 UniGene:At.54151 EnsemblPlants:AT4G04990.1
            GeneID:825841 KEGG:ath:AT4G04990 TAIR:At4g04990 eggNOG:NOG284616
            HOGENOM:HOG000153446 InParanoid:Q9S9T8 OMA:RTWIISS
            ProtClustDB:CLSN2917510 Genevestigator:Q9S9T8 Uniprot:Q9S9T8
        Length = 303

 Score = 133 (51.9 bits), Expect = 2.5e-06, P = 2.5e-06
 Identities = 26/40 (65%), Positives = 34/40 (85%)

Query:   262 KLRKEPSLSQDELNRRVEAFIKKFNDEMRLQRQESLRQYQ 301
             KL+KE S+ ++ELN RVEAFI KF DEM+LQR ES+R+Y+
Sbjct:   255 KLKKELSMGREELNSRVEAFITKFKDEMKLQRLESVRRYK 294


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.131   0.384    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      308       296   0.00093  115 3  11 23  0.43    34
                                                     33  0.44    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  225 KB (2123 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  28.56u 0.14s 28.70t   Elapsed:  00:00:01
  Total cpu time:  28.56u 0.14s 28.70t   Elapsed:  00:00:01
  Start:  Fri May 10 09:21:48 2013   End:  Fri May 10 09:21:49 2013

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