Query 021734
Match_columns 308
No_of_seqs 141 out of 255
Neff 3.7
Searched_HMMs 13730
Date Mon Mar 25 08:30:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021734.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021734hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1q2oa_ d.174.1.1 (A:) Nitric 27.6 13 0.00092 34.5 2.2 24 269-292 54-77 (416)
2 d1om4a_ d.174.1.1 (A:) Nitric 22.1 22 0.0016 32.9 2.8 23 269-291 51-73 (418)
3 d3e7ma1 d.174.1.1 (A:77-497) N 19.6 19 0.0014 33.4 1.7 24 269-292 52-75 (421)
4 d1m5ya1 a.223.1.2 (A:25-164,A: 9.6 1.2E+02 0.0089 22.3 3.7 18 267-284 65-82 (173)
5 d1ej5a_ a.68.1.1 (A:) Wiscott- 8.7 1E+02 0.0076 23.2 2.9 23 266-288 32-55 (107)
6 d3dbya1 a.29.13.1 (A:5-125) Un 8.1 85 0.0062 23.7 2.1 21 269-289 30-50 (121)
7 d1e7la1 a.140.4.1 (A:104-157) 8.0 95 0.0069 21.0 2.1 19 272-291 33-51 (54)
8 d3dbya2 a.29.13.1 (A:126-260) 7.4 2.3E+02 0.017 21.4 4.5 23 268-290 27-49 (135)
9 d1q2la2 d.185.1.1 (A:733-960) 7.1 1.9E+02 0.014 22.7 4.0 23 268-290 90-112 (228)
10 d2pcsa1 d.129.3.10 (A:1-147) H 6.4 1.7E+02 0.012 20.1 3.0 16 273-288 128-143 (147)
No 1
>d1q2oa_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=27.63 E-value=13 Score=34.53 Aligned_cols=24 Identities=13% Similarity=0.358 Sum_probs=20.8
Q ss_pred CChhHHhHHHHHHHHHHHHHHHHH
Q 021734 269 LSQDELNRRVEAFIKKFNDEMRLQ 292 (308)
Q Consensus 269 ~~~~evd~rAE~FI~kF~~qlrLQ 292 (308)
-+.|+|-..|++||+.||.+++..
T Consensus 54 ~~~e~ll~eA~~Fi~q~y~e~~~~ 77 (416)
T d1q2oa_ 54 PPAEQLLSQARDFINQYYSSIKRS 77 (416)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CCHHHHHHHHHHHHHHHHHhhCcc
Confidence 357899999999999999998754
No 2
>d1om4a_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=22.07 E-value=22 Score=32.86 Aligned_cols=23 Identities=13% Similarity=0.371 Sum_probs=19.8
Q ss_pred CChhHHhHHHHHHHHHHHHHHHH
Q 021734 269 LSQDELNRRVEAFIKKFNDEMRL 291 (308)
Q Consensus 269 ~~~~evd~rAE~FI~kF~~qlrL 291 (308)
.+.|+|-..|++||..||.+++.
T Consensus 51 ~~~e~ll~~A~~Fi~qyy~e~~~ 73 (418)
T d1om4a_ 51 RTKDQLFPLAKEFLDQYYSSIKR 73 (418)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHhhcc
Confidence 46789999999999999999863
No 3
>d3e7ma1 d.174.1.1 (A:77-497) Nitric oxide (NO) synthase oxygenase domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=19.61 E-value=19 Score=33.38 Aligned_cols=24 Identities=17% Similarity=0.286 Sum_probs=20.2
Q ss_pred CChhHHhHHHHHHHHHHHHHHHHH
Q 021734 269 LSQDELNRRVEAFIKKFNDEMRLQ 292 (308)
Q Consensus 269 ~~~~evd~rAE~FI~kF~~qlrLQ 292 (308)
-+.|||-..|++||..||.+++..
T Consensus 52 ~~~e~ll~eA~~Fi~qyy~e~~~~ 75 (421)
T d3e7ma1 52 TPLEELLPHAIEFINQYYGSFKEA 75 (421)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSSC
T ss_pred CCHHHHHHHHHHHHHHHHHHhccc
Confidence 356899999999999999887643
No 4
>d1m5ya1 a.223.1.2 (A:25-164,A:395-427) Porin chaperone SurA, peptide-binding domain {Escherichia coli [TaxId: 562]}
Probab=9.64 E-value=1.2e+02 Score=22.30 Aligned_cols=18 Identities=17% Similarity=0.434 Sum_probs=12.3
Q ss_pred CCCChhHHhHHHHHHHHH
Q 021734 267 PSLSQDELNRRVEAFIKK 284 (308)
Q Consensus 267 ~~~~~~evd~rAE~FI~k 284 (308)
-..+++|||...+.|..+
T Consensus 65 i~vs~~ev~~~i~~~~~~ 82 (173)
T d1m5ya1 65 VKISDEQLDQAIANIAKQ 82 (173)
T ss_dssp CCCCHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHH
Confidence 446777888887776543
No 5
>d1ej5a_ a.68.1.1 (A:) Wiscott-Aldrich syndrome protein, WASP, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.73 E-value=1e+02 Score=23.15 Aligned_cols=23 Identities=17% Similarity=0.421 Sum_probs=18.5
Q ss_pred CCCCChhHH-hHHHHHHHHHHHHH
Q 021734 266 EPSLSQDEL-NRRVEAFIKKFNDE 288 (308)
Q Consensus 266 e~~~~~~ev-d~rAE~FI~kF~~q 288 (308)
....+.+++ |..+-.||.+|+++
T Consensus 32 ~sGIsk~~lkd~et~~~I~~Fiek 55 (107)
T d1ej5a_ 32 RAGISEAQLTDAETSKLIYDFIED 55 (107)
T ss_dssp HTTCCHHHHSCHHHHHHHHHHHHH
T ss_pred HcCCCHHHhcCHHHHHHHHHHHHH
Confidence 356777888 88889999999864
No 6
>d3dbya1 a.29.13.1 (A:5-125) Uncharacterized protein BCE_G9241_0798 {Bacillus cereus [TaxId: 1396]}
Probab=8.06 E-value=85 Score=23.69 Aligned_cols=21 Identities=14% Similarity=0.336 Sum_probs=14.2
Q ss_pred CChhHHhHHHHHHHHHHHHHH
Q 021734 269 LSQDELNRRVEAFIKKFNDEM 289 (308)
Q Consensus 269 ~~~~evd~rAE~FI~kF~~ql 289 (308)
.++.++-++|++|++.|.+-+
T Consensus 30 p~e~~li~~A~~F~~~Fd~Ll 50 (121)
T d3dbya1 30 PKEKEDIKKATYFVETFTNLL 50 (121)
T ss_dssp TTCHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHH
Confidence 345567777778877777654
No 7
>d1e7la1 a.140.4.1 (A:104-157) Recombination endonuclease VII, C-terminal and dimerization domains {Bacteriophage T4 [TaxId: 10665]}
Probab=7.98 E-value=95 Score=20.95 Aligned_cols=19 Identities=21% Similarity=0.515 Sum_probs=13.4
Q ss_pred hHHhHHHHHHHHHHHHHHHH
Q 021734 272 DELNRRVEAFIKKFNDEMRL 291 (308)
Q Consensus 272 ~evd~rAE~FI~kF~~qlrL 291 (308)
+|=|.+| +.|++|++||+.
T Consensus 33 ne~dtk~-el~~kf~KQ~~K 51 (54)
T d1e7la1 33 NESDTKT-QLIASFKKQLRK 51 (54)
T ss_dssp CTTCCHH-HHHHHHHHHHHH
T ss_pred cchhHHH-HHHHHHHHHHHH
Confidence 3445554 479999999974
No 8
>d3dbya2 a.29.13.1 (A:126-260) Uncharacterized protein BCE_G9241_0798 {Bacillus cereus [TaxId: 1396]}
Probab=7.40 E-value=2.3e+02 Score=21.41 Aligned_cols=23 Identities=26% Similarity=0.426 Sum_probs=18.2
Q ss_pred CCChhHHhHHHHHHHHHHHHHHH
Q 021734 268 SLSQDELNRRVEAFIKKFNDEMR 290 (308)
Q Consensus 268 ~~~~~evd~rAE~FI~kF~~qlr 290 (308)
..++.++-++|++|++.|.+-+.
T Consensus 27 dp~E~~li~~A~~F~~~Fe~Ll~ 49 (135)
T d3dbya2 27 DLVEKRLKEKSEEFTKHFEQFYL 49 (135)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHH
Confidence 34667889999999999987543
No 9
>d1q2la2 d.185.1.1 (A:733-960) Protease III {Escherichia coli [TaxId: 562]}
Probab=7.06 E-value=1.9e+02 Score=22.66 Aligned_cols=23 Identities=22% Similarity=0.255 Sum_probs=18.4
Q ss_pred CCChhHHhHHHHHHHHHHHHHHH
Q 021734 268 SLSQDELNRRVEAFIKKFNDEMR 290 (308)
Q Consensus 268 ~~~~~evd~rAE~FI~kF~~qlr 290 (308)
..+-+++..+.++|+..|.+.+.
T Consensus 90 ~~~~~~l~~~I~~fl~~~~~~l~ 112 (228)
T d1q2la2 90 DKQPSFLWERYKAFFPTAEAKLR 112 (228)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhh
Confidence 34567899999999999987654
No 10
>d2pcsa1 d.129.3.10 (A:1-147) Hypothetical protein GKP20 {Geobacillus kaustophilus [TaxId: 1462]}
Probab=6.37 E-value=1.7e+02 Score=20.05 Aligned_cols=16 Identities=25% Similarity=0.345 Sum_probs=9.5
Q ss_pred HHhHHHHHHHHHHHHH
Q 021734 273 ELNRRVEAFIKKFNDE 288 (308)
Q Consensus 273 evd~rAE~FI~kF~~q 288 (308)
-+++-+++|+++|.+.
T Consensus 128 ~~~~~~~~f~~~~~~~ 143 (147)
T d2pcsa1 128 VAKLLISDFFKKIQKE 143 (147)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4555666666666554
Done!