Query 021739
Match_columns 308
No_of_seqs 230 out of 1949
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 08:35:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021739.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021739hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sgz_A Hydroxyacid oxidase 2; 100.0 9.4E-58 3.2E-62 424.3 28.6 290 1-297 59-349 (352)
2 2nzl_A Hydroxyacid oxidase 1; 100.0 4.4E-54 1.5E-58 407.7 31.5 298 1-298 84-385 (392)
3 1gox_A (S)-2-hydroxy-acid oxid 100.0 1.8E-52 6E-57 395.1 34.5 308 1-308 61-370 (370)
4 2nli_A Lactate oxidase; flavoe 100.0 3.5E-53 1.2E-57 399.0 29.5 292 1-298 70-362 (368)
5 1kbi_A Cytochrome B2, L-LCR; f 100.0 9.6E-50 3.3E-54 389.4 32.3 293 1-300 179-483 (511)
6 1p4c_A L(+)-mandelate dehydrog 100.0 5.6E-49 1.9E-53 372.1 32.0 298 1-301 62-359 (380)
7 3sr7_A Isopentenyl-diphosphate 100.0 9.8E-40 3.3E-44 305.7 25.8 255 1-300 76-358 (365)
8 3vkj_A Isopentenyl-diphosphate 100.0 9.1E-37 3.1E-41 286.5 24.0 255 1-300 49-346 (368)
9 1p0k_A Isopentenyl-diphosphate 100.0 1.9E-36 6.6E-41 283.8 25.2 255 1-300 45-331 (349)
10 1vcf_A Isopentenyl-diphosphate 100.0 2.7E-35 9.3E-40 274.2 22.2 242 1-294 48-329 (332)
11 2qr6_A IMP dehydrogenase/GMP r 100.0 2.2E-31 7.7E-36 253.1 12.1 270 1-297 57-392 (393)
12 1ypf_A GMP reductase; GUAC, pu 100.0 1.1E-29 3.7E-34 236.7 21.1 239 1-298 36-325 (336)
13 3r2g_A Inosine 5'-monophosphat 100.0 8.7E-29 3E-33 230.7 19.7 233 2-293 33-317 (361)
14 2c6q_A GMP reductase 2; TIM ba 100.0 2.6E-27 8.8E-32 221.4 21.0 236 1-295 42-342 (351)
15 1jub_A Dihydroorotate dehydrog 99.9 1.8E-25 6.1E-30 206.0 23.6 241 1-294 2-308 (311)
16 2e6f_A Dihydroorotate dehydrog 99.9 6.8E-26 2.3E-30 209.1 20.6 240 1-294 4-310 (314)
17 1eep_A Inosine 5'-monophosphat 99.9 8.4E-26 2.9E-30 215.4 21.6 149 149-297 177-385 (404)
18 1vhn_A Putative flavin oxidore 99.9 7.8E-27 2.7E-31 215.9 12.5 245 9-298 2-275 (318)
19 3oix_A Putative dihydroorotate 99.9 4.8E-24 1.6E-28 198.4 21.9 240 1-293 38-340 (345)
20 4ef8_A Dihydroorotate dehydrog 99.9 2.4E-24 8.1E-29 201.0 19.1 240 1-294 37-343 (354)
21 3b0p_A TRNA-dihydrouridine syn 99.9 1.7E-23 5.9E-28 195.7 23.3 250 10-303 2-288 (350)
22 1gte_A Dihydropyrimidine dehyd 99.9 2.1E-23 7E-28 219.6 22.3 243 1-292 533-851 (1025)
23 1ep3_A Dihydroorotate dehydrog 99.9 2.7E-23 9.2E-28 191.0 19.1 238 1-294 7-306 (311)
24 3i65_A Dihydroorotate dehydrog 99.9 1.4E-22 5E-27 191.5 19.7 238 1-294 84-411 (415)
25 3zwt_A Dihydroorotate dehydrog 99.9 3.4E-22 1.2E-26 187.5 21.5 238 1-294 50-364 (367)
26 1f76_A Dihydroorotate dehydrog 99.9 5E-22 1.7E-26 184.9 21.1 206 1-254 45-323 (336)
27 1tv5_A Dhodehase, dihydroorota 99.9 4.4E-22 1.5E-26 190.5 20.8 123 164-294 295-439 (443)
28 1ea0_A Glutamate synthase [NAD 99.9 8.6E-22 2.9E-26 207.5 23.6 263 9-296 848-1168(1479)
29 3khj_A Inosine-5-monophosphate 99.9 2.2E-21 7.6E-26 181.7 23.6 231 1-293 34-331 (361)
30 1ofd_A Ferredoxin-dependent gl 99.9 3.7E-21 1.3E-25 203.1 24.6 265 9-298 865-1205(1520)
31 4fo4_A Inosine 5'-monophosphat 99.9 1.9E-20 6.6E-25 175.3 22.2 236 1-293 35-335 (366)
32 3ffs_A Inosine-5-monophosphate 99.9 1E-19 3.4E-24 171.9 23.7 141 153-293 172-370 (400)
33 3tjx_A Dihydroorotate dehydrog 99.8 1.9E-19 6.5E-24 168.6 22.7 243 1-297 37-346 (354)
34 4af0_A Inosine-5'-monophosphat 99.8 2.7E-17 9.1E-22 158.2 24.0 142 152-293 308-523 (556)
35 1jcn_A Inosine monophosphate d 99.8 7.8E-18 2.7E-22 165.0 17.5 140 152-293 282-482 (514)
36 3usb_A Inosine-5'-monophosphat 99.8 7.3E-18 2.5E-22 164.8 16.9 141 153-293 284-481 (511)
37 4avf_A Inosine-5'-monophosphat 99.8 2E-17 6.9E-22 161.0 19.7 141 153-293 257-459 (490)
38 1vrd_A Inosine-5'-monophosphat 99.8 1.7E-17 5.7E-22 161.9 18.3 143 152-294 264-463 (494)
39 1me8_A Inosine-5'-monophosphat 99.8 1E-17 3.4E-22 163.7 16.2 145 152-296 269-476 (503)
40 1z41_A YQJM, probable NADH-dep 99.8 1.7E-16 5.7E-21 147.7 23.5 226 3-255 9-313 (338)
41 2z6i_A Trans-2-enoyl-ACP reduc 99.8 8.4E-17 2.9E-21 149.3 21.2 184 5-258 8-200 (332)
42 2gjl_A Hypothetical protein PA 99.8 2E-16 6.7E-21 146.6 23.4 194 4-263 10-215 (328)
43 4fxs_A Inosine-5'-monophosphat 99.7 2.6E-17 9E-22 160.3 17.9 140 154-293 260-458 (496)
44 3bo9_A Putative nitroalkan dio 99.7 7.8E-16 2.7E-20 142.5 23.5 184 9-260 24-216 (326)
45 3bw2_A 2-nitropropane dioxygen 99.7 3.6E-15 1.2E-19 140.2 23.5 99 154-256 135-244 (369)
46 3gr7_A NADPH dehydrogenase; fl 99.7 7.3E-15 2.5E-19 136.6 23.1 227 3-255 9-313 (340)
47 1zfj_A Inosine monophosphate d 99.7 8.4E-16 2.9E-20 149.7 17.0 145 152-296 260-464 (491)
48 2r14_A Morphinone reductase; H 99.7 2.9E-15 9.8E-20 141.1 19.6 223 3-255 15-334 (377)
49 1vyr_A Pentaerythritol tetrani 99.7 9.7E-15 3.3E-19 137.0 23.1 224 3-255 9-329 (364)
50 2gou_A Oxidoreductase, FMN-bin 99.7 3.2E-15 1.1E-19 140.3 19.6 224 3-255 9-328 (365)
51 2hsa_B 12-oxophytodienoate red 99.6 7.1E-15 2.4E-19 139.5 19.2 224 3-255 22-354 (402)
52 1icp_A OPR1, 12-oxophytodienoa 99.6 3.6E-15 1.2E-19 140.5 15.6 223 3-255 20-336 (376)
53 3hgj_A Chromate reductase; TIM 99.6 9.3E-14 3.2E-18 129.7 23.6 228 2-255 7-324 (349)
54 2cu0_A Inosine-5'-monophosphat 99.6 2.9E-15 1E-19 145.8 10.8 139 154-295 257-455 (486)
55 3kru_A NADH:flavin oxidoreduct 99.6 2.1E-13 7.3E-18 126.7 21.3 217 3-255 8-313 (343)
56 1ps9_A 2,4-dienoyl-COA reducta 99.5 2.1E-13 7.2E-18 137.5 20.0 226 3-255 9-316 (671)
57 3l5a_A NADH/flavin oxidoreduct 99.5 2.3E-13 8E-18 129.6 17.9 153 78-254 172-351 (419)
58 3l5l_A Xenobiotic reductase A; 99.5 7.2E-13 2.5E-17 124.2 19.3 104 150-255 208-331 (363)
59 1o94_A Tmadh, trimethylamine d 99.5 7.6E-13 2.6E-17 134.7 19.8 227 2-255 12-327 (729)
60 3k30_A Histamine dehydrogenase 99.5 4.2E-13 1.4E-17 135.8 17.4 227 3-255 18-330 (690)
61 3gka_A N-ethylmaleimide reduct 99.5 2.8E-12 9.7E-17 119.8 18.8 141 80-255 165-322 (361)
62 4ab4_A Xenobiotic reductase B; 99.5 3.1E-12 1.1E-16 119.6 19.0 96 149-255 202-314 (362)
63 2uva_G Fatty acid synthase bet 99.3 1.4E-11 4.9E-16 135.8 17.1 191 11-262 582-808 (2060)
64 3q58_A N-acetylmannosamine-6-p 99.3 1.1E-10 3.6E-15 102.6 18.5 175 25-254 33-215 (229)
65 3igs_A N-acetylmannosamine-6-p 99.3 2.1E-10 7.3E-15 100.9 20.0 96 154-254 119-215 (232)
66 3nav_A Tryptophan synthase alp 99.3 8.6E-11 3E-15 105.5 17.6 172 73-277 31-267 (271)
67 3vnd_A TSA, tryptophan synthas 99.3 2.1E-10 7.2E-15 102.8 17.9 172 72-276 26-264 (267)
68 1mzh_A Deoxyribose-phosphate a 99.2 1.7E-10 5.7E-15 101.1 15.0 95 152-251 103-206 (225)
69 1xm3_A Thiazole biosynthesis p 99.2 1.3E-09 4.4E-14 97.7 21.0 118 155-278 114-234 (264)
70 1y0e_A Putative N-acetylmannos 99.2 9.4E-10 3.2E-14 95.7 17.4 98 154-254 107-209 (223)
71 3tjl_A NADPH dehydrogenase; OL 99.1 3.2E-10 1.1E-14 107.2 11.2 152 78-255 170-352 (407)
72 3aty_A Tcoye, prostaglandin F2 99.1 1E-09 3.6E-14 103.2 14.7 100 149-255 226-342 (379)
73 1qop_A Tryptophan synthase alp 99.1 2E-09 6.9E-14 96.6 15.6 173 72-277 25-264 (268)
74 1rd5_A Tryptophan synthase alp 99.1 1.8E-08 6E-13 90.0 20.4 170 75-277 31-259 (262)
75 3tha_A Tryptophan synthase alp 99.0 9.6E-10 3.3E-14 97.4 10.4 161 72-268 24-246 (252)
76 1wa3_A 2-keto-3-deoxy-6-phosph 99.0 7.7E-09 2.6E-13 88.8 15.2 87 175-274 113-199 (205)
77 2ekc_A AQ_1548, tryptophan syn 99.0 1.9E-08 6.5E-13 90.0 18.2 165 73-271 28-256 (262)
78 3o07_A Pyridoxine biosynthesis 99.0 1.3E-09 4.3E-14 96.7 10.0 135 80-255 22-235 (291)
79 4a3u_A NCR, NADH\:flavin oxido 99.0 1.2E-08 4.3E-13 95.2 17.3 151 78-255 154-321 (358)
80 1geq_A Tryptophan synthase alp 99.0 2.8E-09 9.5E-14 94.3 11.7 121 152-275 67-245 (248)
81 3tsm_A IGPS, indole-3-glycerol 99.0 3.4E-08 1.2E-12 88.5 17.6 102 154-255 109-255 (272)
82 3qja_A IGPS, indole-3-glycerol 98.9 1.6E-08 5.5E-13 90.8 15.2 50 206-255 199-248 (272)
83 2zbt_A Pyridoxal biosynthesis 98.9 2.3E-09 7.9E-14 97.5 9.7 121 165-294 125-277 (297)
84 2nv1_A Pyridoxal biosynthesis 98.9 1.8E-09 6.1E-14 98.7 8.6 79 206-292 195-275 (305)
85 2uv8_G Fatty acid synthase sub 98.9 1.2E-08 4.2E-13 112.3 15.9 194 3-259 584-812 (2051)
86 1yxy_A Putative N-acetylmannos 98.9 2.1E-08 7.3E-13 87.8 14.6 96 154-254 121-220 (234)
87 2qjg_A Putative aldolase MJ040 98.9 1.5E-08 5.1E-13 90.9 11.7 183 10-255 32-243 (273)
88 1ujp_A Tryptophan synthase alp 98.8 5.8E-08 2E-12 87.2 15.1 148 73-256 27-236 (271)
89 4adt_A Pyridoxine biosynthetic 98.8 6.1E-09 2.1E-13 94.5 8.4 111 164-283 124-266 (297)
90 3zen_D Fatty acid synthase; tr 98.8 9.9E-09 3.4E-13 116.7 11.2 194 5-258 424-655 (3089)
91 4e38_A Keto-hydroxyglutarate-a 98.8 2.2E-08 7.6E-13 87.6 10.3 168 69-253 39-206 (232)
92 2v82_A 2-dehydro-3-deoxy-6-pho 98.8 3E-08 1E-12 85.6 11.0 191 72-280 15-205 (212)
93 1wv2_A Thiazole moeity, thiazo 98.8 1.6E-07 5.4E-12 82.6 14.8 98 153-255 124-222 (265)
94 3ngj_A Deoxyribose-phosphate a 98.7 2E-07 6.9E-12 81.6 14.4 99 148-251 124-231 (239)
95 4a29_A Engineered retro-aldol 98.7 2.2E-07 7.4E-12 81.8 13.7 103 153-255 92-239 (258)
96 2y88_A Phosphoribosyl isomeras 98.7 1.4E-07 4.7E-12 83.0 12.1 77 176-255 152-231 (244)
97 2yw3_A 4-hydroxy-2-oxoglutarat 98.7 1E-07 3.5E-12 82.3 10.8 93 152-254 92-184 (207)
98 3oa3_A Aldolase; structural ge 98.7 8.5E-07 2.9E-11 79.5 16.9 100 149-250 156-264 (288)
99 3tdn_A FLR symmetric alpha-bet 98.7 6.4E-08 2.2E-12 85.5 9.2 46 208-255 190-235 (247)
100 2yzr_A Pyridoxal biosynthesis 98.7 1.9E-07 6.3E-12 85.0 12.1 46 208-255 230-277 (330)
101 1vzw_A Phosphoribosyl isomeras 98.6 2.3E-07 7.9E-12 81.6 11.9 77 176-255 149-228 (244)
102 1vc4_A Indole-3-glycerol phosp 98.6 4.8E-07 1.6E-11 80.4 13.9 101 154-255 95-242 (254)
103 4gbu_A NADPH dehydrogenase 1; 98.6 6.6E-07 2.2E-11 84.7 15.5 149 78-255 174-354 (400)
104 3lab_A Putative KDPG (2-keto-3 98.6 1.4E-07 4.8E-12 81.5 9.2 168 69-253 18-191 (217)
105 1yad_A Regulatory protein TENI 98.6 5E-07 1.7E-11 78.4 12.9 96 154-255 101-198 (221)
106 3r12_A Deoxyribose-phosphate a 98.6 1.9E-06 6.6E-11 76.2 16.0 98 149-251 141-247 (260)
107 3ndo_A Deoxyribose-phosphate a 98.6 2.3E-06 7.7E-11 74.7 15.5 98 149-250 110-220 (231)
108 3f4w_A Putative hexulose 6 pho 98.5 1.4E-06 4.9E-11 74.7 14.1 95 156-255 95-193 (211)
109 3ovp_A Ribulose-phosphate 3-ep 98.5 5.5E-06 1.9E-10 72.4 17.2 159 72-282 13-224 (228)
110 1vhc_A Putative KHG/KDPG aldol 98.5 8E-07 2.7E-11 77.5 11.7 166 72-255 25-191 (224)
111 1h5y_A HISF; histidine biosynt 98.5 6.2E-07 2.1E-11 78.6 11.0 77 176-255 157-233 (253)
112 1pii_A N-(5'phosphoribosyl)ant 98.5 3.5E-07 1.2E-11 87.5 9.8 129 153-291 96-269 (452)
113 1ka9_F Imidazole glycerol phos 98.5 6E-07 2.1E-11 79.2 10.6 77 176-255 155-231 (252)
114 2w6r_A Imidazole glycerol phos 98.5 3.2E-07 1.1E-11 81.7 8.9 77 176-255 159-235 (266)
115 1wbh_A KHG/KDPG aldolase; lyas 98.5 7.7E-07 2.6E-11 77.1 11.0 165 72-254 24-189 (214)
116 1qo2_A Molecule: N-((5-phospho 98.5 4.5E-07 1.6E-11 79.7 9.5 76 177-255 148-229 (241)
117 2p10_A MLL9387 protein; putati 98.5 2.2E-05 7.6E-10 69.8 20.0 197 33-276 40-279 (286)
118 2htm_A Thiazole biosynthesis p 98.4 1.6E-06 5.5E-11 76.5 11.9 80 173-255 132-213 (268)
119 1ub3_A Aldolase protein; schif 98.4 9E-06 3.1E-10 70.5 16.6 97 149-250 101-206 (220)
120 1jvn_A Glutamine, bifunctional 98.4 7.4E-07 2.5E-11 87.8 10.8 77 176-255 455-532 (555)
121 1rpx_A Protein (ribulose-phosp 98.4 4.1E-06 1.4E-10 73.0 14.4 141 69-255 16-213 (230)
122 1thf_D HISF protein; thermophI 98.4 9E-07 3.1E-11 78.1 9.9 77 176-255 154-230 (253)
123 1mxs_A KDPG aldolase; 2-keto-3 98.4 6.6E-07 2.2E-11 78.1 8.7 87 157-254 111-199 (225)
124 2fli_A Ribulose-phosphate 3-ep 98.4 6.5E-06 2.2E-10 71.0 14.8 47 208-255 155-204 (220)
125 3o63_A Probable thiamine-phosp 98.4 1.8E-06 6.1E-11 76.2 11.1 82 173-255 142-225 (243)
126 3jr2_A Hexulose-6-phosphate sy 98.4 2.6E-06 8.8E-11 73.8 12.0 98 156-255 101-200 (218)
127 1i4n_A Indole-3-glycerol phosp 98.4 1.7E-06 5.7E-11 76.6 10.8 102 153-255 89-236 (251)
128 2tps_A Protein (thiamin phosph 98.4 1.9E-06 6.6E-11 74.6 11.1 96 157-255 107-206 (227)
129 1tqj_A Ribulose-phosphate 3-ep 98.3 6.1E-06 2.1E-10 72.1 12.2 138 72-255 13-207 (230)
130 2agk_A 1-(5-phosphoribosyl)-5- 98.3 1.5E-06 5.2E-11 77.5 8.0 74 177-252 162-239 (260)
131 3tdn_A FLR symmetric alpha-bet 98.3 2.1E-06 7.3E-11 75.6 8.9 76 176-254 38-113 (247)
132 1xi3_A Thiamine phosphate pyro 98.3 7.7E-06 2.6E-10 70.1 12.2 79 174-255 116-196 (215)
133 3inp_A D-ribulose-phosphate 3- 98.3 4.9E-05 1.7E-09 67.0 17.2 137 72-254 36-228 (246)
134 1h1y_A D-ribulose-5-phosphate 98.3 0.00014 4.7E-09 63.2 19.7 98 155-255 104-207 (228)
135 1w8s_A FBP aldolase, fructose- 98.2 5.8E-05 2E-09 67.2 16.8 91 155-255 125-237 (263)
136 2f6u_A GGGPS, (S)-3-O-geranylg 98.1 4.3E-05 1.5E-09 66.8 13.3 73 175-255 147-224 (234)
137 1vcv_A Probable deoxyribose-ph 98.1 0.00016 5.4E-09 62.9 16.0 101 149-250 96-221 (226)
138 4gj1_A 1-(5-phosphoribosyl)-5- 98.1 4.3E-05 1.5E-09 67.3 12.6 102 152-255 62-230 (243)
139 1n7k_A Deoxyribose-phosphate a 98.0 7.2E-05 2.5E-09 65.4 12.5 89 154-250 119-222 (234)
140 3kts_A Glycerol uptake operon 98.0 0.00028 9.5E-09 59.6 15.2 140 72-255 37-185 (192)
141 2a4a_A Deoxyribose-phosphate a 98.0 0.00011 3.8E-09 65.7 13.2 88 152-244 142-249 (281)
142 1thf_D HISF protein; thermophI 97.9 4.4E-05 1.5E-09 67.2 10.3 76 176-254 33-108 (253)
143 1ka9_F Imidazole glycerol phos 97.9 4.1E-05 1.4E-09 67.3 10.0 76 176-254 34-109 (252)
144 3glc_A Aldolase LSRF; TIM barr 97.9 0.00053 1.8E-08 61.9 17.1 88 155-255 158-263 (295)
145 3ajx_A 3-hexulose-6-phosphate 97.9 0.00014 4.7E-09 62.0 12.4 76 175-255 115-192 (207)
146 3ctl_A D-allulose-6-phosphate 97.9 0.00036 1.2E-08 60.9 15.2 100 154-254 46-201 (231)
147 1p1x_A Deoxyribose-phosphate a 97.9 0.00014 4.8E-09 64.5 12.6 93 148-244 114-222 (260)
148 3vk5_A MOEO5; TIM barrel, tran 97.9 5.9E-05 2E-09 67.2 9.8 69 180-254 193-261 (286)
149 2y88_A Phosphoribosyl isomeras 97.9 0.00012 4.2E-09 63.9 11.5 75 176-254 34-108 (244)
150 1wv2_A Thiazole moeity, thiazo 97.9 4.2E-05 1.4E-09 67.3 8.3 108 63-194 102-217 (265)
151 1qap_A Quinolinic acid phospho 97.9 0.00012 4.1E-09 66.2 11.7 86 155-252 197-283 (296)
152 2b7n_A Probable nicotinate-nuc 97.8 5E-05 1.7E-09 68.0 8.9 88 154-253 169-261 (273)
153 3exr_A RMPD (hexulose-6-phosph 97.8 0.00026 9E-09 61.3 13.1 96 174-276 122-217 (221)
154 1h5y_A HISF; histidine biosynt 97.8 6.5E-05 2.2E-09 65.5 9.2 77 175-254 35-111 (253)
155 2qr6_A IMP dehydrogenase/GMP r 97.8 7.2E-05 2.4E-09 70.4 10.0 98 149-250 140-240 (393)
156 1qo2_A Molecule: N-((5-phospho 97.8 2.6E-05 8.8E-10 68.3 6.2 75 176-254 33-107 (241)
157 1vzw_A Phosphoribosyl isomeras 97.8 0.00014 4.8E-09 63.6 10.9 75 176-254 35-109 (244)
158 2w6r_A Imidazole glycerol phos 97.7 7E-05 2.4E-09 66.4 7.9 75 176-253 33-107 (266)
159 3vzx_A Heptaprenylglyceryl pho 97.7 0.00035 1.2E-08 60.7 11.8 67 181-255 148-214 (228)
160 1x1o_A Nicotinate-nucleotide p 97.7 0.0004 1.4E-08 62.5 12.0 87 155-253 184-272 (286)
161 2jbm_A Nicotinate-nucleotide p 97.7 9.3E-05 3.2E-09 67.1 7.8 87 155-253 185-276 (299)
162 3s1x_A Probable transaldolase; 97.6 0.0042 1.4E-07 53.6 17.3 186 30-271 9-212 (223)
163 3r8r_A Transaldolase; pentose 97.6 0.0067 2.3E-07 52.0 18.3 172 30-257 9-194 (212)
164 3tqv_A Nicotinate-nucleotide p 97.6 0.00035 1.2E-08 62.7 10.4 87 155-253 187-274 (287)
165 1y0e_A Putative N-acetylmannos 97.6 0.0045 1.5E-07 53.0 17.0 93 155-252 46-149 (223)
166 3ceu_A Thiamine phosphate pyro 97.6 0.00015 5E-09 62.3 7.4 80 173-254 95-177 (210)
167 1q6o_A Humps, 3-keto-L-gulonat 97.6 0.0022 7.5E-08 55.0 14.9 94 157-255 99-197 (216)
168 3cwo_X Beta/alpha-barrel prote 97.6 0.00033 1.1E-08 59.8 9.5 77 176-255 133-209 (237)
169 3q58_A N-acetylmannosamine-6-p 97.5 0.0029 9.8E-08 55.0 15.1 86 154-248 58-155 (229)
170 4eiv_A Deoxyribose-phosphate a 97.5 0.0018 6E-08 58.0 13.4 98 149-254 133-263 (297)
171 3igs_A N-acetylmannosamine-6-p 97.5 0.0034 1.2E-07 54.7 15.1 86 154-248 58-155 (232)
172 3c2e_A Nicotinate-nucleotide p 97.5 9.9E-05 3.4E-09 66.8 5.3 87 154-252 186-280 (294)
173 3paj_A Nicotinate-nucleotide p 97.5 0.00093 3.2E-08 60.7 11.7 86 155-252 220-306 (320)
174 2czd_A Orotidine 5'-phosphate 97.5 0.0017 5.9E-08 55.4 12.8 80 179-275 125-205 (208)
175 2pgw_A Muconate cycloisomerase 97.5 0.0054 1.8E-07 57.3 17.3 121 73-252 146-274 (384)
176 2ovl_A Putative racemase; stru 97.4 0.0016 5.5E-08 60.6 13.1 120 74-251 146-274 (371)
177 1mdl_A Mandelate racemase; iso 97.4 0.0013 4.5E-08 60.9 12.1 120 73-250 143-271 (359)
178 1o4u_A Type II quinolic acid p 97.4 0.00029 9.7E-09 63.3 6.8 87 155-253 181-272 (285)
179 1viz_A PCRB protein homolog; s 97.3 0.00061 2.1E-08 59.7 8.4 73 175-255 140-216 (240)
180 3l0g_A Nicotinate-nucleotide p 97.3 0.0012 4.2E-08 59.3 10.4 86 155-252 196-282 (300)
181 1to3_A Putative aldolase YIHT; 97.3 0.0021 7.1E-08 58.3 12.0 91 158-255 148-260 (304)
182 3nl6_A Thiamine biosynthetic b 97.3 0.002 6.8E-08 63.0 12.4 81 174-255 116-215 (540)
183 1hg3_A Triosephosphate isomera 97.3 0.0019 6.4E-08 56.0 10.6 101 154-255 48-211 (225)
184 3gnn_A Nicotinate-nucleotide p 97.3 0.0011 3.8E-08 59.7 9.3 86 155-252 198-284 (298)
185 1vpx_A Protein (transaldolase 97.2 0.033 1.1E-06 48.3 18.1 115 156-274 105-224 (230)
186 1ypf_A GMP reductase; GUAC, pu 97.2 0.001 3.5E-08 61.2 9.1 132 39-249 44-177 (336)
187 1tqx_A D-ribulose-5-phosphate 97.2 0.0025 8.5E-08 55.4 11.0 113 155-276 102-222 (227)
188 4gj1_A 1-(5-phosphoribosyl)-5- 97.2 0.0014 4.7E-08 57.6 9.5 75 177-254 35-109 (243)
189 3khj_A Inosine-5-monophosphate 97.2 0.0018 6.1E-08 60.2 10.6 89 154-249 84-173 (361)
190 3lab_A Putative KDPG (2-keto-3 97.2 0.0019 6.4E-08 55.6 9.8 83 151-248 49-138 (217)
191 1xg4_A Probable methylisocitra 97.2 0.013 4.3E-07 52.9 15.7 179 30-255 26-241 (295)
192 4e38_A Keto-hydroxyglutarate-a 97.2 0.0018 6E-08 56.4 9.5 81 153-248 72-153 (232)
193 2nql_A AGR_PAT_674P, isomerase 97.2 0.0031 1E-07 59.1 11.8 119 73-250 163-290 (388)
194 2hzg_A Mandelate racemase/muco 97.2 0.011 3.7E-07 55.6 15.4 124 72-251 143-279 (401)
195 1w0m_A TIM, triosephosphate is 97.1 0.0029 1E-07 54.8 10.6 38 218-255 171-208 (226)
196 1rvk_A Isomerase/lactonizing e 97.1 0.0088 3E-07 55.7 14.6 127 73-251 148-284 (382)
197 1qpo_A Quinolinate acid phosph 97.1 0.0017 5.8E-08 58.3 9.2 86 155-252 183-272 (284)
198 2rdx_A Mandelate racemase/muco 97.0 0.0063 2.2E-07 56.7 12.6 116 73-250 144-268 (379)
199 1zfj_A Inosine monophosphate d 97.0 0.055 1.9E-06 52.0 19.7 68 176-249 235-302 (491)
200 3iv3_A Tagatose 1,6-diphosphat 97.0 0.0041 1.4E-07 56.9 10.8 104 179-292 194-316 (332)
201 1nu5_A Chloromuconate cycloiso 97.0 0.013 4.6E-07 54.2 14.4 120 73-250 141-270 (370)
202 2qgy_A Enolase from the enviro 97.0 0.0082 2.8E-07 56.2 12.8 119 73-249 148-275 (391)
203 2h6r_A Triosephosphate isomera 97.0 0.002 6.9E-08 55.6 7.8 97 157-255 104-205 (219)
204 3ve9_A Orotidine-5'-phosphate 97.0 0.0015 5.1E-08 56.3 6.9 86 177-280 119-205 (215)
205 2og9_A Mandelate racemase/muco 96.9 0.0088 3E-07 56.0 12.8 119 74-250 162-289 (393)
206 3ozy_A Putative mandelate race 96.8 0.012 4E-07 55.2 12.5 120 72-250 149-278 (389)
207 3w01_A Heptaprenylglyceryl pho 96.8 0.0043 1.5E-07 54.0 8.8 63 185-255 158-220 (235)
208 1tkk_A Similar to chloromucona 96.8 0.025 8.7E-07 52.2 14.6 120 73-250 139-269 (366)
209 3iwp_A Copper homeostasis prot 96.8 0.015 5.1E-07 51.9 12.3 122 75-249 110-238 (287)
210 4dbe_A Orotidine 5'-phosphate 96.8 0.0036 1.2E-07 54.1 8.1 88 176-281 125-213 (222)
211 1yxy_A Putative N-acetylmannos 96.8 0.038 1.3E-06 47.6 14.7 88 155-246 59-157 (234)
212 2qdd_A Mandelate racemase/muco 96.8 0.054 1.9E-06 50.2 16.6 119 73-252 144-270 (378)
213 2p8b_A Mandelate racemase/muco 96.8 0.0084 2.9E-07 55.6 10.8 121 72-251 139-269 (369)
214 3eez_A Putative mandelate race 96.7 0.021 7.3E-07 53.2 13.5 119 72-252 143-270 (378)
215 2pp0_A L-talarate/galactarate 96.7 0.018 6.1E-07 54.0 12.6 119 74-250 175-302 (398)
216 3cu2_A Ribulose-5-phosphate 3- 96.7 0.0081 2.8E-07 52.4 9.5 68 185-254 147-222 (237)
217 1wbh_A KHG/KDPG aldolase; lyas 96.7 0.0081 2.8E-07 51.6 9.2 80 154-248 55-135 (214)
218 4fo4_A Inosine 5'-monophosphat 96.6 0.011 3.6E-07 55.0 10.4 90 154-249 85-177 (366)
219 1vhc_A Putative KHG/KDPG aldol 96.6 0.0095 3.3E-07 51.5 9.4 80 154-248 56-136 (224)
220 1l6w_A Fructose-6-phosphate al 96.6 0.15 5E-06 43.9 16.8 112 156-271 95-211 (220)
221 1jvn_A Glutamine, bifunctional 96.6 0.0025 8.7E-08 62.5 6.3 76 177-254 284-372 (555)
222 2ps2_A Putative mandelate race 96.6 0.025 8.5E-07 52.4 12.5 117 72-250 144-270 (371)
223 2oz8_A MLL7089 protein; struct 96.6 0.13 4.5E-06 47.9 17.6 118 74-249 145-273 (389)
224 3sjn_A Mandelate racemase/muco 96.5 0.015 5.1E-07 54.1 10.9 120 75-250 147-276 (374)
225 1vkf_A Glycerol uptake operon 96.5 0.0031 1E-07 52.9 5.3 137 72-256 39-184 (188)
226 3i4k_A Muconate lactonizing en 96.5 0.062 2.1E-06 50.0 14.7 87 154-250 181-276 (383)
227 3stp_A Galactonate dehydratase 96.5 0.032 1.1E-06 52.6 12.7 128 73-252 178-314 (412)
228 2qde_A Mandelate racemase/muco 96.5 0.027 9.4E-07 52.7 12.2 119 73-250 144-271 (397)
229 1mxs_A KDPG aldolase; 2-keto-3 96.4 0.0089 3.1E-07 51.7 8.1 111 72-248 34-145 (225)
230 2vc6_A MOSA, dihydrodipicolina 96.4 0.33 1.1E-05 43.3 18.7 179 13-252 7-208 (292)
231 2bdq_A Copper homeostasis prot 96.4 0.059 2E-06 46.3 12.9 125 74-249 74-207 (224)
232 3rcy_A Mandelate racemase/muco 96.4 0.023 7.8E-07 54.0 11.4 132 73-250 145-285 (433)
233 4dwd_A Mandelate racemase/muco 96.4 0.058 2E-06 50.5 14.0 126 73-250 138-272 (393)
234 2agk_A 1-(5-phosphoribosyl)-5- 96.4 0.0055 1.9E-07 54.3 6.5 68 176-254 41-108 (260)
235 2gdq_A YITF; mandelate racemas 96.3 0.027 9.2E-07 52.5 11.3 119 73-249 135-266 (382)
236 1tzz_A Hypothetical protein L1 96.3 0.028 9.6E-07 52.5 11.3 119 74-250 165-296 (392)
237 4e5t_A Mandelate racemase / mu 96.2 0.021 7.3E-07 53.6 10.2 131 74-250 151-290 (404)
238 3jva_A Dipeptide epimerase; en 96.2 0.058 2E-06 49.7 12.9 120 73-251 138-266 (354)
239 1wx0_A Transaldolase; structur 96.2 0.15 5.1E-06 43.9 14.5 101 156-260 102-205 (223)
240 3usb_A Inosine-5'-monophosphat 96.2 0.39 1.3E-05 46.4 19.2 68 176-249 258-325 (511)
241 1vli_A Spore coat polysacchari 96.2 0.79 2.7E-05 42.6 20.3 205 4-244 17-243 (385)
242 3r2g_A Inosine 5'-monophosphat 96.2 0.026 8.9E-07 52.3 10.2 68 176-249 102-169 (361)
243 2yw3_A 4-hydroxy-2-oxoglutarat 96.2 0.034 1.1E-06 47.4 10.1 110 72-248 21-130 (207)
244 1vc4_A Indole-3-glycerol phosp 96.1 0.035 1.2E-06 48.8 10.3 73 176-254 68-140 (254)
245 1eix_A Orotidine 5'-monophosph 96.1 0.022 7.6E-07 49.8 8.9 36 220-255 182-227 (245)
246 1twd_A Copper homeostasis prot 96.0 0.062 2.1E-06 47.1 11.1 122 74-249 71-198 (256)
247 3daq_A DHDPS, dihydrodipicolin 96.0 0.034 1.2E-06 49.9 9.7 92 179-273 29-125 (292)
248 2poz_A Putative dehydratase; o 96.0 0.027 9.1E-07 52.6 9.3 136 73-249 136-280 (392)
249 3tj4_A Mandelate racemase; eno 95.9 0.077 2.6E-06 49.2 12.3 86 154-249 184-278 (372)
250 3rr1_A GALD, putative D-galact 95.9 0.053 1.8E-06 50.9 11.2 128 73-250 124-260 (405)
251 4e4u_A Mandalate racemase/muco 95.9 0.041 1.4E-06 51.9 10.1 131 74-250 144-283 (412)
252 3cpr_A Dihydrodipicolinate syn 95.8 0.059 2E-06 48.7 10.7 92 179-273 43-139 (304)
253 3bjs_A Mandelate racemase/muco 95.8 0.048 1.6E-06 51.6 10.5 118 73-249 183-311 (428)
254 3flu_A DHDPS, dihydrodipicolin 95.8 0.043 1.5E-06 49.3 9.7 92 179-273 34-130 (297)
255 3tak_A DHDPS, dihydrodipicolin 95.8 0.041 1.4E-06 49.4 9.4 92 179-273 28-124 (291)
256 3qze_A DHDPS, dihydrodipicolin 95.8 0.043 1.5E-06 49.8 9.5 92 179-273 50-146 (314)
257 3l21_A DHDPS, dihydrodipicolin 95.7 0.039 1.3E-06 49.8 9.1 90 179-271 42-136 (304)
258 2gl5_A Putative dehydratase pr 95.7 0.078 2.7E-06 49.7 11.6 89 151-249 202-299 (410)
259 2wkj_A N-acetylneuraminate lya 95.7 0.053 1.8E-06 48.9 10.0 93 179-274 38-135 (303)
260 1f6k_A N-acetylneuraminate lya 95.7 0.052 1.8E-06 48.7 9.9 93 179-274 30-128 (293)
261 3go2_A Putative L-alanine-DL-g 95.7 0.12 4.2E-06 48.5 12.8 86 153-250 199-293 (409)
262 3toy_A Mandelate racemase/muco 95.7 0.13 4.4E-06 47.9 12.8 120 73-250 166-295 (383)
263 2yxg_A DHDPS, dihydrodipicolin 95.7 0.052 1.8E-06 48.6 9.8 92 179-273 27-123 (289)
264 1nsj_A PRAI, phosphoribosyl an 95.7 0.42 1.4E-05 40.5 14.9 90 155-253 89-184 (205)
265 1xky_A Dihydrodipicolinate syn 95.7 0.05 1.7E-06 49.0 9.6 90 179-271 39-133 (301)
266 2ehh_A DHDPS, dihydrodipicolin 95.7 0.051 1.8E-06 48.8 9.6 91 179-272 27-122 (294)
267 3si9_A DHDPS, dihydrodipicolin 95.7 0.037 1.3E-06 50.3 8.6 92 179-273 49-145 (315)
268 3tsm_A IGPS, indole-3-glycerol 95.7 0.099 3.4E-06 46.4 11.2 71 177-253 83-153 (272)
269 3nvt_A 3-deoxy-D-arabino-heptu 95.6 0.63 2.2E-05 43.3 17.1 189 12-250 143-347 (385)
270 2r8w_A AGR_C_1641P; APC7498, d 95.6 0.053 1.8E-06 49.6 9.7 92 179-273 61-157 (332)
271 3ugv_A Enolase; enzyme functio 95.6 0.13 4.3E-06 48.1 12.5 88 154-251 206-302 (390)
272 3na8_A Putative dihydrodipicol 95.6 0.041 1.4E-06 50.0 8.8 92 179-273 51-147 (315)
273 3dg3_A Muconate cycloisomerase 95.6 0.21 7.2E-06 46.1 13.9 90 154-253 172-270 (367)
274 2wqp_A Polysialic acid capsule 95.6 0.77 2.6E-05 42.1 17.3 243 4-284 8-273 (349)
275 1sjd_A N-acylamino acid racema 95.6 0.15 5.3E-06 46.9 12.8 115 74-249 141-263 (368)
276 2o56_A Putative mandelate race 95.6 0.092 3.1E-06 49.2 11.4 135 74-249 152-296 (407)
277 2ox4_A Putative mandelate race 95.6 0.055 1.9E-06 50.6 9.9 136 74-250 146-291 (403)
278 3fkr_A L-2-keto-3-deoxyarabona 95.6 0.06 2E-06 48.7 9.6 95 179-273 35-134 (309)
279 3r4e_A Mandelate racemase/muco 95.6 0.069 2.4E-06 50.4 10.4 153 72-250 141-302 (418)
280 3mqt_A Mandelate racemase/muco 95.6 0.11 3.7E-06 48.6 11.7 88 153-250 186-283 (394)
281 2hxt_A L-fuconate dehydratase; 95.6 0.097 3.3E-06 49.6 11.5 118 74-249 198-324 (441)
282 2rfg_A Dihydrodipicolinate syn 95.5 0.051 1.8E-06 48.9 9.0 92 179-273 27-123 (297)
283 2zad_A Muconate cycloisomerase 95.5 0.36 1.2E-05 44.0 14.9 117 73-248 138-264 (345)
284 3q45_A Mandelate racemase/muco 95.5 0.13 4.5E-06 47.5 12.0 119 73-250 139-266 (368)
285 3ddm_A Putative mandelate race 95.5 0.099 3.4E-06 48.8 11.2 86 154-249 186-281 (392)
286 1h1y_A D-ribulose-5-phosphate 95.5 0.22 7.7E-06 42.6 12.7 126 72-251 15-147 (228)
287 2ojp_A DHDPS, dihydrodipicolin 95.5 0.05 1.7E-06 48.8 8.8 90 179-271 28-122 (292)
288 3mkc_A Racemase; metabolic pro 95.5 0.12 4.2E-06 48.2 11.7 88 153-250 191-288 (394)
289 3m5v_A DHDPS, dihydrodipicolin 95.5 0.063 2.2E-06 48.3 9.4 91 179-272 34-130 (301)
290 3b4u_A Dihydrodipicolinate syn 95.5 0.061 2.1E-06 48.3 9.3 94 179-274 30-128 (294)
291 2v82_A 2-dehydro-3-deoxy-6-pho 95.5 0.086 2.9E-06 44.6 9.8 80 154-248 46-127 (212)
292 1chr_A Chloromuconate cycloiso 95.4 0.17 6E-06 46.7 12.5 88 153-250 174-270 (370)
293 1xm3_A Thiazole biosynthesis p 95.4 0.033 1.1E-06 49.2 7.2 42 153-194 166-208 (264)
294 1o5k_A DHDPS, dihydrodipicolin 95.4 0.056 1.9E-06 48.9 8.8 90 179-271 39-133 (306)
295 3sbf_A Mandelate racemase / mu 95.4 0.12 4.2E-06 48.3 11.5 144 72-250 131-283 (401)
296 3kts_A Glycerol uptake operon 95.3 0.23 8E-06 41.6 11.8 41 155-195 140-181 (192)
297 3e96_A Dihydrodipicolinate syn 95.3 0.041 1.4E-06 50.0 7.7 92 179-274 39-135 (316)
298 3ro6_B Putative chloromuconate 95.3 0.11 3.8E-06 47.7 10.8 121 73-252 139-269 (356)
299 2v9d_A YAGE; dihydrodipicolini 95.3 0.062 2.1E-06 49.4 8.9 90 179-271 58-152 (343)
300 3qfe_A Putative dihydrodipicol 95.3 0.082 2.8E-06 48.0 9.5 92 179-271 38-134 (318)
301 3nav_A Tryptophan synthase alp 95.3 0.067 2.3E-06 47.5 8.7 41 154-194 197-238 (271)
302 3qja_A IGPS, indole-3-glycerol 95.3 0.15 5.2E-06 45.2 11.1 71 177-253 76-146 (272)
303 3mwc_A Mandelate racemase/muco 95.2 0.41 1.4E-05 44.7 14.6 87 154-250 192-286 (400)
304 3m47_A Orotidine 5'-phosphate 95.2 0.029 1E-06 48.5 6.2 81 178-276 142-223 (228)
305 3eb2_A Putative dihydrodipicol 95.2 1.6 5.6E-05 39.0 19.9 181 12-252 9-211 (300)
306 2vc6_A MOSA, dihydrodipicolina 95.2 0.055 1.9E-06 48.5 8.0 92 178-272 26-122 (292)
307 1z41_A YQJM, probable NADH-dep 95.2 0.23 7.8E-06 45.4 12.3 90 63-193 210-307 (338)
308 3d0c_A Dihydrodipicolinate syn 95.2 0.055 1.9E-06 49.1 8.0 91 179-273 39-134 (314)
309 2qq6_A Mandelate racemase/muco 95.1 0.15 5.3E-06 47.7 11.3 88 152-249 195-291 (410)
310 3zwt_A Dihydroorotate dehydrog 95.1 0.07 2.4E-06 49.5 8.6 103 64-193 222-327 (367)
311 3s5o_A 4-hydroxy-2-oxoglutarat 95.1 0.1 3.5E-06 47.1 9.4 94 179-273 41-139 (307)
312 3vcn_A Mannonate dehydratase; 95.0 0.25 8.6E-06 46.6 12.5 152 72-250 148-309 (425)
313 3tji_A Mandelate racemase/muco 95.0 0.19 6.4E-06 47.4 11.6 144 72-250 152-304 (422)
314 3gr7_A NADPH dehydrogenase; fl 95.0 0.38 1.3E-05 44.0 13.3 89 64-193 211-307 (340)
315 3dz1_A Dihydrodipicolinate syn 95.0 0.14 4.7E-06 46.4 10.1 91 179-274 35-130 (313)
316 3ajx_A 3-hexulose-6-phosphate 95.0 0.6 2E-05 39.0 13.6 87 155-250 42-135 (207)
317 3my9_A Muconate cycloisomerase 94.9 0.2 6.9E-06 46.4 11.4 87 154-250 178-273 (377)
318 3h5d_A DHDPS, dihydrodipicolin 94.9 0.098 3.3E-06 47.4 9.0 91 178-271 33-129 (311)
319 4avf_A Inosine-5'-monophosphat 94.9 0.079 2.7E-06 51.0 8.8 68 176-249 231-298 (490)
320 4af0_A Inosine-5'-monophosphat 94.9 0.08 2.7E-06 51.2 8.7 68 177-250 284-351 (556)
321 1v5x_A PRA isomerase, phosphor 94.9 0.81 2.8E-05 38.6 14.1 88 156-253 89-178 (203)
322 2wqp_A Polysialic acid capsule 94.9 0.59 2E-05 42.9 14.0 145 72-248 31-180 (349)
323 1r0m_A N-acylamino acid racema 94.8 0.34 1.2E-05 44.7 12.7 86 154-249 177-269 (375)
324 3ffs_A Inosine-5-monophosphate 94.8 0.058 2E-06 50.6 7.3 67 176-249 146-212 (400)
325 3ih1_A Methylisocitrate lyase; 94.8 0.56 1.9E-05 42.2 13.6 89 155-255 148-249 (305)
326 4fxs_A Inosine-5'-monophosphat 94.7 0.094 3.2E-06 50.6 8.8 69 175-249 232-300 (496)
327 3si9_A DHDPS, dihydrodipicolin 94.7 2.3 8E-05 38.2 21.4 181 12-252 27-230 (315)
328 3a5f_A Dihydrodipicolinate syn 94.7 0.059 2E-06 48.3 6.8 77 179-255 28-109 (291)
329 1vli_A Spore coat polysacchari 94.7 0.69 2.4E-05 42.9 14.1 145 72-248 40-190 (385)
330 3eb2_A Putative dihydrodipicol 94.7 0.036 1.2E-06 50.0 5.3 91 179-272 31-126 (300)
331 4dpp_A DHDPS 2, dihydrodipicol 94.7 0.097 3.3E-06 48.4 8.3 90 179-271 86-180 (360)
332 1jub_A Dihydroorotate dehydrog 94.6 0.1 3.4E-06 47.0 8.3 157 11-193 93-271 (311)
333 2zc8_A N-acylamino acid racema 94.6 0.47 1.6E-05 43.6 12.9 86 154-249 170-262 (369)
334 3v3w_A Starvation sensing prot 94.5 0.24 8.4E-06 46.7 11.0 152 72-250 147-308 (424)
335 3ru6_A Orotidine 5'-phosphate 94.5 0.09 3.1E-06 47.4 7.6 64 178-255 163-236 (303)
336 2hmc_A AGR_L_411P, dihydrodipi 94.5 0.13 4.3E-06 47.3 8.7 89 179-272 53-146 (344)
337 1f76_A Dihydroorotate dehydrog 94.5 0.11 3.7E-06 47.4 8.3 103 64-193 213-318 (336)
338 3gd6_A Muconate cycloisomerase 94.5 0.38 1.3E-05 44.8 12.1 118 74-252 142-271 (391)
339 3hgj_A Chromate reductase; TIM 94.5 0.34 1.2E-05 44.4 11.6 89 64-192 221-317 (349)
340 3r0u_A Enzyme of enolase super 94.4 0.76 2.6E-05 42.6 14.0 88 154-251 173-271 (379)
341 4adt_A Pyridoxine biosynthetic 94.4 0.17 5.7E-06 45.5 9.1 76 169-246 24-104 (297)
342 1jcn_A Inosine monophosphate d 94.4 0.12 3.9E-06 50.1 8.6 68 176-249 257-324 (514)
343 2gjl_A Hypothetical protein PA 94.4 0.24 8.1E-06 44.9 10.3 81 154-248 56-144 (328)
344 3tfx_A Orotidine 5'-phosphate 94.3 0.13 4.5E-06 45.3 8.1 79 178-276 149-237 (259)
345 1pii_A N-(5'phosphoribosyl)ant 94.3 0.12 4.2E-06 49.1 8.4 86 153-249 194-282 (452)
346 3g8r_A Probable spore coat pol 94.3 0.75 2.6E-05 42.2 13.2 82 155-247 81-166 (350)
347 3b0p_A TRNA-dihydrouridine syn 94.2 0.4 1.4E-05 44.0 11.5 92 64-193 128-225 (350)
348 3i6e_A Muconate cycloisomerase 94.1 0.49 1.7E-05 43.9 11.9 88 154-251 180-275 (385)
349 3g8r_A Probable spore coat pol 94.1 2 6.7E-05 39.4 15.5 236 11-285 4-262 (350)
350 1yad_A Regulatory protein TENI 94.0 0.57 2E-05 39.6 11.4 44 151-194 150-193 (221)
351 3l5l_A Xenobiotic reductase A; 94.0 0.3 1E-05 45.1 10.2 89 64-192 227-324 (363)
352 3vav_A 3-methyl-2-oxobutanoate 94.0 1.5 5.2E-05 38.7 14.2 99 150-250 14-127 (275)
353 3vnd_A TSA, tryptophan synthas 93.9 0.11 3.9E-06 45.9 6.8 42 153-194 194-236 (267)
354 3i65_A Dihydroorotate dehydrog 93.8 0.23 7.9E-06 46.7 9.0 101 64-193 270-374 (415)
355 1vrd_A Inosine-5'-monophosphat 93.7 0.19 6.5E-06 48.2 8.6 68 176-249 239-306 (494)
356 2ehh_A DHDPS, dihydrodipicolin 93.7 3.6 0.00012 36.5 21.1 179 13-252 7-208 (294)
357 1tv5_A Dhodehase, dihydroorota 93.7 0.34 1.2E-05 46.0 10.0 101 64-193 298-402 (443)
358 3p3b_A Mandelate racemase/muco 93.7 0.27 9.3E-06 45.8 9.3 90 151-250 185-286 (392)
359 2htm_A Thiazole biosynthesis p 93.6 0.14 4.9E-06 45.0 6.8 40 154-193 165-207 (268)
360 3tcs_A Racemase, putative; PSI 93.6 1.5 5.2E-05 40.7 14.4 88 153-250 185-281 (388)
361 1xi3_A Thiamine phosphate pyro 93.6 0.91 3.1E-05 37.9 11.8 44 151-194 148-191 (215)
362 3fv9_G Mandelate racemase/muco 93.6 1.3 4.4E-05 41.1 13.8 122 72-250 143-274 (386)
363 3m5v_A DHDPS, dihydrodipicolin 93.6 3.8 0.00013 36.5 20.6 179 12-252 13-215 (301)
364 2r8w_A AGR_C_1641P; APC7498, d 93.6 4.1 0.00014 36.9 20.5 183 13-252 40-245 (332)
365 3tr2_A Orotidine 5'-phosphate 93.6 0.18 6.3E-06 43.8 7.4 64 178-255 149-222 (239)
366 3a5f_A Dihydrodipicolinate syn 93.5 3.8 0.00013 36.3 17.8 180 12-252 7-208 (291)
367 3f4w_A Putative hexulose 6 pho 93.5 1.1 3.7E-05 37.4 12.1 87 155-249 42-134 (211)
368 2yci_X 5-methyltetrahydrofolat 93.5 1.7 5.8E-05 38.4 13.7 73 73-191 31-105 (271)
369 3bo9_A Putative nitroalkan dio 93.5 0.33 1.1E-05 44.1 9.4 81 154-248 66-150 (326)
370 3t6c_A RSPA, putative MAND fam 93.5 0.61 2.1E-05 44.1 11.5 88 153-250 226-322 (440)
371 4ef8_A Dihydroorotate dehydrog 93.4 0.21 7.3E-06 46.0 8.0 110 63-193 194-306 (354)
372 3ldv_A Orotidine 5'-phosphate 93.4 0.23 7.8E-06 43.6 7.7 64 178-255 167-240 (255)
373 4aaj_A N-(5'-phosphoribosyl)an 93.4 0.87 3E-05 39.2 11.3 96 149-253 99-206 (228)
374 1o5k_A DHDPS, dihydrodipicolin 93.3 4.3 0.00015 36.3 19.3 180 12-252 18-223 (306)
375 2cu0_A Inosine-5'-monophosphat 93.3 0.5 1.7E-05 45.3 10.7 65 176-249 230-294 (486)
376 3o63_A Probable thiamine-phosp 93.2 0.93 3.2E-05 39.4 11.3 44 151-194 175-220 (243)
377 1eep_A Inosine 5'-monophosphat 93.1 0.25 8.6E-06 46.2 8.2 68 176-249 155-222 (404)
378 1xky_A Dihydrodipicolinate syn 93.1 4.5 0.00016 36.0 22.9 181 13-253 18-220 (301)
379 4dye_A Isomerase; enolase fami 93.1 1.2 4E-05 41.6 12.7 86 154-251 200-293 (398)
380 1vyr_A Pentaerythritol tetrani 93.1 0.46 1.6E-05 43.8 9.8 41 153-193 282-323 (364)
381 1mzh_A Deoxyribose-phosphate a 93.0 0.88 3E-05 38.9 10.8 41 152-192 160-203 (225)
382 2e6f_A Dihydroorotate dehydrog 93.0 0.18 6.1E-06 45.4 6.7 110 63-193 161-273 (314)
383 3dgb_A Muconate cycloisomerase 92.9 1.3 4.5E-05 40.9 12.7 87 154-250 181-276 (382)
384 3noy_A 4-hydroxy-3-methylbut-2 92.9 0.47 1.6E-05 43.4 9.2 79 64-193 31-112 (366)
385 2yyu_A Orotidine 5'-phosphate 92.8 0.19 6.5E-06 43.7 6.5 60 182-255 152-221 (246)
386 3qze_A DHDPS, dihydrodipicolin 92.8 5.2 0.00018 35.9 22.3 181 12-252 28-230 (314)
387 2gou_A Oxidoreductase, FMN-bin 92.8 0.46 1.6E-05 43.9 9.2 40 153-192 281-321 (365)
388 2tps_A Protein (thiamin phosph 92.7 0.85 2.9E-05 38.5 10.4 43 152-194 158-201 (227)
389 2rfg_A Dihydrodipicolinate syn 92.6 5.3 0.00018 35.5 18.8 179 13-252 7-207 (297)
390 3d0c_A Dihydrodipicolinate syn 92.5 5.6 0.00019 35.6 20.2 178 13-251 17-216 (314)
391 2zbt_A Pyridoxal biosynthesis 92.5 0.5 1.7E-05 42.1 8.9 77 164-246 20-104 (297)
392 4e8g_A Enolase, mandelate race 92.4 1.3 4.3E-05 41.3 11.8 117 73-250 163-289 (391)
393 3bw2_A 2-nitropropane dioxygen 92.4 0.96 3.3E-05 41.6 11.0 60 176-248 112-171 (369)
394 2ojp_A DHDPS, dihydrodipicolin 92.3 5.7 0.00019 35.1 17.3 181 13-252 7-208 (292)
395 2ze3_A DFA0005; organic waste 92.2 4.2 0.00014 35.9 14.4 87 155-255 130-238 (275)
396 2c6q_A GMP reductase 2; TIM ba 92.2 0.44 1.5E-05 43.8 8.4 67 177-249 121-189 (351)
397 3fcp_A L-Ala-D/L-Glu epimerase 92.2 2.1 7.2E-05 39.5 13.1 87 154-250 180-275 (381)
398 3pm6_A Putative fructose-bisph 92.1 2.1 7.3E-05 38.3 12.4 113 174-286 172-297 (306)
399 3iwp_A Copper homeostasis prot 92.1 0.53 1.8E-05 41.9 8.3 72 174-249 47-131 (287)
400 2z6i_A Trans-2-enoyl-ACP reduc 92.0 0.7 2.4E-05 41.9 9.4 81 154-248 52-136 (332)
401 2nv1_A Pyridoxal biosynthesis 92.0 2.3 7.8E-05 37.9 12.7 89 154-247 10-105 (305)
402 3q94_A Fructose-bisphosphate a 91.9 4.1 0.00014 36.2 14.0 110 174-285 159-285 (288)
403 1ujp_A Tryptophan synthase alp 91.9 0.3 1E-05 43.2 6.5 40 153-194 190-230 (271)
404 3oix_A Putative dihydroorotate 91.7 0.49 1.7E-05 43.4 8.0 43 151-193 259-304 (345)
405 3fok_A Uncharacterized protein 91.7 1.3 4.5E-05 39.7 10.5 78 163-254 174-278 (307)
406 3dip_A Enolase; structural gen 91.7 0.7 2.4E-05 43.3 9.3 90 152-250 198-296 (410)
407 3eoo_A Methylisocitrate lyase; 91.7 3.7 0.00013 36.7 13.5 67 178-255 176-245 (298)
408 3oa3_A Aldolase; structural ge 91.6 5 0.00017 35.6 14.1 76 177-252 130-211 (288)
409 3ngj_A Deoxyribose-phosphate a 91.5 2 7E-05 37.1 11.3 77 177-253 99-181 (239)
410 3na8_A Putative dihydrodipicol 91.5 7.4 0.00025 34.9 23.6 180 12-251 29-231 (315)
411 2r14_A Morphinone reductase; H 91.5 0.62 2.1E-05 43.2 8.6 40 154-193 288-328 (377)
412 2r91_A 2-keto-3-deoxy-(6-phosp 91.5 0.94 3.2E-05 40.2 9.5 90 178-273 24-119 (286)
413 1dbt_A Orotidine 5'-phosphate 91.4 0.34 1.1E-05 41.9 6.3 60 182-255 151-220 (239)
414 4e4f_A Mannonate dehydratase; 91.3 0.79 2.7E-05 43.2 9.2 87 154-250 215-310 (426)
415 1gvf_A Tagatose-bisphosphate a 91.2 4.4 0.00015 36.0 13.4 110 174-285 155-281 (286)
416 3flu_A DHDPS, dihydrodipicolin 91.2 7.7 0.00026 34.4 22.9 181 12-252 12-214 (297)
417 4dpp_A DHDPS 2, dihydrodipicol 91.0 1.1 3.9E-05 41.2 9.7 79 73-194 77-162 (360)
418 3tak_A DHDPS, dihydrodipicolin 91.0 7.8 0.00027 34.2 22.7 181 12-252 6-208 (291)
419 3tr9_A Dihydropteroate synthas 91.0 0.68 2.3E-05 41.8 8.0 86 72-191 45-130 (314)
420 3fa4_A 2,3-dimethylmalate lyas 91.0 2.5 8.7E-05 37.8 11.7 94 156-250 8-116 (302)
421 3tha_A Tryptophan synthase alp 90.9 0.38 1.3E-05 42.1 6.0 40 154-194 188-228 (252)
422 1gox_A (S)-2-hydroxy-acid oxid 90.9 2.1 7.3E-05 39.4 11.5 42 206-250 213-254 (370)
423 2isw_A Putative fructose-1,6-b 90.8 4.1 0.00014 36.8 12.9 109 174-285 153-304 (323)
424 3jr2_A Hexulose-6-phosphate sy 90.8 2.5 8.4E-05 35.7 11.1 86 155-249 48-139 (218)
425 1rpx_A Protein (ribulose-phosp 90.8 3.7 0.00013 34.7 12.3 41 154-194 163-208 (230)
426 1zco_A 2-dehydro-3-deoxyphosph 90.8 2.4 8.2E-05 37.2 11.2 118 72-240 33-151 (262)
427 1vhn_A Putative flavin oxidore 90.6 0.65 2.2E-05 41.8 7.7 85 63-193 127-213 (318)
428 3vav_A 3-methyl-2-oxobutanoate 90.6 8.5 0.00029 33.9 17.0 39 177-227 177-215 (275)
429 3vk5_A MOEO5; TIM barrel, tran 90.6 0.44 1.5E-05 42.4 6.2 43 152-194 212-257 (286)
430 3lye_A Oxaloacetate acetyl hyd 90.6 3.5 0.00012 37.0 12.3 68 178-255 183-253 (307)
431 3kru_A NADH:flavin oxidoreduct 90.6 2.7 9.3E-05 38.3 11.8 41 152-192 264-306 (343)
432 3ik4_A Mandelate racemase/muco 90.5 4.4 0.00015 37.1 13.3 87 154-250 175-271 (365)
433 1ep3_A Dihydroorotate dehydrog 90.4 0.94 3.2E-05 40.3 8.5 41 153-193 229-270 (311)
434 1w3i_A EDA, 2-keto-3-deoxy glu 90.4 1.6 5.4E-05 38.9 9.9 89 179-273 26-120 (293)
435 3fkr_A L-2-keto-3-deoxyarabona 90.3 9.6 0.00033 34.0 20.4 185 12-250 13-219 (309)
436 3o07_A Pyridoxine biosynthesis 90.2 1.4 4.8E-05 39.0 9.1 73 170-247 15-95 (291)
437 3e96_A Dihydrodipicolinate syn 90.2 1.3 4.5E-05 39.9 9.3 78 73-193 30-113 (316)
438 3daq_A DHDPS, dihydrodipicolin 90.2 9.3 0.00032 33.7 20.2 179 12-251 8-209 (292)
439 3q94_A Fructose-bisphosphate a 90.2 0.9 3.1E-05 40.5 7.9 46 149-194 190-237 (288)
440 3qfe_A Putative dihydrodipicol 90.1 10 0.00035 34.0 17.5 181 13-251 16-222 (318)
441 4hnl_A Mandelate racemase/muco 90.0 1.8 6.2E-05 40.5 10.4 144 72-250 151-303 (421)
442 4a35_A Mitochondrial enolase s 90.0 5.6 0.00019 37.5 13.8 120 74-250 201-330 (441)
443 3o1n_A 3-dehydroquinate dehydr 90.0 7.7 0.00026 34.2 13.9 132 65-250 42-197 (276)
444 2yxg_A DHDPS, dihydrodipicolin 90.0 9.7 0.00033 33.6 20.3 177 13-252 7-206 (289)
445 1s2w_A Phosphoenolpyruvate pho 89.9 1.6 5.3E-05 39.1 9.4 71 177-255 174-244 (295)
446 1vqt_A Orotidine 5'-phosphate 89.8 0.26 8.9E-06 42.0 4.0 59 178-255 131-198 (213)
447 1twd_A Copper homeostasis prot 89.8 1.6 5.6E-05 38.1 9.1 73 174-250 9-94 (256)
448 2hjp_A Phosphonopyruvate hydro 89.8 4.9 0.00017 35.7 12.5 93 157-250 7-111 (290)
449 2v9d_A YAGE; dihydrodipicolini 89.7 11 0.00039 34.1 21.3 180 12-251 36-241 (343)
450 2wkj_A N-acetylneuraminate lya 89.7 11 0.00036 33.6 21.8 181 12-253 16-219 (303)
451 3sr7_A Isopentenyl-diphosphate 89.7 1.7 5.9E-05 40.0 9.7 83 164-249 143-237 (365)
452 2nuw_A 2-keto-3-deoxygluconate 89.6 1.7 5.9E-05 38.5 9.4 90 179-273 26-120 (288)
453 1tqx_A D-ribulose-5-phosphate 89.3 2.3 7.9E-05 36.4 9.7 42 152-193 159-201 (227)
454 1gvf_A Tagatose-bisphosphate a 89.3 1.2 4.1E-05 39.7 8.0 46 149-194 186-233 (286)
455 4dxk_A Mandelate racemase / mu 89.3 0.71 2.4E-05 43.1 6.9 89 152-250 195-292 (400)
456 3lye_A Oxaloacetate acetyl hyd 89.2 5.2 0.00018 35.9 12.3 95 155-250 14-124 (307)
457 3cpr_A Dihydrodipicolinate syn 88.9 12 0.00041 33.2 21.8 178 13-252 22-221 (304)
458 3b8i_A PA4872 oxaloacetate dec 88.9 4.1 0.00014 36.2 11.3 93 157-250 13-118 (287)
459 4aaj_A N-(5'-phosphoribosyl)an 88.6 4.4 0.00015 34.7 11.0 77 167-249 20-99 (228)
460 3eoo_A Methylisocitrate lyase; 88.6 5.7 0.00019 35.5 12.0 91 156-250 13-119 (298)
461 2vef_A Dihydropteroate synthas 88.6 1.1 3.7E-05 40.5 7.3 37 154-191 74-110 (314)
462 3h5d_A DHDPS, dihydrodipicolin 88.4 13 0.00046 33.1 22.3 181 12-253 12-215 (311)
463 3ovp_A Ribulose-phosphate 3-ep 88.3 0.95 3.2E-05 38.9 6.5 41 153-193 156-197 (228)
464 1aj0_A DHPS, dihydropteroate s 88.2 0.9 3.1E-05 40.4 6.5 37 154-191 79-115 (282)
465 1zco_A 2-dehydro-3-deoxyphosph 88.2 3.1 0.00011 36.4 9.9 192 13-252 24-230 (262)
466 1vr6_A Phospho-2-dehydro-3-deo 88.0 6.2 0.00021 36.0 12.1 125 73-248 117-246 (350)
467 1o66_A 3-methyl-2-oxobutanoate 87.9 13 0.00046 32.6 17.7 133 30-228 26-204 (275)
468 3s5o_A 4-hydroxy-2-oxoglutarat 87.9 14 0.00049 32.8 20.0 183 12-252 19-224 (307)
469 3sgz_A Hydroxyacid oxidase 2; 87.8 3.5 0.00012 37.8 10.3 42 205-249 204-245 (352)
470 1oy0_A Ketopantoate hydroxymet 87.8 12 0.0004 33.1 13.4 116 82-248 47-198 (281)
471 3vzx_A Heptaprenylglyceryl pho 87.8 0.82 2.8E-05 39.4 5.8 41 153-194 167-209 (228)
472 1vs1_A 3-deoxy-7-phosphoheptul 87.8 9.1 0.00031 33.7 12.7 126 72-248 48-178 (276)
473 3aty_A Tcoye, prostaglandin F2 87.7 1.9 6.5E-05 39.9 8.6 37 155-192 298-335 (379)
474 1f6k_A N-acetylneuraminate lya 87.6 14 0.00048 32.5 21.6 181 12-253 8-211 (293)
475 3k13_A 5-methyltetrahydrofolat 87.5 3.6 0.00012 36.8 10.0 29 72-100 33-61 (300)
476 3ctl_A D-allulose-6-phosphate 87.5 1.4 4.7E-05 37.9 7.1 41 153-193 150-195 (231)
477 1m3u_A 3-methyl-2-oxobutanoate 87.4 14 0.00048 32.3 16.5 133 30-228 26-204 (264)
478 4a29_A Engineered retro-aldol 87.3 2.8 9.7E-05 36.6 8.9 71 175-251 65-135 (258)
479 1viz_A PCRB protein homolog; s 87.2 0.85 2.9E-05 39.6 5.5 41 153-194 169-211 (240)
480 3vkj_A Isopentenyl-diphosphate 87.1 7.3 0.00025 35.8 12.2 88 160-249 113-218 (368)
481 3w01_A Heptaprenylglyceryl pho 87.1 0.8 2.7E-05 39.6 5.2 41 153-194 173-215 (235)
482 3ih1_A Methylisocitrate lyase; 87.0 5.3 0.00018 35.8 10.8 91 156-250 20-125 (305)
483 2i1o_A Nicotinate phosphoribos 87.0 6.4 0.00022 36.6 11.8 95 154-254 197-303 (398)
484 1v5x_A PRA isomerase, phosphor 87.0 7.4 0.00025 32.6 11.3 78 169-249 2-82 (203)
485 1ub3_A Aldolase protein; schif 87.0 4.4 0.00015 34.5 9.9 76 177-252 75-156 (220)
486 1rvg_A Fructose-1,6-bisphospha 86.8 17 0.00057 32.5 14.4 110 174-285 153-302 (305)
487 1nsj_A PRAI, phosphoribosyl an 86.6 7.5 0.00026 32.6 11.1 78 169-249 3-83 (205)
488 1ydn_A Hydroxymethylglutaryl-C 86.6 4.3 0.00015 35.9 10.1 150 74-273 24-195 (295)
489 1zlp_A PSR132, petal death pro 86.5 8.8 0.0003 34.6 12.1 91 157-250 31-137 (318)
490 1p0k_A Isopentenyl-diphosphate 86.5 6.9 0.00024 35.4 11.7 84 164-249 115-209 (349)
491 1vkf_A Glycerol uptake operon 86.5 4.5 0.00015 33.6 9.3 36 155-194 142-178 (188)
492 1rd5_A Tryptophan synthase alp 86.5 1.2 4E-05 38.8 6.2 42 153-194 189-231 (262)
493 1s2w_A Phosphoenolpyruvate pho 86.4 5.3 0.00018 35.6 10.5 92 156-250 10-115 (295)
494 2qiw_A PEP phosphonomutase; st 86.3 5.5 0.00019 34.7 10.3 126 82-248 33-187 (255)
495 2f6u_A GGGPS, (S)-3-O-geranylg 86.3 0.82 2.8E-05 39.5 4.9 41 153-194 177-219 (234)
496 2hmc_A AGR_L_411P, dihydrodipi 86.2 3.5 0.00012 37.6 9.4 24 73-96 44-67 (344)
497 1xg4_A Probable methylisocitra 86.1 8.6 0.0003 34.2 11.7 90 157-249 9-114 (295)
498 1zlp_A PSR132, petal death pro 86.0 3.3 0.00011 37.4 9.0 68 177-255 193-263 (318)
499 1eye_A DHPS 1, dihydropteroate 86.0 2.8 9.7E-05 37.1 8.4 35 155-191 71-105 (280)
500 3fa4_A 2,3-dimethylmalate lyas 86.0 10 0.00035 33.8 12.1 67 179-255 176-245 (302)
No 1
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=100.00 E-value=9.4e-58 Score=424.35 Aligned_cols=290 Identities=46% Similarity=0.748 Sum_probs=261.3
Q ss_pred CceeecCcccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCCCHHHHhccCC-CCceEEeeecCCchHHH
Q 021739 1 MTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTGP-GIRFFQLYVTKHRNVDA 79 (308)
Q Consensus 1 ~~t~~~g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~~e~i~~~~~-~~~~~Ql~~~~d~~~~~ 79 (308)
|+|++||++++.||++||+++.++.||++|..++++|+++|+++++|+++++++||+++..+ ++.|||||+..|++.+.
T Consensus 59 ~~t~llG~~~~~P~~iaP~g~~~l~~~~ge~~~araa~~~gi~~~lSt~ss~s~e~v~~~~~~~~~wfQlY~~~d~~~~~ 138 (352)
T 3sgz_A 59 TRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNK 138 (352)
T ss_dssp CCEEETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHSTTCEEEEECCCCSCHHHHH
T ss_pred CceEECCcccCCcceechHHHHHhcCccHHHHHHHHHHHcCCCeEeCCCCCCCHHHHHHhccCccceeccccCCCHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999998876 48899999999999999
Q ss_pred HHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHH
Q 021739 80 QLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKW 159 (308)
Q Consensus 80 ~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ 159 (308)
+++++++++|+++|++|+|+|+.|+|++|+|++|..|++++.+++.... ....++. ......|+.++|+.|++
T Consensus 139 ~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~----~~~~~~~---~~~~~~d~~~~w~~i~~ 211 (352)
T 3sgz_A 139 QMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALRALK----EEKPTQS---VPVLFPKASFCWNDLSL 211 (352)
T ss_dssp HHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC----------------------CCCTTCCHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhcccc----cccccch---hhhhccCCCCCHHHHHH
Confidence 9999999999999999999999999999999999999766554443211 0000011 11134789999999999
Q ss_pred HHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHH
Q 021739 160 LQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKAL 239 (308)
Q Consensus 160 ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l 239 (308)
+|+.+++||++|++.+.++++.+.++|+|+|+++||||++.++++++++.|.++++.+.+++|||++|||+++.|+.|+|
T Consensus 212 lr~~~~~PvivK~v~~~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaL 291 (352)
T 3sgz_A 212 LQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKAL 291 (352)
T ss_dssp HHHHCCSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHH
T ss_pred HHHhcCCCEEEEecCcHHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988887789999999999999999999
Q ss_pred HcCCCEEEEchHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHcCCCCHhhhcccceec
Q 021739 240 ALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNHIVT 297 (308)
Q Consensus 240 ~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~~~~~ 297 (308)
++|||+|++||+|++++.+.|++++.++++.+++||+.+|..+|+++++|++++.++.
T Consensus 292 alGA~aV~iGr~~l~~l~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~~~y 349 (352)
T 3sgz_A 292 ALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLIQF 349 (352)
T ss_dssp HTTCSEEEESHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSBGGGCCGGGBSS
T ss_pred HcCCCEEEECHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHHHhhhcchh
Confidence 9999999999999999888899999999999999999999999999999999988763
No 2
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=100.00 E-value=4.4e-54 Score=407.75 Aligned_cols=298 Identities=56% Similarity=0.931 Sum_probs=261.8
Q ss_pred CceeecCcccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCCCHHHHhccCC-CCceEEeeecCCchHHH
Q 021739 1 MTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTGP-GIRFFQLYVTKHRNVDA 79 (308)
Q Consensus 1 ~~t~~~g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~~e~i~~~~~-~~~~~Ql~~~~d~~~~~ 79 (308)
|+|+|||++++.||++|||+++++.||++|.+++++|+++|+++++|+++++++|++.+..+ ++.|||||.+.|++.+.
T Consensus 84 ~st~i~G~~l~~Pi~iAPmg~~~l~~~~~e~~laraA~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~d~~~~~ 163 (392)
T 2nzl_A 84 LSTSVLGQRVSMPICVGATAMQRMAHVDGELATVRACQSLGTGMMLSSWATSSIEEVAEAGPEALRWLQLYIYKDREVTK 163 (392)
T ss_dssp CCEEETTEEESSSEEECCCSCGGGTSTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHCTTSEEEEEECCBSSHHHHH
T ss_pred cceEECCEecCCceEeccccccccccchHHHHHHHHHHHcCCCeeccchHHHHHHHHHHhcCCCcEEEEEEecCCHHHHH
Confidence 68999999999999999999999999999999999999999999999999899999987644 58999999889999999
Q ss_pred HHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccc-c-CCC-CCCchhhhHhhhhcccccCHHH
Q 021739 80 QLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIG-K-MDK-TDDSGLASYVANQIDRSLNWKD 156 (308)
Q Consensus 80 ~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~-~-~~~-~~~~~~~~~~~~~~d~~~~~~~ 156 (308)
+++++++++|++++++|+|||+.|+|++|+|++|..|+++..+++...-.. . ... ..+.....++++.+|+++.|+.
T Consensus 164 ~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~~~~~~~ 243 (392)
T 2nzl_A 164 KLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWED 243 (392)
T ss_dssp HHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCTTCCHHH
T ss_pred HHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCChHHHHHH
Confidence 999999999999999999999999999999999999988754443210000 0 000 1112233577777899999999
Q ss_pred HHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHH
Q 021739 157 VKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVF 236 (308)
Q Consensus 157 i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~ 236 (308)
|+++|+.+++||++|++.++++++.+.++|+|+|+++||||++.++++++++.+.++++.+.+++|||++|||+++.|+.
T Consensus 244 i~~lr~~~~~PvivKgv~~~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~ 323 (392)
T 2nzl_A 244 IKWLRRLTSLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVL 323 (392)
T ss_dssp HHHHC--CCSCEEEEEECCHHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEECSSCCSHHHHH
T ss_pred HHHHHHhhCCCEEEEecCCHHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEECCCCCHHHHH
Confidence 99999999999999999999999999999999999999999998999999999999998886679999999999999999
Q ss_pred HHHHcCCCEEEEchHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHcCCCCHhhhcccceecc
Q 021739 237 KALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNHIVTH 298 (308)
Q Consensus 237 k~l~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~~~~~~ 298 (308)
|+|++|||+|++||||++++.+.|++++.++++.+++||+.+|..+|++++++|++..+...
T Consensus 324 kalalGAd~V~iGr~~l~~~~~~g~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~l~~~ 385 (392)
T 2nzl_A 324 KALALGAKAVFVGRPIVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDKTLVRKN 385 (392)
T ss_dssp HHHHTTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSBGGGCCGGGBC--
T ss_pred HHHHhCCCeeEECHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhC
Confidence 99999999999999999998888999999999999999999999999999999999988654
No 3
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=100.00 E-value=1.8e-52 Score=395.13 Aligned_cols=308 Identities=86% Similarity=1.269 Sum_probs=266.5
Q ss_pred CceeecCcccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCCCHHHHhccCCCCceEEeeecCCchHHHH
Q 021739 1 MTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQ 80 (308)
Q Consensus 1 ~~t~~~g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~~e~i~~~~~~~~~~Ql~~~~d~~~~~~ 80 (308)
|+|+|||++++.||++|||+++.+.||++|.+++++|+++|+++++|++++.++|++.+..+++.|||||++.|++.+.+
T Consensus 61 ~~t~i~G~~~~~Pi~iAPmg~~~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~~ieev~~~~~~~~~~QLy~~~d~~~~~~ 140 (370)
T 1gox_A 61 MTTTILGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQ 140 (370)
T ss_dssp CCEEETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHTTCCEEECTTCSSCHHHHHTTCCCCEEEEECCBSSHHHHHH
T ss_pred CceEECCcccCCceeEcccchhhhccchHHHHHHHHHHHcCCCeeccCCCCCCHHHHHhhcCCCceEEEecCCCchHHHH
Confidence 68999999999999999998888889999999999999999999999999999999987766789999999999999999
Q ss_pred HHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHH
Q 021739 81 LVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWL 160 (308)
Q Consensus 81 ~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~i 160 (308)
+++++++.|+++|+||+|||+.++|++++|++|..|.+++.+++............+.....++++.+|+.+.|+.++++
T Consensus 141 ~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~~~i~~l 220 (370)
T 1gox_A 141 LVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWL 220 (370)
T ss_dssp HHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHHHHHHH
T ss_pred HHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccchHHHHHHH
Confidence 99999999999999999999999999999999999887755444221000000111233334677778999999999999
Q ss_pred HHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHH
Q 021739 161 QTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALA 240 (308)
Q Consensus 161 r~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~ 240 (308)
++.+++||++|++.++++++.+.++|+|+|+++||+|++.++++++++.+.++++.+.+++|||++|||+++.|+.|+++
T Consensus 221 ~~~~~~pv~vK~~~~~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~ 300 (370)
T 1gox_A 221 QTITSLPILVKGVITAEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALA 300 (370)
T ss_dssp HHHCCSCEEEECCCSHHHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHH
T ss_pred HHHhCCCEEEEecCCHHHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999998888888999999999888766899999999999999999999
Q ss_pred cCCCEEEEchHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHcCCCCHhhhcccceeccCCC--CccccCC
Q 021739 241 LGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNHIVTHWDT--PGAVARL 308 (308)
Q Consensus 241 ~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~~~~~~~~~--~~~~~~~ 308 (308)
+|||+|++||+|++++.+.|++++.++++.+++||+.+|.++|++++++++++.+....+. +++|+||
T Consensus 301 ~GAdaV~iGr~~l~~~~~~G~~gv~~~~~~l~~el~~~m~~~G~~~i~el~~~~l~~~~~~~~~~~~~~~ 370 (370)
T 1gox_A 301 LGAAGVFIGRPVVFSLAAEGEAGVKKVLQMMRDEFELTMALSGCRSLKEISRSHIAADWDGPSSRAVARL 370 (370)
T ss_dssp HTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSBTTTCCGGGEEETTC----------
T ss_pred cCCCEEeecHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCCHHHhhhcceeccccccccchhhcC
Confidence 9999999999999988778899999999999999999999999999999999998875554 4567775
No 4
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=100.00 E-value=3.5e-53 Score=398.99 Aligned_cols=292 Identities=35% Similarity=0.587 Sum_probs=247.3
Q ss_pred CceeecCcccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCCCHHHHhccC-CCCceEEeeecCCchHHH
Q 021739 1 MTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTG-PGIRFFQLYVTKHRNVDA 79 (308)
Q Consensus 1 ~~t~~~g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~~e~i~~~~-~~~~~~Ql~~~~d~~~~~ 79 (308)
|+|+|||++++.||++|||++++++||++|.+++++|+++|+++++|++++.++|++.... +++.|||||.+.|++.+.
T Consensus 70 ~st~i~G~~l~~Pi~iAPma~~g~~~~~~e~~la~aa~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~d~~~~~ 149 (368)
T 2nli_A 70 TSTEILGHKIKAPFIMAPIAAHGLAHTTKEAGTARAVSEFGTIMSISAYSGATFEEISEGLNGGPRWFQIYMAKDDQQNR 149 (368)
T ss_dssp CCEEETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHHTTCCEEEEECCBSSHHHHH
T ss_pred cceEECCEecCCceeecchhhccCCCcHHHHHHHHHHHHcCCCEEeechHhHHHHHHHHhCCCCCEEEEEeccCCHHHHH
Confidence 6899999999999999999988889999999999999999999999999989999987653 358999999889999999
Q ss_pred HHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHH
Q 021739 80 QLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKW 159 (308)
Q Consensus 80 ~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ 159 (308)
+++++++++|+++++||+|||+.++|++|+|++|..| ++.+++... ... ...+... +++++++|+.++|+.|++
T Consensus 150 ~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p--~~~~~~~~~-~~~--~~~g~~l-~~~~~~~d~~~~~~~i~~ 223 (368)
T 2nli_A 150 DILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYP--FGMPIVQRY-LRG--TAEGMSL-NNIYGASKQKISPRDIEE 223 (368)
T ss_dssp HHHHHHHHTTCSCEEEESBCC---CBC--------CC--SCCHHHHHH-HTT--SGGGC------CTTBCSBCCHHHHHH
T ss_pred HHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCc--chhhhhhcc-ccc--CCCCchH-HhhhhccCchhhHHHHHH
Confidence 9999999999999999999999999999999999887 221122100 000 0001111 345666789999999999
Q ss_pred HHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHH
Q 021739 160 LQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKAL 239 (308)
Q Consensus 160 ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l 239 (308)
+|+.+++||++|++.++++++.+.++|+|+|+++||||++.++++++++.+.++++.+.+++|||++|||+++.|+.|+|
T Consensus 224 lr~~~~~PvivK~v~~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~kal 303 (368)
T 2nli_A 224 IAGHSGLPVFVKGIQHPEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKAL 303 (368)
T ss_dssp HHHHSSSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHHH
T ss_pred HHHHcCCCEEEEcCCCHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998886679999999999999999999
Q ss_pred HcCCCEEEEchHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHcCCCCHhhhcccceecc
Q 021739 240 ALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNHIVTH 298 (308)
Q Consensus 240 ~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~~~~~~ 298 (308)
++|||+|++||||++++.+.|++++.++++.+++||+.+|..+|++++.+|++..+.+.
T Consensus 304 alGAd~V~iGr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~ 362 (368)
T 2nli_A 304 ASGADVVALGRPVLFGLALGGWQGAYSVLDYFQKDLTRVMQLTGSQNVEDLKGLDLFDN 362 (368)
T ss_dssp HTTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSHHHHHTCCEEEC
T ss_pred HcCCCEEEECHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCcCHHHhccccEeec
Confidence 99999999999999998888999999999999999999999999999999999988764
No 5
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=100.00 E-value=9.6e-50 Score=389.43 Aligned_cols=293 Identities=38% Similarity=0.628 Sum_probs=258.8
Q ss_pred CceeecCcccCCceEeccccCcccCCC-HHHHHHHHHHHH--cCCceeecCCCCCCHHHHhccC---CCCceEEeeecCC
Q 021739 1 MTTTVLGFNISMPIMIAPTAFQKMAHP-EGECATARAASA--AGTIMTLSSWATSSVEEVSSTG---PGIRFFQLYVTKH 74 (308)
Q Consensus 1 ~~t~~~g~~~~~Pi~iapm~~~~~~~~-~~~~~~a~~a~~--~g~~~~~s~~~~~~~e~i~~~~---~~~~~~Ql~~~~d 74 (308)
|+|+|||++++.||+||||++++++|| +++.+++++|++ +|+++++|++++.+++++.+.. +.+.|||||++.|
T Consensus 179 ~st~i~G~~l~~Pi~iAPma~~~l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s~e~v~~~~~~~~~~~~~QLy~~~d 258 (511)
T 1kbi_A 179 ISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSD 258 (511)
T ss_dssp CCEEETTEEESSSEEECCCSCGGGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHHHTCCCSSCCEEEEECCCSS
T ss_pred CccccCCccCCCCeEeccchhccccChhhHHHHHHHHHHHhCCCeeEEeCCcccCCHHHHHhhcCCCCCCeEEEEeecCC
Confidence 689999999999999999999999999 999999999999 9999999999999999998654 2488999998999
Q ss_pred chHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCC-ccccccccccccccCCCCCCchhhhHhhhhcccccC
Q 021739 75 RNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPP-HLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 153 (308)
Q Consensus 75 ~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 153 (308)
++.+.+++++++++|+++|+||+|||+.|+|++++|++|..|. ++.. ..+ .. ...+.+...++....|+.++
T Consensus 259 ~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~--~~g---~~--~~~~~g~~~~~~~~~d~~~~ 331 (511)
T 1kbi_A 259 RKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKA--MKK---TN--VEESQGASRALSKFIDPSLT 331 (511)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC---------C---CC--CSSCCCGGGGCBTTBCTTCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccc--ccc---cc--ccccccHHHHHhhccChHhH
Confidence 9999999999999999999999999999999999999998885 2221 000 00 00012223455555789999
Q ss_pred HHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHc-----cCCCeEEEecC
Q 021739 154 WKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAA-----KGRVPVFLDGG 228 (308)
Q Consensus 154 ~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~-----~~~ipvia~GG 228 (308)
|+.|+++|+.+++||++|++.+.++++.+.++|+|+|+++||||++.+.++++++.+.++++.+ ..++|||++||
T Consensus 332 ~~~i~~lr~~~~~PvivKgv~~~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GG 411 (511)
T 1kbi_A 332 WKDIEELKKKTKLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGG 411 (511)
T ss_dssp HHHHHHHHHHCSSCEEEEEECSHHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESS
T ss_pred HHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEECC
Confidence 9999999999999999999999999999999999999999999999888888999999998877 34799999999
Q ss_pred CCCHHHHHHHHHcCCCEEEEchHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHcCCCCHhhhcccceeccCC
Q 021739 229 VRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNHIVTHWD 300 (308)
Q Consensus 229 I~~~~d~~k~l~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~~~~~~~~ 300 (308)
|+++.|+.|+|++|||+|+|||||++++.+.|++++.++++.+++||+.+|..+|++++.+|++..+.....
T Consensus 412 I~~g~Dv~kaLalGAdaV~iGr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~l~~~~~ 483 (511)
T 1kbi_A 412 VRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELKPDLLDLSTL 483 (511)
T ss_dssp CCSHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGGEECTTT
T ss_pred CCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCCcHHHHhHHHhhhhhh
Confidence 999999999999999999999999999888899999999999999999999999999999999998876554
No 6
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=100.00 E-value=5.6e-49 Score=372.12 Aligned_cols=298 Identities=40% Similarity=0.681 Sum_probs=257.7
Q ss_pred CceeecCcccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCCCHHHHhccCCCCceEEeeecCCchHHHH
Q 021739 1 MTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQ 80 (308)
Q Consensus 1 ~~t~~~g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~~e~i~~~~~~~~~~Ql~~~~d~~~~~~ 80 (308)
|+|+|||+++++||++|||++.++.||++|.+++++|+++|+++++|+++++++|++....+++.|||+|+.. ++...+
T Consensus 62 ~st~i~G~~l~~Pv~iap~~~~~~~~~~~~~~~a~aa~~~G~~~~vss~s~~~le~i~~~~~~~~~fQly~~~-~~~~~~ 140 (380)
T 1p4c_A 62 LQAEVLGKRQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVIH-REIAQG 140 (380)
T ss_dssp CCEEETTEEESSSEEECCCSCGGGTSTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHCCSCEEEEECCSS-HHHHHH
T ss_pred ceeEECCeecCCceEecCccccccCCCcHHHHHHHHHHHcCCCeecCccccCCHHHHHhccCCCeEEEEEech-HHHHHH
Confidence 6899999999999999999998888999999999999999999999999999999988654568999999777 899999
Q ss_pred HHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHH
Q 021739 81 LVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWL 160 (308)
Q Consensus 81 ~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~i 160 (308)
++++++++|+++++||+|.|+.++|++++++++..|.+++..++.......++.........++....||++.|+.|+++
T Consensus 141 ~i~~a~~aG~~al~vTvd~p~~g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~~~~~~~p~~~~~~i~~i 220 (380)
T 1p4c_A 141 MVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNWEALRWL 220 (380)
T ss_dssp HHHHHHHTTCCEEEEECSCSSCCCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHHTSSCCCTTCCHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeecCccccchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHHHHHhhcCccccHHHHHHH
Confidence 99999999999999999999999999999999987765544332100000111111111222333345889999999999
Q ss_pred HHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHH
Q 021739 161 QTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALA 240 (308)
Q Consensus 161 r~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~ 240 (308)
++.+++||++|++.++++++.+.++|+|+|+++||||++.++++++++.+.++++.+ ++|||++|||+++.|+.|+++
T Consensus 221 ~~~~~~Pv~vkgv~t~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~--~~pVia~GGI~~~~dv~kal~ 298 (380)
T 1p4c_A 221 RDLWPHKLLVKGLLSAEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKT--GKPVLIDSGFRRGSDIVKALA 298 (380)
T ss_dssp HHHCCSEEEEEEECCHHHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHH--CSCEEECSSCCSHHHHHHHHH
T ss_pred HHhcCCCEEEEecCcHHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHc--CCeEEEECCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999888889999999998877 569999999999999999999
Q ss_pred cCCCEEEEchHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHcCCCCHhhhcccceeccCCC
Q 021739 241 LGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNHIVTHWDT 301 (308)
Q Consensus 241 ~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~~~~~~~~~ 301 (308)
+|||+|++||++++++.+.|++++.++++.+++||+.+|.++|+++++++++..++..+.+
T Consensus 299 ~GAdaV~iGr~~l~~~~~~g~~~v~~~~~~l~~el~~~m~~~G~~~i~el~~~~l~~~g~~ 359 (380)
T 1p4c_A 299 LGAEAVLLGRATLYGLAARGETGVDEVLTLLKADIDRTLAQIGCPDITSLSPDYLQNEGVT 359 (380)
T ss_dssp TTCSCEEESHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGGEEEC---
T ss_pred hCCcHhhehHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCHHHhccCeEEecccc
Confidence 9999999999999987777899999999999999999999999999999999999887764
No 7
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=100.00 E-value=9.8e-40 Score=305.75 Aligned_cols=255 Identities=18% Similarity=0.281 Sum_probs=200.2
Q ss_pred CceeecCcccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCCCHHH-------HhccCCC-CceEEeeec
Q 021739 1 MTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEE-------VSSTGPG-IRFFQLYVT 72 (308)
Q Consensus 1 ~~t~~~g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~~e~-------i~~~~~~-~~~~Ql~~~ 72 (308)
|+|+|||++++.||+++||+|+...+++.|..++++|+++|+++++|+++.. +|+ +.+..|+ +.+..+...
T Consensus 76 ~st~i~g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~~-le~~~~~~~~v~r~~P~~~~ianig~~ 154 (365)
T 3sr7_A 76 LSTHFAGQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYSTA-LKNPDDTSYQVKKSRPHLLLATNIGLD 154 (365)
T ss_dssp CCEEETTEEESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC------------------------CCEEEEEETT
T ss_pred ceEEECCEEccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeeccccccc-ccCccccceEehhhCCCCcEEEEeCCC
Confidence 6899999999999999999999888888999999999999999999998742 222 1122232 445455432
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
...+ +..+.++..|++++.++++ ..|+.+++++|+++
T Consensus 155 ~~~e---~~~~~ve~~~adal~ihln----------------------------------------~~qe~~~p~Gd~~~ 191 (365)
T 3sr7_A 155 KPYQ---AGLQAVRDLQPLFLQVHIN----------------------------------------LMQELLMPEGEREF 191 (365)
T ss_dssp SCHH---HHHHHHHHHCCSCEEEEEC----------------------------------------HHHHHTSSSSCCCC
T ss_pred CCHH---HHHHHHHhcCCCEEEEecc----------------------------------------ccccccCCCCCCcH
Confidence 2222 4445566778888888764 23567777788888
Q ss_pred -CH-HHHHHHHHhcCCCEEEEec---CCHHHHHHHHHcCCcEEEEecccccCC---------------CCCcchHHHHHH
Q 021739 153 -NW-KDVKWLQTITSLPILVKGV---LTAEDASLAIQYGAAGIIVSNHGARQL---------------DYVPATVMALEE 212 (308)
Q Consensus 153 -~~-~~i~~ir~~~~~Pv~vK~~---~~~e~a~~~~~~G~d~i~v~~~gg~~~---------------~~~~~~~~~l~~ 212 (308)
.| +.|+++++.+++||++|++ .++++++.+.++|+|+|+++|+||+++ +++.++...|.+
T Consensus 192 ~~~~~~I~~l~~~~~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~ 271 (365)
T 3sr7_A 192 RSWKKHLSDYAKKLQLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLN 271 (365)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEECSSCCCHHHHHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCEEEEECCCCCCHHHHHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHHH
Confidence 56 7899999999999999988 799999999999999999999988764 567788888887
Q ss_pred HHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHcCCCCHhhhcc
Q 021739 213 VVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITR 292 (308)
Q Consensus 213 i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~ 292 (308)
+. .+..++|||++|||+++.|++|+|++|||+|++||+|++++.+.|++++.++++.+++||+.+|..+|+++++||++
T Consensus 272 v~-~~~~~ipvia~GGI~~g~Dv~KaLalGAdaV~ig~~~l~a~~~~G~~~v~~~l~~l~~eL~~~m~~~G~~si~eL~~ 350 (365)
T 3sr7_A 272 AQ-PLMDKVEILASGGIRHPLDIIKALVLGAKAVGLSRTMLELVEQHSVHEVIAIVNGWKEDLRLIMCALNCQTIAELRN 350 (365)
T ss_dssp HG-GGTTTSEEEECSSCCSHHHHHHHHHHTCSEEEESHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHTTCSSTGGGGG
T ss_pred HH-HhcCCCeEEEeCCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCcCHHHhcc
Confidence 64 44457999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred cceeccCC
Q 021739 293 NHIVTHWD 300 (308)
Q Consensus 293 ~~~~~~~~ 300 (308)
.++++.++
T Consensus 351 ~~~~~~~~ 358 (365)
T 3sr7_A 351 VDYLLYGR 358 (365)
T ss_dssp CCEEECHH
T ss_pred CCEEEccc
Confidence 99988765
No 8
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=100.00 E-value=9.1e-37 Score=286.51 Aligned_cols=255 Identities=22% Similarity=0.244 Sum_probs=206.1
Q ss_pred CceeecCcccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCC--------CHHHHhccCCC-CceEEeee
Q 021739 1 MTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATS--------SVEEVSSTGPG-IRFFQLYV 71 (308)
Q Consensus 1 ~~t~~~g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~--------~~e~i~~~~~~-~~~~Ql~~ 71 (308)
|+|+|||++++.||++|||+|+.....+.|..|+++|+++|+++++|++++. +.+-+.+..|+ +.+-++..
T Consensus 49 ~st~~~g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~~~s~~~vr~~ap~~~~~anlg~ 128 (368)
T 3vkj_A 49 TKTKFFRKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEARESFAIVRKVAPTIPIIANLGM 128 (368)
T ss_dssp CCEEETTEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGGSHHHHHHHHHCSSSCEEEEEEG
T ss_pred ceeEECCEeccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHHHhhHHHHHHhCcCcceecCcCe
Confidence 6899999999999999999998433345677899999999999999999432 11113333453 45545553
Q ss_pred ----c-CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhh
Q 021739 72 ----T-KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVAN 146 (308)
Q Consensus 72 ----~-~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (308)
+ .+.+...++++. .+.+++.|+++ ..++.+++
T Consensus 129 ~ql~~~~~~~~~~~av~~---~~a~al~Ihln----------------------------------------~~~~~~~p 165 (368)
T 3vkj_A 129 PQLVKGYGLKEFQDAIQM---IEADAIAVHLN----------------------------------------PAQEVFQP 165 (368)
T ss_dssp GGGGTTCCHHHHHHHHHH---TTCSEEEEECC----------------------------------------HHHHHHSS
T ss_pred eecCCCCCHHHHHHHHHH---hcCCCeEEEec----------------------------------------chhhhhCC
Confidence 3 455555555444 56777777753 23456667
Q ss_pred hcccccC---HHHHHHHHHhcCCCEEEEec---CCHHHHHHHHHcCCcEEEEeccccc---------C------------
Q 021739 147 QIDRSLN---WKDVKWLQTITSLPILVKGV---LTAEDASLAIQYGAAGIIVSNHGAR---------Q------------ 199 (308)
Q Consensus 147 ~~d~~~~---~~~i~~ir~~~~~Pv~vK~~---~~~e~a~~~~~~G~d~i~v~~~gg~---------~------------ 199 (308)
++++++. ++.|+++++.+++||++|++ .++++++.+.++|+|+|+|+||||+ +
T Consensus 166 ~g~~~~~~~~~~~i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~ 245 (368)
T 3vkj_A 166 EGEPEYQIYALEKLRDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAK 245 (368)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCSSCEEEECSSSCCCHHHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHH
T ss_pred CCCchhhHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhcc
Confidence 6777774 78899999999999999987 7999999999999999999999883 2
Q ss_pred --CCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHhcccCCHHHHHHHHHHHHHHHHH
Q 021739 200 --LDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFEL 277 (308)
Q Consensus 200 --~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~l~~ 277 (308)
.+++.|+...|.++++.+. ++|||++|||+++.|+.|++++|||+|++||||++++. .|++++.++++.+.+||+.
T Consensus 246 ~~~~~g~pt~~~l~~v~~~~~-~ipvia~GGI~~~~d~~kal~lGA~~v~ig~~~l~~~~-~G~~~v~~~l~~l~~eL~~ 323 (368)
T 3vkj_A 246 NFLDWGVPTAASIMEVRYSVP-DSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKSAI-EGKESLEQFFRKIIFELKA 323 (368)
T ss_dssp HTTTCSCBHHHHHHHHHHHST-TCEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHH-HCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccHHHHHHHHHHHcC-CCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHh-cChHHHHHHHHHHHHHHHH
Confidence 2346788888999887763 69999999999999999999999999999999999764 6899999999999999999
Q ss_pred HHHHcCCCCHhhhcccceeccCC
Q 021739 278 TMALSGCRSLKEITRNHIVTHWD 300 (308)
Q Consensus 278 ~m~~~G~~~i~~l~~~~~~~~~~ 300 (308)
+|..+|++++++|++.+++..++
T Consensus 324 ~m~~~G~~~i~el~~~~l~~~~~ 346 (368)
T 3vkj_A 324 AMMLTGSKDVDALKKTSIVILGK 346 (368)
T ss_dssp HHHHTTCCBHHHHHTCCEEECHH
T ss_pred HHHHhCCCCHHHhccCCEEechh
Confidence 99999999999999998887654
No 9
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=100.00 E-value=1.9e-36 Score=283.78 Aligned_cols=255 Identities=24% Similarity=0.325 Sum_probs=203.4
Q ss_pred CceeecCcccCCceEeccccCcc-cCCCHHHHHHHHHHHHcCCceeecCCCCCCHHH---------HhccCC-CCceEEe
Q 021739 1 MTTTVLGFNISMPIMIAPTAFQK-MAHPEGECATARAASAAGTIMTLSSWATSSVEE---------VSSTGP-GIRFFQL 69 (308)
Q Consensus 1 ~~t~~~g~~~~~Pi~iapm~~~~-~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~~e~---------i~~~~~-~~~~~Ql 69 (308)
|+|+|+|.++++||++|||+|.. ..++++|.+++++|.++|+++++|++++. +++ +....+ .|.+.|+
T Consensus 45 ~~~~i~g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~pv~~~i 123 (349)
T 1p0k_A 45 ISTKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSA-LKDPSERLSYEIVRKENPNGLIFANL 123 (349)
T ss_dssp CCEEETTEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCEECCCCTTT-TTCHHHHHHHHHHHHHCSSSCEEEEE
T ss_pred ceeEECCcccCCceEEcCccccchhhhhHHHHHHHHHHHHcCCcEEeccchhc-ccCcccccceehhhhhCCCceeEEee
Confidence 68999999999999999997753 33355688999999999999999998654 322 122223 3788898
Q ss_pred eecCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcc
Q 021739 70 YVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQID 149 (308)
Q Consensus 70 ~~~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 149 (308)
..+.+.+...+ .++..|+++|.+|++||... +++..+
T Consensus 124 ~~~~~~~~~~~---~~~~~gad~i~i~~~~~~~~----------------------------------------~~~~~~ 160 (349)
T 1p0k_A 124 GSEATAAQAKE---AVEMIGANALQIHLNVIQEI----------------------------------------VMPEGD 160 (349)
T ss_dssp ETTCCHHHHHH---HHHHTTCSEEEEEECTTTTC----------------------------------------------
T ss_pred cCCCCHHHHHH---HHHhcCCCeEEecccchhhh----------------------------------------cCCCCC
Confidence 85556665544 35568999999999997420 011124
Q ss_pred ccc--CHHHHHHHHHhcCCCEEEEec---CCHHHHHHHHHcCCcEEEEeccccc---------C-------CCCCcchHH
Q 021739 150 RSL--NWKDVKWLQTITSLPILVKGV---LTAEDASLAIQYGAAGIIVSNHGAR---------Q-------LDYVPATVM 208 (308)
Q Consensus 150 ~~~--~~~~i~~ir~~~~~Pv~vK~~---~~~e~a~~~~~~G~d~i~v~~~gg~---------~-------~~~~~~~~~ 208 (308)
+++ .++.++++|+.+++||++|++ .+.++++.+.++|+|+|+++||||+ + .+++++++.
T Consensus 161 ~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~ 240 (349)
T 1p0k_A 161 RSFSGALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAA 240 (349)
T ss_dssp --CTTHHHHHHHHHHHCSSCEEEEEESSCCCHHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHH
T ss_pred cchHHHHHHHHHHHHHcCCCEEEEecCCCCCHHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHH
Confidence 444 368899999999999999986 7899999999999999999999873 2 356778888
Q ss_pred HHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHcCCCCHh
Q 021739 209 ALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLK 288 (308)
Q Consensus 209 ~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~l~~~m~~~G~~~i~ 288 (308)
.|.++++.+ .++|||++|||++++|+.+++++|||+|++||+|++...+.|++++.++++.++++|+.+|..+|+.++.
T Consensus 241 ~l~~v~~~~-~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG~~~l~~~~~~g~~~~~~~~~~~~~~l~~~m~~~G~~~i~ 319 (349)
T 1p0k_A 241 SLAEIRSEF-PASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEGLLEEIQLILEELKLIMTVLGARTIA 319 (349)
T ss_dssp HHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBHH
T ss_pred HHHHHHHhc-CCCeEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhCCCCHH
Confidence 999888765 5799999999999999999999999999999999998766788899999999999999999999999999
Q ss_pred hhcccceeccCC
Q 021739 289 EITRNHIVTHWD 300 (308)
Q Consensus 289 ~l~~~~~~~~~~ 300 (308)
++++.+++..++
T Consensus 320 el~~~~~~~~~~ 331 (349)
T 1p0k_A 320 DLQKAPLVIKGE 331 (349)
T ss_dssp HHTTCCEEECHH
T ss_pred HHhhCCeeccHH
Confidence 999998886543
No 10
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=100.00 E-value=2.7e-35 Score=274.16 Aligned_cols=242 Identities=28% Similarity=0.284 Sum_probs=191.4
Q ss_pred CceeecCcccCCceEeccccCcccCCCH---HHHHHHHHHHHcCCceeecCCCCCCHHH--------HhccCCC-Cce--
Q 021739 1 MTTTVLGFNISMPIMIAPTAFQKMAHPE---GECATARAASAAGTIMTLSSWATSSVEE--------VSSTGPG-IRF-- 66 (308)
Q Consensus 1 ~~t~~~g~~~~~Pi~iapm~~~~~~~~~---~~~~~a~~a~~~g~~~~~s~~~~~~~e~--------i~~~~~~-~~~-- 66 (308)
|+|+|+|+++++||++|||+++ ++. .+.+++++|+++|+++++|++++. +++ +....++ +.+
T Consensus 48 ~~~~i~g~~l~~P~~iapm~g~---~~~~~~~~~~la~~a~~~G~~~~~~~~~~~-le~~~~~~~~ql~~~~~d~pv~~~ 123 (332)
T 1vcf_A 48 LTTPFLGKTLKAPFLIGAMTGG---EENGERINLALAEAAEALGVGMMLGSGRIL-LERPEALRSFRVRKVAPKALLIAN 123 (332)
T ss_dssp CCEEETTEEESSSEEECCCC------CCHHHHHHHHHHHHHHHTCEEEEEECHHH-HHCTTTHHHHCCTTTCSSSCEEEE
T ss_pred cceEECCcccCCceEEeccccC---CcchhHHHHHHHHHHHHcCCCEEeCCchhc-ccCCCccceEEeeccCCCceeecc
Confidence 6899999999999999999975 443 347999999999999999999654 443 1111111 332
Q ss_pred ---EEeeecCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhH
Q 021739 67 ---FQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASY 143 (308)
Q Consensus 67 ---~Ql~~~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~ 143 (308)
.|++ +.++++..++++ ..+++++.+++++. +++
T Consensus 124 ~~~~q~~-~~~~~~~~~a~~---~~~~~a~~i~~n~~----------------------------------------~~~ 159 (332)
T 1vcf_A 124 LGLAQLR-RYGRDDLLRLVE---MLEADALAFHVNPL----------------------------------------QEA 159 (332)
T ss_dssp EEGGGGG-TCCHHHHHHHHH---HHTCSEEEEECCHH----------------------------------------HHH
T ss_pred cChhhhh-ccChHHHHHHHh---hcCCCceeeccchH----------------------------------------HHH
Confidence 3333 345565555544 35678777776421 122
Q ss_pred hhhhccccc--CHHHHHHHHHhcCCCEEEEec---CCHHHHHHHHHcCCcEEEEecccc---------cC---------C
Q 021739 144 VANQIDRSL--NWKDVKWLQTITSLPILVKGV---LTAEDASLAIQYGAAGIIVSNHGA---------RQ---------L 200 (308)
Q Consensus 144 ~~~~~d~~~--~~~~i~~ir~~~~~Pv~vK~~---~~~e~a~~~~~~G~d~i~v~~~gg---------~~---------~ 200 (308)
++ ..++++ .++.++++|+ +++||++|++ .++++++.+.++|+|+|+++||+| ++ .
T Consensus 160 ~~-~~~~~~~~~~~~i~~vr~-~~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~ 237 (332)
T 1vcf_A 160 VQ-RGDTDFRGLVERLAELLP-LPFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELC 237 (332)
T ss_dssp HT-TSCCCCTTHHHHHHHHCS-CSSCEEEECSSSCCCHHHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCT
T ss_pred hc-CCCccHHHHHHHHHHHHc-CCCCEEEEecCCCCCHHHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHh
Confidence 22 233433 4789999999 9999999987 899999999999999999999987 43 5
Q ss_pred CCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Q 021739 201 DYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMA 280 (308)
Q Consensus 201 ~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~l~~~m~ 280 (308)
+++++++..+.++++.+. ++|||++|||+++.|+.|+|++|||+|++||+|++++ +.|++++.++++.+++||+.+|.
T Consensus 238 ~~g~~~~~~l~~v~~~~~-~ipvia~GGI~~~~d~~kal~~GAd~V~igr~~l~~~-~~G~~gv~~~~~~l~~el~~~m~ 315 (332)
T 1vcf_A 238 EIGIPTARAILEVREVLP-HLPLVASGGVYTGTDGAKALALGADLLAVARPLLRPA-LEGAERVAAWIGDYLEELRTALF 315 (332)
T ss_dssp TCSCBHHHHHHHHHHHCS-SSCEEEESSCCSHHHHHHHHHHTCSEEEECGGGHHHH-TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred hccccHHHHHHHHHHhcC-CCeEEEECCCCCHHHHHHHHHhCCChHhhhHHHHHHH-hccHHHHHHHHHHHHHHHHHHHH
Confidence 677889999999988764 6999999999999999999999999999999999987 78999999999999999999999
Q ss_pred HcCCCCHhhhcccc
Q 021739 281 LSGCRSLKEITRNH 294 (308)
Q Consensus 281 ~~G~~~i~~l~~~~ 294 (308)
.+|+++++||++..
T Consensus 316 ~~G~~~i~el~~~~ 329 (332)
T 1vcf_A 316 AIGARNPKEARGRV 329 (332)
T ss_dssp HHTCSSGGGGTTCE
T ss_pred HhCCCCHHHHhhhh
Confidence 99999999998864
No 11
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.97 E-value=2.2e-31 Score=253.11 Aligned_cols=270 Identities=18% Similarity=0.239 Sum_probs=191.6
Q ss_pred CceeecCcccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCC--------CCCCHHHHhccCC-------CCc
Q 021739 1 MTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSW--------ATSSVEEVSSTGP-------GIR 65 (308)
Q Consensus 1 ~~t~~~g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~--------~~~~~e~i~~~~~-------~~~ 65 (308)
|+|+|+|.+++.||++|||++. +++ .+++++.+.|.+.++++. ...++|++++..+ .+.
T Consensus 57 lst~l~g~~l~~Pii~Apm~g~--~~~----~~a~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~~d~~~g~~~ 130 (393)
T 2qr6_A 57 TTWHIDAYKFDLPFMNHPSDAL--ASP----EFVIEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEEGDQAAATRT 130 (393)
T ss_dssp CCEEETTEEESSSEEECCCTTT--CCH----HHHHHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEcccccCCCeEeCCCCCc--ccH----HHHHHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHhcCCCccchh
Confidence 6899999999999999999954 765 799999999999999862 2234566654322 256
Q ss_pred eEEeeecC-CchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCch-hhhH
Q 021739 66 FFQLYVTK-HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSG-LASY 143 (308)
Q Consensus 66 ~~Ql~~~~-d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~-~~~~ 143 (308)
|+|+|... |++.+.++++++++.|+..+. .+. | .+..+....+. ...++.+... ++. .+++
T Consensus 131 ~~q~~~~~~d~~~~~~~i~~~~~~g~~v~~-~v~-~---~~~~e~a~~~~-----------~agad~i~i~-~~~~~~~~ 193 (393)
T 2qr6_A 131 LQELHAAPLDTELLSERIAQVRDSGEIVAV-RVS-P---QNVREIAPIVI-----------KAGADLLVIQ-GTLISAEH 193 (393)
T ss_dssp HHHHHHSCCCHHHHHHHHHHHHHTTSCCEE-EEC-T---TTHHHHHHHHH-----------HTTCSEEEEE-CSSCCSSC
T ss_pred hhhcccccCCHHHHHHHHHHHhhcCCeEEE-EeC-C---ccHHHHHHHHH-----------HCCCCEEEEe-CCcccccc
Confidence 88988544 899999999999999887653 332 2 23333222110 0011111100 000 0111
Q ss_pred hhhhcccccCHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEec--ccccCCC-CCcchHHHHHHHHHH----
Q 021739 144 VANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSN--HGARQLD-YVPATVMALEEVVQA---- 216 (308)
Q Consensus 144 ~~~~~d~~~~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~--~gg~~~~-~~~~~~~~l~~i~~~---- 216 (308)
..+...|+.++++++.+++||++|++.++++++.+.++|+|+|.+++ |++++.+ ++++++..+.++++.
T Consensus 194 ----~~~~~~~~~i~~l~~~~~~pvi~ggi~t~e~a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~ 269 (393)
T 2qr6_A 194 ----VNTGGEALNLKEFIGSLDVPVIAGGVNDYTTALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDY 269 (393)
T ss_dssp ----CCC-----CHHHHHHHCSSCEEEECCCSHHHHHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHH
T ss_pred ----CCCcccHHHHHHHHHhcCCCEEECCcCCHHHHHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHh
Confidence 12334677899999999999999999999999999999999999966 3333333 357889999888776
Q ss_pred ---ccCC-CeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHh-----------cccCCH---H--------------HH
Q 021739 217 ---AKGR-VPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS-----------LAVDGE---A--------------GV 264 (308)
Q Consensus 217 ---~~~~-ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~-----------~~~~G~---~--------------~v 264 (308)
+..+ +|||++|||+++.|+.|++++|||+|++||+|+.. +.+.|. + .+
T Consensus 270 ~~~~~~~~ipvia~GGI~~~~dv~kalalGA~~V~iG~~~l~~~es~~~~~~~g~~~~~~~~~~Gv~~~~~~~~~~~~~~ 349 (393)
T 2qr6_A 270 LDETGGRYVHIIADGSIENSGDVVKAIACGADAVVLGSPLARAEEAAGKGYFWPAVAAHPRFPRGVVTESVDLDEAAPSL 349 (393)
T ss_dssp HHHHTSCCCEEEECSSCCSHHHHHHHHHHTCSEEEECGGGGGSTTCTTTTEECCGGGGCSSSCCCCCEECC----CCCCH
T ss_pred HhhcCCcceEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCCCCCCceEEEecccCcccCCCccccccccccccchhH
Confidence 4333 99999999999999999999999999999997543 322221 1 12
Q ss_pred HHHH----------HHHHHHHHHHHHHcCCCCHhhhcccceec
Q 021739 265 RKVL----------QMLRDEFELTMALSGCRSLKEITRNHIVT 297 (308)
Q Consensus 265 ~~~i----------~~l~~~l~~~m~~~G~~~i~~l~~~~~~~ 297 (308)
.+++ ..+++||+..|.++|+++++||++.++++
T Consensus 350 ~~~~~g~~~~~~~~~~l~~el~~~m~~~G~~~i~el~~~~~~~ 392 (393)
T 2qr6_A 350 EQILHGPSTMPWGVENFEGGLKRALAKCGYTDLKSFQKVSLHV 392 (393)
T ss_dssp HHHHHCCCSCTTSSSCHHHHHHHHHHHHTCSBHHHHTTCCEEE
T ss_pred HHHhccchhHHHHHHHHHHHHHHHHHHhCCCCHHHHhhccEec
Confidence 3333 36789999999999999999999988765
No 12
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.97 E-value=1.1e-29 Score=236.69 Aligned_cols=239 Identities=17% Similarity=0.192 Sum_probs=173.9
Q ss_pred CceeecCcccCCceEeccccCcccCCCHHHHHHHHH-HHHcCCceeecCCCCCCHHHHhccC-CC-CceEEeeecCCchH
Q 021739 1 MTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARA-ASAAGTIMTLSSWATSSVEEVSSTG-PG-IRFFQLYVTKHRNV 77 (308)
Q Consensus 1 ~~t~~~g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~-a~~~g~~~~~s~~~~~~~e~i~~~~-~~-~~~~Ql~~~~d~~~ 77 (308)
|+|+|+|++++.||++|||++. + +..++++ ++..|+.+.++++.....+.+.... .+ +..+|+ +.+++.
T Consensus 36 l~t~i~g~~l~~Pi~~a~mag~--s----~~~la~a~~~~gg~g~~~~~~~~~~~~~i~~~~~~g~~v~v~~--g~~~~~ 107 (336)
T 1ypf_A 36 TTVTLGKHKFKLPVVPANMQTI--I----DERIATYLAENNYFYIMHRFQPEKRISFIRDMQSRGLIASISV--GVKEDE 107 (336)
T ss_dssp CCEEETTEEESSSEEECSSTTT--C----CHHHHHHHHHTTCCCCCCCSSGGGHHHHHHHHHHTTCCCEEEE--CCSHHH
T ss_pred ceEEECCEEecCcEEECCCCCC--C----hHHHHHHHHhCCCEEEecCCCCHHHHHHHHHHHhcCCeEEEeC--CCCHHH
Confidence 6899999999999999999986 5 3467664 5556666666554322211222111 12 456663 444443
Q ss_pred HHHHHHHHHHcC--CcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHH
Q 021739 78 DAQLVKRAERAG--FKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWK 155 (308)
Q Consensus 78 ~~~~~~~~~~~g--~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 155 (308)
. +.++.+.+.| ++++.+|+. . +++...|+
T Consensus 108 ~-~~a~~~~~~g~~~~~i~i~~~---~---------------------------------------------G~~~~~~~ 138 (336)
T 1ypf_A 108 Y-EFVQQLAAEHLTPEYITIDIA---H---------------------------------------------GHSNAVIN 138 (336)
T ss_dssp H-HHHHHHHHTTCCCSEEEEECS---S---------------------------------------------CCSHHHHH
T ss_pred H-HHHHHHHhcCCCCCEEEEECC---C---------------------------------------------CCcHHHHH
Confidence 3 3455666677 777766531 0 13344578
Q ss_pred HHHHHHHhcCCCEEEEe-cCCHHHHHHHHHcCCcEEEEecccccCCC------CCcc--hHHHHHHHHHHccCCCeEEEe
Q 021739 156 DVKWLQTITSLPILVKG-VLTAEDASLAIQYGAAGIIVSNHGARQLD------YVPA--TVMALEEVVQAAKGRVPVFLD 226 (308)
Q Consensus 156 ~i~~ir~~~~~Pv~vK~-~~~~e~a~~~~~~G~d~i~v~~~gg~~~~------~~~~--~~~~l~~i~~~~~~~ipvia~ 226 (308)
.|+++|+.++.|+++|+ +.+.++++.+.++|+|+|+++||+|++.+ .+.+ ++..+.++++.+ ++|||++
T Consensus 139 ~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~--~ipVIa~ 216 (336)
T 1ypf_A 139 MIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAA--SKPIIAD 216 (336)
T ss_dssp HHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTC--SSCEEEE
T ss_pred HHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHc--CCcEEEe
Confidence 99999999976666677 78999999999999999999999987543 3344 688889998776 8999999
Q ss_pred cCCCCHHHHHHHHHcCCCEEEEchHHH--------------------HhcccCCHHHHH-----------------HHHH
Q 021739 227 GGVRRGTDVFKALALGASGVFVGRPVP--------------------FSLAVDGEAGVR-----------------KVLQ 269 (308)
Q Consensus 227 GGI~~~~d~~k~l~~GAd~V~ig~~~l--------------------~~~~~~G~~~v~-----------------~~i~ 269 (308)
|||+++.|+.|++++|||+|++||+|+ +++++.|++++. ++++
T Consensus 217 GGI~~g~Dv~kalalGAdaV~iGr~~l~t~Es~~~~~~~~g~~~k~~~g~~~~~~~g~~~~~~g~~~~~~~~g~~~~~~~ 296 (336)
T 1ypf_A 217 GGIRTNGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKEYFGSASEFQKGEKKNVEGKKMFVEHKGSLEDTLI 296 (336)
T ss_dssp SCCCSTHHHHHHHHTTCSEEEESGGGTTCTTSSSCCC-----------------------CTTSCCSSSSCCCCHHHHHH
T ss_pred CCCCCHHHHHHHHHcCCCEEEeChhhhccccCCCceeeeCCeEeeeeecccchhhccCccccccceeeecccccHHHHHH
Confidence 999999999999999999999999999 677666666554 8999
Q ss_pred HHHHHHHHHHHHcCCCCHhhhcccceecc
Q 021739 270 MLRDEFELTMALSGCRSLKEITRNHIVTH 298 (308)
Q Consensus 270 ~l~~~l~~~m~~~G~~~i~~l~~~~~~~~ 298 (308)
.+++||+..|.++|+++++||++..++..
T Consensus 297 ~l~~el~~~m~~~G~~~i~el~~~~~~~~ 325 (336)
T 1ypf_A 297 EMEQDLQSSISYAGGTKLDSIRTVDYVVV 325 (336)
T ss_dssp HHHHHHHHHHHHTTSSBGGGGGGCCEEEC
T ss_pred HHHHHHHHHHHHhCcccHHHhCcCCEEEE
Confidence 99999999999999999999998877764
No 13
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.96 E-value=8.7e-29 Score=230.74 Aligned_cols=233 Identities=19% Similarity=0.231 Sum_probs=185.9
Q ss_pred ceeecCcccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCCCHHHHhccCCCCceEEeeecCCchHHHHH
Q 021739 2 TTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQL 81 (308)
Q Consensus 2 ~t~~~g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~~e~i~~~~~~~~~~Ql~~~~d~~~~~~~ 81 (308)
+|+|+|.+++.||++|||... + +..+|+++.++|...++++. .++|++.+......|+|.+...+++...+.
T Consensus 33 ~t~l~g~~l~~Pii~ApM~~v--t----e~~lA~A~a~~Gg~gvi~~~--~s~ee~~~~i~~~~~~~~~~~g~~~~~~e~ 104 (361)
T 3r2g_A 33 TDRLGKLTLNLPVISANMDTI--T----ESNMANFMHSKGAMGALHRF--MTIEENIQEFKKCKGPVFVSVGCTENELQR 104 (361)
T ss_dssp ECTTSSCEESSCEEECCSTTT--C----SHHHHHHHHHTTCEEBCCSC--SCHHHHHHHHHTCCSCCBEEECSSHHHHHH
T ss_pred eEEECCEEcCCCEEECCCCCc--h----HHHHHHHHHHcCCCEEEeCC--CCHHHHHHHHhhcceEEEEEcCCCHHHHHH
Confidence 458999999999999999543 3 77999999999999999854 688887755334456777766777888889
Q ss_pred HHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHH
Q 021739 82 VKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQ 161 (308)
Q Consensus 82 ~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir 161 (308)
++++.++|++.|.++. +.. .+...|+.|+++|
T Consensus 105 ~~~a~~aGvdvI~id~--a~G----------------------------------------------~~~~~~e~I~~ir 136 (361)
T 3r2g_A 105 AEALRDAGADFFCVDV--AHA----------------------------------------------HAKYVGKTLKSLR 136 (361)
T ss_dssp HHHHHHTTCCEEEEEC--SCC----------------------------------------------SSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEeC--CCC----------------------------------------------CcHhHHHHHHHHH
Confidence 9999999999776653 210 0112367899999
Q ss_pred Hhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCC------CCCcchHHHHHHHHHHccCCCeEEEecCCCCHHH
Q 021739 162 TIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQL------DYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTD 234 (308)
Q Consensus 162 ~~~-~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~------~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d 234 (308)
+.+ ++||++|.+.++++++.+.++|+|+|.+++++|+.. ..+.+.+..+.++++.. . |||++|||+++.|
T Consensus 137 ~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~--~-PVIAdGGI~~~~d 213 (361)
T 3r2g_A 137 QLLGSRCIMAGNVATYAGADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCSRAD--R-SIVADGGIKTSGD 213 (361)
T ss_dssp HHHTTCEEEEEEECSHHHHHHHHHTTCSEEEECCSSSSCHHHHHHHCCCCCHHHHHHHHTTSS--S-EEEEESCCCSHHH
T ss_pred HhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEEcCCCCcCccccccCCccHHHHHHHHHHHHhC--C-CEEEECCCCCHHH
Confidence 987 799999999999999999999999999988876542 12456777777775543 2 9999999999999
Q ss_pred HHHHHHcCCCEEEEchHHHHhcc-------c-------------------------------CCH-------HHHHHHHH
Q 021739 235 VFKALALGASGVFVGRPVPFSLA-------V-------------------------------DGE-------AGVRKVLQ 269 (308)
Q Consensus 235 ~~k~l~~GAd~V~ig~~~l~~~~-------~-------------------------------~G~-------~~v~~~i~ 269 (308)
+.++|++|||+|++||+|+.... . +|. ..+.+++.
T Consensus 214 i~kALa~GAd~V~iGr~f~~t~Espg~~~~~~~g~~~k~y~Gm~s~~~~~~~~~~~~~~~~~eG~~~~v~~~g~~~~~~~ 293 (361)
T 3r2g_A 214 IVKALAFGADFVMIGGMLAGSAPTPGEVFQKDDGSKVKRYRGMASREAQEAFLGQMHEWKTAEGVATEVPFKENPDGIIA 293 (361)
T ss_dssp HHHHHHTTCSEEEESGGGTTBTTSSSCEEECTTSCEEEEESCCHHHHHHHHHTTCCSTTCCSCCCCEEEECBCCHHHHHH
T ss_pred HHHHHHcCCCEEEEChHHhCCccCCceeEEecCCeEEEEEecCCCcchhhhhhccccccccCCcceeecCCCCCHHHHHH
Confidence 99999999999999999974311 0 110 13789999
Q ss_pred HHHHHHHHHHHHcCCCCHhhhccc
Q 021739 270 MLRDEFELTMALSGCRSLKEITRN 293 (308)
Q Consensus 270 ~l~~~l~~~m~~~G~~~i~~l~~~ 293 (308)
.+..+|+..|.++|+.+|+||+++
T Consensus 294 ~~~~glr~~m~y~G~~~i~~l~~~ 317 (361)
T 3r2g_A 294 DIIGGLRSGLTYAGADSISELQRK 317 (361)
T ss_dssp HHHHHHHHHHHHTTCSSHHHHHHT
T ss_pred HHHHHHHHHhhhcCcccHHHHHhC
Confidence 999999999999999999999665
No 14
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=99.95 E-value=2.6e-27 Score=221.45 Aligned_cols=236 Identities=19% Similarity=0.140 Sum_probs=176.9
Q ss_pred Cceeec-----CcccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCCCHHHHhcc---CCC---CceEEe
Q 021739 1 MTTTVL-----GFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSST---GPG---IRFFQL 69 (308)
Q Consensus 1 ~~t~~~-----g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~~e~i~~~---~~~---~~~~Ql 69 (308)
|+|+|+ +.+++.||++|||++. + +..+++++.+.|...+++. +.++++.... .+. .....+
T Consensus 42 l~t~l~~~~~~~~~l~~PIi~ApM~~~--~----~~~lA~Ava~~Gglg~i~~--~~s~e~~~~~i~~~p~~l~~v~~~~ 113 (351)
T 2c6q_A 42 LTRSFSFRNSKQTYSGVPIIAANMDTV--G----TFEMAKVLCKFSLFTAVHK--HYSLVQWQEFAGQNPDCLEHLAASS 113 (351)
T ss_dssp CCEEEECTTTCCEEEECCEEECSSTTT--S----CHHHHHHHHHTTCEEECCT--TCCHHHHHHHHHHCGGGCTTEEEEE
T ss_pred eEEEeccccCcCccccCCEEECCCCCC--C----cHHHHHHHHHCCCEEEEcC--CCCHHHHHHHHhhCchhhheeEeec
Confidence 689998 9999999999999875 4 4689999999998777763 4566665432 221 122222
Q ss_pred eecCCchHHHHHHHHHHHc--CCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhh
Q 021739 70 YVTKHRNVDAQLVKRAERA--GFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQ 147 (308)
Q Consensus 70 ~~~~d~~~~~~~~~~~~~~--g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (308)
+.+.+..+ .++.+.+. |++++.++...
T Consensus 114 --g~~~~~~~-~~~~l~~~~~g~~~i~i~~~~------------------------------------------------ 142 (351)
T 2c6q_A 114 --GTGSSDFE-QLEQILEAIPQVKYICLDVAN------------------------------------------------ 142 (351)
T ss_dssp --CSSHHHHH-HHHHHHHHCTTCCEEEEECSC------------------------------------------------
T ss_pred --CCChHHHH-HHHHHHhccCCCCEEEEEecC------------------------------------------------
Confidence 33333333 33333343 77776665310
Q ss_pred cccccCHHHHHHHHHhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEeccccc-----CC-CCCcchHHHHHHHHHHcc-C
Q 021739 148 IDRSLNWKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGAR-----QL-DYVPATVMALEEVVQAAK-G 219 (308)
Q Consensus 148 ~d~~~~~~~i~~ir~~~-~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~-----~~-~~~~~~~~~l~~i~~~~~-~ 219 (308)
+++...|+.|+++|+.+ ++||++|.+.+.++++.+.++|+|+|.+++++|. +. .++.++...+.++.+... .
T Consensus 143 g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~ 222 (351)
T 2c6q_A 143 GYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGL 222 (351)
T ss_dssp TTBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhc
Confidence 12223478899999998 8999999999999999999999999999877652 11 124677788877766543 2
Q ss_pred CCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHH--------------------HhcccCC--------------HHH--
Q 021739 220 RVPVFLDGGVRRGTDVFKALALGASGVFVGRPVP--------------------FSLAVDG--------------EAG-- 263 (308)
Q Consensus 220 ~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l--------------------~~~~~~G--------------~~~-- 263 (308)
++|||++|||+++.|+.|+|++|||+|++|++|+ |++++.| +++
T Consensus 223 ~ipvIa~GGI~~g~di~kAlalGA~~V~vG~~fl~~~Es~~~~~~~~g~~~k~~~g~~~~~a~~~~~g~~~~~~~~~g~~ 302 (351)
T 2c6q_A 223 KGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAGGVAEYRASEGKT 302 (351)
T ss_dssp TCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSCSCEEEETTEEEEEEECTTBHHHHHHHSSSCCTTCCCCBCE
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCCCceeccHHHhcCccCcchhhhhcCeeeeeccccccHhhhhcccccccccccccceE
Confidence 6999999999999999999999999999999998 4443322 255
Q ss_pred --------HHHHHHHHHHHHHHHHHHcCCCCHhhhcccce
Q 021739 264 --------VRKVLQMLRDEFELTMALSGCRSLKEITRNHI 295 (308)
Q Consensus 264 --------v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~~~ 295 (308)
+.++++.|+.||+..|.++|+++++||++...
T Consensus 303 ~~~~~~g~v~~~~~~l~~~l~~~m~~~G~~~i~~l~~~~~ 342 (351)
T 2c6q_A 303 VEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTT 342 (351)
T ss_dssp EEEECCBCHHHHHHHHHHHHHHHHHHHTCSBGGGHHHHCC
T ss_pred EEeeccCcHHHHHHHHHHHHHHHHHHcCCCCHHHHhhCCc
Confidence 99999999999999999999999999987643
No 15
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.94 E-value=1.8e-25 Score=205.98 Aligned_cols=241 Identities=18% Similarity=0.203 Sum_probs=183.6
Q ss_pred CceeecCcccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCC-C--------------------------
Q 021739 1 MTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATS-S-------------------------- 53 (308)
Q Consensus 1 ~~t~~~g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~-~-------------------------- 53 (308)
|+|+++|.++++||++||... +. +..+++.+.+.|++++++.+.+. +
T Consensus 2 l~~~i~g~~l~npv~~Aag~~----~~--~~~~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g 75 (311)
T 1jub_A 2 LNTTFANAKFANPFMNASGVH----CM--TIEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLG 75 (311)
T ss_dssp CCEEETTEEESSSEEECTTSS----CS--SHHHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSC
T ss_pred CceEECCEEcCCCcEECCCCC----CC--CHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcc
Confidence 689999999999999997331 22 45778899999999988754211 1
Q ss_pred H----HHHhc---cC--CCCceEEeeecCCchHHHHHHHHHHHcCCc-EEEEecCCCCCCcchHHhhhccCCCCcccccc
Q 021739 54 V----EEVSS---TG--PGIRFFQLYVTKHRNVDAQLVKRAERAGFK-AIALTVDTPRLGRREADIKNRFVLPPHLTLKN 123 (308)
Q Consensus 54 ~----e~i~~---~~--~~~~~~Ql~~~~d~~~~~~~~~~~~~~g~~-~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~ 123 (308)
. +++.. .. ..+.++|+. +.+.+.+.+.++++++.|++ +|++|++||.. .+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~p~~~~i~-g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~-~g~----------------- 136 (311)
T 1jub_A 76 FDYYLDYVLKNQKENAQEGPIFFSIA-GMSAAENIAMLKKIQESDFSGITELNLSCPNV-PGE----------------- 136 (311)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCEEEEC-CSSHHHHHHHHHHHHHSCCCSEEEEESCCCCS-SSC-----------------
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEcC-CCCHHHHHHHHHHHHhcCCCeEEEEeccCCCC-CCc-----------------
Confidence 1 22221 12 347889997 78889999999999999999 99999999964 100
Q ss_pred ccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhcCCCEEEEecC--CHHH----HHHHHHcCCcEEEEecccc
Q 021739 124 YEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL--TAED----ASLAIQYGAAGIIVSNHGA 197 (308)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~~~Pv~vK~~~--~~e~----a~~~~~~G~d~i~v~~~gg 197 (308)
. .++ .+++..++.++++|+.+++||++|+.. +.++ ++.+.++|+|+|+++|+.+
T Consensus 137 --------------~----~~g--~~~e~~~~iv~~vr~~~~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~ 196 (311)
T 1jub_A 137 --------------P----QLA--YDFEATEKLLKEVFTFFTKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIG 196 (311)
T ss_dssp --------------C----CGG--GCHHHHHHHHHHHTTTCCSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEE
T ss_pred --------------c----ccc--CCHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCCCC
Confidence 0 011 244455789999999889999999874 3332 7888999999999988641
Q ss_pred --cCCC-----------------CCc----chHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 021739 198 --RQLD-----------------YVP----ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 198 --~~~~-----------------~~~----~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
...+ .++ ..+..+.++++.+.+++|||++|||++++|+.+++++|||+|++||++++
T Consensus 197 ~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~~~l~ 276 (311)
T 1jub_A 197 NGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHK 276 (311)
T ss_dssp EEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred cCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchHHHh
Confidence 1110 021 13566777776665579999999999999999999999999999999997
Q ss_pred hcccCCHHHHHHHHHHHHHHHHHHHHHcCCCCHhhhcccc
Q 021739 255 SLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNH 294 (308)
Q Consensus 255 ~~~~~G~~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~~ 294 (308)
. |+ .+++.++++++.+|...|+++++|+++..
T Consensus 277 ~----~p----~~~~~i~~~l~~~l~~~g~~si~e~~g~~ 308 (311)
T 1jub_A 277 E----GP----AIFDRIIKELEEIMNQKGYQSIADFHGKL 308 (311)
T ss_dssp H----CT----HHHHHHHHHHHHHHHHHTCCSGGGTTTCC
T ss_pred c----Cc----HHHHHHHHHHHHHHHHcCCCCHHHHhChh
Confidence 2 44 47889999999999999999999998763
No 16
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.94 E-value=6.8e-26 Score=209.08 Aligned_cols=240 Identities=20% Similarity=0.213 Sum_probs=182.6
Q ss_pred CceeecCcccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCC-C--------------------------C
Q 021739 1 MTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWAT-S--------------------------S 53 (308)
Q Consensus 1 ~~t~~~g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~-~--------------------------~ 53 (308)
|+|+|+|.++++||++||+..+ . +..+.+.+.+.|++++++.+.+ . .
T Consensus 4 l~~~i~g~~l~nPi~~Aag~~~----~--~~~~~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g 77 (314)
T 2e6f_A 4 LKLNLLDHVFANPFMNAAGVLC----S--TEEDLRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLG 77 (314)
T ss_dssp CCEEETTEEESSSEEECTTSSC----S--SHHHHHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSC
T ss_pred cceEECCEecCCCcEECCCCCC----C--CHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcC
Confidence 6899999999999999986522 1 3355677899999987764311 1 1
Q ss_pred H----HHHhcc-C-C-CCceEEeeecCCchHHHHHHHHHHHcCCc---EEEEecCCCCCCcchHHhhhccCCCCcccccc
Q 021739 54 V----EEVSST-G-P-GIRFFQLYVTKHRNVDAQLVKRAERAGFK---AIALTVDTPRLGRREADIKNRFVLPPHLTLKN 123 (308)
Q Consensus 54 ~----e~i~~~-~-~-~~~~~Ql~~~~d~~~~~~~~~~~~~~g~~---~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~ 123 (308)
. +++... . + .+.+.|+. +.+.+.+.+.++++.+.|++ +|++|+.||.. .+.
T Consensus 78 ~~~~~~~~~~~~~~~~~p~~~~i~-g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~-~g~----------------- 138 (314)
T 2e6f_A 78 FDFYLKYASDLHDYSKKPLFLSIS-GLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNV-PGK----------------- 138 (314)
T ss_dssp HHHHHHHHHHTCCTTTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCS-TTC-----------------
T ss_pred HHHHHHHHHHHhhcCCCcEEEEeC-CCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCC-CCc-----------------
Confidence 1 223322 2 2 37888997 77889999999999999999 99999999964 100
Q ss_pred ccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhcCCCEEEEecC--CHHH----HHHHHHcC-CcEEEEeccc
Q 021739 124 YEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL--TAED----ASLAIQYG-AAGIIVSNHG 196 (308)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~~~Pv~vK~~~--~~e~----a~~~~~~G-~d~i~v~~~g 196 (308)
.++ + .+++..++.++++|+.+++||++|+.. +.++ ++.+.++| +|+|+++|+.
T Consensus 139 -----------------~~~-g--~~~~~~~~ii~~vr~~~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~ 198 (314)
T 2e6f_A 139 -----------------PQV-A--YDFEAMRTYLQQVSLAYGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSV 198 (314)
T ss_dssp -----------------CCG-G--GSHHHHHHHHHHHHHHHCSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCCE
T ss_pred -----------------hhh-c--CCHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCCC
Confidence 001 1 244455789999999889999999874 4444 78889999 9999998865
Q ss_pred cc--CCC-----------------CC----cchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHH
Q 021739 197 AR--QLD-----------------YV----PATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVP 253 (308)
Q Consensus 197 g~--~~~-----------------~~----~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l 253 (308)
++ ..+ .+ +..+..+.++++.+ .++|||++|||+|++|+.+++++|||+|++||+++
T Consensus 199 ~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~-~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig~~~l 277 (314)
T 2e6f_A 199 GNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRC-PDKLVFGCGGVYSGEDAFLHILAGASMVQVGTALQ 277 (314)
T ss_dssp EEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHHTCSSEEECHHHH
T ss_pred CccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhc-CCCCEEEECCCCCHHHHHHHHHcCCCEEEEchhhH
Confidence 21 000 11 12356778887776 57999999999999999999999999999999999
Q ss_pred HhcccCCHHHHHHHHHHHHHHHHHHHHHcCCCCHhhhcccc
Q 021739 254 FSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNH 294 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~~ 294 (308)
+. |+ .+++.++++++.+|...|+++++|+++..
T Consensus 278 ~~----~p----~~~~~i~~~l~~~~~~~g~~~i~~~~g~~ 310 (314)
T 2e6f_A 278 EE----GP----GIFTRLEDELLEIMARKGYRTLEEFRGRV 310 (314)
T ss_dssp HH----CT----THHHHHHHHHHHHHHHHTCCSSTTTTTCC
T ss_pred hc----Cc----HHHHHHHHHHHHHHHHcCCCCHHHHhchH
Confidence 72 34 47889999999999999999999998764
No 17
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.94 E-value=8.4e-26 Score=215.42 Aligned_cols=149 Identities=22% Similarity=0.304 Sum_probs=119.5
Q ss_pred ccccCHHHHHHHHHhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEecccccC------CCCCcchHHHHHHHHHHcc-CC
Q 021739 149 DRSLNWKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ------LDYVPATVMALEEVVQAAK-GR 220 (308)
Q Consensus 149 d~~~~~~~i~~ir~~~-~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~------~~~~~~~~~~l~~i~~~~~-~~ 220 (308)
+++..++.++++|+.+ ++||+++.+.+.++++.+.++|+|+|.++.++|+. ...+.+.+..+.++.+.+. .+
T Consensus 177 ~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ 256 (404)
T 1eep_A 177 HSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTN 256 (404)
T ss_dssp SSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSS
T ss_pred ChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcC
Confidence 5566789999999998 89999998899999999999999999995444421 1124456777877776543 37
Q ss_pred CeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHh--------------------cc-----------------------
Q 021739 221 VPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS--------------------LA----------------------- 257 (308)
Q Consensus 221 ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~--------------------~~----------------------- 257 (308)
+|||++|||+++.|+.+++++|||+|++||+|+.. +.
T Consensus 257 ipVia~GGI~~~~d~~~ala~GAd~V~iG~~~l~~~e~~~~~~~~~g~~~k~~~g~~~~g~~~~g~~~~~~~g~~~~~~~ 336 (404)
T 1eep_A 257 ICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKESPSEEIIYNGKKFKSYVGMGSISAMKRGSKSRYFQLENNEPKK 336 (404)
T ss_dssp CEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHTBTTSSSCEEEETTEEEEC----------------------------
T ss_pred ceEEEECCCCCHHHHHHHHHcCCCHHhhCHHHhcCCCCCcchhhhCCeEEeecCCCCCHHHHhhccccchhccccccccc
Confidence 99999999999999999999999999999999643 11
Q ss_pred --cCCHHH-------HHHHHHHHHHHHHHHHHHcCCCCHhhhcccceec
Q 021739 258 --VDGEAG-------VRKVLQMLRDEFELTMALSGCRSLKEITRNHIVT 297 (308)
Q Consensus 258 --~~G~~~-------v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~~~~~ 297 (308)
.+|.++ |.++++.+.++|+..|.++|+++++||++..+.+
T Consensus 337 l~~~g~~~~v~~~~~v~~~~~~l~~el~~~m~~~G~~~i~~l~~~~~~~ 385 (404)
T 1eep_A 337 LVPEGIEGMVPYSGKLKDILTQLKGGLMSGMGYLGAATISDLKINSKFV 385 (404)
T ss_dssp --------CEECCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHSCCEE
T ss_pred ccCceeEEeccCCccHHHHHHHHHHHHHHHHHHhCCCCHHHHhhcCcEE
Confidence 122233 8899999999999999999999999999886553
No 18
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=99.94 E-value=7.8e-27 Score=215.85 Aligned_cols=245 Identities=19% Similarity=0.168 Sum_probs=183.7
Q ss_pred ccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCCC---------HHHHhccCCCCceEEeeecCCchHHH
Q 021739 9 NISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSS---------VEEVSSTGPGIRFFQLYVTKHRNVDA 79 (308)
Q Consensus 9 ~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~---------~e~i~~~~~~~~~~Ql~~~~d~~~~~ 79 (308)
++++||++|||++. + +.++++.+++.|+++++|++.+.. ++.+....+.+.++||+ +.+++.+.
T Consensus 2 ~l~nri~~APM~~~--t----~~~~r~~~~~~G~gli~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~QL~-g~~~~~~~ 74 (318)
T 1vhn_A 2 SLEVKVGLAPMAGY--T----DSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKTEELLPQPHERNVAVQIF-GSEPNELS 74 (318)
T ss_dssp ---CEEEECCCTTT--C----SHHHHHHHHTTTCCCEECSCEEHHHHHTTCHHHHHHSCCTTCTTEEEEEE-CSCHHHHH
T ss_pred ccCCCEEECCCCCC--C----cHHHHHHHHHHCcCEEEeCCEEEcccccCCHhHHHhhhCcCCCeEEEEeC-CCCHHHHH
Confidence 57899999999965 5 468999999999999999884321 12231112248999999 88999999
Q ss_pred HHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHH
Q 021739 80 QLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKW 159 (308)
Q Consensus 80 ~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ 159 (308)
+.+++++++ +++|+||++||....|.. +| +..++ .++++.++.+++
T Consensus 75 ~aa~~a~~~-~d~Iein~gcP~~~~r~~----~~---------------------------G~~l~--~~~~~~~eiv~~ 120 (318)
T 1vhn_A 75 EAARILSEK-YKWIDLNAGCPVRKVVKE----GA---------------------------GGALL--KDLRHFRYIVRE 120 (318)
T ss_dssp HHHHHHTTT-CSEEEEEECCCCHHHHHT----TC---------------------------GGGGG--SCHHHHHHHHHH
T ss_pred HHHHHHHHh-CCEEEEECCCCcHhcCCC----Cc---------------------------ccchh--hCHHHHHHHHHH
Confidence 999999999 999999999997522210 01 11222 367888999999
Q ss_pred HHHhcCCCEEEEecC------CHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHH
Q 021739 160 LQTITSLPILVKGVL------TAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGT 233 (308)
Q Consensus 160 ir~~~~~Pv~vK~~~------~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~ 233 (308)
+++.+++||++|++. +.+.++.+.++|+|+|++++....+...+++.++.+.++++ ++|||++|||+|++
T Consensus 121 v~~~~~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~----~ipVi~~GgI~s~~ 196 (318)
T 1vhn_A 121 LRKSVSGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK----RIPTFVSGDIFTPE 196 (318)
T ss_dssp HHHHCSSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCC----SSCEEEESSCCSHH
T ss_pred HHHhhCCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHc----CCeEEEECCcCCHH
Confidence 999999999999753 13789999999999999976433232234455655555432 79999999999999
Q ss_pred HHHHHHH-cCCCEEEEchHHHHhc-----ccC----CH---HHHHHHHHHHHHHHHHHHHHcCCC-CHhhhcccceecc
Q 021739 234 DVFKALA-LGASGVFVGRPVPFSL-----AVD----GE---AGVRKVLQMLRDEFELTMALSGCR-SLKEITRNHIVTH 298 (308)
Q Consensus 234 d~~k~l~-~GAd~V~ig~~~l~~~-----~~~----G~---~~v~~~i~~l~~~l~~~m~~~G~~-~i~~l~~~~~~~~ 298 (308)
|+.++++ .|||+||+||+++... ... |. .++.+.++.+.++++..|.+.|.. .+.+++++..+..
T Consensus 197 da~~~l~~~gad~V~iGR~~l~~P~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 275 (318)
T 1vhn_A 197 DAKRALEESGCDGLLVARGAIGRPWIFKQIKDFLRSGKYSEPSREEILRTFERHLELLIKTKGERKAVVEMRKFLAGYT 275 (318)
T ss_dssp HHHHHHHHHCCSEEEESGGGTTCTTHHHHHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHT
T ss_pred HHHHHHHcCCCCEEEECHHHHhCcchHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Confidence 9999999 7999999999876421 111 32 356788999999999999999976 8889988866543
No 19
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.92 E-value=4.8e-24 Score=198.37 Aligned_cols=240 Identities=15% Similarity=0.175 Sum_probs=178.6
Q ss_pred CceeecCcccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCC-C--------------------------C
Q 021739 1 MTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWAT-S--------------------------S 53 (308)
Q Consensus 1 ~~t~~~g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~-~--------------------------~ 53 (308)
|+|+++|.++++||++|+=... . +....+.+.+.|.++++....+ . .
T Consensus 38 L~~~~~Gl~~~NPv~lAaG~~~--~----~~e~~~~~~~~G~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~n~G 111 (345)
T 3oix_A 38 THTTIGSFDFDNCLMNAAGVYC--M----TREELAAIDHSEAGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLPNLG 111 (345)
T ss_dssp CCEEETTEEESCSEEECTTSSC--S----SHHHHHHHHTSSCSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCCBSC
T ss_pred cCeEECCEECCCCCEEcCCCCC--C----CHHHHHHHHHcCCCeEEeeeecCCCCCCCCCCcEEecccchhccCCCCChh
Confidence 6899999999999999973221 1 3467788889998877653211 0 1
Q ss_pred ----HHHHhcc----CCCCceEEeeecCCchHHHHHHHHHHHcCCc-EEEEecCCCCCCcchHHhhhccCCCCccccccc
Q 021739 54 ----VEEVSST----GPGIRFFQLYVTKHRNVDAQLVKRAERAGFK-AIALTVDTPRLGRREADIKNRFVLPPHLTLKNY 124 (308)
Q Consensus 54 ----~e~i~~~----~~~~~~~Ql~~~~d~~~~~~~~~~~~~~g~~-~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~ 124 (308)
++++.+. ...|.++|+. +.+++.+.+.++++++.|++ +|+||+.||..-
T Consensus 112 ~~~~~~~l~~~~~~~~~~pvivsI~-g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~--------------------- 169 (345)
T 3oix_A 112 INYYLDYVTELQKQPDSKNHFLSLV-GMSPEETHTILXMVEASKYQGLVELNLSCPNVP--------------------- 169 (345)
T ss_dssp HHHHHHHHHHHHHSTTCCCCEEEEC-CSSHHHHHHHHHHHHHSSCCSEEEEECSCCCST---------------------
T ss_pred HHHHHHHHHHHhhccCCCCEEEEec-CCCHHHHHHHHHHHhccCCCcEEEEecCCCCcC---------------------
Confidence 2233321 2248899998 88999999999999988987 999999999640
Q ss_pred cccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhcCCCEEEEecCC---HHHHHHHHHcCCcEEEEeccc-----
Q 021739 125 EGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLT---AEDASLAIQYGAAGIIVSNHG----- 196 (308)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~~~Pv~vK~~~~---~e~a~~~~~~G~d~i~v~~~g----- 196 (308)
+. ..++ .|++...+.++++++.+++||++|+..+ .+.++.+.++|+|+|.+.|..
T Consensus 170 --------------G~-~~l~--~~~e~l~~il~av~~~~~~PV~vKi~p~~~~~~~a~~~~~aga~~i~~int~nt~g~ 232 (345)
T 3oix_A 170 --------------GX-PQIA--YDFETTDQILSEVFTYFTKPLGIKLPPYFDIVHFDQAAAIFNXYPLTFVNCINSIGN 232 (345)
T ss_dssp --------------TC-CCGG--GCHHHHHHHHHHHTTTCCSCEEEEECCCCCHHHHHHHHHHHTTSCCSEEEECCCEEE
T ss_pred --------------Cc-hhhc--CCHHHHHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHhCCCceEEEEeeccccc
Confidence 00 0111 2555567889999999999999999853 355778888888777543321
Q ss_pred ------cc-CC--------CCCcc----hHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHhcc
Q 021739 197 ------AR-QL--------DYVPA----TVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLA 257 (308)
Q Consensus 197 ------g~-~~--------~~~~~----~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~~~ 257 (308)
.+ .. .++++ .++.+.++++.+.+++|||++|||+|++|+.+++.+|||+|++||+|++.
T Consensus 233 ~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~igra~~~~-- 310 (345)
T 3oix_A 233 GLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIGTALHQE-- 310 (345)
T ss_dssp EECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHH--
T ss_pred ceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEChHHHhc--
Confidence 11 01 11222 35677888777755799999999999999999999999999999997764
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHcCCCCHhhhccc
Q 021739 258 VDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRN 293 (308)
Q Consensus 258 ~~G~~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~ 293 (308)
|+ .+++.++++|+.+|...|+++++|+++.
T Consensus 311 --gP----~~~~~i~~~L~~~l~~~G~~si~e~~G~ 340 (345)
T 3oix_A 311 --GP----QIFKRITKELXAIMTEKGYETLEDFRGK 340 (345)
T ss_dssp --CT----HHHHHHHHHHHHHHHHHTCCSGGGTTTC
T ss_pred --Ch----HHHHHHHHHHHHHHHHcCCCCHHHHHhH
Confidence 55 4778899999999999999999999876
No 20
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.92 E-value=2.4e-24 Score=200.95 Aligned_cols=240 Identities=18% Similarity=0.146 Sum_probs=178.7
Q ss_pred CceeecCcccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeec-CCC------C--------------------CC
Q 021739 1 MTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLS-SWA------T--------------------SS 53 (308)
Q Consensus 1 ~~t~~~g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s-~~~------~--------------------~~ 53 (308)
|+|+++|.++++||++|+=... . +....+.+.+.|.++++. +.. . ..
T Consensus 37 L~~~~~Gl~~~NPv~lAAG~~~--~----~~e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~~~~iN~~G~~n~G 110 (354)
T 4ef8_A 37 LQVNLLNNTFANPFMNAAGVMC--T----TTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNG 110 (354)
T ss_dssp CCEEETTEEESSSEEECTTSSC--S----SHHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCC
T ss_pred cceEECCEECCCCCEeccCCCC--C----CHHHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecchhhhccCCCCCcC
Confidence 6899999999999999984332 1 446777888888876653 211 0 01
Q ss_pred H----HHHhccC--C-CCceEEeeecCCchHHHHHHHHHH---HcCCcEEEEecCCCCCCcchHHhhhccCCCCcccccc
Q 021739 54 V----EEVSSTG--P-GIRFFQLYVTKHRNVDAQLVKRAE---RAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKN 123 (308)
Q Consensus 54 ~----e~i~~~~--~-~~~~~Ql~~~~d~~~~~~~~~~~~---~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~ 123 (308)
+ +++.+.. + .|.++|++ +.+++.+.+.+++++ +.|+++|+||+.||.. | +
T Consensus 111 ~~~~~~~l~~~~~~~~~pvivsI~-G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~-------------~-g----- 170 (354)
T 4ef8_A 111 FDFYLAYAAEQHDYGKKPLFLSMS-GLSMRENVEMCKRLAAVATEKGVILELNLSCPNV-------------P-G----- 170 (354)
T ss_dssp HHHHHHHHHHTCCTTTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCS-------------T-T-----
T ss_pred HHHHHHHHHHHhhcCCCcEEEEec-cCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCC-------------C-C-----
Confidence 2 2333221 2 37899998 889999999999887 5789999999999964 0 0
Q ss_pred ccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhcCCCEEEEecCC--HHH----HHHHHHcC-CcEEEEeccc
Q 021739 124 YEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLT--AED----ASLAIQYG-AAGIIVSNHG 196 (308)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~~~Pv~vK~~~~--~e~----a~~~~~~G-~d~i~v~~~g 196 (308)
+ ..++ .|++...+.++++++.+++||++|+... .++ ++.+.++| +|+|+++|+.
T Consensus 171 -------------g----~~l~--~~~e~~~~il~av~~~~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~ 231 (354)
T 4ef8_A 171 -------------K----PQVA--YDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSI 231 (354)
T ss_dssp -------------S----CCGG--GSHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCE
T ss_pred -------------c----hhhc--cCHHHHHHHHHHHHHhhCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEeccc
Confidence 0 0111 2556667899999999999999999853 322 44555887 9999987753
Q ss_pred c----------c------CCC---CC----cchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHH
Q 021739 197 A----------R------QLD---YV----PATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVP 253 (308)
Q Consensus 197 g----------~------~~~---~~----~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l 253 (308)
+ + ... ++ +..++.+.++++. ..++|||++|||+|++|+.+++.+|||+||+||+++
T Consensus 232 ~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~-~~~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l 310 (354)
T 4ef8_A 232 GNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRR-CPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQ 310 (354)
T ss_dssp EEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHH-CTTSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHH
T ss_pred CcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHh-CCCCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHH
Confidence 1 1 001 12 2356778888776 347999999999999999999999999999999999
Q ss_pred HhcccCCHHHHHHHHHHHHHHHHHHHHHcCCCCHhhhcccc
Q 021739 254 FSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNH 294 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~~ 294 (308)
+. |+ .+++.++++|+.+|...|+++++|+++..
T Consensus 311 ~~----GP----~~~~~i~~~l~~~m~~~G~~si~el~G~~ 343 (354)
T 4ef8_A 311 EE----GP----SIFERLTSELLGVMAKKRYQTLDEFRGKV 343 (354)
T ss_dssp HH----CT----THHHHHHHHHHHHHHHHTCCSGGGTTTCC
T ss_pred Hh----CH----HHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 74 55 36788999999999999999999999873
No 21
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=99.92 E-value=1.7e-23 Score=195.73 Aligned_cols=250 Identities=17% Similarity=0.172 Sum_probs=183.4
Q ss_pred cCCceEeccccCcccCCCHHHHHHHHHHHHcCC-ceeecCCCCCC------HHHHhccCC--CCceEEeeecCCchHHHH
Q 021739 10 ISMPIMIAPTAFQKMAHPEGECATARAASAAGT-IMTLSSWATSS------VEEVSSTGP--GIRFFQLYVTKHRNVDAQ 80 (308)
Q Consensus 10 ~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~-~~~~s~~~~~~------~e~i~~~~~--~~~~~Ql~~~~d~~~~~~ 80 (308)
+++||++|||++. + +..++..++++|. ++++|++.+.. .+++....+ .+.++||+ +.+++.+.+
T Consensus 2 l~nriv~APM~g~--t----d~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~-g~~p~~~~~ 74 (350)
T 3b0p_A 2 LDPRLSVAPMVDR--T----DRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRERLLAFRPEEHPIALQLA-GSDPKSLAE 74 (350)
T ss_dssp CCCSEEECCCTTT--S----SHHHHHHHHHHCSSSBEECCCEEHHHHHHSCHHHHHCCCGGGCSEEEEEE-CSCHHHHHH
T ss_pred CCCCEEECCCCCC--C----HHHHHHHHHHcCCCCEEEeCCEEechhhcCCHHHHhccCCCCCeEEEEeC-CCCHHHHHH
Confidence 6789999999974 6 6688889999996 88888884321 123443332 48899999 889999999
Q ss_pred HHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHH
Q 021739 81 LVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWL 160 (308)
Q Consensus 81 ~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~i 160 (308)
.+++++++|++.|+||++||....+. + +.+..++ .++++..+.++++
T Consensus 75 aA~~a~~~G~D~IeIn~gcP~~~~~~----d---------------------------~~G~~l~--~~~~~~~eiv~av 121 (350)
T 3b0p_A 75 AARIGEAFGYDEINLNLGCPSEKAQE----G---------------------------GYGACLL--LDLARVREILKAM 121 (350)
T ss_dssp HHHHHHHTTCSEEEEEECCCSHHHHH----T---------------------------TCGGGGG--GCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCcCCCCcCcC----C---------------------------CcchhHH--hCHHHHHHHHHHH
Confidence 99999999999999999999752111 0 0111222 3677788999999
Q ss_pred HHhcCCCEEEEecCC----------HHHHHHHHHcCCcEEEEecccccCCC-------CCcchHHHHHHHHHHccCCCeE
Q 021739 161 QTITSLPILVKGVLT----------AEDASLAIQYGAAGIIVSNHGARQLD-------YVPATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 161 r~~~~~Pv~vK~~~~----------~e~a~~~~~~G~d~i~v~~~gg~~~~-------~~~~~~~~l~~i~~~~~~~ipv 223 (308)
++.+++||++|++.. .+.++.+.++|+|+|++++....+.. ..+..++.+.++++.+ .++||
T Consensus 122 ~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~-~~iPV 200 (350)
T 3b0p_A 122 GEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDF-PQLTF 200 (350)
T ss_dssp HHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHC-TTSEE
T ss_pred HHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhC-CCCeE
Confidence 998999999998631 35578999999999999764311101 1123678888888765 37999
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEEchHHHHhcc--------cCC---HHHHHHHHHHHHHHHHHHHHHcCCCCHhhhcc
Q 021739 224 FLDGGVRRGTDVFKALALGASGVFVGRPVPFSLA--------VDG---EAGVRKVLQMLRDEFELTMALSGCRSLKEITR 292 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~~~--------~~G---~~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~ 292 (308)
|++|||+|++|+.++++ |||+||+||+++.... ..| .....+.++.+.++++..+. .|. .+.++++
T Consensus 201 ianGgI~s~eda~~~l~-GaD~V~iGRa~l~~P~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~g~-~~~~~~k 277 (350)
T 3b0p_A 201 VTNGGIRSLEEALFHLK-RVDGVMLGRAVYEDPFVLEEADRRVFGLPRRPSRLEVARRMRAYLEEEVL-KGT-PPWAVLR 277 (350)
T ss_dssp EEESSCCSHHHHHHHHT-TSSEEEECHHHHHCGGGGTTHHHHTTCCSCCCCHHHHHHHHHHHHHHHHH-HTC-CHHHHHT
T ss_pred EEECCcCCHHHHHHHHh-CCCEEEECHHHHhCcHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHH-cCc-cHHHHHH
Confidence 99999999999999998 9999999998865310 112 12345677788888887777 465 6899999
Q ss_pred cceeccCCCCc
Q 021739 293 NHIVTHWDTPG 303 (308)
Q Consensus 293 ~~~~~~~~~~~ 303 (308)
+..+.....|+
T Consensus 278 h~~~~~~g~~~ 288 (350)
T 3b0p_A 278 HMLNLFRGRPK 288 (350)
T ss_dssp TSTTTTTTSTT
T ss_pred HHHHHHccCCC
Confidence 87665444343
No 22
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.91 E-value=2.1e-23 Score=219.58 Aligned_cols=243 Identities=21% Similarity=0.255 Sum_probs=184.8
Q ss_pred CceeecCcccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecC-CC-------CC--------------------
Q 021739 1 MTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSS-WA-------TS-------------------- 52 (308)
Q Consensus 1 ~~t~~~g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~-~~-------~~-------------------- 52 (308)
++++++|.++++||++|||++. . +.++++.+.+.|.+++++. .. ..
T Consensus 533 ls~~~~G~~~~nPv~lAa~~~~--~----~~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~~~~~~~~ 606 (1025)
T 1gte_A 533 ISVEMAGLKFINPFGLASAAPT--T----SSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSS 606 (1025)
T ss_dssp CCEEETTEEESSSEEECSSGGG--S----SHHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEECCTTCSCCSSCCSC
T ss_pred ceeeeccccccCcccccCCCCC--C----CHHHHHHHHHCCcCeEEeceecccccccCCCCccEEeccccccccCCchhh
Confidence 5789999999999999999875 3 4577888888899888721 11 00
Q ss_pred ----------C-------HHHHhccCC-CCceEEeeecCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccC
Q 021739 53 ----------S-------VEEVSSTGP-GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFV 114 (308)
Q Consensus 53 ----------~-------~e~i~~~~~-~~~~~Ql~~~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~ 114 (308)
. ++++....+ .+.++|++.+.+.+.+.++++++++.|+++|+||++||.. .+.+
T Consensus 607 ~~n~e~~~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~-~~~~------- 678 (1025)
T 1gte_A 607 FLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHG-MGER------- 678 (1025)
T ss_dssp EEECCCSCSSCHHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCC-CC---------
T ss_pred eeeeccccchhHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCC-CCCC-------
Confidence 1 122233333 4788898767899999999999999999999999999964 1110
Q ss_pred CCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhcCCCEEEEecCC----HHHHHHHHHcCCcEE
Q 021739 115 LPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLT----AEDASLAIQYGAAGI 190 (308)
Q Consensus 115 ~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~~~Pv~vK~~~~----~e~a~~~~~~G~d~i 190 (308)
+.+..++ .+++..++.++++++.+++||++|+..+ .+.++.+.++|+|+|
T Consensus 679 ------------------------~~G~~~~--~~~~~~~~iv~~v~~~~~~Pv~vK~~~~~~~~~~~a~~~~~~G~d~i 732 (1025)
T 1gte_A 679 ------------------------GMGLACG--QDPELVRNICRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGV 732 (1025)
T ss_dssp ---------------------------SBGG--GCHHHHHHHHHHHHHHCSSCEEEEECSCSSCHHHHHHHHHHHTCSEE
T ss_pred ------------------------Ccccccc--cCHHHHHHHHHHHHHhhCCceEEEeCCChHHHHHHHHHHHHcCCCEE
Confidence 0011122 2567778999999999999999999854 456899999999999
Q ss_pred EEeccc--------------------ccCC--CCCcch----HHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCC
Q 021739 191 IVSNHG--------------------ARQL--DYVPAT----VMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGAS 244 (308)
Q Consensus 191 ~v~~~g--------------------g~~~--~~~~~~----~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd 244 (308)
+++|+. ++.. ..+++. +..+.++++.+ .++|||++|||+|++|+.+++++|||
T Consensus 733 ~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~-~~ipvi~~GGI~s~~da~~~l~~Ga~ 811 (1025)
T 1gte_A 733 TATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARAL-PGFPILATGGIDSAESGLQFLHSGAS 811 (1025)
T ss_dssp EECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHS-TTCCEEEESSCCSHHHHHHHHHTTCS
T ss_pred EEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHc-CCCCEEEecCcCCHHHHHHHHHcCCC
Confidence 997631 1111 112223 35677777766 46999999999999999999999999
Q ss_pred EEEEchHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHcCCCCHhhhcc
Q 021739 245 GVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITR 292 (308)
Q Consensus 245 ~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~ 292 (308)
+|++||++++. +. .+++.+.++|+.+|...|+.++.++++
T Consensus 812 ~v~vg~~~l~~----~~----~~~~~~~~~l~~~l~~~G~~~i~~l~g 851 (1025)
T 1gte_A 812 VLQVCSAVQNQ----DF----TVIQDYCTGLKALLYLKSIEELQGWDG 851 (1025)
T ss_dssp EEEESHHHHTS----CT----THHHHHHHHHHHHHHHTTCGGGTTSBT
T ss_pred EEEEeeccccC----Cc----cHHHHHHHHHHHHHHHcCCCCHHHHhC
Confidence 99999999962 33 467889999999999999999999987
No 23
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.91 E-value=2.7e-23 Score=191.05 Aligned_cols=238 Identities=18% Similarity=0.168 Sum_probs=171.7
Q ss_pred CceeecCcccCCceEecc-ccCcccCCCHHHHHHHHHHHHcCCceeec-------------------------CC--CCC
Q 021739 1 MTTTVLGFNISMPIMIAP-TAFQKMAHPEGECATARAASAAGTIMTLS-------------------------SW--ATS 52 (308)
Q Consensus 1 ~~t~~~g~~~~~Pi~iap-m~~~~~~~~~~~~~~a~~a~~~g~~~~~s-------------------------~~--~~~ 52 (308)
|+++|+|.++++||++|| |.+. +. .+++.+.+.|.+++++ .. ...
T Consensus 7 l~~~~~g~~l~npi~~aag~~~~--~~-----~~~~~~~~~g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~g~~~~ 79 (311)
T 1ep3_A 7 LSVKLPGLDLKNPIIPASGCFGF--GE-----EYAKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAIGLQNP 79 (311)
T ss_dssp TCEEETTEEESSSEEECTTSSTT--ST-----TGGGTSCGGGSSCEEEEEECSSCBCCCCSCCEEEETTEEEECCCCCBC
T ss_pred cceEECCEECCCCcEECCCCCCC--CH-----HHHHHHHhcCCCEEEeCeeccCccCCCCCCeEEECCcccccccCCCCc
Confidence 589999999999999999 7654 21 2344443445444441 11 112
Q ss_pred CHHHH--------hccC-CCCceEEeeecCCchHHHHHHHHHHH-cCCcEEEEecCCCCCCcchHHhhhccCCCCccccc
Q 021739 53 SVEEV--------SSTG-PGIRFFQLYVTKHRNVDAQLVKRAER-AGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLK 122 (308)
Q Consensus 53 ~~e~i--------~~~~-~~~~~~Ql~~~~d~~~~~~~~~~~~~-~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~ 122 (308)
..++. .+.. ..+.++|++ ..+.+...+.++++++ .|+++|++|++||....+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~p~~v~l~-~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g----------------- 141 (311)
T 1ep3_A 80 GLEVIMTEKLPWLNENFPELPIIANVA-GSEEADYVAVCAKIGDAANVKAIELNISCPNVKHG----------------- 141 (311)
T ss_dssp CHHHHHHTHHHHHHHHCTTSCEEEEEC-CSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGT-----------------
T ss_pred CHHHHHHHHHHHHHhcCCCCcEEEEEc-CCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCc-----------------
Confidence 22222 1213 347899998 7778888889998888 899999999999853100
Q ss_pred cccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhcCCCEEEEecC---C-HHHHHHHHHcCCcEEEEecc---
Q 021739 123 NYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL---T-AEDASLAIQYGAAGIIVSNH--- 195 (308)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~~~Pv~vK~~~---~-~e~a~~~~~~G~d~i~v~~~--- 195 (308)
...+. .++++..+.++++++.+++||++|+.. + .+.++.+.++|+|+|++++.
T Consensus 142 -----------------~~~~g---~~~~~~~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~g 201 (311)
T 1ep3_A 142 -----------------GQAFG---TDPEVAAALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTMINTLMG 201 (311)
T ss_dssp -----------------TEEGG---GCHHHHHHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCSEEEECCCEEE
T ss_pred -----------------hhhhc---CCHHHHHHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcCCCEEEEeCCCcc
Confidence 00011 245556789999999889999999873 2 45689999999999999762
Q ss_pred ----cccCC---------CCCcc----hHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHhccc
Q 021739 196 ----GARQL---------DYVPA----TVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAV 258 (308)
Q Consensus 196 ----gg~~~---------~~~~~----~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~~~~ 258 (308)
..+.. ..++. .+..+.++++.+ ++|||++|||++++|+.+++++|||+|++||+++..
T Consensus 202 ~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~--~ipvia~GGI~~~~d~~~~l~~GAd~V~vg~~~l~~--- 276 (311)
T 1ep3_A 202 VRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDV--DIPIIGMGGVANAQDVLEMYMAGASAVAVGTANFAD--- 276 (311)
T ss_dssp CCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTC--SSCEEECSSCCSHHHHHHHHHHTCSEEEECTHHHHC---
T ss_pred cccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhc--CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHcC---
Confidence 11100 01222 235566666554 799999999999999999999999999999999973
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHcCCCCHhhhcccc
Q 021739 259 DGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNH 294 (308)
Q Consensus 259 ~G~~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~~ 294 (308)
+ +.++.++++++.+|...|+++++|+++..
T Consensus 277 --p----~~~~~i~~~l~~~~~~~g~~~~~~~~g~~ 306 (311)
T 1ep3_A 277 --P----FVCPKIIDKLPELMDQYRIESLESLIQEV 306 (311)
T ss_dssp --T----THHHHHHHHHHHHHHHTTCSCHHHHHHHH
T ss_pred --c----HHHHHHHHHHHHHHHHcCCCCHHHHhChh
Confidence 3 36778899999999999999999998753
No 24
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.90 E-value=1.4e-22 Score=191.50 Aligned_cols=238 Identities=17% Similarity=0.158 Sum_probs=163.9
Q ss_pred CceeecCcccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeec-CCCCC---------------------------
Q 021739 1 MTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLS-SWATS--------------------------- 52 (308)
Q Consensus 1 ~~t~~~g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s-~~~~~--------------------------- 52 (308)
++|+++|.++++||++|+=. +.++ .......++|.+++.. +....
T Consensus 84 l~v~~~Gl~f~NPvglAAG~-----dk~~--~~~~~l~~lGfG~vevgtvT~~pq~GNp~PRlfrl~e~~aiiN~~GfnN 156 (415)
T 3i65_A 84 ACTNIKHLDFINPFGVAAGF-----DKNG--VCIDSILKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNN 156 (415)
T ss_dssp GCEEETTEEESSSEEECTTS-----STTC--SSHHHHHTTTCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECCCSCB
T ss_pred ccEEECCEECCCCCEECCCC-----CCCH--HHHHHHHHcCCCeEEeCcccCCcCCCCCCCeEEeccCCCceeecCCCCc
Confidence 36899999999999999932 2212 2335666888765532 22110
Q ss_pred -CH----HHHhcc---C-------CCCceEEeeecCC-----chHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhc
Q 021739 53 -SV----EEVSST---G-------PGIRFFQLYVTKH-----RNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNR 112 (308)
Q Consensus 53 -~~----e~i~~~---~-------~~~~~~Ql~~~~d-----~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~ 112 (308)
.. +++.+. . ..+..+|+. ..+ .+...+.++++.+. +++|+||+.||...
T Consensus 157 ~G~d~~~~~l~~~~~~~~~~~~~~~~~vgvnIg-~nk~t~~~~~Dy~~~a~~l~~~-ad~ieiNiScPNt~--------- 225 (415)
T 3i65_A 157 MGCDKVTENLILFRKRQEEDKLLSKHIVGVSIG-KNKDTVNIVDDLKYCINKIGRY-ADYIAINVSSPNTP--------- 225 (415)
T ss_dssp CCHHHHHHHHHHHHHHHTTCGGGTTCEEEEEEC-CCTTCSCHHHHHHHHHHHHGGG-CSEEEEECCCCC-----------
T ss_pred hhHHHHHHHHHHHHhhccccccccCceEEEEec-cccCccccHHHHHHHHHHHHhh-CCEEEEECCCCCCC---------
Confidence 01 122110 0 124567875 333 34555555666554 78899999998640
Q ss_pred cCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHh--------------------cCCC-EEEE
Q 021739 113 FVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTI--------------------TSLP-ILVK 171 (308)
Q Consensus 113 ~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~--------------------~~~P-v~vK 171 (308)
+. ..+ .+++...+.++++++. .++| |++|
T Consensus 226 -----Gl----------------------~~l---q~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VK 275 (415)
T 3i65_A 226 -----GL----------------------RDN---QEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVK 275 (415)
T ss_dssp ------------------------------------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEE
T ss_pred -----Cc----------------------ccc---cCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEE
Confidence 00 011 2444445667777664 2689 9999
Q ss_pred ecCC------HHHHHHHHHcCCcEEEEecccccCCC--------C---Cc----chHHHHHHHHHHccCCCeEEEecCCC
Q 021739 172 GVLT------AEDASLAIQYGAAGIIVSNHGARQLD--------Y---VP----ATVMALEEVVQAAKGRVPVFLDGGVR 230 (308)
Q Consensus 172 ~~~~------~e~a~~~~~~G~d~i~v~~~gg~~~~--------~---~~----~~~~~l~~i~~~~~~~ipvia~GGI~ 230 (308)
+..+ .+.++.+.++|+|+|+++|++..+.+ + ++ .+++.+.++++.+.+++|||++|||+
T Consensus 276 i~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~ 355 (415)
T 3i65_A 276 LAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIF 355 (415)
T ss_dssp ECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCC
T ss_pred ecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCC
Confidence 9843 24588999999999999998653221 1 22 23467888888876689999999999
Q ss_pred CHHHHHHHHHcCCCEEEEchHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHcCCCCHhhhcccc
Q 021739 231 RGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNH 294 (308)
Q Consensus 231 ~~~d~~k~l~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~~ 294 (308)
|++|+.+++.+|||+|++||++++. |+ .++..++++|+.+|...|+++++|+++..
T Consensus 356 s~eDa~e~l~aGAd~VqIgra~l~~----GP----~~~~~i~~~L~~~l~~~G~~si~e~~G~~ 411 (415)
T 3i65_A 356 SGLDALEKIEAGASVCQLYSCLVFN----GM----KSAVQIKRELNHLLYQRGYYNLKEAIGRK 411 (415)
T ss_dssp SHHHHHHHHHHTEEEEEESHHHHHH----GG----GHHHHHHHHHHHHHHHTTCSSSTTTTTTT
T ss_pred CHHHHHHHHHcCCCEEEEcHHHHhc----CH----HHHHHHHHHHHHHHHHcCCCCHHHHhChh
Confidence 9999999999999999999999974 55 36788999999999999999999998764
No 25
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.90 E-value=3.4e-22 Score=187.54 Aligned_cols=238 Identities=20% Similarity=0.208 Sum_probs=164.6
Q ss_pred CceeecCcccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeec-CCCCC---------------------------
Q 021739 1 MTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLS-SWATS--------------------------- 52 (308)
Q Consensus 1 ~~t~~~g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s-~~~~~--------------------------- 52 (308)
|+++++|.++++||++|+=. +.++ .......++|.++++. +....
T Consensus 50 L~~~~~Gl~~~NPvglAaG~-----~~~~--~~~~~~~~~g~G~v~~ktvt~~pq~GNp~PR~~~~~~~~~~iN~~G~~N 122 (367)
T 3zwt_A 50 LEVRVLGHKFRNPVGIAAGF-----DKHG--EAVDGLYKMGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNS 122 (367)
T ss_dssp GCEEETTEEESSSEEECTTS-----STTS--SSHHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECCCCCB
T ss_pred CcEEECCEEcCCCCEeCCCc-----CCCH--HHHHHHHhcCcCeEEeCCccCCCCCCCCCCeEEEecCccceeeccCCCC
Confidence 47899999999999999731 2222 2234444568776653 21100
Q ss_pred -C----HHHHhcc---------CCCCceEEeeecC-----CchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhcc
Q 021739 53 -S----VEEVSST---------GPGIRFFQLYVTK-----HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRF 113 (308)
Q Consensus 53 -~----~e~i~~~---------~~~~~~~Ql~~~~-----d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~ 113 (308)
. ++++.+. ...+.++|+. .. +++...+.++++.+ .+++|+||+.||..-
T Consensus 123 ~G~~~~~~~l~~~~~~~~~~~~~~~pv~vnig-gn~~t~~~~~dy~~~~~~~~~-~ad~ielNisCPn~~---------- 190 (367)
T 3zwt_A 123 HGLSVVEHRLRARQQKQAKLTEDGLPLGVNLG-KNKTSVDAAEDYAEGVRVLGP-LADYLVVNVSSPNTA---------- 190 (367)
T ss_dssp CCHHHHHHHHHTTHHHHHHHHHTTCCEEEEEC-CCTTCSCHHHHHHHHHHHHGG-GCSEEEEECCCTTST----------
T ss_pred ccHHHHHHHHHHHhhhccccccCCceEEEEEe-cCCCCCcCHHHHHHHHHHHhh-hCCEEEEECCCCCCC----------
Confidence 1 1223221 1237889996 42 34445555555543 489999999999640
Q ss_pred CCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHh-------cCCCEEEEecCC--H----HHHH
Q 021739 114 VLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTI-------TSLPILVKGVLT--A----EDAS 180 (308)
Q Consensus 114 ~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~-------~~~Pv~vK~~~~--~----e~a~ 180 (308)
+.. .+ .+++...+.++++++. +++||++|+..+ . +.++
T Consensus 191 -------------------------G~~-~l---~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~ 241 (367)
T 3zwt_A 191 -------------------------GLR-SL---QGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIAS 241 (367)
T ss_dssp -------------------------TGG-GG---GSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHH
T ss_pred -------------------------Ccc-cc---CCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHH
Confidence 000 11 1333344566666543 689999999843 2 3578
Q ss_pred HHHHcCCcEEEEeccc-ccC---------CCC---Ccc----hHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCC
Q 021739 181 LAIQYGAAGIIVSNHG-ARQ---------LDY---VPA----TVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGA 243 (308)
Q Consensus 181 ~~~~~G~d~i~v~~~g-g~~---------~~~---~~~----~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GA 243 (308)
.+.++|+|+|+++|+. ++. ..+ +++ +++.+.++++.+.+++|||++|||+|++|+.+++++||
T Consensus 242 ~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GA 321 (367)
T 3zwt_A 242 VVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGA 321 (367)
T ss_dssp HHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTC
T ss_pred HHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCC
Confidence 8999999999999875 221 011 222 35778888888766899999999999999999999999
Q ss_pred CEEEEchHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHcCCCCHhhhcccc
Q 021739 244 SGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNH 294 (308)
Q Consensus 244 d~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~~ 294 (308)
|+|++||++++. |+ .++..+.++|+.+|...|+++++|+++..
T Consensus 322 d~V~vgra~l~~----gP----~~~~~i~~~l~~~m~~~G~~~i~e~~G~~ 364 (367)
T 3zwt_A 322 SLVQLYTALTFW----GP----PVVGKVKRELEALLKEQGFGGVTDAIGAD 364 (367)
T ss_dssp SEEEESHHHHHH----CT----HHHHHHHHHHHHHHHHTTCSSHHHHTTGG
T ss_pred CEEEECHHHHhc----Cc----HHHHHHHHHHHHHHHHcCCCCHHHhhCcc
Confidence 999999999874 55 46788999999999999999999998864
No 26
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.89 E-value=5e-22 Score=184.87 Aligned_cols=206 Identities=17% Similarity=0.169 Sum_probs=139.0
Q ss_pred CceeecCcccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCCC---------------------------
Q 021739 1 MTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSS--------------------------- 53 (308)
Q Consensus 1 ~~t~~~g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~--------------------------- 53 (308)
|+++++|.++++||++|++ . ++++ .+++.+.+.|+++++++..+..
T Consensus 45 l~~~i~g~~l~npi~~aag--~---~~~~--~~~~~~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~~~ 117 (336)
T 1f76_A 45 KPVNCMGLTFKNPLGLAAG--L---DKDG--ECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNN 117 (336)
T ss_dssp CCEEETTEEESSSEEECTT--S---STTC--CCHHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCCCB
T ss_pred CCeEECCEEcCCCcEeCcc--c---CCcH--HHHHHHHHcCccEEEeCCCCCCCCCCCCCcceeeccccceeeecCCCCC
Confidence 5799999999999999963 2 3322 3888899999998765332110
Q ss_pred --HHH----HhccCC-CCceEEeeecCC-------chHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCcc
Q 021739 54 --VEE----VSSTGP-GIRFFQLYVTKH-------RNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHL 119 (308)
Q Consensus 54 --~e~----i~~~~~-~~~~~Ql~~~~d-------~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v 119 (308)
.+. +..... .+.++|+. ..+ .+.+.+.++++.+ |++++++|+.||..
T Consensus 118 ~g~~~~~~~~~~~~~~~~~~v~i~-~~~~~~i~~~~~~~~~aa~~~~~-g~d~iein~~sP~~----------------- 178 (336)
T 1f76_A 118 LGVDNLVENVKKAHYDGVLGINIG-KNKDTPVEQGKDDYLICMEKIYA-YAGYIAINISSPNT----------------- 178 (336)
T ss_dssp CCHHHHHHHHHHCCCCSEEEEEEC-CCTTSCGGGTHHHHHHHHHHHGG-GCSEEEEECCCSSS-----------------
T ss_pred cCHHHHHHHHHhcccCCcEEEEec-CCCCCcccccHHHHHHHHHHHhc-cCCEEEEEccCCCC-----------------
Confidence 111 111111 24555654 222 3344444444443 56666666666542
Q ss_pred ccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhc---------CCCEEEEecC--CH----HHHHHHHH
Q 021739 120 TLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTIT---------SLPILVKGVL--TA----EDASLAIQ 184 (308)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~---------~~Pv~vK~~~--~~----e~a~~~~~ 184 (308)
++ ...+ .++.+.++.++++|+.+ ++||++|+.. +. +.++.+.+
T Consensus 179 ------------------~g-~~~~---~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~ 236 (336)
T 1f76_A 179 ------------------PG-LRTL---QYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVR 236 (336)
T ss_dssp ------------------TT-GGGG---GSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHH
T ss_pred ------------------CC-cccc---cCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHH
Confidence 00 1111 24566789999999987 8999999874 32 34789999
Q ss_pred cCCcEEEEeccc-ccCC---------C---CCc----chHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEE
Q 021739 185 YGAAGIIVSNHG-ARQL---------D---YVP----ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVF 247 (308)
Q Consensus 185 ~G~d~i~v~~~g-g~~~---------~---~~~----~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ 247 (308)
+|+|+|+++|++ +++. . .++ .++..+.++++.+.+++|||++|||+|++|+.+++++|||+|+
T Consensus 237 ~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~ 316 (336)
T 1f76_A 237 HNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQ 316 (336)
T ss_dssp TTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEE
T ss_pred cCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEE
Confidence 999999999874 2210 0 121 1346677887777668999999999999999999999999999
Q ss_pred EchHHHH
Q 021739 248 VGRPVPF 254 (308)
Q Consensus 248 ig~~~l~ 254 (308)
+||++++
T Consensus 317 igr~~l~ 323 (336)
T 1f76_A 317 IYSGFIF 323 (336)
T ss_dssp ESHHHHH
T ss_pred eeHHHHh
Confidence 9999997
No 27
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.89 E-value=4.4e-22 Score=190.48 Aligned_cols=123 Identities=22% Similarity=0.291 Sum_probs=100.7
Q ss_pred cCCC-EEEEecCC--HH----HHHHHHHcCCcEEEEecccccCCC--------C---Cc----chHHHHHHHHHHccCCC
Q 021739 164 TSLP-ILVKGVLT--AE----DASLAIQYGAAGIIVSNHGARQLD--------Y---VP----ATVMALEEVVQAAKGRV 221 (308)
Q Consensus 164 ~~~P-v~vK~~~~--~e----~a~~~~~~G~d~i~v~~~gg~~~~--------~---~~----~~~~~l~~i~~~~~~~i 221 (308)
.++| |++|+..+ .+ .++.+.++|+|+|+++|++....+ + ++ .++..+.++++.+..++
T Consensus 295 ~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~i 374 (443)
T 1tv5_A 295 KKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQI 374 (443)
T ss_dssp SSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCS
T ss_pred CCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCC
Confidence 4689 99999843 33 388999999999999997653211 1 11 13567788888776689
Q ss_pred eEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHcCCCCHhhhcccc
Q 021739 222 PVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNH 294 (308)
Q Consensus 222 pvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~~ 294 (308)
|||++|||+|++|+.+++++|||+|++||++++. |+ .++..++++++.+|...|+++++|+++..
T Consensus 375 PVIg~GGI~s~~DA~e~l~aGAd~Vqigrall~~----gP----~l~~~i~~~l~~~l~~~G~~si~e~~G~~ 439 (443)
T 1tv5_A 375 PIIASGGIFSGLDALEKIEAGASVCQLYSCLVFN----GM----KSAVQIKRELNHLLYQRGYYNLKEAIGRK 439 (443)
T ss_dssp CEEEESSCCSHHHHHHHHHTTEEEEEESHHHHHH----GG----GHHHHHHHHHHHHHHHHTCSSSGGGTTTT
T ss_pred cEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhc----Ch----HHHHHHHHHHHHHHHHhCCCCHHHHhhhh
Confidence 9999999999999999999999999999999973 44 36788899999999999999999998874
No 28
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.89 E-value=8.6e-22 Score=207.46 Aligned_cols=263 Identities=19% Similarity=0.195 Sum_probs=183.1
Q ss_pred ccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCCCHHHHhcc--C--CCCceEEeeecCCchHHHHHHHH
Q 021739 9 NISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSST--G--PGIRFFQLYVTKHRNVDAQLVKR 84 (308)
Q Consensus 9 ~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~~e~i~~~--~--~~~~~~Ql~~~~d~~~~~~~~~~ 84 (308)
++..||+++||+++.+ .++.+..|+++|++.|+.+.+++.. .+.+++.+. . ....+.|+. ......+...+
T Consensus 848 ~I~~Pf~isaMS~Gal-S~ea~~aLA~Aa~~aGg~~~tGeGg-~~pe~~~~~~~g~~~~~~IrQ~a-sg~FGVn~~~l-- 922 (1479)
T 1ea0_A 848 AIRKRFITPGMSMGAL-SPEAHGTLNVAMNRIGAKSDSGEGG-EDPARFRPDKNGDNWNSAIKQVA-SGRFGVTAEYL-- 922 (1479)
T ss_dssp HHHTTEEEEECCBTTB-CHHHHHHHHHHHHHTTCEEECCTTC-CCGGGSSBCTTSCBCCCSEEEEC-SSCTTCCHHHH--
T ss_pred cccCCeEecCcccccc-CHHHHHHHHHHHHHcCCeeEcCCCc-cCHHHhhhccccchhhhhhhhhc-CCCCCcChHHc--
Confidence 5688999999998755 5788899999999999988877653 344444321 1 113577876 33333322222
Q ss_pred HHHcCCcEEEEecCC---CCCCcchHHhhhccCCC-CccccccccccccccCCCCCCchhhhHhhhhccccc-C----HH
Q 021739 85 AERAGFKAIALTVDT---PRLGRREADIKNRFVLP-PHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL-N----WK 155 (308)
Q Consensus 85 ~~~~g~~~i~i~~~~---p~~~~r~~~~~~~~~~p-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~----~~ 155 (308)
..++.+.+.++- |..|- ..| .++.. .+. .++ + .+..+..++++.++++ + .+
T Consensus 923 ---~~a~~ieIKigQGAKpG~GG---------~Lp~~kv~~----~IA--~~R-~-~~~Gv~lisP~~~~d~~s~edl~~ 982 (1479)
T 1ea0_A 923 ---NQCRELEIKVAQGAKPGEGG---------QLPGFKVTE----MIA--RLR-H-STPGVMLISPPPHHDIYSIEDLAQ 982 (1479)
T ss_dssp ---TSCSEEEEECCCTTSTTTCC---------EECGGGCCH----HHH--HHH-T-CCTTCCEECCSSCTTCSSHHHHHH
T ss_pred ---cccchHHHHHhccCCCCcCC---------CCCHHHHHH----HHH--HHc-C-CCCCCCccCCCCCcCcCCHHHHHH
Confidence 356778887632 21100 000 01110 000 000 0 0111233444445454 2 35
Q ss_pred HHHHHHHhc-CCCEEEEecC---CHHHHHHHHHcCCcEEEEeccc-ccC-------CCCCcchHHHHHHHHHHc-----c
Q 021739 156 DVKWLQTIT-SLPILVKGVL---TAEDASLAIQYGAAGIIVSNHG-ARQ-------LDYVPATVMALEEVVQAA-----K 218 (308)
Q Consensus 156 ~i~~ir~~~-~~Pv~vK~~~---~~e~a~~~~~~G~d~i~v~~~g-g~~-------~~~~~~~~~~l~~i~~~~-----~ 218 (308)
.|+++|+.+ ++||++|++. ..++|..+.++|+|+|+++|++ |+. .+++.|+...|.++++.+ +
T Consensus 983 ~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~aL~ev~~al~~~glr 1062 (1479)
T 1ea0_A 983 LIYDLKQINPDAKVTVKLVSRSGIGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEMGLSEVHQVLTLNRLR 1062 (1479)
T ss_dssp HHHHHHHHCTTCEEEEEEECCTTHHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHHHHHHHHHHHHHTTTCT
T ss_pred HHHHHHHhCCCCCEEEEEcCCCChHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHHHHHHHHHHHHHHcCCC
Confidence 688999887 8999999985 3678999999999999999984 432 124567888888888764 3
Q ss_pred CCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHhccc---------------------------CCHHHHHHHHHHH
Q 021739 219 GRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAV---------------------------DGEAGVRKVLQML 271 (308)
Q Consensus 219 ~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~~~~---------------------------~G~~~v~~~i~~l 271 (308)
.++|||++|||+++.|++|++++||++|++||+|++++.| .|+++|.++++.+
T Consensus 1063 ~~VpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~a~gc~~~r~Ch~~~CP~Gvatqdp~l~~~~~gg~e~V~n~l~~l 1142 (1479)
T 1ea0_A 1063 HRVRLRTDGGLKTGRDIVIAAMLGAEEFGIGTASLIAMGCIMVRQCHSNTCPVGVCVQDDKLRQKFVGTPEKVVNLFTFL 1142 (1479)
T ss_dssp TTSEEEEESSCCSHHHHHHHHHTTCSEEECCHHHHHHHTCCCCCCTTTTCCTTSSSCCCTTGGGSCCCCHHHHHHHHHHH
T ss_pred CCceEEEECCCCCHHHHHHHHHcCCCeeeEcHHHHHHHHHHHHhhccCCCCCceeEEeCHHHHhhcCCchHHHHHHHHHH
Confidence 4799999999999999999999999999999999997643 3688999999999
Q ss_pred HHHHHHHHHHcCCCCHhhhccc-cee
Q 021739 272 RDEFELTMALSGCRSLKEITRN-HIV 296 (308)
Q Consensus 272 ~~~l~~~m~~~G~~~i~~l~~~-~~~ 296 (308)
.+||+.+|..+|+++++||++. ++.
T Consensus 1143 ~~ELr~~Ma~lG~~si~eL~g~~~ll 1168 (1479)
T 1ea0_A 1143 AEEVREILAGLGFRSLNEVIGRTDLL 1168 (1479)
T ss_dssp HHHHHHHHHHHTCSCSGGGTTCGGGE
T ss_pred HHHHHHHHHHhCCCCHHHHhCchhee
Confidence 9999999999999999999544 444
No 29
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.89 E-value=2.2e-21 Score=181.74 Aligned_cols=231 Identities=21% Similarity=0.243 Sum_probs=166.2
Q ss_pred Cceeec-CcccCCceEeccccCcccCCCHHHHHHHHHHH-HcCCceeecCCCCCCHHHH----hc---cCCCCceEEeee
Q 021739 1 MTTTVL-GFNISMPIMIAPTAFQKMAHPEGECATARAAS-AAGTIMTLSSWATSSVEEV----SS---TGPGIRFFQLYV 71 (308)
Q Consensus 1 ~~t~~~-g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~-~~g~~~~~s~~~~~~~e~i----~~---~~~~~~~~Ql~~ 71 (308)
|+|+|. +..+..||+.+||++. + +..++.+.. +-|+.+... ..+.++. .. ....+..+++..
T Consensus 34 l~t~l~~~~~l~~Pii~apM~~v--t----~~~lA~avA~~GGlgii~~---~~s~e~~~~~I~~vk~~~~~pvga~ig~ 104 (361)
T 3khj_A 34 LETKLTKNVSLKIPLISSAMDTV--T----EHLMAVGMARLGGIGIIHK---NMDMESQVNEVLKVKNSGGLRVGAAIGV 104 (361)
T ss_dssp CCEESSSSCEESSSEEECSSTTT--C----SHHHHHHHHHTTCEEEECS---SSCHHHHHHHHHHHHHTTCCCCEEEECT
T ss_pred CceecccccccCCCEEeecCCCC--C----cHHHHHHHHHcCCCeEEec---CCCHHHHHHHHHHHHhccCceEEEEeCC
Confidence 567776 6789999999999976 5 448888655 455555433 3344432 22 122255666652
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
.+ .+.++.+.++|++.|.|+.. . .++.
T Consensus 105 -~~----~e~a~~l~eaGad~I~ld~a--~----------------------------------------------G~~~ 131 (361)
T 3khj_A 105 -NE----IERAKLLVEAGVDVIVLDSA--H----------------------------------------------GHSL 131 (361)
T ss_dssp -TC----HHHHHHHHHTTCSEEEECCS--C----------------------------------------------CSBH
T ss_pred -CH----HHHHHHHHHcCcCeEEEeCC--C----------------------------------------------CCcH
Confidence 22 45667777899998877631 0 1222
Q ss_pred cCHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccC------CCCCcchHHHHHHHHHHcc-CCCeEE
Q 021739 152 LNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ------LDYVPATVMALEEVVQAAK-GRVPVF 224 (308)
Q Consensus 152 ~~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~------~~~~~~~~~~l~~i~~~~~-~~ipvi 224 (308)
...+.++++++.+++||+++.+.+.+.++.+.++|+|+|.++.++|.. ...+.+++..+.++++... .++|||
T Consensus 132 ~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVI 211 (361)
T 3khj_A 132 NIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPII 211 (361)
T ss_dssp HHHHHHHHHHHHCCCEEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHhcCCcEEEccCCCHHHHHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEE
Confidence 234678999998899999999999999999999999999996443321 1234567888877765432 269999
Q ss_pred EecCCCCHHHHHHHHHcCCCEEEEchHHHHh--------------------ccc--------------CC-------HH-
Q 021739 225 LDGGVRRGTDVFKALALGASGVFVGRPVPFS--------------------LAV--------------DG-------EA- 262 (308)
Q Consensus 225 a~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~--------------------~~~--------------~G-------~~- 262 (308)
++|||++++|+.+++++|||+|++|++|+.. |.+ ++ ++
T Consensus 212 A~GGI~~~~di~kala~GAd~V~vGs~~~~t~Esp~~~~~~~g~~~k~y~gm~s~~a~~~~~~~~y~~~~~~~~~~~~eg 291 (361)
T 3khj_A 212 ADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEKELIGDTVYKYYRGMGSVGAMKSGSGDRYFQEKRPENKMVPEG 291 (361)
T ss_dssp EESCCCSHHHHHHHHHHTCSEEEESTTTTTBTTSSCEEEEETTEEEEEC-------------------------------
T ss_pred EECCCCCHHHHHHHHHcCCCEEEEChhhhcCCcCCcchhhcCCeEEEEeeccchHHHHhccchhhhhcccccccccCCCc
Confidence 9999999999999999999999999988642 110 01 11
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHcCCCCHhhhccc
Q 021739 263 ---------GVRKVLQMLRDEFELTMALSGCRSLKEITRN 293 (308)
Q Consensus 263 ---------~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~ 293 (308)
.+.+++.++..+||..|.++|+.+|+||+++
T Consensus 292 ~~~~v~~~g~~~~~~~~~~~gl~~~~~~~g~~~~~~~~~~ 331 (361)
T 3khj_A 292 IEGRVKYKGEMEGVVYQLVGGLRSCMGYLGSASIEELWKK 331 (361)
T ss_dssp --CEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH
T ss_pred cEEeCCCCCCHHHHHHHHHHHHHHhhhhcCCccHHHHHhC
Confidence 2778999999999999999999999999865
No 30
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=99.88 E-value=3.7e-21 Score=203.08 Aligned_cols=265 Identities=18% Similarity=0.151 Sum_probs=182.4
Q ss_pred ccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCCCHHHHh------------------cc--C--CCCce
Q 021739 9 NISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVS------------------ST--G--PGIRF 66 (308)
Q Consensus 9 ~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~~e~i~------------------~~--~--~~~~~ 66 (308)
++..||+++||+++.+ .++.+..|+.+|++.|+...+++... +.+.+. .. . ....+
T Consensus 865 ~I~~Pfii~aMS~Gsl-S~ea~~aLA~Aas~aGg~~~tGeGg~-~pe~~~~eir~~~~~~~~~~p~~~~~~nG~~~~~~I 942 (1520)
T 1ofd_A 865 SIVKRFCTGGMSLGAL-SREAHETLAIAMNRLGAKSNSGEGGE-DVVRYLTLDDVDSEGNSPTLPHLHGLQNGDTANSAI 942 (1520)
T ss_dssp HHHTTEECCCBCTTTS-CHHHHHHHHHHHHHHTCBCEECTTCC-CGGGGSCCCCCCTTSCCTTSTTCCSCCTTCCCCCSE
T ss_pred cccCceEecCcCcccc-cHHHHHHHHHHHHHcCCceEeCCCCC-CHHHHHhhhccccccccccccccccccCcchHHHHH
Confidence 4688999999998754 46788999999999999998887643 333332 00 0 01357
Q ss_pred EEeeecCCchHHHHHHHHHHHcCCcEEEEecCC---CCCCcchHHhhhccCCC-CccccccccccccccCCCCCCchhhh
Q 021739 67 FQLYVTKHRNVDAQLVKRAERAGFKAIALTVDT---PRLGRREADIKNRFVLP-PHLTLKNYEGLYIGKMDKTDDSGLAS 142 (308)
Q Consensus 67 ~Ql~~~~d~~~~~~~~~~~~~~g~~~i~i~~~~---p~~~~r~~~~~~~~~~p-~~v~~~~~~~~~~~~~~~~~~~~~~~ 142 (308)
.|+- ......+...+. .++.|.+.++- |..| ...| .+|.. .... +. + .+..+.
T Consensus 943 ~Ql~-sg~FGVn~~~l~-----~ad~IeIKi~QGAKpG~G---------G~Lp~~kV~~---~iA~---~R-~-~~~Gv~ 999 (1520)
T 1ofd_A 943 KQIA-SGRFGVTPEYLM-----SGKQLEIKMAQGAKPGEG---------GQLPGKKVSE---YIAM---LR-R-SKPGVT 999 (1520)
T ss_dssp EEEC-TTCTTCCHHHHH-----HCSEEEEECCCTTSTTSC---------CEECGGGCCH---HHHH---HH-T-SCTTCC
T ss_pred HHhc-CCCCccChhhcc-----chHHHHHHHhccCCCCCC---------CCCCHHHHHH---HHHH---Hc-C-CCCCCC
Confidence 7874 222222222222 26778877631 2110 0001 01110 0000 00 0 011123
Q ss_pred Hhhhhccccc-C----HHHHHHHHHhc-CCCEEEEecC---CHHHHHHHHHcCCcEEEEeccc-ccC-------CCCCcc
Q 021739 143 YVANQIDRSL-N----WKDVKWLQTIT-SLPILVKGVL---TAEDASLAIQYGAAGIIVSNHG-ARQ-------LDYVPA 205 (308)
Q Consensus 143 ~~~~~~d~~~-~----~~~i~~ir~~~-~~Pv~vK~~~---~~e~a~~~~~~G~d~i~v~~~g-g~~-------~~~~~~ 205 (308)
.++++.++++ + .+.|+++|+.+ ++||++|++. ..++|..+.++|+|+|+++|++ |+. .+++.|
T Consensus 1000 lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~kAGAD~IvVsG~eGGTgasp~~~~~~~GlP 1079 (1520)
T 1ofd_A 1000 LISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSP 1079 (1520)
T ss_dssp EECCSSCTTCSSHHHHHHHHHHHHHHCTTSEEEEEEECSTTHHHHHHHHHHTTCSEEEEECTTCCCSSEEHHHHHHBCCC
T ss_pred eeCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEecCCCChHHHHHHHHHcCCCEEEEeCCCCccCCCcchhhcCCchh
Confidence 3445455555 2 35688999887 8999999985 3578999999999999999985 432 124567
Q ss_pred hHHHHHHHHHHc-----cCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHhccc----------------------
Q 021739 206 TVMALEEVVQAA-----KGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAV---------------------- 258 (308)
Q Consensus 206 ~~~~l~~i~~~~-----~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~~~~---------------------- 258 (308)
+...|.++++.+ +.++|||++|||+++.|++|++++||++|++||+|++++.|
T Consensus 1080 t~~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~algc~~~r~Ch~~~CP~Gvatqdp~L 1159 (1520)
T 1ofd_A 1080 WELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIAEGCIMARVCHTNNCPVGVATQQERL 1159 (1520)
T ss_dssp HHHHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHTTCSEEECSHHHHHHTTCCCCCCGGGTCCTTSSSCCCHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeEEcHHHHHHHHHHHHHhccCCCCCceeEeeCHHH
Confidence 788888887754 34799999999999999999999999999999999998644
Q ss_pred -----CCHHHHHHHHHHHHHHHHHHHHHcCCCCHhhhc-ccceecc
Q 021739 259 -----DGEAGVRKVLQMLRDEFELTMALSGCRSLKEIT-RNHIVTH 298 (308)
Q Consensus 259 -----~G~~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~-~~~~~~~ 298 (308)
.++++|.++++.+.+||+.+|..+|+++++||+ +.++...
T Consensus 1160 ~~~~~gg~e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~gr~dll~~ 1205 (1520)
T 1ofd_A 1160 RQRFKGVPGQVVNFFYFIAEEVRSLLAHLGYRSLDDIIGRTDLLKV 1205 (1520)
T ss_dssp HTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCSCGGGTTTCGGGEEE
T ss_pred HhhcCCcHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhCcceEEec
Confidence 267899999999999999999999999999995 4455543
No 31
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.86 E-value=1.9e-20 Score=175.28 Aligned_cols=236 Identities=20% Similarity=0.247 Sum_probs=166.9
Q ss_pred Cceeec-CcccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCCCHHHHh----ccCC-CCceEEeeecCC
Q 021739 1 MTTTVL-GFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVS----STGP-GIRFFQLYVTKH 74 (308)
Q Consensus 1 ~~t~~~-g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~~e~i~----~~~~-~~~~~Ql~~~~d 74 (308)
|+|+|. ...+..||+.|||++. + +..++.+..+.|...++.. ..+.++.. .... ++..+.+-.+.+
T Consensus 35 l~t~lt~~~~l~~Pii~apM~~v--s----~~~lA~avA~aGGlg~i~~--~~s~e~~~~~i~~vk~~~~l~vga~vg~~ 106 (366)
T 4fo4_A 35 LRTRLTKNIALNIPMVSASMDTV--T----EARLAIALAQEGGIGFIHK--NMSIEQQAAQVHQVKISGGLRVGAAVGAA 106 (366)
T ss_dssp CCEEEETTEEESSSEEECCCTTT--C----SHHHHHHHHHTTCEEEECS--SSCHHHHHHHHHHHHTTTSCCCEEECCSC
T ss_pred cceecccccccCCCEEeCCCCCC--C----hHHHHHHHHHcCCceEeec--CCCHHHHHHHHHHHHhcCceeEEEEeccC
Confidence 467776 5678999999999876 5 4588877777665544542 34554432 1111 233333332222
Q ss_pred chHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCH
Q 021739 75 RNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNW 154 (308)
Q Consensus 75 ~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 154 (308)
+ ...+.++.+.++|++.|.|+.. . .+++...
T Consensus 107 ~-~~~~~~~~lieaGvd~I~idta--~----------------------------------------------G~~~~~~ 137 (366)
T 4fo4_A 107 P-GNEERVKALVEAGVDVLLIDSS--H----------------------------------------------GHSEGVL 137 (366)
T ss_dssp T-TCHHHHHHHHHTTCSEEEEECS--C----------------------------------------------TTSHHHH
T ss_pred h-hHHHHHHHHHhCCCCEEEEeCC--C----------------------------------------------CCCHHHH
Confidence 2 2344567777899999877631 0 0111224
Q ss_pred HHHHHHHHhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEecccccC------CCCCcchHHHHHHHHHHcc-CCCeEEEe
Q 021739 155 KDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ------LDYVPATVMALEEVVQAAK-GRVPVFLD 226 (308)
Q Consensus 155 ~~i~~ir~~~-~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~------~~~~~~~~~~l~~i~~~~~-~~ipvia~ 226 (308)
+.|+++++.+ ++||+++.+.+.++++.+.++|+|+|.++...|.. ...+.+.+..+.++.+... .++|||++
T Consensus 138 ~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVIA~ 217 (366)
T 4fo4_A 138 QRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIAD 217 (366)
T ss_dssp HHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEE
T ss_pred HHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhhcCCeEEEe
Confidence 6789999887 89999998999999999999999999994332221 1234677888888876442 37999999
Q ss_pred cCCCCHHHHHHHHHcCCCEEEEchHHHHh--------------------ccc------------------------CCH-
Q 021739 227 GGVRRGTDVFKALALGASGVFVGRPVPFS--------------------LAV------------------------DGE- 261 (308)
Q Consensus 227 GGI~~~~d~~k~l~~GAd~V~ig~~~l~~--------------------~~~------------------------~G~- 261 (308)
|||+++.|+.+++++|||+|++|++|+.. +++ +|.
T Consensus 218 GGI~~~~di~kala~GAd~V~vGs~f~~t~Esp~~~~~~~g~~~k~y~gm~s~~am~~~~~~ry~~~~~~~~~~~~eg~~ 297 (366)
T 4fo4_A 218 GGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIE 297 (366)
T ss_dssp SCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEEETTEEEEEEECTTSHHHHCC---------------CCCSBCE
T ss_pred CCCCCHHHHHHHHHcCCCEEEEChHhhcCCCCCchhhhhCCceeEEeeccccHHHHhcccccchhccccccccccCCCcE
Confidence 99999999999999999999999998642 110 000
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHcCCCCHhhhccc
Q 021739 262 ------AGVRKVLQMLRDEFELTMALSGCRSLKEITRN 293 (308)
Q Consensus 262 ------~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~ 293 (308)
-.+.+++.++..+||..|.++|+.+|+||+++
T Consensus 298 ~~v~~~g~~~~~~~~~~~glr~~~~y~g~~~~~~~~~~ 335 (366)
T 4fo4_A 298 GRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTK 335 (366)
T ss_dssp EEEECCBCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred EecCCCCCHHHHHHHHHHHHHHhhhccCcccHHHHHhC
Confidence 12778999999999999999999999999865
No 32
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.85 E-value=1e-19 Score=171.95 Aligned_cols=141 Identities=25% Similarity=0.348 Sum_probs=112.9
Q ss_pred CHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEeccccc-----CC-CCCcchHHHHHHHHHHcc-CCCeEEE
Q 021739 153 NWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGAR-----QL-DYVPATVMALEEVVQAAK-GRVPVFL 225 (308)
Q Consensus 153 ~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~-----~~-~~~~~~~~~l~~i~~~~~-~~ipvia 225 (308)
..+.|+++++.+++||+++.+.+.++++.+.++|+|+|.++..+|. .. ..+.+++..+.++++.+. .++|||+
T Consensus 172 ~~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA 251 (400)
T 3ffs_A 172 IIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIA 251 (400)
T ss_dssp HHHHHHHHHTTCCCEEEEEEECSHHHHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEE
T ss_pred HHHHHHHHHhcCCCeEEEeecCCHHHHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEe
Confidence 3578999999889999999999999999999999999999533221 11 124578888888877653 3799999
Q ss_pred ecCCCCHHHHHHHHHcCCCEEEEchHHHHh--------------------ccc--------------CC-------HH--
Q 021739 226 DGGVRRGTDVFKALALGASGVFVGRPVPFS--------------------LAV--------------DG-------EA-- 262 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~--------------------~~~--------------~G-------~~-- 262 (308)
+|||+++.|+.+++++|||+|++|++|+.. |++ ++ ++
T Consensus 252 ~GGI~~~~di~kalalGAd~V~vGt~f~~t~Es~~~~~~~~g~~~k~y~Gm~s~~am~~~~~~ry~~~~~~~~~~~~eG~ 331 (400)
T 3ffs_A 252 DGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEKELIGDTVYKYYRGMGSVGAMKSGSGDRYFQEKRPENKMVPEGI 331 (400)
T ss_dssp ESCCCSHHHHHHHHTTTCSEEEECGGGTTBTTSSCCEEESSSSEEEC---------------------------------
T ss_pred cCCCCCHHHHHHHHHcCCCEEEEChHHhcCCCCCchhhhcCCeeeeeecCcchHHHHhccccchhhcccccccccCCCCc
Confidence 999999999999999999999999998642 210 00 11
Q ss_pred --------HHHHHHHHHHHHHHHHHHHcCCCCHhhhccc
Q 021739 263 --------GVRKVLQMLRDEFELTMALSGCRSLKEITRN 293 (308)
Q Consensus 263 --------~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~ 293 (308)
.+.+++.++..+||..|.++|+.+|+||+++
T Consensus 332 ~~~v~~~g~~~~~~~~~~~glr~~~~y~G~~~i~el~~~ 370 (400)
T 3ffs_A 332 EGRVKYKGEMEGVVYQLVGGLRSCMGYLGSASIEELWKK 370 (400)
T ss_dssp --CEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH
T ss_pred EEecCCCCCHHHHHHHHHHHHHHhhhhcCcccHHHHHhC
Confidence 2778999999999999999999999999865
No 33
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=99.84 E-value=1.9e-19 Score=168.63 Aligned_cols=243 Identities=17% Similarity=0.129 Sum_probs=157.5
Q ss_pred CceeecCcccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeec-CCCCC--------------------------C
Q 021739 1 MTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLS-SWATS--------------------------S 53 (308)
Q Consensus 1 ~~t~~~g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s-~~~~~--------------------------~ 53 (308)
|+|+++|.++++||++|+-.. +. +....+.+.+.|.++++. +.... .
T Consensus 37 L~v~~~Gl~f~NPvglAaG~~----~~--~~e~~~~l~~~G~G~v~~~tvt~~pq~GNp~PR~~~l~~~~iN~~G~~n~G 110 (354)
T 3tjx_A 37 LQVNLLNNTFANPFMNAAGVM----CT--TTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNG 110 (354)
T ss_dssp CCEEETTEEESSSEEECTTSS----CS--SHHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCC
T ss_pred eeEEECCEEcCCCcEEccCCC----CC--CHHHHHHHHHcCCCEEEeCCcCcccccCCCCCeEEEcccccccccccCCHH
Confidence 689999999999999997322 22 456777788888776543 21110 1
Q ss_pred H----HHHhccCC---CCceEEeeecCCchHHHHHHHHHHH---cCCcEEEEecCCCCCCcchHHhhhccCCCCcccccc
Q 021739 54 V----EEVSSTGP---GIRFFQLYVTKHRNVDAQLVKRAER---AGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKN 123 (308)
Q Consensus 54 ~----e~i~~~~~---~~~~~Ql~~~~d~~~~~~~~~~~~~---~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~ 123 (308)
. +++..... .+.++++. ..+.+...+..+++.+ .+++++++|+.||.. |
T Consensus 111 ~~~~~~~~~~~~~~~~~pvivsi~-g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~-------------~------- 169 (354)
T 3tjx_A 111 FDFYLAYAAEQHDYGKKPLFLSMS-GLSMRENVEMCKRLAAVATEKGVILELNLSCPNV-------------P------- 169 (354)
T ss_dssp HHHHHHHHHHTCCTTTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECC-------------------------
T ss_pred HHHHHHHHHHhhccCCceEEEEEe-cCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCC-------------c-------
Confidence 1 22222211 26788887 6666655555554433 378899999999853 0
Q ss_pred ccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhcCCCEEEEecCCH------HHHHHHHHcC-CcEEEEeccc
Q 021739 124 YEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTA------EDASLAIQYG-AAGIIVSNHG 196 (308)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~~~Pv~vK~~~~~------e~a~~~~~~G-~d~i~v~~~g 196 (308)
+ ...++ .+++...+.++++++.++.|+.+|..... ..+..+.+.+ ++.+...++.
T Consensus 170 ---------------g-~~~l~--~~~~~~~~i~~~v~~~~~~pv~vK~~p~~~~~~~~~~~~~~~~~~~~~~i~~i~t~ 231 (354)
T 3tjx_A 170 ---------------G-KPQVA--YDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAAFDAAAEILNEFPKVQFITCINSI 231 (354)
T ss_dssp --------------------CT--TSHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCE
T ss_pred ---------------c-hhhhc--cCHHHHHHHHHHHHHHhhcccccccCCCCCchhHHHHHHHHHhhcccchhheeccc
Confidence 0 00011 23444567789999999999999987432 1234444444 4444433211
Q ss_pred c-------------------cCCCCCcchH----HHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHH
Q 021739 197 A-------------------RQLDYVPATV----MALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVP 253 (308)
Q Consensus 197 g-------------------~~~~~~~~~~----~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l 253 (308)
. .+..++++.+ ..+.++++.+ .++|||++|||+|++|+++++.+|||+||+||+++
T Consensus 232 ~~~~~id~~~~~~~~~~~~~~GGlSG~~~~~~a~~~v~~~~~~~-~~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~ 310 (354)
T 3tjx_A 232 GNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRC-PGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQ 310 (354)
T ss_dssp EEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHHTEEEEEECHHHH
T ss_pred ccccccccccccccccCcccccccCchhhHHHHHHHHHHHHHhc-CCCcEEEeCCcCCHHHHHHHHHcCCCEEEEChhhh
Confidence 0 0011234333 3344555444 36999999999999999999999999999999998
Q ss_pred HhcccCCHHHHHHHHHHHHHHHHHHHHHcCCCCHhhhcccceec
Q 021739 254 FSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNHIVT 297 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~~~~~ 297 (308)
+. |+ .++..++++|+.+|+..|+++++|+++..-..
T Consensus 311 y~----GP----~~~~~I~~~L~~~L~~~G~~si~e~~G~~~~l 346 (354)
T 3tjx_A 311 EE----GP----SIFERLTSELLGVMAKKRYQTLDEFRGKVRTL 346 (354)
T ss_dssp HH----CT----THHHHHHHHHHHHHHHHTCCSGGGTTTCCBCC
T ss_pred hc----Cc----hHHHHHHHHHHHHHHHcCCCCHHHHhChhhcC
Confidence 74 66 36788999999999999999999999875433
No 34
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.78 E-value=2.7e-17 Score=158.18 Aligned_cols=142 Identities=23% Similarity=0.343 Sum_probs=116.7
Q ss_pred cCHHHHHHHHHhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEecccccC------CCCCcchHHHHHHHHHHccC-CCeE
Q 021739 152 LNWKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ------LDYVPATVMALEEVVQAAKG-RVPV 223 (308)
Q Consensus 152 ~~~~~i~~ir~~~-~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~------~~~~~~~~~~l~~i~~~~~~-~ipv 223 (308)
..++.++++|+.+ ++||++..+.+.+.++.|.++|||+|.|.-.+|.. ..-+.|...++.+++++... .+||
T Consensus 308 ~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpv 387 (556)
T 4af0_A 308 YQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPC 387 (556)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCE
T ss_pred HHHHHHHHHHhhCCcceEEeccccCHHHHHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCE
Confidence 3468899999987 79999999999999999999999999997655521 12356888999888776543 6999
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEEchHHH--------------------Hhccc-------------------------
Q 021739 224 FLDGGVRRGTDVFKALALGASGVFVGRPVP--------------------FSLAV------------------------- 258 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~GAd~V~ig~~~l--------------------~~~~~------------------------- 258 (308)
|++|||++..|+.|||++|||+||+|+.|- ++|++
T Consensus 388 IADGGI~~sGDi~KAlaaGAd~VMlGsllAGt~EsPGe~~~~~G~~~K~YrGMgS~~Am~~~~~~~~~~~~~~~~~~~~s 467 (556)
T 4af0_A 388 IADGGIGNIGHIAKALALGASAVMMGGLLAGTTESPGEYFYHEGKRVKVYRGMGSIEAMEHTQRGSASGKRSILGLDNAA 467 (556)
T ss_dssp EEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEEETTEEEEEEECTTSHHHHTTC------------CCSCSS
T ss_pred EecCCcCcchHHHHHhhcCCCEEEEchhhccccCCCCcEEEECCEEEEeecccccHHHHHhcccCCcccccccccccccc
Confidence 999999999999999999999999999873 11111
Q ss_pred --------------CCH-------HHHHHHHHHHHHHHHHHHHHcCCCCHhhhccc
Q 021739 259 --------------DGE-------AGVRKVLQMLRDEFELTMALSGCRSLKEITRN 293 (308)
Q Consensus 259 --------------~G~-------~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~ 293 (308)
+|. -.+.+++.++..+||..|.++|+.+|.||+..
T Consensus 468 ~dRyfq~~~~~~v~EGveg~VpykG~v~~~i~~l~gGlrs~m~y~Ga~~i~el~~~ 523 (556)
T 4af0_A 468 TARYFSEADAVKVAQGVSGDVADKGSINKFVPYLFTGLQHSLQDAAIKSVSELHSC 523 (556)
T ss_dssp EEECCCBSSSSCBCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH
T ss_pred hhhhcccccccccCCccEEeccCCCcHHHHHHHHHHHHHHhhhccCCCcHHHHHHh
Confidence 010 02789999999999999999999999999875
No 35
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.77 E-value=7.8e-18 Score=165.02 Aligned_cols=140 Identities=25% Similarity=0.300 Sum_probs=109.0
Q ss_pred cCHHHHHHHHHhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEecccccC------CCCCcchH---HHHHHHHHHccCCC
Q 021739 152 LNWKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ------LDYVPATV---MALEEVVQAAKGRV 221 (308)
Q Consensus 152 ~~~~~i~~ir~~~-~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~------~~~~~~~~---~~l~~i~~~~~~~i 221 (308)
..++.++++++.+ ++||++|.+.+.++++.+.++|+|+|.+++++|.. ...+.+.. ..+.++++.+ ++
T Consensus 282 ~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~--~i 359 (514)
T 1jcn_A 282 YQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRF--GV 359 (514)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGG--TC
T ss_pred hHHHHHHHHHHhCCCCceEecccchHHHHHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhC--CC
Confidence 3468899999998 89999999999999999999999999996543321 11233333 3444444443 79
Q ss_pred eEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHh--------------------ccc---------------------CC
Q 021739 222 PVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS--------------------LAV---------------------DG 260 (308)
Q Consensus 222 pvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~--------------------~~~---------------------~G 260 (308)
|||++|||+++.|+.|++++|||+|++||+|+.. +.. .+
T Consensus 360 pVia~GGI~~~~di~kala~GAd~V~iG~~~l~~~e~~~~~~~~~g~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~ 439 (514)
T 1jcn_A 360 PIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEYFFSDGVRLKKYRGMGSLDAMEKSSSSQKRYFSEGDKVKI 439 (514)
T ss_dssp CEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTSTTSSCC----------------------------------------
T ss_pred CEEEECCCCCHHHHHHHHHcCCCeeeECHHHHcCCcCCcceEeECCEEEEEecCcCCHHHHhhccccchhhcccccccee
Confidence 9999999999999999999999999999998652 110 01
Q ss_pred HHHH----------HHHHHHHHHHHHHHHHHcCCCCHhhhccc
Q 021739 261 EAGV----------RKVLQMLRDEFELTMALSGCRSLKEITRN 293 (308)
Q Consensus 261 ~~~v----------~~~i~~l~~~l~~~m~~~G~~~i~~l~~~ 293 (308)
++++ .++++.|..+|+..|.++|+++++||++.
T Consensus 440 ~~gv~~~~~~~g~~~~~i~~l~~~l~~~m~~~G~~~i~~l~~~ 482 (514)
T 1jcn_A 440 AQGVSGSIQDKGSIQKFVPYLIAGIQHGCQDIGARSLSVLRSM 482 (514)
T ss_dssp ----------CCCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred cccceecCCCcccHHHHHHHHHHHHHHHHHhhCcccHHHHHhh
Confidence 2444 89999999999999999999999999985
No 36
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.76 E-value=7.3e-18 Score=164.79 Aligned_cols=141 Identities=25% Similarity=0.285 Sum_probs=114.7
Q ss_pred CHHHHHHHHHhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEecccccC------CCCCcchHHHHHHHHHHccC-CCeEE
Q 021739 153 NWKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ------LDYVPATVMALEEVVQAAKG-RVPVF 224 (308)
Q Consensus 153 ~~~~i~~ir~~~-~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~------~~~~~~~~~~l~~i~~~~~~-~ipvi 224 (308)
.++.++++++.+ ++||+++.+.+.+.++.+.++|+|+|.++.++|.. ...+.+++..+.++++.+.. ++|||
T Consensus 284 v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVI 363 (511)
T 3usb_A 284 VIDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVI 363 (511)
T ss_dssp HHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEE
T ss_pred hhhHHHHHHHhCCCceEEeeeeccHHHHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEE
Confidence 357899999987 58999999999999999999999999985544431 12356788888887665532 69999
Q ss_pred EecCCCCHHHHHHHHHcCCCEEEEchHHHHhccc------------------------------------------CCHH
Q 021739 225 LDGGVRRGTDVFKALALGASGVFVGRPVPFSLAV------------------------------------------DGEA 262 (308)
Q Consensus 225 a~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~~~~------------------------------------------~G~~ 262 (308)
++|||+++.|+.|++++|||+|++||+|+....+ +|.+
T Consensus 364 a~GGI~~~~di~kala~GA~~V~vGs~~~~~~es~g~~~~~~g~~~k~~~gm~s~~a~~~~~~~r~~~~~~~~~~~eG~~ 443 (511)
T 3usb_A 364 ADGGIKYSGDMVKALAAGAHVVMLGSMFAGVAESPGETEIYQGRQFKVYRGMGSVGAMEKGSKDRYFQEGNKKLVPEGIE 443 (511)
T ss_dssp EESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCEEECSSSEEEC--------------------------------
T ss_pred EeCCCCCHHHHHHHHHhCchhheecHHHhcCccCchhhhhccCeeeeeeeccccHHHHhcccccchhccccccccCCCcE
Confidence 9999999999999999999999999998543211 1212
Q ss_pred -------HHHHHHHHHHHHHHHHHHHcCCCCHhhhccc
Q 021739 263 -------GVRKVLQMLRDEFELTMALSGCRSLKEITRN 293 (308)
Q Consensus 263 -------~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~ 293 (308)
.+.++++.+..+|+..|.++|+.++.+|++.
T Consensus 444 ~~~~~~~~~~~~~~~~~~~lr~~m~~~G~~~i~~l~~~ 481 (511)
T 3usb_A 444 GRVPYKGPLADTVHQLVGGLRAGMGYCGAQDLEFLREN 481 (511)
T ss_dssp --CBCCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHhcCcccHHHHHhC
Confidence 2678999999999999999999999999875
No 37
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.76 E-value=2e-17 Score=160.96 Aligned_cols=141 Identities=21% Similarity=0.334 Sum_probs=115.2
Q ss_pred CHHHHHHHHHhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEecccccC------CCCCcchHHHHHHHHHHcc-CCCeEE
Q 021739 153 NWKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ------LDYVPATVMALEEVVQAAK-GRVPVF 224 (308)
Q Consensus 153 ~~~~i~~ir~~~-~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~------~~~~~~~~~~l~~i~~~~~-~~ipvi 224 (308)
.++.++++++.+ ++||+++.+.+.+.++.+.++|+|+|.++..+|.. ...+.+++..+.++.+.++ .++|||
T Consensus 257 ~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVI 336 (490)
T 4avf_A 257 VIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLI 336 (490)
T ss_dssp HHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEE
T ss_pred HHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEE
Confidence 357899999988 78999999999999999999999999996443321 1235678889999887663 369999
Q ss_pred EecCCCCHHHHHHHHHcCCCEEEEchHHHHh--------------------ccc--------------------------
Q 021739 225 LDGGVRRGTDVFKALALGASGVFVGRPVPFS--------------------LAV-------------------------- 258 (308)
Q Consensus 225 a~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~--------------------~~~-------------------------- 258 (308)
++|||+++.|+.+++++|||+||+|++|+.. |++
T Consensus 337 a~GGI~~~~di~kal~~GAd~V~vGs~~~~~~Esp~~~~~~~g~~~k~~~gm~s~~a~~~~~~~~~r~~~~~~~~~~~~~ 416 (490)
T 4avf_A 337 ADGGIRFSGDLAKAMVAGAYCVMMGSMFAGTEEAPGEIELFQGRSYKSYRGMGSLGAMSGSQGSSDRYFQDASAGAEKLV 416 (490)
T ss_dssp EESCCCSHHHHHHHHHHTCSEEEECTTTTTBTTSSSCEEEETTEEEEC--------------------------------
T ss_pred EeCCCCCHHHHHHHHHcCCCeeeecHHHhcCCCCCCceEeECCeEeeeecCcccHHHHhhcccccchhhccccccccccc
Confidence 9999999999999999999999999988542 111
Q ss_pred -CCHH-------HHHHHHHHHHHHHHHHHHHcCCCCHhhhccc
Q 021739 259 -DGEA-------GVRKVLQMLRDEFELTMALSGCRSLKEITRN 293 (308)
Q Consensus 259 -~G~~-------~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~ 293 (308)
+|.+ .+.+++..+..+|+..|.++|+.+|.||+++
T Consensus 417 ~eg~~~~v~~~g~~~~~~~~~~~~lr~~~~~~g~~~i~~l~~~ 459 (490)
T 4avf_A 417 PEGIEGRVPYKGALSAIVHQLMGGLRAAMGYTGSADIQQMRTQ 459 (490)
T ss_dssp -------CBCCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHS
T ss_pred CCCcEEcCCcCCCHHHHHHHHHHHHHHHHHhcCcCcHHHHHhC
Confidence 1111 3668999999999999999999999999876
No 38
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.76 E-value=1.7e-17 Score=161.93 Aligned_cols=143 Identities=27% Similarity=0.393 Sum_probs=117.0
Q ss_pred cCHHHHHHHHHhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEecccccC-----C-CCCcchHHHHHHHHHHccC-CCeE
Q 021739 152 LNWKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ-----L-DYVPATVMALEEVVQAAKG-RVPV 223 (308)
Q Consensus 152 ~~~~~i~~ir~~~-~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~-----~-~~~~~~~~~l~~i~~~~~~-~ipv 223 (308)
..++.++++++.+ ++||+++.+.+.++++.+.++|+|+|.+++++|.. . ..+.++...+.++.+.+.. ++||
T Consensus 264 ~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipv 343 (494)
T 1vrd_A 264 RVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPI 343 (494)
T ss_dssp HHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCE
T ss_pred HHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCCCE
Confidence 3578999999998 79999999999999999999999999998776521 1 1245677888888766433 7999
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEEchHHHH--------------------hccc-----CC--------------HHH-
Q 021739 224 FLDGGVRRGTDVFKALALGASGVFVGRPVPF--------------------SLAV-----DG--------------EAG- 263 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~--------------------~~~~-----~G--------------~~~- 263 (308)
|++|||+++.|+.+++++|||+|++||+|+. ++++ .| .++
T Consensus 344 ia~GGI~~~~di~kala~GAd~V~iGr~~l~~~e~~~~~~~~~~~~~k~~~g~~~~~a~~~g~~~~~~~~~~~~~~~~g~ 423 (494)
T 1vrd_A 344 IADGGIRYSGDIVKALAAGAESVMVGSIFAGTEEAPGETILYQGRKYKAYRGMGSLGAMRSGSADRYGQEGENKFVPEGI 423 (494)
T ss_dssp EEESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSEEEEETTEEEEECBCCC-------------------------C
T ss_pred EEECCcCCHHHHHHHHHcCCCEEEECHHHhcCCcCCcceEEECCEEEEEEeccchHHHHhhccccchhhcccccccCCcc
Confidence 9999999999999999999999999999973 2211 01 133
Q ss_pred ---------HHHHHHHHHHHHHHHHHHcCCCCHhhhcccc
Q 021739 264 ---------VRKVLQMLRDEFELTMALSGCRSLKEITRNH 294 (308)
Q Consensus 264 ---------v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~~ 294 (308)
+.++++.+.++|+..|.++|+.++.+|++..
T Consensus 424 ~~~~~~~~~v~~~~~~l~~~l~~~~~~~G~~~~~~l~~~~ 463 (494)
T 1vrd_A 424 EGMVPYKGTVKDVVHQLVGGLRSGMGYIGARTIKELQEKA 463 (494)
T ss_dssp BCCEECCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHC
T ss_pred eEccCcCCCHHHHHHHHHHHHHHHhhhcCCCCHHHHHhhC
Confidence 6799999999999999999999999998764
No 39
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.76 E-value=1e-17 Score=163.73 Aligned_cols=145 Identities=17% Similarity=0.236 Sum_probs=117.7
Q ss_pred cCHHHHHHHHHhc-C-CCEEEEecCCHHHHHHHHHcCCcEEEEeccccc-----C-CCCCcchHHHHHHHHHHccC----
Q 021739 152 LNWKDVKWLQTIT-S-LPILVKGVLTAEDASLAIQYGAAGIIVSNHGAR-----Q-LDYVPATVMALEEVVQAAKG---- 219 (308)
Q Consensus 152 ~~~~~i~~ir~~~-~-~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~-----~-~~~~~~~~~~l~~i~~~~~~---- 219 (308)
..++.++++++.+ + +|++++.+.+.+.++.+.++|+|+|.++.++|. . ..++.|+...+.++.+.+..
T Consensus 269 ~~~~~i~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~aGad~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~ 348 (503)
T 1me8_A 269 WQKITIGWIREKYGDKVKVGAGNIVDGEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEE 348 (503)
T ss_dssp HHHHHHHHHHHHHGGGSCEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHhCCCCceEeeccccCHHHHHHHHHhCCCeEEecccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhh
Confidence 3567889999886 5 899999999999999999999999999554432 1 12467888888888765431
Q ss_pred ---CCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH--------------------hcccCCH---------------
Q 021739 220 ---RVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF--------------------SLAVDGE--------------- 261 (308)
Q Consensus 220 ---~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~--------------------~~~~~G~--------------- 261 (308)
++|||++|||+++.|+.|||++|||+|++|++|+. ++++.|+
T Consensus 349 ~~~~ipvia~GGi~~~~di~kAlalGA~~V~iG~~~~~~~E~~~~~~~~~g~~~k~~~g~~s~~~~~~~~~~~~~~~~~~ 428 (503)
T 1me8_A 349 TGIYIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSSRARNWQRYDLGGKQKLS 428 (503)
T ss_dssp HSEECCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSCEEEETTEEEEEEECTTSHHHHCC------------
T ss_pred cCCCceEEEeCCCCCHHHHHHHHHcCCCEEEECchhhccccCCCceEEECCeEEEeecCccchhHhhcccccccccccee
Confidence 59999999999999999999999999999999963 2221111
Q ss_pred ------------HHHHHHHHHHHHHHHHHHHHcCCCCHhhhcc-ccee
Q 021739 262 ------------AGVRKVLQMLRDEFELTMALSGCRSLKEITR-NHIV 296 (308)
Q Consensus 262 ------------~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~-~~~~ 296 (308)
.++.++++.|..+|+..|.++|+.++++|++ ..++
T Consensus 429 ~~eg~~~~~~~~~~v~~~~~~~~~~l~~~m~~~G~~~i~~l~~~~~~~ 476 (503)
T 1me8_A 429 FEEGVDSYVPYAGKLKDNVEASLNKVKSTMCNCGALTIPQLQSKAKIT 476 (503)
T ss_dssp --CCCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHHCCEE
T ss_pred cccceeEecCCCCcHHHHHHHHHHHHHHHHHhcCcchHHHHHhCCCEE
Confidence 2477999999999999999999999999987 3433
No 40
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=99.75 E-value=1.7e-16 Score=147.70 Aligned_cols=226 Identities=16% Similarity=0.130 Sum_probs=149.4
Q ss_pred eeecCcccCCceEeccccCcccC----CC-HHHHH-HHHHHHHcCCceeecCCCCC--------------C------HHH
Q 021739 3 TTVLGFNISMPIMIAPTAFQKMA----HP-EGECA-TARAASAAGTIMTLSSWATS--------------S------VEE 56 (308)
Q Consensus 3 t~~~g~~~~~Pi~iapm~~~~~~----~~-~~~~~-~a~~a~~~g~~~~~s~~~~~--------------~------~e~ 56 (308)
.+|.+.+++++|++|||+...-. .| +-... +++.| +.|++++++++... + ++.
T Consensus 9 ~~ig~~~l~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA-~gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~~ 87 (338)
T 1z41_A 9 ITIKDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRA-IGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAK 87 (338)
T ss_dssp EEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHH-HTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHH
T ss_pred eeECCEEEcCccEECCcCCCcCCCCCCCCCHHHHHHHHHHH-cCCCCEEEeCCeeccccccCCCCCcccCCHHHHHHHHH
Confidence 57888999999999999876321 11 11223 44444 57899999876311 1 122
Q ss_pred Hhc---cCCCCceEEeeec----------------------CCc------------hHHHHHHHHHHHcCCcEEEEecCC
Q 021739 57 VSS---TGPGIRFFQLYVT----------------------KHR------------NVDAQLVKRAERAGFKAIALTVDT 99 (308)
Q Consensus 57 i~~---~~~~~~~~Ql~~~----------------------~d~------------~~~~~~~~~~~~~g~~~i~i~~~~ 99 (308)
+.. ....+.++||+.. ..+ +.+.+..++++++|+++|+||..|
T Consensus 88 ~~~~vh~~g~~i~~QL~h~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~ 167 (338)
T 1z41_A 88 LTEQVKEQGSKIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAH 167 (338)
T ss_dssp HHHHHHHTTCEEEEEEECCGGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECT
T ss_pred HHHHHHhcCCEEEEEecCCCcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEecccc
Confidence 221 1224789999842 122 345666778888999999999987
Q ss_pred CCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhcCCCEEEEecC-----
Q 021739 100 PRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL----- 174 (308)
Q Consensus 100 p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~~~Pv~vK~~~----- 174 (308)
... .+.|.-| ..+.++ + .. | ++ +. .++.+..+.++++|+.++.||.+|+..
T Consensus 168 gyL-------l~qFlsp-~~n~R~-d--------~y-G---Gs-le--nr~r~~~eiv~avr~~v~~pv~vris~~~~~~ 223 (338)
T 1z41_A 168 GYL-------IHEFLSP-LSNHRT-D--------EY-G---GS-PE--NRYRFLREIIDEVKQVWDGPLFVRVSASDYTD 223 (338)
T ss_dssp TSH-------HHHHHCT-TTCCCC-S--------TT-S---SS-HH--HHHHHHHHHHHHHHHHCCSCEEEEEECCCCST
T ss_pred chH-------HHHccCC-CcCCcC-c--------cc-C---cc-hh--hhHHHHHHHHHHHHHHcCCcEEEEecCcccCC
Confidence 321 0111111 011000 0 01 1 11 11 245667899999999999999999864
Q ss_pred ---CH----HHHHHHHHcCCcEEEEeccccc-C-CCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcC-C
Q 021739 175 ---TA----EDASLAIQYGAAGIIVSNHGAR-Q-LDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALG-A 243 (308)
Q Consensus 175 ---~~----e~a~~~~~~G~d~i~v~~~gg~-~-~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~G-A 243 (308)
+. +.++.+.++|+|+|.+++.... + ....+ ..+..+.++++.+ ++|||++|||++++++.++++.| |
T Consensus 224 ~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~s~~~a~~~l~~G~a 301 (338)
T 1z41_A 224 KGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA--DMATGAVGMITDGSMAEEILQNGRA 301 (338)
T ss_dssp TSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--CCEEEECSSCCSHHHHHHHHHTTSC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC--CCCEEEECCCCCHHHHHHHHHcCCc
Confidence 23 4478889999999999875321 1 11122 2456777887777 79999999999999999999998 9
Q ss_pred CEEEEchHHHHh
Q 021739 244 SGVFVGRPVPFS 255 (308)
Q Consensus 244 d~V~ig~~~l~~ 255 (308)
|+|++||+++..
T Consensus 302 D~V~iGR~~i~n 313 (338)
T 1z41_A 302 DLIFIGRELLRD 313 (338)
T ss_dssp SEEEECHHHHHC
T ss_pred eEEeecHHHHhC
Confidence 999999999874
No 41
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.75 E-value=8.4e-17 Score=149.35 Aligned_cols=184 Identities=21% Similarity=0.225 Sum_probs=134.7
Q ss_pred ecCcccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCCCHHHH-------hccCCCCceEEeeecCCchH
Q 021739 5 VLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEV-------SSTGPGIRFFQLYVTKHRNV 77 (308)
Q Consensus 5 ~~g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~~e~i-------~~~~~~~~~~Ql~~~~d~~~ 77 (308)
+|| ++.||+.+||++. ++ ..++.++.+.|....+... ..+.+++ .+..+.+..+|++. .+++
T Consensus 8 ~l~--~~~Pii~apM~g~--s~----~~la~av~~aG~lG~i~~~-~~~~~~~~~~i~~i~~~~~~p~gvnl~~-~~~~- 76 (332)
T 2z6i_A 8 LLK--IDYPIFQGGMAWV--AD----GDLAGAVSKAGGLGIIGGG-NAPKEVVKANIDKIKSLTDKPFGVNIML-LSPF- 76 (332)
T ss_dssp HHT--CSSSEEECCCTTT--CC----HHHHHHHHHHTSBEEEECT-TCCHHHHHHHHHHHHHHCCSCEEEEECT-TSTT-
T ss_pred HhC--CCCCEEeCCCCCC--Cc----HHHHHHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhcCCCEEEEecC-CCCC-
Confidence 445 6899999999964 53 4788999999964334322 2233332 22233477889883 3333
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHH
Q 021739 78 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 157 (308)
Q Consensus 78 ~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 157 (308)
..+.++.+.+.|++++.++.++|. +.+
T Consensus 77 ~~~~~~~a~~~g~d~V~~~~g~p~-----------------------------------------------------~~i 103 (332)
T 2z6i_A 77 VEDIVDLVIEEGVKVVTTGAGNPS-----------------------------------------------------KYM 103 (332)
T ss_dssp HHHHHHHHHHTTCSEEEECSSCGG-----------------------------------------------------GTH
T ss_pred HHHHHHHHHHCCCCEEEECCCChH-----------------------------------------------------HHH
Confidence 456677888899999988865541 134
Q ss_pred HHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecc--cccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHH
Q 021739 158 KWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNH--GARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDV 235 (308)
Q Consensus 158 ~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~--gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~ 235 (308)
+++++ .++||++|. .+.++++.+.+.|+|+|.+++. ||+. +..+++..+.++++.+ ++|||++|||.+++|+
T Consensus 104 ~~l~~-~g~~v~~~v-~~~~~a~~~~~~GaD~i~v~g~~~GG~~--g~~~~~~ll~~i~~~~--~iPViaaGGI~~~~~~ 177 (332)
T 2z6i_A 104 ERFHE-AGIIVIPVV-PSVALAKRMEKIGADAVIAEGMEAGGHI--GKLTTMTLVRQVATAI--SIPVIAAGGIADGEGA 177 (332)
T ss_dssp HHHHH-TTCEEEEEE-SSHHHHHHHHHTTCSCEEEECTTSSEEC--CSSCHHHHHHHHHHHC--SSCEEEESSCCSHHHH
T ss_pred HHHHH-cCCeEEEEe-CCHHHHHHHHHcCCCEEEEECCCCCCCC--CCccHHHHHHHHHHhc--CCCEEEECCCCCHHHH
Confidence 55555 478999885 6788999999999999999764 3321 1346788888888776 7999999999999999
Q ss_pred HHHHHcCCCEEEEchHHHHhccc
Q 021739 236 FKALALGASGVFVGRPVPFSLAV 258 (308)
Q Consensus 236 ~k~l~~GAd~V~ig~~~l~~~~~ 258 (308)
.+++++|||+|++||+|+....+
T Consensus 178 ~~al~~GAdgV~vGs~~l~~~e~ 200 (332)
T 2z6i_A 178 AAGFMLGAEAVQVGTRFVVAKES 200 (332)
T ss_dssp HHHHHTTCSEEEECHHHHTBTTC
T ss_pred HHHHHcCCCEEEecHHHhcCccc
Confidence 99999999999999999875433
No 42
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.75 E-value=2e-16 Score=146.59 Aligned_cols=194 Identities=19% Similarity=0.226 Sum_probs=138.4
Q ss_pred eecCcccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCCCHHHH-------hccCCCCceEEeeecC---
Q 021739 4 TVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEV-------SSTGPGIRFFQLYVTK--- 73 (308)
Q Consensus 4 ~~~g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~~e~i-------~~~~~~~~~~Ql~~~~--- 73 (308)
++|+ ++.||+.+||++. + +..++.++.+.|....+......+.+++ .+....+..++++...
T Consensus 10 ~~l~--~~~Pii~apM~gv--s----~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~ 81 (328)
T 2gjl_A 10 ETFG--VEHPIMQGGMQWV--G----RAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQK 81 (328)
T ss_dssp HHHT--CSSSEEECCCTTT--C----SHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSS
T ss_pred HHhC--CCCCEEECCCCCC--C----cHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecccccc
Confidence 3454 5789999999764 6 4489999999996555543322223332 2223346778888541
Q ss_pred CchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccC
Q 021739 74 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 153 (308)
Q Consensus 74 d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 153 (308)
+++ ..+.++.+.+.|++.+.++.++|
T Consensus 82 ~~~-~~~~~~~~~~~g~d~V~~~~g~p----------------------------------------------------- 107 (328)
T 2gjl_A 82 PVP-YAEYRAAIIEAGIRVVETAGNDP----------------------------------------------------- 107 (328)
T ss_dssp CCC-HHHHHHHHHHTTCCEEEEEESCC-----------------------------------------------------
T ss_pred Ccc-HHHHHHHHHhcCCCEEEEcCCCc-----------------------------------------------------
Confidence 222 45677778889999998876543
Q ss_pred HHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecc--cccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCC
Q 021739 154 WKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNH--GARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR 231 (308)
Q Consensus 154 ~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~--gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~ 231 (308)
.+.++++++. ++|++.+ +.+.++++.+.+.|+|+|.+.+. ||+......+++..+.++++.+ ++||+++|||++
T Consensus 108 ~~~~~~l~~~-gi~vi~~-v~t~~~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~--~iPviaaGGI~~ 183 (328)
T 2gjl_A 108 GEHIAEFRRH-GVKVIHK-CTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRL--RVPIIASGGFAD 183 (328)
T ss_dssp HHHHHHHHHT-TCEEEEE-ESSHHHHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTC--CSCEEEESSCCS
T ss_pred HHHHHHHHHc-CCCEEee-CCCHHHHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhc--CCCEEEECCCCC
Confidence 1345666664 7888865 57889999999999999999763 3332111346788888887655 799999999999
Q ss_pred HHHHHHHHHcCCCEEEEchHHHHhcccCCHHH
Q 021739 232 GTDVFKALALGASGVFVGRPVPFSLAVDGEAG 263 (308)
Q Consensus 232 ~~d~~k~l~~GAd~V~ig~~~l~~~~~~G~~~ 263 (308)
++|+.+++++|||+|++||+|+....+.+.+.
T Consensus 184 ~~~v~~al~~GAdgV~vGs~~~~~~e~~~~~~ 215 (328)
T 2gjl_A 184 GRGLVAALALGADAINMGTRFLATRECPIHPA 215 (328)
T ss_dssp HHHHHHHHHHTCSEEEESHHHHTSSSSCSCHH
T ss_pred HHHHHHHHHcCCCEEEECHHHHcCccccccHH
Confidence 99999999999999999999998654444433
No 43
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.75 E-value=2.6e-17 Score=160.31 Aligned_cols=140 Identities=23% Similarity=0.310 Sum_probs=115.3
Q ss_pred HHHHHHHHHhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEecccccC------CCCCcchHHHHHHHHHHcc-CCCeEEE
Q 021739 154 WKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ------LDYVPATVMALEEVVQAAK-GRVPVFL 225 (308)
Q Consensus 154 ~~~i~~ir~~~-~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~------~~~~~~~~~~l~~i~~~~~-~~ipvia 225 (308)
++.++++++.+ ++||+++.+.+.+.++.+.++|+|+|.++++.|.. ...+.+.+..+.++.+.++ .++|||+
T Consensus 260 ~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa 339 (496)
T 4fxs_A 260 LQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIA 339 (496)
T ss_dssp HHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEE
T ss_pred HHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEE
Confidence 57899999988 89999999999999999999999999997543321 1234678888888887653 2699999
Q ss_pred ecCCCCHHHHHHHHHcCCCEEEEchHHHHhcccC--------------------------------------------CH
Q 021739 226 DGGVRRGTDVFKALALGASGVFVGRPVPFSLAVD--------------------------------------------GE 261 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~~~~~--------------------------------------------G~ 261 (308)
+|||+++.|+.+++++|||+||+|++|+....+. |.
T Consensus 340 ~GGI~~~~di~kala~GAd~V~iGs~f~~t~Espg~~~~~~g~~~k~~~gm~s~~a~~~~~~~r~~~~~~~~~~~~~eg~ 419 (496)
T 4fxs_A 340 DGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGI 419 (496)
T ss_dssp ESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEESSSCEEEEEECTTSHHHHHSSSCCSTTTC---CCCCCCSBC
T ss_pred eCCCCCHHHHHHHHHcCCCeEEecHHHhcCCCCCcceeeeCCeEeeeecccchHHHHhccccccccccccccccccCCcc
Confidence 9999999999999999999999999986421110 10
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHcCCCCHhhhccc
Q 021739 262 -------AGVRKVLQMLRDEFELTMALSGCRSLKEITRN 293 (308)
Q Consensus 262 -------~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~ 293 (308)
..+.+++..+..+|+..|.++|+.+|.||+++
T Consensus 420 ~~~v~~~g~~~~~~~~~~~~l~~~~~~~g~~~i~~l~~~ 458 (496)
T 4fxs_A 420 EGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTK 458 (496)
T ss_dssp EEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHhcCcCcHHHHHhC
Confidence 13779999999999999999999999999865
No 44
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.73 E-value=7.8e-16 Score=142.49 Aligned_cols=184 Identities=21% Similarity=0.263 Sum_probs=133.8
Q ss_pred ccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCCCHHHHh-------ccCCCCceEEeeecCCchHHHHH
Q 021739 9 NISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVS-------STGPGIRFFQLYVTKHRNVDAQL 81 (308)
Q Consensus 9 ~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~~e~i~-------~~~~~~~~~Ql~~~~d~~~~~~~ 81 (308)
.++.||+.+||++. ++ ..++.++.+.|....+... ..+.+++. +....+..++++. .+++ ..+.
T Consensus 24 ~~~~Pii~apM~gv--s~----~~la~av~~aGglG~i~~~-~~~~~~l~~~i~~i~~~~~~p~gVnl~~-~~~~-~~~~ 94 (326)
T 3bo9_A 24 EIEHPILMGGMAWA--GT----PTLAAAVSEAGGLGIIGSG-AMKPDDLRKAISELRQKTDKPFGVNIIL-VSPW-ADDL 94 (326)
T ss_dssp TCSSSEEECCCTTT--SC----HHHHHHHHHTTSBEEEECT-TCCHHHHHHHHHHHHTTCSSCEEEEEET-TSTT-HHHH
T ss_pred CCCCCEEECCCCCC--CC----HHHHHHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhcCCCEEEEEec-cCCC-HHHH
Confidence 46899999999965 64 4899999999965555432 23443322 2222367788773 3333 3556
Q ss_pred HHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHH
Q 021739 82 VKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQ 161 (308)
Q Consensus 82 ~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir 161 (308)
++.+.+.|++.+.++.++|. +.+++++
T Consensus 95 ~~~~~~~g~d~V~l~~g~p~-----------------------------------------------------~~~~~l~ 121 (326)
T 3bo9_A 95 VKVCIEEKVPVVTFGAGNPT-----------------------------------------------------KYIRELK 121 (326)
T ss_dssp HHHHHHTTCSEEEEESSCCH-----------------------------------------------------HHHHHHH
T ss_pred HHHHHHCCCCEEEECCCCcH-----------------------------------------------------HHHHHHH
Confidence 67777899999988765541 2345555
Q ss_pred HhcCCCEEEEecCCHHHHHHHHHcCCcEEEEec--ccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHH
Q 021739 162 TITSLPILVKGVLTAEDASLAIQYGAAGIIVSN--HGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKAL 239 (308)
Q Consensus 162 ~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~--~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l 239 (308)
+ .++|++++ +.+.++++.+.++|+|+|.+.+ .||+. +..+++..+.++++.+ ++|||++|||++++|+.+++
T Consensus 122 ~-~g~~v~~~-v~s~~~a~~a~~~GaD~i~v~g~~~GG~~--G~~~~~~ll~~i~~~~--~iPviaaGGI~~~~dv~~al 195 (326)
T 3bo9_A 122 E-NGTKVIPV-VASDSLARMVERAGADAVIAEGMESGGHI--GEVTTFVLVNKVSRSV--NIPVIAAGGIADGRGMAAAF 195 (326)
T ss_dssp H-TTCEEEEE-ESSHHHHHHHHHTTCSCEEEECTTSSEEC--CSSCHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHH
T ss_pred H-cCCcEEEE-cCCHHHHHHHHHcCCCEEEEECCCCCccC--CCccHHHHHHHHHHHc--CCCEEEECCCCCHHHHHHHH
Confidence 4 47788764 4788999999999999999987 34432 1346788888888776 79999999999999999999
Q ss_pred HcCCCEEEEchHHHHhcccCC
Q 021739 240 ALGASGVFVGRPVPFSLAVDG 260 (308)
Q Consensus 240 ~~GAd~V~ig~~~l~~~~~~G 260 (308)
++||++|++||+|+....+.+
T Consensus 196 ~~GA~gV~vGs~~~~~~e~~~ 216 (326)
T 3bo9_A 196 ALGAEAVQMGTRFVASVESDV 216 (326)
T ss_dssp HHTCSEEEESHHHHTBSSCCS
T ss_pred HhCCCEEEechHHHcCccccc
Confidence 999999999999997654433
No 45
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.69 E-value=3.6e-15 Score=140.24 Aligned_cols=99 Identities=25% Similarity=0.318 Sum_probs=78.3
Q ss_pred HHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecc--cc---cCCCCC------cchHHHHHHHHHHccCCCe
Q 021739 154 WKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNH--GA---RQLDYV------PATVMALEEVVQAAKGRVP 222 (308)
Q Consensus 154 ~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~--gg---~~~~~~------~~~~~~l~~i~~~~~~~ip 222 (308)
.+.++++++ .++|++++ +.+.++++.+.++|+|+|.+++. || +..... ...+..+.++++.+ ++|
T Consensus 135 ~~~i~~~~~-~g~~v~~~-v~t~~~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~--~iP 210 (369)
T 3bw2_A 135 REVIARLRR-AGTLTLVT-ATTPEEARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAV--DIP 210 (369)
T ss_dssp HHHHHHHHH-TTCEEEEE-ESSHHHHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHC--SSC
T ss_pred HHHHHHHHH-CCCeEEEE-CCCHHHHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhc--Cce
Confidence 567788876 47888765 46889999999999999999663 22 211111 23477888887765 799
Q ss_pred EEEecCCCCHHHHHHHHHcCCCEEEEchHHHHhc
Q 021739 223 VFLDGGVRRGTDVFKALALGASGVFVGRPVPFSL 256 (308)
Q Consensus 223 via~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~~ 256 (308)
||+.|||.+++++.+++++|||+|++||+|+...
T Consensus 211 ViaaGGI~~~~~~~~~l~~GAd~V~vGs~~~~~~ 244 (369)
T 3bw2_A 211 VVAAGGIMRGGQIAAVLAAGADAAQLGTAFLATD 244 (369)
T ss_dssp EEEESSCCSHHHHHHHHHTTCSEEEESHHHHTST
T ss_pred EEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCc
Confidence 9999999999999999999999999999998753
No 46
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=99.68 E-value=7.3e-15 Score=136.60 Aligned_cols=227 Identities=17% Similarity=0.129 Sum_probs=144.4
Q ss_pred eeecCcccCCceEeccccCcccC----CC-HHHHHHHHHHHHcCCceeecCCCCC--------------C------HHHH
Q 021739 3 TTVLGFNISMPIMIAPTAFQKMA----HP-EGECATARAASAAGTIMTLSSWATS--------------S------VEEV 57 (308)
Q Consensus 3 t~~~g~~~~~Pi~iapm~~~~~~----~~-~~~~~~a~~a~~~g~~~~~s~~~~~--------------~------~e~i 57 (308)
.+|.+.++++.|++|||+.+... .| +....+-+.-++-|+++++++.... + ++.+
T Consensus 9 ~~ig~~~l~NRiv~apm~~~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~ 88 (340)
T 3gr7_A 9 YTIRGLTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLREL 88 (340)
T ss_dssp EEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSEECSSTTHHHHHHHH
T ss_pred EeECCEEEcCceEECCcCCCcccCCCCCCCHHHHHHHHHHhcCCceEEEEcceEecccccCCCCCcccCCHHHHHHHHHH
Confidence 56778999999999999754221 11 1223444444456788888754211 1 1122
Q ss_pred hc---cCCCCceEEeeecC---------------------------C-------chHHHHHHHHHHHcCCcEEEEecCCC
Q 021739 58 SS---TGPGIRFFQLYVTK---------------------------H-------RNVDAQLVKRAERAGFKAIALTVDTP 100 (308)
Q Consensus 58 ~~---~~~~~~~~Ql~~~~---------------------------d-------~~~~~~~~~~~~~~g~~~i~i~~~~p 100 (308)
.. ......++||.... + .+.+.+..++++++||++|+||..|=
T Consensus 89 ~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~G 168 (340)
T 3gr7_A 89 VGLVKEHGAAIGIQLAHAGRKSQVPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHG 168 (340)
T ss_dssp HHHHHHTTCEEEEEEECCGGGCCSSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTT
T ss_pred HHHHHhCCCeEEEEeccCCCccCCCCCccCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccc
Confidence 21 12236788986421 0 12334555667789999999998851
Q ss_pred CCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhcCCCEEEEecCC-----
Q 021739 101 RLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLT----- 175 (308)
Q Consensus 101 ~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~~~Pv~vK~~~~----- 175 (308)
+- -+.|.-| ..+.|+ + .. | +++. ..+.+..|.++++|+.++.||.+|+...
T Consensus 169 ---yL----l~qFlsp-~~N~R~-D--------~y-G---Gsle---nR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~ 224 (340)
T 3gr7_A 169 ---YL----INEFLSP-LSNRRQ-D--------EY-G---GSPE---NRYRFLGEVIDAVREVWDGPLFVRISASDYHPD 224 (340)
T ss_dssp ---CH----HHHHHCT-TTCCCC-S--------TT-S---SSHH---HHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTT
T ss_pred ---hH----HHHcCCC-ccCcCC-C--------cc-c---CCHH---HHHHHHHHHHHHHHHhcCCceEEEeccccccCC
Confidence 10 0111111 011000 0 01 1 1111 2456678999999999999999998742
Q ss_pred -------HHHHHHHHHcCCcEEEEecccccC--CCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcC-CC
Q 021739 176 -------AEDASLAIQYGAAGIIVSNHGARQ--LDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALG-AS 244 (308)
Q Consensus 176 -------~e~a~~~~~~G~d~i~v~~~gg~~--~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~G-Ad 244 (308)
.+.++.+.++|+|+|.+++..... ....+ ..+..+.++++.+ ++|||++|||++++++.++++.| ||
T Consensus 225 g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~--~iPVi~~GgI~s~e~a~~~L~~G~aD 302 (340)
T 3gr7_A 225 GLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA--DIPTGAVGLITSGWQAEEILQNGRAD 302 (340)
T ss_dssp SCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT--TCCEEEESSCCCHHHHHHHHHTTSCS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc--CCcEEeeCCCCCHHHHHHHHHCCCee
Confidence 355889999999999998632111 11122 2466777888776 79999999999999999999999 99
Q ss_pred EEEEchHHHHh
Q 021739 245 GVFVGRPVPFS 255 (308)
Q Consensus 245 ~V~ig~~~l~~ 255 (308)
+|++||+++..
T Consensus 303 ~V~iGR~~lan 313 (340)
T 3gr7_A 303 LVFLGRELLRN 313 (340)
T ss_dssp EEEECHHHHHC
T ss_pred EEEecHHHHhC
Confidence 99999999864
No 47
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.67 E-value=8.4e-16 Score=149.75 Aligned_cols=145 Identities=17% Similarity=0.224 Sum_probs=117.8
Q ss_pred cCHHHHHHHHHhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEecccccC------CCCCcchHHHHHHHHHHcc-CCCeE
Q 021739 152 LNWKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ------LDYVPATVMALEEVVQAAK-GRVPV 223 (308)
Q Consensus 152 ~~~~~i~~ir~~~-~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~------~~~~~~~~~~l~~i~~~~~-~~ipv 223 (308)
..++.++++++.+ ++|++.+.+.+.+.+..+.++|+|+|.+++.+|.. ...+.++...+.++.+... .++||
T Consensus 260 ~~~~~i~~l~~~~p~~pvi~G~v~t~~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipv 339 (491)
T 1zfj_A 260 GVLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTI 339 (491)
T ss_dssp HHHHHHHHHHHHCSSSCEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEE
T ss_pred hHHHHHHHHHHHCCCCcEeCCCccCHHHHHHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCE
Confidence 3578899999998 89999999999999999999999999997654431 1234567888877766432 37999
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEEchHHHHh--------------------cc-------------------------c
Q 021739 224 FLDGGVRRGTDVFKALALGASGVFVGRPVPFS--------------------LA-------------------------V 258 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~--------------------~~-------------------------~ 258 (308)
|++|||+++.|+.|++++||++|++|++|+.. ++ .
T Consensus 340 ia~GGi~~~~di~kal~~GA~~v~vG~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~~~~~~~~~g~~~~~~~~~~ 419 (491)
T 1zfj_A 340 IADGGIKYSGDIVKALAAGGNAVMLGSMFAGTDEAPGETEIYQGRKYKTYRGMGSIAAMKKGSSDRYFQGSVNEANKLVP 419 (491)
T ss_dssp EEESCCCSHHHHHHHHHTTCSEEEESTTTTTBSSCCCCEEEETTEEEEEEECTTSHHHHCC--------------CCCCC
T ss_pred EeeCCCCCHHHHHHHHHcCCcceeeCHHhhCCCcCcceEEEECCEEEEEEecccCHHHHhccccccccccccccccccCc
Confidence 99999999999999999999999999999731 10 1
Q ss_pred CCHH-------HHHHHHHHHHHHHHHHHHHcCCCCHhhhccccee
Q 021739 259 DGEA-------GVRKVLQMLRDEFELTMALSGCRSLKEITRNHIV 296 (308)
Q Consensus 259 ~G~~-------~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~~~~ 296 (308)
+|.+ .+.++++.+..+|+..|.++|+.++.+|+.....
T Consensus 420 ~g~~~~~~~~~~~~~~~~~l~~~l~~~~~~~G~~~~~~l~~~~~~ 464 (491)
T 1zfj_A 420 EGIEGRVAYKGAASDIVFQMLGGIRSGMGYVGAGDIQELHENAQF 464 (491)
T ss_dssp SBCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHCCE
T ss_pred CcceEecCcCCCHHHHHHHHHHHHHHHhhhcCcccHHHHHhcCcE
Confidence 1211 1889999999999999999999999999876444
No 48
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=99.67 E-value=2.9e-15 Score=141.14 Aligned_cols=223 Identities=16% Similarity=0.107 Sum_probs=146.5
Q ss_pred eeecCcccCCceEeccccCcccCCCH---HHHHHHHHHHHcCCceeecCCCCC--------------CHH------HHhc
Q 021739 3 TTVLGFNISMPIMIAPTAFQKMAHPE---GECATARAASAAGTIMTLSSWATS--------------SVE------EVSS 59 (308)
Q Consensus 3 t~~~g~~~~~Pi~iapm~~~~~~~~~---~~~~~a~~a~~~g~~~~~s~~~~~--------------~~e------~i~~ 59 (308)
.+|.+.+++++|++|||+.... ++ .+..++--+++++++++++++... +.+ .+..
T Consensus 15 ~~ig~~~l~NRiv~aPm~~~~a--~~g~pt~~~~~~y~~rA~~GLiitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~~ 92 (377)
T 2r14_A 15 LQLGSLSLPNRVIMAPLTRSRT--PDSVPGRLQQIYYGQRASAGLIISEATNISPTARGYVYTPGIWTDAQEAGWKGVVE 92 (377)
T ss_dssp EEETTEEESCSEEECCCCCCCC--TTSCCCHHHHHHHHHTTTSSCEEEEEEESSGGGCCBTTCCBSSSHHHHHHHHHHHH
T ss_pred eeECCEEecCCeEECCCcCCcC--CCCCCCHHHHHHHHHHhcCCEEEEcceeeccccccCCCCcccCCHHHHHHHHHHHH
Confidence 5678889999999999986521 21 256677778888889988876321 122 2221
Q ss_pred ---cCCCCceEEeeec------------------------------------------CCc------------hHHHHHH
Q 021739 60 ---TGPGIRFFQLYVT------------------------------------------KHR------------NVDAQLV 82 (308)
Q Consensus 60 ---~~~~~~~~Ql~~~------------------------------------------~d~------------~~~~~~~ 82 (308)
....+.++||+.. ..+ +.+.+..
T Consensus 93 avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~aA 172 (377)
T 2r14_A 93 AVHAKGGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGIVEDYRQAA 172 (377)
T ss_dssp HHHHTTCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHHHH
T ss_pred HHhhcCCeEEEEccCCccccccccccCCCcccCCCcccccccccccccccccccccCCCCCccCCHHHHHHHHHHHHHHH
Confidence 1224789999741 122 4556677
Q ss_pred HHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHH
Q 021739 83 KRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQT 162 (308)
Q Consensus 83 ~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~ 162 (308)
++++++|+++|.||..|-.. .+.|.-| ..+.| -+ .. | +++ . .++.+..|+++++|+
T Consensus 173 ~~a~~aGfDgVEIh~a~GYL-------l~QFlsp-~~N~R-~D--------~y-G---Gsl-e--nR~r~~~eiv~aVr~ 228 (377)
T 2r14_A 173 QRAKRAGFDMVEVHAANACL-------PNQFLAT-GTNRR-TD--------QY-G---GSI-E--NRARFPLEVVDAVAE 228 (377)
T ss_dssp HHHHHHTCSEEEEEECTTCH-------HHHHHST-TTCCC-CS--------TT-S---SSH-H--HHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEcCcccch-------HHhccCC-ccccC-CC--------cc-C---cch-h--hchHHHHHHHHHHHH
Confidence 78888999999999987211 0111111 00100 00 01 1 111 1 245667899999999
Q ss_pred hcC-CCEEEEecCC-----------H----HHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEe
Q 021739 163 ITS-LPILVKGVLT-----------A----EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLD 226 (308)
Q Consensus 163 ~~~-~Pv~vK~~~~-----------~----e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~ 226 (308)
.++ -||.+|+... . +.++.+.++|+|+|.+++....+.... ..+..+.++++.+ ++|||++
T Consensus 229 avg~~~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~-~~~~~~~~ik~~~--~iPvi~~ 305 (377)
T 2r14_A 229 VFGPERVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDIT-YPEGFREQMRQRF--KGGLIYC 305 (377)
T ss_dssp HHCGGGEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------C-CCTTHHHHHHHHC--CSEEEEE
T ss_pred HcCCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCc-chHHHHHHHHHHC--CCCEEEE
Confidence 884 3999998631 2 337889999999999987431111111 1345667777776 7999999
Q ss_pred cCCCCHHHHHHHHHcC-CCEEEEchHHHHh
Q 021739 227 GGVRRGTDVFKALALG-ASGVFVGRPVPFS 255 (308)
Q Consensus 227 GGI~~~~d~~k~l~~G-Ad~V~ig~~~l~~ 255 (308)
||| +++++.++++.| ||+|++||+++..
T Consensus 306 Ggi-~~~~a~~~l~~g~aD~V~igR~~l~~ 334 (377)
T 2r14_A 306 GNY-DAGRAQARLDDNTADAVAFGRPFIAN 334 (377)
T ss_dssp SSC-CHHHHHHHHHTTSCSEEEESHHHHHC
T ss_pred CCC-CHHHHHHHHHCCCceEEeecHHHHhC
Confidence 999 699999999998 9999999999964
No 49
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=99.67 E-value=9.7e-15 Score=137.00 Aligned_cols=224 Identities=17% Similarity=0.085 Sum_probs=149.3
Q ss_pred eeecCcccCCceEeccccCcccCCCH---HHHHHHHHHHHcCCceeecCCCCC--------------CHH------HHhc
Q 021739 3 TTVLGFNISMPIMIAPTAFQKMAHPE---GECATARAASAAGTIMTLSSWATS--------------SVE------EVSS 59 (308)
Q Consensus 3 t~~~g~~~~~Pi~iapm~~~~~~~~~---~~~~~a~~a~~~g~~~~~s~~~~~--------------~~e------~i~~ 59 (308)
.+|.+.+++++|++|||+......++ -+..++--++++|++++++++... +.+ .+..
T Consensus 9 ~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rAg~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~~ 88 (364)
T 1vyr_A 9 LKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIISEATQISAQAKGYAGAPGLHSPEQIAAWKKITA 88 (364)
T ss_dssp EEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEEEEEESSSTTCCSTTCCBSSSHHHHHHHHHHHH
T ss_pred eeECCEEECCccEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEEccccccccccCCCCCcccCCHHHHHHHHHHHH
Confidence 56888999999999999876321122 266777778888999999876211 112 2221
Q ss_pred ---cCCCCceEEeeec-----------------------------------------CCc------------hHHHHHHH
Q 021739 60 ---TGPGIRFFQLYVT-----------------------------------------KHR------------NVDAQLVK 83 (308)
Q Consensus 60 ---~~~~~~~~Ql~~~-----------------------------------------~d~------------~~~~~~~~ 83 (308)
....+.++||+.. ..+ +.+.+..+
T Consensus 89 ~vh~~g~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~aA~ 168 (364)
T 1vyr_A 89 GVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIVNDFRQAVA 168 (364)
T ss_dssp HHHHTTCCEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHHHHH
T ss_pred HHHhcCCeEEEEeccCCcccCcccccCCCccccCCCcccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHH
Confidence 1224789999731 122 35566777
Q ss_pred HHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHh
Q 021739 84 RAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTI 163 (308)
Q Consensus 84 ~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~ 163 (308)
+++++|+++|.||..|-.. .+.|.-| ..+.| -+ .. .+++ . .++.+..++++++|+.
T Consensus 169 ~a~~aGfDgVeih~a~GyL-------l~qFlsp-~~N~R-~D--------~y----GGsl-e--nr~r~~~eiv~avr~~ 224 (364)
T 1vyr_A 169 NAREAGFDLVELHSAHGYL-------LHQFLSP-SSNQR-TD--------QY----GGSV-E--NRARLVLEVVDAVCNE 224 (364)
T ss_dssp HHHHTTCSEEEEEECTTSH-------HHHHHCT-TTCCC-CS--------TT----SSSH-H--HHTHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEcCccchH-------HHhccCC-ccccc-CC--------cC----Ccch-h--cChhhHHHHHHHHHHh
Confidence 7889999999999987321 0111111 11100 00 01 1111 1 3566778999999998
Q ss_pred cC-CCEEEEecCC------------HH----HHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEe
Q 021739 164 TS-LPILVKGVLT------------AE----DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLD 226 (308)
Q Consensus 164 ~~-~Pv~vK~~~~------------~e----~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~ 226 (308)
++ -||.+|+... .+ .++.+.++|+|+|.+++....+.. ...+..+.++++.+ ++|||++
T Consensus 225 vg~~~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~--~~~~~~~~~v~~~~--~iPvi~~ 300 (364)
T 1vyr_A 225 WSADRIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGK--PYSEAFRQKVRERF--HGVIIGA 300 (364)
T ss_dssp SCGGGEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCC--CCCHHHHHHHHHHC--CSEEEEE
T ss_pred cCCCcEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCC--cccHHHHHHHHHHC--CCCEEEE
Confidence 83 3999998742 22 378899999999999874321111 11356677787776 7999999
Q ss_pred cCCCCHHHHHHHHHcC-CCEEEEchHHHHh
Q 021739 227 GGVRRGTDVFKALALG-ASGVFVGRPVPFS 255 (308)
Q Consensus 227 GGI~~~~d~~k~l~~G-Ad~V~ig~~~l~~ 255 (308)
||| +++++.++++.| ||+|++||+++..
T Consensus 301 Ggi-t~~~a~~~l~~g~aD~V~~gR~~l~~ 329 (364)
T 1vyr_A 301 GAY-TAEKAEDLIGKGLIDAVAFGRDYIAN 329 (364)
T ss_dssp SSC-CHHHHHHHHHTTSCSEEEESHHHHHC
T ss_pred CCc-CHHHHHHHHHCCCccEEEECHHHHhC
Confidence 999 899999999998 9999999999863
No 50
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=99.67 E-value=3.2e-15 Score=140.31 Aligned_cols=224 Identities=17% Similarity=0.088 Sum_probs=148.4
Q ss_pred eeecCcccCCceEeccccCcccCCCH---HHHHHHHHHHHcCCceeecCCCCC--------------CHH------HHhc
Q 021739 3 TTVLGFNISMPIMIAPTAFQKMAHPE---GECATARAASAAGTIMTLSSWATS--------------SVE------EVSS 59 (308)
Q Consensus 3 t~~~g~~~~~Pi~iapm~~~~~~~~~---~~~~~a~~a~~~g~~~~~s~~~~~--------------~~e------~i~~ 59 (308)
.+|.+.+++++|++|||+......++ .+..++--+++++++++++++... +.+ .+..
T Consensus 9 ~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~~ 88 (365)
T 2gou_A 9 ITLGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRASAGLIVSEGTQISPTAKGYAWTPGIYTPEQIAGWRIVTE 88 (365)
T ss_dssp EEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTTSSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHHHHHHH
T ss_pred eeECCEEEcCceEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEECceeecccccCCCCCCccCCHHHHHHHHHHHH
Confidence 56888999999999999876321122 256677778888899998876321 112 2221
Q ss_pred ---cCCCCceEEeeec-----------------------------------------CCc------------hHHHHHHH
Q 021739 60 ---TGPGIRFFQLYVT-----------------------------------------KHR------------NVDAQLVK 83 (308)
Q Consensus 60 ---~~~~~~~~Ql~~~-----------------------------------------~d~------------~~~~~~~~ 83 (308)
....+.++||+.. ..+ +...+..+
T Consensus 89 ~vh~~g~~i~~QL~H~Gr~~~~~~~~g~~~~apS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~aA~ 168 (365)
T 2gou_A 89 AVHAKGCAIFAQLWHVGRVTHPDNIDGQQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTKADIAQVIADYRQAAL 168 (365)
T ss_dssp HHHHHSCEEEEEEECCTTSSCGGGTTTCCCEESSSCCCTTCEEEECCSSSSCEEEECCCCEECCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCeEEEEeecCCCcccccccCCCCccCCCCccccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHH
Confidence 1123678999741 122 45566777
Q ss_pred HHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHh
Q 021739 84 RAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTI 163 (308)
Q Consensus 84 ~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~ 163 (308)
++.++|+++|.||..|... .+.|.-| ..+.| -+ .. | ++ +. .++.+..++++++|+.
T Consensus 169 ~a~~aGfDgVeih~a~gYL-------l~qFlsp-~~N~R-~D--------~y-G---Gs-le--nr~r~~~eiv~avr~~ 224 (365)
T 2gou_A 169 NAMEAGFDGIELHAANGYL-------INQFIDS-EANNR-SD--------EY-G---GS-LE--NRLRFLDEVVAALVDA 224 (365)
T ss_dssp HHHHTTCSEEEEECCTTSH-------HHHHHSG-GGCCC-CS--------TT-S---SS-HH--HHTHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEecccchh-------HhhccCC-CccCc-Cc--------cc-C---cc-hh--hhHHHHHHHHHHHHHH
Confidence 7889999999999887321 0111111 00100 00 01 1 11 11 2456678999999998
Q ss_pred cCC-CEEEEecCC-----------HH----HHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEec
Q 021739 164 TSL-PILVKGVLT-----------AE----DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDG 227 (308)
Q Consensus 164 ~~~-Pv~vK~~~~-----------~e----~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~G 227 (308)
++- ||.+|+... .+ .++.+.++|+|+|.+++..... ... ..+..+.++++.+ ++|||++|
T Consensus 225 vg~~pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~-~~~-~~~~~~~~i~~~~--~iPvi~~G 300 (365)
T 2gou_A 225 IGAERVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDD-APD-TPVSFKRALREAY--QGVLIYAG 300 (365)
T ss_dssp HCGGGEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTB-CCC-CCHHHHHHHHHHC--CSEEEEES
T ss_pred cCCCcEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCC-CCC-ccHHHHHHHHHHC--CCcEEEeC
Confidence 742 999998742 22 3788999999999998742110 001 1246677787776 79999999
Q ss_pred CCCCHHHHHHHHHcC-CCEEEEchHHHHh
Q 021739 228 GVRRGTDVFKALALG-ASGVFVGRPVPFS 255 (308)
Q Consensus 228 GI~~~~d~~k~l~~G-Ad~V~ig~~~l~~ 255 (308)
|| +++++.++++.| ||+|++||+++..
T Consensus 301 gi-~~~~a~~~l~~g~aD~V~igR~~i~~ 328 (365)
T 2gou_A 301 RY-NAEKAEQAINDGLADMIGFGRPFIAN 328 (365)
T ss_dssp SC-CHHHHHHHHHTTSCSEEECCHHHHHC
T ss_pred CC-CHHHHHHHHHCCCcceehhcHHHHhC
Confidence 99 999999999998 9999999999973
No 51
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=99.64 E-value=7.1e-15 Score=139.49 Aligned_cols=224 Identities=14% Similarity=0.072 Sum_probs=142.4
Q ss_pred eeecCcccCCceEeccccCcccC--CCH-HHHH-HHHHHHHcCCceeecCCCCC--------------CHH------HHh
Q 021739 3 TTVLGFNISMPIMIAPTAFQKMA--HPE-GECA-TARAASAAGTIMTLSSWATS--------------SVE------EVS 58 (308)
Q Consensus 3 t~~~g~~~~~Pi~iapm~~~~~~--~~~-~~~~-~a~~a~~~g~~~~~s~~~~~--------------~~e------~i~ 58 (308)
.+|.+.+++++|++|||+..... .|. -... +++.|+ |++++++++... +.+ .+.
T Consensus 22 ~~ig~~~L~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~--G~GLIitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~ 99 (402)
T 2hsa_B 22 YKMGKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRAT--AGGFLITEGTMISPTSAGFPHVPGIFTKEQVREWKKIV 99 (402)
T ss_dssp EEETTEEESCSEEECCCCCCCSGGGCCCHHHHHHHHHHCC--TTCEEECCCEESSTTCCCSTTCCBCSSHHHHHHHHHHH
T ss_pred eeECCEEecCCeEECCCCCCcCCCCCCCHHHHHHHHHHhc--cCCEEEecceeeccccccCCCCcccCCHHHHHHHHHHH
Confidence 57888999999999999876211 111 1111 444443 588888876211 112 222
Q ss_pred c---cCCCCceEEeeec---------------------------------------CCc------------hHHHHHHHH
Q 021739 59 S---TGPGIRFFQLYVT---------------------------------------KHR------------NVDAQLVKR 84 (308)
Q Consensus 59 ~---~~~~~~~~Ql~~~---------------------------------------~d~------------~~~~~~~~~ 84 (308)
. ......++||+.. ..+ +.+.+..++
T Consensus 100 ~avh~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~v~~~~~~~~~~~~g~~~~~~~p~~mt~~eI~~ii~~f~~AA~~ 179 (402)
T 2hsa_B 100 DVVHAKGAVIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGIYPKPRAIGTYEISQVVEDYRRSALN 179 (402)
T ss_dssp HHHHHTTCEEEEEEECCTTSCCGGGCTTCCCCEESCSCCCCTTCEEECTTSCEEECCCCEECCGGGHHHHHHHHHHHHHH
T ss_pred HHHHhcCCeEEEEeccCCcccccccccCCCccccCCCcccccccccccccccccCCCCCccCCHHHHHHHHHHHHHHHHH
Confidence 1 1224778999831 122 466677788
Q ss_pred HHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhc
Q 021739 85 AERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTIT 164 (308)
Q Consensus 85 ~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~ 164 (308)
++++||++|+||..|-. - .+.|.-| ..+.| -+ .. | +++ +..+.+..|+++++|+.+
T Consensus 180 a~~AGfDgVEIh~ahGY---L----l~QFLsp-~~N~R-tD--------~y-G---Gsl---enR~rf~~Eiv~aVr~av 235 (402)
T 2hsa_B 180 AIEAGFDGIEIHGAHGY---L----IDQFLKD-GINDR-TD--------EY-G---GSL---ANRCKFITQVVQAVVSAI 235 (402)
T ss_dssp HHHTTCSEEEEECCTTS---H----HHHHHCT-TTCCC-CS--------TT-S---SSH---HHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEECCccch---H----HHhccCC-ccCcc-CC--------cc-C---cCh---hhhhHHHHHHHHHHHHHh
Confidence 88999999999987611 0 1111111 11100 00 01 1 111 124567789999999988
Q ss_pred C-CCEEEEecCC---------------HHHHHHHHHcC------CcEEEEecccccCCCCCc--------chHHHHHHHH
Q 021739 165 S-LPILVKGVLT---------------AEDASLAIQYG------AAGIIVSNHGARQLDYVP--------ATVMALEEVV 214 (308)
Q Consensus 165 ~-~Pv~vK~~~~---------------~e~a~~~~~~G------~d~i~v~~~gg~~~~~~~--------~~~~~l~~i~ 214 (308)
+ .||.+|+... .+.++.+.++| +|+|.+++....+....+ ..+..+.+++
T Consensus 236 g~~~V~vRls~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk 315 (402)
T 2hsa_B 236 GADRVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLR 315 (402)
T ss_dssp CGGGEEEEECSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHH
T ss_pred CCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHH
Confidence 4 5999998632 23478889999 999999874321111111 1345566777
Q ss_pred HHccCCCeEEEecCCCCHHHHHHHHHcC-CCEEEEchHHHHh
Q 021739 215 QAAKGRVPVFLDGGVRRGTDVFKALALG-ASGVFVGRPVPFS 255 (308)
Q Consensus 215 ~~~~~~ipvia~GGI~~~~d~~k~l~~G-Ad~V~ig~~~l~~ 255 (308)
+.+ ++|||++||| +++++.++|+.| ||+|++||+++..
T Consensus 316 ~~~--~iPvi~~G~i-~~~~a~~~l~~g~aD~V~igR~~l~d 354 (402)
T 2hsa_B 316 NAY--QGTFICSGGY-TRELGIEAVAQGDADLVSYGRLFISN 354 (402)
T ss_dssp HHC--SSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHC
T ss_pred HHC--CCCEEEeCCC-CHHHHHHHHHCCCCceeeecHHHHhC
Confidence 776 7899999999 999999999988 9999999999863
No 52
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=99.63 E-value=3.6e-15 Score=140.49 Aligned_cols=223 Identities=16% Similarity=0.099 Sum_probs=140.7
Q ss_pred eeecCcccCCceEeccccCcccC--CCHHHHH---HHHHHHHcCCceeecCCCCC--------------CHH------HH
Q 021739 3 TTVLGFNISMPIMIAPTAFQKMA--HPEGECA---TARAASAAGTIMTLSSWATS--------------SVE------EV 57 (308)
Q Consensus 3 t~~~g~~~~~Pi~iapm~~~~~~--~~~~~~~---~a~~a~~~g~~~~~s~~~~~--------------~~e------~i 57 (308)
.+|.+.+++++|++|||+..... .|. +.. +++.|+ |++++++++... +.+ .+
T Consensus 20 ~~ig~~~l~NRiv~aPm~~~~a~~g~pt-~~~~~yy~~rA~--g~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~k~l 96 (376)
T 1icp_A 20 CKMGKFELCHRVVLAPLTRQRSYGYIPQ-PHAILHYSQRST--NGGLLIGEATVISETGIGYKDVPGIWTKEQVEAWKPI 96 (376)
T ss_dssp EEETTEEESCSEEECCCCCCCCGGGSCC-HHHHHHHHHTCC--TTCEEECCCEECSGGGCCSTTCCBCSSHHHHHHHHHH
T ss_pred eeECCEEECCccEECCcCcCcCCCCCCC-HHHHHHHHHhcC--CeeEEEECceeeccccccCcccCccCCHHHHHHHHHH
Confidence 56788899999999999876211 111 222 455444 688888876322 112 22
Q ss_pred hc---cCCCCceEEeeec-------------------------------------CCc------------hHHHHHHHHH
Q 021739 58 SS---TGPGIRFFQLYVT-------------------------------------KHR------------NVDAQLVKRA 85 (308)
Q Consensus 58 ~~---~~~~~~~~Ql~~~-------------------------------------~d~------------~~~~~~~~~~ 85 (308)
.. ....+.++||+.. ..+ +.+.+..+++
T Consensus 97 ~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~AA~~a 176 (376)
T 1icp_A 97 VDAVHAKGGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIPQIVNEFRVAARNA 176 (376)
T ss_dssp HHHHHHTTCEEEEEEECCTTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCCEECCTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEEeecCCCCcCcccccCCCceecCCCCCCccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 21 1224779999851 112 3566777788
Q ss_pred HHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhcC
Q 021739 86 ERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITS 165 (308)
Q Consensus 86 ~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~~ 165 (308)
+++||++|.||..|-.. .+.|.-| ..+.| -+ .. | +++ . .+..+..++++++|+.++
T Consensus 177 ~~aGfDgVEih~a~GyL-------l~qFlsp-~~N~R-~D--------~y-G---Gsl-e--nR~r~~~eiv~aVr~avg 232 (376)
T 1icp_A 177 IEAGFDGVEIHGAHGYL-------IDQFMKD-QVNDR-SD--------KY-G---GSL-E--NRCRFALEIVEAVANEIG 232 (376)
T ss_dssp HHTTCSEEEEEECTTSH-------HHHHHCT-TTCCC-CS--------TT-S---SSH-H--HHHHHHHHHHHHHHHHHC
T ss_pred HHcCCCEEEEcCccchh-------hhhccCC-cccCC-CC--------cc-C---ccH-H--HhHHHHHHHHHHHHHHhc
Confidence 89999999999987221 0111111 11100 00 01 1 111 1 245667899999999884
Q ss_pred -CCEEEEecCC---------------HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCC
Q 021739 166 -LPILVKGVLT---------------AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 229 (308)
Q Consensus 166 -~Pv~vK~~~~---------------~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI 229 (308)
-||.+|+... .+.++.+.++|+|+|.+++....+.......+..+.++++.+ ++|||++|||
T Consensus 233 ~~~V~vrls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~--~iPvi~~G~i 310 (376)
T 1icp_A 233 SDRVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAY--KGTFIVAGGY 310 (376)
T ss_dssp GGGEEEEECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHC--CSCEEEESSC
T ss_pred CCceEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHc--CCCEEEeCCC
Confidence 3999998631 245788899999999998643111000001123346666666 7899999999
Q ss_pred CCHHHHHHHHHcC-CCEEEEchHHHHh
Q 021739 230 RRGTDVFKALALG-ASGVFVGRPVPFS 255 (308)
Q Consensus 230 ~~~~d~~k~l~~G-Ad~V~ig~~~l~~ 255 (308)
+++++.++|+.| ||+|++||+++..
T Consensus 311 -~~~~a~~~l~~g~aD~V~~gR~~l~~ 336 (376)
T 1icp_A 311 -DREDGNRALIEDRADLVAYGRLFISN 336 (376)
T ss_dssp -CHHHHHHHHHTTSCSEEEESHHHHHC
T ss_pred -CHHHHHHHHHCCCCcEEeecHHHHhC
Confidence 899999999988 9999999999863
No 53
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=99.62 E-value=9.3e-14 Score=129.66 Aligned_cols=228 Identities=17% Similarity=0.161 Sum_probs=142.6
Q ss_pred ceeecCcccCCceEeccccCcccC---CC-HHHHHHHHHHHHcCCceeecCCCCC--------------CH------HHH
Q 021739 2 TTTVLGFNISMPIMIAPTAFQKMA---HP-EGECATARAASAAGTIMTLSSWATS--------------SV------EEV 57 (308)
Q Consensus 2 ~t~~~g~~~~~Pi~iapm~~~~~~---~~-~~~~~~a~~a~~~g~~~~~s~~~~~--------------~~------e~i 57 (308)
..+|.+.++++.|++|||+.+... .| +-...+-..-++-|+++++++.... +. +.+
T Consensus 7 p~~ig~~~l~NRiv~apm~~~~~~~~g~~~~~~~~~y~~rA~gg~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~ 86 (349)
T 3hgj_A 7 PLELGGLRLKNRLAMSPMCQYSATLEGEVTDWHLLHYPTRALGGVGLILVEATAVEPLGRISPYDLGIWSEDHLPGLKEL 86 (349)
T ss_dssp CEEETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSGGGHHHHHHH
T ss_pred CeeECCEEecCceEECCcCcCCcCCCCCCCHHHHHHHHHHhcCCceEEEecceeecccccCCCCcCccCcHHHHHHHHHH
Confidence 356888999999999999754211 12 1223443444446788888754211 11 112
Q ss_pred hc---cCCCCceEEeeecC---C-----------------------------------------chHHHHHHHHHHHcCC
Q 021739 58 SS---TGPGIRFFQLYVTK---H-----------------------------------------RNVDAQLVKRAERAGF 90 (308)
Q Consensus 58 ~~---~~~~~~~~Ql~~~~---d-----------------------------------------~~~~~~~~~~~~~~g~ 90 (308)
.. ......++||.... . .+.+.+..++++++|+
T Consensus 87 ~~~vh~~G~~i~~Ql~H~Gr~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGf 166 (349)
T 3hgj_A 87 ARRIREAGAVPGIQLAHAGRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLDEAGMERILQAFVEGARRALRAGF 166 (349)
T ss_dssp HHHHHHTTCEEEEEEECCGGGCCBCCGGGTCCBCCCCCEESSSCCSSTTCCCCEECCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhCCCeEEEEeccCCccccccccccccccCCCcccCCCcccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 21 12235678886321 0 0123345566778999
Q ss_pred cEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhc--CCCE
Q 021739 91 KAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTIT--SLPI 168 (308)
Q Consensus 91 ~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~--~~Pv 168 (308)
++|.||..|-.. .+.|.-| ..+.| -+ .. | ++ +. ....+..|.++++|+.+ +.||
T Consensus 167 DgVEih~a~GyL-------l~qFlsp-~~N~R-~D--------~y-G---Gs-le--nR~r~~~eiv~aVR~avG~d~pV 222 (349)
T 3hgj_A 167 QVIELHMAHGYL-------LSSFLSP-LSNQR-TD--------AY-G---GS-LE--NRMRFPLQVAQAVREVVPRELPL 222 (349)
T ss_dssp CEEEEEECTTSH-------HHHHHCT-TTCCC-CS--------TT-S---SS-HH--HHHHHHHHHHHHHHHHSCTTSCE
T ss_pred CEEEECCccchH-------HHHhcCC-ccccc-CC--------CC-C---cC-HH--HHHHHHHHHHHHHHHHhcCCceE
Confidence 999999987210 0111111 00100 00 01 1 11 11 23556789999999998 7999
Q ss_pred EEEecC--------CHHH----HHHHHHcCCcEEEEecccccC---CCCCc-chHHHHHHHHHHccCCCeEEEecCCCCH
Q 021739 169 LVKGVL--------TAED----ASLAIQYGAAGIIVSNHGARQ---LDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRG 232 (308)
Q Consensus 169 ~vK~~~--------~~e~----a~~~~~~G~d~i~v~~~gg~~---~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~ 232 (308)
.+|+.. +.++ ++.+.++|+|+|.+++.+-.. ....+ ..+..+.++++.+ ++|||++|||+++
T Consensus 223 ~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~t~ 300 (349)
T 3hgj_A 223 FVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV--GLRTGAVGLITTP 300 (349)
T ss_dssp EEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH--CCEEEECSSCCCH
T ss_pred EEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc--CceEEEECCCCCH
Confidence 999874 3443 788899999999998532111 11112 2456677777776 7999999999999
Q ss_pred HHHHHHHHcC-CCEEEEchHHHHh
Q 021739 233 TDVFKALALG-ASGVFVGRPVPFS 255 (308)
Q Consensus 233 ~d~~k~l~~G-Ad~V~ig~~~l~~ 255 (308)
+++.++++.| ||+|++||+++..
T Consensus 301 e~a~~~l~~G~aD~V~iGR~~lan 324 (349)
T 3hgj_A 301 EQAETLLQAGSADLVLLGRVLLRD 324 (349)
T ss_dssp HHHHHHHHTTSCSEEEESTHHHHC
T ss_pred HHHHHHHHCCCceEEEecHHHHhC
Confidence 9999999999 9999999999964
No 54
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.59 E-value=2.9e-15 Score=145.76 Aligned_cols=139 Identities=22% Similarity=0.293 Sum_probs=110.0
Q ss_pred HHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccC-------CCCCcchHHHHHHHHHHcc-CCCeEEE
Q 021739 154 WKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ-------LDYVPATVMALEEVVQAAK-GRVPVFL 225 (308)
Q Consensus 154 ~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~-------~~~~~~~~~~l~~i~~~~~-~~ipvia 225 (308)
++.++++++.+++|+++|.+.+.+.++.+. |+|+|.+ +.|+.. ..++.++...+.++.+... .++|||+
T Consensus 257 L~~I~~l~~~~~vpvi~k~v~~~~~a~~l~--G~d~v~v-g~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~~~~vpVia 333 (486)
T 2cu0_A 257 IKSMKEMRQKVDADFIVGNIANPKAVDDLT--FADAVKV-GIGPGSICTTRIVAGVGVPQITAVAMVADRAQEYGLYVIA 333 (486)
T ss_dssp HHHHHHHHHTCCSEEEEEEECCHHHHTTCT--TSSEEEE-CSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHHTCEEEE
T ss_pred hhHHHHHHHHhCCccccCCcCCHHHHHHhh--CCCeEEE-eeeeccceeeeEEeecCcchHHHHHHHHHHHHHcCCcEEe
Confidence 567889999889999999999999998888 9999999 443322 1234556666655544321 1699999
Q ss_pred ecCCCCHHHHHHHHHcCCCEEEEchHHHHh--------------------cc-------------------------cCC
Q 021739 226 DGGVRRGTDVFKALALGASGVFVGRPVPFS--------------------LA-------------------------VDG 260 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~--------------------~~-------------------------~~G 260 (308)
+|||+++.|++|+|++|||+|++|++|+.. ++ .+|
T Consensus 334 ~GGi~~~~di~kalalGA~~v~~g~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~~~~~r~~~g~~~~~~~~~~~g 413 (486)
T 2cu0_A 334 DGGIRYSGDIVKAIAAGADAVMLGNLLAGTKEAPGKEVIINGRKYKQYRGMGSLGAMMKGGAERYYQGGYMKTRKFVPEG 413 (486)
T ss_dssp ESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTCCSCEEEETTEEEEEEECTTSHHHHTC----------CCCCSCSSCCB
T ss_pred cCCCCCHHHHHHHHHcCCCceeeChhhhcCccCchhheeeCCcEEEEeecCCCHHHHhcccccccccccccccccccccc
Confidence 999999999999999999999999999842 11 122
Q ss_pred HH-------HHHHHHHHHHHHHHHHHHHcCCCCHhhhcccce
Q 021739 261 EA-------GVRKVLQMLRDEFELTMALSGCRSLKEITRNHI 295 (308)
Q Consensus 261 ~~-------~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~~~~ 295 (308)
.+ .+.++++.+..+|+..|.++|+.++.+|+....
T Consensus 414 ~~~~~~~~~~~~~~~~~l~~~lr~~m~~~G~~~~~~l~~~~~ 455 (486)
T 2cu0_A 414 VEGVVPYRGTVSEVLYQLVGGLKAGMGYVGARNIRELKEKGE 455 (486)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHHCC
T ss_pred eEEeecccCCHHHHHHHHHHHHHHhcccCCcCCHHHHHhhCC
Confidence 11 188999999999999999999999999987644
No 55
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=99.58 E-value=2.1e-13 Score=126.70 Aligned_cols=217 Identities=16% Similarity=0.138 Sum_probs=140.2
Q ss_pred eeecCcccCCceEeccccCcccC---CC-HHHHHHHHHHHHcCCceeecCCCCC--------------CHHH------Hh
Q 021739 3 TTVLGFNISMPIMIAPTAFQKMA---HP-EGECATARAASAAGTIMTLSSWATS--------------SVEE------VS 58 (308)
Q Consensus 3 t~~~g~~~~~Pi~iapm~~~~~~---~~-~~~~~~a~~a~~~g~~~~~s~~~~~--------------~~e~------i~ 58 (308)
.+|.+.++++.|++|||+.+... .| +....+-..-++-|+++++++.... +.+. +.
T Consensus 8 ~~ig~~~l~NRiv~apm~~~~~~~~g~~t~~~~~yy~~rA~gG~Gliite~~~V~~~g~~~~~~~gi~~d~~i~~~~~~~ 87 (343)
T 3kru_A 8 LKIKDITIKNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHDLGIWNDEQVKELKKIV 87 (343)
T ss_dssp EEETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSHHHHHHHHHHH
T ss_pred ceeeeeeeeeeecccchhheecccCCCCCceeeeeeehhhccceeeeeehhhhhhhcCccccccccccCHHHHHHHHHHH
Confidence 56788999999999999754221 11 1223444444456788888754211 1122 22
Q ss_pred c---cCCCCceEEeeecCC-----------------------------------chHHHHHHHHHHHcCCcEEEEe----
Q 021739 59 S---TGPGIRFFQLYVTKH-----------------------------------RNVDAQLVKRAERAGFKAIALT---- 96 (308)
Q Consensus 59 ~---~~~~~~~~Ql~~~~d-----------------------------------~~~~~~~~~~~~~~g~~~i~i~---- 96 (308)
. ......++||..... .+.+.+..++++++||++|+||
T Consensus 88 ~~vh~~G~~i~~QL~H~Gr~~~~~g~~~~apS~i~~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahG 167 (343)
T 3kru_A 88 DICKANGAVMGIQLAHAGRKCNISYEDVVGPSPIKAGDRYKLPRELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHG 167 (343)
T ss_dssp HHHHHTTCEEEEEEECCGGGCCCTTSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTT
T ss_pred HHHhcCCceEeeehhhccCccCcchhhccCCCcCCCCccccCchhcCHHHHHHHHHHHHHHHhhccccCCceEEEecccc
Confidence 1 122367889864210 1223345566778999999999
Q ss_pred -----cCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhc--CCCEE
Q 021739 97 -----VDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTIT--SLPIL 169 (308)
Q Consensus 97 -----~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~--~~Pv~ 169 (308)
..||...+|.- .. | ++.. ....+..|.++++|+.+ ++||.
T Consensus 168 YLl~qFlsp~~N~R~D--------------------------~y-G---Gsle---nR~rf~~eiv~aVr~avg~d~pv~ 214 (343)
T 3kru_A 168 YLIHEFLSPLSNKRKD--------------------------EY-G---NSIE---NRARFLIEVIDEVRKNWPENKPIF 214 (343)
T ss_dssp SHHHHHHCTTTCCCCS--------------------------TT-S---SSHH---HHTHHHHHHHHHHHHTSCTTSCEE
T ss_pred hhHHHhhcccccccch--------------------------hh-c---cchH---hHHHHHHHHHHHHHhcCCccCCeE
Confidence 34554322210 01 1 1111 24567789999999998 68999
Q ss_pred EEecCC--------H----HHHHHHHHcCCcEEEEecccccC--CCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHH
Q 021739 170 VKGVLT--------A----EDASLAIQYGAAGIIVSNHGARQ--LDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTD 234 (308)
Q Consensus 170 vK~~~~--------~----e~a~~~~~~G~d~i~v~~~gg~~--~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d 234 (308)
+|+..+ . +.++.+.++ +|+|.++..+... ....+ ..+..+.++++.+ ++|||++|||+++++
T Consensus 215 vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~t~e~ 291 (343)
T 3kru_A 215 VRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRC--NIKTSAVGLITTQEL 291 (343)
T ss_dssp EEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--TCEEEEESSCCCHHH
T ss_pred EEeechhhhccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhc--CcccceeeeeeHHHH
Confidence 998742 3 347788889 9999997422111 00111 2456677777777 799999999999999
Q ss_pred HHHHHHcC-CCEEEEchHHHHh
Q 021739 235 VFKALALG-ASGVFVGRPVPFS 255 (308)
Q Consensus 235 ~~k~l~~G-Ad~V~ig~~~l~~ 255 (308)
+.++++.| ||+|++||+++..
T Consensus 292 Ae~~l~~G~aD~V~iGR~~lan 313 (343)
T 3kru_A 292 AEEILSNERADLVALGRELLRN 313 (343)
T ss_dssp HHHHHHTTSCSEEEESHHHHHC
T ss_pred HHHHHhchhhHHHHHHHHHhcC
Confidence 99999998 9999999999864
No 56
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.55 E-value=2.1e-13 Score=137.53 Aligned_cols=226 Identities=14% Similarity=0.065 Sum_probs=144.9
Q ss_pred eeecCcccCCceEeccccCcccCCCH---HHHH-HHHHHHHcCCceeecCCCCC--------------C------HHHHh
Q 021739 3 TTVLGFNISMPIMIAPTAFQKMAHPE---GECA-TARAASAAGTIMTLSSWATS--------------S------VEEVS 58 (308)
Q Consensus 3 t~~~g~~~~~Pi~iapm~~~~~~~~~---~~~~-~a~~a~~~g~~~~~s~~~~~--------------~------~e~i~ 58 (308)
.+|.+.+++++|++|||+.+.-..+. .... +++.| +.|++++++++.+. + ++.+.
T Consensus 9 ~~ig~~~l~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra-~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (671)
T 1ps9_A 9 LDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERA-RHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTIT 87 (671)
T ss_dssp EECSSCEESSSEEECCCCCSCTTSTTHHHHHHHHHHHHH-HTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHHH
T ss_pred eeECCEEEcCceEECCccCCcCCCCCCcHHHHHHHHHHh-cCCCCEEEecccccCccccCCCCCCccCCHHHHHHHHHHH
Confidence 57888999999999999864211121 1123 33444 67899999876211 1 11121
Q ss_pred c---cCCCCceEEeeecC---------------------Cc------------hHHHHHHHHHHHcCCcEEEEecCCCCC
Q 021739 59 S---TGPGIRFFQLYVTK---------------------HR------------NVDAQLVKRAERAGFKAIALTVDTPRL 102 (308)
Q Consensus 59 ~---~~~~~~~~Ql~~~~---------------------d~------------~~~~~~~~~~~~~g~~~i~i~~~~p~~ 102 (308)
. ....+.++||+... ++ +.+.+..++++++||++|.||..|...
T Consensus 88 ~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl 167 (671)
T 1ps9_A 88 EAVHQEGGKIALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYL 167 (671)
T ss_dssp HHHHHTTCCEEEEECCCGGGSBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSH
T ss_pred HHHHhcCCEEEEEeccCCcccCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchH
Confidence 1 12247899998521 22 456667778889999999999876321
Q ss_pred CcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhc--CCCEEEEecC------
Q 021739 103 GRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTIT--SLPILVKGVL------ 174 (308)
Q Consensus 103 ~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~--~~Pv~vK~~~------ 174 (308)
.+.|.-| ..+.| -+ .. | ++ +. .++.+..+.++++|+.+ ++||++|+..
T Consensus 168 -------~~qFlsp-~~n~r-~d--------~y-G---gs-~~--~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~ 223 (671)
T 1ps9_A 168 -------INEFLTL-RTNQR-SD--------QW-G---GD-YR--NRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVED 223 (671)
T ss_dssp -------HHHHHCT-TTCCC-CS--------TT-S---SS-HH--HHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTT
T ss_pred -------HHHhCCC-ccCCC-cC--------cC-C---Cc-HH--HHHHHHHHHHHHHHHHcCCCceEEEEECccccCCC
Confidence 1112212 11110 00 01 1 11 11 24566789999999998 7999999862
Q ss_pred --CH----HHHHHHHHcCCcEEEEecccccC------CCCCcc-hHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHc
Q 021739 175 --TA----EDASLAIQYGAAGIIVSNHGARQ------LDYVPA-TVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALAL 241 (308)
Q Consensus 175 --~~----e~a~~~~~~G~d~i~v~~~gg~~------~~~~~~-~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~ 241 (308)
+. +.++.+.++|+|+|.++++.... ....+. .+..+.++++.+ ++|||++|||++++++.++++.
T Consensus 224 g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~iPvi~~Ggi~~~~~a~~~l~~ 301 (671)
T 1ps9_A 224 GGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHV--SLPLVTTNRINDPQVADDILSR 301 (671)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSC--SSCEEECSSCCSHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhc--CceEEEeCCCCCHHHHHHHHHc
Confidence 33 34788899999999998632111 011111 235556665554 7999999999999999999999
Q ss_pred C-CCEEEEchHHHHh
Q 021739 242 G-ASGVFVGRPVPFS 255 (308)
Q Consensus 242 G-Ad~V~ig~~~l~~ 255 (308)
| ||+|++||+++..
T Consensus 302 g~aD~V~~gR~~l~~ 316 (671)
T 1ps9_A 302 GDADMVSMARPFLAD 316 (671)
T ss_dssp TSCSEEEESTHHHHC
T ss_pred CCCCEEEeCHHHHhC
Confidence 8 9999999999863
No 57
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=99.53 E-value=2.3e-13 Score=129.63 Aligned_cols=153 Identities=14% Similarity=0.142 Sum_probs=100.8
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHH
Q 021739 78 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 157 (308)
Q Consensus 78 ~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 157 (308)
+.+..++++++|||+|+|+..| |+- .+.|.-| ..+.| -+ .. .++.+. ....+..|++
T Consensus 172 F~~AA~rA~~AGfDgVEIH~ah---GYL----l~QFlSp-~~N~R-tD--------~y----GGs~le--nR~Rf~~evv 228 (419)
T 3l5a_A 172 YRDATLRAIKAGFDGVEISIAQ---RLL----IQTFFST-FSNRR-TD--------HY----GADSLK--NRARLCLEVM 228 (419)
T ss_dssp HHHHHHHHHHTTCSEEEEECCT---TSH----HHHHHCT-TTCCC-CS--------TT----STTCHH--HHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECCcc---chH----HHHccCC-ccccc-cc--------CC----CCchhh--hhhHHHHHHH
Confidence 3455667788999999999876 111 1112111 01100 00 01 111211 2345678999
Q ss_pred HHHHHhc------CCCEEEEecC----------CH----HHHHHHHH-cCCcEEEEecccc----c-CCCCCc-chHHHH
Q 021739 158 KWLQTIT------SLPILVKGVL----------TA----EDASLAIQ-YGAAGIIVSNHGA----R-QLDYVP-ATVMAL 210 (308)
Q Consensus 158 ~~ir~~~------~~Pv~vK~~~----------~~----e~a~~~~~-~G~d~i~v~~~gg----~-~~~~~~-~~~~~l 210 (308)
+++|+.+ +.||.+|+.. +. +.++.+.+ +|+|+|.+++.+. . ....+. ..+..+
T Consensus 229 ~aVr~~v~~~~~~~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a 308 (419)
T 3l5a_A 229 RAVQEVIDKEAPDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVN 308 (419)
T ss_dssp HHHHHHHHHHCCTTCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHH
T ss_pred HHHHHHHhhhcCCCeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHH
Confidence 9999876 6899999863 33 34788888 9999999987542 1 111111 123455
Q ss_pred HHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 021739 211 EEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 211 ~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
..+++.+.+++|||++|||++++++.++++. ||+|++||+++.
T Consensus 309 ~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~-aDlVaiGR~~Ia 351 (419)
T 3l5a_A 309 QIVYEHLAGRIPLIASGGINSPESALDALQH-ADMVGMSSPFVT 351 (419)
T ss_dssp HHHHHHHTTSSCEEECSSCCSHHHHHHHGGG-CSEEEESTHHHH
T ss_pred HHHHHHcCCCCeEEEECCCCCHHHHHHHHHh-CCcHHHHHHHHH
Confidence 6666666557999999999999999999999 999999999985
No 58
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=99.51 E-value=7.2e-13 Score=124.24 Aligned_cols=104 Identities=20% Similarity=0.067 Sum_probs=81.2
Q ss_pred cccCHHHHHHHHHhc--CCCEEEEecC---------CH----HHHHHHHHcCCcEEEEecccccC---CCCCc-chHHHH
Q 021739 150 RSLNWKDVKWLQTIT--SLPILVKGVL---------TA----EDASLAIQYGAAGIIVSNHGARQ---LDYVP-ATVMAL 210 (308)
Q Consensus 150 ~~~~~~~i~~ir~~~--~~Pv~vK~~~---------~~----e~a~~~~~~G~d~i~v~~~gg~~---~~~~~-~~~~~l 210 (308)
..+..|.++++|+.+ +.||.+|+.. +. +.++.+.++|+|+|.+++.+... ...++ ..+..+
T Consensus 208 ~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~ 287 (363)
T 3l5l_A 208 SRFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIA 287 (363)
T ss_dssp HHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHH
T ss_pred HHHHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHH
Confidence 456789999999988 6899999863 12 23788899999999998743111 11122 245666
Q ss_pred HHHHHHccCCCeEEEecCCCCHHHHHHHHHcC-CCEEEEchHHHHh
Q 021739 211 EEVVQAAKGRVPVFLDGGVRRGTDVFKALALG-ASGVFVGRPVPFS 255 (308)
Q Consensus 211 ~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~G-Ad~V~ig~~~l~~ 255 (308)
.++++.+ ++|||++|||++++++.++++.| ||+|++||+++..
T Consensus 288 ~~ir~~~--~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~~lan 331 (363)
T 3l5l_A 288 ERVRREA--KLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLAD 331 (363)
T ss_dssp HHHHHHH--TCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHHC
T ss_pred HHHHHHc--CCcEEEeCCCCCHHHHHHHHHCCCccEEEecHHHHhC
Confidence 7777776 79999999999999999999999 9999999999974
No 59
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.50 E-value=7.6e-13 Score=134.70 Aligned_cols=227 Identities=12% Similarity=0.076 Sum_probs=142.6
Q ss_pred ceeecCcccCCceEeccccCccc-CCCHHHHHHHHHHHHcCCceeecCCCCC---------------CHH------HHhc
Q 021739 2 TTTVLGFNISMPIMIAPTAFQKM-AHPEGECATARAASAAGTIMTLSSWATS---------------SVE------EVSS 59 (308)
Q Consensus 2 ~t~~~g~~~~~Pi~iapm~~~~~-~~~~~~~~~a~~a~~~g~~~~~s~~~~~---------------~~e------~i~~ 59 (308)
..+|.+.++++||++|||+.+.- ..|.....+-+.-++.|++++++++.+. +.+ ++..
T Consensus 12 p~~ig~~~l~NRiv~apm~~~~~~~~~~~~~~~y~~ra~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (729)
T 1o94_A 12 PIQIGPKTLRNRFYQVPHCIGAGSDKPGFQSAHRSVKAEGGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNLKAMTD 91 (729)
T ss_dssp CEEETTEEESSSEEECCCCCSCTTTCHHHHHHHHHHHHHTTCSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHHHHHHH
T ss_pred CeeECCEEECCccEECCCcCCcCCCCcHHHHHHHHHHhcCCCCEEEEcceEecCcccCCCCCCCccCChHHhHHHHHHHH
Confidence 35788999999999999976411 1222222333333377899988865211 011 1211
Q ss_pred ---cCCCCceEEeeecC--------------------------C------------chHHHHHHHHHHHcCCcEEEEecC
Q 021739 60 ---TGPGIRFFQLYVTK--------------------------H------------RNVDAQLVKRAERAGFKAIALTVD 98 (308)
Q Consensus 60 ---~~~~~~~~Ql~~~~--------------------------d------------~~~~~~~~~~~~~~g~~~i~i~~~ 98 (308)
....+.++||+... . .+.+.+..++++++||++|+||..
T Consensus 92 ~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a 171 (729)
T 1o94_A 92 EVHKYGALAGVELWYGGAHAPNMESRATPRGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGA 171 (729)
T ss_dssp HHHTTTCEEEEEEECCGGGSCCTTTCCCCEESSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred HHHhCCCeEEEEecCCCccccccccCCCCcCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccc
Confidence 12237899998520 0 145667777888999999999998
Q ss_pred CCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhc--CCCEEEEecC--
Q 021739 99 TPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTIT--SLPILVKGVL-- 174 (308)
Q Consensus 99 ~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~--~~Pv~vK~~~-- 174 (308)
|-.. .+.|.-| ..+.| -+ .. | +++ . .++.+..|+++++|+.+ +.||++|+..
T Consensus 172 ~gyL-------l~qFlsp-~~N~R-~D--------~y-G---Gs~-e--nR~r~~~eiv~avr~~vg~~~pv~vrls~~~ 227 (729)
T 1o94_A 172 HSYL-------PLQFLNP-YYNKR-TD--------KY-G---GSL-E--NRARFWLETLEKVKHAVGSDCAIATRFGVDT 227 (729)
T ss_dssp TTCH-------HHHHHCT-TTCCC-CS--------TT-S---SSH-H--HHTHHHHHHHHHHHHHHTTTSEEEEEEEEEC
T ss_pred cchH-------HHHhcCC-ccCCC-cC--------cC-C---CCH-H--HHhHHHHHHHHHHHHHhCCCceEEEEEcccc
Confidence 8211 1122212 11100 00 11 1 111 1 35677889999999998 7999999852
Q ss_pred -------C-H----HHHHHHHHcCCcEEEEecccc-----c---CCCCCcc-hHHHHHHHHHHccCCCeEEEecCCCCHH
Q 021739 175 -------T-A----EDASLAIQYGAAGIIVSNHGA-----R---QLDYVPA-TVMALEEVVQAAKGRVPVFLDGGVRRGT 233 (308)
Q Consensus 175 -------~-~----e~a~~~~~~G~d~i~v~~~gg-----~---~~~~~~~-~~~~l~~i~~~~~~~ipvia~GGI~~~~ 233 (308)
+ . +.++.+.+ |+|++.++..+. . ....... .+....++++.+ ++|||++|||.+++
T Consensus 228 ~~~~~G~~~~~~~~~~~~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pvi~~G~i~~~~ 304 (729)
T 1o94_A 228 VYGPGQIEAEVDGQKFVEMADS-LVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVS--KKPVLGVGRYTDPE 304 (729)
T ss_dssp SSCTTSCCTTTHHHHHHHHHGG-GCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTC--SSCEECCSCCCCHH
T ss_pred CcCCCCCCchHHHHHHHHHHHh-hcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHC--CCEEEEeCCCCCHH
Confidence 1 2 23555555 899999876431 0 1111111 355566776665 79999999999999
Q ss_pred HHHHHHHcC-CCEEEEchHHHHh
Q 021739 234 DVFKALALG-ASGVFVGRPVPFS 255 (308)
Q Consensus 234 d~~k~l~~G-Ad~V~ig~~~l~~ 255 (308)
++.++++.| ||+|++||+++..
T Consensus 305 ~a~~~l~~g~aD~V~~gR~~l~~ 327 (729)
T 1o94_A 305 KMIEIVTKGYADIIGCARPSIAD 327 (729)
T ss_dssp HHHHHHHTTSCSBEEESHHHHHC
T ss_pred HHHHHHHCCCCCEEEeCchhhcC
Confidence 999999998 9999999999863
No 60
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.50 E-value=4.2e-13 Score=135.81 Aligned_cols=227 Identities=10% Similarity=0.017 Sum_probs=144.2
Q ss_pred eeecCcccCCceEeccccCc-ccCCCHHHHHHHHHHHHcCCceeecCCCCCC---------------H------HHHhc-
Q 021739 3 TTVLGFNISMPIMIAPTAFQ-KMAHPEGECATARAASAAGTIMTLSSWATSS---------------V------EEVSS- 59 (308)
Q Consensus 3 t~~~g~~~~~Pi~iapm~~~-~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~---------------~------e~i~~- 59 (308)
.+|.+.+++++|++|||+.. +...+.....+.+..++.|++++++++...+ . +++..
T Consensus 18 ~~ig~~~l~NRiv~apm~~~~~~~~~~~~~~~~~~~a~gG~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (690)
T 3k30_A 18 VQIGPFTTKNRFYQVPHCNGMGYRDPSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIADA 97 (690)
T ss_dssp CEETTEECSSSEEECCCCCSCSSSCHHHHHHHHHHHHHTTCSEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHHHHHHH
T ss_pred eeECCEEECCCeEeCCCcCCCCCCChHHHHHHHHHHhccCCEEEEecceEeccccccCCCcCCccCCHHHHHHHHHHHHH
Confidence 56788999999999999743 1122222234566677889999988752211 0 11111
Q ss_pred --cCCCCceEEeeecC-------------------------C---------------chHHHHHHHHHHHcCCcEEEEec
Q 021739 60 --TGPGIRFFQLYVTK-------------------------H---------------RNVDAQLVKRAERAGFKAIALTV 97 (308)
Q Consensus 60 --~~~~~~~~Ql~~~~-------------------------d---------------~~~~~~~~~~~~~~g~~~i~i~~ 97 (308)
....+.++||+... + .+.+.+..++++++|||+|+|+.
T Consensus 98 vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~~~p~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~ 177 (690)
T 3k30_A 98 IHEGGGLAGIELAHNGMNAPNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYG 177 (690)
T ss_dssp HHHTTCEEEEEEECCGGGCCCTTTCCCCEESSSCBSCSSCCCSCBCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred HHhcCCEEEEEccCCcccccccccCCCccCCCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcc
Confidence 12236899998311 0 14556777888899999999998
Q ss_pred CCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhc--CCCEEEEecC-
Q 021739 98 DTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTIT--SLPILVKGVL- 174 (308)
Q Consensus 98 ~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~--~~Pv~vK~~~- 174 (308)
.|+.. +.+.|.-| ..+.| -+ .. | ++. +....+..|+++++|+.+ +.||.+|+..
T Consensus 178 a~gy~------L~~qFlsp-~~N~R-~D--------~y-G---Gs~---enR~r~~~ei~~avr~~~g~~~~v~~r~s~~ 234 (690)
T 3k30_A 178 AHGYS------GVHHFLSK-RYNQR-TD--------EY-G---GSL---ENRMRLLRELLEDTLDECAGRAAVACRITVE 234 (690)
T ss_dssp CTTCS------HHHHHHCT-TTCCC-CS--------TT-S---SSH---HHHTHHHHHHHHHHHHHHTTSSEEEEEEECC
T ss_pred cccch------HHHHhCCC-ccCCC-cc--------cc-C---CCH---HHHHHHHHHHHHHHHHHhCCCceEEEEECcc
Confidence 87650 11223323 11111 00 11 1 111 124567789999999998 6799999852
Q ss_pred -------CHH----HHHHHHHcCCcEEEEecccc-----cCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH
Q 021739 175 -------TAE----DASLAIQYGAAGIIVSNHGA-----RQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK 237 (308)
Q Consensus 175 -------~~e----~a~~~~~~G~d~i~v~~~gg-----~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k 237 (308)
+.+ .++.+.+ |+|++.++..+. ....... ..+....++++.+ ++|||++|||++++++.+
T Consensus 235 ~~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pvi~~G~i~~~~~a~~ 311 (690)
T 3k30_A 235 EEIDGGITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLT--TKPVVGVGRFTSPDAMVR 311 (690)
T ss_dssp CCSTTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGC--SSCEEECSCCCCHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHc--CCeEEEeCCCCCHHHHHH
Confidence 233 3556655 899999986421 0111111 1234455555555 799999999999999999
Q ss_pred HHHcC-CCEEEEchHHHHh
Q 021739 238 ALALG-ASGVFVGRPVPFS 255 (308)
Q Consensus 238 ~l~~G-Ad~V~ig~~~l~~ 255 (308)
+++.| ||+|++||+++..
T Consensus 312 ~l~~g~~d~v~~gR~~~~~ 330 (690)
T 3k30_A 312 QIKAGILDLIGAARPSIAD 330 (690)
T ss_dssp HHHTTSCSEEEESHHHHHC
T ss_pred HHHCCCcceEEEcHHhHhC
Confidence 99988 9999999999853
No 61
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=99.46 E-value=2.8e-12 Score=119.82 Aligned_cols=141 Identities=16% Similarity=0.027 Sum_probs=96.5
Q ss_pred HHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHH
Q 021739 80 QLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKW 159 (308)
Q Consensus 80 ~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ 159 (308)
+..++++++||++|.|+..| |+-. +.|.-| ..+.| -+ .. | +++. ....+..|.+++
T Consensus 165 ~AA~~A~~aGfDgVEih~a~---GYLl----~QFLsp-~~N~R-tD--------~y-G---Gsle---nR~rf~~evv~a 220 (361)
T 3gka_A 165 RGAENARAAGFDGVEVHGAN---GYLL----DQFLQD-SANRR-TD--------AY-G---GSIE---NRARLLLEVVDA 220 (361)
T ss_dssp HHHHHHHHTTCSEEEEECCT---TSHH----HHHHST-TTCCC-CS--------TT-S---SSHH---HHSHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCcC---ccHH----HhccCc-ccccc-cC--------CC-C---CChh---hcHHHHHHHHHH
Confidence 45567788999999999877 1111 111111 01100 00 01 1 1111 245677899999
Q ss_pred HHHhcC-CCEEEEecCC-----------H----HHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeE
Q 021739 160 LQTITS-LPILVKGVLT-----------A----EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 160 ir~~~~-~Pv~vK~~~~-----------~----e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipv 223 (308)
+|+.++ -||.+|+... . +.++.+.++|+|+|.+++.. .++ ..+.++++.+ ++||
T Consensus 221 Vr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~-----~~~---~~~~~ik~~~--~iPv 290 (361)
T 3gka_A 221 AIDVWSAARVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESF-----GGD---AIGQQLKAAF--GGPF 290 (361)
T ss_dssp HHHHHCGGGEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC-----STT---CCHHHHHHHH--CSCE
T ss_pred HHHHcCCCeEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCC-----CCH---HHHHHHHHHc--CCCE
Confidence 999874 3999998742 2 34788899999999998643 112 2345666666 7899
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEchHHHHh
Q 021739 224 FLDGGVRRGTDVFKALALG-ASGVFVGRPVPFS 255 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~G-Ad~V~ig~~~l~~ 255 (308)
|++||| +++++.++++.| ||+|++||+++..
T Consensus 291 i~~Ggi-t~e~a~~~l~~G~aD~V~iGR~~lad 322 (361)
T 3gka_A 291 IVNENF-TLDSAQAALDAGQADAVAWGKLFIAN 322 (361)
T ss_dssp EEESSC-CHHHHHHHHHTTSCSEEEESHHHHHC
T ss_pred EEeCCC-CHHHHHHHHHcCCccEEEECHHhHhC
Confidence 999999 999999999998 9999999999864
No 62
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=99.46 E-value=3.1e-12 Score=119.56 Aligned_cols=96 Identities=18% Similarity=-0.012 Sum_probs=76.1
Q ss_pred ccccCHHHHHHHHHhcC-CCEEEEecCC-----------H----HHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHH
Q 021739 149 DRSLNWKDVKWLQTITS-LPILVKGVLT-----------A----EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEE 212 (308)
Q Consensus 149 d~~~~~~~i~~ir~~~~-~Pv~vK~~~~-----------~----e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~ 212 (308)
...+..|.++++|+.++ -||.+|+... . +.++.+.++|+|+|.+++.. .++ ..+.+
T Consensus 202 R~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~-----~~~---~~~~~ 273 (362)
T 4ab4_A 202 RARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSRERE-----ADD---SIGPL 273 (362)
T ss_dssp HHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCC-----CTT---CCHHH
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCC-----CCH---HHHHH
Confidence 45667899999999874 3999998732 2 23788899999999998643 122 23456
Q ss_pred HHHHccCCCeEEEecCCCCHHHHHHHHHcC-CCEEEEchHHHHh
Q 021739 213 VVQAAKGRVPVFLDGGVRRGTDVFKALALG-ASGVFVGRPVPFS 255 (308)
Q Consensus 213 i~~~~~~~ipvia~GGI~~~~d~~k~l~~G-Ad~V~ig~~~l~~ 255 (308)
+++.+ ++|||++||| +++++.++++.| ||+|++||+++..
T Consensus 274 ik~~~--~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~iGR~~lan 314 (362)
T 4ab4_A 274 IKEAF--GGPYIVNERF-DKASANAALASGKADAVAFGVPFIAN 314 (362)
T ss_dssp HHHHH--CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHC
T ss_pred HHHHC--CCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHhC
Confidence 66666 7899999999 999999999988 9999999999864
No 63
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=99.34 E-value=1.4e-11 Score=135.84 Aligned_cols=191 Identities=13% Similarity=0.136 Sum_probs=127.3
Q ss_pred CCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCCCHHHHh-------ccC--CCCceEEeeecCCch---HH
Q 021739 11 SMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVS-------STG--PGIRFFQLYVTKHRN---VD 78 (308)
Q Consensus 11 ~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~~e~i~-------~~~--~~~~~~Ql~~~~d~~---~~ 78 (308)
..||+.|||++. .+ +..++.++.+.|....++.....+.+++. +.. ..+..+++.. .+++ +.
T Consensus 582 ~~PIi~a~M~~~-vs----~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~~vk~~~~~~~p~gvN~~~-~~p~~~~~~ 655 (2060)
T 2uva_G 582 VPPVMVAGMTPT-TV----PWDFVAATMNAGYHIELAGGGYYNAQKMSDAISKIEKAIPPGRGITVNLIY-VNPRAMGWQ 655 (2060)
T ss_dssp SCSEEECCCTTT-TC----SHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHHHHGGGSCTTCCEEEEEET-TCTTHHHHH
T ss_pred cceEEecCCCCc-cc----cHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHHHHHhhcccCCCeEecccc-cCcccchhH
Confidence 689999999853 14 44799999999988888433334444322 223 1366777763 3333 35
Q ss_pred HHHHHHHHHcCCcE--EEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHH
Q 021739 79 AQLVKRAERAGFKA--IALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKD 156 (308)
Q Consensus 79 ~~~~~~~~~~g~~~--i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 156 (308)
.++++.+.+.|++. +.++.+.|.. -+.
T Consensus 656 ~~~~~~~~~~gv~i~gv~~~~G~p~~---------------------------------------------------e~~ 684 (2060)
T 2uva_G 656 IPLLGRLRADGVPIEGLTIGAGVPSI---------------------------------------------------EVA 684 (2060)
T ss_dssp HHHHHHHHTTTCCEEEEEEESSCCCH---------------------------------------------------HHH
T ss_pred HHHHHHHHHcCCCcceEeecCCCCCH---------------------------------------------------HHH
Confidence 57788888889987 5554432210 012
Q ss_pred HHHHHHhcCCCEEEEecCCHHHHHHH----HHcCCcEEE---Eec--cccc-CC-CCCcchHHHHHHHHHHccCCCeEEE
Q 021739 157 VKWLQTITSLPILVKGVLTAEDASLA----IQYGAAGII---VSN--HGAR-QL-DYVPATVMALEEVVQAAKGRVPVFL 225 (308)
Q Consensus 157 i~~ir~~~~~Pv~vK~~~~~e~a~~~----~~~G~d~i~---v~~--~gg~-~~-~~~~~~~~~l~~i~~~~~~~ipvia 225 (308)
++.++ ..+++++ +.+.+..++..+ .++|+|+|+ +.+ .||+ .. +...+....+.++++.+ ++|||+
T Consensus 685 ~~~l~-~~gi~~i-~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g~~d~~~~~l~lv~~i~~~~--~ipvia 760 (2060)
T 2uva_G 685 NEYIQ-TLGIRHI-SFKPGSVDAIQQVINIAKANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRIRKCS--NIVLVA 760 (2060)
T ss_dssp HHHHH-HSCCSEE-EECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTSSSSCCSCCSHHHHHHHHHHHHTST--TEEEEE
T ss_pred HHHHH-HcCCeEE-EecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccCCCCCCcccccchHHHHHHHHHHHc--CCCEEE
Confidence 33343 3488887 555565665555 899999998 544 1222 11 11234566777777655 799999
Q ss_pred ecCCCCHHHHHHHH-----------HcCCCEEEEchHHHHhcccCCHH
Q 021739 226 DGGVRRGTDVFKAL-----------ALGASGVFVGRPVPFSLAVDGEA 262 (308)
Q Consensus 226 ~GGI~~~~d~~k~l-----------~~GAd~V~ig~~~l~~~~~~G~~ 262 (308)
.|||.+++|+.++| ++|||+|+||+.|+....+.-.+
T Consensus 761 aGGI~~g~~i~aaltg~ws~~~g~palGAdgV~~GT~f~~t~Ea~~s~ 808 (2060)
T 2uva_G 761 GSGFGGSEDTYPYLTGSWSTKFGYPPMPFDGCMFGSRMMTAKEAHTSK 808 (2060)
T ss_dssp ESSCCSHHHHHHHHHTCGGGTTTSCCCCCSCEEESGGGGGBTTSCCCH
T ss_pred eCCCCCHHHHHHHhcCcchhhcCCCCCCCCEEEEchhhhcCcCCCCCH
Confidence 99999999999999 99999999999999765444443
No 64
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.32 E-value=1.1e-10 Score=102.60 Aligned_cols=175 Identities=18% Similarity=0.066 Sum_probs=113.1
Q ss_pred CCCHHHHHHHHHHHHcCCceeecCCCCCCHHHHhccCCCCceEEe---eec----CCchHHHHHHHHHHHcCCcEEEEec
Q 021739 25 AHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQL---YVT----KHRNVDAQLVKRAERAGFKAIALTV 97 (308)
Q Consensus 25 ~~~~~~~~~a~~a~~~g~~~~~s~~~~~~~e~i~~~~~~~~~~Ql---~~~----~d~~~~~~~~~~~~~~g~~~i~i~~ 97 (308)
.++.--..+++++.+.|+...-. .+...++++.+...-|.+-+. |.+ .++ +.+.++.+.++|++.+.+..
T Consensus 33 ~~~~~~~~~A~a~~~~Ga~~i~~-~~~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~--~~~~i~~~~~aGad~I~l~~ 109 (229)
T 3q58_A 33 DKPEIVAAMAQAAASAGAVAVRI-EGIENLRTVRPHLSVPIIGIIKRDLTGSPVRITP--YLQDVDALAQAGADIIAFDA 109 (229)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEE-ESHHHHHHHGGGCCSCEEEECBCCCSSCCCCBSC--SHHHHHHHHHHTCSEEEEEC
T ss_pred CCcchHHHHHHHHHHCCCcEEEE-CCHHHHHHHHHhcCCCEEEEEeecCCCCceEeCc--cHHHHHHHHHcCCCEEEECc
Confidence 33444467999999999887432 221123334433322433222 111 111 12235556778999886653
Q ss_pred CCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhcCCCEEEEecCCHH
Q 021739 98 DTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAE 177 (308)
Q Consensus 98 ~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~~~Pv~vK~~~~~e 177 (308)
.. . .+|....+.++.+++. ++++++ .+.+.+
T Consensus 110 ~~--~---------------------------------------------~~p~~l~~~i~~~~~~-g~~v~~-~v~t~e 140 (229)
T 3q58_A 110 SF--R---------------------------------------------SRPVDIDSLLTRIRLH-GLLAMA-DCSTVN 140 (229)
T ss_dssp CS--S---------------------------------------------CCSSCHHHHHHHHHHT-TCEEEE-ECSSHH
T ss_pred cc--c---------------------------------------------CChHHHHHHHHHHHHC-CCEEEE-ecCCHH
Confidence 10 0 0222234567777764 677765 457899
Q ss_pred HHHHHHHcCCcEEEEecccccCC-CCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 021739 178 DASLAIQYGAAGIIVSNHGARQL-DYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 178 ~a~~~~~~G~d~i~v~~~gg~~~-~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
+++++.++|+|+|.+.++|.+.. ....++++.+.++++. ++|||++|||+|++|+.+++++|||+|++|+.++.
T Consensus 141 ea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~---~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsai~~ 215 (229)
T 3q58_A 141 EGISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHA---GCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITR 215 (229)
T ss_dssp HHHHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTT---TCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred HHHHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHc---CCCEEEECCCCCHHHHHHHHHcCCCEEEEchHhcC
Confidence 99999999999997655543221 1234577888877653 79999999999999999999999999999999875
No 65
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.31 E-value=2.1e-10 Score=100.89 Aligned_cols=96 Identities=16% Similarity=0.104 Sum_probs=75.4
Q ss_pred HHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCC-CCCcchHHHHHHHHHHccCCCeEEEecCCCCH
Q 021739 154 WKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQL-DYVPATVMALEEVVQAAKGRVPVFLDGGVRRG 232 (308)
Q Consensus 154 ~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~-~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~ 232 (308)
.+.++.+++. ++++++ .+.+.++++++.++|+|+|.+.+++.+.. ....++++.+.++++. ++|+|++|||+|+
T Consensus 119 ~~~i~~~~~~-g~~v~~-~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~---~ipvIA~GGI~t~ 193 (232)
T 3igs_A 119 EALLARIHHH-HLLTMA-DCSSVDDGLACQRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDA---GCRVIAEGRYNSP 193 (232)
T ss_dssp HHHHHHHHHT-TCEEEE-ECCSHHHHHHHHHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHT---TCCEEEESCCCSH
T ss_pred HHHHHHHHHC-CCEEEE-eCCCHHHHHHHHhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhc---CCcEEEECCCCCH
Confidence 4567777664 677765 45789999999999999997655543221 1234578888888754 7999999999999
Q ss_pred HHHHHHHHcCCCEEEEchHHHH
Q 021739 233 TDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 233 ~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
+|+.+++++|||+|++|+.++.
T Consensus 194 ~d~~~~~~~GadgV~VGsal~~ 215 (232)
T 3igs_A 194 ALAAEAIRYGAWAVTVGSAITR 215 (232)
T ss_dssp HHHHHHHHTTCSEEEECHHHHC
T ss_pred HHHHHHHHcCCCEEEEehHhcC
Confidence 9999999999999999999874
No 66
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=99.31 E-value=8.6e-11 Score=105.48 Aligned_cols=172 Identities=16% Similarity=0.180 Sum_probs=113.8
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhh----Hhhhhc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLAS----YVANQI 148 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 148 (308)
.|.+.+.++++.+.+.|++.|.+++ | |+.|. +| |+..|. ++....
T Consensus 31 P~~~~~~~~~~~l~~~GaD~iElGi--P------------fSDP~---------aD--------GpvIq~a~~rAL~~G~ 79 (271)
T 3nav_A 31 PNPEQSLAIMQTLIDAGADALELGM--P------------FSDPL---------AD--------GPTIQGANLRALAAKT 79 (271)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEEC--C------------CCCGG---------GC--------CSHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECC--C------------CCCCC---------CC--------CHHHHHHHHHHHHcCC
Confidence 4568899999999999999999886 5 33341 01 233333 222222
Q ss_pred ccccCHHHHHHHHHh-cCCCEEEEecCC-------HHHHHHHHHcCCcEEEEecc---------------cc--------
Q 021739 149 DRSLNWKDVKWLQTI-TSLPILVKGVLT-------AEDASLAIQYGAAGIIVSNH---------------GA-------- 197 (308)
Q Consensus 149 d~~~~~~~i~~ir~~-~~~Pv~vK~~~~-------~e~a~~~~~~G~d~i~v~~~---------------gg-------- 197 (308)
..+..++.++++|+. .++|+++....+ ...++.+.++|+|++.+..- |-
T Consensus 80 ~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap 159 (271)
T 3nav_A 80 TPDICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPP 159 (271)
T ss_dssp CHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECT
T ss_pred CHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECC
Confidence 333457889999987 799999876422 34689999999999887431 10
Q ss_pred -cC-------------------CC--CC-----cc-hHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 021739 198 -RQ-------------------LD--YV-----PA-TVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 249 (308)
Q Consensus 198 -~~-------------------~~--~~-----~~-~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig 249 (308)
+. .. .| +. ..+.+.++++.. ++|+++.+||++++++.+++..|||+|.+|
T Consensus 160 ~t~~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGIst~e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 160 TASDETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFD--APPALLGFGISEPAQVKQAIEAGAAGAISG 237 (271)
T ss_dssp TCCHHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHHTT--CCCEEECSSCCSHHHHHHHHHTTCSEEEES
T ss_pred CCCHHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 00 00 01 11 124456666554 799999999999999999999999999999
Q ss_pred hHHHHhcccC--CHHHHHHHHHHHHHHHHH
Q 021739 250 RPVPFSLAVD--GEAGVRKVLQMLRDEFEL 277 (308)
Q Consensus 250 ~~~l~~~~~~--G~~~v~~~i~~l~~~l~~ 277 (308)
++++..+... +.+...+.+..+.++|+.
T Consensus 238 SAiv~~i~~~~~~~~~~~~~~~~~~~~l~~ 267 (271)
T 3nav_A 238 SAVVKIIETHLDNPAKQLTELANFTQAMKK 267 (271)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccchHHHHHHHHHHHHHHHH
Confidence 9999865432 233333444555555553
No 67
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=99.27 E-value=2.1e-10 Score=102.79 Aligned_cols=172 Identities=16% Similarity=0.174 Sum_probs=113.1
Q ss_pred cCCc--hHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhh----Hhh
Q 021739 72 TKHR--NVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLAS----YVA 145 (308)
Q Consensus 72 ~~d~--~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~----~~~ 145 (308)
..|| +.+.++++.+++.|++.|.+++ | |+.|. . | |...|. ++.
T Consensus 26 aGdP~~~~~~~~~~~l~~~GaD~iElgi--P------------fSDP~------a---D--------Gp~Iq~a~~~AL~ 74 (267)
T 3vnd_A 26 IGDPSPELSLKIIQTLVDNGADALELGF--P------------FSDPL------A---D--------GPVIQGANLRSLA 74 (267)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCSSEEEEC--C------------CSCCT------T---C--------CHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECC--C------------CCCCC------C---C--------CHHHHHHHHHHHH
Confidence 4454 8899999999999999998875 5 34442 0 1 223333 222
Q ss_pred hhcccccCHHHHHHHHHh-cCCCEEEEecCC-------HHHHHHHHHcCCcEEEEecc---------------cc-----
Q 021739 146 NQIDRSLNWKDVKWLQTI-TSLPILVKGVLT-------AEDASLAIQYGAAGIIVSNH---------------GA----- 197 (308)
Q Consensus 146 ~~~d~~~~~~~i~~ir~~-~~~Pv~vK~~~~-------~e~a~~~~~~G~d~i~v~~~---------------gg----- 197 (308)
.....+..++.++++|+. .++|+++....+ ...++.+.++|+|++.+..- |-
T Consensus 75 ~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~l 154 (267)
T 3vnd_A 75 AGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFI 154 (267)
T ss_dssp TTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECE
T ss_pred cCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEE
Confidence 212223347889999988 799998876533 34689999999999988431 10
Q ss_pred ----cC-------------------CC--CC-----c-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEE
Q 021739 198 ----RQ-------------------LD--YV-----P-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGV 246 (308)
Q Consensus 198 ----~~-------------------~~--~~-----~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V 246 (308)
+. .. .| + ...+.+.++++.. ++||+..|||++++++.+++..|||+|
T Consensus 155 iaP~t~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~--~~pv~vGfGI~~~e~~~~~~~~gADgv 232 (267)
T 3vnd_A 155 APPNADADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFN--APPPLLGFGIAEPEQVRAAIKAGAAGA 232 (267)
T ss_dssp ECTTCCHHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTT--CCCEEECSSCCSHHHHHHHHHTTCSEE
T ss_pred ECCCCCHHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhc--CCCEEEECCcCCHHHHHHHHHcCCCEE
Confidence 00 00 01 1 1234456665443 699999999999999999999999999
Q ss_pred EEchHHHHhcccC--CHHHHHHHHHHHHHHHH
Q 021739 247 FVGRPVPFSLAVD--GEAGVRKVLQMLRDEFE 276 (308)
Q Consensus 247 ~ig~~~l~~~~~~--G~~~v~~~i~~l~~~l~ 276 (308)
.+|++++..+... ..+...+.+..+.++|+
T Consensus 233 VVGSaiv~~i~~~~~~~~~~~~~~~~~~~~l~ 264 (267)
T 3vnd_A 233 ISGSAVVKIIEAHQHDEATLLAKLAEFTTAMK 264 (267)
T ss_dssp EECHHHHHHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred EECHHHHHHHHHhccChHHHHHHHHHHHHHHH
Confidence 9999998865432 23333344455555555
No 68
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.24 E-value=1.7e-10 Score=101.13 Aligned_cols=95 Identities=22% Similarity=0.246 Sum_probs=74.9
Q ss_pred cCHHHHHHHHHhcCCCEEEEec-----CCHH----HHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCe
Q 021739 152 LNWKDVKWLQTITSLPILVKGV-----LTAE----DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVP 222 (308)
Q Consensus 152 ~~~~~i~~ir~~~~~Pv~vK~~-----~~~e----~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 222 (308)
...+.++++++.++ |+++|.+ .+.+ .++.+.++|+|+|.. ++|. ..+..+++.+..+++.+..++|
T Consensus 103 ~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~t-stg~---~~gga~~~~i~~v~~~v~~~ip 177 (225)
T 1mzh_A 103 FVVEELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKT-STGF---APRGTTLEEVRLIKSSAKGRIK 177 (225)
T ss_dssp HHHHHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEEC-CCSC---SSSCCCHHHHHHHHHHHTTSSE
T ss_pred HHHHHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEE-CCCC---CCCCCCHHHHHHHHHHhCCCCc
Confidence 34567999999888 9999983 3443 378889999999954 3321 1233578888888887766899
Q ss_pred EEEecCCCCHHHHHHHHHcCCCEEEEchH
Q 021739 223 VFLDGGVRRGTDVFKALALGASGVFVGRP 251 (308)
Q Consensus 223 via~GGI~~~~d~~k~l~~GAd~V~ig~~ 251 (308)
|+++|||+|++|+.+++++|||.|++++.
T Consensus 178 Via~GGI~t~~da~~~l~aGA~~iG~s~~ 206 (225)
T 1mzh_A 178 VKASGGIRDLETAISMIEAGADRIGTSSG 206 (225)
T ss_dssp EEEESSCCSHHHHHHHHHTTCSEEEESCH
T ss_pred EEEECCCCCHHHHHHHHHhCchHHHHccH
Confidence 99999999999999999999999888874
No 69
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=99.23 E-value=1.3e-09 Score=97.70 Aligned_cols=118 Identities=19% Similarity=0.150 Sum_probs=78.5
Q ss_pred HHHHHHHHhc--CCCEEEEecCCHHHHHHHHHcCCcEEEEecc-cccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCC
Q 021739 155 KDVKWLQTIT--SLPILVKGVLTAEDASLAIQYGAAGIIVSNH-GARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR 231 (308)
Q Consensus 155 ~~i~~ir~~~--~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~-gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~ 231 (308)
+.++.+++.. ++.++.-...+.+.++++.+.|+|+|...+. .|+. .+...++.+.++++.. ++||++.|||++
T Consensus 114 ~~~~~a~~~~~~g~~vi~~~~~~~~~a~~~~~~gad~v~~~~~~~Gt~--~~~~~~~~l~~i~~~~--~iPviv~gGI~t 189 (264)
T 1xm3_A 114 ETLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAIMPGASPIGSG--QGILNPLNLSFIIEQA--KVPVIVDAGIGS 189 (264)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHTCSCBEECSSSTTCC--CCCSCHHHHHHHHHHC--SSCBEEESCCCS
T ss_pred HHHHHHHHHHCCCeEEEEEcCCCHHHHHHHHHhCCCEEEECCcccCCC--CCCCCHHHHHHHHhcC--CCCEEEEeCCCC
Confidence 4455555543 5555544456788999999999999933121 1221 1223466777777654 799999999999
Q ss_pred HHHHHHHHHcCCCEEEEchHHHHhcccCCHHHHHHHHHHHHHHHHHH
Q 021739 232 GTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELT 278 (308)
Q Consensus 232 ~~d~~k~l~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~l~~~ 278 (308)
++|+.+++++|||+|.+|++++... .-.+.++++.+.+.+....+
T Consensus 190 ~eda~~~~~~GAdgViVGSAi~~a~--dp~~~~~~l~~~v~~~~~~~ 234 (264)
T 1xm3_A 190 PKDAAYAMELGADGVLLNTAVSGAD--DPVKMARAMKLAVEAGRLSY 234 (264)
T ss_dssp HHHHHHHHHTTCSEEEESHHHHTSS--SHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcHHHhCCC--CHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988641 11233444444444443333
No 70
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.19 E-value=9.4e-10 Score=95.72 Aligned_cols=98 Identities=21% Similarity=0.248 Sum_probs=77.4
Q ss_pred HHHHHHHHHhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCC--CC--CcchHHHHHHHHHHccCCCeEEEecC
Q 021739 154 WKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQL--DY--VPATVMALEEVVQAAKGRVPVFLDGG 228 (308)
Q Consensus 154 ~~~i~~ir~~~-~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~--~~--~~~~~~~l~~i~~~~~~~ipvia~GG 228 (308)
.+.++++++.+ +.++++ ...+++++..+.+.|+|+|.+++++.+.. +. ..+.++.+.++++.+ ++||+++||
T Consensus 107 ~~~i~~~~~~~~~~~v~~-~~~t~~e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~--~ipvia~GG 183 (223)
T 1y0e_A 107 DELVSYIRTHAPNVEIMA-DIATVEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSV--DAKVIAEGN 183 (223)
T ss_dssp HHHHHHHHHHCTTSEEEE-ECSSHHHHHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHC--CSEEEEESS
T ss_pred HHHHHHHHHhCCCceEEe-cCCCHHHHHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhC--CCCEEEecC
Confidence 46788888876 566665 45788899999999999998766543321 11 234567778887766 799999999
Q ss_pred CCCHHHHHHHHHcCCCEEEEchHHHH
Q 021739 229 VRRGTDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 229 I~~~~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
|++++|+.+++++|||+|++||+++.
T Consensus 184 I~~~~~~~~~~~~Gad~v~vG~al~~ 209 (223)
T 1y0e_A 184 VITPDMYKRVMDLGVHCSVVGGAITR 209 (223)
T ss_dssp CCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred CCCHHHHHHHHHcCCCEEEEChHHcC
Confidence 99999999999999999999999653
No 71
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=99.11 E-value=3.2e-10 Score=107.19 Aligned_cols=152 Identities=18% Similarity=0.098 Sum_probs=94.2
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHH
Q 021739 78 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 157 (308)
Q Consensus 78 ~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 157 (308)
+.+..++++++|+++|+|+..| |+-. +.|.-| ..+.| -+ .. | ++.. ....+..+++
T Consensus 170 ~~~aa~~a~~aGfdgveih~~~---GYLl----~QFLsp-~~N~r-~D--------~Y-G---Gs~e---nr~r~~~ei~ 225 (407)
T 3tjl_A 170 YTNAAQKAMDAGFDYIELHAAH---GYLL----DQFLQP-CTNQR-TD--------EY-G---GSIE---NRARLILELI 225 (407)
T ss_dssp HHHHHHHHHHTTCSEEEEECCT---TSHH----HHHHST-TTCCC-CS--------TT-S---SSHH---HHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEECCcc---chHH----HHhcCc-ccccc-CC--------cC-C---CChh---hChHHHHHHH
Confidence 4445566788999999999887 1110 111111 00100 00 11 1 1111 2455678999
Q ss_pred HHHHHhcC-CCEEEEecC-----------C--------HHHHHHH---HHcC--CcEEEEeccc-ccCCCCCcc-hHHHH
Q 021739 158 KWLQTITS-LPILVKGVL-----------T--------AEDASLA---IQYG--AAGIIVSNHG-ARQLDYVPA-TVMAL 210 (308)
Q Consensus 158 ~~ir~~~~-~Pv~vK~~~-----------~--------~e~a~~~---~~~G--~d~i~v~~~g-g~~~~~~~~-~~~~l 210 (308)
+++|+.++ .||.+|+.. + .+.++.+ .+.| +|+|.++... ..+.+..+. .+..+
T Consensus 226 ~av~~~~~~~~v~~r~~~~~~~~g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~~~~~~~~~~~~~ 305 (407)
T 3tjl_A 226 DHLSTIVGADKIGIRISPWATFQNMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSGNVDVSEEDQAGDN 305 (407)
T ss_dssp HHHHHHHCGGGEEEEECTTCCGGGCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEETTEECCGGGCCCCS
T ss_pred HHHHHHhCCCeEEEEECcccccCCCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCCCCcCCccchhHHH
Confidence 99999874 489999873 2 1236777 7889 9999997421 111111110 11233
Q ss_pred HHHHHHccCCCeEEEecCCCCHHHHHHHHHc---C-CCEEEEchHHHHh
Q 021739 211 EEVVQAAKGRVPVFLDGGVRRGTDVFKALAL---G-ASGVFVGRPVPFS 255 (308)
Q Consensus 211 ~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~---G-Ad~V~ig~~~l~~ 255 (308)
..+++.. ++|||++|||.+.+|+.+++.. | ||+|++||+++..
T Consensus 306 ~~ir~~~--~~PvI~~Ggi~~~~dA~~~i~~~~~g~aDlVa~GR~~iaN 352 (407)
T 3tjl_A 306 EFVSKIW--KGVILKAGNYSYDAPEFKTLKEDIADKRTLVGFSRYFTSN 352 (407)
T ss_dssp HHHHHHC--CSEEEEESCGGGGTTTTHHHHHHHTTSSEEEECSHHHHHC
T ss_pred HHHHHHh--CCCEEecCCCCCHHHHHHHHHhhccCCCeEEEeChhhhhC
Confidence 4555555 6899999999999988887776 5 9999999999864
No 72
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=99.11 E-value=1e-09 Score=103.19 Aligned_cols=100 Identities=7% Similarity=-0.144 Sum_probs=76.7
Q ss_pred ccccCHHHHHHHHHhcC-CCEEEEecCC---------------HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHH
Q 021739 149 DRSLNWKDVKWLQTITS-LPILVKGVLT---------------AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEE 212 (308)
Q Consensus 149 d~~~~~~~i~~ir~~~~-~Pv~vK~~~~---------------~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~ 212 (308)
...+..+.++++|+.++ -||.+|+... .+.++.+.++|+|+|.+++.+... ...+. . +.+
T Consensus 226 R~r~~~eiv~aVr~avg~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~--~~~~~-~-~~~ 301 (379)
T 3aty_A 226 RCQLIYDVTKSVCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVN--QQIGD-V-VAW 301 (379)
T ss_dssp HHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTS--CCCCC-H-HHH
T ss_pred hHHHHHHHHHHHHHhcCCCeEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCC--CCccH-H-HHH
Confidence 45567899999999874 4899998642 134678889999999998743111 11122 4 666
Q ss_pred HHHHccCCCeEEEecCCCCHHHHHHHHHcC-CCEEEEchHHHHh
Q 021739 213 VVQAAKGRVPVFLDGGVRRGTDVFKALALG-ASGVFVGRPVPFS 255 (308)
Q Consensus 213 i~~~~~~~ipvia~GGI~~~~d~~k~l~~G-Ad~V~ig~~~l~~ 255 (308)
+++.+ ++|||++||| +++++.++++.| ||+|++||+++..
T Consensus 302 ir~~~--~iPvi~~G~i-t~~~a~~~l~~g~aD~V~igR~~l~~ 342 (379)
T 3aty_A 302 VRGSY--SGVKISNLRY-DFEEADQQIREGKVDAVAFGAKFIAN 342 (379)
T ss_dssp HHTTC--CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHC
T ss_pred HHHHC--CCcEEEECCC-CHHHHHHHHHcCCCeEEEecHHHHhC
Confidence 66665 7999999999 999999999998 9999999999974
No 73
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=99.10 E-value=2e-09 Score=96.63 Aligned_cols=173 Identities=13% Similarity=0.121 Sum_probs=109.9
Q ss_pred cCCc--hHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhh----hHhh
Q 021739 72 TKHR--NVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLA----SYVA 145 (308)
Q Consensus 72 ~~d~--~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~ 145 (308)
..|+ +.+.+.++.+++.|++.|.+++ |.. .|. . | |...+ .++.
T Consensus 25 ~gdp~~~~~~~~~~~l~~~GaD~ieig~--P~s------------dp~-~--------D--------G~~i~~a~~~al~ 73 (268)
T 1qop_A 25 LGDPGIEQSLKIIDTLIDAGADALELGV--PFS------------DPL-A--------D--------GPTIQNANLRAFA 73 (268)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCSSEEEEC--CCS------------CCT-T--------C--------CHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEECC--CCC------------Ccc-C--------C--------CHHHHHHHHHHHH
Confidence 4455 7888899999999999988865 532 221 0 0 11112 1222
Q ss_pred hhcccccCHHHHHHHHHh-cCCCEEEEecCC-------HHHHHHHHHcCCcEEEEeccc--------------c------
Q 021739 146 NQIDRSLNWKDVKWLQTI-TSLPILVKGVLT-------AEDASLAIQYGAAGIIVSNHG--------------A------ 197 (308)
Q Consensus 146 ~~~d~~~~~~~i~~ir~~-~~~Pv~vK~~~~-------~e~a~~~~~~G~d~i~v~~~g--------------g------ 197 (308)
.........+.++++|+. +++||++-...+ ..+++.+.++|+|++++..-. |
T Consensus 74 ~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l 153 (268)
T 1qop_A 74 AGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFI 153 (268)
T ss_dssp TTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECE
T ss_pred cCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEE
Confidence 111223346789999998 799987633212 367889999999999885311 0
Q ss_pred ----cC-------------------C--CCC------cchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEE
Q 021739 198 ----RQ-------------------L--DYV------PATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGV 246 (308)
Q Consensus 198 ----~~-------------------~--~~~------~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V 246 (308)
+. . ..| ++..+.+.++++.. ++||++.|||++++++.+++..|||.|
T Consensus 154 ~~p~t~~~~i~~i~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~--~~pi~vggGI~t~e~~~~~~~agAD~v 231 (268)
T 1qop_A 154 CPPNADDDLLRQVASYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYH--AAPALQGFGISSPEQVSAAVRAGAAGA 231 (268)
T ss_dssp ECTTCCHHHHHHHHHHCCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTT--CCCEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred ECCCCCHHHHHHHHhhCCCcEEEEecCCcCCCccCCCchHHHHHHHHHhcc--CCcEEEECCCCCHHHHHHHHHcCCCEE
Confidence 00 0 001 11246667776654 799999999999999999999999999
Q ss_pred EEchHHHHhcccC--CHHHHHHHHHHHHHHHHH
Q 021739 247 FVGRPVPFSLAVD--GEAGVRKVLQMLRDEFEL 277 (308)
Q Consensus 247 ~ig~~~l~~~~~~--G~~~v~~~i~~l~~~l~~ 277 (308)
.+||.++...... .++...+.+..+.++++.
T Consensus 232 VVGSai~~~~~~~~~~~~~~~~~~~~~~~~l~~ 264 (268)
T 1qop_A 232 ISGSAIVKIIEKNLASPKQMLAELRSFVSAMKA 264 (268)
T ss_dssp EECHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred EEChHHhhhHhhcccCchHHHHHHHHHHHHHHH
Confidence 9999998864321 222222344555555543
No 74
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=99.07 E-value=1.8e-08 Score=90.03 Aligned_cols=170 Identities=16% Similarity=0.183 Sum_probs=106.7
Q ss_pred chHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhh----Hhhhhccc
Q 021739 75 RNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLAS----YVANQIDR 150 (308)
Q Consensus 75 ~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~d~ 150 (308)
.+.+.+.++.+.+.|++.|.+++ |.. .|. . + +...+. .+....++
T Consensus 31 ~~~~~~~~~~l~~~Gad~ielg~--p~~------------dp~-~-----d-----------g~~i~~a~~~al~~g~~~ 79 (262)
T 1rd5_A 31 LATTAEALRLLDGCGADVIELGV--PCS------------DPY-I-----D-----------GPIIQASVARALASGTTM 79 (262)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEEC--CCS------------CCT-T-----S-----------CHHHHHHHHHHHTTTCCH
T ss_pred HHHHHHHHHHHHHcCCCEEEECC--CCC------------Ccc-c-----C-----------CHHHHHHHHHHHHcCCCH
Confidence 37778888999999999998875 321 110 0 0 111121 11111233
Q ss_pred ccCHHHHHHHHHhcCCCEEEEecCCHHH---HHHHHHcCCcEEEEeccc--------------c----------cC----
Q 021739 151 SLNWKDVKWLQTITSLPILVKGVLTAED---ASLAIQYGAAGIIVSNHG--------------A----------RQ---- 199 (308)
Q Consensus 151 ~~~~~~i~~ir~~~~~Pv~vK~~~~~e~---a~~~~~~G~d~i~v~~~g--------------g----------~~---- 199 (308)
+...+.++++|+.+++|+++....++.. .+.+.++|+|++++.... | +.
T Consensus 80 ~~~~~~i~~ir~~~~~Pv~~m~~~~~~~~~~~~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~ 159 (262)
T 1rd5_A 80 DAVLEMLREVTPELSCPVVLLSYYKPIMFRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRM 159 (262)
T ss_dssp HHHHHHHHHHGGGCSSCEEEECCSHHHHSCCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHH
T ss_pred HHHHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHHHH
Confidence 4456789999988899998864333321 344888999998875311 0 00
Q ss_pred ---------------CC--CC------cchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHhc
Q 021739 200 ---------------LD--YV------PATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSL 256 (308)
Q Consensus 200 ---------------~~--~~------~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~~ 256 (308)
.. .+ +...+.+.++++.. ++||++.|||++++++.+++.+|||.|.+|+.++...
T Consensus 160 ~~~~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~--~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai~~~~ 237 (262)
T 1rd5_A 160 KEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVT--NKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVRQL 237 (262)
T ss_dssp HHHHHHCCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHHH
T ss_pred HHHHhcCCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhhc--CCeEEEECCcCCHHHHHHHHHcCCCEEEEChHHHhHH
Confidence 00 01 11234566666654 7999999999999999999999999999999998865
Q ss_pred cc-CCHHHHHHHHHHHHHHHHH
Q 021739 257 AV-DGEAGVRKVLQMLRDEFEL 277 (308)
Q Consensus 257 ~~-~G~~~v~~~i~~l~~~l~~ 277 (308)
.. ..++...+.+..+.++|+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~ 259 (262)
T 1rd5_A 238 GEAASPKQGLRRLEEYARGMKN 259 (262)
T ss_dssp HSSSSHHHHHHHHHHHHHHHHH
T ss_pred HhccChhHHHHHHHHHHHHHHH
Confidence 32 2233223345555555554
No 75
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=99.03 E-value=9.6e-10 Score=97.40 Aligned_cols=161 Identities=14% Similarity=0.146 Sum_probs=104.0
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcc--
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQID-- 149 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-- 149 (308)
+.|.+.+.++++.+.+.|++.|.+++ | |+.|. +| |+..|.+......
T Consensus 24 ~P~~~~t~~~~~~l~~~GaD~iElGi--P------------fSDP~---------aD--------GpvIq~a~~rAL~~g 72 (252)
T 3tha_A 24 YPNLQTSEAFLQRLDQSPIDILELGV--A------------YSDPI---------AD--------GEIIADAAKIALDQG 72 (252)
T ss_dssp SSCHHHHHHHHHTGGGSSCSEEEEEC--C------------CSCCC---------SC--------CCHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECC--C------------CCCCC---------CC--------cHHHHHHHHHHHHCC
Confidence 34668899999999999999999986 5 44452 11 3444543333333
Q ss_pred --cccCHHHHHHHHHhcCCCEEEEecCC-------HHHHHHHHHcCCcEEEEec---------------ccc--------
Q 021739 150 --RSLNWKDVKWLQTITSLPILVKGVLT-------AEDASLAIQYGAAGIIVSN---------------HGA-------- 197 (308)
Q Consensus 150 --~~~~~~~i~~ir~~~~~Pv~vK~~~~-------~e~a~~~~~~G~d~i~v~~---------------~gg-------- 197 (308)
.+..++.++++|+. +|+++-...+ ...++.+.++|+|++.+-. +|-
T Consensus 73 ~~~~~~~~~~~~~r~~--~Pivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP 150 (252)
T 3tha_A 73 VDIHSVFELLARIKTK--KALVFMVYYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSV 150 (252)
T ss_dssp CCHHHHHHHHHHCCCS--SEEEEECCHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEET
T ss_pred CCHHHHHHHHHHHhcC--CCEEEEeccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCC
Confidence 33346667777654 7998876533 2468899999999998732 110
Q ss_pred -c-------------C------CC--CCcc-h-----HHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 021739 198 -R-------------Q------LD--YVPA-T-----VMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 249 (308)
Q Consensus 198 -~-------------~------~~--~~~~-~-----~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig 249 (308)
+ . .. .|.. . .+.+.++++.. ++|++..+||++++++.++.. +||+|.+|
T Consensus 151 ~t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGIst~e~a~~~~~-~ADGVIVG 227 (252)
T 3tha_A 151 TTPKERVKKLVKHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFT--NLPIFVGFGIQNNQDVKRMRK-VADGVIVG 227 (252)
T ss_dssp TSCHHHHHHHHTTCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHTT-TSSEEEEC
T ss_pred CCcHHHHHHHHHhCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHHhc--CCcEEEEcCcCCHHHHHHHHh-cCCEEEEC
Confidence 0 0 00 1111 1 12344444432 699999999999999987655 79999999
Q ss_pred hHHHHhcccCCHHHHHHHH
Q 021739 250 RPVPFSLAVDGEAGVRKVL 268 (308)
Q Consensus 250 ~~~l~~~~~~G~~~v~~~i 268 (308)
++++..+...+.+...+.+
T Consensus 228 SAiVk~i~~~~~~~~~~~~ 246 (252)
T 3tha_A 228 TSIVKCFKQGNLDIIMKDI 246 (252)
T ss_dssp HHHHHHTTSSCHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHH
Confidence 9999877555554333333
No 76
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=99.02 E-value=7.7e-09 Score=88.79 Aligned_cols=87 Identities=16% Similarity=0.126 Sum_probs=53.2
Q ss_pred CHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 021739 175 TAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 175 ~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
|++++..+.+.|+|.|.+.... ......+.++++.+. ++|++++|||. .+++.+++.+|||+|.+||.++.
T Consensus 113 t~~e~~~a~~~Gad~vk~~~~~-------~~g~~~~~~l~~~~~-~~pvia~GGI~-~~~~~~~~~~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 113 TPTELVKAMKLGHTILKLFPGE-------VVGPQFVKAMKGPFP-NVKFVPTGGVN-LDNVCEWFKAGVLAVGVGSALVK 183 (205)
T ss_dssp SHHHHHHHHHTTCCEEEETTHH-------HHHHHHHHHHHTTCT-TCEEEEBSSCC-TTTHHHHHHHTCSCEEECHHHHC
T ss_pred CHHHHHHHHHcCCCEEEEcCcc-------ccCHHHHHHHHHhCC-CCcEEEcCCCC-HHHHHHHHHCCCCEEEECccccC
Confidence 4445555555555555432110 012334455544332 79999999996 78999999999999999999875
Q ss_pred hcccCCHHHHHHHHHHHHHH
Q 021739 255 SLAVDGEAGVRKVLQMLRDE 274 (308)
Q Consensus 255 ~~~~~G~~~v~~~i~~l~~~ 274 (308)
...+...+..+.+++.
T Consensus 184 ----~d~~~~~~~~~~~~~~ 199 (205)
T 1wa3_A 184 ----GTPDEVREKAKAFVEK 199 (205)
T ss_dssp ----SCHHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHHH
Confidence 2333334444444443
No 77
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=99.01 E-value=1.9e-08 Score=89.96 Aligned_cols=165 Identities=16% Similarity=0.149 Sum_probs=104.6
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhH----hhhhc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASY----VANQI 148 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 148 (308)
.+.+...++++.+.+.|++.|.+++ |.. .|.. .+...+.. +....
T Consensus 28 p~~~~~~~~~~~l~~~G~D~IElG~--P~s------------dP~a-----------------dgp~i~~a~~~al~~G~ 76 (262)
T 2ekc_A 28 PDYETSLKAFKEVLKNGTDILEIGF--PFS------------DPVA-----------------DGPTIQVAHEVALKNGI 76 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEEC--CCS------------CCTT-----------------SCHHHHHHHHHHHHTTC
T ss_pred CChHHHHHHHHHHHHcCCCEEEECC--CCC------------Cccc-----------------ccHHHHHHHHHHHHcCC
Confidence 3556788889999999999999875 532 2210 01222322 22112
Q ss_pred ccccCHHHHHHHHHhc-CCCEEEEecCC-------HHHHHHHHHcCCcEEEEecc---------------cc--------
Q 021739 149 DRSLNWKDVKWLQTIT-SLPILVKGVLT-------AEDASLAIQYGAAGIIVSNH---------------GA-------- 197 (308)
Q Consensus 149 d~~~~~~~i~~ir~~~-~~Pv~vK~~~~-------~e~a~~~~~~G~d~i~v~~~---------------gg-------- 197 (308)
..+..++.++++|+.+ ++|+++-...+ ..+++.+.++|+|++.+..- |-
T Consensus 77 ~~~~~~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~p 156 (262)
T 2ekc_A 77 RFEDVLELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAP 156 (262)
T ss_dssp CHHHHHHHHHHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEECT
T ss_pred CHHHHHHHHHHHHhhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCC
Confidence 2233467899999988 89998842222 35678899999999987431 10
Q ss_pred -cC-------------------CC--CCc------c-hHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEE
Q 021739 198 -RQ-------------------LD--YVP------A-TVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFV 248 (308)
Q Consensus 198 -~~-------------------~~--~~~------~-~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~i 248 (308)
+. .. .|. . ..+.+.++++.. ++||+..+||++++++.+ +..|||+|.+
T Consensus 157 ~t~~~rl~~ia~~a~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~--~~pv~vG~GI~t~e~~~~-~~~gADgvIV 233 (262)
T 2ekc_A 157 TSTRKRIKLICEAADEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELC--DKPVVVGFGVSKKEHARE-IGSFADGVVV 233 (262)
T ss_dssp TCCHHHHHHHHHHCSSCEEEESSCC---------CHHHHHHHHHHHHHC--CSCEEEESSCCSHHHHHH-HHTTSSEEEE
T ss_pred CCCHHHHHHHHHhCCCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhc--CCCEEEeCCCCCHHHHHH-HHcCCCEEEE
Confidence 00 00 000 1 124556666554 799999999999999999 8889999999
Q ss_pred chHHHHhcccCCHHHHHHHHHHH
Q 021739 249 GRPVPFSLAVDGEAGVRKVLQML 271 (308)
Q Consensus 249 g~~~l~~~~~~G~~~v~~~i~~l 271 (308)
||.+.........+.+.++++.+
T Consensus 234 GSai~~~~~~~~~~~~~~~~~~~ 256 (262)
T 2ekc_A 234 GSALVKLAGQKKIEDLGNLVKEL 256 (262)
T ss_dssp CHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHhhhhhhhHHHHHHHHHHH
Confidence 99999864322333444433333
No 78
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=99.00 E-value=1.3e-09 Score=96.65 Aligned_cols=135 Identities=24% Similarity=0.272 Sum_probs=96.4
Q ss_pred HHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHH
Q 021739 80 QLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKW 159 (308)
Q Consensus 80 ~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ 159 (308)
+..+.++++|+.++.+...||.. +|... ++ ..+ -..+.|++
T Consensus 22 eqa~iae~aGa~av~~l~~~p~d------~r~~g----Gv---------------------~Rm--------~dp~~I~~ 62 (291)
T 3o07_A 22 EQAKIAEKSGACAVMALESIPAD------MRKSG----KV---------------------CRM--------SDPKMIKD 62 (291)
T ss_dssp HHHHHHHHHTCSEEEECSSCHHH------HHTTT----CC---------------------CCC--------CCHHHHHH
T ss_pred HHHHHHHHhCchhhhhccCCCch------hhhcC----Cc---------------------ccc--------CCHHHHHH
Confidence 45677888999999999999853 32000 00 000 12478999
Q ss_pred HHHhcCCCEEEEec-CCHHHHHHHHHcCCcEEEEeccc--------------c-------------------------cC
Q 021739 160 LQTITSLPILVKGV-LTAEDASLAIQYGAAGIIVSNHG--------------A-------------------------RQ 199 (308)
Q Consensus 160 ir~~~~~Pv~vK~~-~~~e~a~~~~~~G~d~i~v~~~g--------------g-------------------------~~ 199 (308)
|++.+++||+.|.. ....+++.+.++|+|+|.-+..- + +.
T Consensus 63 I~~aVsIPVm~k~righ~~EAqilea~GaD~IDesevltpad~~~~I~k~~f~vpfv~~~~~l~EAlrri~eGA~mIrTt 142 (291)
T 3o07_A 63 IMNSVSIPVMAKVRIGHFVEAQIIEALEVDYIDESEVLTPADWTHHIEKDKFKVPFVCGAKDLGEALRRINEGAAMIRTK 142 (291)
T ss_dssp HHTTCSSCEEEEEETTCHHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEEC
T ss_pred HHHhCCCCeEEEEecCcHHHHHHHHHcCCCEEecccCCCHHHHHHHhhhhcCCCcEEeeCCCHHHHHHHHHCCCCEEEec
Confidence 99999999999986 45788899999999988765310 0 00
Q ss_pred ---------------------------C-CC---------CcchHHHHHHHHHHccCCCeE--EEecCCCCHHHHHHHHH
Q 021739 200 ---------------------------L-DY---------VPATVMALEEVVQAAKGRVPV--FLDGGVRRGTDVFKALA 240 (308)
Q Consensus 200 ---------------------------~-~~---------~~~~~~~l~~i~~~~~~~ipv--ia~GGI~~~~d~~k~l~ 240 (308)
+ .. ..++|+.+.++++.. ++|| |++|||.|++|+.+++.
T Consensus 143 ge~gtg~v~~av~h~r~~~~~i~~l~g~~t~~el~~~a~~~~ad~elI~~Ike~~--~IPVV~IAnGGI~TpedA~~~le 220 (291)
T 3o07_A 143 GEAGTGDVSEAVKHIRRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEKG--KLPVVNFAAGGVATPADAALLMQ 220 (291)
T ss_dssp CCTTSCCTHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHHT--SCSSCEEBCSSCCSHHHHHHHHH
T ss_pred CcCCCccHHHHHHHHHHHHHHHHHHHcCCCHHHhhhcccccCCCHHHHHHHHHcc--CCCEEEecCCCCCCHHHHHHHHH
Confidence 0 00 023456677776664 6888 56999999999999999
Q ss_pred cCCCEEEEchHHHHh
Q 021739 241 LGASGVFVGRPVPFS 255 (308)
Q Consensus 241 ~GAd~V~ig~~~l~~ 255 (308)
+|||+|++||.++.+
T Consensus 221 ~GaDGVmVGrAI~~s 235 (291)
T 3o07_A 221 LGCDGVFVGSGIFKS 235 (291)
T ss_dssp TTCSCEEECGGGGGS
T ss_pred hCCCEEEEchHHhCC
Confidence 999999999998863
No 79
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=99.00 E-value=1.2e-08 Score=95.18 Aligned_cols=151 Identities=13% Similarity=0.056 Sum_probs=90.9
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHH
Q 021739 78 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 157 (308)
Q Consensus 78 ~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 157 (308)
+.+..++++++|||+|.|+..+ |+-. +.|.-| ..+.|+ + +..|+ . +.-..+..|++
T Consensus 154 F~~AA~rA~~AGFDgVEIH~ah---GYLl----~QFLSp-~tN~Rt-D--------eYGGS----~---eNR~Rf~~Eii 209 (358)
T 4a3u_A 154 YEKAARHALKAGFDGVQIHAAN---GYLI----DEFIRD-STNHRH-D--------EYGGA----V---ENRIRLLKDVT 209 (358)
T ss_dssp HHHHHHHHHHTTCSEEEEEECT---TSHH----HHHHST-TTCCCC-S--------TTSSS----H---HHHTHHHHHHH
T ss_pred HHHHHHHHHHcCCCeEeecccC---CCcH----Hhceec-ccCCee-C--------CCCCC----H---HHHHHHHHHHH
Confidence 4455677889999999999642 3221 223222 111110 0 11111 1 01234567899
Q ss_pred HHHHHhc-CCCEEEEecCC-----------H----HHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCC
Q 021739 158 KWLQTIT-SLPILVKGVLT-----------A----EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRV 221 (308)
Q Consensus 158 ~~ir~~~-~~Pv~vK~~~~-----------~----e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~i 221 (308)
++||+.+ +-+|.+|+..+ . ..++.+.+.|++++.++...-..............++++.. +.
T Consensus 210 ~avr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~ik~~~--~~ 287 (358)
T 4a3u_A 210 ERVIATIGKERTAVRLSPNGEIQGTVDSHPEQVFIPAAKMLSDLDIAFLGMREGAVDGTFGKTDQPKLSPEIRKVF--KP 287 (358)
T ss_dssp HHHHHHHCGGGEEEEECCSSCBTTBCCSSTHHHHHHHHHHHHHHTCSEEEEECCBTTCSSSBCSSCCCHHHHHHHC--CS
T ss_pred HHHHHHcCccceEEEeccCcccCCCcccchHHHHHHHHHhhhccCccccccccccccCcccccccHHHHHHHHHhc--CC
Confidence 9999987 35688887521 1 23567788999999987543211111000111223444444 45
Q ss_pred eEEEecCCCCHHHHHHHHHcC-CCEEEEchHHHHh
Q 021739 222 PVFLDGGVRRGTDVFKALALG-ASGVFVGRPVPFS 255 (308)
Q Consensus 222 pvia~GGI~~~~d~~k~l~~G-Ad~V~ig~~~l~~ 255 (308)
|++ .||+.+++++.++|+.| ||+|++||+++..
T Consensus 288 ~v~-~~g~~~~~~ae~~l~~G~aD~V~~gR~~lad 321 (358)
T 4a3u_A 288 PLV-LNQDYTFETAQAALDSGVADAISFGRPFIGN 321 (358)
T ss_dssp CEE-EESSCCHHHHHHHHHHTSCSEEEESHHHHHC
T ss_pred cEE-EeCCCCHHHHHHHHHcCCceEeHhhHHHHhC
Confidence 665 57889999999999999 9999999999974
No 80
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=98.99 E-value=2.8e-09 Score=94.28 Aligned_cols=121 Identities=21% Similarity=0.206 Sum_probs=84.2
Q ss_pred cCHHHHHHHHHhcCCCEEEEecCC-------HHHHHHHHHcCCcEEEEeccc--------------c----------cC-
Q 021739 152 LNWKDVKWLQTITSLPILVKGVLT-------AEDASLAIQYGAAGIIVSNHG--------------A----------RQ- 199 (308)
Q Consensus 152 ~~~~~i~~ir~~~~~Pv~vK~~~~-------~e~a~~~~~~G~d~i~v~~~g--------------g----------~~- 199 (308)
...+.++++|+.+++||.+....+ .+.++.+.++|+|+|++..-. | +.
T Consensus 67 ~~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~ 146 (248)
T 1geq_A 67 EAFWIVKEFRRHSSTPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPD 146 (248)
T ss_dssp HHHHHHHHHHTTCCCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCCH
T ss_pred HHHHHHHHHHhhCCCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCHH
Confidence 346889999998899999887534 367899999999999986310 0 00
Q ss_pred ---------CC------------CC-----cchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHH
Q 021739 200 ---------LD------------YV-----PATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVP 253 (308)
Q Consensus 200 ---------~~------------~~-----~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l 253 (308)
.+ +. +...+.+.++++.+ ++||+++|||++++|+.+++.+|||.|.+|+.++
T Consensus 147 e~~~~~~~~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~--~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsai~ 224 (248)
T 1geq_A 147 ERLKVIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRIC--RNKVAVGFGVSKREHVVSLLKEGANGVVVGSALV 224 (248)
T ss_dssp HHHHHHHHHCSSEEEEECCC-------CCCHHHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred HHHHHHHhcCCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhc--CCCEEEEeecCCHHHHHHHHHcCCCEEEEcHHHH
Confidence 01 00 11234566666655 6999999999999999999999999999999998
Q ss_pred HhcccCCHHHHHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQMLRDEF 275 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~~~l 275 (308)
....... +.++++++.+++.|
T Consensus 225 ~~~~~~~-~~~~~~~~~~~~~~ 245 (248)
T 1geq_A 225 KIIGEKG-REATEFLKKKVEEL 245 (248)
T ss_dssp HHHHHHG-GGCHHHHHHHHHHH
T ss_pred hhHhhCh-HHHHHHHHHHHHHh
Confidence 7531111 33444444444443
No 81
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.96 E-value=3.4e-08 Score=88.50 Aligned_cols=102 Identities=17% Similarity=0.177 Sum_probs=79.2
Q ss_pred HHHHHHHHHhcCCCEEEEec-CCHHHHHHHHHcCCcEEEEeccc----------------c-------------------
Q 021739 154 WKDVKWLQTITSLPILVKGV-LTAEDASLAIQYGAAGIIVSNHG----------------A------------------- 197 (308)
Q Consensus 154 ~~~i~~ir~~~~~Pv~vK~~-~~~e~a~~~~~~G~d~i~v~~~g----------------g------------------- 197 (308)
.+.++.+|+.+++||+.|.. .++.++..+..+|||+|.+...- |
T Consensus 109 ~~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lGl~~lvevh~~eEl~~A~~~ 188 (272)
T 3tsm_A 109 PEFLTAARQACSLPALRKDFLFDPYQVYEARSWGADCILIIMASVDDDLAKELEDTAFALGMDALIEVHDEAEMERALKL 188 (272)
T ss_dssp HHHHHHHHHTSSSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHTTS
T ss_pred HHHHHHHHHhcCCCEEECCccCCHHHHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhc
Confidence 56888999989999999975 56778888899999999886421 0
Q ss_pred ---------cCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHh
Q 021739 198 ---------RQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 198 ---------~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
+.+.....+++...++.+.++.++|+|+.|||+|++|+.++..+||++|.+|+.++..
T Consensus 189 ga~iIGinnr~l~t~~~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga~gvLVG~almr~ 255 (272)
T 3tsm_A 189 SSRLLGVNNRNLRSFEVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLMRQ 255 (272)
T ss_dssp CCSEEEEECBCTTTCCBCTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTTCCEEEECHHHHTS
T ss_pred CCCEEEECCCCCccCCCChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHcCC
Confidence 0011112345556666666666799999999999999999999999999999999975
No 82
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.95 E-value=1.6e-08 Score=90.83 Aligned_cols=50 Identities=22% Similarity=0.288 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHh
Q 021739 206 TVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 206 ~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
.++.+.++.+.+..++|+++.|||++++|+.++..+||++|.+|+.++.+
T Consensus 199 dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~GadgvlVGsal~~a 248 (272)
T 3qja_A 199 DRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTS 248 (272)
T ss_dssp CTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTTCSEEEECHHHHTC
T ss_pred CHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcCCCEEEEcHHHhCC
Confidence 34555566555544799999999999999999999999999999999874
No 83
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.95 E-value=2.3e-09 Score=97.52 Aligned_cols=121 Identities=22% Similarity=0.220 Sum_probs=86.3
Q ss_pred CCCEEEEecCCHHHHHHHHHcCCcEEEEecccccC---------------------CC---------CCcchHHHHHHHH
Q 021739 165 SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ---------------------LD---------YVPATVMALEEVV 214 (308)
Q Consensus 165 ~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~---------------------~~---------~~~~~~~~l~~i~ 214 (308)
++++++. +.+++++..+.++|+|+|.+.+..+.. .. ..++.++.+.+++
T Consensus 125 ~i~l~~~-v~~~~~~~~a~~~Gad~I~v~G~~~~g~~~e~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~ 203 (297)
T 2zbt_A 125 KVPFVCG-ARNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVH 203 (297)
T ss_dssp SSCEEEE-ESSHHHHHHHHHTTCSEEEECCCSSSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHH
T ss_pred CceEEee-cCCHHHHHHHHHcCCCEEEEcccccCcchHHHHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHH
Confidence 6777754 457888888999999999876311000 00 0123455667776
Q ss_pred HHccCCCeEE--EecCCCCHHHHHHHHHcCCCEEEEchHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHcCCCCHhhhcc
Q 021739 215 QAAKGRVPVF--LDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITR 292 (308)
Q Consensus 215 ~~~~~~ipvi--a~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~ 292 (308)
+.. ++|++ ++|||++++|+.+++.+|||+|++||.++.+ ..+ ...++.+++.++.++...++.+++++++
T Consensus 204 ~~~--~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~~---~dp---~~~~~~l~~~i~~~~~~~~~~~~~~~~g 275 (297)
T 2zbt_A 204 DHG--RLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKS---GDP---RKRARAIVRAVAHYNDPEVLAEVSEDLG 275 (297)
T ss_dssp HHS--SCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGGS---SCH---HHHHHHHHHHHHTTTCHHHHHHHHTTCC
T ss_pred Hhc--CCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhCC---CCH---HHHHHHHHHHHHHHhchHhhhHHHHhcC
Confidence 654 68888 9999999999999999999999999998863 223 3566677777777776666677888776
Q ss_pred cc
Q 021739 293 NH 294 (308)
Q Consensus 293 ~~ 294 (308)
..
T Consensus 276 ~~ 277 (297)
T 2zbt_A 276 EP 277 (297)
T ss_dssp CC
T ss_pred ce
Confidence 54
No 84
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=98.94 E-value=1.8e-09 Score=98.74 Aligned_cols=79 Identities=25% Similarity=0.299 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHccCCCeEE--EecCCCCHHHHHHHHHcCCCEEEEchHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHcC
Q 021739 206 TVMALEEVVQAAKGRVPVF--LDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSG 283 (308)
Q Consensus 206 ~~~~l~~i~~~~~~~ipvi--a~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~l~~~m~~~G 283 (308)
.++.+.++++.. ++||+ ++|||+|++|+.+++.+|||+|++||.++.. ..+. ..++.+++.+..++...+
T Consensus 195 ~~~~i~~i~~~~--~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~---~~p~---~~~~~l~~~~~~~~~~~~ 266 (305)
T 2nv1_A 195 PYELLLQIKKDG--KLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKS---DNPA---KFAKAIVEATTHFTDYKL 266 (305)
T ss_dssp CHHHHHHHHHHT--SCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGS---SCHH---HHHHHHHHHHHTTTCHHH
T ss_pred cHHHHHHHHHhc--CCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcC---CCHH---HHHHHHHHHHHHhcChhh
Confidence 345566665544 78998 9999999999999999999999999999863 2222 344555555555544444
Q ss_pred CCCHhhhcc
Q 021739 284 CRSLKEITR 292 (308)
Q Consensus 284 ~~~i~~l~~ 292 (308)
..++.++.+
T Consensus 267 ~~~~~~~~g 275 (305)
T 2nv1_A 267 IAELSKELG 275 (305)
T ss_dssp HHHHTSCC-
T ss_pred HHHHHHHhh
Confidence 444444433
No 85
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=98.92 E-value=1.2e-08 Score=112.27 Aligned_cols=194 Identities=13% Similarity=0.144 Sum_probs=122.2
Q ss_pred eeecCcccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCCCHHHHh-------ccCC--CCceEEeeecC
Q 021739 3 TTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVS-------STGP--GIRFFQLYVTK 73 (308)
Q Consensus 3 t~~~g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~~e~i~-------~~~~--~~~~~Ql~~~~ 73 (308)
|+++|+ .||+.+||+... + +..|+.++.+.|....++.....+.+++. +..+ .+..+++.. .
T Consensus 584 t~llg~---~PIi~~gM~~~~-~----~~~lvaAvsnAGglg~l~~~~~~~~e~l~~~I~~~~~~t~~~~~~gvN~~~-~ 654 (2051)
T 2uv8_G 584 SKLIGR---PPLLVPGMTPCT-V----SPDFVAATTNAGYTIELAGGGYFSAAGMTAAIDSVVSQIEKGSTFGINLIY-V 654 (2051)
T ss_dssp HHHHSS---CSEEECCCHHHH-T----CHHHHHHHHHTTCEEEEEGGGCCSHHHHHHHHHHHHHHSCTTCCEEEEEET-T
T ss_pred HHhhCc---cceecCCCcccc-c----cHHHHHHHHcCCcEEEEccCCCCCHHHHHHHHHHHHHhcCCCCceEEEEee-c
Confidence 346772 699999998331 2 34889999999988888544444444333 2122 366777653 3
Q ss_pred Cch---HHHHHHHHHHHcCCcE--EEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhc
Q 021739 74 HRN---VDAQLVKRAERAGFKA--IALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQI 148 (308)
Q Consensus 74 d~~---~~~~~~~~~~~~g~~~--i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (308)
++. +..++++.+.+.|++. +.++.+.|.. +
T Consensus 655 ~~~~~~~~~~~~~~~~~~gv~i~~v~~~ag~p~~---------------------------------------~------ 689 (2051)
T 2uv8_G 655 NPFMLQWGIPLIKELRSKGYPIQFLTIGAGVPSL---------------------------------------E------ 689 (2051)
T ss_dssp CTTHHHHHHHHHHHHHHTTCSEEEEEEESSCCCH---------------------------------------H------
T ss_pred ChhhhhhhHHHHHHHHHcCCCcceEEecCCCCch---------------------------------------h------
Confidence 332 2237778888889887 5555433311 0
Q ss_pred ccccCHHHHHHHHHhcCCCEEEEecCCH---HHHHHHHHcCCcEE-EEe--cc--cccCC--CCCcchHHHHHHHHHHcc
Q 021739 149 DRSLNWKDVKWLQTITSLPILVKGVLTA---EDASLAIQYGAAGI-IVS--NH--GARQL--DYVPATVMALEEVVQAAK 218 (308)
Q Consensus 149 d~~~~~~~i~~ir~~~~~Pv~vK~~~~~---e~a~~~~~~G~d~i-~v~--~~--gg~~~--~~~~~~~~~l~~i~~~~~ 218 (308)
+.++.+ +..+++++.....+. ..+..++++|+|++ ++. |. ||+.. +........+.++++.+
T Consensus 690 ------~~~~~i-~~lG~~vi~~~~~~~~a~~~~~~~~~~g~d~~ii~~~~G~eaGGH~g~~d~~~~~l~l~~~v~~~~- 761 (2051)
T 2uv8_G 690 ------VASEYI-ETLGLKYLGLKPGSIDAISQVINIAKAHPNFPIALQWTGGRGGGHHSFEDAHTPMLQMYSKIRRHP- 761 (2051)
T ss_dssp ------HHHHHH-HHSCCSCEEECCCSHHHHHHHHHHHHHSTTSCEEEEECCSSCSEECCSCCSSHHHHHHHHHHTTCT-
T ss_pred ------hHHHHH-HHcCCEEEEecCchHHHHHHHHHHHHhCCCceeEEEEEccCcCCCCCcccccccHHHHHHHHHhcC-
Confidence 011222 223888776444333 44677888899993 333 31 33321 11223344567776655
Q ss_pred CCCeEEEecCCCCHHHHHHHH-----------HcCCCEEEEchHHHHhcccC
Q 021739 219 GRVPVFLDGGVRRGTDVFKAL-----------ALGASGVFVGRPVPFSLAVD 259 (308)
Q Consensus 219 ~~ipvia~GGI~~~~d~~k~l-----------~~GAd~V~ig~~~l~~~~~~ 259 (308)
++|||+.|||.++.++..+| ++|||+|+||+.|+..-.+.
T Consensus 762 -~ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lgadGv~~GTrf~~t~Ea~ 812 (2051)
T 2uv8_G 762 -NIMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPFDGFLFGSRVMIAKEVK 812 (2051)
T ss_dssp -TBCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCCSCEECSGGGTTSTTSC
T ss_pred -CceEEEeCCCCCHHHHHHHHccccccccCccCCCCceeeechHHHhCcccc
Confidence 79999999999999999999 89999999999998754333
No 86
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=98.92 E-value=2.1e-08 Score=87.80 Aligned_cols=96 Identities=17% Similarity=0.222 Sum_probs=73.6
Q ss_pred HHHHHHHHHhc-CCCEEEEecCCHHHHHHHHHcCCcEE--EEeccc-ccCCCCCcchHHHHHHHHHHccCCCeEEEecCC
Q 021739 154 WKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGI--IVSNHG-ARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 229 (308)
Q Consensus 154 ~~~i~~ir~~~-~~Pv~vK~~~~~e~a~~~~~~G~d~i--~v~~~g-g~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI 229 (308)
.+.++.+++.+ +.++++ ...+.+++..+.++|+|+| .+.+.. +.+ ....+.+..+.++++. ++||+++|||
T Consensus 121 ~~~i~~i~~~~~~~~v~~-~~~t~~ea~~a~~~Gad~i~~~v~g~~~~~~-~~~~~~~~~i~~~~~~---~ipvia~GGI 195 (234)
T 1yxy_A 121 ASFIRQVKEKYPNQLLMA-DISTFDEGLVAHQAGIDFVGTTLSGYTPYSR-QEAGPDVALIEALCKA---GIAVIAEGKI 195 (234)
T ss_dssp HHHHHHHHHHCTTCEEEE-ECSSHHHHHHHHHTTCSEEECTTTTSSTTSC-CSSSCCHHHHHHHHHT---TCCEEEESCC
T ss_pred HHHHHHHHHhCCCCeEEE-eCCCHHHHHHHHHcCCCEEeeeccccCCCCc-CCCCCCHHHHHHHHhC---CCCEEEECCC
Confidence 46788888876 666665 3467889999999999999 444322 111 1123456777777653 6999999999
Q ss_pred CCHHHHHHHHHcCCCEEEEchHHHH
Q 021739 230 RRGTDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 230 ~~~~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
+|.+|+.+++++|||+|++||+++.
T Consensus 196 ~s~~~~~~~~~~Gad~v~vGsal~~ 220 (234)
T 1yxy_A 196 HSPEEAKKINDLGVAGIVVGGAITR 220 (234)
T ss_dssp CSHHHHHHHHTTCCSEEEECHHHHC
T ss_pred CCHHHHHHHHHCCCCEEEEchHHhC
Confidence 9999999999999999999998763
No 87
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=98.86 E-value=1.5e-08 Score=90.85 Aligned_cols=183 Identities=19% Similarity=0.177 Sum_probs=112.7
Q ss_pred cCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCCCHHHHhc-cCCC-CceEEeeecCC----c--hHHHHH
Q 021739 10 ISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSS-TGPG-IRFFQLYVTKH----R--NVDAQL 81 (308)
Q Consensus 10 ~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~~e~i~~-~~~~-~~~~Ql~~~~d----~--~~~~~~ 81 (308)
++.|+.++||.+. .+ -..+++.+.+.|++.++.+.. .++.... .... +..+|+..+.+ . +.....
T Consensus 32 id~~~~l~p~~~~--~~---~~~~~~~~~~~g~~~i~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~~~~~ 104 (273)
T 2qjg_A 32 MDHGVSNGPIKGL--ID---IRKTVNDVAEGGANAVLLHKG--IVRHGHRGYGKDVGLIIHLSGGTAISPNPLKKVIVTT 104 (273)
T ss_dssp CCHHHHHCSCTTS--SS---HHHHHHHHHHHTCSEEEECHH--HHHSCCCSSSCCCEEEEECEECCTTSSSTTCCEECSC
T ss_pred cccccccCCCcch--hh---HHHHHHHHHhcCCCEEEeCHH--HHHHHHHhhcCCCCEEEEEcCCCcCCCCcccchHHHH
Confidence 5667778888554 32 136889999999998875321 0111111 1112 45667764331 1 111344
Q ss_pred HHHHHHcCCcEE--EEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHH
Q 021739 82 VKRAERAGFKAI--ALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKW 159 (308)
Q Consensus 82 ~~~~~~~g~~~i--~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ 159 (308)
++++.+.|++.+ .++.+++.. .+.+. ..+.+.+
T Consensus 105 v~~a~~~Ga~~v~~~l~~~~~~~--------------------------------------~~~~~-------~~~~v~~ 139 (273)
T 2qjg_A 105 VEEAIRMGADAVSIHVNVGSDED--------------------------------------WEAYR-------DLGMIAE 139 (273)
T ss_dssp HHHHHHTTCSEEEEEEEETSTTH--------------------------------------HHHHH-------HHHHHHH
T ss_pred HHHHHHcCCCEEEEEEecCCCCH--------------------------------------HHHHH-------HHHHHHH
Confidence 566777899998 444443210 01110 0123333
Q ss_pred HHHhcCCCEEEEec---------CCH---HHH-HHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEe
Q 021739 160 LQTITSLPILVKGV---------LTA---EDA-SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLD 226 (308)
Q Consensus 160 ir~~~~~Pv~vK~~---------~~~---e~a-~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~ 226 (308)
+.+.+++|+++... .+. +++ +.+.++|+|+|.++. +..++.+.++.+.+ ++||++.
T Consensus 140 ~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~---------~~~~~~l~~i~~~~--~ipvva~ 208 (273)
T 2qjg_A 140 TCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKTSY---------TGDIDSFRDVVKGC--PAPVVVA 208 (273)
T ss_dssp HHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECC---------CSSHHHHHHHHHHC--SSCEEEE
T ss_pred HHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEECC---------CCCHHHHHHHHHhC--CCCEEEE
Confidence 33446899988751 333 333 888999999998763 12467778887666 7999999
Q ss_pred cCCCC--HHH----HHHHHHcCCCEEEEchHHHHh
Q 021739 227 GGVRR--GTD----VFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 227 GGI~~--~~d----~~k~l~~GAd~V~ig~~~l~~ 255 (308)
|||++ .+| +.+++.+||++|.+||.++.+
T Consensus 209 GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~~~ 243 (273)
T 2qjg_A 209 GGPKTNTDEEFLQMIKDAMEAGAAGVAVGRNIFQH 243 (273)
T ss_dssp CCSCCSSHHHHHHHHHHHHHHTCSEEECCHHHHTS
T ss_pred eCCCCCCHHHHHHHHHHHHHcCCcEEEeeHHhhCC
Confidence 99995 778 555667999999999998864
No 88
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=98.85 E-value=5.8e-08 Score=87.17 Aligned_cols=148 Identities=19% Similarity=0.165 Sum_probs=95.6
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcc---
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQID--- 149 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--- 149 (308)
.+.+.+.+.++.+.+. +|+|.|++ |. +.|.- .++..|........
T Consensus 27 P~~~~~~~~~~~l~~~-aD~IElG~--Pf------------sdP~a-----------------dGp~Iq~a~~~Al~~G~ 74 (271)
T 1ujp_A 27 PSREGFLQAVEEVLPY-ADLLEIGL--PY------------SDPLG-----------------DGPVIQRASELALRKGM 74 (271)
T ss_dssp SCHHHHHHHHHHHGGG-CSSEEEEC--CC------------CC---------------------CHHHHHHHHHHHHTTC
T ss_pred CChHHHHHHHHHHHhc-CCEEEECC--CC------------CCccc-----------------ccHHHHHHHHHHHHcCC
Confidence 3456777888888888 99999865 53 22310 02333332222212
Q ss_pred -cccCHHHHHHHHHhcCCCEEEEecCC-------HHHHHHHHHcCCcEEEEecc---------------cc---------
Q 021739 150 -RSLNWKDVKWLQTITSLPILVKGVLT-------AEDASLAIQYGAAGIIVSNH---------------GA--------- 197 (308)
Q Consensus 150 -~~~~~~~i~~ir~~~~~Pv~vK~~~~-------~e~a~~~~~~G~d~i~v~~~---------------gg--------- 197 (308)
.+..++.++++|+..++||++-...+ ..+++.+.++|+|++.+-.- +-
T Consensus 75 ~~~~~~~~v~~ir~~~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~ 154 (271)
T 1ujp_A 75 SVQGALELVREVRALTEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPT 154 (271)
T ss_dssp CHHHHHHHHHHHHHHCCSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTT
T ss_pred CHHHHHHHHHHHHhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCC
Confidence 22246789999998899998843212 35678899999998876321 00
Q ss_pred cC-------------C--------CCC------cchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 021739 198 RQ-------------L--------DYV------PATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGR 250 (308)
Q Consensus 198 ~~-------------~--------~~~------~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~ 250 (308)
+. . ..| .+..+.+.++++.. ++||++.|||++++++.++ .|||+|.+|+
T Consensus 155 s~~eri~~ia~~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGS 230 (271)
T 1ujp_A 155 STDARIATVVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKART--ALPVAVGFGVSGKATAAQA--AVADGVVVGS 230 (271)
T ss_dssp CCHHHHHHHHTTCCSCEEEECC------------CCHHHHHHHHTTC--CSCEEEESCCCSHHHHHHH--TTSSEEEECH
T ss_pred CCHHHHHHHHHhCCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhc--CCCEEEEcCCCCHHHHHHh--cCCCEEEECh
Confidence 00 0 001 11134566665543 7999999999999999996 9999999999
Q ss_pred HHHHhc
Q 021739 251 PVPFSL 256 (308)
Q Consensus 251 ~~l~~~ 256 (308)
++....
T Consensus 231 Ai~~~~ 236 (271)
T 1ujp_A 231 ALVRAL 236 (271)
T ss_dssp HHHHHH
T ss_pred HHhccc
Confidence 999864
No 89
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.84 E-value=6.1e-09 Score=94.52 Aligned_cols=111 Identities=21% Similarity=0.217 Sum_probs=79.5
Q ss_pred cCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCC-----------------------CC-------CcchHHHHHHH
Q 021739 164 TSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQL-----------------------DY-------VPATVMALEEV 213 (308)
Q Consensus 164 ~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~-----------------------~~-------~~~~~~~l~~i 213 (308)
.+.++++ .+.+.+++.++.++|+|.|.+.+++|+.. +. ..++++.+.++
T Consensus 124 ~g~~vvv-~v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i 202 (297)
T 4adt_A 124 FKTPFVC-GCTNLGEALRRISEGASMIRTKGEAGTGNIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLT 202 (297)
T ss_dssp CSSCEEE-EESSHHHHHHHHHHTCSEEEECCCTTSCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHH
T ss_pred CCCeEEE-EeCCHHHHHHHHhCCCCEEEECCCcCCCchHHHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHH
Confidence 4678877 56788999999999999999887644320 01 12456677777
Q ss_pred HHHccCCCeEE--EecCCCCHHHHHHHHHcCCCEEEEchHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHcC
Q 021739 214 VQAAKGRVPVF--LDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSG 283 (308)
Q Consensus 214 ~~~~~~~ipvi--a~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~l~~~m~~~G 283 (308)
.+.+ ++|++ +.|||++++|+.+++.+|||+|++|+.++.+ ..+ ...++.+++.++.++...+
T Consensus 203 ~~~~--~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a---~dp---~~~~~~l~~ai~~~~~~~~ 266 (297)
T 4adt_A 203 RKLK--RLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFES---ENP---QKMASSIVMAVSNFNNPKI 266 (297)
T ss_dssp HHHT--SCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTS---SCH---HHHHHHHHHHHHTTTCHHH
T ss_pred HHhc--CCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcC---CCH---HHHHHHHHHHHHhhCCHHH
Confidence 7665 56766 9999999999999999999999999999864 222 2344555555554444333
No 90
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=98.82 E-value=9.9e-09 Score=116.66 Aligned_cols=194 Identities=18% Similarity=0.219 Sum_probs=123.0
Q ss_pred ecCcccCCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCCCHHHH-------hccCC-C-CceEEeeecCCc
Q 021739 5 VLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEV-------SSTGP-G-IRFFQLYVTKHR 75 (308)
Q Consensus 5 ~~g~~~~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~~e~i-------~~~~~-~-~~~~Ql~~~~d~ 75 (308)
++| +.||+.+||++.. +. ..|+.+..+.|....++.....+.+++ .+..+ + +..+++. ..++
T Consensus 424 ~lg---~~PIi~a~M~~~~-s~----~~LaaAVs~AGglG~l~~~g~~~~~~l~~~i~~~r~~~~~~~p~~vNl~-~~~p 494 (3089)
T 3zen_D 424 LTG---RSPILLAGMTPTT-VD----AKIVAAAANAGHWAELAGGGQVTEQIFNDRIAELETLLEPGRAIQFNTL-FLDP 494 (3089)
T ss_dssp HHS---SCSEEECCCHHHH-TS----HHHHHHHHHTTCEEEECSTTCCSHHHHHHHHHHHHHHSCTTCCCEEEEE-CSCH
T ss_pred hcC---CCCEEeCCCcCCc-CC----HHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHHhcCCCCceeechh-hcCh
Confidence 455 6899999998651 22 379999999998888865544344332 22232 2 4555555 3344
Q ss_pred hH------HHHHHHHHHHcC--CcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhh
Q 021739 76 NV------DAQLVKRAERAG--FKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQ 147 (308)
Q Consensus 76 ~~------~~~~~~~~~~~g--~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (308)
.. .+++++.+.+.| ++++.++.|.|.. + +
T Consensus 495 ~~~~~~~g~~~~~~~~~~~g~~vdgv~~~aG~P~~----------------------e----------------e----- 531 (3089)
T 3zen_D 495 YLWKLQVGGKRLVQRARQSGAPIDGLVVSAGIPDL----------------------E----------------E----- 531 (3089)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSCCEEEEESSCCCH----------------------H----------------H-----
T ss_pred hhhhhccCHHHHHHHHHHcCCCceEEEEeCCCCch----------------------h----------------H-----
Confidence 32 146778888899 6678777665521 0 0
Q ss_pred cccccCHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCc------EEEEecc--cccCCCCCcchHHHHHHHHHHcc-
Q 021739 148 IDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAA------GIIVSNH--GARQLDYVPATVMALEEVVQAAK- 218 (308)
Q Consensus 148 ~d~~~~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d------~i~v~~~--gg~~~~~~~~~~~~l~~i~~~~~- 218 (308)
..+.++.+++. ++.++.=.+.+.++++++.+.|+| +|++.+. ||+.. .......+......++
T Consensus 532 -----~~~~i~~l~~~-Gi~~i~~~~~t~~~a~~~~~i~~d~~~~~y~vv~~G~eaGGH~g--~~~~~~ll~~~~~~ir~ 603 (3089)
T 3zen_D 532 -----AVDIIDELNEV-GISHVVFKPGTVEQIRSVIRIAAEVPTKPVIVHIEGGRAGGHHS--WEDLDDLLLATYSELRS 603 (3089)
T ss_dssp -----HHHHHTSTTHH-HHCSEEECCCSHHHHHHHHHHHTTSTTSCEEEEECCSSSSEECC--SCCHHHHHHHHHHHHTT
T ss_pred -----hHHHHHHHHHc-CCEEEEEeCCCHHHHHHHHHhhhhcCCCcEEEEEeCCCcCCCCC--cccHHHHHHHHHHHHhh
Confidence 01223333332 334443234678889999999999 7777653 23221 1233444533333222
Q ss_pred -CCCeEEEecCCCCHHHHHHHH-----------HcCCCEEEEchHHHHhccc
Q 021739 219 -GRVPVFLDGGVRRGTDVFKAL-----------ALGASGVFVGRPVPFSLAV 258 (308)
Q Consensus 219 -~~ipvia~GGI~~~~d~~k~l-----------~~GAd~V~ig~~~l~~~~~ 258 (308)
.++|||+.|||.+++++..++ .+|||+|+||+.|+....+
T Consensus 604 ~~~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lGAdGV~vGTrfl~t~Ea 655 (3089)
T 3zen_D 604 RSNITICVGGGIGTPERSAEYLSGRWAEVHGYPLMPIDGILVGTAAMATLEA 655 (3089)
T ss_dssp CTTEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCCCSEEECSSTTTTCTTS
T ss_pred cCCCeEEEEeCCCCHHHHHHHhccccccccCccCCCCCEEEecHHHHhCccc
Confidence 379999999999999999999 9999999999999976443
No 91
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=98.80 E-value=2.2e-08 Score=87.62 Aligned_cols=168 Identities=13% Similarity=0.092 Sum_probs=112.7
Q ss_pred eeecCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhc
Q 021739 69 LYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQI 148 (308)
Q Consensus 69 l~~~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (308)
+....|++...++++.+.+.|++.|.+++..|..-...+.++..|... .+..+++. ..+..+.....+++..++
T Consensus 39 Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~-~iGaGTVl--t~~~a~~Ai~AGA~fIvs--- 112 (232)
T 4e38_A 39 VIAIDNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPEM-LIGAGTIL--NGEQALAAKEAGATFVVS--- 112 (232)
T ss_dssp EECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTC-EEEEECCC--SHHHHHHHHHHTCSEEEC---
T ss_pred EEEcCCHHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCCC-EEeECCcC--CHHHHHHHHHcCCCEEEe---
Confidence 343678889999999999999999999998876444456677666321 22222221 111111100112222333
Q ss_pred ccccCHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecC
Q 021739 149 DRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGG 228 (308)
Q Consensus 149 d~~~~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GG 228 (308)
|.++.+.++..++ .++|++. ++.|+.++..+.++|+|+|.++... . ......|+.++..+ .++|+++.||
T Consensus 113 -P~~~~~vi~~~~~-~gi~~ip-Gv~TptEi~~A~~~Gad~vK~FPa~--~----~gG~~~lkal~~p~-p~ip~~ptGG 182 (232)
T 4e38_A 113 -PGFNPNTVRACQE-IGIDIVP-GVNNPSTVEAALEMGLTTLKFFPAE--A----SGGISMVKSLVGPY-GDIRLMPTGG 182 (232)
T ss_dssp -SSCCHHHHHHHHH-HTCEEEC-EECSHHHHHHHHHTTCCEEEECSTT--T----TTHHHHHHHHHTTC-TTCEEEEBSS
T ss_pred -CCCCHHHHHHHHH-cCCCEEc-CCCCHHHHHHHHHcCCCEEEECcCc--c----ccCHHHHHHHHHHh-cCCCeeeEcC
Confidence 3455667777665 4888876 4679999999999999999986532 0 01245666665444 4799999999
Q ss_pred CCCHHHHHHHHHcCCCEEEEchHHH
Q 021739 229 VRRGTDVFKALALGASGVFVGRPVP 253 (308)
Q Consensus 229 I~~~~d~~k~l~~GAd~V~ig~~~l 253 (308)
|. ++++.+++++||.++..|+.+.
T Consensus 183 I~-~~n~~~~l~aGa~~~vgGs~l~ 206 (232)
T 4e38_A 183 IT-PSNIDNYLAIPQVLACGGTWMV 206 (232)
T ss_dssp CC-TTTHHHHHTSTTBCCEEECGGG
T ss_pred CC-HHHHHHHHHCCCeEEEECchhc
Confidence 95 8999999999999988888665
No 92
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.80 E-value=3e-08 Score=85.58 Aligned_cols=191 Identities=13% Similarity=0.129 Sum_probs=110.0
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
..|.+...+.++.+.+.|++.|.++..+|..-...+.++..+..+..+...+.. +.+.++.....++..... +.
T Consensus 15 ~~d~~~~~~~~~~~~~~G~~~i~l~~~~~~~~~~i~~i~~~~~~~l~vg~g~~~--~~~~i~~a~~~Gad~V~~----~~ 88 (212)
T 2v82_A 15 GITPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALIGAGTVL--KPEQVDALARMGCQLIVT----PN 88 (212)
T ss_dssp TCCHHHHHHHHHHHHHHTCCEEEEETTSTTHHHHHHHHHHHHTTTSEEEEECCC--SHHHHHHHHHTTCCEEEC----SS
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHhCCCCeEEEecccc--CHHHHHHHHHcCCCEEEe----CC
Confidence 567777777777777788888877765543222334454444433222100000 000000000000000111 11
Q ss_pred cCHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCC
Q 021739 152 LNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR 231 (308)
Q Consensus 152 ~~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~ 231 (308)
...+.++..+ ..+.++++. +.+++++..+.+.|+|+|.+.... +..++.+.++++.+..++||++.|||.
T Consensus 89 ~~~~~~~~~~-~~g~~~~~g-~~t~~e~~~a~~~G~d~v~v~~t~-------~~g~~~~~~l~~~~~~~ipvia~GGI~- 158 (212)
T 2v82_A 89 IHSEVIRRAV-GYGMTVCPG-CATATEAFTALEAGAQALKIFPSS-------AFGPQYIKALKAVLPSDIAVFAVGGVT- 158 (212)
T ss_dssp CCHHHHHHHH-HTTCEEECE-ECSHHHHHHHHHTTCSEEEETTHH-------HHCHHHHHHHHTTSCTTCEEEEESSCC-
T ss_pred CCHHHHHHHH-HcCCCEEee-cCCHHHHHHHHHCCCCEEEEecCC-------CCCHHHHHHHHHhccCCCeEEEeCCCC-
Confidence 2344554444 456676655 678899999999999999873211 123455666655442259999999997
Q ss_pred HHHHHHHHHcCCCEEEEchHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Q 021739 232 GTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMA 280 (308)
Q Consensus 232 ~~d~~k~l~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~l~~~m~ 280 (308)
.+++.+++.+||++|.+|+.++... ...+...+.++.+++.++....
T Consensus 159 ~~~i~~~~~~Ga~gv~vGsai~~~~--~~~~d~~~~~~~l~~~~~~~~~ 205 (212)
T 2v82_A 159 PENLAQWIDAGCAGAGLGSDLYRAG--QSVERTAQQAAAFVKAYREAVQ 205 (212)
T ss_dssp TTTHHHHHHHTCSEEEECTTTCCTT--CCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEChHHhCCC--CCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987531 1134455566666666655544
No 93
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.77 E-value=1.6e-07 Score=82.64 Aligned_cols=98 Identities=18% Similarity=0.232 Sum_probs=73.4
Q ss_pred CHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEeccc-ccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCC
Q 021739 153 NWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHG-ARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR 231 (308)
Q Consensus 153 ~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~g-g~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~ 231 (308)
+++..+.+.+. ++.++.=...++..++++.++|+++|.-.+.. |+. .+..+++.|..+++.. ++|||+.|||.+
T Consensus 124 tv~aa~~L~~~-Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~pIGsG--~Gi~~~~lI~~I~e~~--~vPVI~eGGI~T 198 (265)
T 1wv2_A 124 TLKAAEQLVKD-GFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSG--LGICNPYNLRIILEEA--KVPVLVDAGVGT 198 (265)
T ss_dssp HHHHHHHHHTT-TCEEEEEECSCHHHHHHHHHSCCSEEEECSSSTTCC--CCCSCHHHHHHHHHHC--SSCBEEESCCCS
T ss_pred HHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHhCCCEEEeCCccCCCC--CCcCCHHHHHHHHhcC--CCCEEEeCCCCC
Confidence 33444444332 55555335678999999999999999653321 221 1345688888888754 899999999999
Q ss_pred HHHHHHHHHcCCCEEEEchHHHHh
Q 021739 232 GTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 232 ~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
++|+.+++++|||+|++|+++..+
T Consensus 199 PsDAa~AmeLGAdgVlVgSAI~~a 222 (265)
T 1wv2_A 199 ASDAAIAMELGCEAVLMNTAIAHA 222 (265)
T ss_dssp HHHHHHHHHHTCSEEEESHHHHTS
T ss_pred HHHHHHHHHcCCCEEEEChHHhCC
Confidence 999999999999999999999853
No 94
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=98.74 E-value=2e-07 Score=81.63 Aligned_cols=99 Identities=23% Similarity=0.145 Sum_probs=71.7
Q ss_pred cccccCHHHHHHHHHhcCCCEEEEec-----CCHHHH----HHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHcc
Q 021739 148 IDRSLNWKDVKWLQTITSLPILVKGV-----LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAK 218 (308)
Q Consensus 148 ~d~~~~~~~i~~ir~~~~~Pv~vK~~-----~~~e~a----~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~ 218 (308)
+|.++..+.|+++++.++- ..+|.+ ++.++. +.+.++|+|+|..|...+ .+..+++.+...++.+.
T Consensus 124 g~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKTSTGf~----~ggAt~~dv~lmr~~vg 198 (239)
T 3ngj_A 124 KKYDDVEKDVKAVVDASGK-ALTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKTSTGFG----THGATPEDVKLMKDTVG 198 (239)
T ss_dssp TCHHHHHHHHHHHHHHHTT-SEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSSS----SCCCCHHHHHHHHHHHG
T ss_pred ccHHHHHHHHHHHHHHhcC-CceEEEEecCCCCHHHHHHHHHHHHHHCcCEEECCCCCC----CCCCCHHHHHHHHHhhC
Confidence 3445556788999887752 256654 455554 445899999999764211 13346666666666666
Q ss_pred CCCeEEEecCCCCHHHHHHHHHcCCCEEEEchH
Q 021739 219 GRVPVFLDGGVRRGTDVFKALALGASGVFVGRP 251 (308)
Q Consensus 219 ~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~ 251 (308)
.+++|.++||||+.+|+.+++++||+.++..+.
T Consensus 199 ~~v~VKasGGIrt~~da~~~i~aGA~riGtS~~ 231 (239)
T 3ngj_A 199 DKALVKAAGGIRTFDDAMKMINNGASRIGASAG 231 (239)
T ss_dssp GGSEEEEESSCCSHHHHHHHHHTTEEEEEESCH
T ss_pred CCceEEEeCCCCCHHHHHHHHHhcccceecccH
Confidence 689999999999999999999999998877664
No 95
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=98.71 E-value=2.2e-07 Score=81.84 Aligned_cols=103 Identities=12% Similarity=0.208 Sum_probs=80.5
Q ss_pred CHHHHHHHHHhcCCCEEEEec-CCHHHHHHHHHcCCcEEEEeccc----------------c------------------
Q 021739 153 NWKDVKWLQTITSLPILVKGV-LTAEDASLAIQYGAAGIIVSNHG----------------A------------------ 197 (308)
Q Consensus 153 ~~~~i~~ir~~~~~Pv~vK~~-~~~e~a~~~~~~G~d~i~v~~~g----------------g------------------ 197 (308)
+.+.++.+|+.+++||+.|.. .++.+...+..+|||+|.+...- |
T Consensus 92 s~~~L~~vr~~v~lPvLrKDFiid~yQI~eAr~~GADaILLI~a~L~~~~l~~l~~~A~~lGl~~LvEVh~~~El~rAl~ 171 (258)
T 4a29_A 92 SYETLRKIASSVSIPILMSDFIVKESQIDDAYNLGADTVLLIVKILTERELESLLEYARSYGMEPLILINDENDLDIALR 171 (258)
T ss_dssp CHHHHHHHHTTCSSCEEEESCCCSHHHHHHHHHHTCSEEEEEGGGSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCEeeccccccHHHHHHHHHcCCCeeehHHhhcCHHHHHHHHHHHHHHhHHHHHhcchHHHHHHHhc
Confidence 478999999999999999975 68888889999999999875421 0
Q ss_pred ----------cCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHh
Q 021739 198 ----------RQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 198 ----------~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
+.+.....+.....++.+.++.++.+|+.+||++++|+.++...|+|+|.||..|+..
T Consensus 172 ~~a~iIGINNRnL~tf~vdl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGealmr~ 239 (258)
T 4a29_A 172 IGARFIGIMSRDFETGEINKENQRKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFLISSSLMRN 239 (258)
T ss_dssp TTCSEEEECSBCTTTCCBCHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCCEEEECHHHHHC
T ss_pred CCCcEEEEeCCCccccccCHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEEEECHHHhCC
Confidence 0111112334444555555566789999999999999999999999999999999984
No 96
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.69 E-value=1.4e-07 Score=82.95 Aligned_cols=77 Identities=19% Similarity=0.195 Sum_probs=61.9
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHc---CCCEEEEchHH
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALAL---GASGVFVGRPV 252 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~---GAd~V~ig~~~ 252 (308)
.+.++.+.+.|++.|.+++....+...+ ..++.+.++++.+ ++|||++|||++++|+.+++++ |||+|++||++
T Consensus 152 ~e~~~~~~~~G~~~i~~~~~~~~~~~~g-~~~~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al 228 (244)
T 2y88_A 152 WDVLERLDSEGCSRFVVTDITKDGTLGG-PNLDLLAGVADRT--DAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKAL 228 (244)
T ss_dssp HHHHHHHHHTTCCCEEEEETTTTTTTSC-CCHHHHHHHHTTC--SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHH
T ss_pred HHHHHHHHhCCCCEEEEEecCCccccCC-CCHHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHH
Confidence 5778999999999998876432111122 3678888887654 7999999999999999999998 99999999999
Q ss_pred HHh
Q 021739 253 PFS 255 (308)
Q Consensus 253 l~~ 255 (308)
+..
T Consensus 229 ~~~ 231 (244)
T 2y88_A 229 YAR 231 (244)
T ss_dssp HTT
T ss_pred HCC
Confidence 864
No 97
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=98.69 E-value=1e-07 Score=82.26 Aligned_cols=93 Identities=18% Similarity=0.105 Sum_probs=70.3
Q ss_pred cCHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCC
Q 021739 152 LNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR 231 (308)
Q Consensus 152 ~~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~ 231 (308)
.+.+.++..++ .+.|++.. +.|++++..+.+.|+|+|.++.. . ..+ ..+.+..++..+ .++|+++.|||.
T Consensus 92 ~d~~v~~~~~~-~g~~~i~G-~~t~~e~~~A~~~Gad~v~~fpa--~-~~g---G~~~lk~l~~~~-~~ipvvaiGGI~- 161 (207)
T 2yw3_A 92 LLEEVAALAQA-RGVPYLPG-VLTPTEVERALALGLSALKFFPA--E-PFQ---GVRVLRAYAEVF-PEVRFLPTGGIK- 161 (207)
T ss_dssp CCHHHHHHHHH-HTCCEEEE-ECSHHHHHHHHHTTCCEEEETTT--T-TTT---HHHHHHHHHHHC-TTCEEEEBSSCC-
T ss_pred CCHHHHHHHHH-hCCCEEec-CCCHHHHHHHHHCCCCEEEEecC--c-ccc---CHHHHHHHHhhC-CCCcEEEeCCCC-
Confidence 34455555555 68888875 77899999999999999998431 1 001 245566665544 379999999997
Q ss_pred HHHHHHHHHcCCCEEEEchHHHH
Q 021739 232 GTDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 232 ~~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
.+++.+++++||++|.+||.++.
T Consensus 162 ~~n~~~~l~aGa~~vavgSai~~ 184 (207)
T 2yw3_A 162 EEHLPHYAALPNLLAVGGSWLLQ 184 (207)
T ss_dssp GGGHHHHHTCSSBSCEEESGGGS
T ss_pred HHHHHHHHhCCCcEEEEehhhhC
Confidence 79999999999999999998764
No 98
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=98.68 E-value=8.5e-07 Score=79.54 Aligned_cols=100 Identities=19% Similarity=0.190 Sum_probs=69.3
Q ss_pred ccccCHHHHHHHHHhcCCCEEEEec-----CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccC
Q 021739 149 DRSLNWKDVKWLQTITSLPILVKGV-----LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKG 219 (308)
Q Consensus 149 d~~~~~~~i~~ir~~~~~Pv~vK~~-----~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~ 219 (308)
+.+...++|+++++.++-| .+|.+ ++.++ ++.+.++|+|+|..+.+.+.. ..-+.+...+.++.+....
T Consensus 156 ~~~~v~~eI~~V~~a~~~~-~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf~~~-GAT~edv~lmr~~v~~~g~ 233 (288)
T 3oa3_A 156 RYTDVFQDIRAVRLAAKDA-ILKVILETSQLTADEIIAGCVLSSLAGADYVKTSTGFNGP-GASIENVSLMSAVCDSLQS 233 (288)
T ss_dssp CHHHHHHHHHHHHHHTTTS-EEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSSSSC-CCCHHHHHHHHHHHHHSSS
T ss_pred cHHHHHHHHHHHHHHhcCC-CceEEEECCCCCHHHHHHHHHHHHHcCCCEEEcCCCCCCC-CCCHHHHHHHHHHHHHhCC
Confidence 3444567899999887766 46865 45555 677889999999976321110 0012234444544433346
Q ss_pred CCeEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 021739 220 RVPVFLDGGVRRGTDVFKALALGASGVFVGR 250 (308)
Q Consensus 220 ~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~ 250 (308)
+++|.++|||++.+|+.+++++||+.++..+
T Consensus 234 ~v~VKAAGGIrt~edAl~mi~aGA~RiGtS~ 264 (288)
T 3oa3_A 234 ETRVKASGGIRTIEDCVKMVRAGAERLGASA 264 (288)
T ss_dssp CCEEEEESSCCSHHHHHHHHHTTCSEEEESC
T ss_pred CceEEEeCCCCCHHHHHHHHHcCCceeehhh
Confidence 7999999999999999999999999776655
No 99
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.67 E-value=6.4e-08 Score=85.54 Aligned_cols=46 Identities=17% Similarity=0.247 Sum_probs=0.0
Q ss_pred HHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHh
Q 021739 208 MALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 208 ~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
+.+.++++.+ ++|||++|||++++|+.+++..|||+|++||+++.+
T Consensus 190 ~~~~~i~~~~--~iPvia~GGI~~~~d~~~~~~~Gad~v~vg~al~~~ 235 (247)
T 3tdn_A 190 EMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVEN 235 (247)
T ss_dssp ------------------------------------------------
T ss_pred HHHHHHHHhC--CCCEEEECCCCCHHHHHHHHHcCCcHhhccHHHHcC
Confidence 3444454443 799999999999999999999999999999998863
No 100
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=98.66 E-value=1.9e-07 Score=85.05 Aligned_cols=46 Identities=41% Similarity=0.588 Sum_probs=38.5
Q ss_pred HHHHHHHHHccCCCeE--EEecCCCCHHHHHHHHHcCCCEEEEchHHHHh
Q 021739 208 MALEEVVQAAKGRVPV--FLDGGVRRGTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 208 ~~l~~i~~~~~~~ipv--ia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
+.+.++.+.. ++|| ++.|||.|++|+.+++.+|||+|++||.++.+
T Consensus 230 ell~~i~~~~--~IPVV~VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~a 277 (330)
T 2yzr_A 230 EVLLEVKKLG--RLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFKS 277 (330)
T ss_dssp HHHHHHHHHT--SCSSEEEECSCCCSHHHHHHHHHTTCSCEEESHHHHTS
T ss_pred HHHHHHHHhC--CCCeEEEEECCCCCHHHHHHHHHcCcCEEeeHHHHhcC
Confidence 4455555443 6888 69999999999999999999999999999864
No 101
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.64 E-value=2.3e-07 Score=81.61 Aligned_cols=77 Identities=23% Similarity=0.281 Sum_probs=60.1
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHc---CCCEEEEchHH
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALAL---GASGVFVGRPV 252 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~---GAd~V~ig~~~ 252 (308)
.+.++.+.+.|+|.|.+++...... .....++.+.++++.+ ++||+++|||++++|+.+++++ |||+|++||++
T Consensus 149 ~e~~~~~~~~G~~~i~~~~~~~~~~-~~g~~~~~~~~i~~~~--~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~al 225 (244)
T 1vzw_A 149 YETLDRLNKEGCARYVVTDIAKDGT-LQGPNLELLKNVCAAT--DRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKAL 225 (244)
T ss_dssp HHHHHHHHHTTCCCEEEEEC--------CCCHHHHHHHHHTC--SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHH
T ss_pred HHHHHHHHhCCCCEEEEeccCcccc-cCCCCHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHhhccCCCceeeeeHHH
Confidence 4567999999999998875321111 1123678888887765 7999999999999999999998 99999999999
Q ss_pred HHh
Q 021739 253 PFS 255 (308)
Q Consensus 253 l~~ 255 (308)
+.+
T Consensus 226 ~~~ 228 (244)
T 1vzw_A 226 YAK 228 (244)
T ss_dssp HTT
T ss_pred HcC
Confidence 864
No 102
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.63 E-value=4.8e-07 Score=80.43 Aligned_cols=101 Identities=15% Similarity=0.146 Sum_probs=71.2
Q ss_pred HHHHHHHHHhcCCCEEEEec-CCHHHHHHHHHcCCcEEEEeccc---------------cc-------------------
Q 021739 154 WKDVKWLQTITSLPILVKGV-LTAEDASLAIQYGAAGIIVSNHG---------------AR------------------- 198 (308)
Q Consensus 154 ~~~i~~ir~~~~~Pv~vK~~-~~~e~a~~~~~~G~d~i~v~~~g---------------g~------------------- 198 (308)
.+.++.+++.+++||..|.. .+..++..+.++|||+|.+...- |.
T Consensus 95 ~~~l~~i~~~v~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l~~~l~~l~~~a~~lGl~~lvev~~~~E~~~a~~~g 174 (254)
T 1vc4_A 95 LLDLKRVREAVDLPLLRKDFVVDPFMLEEARAFGASAALLIVALLGELTGAYLEEARRLGLEALVEVHTERELEIALEAG 174 (254)
T ss_dssp HHHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHHGGGHHHHHHHHHHHTCEEEEEECSHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCEEECCcCCCHHHHHHHHHcCCCEEEECccchHHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcC
Confidence 46778888888888888865 56667777888888888874310 00
Q ss_pred ---------CCCCCcchHHHHHHHHHHccC---CCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHh
Q 021739 199 ---------QLDYVPATVMALEEVVQAAKG---RVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 199 ---------~~~~~~~~~~~l~~i~~~~~~---~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
......+.++.+.++.+.+.. ++|+++.|||+|++|+.++.. ||++|.+|++++.+
T Consensus 175 ad~IGvn~~~l~~~~~dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~-Ga~gvlVGsAl~~~ 242 (254)
T 1vc4_A 175 AEVLGINNRDLATLHINLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-LFDAVLIGTSLMRA 242 (254)
T ss_dssp CSEEEEESBCTTTCCBCTTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT-TCSEEEECHHHHTS
T ss_pred CCEEEEccccCcCCCCCHHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc-CCCEEEEeHHHcCC
Confidence 000011223344444444432 689999999999999999999 99999999999974
No 103
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=98.63 E-value=6.6e-07 Score=84.70 Aligned_cols=149 Identities=15% Similarity=0.066 Sum_probs=83.5
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHH
Q 021739 78 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 157 (308)
Q Consensus 78 ~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 157 (308)
+.+..++++++|||+|.|+.. +|+-. +.|--| ..+.|+ + +..|+ . +.-..+..|+|
T Consensus 174 F~~AA~rA~~AGFDgVEIH~A---hGYLl----~QFLSp-~tN~Rt-D--------eYGGS----~---ENR~Rf~lEVi 229 (400)
T 4gbu_A 174 YVQAAKNSIAAGADGVEIHSA---NGYLL----NQFLDP-HSNTRT-D--------EYGGS----I---ENRARFTLEVV 229 (400)
T ss_dssp HHHHHHHHHHTTCSEEEEECC---TTSHH----HHHHCT-TTCCCC-S--------TTSSS----H---HHHTHHHHHHH
T ss_pred HHHHHHHHHhcCcCeeeeccc---ccchH----HheecC-cCCCCc-c--------ccCCc----H---HHHHHHHHHHH
Confidence 445567788899999999853 23322 223222 111110 0 11111 1 11234568999
Q ss_pred HHHHHhc-CCCEEEEecCC--------------H----HHHHHHHHc-----CCcEEEEecccccC--CC-----CCcch
Q 021739 158 KWLQTIT-SLPILVKGVLT--------------A----EDASLAIQY-----GAAGIIVSNHGARQ--LD-----YVPAT 206 (308)
Q Consensus 158 ~~ir~~~-~~Pv~vK~~~~--------------~----e~a~~~~~~-----G~d~i~v~~~gg~~--~~-----~~~~~ 206 (308)
++||+.+ +-||.+|+... . +.+..+... ..+++.++...... .. .....
T Consensus 230 ~aVr~~vg~d~vgvRlS~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (400)
T 4gbu_A 230 DALVEAIGHEKVGLRLSPYGVFNSMSGGAETGIVAQYAYVAGELEKRAKAGKRLAFVHLVEPRVTNPFLTEGEGEYEGGS 309 (400)
T ss_dssp HHHHHHHCGGGEEEEECTTCCTTTCCGGGSTTHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTCSSTTSCTTTTCCCSCC
T ss_pred HHHHHHcCCCcEEEEeccccccCCCCccchhhhHHHHHHHHHHHHHhhccCccccceeeecccCCCcccccccchhhhHH
Confidence 9999987 35899998521 1 112333332 23455544321100 00 00111
Q ss_pred HHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHc-CCCEEEEchHHHHh
Q 021739 207 VMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALAL-GASGVFVGRPVPFS 255 (308)
Q Consensus 207 ~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~-GAd~V~ig~~~l~~ 255 (308)
. ..+++.+ ++|||++|||.+..++.+.+.. +||+|.+||++|..
T Consensus 310 ~---~~ir~~~--~~pvi~~G~~~~~~~~~~~~~~~~aDlV~~gR~~iad 354 (400)
T 4gbu_A 310 N---DFVYSIW--KGPVIRAGNFALHPEVVREEVKDKRTLIGYGRFFISN 354 (400)
T ss_dssp S---THHHHHC--CSCEEEESSCTTCHHHHHHHTTSTTEEEECCHHHHHC
T ss_pred H---HHHHHHh--CCCEEEeCCCCChHHHHHHHHcCCCeEhHHHHHHHHC
Confidence 1 2234444 7899999999998888887775 59999999999974
No 104
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=98.60 E-value=1.4e-07 Score=81.47 Aligned_cols=168 Identities=16% Similarity=0.068 Sum_probs=113.5
Q ss_pred eeecCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhc
Q 021739 69 LYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQI 148 (308)
Q Consensus 69 l~~~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (308)
+....|++...++.+.+.+.|++.+.+++.+|..-.-.+.++..|... .+..+++.. ....+.....+++..++
T Consensus 18 Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~-~IGAGTVlt--~~~a~~ai~AGA~fivs--- 91 (217)
T 3lab_A 18 VIVIDDLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEA-IVGAGTVCT--ADDFQKAIDAGAQFIVS--- 91 (217)
T ss_dssp EECCSCGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTS-EEEEECCCS--HHHHHHHHHHTCSEEEE---
T ss_pred EEEcCCHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCC-eEeeccccC--HHHHHHHHHcCCCEEEe---
Confidence 343778999999999999999999999999886544567777777322 233332221 11111111123333443
Q ss_pred ccccCHHHHHHHHHhcCC------CEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCe
Q 021739 149 DRSLNWKDVKWLQTITSL------PILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVP 222 (308)
Q Consensus 149 d~~~~~~~i~~ir~~~~~------Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 222 (308)
|.++.+.++..++ .++ |++- ++.|++++..+.++|+|.|.++-.. . .+ ....++.++..+ .++|
T Consensus 92 -P~~~~evi~~~~~-~~v~~~~~~~~~P-G~~TptE~~~A~~~Gad~vK~FPa~--~-~g---G~~~lkal~~p~-p~i~ 161 (217)
T 3lab_A 92 -PGLTPELIEKAKQ-VKLDGQWQGVFLP-GVATASEVMIAAQAGITQLKCFPAS--A-IG---GAKLLKAWSGPF-PDIQ 161 (217)
T ss_dssp -SSCCHHHHHHHHH-HHHHCSCCCEEEE-EECSHHHHHHHHHTTCCEEEETTTT--T-TT---HHHHHHHHHTTC-TTCE
T ss_pred -CCCcHHHHHHHHH-cCCCccCCCeEeC-CCCCHHHHHHHHHcCCCEEEECccc--c-cc---CHHHHHHHHhhh-cCce
Confidence 4455677777665 356 7765 6799999999999999999986421 0 01 245666665444 4799
Q ss_pred EEEecCCCCHHHHHHHHHcCCCEEEEchHHH
Q 021739 223 VFLDGGVRRGTDVFKALALGASGVFVGRPVP 253 (308)
Q Consensus 223 via~GGI~~~~d~~k~l~~GAd~V~ig~~~l 253 (308)
+++.|||. ++++.+++++|+.++..|+.+.
T Consensus 162 ~~ptGGI~-~~N~~~~l~aGa~~~vgGs~l~ 191 (217)
T 3lab_A 162 FCPTGGIS-KDNYKEYLGLPNVICAGGSWLT 191 (217)
T ss_dssp EEEBSSCC-TTTHHHHHHSTTBCCEEESGGG
T ss_pred EEEeCCCC-HHHHHHHHHCCCEEEEEChhhc
Confidence 99999998 8999999999998887665443
No 105
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.60 E-value=5e-07 Score=78.36 Aligned_cols=96 Identities=21% Similarity=0.124 Sum_probs=67.9
Q ss_pred HHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCC-C-CcchHHHHHHHHHHccCCCeEEEecCCCC
Q 021739 154 WKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLD-Y-VPATVMALEEVVQAAKGRVPVFLDGGVRR 231 (308)
Q Consensus 154 ~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~-~-~~~~~~~l~~i~~~~~~~ipvia~GGI~~ 231 (308)
.+.+++++. ++.+.+ .+.+.+++..+.+.|+|+|.+++...++.. + .+..++.+.++.+.. ++|+++.||| +
T Consensus 101 ~~~~~~~~~--~~~ig~-sv~t~~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~--~~pvia~GGI-~ 174 (221)
T 1yad_A 101 PKQIRARFP--HLHIGR-SVHSLEEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRI--SIPVIAIGGM-T 174 (221)
T ss_dssp HHHHHHHCT--TCEEEE-EECSHHHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHC--CSCEEEESSC-C
T ss_pred HHHHHHHCC--CCEEEE-EcCCHHHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhC--CCCEEEECCC-C
Confidence 344555432 344443 236889999999999999988653222211 1 133567777776655 7999999999 9
Q ss_pred HHHHHHHHHcCCCEEEEchHHHHh
Q 021739 232 GTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 232 ~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
++++.+++++||++|.+|+.++..
T Consensus 175 ~~nv~~~~~~Ga~gv~vgs~i~~~ 198 (221)
T 1yad_A 175 PDRLRDVKQAGADGIAVMSGIFSS 198 (221)
T ss_dssp GGGHHHHHHTTCSEEEESHHHHTS
T ss_pred HHHHHHHHHcCCCEEEEhHHhhCC
Confidence 999999999999999999998753
No 106
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=98.58 E-value=1.9e-06 Score=76.20 Aligned_cols=98 Identities=18% Similarity=0.152 Sum_probs=71.2
Q ss_pred ccccCHHHHHHHHHhcCCCEEEEec-----CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccC
Q 021739 149 DRSLNWKDVKWLQTITSLPILVKGV-----LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKG 219 (308)
Q Consensus 149 d~~~~~~~i~~ir~~~~~Pv~vK~~-----~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~ 219 (308)
+.+...+.|+++++..+ ...+|.+ ++.++ ++.+.++|+|+|..|...+ .+..+.+.+...++.+++
T Consensus 141 ~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf~----~~GAT~edV~lm~~~vg~ 215 (260)
T 3r12_A 141 EWEYVYEDIRSVVESVK-GKVVKVIIETCYLDTEEKIAACVISKLAGAHFVKTSTGFG----TGGATAEDVHLMKWIVGD 215 (260)
T ss_dssp CHHHHHHHHHHHHHHTT-TSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSSS----SCCCCHHHHHHHHHHHCT
T ss_pred cHHHHHHHHHHHHHhcC-CCcEEEEEeCCCCCHHHHHHHHHHHHHhCcCEEEcCCCCC----CCCCCHHHHHHHHHHhCC
Confidence 44445678888988764 3345865 45444 4677899999999763211 233466666666666677
Q ss_pred CCeEEEecCCCCHHHHHHHHHcCCCEEEEchH
Q 021739 220 RVPVFLDGGVRRGTDVFKALALGASGVFVGRP 251 (308)
Q Consensus 220 ~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~ 251 (308)
+++|-++|||++.+|+.+++++||+.++..+.
T Consensus 216 ~v~VKaAGGIrt~~~al~mi~aGA~RiGtS~g 247 (260)
T 3r12_A 216 EMGVKASGGIRTFEDAVKMIMYGADRIGTSSG 247 (260)
T ss_dssp TSEEEEESSCCSHHHHHHHHHTTCSEEEESCH
T ss_pred CceEEEeCCCCCHHHHHHHHHcCCceeecchH
Confidence 89999999999999999999999998766553
No 107
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=98.55 E-value=2.3e-06 Score=74.69 Aligned_cols=98 Identities=20% Similarity=0.150 Sum_probs=71.4
Q ss_pred ccccCHHHHHHHHHhcCCCEEEEec-----C----CHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHH
Q 021739 149 DRSLNWKDVKWLQTITSLPILVKGV-----L----TAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQ 215 (308)
Q Consensus 149 d~~~~~~~i~~ir~~~~~Pv~vK~~-----~----~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~ 215 (308)
+.+...++|+.+++.++ ...+|.+ + +.++ ++.+.++|+|+|..|...+ ..+..+.+.+...++
T Consensus 110 ~~~~v~~ei~~v~~a~~-~~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGADfVKTSTGf~---~~~gAt~edv~lm~~ 185 (231)
T 3ndo_A 110 DLDAVSADITAVRKAVR-AATLKVIVESAALLEFSGEPLLADVCRVARDAGADFVKTSTGFH---PSGGASVQAVEIMAR 185 (231)
T ss_dssp CHHHHHHHHHHHHHHTT-TSEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCSEEECCCSCC---TTCSCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcc-CCceEEEEECcccCCCCCHHHHHHHHHHHHHHCcCEEEcCCCCC---CCCCCCHHHHHHHHH
Confidence 44445678899988875 3345865 4 5544 4667889999998764211 013356677766666
Q ss_pred HccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 021739 216 AAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGR 250 (308)
Q Consensus 216 ~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~ 250 (308)
.++.+++|-++||||+.+|+.+++++||+.++..+
T Consensus 186 ~v~~~v~VKaaGGIrt~~~a~~~i~aGa~RiGtS~ 220 (231)
T 3ndo_A 186 TVGERLGVKASGGIRTAEQAAAMLDAGATRLGLSG 220 (231)
T ss_dssp HHTTTSEEEEESSCCSHHHHHHHHHTTCSEEEESS
T ss_pred HhCCCceEEEeCCCCCHHHHHHHHHhcchhcccch
Confidence 67778999999999999999999999999776655
No 108
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.55 E-value=1.4e-06 Score=74.72 Aligned_cols=95 Identities=16% Similarity=0.182 Sum_probs=66.8
Q ss_pred HHHHHHHhcCCCEEEEe--cCCH-HHHHHHHHcCCcEEEEeccc-ccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCC
Q 021739 156 DVKWLQTITSLPILVKG--VLTA-EDASLAIQYGAAGIIVSNHG-ARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR 231 (308)
Q Consensus 156 ~i~~ir~~~~~Pv~vK~--~~~~-e~a~~~~~~G~d~i~v~~~g-g~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~ 231 (308)
.++.+++ .++++++-. ..++ +.++.+.+.|+|+|.+.... |.. ..+...+.+.++++.+ .++|++++|||+
T Consensus 95 ~~~~~~~-~g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g~~g~~--~~~~~~~~i~~l~~~~-~~~~i~~~gGI~- 169 (211)
T 3f4w_A 95 CIRAAKE-AGKQVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQA--AGRKPIDDLITMLKVR-RKARIAVAGGIS- 169 (211)
T ss_dssp HHHHHHH-HTCEEEEECTTCSSHHHHHHHHHHHTCCEEEEECCHHHHH--TTCCSHHHHHHHHHHC-SSCEEEEESSCC-
T ss_pred HHHHHHH-cCCeEEEEecCCCCHHHHHHHHHHcCCCEEEEcCCCcccc--cCCCCHHHHHHHHHHc-CCCcEEEECCCC-
Confidence 3444544 366666532 2343 66899999999999875321 111 1123466777777654 369999999996
Q ss_pred HHHHHHHHHcCCCEEEEchHHHHh
Q 021739 232 GTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 232 ~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
++++.+++.+|||.|.+||+++.+
T Consensus 170 ~~~~~~~~~~Gad~vvvGsai~~~ 193 (211)
T 3f4w_A 170 SQTVKDYALLGPDVVIVGSAITHA 193 (211)
T ss_dssp TTTHHHHHTTCCSEEEECHHHHTC
T ss_pred HHHHHHHHHcCCCEEEECHHHcCC
Confidence 999999999999999999998864
No 109
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=98.52 E-value=5.5e-06 Score=72.38 Aligned_cols=159 Identities=17% Similarity=0.122 Sum_probs=105.7
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
..|...+.+.++++++.|++.+-+.+- .. .|. | +-.
T Consensus 13 ~~D~~~l~~~i~~l~~~g~d~~h~DVm-Dg----------~Fv-p--------------------------------n~~ 48 (228)
T 3ovp_A 13 NSDLANLGAECLRMLDSGADYLHLDVM-DG----------HFV-P--------------------------------NIT 48 (228)
T ss_dssp TSCGGGHHHHHHHHHHTTCSCEEEEEE-BS----------SSS-S--------------------------------CBC
T ss_pred eCCchhHHHHHHHHHHcCCCEEEEEec-CC----------CcC-c--------------------------------ccc
Confidence 357777888999999999997655431 00 010 0 112
Q ss_pred cCHHHHHHHHHh--cCCCEEEEec-CCHH-HHHHHHHcCCcEEEEecccc------------------------cC----
Q 021739 152 LNWKDVKWLQTI--TSLPILVKGV-LTAE-DASLAIQYGAAGIIVSNHGA------------------------RQ---- 199 (308)
Q Consensus 152 ~~~~~i~~ir~~--~~~Pv~vK~~-~~~e-~a~~~~~~G~d~i~v~~~gg------------------------~~---- 199 (308)
+..+.++++|+. .++|+-++.- .+++ .++.+.++|+|.|+++.... +.
T Consensus 49 ~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~t~~e~l 128 (228)
T 3ovp_A 49 FGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYL 128 (228)
T ss_dssp BCHHHHHHHHHHHCSSSCEEEEEECSCGGGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTTSCGGGT
T ss_pred cCHHHHHHHHHhhCCCCcEEEEEEeCCHHHHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCCCCHHHH
Confidence 335788999988 5889888764 3443 46788899999999975211 00
Q ss_pred ------CC-----------CC----cchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHhccc
Q 021739 200 ------LD-----------YV----PATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAV 258 (308)
Q Consensus 200 ------~~-----------~~----~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~~~~ 258 (308)
.+ ++ +...+-+.++++.. .++++.++|||+ ++.+.++..+|||.+.+||+++.+
T Consensus 129 ~~~l~~~D~Vl~msv~pGf~Gq~f~~~~l~ki~~lr~~~-~~~~I~VdGGI~-~~t~~~~~~aGAd~~VvGsaIf~a--- 203 (228)
T 3ovp_A 129 APWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF-PSLDIEVDGGVG-PDTVHKCAEAGANMIVSGSAIMRS--- 203 (228)
T ss_dssp GGGGGGCSEEEEESSCTTTCSCCCCGGGHHHHHHHHHHC-TTCEEEEESSCS-TTTHHHHHHHTCCEEEESHHHHTC---
T ss_pred HHHhccCCeEEEeeecCCCCCcccCHHHHHHHHHHHHhc-CCCCEEEeCCcC-HHHHHHHHHcCCCEEEEeHHHhCC---
Confidence 00 11 23455566666543 368999999995 899999999999999999988753
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHc
Q 021739 259 DGEAGVRKVLQMLRDEFELTMALS 282 (308)
Q Consensus 259 ~G~~~v~~~i~~l~~~l~~~m~~~ 282 (308)
..+ .+.++.+++.++..+...
T Consensus 204 ~dp---~~~~~~l~~~~~~~~~~~ 224 (228)
T 3ovp_A 204 EDP---RSVINLLRNVCSEAAQKR 224 (228)
T ss_dssp SCH---HHHHHHHHHHHHHHHHHC
T ss_pred CCH---HHHHHHHHHHHHHHHhhc
Confidence 223 345666777776666543
No 110
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=98.51 E-value=8e-07 Score=77.50 Aligned_cols=166 Identities=14% Similarity=0.105 Sum_probs=97.6
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
..+.+...+.++.+.+.|++.+.++...+..-...+.++..|. ...+..+++. ..+..+.....++...+. |.
T Consensus 25 ~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~-~l~vgaGtvl--~~d~~~~A~~aGAd~v~~----p~ 97 (224)
T 1vhc_A 25 LDNADDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRP-DFLIAAGTVL--TAEQVVLAKSSGADFVVT----PG 97 (224)
T ss_dssp CSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCT-TCEEEEESCC--SHHHHHHHHHHTCSEEEC----SS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhCc-CcEEeeCcEe--eHHHHHHHHHCCCCEEEE----CC
Confidence 4455656666666666777777777654432222344444441 1111111110 000000000011111222 23
Q ss_pred cCHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCC
Q 021739 152 LNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR 231 (308)
Q Consensus 152 ~~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~ 231 (308)
.+.+.++..++ .+.|+++. +.|++++..+.+.|+|+|.++.. . .....+.+.+++..+ .++|+++.|||.
T Consensus 98 ~d~~v~~~ar~-~g~~~i~G-v~t~~e~~~A~~~Gad~vk~Fpa--~----~~gG~~~lk~l~~~~-~~ipvvaiGGI~- 167 (224)
T 1vhc_A 98 LNPKIVKLCQD-LNFPITPG-VNNPMAIEIALEMGISAVKFFPA--E----ASGGVKMIKALLGPY-AQLQIMPTGGIG- 167 (224)
T ss_dssp CCHHHHHHHHH-TTCCEECE-ECSHHHHHHHHHTTCCEEEETTT--T----TTTHHHHHHHHHTTT-TTCEEEEBSSCC-
T ss_pred CCHHHHHHHHH-hCCCEEec-cCCHHHHHHHHHCCCCEEEEeeC--c----cccCHHHHHHHHhhC-CCCeEEEECCcC-
Confidence 44566777777 78888775 78999999999999999998431 0 011245666665544 369999999995
Q ss_pred HHHHHHHHHc-CCCEEEEchHHHHh
Q 021739 232 GTDVFKALAL-GASGVFVGRPVPFS 255 (308)
Q Consensus 232 ~~d~~k~l~~-GAd~V~ig~~~l~~ 255 (308)
.+++.+.+.+ |+++|. |+.+..+
T Consensus 168 ~~N~~~~l~agga~~v~-gS~i~~~ 191 (224)
T 1vhc_A 168 LHNIRDYLAIPNIVACG-GSWFVEK 191 (224)
T ss_dssp TTTHHHHHTSTTBCCEE-ECGGGCH
T ss_pred HHHHHHHHhcCCCEEEE-EchhcCc
Confidence 6899999998 899999 8877643
No 111
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.51 E-value=6.2e-07 Score=78.63 Aligned_cols=77 Identities=23% Similarity=0.324 Sum_probs=61.4
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHh
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
.+.++.+.+.|+|+|.+.+........+ ..++.+.++++.. ++||+++|||++.+|+.+++++|||+|++||.++..
T Consensus 157 ~e~~~~~~~~G~d~i~~~~~~~~g~~~~-~~~~~i~~l~~~~--~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~~ 233 (253)
T 1h5y_A 157 VKWAKEVEELGAGEILLTSIDRDGTGLG-YDVELIRRVADSV--RIPVIASGGAGRVEHFYEAAAAGADAVLAASLFHFR 233 (253)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTTCSC-CCHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTT
T ss_pred HHHHHHHHhCCCCEEEEecccCCCCcCc-CCHHHHHHHHHhc--CCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHcC
Confidence 4668899999999999875432111112 3577788887765 799999999999999999999999999999999864
No 112
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=98.50 E-value=3.5e-07 Score=87.48 Aligned_cols=129 Identities=16% Similarity=0.180 Sum_probs=91.9
Q ss_pred CHHHHHHHHHhcCCCEEEEec-CCHHHHHHHHHcCCcEEEEecccc----------------------------------
Q 021739 153 NWKDVKWLQTITSLPILVKGV-LTAEDASLAIQYGAAGIIVSNHGA---------------------------------- 197 (308)
Q Consensus 153 ~~~~i~~ir~~~~~Pv~vK~~-~~~e~a~~~~~~G~d~i~v~~~gg---------------------------------- 197 (308)
+.+.|+.+|+.+++||+.|.. .++.+...+..+|||+|.+...-.
T Consensus 96 s~~dL~~vr~~v~lPvLrKDFI~d~~Qi~ea~~~GAD~ILLi~a~l~~~~l~~l~~~a~~lgm~~LvEvh~~eE~~~A~~ 175 (452)
T 1pii_A 96 SFNFLPIVSQIAPQPILCKDFIIDPYQIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTEVSNEEEQERAIA 175 (452)
T ss_dssp CTTHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEETTTCCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCeEEEeccCCHHHHHHHHHcCCCEEEEEcccCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH
Confidence 468899999999999999975 456667778899999998754210
Q ss_pred ----------cCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHhcccCCHHHHHHH
Q 021739 198 ----------RQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKV 267 (308)
Q Consensus 198 ----------~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~~~~~G~~~v~~~ 267 (308)
+.+.....+++...++.+.++.++++|+.|||+|++|+.++..+ |++|.+|+.++.. ... .+.
T Consensus 176 lga~iIGinnr~L~t~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVGealmr~---~d~---~~~ 248 (452)
T 1pii_A 176 LGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHF-ANGFLIGSALMAH---DDL---HAA 248 (452)
T ss_dssp TTCSEEEEESEETTTTEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT-CSEEEECHHHHTC---SCH---HHH
T ss_pred CCCCEEEEeCCCCCCCCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh-CCEEEEcHHHcCC---cCH---HHH
Confidence 00111123455556666666667899999999999999999999 9999999999975 111 233
Q ss_pred HHHHHHHHHHHHHHcCCCCHhhhc
Q 021739 268 LQMLRDEFELTMALSGCRSLKEIT 291 (308)
Q Consensus 268 i~~l~~~l~~~m~~~G~~~i~~l~ 291 (308)
++.|.. .....||.++.++.+
T Consensus 249 ~~~l~~---~~~KICGit~~eda~ 269 (452)
T 1pii_A 249 VRRVLL---GENKVCGLTRGQDAK 269 (452)
T ss_dssp HHHHHH---CSCEECCCCSHHHHH
T ss_pred HHHHHH---HhccccCCCcHHHHH
Confidence 333332 235678888877764
No 113
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.50 E-value=6e-07 Score=79.20 Aligned_cols=77 Identities=22% Similarity=0.283 Sum_probs=62.8
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHh
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
.+.++.+.+.|++.|.++..+......+ +.++.+.++++.+ ++|||++|||++++|+.+++.+|||+|++|++++.+
T Consensus 155 ~e~~~~~~~~G~~~i~~~~~~~~g~~~g-~~~~~i~~l~~~~--~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal~~~ 231 (252)
T 1ka9_F 155 VEWAVKGVELGAGEILLTSMDRDGTKEG-YDLRLTRMVAEAV--GVPVIASGGAGRMEHFLEAFQAGAEAALAASVFHFG 231 (252)
T ss_dssp HHHHHHHHHHTCCEEEEEETTTTTTCSC-CCHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTT
T ss_pred HHHHHHHHHcCCCEEEEecccCCCCcCC-CCHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHHHcC
Confidence 5778999999999998864332222223 3688888888776 799999999999999999999999999999999864
No 114
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.49 E-value=3.2e-07 Score=81.68 Aligned_cols=77 Identities=14% Similarity=0.180 Sum_probs=59.9
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHh
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
.+.++.+.+.|++.|.+++........+ +.++.+.++++.+ ++|||++|||++++|+.+++.+|||+|++|++++..
T Consensus 159 ~e~~~~~~~~G~~~i~~t~~~~~g~~~g-~~~~~i~~l~~~~--~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~~ 235 (266)
T 2w6r_A 159 RDWVVEVEKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFR 235 (266)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTTCSC-CCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC--
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCC-CCHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHcC
Confidence 4567899999999999865332111222 3577788777655 799999999999999999999999999999998764
No 115
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=98.49 E-value=7.7e-07 Score=77.08 Aligned_cols=165 Identities=15% Similarity=0.124 Sum_probs=100.2
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
..+.+...+.++.+.+.|++.+.++...|..-...+.++..|.. ..+..+++- ..+..+.....++...+.+ .
T Consensus 24 ~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~-~~vgagtvi--~~d~~~~A~~aGAd~v~~p----~ 96 (214)
T 1wbh_A 24 VKKLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPE-AIVGAGTVL--NPQQLAEVTEAGAQFAISP----G 96 (214)
T ss_dssp CSSGGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCTT-SEEEEESCC--SHHHHHHHHHHTCSCEEES----S
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCcC-CEEeeCEEE--EHHHHHHHHHcCCCEEEcC----C
Confidence 55677777788888888888888887665432234555555521 111111110 0000000000111112222 2
Q ss_pred cCHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCC
Q 021739 152 LNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR 231 (308)
Q Consensus 152 ~~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~ 231 (308)
.+.+.+ +.++..+.|++.. +.|++++..+.+.|+|+|.++.. .. ....+.+..++..+ .++|+++.|||.
T Consensus 97 ~d~~v~-~~~~~~g~~~i~G-~~t~~e~~~A~~~Gad~v~~Fpa--~~----~gG~~~lk~i~~~~-~~ipvvaiGGI~- 166 (214)
T 1wbh_A 97 LTEPLL-KAATEGTIPLIPG-ISTVSELMLGMDYGLKEFKFFPA--EA----NGGVKALQAIAGPF-SQVRFCPTGGIS- 166 (214)
T ss_dssp CCHHHH-HHHHHSSSCEEEE-ESSHHHHHHHHHTTCCEEEETTT--TT----TTHHHHHHHHHTTC-TTCEEEEBSSCC-
T ss_pred CCHHHH-HHHHHhCCCEEEe-cCCHHHHHHHHHCCCCEEEEecC--cc----ccCHHHHHHHhhhC-CCCeEEEECCCC-
Confidence 233444 4444578888875 78899999999999999998431 10 01245666665444 369999999995
Q ss_pred HHHHHHHHHc-CCCEEEEchHHHH
Q 021739 232 GTDVFKALAL-GASGVFVGRPVPF 254 (308)
Q Consensus 232 ~~d~~k~l~~-GAd~V~ig~~~l~ 254 (308)
.+++.+.+.+ |+++|. ||.+..
T Consensus 167 ~~n~~~~l~agg~~~v~-gS~i~~ 189 (214)
T 1wbh_A 167 PANYRDYLALKSVLCIG-GSWLVP 189 (214)
T ss_dssp TTTHHHHHTSTTBSCEE-EGGGSC
T ss_pred HHHHHHHHhcCCCeEEE-eccccC
Confidence 6899999998 899999 887764
No 116
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.48 E-value=4.5e-07 Score=79.66 Aligned_cols=76 Identities=20% Similarity=0.216 Sum_probs=62.0
Q ss_pred HHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHc-----C-CCEEEEch
Q 021739 177 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALAL-----G-ASGVFVGR 250 (308)
Q Consensus 177 e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~-----G-Ad~V~ig~ 250 (308)
+.++.+.+.|++.|.+++....+...+ +.++.+.++++.+ ++|||++|||++++|+.++++. | ||+|++|+
T Consensus 148 e~~~~~~~~G~~~i~~t~~~~~g~~~g-~~~~~i~~l~~~~--~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgs 224 (241)
T 1qo2_A 148 SLLKRLKEYGLEEIVHTEIEKDGTLQE-HDFSLTKKIAIEA--EVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGR 224 (241)
T ss_dssp HHHHHHHTTTCCEEEEEETTHHHHTCC-CCHHHHHHHHHHH--TCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECH
T ss_pred HHHHHHHhCCCCEEEEEeecccccCCc-CCHHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeH
Confidence 557889999999999876432111122 3688888888776 8999999999999999999998 9 99999999
Q ss_pred HHHHh
Q 021739 251 PVPFS 255 (308)
Q Consensus 251 ~~l~~ 255 (308)
+++.+
T Consensus 225 al~~~ 229 (241)
T 1qo2_A 225 AFLEG 229 (241)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 99874
No 117
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=98.47 E-value=2.2e-05 Score=69.84 Aligned_cols=197 Identities=13% Similarity=0.158 Sum_probs=117.4
Q ss_pred HHHHHHHcCCceeecCCC---------CC----C-----------HHHHhccCCC-CceEEeeecCCc-hHHHHHHHHHH
Q 021739 33 TARAASAAGTIMTLSSWA---------TS----S-----------VEEVSSTGPG-IRFFQLYVTKHR-NVDAQLVKRAE 86 (308)
Q Consensus 33 ~a~~a~~~g~~~~~s~~~---------~~----~-----------~e~i~~~~~~-~~~~Ql~~~~d~-~~~~~~~~~~~ 86 (308)
.|+.+.+-|+.+.+.--| +. + -+|+.+...+ |.+.|+. +.|| ..+...++.++
T Consensus 40 sAk~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~e~~~evlp~v~~iPV~Agv~-~~DP~~~~g~~Le~lk 118 (286)
T 2p10_A 40 SAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVVRHTPVLAGVN-GTDPFMVMSTFLRELK 118 (286)
T ss_dssp HHHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCSSSCEEEEEC-TTCTTCCHHHHHHHHH
T ss_pred hhHHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHHHHHHhhhccCCCCCEEEEEC-CcCCCcCHHHHHHHHH
Confidence 488999999998874211 11 0 1245555444 8899966 6776 46777778899
Q ss_pred HcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccC----HHHHHHHHH
Q 021739 87 RAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN----WKDVKWLQT 162 (308)
Q Consensus 87 ~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~~i~~ir~ 162 (308)
++|+.++ +| .|..+.-.-.. ...+- ..... .+.|+..++
T Consensus 119 ~~Gf~Gv-~N--~ptvglidG~f-------------------------------r~~LE---E~gm~~~~eve~I~~A~~ 161 (286)
T 2p10_A 119 EIGFAGV-QN--FPTVGLIDGLF-------------------------------RQNLE---ETGMSYAQEVEMIAEAHK 161 (286)
T ss_dssp HHTCCEE-EE--CSCGGGCCHHH-------------------------------HHHHH---HTTCCHHHHHHHHHHHHH
T ss_pred HhCCceE-EE--CCCcccccchh-------------------------------hhhHh---hcCCCHHHHHHHHHHHHH
Confidence 9999998 66 46432110000 00110 11222 233444444
Q ss_pred hcCCCEEEEecCCHHHHHHHHHcCCcEEEEecc---cccC-CCCCcc--h-HHHHHHH---HHHccCCCeEEEec-CCCC
Q 021739 163 ITSLPILVKGVLTAEDASLAIQYGAAGIIVSNH---GARQ-LDYVPA--T-VMALEEV---VQAAKGRVPVFLDG-GVRR 231 (308)
Q Consensus 163 ~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~---gg~~-~~~~~~--~-~~~l~~i---~~~~~~~ipvia~G-GI~~ 231 (308)
. ++ +.+-.+.++++++.+.++|+|.|.+... ++.- .....+ . .+.+.++ .+.+.+++.|+.-| ||.+
T Consensus 162 ~-gL-~Ti~~v~~~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIst 239 (286)
T 2p10_A 162 L-DL-LTTPYVFSPEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIAN 239 (286)
T ss_dssp T-TC-EECCEECSHHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCS
T ss_pred C-CC-eEEEecCCHHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCC
Confidence 2 22 2223458999999999999999998653 1110 011111 1 2233333 33444566666665 9999
Q ss_pred HHHHHHHHHc--CCCEEEEchHHHHhcccCCHHHHHHHHHHHHHHHH
Q 021739 232 GTDVFKALAL--GASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFE 276 (308)
Q Consensus 232 ~~d~~k~l~~--GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~l~ 276 (308)
++|+..++.+ |++.+..+|.+.+. + .++.+..+.+.++
T Consensus 240 peDv~~~l~~t~G~~G~~gASsier~------p-~e~ai~~~~~~fk 279 (286)
T 2p10_A 240 PEDARFILDSCQGCHGFYGASSMERL------P-AEEAIRSQTLAFK 279 (286)
T ss_dssp HHHHHHHHHHCTTCCEEEESHHHHHH------H-HHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCccEEEeehhhhcC------C-HHHHHHHHHHHHH
Confidence 9999999998 99999999998874 2 3445555555544
No 118
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.45 E-value=1.6e-06 Score=76.48 Aligned_cols=80 Identities=18% Similarity=0.155 Sum_probs=62.5
Q ss_pred cCCHHHHHHHHHcCCcEEEEecc-cccCCCCCcchHHHHHHHHHHccCC-CeEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 021739 173 VLTAEDASLAIQYGAAGIIVSNH-GARQLDYVPATVMALEEVVQAAKGR-VPVFLDGGVRRGTDVFKALALGASGVFVGR 250 (308)
Q Consensus 173 ~~~~e~a~~~~~~G~d~i~v~~~-gg~~~~~~~~~~~~l~~i~~~~~~~-ipvia~GGI~~~~d~~k~l~~GAd~V~ig~ 250 (308)
..+++.++++.+.|+++|.--+. -|+. .+..+.+.+..+.+.. .+ +|||+.|||.+++|+.+++++|||+|++|+
T Consensus 132 ~~D~~~ak~l~~~G~~aVmPlg~pIGsG--~Gi~~~~~L~~i~~~~-~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgS 208 (268)
T 2htm_A 132 GPDLVLAKRLAALGTATVMPLAAPIGSG--WGVRTRALLELFAREK-ASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNT 208 (268)
T ss_dssp CSCHHHHHHHHHHTCSCBEEBSSSTTTC--CCSTTHHHHHHHHHTT-TTSSCBEEESCCCSHHHHHHHHHTTCCEEEESH
T ss_pred CCCHHHHHHHHhcCCCEEEecCccCcCC--cccCCHHHHHHHHHhc-CCCCeEEEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 47889999999999999964232 1221 1344566677776621 26 999999999999999999999999999999
Q ss_pred HHHHh
Q 021739 251 PVPFS 255 (308)
Q Consensus 251 ~~l~~ 255 (308)
.+..+
T Consensus 209 AI~~a 213 (268)
T 2htm_A 209 AIAEA 213 (268)
T ss_dssp HHHTS
T ss_pred HHhCC
Confidence 99863
No 119
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=98.45 E-value=9e-06 Score=70.54 Aligned_cols=97 Identities=24% Similarity=0.255 Sum_probs=68.3
Q ss_pred ccccCHHHHHHHHHhcCCCEEEEec-----CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccC
Q 021739 149 DRSLNWKDVKWLQTITSLPILVKGV-----LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKG 219 (308)
Q Consensus 149 d~~~~~~~i~~ir~~~~~Pv~vK~~-----~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~ 219 (308)
+.+...+.++++++..+-+ .+|.+ ++.++ ++.+.++|+|+|..+... ..+..+.+.+...++.+..
T Consensus 101 ~~~~v~~ei~~v~~a~~~~-~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTsTGf----~~~gat~~dv~~m~~~vg~ 175 (220)
T 1ub3_A 101 DLDYLEAEVRAVREAVPQA-VLKVILETGYFSPEEIARLAEAAIRGGADFLKTSTGF----GPRGASLEDVALLVRVAQG 175 (220)
T ss_dssp CHHHHHHHHHHHHHHSTTS-EEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSS----SSCCCCHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHcCC-CceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeCCCC----CCCCCCHHHHHHHHHhhCC
Confidence 3344567888888877544 56743 45554 567789999999976421 1123455555555555556
Q ss_pred CCeEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 021739 220 RVPVFLDGGVRRGTDVFKALALGASGVFVGR 250 (308)
Q Consensus 220 ~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~ 250 (308)
++||-++|||++.+|+.+++.+||+-++..+
T Consensus 176 ~v~VkaaGGirt~~~al~~i~aGa~RiG~S~ 206 (220)
T 1ub3_A 176 RAQVKAAGGIRDRETALRMLKAGASRLGTSS 206 (220)
T ss_dssp SSEEEEESSCCSHHHHHHHHHTTCSEEEETT
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCcccchhH
Confidence 8999999999999999999999999555443
No 120
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=98.44 E-value=7.4e-07 Score=87.77 Aligned_cols=77 Identities=16% Similarity=0.098 Sum_probs=64.1
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHH-cCCCEEEEchHHHH
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALA-LGASGVFVGRPVPF 254 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~-~GAd~V~ig~~~l~ 254 (308)
.+.++.+.++|++.|.+++....+...+ ++++.+.++++.+ ++|||++|||++.+|+.+++. .||++|++||+|+.
T Consensus 455 ~e~a~~~~~~Ga~~il~t~~~~dG~~~G-~d~~li~~l~~~~--~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a~~~ 531 (555)
T 1jvn_A 455 WELTRACEALGAGEILLNCIDKDGSNSG-YDLELIEHVKDAV--KIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHR 531 (555)
T ss_dssp HHHHHHHHHTTCCEEEECCGGGTTTCSC-CCHHHHHHHHHHC--SSCEEECSCCCSHHHHHHHHHHSCCSEEEESHHHHT
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCCCC-CCHHHHHHHHHhC--CccEEEECCCCCHHHHHHHHHhcCChHHHHHHHHHc
Confidence 5789999999999998865332222234 4789999998876 899999999999999999998 89999999999976
Q ss_pred h
Q 021739 255 S 255 (308)
Q Consensus 255 ~ 255 (308)
.
T Consensus 532 ~ 532 (555)
T 1jvn_A 532 G 532 (555)
T ss_dssp T
T ss_pred C
Confidence 4
No 121
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=98.44 E-value=4.1e-06 Score=72.97 Aligned_cols=141 Identities=22% Similarity=0.236 Sum_probs=90.2
Q ss_pred eeecCCchHHHHHHHHHHHcCCcEEEEec-CCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhh
Q 021739 69 LYVTKHRNVDAQLVKRAERAGFKAIALTV-DTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQ 147 (308)
Q Consensus 69 l~~~~d~~~~~~~~~~~~~~g~~~i~i~~-~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (308)
.....|+..+.+.++.+.+.|++.+.+.+ |.+.. |
T Consensus 16 ~i~a~d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~-------------~------------------------------- 51 (230)
T 1rpx_A 16 SILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFV-------------P------------------------------- 51 (230)
T ss_dssp BGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSS-------------S-------------------------------
T ss_pred EeecCCHHHHHHHHHHHHHCCCCEEEEeeccCCcc-------------c-------------------------------
Confidence 33456888888889999999999887764 22210 0
Q ss_pred cccccCHHHHHHHHHhcCCCEEEEecC-CH-HHHHHHHHcCCcEEEEecc--cc------------------------cC
Q 021739 148 IDRSLNWKDVKWLQTITSLPILVKGVL-TA-EDASLAIQYGAAGIIVSNH--GA------------------------RQ 199 (308)
Q Consensus 148 ~d~~~~~~~i~~ir~~~~~Pv~vK~~~-~~-e~a~~~~~~G~d~i~v~~~--gg------------------------~~ 199 (308)
+.....+.++++++.++.|+.+-... ++ +.++.+.++|+|+|.++.. .. +.
T Consensus 52 -~~~~~~~~i~~l~~~~~~~~~v~l~vnd~~~~v~~~~~~Gad~v~vh~~~~~~~~~~~~~~~~~~~g~~ig~~~~p~t~ 130 (230)
T 1rpx_A 52 -NITIGPLVVDSLRPITDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTP 130 (230)
T ss_dssp -CBCCCHHHHHHHGGGCCSCEEEEEESSSHHHHHHHHHHTTCSEEEEECSTTTCSCHHHHHHHHHHTTSEEEEEECTTCC
T ss_pred -ccccCHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEEEecCccchhHHHHHHHHHHcCCcEEEEeCCCCC
Confidence 01122466777777666666655443 33 3567777788888876554 21 00
Q ss_pred ------C----C-----------CC----cchHHHHHHHHHHcc---CCCeEEEecCCCCHHHHHHHHHcCCCEEEEchH
Q 021739 200 ------L----D-----------YV----PATVMALEEVVQAAK---GRVPVFLDGGVRRGTDVFKALALGASGVFVGRP 251 (308)
Q Consensus 200 ------~----~-----------~~----~~~~~~l~~i~~~~~---~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~ 251 (308)
. + .+ +...+.+.++++.+. .++|+++.|||+ ++++.+++++|||+|.+||+
T Consensus 131 ~e~~~~~~~~~d~vl~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~-~~n~~~~~~aGad~vvvgSa 209 (230)
T 1rpx_A 131 LTAIEYVLDAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVG-PKNAYKVIEAGANALVAGSA 209 (230)
T ss_dssp GGGGTTTTTTCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHH
T ss_pred HHHHHHHHhhCCEEEEEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCC-HHHHHHHHHcCCCEEEEChh
Confidence 0 0 01 112344455554331 268999999999 79999989999999999999
Q ss_pred HHHh
Q 021739 252 VPFS 255 (308)
Q Consensus 252 ~l~~ 255 (308)
++.+
T Consensus 210 I~~a 213 (230)
T 1rpx_A 210 VFGA 213 (230)
T ss_dssp HHTS
T ss_pred hhCC
Confidence 8863
No 122
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.42 E-value=9e-07 Score=78.11 Aligned_cols=77 Identities=14% Similarity=0.180 Sum_probs=61.0
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHh
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
.+.++.+.+.|++.|.++.........+ +.++.+.++++.+ ++|||++|||++++|+.+++++|||+|++|++++.+
T Consensus 154 ~e~~~~~~~~G~~~i~~~~~~~~g~~~g-~~~~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal~~~ 230 (253)
T 1thf_D 154 RDWVVEVEKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFR 230 (253)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTSCSC-CCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTT
T ss_pred HHHHHHHHHCCCCEEEEEeccCCCCCCC-CCHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCChHHHHHHHHHcC
Confidence 4668999999999998864321111122 3577888877654 799999999999999999999999999999999864
No 123
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=98.42 E-value=6.6e-07 Score=78.12 Aligned_cols=87 Identities=15% Similarity=0.079 Sum_probs=64.8
Q ss_pred HHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcc-hHHHHHHHHHHccCCCeEEEecCCCCHHHH
Q 021739 157 VKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPA-TVMALEEVVQAAKGRVPVFLDGGVRRGTDV 235 (308)
Q Consensus 157 i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~-~~~~l~~i~~~~~~~ipvia~GGI~~~~d~ 235 (308)
+.+.++..+.|++.. +.|++++..+.+.|+|+|.++.. ... ..+.|..++..+ .++|+++.|||. .+++
T Consensus 111 v~~~~~~~g~~~i~G-~~t~~e~~~A~~~Gad~vk~FPa-------~~~~G~~~lk~i~~~~-~~ipvvaiGGI~-~~N~ 180 (225)
T 1mxs_A 111 ILEAGVDSEIPLLPG-ISTPSEIMMGYALGYRRFKLFPA-------EISGGVAAIKAFGGPF-GDIRFCPTGGVN-PANV 180 (225)
T ss_dssp HHHHHHHCSSCEECE-ECSHHHHHHHHTTTCCEEEETTH-------HHHTHHHHHHHHHTTT-TTCEEEEBSSCC-TTTH
T ss_pred HHHHHHHhCCCEEEe-eCCHHHHHHHHHCCCCEEEEccC-------ccccCHHHHHHHHhhC-CCCeEEEECCCC-HHHH
Confidence 444445578888764 78999999999999999998431 000 245556555433 379999999995 7899
Q ss_pred HHHHH-cCCCEEEEchHHHH
Q 021739 236 FKALA-LGASGVFVGRPVPF 254 (308)
Q Consensus 236 ~k~l~-~GAd~V~ig~~~l~ 254 (308)
.+.+. .|+++|. ||.++.
T Consensus 181 ~~~l~~~Ga~~v~-gSai~~ 199 (225)
T 1mxs_A 181 RNYMALPNVMCVG-TTWMLD 199 (225)
T ss_dssp HHHHHSTTBCCEE-ECTTSC
T ss_pred HHHHhccCCEEEE-EchhcC
Confidence 99999 6999999 988764
No 124
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=98.41 E-value=6.5e-06 Score=70.97 Aligned_cols=47 Identities=17% Similarity=0.163 Sum_probs=37.2
Q ss_pred HHHHHHHHHcc---CCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHh
Q 021739 208 MALEEVVQAAK---GRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 208 ~~l~~i~~~~~---~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
+.+.++++... .++|++++|||+ ++++.+++.+|||+|.+||+++.+
T Consensus 155 ~~i~~~~~~~~~~~~~~~i~v~GGI~-~~~~~~~~~~Gad~vvvGsai~~~ 204 (220)
T 2fli_A 155 EKVATVAKWRDEKGLSFDIEVDGGVD-NKTIRACYEAGANVFVAGSYLFKA 204 (220)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHTS
T ss_pred HHHHHHHHHHHhcCCCceEEEECcCC-HHHHHHHHHcCCCEEEEChHHhCC
Confidence 44555544331 268999999999 899999889999999999999864
No 125
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=98.40 E-value=1.8e-06 Score=76.22 Aligned_cols=82 Identities=15% Similarity=0.121 Sum_probs=61.2
Q ss_pred cCCHHHHHHHHHcCCcEEEEecccccCCC--CCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 021739 173 VLTAEDASLAIQYGAAGIIVSNHGARQLD--YVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGR 250 (308)
Q Consensus 173 ~~~~e~a~~~~~~G~d~i~v~~~gg~~~~--~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~ 250 (308)
+-+.+++..+.+.|+|+|.++.-..+... ..+..++.+.++.+....++|+++.||| +.+++.+++.+||++|.+++
T Consensus 142 ~ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~aGa~gvav~s 220 (243)
T 3o63_A 142 THDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLDAGARRIVVVR 220 (243)
T ss_dssp ECSHHHHHHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHHTTCCCEEESH
T ss_pred CCCHHHHHHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHHcCCCEEEEeH
Confidence 46889999999999999998663222211 1133566677665432237999999999 89999999999999999999
Q ss_pred HHHHh
Q 021739 251 PVPFS 255 (308)
Q Consensus 251 ~~l~~ 255 (308)
.++.+
T Consensus 221 ai~~a 225 (243)
T 3o63_A 221 AITSA 225 (243)
T ss_dssp HHHTC
T ss_pred HHhCC
Confidence 98864
No 126
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=98.40 E-value=2.6e-06 Score=73.81 Aligned_cols=98 Identities=17% Similarity=0.199 Sum_probs=63.2
Q ss_pred HHHHHHHhcCCCEEEE--ecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHH
Q 021739 156 DVKWLQTITSLPILVK--GVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGT 233 (308)
Q Consensus 156 ~i~~ir~~~~~Pv~vK--~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~ 233 (308)
.++.+++. +++..+. ...|++++..+.+.|+|++.+....-.+..+.......+..+++....++|++++|||+ ++
T Consensus 101 ~~~~~~~~-g~~~~~d~l~~~T~~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~~l~~i~~~~~~~~pi~v~GGI~-~~ 178 (218)
T 3jr2_A 101 CKKVADEL-NGEIQIEIYGNWTMQDAKAWVDLGITQAIYHRSRDAELAGIGWTTDDLDKMRQLSALGIELSITGGIV-PE 178 (218)
T ss_dssp HHHHHHHH-TCEEEEECCSSCCHHHHHHHHHTTCCEEEEECCHHHHHHTCCSCHHHHHHHHHHHHTTCEEEEESSCC-GG
T ss_pred HHHHHHHh-CCccceeeeecCCHHHHHHHHHcCccceeeeeccccccCCCcCCHHHHHHHHHHhCCCCCEEEECCCC-HH
Confidence 34555543 5554432 23678889999999999987632100000011112334444444332479999999994 89
Q ss_pred HHHHHHHcCCCEEEEchHHHHh
Q 021739 234 DVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 234 d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
++.+++.+|||.+.+||+++.+
T Consensus 179 ~~~~~~~aGAd~vvvGsaI~~a 200 (218)
T 3jr2_A 179 DIYLFEGIKTKTFIAGRALAGA 200 (218)
T ss_dssp GGGGGTTSCEEEEEESGGGSHH
T ss_pred HHHHHHHcCCCEEEEchhhcCC
Confidence 9999999999999999998764
No 127
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=98.40 E-value=1.7e-06 Score=76.64 Aligned_cols=102 Identities=18% Similarity=0.199 Sum_probs=74.4
Q ss_pred CHHHHHHHHHhcCCCEEEEec-CCHHHHHHHHHcCCcEEEEecccc----------------c----------------C
Q 021739 153 NWKDVKWLQTITSLPILVKGV-LTAEDASLAIQYGAAGIIVSNHGA----------------R----------------Q 199 (308)
Q Consensus 153 ~~~~i~~ir~~~~~Pv~vK~~-~~~e~a~~~~~~G~d~i~v~~~gg----------------~----------------~ 199 (308)
+.+.++.+|+.+++||+.|.. .++.+...+..+|||+|.+...-- . .
T Consensus 89 s~~dL~~ir~~v~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lGl~~lvEv~~~eE~~~A~~ 168 (251)
T 1i4n_A 89 DPAFVRAARNLTCRPILAKDFYIDTVQVKLASSVGADAILIIARILTAEQIKEIYEAAEELGMDSLVEVHSREDLEKVFS 168 (251)
T ss_dssp CTHHHHHHHTTCCSCEEEECCCCSTHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHT
T ss_pred CHHHHHHHHHhCCCCEEEeeCCCCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHh
Confidence 468899999999999999975 344556668888888888754210 0 0
Q ss_pred C-C------------CCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHh
Q 021739 200 L-D------------YVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 200 ~-~------------~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
. . ....+++...++.+.++.++++|+.|||+|++|+.++..+ |++|.+|+.++..
T Consensus 169 l~g~~iIGinnr~l~t~~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVG~aimr~ 236 (251)
T 1i4n_A 169 VIRPKIIGINTRDLDTFEIKKNVLWELLPLVPDDTVVVAESGIKDPRELKDLRGK-VNAVLVGTSIMKA 236 (251)
T ss_dssp TCCCSEEEEECBCTTTCCBCTTHHHHHGGGSCTTSEEEEESCCCCGGGHHHHTTT-CSEEEECHHHHHC
T ss_pred cCCCCEEEEeCcccccCCCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEcHHHcCC
Confidence 1 0 0112233444554455556899999999999999999999 9999999999985
No 128
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=98.39 E-value=1.9e-06 Score=74.64 Aligned_cols=96 Identities=16% Similarity=0.140 Sum_probs=68.0
Q ss_pred HHHHHHhcCCCEEEEe-cCCHHHHHHHHHcCCcEEEEecc--cc-cCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCH
Q 021739 157 VKWLQTITSLPILVKG-VLTAEDASLAIQYGAAGIIVSNH--GA-RQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRG 232 (308)
Q Consensus 157 i~~ir~~~~~Pv~vK~-~~~~e~a~~~~~~G~d~i~v~~~--gg-~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~ 232 (308)
+..+++..+. ++++. +.+.+++..+.+.|+|+|.++.- ++ .+....+..++.+.++++.+. ++|+++.|||. +
T Consensus 107 ~~~~~~~~g~-~~~~~s~~t~~e~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~-~~pvia~GGI~-~ 183 (227)
T 2tps_A 107 AKEVRAAIGD-MILGVSAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGI-SIPIVGIGGIT-I 183 (227)
T ss_dssp HHHHHHHHTT-SEEEEEECSHHHHHHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTTC-CCCEEEESSCC-T
T ss_pred HHHHHHhcCC-cEEEEecCCHHHHHHHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhCC-CCCEEEEcCCC-H
Confidence 4555554444 44444 35777888899999999987431 11 111112345677777766552 39999999999 9
Q ss_pred HHHHHHHHcCCCEEEEchHHHHh
Q 021739 233 TDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 233 ~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
+++.+++.+||++|.+||.++..
T Consensus 184 ~nv~~~~~~Ga~gv~vgs~i~~~ 206 (227)
T 2tps_A 184 DNAAPVIQAGADGVSMISAISQA 206 (227)
T ss_dssp TTSHHHHHTTCSEEEESHHHHTS
T ss_pred HHHHHHHHcCCCEEEEhHHhhcC
Confidence 99999999999999999998753
No 129
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=98.31 E-value=6.1e-06 Score=72.15 Aligned_cols=138 Identities=18% Similarity=0.218 Sum_probs=91.2
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEec-CCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTV-DTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDR 150 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~-~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 150 (308)
..|...+.+.++++.+.|++.+-+.+ |.+.- | ..
T Consensus 13 a~D~~~l~~~i~~~~~~Gad~ihldi~DG~fv-------------p--------------------------------~~ 47 (230)
T 1tqj_A 13 SADFSRLGEEIKAVDEAGADWIHVDVMDGRFV-------------P--------------------------------NI 47 (230)
T ss_dssp GSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSS-------------S--------------------------------CB
T ss_pred ecCHhHHHHHHHHHHHcCCCEEEEEEEecCCC-------------c--------------------------------ch
Confidence 35778888899999999999876553 21110 0 11
Q ss_pred ccCHHHHHHHHHhcCCCEEEEec-CCH-HHHHHHHHcCCcEEEEecc--cc------------------------cC---
Q 021739 151 SLNWKDVKWLQTITSLPILVKGV-LTA-EDASLAIQYGAAGIIVSNH--GA------------------------RQ--- 199 (308)
Q Consensus 151 ~~~~~~i~~ir~~~~~Pv~vK~~-~~~-e~a~~~~~~G~d~i~v~~~--gg------------------------~~--- 199 (308)
.+..+.++++|+.++.|+.+-.. .++ ...+.+.++|+|+|+++.. .. +.
T Consensus 48 ~~g~~~v~~lr~~~~~~~~vhlmv~dp~~~i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~t~~e~ 127 (230)
T 1tqj_A 48 TIGPLIVDAIRPLTKKTLDVHLMIVEPEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTPLDF 127 (230)
T ss_dssp CBCHHHHHHHGGGCCSEEEEEEESSSGGGTHHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTTCCGGG
T ss_pred hhhHHHHHHHHhhcCCcEEEEEEccCHHHHHHHHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCCCcHHH
Confidence 22346788888877777774432 333 2467788888888877643 11 00
Q ss_pred -------CC---------------CCcchHHHHHHHHHHcc---CCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 021739 200 -------LD---------------YVPATVMALEEVVQAAK---GRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 200 -------~~---------------~~~~~~~~l~~i~~~~~---~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
.+ ..+...+.+.++++... .++||.++|||.. +++.++..+|||.+.+||+++.
T Consensus 128 ~~~~~~~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~aGad~vvvGSai~~ 206 (230)
T 1tqj_A 128 LEYVLPVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLEAGANAIVAGSAVFN 206 (230)
T ss_dssp GTTTGGGCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHHHTCCEEEESHHHHT
T ss_pred HHHHHhcCCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHHcCCCEEEECHHHHC
Confidence 00 01233555666655432 2699999999997 8999999999999999999875
Q ss_pred h
Q 021739 255 S 255 (308)
Q Consensus 255 ~ 255 (308)
+
T Consensus 207 a 207 (230)
T 1tqj_A 207 A 207 (230)
T ss_dssp S
T ss_pred C
Confidence 3
No 130
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=98.29 E-value=1.5e-06 Score=77.46 Aligned_cols=74 Identities=12% Similarity=0.167 Sum_probs=58.7
Q ss_pred HHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccC--CCeEEEecCCCCHHHHHHHHHc--CCCEEEEchHH
Q 021739 177 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKG--RVPVFLDGGVRRGTDVFKALAL--GASGVFVGRPV 252 (308)
Q Consensus 177 e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~--~ipvia~GGI~~~~d~~k~l~~--GAd~V~ig~~~ 252 (308)
+.++.+.++ ++.|.++.....+...++ .++.+.++.+.++. ++|||++|||++.+|+.+++.+ ||++|++||++
T Consensus 162 e~a~~~~~~-a~~il~t~i~~dG~~~G~-d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al 239 (260)
T 2agk_A 162 DTFRELRKY-TNEFLIHAADVEGLCGGI-DELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSL 239 (260)
T ss_dssp HHHHHHTTT-CSEEEEEC-------CCC-CHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTB
T ss_pred HHHHHHHHh-cCEEEEEeeccccCcCCC-CHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCH
Confidence 788999999 999998664332233344 78899988877522 6999999999999999999987 99999999997
No 131
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.29 E-value=2.1e-06 Score=75.65 Aligned_cols=76 Identities=14% Similarity=0.142 Sum_probs=60.6
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
.+.++.+.++|+|.|.+....+.. ......++.+.++++.+ ++||+++|||++++|+.++++.|||.|++|+.++.
T Consensus 38 ~~~a~~~~~~G~~~i~v~d~~~~~-~~~~~~~~~i~~i~~~~--~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~ 113 (247)
T 3tdn_A 38 RDWVVEVEKRGAGEILLTSIDRDG-TKSGYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVE 113 (247)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTT-CSSCCCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHTTCSEECCSHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEecCccc-CCCcccHHHHHHHHHhC--CCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHHhh
Confidence 467888999999999987532211 11234577778777665 79999999999999999999999999999998774
No 132
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=98.29 E-value=7.7e-06 Score=70.08 Aligned_cols=79 Identities=22% Similarity=0.235 Sum_probs=61.3
Q ss_pred CCHHHHHHHHHcCCcEEEEecc--cccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchH
Q 021739 174 LTAEDASLAIQYGAAGIIVSNH--GARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRP 251 (308)
Q Consensus 174 ~~~e~a~~~~~~G~d~i~v~~~--gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~ 251 (308)
.+++++..+.+.|+|+|.+++. ++......+..++.+.++++.. ++|+++.|||. ++++.+++.+||++|.+|+.
T Consensus 116 ~t~~e~~~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~--~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~ 192 (215)
T 1xi3_A 116 YSLEEALEAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESV--KIPVVAIGGIN-KDNAREVLKTGVDGIAVISA 192 (215)
T ss_dssp SSHHHHHHHHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHC--SSCEEEESSCC-TTTHHHHHTTTCSEEEESHH
T ss_pred CCHHHHHHHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhC--CCCEEEECCcC-HHHHHHHHHcCCCEEEEhHH
Confidence 5778888889999999998652 1111112345677788877665 79999999999 99999999999999999999
Q ss_pred HHHh
Q 021739 252 VPFS 255 (308)
Q Consensus 252 ~l~~ 255 (308)
++..
T Consensus 193 i~~~ 196 (215)
T 1xi3_A 193 VMGA 196 (215)
T ss_dssp HHTS
T ss_pred HhCC
Confidence 8763
No 133
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=98.27 E-value=4.9e-05 Score=66.97 Aligned_cols=137 Identities=18% Similarity=0.184 Sum_probs=94.3
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEec-CCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTV-DTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDR 150 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~-~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 150 (308)
..|...+.+.+++++++|++.+-+.+ |. .|. | +-
T Consensus 36 saD~~~L~~~i~~l~~~G~d~lHvDVmDg------------~FV-p--------------------------------ni 70 (246)
T 3inp_A 36 SADLARLGDDVKAVLAAGADNIHFDVMDN------------HYV-P--------------------------------NL 70 (246)
T ss_dssp GSCGGGHHHHHHHHHHTTCCCEEEEEEBS------------SSS-S--------------------------------CB
T ss_pred cCChhhHHHHHHHHHHcCCCEEEEEecCC------------CcC-c--------------------------------ch
Confidence 34777888899999999998765543 10 010 0 11
Q ss_pred ccCHHHHHHHHHhc-CCCEEEEec-CCH-HHHHHHHHcCCcEEEEecccc------------------------cC----
Q 021739 151 SLNWKDVKWLQTIT-SLPILVKGV-LTA-EDASLAIQYGAAGIIVSNHGA------------------------RQ---- 199 (308)
Q Consensus 151 ~~~~~~i~~ir~~~-~~Pv~vK~~-~~~-e~a~~~~~~G~d~i~v~~~gg------------------------~~---- 199 (308)
.+..+.++++|+.+ ++|+-+.+- .++ ..++.+.++|+|.|+++.... +.
T Consensus 71 t~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l 150 (246)
T 3inp_A 71 TFGPMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCL 150 (246)
T ss_dssp CCCHHHHHHHHHHTCCSCEEEEEECSSCHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGG
T ss_pred hcCHHHHHHHHHhCCCCeEEEEEeeCCHHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHH
Confidence 22347899999988 899998865 344 457888999999999965210 10
Q ss_pred ------CC-----------CC----cchHHHHHHHHHHc---cCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 021739 200 ------LD-----------YV----PATVMALEEVVQAA---KGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 200 ------~~-----------~~----~~~~~~l~~i~~~~---~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
.+ ++ +.+++-+.++++.. ..+++|.++|||+ .+.+.++.++|||.+.+||+++.
T Consensus 151 ~~~l~~vD~VlvMsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf~ 228 (246)
T 3inp_A 151 KYVESNIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIFN 228 (246)
T ss_dssp TTTGGGCSEEEEECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHHTTTCCEEEESHHHHT
T ss_pred HHHHhcCCEEEEeeecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHHHcCCCEEEEehHHhC
Confidence 00 11 33455566665443 2358999999999 68899999999999999998775
No 134
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=98.25 E-value=0.00014 Score=63.25 Aligned_cols=98 Identities=12% Similarity=0.115 Sum_probs=65.3
Q ss_pred HHHHHHHHhcCCCEEEEec-CC-HHHHHHHHHc--CCcEEEEecc-ccc-CCCCCcchHHHHHHHHHHccCCCeEEEecC
Q 021739 155 KDVKWLQTITSLPILVKGV-LT-AEDASLAIQY--GAAGIIVSNH-GAR-QLDYVPATVMALEEVVQAAKGRVPVFLDGG 228 (308)
Q Consensus 155 ~~i~~ir~~~~~Pv~vK~~-~~-~e~a~~~~~~--G~d~i~v~~~-gg~-~~~~~~~~~~~l~~i~~~~~~~ipvia~GG 228 (308)
+.++.+++. ++.+++-.. .+ .+..+...+. ++|+|.+... +|. .....+...+.+.++++.. .++|++++||
T Consensus 104 ~~~~~i~~~-g~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~-~~~pi~v~GG 181 (228)
T 1h1y_A 104 ELIQSIKAK-GMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKY-PSLDIEVDGG 181 (228)
T ss_dssp HHHHHHHHT-TCEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHC-TTSEEEEESS
T ss_pred HHHHHHHHc-CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhc-CCCCEEEECC
Confidence 456667654 566665442 22 3445555555 9999988532 221 1122334456667776654 3689999999
Q ss_pred CCCHHHHHHHHHcCCCEEEEchHHHHh
Q 021739 229 VRRGTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 229 I~~~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
|.. +++.+++..|||.+.+||.++.+
T Consensus 182 I~~-~ni~~~~~aGaD~vvvGsai~~~ 207 (228)
T 1h1y_A 182 LGP-STIDVAASAGANCIVAGSSIFGA 207 (228)
T ss_dssp CST-TTHHHHHHHTCCEEEESHHHHTS
T ss_pred cCH-HHHHHHHHcCCCEEEECHHHHCC
Confidence 996 89989999999999999998753
No 135
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.22 E-value=5.8e-05 Score=67.24 Aligned_cols=91 Identities=27% Similarity=0.460 Sum_probs=66.5
Q ss_pred HHHHHHHH---hcCCCEEEEecC---------CHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHcc
Q 021739 155 KDVKWLQT---ITSLPILVKGVL---------TAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAK 218 (308)
Q Consensus 155 ~~i~~ir~---~~~~Pv~vK~~~---------~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~ 218 (308)
+.++++++ .+++|+++=... +.+. ++.+.++|+|+|.++- . .+.+.+.++++.+
T Consensus 125 ~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~~-~--------~~~e~~~~~~~~~- 194 (263)
T 1w8s_A 125 EELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGADAMKIKY-T--------GDPKTFSWAVKVA- 194 (263)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEEC-C--------SSHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCCEEEEcC-C--------CCHHHHHHHHHhC-
Confidence 34444443 458898775434 5443 4677899999998862 1 1456677777665
Q ss_pred CCCeEEEecCCC--CHHHHHHHH----HcCCCEEEEchHHHHh
Q 021739 219 GRVPVFLDGGVR--RGTDVFKAL----ALGASGVFVGRPVPFS 255 (308)
Q Consensus 219 ~~ipvia~GGI~--~~~d~~k~l----~~GAd~V~ig~~~l~~ 255 (308)
+.+||+++|||+ +.+|+.+.+ +.||+++.+||.++.+
T Consensus 195 ~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~ 237 (263)
T 1w8s_A 195 GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQR 237 (263)
T ss_dssp TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTS
T ss_pred CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCC
Confidence 335999999999 889988777 7999999999998864
No 136
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=98.11 E-value=4.3e-05 Score=66.81 Aligned_cols=73 Identities=18% Similarity=0.171 Sum_probs=58.1
Q ss_pred CHHHHHHHHHcCC-----cEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 021739 175 TAEDASLAIQYGA-----AGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 249 (308)
Q Consensus 175 ~~e~a~~~~~~G~-----d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig 249 (308)
+++.++...++|. .+|.+.. .|. ....+.+.++++.. .++|++..|||++++++.+++. |||.|.+|
T Consensus 147 ~~e~~~~~a~~g~~~l~~~~Vyl~~-~G~-----~~~~~~i~~i~~~~-~~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVG 218 (234)
T 2f6u_A 147 DKELAASYALVGEKLFNLPIIYIEY-SGT-----YGNPELVAEVKKVL-DKARLFYGGGIDSREKAREMLR-YADTIIVG 218 (234)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEC-TTS-----CCCHHHHHHHHHHC-SSSEEEEESCCCSHHHHHHHHH-HSSEEEEC
T ss_pred CHHHHHHHHHhhhhhcCCCEEEEeC-CCC-----cchHHHHHHHHHhC-CCCCEEEEecCCCHHHHHHHHh-CCCEEEEC
Confidence 5677887777776 7777765 332 34577788887764 2689999999999999999998 99999999
Q ss_pred hHHHHh
Q 021739 250 RPVPFS 255 (308)
Q Consensus 250 ~~~l~~ 255 (308)
++++..
T Consensus 219 Sa~v~~ 224 (234)
T 2f6u_A 219 NVIYEK 224 (234)
T ss_dssp HHHHHH
T ss_pred hHHHhC
Confidence 999864
No 137
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=98.07 E-value=0.00016 Score=62.87 Aligned_cols=101 Identities=19% Similarity=0.120 Sum_probs=67.3
Q ss_pred ccccCHHHHHHHHHhcCCCEEEEec-----CCHHH----HHHHHHcCCcEEEEeccccc------CCCCCcchHHH---H
Q 021739 149 DRSLNWKDVKWLQTITSLPILVKGV-----LTAED----ASLAIQYGAAGIIVSNHGAR------QLDYVPATVMA---L 210 (308)
Q Consensus 149 d~~~~~~~i~~ir~~~~~Pv~vK~~-----~~~e~----a~~~~~~G~d~i~v~~~gg~------~~~~~~~~~~~---l 210 (308)
+.+...+.|+++++..+- ..+|.+ ++.++ ++.+.++|+|+|..|..... ....+..+.+. +
T Consensus 96 ~~~~v~~ei~~v~~a~~~-~~lKvIlEt~~Lt~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm 174 (226)
T 1vcv_A 96 RWAEVRRDLISVVGAAGG-RVVKVITEEPYLRDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAI 174 (226)
T ss_dssp CHHHHHHHHHHHHHHTTT-SEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcC-CCceEEEeccCCCHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHH
Confidence 444456788888887642 256643 45544 56778999999997642210 01123334444 4
Q ss_pred HHHHHHccCCCeEEEecCCCCHHHHHHHHHc---CCC----EEEEch
Q 021739 211 EEVVQAAKGRVPVFLDGGVRRGTDVFKALAL---GAS----GVFVGR 250 (308)
Q Consensus 211 ~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~---GAd----~V~ig~ 250 (308)
.+..+..+.+++|-++|||++.+|+.+++.+ ||+ -++..+
T Consensus 175 ~~~i~~~g~~v~vKaaGGirt~~~al~~i~a~~~Ga~~~~fRiGtS~ 221 (226)
T 1vcv_A 175 ARYIKEKGYRLGVKMAGGIRTREQAKAIVDAIGWGEDPARVRLGTST 221 (226)
T ss_dssp HHHHHHHTCCCEEEEESSCCSHHHHHHHHHHHCSCSCTTTEEEEESC
T ss_pred HHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHCCCCcCCceEecCc
Confidence 4443336668999999999999999999999 999 766554
No 138
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=98.07 E-value=4.3e-05 Score=67.30 Aligned_cols=102 Identities=18% Similarity=0.207 Sum_probs=76.9
Q ss_pred cCHHHHHHHHHhcCCCEEEEec-CCHHHHHHHHHcCCcEEEEeccc--------------ccC-----------------
Q 021739 152 LNWKDVKWLQTITSLPILVKGV-LTAEDASLAIQYGAAGIIVSNHG--------------ARQ----------------- 199 (308)
Q Consensus 152 ~~~~~i~~ir~~~~~Pv~vK~~-~~~e~a~~~~~~G~d~i~v~~~g--------------g~~----------------- 199 (308)
...+.++++.+.+.+|+.+.+. .+.++++.+.++|+|.|.+.... |.+
T Consensus 62 ~~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~ 141 (243)
T 4gj1_A 62 RQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVA 141 (243)
T ss_dssp CCHHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTTTCHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC
T ss_pred hHHHHHHHHHHhcCCCeEeccccccHHHHHHHHHcCCCEEEEccccccCCchHHHHHhcccCceEEEEEEEEeCCCCEEE
Confidence 3467899999999999999875 68899999999999999885310 000
Q ss_pred -------------------------------C--CC--CcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCC
Q 021739 200 -------------------------------L--DY--VPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGAS 244 (308)
Q Consensus 200 -------------------------------~--~~--~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd 244 (308)
. ++ .-+..+.+.++.+.. .++|||++||+++.+|+.+ +..+++
T Consensus 142 ~~gw~~~~~~~~~~~~~~~~~~g~~eil~t~Id~DGt~~G~d~~l~~~l~~~~-~~ipviasGGv~~~~Dl~~-l~~~~~ 219 (243)
T 4gj1_A 142 VNAWQEASDKKLMEVLDFYSNKGLKHILCTDISKDGTMQGVNVRLYKLIHEIF-PNICIQASGGVASLKDLEN-LKGICS 219 (243)
T ss_dssp --------CCBHHHHHHHHHTTTCCEEEEEETTC-----CCCHHHHHHHHHHC-TTSEEEEESCCCSHHHHHH-TTTTCS
T ss_pred ecCceecccchHHHHHHHHhhcCCcEEEeeeecccccccCCCHHHHHHHHHhc-CCCCEEEEcCCCCHHHHHH-HHccCc
Confidence 0 00 123566677776554 3699999999999999976 466799
Q ss_pred EEEEchHHHHh
Q 021739 245 GVFVGRPVPFS 255 (308)
Q Consensus 245 ~V~ig~~~l~~ 255 (308)
+|.+|++|..+
T Consensus 220 gvivg~Al~~g 230 (243)
T 4gj1_A 220 GVIVGKALLDG 230 (243)
T ss_dssp EEEECHHHHTT
T ss_pred hhehHHHHHCC
Confidence 99999998764
No 139
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=98.00 E-value=7.2e-05 Score=65.37 Aligned_cols=89 Identities=17% Similarity=0.178 Sum_probs=60.9
Q ss_pred HHHHHHHHHhc---CCCEEEEec-----CCHHH----HHHHHHcCCcEEEEecccccCCCC-CcchHHHHHH--HHHHcc
Q 021739 154 WKDVKWLQTIT---SLPILVKGV-----LTAED----ASLAIQYGAAGIIVSNHGARQLDY-VPATVMALEE--VVQAAK 218 (308)
Q Consensus 154 ~~~i~~ir~~~---~~Pv~vK~~-----~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~-~~~~~~~l~~--i~~~~~ 218 (308)
.++++++++.. +.|+ |.+ ++.++ ++.+.++|+|+|..+... .. +..+.+.+.. .++.+.
T Consensus 119 ~~ei~~v~~a~~~~g~~l--KvIlEt~~L~~e~i~~a~ria~eaGADfVKTsTG~----~~~~gAt~~dv~l~~m~~~v~ 192 (234)
T 1n7k_A 119 YREVSGIVKLAKSYGAVV--KVILEAPLWDDKTLSLLVDSSRRAGADIVKTSTGV----YTKGGDPVTVFRLASLAKPLG 192 (234)
T ss_dssp HHHHHHHHHHHHHTTCEE--EEECCGGGSCHHHHHHHHHHHHHTTCSEEESCCSS----SCCCCSHHHHHHHHHHHGGGT
T ss_pred HHHHHHHHHHHhhcCCeE--EEEEeccCCCHHHHHHHHHHHHHhCCCEEEeCCCC----CCCCCCCHHHHHHHHHHHHHC
Confidence 45677777654 3554 654 45443 567789999999875321 11 2345555444 555553
Q ss_pred CCCeEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 021739 219 GRVPVFLDGGVRRGTDVFKALALGASGVFVGR 250 (308)
Q Consensus 219 ~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~ 250 (308)
+||-++|||++.+|+.+++++||+-++..+
T Consensus 193 --v~VKaaGGirt~~~al~~i~aGa~RiG~S~ 222 (234)
T 1n7k_A 193 --MGVKASGGIRSGIDAVLAVGAGADIIGTSS 222 (234)
T ss_dssp --CEEEEESSCCSHHHHHHHHHTTCSEEEETT
T ss_pred --CCEEEecCCCCHHHHHHHHHcCccccchHH
Confidence 999999999999999999999999655443
No 140
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=97.98 E-value=0.00028 Score=59.61 Aligned_cols=140 Identities=15% Similarity=0.127 Sum_probs=94.6
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
+.|...+.+.++++++.|- .+.+++|-.. ++ .. ...+-+++.....|+
T Consensus 37 ~g~i~~l~~~v~~lk~~~K-~v~Vh~Dli~----------Gl------s~---------------d~~ai~fL~~~~~pd 84 (192)
T 3kts_A 37 ETHVAQLKALVKYAQAGGK-KVLLHADLVN----------GL------KN---------------DDYAIDFLCTEICPD 84 (192)
T ss_dssp SEETTTHHHHHHHHHHTTC-EEEEEGGGEE----------TC------CC---------------SHHHHHHHHHTTCCS
T ss_pred cCcHHHHHHHHHHHHHcCC-eEEEecCchh----------cc------CC---------------cHHHHHHHHhCCCCC
Confidence 4577888899999999985 5556876321 11 00 011123443333444
Q ss_pred c----CHHHHHHHHHhcCCCEEEEecC-C---H-HHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCe
Q 021739 152 L----NWKDVKWLQTITSLPILVKGVL-T---A-EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVP 222 (308)
Q Consensus 152 ~----~~~~i~~ir~~~~~Pv~vK~~~-~---~-e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 222 (308)
. ....++..++ .++..+-+..+ + . ...+.+.+...|++.+-. +. ....+.++++.+ ++|
T Consensus 85 GIIsTk~~~i~~Ak~-~gL~tIqR~FliDS~al~~~~~~i~~~~PD~iEiLP--------Gi-~p~iI~~i~~~~--~~P 152 (192)
T 3kts_A 85 GIISTRGNAIMKAKQ-HKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLP--------GI-IPEQVQKMTQKL--HIP 152 (192)
T ss_dssp EEEESCHHHHHHHHH-TTCEEEEEEECCSHHHHHHHHHHHHHHCCSEEEEEC--------TT-CHHHHHHHHHHH--CCC
T ss_pred EEEeCcHHHHHHHHH-CCCeEEEEEEEEEcchHHHHHHHHhhcCCCEEEECC--------ch-hHHHHHHHHHhc--CCC
Confidence 3 2455666665 46666656442 2 2 235667778899997642 22 236778887776 899
Q ss_pred EEEecCCCCHHHHHHHHHcCCCEEEEchHHHHh
Q 021739 223 VFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 223 via~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
||+.|+|++.+|+.+++.+||++|..++..+|.
T Consensus 153 iIaGGlI~~~edv~~al~aGA~aVsTs~~~LW~ 185 (192)
T 3kts_A 153 VIAGGLIETSEQVNQVIASGAIAVTTSNKHLWE 185 (192)
T ss_dssp EEEESSCCSHHHHHHHHTTTEEEEEECCGGGGT
T ss_pred EEEECCcCCHHHHHHHHHcCCeEEEeCCHHHhC
Confidence 999999999999999999999999999999985
No 141
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=97.96 E-value=0.00011 Score=65.75 Aligned_cols=88 Identities=13% Similarity=0.125 Sum_probs=60.3
Q ss_pred cCHHHHHHHHHhcCCCEEEEecC------CHH----HHHHHHHcCCcEEEEecccccCCCCCcchHHH---HHHHHHHc-
Q 021739 152 LNWKDVKWLQTITSLPILVKGVL------TAE----DASLAIQYGAAGIIVSNHGARQLDYVPATVMA---LEEVVQAA- 217 (308)
Q Consensus 152 ~~~~~i~~ir~~~~~Pv~vK~~~------~~e----~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~---l~~i~~~~- 217 (308)
...++|+++++.++ +..+|.++ +.+ -++.+.++|+|+|..+.... .+..+.+. +.++.+..
T Consensus 142 ~v~~eI~~v~~a~~-~~~lKVIlEt~~L~d~e~i~~A~~ia~eaGADfVKTSTGf~----~~gAT~edv~lm~~~v~~~~ 216 (281)
T 2a4a_A 142 EATKLTQSVKKLLT-NKILKVIIEVGELKTEDLIIKTTLAVLNGNADFIKTSTGKV----QINATPSSVEYIIKAIKEYI 216 (281)
T ss_dssp HHHHHHHHHHTTCT-TSEEEEECCHHHHCSHHHHHHHHHHHHTTTCSEEECCCSCS----SCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHHHHHHHHHhCCCEEEeCCCCC----CCCCCHHHHHHHHHHHHHhh
Confidence 45678899988774 35678663 233 24677899999999764211 12234443 34333211
Q ss_pred ------cCCCeEEEecCCCCHHHHHHHHHcCCC
Q 021739 218 ------KGRVPVFLDGGVRRGTDVFKALALGAS 244 (308)
Q Consensus 218 ------~~~ipvia~GGI~~~~d~~k~l~~GAd 244 (308)
..+++|-++|||+|.+|+.+++.+||+
T Consensus 217 ~~~~~tg~~vgVKaaGGIrt~e~al~~i~aga~ 249 (281)
T 2a4a_A 217 KNNPEKNNKIGLKVSGGISDLNTASHYILLARR 249 (281)
T ss_dssp HHCGGGTTCCEEEEESSCCSHHHHHHHHHHHHH
T ss_pred cccccCCCCceEEEeCCCCCHHHHHHHHHHhhh
Confidence 568999999999999999999999886
No 142
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=97.94 E-value=4.4e-05 Score=67.15 Aligned_cols=76 Identities=14% Similarity=0.178 Sum_probs=57.7
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
.+.++.+.++|+|.|.++...+.. ......+..+.++++.+ ++|+++.|||++++++.++++.|||.|.+|+..+.
T Consensus 33 ~~~a~~~~~~Gad~i~v~d~~~~~-~~~~~~~~~i~~i~~~~--~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~ 108 (253)
T 1thf_D 33 VELGKFYSEIGIDELVFLDITASV-EKRKTMLELVEKVAEQI--DIPFTVGGGIHDFETASELILRGADKVSINTAAVE 108 (253)
T ss_dssp HHHHHHHHHTTCCEEEEEESSCSS-SHHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred HHHHHHHHHcCCCEEEEECCchhh-cCCcccHHHHHHHHHhC--CCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 356788899999999987533211 01122345556665543 79999999999999999999999999999998875
No 143
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.94 E-value=4.1e-05 Score=67.30 Aligned_cols=76 Identities=24% Similarity=0.236 Sum_probs=57.8
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
.+.++.+.++|+|.|.++...... ......+..+.++++.+ ++||++.|||++.+++.+++++|||.|.+|+.++.
T Consensus 34 ~~~a~~~~~~Gad~i~v~d~~~~~-~~~~~~~~~i~~i~~~~--~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~ 109 (252)
T 1ka9_F 34 VEAARAYDEAGADELVFLDISATH-EERAILLDVVARVAERV--FIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAVR 109 (252)
T ss_dssp HHHHHHHHHHTCSCEEEEECCSST-TCHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEcCCccc-cCccccHHHHHHHHHhC--CCCEEEECCcCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 356788899999999887432110 11123345566666544 79999999999999999999999999999998875
No 144
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=97.92 E-value=0.00053 Score=61.94 Aligned_cols=88 Identities=25% Similarity=0.335 Sum_probs=59.8
Q ss_pred HHHHHHHH---hcCCCEEEEec------CCHH----HHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCC
Q 021739 155 KDVKWLQT---ITSLPILVKGV------LTAE----DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRV 221 (308)
Q Consensus 155 ~~i~~ir~---~~~~Pv~vK~~------~~~e----~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~i 221 (308)
+.++++++ .+++|+++=.. .+++ .++.+.++|+|+|.++-. + +.+.++.+.. ++
T Consensus 158 ~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~~t-~----------e~~~~vv~~~--~v 224 (295)
T 3glc_A 158 KNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYYV-E----------KGFERIVAGC--PV 224 (295)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEECC-T----------TTHHHHHHTC--SS
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeCCC-H----------HHHHHHHHhC--CC
Confidence 44444444 35789887221 2333 467888999999987621 1 1245555544 79
Q ss_pred eEEEecCCCC-HH----HHHHHHHcCCCEEEEchHHHHh
Q 021739 222 PVFLDGGVRR-GT----DVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 222 pvia~GGI~~-~~----d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
||++.||+.. .+ .+.+++.+||+++.+||.++..
T Consensus 225 PVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~ 263 (295)
T 3glc_A 225 PIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQS 263 (295)
T ss_dssp CEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTS
T ss_pred cEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcC
Confidence 9999999985 33 3556668999999999998864
No 145
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=97.91 E-value=0.00014 Score=61.97 Aligned_cols=76 Identities=18% Similarity=0.117 Sum_probs=51.3
Q ss_pred CHHH-HHHHHHcCCcEEEEec-ccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHH
Q 021739 175 TAED-ASLAIQYGAAGIIVSN-HGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPV 252 (308)
Q Consensus 175 ~~e~-a~~~~~~G~d~i~v~~-~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~ 252 (308)
++++ ++.+.+.|+|++.+.. .........+.. ..++++.+. ++|+++.|||+ ++++.++++.|||.+.+||++
T Consensus 115 ~p~~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~-~~i~~~~~~---~~pi~v~GGI~-~~~~~~~~~aGad~vvvGsaI 189 (207)
T 3ajx_A 115 DKATRAQEVRALGAKFVEMHAGLDEQAKPGFDLN-GLLAAGEKA---RVPFSVAGGVK-VATIPAVQKAGAEVAVAGGAI 189 (207)
T ss_dssp SHHHHHHHHHHTTCSEEEEECCHHHHTSTTCCTH-HHHHHHHHH---TSCEEEESSCC-GGGHHHHHHTTCSEEEESHHH
T ss_pred ChHHHHHHHHHhCCCEEEEEecccccccCCCchH-HHHHHhhCC---CCCEEEECCcC-HHHHHHHHHcCCCEEEEeeec
Confidence 5555 6777788999995432 111000001122 444444322 68999999998 788999999999999999998
Q ss_pred HHh
Q 021739 253 PFS 255 (308)
Q Consensus 253 l~~ 255 (308)
+.+
T Consensus 190 ~~~ 192 (207)
T 3ajx_A 190 YGA 192 (207)
T ss_dssp HTS
T ss_pred cCC
Confidence 864
No 146
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=97.90 E-value=0.00036 Score=60.90 Aligned_cols=100 Identities=17% Similarity=0.105 Sum_probs=67.5
Q ss_pred HHHHHHHHHhcCCCEEEEec-CCHH-HHHHHHHcCCcEEEEeccc-c------------------------cC-------
Q 021739 154 WKDVKWLQTITSLPILVKGV-LTAE-DASLAIQYGAAGIIVSNHG-A------------------------RQ------- 199 (308)
Q Consensus 154 ~~~i~~ir~~~~~Pv~vK~~-~~~e-~a~~~~~~G~d~i~v~~~g-g------------------------~~------- 199 (308)
...++++|+.++.|+-+-.- .+++ .++.+.++|+|+|+++... . +.
T Consensus 46 ~~~v~~lr~~~~~~~dvhLmv~dp~~~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~ 125 (231)
T 3ctl_A 46 PFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPVEAMKYY 125 (231)
T ss_dssp HHHHHHHHTTCCSCEEEEEESSCGGGTHHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTT
T ss_pred HHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEECcccCCccHHHHHHHHHHcCCeEEEEEECCCcHHHHHHH
Confidence 46788888877777766643 3443 3677888888888875422 1 00
Q ss_pred ---CC-----------C----CcchHHHHHHHHHHcc---CCCeEEEecCCCCHHHHHHHHHcCCCEEEEc-hHHHH
Q 021739 200 ---LD-----------Y----VPATVMALEEVVQAAK---GRVPVFLDGGVRRGTDVFKALALGASGVFVG-RPVPF 254 (308)
Q Consensus 200 ---~~-----------~----~~~~~~~l~~i~~~~~---~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig-~~~l~ 254 (308)
.+ + .+...+-+.++++... .+++|.++|||. .+.+.++.++|||.+.+| |.++.
T Consensus 126 l~~~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~-~~~~~~~~~aGAd~~V~G~saif~ 201 (231)
T 3ctl_A 126 IHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCN-QATYEKLMAAGADVFIVGTSGLFN 201 (231)
T ss_dssp GGGCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCS-TTTHHHHHHHTCCEEEECTTTTGG
T ss_pred HhcCCEEEEeeeccCcCCccccHHHHHHHHHHHHHHhccCCCceEEEECCcC-HHHHHHHHHcCCCEEEEccHHHhC
Confidence 00 1 1234455555554432 268999999998 688889999999999999 88765
No 147
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=97.90 E-value=0.00014 Score=64.48 Aligned_cols=93 Identities=23% Similarity=0.232 Sum_probs=63.0
Q ss_pred cccccCHHHHHHHHHhcC-CCEEEEecC------CHH----HHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHH
Q 021739 148 IDRSLNWKDVKWLQTITS-LPILVKGVL------TAE----DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQA 216 (308)
Q Consensus 148 ~d~~~~~~~i~~ir~~~~-~Pv~vK~~~------~~e----~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~ 216 (308)
++.+...+.|+++++.++ .+..+|.++ +.+ -++.+.++|+|+|..|.... .+..+.+.+.-.++.
T Consensus 114 g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~~ia~eaGADfVKTSTGf~----~~gAt~e~v~lm~~~ 189 (260)
T 1p1x_A 114 GNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTSTGKV----AVNATPESARIMMEV 189 (260)
T ss_dssp TCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHHHHHHTTCSEEECCCSCS----SCCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHHHHHHHhCCCEEEeCCCCC----CCCCCHHHHHHHHHH
Confidence 344555678888888763 245677663 233 24677899999999764211 122345543333333
Q ss_pred -----ccCCCeEEEecCCCCHHHHHHHHHcCCC
Q 021739 217 -----AKGRVPVFLDGGVRRGTDVFKALALGAS 244 (308)
Q Consensus 217 -----~~~~ipvia~GGI~~~~d~~k~l~~GAd 244 (308)
+..+++|-++|||++.+|+.+++.+||+
T Consensus 190 I~~~~~g~~v~VKaaGGIrt~~~al~~i~aga~ 222 (260)
T 1p1x_A 190 IRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADE 222 (260)
T ss_dssp HHHHTCTTTCEEECBSSCCSHHHHHHHHHHHHH
T ss_pred HHHhcCCCCceEEEeCCCCCHHHHHHHHHhhhh
Confidence 3468999999999999999999999886
No 148
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=97.88 E-value=5.9e-05 Score=67.24 Aligned_cols=69 Identities=17% Similarity=0.180 Sum_probs=55.9
Q ss_pred HHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 021739 180 SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 180 ~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
....+.|.+.|.+...+ .+...+.+.++++.+...+||++.|||+|.+|+.+++.+|||.|.+|+.++.
T Consensus 193 ~~gad~G~~lV~LD~~~------~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~ 261 (286)
T 3vk5_A 193 HVARAFGFHMVYLYSRN------EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQ 261 (286)
T ss_dssp HHHHHTTCSEEEEECSS------SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSS
T ss_pred HHHHHcCCCEEEEcCCC------CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhc
Confidence 44567788888887532 2345678888887763369999999999999999999999999999999875
No 149
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=97.86 E-value=0.00012 Score=63.88 Aligned_cols=75 Identities=29% Similarity=0.217 Sum_probs=59.3
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
.+.++.+.++|+|.|.+..-.+.. ...... ..+.++++.+ ++|+++.|||++++++.+++++|||.|.+|+..+.
T Consensus 34 ~~~a~~~~~~Gad~i~v~~~d~~~-~~~~~~-~~i~~i~~~~--~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~l~ 108 (244)
T 2y88_A 34 VDAALGWQRDGAEWIHLVDLDAAF-GRGSNH-ELLAEVVGKL--DVQVELSGGIRDDESLAAALATGCARVNVGTAALE 108 (244)
T ss_dssp HHHHHHHHHTTCSEEEEEEHHHHT-TSCCCH-HHHHHHHHHC--SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEcCcccc-cCCChH-HHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHcCCCEEEECchHhh
Confidence 466888999999999997532211 112334 6777877765 79999999999999999999999999999998765
No 150
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=97.85 E-value=4.2e-05 Score=67.26 Aligned_cols=108 Identities=24% Similarity=0.337 Sum_probs=79.8
Q ss_pred CCceEEeeec-------CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCC
Q 021739 63 GIRFFQLYVT-------KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKT 135 (308)
Q Consensus 63 ~~~~~Ql~~~-------~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~ 135 (308)
+..|++|+.- .|+..+.+..+++.+.|++.+-+..+.|+.++|..++...+.+|.. .-
T Consensus 102 ~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg---------------~p 166 (265)
T 1wv2_A 102 GHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLA---------------GL 166 (265)
T ss_dssp SCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHSCCSEEEECS---------------SS
T ss_pred CCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEeCC---------------cc
Confidence 4679999976 5667777888888888999987788888888887776544433310 00
Q ss_pred CCchhhhHhhhhcccccCHHHHHHHHHhcCCCEEEEe-cCCHHHHHHHHHcCCcEEEEec
Q 021739 136 DDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKG-VLTAEDASLAIQYGAAGIIVSN 194 (308)
Q Consensus 136 ~~~~~~~~~~~~~d~~~~~~~i~~ir~~~~~Pv~vK~-~~~~e~a~~~~~~G~d~i~v~~ 194 (308)
+|++ ..-.+++.|+.+++..++||++.. +.+++++..+.+.|+|+|.+..
T Consensus 167 IGsG---------~Gi~~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgS 217 (265)
T 1wv2_A 167 IGSG---------LGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVLMNT 217 (265)
T ss_dssp TTCC---------CCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHHTCSEEEESH
T ss_pred CCCC---------CCcCCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 0111 111247889999998899999984 5789999999999999998743
No 151
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=97.85 E-value=0.00012 Score=66.20 Aligned_cols=86 Identities=20% Similarity=0.227 Sum_probs=68.6
Q ss_pred HHHHHHHHhcCC-CEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHH
Q 021739 155 KDVKWLQTITSL-PILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGT 233 (308)
Q Consensus 155 ~~i~~ir~~~~~-Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~ 233 (308)
+.++.+|+..+. +|.+ .+-+.++++.+.++|+|+|.+++. +.+.+.++++.+..+++|.++||| +.+
T Consensus 197 ~ai~~~r~~~~~~kI~v-ev~tlee~~eA~~aGaD~I~ld~~----------~~e~l~~~v~~~~~~~~I~ASGGI-t~~ 264 (296)
T 1qap_A 197 QAVEKAFWLHPDVPVEV-EVENLDELDDALKAGADIIMLDNF----------NTDQMREAVKRVNGQARLEVSGNV-TAE 264 (296)
T ss_dssp HHHHHHHHHSTTSCEEE-EESSHHHHHHHHHTTCSEEEESSC----------CHHHHHHHHHTTCTTCCEEECCCS-CHH
T ss_pred HHHHHHHHhCCCCcEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEECCC-CHH
Confidence 567888877643 5555 456778999999999999998752 356666666666567999999999 899
Q ss_pred HHHHHHHcCCCEEEEchHH
Q 021739 234 DVFKALALGASGVFVGRPV 252 (308)
Q Consensus 234 d~~k~l~~GAd~V~ig~~~ 252 (308)
++.+..+.|+|.+.+|+..
T Consensus 265 ~i~~~a~~GvD~isvGsli 283 (296)
T 1qap_A 265 TLREFAETGVDFISVGALT 283 (296)
T ss_dssp HHHHHHHTTCSEEECSHHH
T ss_pred HHHHHHHcCCCEEEEeHHH
Confidence 9999999999999999854
No 152
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=97.85 E-value=5e-05 Score=68.03 Aligned_cols=88 Identities=16% Similarity=0.117 Sum_probs=67.5
Q ss_pred HHHHHHHHHhcC--CCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHcc---CCCeEEEecC
Q 021739 154 WKDVKWLQTITS--LPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAK---GRVPVFLDGG 228 (308)
Q Consensus 154 ~~~i~~ir~~~~--~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~---~~ipvia~GG 228 (308)
.+.++.+|+..+ .++.+ .+-+.++++.+.++|+|+|.+++.+ .+.+.++++.+. +++|+.++||
T Consensus 169 ~~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~~----------~~~l~~~v~~l~~~~~~~~i~AsGG 237 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEI-ECESFEEAKNAMNAGADIVMCDNLS----------VLETKEIAAYRDAHYPFVLLEASGN 237 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEE-EESSHHHHHHHHHHTCSEEEEETCC----------HHHHHHHHHHHHHHCTTCEEEEESS
T ss_pred HHHHHHHHHhCCCCceEEE-EcCCHHHHHHHHHcCCCEEEECCCC----------HHHHHHHHHHhhccCCCcEEEEECC
Confidence 456888888764 45665 5567899999999999999987621 344444443332 3599999999
Q ss_pred CCCHHHHHHHHHcCCCEEEEchHHH
Q 021739 229 VRRGTDVFKALALGASGVFVGRPVP 253 (308)
Q Consensus 229 I~~~~d~~k~l~~GAd~V~ig~~~l 253 (308)
| +.+++.+.+++|||.+.+|+.+.
T Consensus 238 I-~~~ni~~~~~aGaD~i~vGs~i~ 261 (273)
T 2b7n_A 238 I-SLESINAYAKSGVDAISVGALIH 261 (273)
T ss_dssp C-CTTTHHHHHTTTCSEEECTHHHH
T ss_pred C-CHHHHHHHHHcCCcEEEEcHHhc
Confidence 9 89999999999999999999854
No 153
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=97.83 E-value=0.00026 Score=61.30 Aligned_cols=96 Identities=16% Similarity=0.111 Sum_probs=62.7
Q ss_pred CCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHH
Q 021739 174 LTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVP 253 (308)
Q Consensus 174 ~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l 253 (308)
.+.+.++.+.+.|++.+.+.-....+.++...+...+..+++....+++|.++|||+ ++++.++..+|||.+.+||++.
T Consensus 122 ~~~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~e~~~ir~~~~~~~~i~v~gGI~-~~~~~~~~~aGad~~VvG~~I~ 200 (221)
T 3exr_A 122 WTYDQAQQWLDAGISQAIYHQSRDALLAGETWGEKDLNKVKKLIEMGFRVSVTGGLS-VDTLKLFEGVDVFTFIAGRGIT 200 (221)
T ss_dssp CCHHHHHHHHHTTCCEEEEECCHHHHHHTCCCCHHHHHHHHHHHHHTCEEEEESSCC-GGGGGGGTTCCCSEEEECHHHH
T ss_pred CCHHHHHHHHcCCHHHHHHHHHHhcCCCccccCHHHHHHHHHhhcCCceEEEECCCC-HHHHHHHHHCCCCEEEECchhh
Confidence 356777788888999887743211111222223445556655544468899999995 7788888889999999999977
Q ss_pred HhcccCCHHHHHHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQMLRDEFE 276 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~~~l~ 276 (308)
.+ ..+. +.++.++++++
T Consensus 201 ~a---~dp~---~a~~~~~~~~~ 217 (221)
T 3exr_A 201 EA---KNPA---GAARAFKDEIK 217 (221)
T ss_dssp TS---SSHH---HHHHHHHHHHH
T ss_pred CC---CCHH---HHHHHHHHHHH
Confidence 53 2232 34455555554
No 154
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=97.82 E-value=6.5e-05 Score=65.51 Aligned_cols=77 Identities=25% Similarity=0.255 Sum_probs=59.5
Q ss_pred CHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 021739 175 TAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 175 ~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
..+.++.+.++|+|+|.++...+.. ......+..+.++++.+ ++|+++.|||++++++.+++++|||+|.++++++.
T Consensus 35 ~~~~a~~~~~~G~d~i~v~~~~~~~-~~~~~~~~~i~~i~~~~--~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~~~ 111 (253)
T 1h5y_A 35 PVEMAVRYEEEGADEIAILDITAAP-EGRATFIDSVKRVAEAV--SIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAVR 111 (253)
T ss_dssp HHHHHHHHHHTTCSCEEEEECCCCT-TTHHHHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccc-cCCcccHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEEChHHhh
Confidence 3567889999999999987532211 11123455667776665 79999999999999999999999999999998774
No 155
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=97.82 E-value=7.2e-05 Score=70.42 Aligned_cols=98 Identities=22% Similarity=0.292 Sum_probs=70.4
Q ss_pred ccccCHHHHHHHHHhcCCCEEEEecC--CHHHHHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEE
Q 021739 149 DRSLNWKDVKWLQTITSLPILVKGVL--TAEDASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFL 225 (308)
Q Consensus 149 d~~~~~~~i~~ir~~~~~Pv~vK~~~--~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia 225 (308)
|++...+.++++++. +.|++++... ..+.++.+.++|+|++.+.+....+....+ .++..+.++++.. ++||++
T Consensus 140 d~~~~~~~i~~~~~~-g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~--~~pvi~ 216 (393)
T 2qr6_A 140 DTELLSERIAQVRDS-GEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSL--DVPVIA 216 (393)
T ss_dssp CHHHHHHHHHHHHHT-TSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHC--SSCEEE
T ss_pred CHHHHHHHHHHHhhc-CCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhc--CCCEEE
Confidence 555556678888775 8899888763 345678888999999987643211111122 1455677777765 799999
Q ss_pred ecCCCCHHHHHHHHHcCCCEEEEch
Q 021739 226 DGGVRRGTDVFKALALGASGVFVGR 250 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~GAd~V~ig~ 250 (308)
||+.+++|+.+++++|||+|.+|+
T Consensus 217 -ggi~t~e~a~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 217 -GGVNDYTTALHMMRTGAVGIIVGG 240 (393)
T ss_dssp -ECCCSHHHHHHHHTTTCSEEEESC
T ss_pred -CCcCCHHHHHHHHHcCCCEEEECC
Confidence 999999999999999999999986
No 156
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=97.80 E-value=2.6e-05 Score=68.32 Aligned_cols=75 Identities=20% Similarity=0.110 Sum_probs=58.1
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
.+.++.+.++|+|.|.++...... ......+..+.+++ .. ++|+++.|||++.+++.++++.|||.|++|+.++.
T Consensus 33 ~~~a~~~~~~Gad~i~v~d~~~~~-~~~~~~~~~i~~i~-~~--~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~ 107 (241)
T 1qo2_A 33 VELVEKLIEEGFTLIHVVDLSNAI-ENSGENLPVLEKLS-EF--AEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVLE 107 (241)
T ss_dssp HHHHHHHHHTTCCCEEEEEHHHHH-HCCCTTHHHHHHGG-GG--GGGEEEESSCCSHHHHHHHHHTTCCEEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEEEecccccc-cCCchhHHHHHHHH-hc--CCcEEEECCCCCHHHHHHHHHCCCCEEEECchHhh
Confidence 466888899999999987532110 01224566677665 44 79999999999999999999999999999998775
No 157
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=97.80 E-value=0.00014 Score=63.61 Aligned_cols=75 Identities=27% Similarity=0.230 Sum_probs=58.7
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
.+.++.+.++|+|.|.+..-.+.. ...... ..+.++++.. ++|+++.|||++++++.+++.+|||.|.+|+..+.
T Consensus 35 ~~~a~~~~~~Gad~i~v~~~d~~~-~~~~~~-~~i~~i~~~~--~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l~ 109 (244)
T 1vzw_A 35 LEAALAWQRSGAEWLHLVDLDAAF-GTGDNR-ALIAEVAQAM--DIKVELSGGIRDDDTLAAALATGCTRVNLGTAALE 109 (244)
T ss_dssp HHHHHHHHHTTCSEEEEEEHHHHH-TSCCCH-HHHHHHHHHC--SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEEEecCchhh-cCCChH-HHHHHHHHhc--CCcEEEECCcCCHHHHHHHHHcCCCEEEECchHhh
Confidence 356788899999999987532211 112334 6677777765 79999999999999999999999999999997764
No 158
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.72 E-value=7e-05 Score=66.36 Aligned_cols=75 Identities=13% Similarity=0.148 Sum_probs=58.1
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHH
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVP 253 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l 253 (308)
.+.++.+.++|+|.|.++.-..... .....++.+.++++.. ++|+++.|||++.+|+.+++.+|||+|.+|+.++
T Consensus 33 ~~~a~~~~~~Ga~~i~v~d~~~~~~-~~g~~~~~i~~i~~~~--~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~~ 107 (266)
T 2w6r_A 33 RDWVVEVEKRGAGEILLTSIDRDGT-KSGYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADKALAASVFH 107 (266)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTSSC-SSCCCHHHHHHHGGGC--CSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC-
T ss_pred HHHHHHHHHCCCCEEEEEecCcccC-CCcccHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHHH
Confidence 4678888999999999965321111 1123567777776554 7999999999999999999999999999999877
No 159
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=97.71 E-value=0.00035 Score=60.67 Aligned_cols=67 Identities=12% Similarity=0.115 Sum_probs=52.4
Q ss_pred HHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHh
Q 021739 181 LAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 181 ~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
.+.-.|.+.|.+.. .|.. ...+.+.++++.+ .++|++..|||++++++.+++ .|||.|.+|+++...
T Consensus 148 ~a~~~g~~~VYld~-sG~~-----~~~~~i~~i~~~~-~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~~ 214 (228)
T 3vzx_A 148 VSELLQLPIFYLEY-SGVL-----GDIEAVKKTKAVL-ETSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYED 214 (228)
T ss_dssp HHHHTTCSEEEEEC-TTSC-----CCHHHHHHHHHHC-SSSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHHC
T ss_pred HHHHcCCCEEEecC-CCCc-----CCHHHHHHHHHhc-CCCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhcC
Confidence 33445789998876 3321 2577788887765 258999999999999999987 799999999999863
No 160
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=97.67 E-value=0.0004 Score=62.47 Aligned_cols=87 Identities=28% Similarity=0.308 Sum_probs=67.5
Q ss_pred HHHHHHHHhcC--CCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCH
Q 021739 155 KDVKWLQTITS--LPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRG 232 (308)
Q Consensus 155 ~~i~~ir~~~~--~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~ 232 (308)
+.++.+|+..+ .+|.+ .+-+.++++.+.++|+|+|.+.+- ..+.++++.+.++.++|+.++|||. .
T Consensus 184 ~av~~ar~~~~~~~~IgV-ev~t~eea~eA~~aGaD~I~ld~~----------~~~~~k~av~~v~~~ipi~AsGGIt-~ 251 (286)
T 1x1o_A 184 EAVRRAKARAPHYLKVEV-EVRSLEELEEALEAGADLILLDNF----------PLEALREAVRRVGGRVPLEASGNMT-L 251 (286)
T ss_dssp HHHHHHHHHSCTTSCEEE-EESSHHHHHHHHHHTCSEEEEESC----------CHHHHHHHHHHHTTSSCEEEESSCC-H
T ss_pred HHHHHHHHhCCCCCEEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEEcCCC-H
Confidence 45777877653 46665 557899999999999999988763 2344555555554579999999996 8
Q ss_pred HHHHHHHHcCCCEEEEchHHH
Q 021739 233 TDVFKALALGASGVFVGRPVP 253 (308)
Q Consensus 233 ~d~~k~l~~GAd~V~ig~~~l 253 (308)
+++.+..+.|+|.+.+|+...
T Consensus 252 eni~~~a~tGvD~IsVgs~~~ 272 (286)
T 1x1o_A 252 ERAKAAAEAGVDYVSVGALTH 272 (286)
T ss_dssp HHHHHHHHHTCSEEECTHHHH
T ss_pred HHHHHHHHcCCCEEEEcHHHc
Confidence 999999999999999987543
No 161
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=97.66 E-value=9.3e-05 Score=67.10 Aligned_cols=87 Identities=18% Similarity=0.159 Sum_probs=65.8
Q ss_pred HHHHHHHHhcC--CCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHcc---CCCeEEEecCC
Q 021739 155 KDVKWLQTITS--LPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAK---GRVPVFLDGGV 229 (308)
Q Consensus 155 ~~i~~ir~~~~--~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~---~~ipvia~GGI 229 (308)
+.++++|+..+ .++.+ .+-+.+++..+.++|+|+|.+++.+ .+.+.++++.+. .+++|.++|||
T Consensus 185 ~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~~----------~~~l~~~v~~l~~~~~~~~I~ASGGI 253 (299)
T 2jbm_A 185 KAVRAARQAADFALKVEV-ECSSLQEAVQAAEAGADLVLLDNFK----------PEELHPTATVLKAQFPSVAVEASGGI 253 (299)
T ss_dssp HHHHHHHHHHTTTSCEEE-EESSHHHHHHHHHTTCSEEEEESCC----------HHHHHHHHHHHHHHCTTSEEEEESSC
T ss_pred HHHHHHHHhCCcCCeEEE-ecCCHHHHHHHHHcCCCEEEECCCC----------HHHHHHHHHHhhccCCCeeEEEECCC
Confidence 45777777653 46665 5567899999999999999987631 344444444332 34999999999
Q ss_pred CCHHHHHHHHHcCCCEEEEchHHH
Q 021739 230 RRGTDVFKALALGASGVFVGRPVP 253 (308)
Q Consensus 230 ~~~~d~~k~l~~GAd~V~ig~~~l 253 (308)
+.+++.+..++|||.+.+|+.+.
T Consensus 254 -t~~ni~~~~~aGaD~i~vGs~i~ 276 (299)
T 2jbm_A 254 -TLDNLPQFCGPHIDVISMGMLTQ 276 (299)
T ss_dssp -CTTTHHHHCCTTCCEEECTHHHH
T ss_pred -CHHHHHHHHHCCCCEEEEChhhc
Confidence 89999999999999999999553
No 162
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=97.63 E-value=0.0042 Score=53.60 Aligned_cols=186 Identities=15% Similarity=0.132 Sum_probs=115.3
Q ss_pred HHHHHHHHHHcCCceeecCC------C---CCCH----HHHhccCCCCceEEeeecCCchHHHHHHHHHHHcCCcEEEEe
Q 021739 30 ECATARAASAAGTIMTLSSW------A---TSSV----EEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALT 96 (308)
Q Consensus 30 ~~~~a~~a~~~g~~~~~s~~------~---~~~~----e~i~~~~~~~~~~Ql~~~~d~~~~~~~~~~~~~~g~~~i~i~ 96 (308)
|..-.+.+.+.|.--.+||. + ..++ ++++..-+++..+|+. ..|.+.+.+..+++.+.+ +.+.|-
T Consensus 9 n~~ei~~~~~~g~i~GVTTNPsli~k~~~~g~~~~~~~~ei~~~v~G~Vs~EV~-a~d~e~mi~eA~~L~~~~-~nv~IK 86 (223)
T 3s1x_A 9 NIDEIRTGVNWGIVDGVTTNPTLISKEAVNGKKYGDIIREILKIVDGPVSVEVV-STKYEGMVEEARKIHGLG-DNAVVK 86 (223)
T ss_dssp CHHHHHHHHHHTCCCEEECCHHHHHHHSCTTCCHHHHHHHHHHHCSSCEEEECC-CCSHHHHHHHHHHHHHTC-TTEEEE
T ss_pred CHHHHHHHHhcCCcccccCCHHHHHhhhccCCCHHHHHHHHHHhCCCCEEEEEc-cCCHHHHHHHHHHHHHhC-CCEEEE
Confidence 55666777788876667654 1 2233 3454555677888887 567666666666666654 333443
Q ss_pred cCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhcCCCEEEEecCCH
Q 021739 97 VDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTA 176 (308)
Q Consensus 97 ~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~~~Pv~vK~~~~~ 176 (308)
+ |.. . + .++.++.+.+. ++++-+=.+++.
T Consensus 87 I--P~T------------------------------------~--e----------Gl~A~~~L~~~-GI~vn~TlifS~ 115 (223)
T 3s1x_A 87 I--PMT------------------------------------E--D----------GLRAIKTLSSE-HINTNCTLVFNP 115 (223)
T ss_dssp E--ESS------------------------------------H--H----------HHHHHHHHHHT-TCCEEEEEECSH
T ss_pred e--CCC------------------------------------H--H----------HHHHHHHHHHC-CCcEEEEEeCCH
Confidence 3 211 0 0 12344555443 788877778999
Q ss_pred HHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHH---HHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHH
Q 021739 177 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEV---VQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVP 253 (308)
Q Consensus 177 e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i---~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l 253 (308)
.++..+.++|+++|...- ||-.+++.+....+.++ .+....+..|++ ..+|+..++.++..+|||.+-+.-.++
T Consensus 116 ~QA~~Aa~AGa~yISPfv--gRi~d~g~dG~~~v~~i~~~~~~~~~~T~Ila-AS~Rn~~~v~~aa~~G~d~~Tip~~vl 192 (223)
T 3s1x_A 116 IQALLAAKAGVTYVSPFV--GRLDDIGEDGMQIIDMIRTIFNNYIIKTQILV-ASIRNPIHVLRSAVIGADVVTVPFNVL 192 (223)
T ss_dssp HHHHHHHHTTCSEEEEBS--HHHHHTTSCTHHHHHHHHHHHHHTTCCSEEEE-BSCCSHHHHHHHHHHTCSEEEECHHHH
T ss_pred HHHHHHHHcCCeEEEeec--chHhhcCCCHHHHHHHHHHHHHHcCCCCEEEE-EeCCCHHHHHHHHHcCCCEEEeCHHHH
Confidence 999999999999987532 33222232334444444 433333455555 669999999999999999999998888
Q ss_pred HhcccCC--HHHHHHHHHHH
Q 021739 254 FSLAVDG--EAGVRKVLQML 271 (308)
Q Consensus 254 ~~~~~~G--~~~v~~~i~~l 271 (308)
..+..+- ..+++++...|
T Consensus 193 ~~l~~hpltd~~~~~F~~Dw 212 (223)
T 3s1x_A 193 KSLMKHPKTDEGLAKFLEDW 212 (223)
T ss_dssp HHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHcCCcHHHHHHHHHHHH
Confidence 7764321 23455554444
No 163
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=97.62 E-value=0.0067 Score=51.96 Aligned_cols=172 Identities=18% Similarity=0.124 Sum_probs=111.4
Q ss_pred HHHHHHHHHHcCCceeecCC------C-CCCH----HHHhccCCCCceEEeeecCCchHHHHHHHHHHHcCCcEEEEecC
Q 021739 30 ECATARAASAAGTIMTLSSW------A-TSSV----EEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVD 98 (308)
Q Consensus 30 ~~~~a~~a~~~g~~~~~s~~------~-~~~~----e~i~~~~~~~~~~Ql~~~~d~~~~~~~~~~~~~~g~~~i~i~~~ 98 (308)
|..-.+.+.+.|.--.|||. + ..++ ++++..-+++..+|+. ..|.+.+.+..+++.+.+ +.+.|-+
T Consensus 9 n~~ei~~~~~~g~i~GVTTNPsli~k~~g~~~~~~~~eI~~~v~G~Vs~EV~-a~d~e~mi~ea~~l~~~~-~nv~IKI- 85 (212)
T 3r8r_A 9 NIDEIREANELGILAGVTTNPSLVAKEANVSFHDRLREITDVVKGSVSAEVI-SLKAEEMIEEGKELAKIA-PNITVKI- 85 (212)
T ss_dssp CHHHHHHHHHTTCEEEEECCHHHHHTSCSSCHHHHHHHHHHHCCSCEEEECC-CSSHHHHHHHHHHHHTTC-TTEEEEE-
T ss_pred CHHHHHHHHhcCCcccccCCHHHHHHccCCCHHHHHHHHHHhcCCCEEEEEe-cCCHHHHHHHHHHHHHhC-CCEEEEe-
Confidence 56677788889988878764 2 2233 3455555678888885 667776666666665554 3334433
Q ss_pred CCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhcCCCEEEEecCCHHH
Q 021739 99 TPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAED 178 (308)
Q Consensus 99 ~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~~~Pv~vK~~~~~e~ 178 (308)
|.. . + .++.++.+.+ -++++-+=.+++..+
T Consensus 86 -P~T------------------------------------~--e----------Gl~A~~~L~~-~GI~vn~TlifS~~Q 115 (212)
T 3r8r_A 86 -PMT------------------------------------S--D----------GLKAVRALTD-LGIKTNVTLIFNANQ 115 (212)
T ss_dssp -ESS------------------------------------H--H----------HHHHHHHHHH-TTCCEEEEEECSHHH
T ss_pred -CCC------------------------------------H--H----------HHHHHHHHHH-CCCcEEEEEeCCHHH
Confidence 211 0 0 1234455544 378887777899999
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHH---HccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHh
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQ---AAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~---~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
+..+.++|+++|...- ||-.+++.+....+.++.+ ....+..|++ -.+|+..++.++..+|||.+-+.-.++..
T Consensus 116 a~~Aa~AGa~yISPfv--gRi~d~~~dG~~~v~~i~~~~~~~~~~t~ila-AS~R~~~~v~~~a~~G~d~~Tip~~vl~~ 192 (212)
T 3r8r_A 116 ALLAARAGATYVSPFL--GRLDDIGHNGLDLISEVKQIFDIHGLDTQIIA-ASIRHPQHVTEAALRGAHIGTMPLKVIHA 192 (212)
T ss_dssp HHHHHHHTCSEEEEBH--HHHHHTTSCHHHHHHHHHHHHHHHTCCCEEEE-BSCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred HHHHHHcCCeEEEecc--chhhhcCCChHHHHHHHHHHHHHcCCCCEEEE-ecCCCHHHHHHHHHcCCCEEEcCHHHHHH
Confidence 9999999999986532 3322233334444544443 3333444554 67999999999999999999999888876
Q ss_pred cc
Q 021739 256 LA 257 (308)
Q Consensus 256 ~~ 257 (308)
+.
T Consensus 193 l~ 194 (212)
T 3r8r_A 193 LT 194 (212)
T ss_dssp HT
T ss_pred HH
Confidence 54
No 164
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=97.60 E-value=0.00035 Score=62.67 Aligned_cols=87 Identities=18% Similarity=0.233 Sum_probs=68.5
Q ss_pred HHHHHHHHhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHH
Q 021739 155 KDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGT 233 (308)
Q Consensus 155 ~~i~~ir~~~-~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~ 233 (308)
+.++++|+.. ..||.| .+-+.++++.+.++|+|.|.+.|. +.+.+.++.+.+..++++.++|||. .+
T Consensus 187 ~Av~~ar~~~~~~~IeV-Ev~tl~ea~eAl~aGaD~I~LDn~----------~~~~l~~av~~~~~~v~ieaSGGIt-~~ 254 (287)
T 3tqv_A 187 KAVTKAKKLDSNKVVEV-EVTNLDELNQAIAAKADIVMLDNF----------SGEDIDIAVSIARGKVALEVSGNID-RN 254 (287)
T ss_dssp HHHHHHHHHCTTSCEEE-EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTTCEEEEESSCC-TT
T ss_pred HHHHHHHhhCCCCcEEE-EeCCHHHHHHHHHcCCCEEEEcCC----------CHHHHHHHHHhhcCCceEEEECCCC-HH
Confidence 4566776653 567776 667889999999999999999773 2455666666666689999999994 78
Q ss_pred HHHHHHHcCCCEEEEchHHH
Q 021739 234 DVFKALALGASGVFVGRPVP 253 (308)
Q Consensus 234 d~~k~l~~GAd~V~ig~~~l 253 (308)
.+.+..+.|+|.+.+|....
T Consensus 255 ~i~~~a~tGVD~IsvGalt~ 274 (287)
T 3tqv_A 255 SIVAIAKTGVDFISVGAITK 274 (287)
T ss_dssp THHHHHTTTCSEEECSHHHH
T ss_pred HHHHHHHcCCCEEEEChhhc
Confidence 88888889999999997543
No 165
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=97.58 E-value=0.0045 Score=53.04 Aligned_cols=93 Identities=13% Similarity=0.078 Sum_probs=63.6
Q ss_pred HHHHHHHHhcCCCEEE--E-e--------cCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeE
Q 021739 155 KDVKWLQTITSLPILV--K-G--------VLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 155 ~~i~~ir~~~~~Pv~v--K-~--------~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipv 223 (308)
+.++++++.+++|++. | . ..+.+.+..+.++|+|+|.++...... ......+.+.++++.+ +..++
T Consensus 46 ~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~~~--p~~~~~~~i~~~~~~~-~~~~v 122 (223)
T 1y0e_A 46 EDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQQR--PKETLDELVSYIRTHA-PNVEI 122 (223)
T ss_dssp HHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCSCC--SSSCHHHHHHHHHHHC-TTSEE
T ss_pred HHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEEeeecccC--cccCHHHHHHHHHHhC-CCceE
Confidence 4578888888899842 1 1 134678889999999999886432110 0012345567776655 35666
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEEchHH
Q 021739 224 FLDGGVRRGTDVFKALALGASGVFVGRPV 252 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~GAd~V~ig~~~ 252 (308)
+. ++.+.+++.++...|+|.++++.+.
T Consensus 123 ~~--~~~t~~e~~~~~~~G~d~i~~~~~g 149 (223)
T 1y0e_A 123 MA--DIATVEEAKNAARLGFDYIGTTLHG 149 (223)
T ss_dssp EE--ECSSHHHHHHHHHTTCSEEECTTTT
T ss_pred Ee--cCCCHHHHHHHHHcCCCEEEeCCCc
Confidence 65 6789999999999999999876543
No 166
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.58 E-value=0.00015 Score=62.30 Aligned_cols=80 Identities=16% Similarity=0.045 Sum_probs=58.5
Q ss_pred cCCHHHHHHHHHcCCcEEEEecccccC---CCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 021739 173 VLTAEDASLAIQYGAAGIIVSNHGARQ---LDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 249 (308)
Q Consensus 173 ~~~~e~a~~~~~~G~d~i~v~~~gg~~---~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig 249 (308)
+.+.+++..+. .|+|+|.++.-.-+. ....+..++.+.++.+.+..++|+++.|||. ++++.+++.+||++|.++
T Consensus 95 ~~t~~e~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI~-~~nv~~~~~~Ga~gVav~ 172 (210)
T 3ceu_A 95 CHSVEEVKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMALGGIN-EDNLLEIKDFGFGGAVVL 172 (210)
T ss_dssp ECSHHHHHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEESSCC-TTTHHHHHHTTCSEEEES
T ss_pred cCCHHHHHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECCCC-HHHHHHHHHhCCCEEEEh
Confidence 46888888887 999999875421111 1111235667777665421379999999998 899999999999999999
Q ss_pred hHHHH
Q 021739 250 RPVPF 254 (308)
Q Consensus 250 ~~~l~ 254 (308)
|.+..
T Consensus 173 s~i~~ 177 (210)
T 3ceu_A 173 GDLWN 177 (210)
T ss_dssp HHHHT
T ss_pred HHhHc
Confidence 99875
No 167
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=97.57 E-value=0.0022 Score=55.03 Aligned_cols=94 Identities=11% Similarity=0.048 Sum_probs=61.7
Q ss_pred HHHHHHhcCCCEEEEec--CCHHHHHHHHHcCCcEEEEecccc---cCCCCCcchHHHHHHHHHHccCCCeEEEecCCCC
Q 021739 157 VKWLQTITSLPILVKGV--LTAEDASLAIQYGAAGIIVSNHGA---RQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR 231 (308)
Q Consensus 157 i~~ir~~~~~Pv~vK~~--~~~e~a~~~~~~G~d~i~v~~~gg---~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~ 231 (308)
++.+++ .+.++.+... .+....+.+.+.|.+.+++.-..- ...+ + ..+.+.++++....++||+++|||+
T Consensus 99 ~~~~~~-~g~~~~~~ll~~~t~~~~~~l~~~~~~~~vl~~a~~~~~~G~~-g--~~~~i~~lr~~~~~~~~i~v~GGI~- 173 (216)
T 1q6o_A 99 LDVAKE-FNGDVQIELTGYWTWEQAQQWRDAGIGQVVYHRSRDAQAAGVA-W--GEADITAIKRLSDMGFKVTVTGGLA- 173 (216)
T ss_dssp HHHHHH-TTCEEEEEECSCCCHHHHHHHHHTTCCEEEEECCHHHHHTTCC-C--CHHHHHHHHHHHHTTCEEEEESSCC-
T ss_pred HHHHHH-cCCCceeeeeeCCChhhHHHHHhcCcHHHHHHHHHHHHhcCCC-C--CHHHHHHHHHhcCCCCcEEEECCcC-
Confidence 445554 4666654433 335566777777888777632110 0111 1 2455556655554468999999998
Q ss_pred HHHHHHHHHcCCCEEEEchHHHHh
Q 021739 232 GTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 232 ~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
++.+.+++++|||.+.+||+++.+
T Consensus 174 ~~~~~~~~~aGad~ivvG~~I~~a 197 (216)
T 1q6o_A 174 LEDLPLFKGIPIHVFIAGRSIRDA 197 (216)
T ss_dssp GGGGGGGTTSCCSEEEESHHHHTS
T ss_pred hhhHHHHHHcCCCEEEEeehhcCC
Confidence 788889999999999999998863
No 168
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=97.56 E-value=0.00033 Score=59.83 Aligned_cols=77 Identities=14% Similarity=0.175 Sum_probs=57.5
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHh
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
.+.++.+...|+..+.+.+.+......+.. +..+.++.+.. ++|+|+.||+.+++|+.+++..||+.|++|++++..
T Consensus 133 ~~~i~~~~~~~~~~vli~~~~~~g~~~g~~-~~~i~~~~~~~--~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~~~ 209 (237)
T 3cwo_X 133 RDWVVEVEKRGAGEILLTSIDRDGTKSGYD-TEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFR 209 (237)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTCCSCCC-HHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHHTT
T ss_pred HHHHHHHhhcCCCeEEEEecCCCCcccccc-HHHHHHHHHhc--CCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHHcC
Confidence 356788888899877765522111112332 66677765543 799999999999999999999999999999999764
No 169
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=97.53 E-value=0.0029 Score=55.03 Aligned_cols=86 Identities=14% Similarity=0.075 Sum_probs=60.4
Q ss_pred HHHHHHHHHhcCCCEEE--Ee-------c--CCHHHHHHHHHcCCcEEEEecccccCCCCCcchH-HHHHHHHHHccCCC
Q 021739 154 WKDVKWLQTITSLPILV--KG-------V--LTAEDASLAIQYGAAGIIVSNHGARQLDYVPATV-MALEEVVQAAKGRV 221 (308)
Q Consensus 154 ~~~i~~ir~~~~~Pv~v--K~-------~--~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~-~~l~~i~~~~~~~i 221 (308)
.+.|+++|+.+++||+- |. . .+.+++..+.++|+|.|.+...... .+... +.+..+++ . .+
T Consensus 58 ~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~----~p~~l~~~i~~~~~-~--g~ 130 (229)
T 3q58_A 58 IENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRS----RPVDIDSLLTRIRL-H--GL 130 (229)
T ss_dssp HHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSC----CSSCHHHHHHHHHH-T--TC
T ss_pred HHHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEECccccC----ChHHHHHHHHHHHH-C--CC
Confidence 46789999999999872 31 1 3457899999999999987543211 12223 33344432 2 56
Q ss_pred eEEEecCCCCHHHHHHHHHcCCCEEEE
Q 021739 222 PVFLDGGVRRGTDVFKALALGASGVFV 248 (308)
Q Consensus 222 pvia~GGI~~~~d~~k~l~~GAd~V~i 248 (308)
++++ .+++.+++.++..+|||.+.+
T Consensus 131 ~v~~--~v~t~eea~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 131 LAMA--DCSTVNEGISCHQKGIEFIGT 155 (229)
T ss_dssp EEEE--ECSSHHHHHHHHHTTCSEEEC
T ss_pred EEEE--ecCCHHHHHHHHhCCCCEEEe
Confidence 6665 689999999999999999975
No 170
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=97.50 E-value=0.0018 Score=57.98 Aligned_cols=98 Identities=17% Similarity=0.072 Sum_probs=63.2
Q ss_pred ccccCHHHHHHHHHhcCCCEEEEec-----CC-HHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHc-
Q 021739 149 DRSLNWKDVKWLQTITSLPILVKGV-----LT-AED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAA- 217 (308)
Q Consensus 149 d~~~~~~~i~~ir~~~~~Pv~vK~~-----~~-~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~- 217 (308)
+.+...++|+++++.++ +..+|.+ ++ .+. ++.+.++|+|+|.-|.+.+ .+..+.+.+.-.++.+
T Consensus 133 ~~~~V~~eI~~v~~a~~-~~~lKVIlEt~~Lt~~e~i~~A~~ia~~AGADFVKTSTGf~----~~gAT~edV~lM~~~v~ 207 (297)
T 4eiv_A 133 GESRIRLLVSEVKKVVG-PKTLKVVLSGGELQGGDIISRAAVAALEGGADFLQTSSGLG----ATHATMFTVHLISIALR 207 (297)
T ss_dssp HHHHHHHHHHHHHHHHT-TSEEEEECCSSCCCCHHHHHHHHHHHHHHTCSEEECCCSSS----SCCCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHHHHHHHHHhCCCEEEcCCCCC----CCCCCHHHHHHHHHHHH
Confidence 34445678888888874 5678876 32 332 3667789999998764322 1223444333222222
Q ss_pred ---------------------cCCCeEEEe-cCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 021739 218 ---------------------KGRVPVFLD-GGVRRGTDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 218 ---------------------~~~ipvia~-GGI~~~~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
..++.|=++ |||||.+|+.+++.+..+ +|..|+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~tg~~vgvKAs~GGIrt~e~A~~~i~~~~e---lG~~wl~ 263 (297)
T 4eiv_A 208 EYMVRENERIRVEGINREGAAVRCIGIKIEVGDVHMAETADFLMQMIFE---NGPRSIV 263 (297)
T ss_dssp HHHCC------------------CCEEEEECTTCCHHHHHHHHHHHHHH---HCGGGCS
T ss_pred HHhccccccccccccccccccCCceeEEecCCCCCCHHHHHHHHHHHHH---hCccccC
Confidence 357999999 999999999999996554 5666553
No 171
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=97.49 E-value=0.0034 Score=54.65 Aligned_cols=86 Identities=21% Similarity=0.227 Sum_probs=60.2
Q ss_pred HHHHHHHHHhcCCCEEE--Ee-------c--CCHHHHHHHHHcCCcEEEEecccccCCCCCcchH-HHHHHHHHHccCCC
Q 021739 154 WKDVKWLQTITSLPILV--KG-------V--LTAEDASLAIQYGAAGIIVSNHGARQLDYVPATV-MALEEVVQAAKGRV 221 (308)
Q Consensus 154 ~~~i~~ir~~~~~Pv~v--K~-------~--~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~-~~l~~i~~~~~~~i 221 (308)
.+.|+++|+.+++||+- |. . .+.++++.+.++|+|.|.+...... .+... +.+..+++ . .+
T Consensus 58 ~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~----~p~~l~~~i~~~~~-~--g~ 130 (232)
T 3igs_A 58 IDNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQ----RPVAVEALLARIHH-H--HL 130 (232)
T ss_dssp HHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSC----CSSCHHHHHHHHHH-T--TC
T ss_pred HHHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECccccC----CHHHHHHHHHHHHH-C--CC
Confidence 46789999999999863 31 1 3457899999999999987543211 12223 33344332 2 56
Q ss_pred eEEEecCCCCHHHHHHHHHcCCCEEEE
Q 021739 222 PVFLDGGVRRGTDVFKALALGASGVFV 248 (308)
Q Consensus 222 pvia~GGI~~~~d~~k~l~~GAd~V~i 248 (308)
++++ .+++.+++.++..+|||.+.+
T Consensus 131 ~v~~--~v~t~eea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 131 LTMA--DCSSVDDGLACQRLGADIIGT 155 (232)
T ss_dssp EEEE--ECCSHHHHHHHHHTTCSEEEC
T ss_pred EEEE--eCCCHHHHHHHHhCCCCEEEE
Confidence 6665 689999999999999999975
No 172
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=97.48 E-value=9.9e-05 Score=66.76 Aligned_cols=87 Identities=21% Similarity=0.164 Sum_probs=53.3
Q ss_pred HHHHHHHHHhcC--CCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCC------CeEEE
Q 021739 154 WKDVKWLQTITS--LPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGR------VPVFL 225 (308)
Q Consensus 154 ~~~i~~ir~~~~--~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~------ipvia 225 (308)
.+.++++|+..+ .++.+ .+-+.+++..+.++|+|+|.+++.+ .+.+.++++.+... ++|.+
T Consensus 186 ~~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~~----------~~~l~~~v~~l~~~~~g~~~v~I~A 254 (294)
T 3c2e_A 186 TNAVKNARAVCGFAVKIEV-ECLSEDEATEAIEAGADVIMLDNFK----------GDGLKMCAQSLKNKWNGKKHFLLEC 254 (294)
T ss_dssp HHHHHHHHHHHCTTSCEEE-ECSSSHHHHHHHHHTCSEEECCC-------------------------------CCEEEE
T ss_pred HHHHHHHHHhcCcCCeEEE-ecCCHHHHHHHHHcCCCEEEECCCC----------HHHHHHHHHHhcccccCCCCeEEEE
Confidence 345777777654 46665 4556688999999999999986531 23334433434323 89999
Q ss_pred ecCCCCHHHHHHHHHcCCCEEEEchHH
Q 021739 226 DGGVRRGTDVFKALALGASGVFVGRPV 252 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~GAd~V~ig~~~ 252 (308)
+||| +.+++.+..++|+|.+.+|+.+
T Consensus 255 SGGI-t~~ni~~~~~~GvD~i~vGs~i 280 (294)
T 3c2e_A 255 SGGL-NLDNLEEYLCDDIDIYSTSSIH 280 (294)
T ss_dssp ECCC-CC------CCCSCSEEECGGGT
T ss_pred ECCC-CHHHHHHHHHcCCCEEEEechh
Confidence 9999 8999999999999999999875
No 173
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=97.48 E-value=0.00093 Score=60.75 Aligned_cols=86 Identities=20% Similarity=0.257 Sum_probs=68.1
Q ss_pred HHHHHHHHhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHH
Q 021739 155 KDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGT 233 (308)
Q Consensus 155 ~~i~~ir~~~-~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~ 233 (308)
+.++++|+.. ..||.+ .+-+.++++.+.++|+|.|.+.|. +.+.+.++.+.+..++++.++|||. .+
T Consensus 220 ~Av~~ar~~~p~~kIeV-EVdtldea~eAl~aGaD~I~LDn~----------~~~~l~~av~~l~~~v~ieaSGGIt-~~ 287 (320)
T 3paj_A 220 QAISTAKQLNPGKPVEV-ETETLAELEEAISAGADIIMLDNF----------SLEMMREAVKINAGRAALENSGNIT-LD 287 (320)
T ss_dssp HHHHHHHHHSTTSCEEE-EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTSSEEEEESSCC-HH
T ss_pred HHHHHHHHhCCCCeEEE-EECCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEECCCC-HH
Confidence 4577777765 456655 567889999999999999999773 3456677766666689999999997 88
Q ss_pred HHHHHHHcCCCEEEEchHH
Q 021739 234 DVFKALALGASGVFVGRPV 252 (308)
Q Consensus 234 d~~k~l~~GAd~V~ig~~~ 252 (308)
.+.+..+.|+|.+.+|+..
T Consensus 288 ~I~~~a~tGVD~isvGalt 306 (320)
T 3paj_A 288 NLKECAETGVDYISVGALT 306 (320)
T ss_dssp HHHHHHTTTCSEEECTHHH
T ss_pred HHHHHHHcCCCEEEECcee
Confidence 8888888999999999843
No 174
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=97.47 E-value=0.0017 Score=55.39 Aligned_cols=80 Identities=20% Similarity=0.248 Sum_probs=54.9
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCC-HHHHHHHHHcCCCEEEEchHHHHhcc
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR-GTDVFKALALGASGVFVGRPVPFSLA 257 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~-~~d~~k~l~~GAd~V~ig~~~l~~~~ 257 (308)
+....+.|++++.++.+ ..+.+.++++... .-+++.+|||+. +.++.+++++|||.+.+||+++.+
T Consensus 125 ~~~a~~~G~~G~~~~~~----------~~~~i~~lr~~~~-~~~~iv~gGI~~~g~~~~~~~~aGad~vvvGr~I~~a-- 191 (208)
T 2czd_A 125 IEVANEIEPFGVIAPGT----------RPERIGYIRDRLK-EGIKILAPGIGAQGGKAKDAVKAGADYIIVGRAIYNA-- 191 (208)
T ss_dssp HHHHHHHCCSEEECCCS----------STHHHHHHHHHSC-TTCEEEECCCCSSTTHHHHHHHHTCSEEEECHHHHTS--
T ss_pred HHHHHHhCCcEEEECCC----------ChHHHHHHHHhCC-CCeEEEECCCCCCCCCHHHHHHcCCCEEEEChHHhcC--
Confidence 56777899999976543 1234555655553 234679999986 458999999999999999999864
Q ss_pred cCCHHHHHHHHHHHHHHH
Q 021739 258 VDGEAGVRKVLQMLRDEF 275 (308)
Q Consensus 258 ~~G~~~v~~~i~~l~~~l 275 (308)
.++ .+.++.+++++
T Consensus 192 -~dp---~~~~~~l~~~i 205 (208)
T 2czd_A 192 -PNP---REAAKAIYDEI 205 (208)
T ss_dssp -SSH---HHHHHHHHHHH
T ss_pred -CCH---HHHHHHHHHHH
Confidence 233 34445555443
No 175
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=97.47 E-value=0.0054 Score=57.26 Aligned_cols=121 Identities=15% Similarity=0.112 Sum_probs=90.7
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
.+++.+.+.++++.+.||+.+.+++++ ++..
T Consensus 146 ~~~e~~~~~a~~~~~~Gf~~iKik~g~-------------------------------------------------~~~~ 176 (384)
T 2pgw_A 146 ETAEELARDAAVGHAQGERVFYLKVGR-------------------------------------------------GEKL 176 (384)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEECCS-------------------------------------------------CHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcCC-------------------------------------------------CHHH
Confidence 467778788888888999999987653 1112
Q ss_pred CHHHHHHHHHhc-CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEE
Q 021739 153 NWKDVKWLQTIT-SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 225 (308)
Q Consensus 153 ~~~~i~~ir~~~-~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia 225 (308)
..+.++.+|+.+ ++||.+... .+.++ ++.+.+.|+++|. +. ..+..++.+.++++.+ ++||++
T Consensus 177 ~~e~v~avr~a~gd~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~~~~~~~~l~~~~--~iPI~~ 246 (384)
T 2pgw_A 177 DLEITAAVRGEIGDARLRLDANEGWSVHDAINMCRKLEKYDIEFIE-------QP-TVSWSIPAMAHVREKV--GIPIVA 246 (384)
T ss_dssp HHHHHHHHHTTSTTCEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE-------CC-SCTTCHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHHHHHHHcCCcEEEEecCCCCCHHHHHHHHHHHHhcCCCEEe-------CC-CChhhHHHHHHHHhhC--CCCEEE
Confidence 246789999888 688887743 45544 5677788999885 11 1223577788887776 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEchHH
Q 021739 226 DGGVRRGTDVFKALALG-ASGVFVGRPV 252 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~G-Ad~V~ig~~~ 252 (308)
++.+.+..|+.++++.| +|.|++....
T Consensus 247 de~i~~~~~~~~~i~~~~~d~v~ik~~~ 274 (384)
T 2pgw_A 247 DQAAFTLYDVYEICRQRAADMICIGPRE 274 (384)
T ss_dssp STTCCSHHHHHHHHHTTCCSEEEECHHH
T ss_pred eCCcCCHHHHHHHHHcCCCCEEEEcchh
Confidence 99999999999999987 8999997644
No 176
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=97.44 E-value=0.0016 Score=60.58 Aligned_cols=120 Identities=18% Similarity=0.162 Sum_probs=89.4
Q ss_pred CchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccC
Q 021739 74 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 153 (308)
Q Consensus 74 d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 153 (308)
+++.+.+.++++.+.|++.+-++++++ +++..
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~------------------------------------------------~~~~~ 177 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRP------------------------------------------------DLKED 177 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCS------------------------------------------------SHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCC------------------------------------------------CHHHH
Confidence 677777777888889999998887542 11123
Q ss_pred HHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEE
Q 021739 154 WKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 225 (308)
Q Consensus 154 ~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia 225 (308)
.+.++.+|+.+ +++|.++.. .+.++ ++.+.+.|+++|. +. ..+..++.+.++++.+ ++||++
T Consensus 178 ~e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPI~~ 247 (371)
T 2ovl_A 178 VDRVSALREHLGDSFPLMVDANMKWTVDGAIRAARALAPFDLHWIE-------EP-TIPDDLVGNARIVRES--GHTIAG 247 (371)
T ss_dssp HHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------CC-SCTTCHHHHHHHHHHH--CSCEEE
T ss_pred HHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------CC-CCcccHHHHHHHHhhC--CCCEEe
Confidence 46789999876 689998864 45544 5667788999884 10 1123577778887776 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEchH
Q 021739 226 DGGVRRGTDVFKALALG-ASGVFVGRP 251 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~G-Ad~V~ig~~ 251 (308)
++.+.+..|+.+++..| +|.|++...
T Consensus 248 dE~~~~~~~~~~~i~~~~~d~v~ik~~ 274 (371)
T 2ovl_A 248 GENLHTLYDFHNAVRAGSLTLPEPDVS 274 (371)
T ss_dssp CTTCCSHHHHHHHHHHTCCSEECCCTT
T ss_pred CCCCCCHHHHHHHHHcCCCCEEeeCcc
Confidence 99999999999999987 899998653
No 177
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=97.41 E-value=0.0013 Score=60.85 Aligned_cols=120 Identities=17% Similarity=0.194 Sum_probs=89.1
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
.+++.+.+.++++.+.|++.+.++++++ +++.
T Consensus 143 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~------------------------------------------------~~~~ 174 (359)
T 1mdl_A 143 DGVKLATERAVTAAELGFRAVKTRIGYP------------------------------------------------ALDQ 174 (359)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCCS------------------------------------------------SHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCC------------------------------------------------CHHH
Confidence 4567777777778889999999887542 1122
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEE
Q 021739 153 NWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 224 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvi 224 (308)
..+.++.+|+.+ ++||.++.. .+.++ ++.+.+.|+++|. +. ..+..++.+.++++.+ ++||+
T Consensus 175 ~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------~P-~~~~~~~~~~~l~~~~--~iPI~ 244 (359)
T 1mdl_A 175 DLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVTWIE-------EP-TLQHDYEGHQRIQSKL--NVPVQ 244 (359)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHHTCSCEE-------CC-SCTTCHHHHHHHHHTC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCCeEE-------CC-CChhhHHHHHHHHHhC--CCCEE
Confidence 346789999876 688988864 45544 5677888999884 10 1123577778887765 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 225 LDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 225 a~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
+++.+.+..|+.+++..| +|.|++-.
T Consensus 245 ~de~~~~~~~~~~~i~~~~~d~v~ik~ 271 (359)
T 1mdl_A 245 MGENWLGPEEMFKALSIGACRLAMPDA 271 (359)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCBT
T ss_pred eCCCCCCHHHHHHHHHcCCCCEEeecc
Confidence 999999999999999987 89999865
No 178
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=97.37 E-value=0.00029 Score=63.35 Aligned_cols=87 Identities=22% Similarity=0.186 Sum_probs=66.1
Q ss_pred HHHHHHHHhcC--CCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHcc---CCCeEEEecCC
Q 021739 155 KDVKWLQTITS--LPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAK---GRVPVFLDGGV 229 (308)
Q Consensus 155 ~~i~~ir~~~~--~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~---~~ipvia~GGI 229 (308)
+.++++|+..+ .+|.+ .+-+.++++.+.++|+|+|.+.|- +.+.+.++.+.+. .++|+.++|||
T Consensus 181 ~av~~ar~~~~~~~~I~V-EV~tleea~eA~~aGaD~I~LDn~----------~~e~l~~av~~l~~~~~~v~ieASGGI 249 (285)
T 1o4u_A 181 RAVQEVRKIIPFTTKIEV-EVENLEDALRAVEAGADIVMLDNL----------SPEEVKDISRRIKDINPNVIVEVSGGI 249 (285)
T ss_dssp HHHHHHHTTSCTTSCEEE-EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred HHHHHHHHhCCCCceEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhhccCCCceEEEECCC
Confidence 45777777652 56666 567899999999999999998773 2344444444432 37999999999
Q ss_pred CCHHHHHHHHHcCCCEEEEchHHH
Q 021739 230 RRGTDVFKALALGASGVFVGRPVP 253 (308)
Q Consensus 230 ~~~~d~~k~l~~GAd~V~ig~~~l 253 (308)
. .+.+.+..+.|+|.+.+|+...
T Consensus 250 t-~eni~~~a~tGVD~IsvGslt~ 272 (285)
T 1o4u_A 250 T-EENVSLYDFETVDVISSSRLTL 272 (285)
T ss_dssp C-TTTGGGGCCTTCCEEEEGGGTS
T ss_pred C-HHHHHHHHHcCCCEEEEeHHHc
Confidence 5 7888888889999999998554
No 179
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=97.34 E-value=0.00061 Score=59.71 Aligned_cols=73 Identities=12% Similarity=0.141 Sum_probs=56.2
Q ss_pred CHHHHHHHHHcCC----cEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 021739 175 TAEDASLAIQYGA----AGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGR 250 (308)
Q Consensus 175 ~~e~a~~~~~~G~----d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~ 250 (308)
+++.++...++|. .+|.+.. .|. ....+.+.++++.+ .++|++..|||++++++.+++. |||.|.+|+
T Consensus 140 ~~~~~~~~a~~g~~~~~~~VYl~s-~G~-----~~~~~~i~~i~~~~-~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGS 211 (240)
T 1viz_A 140 NMDDIVAYARVSELLQLPIFYLEY-SGV-----LGDIEAVKKTKAVL-ETSTLFYGGGIKDAETAKQYAE-HADVIVVGN 211 (240)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC-TTS-----CCCHHHHHHHHHTC-SSSEEEEESSCCSHHHHHHHHT-TCSEEEECT
T ss_pred CHHHHHHHHHhCcccCCCEEEEeC-CCc-----cChHHHHHHHHHhc-CCCCEEEEeccCCHHHHHHHHh-CCCEEEECh
Confidence 3567777776663 6776655 332 34567788887653 2689999999999999999888 999999999
Q ss_pred HHHHh
Q 021739 251 PVPFS 255 (308)
Q Consensus 251 ~~l~~ 255 (308)
+++..
T Consensus 212 a~v~~ 216 (240)
T 1viz_A 212 AVYED 216 (240)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 99864
No 180
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=97.33 E-value=0.0012 Score=59.30 Aligned_cols=86 Identities=13% Similarity=0.149 Sum_probs=67.8
Q ss_pred HHHHHHHHhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHH
Q 021739 155 KDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGT 233 (308)
Q Consensus 155 ~~i~~ir~~~-~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~ 233 (308)
+.++++|+.. ..||.| .+-+.++++.+.++|+|.|.+.|- +.+.+.++.+.+..++.+.+||||. .+
T Consensus 196 ~Av~~ar~~~p~~kIeV-Ev~tl~e~~eAl~aGaDiImLDn~----------s~~~l~~av~~~~~~v~leaSGGIt-~~ 263 (300)
T 3l0g_A 196 LAIQRLRKNLKNEYIAI-ECDNISQVEESLSNNVDMILLDNM----------SISEIKKAVDIVNGKSVLEVSGCVN-IR 263 (300)
T ss_dssp HHHHHHHHHSSSCCEEE-EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTSSEEEEESSCC-TT
T ss_pred HHHHHHHHhCCCCCEEE-EECCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHhhcCceEEEEECCCC-HH
Confidence 4577777764 456655 567889999999999999999873 2456666666666689999999995 78
Q ss_pred HHHHHHHcCCCEEEEchHH
Q 021739 234 DVFKALALGASGVFVGRPV 252 (308)
Q Consensus 234 d~~k~l~~GAd~V~ig~~~ 252 (308)
.+.+..+.|+|.+.+|+..
T Consensus 264 ~i~~~A~tGVD~IsvGalt 282 (300)
T 3l0g_A 264 NVRNIALTGVDYISIGCIT 282 (300)
T ss_dssp THHHHHTTTCSEEECGGGT
T ss_pred HHHHHHHcCCCEEEeCccc
Confidence 8888888999999999744
No 181
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=97.32 E-value=0.0021 Score=58.32 Aligned_cols=91 Identities=26% Similarity=0.174 Sum_probs=60.7
Q ss_pred HHHHHhcCCCEEEEec-----C----CH----H-HHHHHHHcCCcEEEEecc-cccCCCCCcchHHHHHHHHHHc-c-CC
Q 021739 158 KWLQTITSLPILVKGV-----L----TA----E-DASLAIQYGAAGIIVSNH-GARQLDYVPATVMALEEVVQAA-K-GR 220 (308)
Q Consensus 158 ~~ir~~~~~Pv~vK~~-----~----~~----e-~a~~~~~~G~d~i~v~~~-gg~~~~~~~~~~~~l~~i~~~~-~-~~ 220 (308)
.+..+.+++|+++=.. . ++ . .++.+.+.|+|++.+.-. .++ .+++.+.++.+.. . ..
T Consensus 148 ~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~iKv~~~~~~~------g~~~~~~~vv~~~~~~~~ 221 (304)
T 1to3_A 148 NELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADLYKVEMPLYGK------GARSDLLTASQRLNGHIN 221 (304)
T ss_dssp HHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSEEEECCGGGGC------SCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCCEEEeCCCcCCC------CCHHHHHHHHHhccccCC
Confidence 3333456899877643 1 12 2 377888899999987532 111 1455555555441 1 27
Q ss_pred Ce-EEEecCCCCHH----HHHHHHHcCCCEEEEchHHHHh
Q 021739 221 VP-VFLDGGVRRGT----DVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 221 ip-via~GGI~~~~----d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
+| |+..||+ +.+ .+..++..||+.|.+||.+...
T Consensus 222 ~P~Vv~aGG~-~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~ 260 (304)
T 1to3_A 222 MPWVILSSGV-DEKLFPRAVRVAMEAGASGFLAGRAVWSS 260 (304)
T ss_dssp SCEEECCTTS-CTTTHHHHHHHHHHTTCCEEEESHHHHGG
T ss_pred CCeEEEecCC-CHHHHHHHHHHHHHcCCeEEEEehHHhCc
Confidence 89 9999999 553 4777888999999999998864
No 182
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=97.29 E-value=0.002 Score=63.00 Aligned_cols=81 Identities=16% Similarity=0.055 Sum_probs=59.9
Q ss_pred CCHHHHHHHHHcC---CcEEEEecccccCCC--C--CcchHHHHHHHHHHc----cCCCeEEEecCCCCHHHHHHHHH--
Q 021739 174 LTAEDASLAIQYG---AAGIIVSNHGARQLD--Y--VPATVMALEEVVQAA----KGRVPVFLDGGVRRGTDVFKALA-- 240 (308)
Q Consensus 174 ~~~e~a~~~~~~G---~d~i~v~~~gg~~~~--~--~~~~~~~l~~i~~~~----~~~ipvia~GGI~~~~d~~k~l~-- 240 (308)
-+.+++..+.+.| +|+|.++.-.-+... . .+..++.+.++.+.+ ..++|+++.||| +.+++.+++.
T Consensus 116 ht~eea~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v~~~~ 194 (540)
T 3nl6_A 116 GFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERVLYQC 194 (540)
T ss_dssp CSHHHHHHHHHTCC--CCEEEESCCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHHHHHC
T ss_pred CCHHHHHHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHHHHhh
Confidence 6899999999999 999988543222111 1 122456666665543 137999999999 7899999998
Q ss_pred ------cCCCEEEEchHHHHh
Q 021739 241 ------LGASGVFVGRPVPFS 255 (308)
Q Consensus 241 ------~GAd~V~ig~~~l~~ 255 (308)
.||++|.+++.++.+
T Consensus 195 ~~~g~~~GadgvAVvsaI~~a 215 (540)
T 3nl6_A 195 VSSNGKRSLDGICVVSDIIAS 215 (540)
T ss_dssp BCTTSSCBCSCEEESHHHHTC
T ss_pred cccccccCceEEEEeHHHhcC
Confidence 799999999998753
No 183
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=97.27 E-value=0.0019 Score=56.02 Aligned_cols=101 Identities=21% Similarity=0.327 Sum_probs=69.6
Q ss_pred HHHHHHHHHhcCCCEEEEecCCHHH---------HHHHHHcCCcEEEEecccccC-------------------------
Q 021739 154 WKDVKWLQTITSLPILVKGVLTAED---------ASLAIQYGAAGIIVSNHGARQ------------------------- 199 (308)
Q Consensus 154 ~~~i~~ir~~~~~Pv~vK~~~~~e~---------a~~~~~~G~d~i~v~~~gg~~------------------------- 199 (308)
...+..+++.+++||..|. .++++ +..+.+.|+|++.+.-.-+|.
T Consensus 48 ~~~L~~v~~~~~i~v~aQd-v~~~~~Ga~TGeis~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVge 126 (225)
T 1hg3_A 48 LVDLRMIAESVEIPVFAQH-IDPIKPGSHTGHVLPEAVKEAGAVGTLLNHSENRMILADLEAAIRRAEEVGLMTMVCSNN 126 (225)
T ss_dssp HHHHHHHHHSCSSCBEESC-CCSCCSBSCTTCCCHHHHHHTTCCEEEESCGGGCCBHHHHHHHHHHHHHHTCEEEEEESS
T ss_pred HHHHHHHHHhcCCceeeee-CCcccCCCccCcccHHHHHHcCCCEEEECcchhcCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4567778777789999888 34444 778888899988773211100
Q ss_pred --------------------CC--CC----cchHHHHHHH---HHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 021739 200 --------------------LD--YV----PATVMALEEV---VQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGR 250 (308)
Q Consensus 200 --------------------~~--~~----~~~~~~l~~i---~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~ 250 (308)
+. .+ ..+.+.+.+. .+....+++++..|||.+..|+..+...|+|++.+|+
T Consensus 127 ~~e~~~~~~~~~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~ 206 (225)
T 1hg3_A 127 PAVSAAVAALNPDYVAVEPPELIGTGIPVSKAKPEVITNTVELVKKVNPEVKVLCGAGISTGEDVKKAIELGTVGVLLAS 206 (225)
T ss_dssp HHHHHHHHTTCCSEEEECCTTTTTTSCCTTTSCTHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEESH
T ss_pred HHHHHHHhcCCCCEEEEeChhhhccCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCH
Confidence 00 12 2222323332 2233357999999999999999999999999999999
Q ss_pred HHHHh
Q 021739 251 PVPFS 255 (308)
Q Consensus 251 ~~l~~ 255 (308)
+++.+
T Consensus 207 a~l~a 211 (225)
T 1hg3_A 207 GVTKA 211 (225)
T ss_dssp HHHTC
T ss_pred HHHCC
Confidence 99975
No 184
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=97.25 E-value=0.0011 Score=59.67 Aligned_cols=86 Identities=20% Similarity=0.327 Sum_probs=65.5
Q ss_pred HHHHHHHHhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHH
Q 021739 155 KDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGT 233 (308)
Q Consensus 155 ~~i~~ir~~~-~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~ 233 (308)
+.++++|+.. ..||.+ .+-+.++++.+.++|+|.|.+.|. +.+.+.++.+.+..++++.++|||. .+
T Consensus 198 ~Av~~~r~~~p~~~ieV-Evdtlde~~eAl~aGaD~I~LDn~----------~~~~l~~av~~i~~~v~ieaSGGI~-~~ 265 (298)
T 3gnn_A 198 EALDAAFALNAEVPVQI-EVETLDQLRTALAHGARSVLLDNF----------TLDMMRDAVRVTEGRAVLEVSGGVN-FD 265 (298)
T ss_dssp HHHHHHHHHC--CCCEE-EESSHHHHHHHHHTTCEEEEEESC----------CHHHHHHHHHHHTTSEEEEEESSCS-TT
T ss_pred HHHHHHHHhCCCCCEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEEcCCC-HH
Confidence 4577777764 345443 356889999999999999999773 2455666655555689999999994 78
Q ss_pred HHHHHHHcCCCEEEEchHH
Q 021739 234 DVFKALALGASGVFVGRPV 252 (308)
Q Consensus 234 d~~k~l~~GAd~V~ig~~~ 252 (308)
.+.+..+.|+|.+.+|+..
T Consensus 266 ~i~~~a~tGVD~isvG~lt 284 (298)
T 3gnn_A 266 TVRAIAETGVDRISIGALT 284 (298)
T ss_dssp THHHHHHTTCSEEECGGGG
T ss_pred HHHHHHHcCCCEEEECCee
Confidence 8888888999999999843
No 185
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1
Probab=97.23 E-value=0.033 Score=48.29 Aligned_cols=115 Identities=19% Similarity=0.141 Sum_probs=75.5
Q ss_pred HHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHH---HHHccCCCeEEEecCCCCH
Q 021739 156 DVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEV---VQAAKGRVPVFLDGGVRRG 232 (308)
Q Consensus 156 ~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i---~~~~~~~ipvia~GGI~~~ 232 (308)
.++.+.+. ++++-+=.+++.+.+..+.++|++++...- ||-.+.+.+....+.++ .+....+..+++. +++++
T Consensus 105 Ai~~L~~e-GI~vNvTliFS~~QA~laa~AGa~~iSpFV--gRidd~g~dG~~~v~~i~~~~~~~~~~t~iL~A-S~r~~ 180 (230)
T 1vpx_A 105 AVKTLSAE-GIKTNVTLVFSPAQAILAAKAGATYVSPFV--GRMDDLSNDGMRMLGEIVEIYNNYGFETEIIAA-SIRHP 180 (230)
T ss_dssp HHHHHHHT-TCCEEEEEECSHHHHHHHHHHTCSEEEEBH--HHHHHTTSCHHHHHHHHHHHHHHHTCSCEEEEB-SCCSH
T ss_pred HHHHHHHC-CCCEEEEEeCCHHHHHHHHhCCCeEEEecc--chhhhccccHHHHHHHHHHHHHHcCCCeEEEee-ccCCH
Confidence 34444433 788877778999999999999999987653 22111222233444444 3333334556664 59999
Q ss_pred HHHHHHHHcCCCEEEEchHHHHhcccCC--HHHHHHHHHHHHHH
Q 021739 233 TDVFKALALGASGVFVGRPVPFSLAVDG--EAGVRKVLQMLRDE 274 (308)
Q Consensus 233 ~d~~k~l~~GAd~V~ig~~~l~~~~~~G--~~~v~~~i~~l~~~ 274 (308)
.++.++...|||.+-+.-.++..+...+ .++++++.+.+.+-
T Consensus 181 ~~v~~~~l~G~d~~Tip~~~l~~l~~h~lt~~gv~~F~~d~~~~ 224 (230)
T 1vpx_A 181 MHVVEAALMGVDIVTMPFAVLEKLFKHPMTDLGIERFMEDWKKY 224 (230)
T ss_dssp HHHHHHHHHTCSEEEECHHHHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEECCHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999888888765444 24555555555443
No 186
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=97.23 E-value=0.001 Score=61.21 Aligned_cols=132 Identities=12% Similarity=0.082 Sum_probs=82.0
Q ss_pred HcCCceeecCCCCCCHHHHhccCCCCceEEeeecCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCc
Q 021739 39 AAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPH 118 (308)
Q Consensus 39 ~~g~~~~~s~~~~~~~e~i~~~~~~~~~~Ql~~~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~ 118 (308)
++..|++++.|+..+.++++.......|+|+|...+++.+.++++++++.|+.. .++++ .
T Consensus 44 ~l~~Pi~~a~mag~s~~~la~a~~~~gg~g~~~~~~~~~~~~~i~~~~~~g~~v-~v~~g-----~-------------- 103 (336)
T 1ypf_A 44 KFKLPVVPANMQTIIDERIATYLAENNYFYIMHRFQPEKRISFIRDMQSRGLIA-SISVG-----V-------------- 103 (336)
T ss_dssp EESSSEEECSSTTTCCHHHHHHHHHTTCCCCCCCSSGGGHHHHHHHHHHTTCCC-EEEEC-----C--------------
T ss_pred EecCcEEECCCCCCChHHHHHHHHhCCCEEEecCCCCHHHHHHHHHHHhcCCeE-EEeCC-----C--------------
Confidence 455678888887777777754212245778887677777777777776655311 11110 0
Q ss_pred cccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcC--CcEEEEeccc
Q 021739 119 LTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYG--AAGIIVSNHG 196 (308)
Q Consensus 119 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G--~d~i~v~~~g 196 (308)
+ .+.+ +.++.+.++| ++.|.+....
T Consensus 104 ------------------------------~----~~~~-------------------~~a~~~~~~g~~~~~i~i~~~~ 130 (336)
T 1ypf_A 104 ------------------------------K----EDEY-------------------EFVQQLAAEHLTPEYITIDIAH 130 (336)
T ss_dssp ------------------------------S----HHHH-------------------HHHHHHHHTTCCCSEEEEECSS
T ss_pred ------------------------------C----HHHH-------------------HHHHHHHhcCCCCCEEEEECCC
Confidence 0 0011 2355666778 8888764311
Q ss_pred ccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 021739 197 ARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 249 (308)
Q Consensus 197 g~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig 249 (308)
| .....++.+.++++.. ..|++..|.+.+.+++.++.++|||++.++
T Consensus 131 G----~~~~~~~~i~~lr~~~--~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs 177 (336)
T 1ypf_A 131 G----HSNAVINMIQHIKKHL--PESFVIAGNVGTPEAVRELENAGADATKVG 177 (336)
T ss_dssp C----CSHHHHHHHHHHHHHC--TTSEEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred C----CcHHHHHHHHHHHHhC--CCCEEEECCcCCHHHHHHHHHcCCCEEEEe
Confidence 1 1224567788887765 324444566999999999999999999993
No 187
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=97.23 E-value=0.0025 Score=55.36 Aligned_cols=113 Identities=10% Similarity=0.103 Sum_probs=73.5
Q ss_pred HHHH---HHHHhcCCCEEEEec--CCHHHHHHHHHcC-CcEEEEec-ccccC-CCCCcchHHHHHHHHHHccCCCeEEEe
Q 021739 155 KDVK---WLQTITSLPILVKGV--LTAEDASLAIQYG-AAGIIVSN-HGARQ-LDYVPATVMALEEVVQAAKGRVPVFLD 226 (308)
Q Consensus 155 ~~i~---~ir~~~~~Pv~vK~~--~~~e~a~~~~~~G-~d~i~v~~-~gg~~-~~~~~~~~~~l~~i~~~~~~~ipvia~ 226 (308)
+.++ .+|+. +.-+.+-.. ...+.++.+.+.| +|.|.+.. +.|.. -...+...+-+.++++... +++|.++
T Consensus 102 ~~i~~~~~i~~~-G~k~gvalnp~tp~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~ki~~lr~~~~-~~~I~Vd 179 (227)
T 1tqx_A 102 RCIQLAKEIRDN-NLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYK-NLNIQVD 179 (227)
T ss_dssp HHHHHHHHHHTT-TCEEEEEECTTSCGGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCT-TCEEEEE
T ss_pred HHHHHHHHHHHc-CCeEEEEeCCCCcHHHHHHHhhcCCcCEEEEeeeccCCCCcccchHHHHHHHHHHHhcc-CCeEEEE
Confidence 4567 77664 444443332 2345677777776 99997653 22221 1234456677777776653 7899999
Q ss_pred cCCCCHHHHHHHHHcCCCEEEEchHHHHhcccCCHHHHHHHHHHHHHHHH
Q 021739 227 GGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFE 276 (308)
Q Consensus 227 GGI~~~~d~~k~l~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~l~ 276 (308)
|||. .+.+.++.++|||.+.+||.++.+ ..+ .+.++.+++.++
T Consensus 180 GGI~-~~ti~~~~~aGAd~~V~GsaIf~~---~d~---~~~i~~l~~~~~ 222 (227)
T 1tqx_A 180 GGLN-IETTEISASHGANIIVAGTSIFNA---EDP---KYVIDTMRVSVQ 222 (227)
T ss_dssp SSCC-HHHHHHHHHHTCCEEEESHHHHTC---SSH---HHHHHHHHHHHH
T ss_pred CCCC-HHHHHHHHHcCCCEEEEeHHHhCC---CCH---HHHHHHHHHHHH
Confidence 9998 789999999999999999998753 223 344555554443
No 188
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.23 E-value=0.0014 Score=57.55 Aligned_cols=75 Identities=17% Similarity=0.193 Sum_probs=59.1
Q ss_pred HHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 021739 177 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 177 e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
+.|+...+.|+|.+++-.-.+. ..+.....+.+.++.+.. .+|+...|||++.+|+.++|.+|||-|.+++..+.
T Consensus 35 ~~a~~~~~~gad~lhvvDld~a-~~~~~~~~~~i~~i~~~~--~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~~ 109 (243)
T 4gj1_A 35 KKFKEYEKAGAKELHLVDLTGA-KDPSKRQFALIEKLAKEV--SVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIK 109 (243)
T ss_dssp HHHHHHHHHTCCEEEEEEHHHH-HCGGGCCHHHHHHHHHHC--CSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTTT
T ss_pred HHHHHHHHCCCCEEEEEecCcc-cccchhHHHHHHHHHHhc--CCCeEeccccccHHHHHHHHHcCCCEEEEcccccc
Confidence 5688889999999987542111 012334567788887766 79999999999999999999999999999997654
No 189
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=97.22 E-value=0.0018 Score=60.20 Aligned_cols=89 Identities=19% Similarity=0.240 Sum_probs=67.2
Q ss_pred HHHHHHHHHhcCCCEEEEecC-CHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCH
Q 021739 154 WKDVKWLQTITSLPILVKGVL-TAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRG 232 (308)
Q Consensus 154 ~~~i~~ir~~~~~Pv~vK~~~-~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~ 232 (308)
.+.++++++..++|+.+.... +.+.++.+.++|+|.|++....+. .....+.+.++++.+ ++||++ |.+.+.
T Consensus 84 ~~~I~~vk~~~~~pvga~ig~~~~e~a~~l~eaGad~I~ld~a~G~----~~~~~~~i~~i~~~~--~~~Viv-g~v~t~ 156 (361)
T 3khj_A 84 VNEVLKVKNSGGLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAHGH----SLNIIRTLKEIKSKM--NIDVIV-GNVVTE 156 (361)
T ss_dssp HHHHHHHHHTTCCCCEEEECTTCHHHHHHHHHTTCSEEEECCSCCS----BHHHHHHHHHHHHHC--CCEEEE-EEECSH
T ss_pred HHHHHHHHhccCceEEEEeCCCHHHHHHHHHHcCcCeEEEeCCCCC----cHHHHHHHHHHHHhc--CCcEEE-ccCCCH
Confidence 467888888778898887654 378899999999999987532221 011235566666665 688887 678999
Q ss_pred HHHHHHHHcCCCEEEEc
Q 021739 233 TDVFKALALGASGVFVG 249 (308)
Q Consensus 233 ~d~~k~l~~GAd~V~ig 249 (308)
+++.++..+|||+|.+|
T Consensus 157 e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 157 EATKELIENGADGIKVG 173 (361)
T ss_dssp HHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHcCcCEEEEe
Confidence 99999999999999986
No 190
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.21 E-value=0.0019 Score=55.59 Aligned_cols=83 Identities=20% Similarity=0.186 Sum_probs=62.5
Q ss_pred ccCHHHHHHHHHhcC-CCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCC------eE
Q 021739 151 SLNWKDVKWLQTITS-LPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRV------PV 223 (308)
Q Consensus 151 ~~~~~~i~~ir~~~~-~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~i------pv 223 (308)
+...+.|+++++.++ .-|....+.+.++++.+.++|+++|+. -+ .+.+.+..+++. ++ |+
T Consensus 49 ~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivs-P~---------~~~evi~~~~~~---~v~~~~~~~~ 115 (217)
T 3lab_A 49 EAGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVS-PG---------LTPELIEKAKQV---KLDGQWQGVF 115 (217)
T ss_dssp TTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEE-SS---------CCHHHHHHHHHH---HHHCSCCCEE
T ss_pred ccHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEe-CC---------CcHHHHHHHHHc---CCCccCCCeE
Confidence 334688999999874 445566678999999999999999963 21 123444444332 46 88
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEE
Q 021739 224 FLDGGVRRGTDVFKALALGASGVFV 248 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~GAd~V~i 248 (308)
+. |+.|+.++.+++++|+|.+-+
T Consensus 116 ~P--G~~TptE~~~A~~~Gad~vK~ 138 (217)
T 3lab_A 116 LP--GVATASEVMIAAQAGITQLKC 138 (217)
T ss_dssp EE--EECSHHHHHHHHHTTCCEEEE
T ss_pred eC--CCCCHHHHHHHHHcCCCEEEE
Confidence 88 889999999999999999975
No 191
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=97.20 E-value=0.013 Score=52.86 Aligned_cols=179 Identities=11% Similarity=0.026 Sum_probs=109.2
Q ss_pred HHHHHHHHHHcCCceeecCCC-------------CCCHHHHh-------ccCCCCceEEe---eecCCchHHHHHHHHHH
Q 021739 30 ECATARAASAAGTIMTLSSWA-------------TSSVEEVS-------STGPGIRFFQL---YVTKHRNVDAQLVKRAE 86 (308)
Q Consensus 30 ~~~~a~~a~~~g~~~~~s~~~-------------~~~~e~i~-------~~~~~~~~~Ql---~~~~d~~~~~~~~~~~~ 86 (308)
|...++.+.+.|......+-+ ..+++++. ...+.|....+ | +.+++...+.++++.
T Consensus 26 D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gy-g~~~~~~~~~v~~l~ 104 (295)
T 1xg4_A 26 NANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGF-GSSAFNVARTVKSMI 104 (295)
T ss_dssp SHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCS-SSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCccc-CCCHHHHHHHHHHHH
Confidence 557899999999876554321 12455433 22334677777 4 447788888888888
Q ss_pred HcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhc-C
Q 021739 87 RAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTIT-S 165 (308)
Q Consensus 87 ~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~-~ 165 (308)
++|+.++.|.-.+. |++. ++..+ . .+. ..+...+.|+.+++.- +
T Consensus 105 ~aGa~gv~iEd~~~---------------~k~c---------------gH~~g-k-~L~---p~~~~~~~I~Aa~~a~~~ 149 (295)
T 1xg4_A 105 KAGAAGLHIEDQVG---------------AKRS---------------GHRPN-K-AIV---SKEEMVDRIRAAVDAKTD 149 (295)
T ss_dssp HHTCSEEEEECBCS---------------SCCC---------------TTSSS-C-CBC---CHHHHHHHHHHHHHHCSS
T ss_pred HcCCeEEEECCCCC---------------Cccc---------------CCCCC-C-ccC---CHHHHHHHHHHHHHhccC
Confidence 99999988874331 1111 00000 0 010 1111234566666553 4
Q ss_pred CCEEEEecCC----------HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCC--CCH-
Q 021739 166 LPILVKGVLT----------AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV--RRG- 232 (308)
Q Consensus 166 ~Pv~vK~~~~----------~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI--~~~- 232 (308)
.++.+..+.. .+.++.+.++|||.|.+.+ .++.+.+.++.+.+ ++|++++.-. .++
T Consensus 150 ~~~~i~aRtda~~~~gl~~ai~ra~ay~eAGAd~i~~e~---------~~~~~~~~~i~~~~--~iP~~~N~~~~g~~p~ 218 (295)
T 1xg4_A 150 PDFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFPEA---------ITELAMYRQFADAV--QVPILANITEFGATPL 218 (295)
T ss_dssp TTSEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEETT---------CCSHHHHHHHHHHH--CSCBEEECCSSSSSCC
T ss_pred CCcEEEEecHHhhhcCHHHHHHHHHHHHHcCCCEEEEeC---------CCCHHHHHHHHHHc--CCCEEEEecccCCCCC
Confidence 5666665422 2457888999999998743 34677788888887 6899875532 222
Q ss_pred HHHHHHHHcCCCEEEEchHHHHh
Q 021739 233 TDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 233 ~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
....+.-++|++.|.+|...+.+
T Consensus 219 ~~~~eL~~~G~~~v~~~~~~~~a 241 (295)
T 1xg4_A 219 FTTDELRSAHVAMALYPLSAFRA 241 (295)
T ss_dssp CCHHHHHHTTCSEEEESSHHHHH
T ss_pred CCHHHHHHcCCCEEEEChHHHHH
Confidence 23344446999999999988765
No 192
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=97.18 E-value=0.0018 Score=56.45 Aligned_cols=81 Identities=17% Similarity=0.207 Sum_probs=60.7
Q ss_pred CHHHHHHHHHhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCC
Q 021739 153 NWKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR 231 (308)
Q Consensus 153 ~~~~i~~ir~~~-~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~ 231 (308)
..+.|+++++.+ +.-+....+.+.++++.+.++|+|+|+..+ .+.+.+..+++ . .+|++. |+.|
T Consensus 72 a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvsP~----------~~~~vi~~~~~-~--gi~~ip--Gv~T 136 (232)
T 4e38_A 72 AVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVSPG----------FNPNTVRACQE-I--GIDIVP--GVNN 136 (232)
T ss_dssp HHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEECSS----------CCHHHHHHHHH-H--TCEEEC--EECS
T ss_pred HHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEeCC----------CCHHHHHHHHH-c--CCCEEc--CCCC
Confidence 457899999876 443555566899999999999999996311 12333433333 2 688888 6889
Q ss_pred HHHHHHHHHcCCCEEEE
Q 021739 232 GTDVFKALALGASGVFV 248 (308)
Q Consensus 232 ~~d~~k~l~~GAd~V~i 248 (308)
+.++.+++++|||.|.+
T Consensus 137 ptEi~~A~~~Gad~vK~ 153 (232)
T 4e38_A 137 PSTVEAALEMGLTTLKF 153 (232)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 99999999999999987
No 193
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=97.17 E-value=0.0031 Score=59.05 Aligned_cols=119 Identities=15% Similarity=0.092 Sum_probs=88.1
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
.+++.+.+.++++.+.|++.+.+++++ .+++.
T Consensus 163 ~~~e~~~~~a~~~~~~Gf~~vKik~g~------------------------------------------------~~~~~ 194 (388)
T 2nql_A 163 RTLKARGELAKYWQDRGFNAFKFATPV------------------------------------------------ADDGP 194 (388)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEGGG------------------------------------------------CTTCH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEeCCC------------------------------------------------CChHH
Confidence 467777777788888999999887532 02344
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEE
Q 021739 153 NWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 224 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvi 224 (308)
.+.++.+|+.+ +++|.+... .+.++ ++.+.+.|+++|. +. ..+..++.+.++++.+ ++||+
T Consensus 195 -~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPI~ 263 (388)
T 2nql_A 195 -AAEIANLRQVLGPQAKIAADMHWNQTPERALELIAEMQPFDPWFAE-------AP-VWTEDIAGLEKVSKNT--DVPIA 263 (388)
T ss_dssp -HHHHHHHHHHHCTTSEEEEECCSCSCHHHHHHHHHHHGGGCCSCEE-------CC-SCTTCHHHHHHHHTSC--CSCEE
T ss_pred -HHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEE-------CC-CChhhHHHHHHHHhhC--CCCEE
Confidence 57889999876 689998854 45544 5667788999874 10 1123567777776655 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 225 LDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 225 a~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
+++.+.+..++.++++.| +|.|++-.
T Consensus 264 ~dE~~~~~~~~~~~i~~~~~d~v~ik~ 290 (388)
T 2nql_A 264 VGEEWRTHWDMRARIERCRIAIVQPEM 290 (388)
T ss_dssp ECTTCCSHHHHHHHHTTSCCSEECCCH
T ss_pred EeCCcCCHHHHHHHHHcCCCCEEEecC
Confidence 999999999999999987 89999854
No 194
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=97.15 E-value=0.011 Score=55.57 Aligned_cols=124 Identities=11% Similarity=0.029 Sum_probs=91.2
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccc-
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDR- 150 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~- 150 (308)
..+++.+.+.++++.+.|++.+-++. ||+. . +.
T Consensus 143 ~~~~~~~~~~a~~~~~~Gf~~iKik~-spvG-----------------------------------~----------~~~ 176 (401)
T 2hzg_A 143 GDTPQETLERARAARRDGFAAVKFGW-GPIG-----------------------------------R----------GTV 176 (401)
T ss_dssp CSSHHHHHHHHHHHHHTTCSEEEEES-TTTT-----------------------------------S----------SCH
T ss_pred CCCHHHHHHHHHHHHHhCCCeEEEcC-CCCC-----------------------------------C----------CHH
Confidence 35778788888888889999998874 4421 0 11
Q ss_pred ccCHHHHHHHHHhc--CCCEEEEec--C--CHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHH-HccC
Q 021739 151 SLNWKDVKWLQTIT--SLPILVKGV--L--TAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQ-AAKG 219 (308)
Q Consensus 151 ~~~~~~i~~ir~~~--~~Pv~vK~~--~--~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~-~~~~ 219 (308)
+...+.++.+|+.+ +++|.++.. . +.++ ++.+.+.|+++|.= . ..+.+++.+.++++ .+
T Consensus 177 ~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~~~a~~~~~~l~~~~i~~iEq-------P-~~~~d~~~~~~l~~~~~-- 246 (401)
T 2hzg_A 177 AADADQIMAAREGLGPDGDLMVDVGQIFGEDVEAAAARLPTLDAAGVLWLEE-------P-FDAGALAAHAALAGRGA-- 246 (401)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEECTTTTTTCHHHHHTTHHHHHHTTCSEEEC-------C-SCTTCHHHHHHHHTTCC--
T ss_pred HHHHHHHHHHHHHhCCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCCCEEEC-------C-CCccCHHHHHHHHhhCC--
Confidence 22357889999876 689998854 5 6665 46788899998851 0 01235677777765 44
Q ss_pred CCeEEEecCCCCHHHHHHHHHcC-CCEEEEchH
Q 021739 220 RVPVFLDGGVRRGTDVFKALALG-ASGVFVGRP 251 (308)
Q Consensus 220 ~ipvia~GGI~~~~d~~k~l~~G-Ad~V~ig~~ 251 (308)
++||++++.+.+..++.++++.| +|.|++-..
T Consensus 247 ~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 279 (401)
T 2hzg_A 247 RVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCG 279 (401)
T ss_dssp SSEEEECTTCSSHHHHHHHHHHSCCSEEEECHH
T ss_pred CCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcc
Confidence 79999999999999999999977 899999643
No 195
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=97.15 E-value=0.0029 Score=54.82 Aligned_cols=38 Identities=32% Similarity=0.459 Sum_probs=35.0
Q ss_pred cCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHh
Q 021739 218 KGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 218 ~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
..+++++..|||.+..|+..+...|+|++.+|++++.+
T Consensus 171 ~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l~a 208 (226)
T 1w0m_A 171 FPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKA 208 (226)
T ss_dssp CTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTC
T ss_pred cCCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHHCC
Confidence 35799999999999999999999999999999999975
No 196
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=97.14 E-value=0.0088 Score=55.70 Aligned_cols=127 Identities=12% Similarity=0.106 Sum_probs=92.0
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
.+++.+.+.++++.+.|++.+-++++++..+ . . .+++.
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~----------~------------------------------~--~~~~~ 185 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPPVS----------W------------------------------A--PDVKM 185 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTTST----------T------------------------------C--CCHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCccc----------c------------------------------c--cchHH
Confidence 4677777777878888999999988764210 0 0 02233
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEE
Q 021739 153 NWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 224 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvi 224 (308)
..+.++.+|+.+ +++|.+... .+.++ ++.+.+.|+++|.= . . .+..++.+.++++.+ ++||+
T Consensus 186 ~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~---P---~--~~~~~~~~~~l~~~~--~iPIa 255 (382)
T 1rvk_A 186 DLKACAAVREAVGPDIRLMIDAFHWYSRTDALALGRGLEKLGFDWIEE---P---M--DEQSLSSYKWLSDNL--DIPVV 255 (382)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECCTTCCHHHHHHHHHHHHTTTCSEEEC---C---S--CTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEeC---C---C--ChhhHHHHHHHHhhC--CCCEE
Confidence 457899999876 688998854 45544 56677889998851 0 0 123577778887766 79999
Q ss_pred EecCCCC-HHHHHHHHHcC-CCEEEEchH
Q 021739 225 LDGGVRR-GTDVFKALALG-ASGVFVGRP 251 (308)
Q Consensus 225 a~GGI~~-~~d~~k~l~~G-Ad~V~ig~~ 251 (308)
+++.+.+ ..|+.++++.| +|.|++--.
T Consensus 256 ~dE~~~~~~~~~~~~i~~~~~d~v~ik~~ 284 (382)
T 1rvk_A 256 GPESAAGKHWHRAEWIKAGACDILRTGVN 284 (382)
T ss_dssp ECSSCSSHHHHHHHHHHTTCCSEEEECHH
T ss_pred EeCCccCcHHHHHHHHHcCCCCEEeeCch
Confidence 9999999 99999999987 899998643
No 197
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=97.13 E-value=0.0017 Score=58.29 Aligned_cols=86 Identities=19% Similarity=0.168 Sum_probs=64.5
Q ss_pred HHHHHHHHhcC-CCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHcc---CCCeEEEecCCC
Q 021739 155 KDVKWLQTITS-LPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAK---GRVPVFLDGGVR 230 (308)
Q Consensus 155 ~~i~~ir~~~~-~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~---~~ipvia~GGI~ 230 (308)
+.+++.|+..+ .||.+ .+-+.++++.+.++|+|.|.+.|. +.+.+.++.+.+. .++++.++|||.
T Consensus 183 ~av~~ar~~~~~~~I~V-ev~t~eea~eal~aGaD~I~LDn~----------~~~~~~~~v~~l~~~~~~v~ieaSGGIt 251 (284)
T 1qpo_A 183 DALRAVRNAAPDLPCEV-EVDSLEQLDAVLPEKPELILLDNF----------AVWQTQTAVQRRDSRAPTVMLESSGGLS 251 (284)
T ss_dssp HHHHHHHHHCTTSCEEE-EESSHHHHHHHGGGCCSEEEEETC----------CHHHHHHHHHHHHHHCTTCEEEEESSCC
T ss_pred HHHHHHHHhCCCCCEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhhccCCCeEEEEECCCC
Confidence 45777777652 36665 566889999999999999998773 2233334333332 379999999995
Q ss_pred CHHHHHHHHHcCCCEEEEchHH
Q 021739 231 RGTDVFKALALGASGVFVGRPV 252 (308)
Q Consensus 231 ~~~d~~k~l~~GAd~V~ig~~~ 252 (308)
.+++.+..+.|+|.+.+|+..
T Consensus 252 -~~~i~~~a~tGVD~isvG~l~ 272 (284)
T 1qpo_A 252 -LQTAATYAETGVDYLAVGALT 272 (284)
T ss_dssp -TTTHHHHHHTTCSEEECGGGT
T ss_pred -HHHHHHHHhcCCCEEEECHHH
Confidence 899999999999999999854
No 198
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=97.04 E-value=0.0063 Score=56.68 Aligned_cols=116 Identities=13% Similarity=0.084 Sum_probs=86.1
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
.+++.+.+.++++.+.|++.+.+++++ ++..
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iKik~g~-------------------------------------------------~~~~ 174 (379)
T 2rdx_A 144 RSEAETRAELARHRAAGYRQFQIKVGA-------------------------------------------------DWQS 174 (379)
T ss_dssp SCSHHHHHHHHHHHHTTCCEEEEECCS-------------------------------------------------CHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccC-------------------------------------------------CHHH
Confidence 467888888888888999999887643 1122
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEE
Q 021739 153 NWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 224 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvi 224 (308)
..+.++.+|+.+ ++||.++.. .+.++ ++.+.+.|+ +|. +. .+ .++.+.++++.+ ++||+
T Consensus 175 ~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i-~iE-------~P--~~-~~~~~~~l~~~~--~iPI~ 241 (379)
T 2rdx_A 175 DIDRIRACLPLLEPGEKAMADANQGWRVDNAIRLARATRDLDY-ILE-------QP--CR-SYEECQQVRRVA--DQPMK 241 (379)
T ss_dssp HHHHHHHHGGGSCTTCEEEEECTTCSCHHHHHHHHHHTTTSCC-EEE-------CC--SS-SHHHHHHHHTTC--CSCEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhCCe-EEe-------CC--cC-CHHHHHHHHhhC--CCCEE
Confidence 347789999887 588988854 45555 455566787 663 11 12 677777776655 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 225 LDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 225 a~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
+++.+.+..|+.++++.| +|.|++-.
T Consensus 242 ~de~i~~~~~~~~~i~~~~~d~v~ik~ 268 (379)
T 2rdx_A 242 LDECVTGLHMAQRIVADRGAEICCLKI 268 (379)
T ss_dssp ECTTCCSHHHHHHHHHHTCCSEEEEET
T ss_pred EeCCcCCHHHHHHHHHcCCCCEEEEec
Confidence 999999999999999987 89999954
No 199
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.04 E-value=0.055 Score=51.96 Aligned_cols=68 Identities=16% Similarity=0.206 Sum_probs=54.4
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 249 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig 249 (308)
.+.+.++.++|+|.|.+...++. ....++.+.++++.. ..+|++ .|++.+.+++.+++.+|||+|.+|
T Consensus 235 ~~~a~~l~~~G~d~ivi~~a~g~----~~~~~~~i~~l~~~~-p~~pvi-~G~v~t~~~a~~~~~~Gad~I~vg 302 (491)
T 1zfj_A 235 FERAEALFEAGADAIVIDTAHGH----SAGVLRKIAEIRAHF-PNRTLI-AGNIATAEGARALYDAGVDVVKVG 302 (491)
T ss_dssp HHHHHHHHHHTCSEEEECCSCTT----CHHHHHHHHHHHHHC-SSSCEE-EEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCeEEEeeecCc----chhHHHHHHHHHHHC-CCCcEe-CCCccCHHHHHHHHHcCCCEEEEC
Confidence 57899999999999998764331 123456677777665 368998 899999999999999999999888
No 200
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=97.03 E-value=0.0041 Score=56.90 Aligned_cols=104 Identities=19% Similarity=0.233 Sum_probs=58.8
Q ss_pred HHHH--HHcCCcEEEEecccccC----CC---CCcchH---HHHHHHHHHccCCCeEE-EecCCCCHHHHHH----HHHc
Q 021739 179 ASLA--IQYGAAGIIVSNHGARQ----LD---YVPATV---MALEEVVQAAKGRVPVF-LDGGVRRGTDVFK----ALAL 241 (308)
Q Consensus 179 a~~~--~~~G~d~i~v~~~gg~~----~~---~~~~~~---~~l~~i~~~~~~~ipvi-a~GGI~~~~d~~k----~l~~ 241 (308)
++.+ .+.|+|.+.+--.+... +. ...... +.+.++.+.. .+|+| .+||. +.++..+ ++.+
T Consensus 194 ~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~--~~P~v~lsgG~-~~~~fl~~v~~A~~a 270 (332)
T 3iv3_A 194 MKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEAST--DLPYIYLSAGV-SAELFQETLVFAHKA 270 (332)
T ss_dssp HHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTC--SSCEEEECTTC-CHHHHHHHHHHHHHH
T ss_pred HHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcC--CCCEEEECCCC-CHHHHHHHHHHHHHc
Confidence 4555 57799999985322110 10 011112 2345554443 79965 79998 4566654 4458
Q ss_pred CC--CEEEEchHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHcCCCCHhhhcc
Q 021739 242 GA--SGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITR 292 (308)
Q Consensus 242 GA--d~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~l~~~m~~~G~~~i~~l~~ 292 (308)
|| ++|.+||.+... ++.-+.+.=.+..+.+|+..|..+|++|+.
T Consensus 271 Ga~f~Gv~~GRnvwq~-------~v~~~~~~~~~~~~~~l~~~g~~~i~~l~~ 316 (332)
T 3iv3_A 271 GAKFNGVLCGRATWAG-------SVQVYMEEGKEAARQWLRTSGLQNINELNK 316 (332)
T ss_dssp TCCCCEEEECHHHHTT-------HHHHHHHHCHHHHHHHHTTHHHHHHHHHHH
T ss_pred CCCcceEEeeHHHHHh-------hhhhhccccHHHHHHHHHHHhHHHHHHHHH
Confidence 99 999999987653 122222222345556666666666666644
No 201
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=97.01 E-value=0.013 Score=54.21 Aligned_cols=120 Identities=8% Similarity=0.031 Sum_probs=87.6
Q ss_pred CCchHHHHHHHHHHH-cCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 73 KHRNVDAQLVKRAER-AGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~-~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
.+++.+.+.++++.+ .|++.+-++++++ +++
T Consensus 141 ~~~e~~~~~a~~~~~~~Gf~~iKik~g~~------------------------------------------------~~~ 172 (370)
T 1nu5_A 141 GDTARDIDSALEMIETRRHNRFKVKLGAR------------------------------------------------TPA 172 (370)
T ss_dssp SCHHHHHHHHHHHHHTTSCSEEEEECSSS------------------------------------------------CHH
T ss_pred CCHHHHHHHHHHHHHhCCccEEEEecCCC------------------------------------------------ChH
Confidence 467777777777777 9999998876532 011
Q ss_pred cCHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeE
Q 021739 152 LNWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 152 ~~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipv 223 (308)
...+.++.+|+.+ ++++.+... .+.++ ++.+.+.|+++|. +. ..+..++.+.++++.+ ++||
T Consensus 173 ~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~~~~~~~~l~~~~--~ipI 242 (370)
T 1nu5_A 173 QDLEHIRSIVKAVGDRASVRVDVNQGWDEQTASIWIPRLEEAGVELVE-------QP-VPRANFGALRRLTEQN--GVAI 242 (370)
T ss_dssp HHHHHHHHHHHHHGGGCEEEEECTTCCCHHHHHHHHHHHHHHTCCEEE-------CC-SCTTCHHHHHHHHHHC--SSEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCcceEe-------CC-CCcccHHHHHHHHHhC--CCCE
Confidence 2246788888875 578888754 45544 5677888999885 11 1123577778887766 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 224 FLDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
++++.+.+..|+.+++..| +|.|++--
T Consensus 243 a~dE~~~~~~~~~~~i~~~~~d~v~ik~ 270 (370)
T 1nu5_A 243 LADESLSSLSSAFELARDHAVDAFSLKL 270 (370)
T ss_dssp EESTTCCSHHHHHHHHHTTCCSEEEECH
T ss_pred EeCCCCCCHHHHHHHHHhCCCCEEEEch
Confidence 9999999999999999987 89999864
No 202
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=96.98 E-value=0.0082 Score=56.19 Aligned_cols=119 Identities=11% Similarity=0.032 Sum_probs=87.5
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
.+++.+.+.++++.+.||+.+-+.++.. .++.
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~------------------------------------------------~~~~ 179 (391)
T 2qgy_A 148 KDTNDYLRQIEKFYGKKYGGIKIYPMLD------------------------------------------------SLSI 179 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEECCCCS------------------------------------------------SHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCCC------------------------------------------------hHHH
Confidence 4677777778888888999987764210 0122
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEE
Q 021739 153 NWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 224 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvi 224 (308)
..+.++++|+.+ ++||.+... .+.++ ++.+.+.|+++|.= . . .+..++.+.++++.+ ++||+
T Consensus 180 ~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq---P---~--~~~d~~~~~~l~~~~--~iPIa 249 (391)
T 2qgy_A 180 SIQFVEKVREIVGDELPLMLDLAVPEDLDQTKSFLKEVSSFNPYWIEE---P---V--DGENISLLTEIKNTF--NMKVV 249 (391)
T ss_dssp HHHHHHHHHHHHCSSSCEEEECCCCSCHHHHHHHHHHHGGGCCSEEEC---S---S--CTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCCCCCHHHHHHHHHHHHhcCCCeEeC---C---C--ChhhHHHHHHHHhhC--CCCEE
Confidence 357889999876 689998854 45554 56677889998851 0 0 123577778887766 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEc
Q 021739 225 LDGGVRRGTDVFKALALG-ASGVFVG 249 (308)
Q Consensus 225 a~GGI~~~~d~~k~l~~G-Ad~V~ig 249 (308)
+++.+.+..++.++++.| +|.|++-
T Consensus 250 ~dE~~~~~~~~~~~i~~~~~d~v~ik 275 (391)
T 2qgy_A 250 TGEKQSGLVHFRELISRNAADIFNPD 275 (391)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCB
T ss_pred EcCCcCCHHHHHHHHHcCCCCEEEEC
Confidence 999999999999999987 8999884
No 203
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=96.96 E-value=0.002 Score=55.57 Aligned_cols=97 Identities=22% Similarity=0.258 Sum_probs=59.0
Q ss_pred HHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEeccc--ccC---CCCCcchHHHHHHHHHHccCCCeEEEecCCCC
Q 021739 157 VKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHG--ARQ---LDYVPATVMALEEVVQAAKGRVPVFLDGGVRR 231 (308)
Q Consensus 157 i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~g--g~~---~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~ 231 (308)
++..++. ++.+++= +.+.++..++.+.|.+.|-+.+.. |+. ....+...+...+..+....++|+++.|||++
T Consensus 104 ~~~a~~~-Gl~~iv~-v~~~~e~~~~~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~ 181 (219)
T 2h6r_A 104 INKCKNL-GLETIVC-TNNINTSKAVAALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGISK 181 (219)
T ss_dssp HHHHHHH-TCEEEEE-ESSSHHHHHHTTTCCSEEEECCCC--------------CSHHHHHHHHHHCTTCEEEECSSCCS
T ss_pred HHHHHHC-CCeEEEE-eCCchHHHHHHhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcCc
Confidence 4444433 5544332 234455677778888888765432 121 11111112222222233334799999999999
Q ss_pred HHHHHHHHHcCCCEEEEchHHHHh
Q 021739 232 GTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 232 ~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
++++..+...|||+|.+|++++..
T Consensus 182 ~~~~~~~~~~gaDgvlVGsAi~~~ 205 (219)
T 2h6r_A 182 GEDVKAALDLGAEGVLLASGVVKA 205 (219)
T ss_dssp HHHHHHHHTTTCCCEEESHHHHTC
T ss_pred HHHHHHHhhCCCCEEEEcHHHhCc
Confidence 999999989999999999999974
No 204
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=96.96 E-value=0.0015 Score=56.30 Aligned_cols=86 Identities=20% Similarity=0.166 Sum_probs=59.0
Q ss_pred HHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCC-HHHHHHHHHcCCCEEEEchHHHHh
Q 021739 177 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR-GTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 177 e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~-~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
+.++.+.++|+|+++++.+ ..+.+..+++.++ + .++.++||+- +.+..+++..|||.+.+||+++.+
T Consensus 119 ~~a~~a~~~G~~GvV~sat----------~~~e~~~ir~~~~-~-f~~v~pGI~~~g~~~~~a~~~Gad~iVvGr~I~~a 186 (215)
T 3ve9_A 119 YLREVARRVNPKGFVAPAT----------RPSMISRVKGDFP-D-KLVISPGVGTQGAKPGIALCHGADYEIVGRSVYQS 186 (215)
T ss_dssp HHHHHHHHHCCSEEECCTT----------SHHHHHHHHHHCT-T-SEEEECCTTSTTCCTTHHHHTTCSEEEECHHHHTS
T ss_pred HHHHHHHHcCCCceeeCCC----------CHHHHHHHHHhCC-C-cEEEcCCCCcCcCCHHHHHHcCCCEEEeCHHHcCC
Confidence 4577788899999986532 2445666666654 4 6888999983 226778889999999999999875
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHH
Q 021739 256 LAVDGEAGVRKVLQMLRDEFELTMA 280 (308)
Q Consensus 256 ~~~~G~~~v~~~i~~l~~~l~~~m~ 280 (308)
..+ .+.++.++++++....
T Consensus 187 ---~dp---~~a~~~i~~~i~~~~~ 205 (215)
T 3ve9_A 187 ---ADP---VRKLEEIVRSQEEVLS 205 (215)
T ss_dssp ---SSH---HHHHHHHHHHHHHHC-
T ss_pred ---CCH---HHHHHHHHHHHHHHHH
Confidence 233 2344566666655443
No 205
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=96.95 E-value=0.0088 Score=56.01 Aligned_cols=119 Identities=12% Similarity=0.068 Sum_probs=87.0
Q ss_pred CchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccC
Q 021739 74 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 153 (308)
Q Consensus 74 d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 153 (308)
+++.+.+.++++.+.||+.+-+.++.+ +....
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~~------------------------------------------------~~~~~ 193 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQP------------------------------------------------DGALD 193 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCCS------------------------------------------------CHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCC------------------------------------------------CHHHH
Confidence 677777777778888999988765311 12223
Q ss_pred HHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEE
Q 021739 154 WKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 225 (308)
Q Consensus 154 ~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia 225 (308)
.+.++.+|+.+ +++|.+... .+.++ ++.+.+.|+++|.= . . .+..++.+.++++.+ ++||++
T Consensus 194 ~e~v~avR~avg~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~---P---~--~~~~~~~~~~l~~~~--~iPIa~ 263 (393)
T 2og9_A 194 IARVTAVRKHLGDAVPLMVDANQQWDRPTAQRMCRIFEPFNLVWIEE---P---L--DAYDHEGHAALALQF--DTPIAT 263 (393)
T ss_dssp HHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCCSCEEC---C---S--CTTCHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCEEEC---C---C--CcccHHHHHHHHHhC--CCCEEe
Confidence 57789999875 689988754 45554 45667789988751 0 0 123567777887766 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 226 DGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
++.+.+..++.++++.| +|.|++--
T Consensus 264 dE~~~~~~~~~~~i~~~~~d~v~ik~ 289 (393)
T 2og9_A 264 GEMLTSAAEHGDLIRHRAADYLMPDA 289 (393)
T ss_dssp CTTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred CCCcCCHHHHHHHHHCCCCCEEeeCc
Confidence 99999999999999987 89998854
No 206
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=96.84 E-value=0.012 Score=55.18 Aligned_cols=120 Identities=12% Similarity=0.047 Sum_probs=88.5
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
..+++.+.+.++++.+.|++.+-+.+++. ++
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~iKiKvG~~-------------------------------------------------~~ 179 (389)
T 3ozy_A 149 DLTPDQAADELAGWVEQGFTAAKLKVGRA-------------------------------------------------PR 179 (389)
T ss_dssp SCCHHHHHHHHHHHHHTTCSEEEEECCSC-------------------------------------------------HH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEeeccCCC-------------------------------------------------HH
Confidence 35678888888888889999998876531 11
Q ss_pred cCHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHH-HHccCCCe
Q 021739 152 LNWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVV-QAAKGRVP 222 (308)
Q Consensus 152 ~~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~-~~~~~~ip 222 (308)
...+.++++|+.+ +++|.+... .+.++ ++.+.+.|+++|. +. ..+.+++.+.+++ +.+ ++|
T Consensus 180 ~d~~~v~avR~a~g~d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~--~iP 249 (389)
T 3ozy_A 180 KDAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEAGCYWFE-------EP-LSIDDIEGHRILRAQGT--PVR 249 (389)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSEEE-------SC-SCTTCHHHHHHHHTTCC--SSE
T ss_pred HHHHHHHHHHHHcCCCceEEEECCCCcCHHHHHHHHHHHHhcCCCEEE-------CC-CCcccHHHHHHHHhcCC--CCC
Confidence 2346788999886 688988854 45554 5677889999985 10 0122566777776 554 799
Q ss_pred EEEecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 223 VFLDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 223 via~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
|++++.+.+..|+.++++.| +|.|++--
T Consensus 250 Ia~dE~i~~~~~~~~~i~~~~~d~v~ik~ 278 (389)
T 3ozy_A 250 IATGENLYTRNAFNDYIRNDAIDVLQADA 278 (389)
T ss_dssp EEECTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred EEeCCCCCCHHHHHHHHHcCCCCEEEeCc
Confidence 99999999999999999987 89998854
No 207
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=96.84 E-value=0.0043 Score=53.98 Aligned_cols=63 Identities=16% Similarity=0.214 Sum_probs=48.5
Q ss_pred cCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHh
Q 021739 185 YGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 185 ~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
.|..+|.+-. .|.. ...+.+.++++.+ .++|++..|||++++++.++.. |||+|.+|+++...
T Consensus 158 ~g~~~vY~e~-sG~~-----g~~~~v~~ir~~~-~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~~ 220 (235)
T 3w01_A 158 YRLPVMYIEY-SGIY-----GDVSKVQAVSEHL-TETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYKD 220 (235)
T ss_dssp TCCSEEEEEC-TTSC-----CCHHHHHHHHTTC-SSSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHHC
T ss_pred cCCCEEEEec-CCCc-----CCHHHHHHHHHhc-CCCCEEEECCcCCHHHHHHHHc-CCCEEEECCceecC
Confidence 3778887755 3321 2467777776543 2689999999999999998776 99999999999863
No 208
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=96.82 E-value=0.025 Score=52.22 Aligned_cols=120 Identities=13% Similarity=0.163 Sum_probs=87.0
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
.+++.+.+.++++.+.|++.+-+.++++ +++.
T Consensus 139 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~------------------------------------------------~~~~ 170 (366)
T 1tkk_A 139 NSPEEMAADAENYLKQGFQTLKIKVGKD------------------------------------------------DIAT 170 (366)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSS------------------------------------------------CHHH
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEeCCC------------------------------------------------CHHH
Confidence 4677777777777788999998876531 1122
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHH--cCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCe
Q 021739 153 NWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQ--YGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVP 222 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~--~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 222 (308)
..+.++.+|+.+ ++++.+... .+.++ ++.+.+ .|+++|. +. ..+.+++.+.++++.+ ++|
T Consensus 171 d~~~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~ip 240 (366)
T 1tkk_A 171 DIARIQEIRKRVGSAVKLRLDANQGWRPKEAVTAIRKMEDAGLGIELVE-------QP-VHKDDLAGLKKVTDAT--DTP 240 (366)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHTTCCEEEEE-------CC-SCTTCHHHHHHHHHHC--SSC
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHhhcCCCceEEE-------CC-CCcccHHHHHHHHhhC--CCC
Confidence 346788888876 688888754 45544 466777 7877774 11 1123577778887766 799
Q ss_pred EEEecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 223 VFLDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 223 via~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
|++++.+.+..|+.+++..| +|.|++--
T Consensus 241 Ia~dE~~~~~~~~~~~i~~~~~d~v~ik~ 269 (366)
T 1tkk_A 241 IMADESVFTPRQAFEVLQTRSADLINIKL 269 (366)
T ss_dssp EEECTTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred EEEcCCCCCHHHHHHHHHhCCCCEEEeeh
Confidence 99999999999999999977 89999864
No 209
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=96.81 E-value=0.015 Score=51.92 Aligned_cols=122 Identities=17% Similarity=0.241 Sum_probs=78.0
Q ss_pred chHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCH
Q 021739 75 RNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNW 154 (308)
Q Consensus 75 ~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 154 (308)
.+.+.+-++.+.++|++++++++-.| |.....
T Consensus 110 ~~~M~~dI~~~~~~GAdGvVfG~L~~------------------------------------------------dg~iD~ 141 (287)
T 3iwp_A 110 IEVMKADIRLAKLYGADGLVFGALTE------------------------------------------------DGHIDK 141 (287)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCBCT------------------------------------------------TSCBCH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeeCC------------------------------------------------CCCcCH
Confidence 45666777788899999998874212 111223
Q ss_pred HHHHHHHHhc-CCCEEEEec----CCH-HHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecC
Q 021739 155 KDVKWLQTIT-SLPILVKGV----LTA-EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGG 228 (308)
Q Consensus 155 ~~i~~ir~~~-~~Pv~vK~~----~~~-e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GG 228 (308)
+..+++.+.. .+++.+--. .++ +..+.+.+.|+|.|-.++... ........|.++.+...++++|++.||
T Consensus 142 ~~~~~Li~~a~~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~~~----~a~~Gl~~Lk~Lv~~a~~rI~ImaGGG 217 (287)
T 3iwp_A 142 ELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCDS----SALEGLPLIKRLIEQAKGRIVVMPGGG 217 (287)
T ss_dssp HHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTTSS----STTTTHHHHHHHHHHHTTSSEEEECTT
T ss_pred HHHHHHHHHcCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCC----ChHHhHHHHHHHHHHhCCCCEEEECCC
Confidence 3444444332 466665533 234 346788889999997755311 123345666666665556799999999
Q ss_pred CCCHHHHHHHHH-cCCCEEEEc
Q 021739 229 VRRGTDVFKALA-LGASGVFVG 249 (308)
Q Consensus 229 I~~~~d~~k~l~-~GAd~V~ig 249 (308)
|+ .+++.+.++ +|++.+=..
T Consensus 218 V~-~~Ni~~l~~~tG~~~~H~S 238 (287)
T 3iwp_A 218 IT-DRNLQRILEGSGATEFHCS 238 (287)
T ss_dssp CC-TTTHHHHHHHHCCSEEEEC
T ss_pred cC-HHHHHHHHHhhCCCEEeEC
Confidence 97 677777776 899877654
No 210
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=96.80 E-value=0.0036 Score=54.12 Aligned_cols=88 Identities=13% Similarity=0.140 Sum_probs=59.9
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCH-HHHHHHHHcCCCEEEEchHHHH
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRG-TDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~-~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
...++.+.++|+|+++++.+ ..+.+..+++.++ + .++.+.||+-. .+..+++..|+|.+.+|||+..
T Consensus 125 ~~~a~~a~~~g~~GvV~sat----------~p~e~~~ir~~~~-~-~~~vtPGI~~~g~tp~~a~~~Gad~iVVGR~I~~ 192 (222)
T 4dbe_A 125 DYIKNVIREISPKGIVVGGT----------KLDHITQYRRDFE-K-MTIVSPGMGSQGGSYGDAVCAGADYEIIGRSIYN 192 (222)
T ss_dssp HHHHHHHHHHCCSEEEECTT----------CHHHHHHHHHHCT-T-CEEEECCBSTTSBCTTHHHHHTCSEEEECHHHHT
T ss_pred HHHHHHHHHhCCCEEEECCC----------CHHHHHHHHHhCC-C-CEEEcCCcccCccCHHHHHHcCCCEEEECHHhcC
Confidence 45678889999999987542 1345666666654 4 57788999742 2566778899999999999997
Q ss_pred hcccCCHHHHHHHHHHHHHHHHHHHHH
Q 021739 255 SLAVDGEAGVRKVLQMLRDEFELTMAL 281 (308)
Q Consensus 255 ~~~~~G~~~v~~~i~~l~~~l~~~m~~ 281 (308)
+ ..+ .+..+.++++++.....
T Consensus 193 A---~dP---~~aa~~i~~~i~~~~~~ 213 (222)
T 4dbe_A 193 A---GNP---LTALRTINKIIEDKVMK 213 (222)
T ss_dssp S---SSH---HHHHHHHHHHHHHHHHH
T ss_pred C---CCH---HHHHHHHHHHHHHHHHH
Confidence 5 233 23445555665554433
No 211
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=96.80 E-value=0.038 Score=47.58 Aligned_cols=88 Identities=19% Similarity=0.160 Sum_probs=60.1
Q ss_pred HHHHHHHHhcCCCEEE--E-e-------c-CCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeE
Q 021739 155 KDVKWLQTITSLPILV--K-G-------V-LTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 155 ~~i~~ir~~~~~Pv~v--K-~-------~-~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipv 223 (308)
+.++.+|+.+++|++- | . + .+.+.++.+.++|+|.|.++.......+ +....+.+..+++.. ...++
T Consensus 59 ~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~~~~-~~~~~~~i~~i~~~~-~~~~v 136 (234)
T 1yxy_A 59 RDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRDRHD-GLDIASFIRQVKEKY-PNQLL 136 (234)
T ss_dssp HHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSSCCTT-CCCHHHHHHHHHHHC-TTCEE
T ss_pred HHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEcccccCCCC-CccHHHHHHHHHHhC-CCCeE
Confidence 4578888888899842 1 1 0 2457899999999999988654211100 112345667776654 34565
Q ss_pred EEecCCCCHHHHHHHHHcCCCEE
Q 021739 224 FLDGGVRRGTDVFKALALGASGV 246 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~GAd~V 246 (308)
+. ++++.+++.++...|||.+
T Consensus 137 ~~--~~~t~~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 137 MA--DISTFDEGLVAHQAGIDFV 157 (234)
T ss_dssp EE--ECSSHHHHHHHHHTTCSEE
T ss_pred EE--eCCCHHHHHHHHHcCCCEE
Confidence 54 6899999999999999999
No 212
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=96.78 E-value=0.054 Score=50.23 Aligned_cols=119 Identities=15% Similarity=0.125 Sum_probs=85.0
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
.+++.+.+.++++.+.|++.+.+++++| +++.
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~------------------------------------------------~~~~ 175 (378)
T 2qdd_A 144 GTPDQMLGLIAEAAAQGYRTHSAKIGGS------------------------------------------------DPAQ 175 (378)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSS------------------------------------------------CHHH
T ss_pred CCHHHHHHHHHHHHHHhhhheeecCCCC------------------------------------------------ChHH
Confidence 5677777777888888999998887643 1122
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--CCHHHHHHHHH---cCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEE
Q 021739 153 NWKDVKWLQTIT--SLPILVKGV--LTAEDASLAIQ---YGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 225 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~--~~~e~a~~~~~---~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia 225 (308)
..+.++.+|+.+ ++++.+... .+.+++..+.+ .|+ +|. +. .+ +++.+.++++.+ ++||++
T Consensus 176 ~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~i-~iE-------qP--~~-d~~~~~~l~~~~--~iPI~~ 242 (378)
T 2qdd_A 176 DIARIEAISAGLPDGHRVTFDVNRAWTPAIAVEVLNSVRARD-WIE-------QP--CQ-TLDQCAHVARRV--ANPIML 242 (378)
T ss_dssp HHHHHHHHHHSCCTTCEEEEECTTCCCHHHHHHHHTSCCCCC-EEE-------CC--SS-SHHHHHHHHTTC--CSCEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHhCCCc-EEE-------cC--CC-CHHHHHHHHHhC--CCCEEE
Confidence 346789999876 688888854 46666544332 455 442 11 12 677777776655 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEchHH
Q 021739 226 DGGVRRGTDVFKALALG-ASGVFVGRPV 252 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~G-Ad~V~ig~~~ 252 (308)
++.+.+..|+.++++.| +|.|++-...
T Consensus 243 dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 270 (378)
T 2qdd_A 243 DECLHEFSDHLAAWSRGACEGVKIKPNR 270 (378)
T ss_dssp CTTCCSHHHHHHHHHHTCCSEEEECHHH
T ss_pred CCCcCCHHHHHHHHHhCCCCEEEecccc
Confidence 99999999999999877 8999996533
No 213
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=96.76 E-value=0.0084 Score=55.56 Aligned_cols=121 Identities=13% Similarity=0.164 Sum_probs=86.0
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
..+++.+.+.++++.+.|++.+-++++. +++
T Consensus 139 ~~~~~~~~~~a~~~~~~Gf~~iKik~g~-------------------------------------------------~~~ 169 (369)
T 2p8b_A 139 IADPENMAEEAASMIQKGYQSFKMKVGT-------------------------------------------------NVK 169 (369)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCS-------------------------------------------------CHH
T ss_pred CCChHHHHHHHHHHHHcCcCEEEEEeCC-------------------------------------------------CHH
Confidence 4577777777788888999999887642 112
Q ss_pred cCHHHHHHHHHhc--CCCEEEEec--CCHHHHH-----HHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCe
Q 021739 152 LNWKDVKWLQTIT--SLPILVKGV--LTAEDAS-----LAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVP 222 (308)
Q Consensus 152 ~~~~~i~~ir~~~--~~Pv~vK~~--~~~e~a~-----~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 222 (308)
...+.++.+|+.+ ++|+.+... .+.+++. .+.+.|+++|. +. ..+..++.+.++++.+ ++|
T Consensus 170 ~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iP 239 (369)
T 2p8b_A 170 EDVKRIEAVRERVGNDIAIRVDVNQGWKNSANTLTALRSLGHLNIDWIE-------QP-VIADDIDAMAHIRSKT--DLP 239 (369)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEECTTTTBSHHHHHHHHHTSTTSCCSCEE-------CC-BCTTCHHHHHHHHHTC--CSC
T ss_pred HHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHHhCCCcEEE-------CC-CCcccHHHHHHHHHhC--CCC
Confidence 2346788898876 688888754 3444443 34556777764 10 0123567777777665 799
Q ss_pred EEEecCCCCHHHHHHHHHcC-CCEEEEchH
Q 021739 223 VFLDGGVRRGTDVFKALALG-ASGVFVGRP 251 (308)
Q Consensus 223 via~GGI~~~~d~~k~l~~G-Ad~V~ig~~ 251 (308)
|++++.+.+..++.+++..| +|.|++-..
T Consensus 240 I~~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 269 (369)
T 2p8b_A 240 LMIDEGLKSSREMRQIIKLEAADKVNIKLM 269 (369)
T ss_dssp EEESTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred EEeCCCCCCHHHHHHHHHhCCCCEEEeecc
Confidence 99999999999999999987 899999653
No 214
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=96.74 E-value=0.021 Score=53.15 Aligned_cols=119 Identities=13% Similarity=0.077 Sum_probs=86.1
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
..+++.+.+.+++..+.|++.+-+.+++. ++
T Consensus 143 ~~~~e~~~~~a~~~~~~G~~~iKiK~G~~-------------------------------------------------~~ 173 (378)
T 3eez_A 143 AKSVEETRAVIDRYRQRGYVAHSVKIGGD-------------------------------------------------VE 173 (378)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCSC-------------------------------------------------HH
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEeccCCC-------------------------------------------------HH
Confidence 45778888888888889999998887541 11
Q ss_pred cCHHHHHHHHHhc--CCCEEEEec--CCHHHH----HHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeE
Q 021739 152 LNWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 152 ~~~~~i~~ir~~~--~~Pv~vK~~--~~~e~a----~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipv 223 (308)
...+.++++|+.+ +++|.++.. .+.+++ +.+.+.|+ +|. + ..++++.+.++++.+ ++||
T Consensus 174 ~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i-~iE-------q---P~~~~~~~~~l~~~~--~iPI 240 (378)
T 3eez_A 174 RDIARIRDVEDIREPGEIVLYDVNRGWTRQQALRVMRATEDLHV-MFE-------Q---PGETLDDIAAIRPLH--SAPV 240 (378)
T ss_dssp HHHHHHHHHTTSCCTTCEEEEECTTCCCHHHHHHHHHHTGGGTC-CEE-------C---CSSSHHHHHHTGGGC--CCCE
T ss_pred HHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHhccCCe-EEe-------c---CCCCHHHHHHHHhhC--CCCE
Confidence 1246788999886 688888864 455554 45566776 553 1 112566666666554 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEchHH
Q 021739 224 FLDGGVRRGTDVFKALALG-ASGVFVGRPV 252 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~G-Ad~V~ig~~~ 252 (308)
++++.+.+..|+.++++.| +|.|++....
T Consensus 241 a~dE~~~~~~~~~~~l~~~~~d~v~ik~~~ 270 (378)
T 3eez_A 241 SVDECLVTLQDAARVARDGLAEVFGIKLNR 270 (378)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEEEEEHHH
T ss_pred EECCCCCCHHHHHHHHHcCCCCEEEeCchh
Confidence 9999999999999999987 8999987644
No 215
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=96.69 E-value=0.018 Score=54.02 Aligned_cols=119 Identities=12% Similarity=0.062 Sum_probs=86.6
Q ss_pred CchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccC
Q 021739 74 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 153 (308)
Q Consensus 74 d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 153 (308)
+++.+.+.++++.+.||+.+-+.++.+ +....
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~g~~------------------------------------------------~~~~d 206 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKVGQP------------------------------------------------NCAED 206 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCS------------------------------------------------CHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEecCCC------------------------------------------------CHHHH
Confidence 677777777778888999988765421 11223
Q ss_pred HHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEE
Q 021739 154 WKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 225 (308)
Q Consensus 154 ~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia 225 (308)
.+.++.+|+.+ +++|.+... .+.++ ++.+.+.|+++|.= . ..+..++.+.++++.+ ++||++
T Consensus 207 ~e~v~avR~avG~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iEq---P-----~~~~d~~~~~~l~~~~--~iPIa~ 276 (398)
T 2pp0_A 207 IRRLTAVREALGDEFPLMVDANQQWDRETAIRMGRKMEQFNLIWIEE---P-----LDAYDIEGHAQLAAAL--DTPIAT 276 (398)
T ss_dssp HHHHHHHHHHHCSSSCEEEECTTCSCHHHHHHHHHHHGGGTCSCEEC---C-----SCTTCHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCCceeeC---C-----CChhhHHHHHHHHhhC--CCCEEe
Confidence 57789999875 689988754 45554 45667788888741 0 0123567777887766 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 226 DGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
++.+.+..|+.++++.| +|.|++--
T Consensus 277 dE~~~~~~~~~~~i~~~~~d~v~ik~ 302 (398)
T 2pp0_A 277 GEMLTSFREHEQLILGNASDFVQPDA 302 (398)
T ss_dssp CTTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred cCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 99999999999999987 89998753
No 216
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=96.69 E-value=0.0081 Score=52.44 Aligned_cols=68 Identities=7% Similarity=-0.149 Sum_probs=47.5
Q ss_pred cCCcEEEEe-cccc--cCCCCCcchHHHHHHHHHHcc---CCCeEEEecCCCCHHHHHHHHH--cCCCEEEEchHHHH
Q 021739 185 YGAAGIIVS-NHGA--RQLDYVPATVMALEEVVQAAK---GRVPVFLDGGVRRGTDVFKALA--LGASGVFVGRPVPF 254 (308)
Q Consensus 185 ~G~d~i~v~-~~gg--~~~~~~~~~~~~l~~i~~~~~---~~ipvia~GGI~~~~d~~k~l~--~GAd~V~ig~~~l~ 254 (308)
.++|+|.+- -+.| .|. ..+...+-+.++++... .++||.++|||. .+++.++.+ +|||.+.+||+++.
T Consensus 147 ~~~D~vlvMsv~pgfggq~-f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~-~~~~~~~~~~~aGad~~VvGSaIf~ 222 (237)
T 3cu2_A 147 DQIDVIQLLTLDPRNGTKY-PSELILDRVIQVEKRLGNRRVEKLINIDGSMT-LELAKYFKQGTHQIDWLVSGSALFS 222 (237)
T ss_dssp TTCSEEEEESEETTTTEEC-CHHHHHHHHHHHHHHHGGGGGGCEEEEESSCC-HHHHHHHHHSSSCCCCEEECGGGGS
T ss_pred hcCceeeeeeeccCcCCee-cChhHHHHHHHHHHHHHhcCCCceEEEECCcC-HHHHHHHHHhCCCCcEEEEeeHHhC
Confidence 479998762 2222 221 12234455566665542 158999999998 799999999 99999999999774
No 217
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=96.66 E-value=0.0081 Score=51.59 Aligned_cols=80 Identities=13% Similarity=0.149 Sum_probs=58.4
Q ss_pred HHHHHHHHHhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCH
Q 021739 154 WKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRG 232 (308)
Q Consensus 154 ~~~i~~ir~~~-~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~ 232 (308)
.+.++++++.+ ++-+....+.+.++++.+.++|+|+++..+ . +. .+.+..+.. .++++. |++|+
T Consensus 55 ~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~aGAd~v~~p~---~-------d~-~v~~~~~~~--g~~~i~--G~~t~ 119 (214)
T 1wbh_A 55 VDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPG---L-------TE-PLLKAATEG--TIPLIP--GISTV 119 (214)
T ss_dssp HHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCEEESS---C-------CH-HHHHHHHHS--SSCEEE--EESSH
T ss_pred HHHHHHHHHHCcCCEEeeCEEEEHHHHHHHHHcCCCEEEcCC---C-------CH-HHHHHHHHh--CCCEEE--ecCCH
Confidence 46788888876 444555556788999999999999997421 1 12 233333333 567776 49999
Q ss_pred HHHHHHHHcCCCEEEE
Q 021739 233 TDVFKALALGASGVFV 248 (308)
Q Consensus 233 ~d~~k~l~~GAd~V~i 248 (308)
.++.++++.|||.|.+
T Consensus 120 ~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 120 SELMLGMDYGLKEFKF 135 (214)
T ss_dssp HHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCCCCEEEE
Confidence 9999999999999998
No 218
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=96.63 E-value=0.011 Score=55.03 Aligned_cols=90 Identities=14% Similarity=0.137 Sum_probs=63.4
Q ss_pred HHHHHHHHHhcCCCEEEEec---CCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCC
Q 021739 154 WKDVKWLQTITSLPILVKGV---LTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVR 230 (308)
Q Consensus 154 ~~~i~~ir~~~~~Pv~vK~~---~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~ 230 (308)
.+.++++|+.-.+++.+-.. ...+.++.+.++|+|.|.+....+. .....+.+.++++.. .++||++ |.+.
T Consensus 85 ~~~i~~vk~~~~l~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~----~~~~~~~I~~ik~~~-p~v~Vi~-G~v~ 158 (366)
T 4fo4_A 85 AAQVHQVKISGGLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGH----SEGVLQRIRETRAAY-PHLEIIG-GNVA 158 (366)
T ss_dssp HHHHHHHHTTTSCCCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTT----SHHHHHHHHHHHHHC-TTCEEEE-EEEC
T ss_pred HHHHHHHHhcCceeEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCC----CHHHHHHHHHHHHhc-CCCceEe-eeeC
Confidence 45677777654455555433 3468899999999999988543221 112234566676654 3578877 6789
Q ss_pred CHHHHHHHHHcCCCEEEEc
Q 021739 231 RGTDVFKALALGASGVFVG 249 (308)
Q Consensus 231 ~~~d~~k~l~~GAd~V~ig 249 (308)
|.+++.++..+|||+|.+|
T Consensus 159 t~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 159 TAEGARALIEAGVSAVKVG 177 (366)
T ss_dssp SHHHHHHHHHHTCSEEEEC
T ss_pred CHHHHHHHHHcCCCEEEEe
Confidence 9999999999999999995
No 219
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=96.62 E-value=0.0095 Score=51.52 Aligned_cols=80 Identities=24% Similarity=0.236 Sum_probs=57.9
Q ss_pred HHHHHHHHHhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCH
Q 021739 154 WKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRG 232 (308)
Q Consensus 154 ~~~i~~ir~~~-~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~ 232 (308)
.+.++++++.+ ++-+....+.+.++++.+.++|+|+++.. . .+...+...++ . ..+++. |+.|+
T Consensus 56 ~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~aGAd~v~~p-~---------~d~~v~~~ar~-~--g~~~i~--Gv~t~ 120 (224)
T 1vhc_A 56 ADAIRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFVVTP-G---------LNPKIVKLCQD-L--NFPITP--GVNNP 120 (224)
T ss_dssp HHHHHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEEECS-S---------CCHHHHHHHHH-T--TCCEEC--EECSH
T ss_pred HHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHHCCCCEEEEC-C---------CCHHHHHHHHH-h--CCCEEe--ccCCH
Confidence 46788888876 44455555678899999999999999532 1 12233333333 3 456665 49999
Q ss_pred HHHHHHHHcCCCEEEE
Q 021739 233 TDVFKALALGASGVFV 248 (308)
Q Consensus 233 ~d~~k~l~~GAd~V~i 248 (308)
.++.+++++|||.|.+
T Consensus 121 ~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 121 MAIEIALEMGISAVKF 136 (224)
T ss_dssp HHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCCCCEEEE
Confidence 9999999999999998
No 220
>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} SCOP: c.1.10.1
Probab=96.61 E-value=0.15 Score=43.88 Aligned_cols=112 Identities=16% Similarity=0.130 Sum_probs=73.9
Q ss_pred HHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHH---HHccCCCeEEEecCCCCH
Q 021739 156 DVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVV---QAAKGRVPVFLDGGVRRG 232 (308)
Q Consensus 156 ~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~---~~~~~~ipvia~GGI~~~ 232 (308)
.++.+.+. ++++-+=.+++.+.+..+.++|++++...- ||-.+.+.+....+.+++ +....+..+++. +++++
T Consensus 95 A~~~L~~~-GI~vn~TliFS~~QA~~aa~AGa~~iSpfv--gRidd~g~~G~~~i~~~~~~y~~~~~~t~il~A-S~r~~ 170 (220)
T 1l6w_A 95 AIKMLKAE-GIPTLGTAVYGAAQGLLSALAGAEYVAPYV--NRIDAQGGSGIQTVTDLHQLLKMHAPQAKVLAA-SFKTP 170 (220)
T ss_dssp HHHHHHHH-TCCEEEEEECSHHHHHHHHHHTCSEEEEBH--HHHHHTTSCHHHHHHHHHHHHHHHCTTCEEEEB-CCSSH
T ss_pred HHHHHHHC-CCcEEEEEeCCHHHHHHHHHCCCeEEEecc--chhhcccccHHHHHHHHHHHHHhcCCCeEEeec-ccCCH
Confidence 34444433 788877778999999999999999987653 221112223344444443 333334556654 79999
Q ss_pred HHHHHHHHcCCCEEEEchHHHHhcccCCH--HHHHHHHHHH
Q 021739 233 TDVFKALALGASGVFVGRPVPFSLAVDGE--AGVRKVLQML 271 (308)
Q Consensus 233 ~d~~k~l~~GAd~V~ig~~~l~~~~~~G~--~~v~~~i~~l 271 (308)
.++.++...|||.+-+.-.++..+..++. .+++++.+.+
T Consensus 171 ~~v~~~~l~G~d~~Tip~~~l~~l~~h~lt~~~v~~F~~D~ 211 (220)
T 1l6w_A 171 RQALDCLLAGCESITLPLDVAQQMISYPAVDAAVAKFEQDW 211 (220)
T ss_dssp HHHHHHHHTTCSEEEECHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCeEECCHHHHHHHHcCCChHHHHHHHHHHH
Confidence 99999999999999999888887654442 3444444443
No 221
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.59 E-value=0.0025 Score=62.53 Aligned_cols=76 Identities=18% Similarity=0.179 Sum_probs=55.8
Q ss_pred HHHHHHHHcCCcEEEEecccccC-CC-CCcchHHHHHHHHHHccCCCeEEEecCCCCH-----------HHHHHHHHcCC
Q 021739 177 EDASLAIQYGAAGIIVSNHGARQ-LD-YVPATVMALEEVVQAAKGRVPVFLDGGVRRG-----------TDVFKALALGA 243 (308)
Q Consensus 177 e~a~~~~~~G~d~i~v~~~gg~~-~~-~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~-----------~d~~k~l~~GA 243 (308)
+.|+.+.+.|+|.+++.+-.+.. .. ......+.+.++.+.+ .+||+..|||++. +++.+++.+||
T Consensus 284 ~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~--~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGa 361 (555)
T 1jvn_A 284 QLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTV--FVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGA 361 (555)
T ss_dssp HHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTC--CSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhC--CCcEEEeCccccchhcccccchHHHHHHHHHHcCC
Confidence 45788889999999887633211 00 1123456666665544 7999999999998 45999999999
Q ss_pred CEEEEchHHHH
Q 021739 244 SGVFVGRPVPF 254 (308)
Q Consensus 244 d~V~ig~~~l~ 254 (308)
|.|.+|+..+.
T Consensus 362 d~V~igt~~~~ 372 (555)
T 1jvn_A 362 DKVSIGTDAVY 372 (555)
T ss_dssp SEEEECHHHHH
T ss_pred CEEEECCHHhh
Confidence 99999998765
No 222
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=96.56 E-value=0.025 Score=52.41 Aligned_cols=117 Identities=15% Similarity=0.100 Sum_probs=84.4
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
..+++.+.+.++++.+.|++.+-++++.+ .+
T Consensus 144 ~~~~~~~~~~a~~~~~~Gf~~iKik~g~~-------------------------------------------------~~ 174 (371)
T 2ps2_A 144 VGEPEDMRARVAKYRAKGYKGQSVKISGE-------------------------------------------------PV 174 (371)
T ss_dssp SCCHHHHHHHHHHHHTTTCCEEEEECCSC-------------------------------------------------HH
T ss_pred CCCHHHHHHHHHHHHHhChheEEeecCCC-------------------------------------------------HH
Confidence 35778787888888889999998876421 12
Q ss_pred cCHHHHHHHHHhc--CCCEEEEec--CCHHHH----HHH-HHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCe
Q 021739 152 LNWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLA-IQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVP 222 (308)
Q Consensus 152 ~~~~~i~~ir~~~--~~Pv~vK~~--~~~e~a----~~~-~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 222 (308)
...+.++.+|+.+ +++|.+... .+.+++ +.+ .+.|+ +|. + ..+.++.+.++++.+ ++|
T Consensus 175 ~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~~i-~iE-------~---P~~~~~~~~~l~~~~--~iP 241 (371)
T 2ps2_A 175 TDAKRITAALANQQPDEFFIVDANGKLSVETALRLLRLLPHGLDF-ALE-------A---PCATWRECISLRRKT--DIP 241 (371)
T ss_dssp HHHHHHHHHTTTCCTTCEEEEECTTBCCHHHHHHHHHHSCTTCCC-EEE-------C---CBSSHHHHHHHHTTC--CSC
T ss_pred HHHHHHHHHHHhcCCCCEEEEECCCCcCHHHHHHHHHHHHhhcCC-cCc-------C---CcCCHHHHHHHHhhC--CCC
Confidence 2346788898876 688888754 455554 455 56677 653 1 011566777776655 799
Q ss_pred EEEecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 223 VFLDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 223 via~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
|++++.+.+..|+.++++.| +|.|++--
T Consensus 242 I~~dE~~~~~~~~~~~i~~~~~d~v~ik~ 270 (371)
T 2ps2_A 242 IIYDELATNEMSIVKILADDAAEGIDLKI 270 (371)
T ss_dssp EEESTTCCSHHHHHHHHHHTCCSEEEEEH
T ss_pred EEeCCCcCCHHHHHHHHHhCCCCEEEech
Confidence 99999999999999999987 89999854
No 223
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=96.56 E-value=0.13 Score=47.87 Aligned_cols=118 Identities=12% Similarity=0.050 Sum_probs=84.4
Q ss_pred CchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccC
Q 021739 74 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 153 (308)
Q Consensus 74 d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 153 (308)
+++.+.+.++++.+.||+.+-+.++++ +++..
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~~------------------------------------------------~~~~~ 176 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGHR------------------------------------------------DFDRD 176 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCS------------------------------------------------SHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCC------------------------------------------------CHHHH
Confidence 677777777888889999998876431 11223
Q ss_pred HHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHH--cCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeE
Q 021739 154 WKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQ--YGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 154 ~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~--~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipv 223 (308)
.+.++.+|+.+ +++|.+... .+.++ ++.+.+ .++++|. +. ..+..++.+.++++.+. ++||
T Consensus 177 ~e~v~avR~a~G~~~~l~vDan~~~~~~~a~~~~~~l~~~g~~i~~iE-------qP-~~~~~~~~~~~l~~~~~-~iPI 247 (389)
T 2oz8_A 177 LRRLELLKTCVPAGSKVMIDPNEAWTSKEALTKLVAIREAGHDLLWVE-------DP-ILRHDHDGLRTLRHAVT-WTQI 247 (389)
T ss_dssp HHHHHHHHTTSCTTCEEEEECTTCBCHHHHHHHHHHHHHTTCCCSEEE-------SC-BCTTCHHHHHHHHHHCC-SSEE
T ss_pred HHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCceEEe-------CC-CCCcCHHHHHHHHhhCC-CCCE
Confidence 56789999876 578888754 34444 566777 6777663 10 01235677777776542 6999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEc
Q 021739 224 FLDGGVRRGTDVFKALALG-ASGVFVG 249 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~G-Ad~V~ig 249 (308)
++++.+ +..|+.+++..| +|.|++.
T Consensus 248 a~dE~~-~~~~~~~~i~~~~~d~v~ik 273 (389)
T 2oz8_A 248 NSGEYL-DLQGKRLLLEAHAADILNVH 273 (389)
T ss_dssp EECTTC-CHHHHHHHHHTTCCSEEEEC
T ss_pred EeCCCC-CHHHHHHHHHcCCCCEEEEC
Confidence 999999 999999999987 8999996
No 224
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=96.54 E-value=0.015 Score=54.12 Aligned_cols=120 Identities=9% Similarity=0.080 Sum_probs=87.0
Q ss_pred chHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCH
Q 021739 75 RNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNW 154 (308)
Q Consensus 75 ~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 154 (308)
++.+.+.++++.+.|++.+-+.++++. .+++...
T Consensus 147 ~e~~~~~a~~~~~~Gf~~iKlk~g~~g----------------------------------------------~~~~~d~ 180 (374)
T 3sjn_A 147 PEDNVAIVQGLKDQGFSSIKFGGGVMG----------------------------------------------DDPDTDY 180 (374)
T ss_dssp GGGGHHHHHHHHTTTCSEEEEECTTTT----------------------------------------------SCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeccCCCC----------------------------------------------CCHHHHH
Confidence 377777778788889999988876431 0123345
Q ss_pred HHHHHHHHhc--CCCEEEEec--CC-HHHH----HHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEE
Q 021739 155 KDVKWLQTIT--SLPILVKGV--LT-AEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 225 (308)
Q Consensus 155 ~~i~~ir~~~--~~Pv~vK~~--~~-~e~a----~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia 225 (308)
+.++++|+.+ +++|.+... .+ .+++ +.+.+.|+++|.= . . .+.+++.+.++++.+ ++||++
T Consensus 181 ~~v~avR~a~g~~~~l~vDan~~~~d~~~A~~~~~~l~~~~i~~iEq---P---~--~~~~~~~~~~l~~~~--~iPIa~ 250 (374)
T 3sjn_A 181 AIVKAVREAAGPEMEVQIDLASKWHTCGHSAMMAKRLEEFNLNWIEE---P---V--LADSLISYEKLSRQV--SQKIAG 250 (374)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTTTCSHHHHHHHHHHSGGGCCSEEEC---S---S--CTTCHHHHHHHHHHC--SSEEEE
T ss_pred HHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHHHHhhhcCceEEEC---C---C--CcccHHHHHHHHhhC--CCCEEe
Confidence 7789999985 688988854 56 6654 5556778888851 0 0 122567777887765 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 226 DGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
++.+.+..|+.++++.| +|.|++--
T Consensus 251 dE~~~~~~~~~~~l~~~~~d~v~~k~ 276 (374)
T 3sjn_A 251 GESLTTRYEFQEFITKSNADIVQPDI 276 (374)
T ss_dssp CTTCCHHHHHHHHHHHHCCSEECCBT
T ss_pred CCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 99999999999999875 89988754
No 225
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=96.50 E-value=0.0031 Score=52.92 Aligned_cols=137 Identities=9% Similarity=0.018 Sum_probs=85.0
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
+.+-..+.+.++++++.|- -+.+++|--. +++ . ...+-+++ ...+++
T Consensus 39 ~g~I~~L~~iv~~ik~~gK-~vivh~DlI~----------GLs------~---------------d~~ai~fL-~~~~pd 85 (188)
T 1vkf_A 39 KSDILNLKFHLKILKDRGK-TVFVDMDFVN----------GLG------E---------------GEEAILFV-KKAGAD 85 (188)
T ss_dssp CEETTTHHHHHHHHHHTTC-EEEEEGGGEE----------TCC------S---------------SHHHHHHH-HHHTCS
T ss_pred eCcHHHHHHHHHHHHHCCC-eEEEecCccc----------ccC------C---------------CHHHHHHH-HhcCCC
Confidence 3344568889999988874 5567876211 110 0 01112344 334444
Q ss_pred c----CHHHHHHHHHhcCCCEEEEecC-C----HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCe
Q 021739 152 L----NWKDVKWLQTITSLPILVKGVL-T----AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVP 222 (308)
Q Consensus 152 ~----~~~~i~~ir~~~~~Pv~vK~~~-~----~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 222 (308)
. ....++..++ .++..+-+..+ + ...++.+.+...|++.+-- ++-..+.+.++ .++|
T Consensus 86 GIIsTk~~~i~~Akk-~GL~tIqR~FliDs~al~~~~~~I~~~kPD~iEiLP--------g~v~p~~I~~v-----~~~P 151 (188)
T 1vkf_A 86 GIITIKPKNYVVAKK-NGIPAVLRFFALDSKAVERGIEQIETLGVDVVEVLP--------GAVAPKVARKI-----PGRT 151 (188)
T ss_dssp EEEESCHHHHHHHHH-TTCCEEEEEECCSHHHHHHHHHHHHHHTCSEEEEES--------GGGHHHHHTTS-----TTSE
T ss_pred EEEcCcHHHHHHHHH-cCCEEeeEEEEEEeHHHhhhhhhccccCCCeEeecC--------CCchHHHHHHh-----cCCC
Confidence 3 2445666655 36655555442 2 2235566678889887641 12123444433 3799
Q ss_pred EEEecCCCCHHHHHHHHHcCCCEEEEchHHHHhc
Q 021739 223 VFLDGGVRRGTDVFKALALGASGVFVGRPVPFSL 256 (308)
Q Consensus 223 via~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~~ 256 (308)
+|+.|+|++.+|+.+ +.+||++|..++.-+|.+
T Consensus 152 iIaGGlI~t~edv~~-l~aGA~aIsTs~~~LW~~ 184 (188)
T 1vkf_A 152 VIAAGLVETEEEARE-ILKHVSAISTSSRILWKM 184 (188)
T ss_dssp EEEESCCCSHHHHHH-HTTTSSEEEECCHHHHTC
T ss_pred EEEECCcCCHHHHHH-HHCCCeEEEeCCHHHhCC
Confidence 999999999999999 999999999999888853
No 226
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=96.47 E-value=0.062 Score=50.03 Aligned_cols=87 Identities=13% Similarity=0.095 Sum_probs=66.5
Q ss_pred HHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEE
Q 021739 154 WKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 225 (308)
Q Consensus 154 ~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia 225 (308)
.+.++++|+.+ ++++.+... .+.++ ++.+.+.|+++|. +. ..+..+..+.++++.+ .+||++
T Consensus 181 ~~~v~avR~a~g~~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPIa~ 250 (383)
T 3i4k_A 181 TRRVAELAREVGDRVSLRIDINARWDRRTALHYLPILAEAGVELFE-------QP-TPADDLETLREITRRT--NVSVMA 250 (383)
T ss_dssp HHHHHHHHHTTTTTSEEEEECTTCSCHHHHHHHHHHHHHTTCCEEE-------SC-SCTTCHHHHHHHHHHH--CCEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------CC-CChhhHHHHHHHHhhC--CCCEEe
Confidence 56789999986 578888854 45544 5677889999885 10 0122466777777766 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 226 DGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
++.+.+..|+.++++.| +|.|++--
T Consensus 251 dE~~~~~~~~~~~i~~~~~d~v~~k~ 276 (383)
T 3i4k_A 251 DESVWTPAEALAVVKAQAADVIALKT 276 (383)
T ss_dssp STTCSSHHHHHHHHHHTCCSEEEECT
T ss_pred cCccCCHHHHHHHHHcCCCCEEEEcc
Confidence 99999999999999987 89999864
No 227
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=96.46 E-value=0.032 Score=52.62 Aligned_cols=128 Identities=11% Similarity=0.030 Sum_probs=92.2
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
.+++.+.+.++++.+.|++.+-+.+++... .+ + .+.+.
T Consensus 178 ~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~-----------------------------------dg-~------~~~~~ 215 (412)
T 3stp_A 178 GSIEAMQKEAEEAMKGGYKAFKSRFGYGPK-----------------------------------DG-M------PGMRE 215 (412)
T ss_dssp CCHHHHHHHHHHHHTTTCSEEEEECCCCGG-----------------------------------GH-H------HHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCcc-----------------------------------cc-c------chHHH
Confidence 467888888888888999999988754210 00 0 01233
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEE
Q 021739 153 NWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 224 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvi 224 (308)
..+.++++|+.+ +++|.+... .+.++ ++.+.+.|+++|.=- . .+.++..+.++++.+ ++||+
T Consensus 216 die~v~avReavG~d~~L~vDaN~~~~~~~Ai~~~~~Le~~~i~~iEeP------~--~~~d~~~~~~l~~~~--~iPIa 285 (412)
T 3stp_A 216 NLKRVEAVREVIGYDNDLMLECYMGWNLDYAKRMLPKLAPYEPRWLEEP------V--IADDVAGYAELNAMN--IVPIS 285 (412)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEECC------S--CTTCHHHHHHHHHTC--SSCEE
T ss_pred HHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEECC------C--CcccHHHHHHHHhCC--CCCEE
Confidence 467899999986 688988754 45554 566778899988510 1 122567778887765 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEchHH
Q 021739 225 LDGGVRRGTDVFKALALG-ASGVFVGRPV 252 (308)
Q Consensus 225 a~GGI~~~~d~~k~l~~G-Ad~V~ig~~~ 252 (308)
+++.+.+..|+.++++.| +|.|++--..
T Consensus 286 ~dE~~~~~~~~~~li~~~a~D~v~ik~~~ 314 (412)
T 3stp_A 286 GGEHEFSVIGCAELINRKAVSVLQYDTNR 314 (412)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCCHHH
T ss_pred eCCCCCCHHHHHHHHHcCCCCEEecChhh
Confidence 999999999999999987 8999886544
No 228
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=96.45 E-value=0.027 Score=52.67 Aligned_cols=119 Identities=13% Similarity=0.161 Sum_probs=85.5
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
.+++.+.+.++++.+.|++.+-+.++. +++.
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~vKik~g~-------------------------------------------------~~~~ 174 (397)
T 2qde_A 144 GEPEAVAEEALAVLREGFHFVKLKAGG-------------------------------------------------PLKA 174 (397)
T ss_dssp SCHHHHHHHHHHHHHHTCSCEEEECCS-------------------------------------------------CHHH
T ss_pred CCHHHHHHHHHHHHHhhhhheeecccC-------------------------------------------------CHHH
Confidence 467777777777778899998876531 1122
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEE
Q 021739 153 NWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 224 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvi 224 (308)
..+.++.+|+.+ +++|.+... .+.++ ++.+.+.|+++|.= . ..+..++.+.++++.+ ++||+
T Consensus 175 ~~e~v~avR~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq---P-----~~~~~~~~~~~l~~~~--~iPIa 244 (397)
T 2qde_A 175 DIAMVAEVRRAVGDDVDLFIDINGAWTYDQALTTIRALEKYNLSKIEQ---P-----LPAWDLDGMARLRGKV--ATPIY 244 (397)
T ss_dssp HHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCCSCEEC---C-----SCTTCHHHHHHHHTTC--SSCEE
T ss_pred HHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHHhCCCCEEEC---C-----CChhhHHHHHHHHhhC--CCCEE
Confidence 346788999875 688988754 45554 45667788888741 0 0123566777776655 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 225 LDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 225 a~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
+++.+.+..++.++++.| +|.|++--
T Consensus 245 ~dE~~~~~~~~~~~i~~~~~d~v~ik~ 271 (397)
T 2qde_A 245 ADESAQELHDLLAIINKGAADGLMIKT 271 (397)
T ss_dssp ESTTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred EeCCcCCHHHHHHHHHcCCCCEEEEec
Confidence 999999999999999987 89999843
No 229
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=96.44 E-value=0.0089 Score=51.74 Aligned_cols=111 Identities=15% Similarity=0.186 Sum_probs=79.0
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
..+.+...+.++.+.+.|++.+.++...|
T Consensus 34 ~~~~~~~~~~~~al~~gGv~~iel~~k~~--------------------------------------------------- 62 (225)
T 1mxs_A 34 IAREEDILPLADALAAGGIRTLEVTLRSQ--------------------------------------------------- 62 (225)
T ss_dssp CSCGGGHHHHHHHHHHTTCCEEEEESSST---------------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCc---------------------------------------------------
Confidence 55777777788888888999888874211
Q ss_pred cCHHHHHHHHHhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCC
Q 021739 152 LNWKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVR 230 (308)
Q Consensus 152 ~~~~~i~~ir~~~-~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~ 230 (308)
...+.++++++.+ ++-+....+.+.++++.+.++|+|+++..+ . +. .+.+..+.. .++++. |+.
T Consensus 63 ~~~~~i~~l~~~~~~~~igagtvl~~d~~~~A~~aGAd~v~~p~---~-------d~-~v~~~~~~~--g~~~i~--G~~ 127 (225)
T 1mxs_A 63 HGLKAIQVLREQRPELCVGAGTVLDRSMFAAVEAAGAQFVVTPG---I-------TE-DILEAGVDS--EIPLLP--GIS 127 (225)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSSEECSS---C-------CH-HHHHHHHHC--SSCEEC--EEC
T ss_pred cHHHHHHHHHHhCcccEEeeCeEeeHHHHHHHHHCCCCEEEeCC---C-------CH-HHHHHHHHh--CCCEEE--eeC
Confidence 0124577777776 555666666788999999999999996321 1 12 233333343 567765 499
Q ss_pred CHHHHHHHHHcCCCEEEE
Q 021739 231 RGTDVFKALALGASGVFV 248 (308)
Q Consensus 231 ~~~d~~k~l~~GAd~V~i 248 (308)
|+.++.+++..|||.|.+
T Consensus 128 t~~e~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 128 TPSEIMMGYALGYRRFKL 145 (225)
T ss_dssp SHHHHHHHHTTTCCEEEE
T ss_pred CHHHHHHHHHCCCCEEEE
Confidence 999999999999999998
No 230
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=96.42 E-value=0.33 Score=43.32 Aligned_cols=179 Identities=12% Similarity=0.136 Sum_probs=107.2
Q ss_pred ceEeccccCcccCCCHHHHHHHHHHHHcCCceee--c---CCCCCCHHHHhc-------c-CCC-CceEEeeecCCchHH
Q 021739 13 PIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--S---SWATSSVEEVSS-------T-GPG-IRFFQLYVTKHRNVD 78 (308)
Q Consensus 13 Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~--s---~~~~~~~e~i~~-------~-~~~-~~~~Ql~~~~d~~~~ 78 (308)
|.++.|| -.+-.+.+.-..+.+-..+.|+...+ + |..+.+.+|..+ . ... +.+.... ..+.+..
T Consensus 7 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 84 (292)
T 2vc6_A 7 TALVTPF-ADDRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAG-SNSTAEA 84 (292)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHH
T ss_pred EeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHH
Confidence 5566777 44334555556677777788986654 2 234556655332 1 222 6677665 4466777
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHH
Q 021739 79 AQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVK 158 (308)
Q Consensus 79 ~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~ 158 (308)
.++.+.+++.|++++.+. .|... + . .++- ..+..+
T Consensus 85 i~la~~A~~~Gadavlv~--~P~y~--------------~-------------------~-s~~~---------l~~~f~ 119 (292)
T 2vc6_A 85 IAFVRHAQNAGADGVLIV--SPYYN--------------K-------------------P-TQEG---------IYQHFK 119 (292)
T ss_dssp HHHHHHHHHTTCSEEEEE--CCCSS--------------C-------------------C-CHHH---------HHHHHH
T ss_pred HHHHHHHHHcCCCEEEEc--CCCCC--------------C-------------------C-CHHH---------HHHHHH
Confidence 788899999999998765 24320 0 0 0111 134567
Q ss_pred HHHHhcCCCEEEEe-------cCCHHHHHHHHH-c-CCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCC
Q 021739 159 WLQTITSLPILVKG-------VLTAEDASLAIQ-Y-GAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 229 (308)
Q Consensus 159 ~ir~~~~~Pv~vK~-------~~~~e~a~~~~~-~-G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI 229 (308)
.|.+.+++||++=. .++++...++.+ . .+-+|.-+. .+...+.++.+..++++.|+ +|
T Consensus 120 ~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiK~s~----------gd~~~~~~~~~~~~~~f~v~-~G-- 186 (292)
T 2vc6_A 120 AIDAASTIPIIVYNIPGRSAIEIHVETLARIFEDCPNVKGVXDAT----------GNLLRPSLERMACGEDFNLL-TG-- 186 (292)
T ss_dssp HHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECS----------CCTHHHHHHHHHSCTTSEEE-ES--
T ss_pred HHHHhCCCCEEEEeCccccCcCCCHHHHHHHHhhCCCEEEEecCC----------CCHHHHHHHHHHcCCCEEEE-EC--
Confidence 78888899998743 267888877776 3 233443221 12233445554444456665 45
Q ss_pred CCHHHHHHHHHcCCCEEEEchHH
Q 021739 230 RRGTDVFKALALGASGVFVGRPV 252 (308)
Q Consensus 230 ~~~~d~~k~l~~GAd~V~ig~~~ 252 (308)
+-..+..++.+|++++.-+.+-
T Consensus 187 -~d~~~~~~l~~G~~G~is~~~n 208 (292)
T 2vc6_A 187 -EDGTALGYMAHGGHGCISVTAN 208 (292)
T ss_dssp -CGGGHHHHHHTTCCEEEESGGG
T ss_pred -chHHHHHHHHcCCCEEEecHHH
Confidence 2345678889999998887753
No 231
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=96.41 E-value=0.059 Score=46.32 Aligned_cols=125 Identities=14% Similarity=0.222 Sum_probs=80.4
Q ss_pred CchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccC
Q 021739 74 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 153 (308)
Q Consensus 74 d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 153 (308)
+.+.+.+-++.+++.|++++++++-.| |...+
T Consensus 74 E~~~M~~Di~~~~~~GadGvV~G~Lt~------------------------------------------------dg~iD 105 (224)
T 2bdq_A 74 ELRIMEEDILRAVELESDALVLGILTS------------------------------------------------NNHID 105 (224)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEECCBCT------------------------------------------------TSSBC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeeECC------------------------------------------------CCCcC
Confidence 456777778889999999999874221 12233
Q ss_pred HHHHHHHHHhc-CCCEEEEec------CCH-HHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEE
Q 021739 154 WKDVKWLQTIT-SLPILVKGV------LTA-EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 225 (308)
Q Consensus 154 ~~~i~~ir~~~-~~Pv~vK~~------~~~-e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia 225 (308)
.+.++++.+.. ++|+..--. .++ +..+.+.+.|++.|.-|+...+ .........|.++.+...+++.|++
T Consensus 106 ~~~~~~Li~~a~~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rILTSG~~~~--~~a~~g~~~L~~Lv~~a~~ri~Im~ 183 (224)
T 2bdq_A 106 TEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRILLHGSSNG--EPIIENIKHIKALVEYANNRIEIMV 183 (224)
T ss_dssp HHHHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEEECSCSSC--CCGGGGHHHHHHHHHHHTTSSEEEE
T ss_pred HHHHHHHHHHhCCCeEEEECchhccCCcCHHHHHHHHHHcCCCEEECCCCCCC--CcHHHHHHHHHHHHHhhCCCeEEEe
Confidence 45556665543 677776532 233 3468899999999975543211 1122334556666555556799999
Q ss_pred ecCCCCHHHHHHHH-HcCCCEEEEc
Q 021739 226 DGGVRRGTDVFKAL-ALGASGVFVG 249 (308)
Q Consensus 226 ~GGI~~~~d~~k~l-~~GAd~V~ig 249 (308)
.|||+ .+++.+.+ .+|++.+=..
T Consensus 184 GgGV~-~~Ni~~l~~~tGv~e~H~s 207 (224)
T 2bdq_A 184 GGGVT-AENYQYICQETGVKQAHGT 207 (224)
T ss_dssp CSSCC-TTTHHHHHHHHTCCEEEET
T ss_pred CCCCC-HHHHHHHHHhhCCCEEccc
Confidence 99997 56666666 4799888743
No 232
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=96.40 E-value=0.023 Score=53.98 Aligned_cols=132 Identities=16% Similarity=0.135 Sum_probs=92.6
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
.+++.+.+.+++..+.|++.+-+.+++|... +... ... . .+.+.
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~--------------~~G~---------------~~~-~------~~~~~ 188 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTL--------------RGGH---------------MPA-M------TDISL 188 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBT--------------TCCB---------------CCC-H------HHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCccc--------------ccCC---------------Ccc-h------hhHHH
Confidence 4677777778877889999999988876420 0000 000 0 02233
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEE
Q 021739 153 NWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 224 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvi 224 (308)
..+.++++|+.+ +++|.+... .+.++ ++.+.+.|+++|.=- . .+..++.+.++++.+ ++||+
T Consensus 189 d~e~v~avR~avG~d~~L~vDan~~~t~~~A~~~~~~Le~~~i~~iEeP------~--~~~~~~~~~~l~~~~--~iPIa 258 (433)
T 3rcy_A 189 SVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEEP------V--PPDNVGAMAQVARAV--RIPVA 258 (433)
T ss_dssp HHHHHHHHHHHHTTSSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEECC------S--CTTCHHHHHHHHHHS--SSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHhhhcCCCEEECC------C--ChhhHHHHHHHHhcc--CCCEE
Confidence 467899999986 688888753 45555 466777899988510 0 122567778887776 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 225 LDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 225 a~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
+++.+.+..|+.++++.| +|.|++--
T Consensus 259 ~dE~~~~~~~~~~~l~~g~~D~v~~d~ 285 (433)
T 3rcy_A 259 TGERLTTKAEFAPVLREGAAAILQPAL 285 (433)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred ecCCCCCHHHHHHHHHcCCCCEEEeCc
Confidence 999999999999999987 89998764
No 233
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=96.38 E-value=0.058 Score=50.47 Aligned_cols=126 Identities=13% Similarity=0.029 Sum_probs=90.1
Q ss_pred CCchHHHHHH-HHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 73 KHRNVDAQLV-KRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 73 ~d~~~~~~~~-~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
.+++.+.+.+ ++..+.|++.+-+.++++... ...+++
T Consensus 138 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~------------------------------------------~~~~~~ 175 (393)
T 4dwd_A 138 RSVDEVVREVARRVEAEQPAAVKIRWDGDRTR------------------------------------------CDVDIP 175 (393)
T ss_dssp SCHHHHHHHHHHHHHHHCCSEEEEECCCCTTC------------------------------------------CSCCHH
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEccCCCCcc------------------------------------------cccCHH
Confidence 3567766666 666778999998887654210 001233
Q ss_pred cCHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeE
Q 021739 152 LNWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 152 ~~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipv 223 (308)
...+.++++|+.+ +++|.+... .+.++ ++.+.+.|+++|.= . . .+.+++.+.++++.+ ++||
T Consensus 176 ~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEq---P---~--~~~d~~~~~~l~~~~--~iPI 245 (393)
T 4dwd_A 176 GDIAKARAVRELLGPDAVIGFDANNGYSVGGAIRVGRALEDLGYSWFEE---P---V--QHYHVGAMGEVAQRL--DITV 245 (393)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHHHHHHTTCSEEEC---C---S--CTTCHHHHHHHHHHC--SSEE
T ss_pred HHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhhCCCEEEC---C---C--CcccHHHHHHHHhhC--CCCE
Confidence 3467899999985 689998854 45554 56778889998851 0 1 122567777777765 7999
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEEch
Q 021739 224 FLDGGVRRGTDVFKALALGASGVFVGR 250 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~GAd~V~ig~ 250 (308)
+++..+.+..|+.++++.|+|.|++--
T Consensus 246 a~dE~~~~~~~~~~~i~~~~d~v~~k~ 272 (393)
T 4dwd_A 246 SAGEQTYTLQALKDLILSGVRMVQPDI 272 (393)
T ss_dssp EBCTTCCSHHHHHHHHHHTCCEECCCT
T ss_pred EecCCcCCHHHHHHHHHcCCCEEEeCc
Confidence 999999999999999998899998854
No 234
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=96.38 E-value=0.0055 Score=54.27 Aligned_cols=68 Identities=22% Similarity=0.117 Sum_probs=55.1
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
.+.|+...+.|++.+++-.-.+ ...+.+.++.+.+ .+|+...|||++. |+.+.+ +||+-|.+|+.++.
T Consensus 41 ~~~A~~~~~~Ga~~l~vvDL~~-------~n~~~i~~i~~~~--~~pv~vgGGir~~-~~~~~l-~Ga~~Viigs~a~~ 108 (260)
T 2agk_A 41 SYYAKLYKDRDVQGCHVIKLGP-------NNDDAAREALQES--PQFLQVGGGINDT-NCLEWL-KWASKVIVTSWLFT 108 (260)
T ss_dssp HHHHHHHHHTTCTTCEEEEESS-------SCHHHHHHHHHHS--TTTSEEESSCCTT-THHHHT-TTCSCEEECGGGBC
T ss_pred HHHHHHHHHcCCCEEEEEeCCC-------CCHHHHHHHHhcC--CceEEEeCCCCHH-HHHHHh-cCCCEEEECcHHHh
Confidence 3678999999999998743221 3466777777765 6899999999987 999999 99999999998875
No 235
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=96.34 E-value=0.027 Score=52.47 Aligned_cols=119 Identities=10% Similarity=0.077 Sum_probs=84.8
Q ss_pred CCc---hHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcc
Q 021739 73 KHR---NVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQID 149 (308)
Q Consensus 73 ~d~---~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 149 (308)
.++ +.+.+.++++.+.|++.+-+.++++ +
T Consensus 135 ~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~------------------------------------------------~ 166 (382)
T 2gdq_A 135 DSPQWISRSVSNVEAQLKKGFEQIKVKIGGT------------------------------------------------S 166 (382)
T ss_dssp SSTTHHHHHHHHHHHHHTTTCCEEEEECSSS------------------------------------------------C
T ss_pred CCcccHHHHHHHHHHHHHcCCCEEEEcCCCC------------------------------------------------C
Confidence 456 7777777778888999998875421 1
Q ss_pred cccCHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHc-CCcEEEEecccccCCCCCcchHHHHHHHHHHccCC
Q 021739 150 RSLNWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQY-GAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGR 220 (308)
Q Consensus 150 ~~~~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~-G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 220 (308)
++...+.++.+|+.+ ++++.+... .+.++ ++.+.+. |+++|. +. ..+.+++.+.++++.+ +
T Consensus 167 ~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~ 236 (382)
T 2gdq_A 167 FKEDVRHINALQHTAGSSITMILDANQSYDAAAAFKWERYFSEWTNIGWLE-------EP-LPFDQPQDYAMLRSRL--S 236 (382)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHTTHHHHTTCSCEEEEE-------CC-SCSSCHHHHHHHHTTC--S
T ss_pred HHHHHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHhhccCCeEEE-------CC-CCcccHHHHHHHHhhC--C
Confidence 122357788999876 688888754 45555 4566667 777764 10 0123567777776655 7
Q ss_pred CeEEEecCCCCHHHHHHHHHcC-CCEEEEc
Q 021739 221 VPVFLDGGVRRGTDVFKALALG-ASGVFVG 249 (308)
Q Consensus 221 ipvia~GGI~~~~d~~k~l~~G-Ad~V~ig 249 (308)
+||++++.+.+..++.++++.| +|.|++-
T Consensus 237 iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 266 (382)
T 2gdq_A 237 VPVAGGENMKGPAQYVPLLSQRCLDIIQPD 266 (382)
T ss_dssp SCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred CCEEecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 9999999999999999999987 8998874
No 236
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=96.30 E-value=0.028 Score=52.50 Aligned_cols=119 Identities=8% Similarity=0.016 Sum_probs=84.6
Q ss_pred CchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccC
Q 021739 74 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 153 (308)
Q Consensus 74 d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 153 (308)
+++.+.+.++++.+.|++.+-+.++++ +++..
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~------------------------------------------------~~~~~ 196 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGA------------------------------------------------PIEED 196 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSS------------------------------------------------CHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCC------------------------------------------------CHHHH
Confidence 667777777777788999998876431 11223
Q ss_pred HHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEE
Q 021739 154 WKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 225 (308)
Q Consensus 154 ~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia 225 (308)
.+.++.+|+.+ +++|.+... .+.++ ++.+.+.|+++|. +. ..+..++.+.++++.+ ++||++
T Consensus 197 ~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPIa~ 266 (392)
T 1tzz_A 197 RMRIEAVLEEIGKDAQLAVDANGRFNLETGIAYAKMLRDYPLFWYE-------EV-GDPLDYALQAALAEFY--PGPMAT 266 (392)
T ss_dssp HHHHHHHHHHHTTTCEEEEECTTCCCHHHHHHHHHHHTTSCCSEEE-------CC-SCTTCHHHHHHHTTTC--CSCEEE
T ss_pred HHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCCCeec-------CC-CChhhHHHHHHHHhhC--CCCEEE
Confidence 46788888875 588888753 45554 4566778888874 10 0123566677776554 799999
Q ss_pred ecCCCCHHHHHHHHHcC-----CCEEEEch
Q 021739 226 DGGVRRGTDVFKALALG-----ASGVFVGR 250 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~G-----Ad~V~ig~ 250 (308)
++.+.+..|+.+++..| +|.|++--
T Consensus 267 dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~ 296 (392)
T 1tzz_A 267 GENLFSHQDARNLLRYGGMRPDRDWLQFDC 296 (392)
T ss_dssp CTTCCSHHHHHHHHHHSCCCTTTCEECCCT
T ss_pred CCCCCCHHHHHHHHHcCCCccCCcEEEECc
Confidence 99999999999999987 89998853
No 237
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=96.24 E-value=0.021 Score=53.62 Aligned_cols=131 Identities=15% Similarity=0.101 Sum_probs=89.9
Q ss_pred CchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccC
Q 021739 74 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 153 (308)
Q Consensus 74 d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 153 (308)
+++.+.+.+++..+.|++.+-+.++++..+.. +. .. ...+++..
T Consensus 151 ~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~-------------------------------g~----~~-~~~~~~~d 194 (404)
T 4e5t_A 151 DADMAAEAAAKAVDQGFTAVKFDPAGAYTIYD-------------------------------GH----QP-SLEDLERS 194 (404)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTTC-------------------------------SB----CC-CHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEeeCCCCCCcccc-------------------------------cc----cc-cHHHHHHH
Confidence 56777777777777899999888776532100 00 00 00122334
Q ss_pred HHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEE
Q 021739 154 WKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 225 (308)
Q Consensus 154 ~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia 225 (308)
.+.++++|+.+ +++|.+... .+.++ ++.+.+.|+++|.=- . .+.++..+.++++.+ ++||++
T Consensus 195 ~~~v~avR~a~G~d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEeP------~--~~~~~~~~~~l~~~~--~iPIa~ 264 (404)
T 4e5t_A 195 EAFCKQIRAAVGTKADLLFGTHGQFTVSGAKRLARRLEAYDPLWFEEP------I--PPEKPEDMAEVARYT--SIPVAT 264 (404)
T ss_dssp HHHHHHHHHHHGGGSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEECC------S--CTTCHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHHHHHHcCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCcEEECC------C--CcccHHHHHHHHhhC--CCCEEe
Confidence 67899999986 688988754 45554 466778899988510 0 122567778887776 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 226 DGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
++.+.+..|+.++++.| +|.|++--
T Consensus 265 dE~~~~~~~~~~~i~~~a~d~v~~d~ 290 (404)
T 4e5t_A 265 GERLCTKYEFSRVLETGAASILQMNL 290 (404)
T ss_dssp CTTCCHHHHHHHHHHHTCCSEECCCT
T ss_pred CCCcCCHHHHHHHHHhCCCCEEecCc
Confidence 99999999999999987 78888754
No 238
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=96.23 E-value=0.058 Score=49.67 Aligned_cols=120 Identities=17% Similarity=0.173 Sum_probs=84.7
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
.+++.+.+.+++..+.|++.+-+.++++ ++.
T Consensus 138 ~~~~~~~~~a~~~~~~G~~~~K~K~g~~-------------------------------------------------~~~ 168 (354)
T 3jva_A 138 DEPNVMAQKAVEKVKLGFDTLKIKVGTG-------------------------------------------------IEA 168 (354)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSC-------------------------------------------------HHH
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEEeCCC-------------------------------------------------HHH
Confidence 4677777777777778999987766421 111
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--CCHHHH----HHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEE
Q 021739 153 NWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 224 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~--~~~e~a----~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvi 224 (308)
..+.++++|+.+ ++++.+... .+.+++ +.+.+.|+++|. +. ..+.++..+.++++.+ ++||+
T Consensus 169 d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~L~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPIa 238 (354)
T 3jva_A 169 DIARVKAIREAVGFDIKLRLDANQAWTPKDAVKAIQALADYQIELVE-------QP-VKRRDLEGLKYVTSQV--NTTIM 238 (354)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHTTTSCEEEEE-------CC-SCTTCHHHHHHHHHHC--SSEEE
T ss_pred HHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------CC-CChhhHHHHHHHHHhC--CCCEE
Confidence 246788899875 678888754 455554 455566777774 10 0122567777777765 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEchH
Q 021739 225 LDGGVRRGTDVFKALALG-ASGVFVGRP 251 (308)
Q Consensus 225 a~GGI~~~~d~~k~l~~G-Ad~V~ig~~ 251 (308)
+++.+.+..|+.+++..| +|.|++--.
T Consensus 239 ~dE~~~~~~~~~~~l~~~~~d~v~~k~~ 266 (354)
T 3jva_A 239 ADESCFDAQDALELVKKGTVDVINIKLM 266 (354)
T ss_dssp ESTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred EcCCcCCHHHHHHHHHcCCCCEEEECch
Confidence 999999999999999976 899998753
No 239
>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1
Probab=96.22 E-value=0.15 Score=43.90 Aligned_cols=101 Identities=24% Similarity=0.140 Sum_probs=68.3
Q ss_pred HHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHH---HHccCCCeEEEecCCCCH
Q 021739 156 DVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVV---QAAKGRVPVFLDGGVRRG 232 (308)
Q Consensus 156 ~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~---~~~~~~ipvia~GGI~~~ 232 (308)
.++.+.+. ++++-+=.+++.+.+..+.++|++++...- ||-.+.+.+....+.+++ +....+..+++ .++|++
T Consensus 102 A~~~L~~~-GI~vN~TliFS~~Qa~~aa~AGa~~iSpFV--gRidd~g~~G~~~v~~i~~~~~~~~~~t~vl~-AS~r~~ 177 (223)
T 1wx0_A 102 ACKRLSAE-GIKVNMTLIFSANQALLAARAGASYVSPFL--GRVDDISWDGGELLREIVEMIQVQDLPVKVIA-ASIRHP 177 (223)
T ss_dssp HHHHHHHT-TCCEEEEEECSHHHHHHHHHTTCSEEEEBH--HHHHHTTSCHHHHHHHHHHHHHHTTCSCEEEE-BCCCSH
T ss_pred HHHHHHHC-CCcEEEEEeCCHHHHHHHHHCCCeEEEecc--chHhhcCCCHHHHHHHHHHHHHHcCCCeEEee-cccCCH
Confidence 34444332 788877778999999999999999887653 221122223344444443 33333455555 479999
Q ss_pred HHHHHHHHcCCCEEEEchHHHHhcccCC
Q 021739 233 TDVFKALALGASGVFVGRPVPFSLAVDG 260 (308)
Q Consensus 233 ~d~~k~l~~GAd~V~ig~~~l~~~~~~G 260 (308)
.++.++...|||.+-+.-.++..+..++
T Consensus 178 ~~v~~~~l~G~d~~Tip~~~l~~l~~h~ 205 (223)
T 1wx0_A 178 RHVTEAALLGADIATMPHAVFKQLLKHP 205 (223)
T ss_dssp HHHHHHHHTTCSEEEECHHHHHHHTCCH
T ss_pred HHHHHHHHhCCCEEECCHHHHHHHHcCC
Confidence 9999999999999999888888765443
No 240
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=96.21 E-value=0.39 Score=46.41 Aligned_cols=68 Identities=15% Similarity=0.185 Sum_probs=51.4
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 249 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig 249 (308)
.+.+..+.++|+|.|.+....+. ....++.+.++++.. +++||++ |+|.+.+++.++..+|||+|.+|
T Consensus 258 ~era~aLveaGvd~I~Id~a~g~----~~~v~~~i~~i~~~~-~~~~vi~-g~v~t~e~a~~~~~aGad~i~vg 325 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHGH----SQGVIDKVKEVRAKY-PSLNIIA-GNVATAEATKALIEAGANVVKVG 325 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTT----SHHHHHHHHHHHHHC-TTSEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhhccceEEecccccc----hhhhhhHHHHHHHhC-CCceEEe-eeeccHHHHHHHHHhCCCEEEEC
Confidence 56788899999999998653221 122445677777665 3578875 78999999999999999999874
No 241
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=96.20 E-value=0.79 Score=42.55 Aligned_cols=205 Identities=12% Similarity=0.040 Sum_probs=105.7
Q ss_pred eecCccc---CCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCCCHHHHh-ccCC--------CCceEEeee
Q 021739 4 TVLGFNI---SMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVS-STGP--------GIRFFQLYV 71 (308)
Q Consensus 4 ~~~g~~~---~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~~e~i~-~~~~--------~~~~~Ql~~ 71 (308)
+|.++.+ ..|++||=++.....+.+--..++++|++.|+..+=.. ....+.+. +..+ +...+++|-
T Consensus 17 ~~~~~~ig~~~~~~IIAEiG~NH~Gsle~A~~li~~Ak~aGAdavKfQ--~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~ 94 (385)
T 1vli_A 17 QIANKTVGKDAPVFIIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQ--MFQADRMYQKDPGLYKTAAGKDVSIFSLVQ 94 (385)
T ss_dssp EETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEC--CBCGGGGTSCCC---------CCCHHHHGG
T ss_pred eECCEEeCCCCCcEEEEeecCcccccHHHHHHHHHHHHHhCCCEEeee--eeccCcccCcchhhhccCCCCCccHHHHHH
Confidence 4555555 46899998876644444344679999999998875432 11222221 1110 000112221
Q ss_pred --cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcc
Q 021739 72 --TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQID 149 (308)
Q Consensus 72 --~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 149 (308)
.-.+++...+.+.+++.|..++ + +|.. ...-+.-..+..| .++-. + .+.
T Consensus 95 ~~~l~~e~~~~L~~~~~~~Gi~~~--s--tpfD-~~svd~l~~~~vd--------------~~KIg--S--~~~------ 145 (385)
T 1vli_A 95 SMEMPAEWILPLLDYCREKQVIFL--S--TVCD-EGSADLLQSTSPS--------------AFKIA--S--YEI------ 145 (385)
T ss_dssp GBSSCGGGHHHHHHHHHHTTCEEE--C--BCCS-HHHHHHHHTTCCS--------------CEEEC--G--GGT------
T ss_pred hcCCCHHHHHHHHHHHHHcCCcEE--E--ccCC-HHHHHHHHhcCCC--------------EEEEC--c--ccc------
Confidence 2357888888889999997654 2 2332 1111221122212 11111 0 110
Q ss_pred cccCHHHHHHHHHhcCCCEEEEec-CCHHH----HHHHHHcCC-cEEEEecccccCCCCCcchHHHHHHHHHHccCCCeE
Q 021739 150 RSLNWKDVKWLQTITSLPILVKGV-LTAED----ASLAIQYGA-AGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 150 ~~~~~~~i~~ir~~~~~Pv~vK~~-~~~e~----a~~~~~~G~-d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipv 223 (308)
..+..|+++.+ ++.||++|.. .|.++ ++.+.+.|. +.+.+.....+........+..+..+++.. ..+||
T Consensus 146 --~N~pLL~~va~-~gKPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f-~~lpV 221 (385)
T 1vli_A 146 --NHLPLLKYVAR-LNRPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAF-PEAVI 221 (385)
T ss_dssp --TCHHHHHHHHT-TCSCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHS-TTSEE
T ss_pred --cCHHHHHHHHh-cCCeEEEECCCCCHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHc-CCCCE
Confidence 13567888765 6999999976 45655 345556787 555554322211100111344555555543 14788
Q ss_pred EEecCCCC--HHHHHHHHHcCCC
Q 021739 224 FLDGGVRR--GTDVFKALALGAS 244 (308)
Q Consensus 224 ia~GGI~~--~~d~~k~l~~GAd 244 (308)
..++ =.. ..-...|+++||+
T Consensus 222 G~Sd-Ht~G~~~~~~AAvAlGA~ 243 (385)
T 1vli_A 222 GFSD-HSEHPTEAPCAAVRLGAK 243 (385)
T ss_dssp EEEE-CCSSSSHHHHHHHHTTCS
T ss_pred EeCC-CCCCchHHHHHHHHcCCC
Confidence 6544 332 3344456789999
No 242
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=96.18 E-value=0.026 Score=52.25 Aligned_cols=68 Identities=19% Similarity=0.074 Sum_probs=51.7
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 249 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig 249 (308)
.+.++.+.++|+|.|.+....|. ....++.+.++++.. .++||++ |++.|++++.++..+|||+|.+|
T Consensus 102 ~e~~~~a~~aGvdvI~id~a~G~----~~~~~e~I~~ir~~~-~~~~Vi~-G~V~T~e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 102 LQRAEALRDAGADFFCVDVAHAH----AKYVGKTLKSLRQLL-GSRCIMA-GNVATYAGADYLASCGADIIKAG 169 (361)
T ss_dssp HHHHHHHHHTTCCEEEEECSCCS----SHHHHHHHHHHHHHH-TTCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCC----cHhHHHHHHHHHHhc-CCCeEEE-cCcCCHHHHHHHHHcCCCEEEEc
Confidence 46789999999999988643222 112356677777654 3688887 67999999999999999999985
No 243
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=96.15 E-value=0.034 Score=47.37 Aligned_cols=110 Identities=26% Similarity=0.273 Sum_probs=79.2
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
..+.+...+.++.+.+.|++.+.++..+|.
T Consensus 21 ~~~~~~~~~~~~~l~~gGv~~iel~~k~~~-------------------------------------------------- 50 (207)
T 2yw3_A 21 VRGGEDLLGLARVLEEEGVGALEITLRTEK-------------------------------------------------- 50 (207)
T ss_dssp CCSCCCHHHHHHHHHHTTCCEEEEECSSTH--------------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCChH--------------------------------------------------
Confidence 556677777888888899999988753220
Q ss_pred cCHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCC
Q 021739 152 LNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR 231 (308)
Q Consensus 152 ~~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~ 231 (308)
..+.++.+++ .++.+....+.+.++++.+.++|+|+++.... +...+... +.. .+|++. |+.|
T Consensus 51 -~~~~i~~~~~-~~~~~gag~vl~~d~~~~A~~~GAd~v~~~~~----------d~~v~~~~-~~~--g~~~i~--G~~t 113 (207)
T 2yw3_A 51 -GLEALKALRK-SGLLLGAGTVRSPKEAEAALEAGAAFLVSPGL----------LEEVAALA-QAR--GVPYLP--GVLT 113 (207)
T ss_dssp -HHHHHHHHTT-SSCEEEEESCCSHHHHHHHHHHTCSEEEESSC----------CHHHHHHH-HHH--TCCEEE--EECS
T ss_pred -HHHHHHHHhC-CCCEEEeCeEeeHHHHHHHHHcCCCEEEcCCC----------CHHHHHHH-HHh--CCCEEe--cCCC
Confidence 1256777777 66777777777889999999999999964211 12222222 233 567766 4899
Q ss_pred HHHHHHHHHcCCCEEEE
Q 021739 232 GTDVFKALALGASGVFV 248 (308)
Q Consensus 232 ~~d~~k~l~~GAd~V~i 248 (308)
+.++.++.+.|||.+.+
T Consensus 114 ~~e~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 114 PTEVERALALGLSALKF 130 (207)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHCCCCEEEE
Confidence 99999999999999988
No 244
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.12 E-value=0.035 Score=48.85 Aligned_cols=73 Identities=21% Similarity=0.133 Sum_probs=57.1
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
.+.++...++||++|.+-.-.+ . .....+.+..+++.+ ++||+.-++|.+..++..++++|||+|.++...+.
T Consensus 68 ~~~A~~~~~~GA~~isvlt~~~--~--f~G~~~~l~~i~~~v--~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l~ 140 (254)
T 1vc4_A 68 VEAALAYARGGARAVSVLTEPH--R--FGGSLLDLKRVREAV--DLPLLRKDFVVDPFMLEEARAFGASAALLIVALLG 140 (254)
T ss_dssp HHHHHHHHHTTCSEEEEECCCS--S--SCCCHHHHHHHHHHC--CSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHHG
T ss_pred HHHHHHHHHcCCCEEEEecchh--h--hccCHHHHHHHHHhc--CCCEEECCcCCCHHHHHHHHHcCCCEEEECccchH
Confidence 4678999999999998842111 1 112456677777766 89999999999999999999999999999987653
No 245
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=96.09 E-value=0.022 Score=49.77 Aligned_cols=36 Identities=28% Similarity=0.370 Sum_probs=28.9
Q ss_pred CCeEEEecCCCCHH----------HHHHHHHcCCCEEEEchHHHHh
Q 021739 220 RVPVFLDGGVRRGT----------DVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 220 ~ipvia~GGI~~~~----------d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
..+++.+|||+... .+.+++..|||.+.+||+++.+
T Consensus 182 ~~~i~v~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a 227 (245)
T 1eix_A 182 QEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQS 227 (245)
T ss_dssp SSSEEEECCBCCTTCCCTTCCSCBCHHHHHHTTCSEEEECHHHHTS
T ss_pred CCCEEEECCcCCCCCCccchhccCCHHHHHHcCCCEEEECHHHcCC
Confidence 35799999998431 4677789999999999998863
No 246
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=96.01 E-value=0.062 Score=47.13 Aligned_cols=122 Identities=13% Similarity=0.170 Sum_probs=78.2
Q ss_pred CchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccC
Q 021739 74 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 153 (308)
Q Consensus 74 d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 153 (308)
+.+.+.+-++.+++.|++++++++-.| |...+
T Consensus 71 E~~~M~~Di~~~~~~GadGvV~G~Lt~------------------------------------------------dg~iD 102 (256)
T 1twd_A 71 EFAAILEDVRTVRELGFPGLVTGVLDV------------------------------------------------DGNVD 102 (256)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEECCBCT------------------------------------------------TSSBC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeeECC------------------------------------------------CCCcC
Confidence 456677777888999999999874222 12233
Q ss_pred HHHHHHHHHhc-CCCEEEEec----CCHH-HHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEec
Q 021739 154 WKDVKWLQTIT-SLPILVKGV----LTAE-DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDG 227 (308)
Q Consensus 154 ~~~i~~ir~~~-~~Pv~vK~~----~~~e-~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~G 227 (308)
.+.++++.+.. ++|+..--. .++. ..+.+.+.|++.|.-||...+ .......|.++.+... ++.|++.|
T Consensus 103 ~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~~lG~~rILTSG~~~~----a~~g~~~L~~Lv~~a~-~i~Im~Gg 177 (256)
T 1twd_A 103 MPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSGQKSD----ALQGLSKIMELIAHRD-APIIMAGA 177 (256)
T ss_dssp HHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHHHHTCCEEEECTTSSS----TTTTHHHHHHHHTSSS-CCEEEEES
T ss_pred HHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCC----HHHHHHHHHHHHHhhC-CcEEEecC
Confidence 45556665543 577665432 3343 467889999999976543211 1223455555554444 78999999
Q ss_pred CCCCHHHHHHHHHcCCCEEEEc
Q 021739 228 GVRRGTDVFKALALGASGVFVG 249 (308)
Q Consensus 228 GI~~~~d~~k~l~~GAd~V~ig 249 (308)
||+ .+++.+.+.+|++.+=.+
T Consensus 178 Gv~-~~Ni~~l~~tGv~e~H~S 198 (256)
T 1twd_A 178 GVR-AENLHHFLDAGVLEVHSS 198 (256)
T ss_dssp SCC-TTTHHHHHHHTCSEEEEC
T ss_pred CcC-HHHHHHHHHcCCCeEeEC
Confidence 997 466666667899887755
No 247
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=95.96 E-value=0.034 Score=49.90 Aligned_cols=92 Identities=23% Similarity=0.338 Sum_probs=59.0
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+++|||+.-|=.+..++++ +-.+|||++++-.|++
T Consensus 29 v~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 108 (292)
T 3daq_A 29 VNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYY 108 (292)
T ss_dssp HHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 45677899999998776653211111 112334445555667899998766666677664 3347999999999987
Q ss_pred HhcccCCHHHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQMLRD 273 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~~ 273 (308)
+.. .++++.++++.+.+
T Consensus 109 ~~~---~~~~l~~~f~~ia~ 125 (292)
T 3daq_A 109 NKT---NQRGLVKHFEAIAD 125 (292)
T ss_dssp SCC---CHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHH
Confidence 642 45555555555444
No 248
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=95.95 E-value=0.027 Score=52.62 Aligned_cols=136 Identities=15% Similarity=0.138 Sum_probs=89.9
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
.+++.+.+.++++.+.|++.+-+.+++...+... +++. ..++. ..+.+.
T Consensus 136 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~----~~~~--------------------~gg~~-------~~~~~~ 184 (392)
T 2poz_A 136 DTPDEFARAVERPLKEGYGALKFYPLAQRVGSAL----QHVT--------------------RRSMS-------AEAIEL 184 (392)
T ss_dssp CSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEE----ECCB--------------------TTBCC-------HHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccccccccc----cccc--------------------cCCcc-------hhhHHH
Confidence 3677777777888889999999887653211000 0000 00000 012334
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEE
Q 021739 153 NWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 224 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvi 224 (308)
..+.++.+|+.+ +++|.+... .+.++ ++.+.+.|+++|.= . ..+..++.+.++++.+ ++||+
T Consensus 185 ~~e~v~avr~a~G~d~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iE~---P-----~~~~~~~~~~~l~~~~--~ipIa 254 (392)
T 2poz_A 185 AYRRVKAVRDAAGPEIELMVDLSGGLTTDETIRFCRKIGELDICFVEE---P-----CDPFDNGALKVISEQI--PLPIA 254 (392)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEEC---C-----SCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC---C-----CCcccHHHHHHHHhhC--CCCEE
Confidence 567899999876 688888754 45554 45667778887741 0 0123577778887766 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEc
Q 021739 225 LDGGVRRGTDVFKALALG-ASGVFVG 249 (308)
Q Consensus 225 a~GGI~~~~d~~k~l~~G-Ad~V~ig 249 (308)
+++.+.+..++.++++.| +|.|++-
T Consensus 255 ~dE~~~~~~~~~~~i~~~~~d~v~ik 280 (392)
T 2poz_A 255 VGERVYTRFGFRKIFELQACGIIQPD 280 (392)
T ss_dssp ECTTCCHHHHHHHHHTTTCCSEECCC
T ss_pred ecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 999999999999999987 8999873
No 249
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=95.94 E-value=0.077 Score=49.20 Aligned_cols=86 Identities=9% Similarity=0.034 Sum_probs=62.4
Q ss_pred HHHHHHHHHhc--CCCEEEEec--CCHHHH----HHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEE
Q 021739 154 WKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 225 (308)
Q Consensus 154 ~~~i~~ir~~~--~~Pv~vK~~--~~~e~a----~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia 225 (308)
.+.++++|+.+ +.++.+... .+.+++ +.+.+.|+++|. +. ..+.+++.+.++++.+ .+||++
T Consensus 184 ~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPIa~ 253 (372)
T 3tj4_A 184 IARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFE-------EP-LWYDDVTSHARLARNT--SIPIAL 253 (372)
T ss_dssp HHHHHHHHHHSCTTCEEEEECTTCCCHHHHHHHHHHTTTSCEEEEE-------SC-SCTTCHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHHHHHHcCCCCcEEeeCCCCCCHHHHHHHHHHHhhcCCCEEE-------CC-CCchhHHHHHHHHhhc--CCCEEe
Confidence 56789999986 678888754 456554 444556666664 10 0122467777777765 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEc
Q 021739 226 DGGVRRGTDVFKALALG-ASGVFVG 249 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~G-Ad~V~ig 249 (308)
+..+.+..|+.+++..| +|.|++-
T Consensus 254 dE~~~~~~~~~~~i~~~~~d~v~~k 278 (372)
T 3tj4_A 254 GEQLYTVDAFRSFIDAGAVAYVQPD 278 (372)
T ss_dssp CTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred CCCccCHHHHHHHHHcCCCCEEEeC
Confidence 99999999999999987 7888874
No 250
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=95.93 E-value=0.053 Score=50.94 Aligned_cols=128 Identities=11% Similarity=0.023 Sum_probs=88.3
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
.+++.+.+.+++..+.|++.+-+ +++|..... .. . .+.+.
T Consensus 124 ~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~~~~--------------------------------~~-~------~~~~~ 163 (405)
T 3rr1_A 124 DRPADVIAGMKALQAGGFDHFKL-NGCEEMGII--------------------------------DT-S------RAVDA 163 (405)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEE-ESCCSSSCB--------------------------------CS-H------HHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEE-ecCCccccc--------------------------------cc-c------hhHHH
Confidence 46777777888888889999988 765532100 00 0 01223
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEE
Q 021739 153 NWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 224 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvi 224 (308)
..+.++++|+.+ +++|.+... .+.++ ++.+.+.|+++|.= . . .+.++..+.++++.+ ++||+
T Consensus 164 d~e~v~avR~avG~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe---P---~--~~~d~~~~~~l~~~~--~iPIa 233 (405)
T 3rr1_A 164 AVARVAEIRSAFGNTVEFGLDFHGRVSAPMAKVLIKELEPYRPLFIEE---P---V--LAEQAETYARLAAHT--HLPIA 233 (405)
T ss_dssp HHHHHHHHHHTTGGGSEEEEECCSCBCHHHHHHHHHHHGGGCCSCEEC---S---S--CCSSTHHHHHHHTTC--SSCEE
T ss_pred HHHHHHHHHHHhCCCceEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC---C---C--CcccHHHHHHHHhcC--CCCEE
Confidence 457899999986 688888754 45555 46677788888851 0 0 112456667776554 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 225 LDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 225 a~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
+++.+.+..|+.++++.| +|.|++--
T Consensus 234 ~dE~i~~~~~~~~~l~~~a~d~v~~d~ 260 (405)
T 3rr1_A 234 AGERMFSRFDFKRVLEAGGVSILQPDL 260 (405)
T ss_dssp ECTTCCSHHHHHHHHHHCCCSEECCBT
T ss_pred ecCCcCCHHHHHHHHHHhCCCeEEECh
Confidence 999999999999999987 89998853
No 251
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=95.85 E-value=0.041 Score=51.86 Aligned_cols=131 Identities=14% Similarity=0.103 Sum_probs=89.6
Q ss_pred CchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccC
Q 021739 74 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 153 (308)
Q Consensus 74 d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 153 (308)
+++.+.+.+++..+.|++.+-+.++++..+.. +. .+ . . .+++..
T Consensus 144 ~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~------g~-~~---------------------~--~------~~~~~d 187 (412)
T 4e4u_A 144 DPDLAAECAAENVKLGFTAVKFDPAGPYTAYS------GH-QL---------------------S--L------EVLDRC 187 (412)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTTC------CB-CC---------------------C--H------HHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCcccc------cc-cc---------------------c--h------hhHHHH
Confidence 66777777777777899999888765532100 00 00 0 0 012334
Q ss_pred HHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEE
Q 021739 154 WKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 225 (308)
Q Consensus 154 ~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia 225 (308)
.+.++++|+.+ +++|.+... .+.++ ++.+.+.|+++|.= . . .+.++..+.++++.+ ++||++
T Consensus 188 ~~~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe---P---~--~~~d~~~~~~l~~~~--~iPIa~ 257 (412)
T 4e4u_A 188 ELFCRRVREAVGSKADLLFGTHGQMVPSSAIRLAKRLEKYDPLWFEE---P---V--PPGQEEAIAQVAKHT--SIPIAT 257 (412)
T ss_dssp HHHHHHHHHHHTTSSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEEC---C---S--CSSCHHHHHHHHHTC--SSCEEE
T ss_pred HHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHhhhcCCcEEEC---C---C--ChhhHHHHHHHHhhC--CCCEEe
Confidence 67899999986 688888754 45554 46677889998851 0 0 122567777887765 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 226 DGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
++.+.+..|+.++++.| +|.|++--
T Consensus 258 dE~~~~~~~~~~~i~~~a~d~v~~d~ 283 (412)
T 4e4u_A 258 GERLTTKYEFHKLLQAGGASILQLNV 283 (412)
T ss_dssp CTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred cCccCCHHHHHHHHHcCCCCEEEeCc
Confidence 99999999999999987 89988753
No 252
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=95.85 E-value=0.059 Score=48.65 Aligned_cols=92 Identities=14% Similarity=0.208 Sum_probs=58.0
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+++|||+.-|=.+..++++ +-.+|||++++-.|++
T Consensus 43 v~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y 122 (304)
T 3cpr_A 43 AAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYY 122 (304)
T ss_dssp HHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 46677899999998777654321111 122334445556666899987666556666553 3347999999999987
Q ss_pred HhcccCCHHHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQMLRD 273 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~~ 273 (308)
+.. .++++.++++.+.+
T Consensus 123 ~~~---~~~~l~~~f~~ia~ 139 (304)
T 3cpr_A 123 SKP---SQEGLLAHFGAIAA 139 (304)
T ss_dssp SCC---CHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHH
Confidence 642 45555555554443
No 253
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=95.83 E-value=0.048 Score=51.64 Aligned_cols=118 Identities=14% Similarity=0.136 Sum_probs=84.0
Q ss_pred CCc-hHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 73 KHR-NVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 73 ~d~-~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
.++ +.+.+.++++.+.|++.+-+.+++ +..
T Consensus 183 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~-------------------------------------------------~~~ 213 (428)
T 3bjs_A 183 YQPKESLAEEAQEYIARGYKALKLRIGD-------------------------------------------------AAR 213 (428)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCS-------------------------------------------------CHH
T ss_pred CChHHHHHHHHHHHHHCCCCEEEECCCC-------------------------------------------------CHH
Confidence 466 777777777788899998876542 112
Q ss_pred cCHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCC-Ce
Q 021739 152 LNWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGR-VP 222 (308)
Q Consensus 152 ~~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~-ip 222 (308)
...+.++.+|+.+ +++|.+... .+.++ ++.+.+.|+++|.= . . .+.+++.+.++++.+ + +|
T Consensus 214 ~d~e~v~avR~avG~d~~l~vDan~~~~~~eai~~~~~L~~~~i~~iEq---P---~--~~~d~~~~~~l~~~~--~~iP 283 (428)
T 3bjs_A 214 VDIERVRHVRKVLGDEVDILTDANTAYTMADARRVLPVLAEIQAGWLEE---P---F--ACNDFASYREVAKIT--PLVP 283 (428)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSCEEC---C---S--CTTCHHHHHHHTTTC--SSSC
T ss_pred HHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC---C---C--CccCHHHHHHHHHhC--CCCc
Confidence 2346788898875 688888753 45554 46678889998751 0 0 123466667766554 6 99
Q ss_pred EEEecCCCCHHHHHHHHHcC-CCEEEEc
Q 021739 223 VFLDGGVRRGTDVFKALALG-ASGVFVG 249 (308)
Q Consensus 223 via~GGI~~~~d~~k~l~~G-Ad~V~ig 249 (308)
|++++.+.+..++.++++.| +|.|++-
T Consensus 284 Ia~dE~~~~~~~~~~~i~~~~~d~v~ik 311 (428)
T 3bjs_A 284 IAAGENHYTRFEFGQMLDAGAVQVWQPD 311 (428)
T ss_dssp EEECTTCCSHHHHHHHHTTCCEEEECCB
T ss_pred EEcCCCcCCHHHHHHHHHhCCCCEEEeC
Confidence 99999999999999999987 7888774
No 254
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=95.81 E-value=0.043 Score=49.35 Aligned_cols=92 Identities=18% Similarity=0.263 Sum_probs=57.6
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+++|||+.-|=.+..++++ +-.+|||++++-.|++
T Consensus 34 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 113 (297)
T 3flu_A 34 IDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYY 113 (297)
T ss_dssp HHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 45677899999998776653211111 122334445556667899998666556666654 3348999999999987
Q ss_pred HhcccCCHHHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQMLRD 273 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~~ 273 (308)
+.. .++++.++++.+.+
T Consensus 114 ~~~---~~~~l~~~f~~va~ 130 (297)
T 3flu_A 114 NKP---SQEGIYQHFKTIAE 130 (297)
T ss_dssp SCC---CHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHH
Confidence 642 34555555444433
No 255
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=95.79 E-value=0.041 Score=49.35 Aligned_cols=92 Identities=15% Similarity=0.290 Sum_probs=57.9
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+++|||+.-|=.+..++++ +-.+|||++++-.|++
T Consensus 28 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 107 (291)
T 3tak_A 28 VEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYY 107 (291)
T ss_dssp HHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 45677899999998776553211111 112334444555667899998666666666664 3348999999999987
Q ss_pred HhcccCCHHHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQMLRD 273 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~~ 273 (308)
+.. .++++.++++.+.+
T Consensus 108 ~~~---~~~~l~~~f~~ia~ 124 (291)
T 3tak_A 108 NKP---TQEGLYQHYKAIAE 124 (291)
T ss_dssp SCC---CHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHH
Confidence 642 45555555444433
No 256
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=95.77 E-value=0.043 Score=49.82 Aligned_cols=92 Identities=17% Similarity=0.291 Sum_probs=58.2
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+++|||+.-|=.+..++++ +-.+|||++++-.|++
T Consensus 50 v~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y 129 (314)
T 3qze_A 50 VDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYY 129 (314)
T ss_dssp HHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 45677899999998776653211111 112334445556667899998666666666664 3348999999999988
Q ss_pred HhcccCCHHHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQMLRD 273 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~~ 273 (308)
+.. .++++.++++.+.+
T Consensus 130 ~~~---s~~~l~~~f~~va~ 146 (314)
T 3qze_A 130 NKP---TQEGMYQHFRHIAE 146 (314)
T ss_dssp SCC---CHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHH
Confidence 742 45555555544433
No 257
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=95.75 E-value=0.039 Score=49.84 Aligned_cols=90 Identities=20% Similarity=0.279 Sum_probs=56.9
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHHH----HHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKA----LALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~----l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+.+.+++|||+.-|=.+..++++. -.+|||++++-.|++
T Consensus 42 v~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 121 (304)
T 3l21_A 42 ANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYY 121 (304)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 46677899999998776653211111 1223345555566678999987666666666643 347999999999987
Q ss_pred HhcccCCHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQML 271 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l 271 (308)
+.. .++++.++++.+
T Consensus 122 ~~~---s~~~l~~~f~~v 136 (304)
T 3l21_A 122 SKP---PQRGLQAHFTAV 136 (304)
T ss_dssp SCC---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 642 345444444433
No 258
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=95.74 E-value=0.078 Score=49.68 Aligned_cols=89 Identities=10% Similarity=0.009 Sum_probs=66.6
Q ss_pred ccCHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCe
Q 021739 151 SLNWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVP 222 (308)
Q Consensus 151 ~~~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 222 (308)
+...+.++.+|+.+ +++|.+... .+.++ ++.+.+.|+++|.- . ..+..++.+.++++.+ ++|
T Consensus 202 ~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE~---P-----~~~~~~~~~~~l~~~~--~iP 271 (410)
T 2gl5_A 202 KMGEARIAAMREAMGDDADIIVEIHSLLGTNSAIQFAKAIEKYRIFLYEE---P-----IHPLNSDNMQKVSRST--TIP 271 (410)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEEC---S-----SCSSCHHHHHHHHHHC--SSC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCeEEC---C-----CChhhHHHHHHHHhhC--CCC
Confidence 34567899999976 688888754 45554 45667778887741 0 0123577778887776 799
Q ss_pred EEEecCCCCHHHHHHHHHcC-CCEEEEc
Q 021739 223 VFLDGGVRRGTDVFKALALG-ASGVFVG 249 (308)
Q Consensus 223 via~GGI~~~~d~~k~l~~G-Ad~V~ig 249 (308)
|++++.+.+..++.++++.| +|.|++-
T Consensus 272 Ia~dE~~~~~~~~~~~i~~~~~d~v~ik 299 (410)
T 2gl5_A 272 IATGERSYTRWGYRELLEKQSIAVAQPD 299 (410)
T ss_dssp EEECTTCCTTHHHHHHHHTTCCSEECCC
T ss_pred EEecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 99999999999999999987 8999874
No 259
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=95.73 E-value=0.053 Score=48.93 Aligned_cols=93 Identities=18% Similarity=0.206 Sum_probs=59.2
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+++|||+.-|=.+..++++ +-.+|||++++-.|++
T Consensus 38 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 117 (303)
T 2wkj_A 38 VQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFY 117 (303)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCC
Confidence 45677899999998776653211111 122334445555666899987655555555553 3347999999999988
Q ss_pred HhcccCCHHHHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQMLRDE 274 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~~~ 274 (308)
+.. .++++.++++.+.+.
T Consensus 118 ~~~---s~~~l~~~f~~va~a 135 (303)
T 2wkj_A 118 YPF---SFEEHCDHYRAIIDS 135 (303)
T ss_dssp SCC---CHHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHHh
Confidence 642 566666666665554
No 260
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=95.73 E-value=0.052 Score=48.69 Aligned_cols=93 Identities=12% Similarity=0.147 Sum_probs=58.9
Q ss_pred HHHHHH-cCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHH
Q 021739 179 ASLAIQ-YGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPV 252 (308)
Q Consensus 179 a~~~~~-~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~ 252 (308)
++.+.+ .|+|+|.+.++.|....-.. ...+.+..+.+...+++|||+.-|=.+..++++ +-.+|||++++-.|+
T Consensus 30 v~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 109 (293)
T 1f6k_A 30 IRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPF 109 (293)
T ss_dssp HHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 456778 99999998776654211111 122334555556667899987666666666654 334799999999998
Q ss_pred HHhcccCCHHHHHHHHHHHHHH
Q 021739 253 PFSLAVDGEAGVRKVLQMLRDE 274 (308)
Q Consensus 253 l~~~~~~G~~~v~~~i~~l~~~ 274 (308)
++.. .++++.++++.+.+.
T Consensus 110 y~~~---~~~~l~~~f~~va~a 128 (293)
T 1f6k_A 110 YYKF---SFPEIKHYYDTIIAE 128 (293)
T ss_dssp SSCC---CHHHHHHHHHHHHHH
T ss_pred CCCC---CHHHHHHHHHHHHHh
Confidence 7642 455555555555443
No 261
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=95.71 E-value=0.12 Score=48.47 Aligned_cols=86 Identities=9% Similarity=-0.028 Sum_probs=66.4
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEE
Q 021739 153 NWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 224 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvi 224 (308)
..+.++++|+.+ +++|.+... .+.++ ++.+.+.|+++|..- ..++..+.++++.+ ++||+
T Consensus 199 ~~e~v~avR~avG~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE~P----------~~d~~~~~~l~~~~--~iPIa 266 (409)
T 3go2_A 199 LRAHLEALRDGAGPDVEILLDLNFNAKPEGYLKILRELADFDLFWVEID----------SYSPQGLAYVRNHS--PHPIS 266 (409)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHTTTSCCSEEECC----------CSCHHHHHHHHHTC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCeEEEeC----------cCCHHHHHHHHhhC--CCCEE
Confidence 357799999986 688988754 45555 456667899988731 12566777777665 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 225 LDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 225 a~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
+++.+.+..|+.++++.| +|.|++--
T Consensus 267 ~dE~~~~~~~~~~~i~~~~~d~v~~k~ 293 (409)
T 3go2_A 267 SCETLFGIREFKPFFDANAVDVAIVDT 293 (409)
T ss_dssp ECTTCCHHHHHHHHHHTTCCSEEEECH
T ss_pred eCCCcCCHHHHHHHHHhCCCCEEEeCC
Confidence 999999999999999987 89998854
No 262
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=95.71 E-value=0.13 Score=47.89 Aligned_cols=120 Identities=14% Similarity=0.134 Sum_probs=84.7
Q ss_pred CCchHHHHHHHHHHHc-CCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 73 KHRNVDAQLVKRAERA-GFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~-g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
.+++.+.+.+++..+. |++.+-+.++.+ +++
T Consensus 166 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~------------------------------------------------~~~ 197 (383)
T 3toy_A 166 LDARDDERTLRTACDEHGFRAIKSKGGHG------------------------------------------------DLA 197 (383)
T ss_dssp CCHHHHHHHHHHHHHTSCCCEEEEECCSS------------------------------------------------CHH
T ss_pred CCHHHHHHHHHHHHHccCCcEEEEecCCC------------------------------------------------CHH
Confidence 4677777777766677 999887765421 112
Q ss_pred cCHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeE
Q 021739 152 LNWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 152 ~~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipv 223 (308)
...+.++++|+.+ ++++.+... .+.++ ++.+.+.|+++|. +. -.+.+++.+.++++.+ .+||
T Consensus 198 ~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE-------eP-~~~~d~~~~~~l~~~~--~iPI 267 (383)
T 3toy_A 198 TDEAMIKGLRALLGPDIALMLDFNQSLDPAEATRRIARLADYDLTWIE-------EP-VPQENLSGHAAVRERS--EIPI 267 (383)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------CC-SCTTCHHHHHHHHHHC--SSCE
T ss_pred HHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEE-------CC-CCcchHHHHHHHHhhc--CCCE
Confidence 2346788999875 678888754 45554 4666778888885 10 0122566777887765 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 224 FLDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
+++..+.+..|+.++++.| +|.+++--
T Consensus 268 a~dE~~~~~~~~~~~i~~~a~d~v~ik~ 295 (383)
T 3toy_A 268 QAGENWWFPRGFAEAIAAGASDFIMPDL 295 (383)
T ss_dssp EECTTCCHHHHHHHHHHHTCCSEECCCT
T ss_pred EeCCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 9999999999999999987 78888753
No 263
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=95.71 E-value=0.052 Score=48.59 Aligned_cols=92 Identities=22% Similarity=0.319 Sum_probs=57.1
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+++|||+.-|=.+..++.+ +-++|||++++-.|++
T Consensus 27 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 106 (289)
T 2yxg_A 27 INFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYY 106 (289)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 46677899999998776653211111 122334445555666899987666555555553 3347999999999987
Q ss_pred HhcccCCHHHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQMLRD 273 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~~ 273 (308)
+.. .++++.++++.+.+
T Consensus 107 ~~~---s~~~l~~~f~~ia~ 123 (289)
T 2yxg_A 107 NKP---TQEGLRKHFGKVAE 123 (289)
T ss_dssp SCC---CHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHH
Confidence 642 45555555544433
No 264
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=95.69 E-value=0.42 Score=40.48 Aligned_cols=90 Identities=14% Similarity=0.114 Sum_probs=56.4
Q ss_pred HHHHHHHHhcCCCEEEEec-CCHHHHHHHHHcCCcEEEEecc----cccCCCCCcchHHHHHHHHHHccCCCeEEEecCC
Q 021739 155 KDVKWLQTITSLPILVKGV-LTAEDASLAIQYGAAGIIVSNH----GARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 229 (308)
Q Consensus 155 ~~i~~ir~~~~~Pv~vK~~-~~~e~a~~~~~~G~d~i~v~~~----gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI 229 (308)
+.++.+|+ ++|++--.. .+.++...+.+..+|++.+... ||+.. .-+|+.+..+. ..+.|++..||+
T Consensus 89 ~~~~~l~~--~~~vika~~v~~~~~l~~~~~~~~d~~LlD~~~~~~GGtG~---~fdw~~l~~~~---~~~~p~~LAGGL 160 (205)
T 1nsj_A 89 ELCRKIAE--RILVIKAVGVSNERDMERALNYREFPILLDTKTPEYGGSGK---TFDWSLILPYR---DRFRYLVLSGGL 160 (205)
T ss_dssp HHHHHHHT--TSEEEEEEEESSHHHHHHHGGGTTSCEEEEESCSSSSSCCS---CCCGGGTGGGG---GGSSCEEEESSC
T ss_pred HHHHHHhc--CCCEEEEEEcCCHHHHHHHHHcCCCEEEECCCCCCCCCCCC---ccCHHHHHhhh---cCCCcEEEECCC
Confidence 34555543 367663232 3445555555556999998764 33321 12343333221 125799999999
Q ss_pred CCHHHHHHHHH-cCCCEEEEchHHH
Q 021739 230 RRGTDVFKALA-LGASGVFVGRPVP 253 (308)
Q Consensus 230 ~~~~d~~k~l~-~GAd~V~ig~~~l 253 (308)
. ++++.+++. .++.+|=+.|.+=
T Consensus 161 ~-peNV~~ai~~~~p~gVDvsSGvE 184 (205)
T 1nsj_A 161 N-PENVRSAIDVVRPFAVDVSSGVE 184 (205)
T ss_dssp C-TTTHHHHHHHHCCSEEEESGGGE
T ss_pred C-HHHHHHHHHhcCCCEEEECCcee
Confidence 5 889988887 6999999999764
No 265
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=95.68 E-value=0.05 Score=49.04 Aligned_cols=90 Identities=19% Similarity=0.290 Sum_probs=55.9
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+.+.+++|||+.-|=.+..++++ +-.+|||++++-.|++
T Consensus 39 v~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 118 (301)
T 1xky_A 39 VNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYY 118 (301)
T ss_dssp HHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 45677899999998776653211111 122334445555666899987666555555553 3347999999999987
Q ss_pred HhcccCCHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQML 271 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l 271 (308)
+.. .++++.++++.+
T Consensus 119 ~~~---s~~~l~~~f~~v 133 (301)
T 1xky_A 119 NKP---SQEGMYQHFKAI 133 (301)
T ss_dssp SCC---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 642 445555444444
No 266
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=95.67 E-value=0.051 Score=48.76 Aligned_cols=91 Identities=19% Similarity=0.250 Sum_probs=56.7
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+++|||+.-|=.+..++++ +-++|||++++-.|++
T Consensus 27 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 106 (294)
T 2ehh_A 27 IEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYY 106 (294)
T ss_dssp HHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 46677899999998776653211111 122334445555666899987666556666553 3347999999999987
Q ss_pred HhcccCCHHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQMLR 272 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~ 272 (308)
+.. .++++.++++.+.
T Consensus 107 ~~~---s~~~l~~~f~~va 122 (294)
T 2ehh_A 107 NKP---TQRGLYEHFKTVA 122 (294)
T ss_dssp SCC---CHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHH
Confidence 642 4555554544443
No 267
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=95.66 E-value=0.037 Score=50.30 Aligned_cols=92 Identities=18% Similarity=0.224 Sum_probs=58.0
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+++|||+.-|=.+..++++ +-.+|||++++-.|++
T Consensus 49 i~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y 128 (315)
T 3si9_A 49 VEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYY 128 (315)
T ss_dssp HHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 45677899999988776553211111 122334445555667899998666666666664 3458999999999987
Q ss_pred HhcccCCHHHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQMLRD 273 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~~ 273 (308)
+.. .++++.++++.+.+
T Consensus 129 ~~~---~~~~l~~~f~~va~ 145 (315)
T 3si9_A 129 NRP---NQRGLYTHFSSIAK 145 (315)
T ss_dssp SCC---CHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHH
Confidence 642 45555555544433
No 268
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=95.66 E-value=0.099 Score=46.44 Aligned_cols=71 Identities=18% Similarity=0.067 Sum_probs=56.3
Q ss_pred HHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHH
Q 021739 177 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVP 253 (308)
Q Consensus 177 e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l 253 (308)
+.|+...++||++|.+-.-.. ... ...+.|..+++.+ ++||+.-..|.++.++.++.++|||+|.++...+
T Consensus 83 ~~A~~y~~~GA~~IsVltd~~--~f~--Gs~~~L~~ir~~v--~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L 153 (272)
T 3tsm_A 83 ALAKAYEEGGAACLSVLTDTP--SFQ--GAPEFLTAARQAC--SLPALRKDFLFDPYQVYEARSWGADCILIIMASV 153 (272)
T ss_dssp HHHHHHHHTTCSEEEEECCST--TTC--CCHHHHHHHHHTS--SSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTS
T ss_pred HHHHHHHHCCCCEEEEecccc--ccC--CCHHHHHHHHHhc--CCCEEECCccCCHHHHHHHHHcCCCEEEEccccc
Confidence 568899999999998753211 111 2466777777666 7999999999999999999999999999998765
No 269
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=95.65 E-value=0.63 Score=43.30 Aligned_cols=189 Identities=19% Similarity=0.187 Sum_probs=103.1
Q ss_pred CceEeccccCcccCCCHHHHHHHHHHHHcCCceeec-CCCCCCHHHHhccCCCCceEEeeecCCchHHHHHHHHHHHcCC
Q 021739 12 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLS-SWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGF 90 (308)
Q Consensus 12 ~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s-~~~~~~~e~i~~~~~~~~~~Ql~~~~d~~~~~~~~~~~~~~g~ 90 (308)
.+++++|.+.. +.+.-..+++.+++.|+.++.. ++...+ . +..|| +-..+....+.+.+++.|.
T Consensus 143 ~~~Iigpcsve---s~e~a~~~a~~~k~aGa~~vk~q~fkprt-------s--~~~f~---gl~~egl~~L~~~~~~~Gl 207 (385)
T 3nvt_A 143 PVFVFGPCSVE---SYEQVAAVAESIKAKGLKLIRGGAFKPRT-------S--PYDFQ---GLGLEGLKILKRVSDEYGL 207 (385)
T ss_dssp CEEEEECSBCC---CHHHHHHHHHHHHHTTCCEEECBSSCCCS-------S--TTSCC---CCTHHHHHHHHHHHHHHTC
T ss_pred eEEEEEeCCcC---CHHHHHHHHHHHHHcCCCeEEcccccCCC-------C--hHhhc---CCCHHHHHHHHHHHHHcCC
Confidence 36777776654 4444567999999999987754 222111 1 22223 2335666666677788898
Q ss_pred cEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhcCCCEEE
Q 021739 91 KAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILV 170 (308)
Q Consensus 91 ~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~~~Pv~v 170 (308)
.++ .++ ........+ ..+ .+ .++.. + ..+ ...+.++.+. .++.||++
T Consensus 208 ~~~-te~---~d~~~~~~l-~~~-vd--------------~lkIg--s----~~~------~n~~LL~~~a-~~gkPVil 254 (385)
T 3nvt_A 208 GVI-SEI---VTPADIEVA-LDY-VD--------------VIQIG--A----RNM------QNFELLKAAG-RVDKPILL 254 (385)
T ss_dssp EEE-EEC---CSGGGHHHH-TTT-CS--------------EEEEC--G----GGT------TCHHHHHHHH-TSSSCEEE
T ss_pred EEE-Eec---CCHHHHHHH-Hhh-CC--------------EEEEC--c----ccc------cCHHHHHHHH-ccCCcEEE
Confidence 764 232 211111111 011 01 11110 0 000 1245666665 46999999
Q ss_pred Eec--CCHHH----HHHHHHcCCcEEEEecccccCCCC---CcchHHHHHHHHHHccCCCeEEEe----cCCCCHH--HH
Q 021739 171 KGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDY---VPATVMALEEVVQAAKGRVPVFLD----GGVRRGT--DV 235 (308)
Q Consensus 171 K~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~---~~~~~~~l~~i~~~~~~~ipvia~----GGI~~~~--d~ 235 (308)
|.. .+.++ ++.+.+.|.+-|.+--+|.+.... ....+..+..+++.. .+||+.+ +|-+... =.
T Consensus 255 k~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~--~lpV~~D~th~~G~r~~v~~~a 332 (385)
T 3nvt_A 255 KRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKET--HLPVMVDVTHSTGRKDLLLPCA 332 (385)
T ss_dssp ECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHB--SSCEEEEHHHHHCCGGGHHHHH
T ss_pred ecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhc--CCCEEEcCCCCCCccchHHHHH
Confidence 975 46665 355566788666664443322111 122455666666555 6899887 3433332 24
Q ss_pred HHHHHcCCCEEEEch
Q 021739 236 FKALALGASGVFVGR 250 (308)
Q Consensus 236 ~k~l~~GAd~V~ig~ 250 (308)
..|.++||++++|=.
T Consensus 333 ~AAvA~GA~gl~iE~ 347 (385)
T 3nvt_A 333 KAALAIEADGVMAEV 347 (385)
T ss_dssp HHHHHTTCSEEEEEB
T ss_pred HHHHHhCCCEEEEEe
Confidence 467789999999876
No 270
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=95.64 E-value=0.053 Score=49.58 Aligned_cols=92 Identities=12% Similarity=0.072 Sum_probs=56.9
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+.+.+++|||+.-|=.+..++++ +-.+|||++++-.|.+
T Consensus 61 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y 140 (332)
T 2r8w_A 61 IARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSY 140 (332)
T ss_dssp HHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 45677889999998776653211111 122334445555666899987655555555553 3347999999999987
Q ss_pred HhcccCCHHHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQMLRD 273 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~~ 273 (308)
+.. .++++.++++.+.+
T Consensus 141 ~~~---s~~~l~~~f~~VA~ 157 (332)
T 2r8w_A 141 TPL---TQEEAYHHFAAVAG 157 (332)
T ss_dssp SCC---CHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHH
Confidence 642 45555555554443
No 271
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=95.63 E-value=0.13 Score=48.11 Aligned_cols=88 Identities=11% Similarity=0.084 Sum_probs=64.9
Q ss_pred HHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEE
Q 021739 154 WKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 225 (308)
Q Consensus 154 ~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia 225 (308)
.+.++++|+.+ ++++.+... .+.++ ++.+.+.|+++|. +. -.+.+++.+.++++.+ ++||++
T Consensus 206 ~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPIa~ 275 (390)
T 3ugv_A 206 IETAEAVWDAVGRDTALMVDFNQGLDMAEAMHRTRQIDDLGLEWIE-------EP-VVYDNFDGYAQLRHDL--KTPLMI 275 (390)
T ss_dssp HHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHTTSCCSEEE-------CC-SCTTCHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCEEE-------CC-CCcccHHHHHHHHHhc--CCCEEe
Confidence 46788999875 678888754 45555 4566677888885 10 0122567777777765 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEchH
Q 021739 226 DGGVRRGTDVFKALALG-ASGVFVGRP 251 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~G-Ad~V~ig~~ 251 (308)
+..+.+..|+.++++.| +|.|++--.
T Consensus 276 dE~~~~~~~~~~~i~~~a~d~v~ik~~ 302 (390)
T 3ugv_A 276 GENFYGPREMHQALQAGACDLVMPDFM 302 (390)
T ss_dssp CTTCCSHHHHHHHHHTTCCSEECCBHH
T ss_pred CCCcCCHHHHHHHHHcCCCCEEEeCcc
Confidence 99999999999999987 788887643
No 272
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=95.63 E-value=0.041 Score=49.96 Aligned_cols=92 Identities=17% Similarity=0.118 Sum_probs=57.9
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+++|||+.-|=.+..|+++ +-.+|||++++-.|.+
T Consensus 51 v~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 130 (315)
T 3na8_A 51 IERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISY 130 (315)
T ss_dssp HHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 46677899999998776553211111 122334445555667899998666556666654 3458999999999988
Q ss_pred HhcccCCHHHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQMLRD 273 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~~ 273 (308)
+.. .++++.++++.+.+
T Consensus 131 ~~~---s~~~l~~~f~~va~ 147 (315)
T 3na8_A 131 WKL---NEAEVFQHYRAVGE 147 (315)
T ss_dssp SCC---CHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHH
Confidence 742 44555555444433
No 273
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=95.63 E-value=0.21 Score=46.09 Aligned_cols=90 Identities=17% Similarity=0.173 Sum_probs=65.0
Q ss_pred HHHHHHHHHhc--CCCEEEEec--CCHHHH----HHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEE
Q 021739 154 WKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 225 (308)
Q Consensus 154 ~~~i~~ir~~~--~~Pv~vK~~--~~~e~a----~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia 225 (308)
.+.++++|+.+ +.++.+... .+.+++ +.+.+.|+++|. +. ..+.++..+.++++.+ ++||++
T Consensus 172 ~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPIa~ 241 (367)
T 3dg3_A 172 TAVVRALRERFGDAIELYVDGNRGWSAAESLRAMREMADLDLLFAE-------EL-CPADDVLSRRRLVGQL--DMPFIA 241 (367)
T ss_dssp HHHHHHHHHHHGGGSEEEEECTTCSCHHHHHHHHHHTTTSCCSCEE-------SC-SCTTSHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCCEEE-------CC-CCcccHHHHHHHHHhC--CCCEEe
Confidence 46788888875 678887754 455554 455667888774 10 0122466677777765 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEchHHH
Q 021739 226 DGGVRRGTDVFKALALG-ASGVFVGRPVP 253 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~G-Ad~V~ig~~~l 253 (308)
++.+.+..|+.+++..| +|.|++--...
T Consensus 242 dE~~~~~~~~~~~i~~~~~d~v~~k~~~~ 270 (367)
T 3dg3_A 242 DESVPTPADVTREVLGGSATAISIKTART 270 (367)
T ss_dssp CTTCSSHHHHHHHHHHTSCSEEEECHHHH
T ss_pred cCCcCCHHHHHHHHHcCCCCEEEeehhhh
Confidence 99999999999999987 89999854443
No 274
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=95.62 E-value=0.77 Score=42.12 Aligned_cols=243 Identities=16% Similarity=0.170 Sum_probs=123.3
Q ss_pred eecCccc---CCceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCCCHHHHh-ccC----C---CCceEEee--
Q 021739 4 TVLGFNI---SMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVS-STG----P---GIRFFQLY-- 70 (308)
Q Consensus 4 ~~~g~~~---~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~~e~i~-~~~----~---~~~~~Ql~-- 70 (308)
++.|+++ ..|++||.++.....+.+--..++++|++.|+..+=. .....+.+. ... . +...+.+|
T Consensus 8 ~i~~~~iG~~~~~~iIAe~g~NH~gs~e~a~~li~~ak~aGadavKf--q~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~ 85 (349)
T 2wqp_A 8 KIGNRSVGYNHEPLIICEIGINHEGSLKTAFEMVDAAYNAGAEVVKH--QTHIVEDEMSDEAKQVIPGNADVSIYEIMER 85 (349)
T ss_dssp EETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEE--EECCHHHHCCGGGGGCCCTTCSSCHHHHHHH
T ss_pred EECCEEECCCCceEEEEecCCcccCCHHHHHHHHHHHHHhCCCEEee--eecccccccCcchhccccCCCCccHHHHHHH
Confidence 3444444 3589999987653344444467999999999987533 122233321 111 0 00000111
Q ss_pred ecCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccc
Q 021739 71 VTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDR 150 (308)
Q Consensus 71 ~~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 150 (308)
..-.+++...+.+.+++.|..++- + |.. ...-+.-..+..| .++-. + .+ +
T Consensus 86 ~~l~~e~~~~L~~~~~~~Gi~~~s-t---~~d-~~svd~l~~~~v~--------------~~KI~--S--~~-~------ 135 (349)
T 2wqp_A 86 CALNEEDEIKLKEYVESKGMIFIS-T---LFS-RAAALRLQRMDIP--------------AYKIG--S--GE-C------ 135 (349)
T ss_dssp HCCCHHHHHHHHHHHHHTTCEEEE-E---ECS-HHHHHHHHHHTCS--------------CEEEC--G--GG-T------
T ss_pred hCCCHHHHHHHHHHHHHhCCeEEE-e---eCC-HHHHHHHHhcCCC--------------EEEEC--c--cc-c------
Confidence 123577888888889999987642 2 221 1111111112111 11111 0 11 0
Q ss_pred ccCHHHHHHHHHhcCCCEEEEec-CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEE
Q 021739 151 SLNWKDVKWLQTITSLPILVKGV-LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 225 (308)
Q Consensus 151 ~~~~~~i~~ir~~~~~Pv~vK~~-~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia 225 (308)
..+..|+++.+ ++.||++|.. .|.++ ++.+.+.|.+.+.+.....+........+..+..+++.. ..+||..
T Consensus 136 -~n~~LL~~va~-~gkPviLstGmat~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f-~~lpVg~ 212 (349)
T 2wqp_A 136 -NNYPLIKLVAS-FGKPIILSTGMNSIESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAF-PDAIIGL 212 (349)
T ss_dssp -TCHHHHHHHHT-TCSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHC-TTSEEEE
T ss_pred -cCHHHHHHHHh-cCCeEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHC-CCCCEEe
Confidence 13567888765 6999999965 45655 345556788777665322211111112345566665543 1488865
Q ss_pred ecCCCCH-HHHHHHHHcCCCEEEEchHHHHhcccCCHHH---H-HHHHHHHHHHHHHHHHHcCC
Q 021739 226 DGGVRRG-TDVFKALALGASGVFVGRPVPFSLAVDGEAG---V-RKVLQMLRDEFELTMALSGC 284 (308)
Q Consensus 226 ~GGI~~~-~d~~k~l~~GAd~V~ig~~~l~~~~~~G~~~---v-~~~i~~l~~~l~~~m~~~G~ 284 (308)
++ =..+ .-...|+++||+ +|=+=|--.-...|.++ + -+-+..+.++++..-..+|.
T Consensus 213 sd-Ht~G~~~~~AAvAlGA~--iIEkH~tld~a~~G~D~~~SL~p~ef~~lv~~ir~~~~alG~ 273 (349)
T 2wqp_A 213 SD-HTLDNYACLGAVALGGS--ILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGG 273 (349)
T ss_dssp EC-CSSSSHHHHHHHHHTCC--EEEEEBCSCTTCCSTTGGGCBCHHHHHHHHHHHHHHHHHSSC
T ss_pred CC-CCCcHHHHHHHHHhCCC--EEEeCCCccccCCCCChhhhCCHHHHHHHHHHHHHHHHHhCC
Confidence 44 3333 334456779999 33331110001112111 0 13456777777877787884
No 275
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=95.60 E-value=0.15 Score=46.90 Aligned_cols=115 Identities=17% Similarity=0.174 Sum_probs=79.8
Q ss_pred CchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccC
Q 021739 74 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 153 (308)
Q Consensus 74 d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 153 (308)
+++.+.+.++++.+.|++.+-+.++ +...
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~vKik~~---------------------------------------------------~~~~ 169 (368)
T 1sjd_A 141 TIPQLLDVVGGYLDEGYVRIKLKIE---------------------------------------------------PGWD 169 (368)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECB---------------------------------------------------TTBS
T ss_pred CHHHHHHHHHHHHHhCccEEEEecC---------------------------------------------------chhH
Confidence 6676777777777889998876541 1223
Q ss_pred HHHHHHHHHhc--CCCEEEEec--CC---HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEe
Q 021739 154 WKDVKWLQTIT--SLPILVKGV--LT---AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLD 226 (308)
Q Consensus 154 ~~~i~~ir~~~--~~Pv~vK~~--~~---~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~ 226 (308)
.+.++.+|+.+ ++++.+-.. .+ .+.++.+.+.|+++|. +. ..+..++.+.++++.+ ++||+++
T Consensus 170 ~e~v~avr~~~g~~~~l~vDan~~~~~~~~~~~~~l~~~~i~~iE-------~P-~~~~~~~~~~~l~~~~--~ipIa~d 239 (368)
T 1sjd_A 170 VEPVRAVRERFGDDVLLQVDANTAYTLGDAPQLARLDPFGLLLIE-------QP-LEEEDVLGHAELARRI--QTPICLD 239 (368)
T ss_dssp HHHHHHHHHHHCTTSEEEEECTTCCCGGGHHHHHTTGGGCCSEEE-------CC-SCTTCHHHHHHHHTTC--SSCEEES
T ss_pred HHHHHHHHHhcCCCceEEEeccCCCCHHHHHHHHHHHhcCCCeEe-------CC-CChhhHHHHHHHHHhC--CCCEEEC
Confidence 56788888875 577766532 23 3345556678888874 10 0123566677776554 7999999
Q ss_pred cCCCCHHHHHHHHHcC-CCEEEEc
Q 021739 227 GGVRRGTDVFKALALG-ASGVFVG 249 (308)
Q Consensus 227 GGI~~~~d~~k~l~~G-Ad~V~ig 249 (308)
+.+.+..++.+++..| +|.|++=
T Consensus 240 E~~~~~~~~~~~i~~~~~d~v~ik 263 (368)
T 1sjd_A 240 ESIVSARAAADAIKLGAVQIVNIK 263 (368)
T ss_dssp TTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred CCcCCHHHHHHHHHcCCCCEEEec
Confidence 9999999999999987 8999983
No 276
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=95.59 E-value=0.092 Score=49.16 Aligned_cols=135 Identities=13% Similarity=0.086 Sum_probs=89.0
Q ss_pred CchHHHHHHHHHHHcCCcEEEEecCC-CCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 74 HRNVDAQLVKRAERAGFKAIALTVDT-PRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 74 d~~~~~~~~~~~~~~g~~~i~i~~~~-p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
+++.+.+.++++.+.|++.+-+.+.. ...|.. |..| . ++.. ++.+.+.
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~-------~~s~-----------------~--~~~~-----~~~~~~~ 200 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNW-------NQQN-----------------L--NGPL-----TDKILRL 200 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCB-------SCSC-----------------C--CSSC-----CHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCcc-------ccCc-----------------c--cCCC-----chhHHHH
Confidence 67777777788888999999886410 001110 0001 0 0100 0012234
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEE
Q 021739 153 NWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 224 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvi 224 (308)
..+.++.+|+.+ +++|.+... .+.++ ++.+.+.|+++|.= . ..+..++.+.++++.+ ++||+
T Consensus 201 ~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~---P-----~~~~~~~~~~~l~~~~--~iPIa 270 (407)
T 2o56_A 201 GYDRMAAIRDAVGPDVDIIAEMHAFTDTTSAIQFGRMIEELGIFYYEE---P-----VMPLNPAQMKQVADKV--NIPLA 270 (407)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSCEEC---S-----SCSSSHHHHHHHHHHC--CSCEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEeC---C-----CChhhHHHHHHHHHhC--CCCEE
Confidence 567899999976 688888754 45554 46677788888751 0 0123577778887776 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEc
Q 021739 225 LDGGVRRGTDVFKALALG-ASGVFVG 249 (308)
Q Consensus 225 a~GGI~~~~d~~k~l~~G-Ad~V~ig 249 (308)
+++.+.+..++.++++.| +|.|++-
T Consensus 271 ~dE~~~~~~~~~~~i~~~~~d~v~ik 296 (407)
T 2o56_A 271 AGERIYWRWGYRPFLENGSLSVIQPD 296 (407)
T ss_dssp ECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred eCCCcCCHHHHHHHHHcCCCCEEecC
Confidence 999999999999999987 8999874
No 277
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=95.59 E-value=0.055 Score=50.62 Aligned_cols=136 Identities=13% Similarity=0.061 Sum_probs=88.7
Q ss_pred CchHHHHHHHHHHHcCCcEEEEecCC-CCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 74 HRNVDAQLVKRAERAGFKAIALTVDT-PRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 74 d~~~~~~~~~~~~~~g~~~i~i~~~~-p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
+++.+.+.++++.+.|++.+-+.+.. ...|.. |..|. ++.. ++.+.+.
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~-------~~s~~-------------------~g~~-----~~~~~~~ 194 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSR-------EGVFL-------------------EGPL-----PSETIKI 194 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCC-------TTCCC-------------------SSSC-----CHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccc-------ccCcc-------------------cCCC-----chHHHHH
Confidence 67777777788888999999887410 000110 10010 0100 0112334
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEE
Q 021739 153 NWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 224 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvi 224 (308)
..+.++.+|+.+ +++|.+... .+.++ ++.+.+.|+++|.= . ..+.+++.+.++++.+ ++||+
T Consensus 195 ~~e~v~avr~avG~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE~---P-----~~~~d~~~~~~l~~~~--~iPIa 264 (403)
T 2ox4_A 195 GVERVEAIRNAVGPDVDIIVENHGHTDLVSAIQFAKAIEEFNIFFYEE---I-----NTPLNPRLLKEAKKKI--DIPLA 264 (403)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEEC---C-----SCTTSTHHHHHHHHTC--CSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhhCCCEEeC---C-----CChhhHHHHHHHHHhC--CCCEE
Confidence 567899999976 688888754 45554 45667788887741 0 0123466777777665 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 225 LDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 225 a~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
+++.+.+..++.++++.| +|.|++--
T Consensus 265 ~dE~~~~~~~~~~~i~~~~~d~v~ik~ 291 (403)
T 2ox4_A 265 SGERIYSRWGFLPFLEDRSIDVIQPDL 291 (403)
T ss_dssp ECTTCCHHHHHHHHHHTTCCSEECCCH
T ss_pred ecCCcCCHHHHHHHHHcCCCCEEecCc
Confidence 999999999999999987 89998853
No 278
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=95.56 E-value=0.06 Score=48.72 Aligned_cols=95 Identities=19% Similarity=0.192 Sum_probs=56.6
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+++|||+.-|=.+..++++ +-.+|||++++-.|++
T Consensus 35 v~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Pyy 114 (309)
T 3fkr_A 35 VDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYH 114 (309)
T ss_dssp HHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCB
T ss_pred HHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 45677899999998776653211111 122334445555667899998755555555553 3347999999999976
Q ss_pred HhcccCCHHHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQMLRD 273 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~~ 273 (308)
.....-.++++.++++.+.+
T Consensus 115 ~~~~~~s~~~l~~~f~~va~ 134 (309)
T 3fkr_A 115 GATFRVPEAQIFEFYARVSD 134 (309)
T ss_dssp TTTBCCCHHHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHH
Confidence 21011245555555544433
No 279
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=95.56 E-value=0.069 Score=50.38 Aligned_cols=153 Identities=13% Similarity=-0.002 Sum_probs=92.0
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
..+++.+.+.+++..+.||+.+-+.+++|...... +.... +.. .+.. ....++ ........+.+
T Consensus 141 ~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~-----g~~~~-~~~---~~~~------~~~~p~-~~~~~~~~~~~ 204 (418)
T 3r4e_A 141 GSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAY-----GVGRG-KLY---YEPA------DASLPS-VTGWDTRKALN 204 (418)
T ss_dssp ESSHHHHHHHHHHHHHTTCSEEEEEECCTTC---------------------------------CCCC-EEEECHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCccccccc-----ccccc-ccc---cccc------cccccc-cccccchhHHH
Confidence 45788888888888889999999999876420000 00000 000 0000 000000 00000000122
Q ss_pred cCHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeE
Q 021739 152 LNWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 152 ~~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipv 223 (308)
...+.++++|+.+ +++|.+... .+.++ ++.+.+.|+++|.= . . .+.++..+.++++.+ ++||
T Consensus 205 ~d~~~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEq---P---~--~~~d~~~~~~l~~~~--~iPI 274 (418)
T 3r4e_A 205 YVPKLFEELRKTYGFDHHLLHDGHHRYTPQEAANLGKMLEPYQLFWLED---C---T--PAENQEAFRLVRQHT--VTPL 274 (418)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEES---C---S--CCSSGGGGHHHHHHC--CSCE
T ss_pred HHHHHHHHHHHHcCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEEC---C---C--CccCHHHHHHHHhcC--CCCE
Confidence 3467799999986 688988754 45554 46677889998851 0 0 112345566776665 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 224 FLDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
++++.+.+..|+.++++.| +|.|++--
T Consensus 275 a~dE~~~~~~~~~~~l~~~a~d~v~~k~ 302 (418)
T 3r4e_A 275 AVGEIFNTIWDAKDLIQNQLIDYIRATV 302 (418)
T ss_dssp EECTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred EEcCCcCCHHHHHHHHHcCCCCeEecCc
Confidence 9999999999999999987 89998764
No 280
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=95.55 E-value=0.11 Score=48.56 Aligned_cols=88 Identities=9% Similarity=-0.058 Sum_probs=66.2
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--C-CHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeE
Q 021739 153 NWKDVKWLQTIT--SLPILVKGV--L-TAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~--~-~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipv 223 (308)
..+.++++|+.+ +.+|.+... . +.++ ++.+.+.|+++|.= . . .+.++..+.++++.+ ++||
T Consensus 186 d~~~v~avR~a~G~d~~l~vDan~~~~~~~~A~~~~~~L~~~~i~~iEe---P---~--~~~~~~~~~~l~~~~--~iPI 255 (394)
T 3mqt_A 186 IVAYLRELREVIGWDMDMMVDCLYRWTDWQKARWTFRQLEDIDLYFIEA---C---L--QHDDLIGHQKLAAAI--NTRL 255 (394)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCCSCHHHHHHHHHHTGGGCCSEEES---C---S--CTTCHHHHHHHHHHS--SSEE
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHHHHHhhcCCeEEEC---C---C--CcccHHHHHHHHhhC--CCCE
Confidence 357789999886 688988754 4 6655 45666789988851 0 0 122567777887766 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 224 FLDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
++++.+.+..|+.++++.| +|.|++--
T Consensus 256 a~dE~~~~~~~~~~~l~~~~~d~v~~k~ 283 (394)
T 3mqt_A 256 CGAEMSTTRFEAQEWLEKTGISVVQSDY 283 (394)
T ss_dssp EECTTCCHHHHHHHHHHHHCCSEECCCT
T ss_pred EeCCCcCCHHHHHHHHHcCCCCeEecCc
Confidence 9999999999999999976 89998753
No 281
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=95.55 E-value=0.097 Score=49.64 Aligned_cols=118 Identities=17% Similarity=0.173 Sum_probs=83.6
Q ss_pred CchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccC
Q 021739 74 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 153 (308)
Q Consensus 74 d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 153 (308)
+++.+.+.++++.+.||+.+-++++.+ ....
T Consensus 198 ~~e~~~~~a~~~~~~Gf~~vKik~g~~-------------------------------------------------~~~d 228 (441)
T 2hxt_A 198 SDEKLVRLAKEAVADGFRTIKLKVGAN-------------------------------------------------VQDD 228 (441)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSC-------------------------------------------------HHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCC-------------------------------------------------HHHH
Confidence 677777777888889999998875421 1122
Q ss_pred HHHHHHHHHhc--CCCEEEEec--CCHHHH----HHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEE
Q 021739 154 WKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 225 (308)
Q Consensus 154 ~~~i~~ir~~~--~~Pv~vK~~--~~~e~a----~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia 225 (308)
.+.++.+|+.+ +++|.+... .+.+++ +.+.+.|+++|.= . . .+..+..+.++++.+. .+||++
T Consensus 229 ~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq---P---~--~~~d~~~~~~l~~~~~-~iPIa~ 299 (441)
T 2hxt_A 229 IRRCRLARAAIGPDIAMAVDANQRWDVGPAIDWMRQLAEFDIAWIEE---P---T--SPDDVLGHAAIRQGIT-PVPVST 299 (441)
T ss_dssp HHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHTTGGGCCSCEEC---C---S--CTTCHHHHHHHHHHHT-TSCEEE
T ss_pred HHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCeeeC---C---C--CHHHHHHHHHHHhhCC-CCCEEE
Confidence 46788888875 578887643 455554 4455678887741 0 0 1235667777776652 599999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEc
Q 021739 226 DGGVRRGTDVFKALALG-ASGVFVG 249 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~G-Ad~V~ig 249 (308)
++.+.+..++.+++..| +|.|++-
T Consensus 300 dE~~~~~~~~~~~i~~~~~d~v~ik 324 (441)
T 2hxt_A 300 GEHTQNRVVFKQLLQAGAVDLIQID 324 (441)
T ss_dssp CTTCCSHHHHHHHHHHTCCSEECCC
T ss_pred eCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 99999999999999987 8999884
No 282
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=95.53 E-value=0.051 Score=48.87 Aligned_cols=92 Identities=21% Similarity=0.296 Sum_probs=57.3
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+++|||+.-|=.+..++++ +-.+|||++++-.|.+
T Consensus 27 v~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 106 (297)
T 2rfg_A 27 VDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYY 106 (297)
T ss_dssp HHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTT
T ss_pred HHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 46677899999998776553211111 122334445555666899887666555555553 3347999999999988
Q ss_pred HhcccCCHHHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQMLRD 273 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~~ 273 (308)
+.. .++++.++++.+.+
T Consensus 107 ~~~---s~~~l~~~f~~va~ 123 (297)
T 2rfg_A 107 NRP---SQEGLYQHFKMVHD 123 (297)
T ss_dssp TCC---CHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHH
Confidence 642 45555555555443
No 283
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=95.50 E-value=0.36 Score=43.96 Aligned_cols=117 Identities=19% Similarity=0.171 Sum_probs=82.7
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
.+++.+.+.++++.+.|++.+-+.+++ +++.
T Consensus 138 ~~~~~~~~~a~~~~~~Gf~~iKik~g~-------------------------------------------------~~~~ 168 (345)
T 2zad_A 138 DTVENRVKEAKKIFEEGFRVIKIKVGE-------------------------------------------------NLKE 168 (345)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCS-------------------------------------------------CHHH
T ss_pred CCHHHHHHHHHHHHHcCcCEEEEeecC-------------------------------------------------CHHH
Confidence 467777777777788999998876542 0111
Q ss_pred CHHHHHHHHHhc-CCCEEEEec--CCHHH----HHHHHHcCCc--EEEEecccccCCCCCcchHHHHHHHHHHccCCCeE
Q 021739 153 NWKDVKWLQTIT-SLPILVKGV--LTAED----ASLAIQYGAA--GIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 153 ~~~~i~~ir~~~-~~Pv~vK~~--~~~e~----a~~~~~~G~d--~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipv 223 (308)
..+.++++|+.- ++++.+-.. .+.++ ++.+.+.|++ +|. +. ..+..++.+.++++.+ ++||
T Consensus 169 d~~~v~avr~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~~~iE-------~P-~~~~~~~~~~~l~~~~--~ipi 238 (345)
T 2zad_A 169 DIEAVEEIAKVTRGAKYIVDANMGYTQKEAVEFARAVYQKGIDIAVYE-------QP-VRREDIEGLKFVRFHS--PFPV 238 (345)
T ss_dssp HHHHHHHHHHHSTTCEEEEECTTCSCHHHHHHHHHHHHHTTCCCSEEE-------CC-SCTTCHHHHHHHHHHS--SSCE
T ss_pred HHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCeeeee-------CC-CCcccHHHHHHHHHhC--CCCE
Confidence 246678888762 466666432 34444 5677888999 774 10 0123567777777766 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEE
Q 021739 224 FLDGGVRRGTDVFKALALG-ASGVFV 248 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~G-Ad~V~i 248 (308)
++++.+.+..|+.+++..| +|.|++
T Consensus 239 a~dE~~~~~~~~~~~i~~~~~d~v~i 264 (345)
T 2zad_A 239 AADESARTKFDVMRLVKEEAVDYVNI 264 (345)
T ss_dssp EESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred EEeCCcCCHHHHHHHHHhCCCCEEEE
Confidence 9999999999999999987 899999
No 284
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=95.50 E-value=0.13 Score=47.53 Aligned_cols=119 Identities=15% Similarity=0.227 Sum_probs=83.2
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
.+++.+.+.+++..+.|++.+-+.+++. ++.
T Consensus 139 ~~~e~~~~~a~~~~~~G~~~~K~KvG~~-------------------------------------------------~~~ 169 (368)
T 3q45_A 139 DEPHKMAADAVQIKKNGFEIIKVKVGGS-------------------------------------------------KEL 169 (368)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSC-------------------------------------------------HHH
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEecCC-------------------------------------------------HHH
Confidence 4677777777777778999887765321 112
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEE
Q 021739 153 NWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 224 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvi 224 (308)
..+.++++|+.+ ++++.+... .+.++ ++.+.+.|+++|.= . . .+..+..+.++++.+ .+||+
T Consensus 170 d~~~v~avR~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEq---P---~--~~~~~~~~~~l~~~~--~iPIa 239 (368)
T 3q45_A 170 DVERIRMIREAAGDSITLRIDANQGWSVETAIETLTLLEPYNIQHCEE---P---V--SRNLYTALPKIRQAC--RIPIM 239 (368)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCBCHHHHHHHHHHHGGGCCSCEEC---C---B--CGGGGGGHHHHHHTC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCChHHHHHHHHHHhhcCCCEEEC---C---C--ChhHHHHHHHHHhhC--CCCEE
Confidence 346788999886 678888743 45554 45667788888851 0 0 112345566776655 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 225 LDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 225 a~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
+++.+.+..|+.+++..| +|.|++--
T Consensus 240 ~dE~~~~~~~~~~~~~~~~~d~v~~k~ 266 (368)
T 3q45_A 240 ADESCCNSFDAERLIQIQACDSFNLKL 266 (368)
T ss_dssp ESTTCCSHHHHHHHHHTTCCSEEEECT
T ss_pred EcCCcCCHHHHHHHHHcCCCCeEEech
Confidence 999999999999999976 89998764
No 285
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=95.50 E-value=0.099 Score=48.85 Aligned_cols=86 Identities=13% Similarity=0.027 Sum_probs=64.9
Q ss_pred HHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcch-HHHHHHHHHHccCCCeEE
Q 021739 154 WKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPAT-VMALEEVVQAAKGRVPVF 224 (308)
Q Consensus 154 ~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipvi 224 (308)
.+.++++|+.+ ++++.+... .+.++ ++.+.+.|+++|.= . . .+.. ++.+.++++.+ .+||+
T Consensus 186 ~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe---P---~--~~~d~~~~~~~l~~~~--~iPIa 255 (392)
T 3ddm_A 186 VRNALHVRELLGAATPLMADANQGWDLPRARQMAQRLGPAQLDWLEE---P---L--RADRPAAEWAELAQAA--PMPLA 255 (392)
T ss_dssp HHHHHHHHHHHCSSSCEEEECTTCCCHHHHHHHHHHHGGGCCSEEEC---C---S--CTTSCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHhcCCCceEEEeCCCCCCHHHHHHHHHHHHHhCCCEEEC---C---C--CccchHHHHHHHHHhc--CCCEE
Confidence 56789999985 688988754 45554 46677789998851 0 0 1224 67777887765 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEc
Q 021739 225 LDGGVRRGTDVFKALALG-ASGVFVG 249 (308)
Q Consensus 225 a~GGI~~~~d~~k~l~~G-Ad~V~ig 249 (308)
+++.+.+..|+.++++.| +|.|++-
T Consensus 256 ~dE~~~~~~~~~~~i~~~a~d~v~~k 281 (392)
T 3ddm_A 256 GGENIAGVAAFETALAARSLRVMQPD 281 (392)
T ss_dssp ECTTCCSHHHHHHHHHHTCEEEECCC
T ss_pred eCCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 999999999999999977 7888874
No 286
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=95.49 E-value=0.22 Score=42.62 Aligned_cols=126 Identities=11% Similarity=0.010 Sum_probs=79.9
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEec-CCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTV-DTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDR 150 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~-~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 150 (308)
..|...+.+.++.+.+.|++.+.+.+ |.+.. | ..
T Consensus 15 a~d~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv-------------~--------------------------------~~ 49 (228)
T 1h1y_A 15 SSDFANLAAEADRMVRLGADWLHMDIMDGHFV-------------P--------------------------------NL 49 (228)
T ss_dssp GSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSS-------------S--------------------------------CB
T ss_pred eCCHHHHHHHHHHHHHcCCCEEEEEEecCCcC-------------c--------------------------------ch
Confidence 45777788889999999999876553 21100 0 01
Q ss_pred ccCHHHHHHHHHhcCCCEEEEec-CC-HHHHHHHHHcCCcEEEEecccccCCCCCcch-HHHHHHHHHHccCCCeEEEec
Q 021739 151 SLNWKDVKWLQTITSLPILVKGV-LT-AEDASLAIQYGAAGIIVSNHGARQLDYVPAT-VMALEEVVQAAKGRVPVFLDG 227 (308)
Q Consensus 151 ~~~~~~i~~ir~~~~~Pv~vK~~-~~-~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipvia~G 227 (308)
.+..+.++++|+.++.|+.+... .+ .+.++.+.++|+|+|+++.... ... ...+..+++. .+.++.+=
T Consensus 50 ~~~~~~~~~lr~~~~~~~~v~lmv~d~~~~i~~~~~agad~v~vH~~~~------~~~~~~~~~~i~~~---g~~igv~~ 120 (228)
T 1h1y_A 50 TIGAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIEVS------RDNWQELIQSIKAK---GMRPGVSL 120 (228)
T ss_dssp CBCHHHHHHHHTTCCSEEEEEEESSCGGGGHHHHHHHTCSEEEEEGGGC------TTTHHHHHHHHHHT---TCEEEEEE
T ss_pred hhCHHHHHHHHhhcCCcEEEEEEecCHHHHHHHHHHcCCCEEEECCCCc------ccHHHHHHHHHHHc---CCCEEEEE
Confidence 22357889999887777775443 23 2358888889999999865321 112 3334444332 45566555
Q ss_pred CCCCHHHHHHHHHc---CCCEEEEchH
Q 021739 228 GVRRGTDVFKALAL---GASGVFVGRP 251 (308)
Q Consensus 228 GI~~~~d~~k~l~~---GAd~V~ig~~ 251 (308)
.-.++.+..+.+.. ++|.|.+++.
T Consensus 121 ~p~t~~e~~~~~~~~~~~~d~vl~~sv 147 (228)
T 1h1y_A 121 RPGTPVEEVFPLVEAENPVELVLVMTV 147 (228)
T ss_dssp CTTSCGGGGHHHHHSSSCCSEEEEESS
T ss_pred eCCCCHHHHHHHHhcCCCCCEEEEEee
Confidence 55676666666665 9999999763
No 287
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=95.48 E-value=0.05 Score=48.80 Aligned_cols=90 Identities=13% Similarity=0.221 Sum_probs=55.8
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHH----HcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKAL----ALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l----~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+++|||+.-|=.+..++++.. .+|||++++-.|.+
T Consensus 28 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 107 (292)
T 2ojp_A 28 IDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYY 107 (292)
T ss_dssp HHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 45677889999998776653211111 12233444555566689998766665666666433 36999999999987
Q ss_pred HhcccCCHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQML 271 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l 271 (308)
+.. .++++.++++.+
T Consensus 108 ~~~---s~~~l~~~f~~i 122 (292)
T 2ojp_A 108 NRP---SQEGLYQHFKAI 122 (292)
T ss_dssp SCC---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 642 444444444433
No 288
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=95.47 E-value=0.12 Score=48.23 Aligned_cols=88 Identities=8% Similarity=-0.080 Sum_probs=66.2
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--C-CHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeE
Q 021739 153 NWKDVKWLQTIT--SLPILVKGV--L-TAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~--~-~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipv 223 (308)
..+.++++|+.+ +++|.+... . +.++ ++.+.+.|+++|.= . . .+.++..+.++++.+ ++||
T Consensus 191 d~e~v~avR~a~G~d~~l~vDaN~~~~~~~~A~~~~~~L~~~~i~~iEe---P---~--~~~d~~~~~~l~~~~--~iPI 260 (394)
T 3mkc_A 191 VAYYLRELRGILGHDTDMMVDYLYRFTDWYEVARLLNSIEDLELYFAEA---T---L--QHDDLSGHAKLVENT--RSRI 260 (394)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCCCCHHHHHHHHHHTGGGCCSEEES---C---S--CTTCHHHHHHHHHHC--SSCB
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCCCCCCHHHHHHHHHHhhhcCCeEEEC---C---C--CchhHHHHHHHHhhC--CCCE
Confidence 357789999886 688888754 4 6655 45666789888851 0 0 122567777887766 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 224 FLDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
++++.+.+..|+.++++.| +|.|++--
T Consensus 261 a~dE~~~~~~~~~~~l~~~~~d~v~~k~ 288 (394)
T 3mkc_A 261 CGAEMSTTRFEAEEWITKGKVHLLQSDY 288 (394)
T ss_dssp EECTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred EeCCCCCCHHHHHHHHHcCCCCeEecCc
Confidence 9999999999999999987 89998853
No 289
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=95.46 E-value=0.063 Score=48.34 Aligned_cols=91 Identities=16% Similarity=0.235 Sum_probs=57.5
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccC-CCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKG-RVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPV 252 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~-~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~ 252 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+ ++|||+.-|=.+..++++ +-.+|||++++-.|.
T Consensus 34 v~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 113 (301)
T 3m5v_A 34 IKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPY 113 (301)
T ss_dssp HHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 45677899999998776553211111 122334555566667 899998666566666664 334899999999998
Q ss_pred HHhcccCCHHHHHHHHHHHH
Q 021739 253 PFSLAVDGEAGVRKVLQMLR 272 (308)
Q Consensus 253 l~~~~~~G~~~v~~~i~~l~ 272 (308)
++.. .++++.++++.+.
T Consensus 114 y~~~---s~~~l~~~f~~va 130 (301)
T 3m5v_A 114 YNKP---TQQGLYEHYKAIA 130 (301)
T ss_dssp SSCC---CHHHHHHHHHHHH
T ss_pred CCCC---CHHHHHHHHHHHH
Confidence 8642 3455544444443
No 290
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=95.46 E-value=0.061 Score=48.30 Aligned_cols=94 Identities=14% Similarity=0.129 Sum_probs=58.6
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+++|||+.-|=.+..++++ +-.+|||++++-.|++
T Consensus 30 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 109 (294)
T 3b4u_A 30 ARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPPSY 109 (294)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCCcC
Confidence 45677889999998776653211111 112334444555556799987666555566553 3347999999999988
Q ss_pred HhcccCCHHHHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQMLRDE 274 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~~~ 274 (308)
+. .-.++++.++++.+.+.
T Consensus 110 ~~--~~s~~~l~~~f~~va~a 128 (294)
T 3b4u_A 110 FK--NVSDDGLFAWFSAVFSK 128 (294)
T ss_dssp SC--SCCHHHHHHHHHHHHHH
T ss_pred CC--CCCHHHHHHHHHHHHHh
Confidence 64 02456666666665544
No 291
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=95.45 E-value=0.086 Score=44.55 Aligned_cols=80 Identities=18% Similarity=0.184 Sum_probs=56.9
Q ss_pred HHHHHHHHHhcCCCEEEE--ecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCC
Q 021739 154 WKDVKWLQTITSLPILVK--GVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR 231 (308)
Q Consensus 154 ~~~i~~ir~~~~~Pv~vK--~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~ 231 (308)
.+.++++++.++.|++++ .+.+.+.++.+.++|+|+|.+.. .....+ +..+.+ ..+++.. ++|
T Consensus 46 ~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~~~----------~~~~~~-~~~~~~--g~~~~~g--~~t 110 (212)
T 2v82_A 46 EQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVTPN----------IHSEVI-RRAVGY--GMTVCPG--CAT 110 (212)
T ss_dssp HHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEEECSS----------CCHHHH-HHHHHT--TCEEECE--ECS
T ss_pred HHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEEEeCC----------CCHHHH-HHHHHc--CCCEEee--cCC
Confidence 466788887778888874 34678889999999999996321 112223 223333 4555543 899
Q ss_pred HHHHHHHHHcCCCEEEE
Q 021739 232 GTDVFKALALGASGVFV 248 (308)
Q Consensus 232 ~~d~~k~l~~GAd~V~i 248 (308)
+.++.++...|+|.|.+
T Consensus 111 ~~e~~~a~~~G~d~v~v 127 (212)
T 2v82_A 111 ATEAFTALEAGAQALKI 127 (212)
T ss_dssp HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHCCCCEEEE
Confidence 99999999999999986
No 292
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=95.42 E-value=0.17 Score=46.68 Aligned_cols=88 Identities=13% Similarity=0.002 Sum_probs=65.2
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--CCHH----HHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEE
Q 021739 153 NWKDVKWLQTIT--SLPILVKGV--LTAE----DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 224 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~--~~~e----~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvi 224 (308)
..+.++++|+.+ ++++.+... .+.+ .++.+.+.|+++|. +. ..+..+..+.++++.+ .+||+
T Consensus 174 d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~~~~~~~~l~~~~--~iPia 243 (370)
T 1chr_A 174 DLIHMEALSNSLGSKAYLRVDVNQAWDEQVASVYIPELEALGVELIE-------QP-VGRENTQALRRLSDNN--RVAIM 243 (370)
T ss_dssp HHHHHHHHHHHSSTTCCEEEECTTCCCTTHHHHHTHHHHTTTEEEEE-------CC-SCTTCHHHHHHHHHHS--CSEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------CC-CCcccHHHHHHHHhhC--CCCEE
Confidence 356789999986 478988854 3333 35677788888875 10 0123466777787765 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 225 LDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 225 a~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
+++.+.+..|+.+++..| +|.|++--
T Consensus 244 ~dE~~~~~~~~~~~~~~~~~d~v~~k~ 270 (370)
T 1chr_A 244 ADESLSTLASAFDLARDRSVDVFSLKL 270 (370)
T ss_dssp ESSSCCSHHHHHHHHTTTSCSEEEECT
T ss_pred eCCCcCCHHHHHHHHHcCCCCEEEECc
Confidence 999999999999999986 89999854
No 293
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=95.39 E-value=0.033 Score=49.25 Aligned_cols=42 Identities=21% Similarity=0.463 Sum_probs=36.5
Q ss_pred CHHHHHHHHHhcCCCEEEEec-CCHHHHHHHHHcCCcEEEEec
Q 021739 153 NWKDVKWLQTITSLPILVKGV-LTAEDASLAIQYGAAGIIVSN 194 (308)
Q Consensus 153 ~~~~i~~ir~~~~~Pv~vK~~-~~~e~a~~~~~~G~d~i~v~~ 194 (308)
.++.++++++..++||++... .+++++..+.++|+|+|.+..
T Consensus 166 ~~~~l~~i~~~~~iPviv~gGI~t~eda~~~~~~GAdgViVGS 208 (264)
T 1xm3_A 166 NPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGADGVLLNT 208 (264)
T ss_dssp CHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHTTCSEEEESH
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHcCCCEEEEcH
Confidence 377899999988999999854 579999999999999999854
No 294
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=95.39 E-value=0.056 Score=48.85 Aligned_cols=90 Identities=19% Similarity=0.315 Sum_probs=55.8
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+.+.+++|||+.-|=.+..++++ +-++|||++++-.|++
T Consensus 39 v~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y 118 (306)
T 1o5k_A 39 VRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYY 118 (306)
T ss_dssp HHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 46677899999998776654211111 122334455555666899987666556566553 3347999999999987
Q ss_pred HhcccCCHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQML 271 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l 271 (308)
+.. .++++.++++.+
T Consensus 119 ~~~---s~~~l~~~f~~v 133 (306)
T 1o5k_A 119 NKP---TQEGLYQHYKYI 133 (306)
T ss_dssp SCC---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 642 344444444433
No 295
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=95.39 E-value=0.12 Score=48.30 Aligned_cols=144 Identities=17% Similarity=0.009 Sum_probs=90.6
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
..+++.+.+.+++..+.||+.+-+.++++.... +. .|. . .....+ ..+....+.+
T Consensus 131 ~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~---~~-----~~~---~------------~~~~~g--~~~~~~~~~~ 185 (401)
T 3sbf_A 131 SDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVP---TD-----LHT---T------------QNPTEG--SYYDQDQYMD 185 (401)
T ss_dssp ESSHHHHHHHHHHHHHTTCCEEEEEESCCCSCG---GG-----SCC---C------------SSCCSS--EECCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeeccCCccc---cc-----ccc---c------------cccccc--ccccchHHHH
Confidence 457788888888887899999999887542100 00 000 0 000000 0000001123
Q ss_pred cCHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeE
Q 021739 152 LNWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 152 ~~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipv 223 (308)
...+.++++|+.+ +++|.+... .+.++ ++.+.+.|+++|.= . . .+.++..+.++++.+ ++||
T Consensus 186 ~d~~~v~avR~a~G~d~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iEq---P---~--~~~~~~~~~~l~~~~--~iPI 255 (401)
T 3sbf_A 186 NTLTMFKSLREKYGNQFHILHDVHERLFPNQAIQFAKEVEQYKPYFIED---I---L--PPNQTEWLDNIRSQS--SVSL 255 (401)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEECTTCSCHHHHHHHHHHHGGGCCSCEEC---S---S--CTTCGGGHHHHHTTC--CCCE
T ss_pred HHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC---C---C--ChhHHHHHHHHHhhC--CCCE
Confidence 3467799999986 688988854 45555 46667788888851 0 0 112345566666554 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 224 FLDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
++++.+.+..|+.++++.| +|.|++--
T Consensus 256 a~dE~~~~~~~~~~~i~~~~~d~v~~k~ 283 (401)
T 3sbf_A 256 GLGELFNNPEEWKSLIANRRIDFIRCHV 283 (401)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECCCG
T ss_pred EeCCccCCHHHHHHHHhcCCCCEEecCc
Confidence 9999999999999999987 89988764
No 296
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=95.33 E-value=0.23 Score=41.63 Aligned_cols=41 Identities=24% Similarity=0.415 Sum_probs=36.9
Q ss_pred HHHHHHHHhcCCCEEEEec-CCHHHHHHHHHcCCcEEEEecc
Q 021739 155 KDVKWLQTITSLPILVKGV-LTAEDASLAIQYGAAGIIVSNH 195 (308)
Q Consensus 155 ~~i~~ir~~~~~Pv~vK~~-~~~e~a~~~~~~G~d~i~v~~~ 195 (308)
+.++++++.+++||++.+- .+.|++..+.++||++|+.++.
T Consensus 140 ~iI~~i~~~~~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~ 181 (192)
T 3kts_A 140 EQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNK 181 (192)
T ss_dssp HHHHHHHHHHCCCEEEESSCCSHHHHHHHHTTTEEEEEECCG
T ss_pred HHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCeEEEeCCH
Confidence 6889999999999999975 6899999999999999998763
No 297
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=95.32 E-value=0.041 Score=49.96 Aligned_cols=92 Identities=16% Similarity=0.178 Sum_probs=59.4
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+++|||+.-|- +..++++ +-.+|||++++-.|++
T Consensus 39 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~-~t~~ai~la~~A~~~Gadavlv~~P~y 117 (316)
T 3e96_A 39 VDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGY-ATSTAIELGNAAKAAGADAVMIHMPIH 117 (316)
T ss_dssp HHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHHHHHTCSEEEECCCCC
T ss_pred HHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCc-CHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 45677899999988766553211111 1223345555566678999988774 7777664 3347999999999987
Q ss_pred HhcccCCHHHHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQMLRDE 274 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~~~ 274 (308)
.. -.++++.++++.+.+.
T Consensus 118 ~~---~s~~~l~~~f~~va~a 135 (316)
T 3e96_A 118 PY---VTAGGVYAYFRDIIEA 135 (316)
T ss_dssp SC---CCHHHHHHHHHHHHHH
T ss_pred CC---CCHHHHHHHHHHHHHh
Confidence 53 2566666666665554
No 298
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=95.30 E-value=0.11 Score=47.74 Aligned_cols=121 Identities=13% Similarity=0.092 Sum_probs=85.4
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
.+++.+.+.+++..+.|++.+-+.+++. ++.
T Consensus 139 ~~~~~~~~~a~~~~~~G~~~~K~K~G~~-------------------------------------------------~~~ 169 (356)
T 3ro6_B 139 KPVEETLAEAREHLALGFRVLKVKLCGD-------------------------------------------------EEQ 169 (356)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCSC-------------------------------------------------HHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeCCC-------------------------------------------------HHH
Confidence 4677777777777778999987776431 112
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEE
Q 021739 153 NWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 224 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvi 224 (308)
..+.++++|+.+ ++++.+... .+.++ ++.+.+.|+++|. +. ..+.++..+.++++.+ ++||+
T Consensus 170 d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPIa 239 (356)
T 3ro6_B 170 DFERLRRLHETLAGRAVVRVDPNQSYDRDGLLRLDRLVQELGIEFIE-------QP-FPAGRTDWLRALPKAI--RRRIA 239 (356)
T ss_dssp HHHHHHHHHHHHTTSSEEEEECTTCCCHHHHHHHHHHHHHTTCCCEE-------CC-SCTTCHHHHHTSCHHH--HHTEE
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCEEE-------CC-CCCCcHHHHHHHHhcC--CCCEE
Confidence 246788898885 678888754 45544 5677788998885 10 0122466666665554 68999
Q ss_pred EecCCCCHHHHHHHHHcC--CCEEEEchHH
Q 021739 225 LDGGVRRGTDVFKALALG--ASGVFVGRPV 252 (308)
Q Consensus 225 a~GGI~~~~d~~k~l~~G--Ad~V~ig~~~ 252 (308)
+++.+.+..|+.+++..| +|.|++--..
T Consensus 240 ~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~ 269 (356)
T 3ro6_B 240 ADESLLGPADAFALAAPPAACGIFNIKLMK 269 (356)
T ss_dssp ESTTCCSHHHHHHHHSSSCSCSEEEECHHH
T ss_pred eCCcCCCHHHHHHHHhcCCcCCEEEEcccc
Confidence 999999999999999875 8999986543
No 299
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=95.29 E-value=0.062 Score=49.39 Aligned_cols=90 Identities=19% Similarity=0.294 Sum_probs=56.0
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+.+.+++|||+.-|=.+..++++ +-.+|||++++-.|++
T Consensus 58 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y 137 (343)
T 2v9d_A 58 IDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYY 137 (343)
T ss_dssp HHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECCSS
T ss_pred HHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 46677899999998776653211111 122334445555666899987666555566553 3347999999999987
Q ss_pred HhcccCCHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQML 271 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l 271 (308)
+.. .++++.++++.+
T Consensus 138 ~~~---s~~~l~~~f~~V 152 (343)
T 2v9d_A 138 WKV---SEANLIRYFEQV 152 (343)
T ss_dssp SCC---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 642 445554444443
No 300
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=95.27 E-value=0.082 Score=48.03 Aligned_cols=92 Identities=14% Similarity=0.203 Sum_probs=54.7
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHHH----HHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKA----LALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~----l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+++|||+.-|=.+..++++. -.+|||++++-.|++
T Consensus 38 v~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 117 (318)
T 3qfe_A 38 YAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAY 117 (318)
T ss_dssp HHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC
T ss_pred HHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 45677889999998877653211111 1223344455566678999986665566665543 347999999999976
Q ss_pred HhcccCCHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQML 271 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l 271 (308)
+.- -..++++.++++.+
T Consensus 118 ~~k-p~~~~~l~~~f~~i 134 (318)
T 3qfe_A 118 FGK-ATTPPVIKSFFDDV 134 (318)
T ss_dssp ----CCCHHHHHHHHHHH
T ss_pred cCC-CCCHHHHHHHHHHH
Confidence 530 01344444444443
No 301
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=95.27 E-value=0.067 Score=47.52 Aligned_cols=41 Identities=27% Similarity=0.251 Sum_probs=35.4
Q ss_pred HHHHHHHHHhcCCCEEEEec-CCHHHHHHHHHcCCcEEEEec
Q 021739 154 WKDVKWLQTITSLPILVKGV-LTAEDASLAIQYGAAGIIVSN 194 (308)
Q Consensus 154 ~~~i~~ir~~~~~Pv~vK~~-~~~e~a~~~~~~G~d~i~v~~ 194 (308)
.+.++++|+.+++|+.+... .++++++.+.+.|+|++++..
T Consensus 197 ~~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~~~gADgvIVGS 238 (271)
T 3nav_A 197 HALLERLQQFDAPPALLGFGISEPAQVKQAIEAGAAGAISGS 238 (271)
T ss_dssp HHHHHHHHHTTCCCEEECSSCCSHHHHHHHHHTTCSEEEESH
T ss_pred HHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEECH
Confidence 46799999988999999865 579999989999999999853
No 302
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=95.27 E-value=0.15 Score=45.22 Aligned_cols=71 Identities=18% Similarity=0.112 Sum_probs=54.5
Q ss_pred HHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHH
Q 021739 177 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVP 253 (308)
Q Consensus 177 e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l 253 (308)
+.|+...+.||++|.+-.-.+ +.....+.+..+++.+ ++||+.-+.|.+..++..+.++|||+|.++.+.+
T Consensus 76 ~~A~~y~~~GA~~isvltd~~----~f~Gs~~~l~~ir~~v--~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l 146 (272)
T 3qja_A 76 KLAQAYQDGGARIVSVVTEQR----RFQGSLDDLDAVRASV--SIPVLRKDFVVQPYQIHEARAHGADMLLLIVAAL 146 (272)
T ss_dssp HHHHHHHHTTCSEEEEECCGG----GHHHHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGS
T ss_pred HHHHHHHHcCCCEEEEecChh----hcCCCHHHHHHHHHhC--CCCEEECccccCHHHHHHHHHcCCCEEEEecccC
Confidence 568888899999998743111 0011356677777766 7999999999999999999999999999986654
No 303
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=95.25 E-value=0.41 Score=44.72 Aligned_cols=87 Identities=11% Similarity=0.012 Sum_probs=64.9
Q ss_pred HHHHHHHHHhc--CCCEEEEec--CC---HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEe
Q 021739 154 WKDVKWLQTIT--SLPILVKGV--LT---AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLD 226 (308)
Q Consensus 154 ~~~i~~ir~~~--~~Pv~vK~~--~~---~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~ 226 (308)
.+.++++|+.+ +++|.+... .+ .+.++.+.+.|+++|. +. -.+..+..+.++++.+ .+||+++
T Consensus 192 ~~~v~avR~a~G~~~~L~vDaN~~w~~~~~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPIa~d 261 (400)
T 3mwc_A 192 VEPLQETRRAVGDHFPLWTDANSSFELDQWETFKAMDAAKCLFHE-------QP-LHYEALLDLKELGERI--ETPICLD 261 (400)
T ss_dssp HHHHHHHHHHHCTTSCEEEECTTCCCGGGHHHHHHHGGGCCSCEE-------SC-SCTTCHHHHHHHHHHS--SSCEEES
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCHHHHHHHHHHHhcCCCEEe-------CC-CChhhHHHHHHHHhhC--CCCEEEe
Confidence 56788898876 678888743 22 3456777788888874 10 0122467777777765 7999999
Q ss_pred cCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 227 GGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 227 GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
..+.+..|+.++++.| +|.|++--
T Consensus 262 E~~~~~~~~~~~~~~~~~d~v~~k~ 286 (400)
T 3mwc_A 262 ESLISSRVAEFVAKLGISNIWNIKI 286 (400)
T ss_dssp TTCCSHHHHHHHHHTTCCSEEEECH
T ss_pred CCcCCHHHHHHHHhcCCCCEEEEcc
Confidence 9999999999999987 89998864
No 304
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=95.24 E-value=0.029 Score=48.52 Aligned_cols=81 Identities=14% Similarity=0.137 Sum_probs=47.9
Q ss_pred HHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCH-HHHHHHHHcCCCEEEEchHHHHhc
Q 021739 178 DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRG-TDVFKALALGASGVFVGRPVPFSL 256 (308)
Q Consensus 178 ~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~-~d~~k~l~~GAd~V~ig~~~l~~~ 256 (308)
.++.+.+.|+|+++++.. ..+.+.++++..+.+.++ .+.||+-. .+. +++..|||.+.+||+++.+
T Consensus 142 ~a~~a~~~G~~GvV~~at----------~~~e~~~ir~~~~~~~~i-v~PGI~~~g~~p-~~~~aGad~iVvGr~I~~a- 208 (228)
T 3m47_A 142 IARMGVDLGVKNYVGPST----------RPERLSRLREIIGQDSFL-ISPGVGAQGGDP-GETLRFADAIIVGRSIYLA- 208 (228)
T ss_dssp HHHHHHHTTCCEEECCSS----------CHHHHHHHHHHHCSSSEE-EECC----------CGGGTCSEEEECHHHHTS-
T ss_pred HHHHHHHhCCcEEEECCC----------ChHHHHHHHHhcCCCCEE-EecCcCcCCCCH-hHHHcCCCEEEECHHHhCC-
Confidence 466778899999876431 234566666665444555 77888643 366 8889999999999997753
Q ss_pred ccCCHHHHHHHHHHHHHHHH
Q 021739 257 AVDGEAGVRKVLQMLRDEFE 276 (308)
Q Consensus 257 ~~~G~~~v~~~i~~l~~~l~ 276 (308)
..+ .+.++.++++++
T Consensus 209 --~dp---~~a~~~~~~~~~ 223 (228)
T 3m47_A 209 --DNP---AAAAAGAIESIK 223 (228)
T ss_dssp --SCH---HHHHHHHHHHC-
T ss_pred --CCH---HHHHHHHHHHHH
Confidence 223 234455555544
No 305
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=95.19 E-value=1.6 Score=38.95 Aligned_cols=181 Identities=10% Similarity=0.052 Sum_probs=108.5
Q ss_pred CceEeccccCcccCCCHHHHHHHHHHHHcCCceee-----cCCCCCCHHHHhc-------c-CCC-CceEEeeecCCchH
Q 021739 12 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL-----SSWATSSVEEVSS-------T-GPG-IRFFQLYVTKHRNV 77 (308)
Q Consensus 12 ~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~-----s~~~~~~~e~i~~-------~-~~~-~~~~Ql~~~~d~~~ 77 (308)
.|.++.||.-.+-.+.++-..+.+-..+.|+...+ +|..+.+.+|..+ . ... +.+.... ..+.+.
T Consensus 9 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 87 (300)
T 3eb2_A 9 FPYLVSPVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVA-STSVAD 87 (300)
T ss_dssp EEBCCCCBCTTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEE-ESSHHH
T ss_pred EEEEeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHH
Confidence 46678888644435555556677777788875544 2334566665332 1 222 6777776 556777
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHH
Q 021739 78 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 157 (308)
Q Consensus 78 ~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 157 (308)
..++.+.+++.|++++.+.. |... + .. ++- ..+..
T Consensus 88 ai~la~~a~~~Gadavlv~~--P~y~--------------~-------------------~~-~~~---------l~~~f 122 (300)
T 3eb2_A 88 AVAQAKLYEKLGADGILAIL--EAYF--------------P-------------------LK-DAQ---------IESYF 122 (300)
T ss_dssp HHHHHHHHHHHTCSEEEEEE--CCSS--------------C-------------------CC-HHH---------HHHHH
T ss_pred HHHHHHHHHHcCCCEEEEcC--CCCC--------------C-------------------CC-HHH---------HHHHH
Confidence 78888999999999987652 4320 0 00 111 13567
Q ss_pred HHHHHhcCCCEEEEec-------CCHHHHHHHHHcC-CcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCC
Q 021739 158 KWLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 229 (308)
Q Consensus 158 ~~ir~~~~~Pv~vK~~-------~~~e~a~~~~~~G-~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI 229 (308)
+.|.+.+++||++=.+ ++++...++.+.. +-+|.-+. .+...+.++.+...+++.|+. |.=
T Consensus 123 ~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKdss----------gd~~~~~~~~~~~~~~f~v~~-G~d 191 (300)
T 3eb2_A 123 RAIADAVEIPVVIYTNPQFQRSDLTLDVIARLAEHPRIRYIKDAS----------TNTGRLLSIINRCGDALQVFS-ASA 191 (300)
T ss_dssp HHHHHHCSSCEEEEECTTTCSSCCCHHHHHHHHTSTTEEEEEECS----------SBHHHHHHHHHHHGGGSEEEE-CTT
T ss_pred HHHHHHCCCCEEEEECccccCCCCCHHHHHHHHcCCCEEEEEcCC----------CCHHHHHHHHHHcCCCeEEEe-CcH
Confidence 7888888999987654 5678887776532 22222211 123444455444444555554 321
Q ss_pred CCHHHHHHHHHcCCCEEEEchHH
Q 021739 230 RRGTDVFKALALGASGVFVGRPV 252 (308)
Q Consensus 230 ~~~~d~~k~l~~GAd~V~ig~~~ 252 (308)
..+..++.+|++++.-+.+-
T Consensus 192 ---~~~~~~l~~G~~G~is~~an 211 (300)
T 3eb2_A 192 ---HIPAAVMLIGGVGWMAGPAC 211 (300)
T ss_dssp ---SCHHHHHHTTCCEEEEGGGG
T ss_pred ---HHHHHHHhCCCCEEEeChhh
Confidence 23567888999999888743
No 306
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=95.16 E-value=0.055 Score=48.50 Aligned_cols=92 Identities=20% Similarity=0.311 Sum_probs=55.8
Q ss_pred HHHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHH
Q 021739 178 DASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPV 252 (308)
Q Consensus 178 ~a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~ 252 (308)
.++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+++|||+.-|=.+..++.+ +-.+|||++++-.|+
T Consensus 26 lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 105 (292)
T 2vc6_A 26 LVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPY 105 (292)
T ss_dssp HHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 356678899999988766553211111 122334445555566899887655555555553 334799999999998
Q ss_pred HHhcccCCHHHHHHHHHHHH
Q 021739 253 PFSLAVDGEAGVRKVLQMLR 272 (308)
Q Consensus 253 l~~~~~~G~~~v~~~i~~l~ 272 (308)
++.. .++++.++++.+.
T Consensus 106 y~~~---s~~~l~~~f~~ia 122 (292)
T 2vc6_A 106 YNKP---TQEGIYQHFKAID 122 (292)
T ss_dssp SSCC---CHHHHHHHHHHHH
T ss_pred CCCC---CHHHHHHHHHHHH
Confidence 7642 4455554444443
No 307
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=95.15 E-value=0.23 Score=45.35 Aligned_cols=90 Identities=12% Similarity=0.101 Sum_probs=63.4
Q ss_pred CCceEEeee------cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCC
Q 021739 63 GIRFFQLYV------TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTD 136 (308)
Q Consensus 63 ~~~~~Ql~~------~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~ 136 (308)
-+.++-+.+ +.+.+...++++.+++.|++.|.++-+.... . ..
T Consensus 210 ~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~-------------~-~~----------------- 258 (338)
T 1z41_A 210 GPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVH-------------A-DI----------------- 258 (338)
T ss_dssp SCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSC-------------C-CC-----------------
T ss_pred CcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCcccc-------------C-CC-----------------
Confidence 366777664 2345677788899999999999887432100 0 00
Q ss_pred CchhhhHhhhhcccccCHHHHHHHHHhcCCCEEEEecC-CHHHHHHHHHcC-CcEEEEe
Q 021739 137 DSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL-TAEDASLAIQYG-AAGIIVS 193 (308)
Q Consensus 137 ~~~~~~~~~~~~d~~~~~~~i~~ir~~~~~Pv~vK~~~-~~e~a~~~~~~G-~d~i~v~ 193 (308)
. ..+...++.++++|+.+++||+.-+.. +++++..+.+.| +|+|.+.
T Consensus 259 -~---------~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iG 307 (338)
T 1z41_A 259 -N---------VFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIFIG 307 (338)
T ss_dssp -C---------CCTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEEEC
T ss_pred -C---------CCccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEeec
Confidence 0 012335678899999999999987665 899999999998 9999763
No 308
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=95.15 E-value=0.055 Score=49.10 Aligned_cols=91 Identities=18% Similarity=0.229 Sum_probs=55.8
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+++|||+.-|= +..++++ +-++|||++++-.|.+
T Consensus 39 v~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~-st~~ai~la~~A~~~Gadavlv~~P~y 117 (314)
T 3d0c_A 39 VEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGY-SVDTAIELGKSAIDSGADCVMIHQPVH 117 (314)
T ss_dssp HHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHHHHTTCSEEEECCCCC
T ss_pred HHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc-CHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 45677899999987666553211111 1223344555556668999865444 5555553 3347999999999987
Q ss_pred HhcccCCHHHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQMLRD 273 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~~ 273 (308)
+.. .++++.++++.+.+
T Consensus 118 ~~~---s~~~l~~~f~~va~ 134 (314)
T 3d0c_A 118 PYI---TDAGAVEYYRNIIE 134 (314)
T ss_dssp SCC---CHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHH
Confidence 642 45555555555443
No 309
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=95.12 E-value=0.15 Score=47.70 Aligned_cols=88 Identities=15% Similarity=0.096 Sum_probs=65.3
Q ss_pred cCHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeE
Q 021739 152 LNWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 152 ~~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipv 223 (308)
...+.++.+|+.+ +++|.+... .+.++ ++.+.+.|+++|.= . . .+..++.+.++++.+ ++||
T Consensus 195 ~~~e~v~avRea~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEe---P---~--~~~d~~~~~~l~~~~--~iPI 264 (410)
T 2qq6_A 195 AMVARVAAVREAVGPEVEVAIDMHGRFDIPSSIRFARAMEPFGLLWLEE---P---T--PPENLDALAEVRRST--STPI 264 (410)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEEC---C---S--CTTCHHHHHHHHTTC--SSCE
T ss_pred HHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCeEEC---C---C--ChhhHHHHHHHHhhC--CCCE
Confidence 3467899999976 688888753 45554 45667789998751 0 0 123467777776655 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEc
Q 021739 224 FLDGGVRRGTDVFKALALG-ASGVFVG 249 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~G-Ad~V~ig 249 (308)
++++.+.+..++.++++.| +|.|++-
T Consensus 265 a~dE~~~~~~~~~~~i~~~~~d~v~ik 291 (410)
T 2qq6_A 265 CAGENVYTRFDFRELFAKRAVDYVMPD 291 (410)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECCB
T ss_pred EeCCCcCCHHHHHHHHHcCCCCEEecC
Confidence 9999999999999999987 8999884
No 310
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=95.08 E-value=0.07 Score=49.48 Aligned_cols=103 Identities=18% Similarity=0.199 Sum_probs=66.5
Q ss_pred CceEEeeecCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhH
Q 021739 64 IRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASY 143 (308)
Q Consensus 64 ~~~~Ql~~~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~ 143 (308)
|.++.+-++.+.+.+.++++.++++|+++|.++=.+.. |.. ...|. . . ...+ -
T Consensus 222 Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~---r~~-----~~~~~-~-------------~----~~~g-G 274 (367)
T 3zwt_A 222 AVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVS---RPA-----GLQGA-L-------------R----SETG-G 274 (367)
T ss_dssp EEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSC---CCT-----TCCCT-T-------------T----TSSS-E
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcc---ccc-----ccccc-c-------------c----cccC-C
Confidence 77888876666778888999999999999887521110 000 00000 0 0 0000 0
Q ss_pred hhhhcccccCHHHHHHHHHhc--CCCEEEEe-cCCHHHHHHHHHcCCcEEEEe
Q 021739 144 VANQIDRSLNWKDVKWLQTIT--SLPILVKG-VLTAEDASLAIQYGAAGIIVS 193 (308)
Q Consensus 144 ~~~~~d~~~~~~~i~~ir~~~--~~Pv~vK~-~~~~e~a~~~~~~G~d~i~v~ 193 (308)
++.....+.+++.++++++.+ ++||+.-+ +.+.+++..+.++|||+|.+.
T Consensus 275 lSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vg 327 (367)
T 3zwt_A 275 LSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLY 327 (367)
T ss_dssp EEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred cCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 111112334678999999998 79987654 578999999999999999874
No 311
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=95.05 E-value=0.1 Score=47.13 Aligned_cols=94 Identities=13% Similarity=0.100 Sum_probs=57.2
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+++|||+.-|=.+..++++ +-++|||++++-.|.+
T Consensus 41 v~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 120 (307)
T 3s5o_A 41 LHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCY 120 (307)
T ss_dssp HHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCT
T ss_pred HHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCc
Confidence 35567889999999877653211111 122334445555566899988656556666553 3358999999999987
Q ss_pred HhcccCCHHHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQMLRD 273 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~~ 273 (308)
+.. .-.++++.++++.+.+
T Consensus 121 ~~~-~~s~~~l~~~f~~ia~ 139 (307)
T 3s5o_A 121 YRG-RMSSAALIHHYTKVAD 139 (307)
T ss_dssp TGG-GCCHHHHHHHHHHHHH
T ss_pred CCC-CCCHHHHHHHHHHHHh
Confidence 631 1135555555554433
No 312
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=95.05 E-value=0.25 Score=46.60 Aligned_cols=152 Identities=13% Similarity=0.032 Sum_probs=92.5
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCC-ccccccccccccccCCCCCCchhhhHhhhhccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPP-HLTLKNYEGLYIGKMDKTDDSGLASYVANQIDR 150 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 150 (308)
..+++.+.+.+++..+.||+.+-+.++.|..... +..+. +.. ... + ... ..+ ........+.
T Consensus 148 ~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~-------~g~~~~~~~---~~~-~----~~~-~p~-~~~~d~~~~~ 210 (425)
T 3vcn_A 148 GETIEDTIAEAVKYKAMGYKAIRLQTGVPGLAST-------YGVSKDKMF---YEP-A----DND-LPT-ENIWSTAKYL 210 (425)
T ss_dssp ESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCC-------TTCSSCSSC---CCC-C----CBS-SCC-EEEECHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeecCcccccc-------ccccccccc---cCc-c----ccc-ccc-cccccchhHH
Confidence 4577888888888888999999988876421000 00000 000 000 0 000 000 0000000012
Q ss_pred ccCHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCe
Q 021739 151 SLNWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVP 222 (308)
Q Consensus 151 ~~~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 222 (308)
+...+.++++|+.+ +++|.+... .+.++ ++.+.+.|+++|.-- . .+.++..+.++++.+ ++|
T Consensus 211 ~~d~e~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP------~--~~~d~~~~~~l~~~~--~iP 280 (425)
T 3vcn_A 211 NSVPKLFERAREVLGWDVHLLHDVHHRLTPIEAARLGKDLEPYRLFWLEDS------V--PAENQAGFRLIRQHT--TTP 280 (425)
T ss_dssp TTTHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECC------S--CCSSTTHHHHHHHHC--CSC
T ss_pred HHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECC------C--ChhhHHHHHHHHhcC--CCC
Confidence 34578899999986 688888754 45555 466778899988511 0 112455667777665 799
Q ss_pred EEEecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 223 VFLDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 223 via~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
|++++.+.+..|+.++++.| +|.|++--
T Consensus 281 Ia~dE~~~~~~~~~~~i~~~a~d~v~~k~ 309 (425)
T 3vcn_A 281 LAVGEIFAHVWDAKQLIEEQLIDYLRATV 309 (425)
T ss_dssp EEECTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred EEeCCCcCCHHHHHHHHHcCCCCeEecCh
Confidence 99999999999999999987 89988764
No 313
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=95.03 E-value=0.19 Score=47.45 Aligned_cols=144 Identities=16% Similarity=0.028 Sum_probs=91.1
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
..+++.+.+.+++..+.|++.+-+.++.+.... +. ...|... ..+ .......+.+
T Consensus 152 ~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~---~~---~~~~~~~-----------------~~~--~~~~~~~~~~ 206 (422)
T 3tji_A 152 GETLEALFASVDALIAQGYRHIRCQLGFYGGTP---SA---LHAPDNP-----------------TPG--AWFDQQEYMS 206 (422)
T ss_dssp ESSHHHHHHHHHHHHHTTCSEEEEEESCCCBCG---GG---SCCCSSC-----------------CSS--EECCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeeccCCccc---cc---ccccccc-----------------ccc--ccccchhHHH
Confidence 457787877788778899999998887532100 00 0000000 000 0000000122
Q ss_pred cCHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeE
Q 021739 152 LNWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 152 ~~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipv 223 (308)
...+.++++|+.+ +++|.+... .+.++ ++.+.+.|+++|.= . . .+.++..+.++++.+ ++||
T Consensus 207 ~d~e~v~avR~avG~d~~L~vDaN~~~~~~~A~~~~~~Le~~~i~~iEq---P---~--~~~d~~~~~~l~~~~--~iPI 276 (422)
T 3tji_A 207 NTVEMFHALREKYGWKLHILHDVHERLFPQQAVQLAKQLEPFQPYFIED---I---L--PPQQSAWLEQVRQQS--CVPL 276 (422)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEEC---C---S--CGGGGGGHHHHHHHC--CCCE
T ss_pred HHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCeEEC---C---C--ChhhHHHHHHHHhhC--CCCE
Confidence 3467799999986 688888754 45555 45667789888851 0 0 112455667777665 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 224 FLDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
++++.+.+..|+.++++.| +|.|++--
T Consensus 277 a~dE~~~~~~~~~~ll~~ga~d~v~~k~ 304 (422)
T 3tji_A 277 ALGELFNNPAEWHDLIVNRRIDFIRCHV 304 (422)
T ss_dssp EECTTCCSGGGTHHHHHTTCCSEECCCG
T ss_pred EEeCCcCCHHHHHHHHhcCCCCEEecCc
Confidence 9999999999999999987 89998754
No 314
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=95.01 E-value=0.38 Score=43.97 Aligned_cols=89 Identities=11% Similarity=0.135 Sum_probs=63.5
Q ss_pred CceEEeeec------CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCC
Q 021739 64 IRFFQLYVT------KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDD 137 (308)
Q Consensus 64 ~~~~Ql~~~------~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~ 137 (308)
+.++-|.+. .+.+...++++.+++.|++.|.++.+.... + ..
T Consensus 211 pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~-------------~-~~------------------ 258 (340)
T 3gr7_A 211 PLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVP-------------A-RM------------------ 258 (340)
T ss_dssp CEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSC-------------C-CC------------------
T ss_pred ceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccC-------------C-CC------------------
Confidence 677777642 246778888999999999999887431100 0 00
Q ss_pred chhhhHhhhhcccccCHHHHHHHHHhcCCCEEEEec-CCHHHHHHHHHcC-CcEEEEe
Q 021739 138 SGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGV-LTAEDASLAIQYG-AAGIIVS 193 (308)
Q Consensus 138 ~~~~~~~~~~~d~~~~~~~i~~ir~~~~~Pv~vK~~-~~~e~a~~~~~~G-~d~i~v~ 193 (308)
. ..+.+.++.++++|+.+++||+.-+. .++++++.+.+.| +|.|.+.
T Consensus 259 ~---------~~~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iG 307 (340)
T 3gr7_A 259 N---------VYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLVFLG 307 (340)
T ss_dssp C---------CCTTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSEEEEC
T ss_pred C---------CCccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEEEec
Confidence 0 01234577899999999999988765 5799999999999 9999763
No 315
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=94.98 E-value=0.14 Score=46.40 Aligned_cols=91 Identities=11% Similarity=0.188 Sum_probs=58.3
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+.. +++|||+.-|=.+..++++ +-.+|||++++-.|+.
T Consensus 35 v~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~~ 113 (313)
T 3dz1_A 35 TDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPPS 113 (313)
T ss_dssp HHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTT
T ss_pred HHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 45677899999998776653211111 1223445556666 7899998666556666654 3347999999999973
Q ss_pred HhcccCCHHHHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQMLRDE 274 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~~~ 274 (308)
+ ..++++.++++.+.+.
T Consensus 114 ~----~s~~~l~~~f~~va~a 130 (313)
T 3dz1_A 114 L----RTDEQITTYFRQATEA 130 (313)
T ss_dssp C----CSHHHHHHHHHHHHHH
T ss_pred C----CCHHHHHHHHHHHHHh
Confidence 2 2466666666655544
No 316
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=94.98 E-value=0.6 Score=38.96 Aligned_cols=87 Identities=20% Similarity=0.142 Sum_probs=52.1
Q ss_pred HHHHHHHHhc-CCCEEE--EecCC-HHH-HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEE-ecC
Q 021739 155 KDVKWLQTIT-SLPILV--KGVLT-AED-ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL-DGG 228 (308)
Q Consensus 155 ~~i~~ir~~~-~~Pv~v--K~~~~-~e~-a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia-~GG 228 (308)
+.++++|+.+ +.|+++ |.. + ++. ++.+.++|+|+|+++...+ ......+.+..+.. .+++.. .-.
T Consensus 42 ~~i~~l~~~~~~~~i~~~l~~~-di~~~~~~~a~~~Gad~v~vh~~~~------~~~~~~~~~~~~~~--g~~~gv~~~s 112 (207)
T 3ajx_A 42 SVITAVKKAHPDKIVFADMKTM-DAGELEADIAFKAGADLVTVLGSAD------DSTIAGAVKAAQAH--NKGVVVDLIG 112 (207)
T ss_dssp HHHHHHHHHSTTSEEEEEEEEC-SCHHHHHHHHHHTTCSEEEEETTSC------HHHHHHHHHHHHHH--TCEEEEECTT
T ss_pred HHHHHHHHhCCCCeEEEEEEec-CccHHHHHHHHhCCCCEEEEeccCC------hHHHHHHHHHHHHc--CCceEEEEec
Confidence 5788898887 789886 744 5 555 8999999999999865432 11222222222221 345422 223
Q ss_pred CCCHHHHH-HHHHcCCCEEEEch
Q 021739 229 VRRGTDVF-KALALGASGVFVGR 250 (308)
Q Consensus 229 I~~~~d~~-k~l~~GAd~V~ig~ 250 (308)
..|+.+.. .+...|+|.|.+..
T Consensus 113 ~~~p~~~~~~~~~~g~d~v~~~~ 135 (207)
T 3ajx_A 113 IEDKATRAQEVRALGAKFVEMHA 135 (207)
T ss_dssp CSSHHHHHHHHHHTTCSEEEEEC
T ss_pred CCChHHHHHHHHHhCCCEEEEEe
Confidence 34777744 44457999985543
No 317
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=94.95 E-value=0.2 Score=46.39 Aligned_cols=87 Identities=13% Similarity=0.052 Sum_probs=64.8
Q ss_pred HHHHHHHHHhc--CCCEEEEec--CCH----HHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEE
Q 021739 154 WKDVKWLQTIT--SLPILVKGV--LTA----EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 225 (308)
Q Consensus 154 ~~~i~~ir~~~--~~Pv~vK~~--~~~----e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia 225 (308)
.+.++++|+.+ ++++.+... .+. +.++.+.+.|+++|. +. -.+..+..+.++++.+ .+||++
T Consensus 178 ~~~v~avR~~~g~~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~ipIa~ 247 (377)
T 3my9_A 178 LRILETMRGEFGERIDLRLDFNQALTPFGAMKILRDVDAFRPTFIE-------QP-VPRRHLDAMAGFAAAL--DTPILA 247 (377)
T ss_dssp HHHHHHHHHHHGGGSEEEEECTTCCCTTTHHHHHHHHHTTCCSCEE-------CC-SCTTCHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHHHHHHhCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCCEEE-------CC-CCccCHHHHHHHHHhC--CCCEEE
Confidence 46788888875 678888754 232 456778888988885 10 0122467777887765 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 226 DGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
++.+.+..|+.+++..| +|.|++--
T Consensus 248 dE~~~~~~~~~~~i~~~~~d~v~~k~ 273 (377)
T 3my9_A 248 DESCFDAVDLMEVVRRQAADAISVKI 273 (377)
T ss_dssp STTCSSHHHHHHHHHHTCCSEEECCH
T ss_pred CCccCCHHHHHHHHHcCCCCEEEecc
Confidence 99999999999999977 89998754
No 318
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=94.94 E-value=0.098 Score=47.36 Aligned_cols=91 Identities=14% Similarity=0.210 Sum_probs=57.0
Q ss_pred HHHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCC-CEEEEchH
Q 021739 178 DASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGA-SGVFVGRP 251 (308)
Q Consensus 178 ~a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GA-d~V~ig~~ 251 (308)
.++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+++|||+.-|=.+..++++ +-.+|| |++++-.|
T Consensus 33 lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P 112 (311)
T 3h5d_A 33 LIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVP 112 (311)
T ss_dssp HHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECC
T ss_pred HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCC
Confidence 346677899999998876653211111 122334555566667899999766666677664 334697 99999999
Q ss_pred HHHhcccCCHHHHHHHHHHH
Q 021739 252 VPFSLAVDGEAGVRKVLQML 271 (308)
Q Consensus 252 ~l~~~~~~G~~~v~~~i~~l 271 (308)
+++.. .++++.++++.+
T Consensus 113 ~y~~~---s~~~l~~~f~~v 129 (311)
T 3h5d_A 113 YYNKP---SQEGMYQHFKAI 129 (311)
T ss_dssp CSSCC---CHHHHHHHHHHH
T ss_pred CCCCC---CHHHHHHHHHHH
Confidence 87642 345444444433
No 319
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=94.92 E-value=0.079 Score=51.04 Aligned_cols=68 Identities=19% Similarity=0.196 Sum_probs=52.7
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 249 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig 249 (308)
.+.++.+.++|+|.|.+....+. .....+.+.++++.. +++||++ |.+.+.+++..+..+|||+|.+|
T Consensus 231 ~~~a~~l~~aG~d~I~id~a~g~----~~~~~~~v~~i~~~~-p~~~Vi~-g~v~t~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVDTAHGH----SKGVIERVRWVKQTF-PDVQVIG-GNIATAEAAKALAEAGADAVKVG 298 (490)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCS----BHHHHHHHHHHHHHC-TTSEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhhcccceEEecccCCc----chhHHHHHHHHHHHC-CCceEEE-eeeCcHHHHHHHHHcCCCEEEEC
Confidence 57789999999999998643321 123456677777665 3688888 77999999999999999999985
No 320
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=94.92 E-value=0.08 Score=51.24 Aligned_cols=68 Identities=16% Similarity=0.248 Sum_probs=51.9
Q ss_pred HHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 021739 177 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGR 250 (308)
Q Consensus 177 e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~ 250 (308)
+.+..|.++|+|.|++....|.+ ....+.+.++++.. .+++||+ |.|-|.+-+...+.+|||+|-+|-
T Consensus 284 eR~~aLv~AGvD~iviD~ahGhs----~~v~~~i~~ik~~~-p~~~via-GNVaT~e~a~~Li~aGAD~vkVGi 351 (556)
T 4af0_A 284 DRLKLLAEAGLDVVVLDSSQGNS----VYQIEFIKWIKQTY-PKIDVIA-GNVVTREQAAQLIAAGADGLRIGM 351 (556)
T ss_dssp HHHHHHHHTTCCEEEECCSCCCS----HHHHHHHHHHHHHC-TTSEEEE-EEECSHHHHHHHHHHTCSEEEECS
T ss_pred HHHHHHHhcCCcEEEEecccccc----HHHHHHHHHHHhhC-CcceEEe-ccccCHHHHHHHHHcCCCEEeecC
Confidence 55788999999999997644331 22356667776654 4688877 889999999988899999997764
No 321
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=94.90 E-value=0.81 Score=38.62 Aligned_cols=88 Identities=14% Similarity=0.103 Sum_probs=53.4
Q ss_pred HHHHHHHhcCCCEEEEecC-CHHHHHHHHHcCCcEEEEecc-cccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHH
Q 021739 156 DVKWLQTITSLPILVKGVL-TAEDASLAIQYGAAGIIVSNH-GARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGT 233 (308)
Q Consensus 156 ~i~~ir~~~~~Pv~vK~~~-~~e~a~~~~~~G~d~i~v~~~-gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~ 233 (308)
.++.++. ++|++-.... +.++. .+.+..+|++.+... ||+.. .-+|+.+..+.. .+.|++..||+. ++
T Consensus 89 ~~~~l~~--~~~vika~~v~~~~~l-~~~~~~~d~~LlD~~~gGtG~---~fdW~~l~~~~~---~~~p~~LAGGL~-pe 158 (203)
T 1v5x_A 89 WAEAVGR--FYPVIKAFPLEGPARP-EWADYPAQALLLDGKRPGSGE---AYPRAWAKPLLA---TGRRVILAGGIA-PE 158 (203)
T ss_dssp HHHHHTT--TSCEEEEEECSSSCCG-GGGGSSCSEEEEECSSTTSCC---CCCGGGGHHHHH---TTSCEEECSSCC-ST
T ss_pred HHHHhcc--CCCEEEEEEcCChHhh-hhhhcCCCEEEEcCCCCCCCC---ccCHHHHHhhhc---cCCcEEEECCCC-HH
Confidence 4444522 5777633332 22223 334444899988763 33321 123444444211 257999999995 88
Q ss_pred HHHHHHHcCCCEEEEchHHH
Q 021739 234 DVFKALALGASGVFVGRPVP 253 (308)
Q Consensus 234 d~~k~l~~GAd~V~ig~~~l 253 (308)
++.+++..++.+|=+.|.+=
T Consensus 159 NV~~ai~~~p~gVDvsSGvE 178 (203)
T 1v5x_A 159 NLEEVLALRPYALDLASGVE 178 (203)
T ss_dssp THHHHHHHCCSEEEESGGGE
T ss_pred HHHHHHhcCCCEEEeCCcee
Confidence 99888867999999999764
No 322
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=94.86 E-value=0.59 Score=42.87 Aligned_cols=145 Identities=10% Similarity=0.039 Sum_probs=88.4
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCC-CCchhhhHhhhhccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKT-DDSGLASYVANQIDR 150 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~ 150 (308)
..|.+...++++.++++|++++-...-.| +.+-+.+. ..++.. .+...-++.....-+
T Consensus 31 ~gs~e~a~~li~~ak~aGadavKfq~~k~------~tl~s~~~---------------~~fq~~~~~~~~y~~~~~~~l~ 89 (349)
T 2wqp_A 31 EGSLKTAFEMVDAAYNAGAEVVKHQTHIV------EDEMSDEA---------------KQVIPGNADVSIYEIMERCALN 89 (349)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEEEECCH------HHHCCGGG---------------GGCCCTTCSSCHHHHHHHHCCC
T ss_pred cCCHHHHHHHHHHHHHhCCCEEeeeeccc------ccccCcch---------------hccccCCCCccHHHHHHHhCCC
Confidence 34788999999999999999987764222 22110110 001100 001111222211111
Q ss_pred ccCHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCC
Q 021739 151 SLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVR 230 (308)
Q Consensus 151 ~~~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~ 230 (308)
.-.++.+++.++..+++++. ..++.+.+..+.+.|+|.+.|..+. ...+..|.++.+ ...|||.+-|..
T Consensus 90 ~e~~~~L~~~~~~~Gi~~~s-t~~d~~svd~l~~~~v~~~KI~S~~-------~~n~~LL~~va~---~gkPviLstGma 158 (349)
T 2wqp_A 90 EEDEIKLKEYVESKGMIFIS-TLFSRAAALRLQRMDIPAYKIGSGE-------CNNYPLIKLVAS---FGKPIILSTGMN 158 (349)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-EECSHHHHHHHHHHTCSCEEECGGG-------TTCHHHHHHHHT---TCSCEEEECTTC
T ss_pred HHHHHHHHHHHHHhCCeEEE-eeCCHHHHHHHHhcCCCEEEECccc-------ccCHHHHHHHHh---cCCeEEEECCCC
Confidence 11234566666667888763 4578899999999999999985432 234566666653 378999999999
Q ss_pred CHHHHHHHHH----cCCCEEEE
Q 021739 231 RGTDVFKALA----LGASGVFV 248 (308)
Q Consensus 231 ~~~d~~k~l~----~GAd~V~i 248 (308)
|-+++..+.+ .|.+.+.+
T Consensus 159 t~~Ei~~Ave~i~~~G~~iiLl 180 (349)
T 2wqp_A 159 SIESIKKSVEIIREAGVPYALL 180 (349)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEE
Confidence 9999987765 46655443
No 323
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=94.84 E-value=0.34 Score=44.69 Aligned_cols=86 Identities=23% Similarity=0.206 Sum_probs=60.5
Q ss_pred HHHHHHHHHhc-CCCEEEEec--CC---HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEec
Q 021739 154 WKDVKWLQTIT-SLPILVKGV--LT---AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDG 227 (308)
Q Consensus 154 ~~~i~~ir~~~-~~Pv~vK~~--~~---~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~G 227 (308)
.+.++.+|+.+ ++++.+... .+ .+.++.+.+.|+++|. +.- .+..++.+.++++.+ ++||++++
T Consensus 177 ~~~v~avr~a~~~~~l~vDan~~~~~~~~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~--~ipIa~dE 246 (375)
T 1r0m_A 177 VQPVRATREAFPDIRLTVDANSAYTLADAGRLRQLDEYDLTYIE-------QPL-AWDDLVDHAELARRI--RTPLCLDE 246 (375)
T ss_dssp HHHHHHHHHHCTTSCEEEECTTCCCGGGHHHHHTTGGGCCSCEE-------CCS-CTTCSHHHHHHHHHC--SSCEEEST
T ss_pred HHHHHHHHHHcCCCeEEEeCCCCCCHHHHHHHHHHHhCCCcEEE-------CCC-CcccHHHHHHHHHhC--CCCEEecC
Confidence 46677787765 677777643 23 2334555667888775 100 122456677777665 79999999
Q ss_pred CCCCHHHHHHHHHcC-CCEEEEc
Q 021739 228 GVRRGTDVFKALALG-ASGVFVG 249 (308)
Q Consensus 228 GI~~~~d~~k~l~~G-Ad~V~ig 249 (308)
.+.+..|+.+++..| +|.|++-
T Consensus 247 ~~~~~~~~~~~i~~~~~d~v~ik 269 (375)
T 1r0m_A 247 SVASASDARKALALGAGGVINLK 269 (375)
T ss_dssp TCCSHHHHHHHHHHTSCSEEEEC
T ss_pred ccCCHHHHHHHHHhCCCCEEEEC
Confidence 999999999999987 8999984
No 324
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=94.83 E-value=0.058 Score=50.63 Aligned_cols=67 Identities=22% Similarity=0.340 Sum_probs=50.0
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 249 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig 249 (308)
.+.++.+.++|+|.|.+..+.|. .....+.+.++++.+ .+||++ |++.+.+++.++..+|||+|.+|
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~----~~~~~e~I~~ik~~~--~i~Vi~-g~V~t~e~A~~a~~aGAD~I~vG 212 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGH----SLNIIRTLKEIKSKM--NIDVIV-GNVVTEEATKELIENGADGIKVG 212 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCS----BHHHHHHHHHHHTTC--CCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCC----cccHHHHHHHHHhcC--CCeEEE-eecCCHHHHHHHHHcCCCEEEEe
Confidence 57889999999999987433221 011245566665544 688887 78899999999999999999996
No 325
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=94.83 E-value=0.56 Score=42.21 Aligned_cols=89 Identities=11% Similarity=0.069 Sum_probs=57.7
Q ss_pred HHHHHHHHhcCCCEEEEecCC----------HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEE
Q 021739 155 KDVKWLQTITSLPILVKGVLT----------AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 224 (308)
Q Consensus 155 ~~i~~ir~~~~~Pv~vK~~~~----------~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvi 224 (308)
+.|+.+++. +.++.+-.+.. .+.++...++|||.|.+.+ +++.+.+.++.+.+ ++|++
T Consensus 148 ~rI~Aa~~A-~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e~---------~~~~~~~~~i~~~~--~~P~~ 215 (305)
T 3ih1_A 148 QKIKAIKEV-APSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPEA---------LQSEEEFRLFNSKV--NAPLL 215 (305)
T ss_dssp HHHHHHHHH-CTTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEETT---------CCSHHHHHHHHHHS--CSCBE
T ss_pred HHHHHHHHc-CCCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEcC---------CCCHHHHHHHHHHc--CCCEE
Confidence 456666665 55544443311 2457788999999998742 34567778888877 67887
Q ss_pred Ee---cCCCCHHHHHHHHHcCCCEEEEchHHHHh
Q 021739 225 LD---GGVRRGTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 225 a~---GGI~~~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
++ +|-.-.-...+.-++|...|..|...+.+
T Consensus 216 ~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~ra 249 (305)
T 3ih1_A 216 ANMTEFGKTPYYSAEEFANMGFQMVIYPVTSLRV 249 (305)
T ss_dssp EECCTTSSSCCCCHHHHHHTTCSEEEECSHHHHH
T ss_pred EeecCCCCCCCCCHHHHHHcCCCEEEEchHHHHH
Confidence 53 34221123445557899999999877764
No 326
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=94.72 E-value=0.094 Score=50.62 Aligned_cols=69 Identities=16% Similarity=0.231 Sum_probs=53.7
Q ss_pred CHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 021739 175 TAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 249 (308)
Q Consensus 175 ~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig 249 (308)
+.+.++.+.++|+|.|.+....+. .....+.+.++++.. +++||++ |++.+.+++..+..+|||+|.+|
T Consensus 232 ~~~~a~~l~~aG~d~I~id~a~g~----~~~~~~~i~~ir~~~-p~~~Vi~-g~v~t~e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 232 NEERVKALVEAGVDVLLIDSSHGH----SEGVLQRIRETRAAY-PHLEIIG-GNVATAEGARALIEAGVSAVKVG 300 (496)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTT----SHHHHHHHHHHHHHC-TTCCEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred hHHHHHHHHhccCceEEecccccc----chHHHHHHHHHHHHC-CCceEEE-cccCcHHHHHHHHHhCCCEEEEC
Confidence 468899999999999998653221 122456677777665 3688888 77999999999999999999986
No 327
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=94.70 E-value=2.3 Score=38.25 Aligned_cols=181 Identities=14% Similarity=0.146 Sum_probs=109.1
Q ss_pred CceEeccccCcccCCCHHHHHHHHHHHHcCCceee--cC---CCCCCHHHHhc-------c-CCC-CceEEeeecCCchH
Q 021739 12 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVSS-------T-GPG-IRFFQLYVTKHRNV 77 (308)
Q Consensus 12 ~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~--s~---~~~~~~e~i~~-------~-~~~-~~~~Ql~~~~d~~~ 77 (308)
.|.++.||.-.+-.+.+.-..+.+-..+.|+...+ ++ ..+.+.+|..+ . ... +.+.... ..+.+.
T Consensus 27 ~~alvTPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~st~~ 105 (315)
T 3si9_A 27 VTALITPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAG-SNSTSE 105 (315)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHH
T ss_pred eEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHH
Confidence 36678888644335555556777777788986544 22 23456655332 1 222 6777665 456777
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHH
Q 021739 78 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 157 (308)
Q Consensus 78 ~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 157 (308)
..++.+.+++.|++++.+- .|... + .. ++- ..+..
T Consensus 106 ai~la~~A~~~Gadavlv~--~P~y~--------------~-------------------~~-~~~---------l~~~f 140 (315)
T 3si9_A 106 AVELAKHAEKAGADAVLVV--TPYYN--------------R-------------------PN-QRG---------LYTHF 140 (315)
T ss_dssp HHHHHHHHHHTTCSEEEEE--CCCSS--------------C-------------------CC-HHH---------HHHHH
T ss_pred HHHHHHHHHhcCCCEEEEC--CCCCC--------------C-------------------CC-HHH---------HHHHH
Confidence 8888899999999998765 35320 0 00 111 13567
Q ss_pred HHHHHhcCCCEEEEec-------CCHHHHHHHHH-c-CCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecC
Q 021739 158 KWLQTITSLPILVKGV-------LTAEDASLAIQ-Y-GAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGG 228 (308)
Q Consensus 158 ~~ir~~~~~Pv~vK~~-------~~~e~a~~~~~-~-G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GG 228 (308)
+.|.+.+++||++=.+ ++++...++.+ . .+-+|.-+. .+...+.++.+..+.++.|+ +|.
T Consensus 141 ~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiKdss----------gd~~~~~~l~~~~~~~f~v~-~G~ 209 (315)
T 3si9_A 141 SSIAKAISIPIIIYNIPSRSVIDMAVETMRDLCRDFKNIIGVKDAT----------GKIERASEQREKCGKDFVQL-SGD 209 (315)
T ss_dssp HHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECS----------CCTHHHHHHHHHHCSSSEEE-ESC
T ss_pred HHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHHhhCCCEEEEEeCC----------CCHHHHHHHHHHcCCCeEEE-ecC
Confidence 8888888999987653 56788888876 3 233333221 12333444444444456664 342
Q ss_pred CCCHHHHHHHHHcCCCEEEEchHH
Q 021739 229 VRRGTDVFKALALGASGVFVGRPV 252 (308)
Q Consensus 229 I~~~~d~~k~l~~GAd~V~ig~~~ 252 (308)
..-+..++.+|++++.-+..-
T Consensus 210 ---d~~~l~~l~~G~~G~is~~an 230 (315)
T 3si9_A 210 ---DCTALGFNAHGGVGCISVSSN 230 (315)
T ss_dssp ---GGGHHHHHHTTCCEEEESGGG
T ss_pred ---HHHHHHHHHcCCCEEEecHHH
Confidence 334667889999999877643
No 328
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=94.69 E-value=0.059 Score=48.30 Aligned_cols=77 Identities=18% Similarity=0.248 Sum_probs=50.3
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+++|||+.-|=.+..++.+ +-++|||++++-.|.+
T Consensus 28 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 107 (291)
T 3a5f_A 28 IEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYY 107 (291)
T ss_dssp HHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 45677899999998776654211111 122334445555666899987666656666653 3347999999999987
Q ss_pred Hh
Q 021739 254 FS 255 (308)
Q Consensus 254 ~~ 255 (308)
+.
T Consensus 108 ~~ 109 (291)
T 3a5f_A 108 NK 109 (291)
T ss_dssp SC
T ss_pred CC
Confidence 64
No 329
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=94.68 E-value=0.69 Score=42.95 Aligned_cols=145 Identities=14% Similarity=0.074 Sum_probs=88.6
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCC--CCchhhhHhhhhcc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKT--DDSGLASYVANQID 149 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d 149 (308)
..|.+...++++.++++|++++-...-.| +.+-+.+. ..++.. .+...-++.....-
T Consensus 40 ~Gsle~A~~li~~Ak~aGAdavKfQ~~k~------~tl~s~~~---------------~~fq~~~~~~~~~ye~~~~~~l 98 (385)
T 1vli_A 40 DGKLDQAFALIDAAAEAGADAVKFQMFQA------DRMYQKDP---------------GLYKTAAGKDVSIFSLVQSMEM 98 (385)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEECCBCG------GGGTSCCC------------------------CCCHHHHGGGBSS
T ss_pred cccHHHHHHHHHHHHHhCCCEEeeeeecc------CcccCcch---------------hhhccCCCCCccHHHHHHhcCC
Confidence 45788999999999999999987653222 11100000 000100 00011122221111
Q ss_pred cccCHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCC
Q 021739 150 RSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 229 (308)
Q Consensus 150 ~~~~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI 229 (308)
+.-.++.+++.++..+++++. ..++.+.+..+.+.|+|.+.|.... ...+..|.++.+ ...|||.+-|.
T Consensus 99 ~~e~~~~L~~~~~~~Gi~~~s-tpfD~~svd~l~~~~vd~~KIgS~~-------~~N~pLL~~va~---~gKPViLStGm 167 (385)
T 1vli_A 99 PAEWILPLLDYCREKQVIFLS-TVCDEGSADLLQSTSPSAFKIASYE-------INHLPLLKYVAR---LNRPMIFSTAG 167 (385)
T ss_dssp CGGGHHHHHHHHHHTTCEEEC-BCCSHHHHHHHHTTCCSCEEECGGG-------TTCHHHHHHHHT---TCSCEEEECTT
T ss_pred CHHHHHHHHHHHHHcCCcEEE-ccCCHHHHHHHHhcCCCEEEECccc-------ccCHHHHHHHHh---cCCeEEEECCC
Confidence 222356677777778888763 4478899999999999999985432 234566666643 37899999999
Q ss_pred CCHHHHHHHHH----cCCCEEEE
Q 021739 230 RRGTDVFKALA----LGASGVFV 248 (308)
Q Consensus 230 ~~~~d~~k~l~----~GAd~V~i 248 (308)
.|.+++..+++ .|.+-|.+
T Consensus 168 aTl~Ei~~Ave~i~~~Gn~~iiL 190 (385)
T 1vli_A 168 AEISDVHEAWRTIRAEGNNQIAI 190 (385)
T ss_dssp CCHHHHHHHHHHHHTTTCCCEEE
T ss_pred CCHHHHHHHHHHHHHCCCCcEEE
Confidence 99999987775 47643444
No 330
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=94.67 E-value=0.036 Score=50.00 Aligned_cols=91 Identities=20% Similarity=0.214 Sum_probs=55.5
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+++|||+.-|=.+..++++ +-.+|||++++-.|.+
T Consensus 31 v~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 110 (300)
T 3eb2_A 31 CDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEAY 110 (300)
T ss_dssp HHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECCS
T ss_pred HHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 45677899999987666553211111 122334555556667899887555445555553 3347999999999988
Q ss_pred HhcccCCHHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQMLR 272 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~ 272 (308)
+.. .++++.++++.+.
T Consensus 111 ~~~---~~~~l~~~f~~va 126 (300)
T 3eb2_A 111 FPL---KDAQIESYFRAIA 126 (300)
T ss_dssp SCC---CHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHH
Confidence 742 4555554444443
No 331
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=94.67 E-value=0.097 Score=48.35 Aligned_cols=90 Identities=20% Similarity=0.247 Sum_probs=56.2
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHHH----HHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKA----LALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~----l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+++|||+.-|=.+..++++. -++|||++++-.|++
T Consensus 86 v~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~PyY 165 (360)
T 4dpp_A 86 VNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYY 165 (360)
T ss_dssp HHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 56778899999998776653211111 1123344555566678999986565556666543 347999999999976
Q ss_pred HhcccCCHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQML 271 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l 271 (308)
+. -.++++.++++.+
T Consensus 166 ~k---~sq~gl~~hf~~I 180 (360)
T 4dpp_A 166 GK---TSIEGLIAHFQSV 180 (360)
T ss_dssp SC---CCHHHHHHHHHTT
T ss_pred CC---CCHHHHHHHHHHH
Confidence 53 2455555454443
No 332
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=94.63 E-value=0.1 Score=46.96 Aligned_cols=157 Identities=11% Similarity=0.030 Sum_probs=86.4
Q ss_pred CCceEeccccCcccCCCHHHHHHHHHHHHcCCc-e-eecCCCC----------CCHH---HHh----ccCCCCceEEeee
Q 021739 11 SMPIMIAPTAFQKMAHPEGECATARAASAAGTI-M-TLSSWAT----------SSVE---EVS----STGPGIRFFQLYV 71 (308)
Q Consensus 11 ~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~-~-~~s~~~~----------~~~e---~i~----~~~~~~~~~Ql~~ 71 (308)
..|++++-+ +. .++.-...++.+.+.|.. + .+. +++ .+.+ ++. +...-|.++.+.+
T Consensus 93 ~~p~~~~i~-g~---~~~~~~~~a~~~~~~g~d~~iein-~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~ 167 (311)
T 1jub_A 93 EGPIFFSIA-GM---SAAENIAMLKKIQESDFSGITELN-LSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPP 167 (311)
T ss_dssp SSCCEEEEC-CS---SHHHHHHHHHHHHHSCCCSEEEEE-SCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECC
T ss_pred CCCEEEEcC-CC---CHHHHHHHHHHHHhcCCCeEEEEe-ccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 456666643 21 333345677778888866 3 232 110 0222 222 1222378888876
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
..+.+.+.++++.++++|+++|.++- ....+... +.+.. .| ... . ....+. ++......
T Consensus 168 ~~~~~~~~~~a~~~~~~G~d~i~v~~-~~~~g~~i-~~~~~--~~-~~~-------------~--~~~~gG-~sg~~~~~ 226 (311)
T 1jub_A 168 YFDLVHFDIMAEILNQFPLTYVNSVN-SIGNGLFI-DPEAE--SV-VIK-------------P--KDGFGG-IGGAYIKP 226 (311)
T ss_dssp CCSHHHHHHHHHHHTTSCCCEEEECC-CEEEEECE-ETTTT--EE-SCS-------------G--GGGEEE-EESGGGHH
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEecC-CCCcCcee-ccCCC--Cc-ccc-------------c--CCCCCc-cccccccH
Confidence 56777778888999999999987752 21000000 00000 00 000 0 000000 00000112
Q ss_pred cCHHHHHHHHHhc--CCCEEEEe-cCCHHHHHHHHHcCCcEEEEe
Q 021739 152 LNWKDVKWLQTIT--SLPILVKG-VLTAEDASLAIQYGAAGIIVS 193 (308)
Q Consensus 152 ~~~~~i~~ir~~~--~~Pv~vK~-~~~~e~a~~~~~~G~d~i~v~ 193 (308)
..++.++++++.+ ++||+.-+ +.+.+++..+..+|||+|.+.
T Consensus 227 ~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg 271 (311)
T 1jub_A 227 TALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIG 271 (311)
T ss_dssp HHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 3578899999988 89988665 468999999989999999874
No 333
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=94.57 E-value=0.47 Score=43.60 Aligned_cols=86 Identities=13% Similarity=0.087 Sum_probs=60.2
Q ss_pred HHHHHHHHHhc-CCCEEEEec--CC---HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEec
Q 021739 154 WKDVKWLQTIT-SLPILVKGV--LT---AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDG 227 (308)
Q Consensus 154 ~~~i~~ir~~~-~~Pv~vK~~--~~---~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~G 227 (308)
.+.++++|+.+ ++++.+-.. .+ .+.++.+.+.|+++|. +.- .+..+..+.++++.+ ++||+++.
T Consensus 170 ~~~v~avr~a~~~~~l~vDan~~~~~~~~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~--~ipIa~dE 239 (369)
T 2zc8_A 170 YEVLKAVREAFPEATLTADANSAYSLANLAQLKRLDELRLDYIE-------QPL-AYDDLLDHAKLQREL--STPICLDE 239 (369)
T ss_dssp HHHHHHHHHHCTTSCEEEECTTCCCGGGHHHHHGGGGGCCSCEE-------CCS-CTTCSHHHHHHHHHC--SSCEEEST
T ss_pred HHHHHHHHHHcCCCeEEEecCCCCCHHHHHHHHHHHhCCCcEEE-------CCC-CcccHHHHHHHHhhC--CCCEEEcC
Confidence 46677777765 577777532 23 2344555667888775 100 122456667777665 79999999
Q ss_pred CCCCHHHHHHHHHcC-CCEEEEc
Q 021739 228 GVRRGTDVFKALALG-ASGVFVG 249 (308)
Q Consensus 228 GI~~~~d~~k~l~~G-Ad~V~ig 249 (308)
.+.+..|+.+++..| +|.|++-
T Consensus 240 ~~~~~~~~~~~i~~~~~d~v~ik 262 (369)
T 2zc8_A 240 SLTGAEKARKAIELGAGRVFNVK 262 (369)
T ss_dssp TCCSHHHHHHHHHHTCCSEEEEC
T ss_pred ccCCHHHHHHHHHhCCCCEEEEc
Confidence 999999999999988 8999984
No 334
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=94.55 E-value=0.24 Score=46.67 Aligned_cols=152 Identities=12% Similarity=0.080 Sum_probs=91.4
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCC-ccccccccccccccCCCCCCchhhhHhhhhccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPP-HLTLKNYEGLYIGKMDKTDDSGLASYVANQIDR 150 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 150 (308)
..+++.+.+.+++..+.||+.+-+.++.|..... |..+. +.. .... ....++ ........+.
T Consensus 147 ~~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~-------~g~~~~~~~---~~~~------~~~~p~-~~~~d~~~~~ 209 (424)
T 3v3w_A 147 GKDLDSTLEAVRKAKDKGYKAIRVQCGIPGIAKT-------YGVSTNTKS---YEPA------DADLPS-VEVWSTEKYL 209 (424)
T ss_dssp ESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCC-------TTCC--------CCSC------CBSSCC-EEEECHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeccCcccccc-------ccccccccc---cccc------cccccc-cccccchhHH
Confidence 4577888778888888999999988876421000 00000 000 0000 000000 0000000011
Q ss_pred ccCHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCe
Q 021739 151 SLNWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVP 222 (308)
Q Consensus 151 ~~~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 222 (308)
+...+.++++|+.+ +++|.+... .+.++ ++.+.+.|+++|.=- . .+.++..+.++++.+ ++|
T Consensus 210 ~~d~e~v~avR~avG~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP------~--~~~d~~~~~~l~~~~--~iP 279 (424)
T 3v3w_A 210 NYIPDVFAAVRKEFGPDIHLLHDVHHRLTPIEAARLGKALEPYHLFWMEDA------V--PAENQESFKLIRQHT--TTP 279 (424)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECC------S--CCSSTTHHHHHHHHC--CSC
T ss_pred HHHHHHHHHHHHHcCCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCEEECC------C--ChHhHHHHHHHHhhC--CCC
Confidence 23467799999986 688988754 45555 466778899988510 0 112355667777665 799
Q ss_pred EEEecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 223 VFLDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 223 via~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
|++++.+.+..|+.++++.| +|.|++--
T Consensus 280 Ia~dE~~~~~~~~~~~i~~ga~d~v~~k~ 308 (424)
T 3v3w_A 280 LAVGEVFNSIHDCRELIQNQWIDYIRTTI 308 (424)
T ss_dssp EEECTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred EEEccCcCCHHHHHHHHHcCCCCeEeecc
Confidence 99999999999999999987 89988764
No 335
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=94.54 E-value=0.09 Score=47.39 Aligned_cols=64 Identities=17% Similarity=0.197 Sum_probs=44.7
Q ss_pred HHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHH----------HHHHHHHcCCCEEE
Q 021739 178 DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGT----------DVFKALALGASGVF 247 (308)
Q Consensus 178 ~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~----------d~~k~l~~GAd~V~ 247 (308)
.++.+.++|+|+++.+.. . +..+++.++ .-.++.++||+-.. .+.+++.+|||.+.
T Consensus 163 lA~~a~~~G~dGvV~s~~----------E---~~~IR~~~~-~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~iV 228 (303)
T 3ru6_A 163 FSKISYENGLDGMVCSVF----------E---SKKIKEHTS-SNFLTLTPGIRPFGETNDDQKRVANLAMARENLSDYIV 228 (303)
T ss_dssp HHHHHHHTTCSEEECCTT----------T---HHHHHHHSC-TTSEEEECCCCTTC--------CCSHHHHHHTTCSEEE
T ss_pred HHHHHHHcCCCEEEECHH----------H---HHHHHHhCC-CccEEECCCcCcccCCcccccccCCHHHHHHcCCCEEE
Confidence 466778899999875321 1 345555553 33588899998321 35677789999999
Q ss_pred EchHHHHh
Q 021739 248 VGRPVPFS 255 (308)
Q Consensus 248 ig~~~l~~ 255 (308)
+||+++.+
T Consensus 229 vGr~I~~a 236 (303)
T 3ru6_A 229 VGRPIYKN 236 (303)
T ss_dssp ECHHHHTS
T ss_pred EChHHhCC
Confidence 99998864
No 336
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=94.51 E-value=0.13 Score=47.34 Aligned_cols=89 Identities=17% Similarity=0.118 Sum_probs=53.9
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVPF 254 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l~ 254 (308)
++.+++.|+|+|.+.++.|....-.......+.+. ...+++|||+.-|=.+..++++ +-.+|||++++-.|+++
T Consensus 53 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~ 130 (344)
T 2hmc_A 53 GKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLS 130 (344)
T ss_dssp HHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSS
T ss_pred HHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCccC
Confidence 45677899999998776653211111112222232 3345899987666556555553 33479999999999876
Q ss_pred h-cccCCHHHHHHHHHHHH
Q 021739 255 S-LAVDGEAGVRKVLQMLR 272 (308)
Q Consensus 255 ~-~~~~G~~~v~~~i~~l~ 272 (308)
. . .++++.++++.+.
T Consensus 131 ~~~---s~~~l~~~f~~IA 146 (344)
T 2hmc_A 131 RGS---VIAAQKAHFKAIL 146 (344)
T ss_dssp STT---CHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHH
Confidence 4 2 3555555554443
No 337
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=94.51 E-value=0.11 Score=47.35 Aligned_cols=103 Identities=16% Similarity=0.043 Sum_probs=64.5
Q ss_pred CceEEeeecCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhH
Q 021739 64 IRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASY 143 (308)
Q Consensus 64 ~~~~Ql~~~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~ 143 (308)
|.++.+.+..+.+.+.++++.+++.|+++|.++-..... . +.+ .+. .. ... + + +
T Consensus 213 Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~---~-~~~----~~~-~~------------~~~-g-g---~ 266 (336)
T 1f76_A 213 PIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDR---S-LVQ----GMK-NC------------DQT-G-G---L 266 (336)
T ss_dssp CEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCC---T-TST----TST-TT------------TCS-S-E---E
T ss_pred ceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccc---c-ccc----ccc-cc------------ccC-C-C---c
Confidence 788887654555677888899999999999887322110 0 000 000 00 000 0 0 0
Q ss_pred hhhhcccccCHHHHHHHHHhc--CCCEEEEe-cCCHHHHHHHHHcCCcEEEEe
Q 021739 144 VANQIDRSLNWKDVKWLQTIT--SLPILVKG-VLTAEDASLAIQYGAAGIIVS 193 (308)
Q Consensus 144 ~~~~~d~~~~~~~i~~ir~~~--~~Pv~vK~-~~~~e~a~~~~~~G~d~i~v~ 193 (308)
-.+ ......++.++++++.+ ++||+.-+ +.+.+++.++.++|||+|.+.
T Consensus 267 ~g~-~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 267 SGR-PLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIY 318 (336)
T ss_dssp EEG-GGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred CCc-hhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEee
Confidence 000 01123467889999888 89988654 478999999999999999874
No 338
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=94.48 E-value=0.38 Score=44.80 Aligned_cols=118 Identities=11% Similarity=0.022 Sum_probs=83.3
Q ss_pred CchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccC
Q 021739 74 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 153 (308)
Q Consensus 74 d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 153 (308)
+++.+.+.++++.+.|++.+-+.+++. ++..
T Consensus 142 ~~e~~~~~a~~~~~~G~~~~KiKvG~~-------------------------------------------------~~~d 172 (391)
T 3gd6_A 142 EVESNLDVVRQKLEQGFDVFRLYVGKN-------------------------------------------------LDAD 172 (391)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSSC-------------------------------------------------HHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeCCC-------------------------------------------------HHHH
Confidence 466666677777778999988776431 1122
Q ss_pred HHHHHHHHHhc--CCCEE-EEec--CCHHH----HHHHHHcCC--cEEEEecccccCCCCCcchHHHHHHHHHHccCCCe
Q 021739 154 WKDVKWLQTIT--SLPIL-VKGV--LTAED----ASLAIQYGA--AGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVP 222 (308)
Q Consensus 154 ~~~i~~ir~~~--~~Pv~-vK~~--~~~e~----a~~~~~~G~--d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 222 (308)
.+.++++|+.+ ++++. +... .+.++ ++.+.+.|+ ++|. +. -.+.+++.+.++++.+ ++|
T Consensus 173 ~~~v~avR~a~g~~~~l~~vDan~~~~~~~A~~~~~~l~~~~i~~~~iE-------qP-~~~~d~~~~~~l~~~~--~iP 242 (391)
T 3gd6_A 173 EEFLSRVKEEFGSRVRIKSYDFSHLLNWKDAHRAIKRLTKYDLGLEMIE-------SP-APRNDFDGLYQLRLKT--DYP 242 (391)
T ss_dssp HHHHHHHHHHHGGGCEEEEEECTTCSCHHHHHHHHHHHTTCCSSCCEEE-------CC-SCTTCHHHHHHHHHHC--SSC
T ss_pred HHHHHHHHHHcCCCCcEEEecCCCCcCHHHHHHHHHHHHhcCCCcceec-------CC-CChhhHHHHHHHHHHc--CCC
Confidence 46788898875 57888 7753 45555 456677888 7775 10 0122567778887766 799
Q ss_pred EEEecCCCCHHHHHHHHHcC-CCEEEEchHH
Q 021739 223 VFLDGGVRRGTDVFKALALG-ASGVFVGRPV 252 (308)
Q Consensus 223 via~GGI~~~~d~~k~l~~G-Ad~V~ig~~~ 252 (308)
| +..+.+..|+.++++.| +|.|++--..
T Consensus 243 I--dE~~~~~~~~~~~~~~~~~d~v~~k~~~ 271 (391)
T 3gd6_A 243 I--SEHVWSFKQQQEMIKKDAIDIFNISPVF 271 (391)
T ss_dssp E--EEECCCHHHHHHHHHHTCCSEEEECHHH
T ss_pred c--CCCCCCHHHHHHHHHcCCCCEEEECchh
Confidence 8 88999999999999987 8999987644
No 339
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=94.47 E-value=0.34 Score=44.40 Aligned_cols=89 Identities=13% Similarity=0.120 Sum_probs=62.6
Q ss_pred CceEEeee------cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCC
Q 021739 64 IRFFQLYV------TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDD 137 (308)
Q Consensus 64 ~~~~Ql~~------~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~ 137 (308)
+.++-+.+ +.+.+...++++.+++.|++.|.++.+..... + ..
T Consensus 221 pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~------------~-~~------------------ 269 (349)
T 3hgj_A 221 PLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLR------------V-RI------------------ 269 (349)
T ss_dssp CEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSS------------S-CC------------------
T ss_pred eEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcc------------c-cc------------------
Confidence 56776664 23566778888999999999998875311000 0 00
Q ss_pred chhhhHhhhhcccccCHHHHHHHHHhcCCCEEEEec-CCHHHHHHHHHcC-CcEEEE
Q 021739 138 SGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGV-LTAEDASLAIQYG-AAGIIV 192 (308)
Q Consensus 138 ~~~~~~~~~~~d~~~~~~~i~~ir~~~~~Pv~vK~~-~~~e~a~~~~~~G-~d~i~v 192 (308)
. ..+.+.++.++++|+.+++||+.-+. .+++++..+.+.| +|.|.+
T Consensus 270 ~---------~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~i 317 (349)
T 3hgj_A 270 P---------LAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSADLVLL 317 (349)
T ss_dssp C---------CCTTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCSEEEE
T ss_pred C---------CCccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCceEEEe
Confidence 0 01234567889999989999988765 5799999999999 999976
No 340
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=94.44 E-value=0.76 Score=42.57 Aligned_cols=88 Identities=13% Similarity=0.062 Sum_probs=63.2
Q ss_pred HHHHHHHHHhc--CCCEEEEec--CCHHHH----HHHHH--cCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeE
Q 021739 154 WKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQ--YGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 154 ~~~i~~ir~~~--~~Pv~vK~~--~~~e~a----~~~~~--~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipv 223 (308)
.+.++++|+.+ ++++.+-.. .+.+++ +.+.+ .++++|. +. -.+..++.+.++++.+ .+||
T Consensus 173 ~~~v~avR~a~g~~~~L~vDaN~~w~~~~A~~~~~~l~~~~~~l~~iE-------eP-~~~~d~~~~~~l~~~~--~iPI 242 (379)
T 3r0u_A 173 IQLLKALDNEFSKNIKFRFDANQGWNLAQTKQFIEEINKYSLNVEIIE-------QP-VKYYDIKAMAEITKFS--NIPV 242 (379)
T ss_dssp HHHHHHHHHHCCTTSEEEEECTTCCCHHHHHHHHHHHHTSCCCEEEEE-------CC-SCTTCHHHHHHHHHHC--SSCE
T ss_pred HHHHHHHHHhcCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCCcEEEE-------CC-CCcccHHHHHHHHhcC--CCCE
Confidence 56789999986 478887643 455554 55566 5666663 10 0122467777887765 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEchH
Q 021739 224 FLDGGVRRGTDVFKALALG-ASGVFVGRP 251 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~G-Ad~V~ig~~ 251 (308)
.++..+.+..|+.+++..| +|.+++--.
T Consensus 243 a~dE~~~~~~~~~~~i~~~a~d~v~~k~~ 271 (379)
T 3r0u_A 243 VADESVFDAKDAERVIDEQACNMINIKLA 271 (379)
T ss_dssp EESTTCSSHHHHHHHHHTTCCSEEEECHH
T ss_pred EeCCccCCHHHHHHHHHcCCCCEEEECcc
Confidence 9999999999999999987 799988543
No 341
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=94.42 E-value=0.17 Score=45.52 Aligned_cols=76 Identities=14% Similarity=0.162 Sum_probs=56.4
Q ss_pred EEEecCCHHHHHHHHHcCCcEEEEecccccC--CCC---CcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCC
Q 021739 169 LVKGVLTAEDASLAIQYGAAGIIVSNHGARQ--LDY---VPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGA 243 (308)
Q Consensus 169 ~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~--~~~---~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GA 243 (308)
++..+.+++.|+...++||+.|.+--..-+. ..+ .....+.|.++++.+ ++||++-+++....++..+.++||
T Consensus 24 v~~d~~~~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v--~iPvl~k~~i~~ide~qil~aaGA 101 (297)
T 4adt_A 24 VIMDVKNVEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCI--SINVLAKVRIGHFVEAQILEELKV 101 (297)
T ss_dssp EEEEESSHHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTC--CSEEEEEEETTCHHHHHHHHHTTC
T ss_pred cccCCCcHHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhc--CCCEEEeccCCcHHHHHHHHHcCC
Confidence 4456678899999999999999875211000 111 124678888888776 899999999988888888888999
Q ss_pred CEE
Q 021739 244 SGV 246 (308)
Q Consensus 244 d~V 246 (308)
|.|
T Consensus 102 D~I 104 (297)
T 4adt_A 102 DML 104 (297)
T ss_dssp SEE
T ss_pred CEE
Confidence 999
No 342
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=94.41 E-value=0.12 Score=50.11 Aligned_cols=68 Identities=18% Similarity=0.205 Sum_probs=51.9
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 249 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig 249 (308)
.+.++.+.++|+|.|.+....|.. ...++.+.++++.+ +++||++ |++.+.+++.++..+|||++.+|
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~~G~~----~~~~~~i~~i~~~~-~~~pvi~-~~v~t~~~a~~l~~aGad~I~vg 324 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSSQGNS----VYQIAMVHYIKQKY-PHLQVIG-GNVVTAAQAKNLIDAGVDGLRVG 324 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCCS----HHHHHHHHHHHHHC-TTCEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEeeccCCcc----hhHHHHHHHHHHhC-CCCceEe-cccchHHHHHHHHHcCCCEEEEC
Confidence 467889999999999985432211 12356677777766 3689886 77999999999999999999774
No 343
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=94.38 E-value=0.24 Score=44.90 Aligned_cols=81 Identities=20% Similarity=0.158 Sum_probs=59.6
Q ss_pred HHHHHHHHHhcCCCEEEEecCC--------HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEE
Q 021739 154 WKDVKWLQTITSLPILVKGVLT--------AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 225 (308)
Q Consensus 154 ~~~i~~ir~~~~~Pv~vK~~~~--------~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia 225 (308)
.+.++++++.++.|+.+....+ .+.++.+.+.|+|.|.++.. .+ ...+..+++. .++++.
T Consensus 56 ~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g--------~p-~~~~~~l~~~---gi~vi~ 123 (328)
T 2gjl_A 56 AAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGN--------DP-GEHIAEFRRH---GVKVIH 123 (328)
T ss_dssp HHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEES--------CC-HHHHHHHHHT---TCEEEE
T ss_pred HHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCC--------Cc-HHHHHHHHHc---CCCEEe
Confidence 3567888887778887765543 36788999999999987532 11 3445555432 578885
Q ss_pred ecCCCCHHHHHHHHHcCCCEEEE
Q 021739 226 DGGVRRGTDVFKALALGASGVFV 248 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~GAd~V~i 248 (308)
.+.+.+++.++...|+|++.+
T Consensus 124 --~v~t~~~a~~~~~~GaD~i~v 144 (328)
T 2gjl_A 124 --KCTAVRHALKAERLGVDAVSI 144 (328)
T ss_dssp --EESSHHHHHHHHHTTCSEEEE
T ss_pred --eCCCHHHHHHHHHcCCCEEEE
Confidence 478999999999999999998
No 344
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=94.34 E-value=0.13 Score=45.27 Aligned_cols=79 Identities=24% Similarity=0.432 Sum_probs=51.0
Q ss_pred HHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHH----H------HHHHHHcCCCEEE
Q 021739 178 DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGT----D------VFKALALGASGVF 247 (308)
Q Consensus 178 ~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~----d------~~k~l~~GAd~V~ 247 (308)
.++.+.++|+|+++.+. ..+..+++.++. -.++.+.||+-.. | +.+++.+|||.+.
T Consensus 149 ~A~~a~~~G~dGvV~s~-------------~e~~~ir~~~~~-~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iV 214 (259)
T 3tfx_A 149 LAKMAKHSGADGVICSP-------------LEVKKLHENIGD-DFLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIV 214 (259)
T ss_dssp HHHHHHHTTCCEEECCG-------------GGHHHHHHHHCS-SSEEEECCCCCC-----------CHHHHHHTTCSEEE
T ss_pred HHHHHHHhCCCEEEECH-------------HHHHHHHhhcCC-ccEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEE
Confidence 46667789999998642 123444444432 3467889998542 2 6788899999999
Q ss_pred EchHHHHhcccCCHHHHHHHHHHHHHHHH
Q 021739 248 VGRPVPFSLAVDGEAGVRKVLQMLRDEFE 276 (308)
Q Consensus 248 ig~~~l~~~~~~G~~~v~~~i~~l~~~l~ 276 (308)
+||+++.+ ..+. +.++.++++++
T Consensus 215 vGr~I~~a---~dp~---~a~~~i~~~~~ 237 (259)
T 3tfx_A 215 VGRPITLA---SDPK---AAYEAIKKEFN 237 (259)
T ss_dssp ECHHHHTS---SSHH---HHHHHHHHHHT
T ss_pred EChHHhCC---CCHH---HHHHHHHHHHH
Confidence 99998864 2332 34555555544
No 345
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=94.31 E-value=0.12 Score=49.11 Aligned_cols=86 Identities=19% Similarity=0.193 Sum_probs=57.1
Q ss_pred CHHHHHHHHHhc--CCCEEEE-ecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCC
Q 021739 153 NWKDVKWLQTIT--SLPILVK-GVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 229 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK-~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI 229 (308)
+++...++.+.. +++++.- ++.++++++++.++ +|++.|...--+ .......+.++.. .++.| .|+
T Consensus 194 dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVGealmr----~~d~~~~~~~l~~---~~~KI---CGi 262 (452)
T 1pii_A 194 DLNRTRELAPKLGHNVTVISESGINTYAQVRELSHF-ANGFLIGSALMA----HDDLHAAVRRVLL---GENKV---CGL 262 (452)
T ss_dssp CTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT-CSEEEECHHHHT----CSCHHHHHHHHHH---CSCEE---CCC
T ss_pred CHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh-CCEEEEcHHHcC----CcCHHHHHHHHHH---Hhccc---cCC
Confidence 356666666654 4455443 34789999999999 999988532111 1123344555432 23444 489
Q ss_pred CCHHHHHHHHHcCCCEEEEc
Q 021739 230 RRGTDVFKALALGASGVFVG 249 (308)
Q Consensus 230 ~~~~d~~k~l~~GAd~V~ig 249 (308)
++.+|+..+.++|||++++=
T Consensus 263 t~~eda~~a~~~Gad~iGfI 282 (452)
T 1pii_A 263 TRGQDAKAAYDAGAIYGGLI 282 (452)
T ss_dssp CSHHHHHHHHHHTCSEEEEE
T ss_pred CcHHHHHHHHhcCCCEEEee
Confidence 99999999999999998754
No 346
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=94.25 E-value=0.75 Score=42.19 Aligned_cols=82 Identities=15% Similarity=0.122 Sum_probs=59.5
Q ss_pred HHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHH
Q 021739 155 KDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTD 234 (308)
Q Consensus 155 ~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d 234 (308)
+.+++.++..+++++. ..++.+.+..+.+.|+|.+.|..+. ...+..|.++.+ .+.|||.+-|..|-++
T Consensus 81 ~~L~~~~~~~Gi~~~s-t~fD~~svd~l~~~~v~~~KI~S~~-------~~N~pLL~~va~---~gKPviLstGmstl~E 149 (350)
T 3g8r_A 81 QKLVAEMKANGFKAIC-TPFDEESVDLIEAHGIEIIKIASCS-------FTDWPLLERIAR---SDKPVVASTAGARRED 149 (350)
T ss_dssp HHHHHHHHHTTCEEEE-EECSHHHHHHHHHTTCCEEEECSSS-------TTCHHHHHHHHT---SCSCEEEECTTCCHHH
T ss_pred HHHHHHHHHcCCcEEe-ccCCHHHHHHHHHcCCCEEEECccc-------ccCHHHHHHHHh---hCCcEEEECCCCCHHH
Confidence 3455555567888763 4578899999999999999985432 234666766653 3789999999999999
Q ss_pred HHHHHH----cCCCEEE
Q 021739 235 VFKALA----LGASGVF 247 (308)
Q Consensus 235 ~~k~l~----~GAd~V~ 247 (308)
+..+++ .|.+.+.
T Consensus 150 i~~Ave~i~~~g~~viL 166 (350)
T 3g8r_A 150 IDKVVSFMLHRGKDLTI 166 (350)
T ss_dssp HHHHHHHHHTTTCCEEE
T ss_pred HHHHHHHHHHcCCCEEE
Confidence 988765 3666443
No 347
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=94.25 E-value=0.4 Score=43.95 Aligned_cols=92 Identities=18% Similarity=0.154 Sum_probs=60.5
Q ss_pred CceEEeeecCCc----hHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCch
Q 021739 64 IRFFQLYVTKHR----NVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSG 139 (308)
Q Consensus 64 ~~~~Ql~~~~d~----~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~ 139 (308)
|.++.+..+.+. +...++++.++++|++.|.++-..... ++ ++
T Consensus 128 PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~---------g~------------------------~g 174 (350)
T 3b0p_A 128 PVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALL---------AL------------------------ST 174 (350)
T ss_dssp CEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC--------------------------------------
T ss_pred ceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCchhc---------cc------------------------Cc
Confidence 666655433322 356777888899999998886321100 00 00
Q ss_pred hhhHhhhhcccccCHHHHHHHHHhc-CCCEEEEec-CCHHHHHHHHHcCCcEEEEe
Q 021739 140 LASYVANQIDRSLNWKDVKWLQTIT-SLPILVKGV-LTAEDASLAIQYGAAGIIVS 193 (308)
Q Consensus 140 ~~~~~~~~~d~~~~~~~i~~ir~~~-~~Pv~vK~~-~~~e~a~~~~~~G~d~i~v~ 193 (308)
.. .+ ..+...|+.++++++.+ ++||++-+. .+.+++..+.+ |+|+|.+.
T Consensus 175 ~~---~~-~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-GaD~V~iG 225 (350)
T 3b0p_A 175 KA---NR-EIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RVDGVMLG 225 (350)
T ss_dssp ---------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TSSEEEEC
T ss_pred cc---cc-CCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CCCEEEEC
Confidence 00 00 12345689999999998 899988765 68999999998 99999874
No 348
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=94.09 E-value=0.49 Score=43.92 Aligned_cols=88 Identities=16% Similarity=0.092 Sum_probs=63.5
Q ss_pred HHHHHHHHHhc-CCCEEEEec--CCH----HHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEe
Q 021739 154 WKDVKWLQTIT-SLPILVKGV--LTA----EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLD 226 (308)
Q Consensus 154 ~~~i~~ir~~~-~~Pv~vK~~--~~~----e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~ 226 (308)
.+.++++|+.+ ++++.+... .+. +.++.+.+.|+++|. +. ..+..+..+.++++.+ .+||.++
T Consensus 180 ~~~v~avR~a~~~~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPIa~d 249 (385)
T 3i6e_A 180 IMRLELIARDFPEFRVRVDYNQGLEIDEAVPRVLDVAQFQPDFIE-------QP-VRAHHFELMARLRGLT--DVPLLAD 249 (385)
T ss_dssp HHHHHHHHHHCTTSEEEEECTTCCCGGGHHHHHHHHHTTCCSCEE-------CC-SCTTCHHHHHHHHTTC--SSCEEES
T ss_pred HHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------CC-CCcccHHHHHHHHHhC--CCCEEEe
Confidence 46788888876 677887753 333 346677788888885 10 0122466777776554 7999999
Q ss_pred cCCCCHHHHHHHHHcC-CCEEEEchH
Q 021739 227 GGVRRGTDVFKALALG-ASGVFVGRP 251 (308)
Q Consensus 227 GGI~~~~d~~k~l~~G-Ad~V~ig~~ 251 (308)
..+.+..|+.+++..| +|.|++--.
T Consensus 250 E~~~~~~~~~~~~~~~~~d~v~~k~~ 275 (385)
T 3i6e_A 250 ESVYGPEDMVRAAHEGICDGVSIKIM 275 (385)
T ss_dssp TTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred CCcCCHHHHHHHHHcCCCCEEEeccc
Confidence 9999999999999977 899988643
No 349
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=94.06 E-value=2 Score=39.39 Aligned_cols=236 Identities=15% Similarity=0.164 Sum_probs=117.6
Q ss_pred CCceEeccccCcccCCCHHHHHHHHHHHHcCCce----eecCCCCCCHHHHhcc----CCCCceEEeee--cCCchHHHH
Q 021739 11 SMPIMIAPTAFQKMAHPEGECATARAASAAGTIM----TLSSWATSSVEEVSST----GPGIRFFQLYV--TKHRNVDAQ 80 (308)
Q Consensus 11 ~~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~----~~s~~~~~~~e~i~~~----~~~~~~~Ql~~--~~d~~~~~~ 80 (308)
..|++||=++...-.+-+--..+..+|++.|+.. ++= ..+...+.+... ..+..+++.|- .-.+++...
T Consensus 4 ~~~~IIAEig~NHnGdle~Ak~lI~~A~~aGad~~~d~avK-fQt~~~d~l~~~~~~~~~~~~~~~~~~~~el~~e~~~~ 82 (350)
T 3g8r_A 4 SKPLFIFEMANNHMGNVEHGVALIRAIRESCQGFDFDFGFK-LQYRNLDTFIHSSFKGRDDVKYVKRFEETRLQPEQMQK 82 (350)
T ss_dssp -CCEEEEECTTTTTTCSHHHHHHHHHHHHHTTTCCSEEEEE-EEECCHHHHBCGGGTTCCSSSSHHHHHHTCCCHHHHHH
T ss_pred CCCEEEEEECCCccCcHHHHHHHHHHHHHhCCcccCCeeEE-ccccchhhhcChhccCccHHHHHHHHHHhcCCHHHHHH
Confidence 4699999998874444444456888999998851 221 111223333211 01112333331 135677888
Q ss_pred HHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc-CHHHHHH
Q 021739 81 LVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL-NWKDVKW 159 (308)
Q Consensus 81 ~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~i~~ 159 (308)
+.+.+++.|..++- + |.. .+.-+.-..+..| .++.. -.+. .+..|++
T Consensus 83 L~~~~~~~Gi~~~s-t---~fD-~~svd~l~~~~v~--------------~~KI~-------------S~~~~N~pLL~~ 130 (350)
T 3g8r_A 83 LVAEMKANGFKAIC-T---PFD-EESVDLIEAHGIE--------------IIKIA-------------SCSFTDWPLLER 130 (350)
T ss_dssp HHHHHHHTTCEEEE-E---ECS-HHHHHHHHHTTCC--------------EEEEC-------------SSSTTCHHHHHH
T ss_pred HHHHHHHcCCcEEe-c---cCC-HHHHHHHHHcCCC--------------EEEEC-------------cccccCHHHHHH
Confidence 88889999987653 2 221 1111111122212 11111 0111 3567888
Q ss_pred HHHhcCCCEEEEec-CCHHHH----HHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEe----cCCC
Q 021739 160 LQTITSLPILVKGV-LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLD----GGVR 230 (308)
Q Consensus 160 ir~~~~~Pv~vK~~-~~~e~a----~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~----GGI~ 230 (308)
+.+ +++||++|.. .|.++. +.+.+.|-+.+.+....++........+..+..+++.. +.+||..+ |+.
T Consensus 131 va~-~gKPviLstGmstl~Ei~~Ave~i~~~g~~viLlhC~s~YPt~~~~~nL~aI~~Lk~~f-p~lpVG~SdHt~g~~- 207 (350)
T 3g8r_A 131 IAR-SDKPVVASTAGARREDIDKVVSFMLHRGKDLTIMHCVAEYPTPDDHLHLARIKTLRQQY-AGVRIGYSTHEDPDL- 207 (350)
T ss_dssp HHT-SCSCEEEECTTCCHHHHHHHHHHHHTTTCCEEEEECCCCSSCCGGGCCTTHHHHHHHHC-TTSEEEEEECCCSSC-
T ss_pred HHh-hCCcEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCcccCCHHHHHHHHHHC-CCCCEEcCCCCCCCc-
Confidence 765 6999999965 466554 34445687755543322211111111344566665543 25888766 222
Q ss_pred CHHHHHHHHHcCCCEEEEchHHHH-h-cccCCHHH-HHHHHHHHHHHHHHHHHHcCCC
Q 021739 231 RGTDVFKALALGASGVFVGRPVPF-S-LAVDGEAG-VRKVLQMLRDEFELTMALSGCR 285 (308)
Q Consensus 231 ~~~d~~k~l~~GAd~V~ig~~~l~-~-~~~~G~~~-v~~~i~~l~~~l~~~m~~~G~~ 285 (308)
. .-..-|.++||+. |=.=|-- . ....+... --+-+..+.++++..-..+|..
T Consensus 208 ~-~~~~AAvAlGA~v--IEkH~tldr~~g~D~~~Sl~P~ef~~lv~~ir~i~~alG~~ 262 (350)
T 3g8r_A 208 M-EPIMLAVAQGATV--FEKHVGLPTDQYGINNYSANPEQVRRWLAAAARALAMLGDG 262 (350)
T ss_dssp C-HHHHHHHHTTCCE--EEEEBCCCBTTBCCCTTCBCHHHHHHHHHHHHHHHHHHCCT
T ss_pred c-HHHHHHHHcCCCE--EEEecCcccCCCCcccccCCHHHHHHHHHHHHHHHHHcCCC
Confidence 2 2234688999973 3321110 0 01111100 0134566667777777777753
No 350
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=94.04 E-value=0.57 Score=39.64 Aligned_cols=44 Identities=23% Similarity=0.247 Sum_probs=37.4
Q ss_pred ccCHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEec
Q 021739 151 SLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSN 194 (308)
Q Consensus 151 ~~~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~ 194 (308)
...|+.++++++..++||++=+..+++.+..+.++|+|++.++.
T Consensus 150 ~~~~~~l~~~~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs 193 (221)
T 1yad_A 150 GRGVSLLSDIKQRISIPVIAIGGMTPDRLRDVKQAGADGIAVMS 193 (221)
T ss_dssp -CHHHHHHHHHHHCCSCEEEESSCCGGGHHHHHHTTCSEEEESH
T ss_pred CCCHHHHHHHHHhCCCCEEEECCCCHHHHHHHHHcCCCEEEEhH
Confidence 45688899998888999988777799999999999999998854
No 351
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=94.02 E-value=0.3 Score=45.05 Aligned_cols=89 Identities=15% Similarity=0.100 Sum_probs=61.6
Q ss_pred CceEEeeec-------CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCC
Q 021739 64 IRFFQLYVT-------KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTD 136 (308)
Q Consensus 64 ~~~~Ql~~~-------~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~ 136 (308)
+.++-+.+. .+.+...++++.+++.|++.|.++.+...... ..|
T Consensus 227 pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~---------~~~-------------------- 277 (363)
T 3l5l_A 227 PLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDT---------NIP-------------------- 277 (363)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCC---------CCC--------------------
T ss_pred eEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCcccccc---------ccC--------------------
Confidence 567766532 23456677888899999999998864211100 000
Q ss_pred CchhhhHhhhhcccccCHHHHHHHHHhcCCCEEEEecC-CHHHHHHHHHcC-CcEEEE
Q 021739 137 DSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL-TAEDASLAIQYG-AAGIIV 192 (308)
Q Consensus 137 ~~~~~~~~~~~~d~~~~~~~i~~ir~~~~~Pv~vK~~~-~~e~a~~~~~~G-~d~i~v 192 (308)
..+.+.++.++++|+.+++||+.-+.. +++++..+.+.| +|.|.+
T Consensus 278 -----------~~~~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD~V~i 324 (363)
T 3l5l_A 278 -----------WGPAFMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQLDLVSV 324 (363)
T ss_dssp -----------CCTTTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCSEEEC
T ss_pred -----------CCcchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCccEEEe
Confidence 012234678899999999999887764 799999999999 999975
No 352
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=94.00 E-value=1.5 Score=38.73 Aligned_cols=99 Identities=16% Similarity=0.110 Sum_probs=64.1
Q ss_pred cccCHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccC----CCCCcchHHHH-HH---HHHHccCCC
Q 021739 150 RSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ----LDYVPATVMAL-EE---VVQAAKGRV 221 (308)
Q Consensus 150 ~~~~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~----~~~~~~~~~~l-~~---i~~~~~~~i 221 (308)
...+...++++++. +-|+.+-...+.-.|+.+.++|+|.|.++...+.. .+..+-+++.+ .. +.+.. .+.
T Consensus 14 ~~~t~~~lr~~~~~-g~~i~m~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~-~~~ 91 (275)
T 3vav_A 14 PAVTVPKLQAMREA-GEKIAMLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQ-PRA 91 (275)
T ss_dssp CCCCHHHHHHHHHH-TCCEEEEECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTC-CSS
T ss_pred CCcCHHHHHHHHHC-CCcEEEEeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcC-CCC
Confidence 34566777777654 56888777888999999999999999543222110 12234444433 32 32222 358
Q ss_pred eEEEec---CCCCHHHHH----HHHHcCCCEEEEch
Q 021739 222 PVFLDG---GVRRGTDVF----KALALGASGVFVGR 250 (308)
Q Consensus 222 pvia~G---GI~~~~d~~----k~l~~GAd~V~ig~ 250 (308)
||+++- |..+++++. +.+..||++|-+-.
T Consensus 92 ~vvaD~pfgsY~s~~~a~~~a~rl~kaGa~aVklEd 127 (275)
T 3vav_A 92 LIVADLPFGTYGTPADAFASAVKLMRAGAQMVKFEG 127 (275)
T ss_dssp EEEEECCTTSCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 999985 456888875 55668999998753
No 353
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=93.89 E-value=0.11 Score=45.92 Aligned_cols=42 Identities=26% Similarity=0.222 Sum_probs=36.1
Q ss_pred CHHHHHHHHHhcCCCEEEEecC-CHHHHHHHHHcCCcEEEEec
Q 021739 153 NWKDVKWLQTITSLPILVKGVL-TAEDASLAIQYGAAGIIVSN 194 (308)
Q Consensus 153 ~~~~i~~ir~~~~~Pv~vK~~~-~~e~a~~~~~~G~d~i~v~~ 194 (308)
..+.++++|+.+++||.+.... ++++++.+.++|+|++++..
T Consensus 194 ~~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~~~gADgvVVGS 236 (267)
T 3vnd_A 194 IENILTQLAEFNAPPPLLGFGIAEPEQVRAAIKAGAAGAISGS 236 (267)
T ss_dssp HHHHHHHHHTTTCCCEEECSSCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECH
Confidence 4578999999889999998764 69999989999999999853
No 354
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=93.80 E-value=0.23 Score=46.70 Aligned_cols=101 Identities=17% Similarity=0.219 Sum_probs=65.7
Q ss_pred C-ceEEeeecCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhh
Q 021739 64 I-RFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLAS 142 (308)
Q Consensus 64 ~-~~~Ql~~~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~ 142 (308)
| .++.+-++-+.+.+.++++.++++|+++|.++=.+. . |. ++. ......+.
T Consensus 270 P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~-~--r~-dl~--------------------~~~~~~GG---- 321 (415)
T 3i65_A 270 PLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTT-Q--IN-DIK--------------------SFENKKGG---- 321 (415)
T ss_dssp CEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBS-C--CC-CCG--------------------GGTTCCSE----
T ss_pred CeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCc-c--cc-ccc--------------------ccccccCC----
Confidence 6 688887666666788999999999999987752111 0 10 000 00000000
Q ss_pred HhhhhcccccCHHHHHHHHHhc--CCCEEEEe-cCCHHHHHHHHHcCCcEEEEe
Q 021739 143 YVANQIDRSLNWKDVKWLQTIT--SLPILVKG-VLTAEDASLAIQYGAAGIIVS 193 (308)
Q Consensus 143 ~~~~~~d~~~~~~~i~~ir~~~--~~Pv~vK~-~~~~e~a~~~~~~G~d~i~v~ 193 (308)
++...+.+.+++.|+++++.+ ++||+.-+ +.+.+++.++..+|||+|.+.
T Consensus 322 -lSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aGAd~VqIg 374 (415)
T 3i65_A 322 -VSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLY 374 (415)
T ss_dssp -EEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHTEEEEEES
T ss_pred -cCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 010012234578899999988 79987654 578999999999999999874
No 355
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=93.69 E-value=0.19 Score=48.25 Aligned_cols=68 Identities=21% Similarity=0.263 Sum_probs=52.6
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 249 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig 249 (308)
.+.+..+.++|+|.|.++...|. ....++.+.++++.++ ++||++ |++.+.+++.++.++|||++.+|
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~~G~----~~~~~e~i~~i~~~~p-~~pvi~-g~~~t~e~a~~l~~~G~d~I~v~ 306 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTAHGH----SRRVIETLEMIKADYP-DLPVVA-GNVATPEGTEALIKAGADAVKVG 306 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCS----SHHHHHHHHHHHHHCT-TSCEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhCCCEEEEEecCCc----hHHHHHHHHHHHHHCC-CceEEe-CCcCCHHHHHHHHHcCCCEEEEc
Confidence 56789999999999998543221 1235677788877663 588887 67889999999999999999984
No 356
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=93.69 E-value=3.6 Score=36.54 Aligned_cols=179 Identities=15% Similarity=0.144 Sum_probs=106.6
Q ss_pred ceEeccccCcccCCCHHHHHHHHHHHHcCCceee--cC---CCCCCHHHHhc-------c-CCC-CceEEeeecCCchHH
Q 021739 13 PIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVSS-------T-GPG-IRFFQLYVTKHRNVD 78 (308)
Q Consensus 13 Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~--s~---~~~~~~e~i~~-------~-~~~-~~~~Ql~~~~d~~~~ 78 (308)
|.++.||. .+-.+.++-..+.+-..+.|+...+ ++ ..+.+.+|..+ . ... +.+.... ..+.+..
T Consensus 7 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 84 (294)
T 2ehh_A 7 VALITPFK-EGEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTG-GNATHEA 84 (294)
T ss_dssp EECCCCEE-TTEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSCHHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHH
Confidence 56678887 5545665556777777788886543 33 23556655332 1 222 5566654 3466777
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHH
Q 021739 79 AQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVK 158 (308)
Q Consensus 79 ~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~ 158 (308)
.++.+.+++.|++++.+. .|... + . .++- ..+..+
T Consensus 85 i~la~~A~~~Gadavlv~--~P~y~--------------~-------------------~-s~~~---------l~~~f~ 119 (294)
T 2ehh_A 85 VHLTAHAKEVGADGALVV--VPYYN--------------K-------------------P-TQRG---------LYEHFK 119 (294)
T ss_dssp HHHHHHHHHTTCSEEEEE--CCCSS--------------C-------------------C-CHHH---------HHHHHH
T ss_pred HHHHHHHHhcCCCEEEEC--CCCCC--------------C-------------------C-CHHH---------HHHHHH
Confidence 788899999999998765 34320 0 0 0111 134567
Q ss_pred HHHHhcCCCEEEEec-------CCHHHHHHHH-Hc-CCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCC
Q 021739 159 WLQTITSLPILVKGV-------LTAEDASLAI-QY-GAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 229 (308)
Q Consensus 159 ~ir~~~~~Pv~vK~~-------~~~e~a~~~~-~~-G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI 229 (308)
+|.+.+++||++=.. ++++...++. +. .+-+|.-+. .+...+.++.+..++++.|+ +|.
T Consensus 120 ~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiKds~----------gd~~~~~~~~~~~~~~f~v~-~G~- 187 (294)
T 2ehh_A 120 TVAQEVDIPIIIYNIPSRTCVEISVDTMFKLASECENIVASKEST----------PNMDRISEIVKRLGESFSVL-SGD- 187 (294)
T ss_dssp HHHHHCCSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECC----------SCHHHHHHHHHHHCTTSEEE-ESS-
T ss_pred HHHHhcCCCEEEEeCCcccCcCCCHHHHHHHHhhCCCEEEEEeCC----------CCHHHHHHHHHhcCCCeEEE-ECc-
Confidence 788888999987543 5778887777 53 233333211 12344445544444455554 442
Q ss_pred CCHHHHHHHHHcCCCEEEEchHH
Q 021739 230 RRGTDVFKALALGASGVFVGRPV 252 (308)
Q Consensus 230 ~~~~d~~k~l~~GAd~V~ig~~~ 252 (308)
-..+..++.+|++++.-+..-
T Consensus 188 --d~~~~~~l~~G~~G~is~~an 208 (294)
T 2ehh_A 188 --DSLTLPMMALGAKGVISVANN 208 (294)
T ss_dssp --GGGHHHHHHTTCCEEEESGGG
T ss_pred --HHHHHHHHHCCCCEEEeCHHH
Confidence 234667889999999888753
No 357
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=93.67 E-value=0.34 Score=46.01 Aligned_cols=101 Identities=16% Similarity=0.220 Sum_probs=65.3
Q ss_pred C-ceEEeeecCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhh
Q 021739 64 I-RFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLAS 142 (308)
Q Consensus 64 ~-~~~Ql~~~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~ 142 (308)
| .++.+-+..+.+.+.++++.++++|+++|.++-.+.. +. ++. .+....+.-.+.
T Consensus 298 P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~---~~-d~~--------------------~~~~~~GGlSG~ 353 (443)
T 1tv5_A 298 PLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQ---IN-DIK--------------------SFENKKGGVSGA 353 (443)
T ss_dssp CEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSC---CC-CCG--------------------GGTTCCSEEEEH
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcc---cc-ccc--------------------ccccccCCcCCC
Confidence 6 6888765555667888899999999999988633210 00 000 000000000011
Q ss_pred HhhhhcccccCHHHHHHHHHhc--CCCEEEE-ecCCHHHHHHHHHcCCcEEEEe
Q 021739 143 YVANQIDRSLNWKDVKWLQTIT--SLPILVK-GVLTAEDASLAIQYGAAGIIVS 193 (308)
Q Consensus 143 ~~~~~~d~~~~~~~i~~ir~~~--~~Pv~vK-~~~~~e~a~~~~~~G~d~i~v~ 193 (308)
.+ .+..++.++++++.+ ++||+.- ++.+.+++..+..+|||+|.+.
T Consensus 354 ~~-----~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~aGAd~Vqig 402 (443)
T 1tv5_A 354 KL-----KDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLY 402 (443)
T ss_dssp HH-----HHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTTEEEEEES
T ss_pred cc-----hHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 11 123578899999988 8998765 4578999999999999999874
No 358
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=93.67 E-value=0.27 Score=45.77 Aligned_cols=90 Identities=6% Similarity=-0.066 Sum_probs=62.3
Q ss_pred ccCHHHHHHHHHhc--CCCEEEEec--CCHHHH----HHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHcc---C
Q 021739 151 SLNWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAK---G 219 (308)
Q Consensus 151 ~~~~~~i~~ir~~~--~~Pv~vK~~--~~~e~a----~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~---~ 219 (308)
+...+.++++|+.+ +++|.+-.. .+.+++ +.+.+.|+++|.= ... .+++.+.++++.+. .
T Consensus 185 ~~~~e~v~avR~~~g~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE~------P~~---~d~~~~~~l~~~l~~~g~ 255 (392)
T 3p3b_A 185 KRDIAIVRGISEVAGPAGKIMIDANNAYNLNLTKEVLAALSDVNLYWLEE------AFH---EDEALYEDLKEWLGQRGQ 255 (392)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHHHTTTSCEEEEEC------SSS---CCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEec------CCc---ccHHHHHHHHHhhccCCC
Confidence 33467899999875 688887543 456554 4455567666531 111 35666777776610 2
Q ss_pred CCeEEEecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 220 RVPVFLDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 220 ~ipvia~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
++||++++ +.+..++.++++.| +|.|++=-
T Consensus 256 ~iPIa~dE-~~~~~~~~~~i~~~~~d~v~ik~ 286 (392)
T 3p3b_A 256 NVLIADGE-GLASPHLIEWATRGRVDVLQYDI 286 (392)
T ss_dssp CCEEEECC-SSCCTTHHHHHHTTSCCEECCBT
T ss_pred CccEEecC-CCCHHHHHHHHHcCCCCEEEeCc
Confidence 79999999 99999999999988 89888743
No 359
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=93.65 E-value=0.14 Score=44.97 Aligned_cols=40 Identities=15% Similarity=0.260 Sum_probs=34.2
Q ss_pred HHHHHHHHH-hcC-CCEEEEe-cCCHHHHHHHHHcCCcEEEEe
Q 021739 154 WKDVKWLQT-ITS-LPILVKG-VLTAEDASLAIQYGAAGIIVS 193 (308)
Q Consensus 154 ~~~i~~ir~-~~~-~Pv~vK~-~~~~e~a~~~~~~G~d~i~v~ 193 (308)
.+.++.+++ ..+ +||++-. +.+++++..+.+.|+|+|.+.
T Consensus 165 ~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVg 207 (268)
T 2htm_A 165 RALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLVN 207 (268)
T ss_dssp HHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 567899998 678 9999875 478999999999999999874
No 360
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=93.64 E-value=1.5 Score=40.67 Aligned_cols=88 Identities=8% Similarity=-0.042 Sum_probs=65.7
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEE
Q 021739 153 NWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 224 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvi 224 (308)
..+.++++|+.+ ++++.+... .+.++ ++.+.+.|+++|. +. -.+..++.+.++++.+ .+||.
T Consensus 185 ~~~~v~avReavG~d~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE-------eP-~~~~d~~~~~~l~~~~--~iPIa 254 (388)
T 3tcs_A 185 TEEIIPTMRRELGDDVDLLIDANSCYTPDRAIEVGHMLQDHGFCHFE-------EP-CPYWELAQTKQVTDAL--DIDVT 254 (388)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHHHTTCCEEE-------CC-SCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCeEEE-------CC-CCccCHHHHHHHHHhc--CCCEE
Confidence 346789999986 678888754 45554 4677788988884 10 0122467777887766 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 225 LDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 225 a~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
++..+.+..|+.++++.| +|.+++--
T Consensus 255 ~dE~~~~~~~~~~~i~~~a~d~v~~d~ 281 (388)
T 3tcs_A 255 GGEQDCDLPTWQRMIDMRAVDIVQPDI 281 (388)
T ss_dssp ECTTCCCHHHHHHHHHHTCCSEECCCH
T ss_pred cCCccCCHHHHHHHHHcCCCCEEEeCc
Confidence 999999999999999987 88888764
No 361
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=93.58 E-value=0.91 Score=37.88 Aligned_cols=44 Identities=16% Similarity=0.367 Sum_probs=37.6
Q ss_pred ccCHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEec
Q 021739 151 SLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSN 194 (308)
Q Consensus 151 ~~~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~ 194 (308)
...|+.++++++..++|+++-+..+++++..+.++|+|++.++.
T Consensus 148 ~~~~~~l~~l~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs 191 (215)
T 1xi3_A 148 VIGLEGLRKIVESVKIPVVAIGGINKDNAREVLKTGVDGIAVIS 191 (215)
T ss_dssp CCHHHHHHHHHHHCSSCEEEESSCCTTTHHHHHTTTCSEEEESH
T ss_pred CcCHHHHHHHHHhCCCCEEEECCcCHHHHHHHHHcCCCEEEEhH
Confidence 34688899998888999999887788899999999999998754
No 362
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=93.58 E-value=1.3 Score=41.09 Aligned_cols=122 Identities=16% Similarity=0.126 Sum_probs=83.6
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
..+++.+.+.+++..+.|++.+-+.++++... .+++
T Consensus 143 ~~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~--------------------------------------------~~~~ 178 (386)
T 3fv9_G 143 GDTPEAMRAKVARHRAQGFKGHSIKIGASEAE--------------------------------------------GGPA 178 (386)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCCCTTT--------------------------------------------THHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEeccCCCCC--------------------------------------------CCHH
Confidence 45677777777777888999998887654210 0122
Q ss_pred cCHHHHHHHHHhc--CCCEEEEec--CCHHHHHHHHH-----cCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCe
Q 021739 152 LNWKDVKWLQTIT--SLPILVKGV--LTAEDASLAIQ-----YGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVP 222 (308)
Q Consensus 152 ~~~~~i~~ir~~~--~~Pv~vK~~--~~~e~a~~~~~-----~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 222 (308)
...+.++++|+.+ ++++.+... .+.+++.++.+ .++ +|. + -.++++.+.++++.+ .+|
T Consensus 179 ~d~~~v~avR~a~G~~~~L~vDaN~~~~~~~A~~~~~~l~~~~~i-~iE-------e---P~~~~~~~~~l~~~~--~iP 245 (386)
T 3fv9_G 179 LDAERITACLADRQPGEWYLADANNGLTVEHALRMLSLLPPGLDI-VLE-------A---PCASWAETKSLRARC--ALP 245 (386)
T ss_dssp HHHHHHHHHTTTCCTTCEEEEECTTCCCHHHHHHHHHHSCSSCCC-EEE-------C---CCSSHHHHHHHHTTC--CSC
T ss_pred HHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHhhccCCc-EEe-------c---CCCCHHHHHHHHhhC--CCC
Confidence 2356789999886 578888754 56666654432 233 332 1 112566667766554 799
Q ss_pred EEEecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 223 VFLDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 223 via~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
|.++..+.+..|+.+++..| +|.|++--
T Consensus 246 Ia~dE~~~~~~~~~~~~~~~a~d~v~~k~ 274 (386)
T 3fv9_G 246 LLLDELIQTETDLIAAIRDDLCDGVGLKV 274 (386)
T ss_dssp EEESTTCCSHHHHHHHHHTTCCSEEEEEH
T ss_pred EEeCCCcCCHHHHHHHHHhCCCCEEEECc
Confidence 99999999999999999987 89998854
No 363
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=93.57 E-value=3.8 Score=36.50 Aligned_cols=179 Identities=14% Similarity=0.143 Sum_probs=107.6
Q ss_pred CceEeccccCcccCCCHHHHHHHHHHHHcCCceeec--C---CCCCCHHHHhc--------cCC-C-CceEEeeecCCch
Q 021739 12 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLS--S---WATSSVEEVSS--------TGP-G-IRFFQLYVTKHRN 76 (308)
Q Consensus 12 ~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s--~---~~~~~~e~i~~--------~~~-~-~~~~Ql~~~~d~~ 76 (308)
.|.++.|| -.+-.+.+.-..+.+-..+.|+...+- + ..+.+.+|..+ ... . +.+.... ..+.+
T Consensus 13 ~~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg-~~~t~ 90 (301)
T 3m5v_A 13 MTALITPF-KNGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAG-SNATH 90 (301)
T ss_dssp EEECCCCE-ETTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECC-CSSHH
T ss_pred eEeeecCc-CCCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCC-CCCHH
Confidence 35677777 443345555566777777889865442 2 23456655332 122 2 5566554 34677
Q ss_pred HHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHH
Q 021739 77 VDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKD 156 (308)
Q Consensus 77 ~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 156 (308)
...++.+.+++.|++++.+. .|... + . .++- ..+.
T Consensus 91 ~ai~la~~a~~~Gadavlv~--~P~y~--------------~-------------------~-s~~~---------l~~~ 125 (301)
T 3m5v_A 91 EAVGLAKFAKEHGADGILSV--APYYN--------------K-------------------P-TQQG---------LYEH 125 (301)
T ss_dssp HHHHHHHHHHHTTCSEEEEE--CCCSS--------------C-------------------C-CHHH---------HHHH
T ss_pred HHHHHHHHHHHcCCCEEEEc--CCCCC--------------C-------------------C-CHHH---------HHHH
Confidence 78888899999999998765 35320 0 0 0111 1356
Q ss_pred HHHHHHhcCCCEEEEec-------CCHHHHHHHHHc--CCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEec
Q 021739 157 VKWLQTITSLPILVKGV-------LTAEDASLAIQY--GAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDG 227 (308)
Q Consensus 157 i~~ir~~~~~Pv~vK~~-------~~~e~a~~~~~~--G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~G 227 (308)
.++|.+.+++||++=.+ ++++...++.+. .+-+|.-+. .+...+.++.+.. .++.|+ +|
T Consensus 126 f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiKdss----------gd~~~~~~~~~~~-~~f~v~-~G 193 (301)
T 3m5v_A 126 YKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDCENIYGVKEAS----------GNIDKCVDLLAHE-PRMMLI-SG 193 (301)
T ss_dssp HHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECS----------SCHHHHHHHHHHC-TTSEEE-EC
T ss_pred HHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHhcCCCEEEEEeCC----------CCHHHHHHHHHhC-CCeEEE-Ec
Confidence 78888888999987543 567888777765 333443221 1344455555554 456554 34
Q ss_pred CCCCHHHHHHHHHcCCCEEEEchHH
Q 021739 228 GVRRGTDVFKALALGASGVFVGRPV 252 (308)
Q Consensus 228 GI~~~~d~~k~l~~GAd~V~ig~~~ 252 (308)
. ...+..++.+|++++.-+..-
T Consensus 194 ~---d~~~~~~l~~G~~G~is~~~n 215 (301)
T 3m5v_A 194 E---DAINYPILSNGGKGVISVTSN 215 (301)
T ss_dssp C---GGGHHHHHHTTCCEEEESGGG
T ss_pred c---HHHHHHHHHcCCCEEEehHHH
Confidence 2 234677889999999877643
No 364
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=93.56 E-value=4.1 Score=36.87 Aligned_cols=183 Identities=14% Similarity=0.007 Sum_probs=104.9
Q ss_pred ceEeccccCcccCCCHHHHHHHHHHHHcCCceee--cC---CCCCCHHHHhc-------c-CCC-CceEEeeecCCchHH
Q 021739 13 PIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVSS-------T-GPG-IRFFQLYVTKHRNVD 78 (308)
Q Consensus 13 Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~--s~---~~~~~~e~i~~-------~-~~~-~~~~Ql~~~~d~~~~ 78 (308)
|.++.||.-.+-.+.+.-..+.+-..+.|+...+ ++ ..+.+.+|..+ . ... +.+.... ..+.+..
T Consensus 40 ~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~ea 118 (332)
T 2r8w_A 40 AFPITPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIG-ALRTDEA 118 (332)
T ss_dssp ECCCCCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC-CSSHHHH
T ss_pred EEeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHH
Confidence 5556777533334555556677777778876543 33 23556655331 1 222 5666665 4466777
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHH
Q 021739 79 AQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVK 158 (308)
Q Consensus 79 ~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~ 158 (308)
.++.+.+++.|++++.+. .|... + . .++- ..+..+
T Consensus 119 i~la~~A~~~Gadavlv~--~P~Y~--------------~-------------------~-s~~~---------l~~~f~ 153 (332)
T 2r8w_A 119 VALAKDAEAAGADALLLA--PVSYT--------------P-------------------L-TQEE---------AYHHFA 153 (332)
T ss_dssp HHHHHHHHHHTCSEEEEC--CCCSS--------------C-------------------C-CHHH---------HHHHHH
T ss_pred HHHHHHHHhcCCCEEEEC--CCCCC--------------C-------------------C-CHHH---------HHHHHH
Confidence 788899999999998664 34320 0 0 0111 135567
Q ss_pred HHHHhcCCCEEEEec-------CCHHHHHHHHHcC-CcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCC
Q 021739 159 WLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGV 229 (308)
Q Consensus 159 ~ir~~~~~Pv~vK~~-------~~~e~a~~~~~~G-~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI 229 (308)
.|.+.+++||++=.+ ++++...++.+.. +-+|.-+. + .. ..+..+.++.+..+.++.|+ +|
T Consensus 154 ~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~pnIvgiKdss--g-----d~~~~~~~~~~l~~~~~~~f~v~-~G-- 223 (332)
T 2r8w_A 154 AVAGATALPLAIYNNPTTTRFTFSDELLVRLAYIPNIRAIKMPL--P-----ADADYAGELARLRPKLSDDFAIG-YS-- 223 (332)
T ss_dssp HHHHHCSSCEEEECCHHHHCCCCCHHHHHHHHTSTTEEEEEECC--C-----TTCCHHHHHHHHTTTSCTTCEEE-EC--
T ss_pred HHHHhcCCCEEEEeCccccCcCCCHHHHHHHHcCCCEEEEEeCC--C-----CchhHHHHHHHHHHhcCCCEEEE-eC--
Confidence 788888999987542 5678887777532 22332211 1 10 01444455543333344444 34
Q ss_pred CCHHHHHHHHHcCCCEEEEchHH
Q 021739 230 RRGTDVFKALALGASGVFVGRPV 252 (308)
Q Consensus 230 ~~~~d~~k~l~~GAd~V~ig~~~ 252 (308)
+...+...+.+|++++.-+..-
T Consensus 224 -~D~~~l~~l~~G~~G~is~~an 245 (332)
T 2r8w_A 224 -GDWGCTDATLAGGDTWYSVVAG 245 (332)
T ss_dssp -CHHHHHHHHHTTCSEEEESGGG
T ss_pred -chHHHHHHHHCCCCEEEeCHHH
Confidence 3456778889999999888644
No 365
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=93.55 E-value=0.18 Score=43.79 Aligned_cols=64 Identities=25% Similarity=0.350 Sum_probs=42.1
Q ss_pred HHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHH----------HHHHHHcCCCEEE
Q 021739 178 DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTD----------VFKALALGASGVF 247 (308)
Q Consensus 178 ~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d----------~~k~l~~GAd~V~ 247 (308)
.++.+.++|+|+++++.+ ....+++.++.+ .++.+.||+-..+ ..+++.+|||.+.
T Consensus 149 ~A~~a~~~g~~GvV~s~~-------------e~~~ir~~~~~~-fl~vtPGIr~~g~~~~dQ~rv~t~~~~~~aGad~lV 214 (239)
T 3tr2_A 149 MATLAKSAGLDGVVCSAQ-------------EAALLRKQFDRN-FLLVTPGIRLETDEKGDQKRVMTPRAAIQAGSDYLV 214 (239)
T ss_dssp HHHHHHHHTCCEEECCHH-------------HHHHHHTTCCTT-SEEEECCBC----------CCBCHHHHHHHTCSEEE
T ss_pred HHHHHHHcCCCEEEECch-------------hHHHHHHhcCCC-cEEECCCcCCCCCCcCcccccCCHHHHHHcCCCEEE
Confidence 456677889999986431 223344444333 3778889974332 5578889999999
Q ss_pred EchHHHHh
Q 021739 248 VGRPVPFS 255 (308)
Q Consensus 248 ig~~~l~~ 255 (308)
+||+++.+
T Consensus 215 vGr~I~~a 222 (239)
T 3tr2_A 215 IGRPITQS 222 (239)
T ss_dssp ECHHHHTS
T ss_pred EChHHhCC
Confidence 99998864
No 366
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=93.53 E-value=3.8 Score=36.32 Aligned_cols=180 Identities=14% Similarity=0.125 Sum_probs=104.2
Q ss_pred CceEeccccCcccCCCHHHHHHHHHHHHcCCceee--cC---CCCCCHHHHhc-------c-CCC-CceEEeeecCCchH
Q 021739 12 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVSS-------T-GPG-IRFFQLYVTKHRNV 77 (308)
Q Consensus 12 ~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~--s~---~~~~~~e~i~~-------~-~~~-~~~~Ql~~~~d~~~ 77 (308)
.|.++.||.-.+ .+.+.-..+.+-..+.|+...+ ++ ..+.+.+|..+ . ... +.+.... ..+.+.
T Consensus 7 ~~a~vTPf~~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg-~~~t~~ 84 (291)
T 3a5f_A 7 GVAIITPFTNTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTG-SNNTAA 84 (291)
T ss_dssp EEECCCCBCSSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHH
T ss_pred eeeeEcCcCCCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHH
Confidence 366778886555 6666666777777888986543 32 24556655332 1 222 5666664 446677
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHH
Q 021739 78 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 157 (308)
Q Consensus 78 ~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 157 (308)
..++.+.+++.|++++.+. .|...+ | .++- ..+..
T Consensus 85 ai~la~~a~~~Gadavlv~--~P~y~~-----------~-----------------------s~~~---------l~~~f 119 (291)
T 3a5f_A 85 SIAMSKWAESIGVDGLLVI--TPYYNK-----------T-----------------------TQKG---------LVKHF 119 (291)
T ss_dssp HHHHHHHHHHTTCSEEEEE--CCCSSC-----------C-----------------------CHHH---------HHHHC
T ss_pred HHHHHHHHHhcCCCEEEEc--CCCCCC-----------C-----------------------CHHH---------HHHHH
Confidence 7888899999999998765 353210 0 0111 12344
Q ss_pred HHHHHhcCCCEEEEec-------CCHHHHHHHHHcC-CcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCC
Q 021739 158 KWLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 229 (308)
Q Consensus 158 ~~ir~~~~~Pv~vK~~-------~~~e~a~~~~~~G-~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI 229 (308)
+.|.+.+++||++=.. ++++...++.+.. +-+|.-+. .+...+.++.+..++++.| .+|.
T Consensus 120 ~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK~s~----------gd~~~~~~~~~~~~~~f~v-~~G~- 187 (291)
T 3a5f_A 120 KAVSDAVSTPIIIYNVPGRTGLNITPGTLKELCEDKNIVAVXEAS----------GNISQIAQIKALCGDKLDI-YSGN- 187 (291)
T ss_dssp -CTGGGCCSCEEEEECHHHHSCCCCHHHHHHHTTSTTEEEEEECS----------CCHHHHHHHHHHHGGGSEE-EESC-
T ss_pred HHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEEEeCCC----------CCHHHHHHHHHhcCCCeEE-EeCc-
Confidence 5666677899887542 5677777776532 22332111 1233444444444334555 3442
Q ss_pred CCHHHHHHHHHcCCCEEEEchHH
Q 021739 230 RRGTDVFKALALGASGVFVGRPV 252 (308)
Q Consensus 230 ~~~~d~~k~l~~GAd~V~ig~~~ 252 (308)
-..+..++.+|++++.-+..-
T Consensus 188 --d~~~~~~l~~G~~G~is~~an 208 (291)
T 3a5f_A 188 --DDQIIPILALGGIGVISVLAN 208 (291)
T ss_dssp --GGGHHHHHHTTCCEEEESGGG
T ss_pred --HHHHHHHHHCCCCEEEecHHH
Confidence 234667888999999888753
No 367
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=93.52 E-value=1.1 Score=37.44 Aligned_cols=87 Identities=17% Similarity=0.053 Sum_probs=55.0
Q ss_pred HHHHHHHHh-cCCCEEEEe--cCCHHH-HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEe-cCC
Q 021739 155 KDVKWLQTI-TSLPILVKG--VLTAED-ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLD-GGV 229 (308)
Q Consensus 155 ~~i~~ir~~-~~~Pv~vK~--~~~~e~-a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~-GGI 229 (308)
+.++++|+. .++||.+-. ....+. ++.+.++|+|+|.++... .......+.+..+.. .++++.+ -+.
T Consensus 42 ~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~~------~~~~~~~~~~~~~~~--g~~~~v~~~~~ 113 (211)
T 3f4w_A 42 NAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVT------DVLTIQSCIRAAKEA--GKQVVVDMICV 113 (211)
T ss_dssp HHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTS------CHHHHHHHHHHHHHH--TCEEEEECTTC
T ss_pred HHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEeCCC------ChhHHHHHHHHHHHc--CCeEEEEecCC
Confidence 678999987 588986533 333444 899999999999986432 111222222222222 4566553 445
Q ss_pred CCH-HHHHHHHHcCCCEEEEc
Q 021739 230 RRG-TDVFKALALGASGVFVG 249 (308)
Q Consensus 230 ~~~-~d~~k~l~~GAd~V~ig 249 (308)
.++ +.+.++..+|+|.+.+.
T Consensus 114 ~t~~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 114 DDLPARVRLLEEAGADMLAVH 134 (211)
T ss_dssp SSHHHHHHHHHHHTCCEEEEE
T ss_pred CCHHHHHHHHHHcCCCEEEEc
Confidence 666 44677778999998775
No 368
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=93.51 E-value=1.7 Score=38.37 Aligned_cols=73 Identities=15% Similarity=0.118 Sum_probs=50.0
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
.|.+...+..++..+.|++.|+|+...+... +.+.
T Consensus 31 ~~~~~a~~~a~~~v~~GAdiIDIg~~s~~~e---------------------------------------------E~~r 65 (271)
T 2yci_X 31 KDPRPIQEWARRQAEKGAHYLDVNTGPTADD---------------------------------------------PVRV 65 (271)
T ss_dssp TCCHHHHHHHHHHHHTTCSEEEEECCSCSSC---------------------------------------------HHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCchh---------------------------------------------HHHH
Confidence 3566666667777789999999997643210 0011
Q ss_pred CHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHc--CCcEEE
Q 021739 153 NWKDVKWLQTITSLPILVKGVLTAEDASLAIQY--GAAGII 191 (308)
Q Consensus 153 ~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~--G~d~i~ 191 (308)
....|+.+++.+++||++ ....++.++.+.++ |++.|.
T Consensus 66 v~~vi~~l~~~~~~pisI-DT~~~~v~~aal~a~~Ga~iIN 105 (271)
T 2yci_X 66 MEWLVKTIQEVVDLPCCL-DSTNPDAIEAGLKVHRGHAMIN 105 (271)
T ss_dssp HHHHHHHHHHHCCCCEEE-ECSCHHHHHHHHHHCCSCCEEE
T ss_pred HHHHHHHHHHhCCCeEEE-eCCCHHHHHHHHHhCCCCCEEE
Confidence 124677777777888876 45678888888888 888774
No 369
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=93.51 E-value=0.33 Score=44.06 Aligned_cols=81 Identities=16% Similarity=0.106 Sum_probs=59.5
Q ss_pred HHHHHHHHHhcCCCEEEEecC-C---HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCC
Q 021739 154 WKDVKWLQTITSLPILVKGVL-T---AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 229 (308)
Q Consensus 154 ~~~i~~ir~~~~~Pv~vK~~~-~---~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI 229 (308)
.+.++++++.++.|+.+.... + .+.++.+.+.|+|.|.++.. .+ ...+..+++ . .++++. ++
T Consensus 66 ~~~i~~i~~~~~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~g--------~p-~~~~~~l~~-~--g~~v~~--~v 131 (326)
T 3bo9_A 66 RKAISELRQKTDKPFGVNIILVSPWADDLVKVCIEEKVPVVTFGAG--------NP-TKYIRELKE-N--GTKVIP--VV 131 (326)
T ss_dssp HHHHHHHHTTCSSCEEEEEETTSTTHHHHHHHHHHTTCSEEEEESS--------CC-HHHHHHHHH-T--TCEEEE--EE
T ss_pred HHHHHHHHHhcCCCEEEEEeccCCCHHHHHHHHHHCCCCEEEECCC--------Cc-HHHHHHHHH-c--CCcEEE--Ec
Confidence 356788888778899888654 2 35678889999999987432 12 334444443 2 577775 67
Q ss_pred CCHHHHHHHHHcCCCEEEE
Q 021739 230 RRGTDVFKALALGASGVFV 248 (308)
Q Consensus 230 ~~~~d~~k~l~~GAd~V~i 248 (308)
.+.+++.++...|||++.+
T Consensus 132 ~s~~~a~~a~~~GaD~i~v 150 (326)
T 3bo9_A 132 ASDSLARMVERAGADAVIA 150 (326)
T ss_dssp SSHHHHHHHHHTTCSCEEE
T ss_pred CCHHHHHHHHHcCCCEEEE
Confidence 8999999999999999988
No 370
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=93.47 E-value=0.61 Score=44.14 Aligned_cols=88 Identities=11% Similarity=-0.019 Sum_probs=65.0
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--CCHHHH----HHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEE
Q 021739 153 NWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 224 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~--~~~e~a----~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvi 224 (308)
..+.++++|+.+ +++|.+... .+.+++ +.+.+.|+++|.= . . .+.++..+.++++.+ .+||+
T Consensus 226 d~~~v~avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe---P---~--~~~d~~~~~~l~~~~--~iPIa 295 (440)
T 3t6c_A 226 IPRLFDHLRNKLGFSVELLHDAHERITPINAIHMAKALEPYQLFFLED---P---V--APENTEWLKMLRQQS--STPIA 295 (440)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEEC---S---S--CGGGGGGHHHHHHHC--CSCEE
T ss_pred HHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHhhhcCCCEEEC---C---C--ChhhHHHHHHHHhhc--CCCEE
Confidence 456789999986 688988864 455554 5566778888851 0 0 112455667777665 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 225 LDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 225 a~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
++..+.+..|+.+++..| +|.|++--
T Consensus 296 ~dE~~~~~~~~~~~i~~~a~d~v~~k~ 322 (440)
T 3t6c_A 296 MGELFVNVNEWKPLIDNKLIDYIRCHI 322 (440)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCCG
T ss_pred eCcccCCHHHHHHHHHcCCccceeech
Confidence 999999999999999987 89888764
No 371
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=93.44 E-value=0.21 Score=45.96 Aligned_cols=110 Identities=15% Similarity=0.012 Sum_probs=64.4
Q ss_pred CCceEEeeecCCchHHHHHHHHHHHcC-CcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhh
Q 021739 63 GIRFFQLYVTKHRNVDAQLVKRAERAG-FKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLA 141 (308)
Q Consensus 63 ~~~~~Ql~~~~d~~~~~~~~~~~~~~g-~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~ 141 (308)
-|.++.+-++.|.+.+.++++.+++.| +++|.++ ++-..+... +++. .-| .+..+ ...+
T Consensus 194 ~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~-NT~~~g~~i-di~~--~~~-~~~~~---------------~~~g 253 (354)
T 4ef8_A 194 HSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCI-NSIGNGLVI-DAET--ESV-VIKPK---------------QGFG 253 (354)
T ss_dssp SCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEEC-CCEEEEECE-ETTT--TEE-SCSGG---------------GGEE
T ss_pred CCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEe-cccCcceee-eccC--Ccc-ccccc---------------cccC
Confidence 488999887777777778888788887 8887652 110000000 0000 000 00000 0000
Q ss_pred hHhhhhcccccCHHHHHHHHHhc-CCCEEEE-ecCCHHHHHHHHHcCCcEEEEe
Q 021739 142 SYVANQIDRSLNWKDVKWLQTIT-SLPILVK-GVLTAEDASLAIQYGAAGIIVS 193 (308)
Q Consensus 142 ~~~~~~~d~~~~~~~i~~ir~~~-~~Pv~vK-~~~~~e~a~~~~~~G~d~i~v~ 193 (308)
. ++...-.+..|+.|+++++.. ++||+.- ++.+.+++.++..+|||+|.+.
T Consensus 254 G-lSG~~i~p~a~~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aGAd~V~vg 306 (354)
T 4ef8_A 254 G-LGGRYVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVG 306 (354)
T ss_dssp E-EEGGGGHHHHHHHHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHTEEEEEEC
T ss_pred C-CCCCCCchHHHHHHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcCCCEEEEh
Confidence 0 010011234688999999886 7998755 4578999999999999999874
No 372
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=93.35 E-value=0.23 Score=43.65 Aligned_cols=64 Identities=22% Similarity=0.348 Sum_probs=44.4
Q ss_pred HHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCH-HH---------HHHHHHcCCCEEE
Q 021739 178 DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRG-TD---------VFKALALGASGVF 247 (308)
Q Consensus 178 ~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~-~d---------~~k~l~~GAd~V~ 247 (308)
.++.+.++|+|+++++. ..+..+++.++.+. ++.+.||+-. .+ ..+++.+|||.+.
T Consensus 167 ~A~~a~~aG~~GvV~sa-------------~e~~~iR~~~g~~f-l~VtPGIr~qg~~~~dQ~Rv~t~~~a~~aGad~iV 232 (255)
T 3ldv_A 167 LATLTKNAGLDGVVCSA-------------QEASLLKQHLGREF-KLVTPGIRPAGSEQGDQRRIMTPAQAIASGSDYLV 232 (255)
T ss_dssp HHHHHHHTTCSEEECCH-------------HHHHHHHHHHCTTS-EEEEECCCCTTSTTSSCSSSCCHHHHHHTTCSEEE
T ss_pred HHHHHHHcCCCEEEECH-------------HHHHHHHHhcCCCc-EEEeCCcccCcCCccceeccCCHHHHHHcCCCEEE
Confidence 45666788999998642 23455555554344 6677888742 22 5677889999999
Q ss_pred EchHHHHh
Q 021739 248 VGRPVPFS 255 (308)
Q Consensus 248 ig~~~l~~ 255 (308)
+||+++.+
T Consensus 233 vGr~I~~a 240 (255)
T 3ldv_A 233 IGRPITQA 240 (255)
T ss_dssp ECHHHHTC
T ss_pred ECHHHhCC
Confidence 99998864
No 373
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=93.35 E-value=0.87 Score=39.18 Aligned_cols=96 Identities=19% Similarity=0.254 Sum_probs=62.2
Q ss_pred ccccCHHHHHHHHHhcCCCEEEEec-C-----C-HHHH----HHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHc
Q 021739 149 DRSLNWKDVKWLQTITSLPILVKGV-L-----T-AEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAA 217 (308)
Q Consensus 149 d~~~~~~~i~~ir~~~~~Pv~vK~~-~-----~-~e~a----~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~ 217 (308)
+.+.+.+.++.+++.+++|++ |-. . . .+++ ..+....+|++.+...||+.. .-+|+.+..+..
T Consensus 99 HG~E~~~~~~~l~~~~~~~vi-Ka~~v~~~~~~~~~~~~~~~~~~~~~~~d~~LlDs~GGtG~---~fDW~~~~~~~~-- 172 (228)
T 4aaj_A 99 HSNALPQTIDTLKKEFGVFVM-KAFRVPTISKNPEEDANRLLSEISRYNADMVLLDTGAGSGK---LHDLRVSSLVAR-- 172 (228)
T ss_dssp CSCCCHHHHHHHHHHHCCEEE-EEEECCSSCSCHHHHHHHHHHHHHHSCCSEEEEEC----------CCCHHHHHHHH--
T ss_pred ccccCHHHHHHHhhccCceEE-EEEEecccccchhhhHHHHHHHHhccCCCEEccCCCCCCcC---cCChHHHHHhhh--
Confidence 334456889999988888876 432 1 1 2232 344556899999887665431 123455544432
Q ss_pred cCCCeEEEecCCCCHHHHHHHHH-cCCCEEEEchHHH
Q 021739 218 KGRVPVFLDGGVRRGTDVFKALA-LGASGVFVGRPVP 253 (308)
Q Consensus 218 ~~~ipvia~GGI~~~~d~~k~l~-~GAd~V~ig~~~l 253 (308)
+.|+|..||+. ++++.+++. .+..+|=+.|.+=
T Consensus 173 --~~p~iLAGGL~-peNV~~Ai~~~~P~gVDVsSGVE 206 (228)
T 4aaj_A 173 --KIPVIVAGGLN-AENVEEVIKVVKPYGVDVSSGVE 206 (228)
T ss_dssp --HSCEEEESSCC-TTTHHHHHHHHCCSEEEESGGGE
T ss_pred --cCCeEEECCCC-HHHHHHHHHHhCCCEEEeCCCCC
Confidence 47999999995 899999987 6999999998763
No 374
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=93.29 E-value=4.3 Score=36.26 Aligned_cols=180 Identities=19% Similarity=0.205 Sum_probs=105.7
Q ss_pred CceEeccccCcccCCCHHHHHHHHHHHHcCCceee--cC---CCCCCHHHHhc-------c-CCC-CceEEeeecCCchH
Q 021739 12 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVSS-------T-GPG-IRFFQLYVTKHRNV 77 (308)
Q Consensus 12 ~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~--s~---~~~~~~e~i~~-------~-~~~-~~~~Ql~~~~d~~~ 77 (308)
.|.++.||. .+-.+.+.-..+.+-..+.|+...+ ++ ..+.+.+|..+ . ... +.+.... ..+.+.
T Consensus 18 ~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg-~~st~~ 95 (306)
T 1o5k_A 18 GTAIVTPFK-NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAG-TNSTEK 95 (306)
T ss_dssp EEECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHH
T ss_pred eeeeecCcC-CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCC-CccHHH
Confidence 356677886 5545665556777777788876443 32 34566655332 1 222 5666654 446677
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHH
Q 021739 78 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 157 (308)
Q Consensus 78 ~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 157 (308)
..++.+.+++.|++++.+. .|... + . .++- ..+..
T Consensus 96 ai~la~~A~~~Gadavlv~--~P~y~--------------~-------------------~-s~~~---------l~~~f 130 (306)
T 1o5k_A 96 TLKLVKQAEKLGANGVLVV--TPYYN--------------K-------------------P-TQEG---------LYQHY 130 (306)
T ss_dssp HHHHHHHHHHHTCSEEEEE--CCCSS--------------C-------------------C-CHHH---------HHHHH
T ss_pred HHHHHHHHHhcCCCEEEEC--CCCCC--------------C-------------------C-CHHH---------HHHHH
Confidence 7888899999999998765 35320 0 0 0111 13456
Q ss_pred HHHHHhcCCCEEEEec-------CCHHHHHHHH-Hc-CCcEEEEecccccCCCCCcchHHHHHHHHHHccC---CCeEEE
Q 021739 158 KWLQTITSLPILVKGV-------LTAEDASLAI-QY-GAAGIIVSNHGARQLDYVPATVMALEEVVQAAKG---RVPVFL 225 (308)
Q Consensus 158 ~~ir~~~~~Pv~vK~~-------~~~e~a~~~~-~~-G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~---~ipvia 225 (308)
++|.+.+++||++=.. ++++...++. +. .+-+|.-+. .+...+.++.+..++ ++.| .
T Consensus 131 ~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiKdss----------gd~~~~~~~~~~~~~~~~~f~v-~ 199 (306)
T 1o5k_A 131 KYISERTDLGIVVYNVPGRTGVNVLPETAARIAADLKNVVGIXEAN----------PDIDQIDRTVSLTKQARSDFMV-W 199 (306)
T ss_dssp HHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECC----------CCHHHHHHHHHHHHHHCTTCEE-E
T ss_pred HHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHHhCCCEEEEeCCC----------CCHHHHHHHHHhcCCCCCcEEE-E
Confidence 7788888999987543 5678887776 53 233333221 123333344333322 4444 3
Q ss_pred ecCCCCHHHHHHHHHcCCCEEEEchHH
Q 021739 226 DGGVRRGTDVFKALALGASGVFVGRPV 252 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~GAd~V~ig~~~ 252 (308)
+|. ...+..++.+|++++.-+.+-
T Consensus 200 ~G~---d~~~l~~l~~G~~G~is~~an 223 (306)
T 1o5k_A 200 SGN---DDRTFYLLCAGGDGVISVVSN 223 (306)
T ss_dssp ESS---GGGHHHHHHHTCCEEEESGGG
T ss_pred ECc---HHHHHHHHHCCCCEEEecHHH
Confidence 442 234777888999999887743
No 375
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=93.27 E-value=0.5 Score=45.26 Aligned_cols=65 Identities=20% Similarity=0.151 Sum_probs=46.5
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 249 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig 249 (308)
.+.+..+.++|+|.+++.+.+|.. ...++.+..+++.. .+|++ .|+|.+.+++..++ |+|.|.+|
T Consensus 230 ~~~a~~l~~~gvd~lvvdta~G~~----~~~L~~I~~l~~~~--~vpvi-~k~v~~~~~a~~l~--G~d~v~vg 294 (486)
T 2cu0_A 230 IKRAIELDKAGVDVIVVDTAHAHN----LKAIKSMKEMRQKV--DADFI-VGNIANPKAVDDLT--FADAVKVG 294 (486)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCCC----HHHHHHHHHHHHTC--CSEEE-EEEECCHHHHTTCT--TSSEEEEC
T ss_pred HHHHHHHHHhcCCceEEEecCCcE----eehhhHHHHHHHHh--CCccc-cCCcCCHHHHHHhh--CCCeEEEe
Confidence 467888999999999887643321 12344556665554 78997 57888999887665 99999984
No 376
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=93.16 E-value=0.93 Score=39.37 Aligned_cols=44 Identities=18% Similarity=0.226 Sum_probs=36.2
Q ss_pred ccCHHHHHHHHHh--cCCCEEEEecCCHHHHHHHHHcCCcEEEEec
Q 021739 151 SLNWKDVKWLQTI--TSLPILVKGVLTAEDASLAIQYGAAGIIVSN 194 (308)
Q Consensus 151 ~~~~~~i~~ir~~--~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~ 194 (308)
...++.++++++. .++|++.=+..+++++..+.++|+|+|.+..
T Consensus 175 ~~gl~~l~~~~~~~~~~iPvvAiGGI~~~ni~~~~~aGa~gvav~s 220 (243)
T 3o63_A 175 APGLGLVRVAAELGGDDKPWFAIGGINAQRLPAVLDAGARRIVVVR 220 (243)
T ss_dssp CCCHHHHHHHHTC---CCCEEEESSCCTTTHHHHHHTTCCCEEESH
T ss_pred hhhHHHHHHHHHhccCCCCEEEecCCCHHHHHHHHHcCCCEEEEeH
Confidence 3457889999876 5899988777799999999999999998754
No 377
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=93.13 E-value=0.25 Score=46.17 Aligned_cols=68 Identities=9% Similarity=0.189 Sum_probs=49.6
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 249 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig 249 (308)
.+.+..+.++|+|+|.+....+. ....++.+.++++.++ ++||++ |++.+.+++.++..+|||++.+|
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~~g~----~~~~~e~i~~ir~~~~-~~pviv-~~v~~~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSAHGH----STRIIELIKKIKTKYP-NLDLIA-GNIVTKEAALDLISVGADCLKVG 222 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCS----SHHHHHHHHHHHHHCT-TCEEEE-EEECSHHHHHHHHTTTCSEEEEC
T ss_pred HHHHHHHHHCCCCEEEEeCCCCC----hHHHHHHHHHHHHHCC-CCeEEE-cCCCcHHHHHHHHhcCCCEEEEC
Confidence 45677888999999988321111 1124566677766652 689987 67889999999999999999993
No 378
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=93.11 E-value=4.5 Score=36.01 Aligned_cols=181 Identities=16% Similarity=0.208 Sum_probs=107.2
Q ss_pred ceEeccccCcccCCCHHHHHHHHHHHHcCCceee--cC---CCCCCHHHHhc-------c-CCC-CceEEeeecCCchHH
Q 021739 13 PIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVSS-------T-GPG-IRFFQLYVTKHRNVD 78 (308)
Q Consensus 13 Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~--s~---~~~~~~e~i~~-------~-~~~-~~~~Ql~~~~d~~~~ 78 (308)
|-++.||.-.+-.+.++-..+.+-..+.|+...+ ++ ..+.+.+|..+ . ... +.+.... ..+.+..
T Consensus 18 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg-~~~t~~a 96 (301)
T 1xky_A 18 TAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTG-SNNTHAS 96 (301)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHH
T ss_pred EeeECcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCC-CCCHHHH
Confidence 5567777543334555556677777788886543 32 23556655331 1 222 5666664 4466777
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHH
Q 021739 79 AQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVK 158 (308)
Q Consensus 79 ~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~ 158 (308)
.++.+.+++.|++++.+. .|... + . .++- ..+..+
T Consensus 97 i~la~~A~~~Gadavlv~--~P~y~--------------~-------------------~-s~~~---------l~~~f~ 131 (301)
T 1xky_A 97 IDLTKKATEVGVDAVMLV--APYYN--------------K-------------------P-SQEG---------MYQHFK 131 (301)
T ss_dssp HHHHHHHHHTTCSEEEEE--CCCSS--------------C-------------------C-CHHH---------HHHHHH
T ss_pred HHHHHHHHhcCCCEEEEc--CCCCC--------------C-------------------C-CHHH---------HHHHHH
Confidence 888899999999998765 34320 0 0 0111 135667
Q ss_pred HHHHhcCCCEEEEec-------CCHHHHHHHHHcC-CcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCC
Q 021739 159 WLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVR 230 (308)
Q Consensus 159 ~ir~~~~~Pv~vK~~-------~~~e~a~~~~~~G-~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~ 230 (308)
.|.+.+++||++=.+ ++++...++.+.. +-+|.-+. .+...+.++.+..+.++.| .+|.
T Consensus 132 ~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKdss----------gd~~~~~~~~~~~~~~f~v-~~G~-- 198 (301)
T 1xky_A 132 AIAESTPLPVMLYNVPGRSIVQISVDTVVRLSEIENIVAIKDAG----------GDVLTMTEIIEKTADDFAV-YSGD-- 198 (301)
T ss_dssp HHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEEEEECS----------SCHHHHHHHHHHSCTTCEE-EESS--
T ss_pred HHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEEEEcCC----------CCHHHHHHHHHhcCCCeEE-EECc--
Confidence 788888999987543 5678887776531 22332211 1244455555554445555 3442
Q ss_pred CHHHHHHHHHcCCCEEEEchHHH
Q 021739 231 RGTDVFKALALGASGVFVGRPVP 253 (308)
Q Consensus 231 ~~~d~~k~l~~GAd~V~ig~~~l 253 (308)
-..+..++.+|++++.-+..-+
T Consensus 199 -d~~~l~~l~~G~~G~is~~an~ 220 (301)
T 1xky_A 199 -DGLTLPAMAVGAKGIVSVASHV 220 (301)
T ss_dssp -GGGHHHHHHTTCCEEEESTHHH
T ss_pred -HHHHHHHHHcCCCEEEcCHHHh
Confidence 2347778899999998887544
No 379
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=93.09 E-value=1.2 Score=41.59 Aligned_cols=86 Identities=12% Similarity=0.052 Sum_probs=63.6
Q ss_pred HHHHHHHHHhc-CCCEEEEec--CCHHHH----HHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEe
Q 021739 154 WKDVKWLQTIT-SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLD 226 (308)
Q Consensus 154 ~~~i~~ir~~~-~~Pv~vK~~--~~~e~a----~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~ 226 (308)
.+.++++|+.+ ++++.+-.. .+.+++ +.+.+.|+++|. + .- +++..+.++++.+ .+||.++
T Consensus 200 ~~~v~avR~~~~~~~l~vDaN~~w~~~~A~~~~~~l~~~~i~~iE-------q--P~-~d~~~~~~l~~~~--~iPIa~d 267 (398)
T 4dye_A 200 VAILRAVREALPGVNLRVDPNAAWSVPDSVRAGIALEELDLEYLE-------D--PC-VGIEGMAQVKAKV--RIPLCTN 267 (398)
T ss_dssp HHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------C--CS-SHHHHHHHHHHHC--CSCEEES
T ss_pred HHHHHHHHHhCCCCeEEeeCCCCCCHHHHHHHHHHHhhcCCCEEc-------C--CC-CCHHHHHHHHhhC--CCCEEeC
Confidence 46788888876 567777643 455554 556678888884 1 11 2667777777765 7999999
Q ss_pred cCCCCHHHHHHHHHcC-CCEEEEchH
Q 021739 227 GGVRRGTDVFKALALG-ASGVFVGRP 251 (308)
Q Consensus 227 GGI~~~~d~~k~l~~G-Ad~V~ig~~ 251 (308)
..+.+..|+.++++.| +|.+++--.
T Consensus 268 E~~~~~~~~~~~i~~~a~d~v~~k~~ 293 (398)
T 4dye_A 268 MCVVRFEDFAPAMRLNAVDVIHGDVY 293 (398)
T ss_dssp SSCCSGGGHHHHHHTTCCSEEEECHH
T ss_pred CcCCCHHHHHHHHHhCCCCEEEeCcc
Confidence 9999999999999987 899988643
No 380
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=93.08 E-value=0.46 Score=43.84 Aligned_cols=41 Identities=20% Similarity=0.050 Sum_probs=35.5
Q ss_pred CHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcC-CcEEEEe
Q 021739 153 NWKDVKWLQTITSLPILVKGVLTAEDASLAIQYG-AAGIIVS 193 (308)
Q Consensus 153 ~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G-~d~i~v~ 193 (308)
.++.++++|+.+++||+.-+..+++++..+.+.| +|+|.+.
T Consensus 282 ~~~~~~~v~~~~~iPvi~~Ggit~~~a~~~l~~g~aD~V~~g 323 (364)
T 1vyr_A 282 SEAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAVAFG 323 (364)
T ss_dssp CHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEES
T ss_pred cHHHHHHHHHHCCCCEEEECCcCHHHHHHHHHCCCccEEEEC
Confidence 3567899999999999988777999999999998 9999763
No 381
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=92.98 E-value=0.88 Score=38.93 Aligned_cols=41 Identities=20% Similarity=0.278 Sum_probs=31.9
Q ss_pred cCHHHHHHHHHhc--CCCEEEEe-cCCHHHHHHHHHcCCcEEEE
Q 021739 152 LNWKDVKWLQTIT--SLPILVKG-VLTAEDASLAIQYGAAGIIV 192 (308)
Q Consensus 152 ~~~~~i~~ir~~~--~~Pv~vK~-~~~~e~a~~~~~~G~d~i~v 192 (308)
.+++.++.+++.+ ++||+.=+ +.+.+++..+.++|+|.|-+
T Consensus 160 a~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~iG~ 203 (225)
T 1mzh_A 160 TTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRIGT 203 (225)
T ss_dssp CCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHHHH
Confidence 3578888888876 67876554 47899999999999997643
No 382
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=92.98 E-value=0.18 Score=45.36 Aligned_cols=110 Identities=13% Similarity=-0.039 Sum_probs=65.0
Q ss_pred CCceEEeeecCCchHHHHHHHHHHHcC-CcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhh
Q 021739 63 GIRFFQLYVTKHRNVDAQLVKRAERAG-FKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLA 141 (308)
Q Consensus 63 ~~~~~Ql~~~~d~~~~~~~~~~~~~~g-~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~ 141 (308)
-|.++.+.+..+.+.+.++++.++++| +++|.++- ....+.. .+.+. ..| .+.. . ...+
T Consensus 161 ~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~-~~~~~~~-i~~~~--~~~-~~~~-------------~--~~~g 220 (314)
T 2e6f_A 161 LPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVN-SVGNGLV-IDAES--ESV-VIKP-------------K--QGFG 220 (314)
T ss_dssp SCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECC-CEEEEEC-EETTT--TEE-SCCG-------------G--GGEE
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeC-CCCcccc-ccCCC--CCc-cccc-------------C--cCCC
Confidence 377888875567777888889999999 99987652 1100000 00000 000 0000 0 0000
Q ss_pred hHhhhhcccccCHHHHHHHHHhc-CCCEEEEec-CCHHHHHHHHHcCCcEEEEe
Q 021739 142 SYVANQIDRSLNWKDVKWLQTIT-SLPILVKGV-LTAEDASLAIQYGAAGIIVS 193 (308)
Q Consensus 142 ~~~~~~~d~~~~~~~i~~ir~~~-~~Pv~vK~~-~~~e~a~~~~~~G~d~i~v~ 193 (308)
.+ .........++.++++++.+ ++||+.-+. .+.+++..+..+|||+|.+.
T Consensus 221 G~-sg~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig 273 (314)
T 2e6f_A 221 GL-GGKYILPTALANVNAFYRRCPDKLVFGCGGVYSGEDAFLHILAGASMVQVG 273 (314)
T ss_dssp EE-ESGGGHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTCSSEEEC
T ss_pred cc-CcccccHHHHHHHHHHHHhcCCCCEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 00 00001123478899999998 999887654 68999999999999999874
No 383
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=92.91 E-value=1.3 Score=40.93 Aligned_cols=87 Identities=15% Similarity=0.063 Sum_probs=63.9
Q ss_pred HHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEE
Q 021739 154 WKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 225 (308)
Q Consensus 154 ~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia 225 (308)
.+.++++|+.+ ++++.+... .+.++ ++.+.+.|+.+|. +. -.+.+++.+.++++.+ .+||++
T Consensus 181 ~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~ipIa~ 250 (382)
T 3dgb_A 181 LAHVIAIKKALGDSASVRVDVNQAWDEAVALRACRILGGNGIDLIE-------QP-ISRNNRAGMVRLNASS--PAPIMA 250 (382)
T ss_dssp HHHHHHHHHHHGGGSEEEEECTTCBCHHHHHHHHHHHHTTTCCCEE-------CC-BCTTCHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHHHHHHcCCCCeEEEeCCCCCCHHHHHHHHHHHhhcCcCeee-------CC-CCccCHHHHHHHHHhC--CCCEEe
Confidence 46788888876 478887743 45554 4566777888774 10 0123577778887765 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 226 DGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
+..+.+..|+.+++..| +|.|++--
T Consensus 251 dE~~~~~~~~~~~~~~~~~d~v~~k~ 276 (382)
T 3dgb_A 251 DESIECVEDAFNLAREGAASVFALKI 276 (382)
T ss_dssp STTCSSHHHHHHHHHHTCCSEEEECH
T ss_pred CCCcCCHHHHHHHHHcCCCCEEEecc
Confidence 99999999999999976 89998864
No 384
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=92.88 E-value=0.47 Score=43.44 Aligned_cols=79 Identities=16% Similarity=0.262 Sum_probs=61.6
Q ss_pred CceEEeeec---CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchh
Q 021739 64 IRFFQLYVT---KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGL 140 (308)
Q Consensus 64 ~~~~Ql~~~---~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~ 140 (308)
|..+|-... .|.+.+.+.++++.++|++.+.+++ |..
T Consensus 31 Pi~VQSMtnt~T~D~~atv~Qi~~l~~aG~diVRvav--p~~-------------------------------------- 70 (366)
T 3noy_A 31 PIVVQSMTSTKTHDVEATLNQIKRLYEAGCEIVRVAV--PHK-------------------------------------- 70 (366)
T ss_dssp CCEEEEECCSCTTCHHHHHHHHHHHHHTTCCEEEEEC--CSH--------------------------------------
T ss_pred cEEEEEecCCCCcCHHHHHHHHHHHHHcCCCEEEeCC--CCh--------------------------------------
Confidence 667776632 3567777888888999999999876 211
Q ss_pred hhHhhhhcccccCHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEe
Q 021739 141 ASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVS 193 (308)
Q Consensus 141 ~~~~~~~~d~~~~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~ 193 (308)
+ ..+.++.|++.+++|+++=+-+++..+..++++|+|.+.+-
T Consensus 71 -~----------~a~al~~I~~~~~vPlvaDiHf~~~lal~a~e~G~dklRIN 112 (366)
T 3noy_A 71 -E----------DVEALEEIVKKSPMPVIADIHFAPSYAFLSMEKGVHGIRIN 112 (366)
T ss_dssp -H----------HHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHTTCSEEEEC
T ss_pred -H----------HHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHhCCCeEEEC
Confidence 0 02567889999999999877799999999999999998873
No 385
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=92.85 E-value=0.19 Score=43.74 Aligned_cols=60 Identities=22% Similarity=0.258 Sum_probs=41.6
Q ss_pred HHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCH-H---------HHHHHHHcCCCEEEEchH
Q 021739 182 AIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRG-T---------DVFKALALGASGVFVGRP 251 (308)
Q Consensus 182 ~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~-~---------d~~k~l~~GAd~V~ig~~ 251 (308)
..+.|.++++.+ ..+ +.++++... ..+++.+|||+-. . .+.+++.+|||.+.+||+
T Consensus 152 ~~~~G~~g~V~~------------~~e-i~~lr~~~~-~~~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~ 217 (246)
T 2yyu_A 152 AKESGLDGVVCS------------ANE-AAFIKERCG-ASFLAVTPGIRFADDAAHDQVRVVTPRKARALGSDYIVIGRS 217 (246)
T ss_dssp HHHHTCCEEECC------------HHH-HHHHHHHHC-TTSEEEECCCCCCC-------CCCCHHHHHHHTCSEEEECHH
T ss_pred HHHhCCCEEEeC------------HHH-HHHHHHhcC-CCCEEEeCCcCCCCCCcccccccCCHHHHHHcCCCEEEECHh
Confidence 356788877532 233 566665553 3459999999842 1 377778899999999999
Q ss_pred HHHh
Q 021739 252 VPFS 255 (308)
Q Consensus 252 ~l~~ 255 (308)
++.+
T Consensus 218 I~~a 221 (246)
T 2yyu_A 218 LTRA 221 (246)
T ss_dssp HHTS
T ss_pred hcCC
Confidence 8864
No 386
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=92.77 E-value=5.2 Score=35.86 Aligned_cols=181 Identities=16% Similarity=0.152 Sum_probs=108.7
Q ss_pred CceEeccccCcccCCCHHHHHHHHHHHHcCCceee--c---CCCCCCHHHHhc-------c-CCC-CceEEeeecCCchH
Q 021739 12 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--S---SWATSSVEEVSS-------T-GPG-IRFFQLYVTKHRNV 77 (308)
Q Consensus 12 ~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~--s---~~~~~~~e~i~~-------~-~~~-~~~~Ql~~~~d~~~ 77 (308)
.|.++.||.-.+-.+.++-..+.+-..+.|+...+ + |..+.+.+|..+ . ... +.+.... ..+.+.
T Consensus 28 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~st~e 106 (314)
T 3qze_A 28 MVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTG-ANSTRE 106 (314)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHH
T ss_pred EEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHH
Confidence 36677888644335555556677777788876433 2 234556665332 1 222 5666654 446777
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHH
Q 021739 78 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 157 (308)
Q Consensus 78 ~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 157 (308)
..++.+.+++.|++++.+- .|... + .. ++- ..+..
T Consensus 107 ai~la~~A~~~Gadavlv~--~P~y~--------------~-------------------~s-~~~---------l~~~f 141 (314)
T 3qze_A 107 AVALTEAAKSGGADACLLV--TPYYN--------------K-------------------PT-QEG---------MYQHF 141 (314)
T ss_dssp HHHHHHHHHHTTCSEEEEE--CCCSS--------------C-------------------CC-HHH---------HHHHH
T ss_pred HHHHHHHHHHcCCCEEEEc--CCCCC--------------C-------------------CC-HHH---------HHHHH
Confidence 8888899999999998765 34320 0 00 111 13567
Q ss_pred HHHHHhcCCCEEEEec-------CCHHHHHHHHHcC-CcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCC
Q 021739 158 KWLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 229 (308)
Q Consensus 158 ~~ir~~~~~Pv~vK~~-------~~~e~a~~~~~~G-~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI 229 (308)
+.|.+.+++||++=.+ ++++...++.+.. +-+|.-+ . .+...+.++.+..+.++.|+ +|.
T Consensus 142 ~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKds--s--------gd~~~~~~~~~~~~~~f~v~-~G~- 209 (314)
T 3qze_A 142 RHIAEAVAIPQILYNVPGRTSCDMLPETVERLSKVPNIIGIKEA--T--------GDLQRAKEVIERVGKDFLVY-SGD- 209 (314)
T ss_dssp HHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEEEC--S--------CCHHHHHHHHHHSCTTSEEE-ESC-
T ss_pred HHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEEEcC--C--------CCHHHHHHHHHHcCCCeEEE-ecC-
Confidence 7888888999987643 5678887777532 2222211 1 13444555555554456654 342
Q ss_pred CCHHHHHHHHHcCCCEEEEchHH
Q 021739 230 RRGTDVFKALALGASGVFVGRPV 252 (308)
Q Consensus 230 ~~~~d~~k~l~~GAd~V~ig~~~ 252 (308)
-..+..++.+|++++.-+..-
T Consensus 210 --d~~~l~~l~~Ga~G~is~~an 230 (314)
T 3qze_A 210 --DATAVELMLLGGKGNISVTAN 230 (314)
T ss_dssp --GGGHHHHHHTTCCEEEESGGG
T ss_pred --hHHHHHHHHCCCCEEEecHHh
Confidence 234678889999999877743
No 387
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=92.75 E-value=0.46 Score=43.88 Aligned_cols=40 Identities=25% Similarity=0.102 Sum_probs=34.9
Q ss_pred CHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcC-CcEEEE
Q 021739 153 NWKDVKWLQTITSLPILVKGVLTAEDASLAIQYG-AAGIIV 192 (308)
Q Consensus 153 ~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G-~d~i~v 192 (308)
.++.++++|+.+++||+.-+..+++++..+++.| +|+|.+
T Consensus 281 ~~~~~~~i~~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~i 321 (365)
T 2gou_A 281 PVSFKRALREAYQGVLIYAGRYNAEKAEQAINDGLADMIGF 321 (365)
T ss_dssp CHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEC
T ss_pred cHHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHCCCcceehh
Confidence 3577899999999999987767999999999998 999976
No 388
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=92.75 E-value=0.85 Score=38.50 Aligned_cols=43 Identities=23% Similarity=0.295 Sum_probs=36.7
Q ss_pred cCHHHHHHHHHhcC-CCEEEEecCCHHHHHHHHHcCCcEEEEec
Q 021739 152 LNWKDVKWLQTITS-LPILVKGVLTAEDASLAIQYGAAGIIVSN 194 (308)
Q Consensus 152 ~~~~~i~~ir~~~~-~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~ 194 (308)
..|+.++++++..+ +|+++-+..+++.+..+.++|+|++.++.
T Consensus 158 ~~~~~l~~~~~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs 201 (227)
T 2tps_A 158 QGVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMIS 201 (227)
T ss_dssp CTTHHHHHHHHTTCCCCEEEESSCCTTTSHHHHHTTCSEEEESH
T ss_pred cCHHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHcCCCEEEEhH
Confidence 45788999998887 99998877778888889999999998854
No 389
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=92.59 E-value=5.3 Score=35.48 Aligned_cols=179 Identities=12% Similarity=0.094 Sum_probs=103.9
Q ss_pred ceEeccccCcccCCCHHHHHHHHHHHHcCCceee--c---CCCCCCHHHHhc-------c-CCC-CceEEeeecCCchHH
Q 021739 13 PIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--S---SWATSSVEEVSS-------T-GPG-IRFFQLYVTKHRNVD 78 (308)
Q Consensus 13 Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~--s---~~~~~~~e~i~~-------~-~~~-~~~~Ql~~~~d~~~~ 78 (308)
|.++.|| -.+-.+.+.-..+.+-..+.|+...+ + |..+.+.+|..+ . ... +.+.... ..+.+..
T Consensus 7 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 84 (297)
T 2rfg_A 7 IAMITPF-INGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAG-SNNPVEA 84 (297)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHH
T ss_pred EeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccC-CCCHHHH
Confidence 5566777 44334555556677777788986544 2 224556655331 1 222 6677665 4466777
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHH
Q 021739 79 AQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVK 158 (308)
Q Consensus 79 ~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~ 158 (308)
.++.+.+++.|++++.+. .|... + . .++- ..+..+
T Consensus 85 i~la~~A~~~Gadavlv~--~P~y~--------------~-------------------~-s~~~---------l~~~f~ 119 (297)
T 2rfg_A 85 VRYAQHAQQAGADAVLCV--AGYYN--------------R-------------------P-SQEG---------LYQHFK 119 (297)
T ss_dssp HHHHHHHHHHTCSEEEEC--CCTTT--------------C-------------------C-CHHH---------HHHHHH
T ss_pred HHHHHHHHhcCCCEEEEc--CCCCC--------------C-------------------C-CHHH---------HHHHHH
Confidence 788899999999998764 34320 0 0 0111 134567
Q ss_pred HHHHhcCCCEEEEec-------CCHHHHHHHHHcC-CcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCC
Q 021739 159 WLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVR 230 (308)
Q Consensus 159 ~ir~~~~~Pv~vK~~-------~~~e~a~~~~~~G-~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~ 230 (308)
.|.+.+++||++=.+ ++++...++.+.. +-+|.-+. + +...+.++.+..++++.| .+|.
T Consensus 120 ~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKds~--g--------d~~~~~~~~~~~~~~f~v-~~G~-- 186 (297)
T 2rfg_A 120 MVHDAIDIPIIVYNIPPRAVVDIKPETMARLAALPRIVGVKDAT--T--------DLARISRERMLINKPFSF-LSGD-- 186 (297)
T ss_dssp HHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEEECS--C--------CTTHHHHHHTTCCSCCEE-EESC--
T ss_pred HHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEEEEeCC--C--------CHHHHHHHHHhcCCCEEE-EeCc--
Confidence 788888999987543 5778887777532 22333211 1 122333444333334555 3442
Q ss_pred CHHHHHHHHHcCCCEEEEchHH
Q 021739 231 RGTDVFKALALGASGVFVGRPV 252 (308)
Q Consensus 231 ~~~d~~k~l~~GAd~V~ig~~~ 252 (308)
-..+..++.+|++++.-+..-
T Consensus 187 -d~~~l~~l~~G~~G~is~~an 207 (297)
T 2rfg_A 187 -DMTAIAYNASGGQGCISVSAN 207 (297)
T ss_dssp -GGGHHHHHHTTCCEEEESGGG
T ss_pred -HHHHHHHHHCCCCEEEecHHH
Confidence 234667889999999888753
No 390
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=92.54 E-value=5.6 Score=35.64 Aligned_cols=178 Identities=13% Similarity=0.056 Sum_probs=105.2
Q ss_pred ceEeccc-cCcccCCCHHHHHHHHHHHHcCCceee--c---CCCCCCHHHHhc-------c-CCC-CceEEeeecCCchH
Q 021739 13 PIMIAPT-AFQKMAHPEGECATARAASAAGTIMTL--S---SWATSSVEEVSS-------T-GPG-IRFFQLYVTKHRNV 77 (308)
Q Consensus 13 Pi~iapm-~~~~~~~~~~~~~~a~~a~~~g~~~~~--s---~~~~~~~e~i~~-------~-~~~-~~~~Ql~~~~d~~~ 77 (308)
|.++.|| .-.+-.+.+.-..+.+-..+.|+...+ + |..+.+.+|..+ . ... +.+.... . +.+.
T Consensus 17 ~a~vTPF~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg-~-st~~ 94 (314)
T 3d0c_A 17 GINIVPFLEGTREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIG-Y-SVDT 94 (314)
T ss_dssp ECCCCCBCTTTCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC-S-SHHH
T ss_pred EeeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCC-c-CHHH
Confidence 5567787 543334555556777777788986544 2 234566665332 1 222 5677775 4 7677
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHH
Q 021739 78 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 157 (308)
Q Consensus 78 ~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 157 (308)
..++.+.+++.|++++.+. .|... + .. ++- ..+..
T Consensus 95 ai~la~~A~~~Gadavlv~--~P~y~--------------~-------------------~s-~~~---------l~~~f 129 (314)
T 3d0c_A 95 AIELGKSAIDSGADCVMIH--QPVHP--------------Y-------------------IT-DAG---------AVEYY 129 (314)
T ss_dssp HHHHHHHHHHTTCSEEEEC--CCCCS--------------C-------------------CC-HHH---------HHHHH
T ss_pred HHHHHHHHHHcCCCEEEEC--CCCCC--------------C-------------------CC-HHH---------HHHHH
Confidence 7788899999999998764 34320 0 00 111 13556
Q ss_pred HHHHHhcCCCEEEEec---CCHHHHHHHHHcC-CcEEEEecccccCCCCCcchHHHHHHHHHHccC--CCeEEEecCCCC
Q 021739 158 KWLQTITSLPILVKGV---LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKG--RVPVFLDGGVRR 231 (308)
Q Consensus 158 ~~ir~~~~~Pv~vK~~---~~~e~a~~~~~~G-~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~--~ipvia~GGI~~ 231 (308)
+.|.+.+++||++=.. ++++...++.+.. +-+|.-+. .+...+.++.+..++ ++.| .+|.
T Consensus 130 ~~va~a~~lPiilYn~tg~l~~~~~~~La~~pnIvgiKdss----------gd~~~~~~~~~~~~~~~~f~v-~~G~--- 195 (314)
T 3d0c_A 130 RNIIEALDAPSIIYFKDAHLSDDVIKELAPLDKLVGIKYAI----------NDIQRVTQVMRAVPKSSNVAF-ICGT--- 195 (314)
T ss_dssp HHHHHHSSSCEEEEECCTTSCTHHHHHHTTCTTEEEEEECC----------CCHHHHHHHHHHSCGGGCCEE-EETT---
T ss_pred HHHHHhCCCCEEEEeCCCCcCHHHHHHHHcCCCEEEEEeCC----------CCHHHHHHHHHhcCCCCCEEE-EEeC---
Confidence 7788888999987321 5677777776531 22332211 124445555554433 4444 3442
Q ss_pred HH-HHHHHHHcCCCEEEEchH
Q 021739 232 GT-DVFKALALGASGVFVGRP 251 (308)
Q Consensus 232 ~~-d~~k~l~~GAd~V~ig~~ 251 (308)
.. .+..++.+|++++.-+.+
T Consensus 196 d~~~~~~~l~~G~~G~is~~a 216 (314)
T 3d0c_A 196 AEKWAPFFYHAGAVGFTSGLV 216 (314)
T ss_dssp HHHHHHHHHHHTCCEEEESGG
T ss_pred cHHHHHHHHHcCCCEEEecHH
Confidence 34 577888999999988874
No 391
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=92.47 E-value=0.5 Score=42.07 Aligned_cols=77 Identities=18% Similarity=0.246 Sum_probs=55.0
Q ss_pred cCCCEEEEecCCHHHHHHHHHcCCcEEEEec--------ccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHH
Q 021739 164 TSLPILVKGVLTAEDASLAIQYGAAGIIVSN--------HGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDV 235 (308)
Q Consensus 164 ~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~--------~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~ 235 (308)
...|+++ .+...+.++.+.++|++.|.+.. .+|.. .....+.+.++++.+ ++|++...++.+.+++
T Consensus 20 ~~~~~i~-~~~~~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~---~~~~~~~i~~i~~~~--~~Pvi~~~~~~~~~~~ 93 (297)
T 2zbt_A 20 FKGGVIM-DVTTPEQAVIAEEAGAVAVMALERVPADIRAQGGVA---RMSDPKIIKEIMAAV--SIPVMAKVRIGHFVEA 93 (297)
T ss_dssp GTTEEEE-EESSHHHHHHHHHHTCSEEEECSSCHHHHHHTTCCC---CCCCHHHHHHHHTTC--SSCEEEEEETTCHHHH
T ss_pred hhCCeee-eechHHHHHHHHHCCCcEEEeccccchHHHhhcCCc---cCCCHHHHHHHHHhc--CCCeEEEeccCCHHHH
Confidence 3457665 33457889999999999998721 11110 122456666666544 7899998888888999
Q ss_pred HHHHHcCCCEE
Q 021739 236 FKALALGASGV 246 (308)
Q Consensus 236 ~k~l~~GAd~V 246 (308)
..++++|||.|
T Consensus 94 ~~~~~aGad~v 104 (297)
T 2zbt_A 94 MILEAIGVDFI 104 (297)
T ss_dssp HHHHHTTCSEE
T ss_pred HHHHHCCCCEE
Confidence 99999999999
No 392
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=92.40 E-value=1.3 Score=41.26 Aligned_cols=117 Identities=15% Similarity=0.146 Sum_probs=79.5
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
.+++.+.+.+++..+.|++.+-+.++++ +++.
T Consensus 163 ~~~e~~~~~a~~~~~~G~~~~KlKvg~~------------------------------------------------~~~~ 194 (391)
T 4e8g_A 163 GQPDEIARIAAEKVAEGFPRLQIKIGGR------------------------------------------------PVEI 194 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSS------------------------------------------------CHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEcCCCC------------------------------------------------CHHH
Confidence 4677777777777778999987766431 1112
Q ss_pred CHHHHHHHHHhc---CCCEEEEec--CCHHHHHHH----HHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeE
Q 021739 153 NWKDVKWLQTIT---SLPILVKGV--LTAEDASLA----IQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 153 ~~~~i~~ir~~~---~~Pv~vK~~--~~~e~a~~~----~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipv 223 (308)
..+.++++|+.. ++++.+... .+.+++.++ .+.++ +|. +. ..+++.+.++++.. .+||
T Consensus 195 d~~~v~avR~a~gg~~~~L~vDaN~~w~~~~A~~~~~~L~~~~i-~iE-------eP---~~~~~~~~~l~~~~--~iPI 261 (391)
T 4e8g_A 195 DIETVRKVWERIRGTGTRLAVDGNRSLPSRDALRLSRECPEIPF-VLE-------QP---CNTLEEIAAIRGRV--QHGI 261 (391)
T ss_dssp HHHHHHHHHHHHTTTTCEEEEECTTCCCHHHHHHHHHHCTTSCE-EEE-------SC---SSSHHHHHHHGGGC--CSCE
T ss_pred HHHHHHHHHHHhCCCCCeEEEeCCCCCCHHHHHHHHHHHhhcCe-EEe-------cC---CccHHHHHHHHhhC--CCCE
Confidence 246688887764 467777643 466665443 34454 442 11 23566677776554 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 224 FLDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
.++..+.+..|+.+++..| +|.+++--
T Consensus 262 a~dE~~~~~~~~~~~~~~~a~d~v~ik~ 289 (391)
T 4e8g_A 262 YLDESGEDLSTVIRAAGQGLCDGFGMKL 289 (391)
T ss_dssp EESTTCCSHHHHHHHHHTTCCSEEEEEH
T ss_pred EeCCCCCCHHHHHHHHHcCCCCEEEeCc
Confidence 9999999999999999987 78998854
No 393
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=92.40 E-value=0.96 Score=41.60 Aligned_cols=60 Identities=8% Similarity=0.030 Sum_probs=44.5
Q ss_pred HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEE
Q 021739 176 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFV 248 (308)
Q Consensus 176 ~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~i 248 (308)
.+.++.+.+.|+|.|.++.. .+..+.+.++++. .++++. .+.+.+++.++...|+|++.+
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g--------~~~~~~i~~~~~~---g~~v~~--~v~t~~~a~~a~~~GaD~i~v 171 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFG--------VPDREVIARLRRA---GTLTLV--TATTPEEARAVEAAGADAVIA 171 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESS--------CCCHHHHHHHHHT---TCEEEE--EESSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhcCCCEEEEeCC--------CCcHHHHHHHHHC---CCeEEE--ECCCHHHHHHHHHcCCCEEEE
Confidence 35578888999999987531 1234556665542 577776 478999999999999999998
No 394
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=92.30 E-value=5.7 Score=35.15 Aligned_cols=181 Identities=14% Similarity=0.135 Sum_probs=103.3
Q ss_pred ceEeccccCcccCCCHHHHHHHHHHHHcCCceee--cC---CCCCCHHHHhc-------c-CCC-CceEEeeecCCchHH
Q 021739 13 PIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVSS-------T-GPG-IRFFQLYVTKHRNVD 78 (308)
Q Consensus 13 Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~--s~---~~~~~~e~i~~-------~-~~~-~~~~Ql~~~~d~~~~ 78 (308)
|.++.||.-.+-.+.+.-..+.+-..+.|+...+ ++ ..+.+.+|..+ . ... +.+.... ..+.+..
T Consensus 7 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 85 (292)
T 2ojp_A 7 VAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTG-ANATAEA 85 (292)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred eeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHH
Confidence 5667888544334555556677777778876543 32 23556655331 1 222 5666654 3456777
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHH
Q 021739 79 AQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVK 158 (308)
Q Consensus 79 ~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~ 158 (308)
.++.+.+++.|++++.+. .|... + . .++- ..+..+
T Consensus 86 i~la~~a~~~Gadavlv~--~P~y~--------------~-------------------~-s~~~---------l~~~f~ 120 (292)
T 2ojp_A 86 ISLTQRFNDSGIVGCLTV--TPYYN--------------R-------------------P-SQEG---------LYQHFK 120 (292)
T ss_dssp HHHHHHTTTSSCSEEEEE--CCCSS--------------C-------------------C-CHHH---------HHHHHH
T ss_pred HHHHHHHHhcCCCEEEEC--CCCCC--------------C-------------------C-CHHH---------HHHHHH
Confidence 778888889999998765 34320 0 0 0111 134567
Q ss_pred HHHHhcCCCEEEEec-------CCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCC
Q 021739 159 WLQTITSLPILVKGV-------LTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR 231 (308)
Q Consensus 159 ~ir~~~~~Pv~vK~~-------~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~ 231 (308)
.|.+.+++||++=.. ++++...++.+. .-|+ + -. + ...+...+.++.+..++++.|+ +|.
T Consensus 121 ~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pniv--g---iK-~-s~gd~~~~~~~~~~~~~~f~v~-~G~--- 187 (292)
T 2ojp_A 121 AIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKV--KNII--G---IX-E-ATGNLTRVNQIKELVSDDFVLL-SGD--- 187 (292)
T ss_dssp HHHTTCSSCEEEECCHHHHSCCCCHHHHHHHHTS--TTEE--E---C--C-CSCCTHHHHHHHTTSCTTSBCE-ESC---
T ss_pred HHHHhcCCCEEEEeCcchhccCCCHHHHHHHHcC--CCEE--E---Ee-C-CCCCHHHHHHHHHhcCCCEEEE-ECc---
Confidence 788888999987543 567888777753 2232 1 00 0 0112333444444333345553 342
Q ss_pred HHHHHHHHHcCCCEEEEchHH
Q 021739 232 GTDVFKALALGASGVFVGRPV 252 (308)
Q Consensus 232 ~~d~~k~l~~GAd~V~ig~~~ 252 (308)
...+..++.+|++++.-+..-
T Consensus 188 d~~~~~~l~~G~~G~is~~~n 208 (292)
T 2ojp_A 188 DASALDFMQYGGHGVISVTAN 208 (292)
T ss_dssp GGGHHHHHHTTCCEEEESGGG
T ss_pred HHHHHHHHHCCCcEEEeCHHH
Confidence 234667889999999888743
No 395
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=92.23 E-value=4.2 Score=35.90 Aligned_cols=87 Identities=18% Similarity=0.277 Sum_probs=57.4
Q ss_pred HHHHHHHHh---cCCCEEEEecCC-------------H----HHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHH
Q 021739 155 KDVKWLQTI---TSLPILVKGVLT-------------A----EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVV 214 (308)
Q Consensus 155 ~~i~~ir~~---~~~Pv~vK~~~~-------------~----e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~ 214 (308)
+.|+.+++. .++|+.+-.+.. . +.++.+.++|||.|.+-+ .++.+.+.++.
T Consensus 130 ~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~eAGAd~i~~e~---------~~~~~~~~~i~ 200 (275)
T 2ze3_A 130 RRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAETVRRGQAYADAGADGIFVPL---------ALQSQDIRALA 200 (275)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHHHHHHHHHTTCSEEECTT---------CCCHHHHHHHH
T ss_pred HHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHHHHHHHHHHHHCCCCEEEECC---------CCCHHHHHHHH
Confidence 456666554 267766654421 1 236788899999997632 34567778888
Q ss_pred HHccCCCeEEEec--CCCCHHHHHHHHHcCCCEEEEchHHHHh
Q 021739 215 QAAKGRVPVFLDG--GVRRGTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 215 ~~~~~~ipvia~G--GI~~~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
+.+ ++|+-... +..+. .+.-++|...|..+...+.+
T Consensus 201 ~~~--~~P~n~~~~~~~~~~---~eL~~lGv~~v~~~~~~~ra 238 (275)
T 2ze3_A 201 DAL--RVPLNVMAFPGSPVP---RALLDAGAARVSFGQSLMLA 238 (275)
T ss_dssp HHC--SSCEEEECCTTSCCH---HHHHHTTCSEEECTTHHHHH
T ss_pred Hhc--CCCEEEecCCCCCCH---HHHHHcCCcEEEEChHHHHH
Confidence 877 57775553 34444 45557999999999877764
No 396
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=92.22 E-value=0.44 Score=43.75 Aligned_cols=67 Identities=18% Similarity=0.135 Sum_probs=48.2
Q ss_pred HHHHHHHHc--CCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 021739 177 EDASLAIQY--GAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 249 (308)
Q Consensus 177 e~a~~~~~~--G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig 249 (308)
+.+..+.+. |+|.+.++...|. ....++.+.++++.. +++||++ |++.+.+|+.++.++|||++.++
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g~----~~~~~~~i~~lr~~~-~~~~vi~-g~v~t~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANGY----SEHFVEFVKDVRKRF-PQHTIMA-GNVVTGEMVEELILSGADIIKVG 189 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCTT----BHHHHHHHHHHHHHC-TTSEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhccCCCCEEEEEecCCC----cHHHHHHHHHHHHhc-CCCeEEE-EeCCCHHHHHHHHHhCCCEEEEC
Confidence 345566666 9999887643221 123466777777665 2588885 67889999999999999999775
No 397
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=92.19 E-value=2.1 Score=39.49 Aligned_cols=87 Identities=15% Similarity=0.076 Sum_probs=64.3
Q ss_pred HHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEE
Q 021739 154 WKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 225 (308)
Q Consensus 154 ~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia 225 (308)
.+.++++|+.+ ++++.+-.. .+.++ ++.+.+.++.+|. +. -.+.+++.+.++++.+ ++||.+
T Consensus 180 ~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE-------eP-~~~~d~~~~~~l~~~~--~ipIa~ 249 (381)
T 3fcp_A 180 LRHTRAIVEALGDRASIRVDVNQAWDAATGAKGCRELAAMGVDLIE-------QP-VSAHDNAALVRLSQQI--ETAILA 249 (381)
T ss_dssp HHHHHHHHHHTCTTCEEEEECTTCBCHHHHHHHHHHHHHTTCSEEE-------CC-BCTTCHHHHHHHHHHS--SSEEEE
T ss_pred HHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHhhcCcccee-------CC-CCcccHHHHHHHHHhC--CCCEEE
Confidence 46788999886 467777643 45554 5667788888884 10 0123577778887766 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 226 DGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
+..+.+..|+.+++..| +|.+++--
T Consensus 250 dE~~~~~~~~~~~~~~~a~d~v~~k~ 275 (381)
T 3fcp_A 250 DEAVATAYDGYQLAQQGFTGAYALKI 275 (381)
T ss_dssp STTCCSHHHHHHHHHTTCCSEEEECH
T ss_pred CCCcCCHHHHHHHHHcCCCCEEEecc
Confidence 99999999999999976 89998864
No 398
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=92.13 E-value=2.1 Score=38.35 Aligned_cols=113 Identities=19% Similarity=0.111 Sum_probs=76.7
Q ss_pred CCHHHHHHHHHcCCcEEEEec---ccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCC-HHHHHHHHHcCCCEEEEc
Q 021739 174 LTAEDASLAIQYGAAGIIVSN---HGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR-GTDVFKALALGASGVFVG 249 (308)
Q Consensus 174 ~~~e~a~~~~~~G~d~i~v~~---~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~-~~d~~k~l~~GAd~V~ig 249 (308)
.+++++....+.|+|.+-++. ||-+......-.++.|.++.+.+..++|++.=||=.. .+++.+++..|..=+-++
T Consensus 172 T~Peea~~Fv~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~~vpLVlHGgSG~p~e~i~~ai~~GV~KiNi~ 251 (306)
T 3pm6_A 172 TTPEESEEFVATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVGERVGLVLHGADPFTKEIFEKCIERGVAKVNVN 251 (306)
T ss_dssp CCHHHHHHHHTTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHTTTSEEEECSCTTCCHHHHHHHHHTTEEEEEES
T ss_pred CCHHHHHHHHHcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhCCCCCEEeeCCCCCCHHHHHHHHHcCCeEEEeC
Confidence 468999888899999988764 3322111122367888899887754799999887544 566889999999999999
Q ss_pred hHHHHhcc--------cCCH-HHHHHHHHHHHHHHHHHHHHcCCCC
Q 021739 250 RPVPFSLA--------VDGE-AGVRKVLQMLRDEFELTMALSGCRS 286 (308)
Q Consensus 250 ~~~l~~~~--------~~G~-~~v~~~i~~l~~~l~~~m~~~G~~~ 286 (308)
+-+..+.. ...+ .-+....+.+++.++..|+.+|...
T Consensus 252 Tdl~~a~~~~~r~~~~~~~~~~~~~~~~~a~~~~v~~~i~~fgs~g 297 (306)
T 3pm6_A 252 RAVNNEYVKVMREKAGSLPITRLHEEVTNAMQAAVEKIMDMIDSTG 297 (306)
T ss_dssp HHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred hHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 96644321 1111 1233344567777788888888753
No 399
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=92.07 E-value=0.53 Score=41.90 Aligned_cols=72 Identities=28% Similarity=0.268 Sum_probs=52.4
Q ss_pred CCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCH-------------HHHHHHHH
Q 021739 174 LTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRG-------------TDVFKALA 240 (308)
Q Consensus 174 ~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~-------------~d~~k~l~ 240 (308)
.+.+++..+.+.|||.|.+-..- ...+--|+...+..+++.+ ++||.+.=--+.+ +|+..+.+
T Consensus 47 ~s~~~a~~A~~gGAdRIELc~~l--~~GGlTPS~g~i~~a~~~~--~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~ 122 (287)
T 3iwp_A 47 DSVESAVNAERGGADRIELCSGL--SEGGTTPSMGVLQVVKQSV--QIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKL 122 (287)
T ss_dssp SSHHHHHHHHHHTCSEEEECBCG--GGTCBCCCHHHHHHHHTTC--CSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCEEEECCCC--CCCCCCCCHHHHHHHHHhc--CCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHH
Confidence 78999999999999999985321 1111235666777776654 6888875333333 68989999
Q ss_pred cCCCEEEEc
Q 021739 241 LGASGVFVG 249 (308)
Q Consensus 241 ~GAd~V~ig 249 (308)
+|||.|.+|
T Consensus 123 ~GAdGvVfG 131 (287)
T 3iwp_A 123 YGADGLVFG 131 (287)
T ss_dssp TTCSEEEEC
T ss_pred cCCCEEEEe
Confidence 999999999
No 400
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=92.01 E-value=0.7 Score=41.91 Aligned_cols=81 Identities=19% Similarity=0.204 Sum_probs=58.5
Q ss_pred HHHHHHHHHhcCCCEEEEecC-C---HHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCC
Q 021739 154 WKDVKWLQTITSLPILVKGVL-T---AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 229 (308)
Q Consensus 154 ~~~i~~ir~~~~~Pv~vK~~~-~---~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI 229 (308)
.+.++++++.++.|+.+.... + .+.++.+.++|+|+|.++.. . + .+.+..+++ . .+|++.. +
T Consensus 52 ~~~i~~i~~~~~~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~g--~-----p--~~~i~~l~~-~--g~~v~~~--v 117 (332)
T 2z6i_A 52 KANIDKIKSLTDKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAG--N-----P--SKYMERFHE-A--GIIVIPV--V 117 (332)
T ss_dssp HHHHHHHHHHCCSCEEEEECTTSTTHHHHHHHHHHTTCSEEEECSS--C-----G--GGTHHHHHH-T--TCEEEEE--E
T ss_pred HHHHHHHHHhcCCCEEEEecCCCCCHHHHHHHHHHCCCCEEEECCC--C-----h--HHHHHHHHH-c--CCeEEEE--e
Confidence 356788888778899888764 3 35588899999999987542 1 1 223344443 2 5788854 7
Q ss_pred CCHHHHHHHHHcCCCEEEE
Q 021739 230 RRGTDVFKALALGASGVFV 248 (308)
Q Consensus 230 ~~~~d~~k~l~~GAd~V~i 248 (308)
.+.+++.++...|+|++.+
T Consensus 118 ~~~~~a~~~~~~GaD~i~v 136 (332)
T 2z6i_A 118 PSVALAKRMEKIGADAVIA 136 (332)
T ss_dssp SSHHHHHHHHHTTCSCEEE
T ss_pred CCHHHHHHHHHcCCCEEEE
Confidence 8999999888999999998
No 401
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=91.96 E-value=2.3 Score=37.94 Aligned_cols=89 Identities=20% Similarity=0.207 Sum_probs=58.0
Q ss_pred HHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecc---cccCCCC--CcchHHHHHHHHHHccCCCeEEEecC
Q 021739 154 WKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNH---GARQLDY--VPATVMALEEVVQAAKGRVPVFLDGG 228 (308)
Q Consensus 154 ~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~---gg~~~~~--~~~~~~~l~~i~~~~~~~ipvia~GG 228 (308)
+...+.+.+..+-++++ .....+.++.+.++|+|+|.+-+. -.....+ .....+.+.++.+.+ ++|++. +
T Consensus 10 ~~~~~~~~~~~~~g~i~-~~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~--~iPv~~--k 84 (305)
T 2nv1_A 10 ERVKRGMAEMQKGGVIM-DVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAV--SIPVMA--K 84 (305)
T ss_dssp HHHHHHHHHTTTTCEEE-EESSHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHC--SSCEEE--E
T ss_pred HHHHHHHHHHccCCeee-cCCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhC--CCCEEe--c
Confidence 34445565666677776 556678899999999999954220 0000001 223466777777665 789985 4
Q ss_pred CCC--HHHHHHHHHcCCCEEE
Q 021739 229 VRR--GTDVFKALALGASGVF 247 (308)
Q Consensus 229 I~~--~~d~~k~l~~GAd~V~ 247 (308)
++. .+++..++++|||+|.
T Consensus 85 ~r~g~~~~~~~~~a~GAd~V~ 105 (305)
T 2nv1_A 85 ARIGHIVEARVLEAMGVDYID 105 (305)
T ss_dssp ECTTCHHHHHHHHHHTCSEEE
T ss_pred ccccchHHHHHHHHCCCCEEE
Confidence 444 6777777889999996
No 402
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=91.92 E-value=4.1 Score=36.19 Aligned_cols=110 Identities=15% Similarity=0.133 Sum_probs=72.9
Q ss_pred CCHHHHHHHH-HcCCcEEEEecccccCCCCC--cchHHHHHHHHHHccCCCeEEEecCCCC-HHHHHHHHHcCCCEEEEc
Q 021739 174 LTAEDASLAI-QYGAAGIIVSNHGARQLDYV--PATVMALEEVVQAAKGRVPVFLDGGVRR-GTDVFKALALGASGVFVG 249 (308)
Q Consensus 174 ~~~e~a~~~~-~~G~d~i~v~~~gg~~~~~~--~~~~~~l~~i~~~~~~~ipvia~GGI~~-~~d~~k~l~~GAd~V~ig 249 (308)
.+|+++.... +.|+|.+-++.+.-+..+.+ .-.++.|.++++.+ .+|++.=||=.. .+++.+++..|..=|-++
T Consensus 159 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v--~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~ 236 (288)
T 3q94_A 159 ADPAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFT--GVPLVLHGGTGIPTADIEKAISLGTSKINVN 236 (288)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHH--CSCEEECCCTTCCHHHHHHHHHTTEEEEEEC
T ss_pred CCHHHHHHHHHHHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhc--CCCEEEeCCCCCCHHHHHHHHHcCCeEEEEC
Confidence 4588887665 69999999874322222222 23678889998887 699998886433 566889999999999999
Q ss_pred hHHHHhcc-------c---C--CH-HHHHHHHHHHHHHHHHHHHHcCCC
Q 021739 250 RPVPFSLA-------V---D--GE-AGVRKVLQMLRDEFELTMALSGCR 285 (308)
Q Consensus 250 ~~~l~~~~-------~---~--G~-~~v~~~i~~l~~~l~~~m~~~G~~ 285 (308)
+-+-++.. . . .+ .-+....+.+++.++..|+.+|+.
T Consensus 237 Tdl~~a~~~~~r~~~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~ 285 (288)
T 3q94_A 237 TENQIEFTKAVREVLNKDQEVYDPRKFIGPGRDAIKATVIGKIREFGSN 285 (288)
T ss_dssp HHHHHHHHHHHHHHHHHCSSCCCTHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred hHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 97654321 0 0 11 123334456667777777777754
No 403
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=91.85 E-value=0.3 Score=43.22 Aligned_cols=40 Identities=25% Similarity=0.230 Sum_probs=34.2
Q ss_pred CHHHHHHHHHhcCCCEEEEecC-CHHHHHHHHHcCCcEEEEec
Q 021739 153 NWKDVKWLQTITSLPILVKGVL-TAEDASLAIQYGAAGIIVSN 194 (308)
Q Consensus 153 ~~~~i~~ir~~~~~Pv~vK~~~-~~e~a~~~~~~G~d~i~v~~ 194 (308)
..+.++++|+.+++||++.... +++++..+ .|+|+++|..
T Consensus 190 ~~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGS 230 (271)
T 1ujp_A 190 VKDLVRRIKARTALPVAVGFGVSGKATAAQA--AVADGVVVGS 230 (271)
T ss_dssp CHHHHHHHHTTCCSCEEEESCCCSHHHHHHH--TTSSEEEECH
T ss_pred HHHHHHHHHhhcCCCEEEEcCCCCHHHHHHh--cCCCEEEECh
Confidence 4678999999889999999765 59999997 8999999854
No 404
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=91.74 E-value=0.49 Score=43.36 Aligned_cols=43 Identities=26% Similarity=0.252 Sum_probs=36.0
Q ss_pred ccCHHHHHHHHHhc--CCCEEEE-ecCCHHHHHHHHHcCCcEEEEe
Q 021739 151 SLNWKDVKWLQTIT--SLPILVK-GVLTAEDASLAIQYGAAGIIVS 193 (308)
Q Consensus 151 ~~~~~~i~~ir~~~--~~Pv~vK-~~~~~e~a~~~~~~G~d~i~v~ 193 (308)
+..++.++++++.+ ++||+.- ++.+.+++.++..+|||+|.+.
T Consensus 259 p~a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~ig 304 (345)
T 3oix_A 259 PTALANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIG 304 (345)
T ss_dssp HHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEC
Confidence 34578999999988 6998755 4578999999999999999874
No 405
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=91.74 E-value=1.3 Score=39.70 Aligned_cols=78 Identities=26% Similarity=0.451 Sum_probs=52.9
Q ss_pred hcCCCEEEE--e----------cCCHHH----HHHHHHcCCc----EEEEecccccCCCCCcchHHHHHHHHHHccCCCe
Q 021739 163 ITSLPILVK--G----------VLTAED----ASLAIQYGAA----GIIVSNHGARQLDYVPATVMALEEVVQAAKGRVP 222 (308)
Q Consensus 163 ~~~~Pv~vK--~----------~~~~e~----a~~~~~~G~d----~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 222 (308)
.+++|+++- . -.+++. ++.+.+.|+| .|.+--. +.+.++.+.. .+|
T Consensus 174 ~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaELGADs~~tivK~~y~------------e~f~~Vv~a~--~vP 239 (307)
T 3fok_A 174 AAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGLGNDSSYTWMKLPVV------------EEMERVMEST--TMP 239 (307)
T ss_dssp HTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTCSSCCSSEEEEEECC------------TTHHHHGGGC--SSC
T ss_pred HcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHHhCCCcCCCEEEeCCc------------HHHHHHHHhC--CCC
Confidence 468998774 1 134443 6778899999 8886211 2345555544 689
Q ss_pred EEEecCCC--CHHHHH----HHHH-cCCCEEEEchHHHH
Q 021739 223 VFLDGGVR--RGTDVF----KALA-LGASGVFVGRPVPF 254 (308)
Q Consensus 223 via~GGI~--~~~d~~----k~l~-~GAd~V~ig~~~l~ 254 (308)
++..||=. +.++++ +++. .||.++.+||-+++
T Consensus 240 VViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNIfQ 278 (307)
T 3fok_A 240 TLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLLY 278 (307)
T ss_dssp EEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTSS
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhhcc
Confidence 88888876 445555 5566 59999999998876
No 406
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=91.73 E-value=0.7 Score=43.26 Aligned_cols=90 Identities=10% Similarity=0.106 Sum_probs=66.3
Q ss_pred cCHHHHHHHHHhc--CCCEEEEec--CCHHHH----HHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeE
Q 021739 152 LNWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 152 ~~~~~i~~ir~~~--~~Pv~vK~~--~~~e~a----~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipv 223 (308)
...+.++++|+.+ +++|.+-.. .+.+++ +.+.+.|+++|.-- + -.+.++..+.++++.+ ++||
T Consensus 198 ~d~e~v~avR~a~g~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP------~-~~~~~~~~~~~l~~~~--~iPI 268 (410)
T 3dip_A 198 DGLEPFRKIRAAVGQRIEIMCELHSLWGTHAAARICNALADYGVLWVEDP------I-AKMDNIPAVADLRRQT--RAPI 268 (410)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEECTTCBCHHHHHHHHHHGGGGTCSEEECC------B-SCTTCHHHHHHHHHHH--CCCE
T ss_pred HHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHHhcCCCEEECC------C-CCcccHHHHHHHHhhC--CCCE
Confidence 3467899999986 578887653 455554 55667899888611 0 0112466777777766 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 224 FLDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
++++.+.+..|+.++++.| +|.|++--
T Consensus 269 a~dE~~~~~~~~~~~l~~~~~d~v~~k~ 296 (410)
T 3dip_A 269 CGGENLAGTRRFHEMLCADAIDFVMLDL 296 (410)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEEEECT
T ss_pred EecCCcCCHHHHHHHHHcCCCCeEeecc
Confidence 9999999999999999987 89999843
No 407
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=91.68 E-value=3.7 Score=36.73 Aligned_cols=67 Identities=13% Similarity=0.017 Sum_probs=46.5
Q ss_pred HHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEe---cCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 021739 178 DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLD---GGVRRGTDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 178 ~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~---GGI~~~~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
.++...++|||.|-+.+ +.+.+.+.++.+.+ ++|++++ +|-...-+..+.-++|...|..|...+.
T Consensus 176 Ra~ay~~AGAD~if~~~---------~~~~ee~~~~~~~~--~~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~r 244 (298)
T 3eoo_A 176 RAIAYVEAGADMIFPEA---------MKTLDDYRRFKEAV--KVPILANLTEFGSTPLFTLDELKGANVDIALYCCGAYR 244 (298)
T ss_dssp HHHHHHHTTCSEEEECC---------CCSHHHHHHHHHHH--CSCBEEECCTTSSSCCCCHHHHHHTTCCEEEECSHHHH
T ss_pred HHHhhHhcCCCEEEeCC---------CCCHHHHHHHHHHc--CCCeEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHHH
Confidence 46777899999998743 23577788888777 5787664 3322112344555789999999987776
Q ss_pred h
Q 021739 255 S 255 (308)
Q Consensus 255 ~ 255 (308)
+
T Consensus 245 a 245 (298)
T 3eoo_A 245 A 245 (298)
T ss_dssp H
T ss_pred H
Confidence 5
No 408
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=91.64 E-value=5 Score=35.64 Aligned_cols=76 Identities=18% Similarity=0.140 Sum_probs=50.0
Q ss_pred HHHHHHHHcCCcEEEEecccccCCCCC-cchHHHHHHHHHHccCC-CeEEEecCCCCHHHHHHHH----HcCCCEEEEch
Q 021739 177 EDASLAIQYGAAGIIVSNHGARQLDYV-PATVMALEEVVQAAKGR-VPVFLDGGVRRGTDVFKAL----ALGASGVFVGR 250 (308)
Q Consensus 177 e~a~~~~~~G~d~i~v~~~gg~~~~~~-~~~~~~l~~i~~~~~~~-ipvia~GGI~~~~d~~k~l----~~GAd~V~ig~ 250 (308)
.+++.+.+.|||-|.+.-.-|.-.++. ..-.+.|..++++.... +.+|..-+.-+.+++.++- ++|||+|--.+
T Consensus 130 ~Ea~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTST 209 (288)
T 3oa3_A 130 SEAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTADEIIAGCVLSSLAGADYVKTST 209 (288)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCC
T ss_pred HHHHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHHHHHHHHHHcCCCEEEcCC
Confidence 468889999999999754322100111 11234556666665433 7889888888888866543 47999998887
Q ss_pred HH
Q 021739 251 PV 252 (308)
Q Consensus 251 ~~ 252 (308)
.|
T Consensus 210 Gf 211 (288)
T 3oa3_A 210 GF 211 (288)
T ss_dssp SS
T ss_pred CC
Confidence 55
No 409
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=91.55 E-value=2 Score=37.12 Aligned_cols=77 Identities=14% Similarity=0.062 Sum_probs=52.2
Q ss_pred HHHHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccC-CCeEEEecCCCCHHHHHHH----HHcCCCEEEEch
Q 021739 177 EDASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKG-RVPVFLDGGVRRGTDVFKA----LALGASGVFVGR 250 (308)
Q Consensus 177 e~a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~-~ipvia~GGI~~~~d~~k~----l~~GAd~V~ig~ 250 (308)
.+++.+.+.|||.|.+.-.-|.-.++.. ...+.|..++++..+ -+++|..-|.-+.+++.++ .++|||+|-..+
T Consensus 99 ~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKTST 178 (239)
T 3ngj_A 99 YETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKTST 178 (239)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCC
T ss_pred HHHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHHHHHHCcCEEECCC
Confidence 4688899999999997643221011111 123445666666533 2788888888888998888 678999999987
Q ss_pred HHH
Q 021739 251 PVP 253 (308)
Q Consensus 251 ~~l 253 (308)
.|-
T Consensus 179 Gf~ 181 (239)
T 3ngj_A 179 GFG 181 (239)
T ss_dssp SSS
T ss_pred CCC
Confidence 763
No 410
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=91.51 E-value=7.4 Score=34.86 Aligned_cols=180 Identities=14% Similarity=0.107 Sum_probs=110.0
Q ss_pred CceEeccccCcccCCCHHHHHHHHHHHHcCCceee--c---CCCCCCHHHHhc-------c-CCC-CceEEeeecCCchH
Q 021739 12 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--S---SWATSSVEEVSS-------T-GPG-IRFFQLYVTKHRNV 77 (308)
Q Consensus 12 ~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~--s---~~~~~~~e~i~~-------~-~~~-~~~~Ql~~~~d~~~ 77 (308)
.|.++.||.-.+-.+.+.-..+.+-..+.|+...+ + |..+.+.+|..+ . ... +.+.... ..+.+.
T Consensus 29 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~~t~~ 107 (315)
T 3na8_A 29 IGYTITPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVS-DLTTAK 107 (315)
T ss_dssp EEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHH
T ss_pred EEEeeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHH
Confidence 36777888644435555556777777888986544 2 234556655332 1 222 6777765 456777
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHH
Q 021739 78 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 157 (308)
Q Consensus 78 ~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 157 (308)
..++.+.+++.|++++.+. .|... + .. ++ -..+..
T Consensus 108 ai~la~~A~~~Gadavlv~--~P~y~--------------~-------------------~s-~~---------~l~~~f 142 (315)
T 3na8_A 108 TVRRAQFAESLGAEAVMVL--PISYW--------------K-------------------LN-EA---------EVFQHY 142 (315)
T ss_dssp HHHHHHHHHHTTCSEEEEC--CCCSS--------------C-------------------CC-HH---------HHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEC--CCCCC--------------C-------------------CC-HH---------HHHHHH
Confidence 8888899999999998764 34320 0 00 11 123567
Q ss_pred HHHHHhcCCCEEEEec-------CCHHHHHHH-HHcC-CcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecC
Q 021739 158 KWLQTITSLPILVKGV-------LTAEDASLA-IQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGG 228 (308)
Q Consensus 158 ~~ir~~~~~Pv~vK~~-------~~~e~a~~~-~~~G-~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GG 228 (308)
+.|.+.+++||++=.+ ++++...++ .+.. +-+|.-+. .+...+.++.+...+++.|+. |.
T Consensus 143 ~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L~a~~pnIvgiKdss----------gd~~~~~~~~~~~~~~f~v~~-G~ 211 (315)
T 3na8_A 143 RAVGEAIGVPVMLYNNPGTSGIDMSVELILRIVREVDNVTMVKEST----------GDIQRMHKLRLLGEGRVPFYN-GC 211 (315)
T ss_dssp HHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHSTTEEEEEECS----------SCHHHHHHHHHHTTTCSCEEE-CC
T ss_pred HHHHHhCCCcEEEEeCcchhCcCCCHHHHHHHHhcCCCEEEEECCC----------CCHHHHHHHHHHcCCCEEEEe-Cc
Confidence 8888888999987653 567887777 5532 33333211 134445555555555666665 32
Q ss_pred CCCHHHHHHHHHcCCCEEEEchH
Q 021739 229 VRRGTDVFKALALGASGVFVGRP 251 (308)
Q Consensus 229 I~~~~d~~k~l~~GAd~V~ig~~ 251 (308)
-..+..++.+|++++.-+..
T Consensus 212 ---D~~~l~~l~~G~~G~is~~a 231 (315)
T 3na8_A 212 ---NPLALEAFVAGAKGWCSAAP 231 (315)
T ss_dssp ---GGGHHHHHHHTCSEEEESGG
T ss_pred ---hHHHHHHHHCCCCEEEechh
Confidence 23467788899999988874
No 411
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=91.51 E-value=0.62 Score=43.19 Aligned_cols=40 Identities=10% Similarity=-0.036 Sum_probs=34.7
Q ss_pred HHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcC-CcEEEEe
Q 021739 154 WKDVKWLQTITSLPILVKGVLTAEDASLAIQYG-AAGIIVS 193 (308)
Q Consensus 154 ~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G-~d~i~v~ 193 (308)
++.++++|+.+++||+.-+..+++++..+.+.| +|+|.+.
T Consensus 288 ~~~~~~ik~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~ig 328 (377)
T 2r14_A 288 EGFREQMRQRFKGGLIYCGNYDAGRAQARLDDNTADAVAFG 328 (377)
T ss_dssp TTHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCceEEeec
Confidence 467889999999999988777899999999988 9999763
No 412
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=91.50 E-value=0.94 Score=40.22 Aligned_cols=90 Identities=16% Similarity=0.130 Sum_probs=51.3
Q ss_pred HHHHHHHcCCcEEEEecccccCCCCCc-chHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHH
Q 021739 178 DASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPV 252 (308)
Q Consensus 178 ~a~~~~~~G~d~i~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~ 252 (308)
.++.+.+.|+|+|.+.++.|....-.. ...+.+..+.+...+ -+...|+.. ..++++ +-.+|||++++-.|.
T Consensus 24 lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--vi~Gvg~~~-t~~ai~la~~A~~~Gadavlv~~P~ 100 (286)
T 2r91_A 24 HVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR--VIVQVASLN-ADEAIALAKYAESRGAEAVASLPPY 100 (286)
T ss_dssp HHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS--EEEECCCSS-HHHHHHHHHHHHHTTCSEEEECCSC
T ss_pred HHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--EEEeeCCCC-HHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 356778899999998776653211111 112334444555433 344444444 444442 334799999999998
Q ss_pred HHh-cccCCHHHHHHHHHHHHH
Q 021739 253 PFS-LAVDGEAGVRKVLQMLRD 273 (308)
Q Consensus 253 l~~-~~~~G~~~v~~~i~~l~~ 273 (308)
++. . .++++.++++.+.+
T Consensus 101 y~~~~---s~~~l~~~f~~va~ 119 (286)
T 2r91_A 101 YFPRL---SERQIAKYFRDLCS 119 (286)
T ss_dssp SSTTC---CHHHHHHHHHHHHH
T ss_pred CCCCC---CHHHHHHHHHHHHH
Confidence 864 2 45555555555443
No 413
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=91.43 E-value=0.34 Score=41.93 Aligned_cols=60 Identities=25% Similarity=0.319 Sum_probs=41.2
Q ss_pred HHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHH----------HHHHHHcCCCEEEEchH
Q 021739 182 AIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTD----------VFKALALGASGVFVGRP 251 (308)
Q Consensus 182 ~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d----------~~k~l~~GAd~V~ig~~ 251 (308)
..+.|.++++.+. ..+.++++.. +..+++.+|||+-... ..+++.+|||.+.+||+
T Consensus 151 ~~~~G~~g~v~~~-------------~~i~~lr~~~-~~~~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aGad~iVvGr~ 216 (239)
T 1dbt_A 151 AEESGLDGVVCSV-------------HEAKAIYQAV-SPSFLTVTPGIRMSEDAANDQVRVATPAIAREKGSSAIVVGRS 216 (239)
T ss_dssp HHHTTCSEEECCG-------------GGHHHHTTTS-CTTCEEEECCBCCTTSCCTTCSSCBCHHHHHHTTCSEEEECHH
T ss_pred HHHhCCCEEEECH-------------HHHHHHHHhc-CCCcEEEeCCcCCCCCCccceeccCCHHHHHHcCCCEEEEChh
Confidence 4567888875432 2234444433 2468999999985433 36778999999999999
Q ss_pred HHHh
Q 021739 252 VPFS 255 (308)
Q Consensus 252 ~l~~ 255 (308)
++.+
T Consensus 217 I~~a 220 (239)
T 1dbt_A 217 ITKA 220 (239)
T ss_dssp HHTS
T ss_pred hcCC
Confidence 8863
No 414
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=91.33 E-value=0.79 Score=43.16 Aligned_cols=87 Identities=10% Similarity=-0.081 Sum_probs=63.2
Q ss_pred HHHHHHHHHhc--CCCEEEEec--CCHHHH----HHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEE
Q 021739 154 WKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 225 (308)
Q Consensus 154 ~~~i~~ir~~~--~~Pv~vK~~--~~~e~a----~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia 225 (308)
.+.++++|+.+ +++|.+... .+.+++ +.+.+.|+++|.-- . .+..+..+.++++.+ .+||++
T Consensus 215 ~e~v~avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP------~--~~~d~~~~~~l~~~~--~iPIa~ 284 (426)
T 4e4f_A 215 PKLFEAVRDKFGFNEHLLHDMHHRLTPIEAARFGKSVEDYRLFWMEDP------T--PAENQACFRLIRQHT--VTPIAV 284 (426)
T ss_dssp HHHHHHHHHHHTTSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEECC------S--CCSSGGGGHHHHTTC--CSCEEE
T ss_pred HHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEECC------C--ChHHHHHHHHHHhcC--CCCEEe
Confidence 56799999986 688988754 455554 55667888888511 0 112344556666554 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 226 DGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
++.+.+..|+.++++.| +|.|++--
T Consensus 285 dE~~~~~~~~~~~i~~ga~d~v~~k~ 310 (426)
T 4e4f_A 285 GEVFNSIWDCKQLIEEQLIDYIRTTI 310 (426)
T ss_dssp CTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred CCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 99999999999999987 78888743
No 415
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=91.18 E-value=4.4 Score=35.98 Aligned_cols=110 Identities=17% Similarity=0.240 Sum_probs=73.7
Q ss_pred CCHHHHHHHH-HcCCcEEEEecccccCCCCC--cchHHHHHHHHHHccCCCeEEEecCCC-CHHHHHHHHHcCCCEEEEc
Q 021739 174 LTAEDASLAI-QYGAAGIIVSNHGARQLDYV--PATVMALEEVVQAAKGRVPVFLDGGVR-RGTDVFKALALGASGVFVG 249 (308)
Q Consensus 174 ~~~e~a~~~~-~~G~d~i~v~~~gg~~~~~~--~~~~~~l~~i~~~~~~~ipvia~GGI~-~~~d~~k~l~~GAd~V~ig 249 (308)
.+|+++.... +.|+|.+-++.+.-+..+.+ .-.++.|.++++.+ ++|++.=||=. ..+++.+++..|..=+-++
T Consensus 155 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~~--~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~ 232 (286)
T 1gvf_A 155 TDPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVV--DVPLVLHGASDVPDEFVRRTIELGVTKVNVA 232 (286)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHHC--CSCEEECCCTTCCHHHHHHHHHTTEEEEEEC
T ss_pred CCHHHHHHHHHHHCCCEEEeecCccccCcCCCCccCHHHHHHHHHhc--CCCEEEECCCCCCHHHHHHHHHCCCeEEEEC
Confidence 4578877665 79999999875322222222 23678889998877 79999888543 3566889999999999999
Q ss_pred hHHHHhcc-------cC-----CHH-HHHHHHHHHHHHHHHHHHHcCCC
Q 021739 250 RPVPFSLA-------VD-----GEA-GVRKVLQMLRDEFELTMALSGCR 285 (308)
Q Consensus 250 ~~~l~~~~-------~~-----G~~-~v~~~i~~l~~~l~~~m~~~G~~ 285 (308)
+-+-++.. .. .+. -+....+.+++.++..|+.+|..
T Consensus 233 Tdl~~a~~~~~r~~~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~ 281 (286)
T 1gvf_A 233 TELKIAFAGAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSA 281 (286)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred hHHHHHHHHHHHHHHHhCcccCChHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 97654321 00 121 13334456777777888888764
No 416
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=91.18 E-value=7.7 Score=34.40 Aligned_cols=181 Identities=18% Similarity=0.154 Sum_probs=108.6
Q ss_pred CceEeccccCcccCCCHHHHHHHHHHHHcCCceee--cC---CCCCCHHHHhc-------c-CCC-CceEEeeecCCchH
Q 021739 12 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVSS-------T-GPG-IRFFQLYVTKHRNV 77 (308)
Q Consensus 12 ~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~--s~---~~~~~~e~i~~-------~-~~~-~~~~Ql~~~~d~~~ 77 (308)
.|.++.||.-.+-.+.+.-..+.+-..+.|+...+ ++ ..+.+.+|..+ . ... +.+.... ..+.+.
T Consensus 12 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 90 (297)
T 3flu_A 12 LVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTG-ANNTVE 90 (297)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHH
T ss_pred EEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHH
Confidence 35677888644335555556677777788986443 22 24556655332 1 222 5676654 456777
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHH
Q 021739 78 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 157 (308)
Q Consensus 78 ~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 157 (308)
..++.+.+++.|++++.+. .|... + .. ++- ..+..
T Consensus 91 ai~la~~a~~~Gadavlv~--~P~y~--------------~-------------------~~-~~~---------l~~~f 125 (297)
T 3flu_A 91 AIALSQAAEKAGADYTLSV--VPYYN--------------K-------------------PS-QEG---------IYQHF 125 (297)
T ss_dssp HHHHHHHHHHTTCSEEEEE--CCCSS--------------C-------------------CC-HHH---------HHHHH
T ss_pred HHHHHHHHHHcCCCEEEEC--CCCCC--------------C-------------------CC-HHH---------HHHHH
Confidence 8888899999999998765 34320 0 00 111 13567
Q ss_pred HHHHHhcCCCEEEEec-------CCHHHHHHHHHcC-CcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCC
Q 021739 158 KWLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 229 (308)
Q Consensus 158 ~~ir~~~~~Pv~vK~~-------~~~e~a~~~~~~G-~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI 229 (308)
+.|.+.+++||++=.. ++++...++.+.. +-+|.-+. .++..+.++.+..+.++.|+ +|
T Consensus 126 ~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiKdss----------gd~~~~~~~~~~~~~~f~v~-~G-- 192 (297)
T 3flu_A 126 KTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAEIPNIVGVKEAS----------GNIGSNIELINRAPEGFVVL-SG-- 192 (297)
T ss_dssp HHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTTSTTEEEEEECS----------CCHHHHHHHHHHSCTTCEEE-EC--
T ss_pred HHHHHhCCCCEEEEECCchhccCCCHHHHHHHHcCCCEEEEEeCC----------CCHHHHHHHHHhcCCCeEEE-EC--
Confidence 7888888999987653 5678777776532 22222111 13444555555554456654 34
Q ss_pred CCHHHHHHHHHcCCCEEEEchHH
Q 021739 230 RRGTDVFKALALGASGVFVGRPV 252 (308)
Q Consensus 230 ~~~~d~~k~l~~GAd~V~ig~~~ 252 (308)
+..-+..++.+|++++.-+..-
T Consensus 193 -~d~~~l~~l~~G~~G~is~~an 214 (297)
T 3flu_A 193 -DDHTALPFMLCGGHGVITVAAN 214 (297)
T ss_dssp -CGGGHHHHHHTTCCEEEESGGG
T ss_pred -cHHHHHHHHhCCCCEEEechHh
Confidence 2344678889999999877743
No 417
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=91.05 E-value=1.1 Score=41.19 Aligned_cols=79 Identities=9% Similarity=0.004 Sum_probs=50.3
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
.|.+.+.++++...+.|++++.+.- +-.. ...+ ..+-
T Consensus 77 ID~~al~~lv~~li~~Gv~Gl~v~G-TTGE--------------------------------------~~~L----s~eE 113 (360)
T 4dpp_A 77 FDLEAYDDLVNIQIQNGAEGVIVGG-TTGE--------------------------------------GQLM----SWDE 113 (360)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESS-TTTT--------------------------------------GGGS----CHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEecc-cccC--------------------------------------hhhC----CHHH
Confidence 3778899999998899999987742 1110 0011 1111
Q ss_pred CHHHHHHHHHhc--CCCEEEEec-CCH----HHHHHHHHcCCcEEEEec
Q 021739 153 NWKDVKWLQTIT--SLPILVKGV-LTA----EDASLAIQYGAAGIIVSN 194 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~-~~~----e~a~~~~~~G~d~i~v~~ 194 (308)
-.+.++.+.+.. ++||++... .+. +.++.+.++|+|++.+..
T Consensus 114 r~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~ 162 (360)
T 4dpp_A 114 HIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 162 (360)
T ss_dssp HHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 123455555544 589998765 333 457888899999998864
No 418
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=91.03 E-value=7.8 Score=34.21 Aligned_cols=181 Identities=18% Similarity=0.185 Sum_probs=108.4
Q ss_pred CceEeccccCcccCCCHHHHHHHHHHHHcCCceee--cC---CCCCCHHHHhc-------c-CCC-CceEEeeecCCchH
Q 021739 12 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVSS-------T-GPG-IRFFQLYVTKHRNV 77 (308)
Q Consensus 12 ~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~--s~---~~~~~~e~i~~-------~-~~~-~~~~Ql~~~~d~~~ 77 (308)
.|-++.||.-.+-.+.+.-..+.+-..+.|+...+ ++ ..+.+.+|..+ . ... +.+.... ..+.+.
T Consensus 6 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ 84 (291)
T 3tak_A 6 IVAIVTPMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTG-ANSTRE 84 (291)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHH
T ss_pred EeeeECCCCCCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHH
Confidence 35677888644435665556777777788986544 22 23456665332 1 222 5666654 446777
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHH
Q 021739 78 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 157 (308)
Q Consensus 78 ~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 157 (308)
..++.+.+++.|++++.+. .|... + .. ++- ..+..
T Consensus 85 ai~la~~a~~~Gadavlv~--~P~y~--------------~-------------------~~-~~~---------l~~~f 119 (291)
T 3tak_A 85 AIELTKAAKDLGADAALLV--TPYYN--------------K-------------------PT-QEG---------LYQHY 119 (291)
T ss_dssp HHHHHHHHHHHTCSEEEEE--CCCSS--------------C-------------------CC-HHH---------HHHHH
T ss_pred HHHHHHHHHhcCCCEEEEc--CCCCC--------------C-------------------CC-HHH---------HHHHH
Confidence 7888899999999998765 34320 0 00 111 13567
Q ss_pred HHHHHhcCCCEEEEec-------CCHHHHHHHHHcC-CcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCC
Q 021739 158 KWLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 229 (308)
Q Consensus 158 ~~ir~~~~~Pv~vK~~-------~~~e~a~~~~~~G-~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI 229 (308)
+.|.+.+++||++=.. ++++...++.+.. +-+|.-+. .+...+.++.+..++++.|+ +|.
T Consensus 120 ~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK~ss----------gd~~~~~~~~~~~~~~f~v~-~G~- 187 (291)
T 3tak_A 120 KAIAEAVELPLILYNVPGRTGVDLSNDTAVRLAEIPNIVGIKDAT----------GDVPRGKALIDALNGKMAVY-SGD- 187 (291)
T ss_dssp HHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHTTSTTEEEEEECS----------CCHHHHHHHHHHHTTSSEEE-ECC-
T ss_pred HHHHHhcCCCEEEEecccccCCCCCHHHHHHHHcCCCEEEEEeCC----------CCHHHHHHHHHHcCCCeEEE-ECc-
Confidence 8888888999987543 5678777776532 22222111 12444455555444456654 342
Q ss_pred CCHHHHHHHHHcCCCEEEEchHH
Q 021739 230 RRGTDVFKALALGASGVFVGRPV 252 (308)
Q Consensus 230 ~~~~d~~k~l~~GAd~V~ig~~~ 252 (308)
...+..++.+|++++.-+..-
T Consensus 188 --d~~~~~~l~~G~~G~is~~~n 208 (291)
T 3tak_A 188 --DETAWELMLLGADGNISVTAN 208 (291)
T ss_dssp --HHHHHHHHHTTCCEEEESGGG
T ss_pred --HHHHHHHHHCCCCEEEechhh
Confidence 455678889999999877643
No 419
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=90.99 E-value=0.68 Score=41.80 Aligned_cols=86 Identities=12% Similarity=-0.014 Sum_probs=52.0
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
..+.+...+.+++..+.|++.|+|+...-.+|...+ ...+..+-...
T Consensus 45 ~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~---------------------------------~~~V~~~eE~~ 91 (314)
T 3tr9_A 45 HLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIK---------------------------------TDSPSTQIELD 91 (314)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC--------------------------------------CHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccc---------------------------------cCCCCHHHHHH
Confidence 446666666677777899999999864222210000 00011100111
Q ss_pred cCHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEE
Q 021739 152 LNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGII 191 (308)
Q Consensus 152 ~~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~ 191 (308)
.....|+.+++.+++||++ ....++.++.+.++|++.|.
T Consensus 92 Rv~pvI~~l~~~~~vpISI-DT~~~~Va~aAl~aGa~iIN 130 (314)
T 3tr9_A 92 RLLPVIDAIKKRFPQLISV-DTSRPRVMREAVNTGADMIN 130 (314)
T ss_dssp HHHHHHHHHHHHCCSEEEE-ECSCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHhhCCCeEEE-eCCCHHHHHHHHHcCCCEEE
Confidence 1234677888778899886 45678889999999998764
No 420
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=90.97 E-value=2.5 Score=37.83 Aligned_cols=94 Identities=16% Similarity=0.166 Sum_probs=60.8
Q ss_pred HHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEeccc------ccCCCCCcchHHH-HHHHHHHcc--CCCeEEEe
Q 021739 156 DVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHG------ARQLDYVPATVMA-LEEVVQAAK--GRVPVFLD 226 (308)
Q Consensus 156 ~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~g------g~~~~~~~~~~~~-l~~i~~~~~--~~ipvia~ 226 (308)
.++++.+.-+.|+++-+..+.-.|+.+.++|+|+|.+++.+ |. .|.+..+++. +..+....+ .++||+++
T Consensus 8 ~Lr~ll~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~~~~G~-pD~~~vt~~em~~~~~~I~~~~~~~PviaD 86 (302)
T 3fa4_A 8 SLRRALENPDSFIVAPGVYDGLSARVALSAGFDALYMTGAGTAASVHGQ-ADLGICTLNDMRANAEMISNISPSTPVIAD 86 (302)
T ss_dssp HHHHHHHSTTCCEEEEEECSHHHHHHHHTTTCSCEEECHHHHHHHHHSC-CSSSCCCHHHHHHHHHHHHTTSTTSCEEEE
T ss_pred HHHHHHhCCCCeEEEecCcCHHHHHHHHHcCCCEEEeCcHHHHHHHcCC-CCCCcCCHHHHHHHHHHHHhhccCCCEEEE
Confidence 45555554456787777888999999999999999997532 21 1333444443 333332222 27999999
Q ss_pred c--CCCCHHHHH----HHHHcCCCEEEEch
Q 021739 227 G--GVRRGTDVF----KALALGASGVFVGR 250 (308)
Q Consensus 227 G--GI~~~~d~~----k~l~~GAd~V~ig~ 250 (308)
. |..++.++. +....||++|.|=-
T Consensus 87 ~d~Gyg~~~~v~~tv~~l~~aGaagv~iED 116 (302)
T 3fa4_A 87 ADTGYGGPIMVARTTEQYSRSGVAAFHIED 116 (302)
T ss_dssp CTTTTSSHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCcEEEECC
Confidence 8 444665544 44458999998764
No 421
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=90.87 E-value=0.38 Score=42.15 Aligned_cols=40 Identities=30% Similarity=0.338 Sum_probs=33.7
Q ss_pred HHHHHHHHHhcCCCEEEEec-CCHHHHHHHHHcCCcEEEEec
Q 021739 154 WKDVKWLQTITSLPILVKGV-LTAEDASLAIQYGAAGIIVSN 194 (308)
Q Consensus 154 ~~~i~~ir~~~~~Pv~vK~~-~~~e~a~~~~~~G~d~i~v~~ 194 (308)
.+.++++|+.+++|+.+... .++++++.+.+ ++|++++..
T Consensus 188 ~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGS 228 (252)
T 3tha_A 188 QDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRK-VADGVIVGT 228 (252)
T ss_dssp HHHHHHHHTTCCSCEEEESSCCSHHHHHHHTT-TSSEEEECH
T ss_pred HHHHHHHHHhcCCcEEEEcCcCCHHHHHHHHh-cCCEEEECH
Confidence 46799999999999999865 58999998876 699999854
No 422
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=90.86 E-value=2.1 Score=39.36 Aligned_cols=42 Identities=21% Similarity=0.351 Sum_probs=34.2
Q ss_pred hHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 021739 206 TVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGR 250 (308)
Q Consensus 206 ~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~ 250 (308)
.++.+.++++.. ++||+. +++.+.+++..+.++|||++.++.
T Consensus 213 ~~~~i~~l~~~~--~~pv~v-K~~~~~e~a~~a~~~Gad~I~vs~ 254 (370)
T 1gox_A 213 SWKDVAWLQTIT--SLPILV-KGVITAEDARLAVQHGAAGIIVSN 254 (370)
T ss_dssp CHHHHHHHHHHC--CSCEEE-ECCCSHHHHHHHHHTTCSEEEECC
T ss_pred hHHHHHHHHHHh--CCCEEE-EecCCHHHHHHHHHcCCCEEEECC
Confidence 345667776665 789986 778999999999999999999954
No 423
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=90.80 E-value=4.1 Score=36.80 Aligned_cols=109 Identities=11% Similarity=0.154 Sum_probs=73.5
Q ss_pred CCHHHHHHHH-HcCCcEEEEecccccCCCC--Ccc----hHHHHHHHHHHccCCCeEEEec-------------------
Q 021739 174 LTAEDASLAI-QYGAAGIIVSNHGARQLDY--VPA----TVMALEEVVQAAKGRVPVFLDG------------------- 227 (308)
Q Consensus 174 ~~~e~a~~~~-~~G~d~i~v~~~gg~~~~~--~~~----~~~~l~~i~~~~~~~ipvia~G------------------- 227 (308)
.+|+++.... +.|+|.+-++.+.-+..+. +.| .++.|.++.+.+ ++|++.=|
T Consensus 153 TdPeea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~--~vpLVlHGgSsvp~~~~~~~~~~gg~~ 230 (323)
T 2isw_A 153 TEPQDAKKFVELTGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLT--GIPLVMHGSSSVPKDVKDMINKYGGKM 230 (323)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHH--CSCEEECSCCCCCHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHHHCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHh--CCCeEEECCCCCCHHHHHHHHHhcccc
Confidence 4678877665 6999999987532222221 222 367788888877 79999998
Q ss_pred ----CCCCHHHHHHHHHcCCCEEEEchHHHHhcc--------cC----CH-HHHHHHHHHHHHHHHHHHHHcCCC
Q 021739 228 ----GVRRGTDVFKALALGASGVFVGRPVPFSLA--------VD----GE-AGVRKVLQMLRDEFELTMALSGCR 285 (308)
Q Consensus 228 ----GI~~~~d~~k~l~~GAd~V~ig~~~l~~~~--------~~----G~-~~v~~~i~~l~~~l~~~m~~~G~~ 285 (308)
|+. .+++.+++..|..=|-+++-+-++.. .. .+ .-+....+.+++.++..|+.+|..
T Consensus 231 ~~~~Gvp-~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~~~~~~dpr~~l~~~~~a~~~~v~~~~~~~gs~ 304 (323)
T 2isw_A 231 PDAVGVP-IESIVHAIGEGVCKINVDSDSRMAMTGAIRKVFVEHPEKFDPRDYLGPGRDAITEMLIPKIKAFGSA 304 (323)
T ss_dssp TTCBCCC-HHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCTHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred ccCCCCC-HHHHHHHHHCCCeEEEEChHHHHHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 544 68899999999999999996644321 00 11 123444467788888888888864
No 424
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=90.80 E-value=2.5 Score=35.68 Aligned_cols=86 Identities=19% Similarity=0.044 Sum_probs=55.2
Q ss_pred HHHHHHHHhc-CCCE--EEEecCCH-HHHHHHHHcCCcEEEEecccccCCCCCcchHH-HHHHHHHHccCCCeEEE-ecC
Q 021739 155 KDVKWLQTIT-SLPI--LVKGVLTA-EDASLAIQYGAAGIIVSNHGARQLDYVPATVM-ALEEVVQAAKGRVPVFL-DGG 228 (308)
Q Consensus 155 ~~i~~ir~~~-~~Pv--~vK~~~~~-e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~-~l~~i~~~~~~~ipvia-~GG 228 (308)
+.|+++|+.+ +.|+ -+|....+ ..++.+.++|+|+|+++..++ ..+.. .+..+++ . .+..+. .=|
T Consensus 48 ~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh~~~~------~~~~~~~~~~~~~-~--g~~~~~d~l~ 118 (218)
T 3jr2_A 48 KAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWITVSAAAH------IATIAACKKVADE-L--NGEIQIEIYG 118 (218)
T ss_dssp HHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEEEEETTSC------HHHHHHHHHHHHH-H--TCEEEEECCS
T ss_pred HHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEEEEecCCC------HHHHHHHHHHHHH-h--CCccceeeee
Confidence 6789998874 5555 45655334 357899999999999875431 11222 2233332 2 455543 345
Q ss_pred CCCHHHHHHHHHcCCCEEEEc
Q 021739 229 VRRGTDVFKALALGASGVFVG 249 (308)
Q Consensus 229 I~~~~d~~k~l~~GAd~V~ig 249 (308)
+.|++++.++...|+|.+.+.
T Consensus 119 ~~T~~~~~~~~~~g~d~v~~~ 139 (218)
T 3jr2_A 119 NWTMQDAKAWVDLGITQAIYH 139 (218)
T ss_dssp SCCHHHHHHHHHTTCCEEEEE
T ss_pred cCCHHHHHHHHHcCccceeee
Confidence 578889998888999987653
No 425
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=90.78 E-value=3.7 Score=34.68 Aligned_cols=41 Identities=24% Similarity=0.271 Sum_probs=33.1
Q ss_pred HHHHHHHHHhc-----CCCEEEEecCCHHHHHHHHHcCCcEEEEec
Q 021739 154 WKDVKWLQTIT-----SLPILVKGVLTAEDASLAIQYGAAGIIVSN 194 (308)
Q Consensus 154 ~~~i~~ir~~~-----~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~ 194 (308)
++.++++|+.. ++|+++-+..+++.+..+.++|+|+++++.
T Consensus 163 ~~~i~~l~~~~~~~~~~~pi~v~GGI~~~n~~~~~~aGad~vvvgS 208 (230)
T 1rpx_A 163 VKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIEAGANALVAGS 208 (230)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEESSCCTTTHHHHHHHTCCEEEESH
T ss_pred HHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHcCCCEEEECh
Confidence 45677777765 789888777788888889999999999853
No 426
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=90.76 E-value=2.4 Score=37.17 Aligned_cols=118 Identities=14% Similarity=0.193 Sum_probs=79.2
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
..|.+...+++++++++|++++-...-.|.. +-|++ + +.+ .
T Consensus 33 ~~~~e~a~~~a~~l~~~Ga~~vk~~~fkprt--------s~~~~------------------~--g~~-----------~ 73 (262)
T 1zco_A 33 IESREQIMKVAEFLAEVGIKVLRGGAFKPRT--------SPYSF------------------Q--GYG-----------E 73 (262)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEECBSSCCCS--------STTSC------------------C--CCT-----------H
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEecccCC--------Ccccc------------------c--Ccc-----------H
Confidence 4578999999999999999987654322210 00000 0 010 1
Q ss_pred cCHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCC-
Q 021739 152 LNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVR- 230 (308)
Q Consensus 152 ~~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~- 230 (308)
..++.++++++..++|++. ...+++.+..+.+. +|.+.+..+.- .....+.++.+ .+.||+.+-|..
T Consensus 74 egl~~l~~~~~~~Gl~~~t-e~~d~~~~~~l~~~-vd~~kIga~~~-------~n~~ll~~~a~---~~kPV~lk~G~~~ 141 (262)
T 1zco_A 74 KALRWMREAADEYGLVTVT-EVMDTRHVELVAKY-SDILQIGARNS-------QNFELLKEVGK---VENPVLLKRGMGN 141 (262)
T ss_dssp HHHHHHHHHHHHHTCEEEE-ECCCGGGHHHHHHH-CSEEEECGGGT-------TCHHHHHHHTT---SSSCEEEECCTTC
T ss_pred HHHHHHHHHHHHcCCcEEE-eeCCHHhHHHHHhh-CCEEEECcccc-------cCHHHHHHHHh---cCCcEEEecCCCC
Confidence 1245677777788999875 45777888889999 99999854321 12444555543 379999999998
Q ss_pred CHHHHHHHHH
Q 021739 231 RGTDVFKALA 240 (308)
Q Consensus 231 ~~~d~~k~l~ 240 (308)
+.+++..+++
T Consensus 142 t~~e~~~Av~ 151 (262)
T 1zco_A 142 TIQELLYSAE 151 (262)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 9999998874
No 427
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=90.64 E-value=0.65 Score=41.83 Aligned_cols=85 Identities=22% Similarity=0.365 Sum_probs=54.3
Q ss_pred CCceEEeeecCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhh
Q 021739 63 GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLAS 142 (308)
Q Consensus 63 ~~~~~Ql~~~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~ 142 (308)
-|.++.+..+.+.+...++++++++.|++.|.++-..... .+
T Consensus 127 ~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~g~~~~~---------~~----------------------------- 168 (318)
T 1vhn_A 127 GKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTRTVVQ---------SF----------------------------- 168 (318)
T ss_dssp SEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESSCTTT---------TT-----------------------------
T ss_pred CCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEcCCCccc---------cC-----------------------------
Confidence 3566666654444333377788888899888876321100 00
Q ss_pred HhhhhcccccCHHHHHHHHHhcCCCEEEEec-CCHHHHHHHHH-cCCcEEEEe
Q 021739 143 YVANQIDRSLNWKDVKWLQTITSLPILVKGV-LTAEDASLAIQ-YGAAGIIVS 193 (308)
Q Consensus 143 ~~~~~~d~~~~~~~i~~ir~~~~~Pv~vK~~-~~~e~a~~~~~-~G~d~i~v~ 193 (308)
.+...|+.++++++ ++||++-+. .+.+++..+.+ .|+|+|.+.
T Consensus 169 ------~~~~~~~~i~~i~~--~ipVi~~GgI~s~~da~~~l~~~gad~V~iG 213 (318)
T 1vhn_A 169 ------TGRAEWKALSVLEK--RIPTFVSGDIFTPEDAKRALEESGCDGLLVA 213 (318)
T ss_dssp ------SSCCCGGGGGGSCC--SSCEEEESSCCSHHHHHHHHHHHCCSEEEES
T ss_pred ------CCCcCHHHHHHHHc--CCeEEEECCcCCHHHHHHHHHcCCCCEEEEC
Confidence 01112455666666 899987654 68999998888 799999873
No 428
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=90.63 E-value=8.5 Score=33.92 Aligned_cols=39 Identities=26% Similarity=0.302 Sum_probs=29.7
Q ss_pred HHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEec
Q 021739 177 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDG 227 (308)
Q Consensus 177 e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~G 227 (308)
++++.+.++|||.|.+-+ .++. ...++.+.+ ++|+|+-|
T Consensus 177 ~rA~a~~eAGA~~ivlE~---------vp~~-~a~~It~~l--~iP~igIG 215 (275)
T 3vav_A 177 RDARAVEEAGAQLIVLEA---------VPTL-VAAEVTREL--SIPTIGIG 215 (275)
T ss_dssp HHHHHHHHHTCSEEEEES---------CCHH-HHHHHHHHC--SSCEEEES
T ss_pred HHHHHHHHcCCCEEEecC---------CCHH-HHHHHHHhC--CCCEEEEc
Confidence 568889999999998753 2333 567777777 79999876
No 429
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=90.63 E-value=0.44 Score=42.35 Aligned_cols=43 Identities=12% Similarity=0.091 Sum_probs=37.9
Q ss_pred cCHHHHHHHHHhc--CCCEEEEec-CCHHHHHHHHHcCCcEEEEec
Q 021739 152 LNWKDVKWLQTIT--SLPILVKGV-LTAEDASLAIQYGAAGIIVSN 194 (308)
Q Consensus 152 ~~~~~i~~ir~~~--~~Pv~vK~~-~~~e~a~~~~~~G~d~i~v~~ 194 (308)
...+.|+++++.+ ++||++.+. .+.++++.+.++|||.|++..
T Consensus 212 v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGS 257 (286)
T 3vk5_A 212 VPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAG 257 (286)
T ss_dssp CCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESG
T ss_pred CCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECc
Confidence 4578999999999 899999964 789999999999999998854
No 430
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=90.59 E-value=3.5 Score=37.01 Aligned_cols=68 Identities=18% Similarity=0.063 Sum_probs=43.8
Q ss_pred HHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEe---cCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 021739 178 DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLD---GGVRRGTDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 178 ~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~---GGI~~~~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
.++...++|||.|-+.+ ..+.+.+.++.+.+. .+|+.++ ||-...-.+.+.-++|...|..+..++.
T Consensus 183 Ra~ay~eAGAD~ifi~~---------~~~~~~~~~i~~~~~-~~Pv~~n~~~~g~~p~~t~~eL~~lGv~~v~~~~~~~r 252 (307)
T 3lye_A 183 RLRAARDEGADVGLLEG---------FRSKEQAAAAVAALA-PWPLLLNSVENGHSPLITVEEAKAMGFRIMIFSFATLA 252 (307)
T ss_dssp HHHHHHHTTCSEEEECC---------CSCHHHHHHHHHHHT-TSCBEEEEETTSSSCCCCHHHHHHHTCSEEEEETTTHH
T ss_pred HHHHHHHCCCCEEEecC---------CCCHHHHHHHHHHcc-CCceeEEeecCCCCCCCCHHHHHHcCCeEEEEChHHHH
Confidence 35677899999998742 245677778877763 3677543 4422112234445689999988876665
Q ss_pred h
Q 021739 255 S 255 (308)
Q Consensus 255 ~ 255 (308)
+
T Consensus 253 a 253 (307)
T 3lye_A 253 P 253 (307)
T ss_dssp H
T ss_pred H
Confidence 4
No 431
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=90.56 E-value=2.7 Score=38.32 Aligned_cols=41 Identities=15% Similarity=0.061 Sum_probs=35.0
Q ss_pred cCHHHHHHHHHhcCCCEEEEec-CCHHHHHHHHHcC-CcEEEE
Q 021739 152 LNWKDVKWLQTITSLPILVKGV-LTAEDASLAIQYG-AAGIIV 192 (308)
Q Consensus 152 ~~~~~i~~ir~~~~~Pv~vK~~-~~~e~a~~~~~~G-~d~i~v 192 (308)
+.++.++++|+.+++||+.-+. .++++++.+.+.| +|+|.+
T Consensus 264 ~~~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~i 306 (343)
T 3kru_A 264 YQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNERADLVAL 306 (343)
T ss_dssp TTHHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTSCSEEEE
T ss_pred eeehHHHHHHHhcCcccceeeeeeHHHHHHHHHhchhhHHHHH
Confidence 4578889999999999988765 5799999999988 999976
No 432
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=90.49 E-value=4.4 Score=37.07 Aligned_cols=87 Identities=17% Similarity=0.181 Sum_probs=58.4
Q ss_pred HHHHHHHHHhc-CCCEEEEec--CCHHHH----HHH--HHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEE
Q 021739 154 WKDVKWLQTIT-SLPILVKGV--LTAEDA----SLA--IQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 224 (308)
Q Consensus 154 ~~~i~~ir~~~-~~Pv~vK~~--~~~e~a----~~~--~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvi 224 (308)
.+.++++|+.+ +.++.+--. .+.+++ +.+ .+.++.+|. +. -.+.+++.+.++++.. .+||.
T Consensus 175 ~~~v~avr~~~~~~~l~vDaN~~~~~~~A~~~~~~L~~~~~~i~~iE-------eP-~~~~d~~~~~~l~~~~--~ipIa 244 (365)
T 3ik4_A 175 LARLRAIHQAAPTAPLIVDGNCGYDVERALAFCAACKAESIPMVLFE-------QP-LPREDWAGMAQVTAQS--GFAVA 244 (365)
T ss_dssp HHHHHHHHHHSSSCCEEEECTTCCCHHHHHHHHHHHHHTTCCEEEEE-------CC-SCTTCHHHHHHHHHHS--SSCEE
T ss_pred HHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHhhCCCCceEEE-------CC-CCcccHHHHHHHHhhC--CCCEE
Confidence 46788888876 455655432 455554 444 344444443 10 0122567777877765 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 225 LDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 225 a~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
++--+.+..|+.+++..| +|.+++--
T Consensus 245 ~dE~~~~~~~~~~~i~~~a~d~v~ik~ 271 (365)
T 3ik4_A 245 ADESARSAHDVLRIAREGTASVINIKL 271 (365)
T ss_dssp ESTTCSSHHHHHHHHHHTCCSEEEECH
T ss_pred ECCCCCCHHHHHHHHHhCCCCEEEEcC
Confidence 999999999999999987 88888763
No 433
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=90.45 E-value=0.94 Score=40.26 Aligned_cols=41 Identities=22% Similarity=0.235 Sum_probs=35.1
Q ss_pred CHHHHHHHHHhcCCCEEEEec-CCHHHHHHHHHcCCcEEEEe
Q 021739 153 NWKDVKWLQTITSLPILVKGV-LTAEDASLAIQYGAAGIIVS 193 (308)
Q Consensus 153 ~~~~i~~ir~~~~~Pv~vK~~-~~~e~a~~~~~~G~d~i~v~ 193 (308)
.++.++++++.+++||+.-+. .+.+++..+.++|||+|.+.
T Consensus 229 ~~~~i~~i~~~~~ipvia~GGI~~~~d~~~~l~~GAd~V~vg 270 (311)
T 1ep3_A 229 ALKLIHQVAQDVDIPIIGMGGVANAQDVLEMYMAGASAVAVG 270 (311)
T ss_dssp HHHHHHHHHTTCSSCEEECSSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 367899999988999987654 58999999999999999874
No 434
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=90.43 E-value=1.6 Score=38.90 Aligned_cols=89 Identities=18% Similarity=0.274 Sum_probs=49.1
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCcc-hHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHH----HcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVPA-TVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKAL----ALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~~-~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l----~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-... ..+.+..+.+... . -+...|+.. ..++++.. .+|||++++-.|++
T Consensus 26 v~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~-g-viaGvg~~~-t~~ai~la~~A~~~Gadavlv~~P~y 102 (293)
T 1w3i_A 26 AENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTN-K-IIFQVGGLN-LDDAIRLAKLSKDFDIVGIASYAPYY 102 (293)
T ss_dssp HHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCS-C-EEEECCCSC-HHHHHHHHHHGGGSCCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcC-C-EEEecCCCC-HHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 466778999999987766532111111 1122333333332 2 334444444 44444322 26999999999988
Q ss_pred Hh-cccCCHHHHHHHHHHHHH
Q 021739 254 FS-LAVDGEAGVRKVLQMLRD 273 (308)
Q Consensus 254 ~~-~~~~G~~~v~~~i~~l~~ 273 (308)
+. . .++++.++++.+.+
T Consensus 103 ~~~~---s~~~l~~~f~~va~ 120 (293)
T 1w3i_A 103 YPRM---SEKHLVKYFKTLCE 120 (293)
T ss_dssp CSSC---CHHHHHHHHHHHHH
T ss_pred CCCC---CHHHHHHHHHHHHh
Confidence 64 2 45555555554443
No 435
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=90.30 E-value=9.6 Score=34.01 Aligned_cols=185 Identities=15% Similarity=0.126 Sum_probs=103.8
Q ss_pred CceEeccccCcccCCCHHHHHHHHHHHHcCCceee--c---CCCCCCHHHHhc-------c-CCC-CceEEeeecCCchH
Q 021739 12 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--S---SWATSSVEEVSS-------T-GPG-IRFFQLYVTKHRNV 77 (308)
Q Consensus 12 ~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~--s---~~~~~~~e~i~~-------~-~~~-~~~~Ql~~~~d~~~ 77 (308)
.|.++.||.-.+-.+.+.-..+.+-..+.|+...+ + |..+.+.+|..+ . ... +.+.... ..+.+.
T Consensus 13 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 91 (309)
T 3fkr_A 13 FPVVPTTFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTS-HYSTQV 91 (309)
T ss_dssp CCBCCCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHH
T ss_pred EEeeeCCCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecC-CchHHH
Confidence 46778888644435555556677777788875333 2 234556665332 1 222 5676664 456777
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHH
Q 021739 78 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 157 (308)
Q Consensus 78 ~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 157 (308)
..++.+.+++.|++++.+. .|..... + + . .++- ..+..
T Consensus 92 ai~la~~A~~~Gadavlv~--~Pyy~~~-------~----~-------------------~-s~~~---------l~~~f 129 (309)
T 3fkr_A 92 CAARSLRAQQLGAAMVMAM--PPYHGAT-------F----R-------------------V-PEAQ---------IFEFY 129 (309)
T ss_dssp HHHHHHHHHHTTCSEEEEC--CSCBTTT-------B----C-------------------C-CHHH---------HHHHH
T ss_pred HHHHHHHHHHcCCCEEEEc--CCCCccC-------C----C-------------------C-CHHH---------HHHHH
Confidence 7888899999999998764 3532100 0 0 0 0111 13566
Q ss_pred HHHHHhcCCCEEEEec------CCHHHHHHHHH-c-CCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCC
Q 021739 158 KWLQTITSLPILVKGV------LTAEDASLAIQ-Y-GAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 229 (308)
Q Consensus 158 ~~ir~~~~~Pv~vK~~------~~~e~a~~~~~-~-G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI 229 (308)
+.|.+.+++||++=.+ ++++...++.+ . .+-+|..... .+...+.++.+.....+..+.+|.
T Consensus 130 ~~va~a~~lPiilYn~P~tg~~l~~~~~~~La~~~pnIvgiK~~~~---------~~~~~~~~~~~~~~~~~~~~~~G~- 199 (309)
T 3fkr_A 130 ARVSDAIAIPIMVQDAPASGTALSAPFLARMAREIEQVAYFXIETP---------GAANKLRELIRLGGDAIEGPWDGE- 199 (309)
T ss_dssp HHHHHHCSSCEEEEECGGGCCCCCHHHHHHHHHHSTTEEEEEECSS---------SHHHHHHHHHHHHGGGCCEEEECG-
T ss_pred HHHHHhcCCCEEEEeCCCCCCCCCHHHHHHHHhhCCCEEEEECCCc---------chHHHHHHHHHhcCCceeeecCCc-
Confidence 7788888999887543 56788888874 2 3444432111 133444444443322232233332
Q ss_pred CCHHHHHHHHHcCCCEEEEch
Q 021739 230 RRGTDVFKALALGASGVFVGR 250 (308)
Q Consensus 230 ~~~~d~~k~l~~GAd~V~ig~ 250 (308)
+..-+...+.+|++++..|.
T Consensus 200 -d~~~l~~~l~~G~~G~i~~n 219 (309)
T 3fkr_A 200 -EAITLLADLHAGATGAMTGG 219 (309)
T ss_dssp -GGTTHHHHHHTTCCEECCCS
T ss_pred -hHHHHHHHHHCCCcEEEEhh
Confidence 00014577899999987553
No 436
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=90.25 E-value=1.4 Score=38.98 Aligned_cols=73 Identities=16% Similarity=0.213 Sum_probs=56.7
Q ss_pred EEecCCHHHHHHHHHcCCcEEEEecc--------cccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHc
Q 021739 170 VKGVLTAEDASLAIQYGAAGIIVSNH--------GARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALAL 241 (308)
Q Consensus 170 vK~~~~~e~a~~~~~~G~d~i~v~~~--------gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~ 241 (308)
++.+.++|.|+.+.++|+.+|.+--. ||. ...++.+.|.++++++ ++|||+==-|....++.-.-++
T Consensus 15 imdv~~~eqa~iae~aGa~av~~l~~~p~d~r~~gGv---~Rm~dp~~I~~I~~aV--sIPVm~k~righ~~EAqilea~ 89 (291)
T 3o07_A 15 IMDVVTPEQAKIAEKSGACAVMALESIPADMRKSGKV---CRMSDPKMIKDIMNSV--SIPVMAKVRIGHFVEAQIIEAL 89 (291)
T ss_dssp EEEESSHHHHHHHHHHTCSEEEECSSCHHHHHTTTCC---CCCCCHHHHHHHHTTC--SSCEEEEEETTCHHHHHHHHHT
T ss_pred eeecCCHHHHHHHHHhCchhhhhccCCCchhhhcCCc---cccCCHHHHHHHHHhC--CCCeEEEEecCcHHHHHHHHHc
Confidence 35668999999999999999986421 111 1235677888888777 8999999999888888777779
Q ss_pred CCCEEE
Q 021739 242 GASGVF 247 (308)
Q Consensus 242 GAd~V~ 247 (308)
|||.+-
T Consensus 90 GaD~ID 95 (291)
T 3o07_A 90 EVDYID 95 (291)
T ss_dssp TCSEEE
T ss_pred CCCEEe
Confidence 999883
No 437
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=90.24 E-value=1.3 Score=39.89 Aligned_cols=78 Identities=13% Similarity=0.094 Sum_probs=50.1
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
.|.+.+.++++...+.|+++|.+.- +- +|... .+.+-
T Consensus 30 iD~~~l~~lv~~li~~Gv~Gl~v~G-tT----------------------------------------GE~~~--Ls~eE 66 (316)
T 3e96_A 30 IDWHHYKETVDRIVDNGIDVIVPCG-NT----------------------------------------SEFYA--LSLEE 66 (316)
T ss_dssp BCHHHHHHHHHHHHTTTCCEECTTS-GG----------------------------------------GTGGG--SCHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCc-cc----------------------------------------cCccc--CCHHH
Confidence 4778899999999899999986431 00 11100 11111
Q ss_pred CHHHHHHHHHhc--CCCEEEEecCCH----HHHHHHHHcCCcEEEEe
Q 021739 153 NWKDVKWLQTIT--SLPILVKGVLTA----EDASLAIQYGAAGIIVS 193 (308)
Q Consensus 153 ~~~~i~~ir~~~--~~Pv~vK~~~~~----e~a~~~~~~G~d~i~v~ 193 (308)
-.+.++.+.+.. ++||++....+. +.++.+.++|+|++.+.
T Consensus 67 r~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~ 113 (316)
T 3e96_A 67 AKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGADAVMIH 113 (316)
T ss_dssp HHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEc
Confidence 124456565554 589999865443 44788899999999875
No 438
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=90.21 E-value=9.3 Score=33.75 Aligned_cols=179 Identities=16% Similarity=0.115 Sum_probs=107.0
Q ss_pred CceEeccccCcccCCCHHHHHHHHHHHHcCCceee--c---CCCCCCHHHHhc-------c-CCC-CceEEeeecCCchH
Q 021739 12 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--S---SWATSSVEEVSS-------T-GPG-IRFFQLYVTKHRNV 77 (308)
Q Consensus 12 ~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~--s---~~~~~~~e~i~~-------~-~~~-~~~~Ql~~~~d~~~ 77 (308)
.|.++.||.-. -.+.+.-..+.+-..+.|+...+ + |..+.+.+|..+ . ... +.+.... ..+.+.
T Consensus 8 ~~a~vTPf~~d-~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 85 (292)
T 3daq_A 8 GVALTTPFTNN-KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTG-TNDTEK 85 (292)
T ss_dssp EEECCCCEETT-EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHH
T ss_pred EEeeecCcCCC-CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHH
Confidence 35677787544 34555556677777788976543 2 234556665332 1 222 6676654 456777
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHH
Q 021739 78 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 157 (308)
Q Consensus 78 ~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 157 (308)
..++.+.+++.|++++.+. .|... + .. ++- ..+..
T Consensus 86 ai~la~~a~~~Gadavlv~--~P~y~--------------~-------------------~~-~~~---------l~~~f 120 (292)
T 3daq_A 86 SIQASIQAKALGADAIMLI--TPYYN--------------K-------------------TN-QRG---------LVKHF 120 (292)
T ss_dssp HHHHHHHHHHHTCSEEEEE--CCCSS--------------C-------------------CC-HHH---------HHHHH
T ss_pred HHHHHHHHHHcCCCEEEEC--CCCCC--------------C-------------------CC-HHH---------HHHHH
Confidence 8888899999999998765 34320 0 00 111 13466
Q ss_pred HHHHHhcCCCEEEEec-------CCHHHHHHHHHcC-CcEEEEecccccCCCCCcchHHHHHHHHHHccC-CCeEEEecC
Q 021739 158 KWLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKG-RVPVFLDGG 228 (308)
Q Consensus 158 ~~ir~~~~~Pv~vK~~-------~~~e~a~~~~~~G-~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~-~ipvia~GG 228 (308)
+.|.+.+++||++=.. ++++...++.+.. +-+|.-+ . .++..+.++.+..+. ++.|+. |.
T Consensus 121 ~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK~s--s--------gd~~~~~~~~~~~~~~~f~v~~-G~ 189 (292)
T 3daq_A 121 EAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIVALKDA--T--------NDFEYLEEVKKRIDTNSFALYS-GN 189 (292)
T ss_dssp HHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEEEC--C--------CCHHHHHHHHTTSCTTTSEEEE-SC
T ss_pred HHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcCCCEEEEEeC--C--------CCHHHHHHHHHHCCCCCEEEEE-CC
Confidence 7787778999987543 5678888887632 2222211 1 134445555544444 455543 42
Q ss_pred CCCHHHHHHHHHcCCCEEEEchH
Q 021739 229 VRRGTDVFKALALGASGVFVGRP 251 (308)
Q Consensus 229 I~~~~d~~k~l~~GAd~V~ig~~ 251 (308)
...+..++.+|++++.-+..
T Consensus 190 ---d~~~~~~l~~G~~G~is~~~ 209 (292)
T 3daq_A 190 ---DDNVVEYYQRGGQGVISVIA 209 (292)
T ss_dssp ---GGGHHHHHHTTCCEEEESGG
T ss_pred ---HHHHHHHHhcCCCEEEeCHH
Confidence 23467888999999988874
No 439
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=90.15 E-value=0.9 Score=40.51 Aligned_cols=46 Identities=22% Similarity=0.474 Sum_probs=39.4
Q ss_pred ccccCHHHHHHHHHhcCCCEEEEec--CCHHHHHHHHHcCCcEEEEec
Q 021739 149 DRSLNWKDVKWLQTITSLPILVKGV--LTAEDASLAIQYGAAGIIVSN 194 (308)
Q Consensus 149 d~~~~~~~i~~ir~~~~~Pv~vK~~--~~~e~a~~~~~~G~d~i~v~~ 194 (308)
.|.+.++.+++|++.+++|+++-+. .+.++.+++.+.|+.-|.+..
T Consensus 190 ~p~Ld~~~L~~I~~~v~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~T 237 (288)
T 3q94_A 190 EPNLGFAEMEQVRDFTGVPLVLHGGTGIPTADIEKAISLGTSKINVNT 237 (288)
T ss_dssp SCCCCHHHHHHHHHHHCSCEEECCCTTCCHHHHHHHHHTTEEEEEECH
T ss_pred CCccCHHHHHHHHHhcCCCEEEeCCCCCCHHHHHHHHHcCCeEEEECh
Confidence 4667789999999999999999876 567889999999999997743
No 440
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=90.10 E-value=10 Score=34.01 Aligned_cols=181 Identities=12% Similarity=0.089 Sum_probs=104.6
Q ss_pred ceEecccc-CcccCCCHHHHHHHHHHHHcCCceee--c---CCCCCCHHHHhc-------c-CCC-CceEEeeecCCchH
Q 021739 13 PIMIAPTA-FQKMAHPEGECATARAASAAGTIMTL--S---SWATSSVEEVSS-------T-GPG-IRFFQLYVTKHRNV 77 (308)
Q Consensus 13 Pi~iapm~-~~~~~~~~~~~~~a~~a~~~g~~~~~--s---~~~~~~~e~i~~-------~-~~~-~~~~Ql~~~~d~~~ 77 (308)
|-++.||. -.+-.+.+.-..+.+-..+.|+...+ + |..+.+.+|..+ . ... +.+.... ..+.+.
T Consensus 16 ~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 94 (318)
T 3qfe_A 16 CPAVTFFDSKTDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVG-AHSTRQ 94 (318)
T ss_dssp EECCCCEETTTTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECC-CSSHHH
T ss_pred EeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHH
Confidence 56777876 33334555556677777788886443 2 224556665332 1 222 6676664 456777
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHH
Q 021739 78 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 157 (308)
Q Consensus 78 ~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 157 (308)
..++.+.+++.|++++.+- .|..-.+ | ..++- ..+..
T Consensus 95 ai~la~~a~~~Gadavlv~--~P~y~~k----------p----------------------~~~~~---------l~~~f 131 (318)
T 3qfe_A 95 VLEHINDASVAGANYVLVL--PPAYFGK----------A----------------------TTPPV---------IKSFF 131 (318)
T ss_dssp HHHHHHHHHHHTCSEEEEC--CCCC-------------C----------------------CCHHH---------HHHHH
T ss_pred HHHHHHHHHHcCCCEEEEe--CCcccCC----------C----------------------CCHHH---------HHHHH
Confidence 8888899999999998764 3422000 0 00111 13566
Q ss_pred HHHHHhcCCCEEEEec--------CCHHHHHHHHH-c-CCcEEEEecccccCCCCCcchHHHHHHHHHHcc-CCCeEEEe
Q 021739 158 KWLQTITSLPILVKGV--------LTAEDASLAIQ-Y-GAAGIIVSNHGARQLDYVPATVMALEEVVQAAK-GRVPVFLD 226 (308)
Q Consensus 158 ~~ir~~~~~Pv~vK~~--------~~~e~a~~~~~-~-G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~-~~ipvia~ 226 (308)
+.|.+.+++||++=.+ ++++...++.+ . .+-+|.-+. .++..+.++.+.+. .++.|+.
T Consensus 132 ~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~La~~~pnIvgiKdss----------gd~~~~~~~~~~~~~~~f~v~~- 200 (318)
T 3qfe_A 132 DDVSCQSPLPVVIYNFPGVCNGIDLDSDMITTIARKNPNVVGVKLTC----------ASVGKITRLAATLPPAAFSVFG- 200 (318)
T ss_dssp HHHHHHCSSCEEEEECCC----CCCCHHHHHHHHHHCTTEEEEEESS----------CCHHHHHHHHHHSCGGGCEEEE-
T ss_pred HHHHhhCCCCEEEEeCCcccCCCCCCHHHHHHHHhhCCCEEEEEeCC----------CCHHHHHHHHHhcCCCCEEEEE-
Confidence 7787888999887543 45677777776 3 233333211 13444455544442 2344443
Q ss_pred cCCCCHHHHHHHHHcCCCEEEEchH
Q 021739 227 GGVRRGTDVFKALALGASGVFVGRP 251 (308)
Q Consensus 227 GGI~~~~d~~k~l~~GAd~V~ig~~ 251 (308)
| +...+..++.+|++++.-+..
T Consensus 201 G---~d~~~l~~l~~G~~G~is~~a 222 (318)
T 3qfe_A 201 G---QSDFLIGGLSVGSAGCIAAFA 222 (318)
T ss_dssp S---CGGGHHHHHHTTCCEEECGGG
T ss_pred e---cHHHHHHHHHCCCCEEEecHH
Confidence 3 123467888999999987764
No 441
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=90.01 E-value=1.8 Score=40.50 Aligned_cols=144 Identities=13% Similarity=0.035 Sum_probs=88.0
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
..+++.+.+.+++..+.|++.+-+.++.+... ...+ ..+. + .. . ........+.+
T Consensus 151 ~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~--~~~~----~~~~-------~--------~~--~--~~~~~~~~~~~ 205 (421)
T 4hnl_A 151 ADNLDDLYHEIDRFLAAGYRYIRCQLGFYGGN--PSQL----QTPE-------E--------PI--S--GSYFDQTDYME 205 (421)
T ss_dssp ESSHHHHHHHHHHHHHTTCSEEEEEESCCCCC--GGGS----CCCS-------S--------CC--S--SEECCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhhHHHHhhccccccCC--chhc----cccc-------c--------cc--c--cccccchhHHH
Confidence 45677777788888889999998888754320 0000 0000 0 00 0 00000001223
Q ss_pred cCHHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeE
Q 021739 152 LNWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 152 ~~~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipv 223 (308)
...+.++++|+.+ ++.+.+-.. .+.++ ++.+.+.++..|. +. -.+.+++.+.++++.+ ++||
T Consensus 206 ~d~~~v~avR~a~G~~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iE-------eP-~~~~d~~~~~~l~~~~--~ipI 275 (421)
T 4hnl_A 206 TTLKMFAAIKEKYGNQFQMLHDVHERLHPNQAIQFAKAAEPYQLFFLE-------DI-LPPDQSHWLTQLRSQS--ATPI 275 (421)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------CC-SCGGGGGGHHHHHTTC--CCCE
T ss_pred HHHHHHHHHHHHhCCCceEeccccccCCHHHHHHHHHHhhhhhhcccc-------cC-CcccchHHHHHHHhcC--CCCe
Confidence 3467788999886 566666543 45554 4566677877774 10 0122455667776655 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 224 FLDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
.++--+.+..|+.+++..| +|.+++--
T Consensus 276 a~dE~~~~~~~~~~~i~~~a~d~v~~d~ 303 (421)
T 4hnl_A 276 ATGELFNNPMEWQELVKNRQIDFMRAHV 303 (421)
T ss_dssp EECTTCCSGGGTHHHHHTTCCSEECCCG
T ss_pred ecCcceehhHHHHHHHhcCCceEEEeCC
Confidence 9999999999999999988 78888653
No 442
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=89.97 E-value=5.6 Score=37.50 Aligned_cols=120 Identities=8% Similarity=0.078 Sum_probs=82.9
Q ss_pred CchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccC
Q 021739 74 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 153 (308)
Q Consensus 74 d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 153 (308)
+++.+.+.+++..+.|++.+-+.++++ ++..
T Consensus 201 ~~e~~~~~a~~~~~~Gf~~~KlKvG~~-------------------------------------------------~~~d 231 (441)
T 4a35_A 201 SDDTLKQLCAQALKDGWTRFKVKVGAD-------------------------------------------------LQDD 231 (441)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSSC-------------------------------------------------HHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCC-------------------------------------------------HHHH
Confidence 677777778877788999987765421 1112
Q ss_pred HHHHHHHHHhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHcc-CCCeEE
Q 021739 154 WKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAK-GRVPVF 224 (308)
Q Consensus 154 ~~~i~~ir~~~--~~Pv~vK~~--~~~e~----a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~-~~ipvi 224 (308)
.+.++.+|+.+ ++++.+-.. .+.++ ++.+.+.++.+|. +. -.+..+..+.++++.+. ..+||.
T Consensus 232 ~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~L~~~~~~~iE-------eP-~~~~d~~~~~~l~~~l~~~~iPIa 303 (441)
T 4a35_A 232 MRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIE-------EP-TSPDDILGHATISKALVPLGIGIA 303 (441)
T ss_dssp HHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE-------CC-SCTTCHHHHHHHHHHHGGGTCEEE
T ss_pred HHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHhhcccCccEEe-------CC-CCcccHHHHHHHHHhccCCCCCEE
Confidence 45688888875 577777643 45555 4566677877774 10 01234666777776532 279999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 225 LDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 225 a~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
++--+.+..|+.+++..| +|.+++--
T Consensus 304 ~gE~~~~~~~~~~~l~~~a~div~~d~ 330 (441)
T 4a35_A 304 TGEQCHNRVIFKQLLQAKALQFLQIDS 330 (441)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCCT
T ss_pred eCCccccHHHHHHHHHcCCCCEEEECc
Confidence 999999999999999986 78888743
No 443
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=89.96 E-value=7.7 Score=34.16 Aligned_cols=132 Identities=16% Similarity=0.076 Sum_probs=75.6
Q ss_pred ceEEeeecCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHh
Q 021739 65 RFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYV 144 (308)
Q Consensus 65 ~~~Ql~~~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (308)
..+-+. +.+.+.....++.+...|+|.+.+.+|.-.. + .
T Consensus 42 i~v~l~-~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~-------------~---------------------~------ 80 (276)
T 3o1n_A 42 IIVSLM-GKTITDVKSEALAYREADFDILEWRVDHFAN-------------V---------------------T------ 80 (276)
T ss_dssp EEEEEC-CSSHHHHHHHHHHHTTSCCSEEEEEGGGCTT-------------T---------------------T------
T ss_pred EEEEeC-CCCHHHHHHHHHHHhhCCCCEEEEEeccccc-------------c---------------------C------
Confidence 344554 7788877777787777899999998873210 0 0
Q ss_pred hhhcccccCHHHHHHHHHhc-CCCEEEEec---------CCHH----HHHHHHHcC-CcEEEEecccccCCCCCcchHHH
Q 021739 145 ANQIDRSLNWKDVKWLQTIT-SLPILVKGV---------LTAE----DASLAIQYG-AAGIIVSNHGARQLDYVPATVMA 209 (308)
Q Consensus 145 ~~~~d~~~~~~~i~~ir~~~-~~Pv~vK~~---------~~~e----~a~~~~~~G-~d~i~v~~~gg~~~~~~~~~~~~ 209 (308)
+.+...+.++.+|+.. ++|+++=.+ .+.+ ..+.+.+.| +|+|+|--.. ..+.
T Consensus 81 ----~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~ll~~~l~~g~~dyIDvEl~~---------~~~~ 147 (276)
T 3o1n_A 81 ----TAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFT---------GDDE 147 (276)
T ss_dssp ----CHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCCCHHHHHHHHHHHHHHTCCSEEEEEGGG---------CHHH
T ss_pred ----cHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCCCHHHHHHHHHHHHhcCCCCEEEEECcC---------CHHH
Confidence 0112235677888876 789887543 1222 346667788 8999985321 1122
Q ss_pred HHHHHHH-ccCCCeEEEec----CCCCHHHHH----HHHHcCCCEEEEch
Q 021739 210 LEEVVQA-AKGRVPVFLDG----GVRRGTDVF----KALALGASGVFVGR 250 (308)
Q Consensus 210 l~~i~~~-~~~~ipvia~G----GI~~~~d~~----k~l~~GAd~V~ig~ 250 (308)
+.++.+. -+.++.||+|- +--+.+++. ++..+|||.|=+..
T Consensus 148 ~~~l~~~a~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~GaDIvKia~ 197 (276)
T 3o1n_A 148 VKATVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAV 197 (276)
T ss_dssp HHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHhCCCEEEEEeecCCCCcCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 3333221 12356677763 223334443 33446777766654
No 444
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=89.96 E-value=9.7 Score=33.56 Aligned_cols=177 Identities=20% Similarity=0.215 Sum_probs=104.0
Q ss_pred ceEeccccCcccCCCHHHHHHHHHHHHcCCceee--cC---CCCCCHHHHhc-------c-CCC-CceEEeeecCCchHH
Q 021739 13 PIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVSS-------T-GPG-IRFFQLYVTKHRNVD 78 (308)
Q Consensus 13 Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~--s~---~~~~~~e~i~~-------~-~~~-~~~~Ql~~~~d~~~~ 78 (308)
|.++.||. .+-.+.+.-..+.+-..+.|+...+ ++ ..+.+.+|..+ . ... +.+.... ..+.+..
T Consensus 7 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 84 (289)
T 2yxg_A 7 PAIITPFK-NKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAG-SNCTEEA 84 (289)
T ss_dssp EBCCCCEE-TTEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSSHHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHH
Confidence 55677886 5545665566777777788986543 33 23456655332 1 222 5566654 3466777
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHH
Q 021739 79 AQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVK 158 (308)
Q Consensus 79 ~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~ 158 (308)
.++.+.+++.|++++.+. .|... + . .++- ..+..+
T Consensus 85 i~la~~a~~~Gadavlv~--~P~y~--------------~-------------------~-s~~~---------l~~~f~ 119 (289)
T 2yxg_A 85 IELSVFAEDVGADAVLSI--TPYYN--------------K-------------------P-TQEG---------LRKHFG 119 (289)
T ss_dssp HHHHHHHHHHTCSEEEEE--CCCSS--------------C-------------------C-CHHH---------HHHHHH
T ss_pred HHHHHHHHhcCCCEEEEC--CCCCC--------------C-------------------C-CHHH---------HHHHHH
Confidence 788899999999998765 35320 0 0 0111 134567
Q ss_pred HHHHhcCCCEEEEec-------CCHHHHHHHH-Hc-CCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCC
Q 021739 159 WLQTITSLPILVKGV-------LTAEDASLAI-QY-GAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 229 (308)
Q Consensus 159 ~ir~~~~~Pv~vK~~-------~~~e~a~~~~-~~-G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI 229 (308)
+|.+.+++||++=.. ++++...++. +. .+-+|.-+. + +...+.++.+.. ++.| .+|.
T Consensus 120 ~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiK~s~--g--------d~~~~~~~~~~~--~f~v-~~G~- 185 (289)
T 2yxg_A 120 KVAESINLPIVLYNVPSRTAVNLEPKTVKLLAEEYSNISAVKEAN--P--------NLSQVSELIHDA--KITV-LSGN- 185 (289)
T ss_dssp HHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECC--S--------CTHHHHHHHHHT--CSEE-EESC-
T ss_pred HHHHhcCCCEEEEeCccccCcCCCHHHHHHHHHhCCCEEEEEeCC--C--------CHHHHHHHHHhC--CeEE-EECc-
Confidence 788888999987543 5778887777 53 233333211 1 123333444433 4444 3442
Q ss_pred CCHHHHHHHHHcCCCEEEEchHH
Q 021739 230 RRGTDVFKALALGASGVFVGRPV 252 (308)
Q Consensus 230 ~~~~d~~k~l~~GAd~V~ig~~~ 252 (308)
-..+..++.+|++++.-+..-
T Consensus 186 --d~~~~~~l~~G~~G~is~~~n 206 (289)
T 2yxg_A 186 --DELTLPIIALGGKGVISVVAN 206 (289)
T ss_dssp --GGGHHHHHHTTCCEEEESGGG
T ss_pred --HHHHHHHHHCCCCEEEeChhh
Confidence 234677889999999888753
No 445
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=89.93 E-value=1.6 Score=39.09 Aligned_cols=71 Identities=18% Similarity=0.082 Sum_probs=48.7
Q ss_pred HHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHh
Q 021739 177 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 177 e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
+.++.+.++|||.|.+.. +.++.+.+.++.+.+...+|++++-+-....++.+.-++|...|..+...+.+
T Consensus 174 ~Ra~ay~eAGAd~i~~e~--------~~~~~~~~~~i~~~~~~~~P~i~~~~~~~~~~~~eL~~lGv~~v~~~~~~~ra 244 (295)
T 1s2w_A 174 KRAEAYRNAGADAILMHS--------KKADPSDIEAFMKAWNNQGPVVIVPTKYYKTPTDHFRDMGVSMVIWANHNLRA 244 (295)
T ss_dssp HHHHHHHHTTCSEEEECC--------CSSSSHHHHHHHHHHTTCSCEEECCSTTTTSCHHHHHHHTCCEEEECSHHHHH
T ss_pred HHHHHHHHcCCCEEEEcC--------CCCCHHHHHHHHHHcCCCCCEEEeCCCCCCCCHHHHHHcCCcEEEEChHHHHH
Confidence 457888999999998742 12345667777777744599998733111113555557999999999887764
No 446
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=89.81 E-value=0.26 Score=42.00 Aligned_cols=59 Identities=17% Similarity=0.153 Sum_probs=38.2
Q ss_pred HHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHH---H------HHHHHHcCCCEEEE
Q 021739 178 DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGT---D------VFKALALGASGVFV 248 (308)
Q Consensus 178 ~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~---d------~~k~l~~GAd~V~i 248 (308)
.++. .+.|+| ++.+ ...+.++++.+ ..+ +.++||+-.. | ..+ +..|||.+.+
T Consensus 131 ~a~~-~e~G~d-vV~~-------------~~~~~~ir~~~--~~~-~v~pGI~~~~~~~dq~rv~t~~~-i~aGad~iVv 191 (213)
T 1vqt_A 131 IEKL-NKLGCD-FVLP-------------GPWAKALREKI--KGK-ILVPGIRMEVKADDQKDVVTLEE-MKGIANFAVL 191 (213)
T ss_dssp HHHH-HHHTCE-EECC-------------HHHHHHHTTTC--CSC-EEECCBC---------CCBCHHH-HTTTCSEEEE
T ss_pred HHHH-hcCCCE-EEEc-------------HHHHHHHHHHC--CCC-EEECCCCCCCCccchhhcCCHHH-HHCCCCEEEE
Confidence 3556 888999 5431 13444554444 235 8888986432 2 567 8899999999
Q ss_pred chHHHHh
Q 021739 249 GRPVPFS 255 (308)
Q Consensus 249 g~~~l~~ 255 (308)
||+++.+
T Consensus 192 GR~I~~a 198 (213)
T 1vqt_A 192 GREIYLS 198 (213)
T ss_dssp SHHHHTS
T ss_pred ChhhcCC
Confidence 9999874
No 447
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=89.80 E-value=1.6 Score=38.06 Aligned_cols=73 Identities=25% Similarity=0.241 Sum_probs=51.9
Q ss_pred CCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEe-----cCC-CCH-------HHHHHHHH
Q 021739 174 LTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLD-----GGV-RRG-------TDVFKALA 240 (308)
Q Consensus 174 ~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~-----GGI-~~~-------~d~~k~l~ 240 (308)
.+.+++..+.+.|||-|.+-..- ...+--|+...+..+++.+ ++||.+. |++ .|. +|+..+.+
T Consensus 9 ~s~~~a~~A~~~GAdRIELc~~L--~~GGlTPS~g~i~~~~~~~--~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~ 84 (256)
T 1twd_A 9 YSMECALTAQQNGADRVELCAAP--KEGGLTPSLGVLKSVRQRV--TIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRE 84 (256)
T ss_dssp SSHHHHHHHHHTTCSEEEECBCG--GGTCBCCCHHHHHHHHHHC--CSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEcCCc--ccCCCCCCHHHHHHHHHHc--CCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHH
Confidence 68899999999999999985421 1111235677777777766 6888764 444 333 36667778
Q ss_pred cCCCEEEEch
Q 021739 241 LGASGVFVGR 250 (308)
Q Consensus 241 ~GAd~V~ig~ 250 (308)
+|||.|.+|-
T Consensus 85 ~GadGvV~G~ 94 (256)
T 1twd_A 85 LGFPGLVTGV 94 (256)
T ss_dssp TTCSEEEECC
T ss_pred cCCCEEEEee
Confidence 9999999994
No 448
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=89.77 E-value=4.9 Score=35.73 Aligned_cols=93 Identities=20% Similarity=0.123 Sum_probs=59.3
Q ss_pred HHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEeccc-c--cC-CCCCcchHHHH-HHHHHHcc-CCCeEEEec--C
Q 021739 157 VKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHG-A--RQ-LDYVPATVMAL-EEVVQAAK-GRVPVFLDG--G 228 (308)
Q Consensus 157 i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~g-g--~~-~~~~~~~~~~l-~~i~~~~~-~~ipvia~G--G 228 (308)
++++++. +-|+.+-+..+.-.|+.+.++|+|+|.+++.+ + .. .|.++-+++.+ ..++...+ .++||+++. |
T Consensus 7 lr~l~~~-~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~G 85 (290)
T 2hjp_A 7 LRAALDS-GRLFTAMAAHNPLVAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTG 85 (290)
T ss_dssp HHHHHHH-CCCEEEEECSSHHHHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTT
T ss_pred HHHHHhC-CCcEEEecCCCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 4444432 56888888889999999999999999998632 1 11 12233344433 33322222 269999987 4
Q ss_pred CCCHHHHH----HHHHcCCCEEEEch
Q 021739 229 VRRGTDVF----KALALGASGVFVGR 250 (308)
Q Consensus 229 I~~~~d~~----k~l~~GAd~V~ig~ 250 (308)
..++.++. +.+.+||++|.+=-
T Consensus 86 yg~~~~~~~~v~~l~~aGa~gv~iED 111 (290)
T 2hjp_A 86 FGNAVNVHYVVPQYEAAGASAIVMED 111 (290)
T ss_dssp TSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEEcC
Confidence 44666554 45568999998743
No 449
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=89.75 E-value=11 Score=34.08 Aligned_cols=180 Identities=17% Similarity=0.180 Sum_probs=105.3
Q ss_pred CceEeccccCcccCCCHHHHHHHHHHHHcCCceee--cC---CCCCCHHHHhc-------c-CCC-CceEEeeecCCchH
Q 021739 12 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVSS-------T-GPG-IRFFQLYVTKHRNV 77 (308)
Q Consensus 12 ~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~--s~---~~~~~~e~i~~-------~-~~~-~~~~Ql~~~~d~~~ 77 (308)
.|.++.||.-.+-.+.+.-..+.+-..+.|+...+ ++ ..+.+.+|..+ . ... +.+.... ..+.+.
T Consensus 36 ~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~e 114 (343)
T 2v9d_A 36 IPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTG-GTNARE 114 (343)
T ss_dssp CCEECCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-SSCHHH
T ss_pred EEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHH
Confidence 36677888643334555556677777788875433 33 24556655331 1 222 5666654 456677
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHH
Q 021739 78 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 157 (308)
Q Consensus 78 ~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 157 (308)
..++.+.+++.|++++.+. .|... + . .++- ..+..
T Consensus 115 ai~la~~A~~~Gadavlv~--~P~Y~--------------~-------------------~-s~~~---------l~~~f 149 (343)
T 2v9d_A 115 TIELSQHAQQAGADGIVVI--NPYYW--------------K-------------------V-SEAN---------LIRYF 149 (343)
T ss_dssp HHHHHHHHHHHTCSEEEEE--CCSSS--------------C-------------------C-CHHH---------HHHHH
T ss_pred HHHHHHHHHhcCCCEEEEC--CCCCC--------------C-------------------C-CHHH---------HHHHH
Confidence 7788899999999998765 35320 0 0 0111 13566
Q ss_pred HHHHHhcCCCEEEEec-------CCHHHHHHHH-Hc-CCcEEEEecccccCCCCCcchHHHHHHHHHHcc---CCCeEEE
Q 021739 158 KWLQTITSLPILVKGV-------LTAEDASLAI-QY-GAAGIIVSNHGARQLDYVPATVMALEEVVQAAK---GRVPVFL 225 (308)
Q Consensus 158 ~~ir~~~~~Pv~vK~~-------~~~e~a~~~~-~~-G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~---~~ipvia 225 (308)
+.|.+.+++||++=.+ ++++...++. +. .+-+|.-+. .+...+.++.+..+ +++.|+
T Consensus 150 ~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~~pnIvgiKdss----------gd~~~~~~l~~~~~~~~~~f~v~- 218 (343)
T 2v9d_A 150 EQVADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNIIGIKDTI----------DSVAHLRSMIHTVKGAHPHFTVL- 218 (343)
T ss_dssp HHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHHHCTTEEEEEECC----------SCHHHHHHHHHHHHHHCTTCEEE-
T ss_pred HHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHHHhCCCEEEEEeCC----------CCHHHHHHHHHhcCCCCCCEEEE-
Confidence 7788888999987543 5778887776 53 233333211 12333444444333 355554
Q ss_pred ecCCCCHHHHHHHHHcCCCEEEEchH
Q 021739 226 DGGVRRGTDVFKALALGASGVFVGRP 251 (308)
Q Consensus 226 ~GGI~~~~d~~k~l~~GAd~V~ig~~ 251 (308)
+| +...+...+.+|++++.-+..
T Consensus 219 ~G---~D~~~l~~l~~Ga~G~is~~a 241 (343)
T 2v9d_A 219 CG---YDDHLFNTLLLGGDGAISASG 241 (343)
T ss_dssp ES---SGGGHHHHHHTTCCEECCGGG
T ss_pred EC---cHHHHHHHHHCCCCEEEeCHH
Confidence 44 234467888999999987764
No 450
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=89.70 E-value=11 Score=33.61 Aligned_cols=181 Identities=15% Similarity=0.119 Sum_probs=105.1
Q ss_pred CceEeccccCcccCCCHHHHHHHHHHHHcCCceee--cC---CCCCCHHHHhc-------c-CCC-CceEEeeecCCchH
Q 021739 12 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVSS-------T-GPG-IRFFQLYVTKHRNV 77 (308)
Q Consensus 12 ~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~--s~---~~~~~~e~i~~-------~-~~~-~~~~Ql~~~~d~~~ 77 (308)
.|.++.||.-.+-.+.++-..+.+-..+.|+...+ ++ ..+.+.+|..+ . ... +.+.... ..+.+.
T Consensus 16 ~~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg-~~~t~~ 94 (303)
T 2wkj_A 16 MAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVG-CVSTAE 94 (303)
T ss_dssp EEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSSHHH
T ss_pred EEeeEcCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHH
Confidence 35667888544334555556677777788886543 32 23556655331 1 222 5666654 346677
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHH
Q 021739 78 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 157 (308)
Q Consensus 78 ~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 157 (308)
..++.+.+++.|++++.+. .|... + . .++- ..+..
T Consensus 95 ai~la~~A~~~Gadavlv~--~P~y~--------------~-------------------~-s~~~---------l~~~f 129 (303)
T 2wkj_A 95 SQQLAASAKRYGFDAVSAV--TPFYY--------------P-------------------F-SFEE---------HCDHY 129 (303)
T ss_dssp HHHHHHHHHHHTCSEEEEE--CCCSS--------------C-------------------C-CHHH---------HHHHH
T ss_pred HHHHHHHHHhCCCCEEEec--CCCCC--------------C-------------------C-CHHH---------HHHHH
Confidence 7788899999999998765 35320 0 0 0111 13456
Q ss_pred HHHHHhcC-CCEEEEec-------CCHHHHHHHHHcC-CcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecC
Q 021739 158 KWLQTITS-LPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGG 228 (308)
Q Consensus 158 ~~ir~~~~-~Pv~vK~~-------~~~e~a~~~~~~G-~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GG 228 (308)
+.|.+.++ +||++=.+ ++++...++.+.. +-+|.-+. .+...+.++.+. .+++.|+. |.
T Consensus 130 ~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiK~s~----------gd~~~~~~~~~~-~~~f~v~~-G~ 197 (303)
T 2wkj_A 130 RAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALXQTS----------GDLYQMEQIRRE-HPDLVLYN-GY 197 (303)
T ss_dssp HHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHHHTSTTEEEEEECC----------CCHHHHHHHHHH-CTTCEEEE-CC
T ss_pred HHHHHhCCCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEEeCCC----------CCHHHHHHHHHh-CCCeEEEe-Cc
Confidence 77777778 99987542 5778877776531 22332211 123344444443 23455543 32
Q ss_pred CCCHHHHHHHHHcCCCEEEEchHHH
Q 021739 229 VRRGTDVFKALALGASGVFVGRPVP 253 (308)
Q Consensus 229 I~~~~d~~k~l~~GAd~V~ig~~~l 253 (308)
...+..++.+|++++.-+..-+
T Consensus 198 ---d~~~~~~l~~G~~G~is~~an~ 219 (303)
T 2wkj_A 198 ---DNIFASGLLAGADGGIGSTYNI 219 (303)
T ss_dssp ---GGGHHHHHHHTCCEEEETTHHH
T ss_pred ---HHHHHHHHHCCCCEEEeCHHHh
Confidence 2347788889999999887543
No 451
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=89.65 E-value=1.7 Score=40.02 Aligned_cols=83 Identities=13% Similarity=0.027 Sum_probs=54.5
Q ss_pred cCCCEEEEec--CCHHHHHHH-HHcCCcEEEEeccccc---C--CCCCcchH-HHHHHHHHHccCCCeEEEecCC---CC
Q 021739 164 TSLPILVKGV--LTAEDASLA-IQYGAAGIIVSNHGAR---Q--LDYVPATV-MALEEVVQAAKGRVPVFLDGGV---RR 231 (308)
Q Consensus 164 ~~~Pv~vK~~--~~~e~a~~~-~~~G~d~i~v~~~gg~---~--~~~~~~~~-~~l~~i~~~~~~~ipvia~GGI---~~ 231 (308)
.+.|++.-+. .+.+++.++ ...|+|++.+...... + .+.....+ +.+.++++.+ ++||++-+ + .+
T Consensus 143 P~~~~ianig~~~~~e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~--~~PVivK~-vg~g~s 219 (365)
T 3sr7_A 143 PHLLLATNIGLDKPYQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKL--QLPFILKE-VGFGMD 219 (365)
T ss_dssp --CCEEEEEETTSCHHHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHC--CSCEEEEE-CSSCCC
T ss_pred CCCcEEEEeCCCCCHHHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhh--CCCEEEEE-CCCCCC
Confidence 4677764433 456665554 4789999998754211 1 11111123 5677777765 79999984 6 78
Q ss_pred HHHHHHHHHcCCCEEEEc
Q 021739 232 GTDVFKALALGASGVFVG 249 (308)
Q Consensus 232 ~~d~~k~l~~GAd~V~ig 249 (308)
++++.++..+|||++.++
T Consensus 220 ~e~A~~l~~aGad~I~V~ 237 (365)
T 3sr7_A 220 VKTIQTAIDLGVKTVDIS 237 (365)
T ss_dssp HHHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHHcCCCEEEEe
Confidence 999999999999999884
No 452
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=89.60 E-value=1.7 Score=38.54 Aligned_cols=90 Identities=17% Similarity=0.162 Sum_probs=48.0
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCcc-hHHHHHHHHHHccCCCeEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVPA-TVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 253 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~~-~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k----~l~~GAd~V~ig~~~l 253 (308)
++.+.+.|+|+|.+.++.|....-... ..+.+..+.+... . -+...|+. +..++.+ +-.+|||++++-.|++
T Consensus 26 v~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~-g-ViaGvg~~-~t~~ai~la~~A~~~Gadavlv~~P~y 102 (288)
T 2nuw_A 26 AKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTH-K-LIFQVGSL-NLNDVMELVKFSNEMDILGVSSHSPYY 102 (288)
T ss_dssp HHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCS-C-EEEECCCS-CHHHHHHHHHHHHTSCCSEEEECCCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-C-eEEeeCCC-CHHHHHHHHHHHHhcCCCEEEEcCCcC
Confidence 456778999999987765532111111 1122222233332 2 33444444 4444443 2237999999999987
Q ss_pred HhcccCCHHHHHHHHHHHHH
Q 021739 254 FSLAVDGEAGVRKVLQMLRD 273 (308)
Q Consensus 254 ~~~~~~G~~~v~~~i~~l~~ 273 (308)
+. .-.++++.++++.+.+
T Consensus 103 ~~--~~s~~~l~~~f~~va~ 120 (288)
T 2nuw_A 103 FP--RLPEKFLAKYYEEIAR 120 (288)
T ss_dssp SC--SCCHHHHHHHHHHHHH
T ss_pred CC--CCCHHHHHHHHHHHHH
Confidence 64 0245555555554433
No 453
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=89.31 E-value=2.3 Score=36.43 Aligned_cols=42 Identities=26% Similarity=0.283 Sum_probs=35.8
Q ss_pred cCHHHHHHHHHhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEe
Q 021739 152 LNWKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVS 193 (308)
Q Consensus 152 ~~~~~i~~ir~~~-~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~ 193 (308)
..++.|+++|+.. +++|.+=+..+.+.+..+.++|||.+++.
T Consensus 159 ~~l~ki~~lr~~~~~~~I~VdGGI~~~ti~~~~~aGAd~~V~G 201 (227)
T 1tqx_A 159 DMMGKVSFLRKKYKNLNIQVDGGLNIETTEISASHGANIIVAG 201 (227)
T ss_dssp GGHHHHHHHHHHCTTCEEEEESSCCHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHHHHHHhccCCeEEEECCCCHHHHHHHHHcCCCEEEEe
Confidence 3577888888876 78888888889999999999999999874
No 454
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=89.26 E-value=1.2 Score=39.66 Aligned_cols=46 Identities=13% Similarity=0.387 Sum_probs=39.4
Q ss_pred ccccCHHHHHHHHHhcCCCEEEEec--CCHHHHHHHHHcCCcEEEEec
Q 021739 149 DRSLNWKDVKWLQTITSLPILVKGV--LTAEDASLAIQYGAAGIIVSN 194 (308)
Q Consensus 149 d~~~~~~~i~~ir~~~~~Pv~vK~~--~~~e~a~~~~~~G~d~i~v~~ 194 (308)
.|.+.++.+++|++.+++|+++-+. .+.++.+++.+.|+--|.+..
T Consensus 186 ~p~Ld~~~L~~I~~~~~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~T 233 (286)
T 1gvf_A 186 TPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVAT 233 (286)
T ss_dssp CCCCCHHHHHHHHHHCCSCEEECCCTTCCHHHHHHHHHTTEEEEEECH
T ss_pred CCccCHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHCCCeEEEECh
Confidence 4667789999999999999999886 567889999999999997743
No 455
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=89.25 E-value=0.71 Score=43.08 Aligned_cols=89 Identities=11% Similarity=0.013 Sum_probs=64.8
Q ss_pred cCHHHHHHHHHhc--CCCEEEEec--CCHHHH----HHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeE
Q 021739 152 LNWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 152 ~~~~~i~~ir~~~--~~Pv~vK~~--~~~e~a----~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipv 223 (308)
...+.++++|+.+ +++|.+-.. .+.+++ +.+.+.|+++|.--. .+.++..+.++++.+ ++||
T Consensus 195 ~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~--------~~~~~~~~~~l~~~~--~iPI 264 (400)
T 4dxk_A 195 SALEPFEKIRKAVGDKMDIMVEFHSMWQLLPAMQIAKALTPYQTFWHEDPI--------KMDSLSSLTRYAAVS--PAPI 264 (400)
T ss_dssp HHHHHHHHHHHHHGGGSEEEEECTTCBCHHHHHHHHHHTGGGCCSEEECCB--------CTTSGGGHHHHHHHC--SSCE
T ss_pred HHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHhhcCCCEEEcCC--------CcccHHHHHHHHHhC--CCCE
Confidence 3467899999986 578888643 455554 556678888886110 112345566676665 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEch
Q 021739 224 FLDGGVRRGTDVFKALALG-ASGVFVGR 250 (308)
Q Consensus 224 ia~GGI~~~~d~~k~l~~G-Ad~V~ig~ 250 (308)
+++..+.+..|+.++++.| +|.|++--
T Consensus 265 a~dE~~~~~~~~~~~l~~~a~d~v~~d~ 292 (400)
T 4dxk_A 265 SASETLGSRWAFRDLLETGAAGVVMLDI 292 (400)
T ss_dssp EECTTCCHHHHHHHHHHTTCCCEEEECT
T ss_pred EecCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 9999999999999999988 79999853
No 456
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=89.20 E-value=5.2 Score=35.86 Aligned_cols=95 Identities=20% Similarity=0.247 Sum_probs=61.4
Q ss_pred HHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEeccc------ccCCCCCcchHHHH-HHHHHHcc--C-CCeEE
Q 021739 155 KDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHG------ARQLDYVPATVMAL-EEVVQAAK--G-RVPVF 224 (308)
Q Consensus 155 ~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~g------g~~~~~~~~~~~~l-~~i~~~~~--~-~ipvi 224 (308)
+.++++.+..+.|+.+-+..+.-.|+.+.++|+|+|.+++.+ |. .|.++.+++.+ ..+....+ . ++||+
T Consensus 14 ~~lr~ll~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~s~~G~-pD~~~vt~~em~~~~~~i~r~~~~~~Pvi 92 (307)
T 3lye_A 14 KKLRHLLENTDELIVCPGVYDGLSARTAMELGFKSLYMTGAGTTASRLGQ-PDLAIAQLHDMRDNADMIANLDPFGPPLI 92 (307)
T ss_dssp HHHHHHHHHCCCCEEEEEECSHHHHHHHHHTTCSCEEECHHHHHHHHHCC-CSSSCSCHHHHHHHHHHHHTSSTTSCCEE
T ss_pred HHHHHHHhCCCCeEEEecCcCHHHHHHHHHcCCCEEEeccHHHHHHhcCC-CCCCCCCHHHHHHHHHhhhccCCCCCcEE
Confidence 456666555456787778889999999999999999997532 21 13344444433 33322222 2 48999
Q ss_pred Eec--CCCCHHHHH----HHHHcCCCEEEEch
Q 021739 225 LDG--GVRRGTDVF----KALALGASGVFVGR 250 (308)
Q Consensus 225 a~G--GI~~~~d~~----k~l~~GAd~V~ig~ 250 (308)
++. |..++.++. ++...||++|.|=-
T Consensus 93 aD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED 124 (307)
T 3lye_A 93 ADMDTGYGGPIMVARTVEHYIRSGVAGAHLED 124 (307)
T ss_dssp EECTTCSSSHHHHHHHHHHHHHTTCCEEEECC
T ss_pred EECCCCCCCHHHHHHHHHHHHHcCCeEEEEcC
Confidence 987 444665544 44558999998754
No 457
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=88.94 E-value=12 Score=33.24 Aligned_cols=178 Identities=14% Similarity=0.132 Sum_probs=103.7
Q ss_pred ceEeccccCcccCCCHHHHHHHHHHHHcCCceee--cC---CCCCCHHHHhc-------c-CCC-CceEEeeecCCchHH
Q 021739 13 PIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVSS-------T-GPG-IRFFQLYVTKHRNVD 78 (308)
Q Consensus 13 Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~--s~---~~~~~~e~i~~-------~-~~~-~~~~Ql~~~~d~~~~ 78 (308)
|.++.||.-.+-.+.++-..+.+-..+.|+...+ ++ ..+.+.+|..+ . ... +.+.... ..+.+..
T Consensus 22 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~st~~a 100 (304)
T 3cpr_A 22 VAMVTPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVG-TNNTRTS 100 (304)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHHH
T ss_pred EeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCC-CCCHHHH
Confidence 5667787543334555556677777788876543 32 24556655332 1 222 5666654 4466777
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHH
Q 021739 79 AQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVK 158 (308)
Q Consensus 79 ~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~ 158 (308)
.++.+.+++.|++++.+. .|... + .. ++- ..+..+
T Consensus 101 i~la~~A~~~Gadavlv~--~P~y~--------------~-------------------~~-~~~---------l~~~f~ 135 (304)
T 3cpr_A 101 VELAEAAASAGADGLLVV--TPYYS--------------K-------------------PS-QEG---------LLAHFG 135 (304)
T ss_dssp HHHHHHHHHTTCSEEEEE--CCCSS--------------C-------------------CC-HHH---------HHHHHH
T ss_pred HHHHHHHHhcCCCEEEEC--CCCCC--------------C-------------------CC-HHH---------HHHHHH
Confidence 888899999999998765 35320 0 00 111 134567
Q ss_pred HHHHhcCCCEEEEec-------CCHHHHHHHHHcC-CcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCC
Q 021739 159 WLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVR 230 (308)
Q Consensus 159 ~ir~~~~~Pv~vK~~-------~~~e~a~~~~~~G-~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~ 230 (308)
.|.+.+++||++=.+ ++++...++.+.. +-+|.-+. .+...+.++.+.. ++.|+ +|.
T Consensus 136 ~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKdss----------gd~~~~~~~~~~~--~f~v~-~G~-- 200 (304)
T 3cpr_A 136 AIAAATEVPICLYDIPGRSGIPIESDTMRRLSELPTILAVXDAK----------GDLVAATSLIKET--GLAWY-SGD-- 200 (304)
T ss_dssp HHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTTSTTEEEEEECS----------CCHHHHHHHHHHH--CCEEE-ECS--
T ss_pred HHHHhcCCCEEEEeCccccCcCCCHHHHHHHHcCCCEEEEecCC----------CCHHHHHHHHHhc--CEEEE-ECc--
Confidence 788888999987543 5678877776532 22222111 1233444444333 44443 342
Q ss_pred CHHHHHHHHHcCCCEEEEchHH
Q 021739 231 RGTDVFKALALGASGVFVGRPV 252 (308)
Q Consensus 231 ~~~d~~k~l~~GAd~V~ig~~~ 252 (308)
...+..++.+|++++.-+..-
T Consensus 201 -d~~~l~~l~~G~~G~is~~an 221 (304)
T 3cpr_A 201 -DPLNLVWLALGGSGFISVIGH 221 (304)
T ss_dssp -GGGHHHHHHTTCCEEEESGGG
T ss_pred -HHHHHHHHHCCCCEEEecHHH
Confidence 234677889999999888754
No 458
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=88.89 E-value=4.1 Score=36.17 Aligned_cols=93 Identities=18% Similarity=0.238 Sum_probs=60.2
Q ss_pred HHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEeccc-c---cC-CCCCcchHHHH-HHHHHHcc-CCCeEEEec--
Q 021739 157 VKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHG-A---RQ-LDYVPATVMAL-EEVVQAAK-GRVPVFLDG-- 227 (308)
Q Consensus 157 i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~g-g---~~-~~~~~~~~~~l-~~i~~~~~-~~ipvia~G-- 227 (308)
++++++ .+-|+.+-+..+.-.|+.+.++|+|+|.+++.+ + .. .|.++-+++.+ ..++...+ .++||+++.
T Consensus 13 lr~l~~-~~~~i~~~~a~D~~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~ 91 (287)
T 3b8i_A 13 FRALLD-SSRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADH 91 (287)
T ss_dssp HHHHHH-SSCCEECEECCSHHHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEECTT
T ss_pred HHHHHh-CCCcEEEecCCCHHHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 444443 256888777888999999999999999998752 1 01 12344444443 33332222 268999987
Q ss_pred CCCCHHHHH----HHHHcCCCEEEEch
Q 021739 228 GVRRGTDVF----KALALGASGVFVGR 250 (308)
Q Consensus 228 GI~~~~d~~----k~l~~GAd~V~ig~ 250 (308)
|..++.++. +.+.+||++|.+=-
T Consensus 92 Gyg~~~~~~~~v~~l~~aGa~gv~iED 118 (287)
T 3b8i_A 92 GYGNALNVMRTVVELERAGIAALTIED 118 (287)
T ss_dssp CSSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHhCCeEEEEcC
Confidence 455766654 45568999998844
No 459
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=88.65 E-value=4.4 Score=34.67 Aligned_cols=77 Identities=18% Similarity=0.163 Sum_probs=51.8
Q ss_pred CEEEEec--CCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHH-cCC
Q 021739 167 PILVKGV--LTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALA-LGA 243 (308)
Q Consensus 167 Pv~vK~~--~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~-~GA 243 (308)
+..||++ .++|+++ +.++|+|++-+.-.... ...-+.+...++.+.. ..|+...|=..+.+++.+.+. .+.
T Consensus 20 ~M~VKICGit~~ed~~-a~~~gaD~iGfIf~~~S---pR~V~~~~A~~i~~~~--~~~~~~v~v~v~~~ei~~~i~~~~l 93 (228)
T 4aaj_A 20 HMFVKICGIKSLEELE-IVEKHADATGVVVNSNS---KRRIPLEKAREIIENS--AIPVFLVSTMVGFSEWAMAIERTGA 93 (228)
T ss_dssp CCEEEECCCCSHHHHH-HHHTTCSEEEEECSSSS---TTBCCHHHHHHHHHHC--SSCEEEEECCCCHHHHHHHHHHHTC
T ss_pred ceEEEECCCCcHHHHH-HHHcCCCEEEEEecCCC---CCCCCHHHHHHHHHhh--CCCCEEEeccCchHHHHHHHHhccc
Confidence 4678987 5688886 67899999965432221 1112344445555544 567777777778888887776 789
Q ss_pred CEEEEc
Q 021739 244 SGVFVG 249 (308)
Q Consensus 244 d~V~ig 249 (308)
|.|++=
T Consensus 94 d~vQLH 99 (228)
T 4aaj_A 94 QYIQVH 99 (228)
T ss_dssp SEEEEC
T ss_pred hheecc
Confidence 999984
No 460
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=88.61 E-value=5.7 Score=35.46 Aligned_cols=91 Identities=20% Similarity=0.270 Sum_probs=59.8
Q ss_pred HHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEeccc------ccCCCCCcchHHHH----HHHHHHccCCCeEEE
Q 021739 156 DVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHG------ARQLDYVPATVMAL----EEVVQAAKGRVPVFL 225 (308)
Q Consensus 156 ~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~g------g~~~~~~~~~~~~l----~~i~~~~~~~ipvia 225 (308)
.++++++. +-|+.+-+..+.-.|+.+.++|+|+|.+++.+ |. .|.++.+++.+ ..+.+.. ++||++
T Consensus 13 ~lr~l~~~-~~~i~~~~a~D~~sA~l~e~aGf~ai~vs~~s~a~~~~G~-pD~~~vt~~em~~~~~~I~r~~--~~Pvia 88 (298)
T 3eoo_A 13 KFRAAVAA-EQPLQVVGAITAYAAKMAEAVGFKAVYLSGGGVAANSLGI-PDLGISTMDDVLVDANRITNAT--NLPLLV 88 (298)
T ss_dssp HHHHHHHH-SSSEEEEECSSHHHHHHHHHHTCSCEEECHHHHHHHTTCC-CSSSCCCHHHHHHHHHHHHHHC--CSCEEE
T ss_pred HHHHHHhC-CCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHHHHhcCC-CCCCCCCHHHHHHHHHHHHhhc--CCeEEE
Confidence 45555443 56888888888999999999999999998632 11 12333344332 3344443 789999
Q ss_pred ec--CCCCHHHHH----HHHHcCCCEEEEch
Q 021739 226 DG--GVRRGTDVF----KALALGASGVFVGR 250 (308)
Q Consensus 226 ~G--GI~~~~d~~----k~l~~GAd~V~ig~ 250 (308)
+. |..++.++. +....||++|.+--
T Consensus 89 D~d~Gyg~~~~v~~~v~~l~~aGaagv~iED 119 (298)
T 3eoo_A 89 DIDTGWGGAFNIARTIRSFIKAGVGAVHLED 119 (298)
T ss_dssp ECTTCSSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred ECCCCCCCHHHHHHHHHHHHHhCCeEEEECC
Confidence 87 444665554 34458999998754
No 461
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=88.58 E-value=1.1 Score=40.53 Aligned_cols=37 Identities=16% Similarity=0.119 Sum_probs=29.3
Q ss_pred HHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEE
Q 021739 154 WKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGII 191 (308)
Q Consensus 154 ~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~ 191 (308)
...|+.+++..++||++ ....++.++.+.++|++.|.
T Consensus 74 ~pvI~~l~~~~~vpiSI-DT~~~~Va~aAl~aGa~iIN 110 (314)
T 2vef_A 74 VPVIKAIRKESDVLISI-DTWKSQVAEAALAAGADLVN 110 (314)
T ss_dssp HHHHHHHHHHCCCEEEE-ECSCHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhhCCceEEE-eCCCHHHHHHHHHcCCCEEE
Confidence 45677888777889887 55778889999999998774
No 462
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=88.42 E-value=13 Score=33.11 Aligned_cols=181 Identities=18% Similarity=0.160 Sum_probs=109.4
Q ss_pred CceEeccccCcccCCCHHHHHHHHHHHHcCCceee--cC---CCCCCHHHHhc-------cCCC--CceEEeeecCCchH
Q 021739 12 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVSS-------TGPG--IRFFQLYVTKHRNV 77 (308)
Q Consensus 12 ~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~--s~---~~~~~~e~i~~-------~~~~--~~~~Ql~~~~d~~~ 77 (308)
.|.++.||.-.+-.+.++-..+.+-..+.|+...+ ++ ..+.+.+|..+ ...+ +.+.... ..+.+.
T Consensus 12 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg-~~~t~~ 90 (311)
T 3h5d_A 12 ITAFITPFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVG-TNDTRD 90 (311)
T ss_dssp EEECCCCBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECC-CSSHHH
T ss_pred EEeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHH
Confidence 36678888644445666667788888888986433 22 23556655332 2222 6676654 446677
Q ss_pred HHHHHHHHHHcCC-cEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHH
Q 021739 78 DAQLVKRAERAGF-KAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKD 156 (308)
Q Consensus 78 ~~~~~~~~~~~g~-~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 156 (308)
..++.+.+++.|+ +++.+. .|... + .. ++- ..+.
T Consensus 91 ai~la~~A~~~Ga~davlv~--~P~y~--------------~-------------------~s-~~~---------l~~~ 125 (311)
T 3h5d_A 91 SIEFVKEVAEFGGFAAGLAI--VPYYN--------------K-------------------PS-QEG---------MYQH 125 (311)
T ss_dssp HHHHHHHHHHSCCCSEEEEE--CCCSS--------------C-------------------CC-HHH---------HHHH
T ss_pred HHHHHHHHHhcCCCcEEEEc--CCCCC--------------C-------------------CC-HHH---------HHHH
Confidence 7888899999997 998665 34320 0 00 111 1356
Q ss_pred HHHHHHhcCCCEEEEec-------CCHHHHHHHHHcC-CcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecC
Q 021739 157 VKWLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGG 228 (308)
Q Consensus 157 i~~ir~~~~~Pv~vK~~-------~~~e~a~~~~~~G-~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GG 228 (308)
.+.|.+.+++||++=.. ++++...++.+.. +-+|.- .. +...+.++.+...+++.|+. |.
T Consensus 126 f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKd---------ss--d~~~~~~~~~~~~~~f~v~~-G~ 193 (311)
T 3h5d_A 126 FKAIADASDLPIIIYNIPGRVVVELTPETMLRLADHPNIIGVKE---------CT--SLANMAYLIEHKPEEFLIYT-GE 193 (311)
T ss_dssp HHHHHHSCSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEEEEE---------CS--CHHHHHHHHHHCCSSCEEEE-CC
T ss_pred HHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcCCCEEEEEe---------CC--CHHHHHHHHHHcCCCEEEEE-Cc
Confidence 78888888999987653 5678888887642 222221 11 34455555555544555543 42
Q ss_pred CCCHHHHHHHHHcCCCEEEEchHHH
Q 021739 229 VRRGTDVFKALALGASGVFVGRPVP 253 (308)
Q Consensus 229 I~~~~d~~k~l~~GAd~V~ig~~~l 253 (308)
...+..++.+|++++.-+..-+
T Consensus 194 ---d~~~l~~l~~Ga~G~is~~an~ 215 (311)
T 3h5d_A 194 ---DGDAFHAMNLGADGVISVASHT 215 (311)
T ss_dssp ---GGGHHHHHHHTCCEEEESTHHH
T ss_pred ---HHHHHHHHHcCCCEEEechhhh
Confidence 2346778899999998887543
No 463
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=88.31 E-value=0.95 Score=38.86 Aligned_cols=41 Identities=29% Similarity=0.368 Sum_probs=34.8
Q ss_pred CHHHHHHHHHhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEe
Q 021739 153 NWKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVS 193 (308)
Q Consensus 153 ~~~~i~~ir~~~-~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~ 193 (308)
.++.++++|+.. +.|+.+-+..+++.+..+.++|||.+++.
T Consensus 156 ~l~ki~~lr~~~~~~~I~VdGGI~~~t~~~~~~aGAd~~VvG 197 (228)
T 3ovp_A 156 MMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSG 197 (228)
T ss_dssp GHHHHHHHHHHCTTCEEEEESSCSTTTHHHHHHHTCCEEEES
T ss_pred HHHHHHHHHHhcCCCCEEEeCCcCHHHHHHHHHcCCCEEEEe
Confidence 467788898876 68888888888999999999999999874
No 464
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=88.24 E-value=0.9 Score=40.41 Aligned_cols=37 Identities=19% Similarity=-0.025 Sum_probs=29.0
Q ss_pred HHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEE
Q 021739 154 WKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGII 191 (308)
Q Consensus 154 ~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~ 191 (308)
...++.+++.+++||++ ....++.++.+.++|++.|.
T Consensus 79 ~pvi~~l~~~~~~piSI-DT~~~~va~aAl~aGa~iIN 115 (282)
T 1aj0_A 79 IPVVEAIAQRFEVWISV-DTSKPEVIRESAKVGAHIIN 115 (282)
T ss_dssp HHHHHHHHHHCCCEEEE-ECCCHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhhcCCeEEE-eCCCHHHHHHHHHcCCCEEE
Confidence 35677777777889887 55778889999999998774
No 465
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=88.21 E-value=3.1 Score=36.41 Aligned_cols=192 Identities=17% Similarity=0.204 Sum_probs=102.1
Q ss_pred ceEeccccCcccCCCHHHHHHHHHHHHcCCceeecCCCCCCHHHHhccCCCCceEEeeecCCchHHHHHHHHHHHcCCcE
Q 021739 13 PIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKA 92 (308)
Q Consensus 13 Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~s~~~~~~~e~i~~~~~~~~~~Ql~~~~d~~~~~~~~~~~~~~g~~~ 92 (308)
|++||-+ ....+++.-..+++.+++.|+.++--..- .+ + .. +..+| +...+....+.+.+++.|...
T Consensus 24 ~~vIAgp--c~~~~~e~a~~~a~~l~~~Ga~~vk~~~f-kp-r----ts--~~~~~---g~~~egl~~l~~~~~~~Gl~~ 90 (262)
T 1zco_A 24 FTIIAGP--CSIESREQIMKVAEFLAEVGIKVLRGGAF-KP-R----TS--PYSFQ---GYGEKALRWMREAADEYGLVT 90 (262)
T ss_dssp CEEEEEC--SBCCCHHHHHHHHHHHHHTTCCEEECBSS-CC-C----SS--TTSCC---CCTHHHHHHHHHHHHHHTCEE
T ss_pred cEEEEeC--CCCCCHHHHHHHHHHHHHcCCCEEEEEec-cc-C----CC--ccccc---CccHHHHHHHHHHHHHcCCcE
Confidence 7777755 32344555578999999999876543211 11 0 01 11111 222566666666677888775
Q ss_pred EEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhcCCCEEEEe
Q 021739 93 IALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKG 172 (308)
Q Consensus 93 i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~~~Pv~vK~ 172 (308)
+. ++-.|.. ..-+. .+ . +.++.. + .. + .....++++.+ .++||++|.
T Consensus 91 ~t-e~~d~~~---~~~l~-~~-v--------------d~~kIg--a--~~-~-------~n~~ll~~~a~-~~kPV~lk~ 137 (262)
T 1zco_A 91 VT-EVMDTRH---VELVA-KY-S--------------DILQIG--A--RN-S-------QNFELLKEVGK-VENPVLLKR 137 (262)
T ss_dssp EE-ECCCGGG---HHHHH-HH-C--------------SEEEEC--G--GG-T-------TCHHHHHHHTT-SSSCEEEEC
T ss_pred EE-eeCCHHh---HHHHH-hh-C--------------CEEEEC--c--cc-c-------cCHHHHHHHHh-cCCcEEEec
Confidence 42 3221211 11110 00 0 001100 0 00 0 12355777765 799999997
Q ss_pred cC--CHHHH----HHHHHcCCcEEEEecccccCC--C-CCcchHHHHHHHHHHccCCCeEEEecCCCCHH-----H-HHH
Q 021739 173 VL--TAEDA----SLAIQYGAAGIIVSNHGARQL--D-YVPATVMALEEVVQAAKGRVPVFLDGGVRRGT-----D-VFK 237 (308)
Q Consensus 173 ~~--~~e~a----~~~~~~G~d~i~v~~~gg~~~--~-~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~-----d-~~k 237 (308)
.. +.+++ ..+...|-+-+.+--+|++.. + ........+..+++.. .+|||++..=.++. . +..
T Consensus 138 G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~--~~pVi~d~sH~~g~~~~v~~~~~a 215 (262)
T 1zco_A 138 GMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELS--HLPIIVDPSHPAGRRSLVIPLAKA 215 (262)
T ss_dssp CTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHB--SSCEEECSSTTTCSGGGHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhh--CCCEEEEcCCCCCccchHHHHHHH
Confidence 63 67664 445567876666644443321 1 1122345566666554 58998876554443 4 334
Q ss_pred HHHcCCCEEEEchHH
Q 021739 238 ALALGASGVFVGRPV 252 (308)
Q Consensus 238 ~l~~GAd~V~ig~~~ 252 (308)
+.++||++++|-+=+
T Consensus 216 Ava~Ga~Gl~iE~H~ 230 (262)
T 1zco_A 216 AYAIGADGIMVEVHP 230 (262)
T ss_dssp HHHTTCSEEEEEBCS
T ss_pred HHHcCCCEEEEEecC
Confidence 667999999998854
No 466
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=88.02 E-value=6.2 Score=36.04 Aligned_cols=125 Identities=14% Similarity=0.190 Sum_probs=83.3
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccccc
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 152 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 152 (308)
.|.+...+++++++++|++++-...-.|-.. -++ ++ +.+ ..
T Consensus 117 es~e~a~~~a~~~k~aGa~~vr~q~fKprTs--------~~~---------f~-----------glg-----------~e 157 (350)
T 1vr6_A 117 EGREMLMETAHFLSELGVKVLRGGAYKPRTS--------PYS---------FQ-----------GLG-----------EK 157 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECBSCCCCCS--------TTS---------CC-----------CCT-----------HH
T ss_pred CCHHHHHHHHHHHHHcCCCeeeeeEEeCCCC--------hHh---------hc-----------CCC-----------HH
Confidence 3788899999999999999865443322110 000 00 010 11
Q ss_pred CHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCC-C
Q 021739 153 NWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVR-R 231 (308)
Q Consensus 153 ~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~-~ 231 (308)
.++.++++++..++|++. ...+++.+..+.+. +|.+.+....- ..+..+.++.+ .+.||+.+-|.. |
T Consensus 158 gl~~l~~~~~e~Gl~~~t-e~~d~~~~~~l~~~-vd~lkIgAr~~-------~n~~LL~~va~---~~kPVilk~G~~~t 225 (350)
T 1vr6_A 158 GLEYLREAADKYGMYVVT-EALGEDDLPKVAEY-ADIIQIGARNA-------QNFRLLSKAGS---YNKPVLLKRGFMNT 225 (350)
T ss_dssp HHHHHHHHHHHHTCEEEE-ECSSGGGHHHHHHH-CSEEEECGGGT-------TCHHHHHHHHT---TCSCEEEECCTTCC
T ss_pred HHHHHHHHHHHcCCcEEE-EeCCHHHHHHHHHh-CCEEEECcccc-------cCHHHHHHHHc---cCCcEEEcCCCCCC
Confidence 256778888888999885 56788888889898 99999865321 23455666652 378999999997 8
Q ss_pred HHHHHHHHH----cCCCEEEE
Q 021739 232 GTDVFKALA----LGASGVFV 248 (308)
Q Consensus 232 ~~d~~k~l~----~GAd~V~i 248 (308)
.+|+..+++ .|..-+.+
T Consensus 226 l~ei~~Ave~i~~~GN~~viL 246 (350)
T 1vr6_A 226 IEEFLLSAEYIANSGNTKIIL 246 (350)
T ss_dssp HHHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHHHHCCCCeEEE
Confidence 888886665 47644444
No 467
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=87.95 E-value=13 Score=32.61 Aligned_cols=133 Identities=18% Similarity=0.150 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCceeecCCC------------CCCHHH-------HhccCCCCceEEeeecC-----CchHHHHHHHHH
Q 021739 30 ECATARAASAAGTIMTLSSWA------------TSSVEE-------VSSTGPGIRFFQLYVTK-----HRNVDAQLVKRA 85 (308)
Q Consensus 30 ~~~~a~~a~~~g~~~~~s~~~------------~~~~e~-------i~~~~~~~~~~Ql~~~~-----d~~~~~~~~~~~ 85 (308)
|...|+.+.+.|+.++++.-| ..+++| ++...+.++.+ .=++. +++...+-+.++
T Consensus 26 Da~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vv-aD~pfgsy~~s~~~a~~na~rl 104 (275)
T 1o66_A 26 ESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIV-SDLPFGAYQQSKEQAFAAAAEL 104 (275)
T ss_dssp SHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEE-EECCTTSSSSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEE-EECCCCCccCCHHHHHHHHHHH
Q ss_pred HHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhcC
Q 021739 86 ERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITS 165 (308)
Q Consensus 86 ~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~~ 165 (308)
.+.|+.++.|- |.....+.|+.+.+. +
T Consensus 105 ~kaGa~aVklE----------------------------------------------------dg~e~~~~I~al~~a-g 131 (275)
T 1o66_A 105 MAAGAHMVKLE----------------------------------------------------GGVWMAETTEFLQMR-G 131 (275)
T ss_dssp HHTTCSEEEEE----------------------------------------------------CSGGGHHHHHHHHHT-T
T ss_pred HHcCCcEEEEC----------------------------------------------------CcHHHHHHHHHHHHc-C
Q ss_pred CCEEEEecCCH----------------------HHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeE
Q 021739 166 LPILVKGVLTA----------------------EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 166 ~Pv~vK~~~~~----------------------e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipv 223 (308)
+||+.-+.+++ ++++.+.++|||.|.+-. ...+...++.+.+ ++|+
T Consensus 132 IpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~----------vp~~~a~~it~~l--~iP~ 199 (275)
T 1o66_A 132 IPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKAHDDAGAAVVLMEC----------VLAELAKKVTETV--SCPT 199 (275)
T ss_dssp CCEEEEEESCGGGTTC-----------CHHHHHHHHHHHHHTTCSEEEEES----------CCHHHHHHHHHHC--SSCE
T ss_pred CCeEeeeccCceeecccCCeEEEeChHHHHHHHHHHHHHHHcCCcEEEEec----------CCHHHHHHHHHhC--CCCE
Q ss_pred EEecC
Q 021739 224 FLDGG 228 (308)
Q Consensus 224 ia~GG 228 (308)
|+-|.
T Consensus 200 igIGa 204 (275)
T 1o66_A 200 IGIGA 204 (275)
T ss_dssp EEESS
T ss_pred EEECC
No 468
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=87.86 E-value=14 Score=32.80 Aligned_cols=183 Identities=14% Similarity=0.118 Sum_probs=104.9
Q ss_pred CceEeccccCcccCCCHHHHHHHHHHHHcCCceee--c---CCCCCCHHHHhc-------cCCC--CceEEeeecCCchH
Q 021739 12 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--S---SWATSSVEEVSS-------TGPG--IRFFQLYVTKHRNV 77 (308)
Q Consensus 12 ~Pi~iapm~~~~~~~~~~~~~~a~~a~~~g~~~~~--s---~~~~~~~e~i~~-------~~~~--~~~~Ql~~~~d~~~ 77 (308)
.|-++.||.-.+-.+.+.-..+.+-..+.|+...+ + |..+.+.+|..+ ...+ +.+.... ..+.+.
T Consensus 19 ~~alvTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ 97 (307)
T 3s5o_A 19 YPPVTTPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSG-CESTQA 97 (307)
T ss_dssp ECBCCCCBCTTSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECC-CSSHHH
T ss_pred EEeeEccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecC-CCCHHH
Confidence 36677888644334554445566666778876443 2 234556655331 2222 4555543 346677
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHH
Q 021739 78 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 157 (308)
Q Consensus 78 ~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 157 (308)
..++.+.+++.|++++.+. .|...+ | + ..++ -..+..
T Consensus 98 ai~la~~A~~~Gadavlv~--~P~y~~-----------~-~--------------------~s~~---------~l~~~f 134 (307)
T 3s5o_A 98 TVEMTVSMAQVGADAAMVV--TPCYYR-----------G-R--------------------MSSA---------ALIHHY 134 (307)
T ss_dssp HHHHHHHHHHTTCSEEEEE--CCCTTG-----------G-G--------------------CCHH---------HHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEc--CCCcCC-----------C-C--------------------CCHH---------HHHHHH
Confidence 7788899999999998764 353210 0 0 0011 123566
Q ss_pred HHHHHhcCCCEEEEec-------CCHHHHHHHHHcC-CcEEEEecccccCCCCCcchHHHHHHHHHHcc-CCCeEEEecC
Q 021739 158 KWLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAK-GRVPVFLDGG 228 (308)
Q Consensus 158 ~~ir~~~~~Pv~vK~~-------~~~e~a~~~~~~G-~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~-~~ipvia~GG 228 (308)
+.|.+.+++||++=.+ ++++...++.+.. +-+|.-+ . .++..+.++.+... .++.|+ +|.
T Consensus 135 ~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKds--s--------gd~~~~~~~~~~~~~~~f~v~-~G~ 203 (307)
T 3s5o_A 135 TKVADLSPIPVVLYSVPANTGLDLPVDAVVTLSQHPNIVGMXDS--G--------GDVTRIGLIVHKTRKQDFQVL-AGS 203 (307)
T ss_dssp HHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEEEC--S--------CCHHHHHHHHHHTTTSSCEEE-ESS
T ss_pred HHHHhhcCCCEEEEeCCcccCCCCCHHHHHHHhcCCCEEEEEcC--C--------CCHHHHHHHHHhccCCCeEEE-eCc
Confidence 7788888999987653 5678888777532 2222211 1 13444555544432 345554 442
Q ss_pred CCCHHHHHHHHHcCCCEEEEchHH
Q 021739 229 VRRGTDVFKALALGASGVFVGRPV 252 (308)
Q Consensus 229 I~~~~d~~k~l~~GAd~V~ig~~~ 252 (308)
...+..++.+|++++.-+..-
T Consensus 204 ---d~~~l~~l~~G~~G~is~~an 224 (307)
T 3s5o_A 204 ---AGFLMASYALGAVGGVCALAN 224 (307)
T ss_dssp ---GGGHHHHHHHTCCEEECGGGG
T ss_pred ---HHHHHHHHHcCCCEEEechhh
Confidence 234778889999999877643
No 469
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=87.83 E-value=3.5 Score=37.77 Aligned_cols=42 Identities=21% Similarity=0.308 Sum_probs=35.4
Q ss_pred chHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 021739 205 ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 249 (308)
Q Consensus 205 ~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig 249 (308)
.+|+.+.++++.. ++||+.=| +.+.+|+.++.+.|||++.+.
T Consensus 204 ~~w~~i~~lr~~~--~~PvivK~-v~~~e~A~~a~~~GaD~I~vs 245 (352)
T 3sgz_A 204 FCWNDLSLLQSIT--RLPIILKG-ILTKEDAELAMKHNVQGIVVS 245 (352)
T ss_dssp CCHHHHHHHHHHC--CSCEEEEE-ECSHHHHHHHHHTTCSEEEEC
T ss_pred CCHHHHHHHHHhc--CCCEEEEe-cCcHHHHHHHHHcCCCEEEEe
Confidence 4678888888776 78998754 688999999999999999984
No 470
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=87.81 E-value=12 Score=33.10 Aligned_cols=116 Identities=16% Similarity=0.203 Sum_probs=0.0
Q ss_pred HHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHH----H
Q 021739 82 VKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKD----V 157 (308)
Q Consensus 82 ~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~----i 157 (308)
.+.++++|++.|-++ .+.....+...-....+++. .
T Consensus 47 A~l~e~aG~d~ilvG----------------------------------------dSl~~~~lG~~dt~~vTldemi~h~ 86 (281)
T 1oy0_A 47 ARIFDEAGIPVLLVG----------------------------------------DSAANVVYGYDTTVPISIDELIPLV 86 (281)
T ss_dssp HHHHHTTTCCEEEEC----------------------------------------TTHHHHTTCCSSSSSCCGGGTHHHH
T ss_pred HHHHHHcCCCEEEEC----------------------------------------HHHHHHHcCCCCCCCCCHHHHHHHH
Q ss_pred HHHHHhcCCCEEEEec------CCHHH----HHHHHH-cCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEE--
Q 021739 158 KWLQTITSLPILVKGV------LTAED----ASLAIQ-YGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF-- 224 (308)
Q Consensus 158 ~~ir~~~~~Pv~vK~~------~~~e~----a~~~~~-~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvi-- 224 (308)
+.+++.++.|+++-.. .+++. +.++.+ +|+++|.+-+ +....+.++.+.++ .+||+
T Consensus 87 ~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~na~rl~~eaGa~aVklEd--------g~e~~~~I~al~~a---gIpV~gH 155 (281)
T 1oy0_A 87 RGVVRGAPHALVVADLPFGSYEAGPTAALAAATRFLKDGGAHAVKLEG--------GERVAEQIACLTAA---GIPVMAH 155 (281)
T ss_dssp HHHHHHCTTSEEEEECCTTSSTTCHHHHHHHHHHHHHTTCCSEEEEEB--------SGGGHHHHHHHHHH---TCCEEEE
T ss_pred HHHHhcCCCCeEEEECCCCcccCCHHHHHHHHHHHHHHhCCeEEEECC--------cHHHHHHHHHHHHC---CCCEEee
Q ss_pred ---------EecCCC----------CHHHHHHHHHcCCCEEEE
Q 021739 225 ---------LDGGVR----------RGTDVFKALALGASGVFV 248 (308)
Q Consensus 225 ---------a~GGI~----------~~~d~~k~l~~GAd~V~i 248 (308)
..||.+ --+|+..+.++||+++.+
T Consensus 156 iGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivl 198 (281)
T 1oy0_A 156 IGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAVAEAGAFAVVM 198 (281)
T ss_dssp EECCC--------------CHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred ecCCcceecccCCeEEEeCcHHHHHHHHHHHHHHHcCCcEEEE
No 471
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=87.81 E-value=0.82 Score=39.35 Aligned_cols=41 Identities=24% Similarity=0.194 Sum_probs=35.8
Q ss_pred CHHHHHHHHHhc-CCCEEEEec-CCHHHHHHHHHcCCcEEEEec
Q 021739 153 NWKDVKWLQTIT-SLPILVKGV-LTAEDASLAIQYGAAGIIVSN 194 (308)
Q Consensus 153 ~~~~i~~ir~~~-~~Pv~vK~~-~~~e~a~~~~~~G~d~i~v~~ 194 (308)
..+.++++++.+ ++|+.+.+. .++|+++.+. .|||++++.+
T Consensus 167 ~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGS 209 (228)
T 3vzx_A 167 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVIVVGN 209 (228)
T ss_dssp CHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEEECT
T ss_pred CHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEEECh
Confidence 578999999999 799999965 7899999998 6999999854
No 472
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=87.78 E-value=9.1 Score=33.70 Aligned_cols=126 Identities=17% Similarity=0.204 Sum_probs=83.5
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccc
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 151 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 151 (308)
..|.+...+++++++++|++++-+..-.|-. +...++ +.+ .
T Consensus 48 ~~~~e~a~~~a~~~k~~ga~~~k~~~~kprt-----------------s~~~f~-----------g~g-----------~ 88 (276)
T 1vs1_A 48 VESWEQVREAALAVKEAGAHMLRGGAFKPRT-----------------SPYSFQ-----------GLG-----------L 88 (276)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECBSSCCCS-----------------STTSCC-----------CCT-----------H
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEeEEEeCCC-----------------Chhhhc-----------CCC-----------H
Confidence 4578899999999999999986544322211 000000 000 1
Q ss_pred cCHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCC-
Q 021739 152 LNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVR- 230 (308)
Q Consensus 152 ~~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~- 230 (308)
..++.++++++..++|++. ...+++.+..+.+. +|.+.|....- .....+.++.+ + +.||+.+-|..
T Consensus 89 ~gl~~l~~~~~~~Gl~~~t-e~~d~~~~~~l~~~-vd~~kIgs~~~-------~n~~ll~~~a~-~--~kPV~lk~G~~~ 156 (276)
T 1vs1_A 89 EGLKLLRRAGDEAGLPVVT-EVLDPRHVETVSRY-ADMLQIGARNM-------QNFPLLREVGR-S--GKPVLLKRGFGN 156 (276)
T ss_dssp HHHHHHHHHHHHHTCCEEE-ECCCGGGHHHHHHH-CSEEEECGGGT-------TCHHHHHHHHH-H--TCCEEEECCTTC
T ss_pred HHHHHHHHHHHHcCCcEEE-ecCCHHHHHHHHHh-CCeEEECcccc-------cCHHHHHHHHc-c--CCeEEEcCCCCC
Confidence 1256778888888999875 55788888999999 99999865321 23455666653 3 78999999997
Q ss_pred CHHHHHHHHH----cCCCEEEE
Q 021739 231 RGTDVFKALA----LGASGVFV 248 (308)
Q Consensus 231 ~~~d~~k~l~----~GAd~V~i 248 (308)
+.+|+..+++ .|..-+.+
T Consensus 157 t~~ei~~Ave~i~~~Gn~~i~L 178 (276)
T 1vs1_A 157 TVEELLAAAEYILLEGNWQVVL 178 (276)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEE
T ss_pred CHHHHHHHHHHHHHcCCCeEEE
Confidence 9999887765 47633333
No 473
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=87.71 E-value=1.9 Score=39.92 Aligned_cols=37 Identities=19% Similarity=0.194 Sum_probs=33.0
Q ss_pred HHHHHHHHhcCCCEEEEecCCHHHHHHHHHcC-CcEEEE
Q 021739 155 KDVKWLQTITSLPILVKGVLTAEDASLAIQYG-AAGIIV 192 (308)
Q Consensus 155 ~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G-~d~i~v 192 (308)
+ ++++|+.+++||+.-+..+++++..+++.| +|+|.+
T Consensus 298 ~-~~~ir~~~~iPvi~~G~it~~~a~~~l~~g~aD~V~i 335 (379)
T 3aty_A 298 V-VAWVRGSYSGVKISNLRYDFEEADQQIREGKVDAVAF 335 (379)
T ss_dssp H-HHHHHTTCCSCEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred H-HHHHHHHCCCcEEEECCCCHHHHHHHHHcCCCeEEEe
Confidence 5 889999999999988777999999999988 999976
No 474
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=87.65 E-value=14 Score=32.54 Aligned_cols=181 Identities=14% Similarity=0.047 Sum_probs=105.4
Q ss_pred CceEeccccCcccCCCHHHHHHHHHHHH-cCCceee--cC---CCCCCHHHHhc-------c-CCC-CceEEeeecCCch
Q 021739 12 MPIMIAPTAFQKMAHPEGECATARAASA-AGTIMTL--SS---WATSSVEEVSS-------T-GPG-IRFFQLYVTKHRN 76 (308)
Q Consensus 12 ~Pi~iapm~~~~~~~~~~~~~~a~~a~~-~g~~~~~--s~---~~~~~~e~i~~-------~-~~~-~~~~Ql~~~~d~~ 76 (308)
.|.++.||.-.+-.+.++-..+.+-..+ .|+...+ ++ ..+.+.+|..+ . ... +.+.... ..+.+
T Consensus 8 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~ 86 (293)
T 1f6k_A 8 FSALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVG-SVNLK 86 (293)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSCHH
T ss_pred EEeeEcCCCCCCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecC-CCCHH
Confidence 3666788854333455555667777777 8876543 32 24556665332 1 222 5566654 34667
Q ss_pred HHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHH
Q 021739 77 VDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKD 156 (308)
Q Consensus 77 ~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 156 (308)
...++.+.+++.|++++.+. .|... + .. ++- ..+.
T Consensus 87 ~ai~la~~a~~~Gadavlv~--~P~y~--------------~-------------------~~-~~~---------l~~~ 121 (293)
T 1f6k_A 87 EAVELGKYATELGYDCLSAV--TPFYY--------------K-------------------FS-FPE---------IKHY 121 (293)
T ss_dssp HHHHHHHHHHHHTCSEEEEE--CCCSS--------------C-------------------CC-HHH---------HHHH
T ss_pred HHHHHHHHHHhcCCCEEEEC--CCCCC--------------C-------------------CC-HHH---------HHHH
Confidence 77788899999999998765 35320 0 00 111 1345
Q ss_pred HHHHHHhcCCCEEEEec-------CCHHHHHHHHHcC-CcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecC
Q 021739 157 VKWLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGG 228 (308)
Q Consensus 157 i~~ir~~~~~Pv~vK~~-------~~~e~a~~~~~~G-~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GG 228 (308)
.+.|.+.+++||++=.+ ++++...++.+.. +-+|.-+. .+...+.++.+. .+++.|+. |.
T Consensus 122 f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiK~s~----------gd~~~~~~~~~~-~~~f~v~~-G~ 189 (293)
T 1f6k_A 122 YDTIIAETGSNMIVYSIPFLTGVNMGIEQFGELYKNPKVLGVKFTA----------GDFYLLERLKKA-YPNHLIWA-GF 189 (293)
T ss_dssp HHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHHHTSTTEEEEEECS----------CCHHHHHHHHHH-CTTSEEEE-CC
T ss_pred HHHHHHhCCCCEEEEECccccCcCCCHHHHHHHhcCCCEEEEEECC----------CCHHHHHHHHHh-CCCeEEEE-Cc
Confidence 67777788999987543 5778887777532 22332211 123344444443 23455543 32
Q ss_pred CCCHHHHHHHHHcCCCEEEEchHHH
Q 021739 229 VRRGTDVFKALALGASGVFVGRPVP 253 (308)
Q Consensus 229 I~~~~d~~k~l~~GAd~V~ig~~~l 253 (308)
...+..++.+|++++.-+..-+
T Consensus 190 ---d~~~~~~l~~G~~G~is~~~n~ 211 (293)
T 1f6k_A 190 ---DEMMLPAASLGVDGAIGSTFNV 211 (293)
T ss_dssp ---GGGHHHHHHTTCSEEEESTHHH
T ss_pred ---HHHHHHHHHCCCcEEEeCHHHh
Confidence 2347788899999998887543
No 475
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=87.49 E-value=3.6 Score=36.84 Aligned_cols=29 Identities=14% Similarity=0.220 Sum_probs=21.8
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCCC
Q 021739 72 TKHRNVDAQLVKRAERAGFKAIALTVDTP 100 (308)
Q Consensus 72 ~~d~~~~~~~~~~~~~~g~~~i~i~~~~p 100 (308)
..|++...+..++..+.|++.|+|+++.+
T Consensus 33 ~~~~~~a~~~A~~~v~~GAdiIDIg~g~~ 61 (300)
T 3k13_A 33 EKKYDEALSIARQQVEDGALVIDVNMDDG 61 (300)
T ss_dssp TTCHHHHHHHHHHHHHTTCSEEEEECCCT
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCCC
Confidence 34666666677777789999999998643
No 476
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=87.47 E-value=1.4 Score=37.93 Aligned_cols=41 Identities=20% Similarity=0.144 Sum_probs=33.4
Q ss_pred CHHHHHHHHHhc-----CCCEEEEecCCHHHHHHHHHcCCcEEEEe
Q 021739 153 NWKDVKWLQTIT-----SLPILVKGVLTAEDASLAIQYGAAGIIVS 193 (308)
Q Consensus 153 ~~~~i~~ir~~~-----~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~ 193 (308)
.++.|+++|+.. +++|.+=+..+.+.+..+.++|||.++++
T Consensus 150 ~l~kI~~lr~~~~~~~~~~~I~VdGGI~~~~~~~~~~aGAd~~V~G 195 (231)
T 3ctl_A 150 MLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGADVFIVG 195 (231)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEEESCCSTTTHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHhccCCCceEEEECCcCHHHHHHHHHcCCCEEEEc
Confidence 466677777654 57888888889999999999999999875
No 477
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=87.40 E-value=14 Score=32.27 Aligned_cols=133 Identities=17% Similarity=0.162 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCceeecCCC------------CCCHHH-------HhccCCCCceEEeeecC----CchHHHHHHHHHH
Q 021739 30 ECATARAASAAGTIMTLSSWA------------TSSVEE-------VSSTGPGIRFFQLYVTK----HRNVDAQLVKRAE 86 (308)
Q Consensus 30 ~~~~a~~a~~~g~~~~~s~~~------------~~~~e~-------i~~~~~~~~~~Ql~~~~----d~~~~~~~~~~~~ 86 (308)
|...|+.+.+.|+...+..-| ..+++| ++...+.++.+ .=++. +++...+-+.++.
T Consensus 26 D~~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vv-aD~pfgsy~~~~~a~~~a~rl~ 104 (264)
T 1m3u_A 26 DYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLL-ADLPFMAYATPEQAFENAATVM 104 (264)
T ss_dssp SHHHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEE-EECCTTSSSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEE-EECCCCCcCCHHHHHHHHHHHH
Q ss_pred HcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHHHHHHHHhcCC
Q 021739 87 RAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSL 166 (308)
Q Consensus 87 ~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ir~~~~~ 166 (308)
+.|+.++.+- |.....+.|+.+.+. ++
T Consensus 105 kaGa~aVklE----------------------------------------------------gg~e~~~~I~al~~a-gi 131 (264)
T 1m3u_A 105 RAGANMVKIE----------------------------------------------------GGEWLVETVQMLTER-AV 131 (264)
T ss_dssp HTTCSEEECC----------------------------------------------------CSGGGHHHHHHHHHT-TC
T ss_pred HcCCCEEEEC----------------------------------------------------CcHHHHHHHHHHHHC-CC
Q ss_pred CEEEEecCCH-----------------------HHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeE
Q 021739 167 PILVKGVLTA-----------------------EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 167 Pv~vK~~~~~-----------------------e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipv 223 (308)
||+--+.+++ ++++.+.++|||.|.+-. ...+...++.+.+ ++|+
T Consensus 132 pV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA~a~~eAGA~~ivlE~----------vp~~~a~~it~~l--~iP~ 199 (264)
T 1m3u_A 132 PVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAAGAQLLVLEC----------VPVELAKRITEAL--AIPV 199 (264)
T ss_dssp CEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHHHHHHHHTCCEEEEES----------CCHHHHHHHHHHC--SSCE
T ss_pred CeEeeecCCceeecccCCeEEEeCCHHHHHHHHHHHHHHHHCCCcEEEEec----------CCHHHHHHHHHhC--CCCE
Q ss_pred EEecC
Q 021739 224 FLDGG 228 (308)
Q Consensus 224 ia~GG 228 (308)
|+-|.
T Consensus 200 igIGa 204 (264)
T 1m3u_A 200 IGIGA 204 (264)
T ss_dssp EEESS
T ss_pred EEeCC
No 478
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=87.29 E-value=2.8 Score=36.57 Aligned_cols=71 Identities=13% Similarity=0.219 Sum_probs=50.6
Q ss_pred CHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHHcCCCEEEEchH
Q 021739 175 TAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRP 251 (308)
Q Consensus 175 ~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~ig~~ 251 (308)
++...-+..++||++|.|-.-. .+.. .+.+.|..+++.+ ++||+--==|-++.++.++...|||+|.+=-.
T Consensus 65 dp~~iA~~~~~GA~aiSVLTd~--~~F~--Gs~~~L~~vr~~v--~lPvLrKDFiid~yQI~eAr~~GADaILLI~a 135 (258)
T 4a29_A 65 DPIEYAKFMERYAVGLSITTEE--KYFN--GSYETLRKIASSV--SIPILMSDFIVKESQIDDAYNLGADTVLLIVK 135 (258)
T ss_dssp CHHHHHHHHTTTCSEEEEECCS--TTTC--CCHHHHHHHHTTC--SSCEEEESCCCSHHHHHHHHHHTCSEEEEEGG
T ss_pred CHHHHHHHHhCCCeEEEEeCCC--CCCC--CCHHHHHHHHHhc--CCCEeeccccccHHHHHHHHHcCCCeeehHHh
Confidence 4444445667999999874311 1112 2467777777665 79999887789999999999999999975433
No 479
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=87.17 E-value=0.85 Score=39.59 Aligned_cols=41 Identities=24% Similarity=0.230 Sum_probs=36.1
Q ss_pred CHHHHHHHHHhc-CCCEEEEec-CCHHHHHHHHHcCCcEEEEec
Q 021739 153 NWKDVKWLQTIT-SLPILVKGV-LTAEDASLAIQYGAAGIIVSN 194 (308)
Q Consensus 153 ~~~~i~~ir~~~-~~Pv~vK~~-~~~e~a~~~~~~G~d~i~v~~ 194 (308)
..+.++++++.+ ++|+.+.+. .++++++.+.+ |||++++..
T Consensus 169 ~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGS 211 (240)
T 1viz_A 169 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-HADVIVVGN 211 (240)
T ss_dssp CHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-TCSEEEECT
T ss_pred hHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-CCCEEEECh
Confidence 478899999999 999999965 78999999999 999998853
No 480
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=87.10 E-value=7.3 Score=35.82 Aligned_cols=88 Identities=16% Similarity=0.144 Sum_probs=56.5
Q ss_pred HHH-hcCCCEEEEec-------CCHHHHHHHH-HcCCcEEEEeccccc---CC--CCCc--chHHHHHHHHHHccCCCeE
Q 021739 160 LQT-ITSLPILVKGV-------LTAEDASLAI-QYGAAGIIVSNHGAR---QL--DYVP--ATVMALEEVVQAAKGRVPV 223 (308)
Q Consensus 160 ir~-~~~~Pv~vK~~-------~~~e~a~~~~-~~G~d~i~v~~~gg~---~~--~~~~--~~~~~l~~i~~~~~~~ipv 223 (308)
+|+ ..+.|++.... .+.+.+.++. ..++|++.++-.... +. +... ..++.+.++++.+ ++||
T Consensus 113 vr~~ap~~~~~anlg~~ql~~~~~~~~~~~av~~~~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~--~vPV 190 (368)
T 3vkj_A 113 VRKVAPTIPIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKEL--SVPI 190 (368)
T ss_dssp HHHHCSSSCEEEEEEGGGGGTTCCHHHHHHHHHHTTCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTC--SSCE
T ss_pred HHHhCcCcceecCcCeeecCCCCCHHHHHHHHHHhcCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHc--CCCE
Confidence 443 34788876533 2457776644 467888887643210 10 1111 1456677776655 7999
Q ss_pred EEe--cCCCCHHHHHHHHHcCCCEEEEc
Q 021739 224 FLD--GGVRRGTDVFKALALGASGVFVG 249 (308)
Q Consensus 224 ia~--GGI~~~~d~~k~l~~GAd~V~ig 249 (308)
++- |+-.+++++.++..+|||++.++
T Consensus 191 ivK~vG~g~s~~~A~~l~~aGad~I~V~ 218 (368)
T 3vkj_A 191 IVKESGNGISMETAKLLYSYGIKNFDTS 218 (368)
T ss_dssp EEECSSSCCCHHHHHHHHHTTCCEEECC
T ss_pred EEEeCCCCCCHHHHHHHHhCCCCEEEEe
Confidence 995 55568999999999999999983
No 481
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=87.08 E-value=0.8 Score=39.61 Aligned_cols=41 Identities=17% Similarity=0.136 Sum_probs=35.9
Q ss_pred CHHHHHHHHHhc-CCCEEEEec-CCHHHHHHHHHcCCcEEEEec
Q 021739 153 NWKDVKWLQTIT-SLPILVKGV-LTAEDASLAIQYGAAGIIVSN 194 (308)
Q Consensus 153 ~~~~i~~ir~~~-~~Pv~vK~~-~~~e~a~~~~~~G~d~i~v~~ 194 (308)
..+.++++|+.+ ++|+++... .++++++.+.+ |+|++++.+
T Consensus 173 ~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGS 215 (235)
T 3w01_A 173 DVSKVQAVSEHLTETQLFYGGGISSEQQATEMAA-IADTIIVGD 215 (235)
T ss_dssp CHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT-TSSEEEECT
T ss_pred CHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc-CCCEEEECC
Confidence 478899999998 899999965 78999999988 999999854
No 482
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=87.04 E-value=5.3 Score=35.81 Aligned_cols=91 Identities=19% Similarity=0.180 Sum_probs=59.2
Q ss_pred HHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEeccc-----ccCCCCCcchHHH----HHHHHHHccCCCeEEEe
Q 021739 156 DVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHG-----ARQLDYVPATVMA----LEEVVQAAKGRVPVFLD 226 (308)
Q Consensus 156 ~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~g-----g~~~~~~~~~~~~----l~~i~~~~~~~ipvia~ 226 (308)
.++++++ .+-|+.+-+..+.-.|+.+.++|+|+|.+++.+ |. .|.++.+++. +..+.+.. ++||+++
T Consensus 20 ~lr~l~~-~~~~i~~~~ayD~~sA~l~e~aG~dai~vs~~s~a~~~G~-pD~~~vt~~em~~~~~~I~r~~--~~pviaD 95 (305)
T 3ih1_A 20 RFRALVE-ANEILQIPGAHDAMAALVARNTGFLALYLSGAAYTASKGL-PDLGIVTSTEVAERARDLVRAT--DLPVLVD 95 (305)
T ss_dssp HHHHHHH-SSSCEEEEBCSSHHHHHHHHHTTCSCEEECHHHHHHHHTC-CSSSCSCHHHHHHHHHHHHHHH--CCCEEEE
T ss_pred HHHHHHh-CCCcEEEecCcCHHHHHHHHHcCCCEEEECcHHHHHhCCC-CCCCcCCHHHHHHHHHHHHHhc--CCCEEEE
Confidence 3444443 256888878888899999999999999998722 21 1223334433 23444444 6899998
Q ss_pred c--CCCCHHHHH----HHHHcCCCEEEEch
Q 021739 227 G--GVRRGTDVF----KALALGASGVFVGR 250 (308)
Q Consensus 227 G--GI~~~~d~~----k~l~~GAd~V~ig~ 250 (308)
. |..++.++. +....||++|.+=-
T Consensus 96 ~d~Gyg~~~~v~~~v~~l~~aGaagv~iED 125 (305)
T 3ih1_A 96 IDTGFGGVLNVARTAVEMVEAKVAAVQIED 125 (305)
T ss_dssp CTTCSSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCcEEEECC
Confidence 7 444555554 34458999997754
No 483
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=87.04 E-value=6.4 Score=36.64 Aligned_cols=95 Identities=16% Similarity=0.081 Sum_probs=60.7
Q ss_pred HHHHHHHHHhcC--CCEEEEec--CC--HHHHHHHHHc--CCcEEEEecccccCCCCCcchHHHHHHHHHHc---c-CCC
Q 021739 154 WKDVKWLQTITS--LPILVKGV--LT--AEDASLAIQY--GAAGIIVSNHGARQLDYVPATVMALEEVVQAA---K-GRV 221 (308)
Q Consensus 154 ~~~i~~ir~~~~--~Pv~vK~~--~~--~e~a~~~~~~--G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~---~-~~i 221 (308)
.+.++..++.++ .++.+ .+ .+ .+++..+.+. |+|+|.+.+...+. + ...+.+.++++.+ . .++
T Consensus 197 ~~A~~~~~~~~p~~~~~~v-lvDT~d~~~~~al~~a~~l~~~d~IrlDs~~~~~---g-d~~~~v~~v~~~ld~~G~~~~ 271 (398)
T 2i1o_A 197 EEAWKLTLENTKNGQKSVL-LIDTYMDEKFAAIKIAEMFDKVDYIRLDTPSSRR---G-NFEALIREVRWELALRGRSDI 271 (398)
T ss_dssp HHHHHHHHHTCCTTSCCEE-ECCSSSCHHHHHHHHHTTCSCCCEEEECCCGGGC---S-CHHHHHHHHHHHHHHTTCTTS
T ss_pred HHHHHHHHHhCCCCCCEEE-EEcCchHHHHHHHHHHHhhcCCcEEEeCCCCCCc---c-cHHHHHHHHHHHHHhCCCCce
Confidence 566777777664 44443 23 22 3445555555 99999987742110 1 1233444444332 2 258
Q ss_pred eEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 021739 222 PVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 254 (308)
Q Consensus 222 pvia~GGI~~~~d~~k~l~~GAd~V~ig~~~l~ 254 (308)
.|++||||. .+.+.+..+.|+|.+.+|+-+..
T Consensus 272 ~I~aSggl~-~~~i~~l~~~GvD~~gvGt~l~~ 303 (398)
T 2i1o_A 272 KIMVSGGLD-ENTVKKLREAGAEAFGVGTSISS 303 (398)
T ss_dssp EEEEESSCC-HHHHHHHHHTTCCEEEECHHHHT
T ss_pred EEEEeCCCC-HHHHHHHHHcCCCEEEeCcccCC
Confidence 999999995 88888888899999999997654
No 484
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=87.02 E-value=7.4 Score=32.59 Aligned_cols=78 Identities=17% Similarity=-0.063 Sum_probs=51.8
Q ss_pred EEEec--CCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHH-cCCCE
Q 021739 169 LVKGV--LTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALA-LGASG 245 (308)
Q Consensus 169 ~vK~~--~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~-~GAd~ 245 (308)
.+|++ .++++++.+.++|+|++-+.-.... ...-+.+...++.+.++..+..++.-==.+.+++.+... ++.|.
T Consensus 2 ~vKICGit~~eda~~a~~~GaD~iGfif~~~S---pR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~ 78 (203)
T 1v5x_A 2 RVKICGITRLEDALLAEALGAFALGFVLAPGS---RRRIAPEAARAIGEALGPFVVRVGVFRDQPPEEVLRLMEEARLQV 78 (203)
T ss_dssp EEEECCCCCHHHHHHHHHHTCSEEEEECCTTC---TTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHTTCSE
T ss_pred cEEEcCCCcHHHHHHHHHcCCCEEEEEecCCC---CCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCE
Confidence 36876 6799999999999999976532211 111234555666666654455555543356788887776 78999
Q ss_pred EEEc
Q 021739 246 VFVG 249 (308)
Q Consensus 246 V~ig 249 (308)
|++-
T Consensus 79 vQLH 82 (203)
T 1v5x_A 79 AQLH 82 (203)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9984
No 485
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=87.01 E-value=4.4 Score=34.51 Aligned_cols=76 Identities=18% Similarity=0.082 Sum_probs=50.3
Q ss_pred HHHHHHHHcCCcEEEEecccccCCCCC-cchHHHHHHHHHHccC-CCeEEEecCCCCHHHHHHHH----HcCCCEEEEch
Q 021739 177 EDASLAIQYGAAGIIVSNHGARQLDYV-PATVMALEEVVQAAKG-RVPVFLDGGVRRGTDVFKAL----ALGASGVFVGR 250 (308)
Q Consensus 177 e~a~~~~~~G~d~i~v~~~gg~~~~~~-~~~~~~l~~i~~~~~~-~ipvia~GGI~~~~d~~k~l----~~GAd~V~ig~ 250 (308)
.+++.+.+.|||.|.+...-|.-.++. ....+.+..+++.... .+|+|..-+..+.+.+.++- ++|||.|-..+
T Consensus 75 ~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTsT 154 (220)
T 1ub3_A 75 LEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGGADFLKTST 154 (220)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCC
T ss_pred HHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeCC
Confidence 467889999999999864322100011 1123455666666533 48888888888888877655 37999998886
Q ss_pred HH
Q 021739 251 PV 252 (308)
Q Consensus 251 ~~ 252 (308)
.|
T Consensus 155 Gf 156 (220)
T 1ub3_A 155 GF 156 (220)
T ss_dssp SS
T ss_pred CC
Confidence 44
No 486
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=86.85 E-value=17 Score=32.52 Aligned_cols=110 Identities=19% Similarity=0.255 Sum_probs=72.4
Q ss_pred CCHHHHHHHH-HcCCcEEEEec---ccccCCCC-CcchHHHHHHHHHHccCCCeEEEecCC-------------------
Q 021739 174 LTAEDASLAI-QYGAAGIIVSN---HGARQLDY-VPATVMALEEVVQAAKGRVPVFLDGGV------------------- 229 (308)
Q Consensus 174 ~~~e~a~~~~-~~G~d~i~v~~---~gg~~~~~-~~~~~~~l~~i~~~~~~~ipvia~GGI------------------- 229 (308)
.+|+++.... +.|+|.+-++. ||.+..++ ..-.++.|.++.+.+ .+|++.=||=
T Consensus 153 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~--~vpLVlHGgSsv~~~~~~~~~~~gg~~~~ 230 (305)
T 1rvg_A 153 TNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLV--PAPLVLHGASAVPPELVERFRASGGEIGE 230 (305)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHC--CSCEEECSCCCCCHHHHHHHHHTTCCCCS
T ss_pred CCHHHHHHHHHHHCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhc--CCCEEEeCCCCCcHHHHHHHHhhcccccc
Confidence 4578877665 58999999875 33222111 123678889998877 5999988864
Q ss_pred --C-CHHHHHHHHHcCCCEEEEchHHHHhcc--------cC----CH-HHHHHHHHHHHHHHHHHHHHcCCC
Q 021739 230 --R-RGTDVFKALALGASGVFVGRPVPFSLA--------VD----GE-AGVRKVLQMLRDEFELTMALSGCR 285 (308)
Q Consensus 230 --~-~~~d~~k~l~~GAd~V~ig~~~l~~~~--------~~----G~-~~v~~~i~~l~~~l~~~m~~~G~~ 285 (308)
. ..+++.+++..|..=+-+++-+-++.. .. .+ .-+....+.+++.++..|+.+|..
T Consensus 231 ~~G~p~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~~~~~~dpr~~l~~~~~a~~~~v~~~~~~~gs~ 302 (305)
T 1rvg_A 231 AAGIHPEDIKKAISLGIAKINTDTDLRLAFTALIREALNKNPKEFDPRKYLGPAREAVKEVVKSRMELFGSV 302 (305)
T ss_dssp CBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCTHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CCCCCHHHHHHHHHCCCeEEEEChHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 2 467788999999999999996644321 00 11 123334456777777777777754
No 487
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=86.63 E-value=7.5 Score=32.59 Aligned_cols=78 Identities=12% Similarity=-0.074 Sum_probs=51.8
Q ss_pred EEEec--CCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEecCCCCHHHHHHHHH-cCCCE
Q 021739 169 LVKGV--LTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALA-LGASG 245 (308)
Q Consensus 169 ~vK~~--~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d~~k~l~-~GAd~ 245 (308)
.+|++ .++++++.+.++|+|++-+.-.... ...-+.+...++.+.++..+..++.-==.+.+++.+... ++.|.
T Consensus 3 ~vKICGit~~eda~~a~~~GaD~iGfif~~~S---pR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~ 79 (205)
T 1nsj_A 3 RVKICGITNLEDALFSVESGADAVGFVFYPKS---KRYISPEDARRISVELPPFVFRVGVFVNEEPEKILDVASYVQLNA 79 (205)
T ss_dssp EEEECCCCSHHHHHHHHHHTCSEEEEECCTTC---TTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHHTCSE
T ss_pred cEEECCCCcHHHHHHHHHcCCCEEEEEecCCC---CCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCE
Confidence 46877 6799999999999999976532211 111234555666666654455555443356788877766 79999
Q ss_pred EEEc
Q 021739 246 VFVG 249 (308)
Q Consensus 246 V~ig 249 (308)
|++-
T Consensus 80 vQLH 83 (205)
T 1nsj_A 80 VQLH 83 (205)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9984
No 488
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=86.55 E-value=4.3 Score=35.87 Aligned_cols=150 Identities=13% Similarity=0.041 Sum_probs=0.0
Q ss_pred CchHHHHHHHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhccc--c
Q 021739 74 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDR--S 151 (308)
Q Consensus 74 d~~~~~~~~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~--~ 151 (308)
+.+...++++.+++.|++.|.++. ...+...| .
T Consensus 24 ~~e~k~~i~~~L~~~Gv~~IE~g~---------------------------------------------~~~~~~~p~~~ 58 (295)
T 1ydn_A 24 PTADKIALINRLSDCGYARIEATS---------------------------------------------FVSPKWVPQLA 58 (295)
T ss_dssp CHHHHHHHHHHHTTTTCSEEEEEE---------------------------------------------CSCTTTCGGGT
T ss_pred CHHHHHHHHHHHHHcCcCEEEEcc---------------------------------------------CcCcccccccc
Q ss_pred cCHHHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEecccc---------cCCCCCcchHHHHHHHHHHccCCCe
Q 021739 152 LNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGA---------RQLDYVPATVMALEEVVQAAKGRVP 222 (308)
Q Consensus 152 ~~~~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~gg---------~~~~~~~~~~~~l~~i~~~~~~~ip 222 (308)
-.++.++.+++..+.|+.+=. .+.++++++.++|++.|.++.... +............-+..+.....+.
T Consensus 59 ~~~e~~~~i~~~~~~~v~~l~-~n~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~ 137 (295)
T 1ydn_A 59 DSREVMAGIRRADGVRYSVLV-PNMKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIR 137 (295)
T ss_dssp THHHHHHHSCCCSSSEEEEEC-SSHHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHhCCCCEEEEEe-CCHHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEE
Q ss_pred --EEEec-----CCCCHHHHHHHHH----cCCCEEEEchHHHHhcccCCHHHHHHHHHHHHH
Q 021739 223 --VFLDG-----GVRRGTDVFKALA----LGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRD 273 (308)
Q Consensus 223 --via~G-----GI~~~~d~~k~l~----~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~ 273 (308)
|...+ +-.+++++.+... +|||.+.++ -..+..-+..+.+.++.+++
T Consensus 138 ~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~----Dt~G~~~P~~~~~lv~~l~~ 195 (295)
T 1ydn_A 138 GYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLG----DTIGRGTPDTVAAMLDAVLA 195 (295)
T ss_dssp EEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEE----ETTSCCCHHHHHHHHHHHHT
T ss_pred EEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEec----CCCCCcCHHHHHHHHHHHHH
No 489
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=86.53 E-value=8.8 Score=34.55 Aligned_cols=91 Identities=25% Similarity=0.291 Sum_probs=59.9
Q ss_pred HHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEeccc------ccCCCCCcchHHHH----HHHHHHccCCCeEEEe
Q 021739 157 VKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHG------ARQLDYVPATVMAL----EEVVQAAKGRVPVFLD 226 (308)
Q Consensus 157 i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~g------g~~~~~~~~~~~~l----~~i~~~~~~~ipvia~ 226 (308)
++++++. +-|+.+-+..+.-.|+.+.++|+|+|.+++.+ |. .|.+.-+++.+ ..+.+.+ .++||+++
T Consensus 31 lr~l~~~-~~~i~~~~ayD~~sA~i~e~aGfdai~vs~~~~a~~~lG~-pD~~~vt~~em~~~~~~I~r~~-~~~PviaD 107 (318)
T 1zlp_A 31 MHRLIEE-HGSVLMPGVQDALSAAVVEKTGFHAAFVSGYSVSAAMLGL-PDFGLLTTTEVVEATRRITAAA-PNLCVVVD 107 (318)
T ss_dssp HHHHHHH-SSSEEEEEECSHHHHHHHHHTTCSEEEECHHHHHHHHHCC-CSSSCSCHHHHHHHHHHHHHHS-SSSEEEEE
T ss_pred HHHHHhC-CCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHhhHhcCC-CCCCCCCHHHHHHHHHHHHhhc-cCCCEEEe
Confidence 4444432 56888888889999999999999999998742 11 12333344433 3333333 26999999
Q ss_pred c--CCCCHHHHH----HHHHcCCCEEEEch
Q 021739 227 G--GVRRGTDVF----KALALGASGVFVGR 250 (308)
Q Consensus 227 G--GI~~~~d~~----k~l~~GAd~V~ig~ 250 (308)
. |..++.++. +.+..||++|.|=-
T Consensus 108 ~d~Gyg~~~~v~~tv~~l~~aGaagv~iED 137 (318)
T 1zlp_A 108 GDTGGGGPLNVQRFIRELISAGAKGVFLED 137 (318)
T ss_dssp CTTCSSSHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCcEEEECC
Confidence 8 444665554 45568999998843
No 490
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=86.49 E-value=6.9 Score=35.40 Aligned_cols=84 Identities=19% Similarity=0.175 Sum_probs=55.1
Q ss_pred cCCCEEEEec--CCHHHH-HHHHHcCCcEEEEecccccCC---CCCc---chHHHHHHHHHHccCCCeEEEe--cCCCCH
Q 021739 164 TSLPILVKGV--LTAEDA-SLAIQYGAAGIIVSNHGARQL---DYVP---ATVMALEEVVQAAKGRVPVFLD--GGVRRG 232 (308)
Q Consensus 164 ~~~Pv~vK~~--~~~e~a-~~~~~~G~d~i~v~~~gg~~~---~~~~---~~~~~l~~i~~~~~~~ipvia~--GGI~~~ 232 (308)
.+.|+++... .+.+.. +.+..+|+|+|.+........ .+.+ ..++.+.++++.+ ++||+.- |...+.
T Consensus 115 ~~~pv~~~i~~~~~~~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~--~~Pv~vK~~~~~~~~ 192 (349)
T 1p0k_A 115 PNGLIFANLGSEATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRV--SVPVIVKEVGFGMSK 192 (349)
T ss_dssp SSSCEEEEEETTCCHHHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHC--SSCEEEEEESSCCCH
T ss_pred CCceeEEeecCCCCHHHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHc--CCCEEEEecCCCCCH
Confidence 5789887654 455544 445678999998754311100 0111 1346677777665 7898885 444789
Q ss_pred HHHHHHHHcCCCEEEEc
Q 021739 233 TDVFKALALGASGVFVG 249 (308)
Q Consensus 233 ~d~~k~l~~GAd~V~ig 249 (308)
+++..+.++|||++.+.
T Consensus 193 ~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 193 ASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp HHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHcCCCEEEEc
Confidence 99999999999999984
No 491
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=86.46 E-value=4.5 Score=33.62 Aligned_cols=36 Identities=22% Similarity=0.243 Sum_probs=29.8
Q ss_pred HHHHHHHHhcCCCEEEEec-CCHHHHHHHHHcCCcEEEEec
Q 021739 155 KDVKWLQTITSLPILVKGV-LTAEDASLAIQYGAAGIIVSN 194 (308)
Q Consensus 155 ~~i~~ir~~~~~Pv~vK~~-~~~e~a~~~~~~G~d~i~v~~ 194 (308)
+.++++ ++.|+++.+- .+.|+++. .++||++|+.++
T Consensus 142 ~~I~~v---~~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~ 178 (188)
T 1vkf_A 142 KVARKI---PGRTVIAAGLVETEEEARE-ILKHVSAISTSS 178 (188)
T ss_dssp HHHTTS---TTSEEEEESCCCSHHHHHH-HTTTSSEEEECC
T ss_pred HHHHHh---cCCCEEEECCcCCHHHHHH-HHCCCeEEEeCC
Confidence 455555 6889999975 68999999 999999998765
No 492
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=86.45 E-value=1.2 Score=38.80 Aligned_cols=42 Identities=21% Similarity=0.321 Sum_probs=36.3
Q ss_pred CHHHHHHHHHhcCCCEEEEecCC-HHHHHHHHHcCCcEEEEec
Q 021739 153 NWKDVKWLQTITSLPILVKGVLT-AEDASLAIQYGAAGIIVSN 194 (308)
Q Consensus 153 ~~~~i~~ir~~~~~Pv~vK~~~~-~e~a~~~~~~G~d~i~v~~ 194 (308)
..+.++++++..++||++.+..+ ++.+..+.++|+|++++..
T Consensus 189 ~~~~i~~v~~~~~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGS 231 (262)
T 1rd5_A 189 VESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWGADGVIIGS 231 (262)
T ss_dssp HHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHHhhcCCeEEEECCcCCHHHHHHHHHcCCCEEEECh
Confidence 35679999998899999987765 9999999999999998854
No 493
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=86.40 E-value=5.3 Score=35.59 Aligned_cols=92 Identities=21% Similarity=0.198 Sum_probs=57.0
Q ss_pred HHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEeccc-ccC---CCCCcchHH-HH---HHHHHHccCCCeEEEec
Q 021739 156 DVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHG-ARQ---LDYVPATVM-AL---EEVVQAAKGRVPVFLDG 227 (308)
Q Consensus 156 ~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~g-g~~---~~~~~~~~~-~l---~~i~~~~~~~ipvia~G 227 (308)
.++++++ .+-|+.+-+..+.-.|+.+.++|+|+|.+++.+ +.. .|.+.-+++ .+ ..+.+.. ++||+++.
T Consensus 10 ~lr~l~~-~~~~i~~~~a~D~~sA~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~--~~PviaD~ 86 (295)
T 1s2w_A 10 QLKQMLN-SKDLEFIMEAHNGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDAS--DVPILLDA 86 (295)
T ss_dssp HHHHHHH-SSSCEEEEEECSHHHHHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTC--SSCEEEEC
T ss_pred HHHHHHh-CCCcEEEecCCCHHHHHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcC--CCCEEecC
Confidence 3455543 356888888889999999999999999998632 111 111222222 22 3333333 69999997
Q ss_pred --CCCCHHHHH----HHHHcCCCEEEEch
Q 021739 228 --GVRRGTDVF----KALALGASGVFVGR 250 (308)
Q Consensus 228 --GI~~~~d~~----k~l~~GAd~V~ig~ 250 (308)
|..++.++. +.++.||++|.|=-
T Consensus 87 d~Gyg~~~~v~~~v~~l~~aGaagv~iED 115 (295)
T 1s2w_A 87 DTGYGNFNNARRLVRKLEDRGVAGACLED 115 (295)
T ss_dssp CSSCSSHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEECC
Confidence 455655554 45568999998743
No 494
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=86.31 E-value=5.5 Score=34.71 Aligned_cols=126 Identities=21% Similarity=0.243 Sum_probs=0.0
Q ss_pred HHHHHHcCCcEEEEecCCCCCCcchHHhhhccCCCCccccccccccccccCCCCCCchhhhHhhhhcccccCHHH----H
Q 021739 82 VKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKD----V 157 (308)
Q Consensus 82 ~~~~~~~g~~~i~i~~~~p~~~~r~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~----i 157 (308)
.+.++++|+++|-++ +.+.+..+...-....+++. +
T Consensus 33 A~~~~~aG~dai~vg----------------------------------------~~s~a~~~G~pD~~~vt~~em~~~~ 72 (255)
T 2qiw_A 33 AGLVEEAGFSGLTIG----------------------------------------SHPVADATGSSDGENMNFADYMAVV 72 (255)
T ss_dssp HHHHHHTTCSCEEEC----------------------------------------HHHHHHHTTCCTTTCSCHHHHHHHH
T ss_pred HHHHHHcCCCEEEEC----------------------------------------hHHHHHhCCCCCCCCcCHHHHHHHH
Q ss_pred HHHHHhcCCCEEEEec------CCHHHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccC----CCeEEEec
Q 021739 158 KWLQTITSLPILVKGV------LTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKG----RVPVFLDG 227 (308)
Q Consensus 158 ~~ir~~~~~Pv~vK~~------~~~e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~----~ipvia~G 227 (308)
+.|.+.++.||++=.- . .+.++++.++|+++|.+-+........-.+..+...+++..... .+|+...|
T Consensus 73 ~~I~r~~~~pviaD~~~Gyg~~~-~~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~a 151 (255)
T 2qiw_A 73 KKITSAVSIPVSVDVESGYGLSP-ADLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVING 151 (255)
T ss_dssp HHHHHHCSSCEEEECTTCTTCCH-HHHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred HHHHhcCCCCEEeccCCCcCcHH-HHHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEE
Q ss_pred CCC---------------CHHHHHHHHHcCCCEEEE
Q 021739 228 GVR---------------RGTDVFKALALGASGVFV 248 (308)
Q Consensus 228 GI~---------------~~~d~~k~l~~GAd~V~i 248 (308)
-.. .-+++..+.++|||++.+
T Consensus 152 Rtd~~~~g~~~~~~~~~~ai~ra~a~~eAGAd~i~~ 187 (255)
T 2qiw_A 152 RTDAVKLGADVFEDPMVEAIKRIKLMEQAGARSVYP 187 (255)
T ss_dssp EECHHHHCTTTSSSHHHHHHHHHHHHHHHTCSEEEE
T ss_pred EechhhccCCcchHHHHHHHHHHHHHHHcCCcEEEE
No 495
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=86.26 E-value=0.82 Score=39.52 Aligned_cols=41 Identities=24% Similarity=0.168 Sum_probs=36.1
Q ss_pred CHHHHHHHHHhc-CCCEEEEec-CCHHHHHHHHHcCCcEEEEec
Q 021739 153 NWKDVKWLQTIT-SLPILVKGV-LTAEDASLAIQYGAAGIIVSN 194 (308)
Q Consensus 153 ~~~~i~~ir~~~-~~Pv~vK~~-~~~e~a~~~~~~G~d~i~v~~ 194 (308)
..+.++++++.+ ++|+.+.+. .++++++.+.+ |||++++..
T Consensus 177 ~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGS 219 (234)
T 2f6u_A 177 NPELVAEVKKVLDKARLFYGGGIDSREKAREMLR-YADTIIVGN 219 (234)
T ss_dssp CHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-HSSEEEECH
T ss_pred hHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-CCCEEEECh
Confidence 478899999999 999999965 78999999999 999998843
No 496
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=86.15 E-value=3.5 Score=37.62 Aligned_cols=24 Identities=13% Similarity=0.048 Sum_probs=20.3
Q ss_pred CCchHHHHHHHHHHHcCCcEEEEe
Q 021739 73 KHRNVDAQLVKRAERAGFKAIALT 96 (308)
Q Consensus 73 ~d~~~~~~~~~~~~~~g~~~i~i~ 96 (308)
.|.+.+.++++...+.|+++|.+.
T Consensus 44 ID~~~l~~lv~~li~~Gv~Gl~v~ 67 (344)
T 2hmc_A 44 PDFDALVRKGKELIADGMSAVVYC 67 (344)
T ss_dssp BCHHHHHHHHHHHHHTTCCCEEES
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeC
Confidence 477889999999889999998764
No 497
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=86.13 E-value=8.6 Score=34.20 Aligned_cols=90 Identities=23% Similarity=0.351 Sum_probs=59.2
Q ss_pred HHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEEEeccc-cc---C-CCCCcchHHHH----HHHHHHccCCCeEEEec
Q 021739 157 VKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHG-AR---Q-LDYVPATVMAL----EEVVQAAKGRVPVFLDG 227 (308)
Q Consensus 157 i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~v~~~g-g~---~-~~~~~~~~~~l----~~i~~~~~~~ipvia~G 227 (308)
++++++. +-|+.+-+..+.-.|+.+.++|+|+|.+++.+ +. . .|.++-+++.+ ..+.+.. ++||+++.
T Consensus 9 lr~l~~~-~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~--~~PviaD~ 85 (295)
T 1xg4_A 9 FRAALTK-ENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVC--SLPLLVDA 85 (295)
T ss_dssp HHHHHHH-SSSEEEEECSSHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHC--CSCEEEEC
T ss_pred HHHHHhC-CCcEEEecCcCHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhC--CCCEEecC
Confidence 4444432 56888888889999999999999999998752 11 1 12233344433 3334443 68999998
Q ss_pred --CCC-CHHHHH----HHHHcCCCEEEEc
Q 021739 228 --GVR-RGTDVF----KALALGASGVFVG 249 (308)
Q Consensus 228 --GI~-~~~d~~----k~l~~GAd~V~ig 249 (308)
|.. ++.++. +.++.||++|.|=
T Consensus 86 d~Gyg~~~~~~~~~v~~l~~aGa~gv~iE 114 (295)
T 1xg4_A 86 DIGFGSSAFNVARTVKSMIKAGAAGLHIE 114 (295)
T ss_dssp TTCSSSSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcccCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 544 565554 4556899999874
No 498
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=85.95 E-value=3.3 Score=37.36 Aligned_cols=68 Identities=21% Similarity=0.176 Sum_probs=47.9
Q ss_pred HHHHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEe---cCCCCHHHHHHHHHcCCCEEEEchHHH
Q 021739 177 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLD---GGVRRGTDVFKALALGASGVFVGRPVP 253 (308)
Q Consensus 177 e~a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~---GGI~~~~d~~k~l~~GAd~V~ig~~~l 253 (308)
+.++.+.++|||.|.+-+ .++.+.+.++.+.+ ++|+.++ +|-...-+..+.-++|...|..+...+
T Consensus 193 ~Ra~Ay~eAGAd~i~~e~---------~~~~e~~~~i~~~l--~~P~lan~~~~g~~~~~~~~eL~~lGv~~v~~~~~~~ 261 (318)
T 1zlp_A 193 RRANLYKEAGADATFVEA---------PANVDELKEVSAKT--KGLRIANMIEGGKTPLHTPEEFKEMGFHLIAHSLTAV 261 (318)
T ss_dssp HHHHHHHHTTCSEEEECC---------CCSHHHHHHHHHHS--CSEEEEEECTTSSSCCCCHHHHHHHTCCEEEECSHHH
T ss_pred HHHHHHHHcCCCEEEEcC---------CCCHHHHHHHHHhc--CCCEEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHH
Confidence 457888999999998742 34567778888877 6898543 332222234555579999999998877
Q ss_pred Hh
Q 021739 254 FS 255 (308)
Q Consensus 254 ~~ 255 (308)
.+
T Consensus 262 ra 263 (318)
T 1zlp_A 262 YA 263 (318)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 499
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=85.95 E-value=2.8 Score=37.08 Aligned_cols=35 Identities=26% Similarity=0.256 Sum_probs=27.1
Q ss_pred HHHHHHHHhcCCCEEEEecCCHHHHHHHHHcCCcEEE
Q 021739 155 KDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGII 191 (308)
Q Consensus 155 ~~i~~ir~~~~~Pv~vK~~~~~e~a~~~~~~G~d~i~ 191 (308)
..|+.+++. ++||++ ....++.++.+.++|++.|.
T Consensus 71 pvi~~l~~~-~~piSI-DT~~~~va~aAl~aGa~iIN 105 (280)
T 1eye_A 71 PVVKELAAQ-GITVSI-DTMRADVARAALQNGAQMVN 105 (280)
T ss_dssp HHHHHHHHT-TCCEEE-ECSCHHHHHHHHHTTCCEEE
T ss_pred HHHHHhhcC-CCEEEE-eCCCHHHHHHHHHcCCCEEE
Confidence 456777665 889887 55778899999999998774
No 500
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=85.95 E-value=10 Score=33.82 Aligned_cols=67 Identities=15% Similarity=0.083 Sum_probs=43.9
Q ss_pred HHHHHHcCCcEEEEecccccCCCCCcchHHHHHHHHHHccCCCeEEEe---cCCCCHHHHHHHHHcCCCEEEEchHHHHh
Q 021739 179 ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLD---GGVRRGTDVFKALALGASGVFVGRPVPFS 255 (308)
Q Consensus 179 a~~~~~~G~d~i~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~---GGI~~~~d~~k~l~~GAd~V~ig~~~l~~ 255 (308)
++...++|||.|-+.+ +.+.+.+.++.+.+. ..|+.++ +|-...-.+.+.-++|...|..+..++.+
T Consensus 176 a~ay~eAGAD~ifi~g---------~~~~~ei~~~~~~~~-~~Pl~~n~~~~g~~p~~~~~eL~~lGv~~v~~~~~~~ra 245 (302)
T 3fa4_A 176 LRAARDAGADVGFLEG---------ITSREMARQVIQDLA-GWPLLLNMVEHGATPSISAAEAKEMGFRIIIFPFAALGP 245 (302)
T ss_dssp HHHHHTTTCSEEEETT---------CCCHHHHHHHHHHTT-TSCEEEECCTTSSSCCCCHHHHHHHTCSEEEETTTTHHH
T ss_pred HHHHHHcCCCEEeecC---------CCCHHHHHHHHHHhc-CCceeEEEecCCCCCCCCHHHHHHcCCCEEEEchHHHHH
Confidence 5677899999997643 235667777777763 3677663 33221123444456899999999877764
Done!