BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 021734
         (308 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q607B4|GLMM_METCA Phosphoglucosamine mutase OS=Methylococcus capsulatus (strain ATCC
           33009 / NCIMB 11132 / Bath) GN=glmM PE=3 SV=1
          Length = 447

 Score = 34.7 bits (78), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 4/110 (3%)

Query: 26  FCKSSVPFVMDFSVSRAPVIWSSFVSWLKPPYLYIIINAIIIIIA-ASSHLYQNDHVPST 84
           FCKS++P  M FS  +  V  +   ++   P ++  + A +  +  A   L  ND V +T
Sbjct: 161 FCKSTIPLGMHFSGMKIVVDCAHGSTYHVAPDVFSELRATVSTLGVAPDGLNINDRVGAT 220

Query: 85  DSTPSDVEYEMKYEQQQM-IVVAEEENKATVFEEKSVVVSGDDAQVEVGN 133
           D  P ++   +  E   + I +  + ++  + + +  VV GD+    + N
Sbjct: 221 D--PENLRQTVLEENADLGIALDGDGDRLIMVDHRGEVVDGDELLFVIAN 268


>sp|Q5WEN8|TIG_BACSK Trigger factor OS=Bacillus clausii (strain KSM-K16) GN=tig PE=3
           SV=1
          Length = 434

 Score = 34.3 bits (77), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 14/101 (13%)

Query: 80  HVPSTDSTPSDVEYEMK--YEQQQMIVVAEEENKATVFEEKSVVVSGDDAQVEVGNYGDA 137
            VPSTD T  DVE E+K   EQ   +VV EE            + +GD A ++   Y D 
Sbjct: 127 EVPSTDVTDEDVEAELKKLQEQHAELVVLEE----------GEIANGDTAVIDFAGYVDG 176

Query: 138 APWTPPQRTD-SLEILTDFHLLAEEEKPLVSARFGHRKPIK 177
             +      + SLEI ++  +   EE+ LV  + G  K ++
Sbjct: 177 EAFEGGTAENYSLEIGSNSFIPGFEEQ-LVGLKSGEEKDVE 216


>sp|O43010|NMT_SCHPO Glycylpeptide N-tetradecanoyltransferase OS=Schizosaccharomyces
           pombe (strain 972 / ATCC 24843) GN=nmt1 PE=1 SV=1
          Length = 466

 Score = 33.5 bits (75), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 7/101 (6%)

Query: 186 LRVTKPRRHETLENTWKTI-TEGRAMP----LTRHMKKSDTWENHGRQVNVDPLLVKKSE 240
           L + +  R   LEN W+ + T G  +P    L+R+M +S  W+     +   P  +  +E
Sbjct: 199 LLIKEVTRRCHLENVWQAVYTAGVLLPSPVSLSRYMHRSLNWKKL-YDIGFAPFPLGSTE 257

Query: 241 TFKDRTNFQLPPVNNSPGSAGKLRKEPSLSQDELNRRVEAF 281
             K+   + LPP   +PG      K+    Q  L++ +E F
Sbjct: 258 K-KETAKYHLPPNTQTPGLRPMELKDVPAVQSLLSQYMERF 297


>sp|P52516|VU54_HHV7J Protein U54 OS=Human herpesvirus 7 (strain JI) GN=U54 PE=3 SV=1
          Length = 455

 Score = 31.6 bits (70), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 4/89 (4%)

Query: 60  IIINAIIIIIAASSHLYQNDHVPSTDSTPSDVEYEMKYEQQQMIVVAEEENKATVFEEKS 119
           I+++  I++I AS   Y+N+++ + D+ PSD+ +++ + Q    +V E   +  +  + +
Sbjct: 194 IMLHEKILVIRAS---YENNYLLNPDNFPSDIFFQVNFIQTIPHIVMERNQEPVMTYDGT 250

Query: 120 VVVSGDDAQVEVGNYGDAAPWTPPQRTDS 148
            +  G    +   N  D    T P   DS
Sbjct: 251 CITVGSTKNIN-SNTTDPFSCTFPTFFDS 278


>sp|B2KFW1|ZSC20_MOUSE Zinc finger and SCAN domain-containing protein 20 OS=Mus musculus
           GN=Zscan20 PE=2 SV=2
          Length = 1030

 Score = 31.2 bits (69), Expect = 9.3,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 14/133 (10%)

Query: 83  STDSTPSDVEYEMKYEQQQMI----VVAEEENKATVFEEKSVVVSGDDAQVEV-GNYGD- 136
           + DS P+D  +E+K E++  I    V+ +     + +  K+V    D  +  V GN G+ 
Sbjct: 609 TPDSQPADAGFELKREEEDQISEQDVLGDLPGALSRYTTKAVCQPCDWGEDHVNGNEGEW 668

Query: 137 AAPWTPPQRTDSLEILTDFHLLAEEEKPLVSARFGHRKPIKSSPEDGKKLRVTKPRRHET 196
              W      + LE L D   L   EKP     +G     KS     +K+    P+R  +
Sbjct: 669 RNTWEECSSEEDLEKLIDHQGLYLTEKP-----YGCDTRAKSF---SRKVHFFAPQRTHS 720

Query: 197 LENTWKTITEGRA 209
            E  +K +  G++
Sbjct: 721 SEKPYKCLGSGKS 733


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.131    0.385 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,343,849
Number of Sequences: 539616
Number of extensions: 4827752
Number of successful extensions: 14124
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 14115
Number of HSP's gapped (non-prelim): 26
length of query: 308
length of database: 191,569,459
effective HSP length: 117
effective length of query: 191
effective length of database: 128,434,387
effective search space: 24530967917
effective search space used: 24530967917
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)