BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021742
(308 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5U1Y0|TM192_RAT Transmembrane protein 192 OS=Rattus norvegicus GN=Tmem192 PE=2 SV=1
Length = 266
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 7/160 (4%)
Query: 79 VILLALTGIFQQYFVYQVQKIRLQGYYSFSQKLKHIVRLPFAITAYGTAAMLLVIVWR-- 136
VIL L +F++Y Y +K+R +GY + +H+ L I + G A+LL++ +
Sbjct: 101 VILWILHLLFERYIQYHHRKVRSRGYSQIYRSTRHLKALALTIHSSGNTALLLLLCVQYS 160
Query: 137 -PHISILSISTLLRIIMLIEAICAASFMSVYIGYVHQYNSLNSQPDVMKSLYSPLQPS-- 193
P + L + +L ++ L E IC+ S + +Y + ++N QPDV++ PS
Sbjct: 161 FPEPNKLYLELILAVLAL-ELICSLSCLVLYTVKIRRFNKAKPQPDVLEEEKCYAYPSNI 219
Query: 194 SSLEGLRYHDG-GRLSDEQMALLQYQRENLHFLSEEILRL 232
+S G R + ++Q ++ Y + + LS+ +L L
Sbjct: 220 ASETGFRTVSSLEEIVEKQGDIIVYLKRHNALLSKRLLEL 259
>sp|Q6NYE7|TM192_DANRE Transmembrane protein 192 OS=Danio rerio GN=tmem192 PE=2 SV=1
Length = 271
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 20/170 (11%)
Query: 79 VILLALTGIFQQYFVYQ--VQK----IRLQGYYSFSQKLKHIVRLPFAITAYGTAAMLLV 132
V+LL ++ F+Y VQ+ +R +GY F + K I LP I + G AA+L V
Sbjct: 99 VVLLGKVALWVVVFIYDRVVQRRHSAVRRKGYLDFYRMTKGIKSLPLLIHSAGNAAILTV 158
Query: 133 I----VWRPHISILSISTLLRII---MLIEAICAASFMSVYIGYVHQYNSLNSQPDVMKS 185
I + ++ LS+ LL II +L+ IC + Y +V ++N PDV +
Sbjct: 159 IAPSSLLDANVKNLSVYLLLAIICLELLLTIIC----LLRYTVHVVKFNRKKPHPDVTEE 214
Query: 186 LYSPLQPSSSLEGLRYHDGGRLSD---EQMALLQYQRENLHFLSEEILRL 232
S S + + DG L D +Q L+ Y +++ LS IL L
Sbjct: 215 ERSYGCSSDAHTETGFRDGSSLEDVVEKQADLIDYLKQHNSVLSRRILTL 264
>sp|Q9CXT7|TM192_MOUSE Transmembrane protein 192 OS=Mus musculus GN=Tmem192 PE=1 SV=1
Length = 266
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 82/160 (51%), Gaps = 7/160 (4%)
Query: 79 VILLALTGIFQQYFVYQVQKIRLQGYYSFSQKLKHIVRLPFAITAYGTAAMLLVIVWR-- 136
+IL L +F++Y Y +K+R +GY + +H+ L I + G A+LL++ +
Sbjct: 101 LILWILHLLFERYVQYHHRKVRSRGYSQIYRSTRHLKTLALTIHSSGNTALLLLLCVQHS 160
Query: 137 -PHISILSISTLLRIIMLIEAICAASFMSVYIGYVHQYNSLNSQPDVM--KSLYSPLQPS 193
P S L + +L ++ L E IC+ S + +YI + ++N PDV+ + +Y+ +
Sbjct: 161 FPEPSKLYLELILAVLAL-ELICSLSCLILYIVKIRRFNRAKPLPDVLEEEKIYAYPSNT 219
Query: 194 SSLEGLRYHDG-GRLSDEQMALLQYQRENLHFLSEEILRL 232
+S G R + ++Q ++ Y + + LS+ +L L
Sbjct: 220 ASETGFRTVSSLEEIVEKQEDIIVYLKRHNALLSKRLLEL 259
>sp|C5E2E7|MPS2_LACTC Monopolar spindle protein 2 OS=Lachancea thermotolerans (strain
ATCC 56472 / CBS 6340 / NRRL Y-8284) GN=MPS2 PE=3 SV=1
Length = 386
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 15/102 (14%)
Query: 206 RLSDEQ-MALLQYQRENLHFLSEEILRLQECL----SKYEQSDDGSTPQVDLAHLLAARD 260
RL D Q + +Q ++ + H L EE++RL+E + SK ++ D T + ++ L +D
Sbjct: 107 RLQDSQAVDGIQDEKTSSHALQEEVMRLREQVRVLSSKNDEKDREITARDEIIADLQGKD 166
Query: 261 ----------QELRTLSAEMNQLQSELRLARSFVAEREAEVL 292
Q +RTL A + L+ EL + E++ E+L
Sbjct: 167 ASPAGSPRSLQRMRTLQARVTSLEDELSFRDEVIREKDRELL 208
>sp|Q92351|PCP1_SCHPO Spindle pole body protein pcp1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=pcp1 PE=1 SV=1
Length = 1208
Score = 36.2 bits (82), Expect = 0.35, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 218 QRENLHFLSEEILRLQECLSKYEQSDDGSTPQV--DLAHLLAARDQELRTLSAEMNQLQS 275
Q +N+ +E I L+ L K ++ D + ++ D ++ + E+R L +++L
Sbjct: 240 QSQNVKVFTERIRFLENALEKVQREKDSLSTEMEEDKSNKEVDYEYEIRQLQNRLDELSE 299
Query: 276 ELRLARSFVAEREAEVLRV-RNTNNQVFSSSIF 307
EL +A+ + E+E E+ + R + SSS F
Sbjct: 300 ELDVAQDLLTEKEDEIATLKRQIEEKENSSSAF 332
>sp|Q8IY95|TM192_HUMAN Transmembrane protein 192 OS=Homo sapiens GN=TMEM192 PE=1 SV=1
Length = 271
Score = 35.4 bits (80), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 8/173 (4%)
Query: 79 VILLALTGIFQQYFVYQVQKIRLQGYYSFSQKLKHIVRLPFAITAYGTAAMLLVIVWR-- 136
VIL L + + Y Y KIR +GY + +H+ RL I + G +LL++ +
Sbjct: 101 VILWILHLLLECYIQYHHSKIRNRGYNLIYRSTRHLKRLALMIQSSGNTVLLLILCMQHS 160
Query: 137 -PHISILSISTLLRIIMLIEAICAASFMSVYIGYVHQYNSLNSQPDVMKSLYSPLQPSSS 195
P L L+ I+ +E IC+ + +Y + ++N +PD+++ PS+
Sbjct: 161 FPEPGRL-YLDLILAILALELICSLICLLIYTVKIRRFNKAKPEPDILEEEKIYAYPSN- 218
Query: 196 LEGLRYHDGGRLSDEQMALLQYQRENLHFLSEEILRLQECLSKYEQSDDGSTP 248
+ G R +++ Q + + +L L + L SD G P
Sbjct: 219 ---ITSETGFRTISSLEEIVEKQGDTIEYLKRHNALLSKRLLALTSSDLGCQP 268
>sp|Q5RCG1|TM192_PONAB Transmembrane protein 192 OS=Pongo abelii GN=TMEM192 PE=2 SV=2
Length = 271
Score = 35.4 bits (80), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 8/173 (4%)
Query: 79 VILLALTGIFQQYFVYQVQKIRLQGYYSFSQKLKHIVRLPFAITAYGTAAMLLVIVWR-- 136
VIL L + + Y Y KIR +GY + +H+ RL I + G +LL++ +
Sbjct: 101 VILWILHLLLECYIQYHHSKIRNRGYNLIYRSTRHLKRLALMIRSSGNTVLLLILCMQHS 160
Query: 137 -PHISILSISTLLRIIMLIEAICAASFMSVYIGYVHQYNSLNSQPDVMKSLYSPLQPSSS 195
P L L+ I+ +E IC+ + +Y + ++N +PD+++ PS+
Sbjct: 161 FPEPGRL-YLDLILAILALELICSLICLLIYTVKIRRFNKAKPEPDILEEEKIYAYPSN- 218
Query: 196 LEGLRYHDGGRLSDEQMALLQYQRENLHFLSEEILRLQECLSKYEQSDDGSTP 248
+ G R +++ Q + + +L L + L SD G P
Sbjct: 219 ---ITSETGFRTISSLEEIVEKQGDTIEYLKRHNALLSKRLLALTSSDLGCQP 268
>sp|P12270|TPR_HUMAN Nucleoprotein TPR OS=Homo sapiens GN=TPR PE=1 SV=3
Length = 2363
Score = 33.5 bits (75), Expect = 2.3, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 223 HFLSEEILRLQECLSKYEQSDDGSTPQVD-LAHLLAARDQELRTLSAEMNQLQSELRLAR 281
H +E+ L+E L++ E QV+ L L+ ++ E R L + QLQSEL R
Sbjct: 1470 HVSVQEMQELKETLNQAETKSKSLESQVENLQKTLSEKETEARNLQEQTVQLQSELSRLR 1529
Query: 282 SFVAEREAEVLRVR 295
+ +R + ++R
Sbjct: 1530 QDLQDRTTQEEQLR 1543
>sp|P47460|HMW2_MYCGE Cytadherence high molecular weight protein 2 OS=Mycoplasma genitalium
(strain ATCC 33530 / G-37 / NCTC 10195) GN=hmw2 PE=3 SV=1
Length = 1805
Score = 33.1 bits (74), Expect = 2.4, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 206 RLSDEQMALLQYQRENLHFLSEEILR----LQECLSKYEQSDDGSTPQVDLAHLLAARDQ 261
R+ D++ LL+ NLHFLS E R L++ +S +E+ +T + +H +
Sbjct: 1301 RIVDDKNRLLKENERNLHFLSNETERKRAVLEDQISYFEKQRKQATDAILASH------K 1354
Query: 262 ELRTLSAEMNQLQSELRLARSFVAEREAEVLRVR 295
E++ E+ +L EL ++ + A+ R R
Sbjct: 1355 EVKKKEGELQKLLVELETRKTKLNNDFAKFSRQR 1388
>sp|O76329|ACTNB_DICDI Interaptin OS=Dictyostelium discoideum GN=abpD PE=1 SV=1
Length = 1738
Score = 33.1 bits (74), Expect = 2.8, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 209 DEQMALLQYQ-RENLHFLSEEILRLQECLSKYEQSDDGSTPQVDLAHLLAARDQELRTLS 267
DE++ +Q++ +E LSE+ +LQ Q +D + +V + +D++L+++
Sbjct: 1238 DEKLQSIQFENQEKEKQLSEKDEKLQSIQQNLNQLNDENQEKVKQ---FSEKDEKLQSIQ 1294
Query: 268 AEMNQLQSELRLARSFVAEREAEVLRVRNTNNQVFSSSI 306
++NQL+ E + ++E++ ++ ++ NQ+ I
Sbjct: 1295 QDLNQLKQENQEKEKQLSEKDEKLQSIQQDLNQLNDDQI 1333
>sp|Q21691|NRDE3_CAEEL Nuclear RNAi defective-3 protein OS=Caenorhabditis elegans
GN=nrde-3 PE=1 SV=1
Length = 1057
Score = 32.7 bits (73), Expect = 3.5, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 56/131 (42%), Gaps = 17/131 (12%)
Query: 176 LNSQPDVMKSLYSPLQPSSSLEGLRYHDGGRLSDEQMALLQYQRENLHFLSEEILRLQEC 235
+ P V+ YS L+ S+ L G Y +Q LH L+ ++Q C
Sbjct: 789 FDGDPTVVGVAYS-LKHSAQLGGFSY---------------FQESRLHKLTNLQEKMQIC 832
Query: 236 LSKYEQSDDGSTPQVDLAHLLAARDQELRTLSAEMNQLQSELRLARSFVAEREAEVLRVR 295
L+ YEQS P+ + + + + + + + E+N+++ R + + + R
Sbjct: 833 LNAYEQSSS-YLPETVVVYRVGSGEGDYPQIVNEVNEMKLAARKKKHGYNPKFLVICTQR 891
Query: 296 NTNNQVFSSSI 306
N++ +VF I
Sbjct: 892 NSHIRVFPEHI 902
>sp|Q9HD67|MYO10_HUMAN Unconventional myosin-X OS=Homo sapiens GN=MYO10 PE=1 SV=3
Length = 2058
Score = 32.0 bits (71), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 215 LQYQRENLHFLSEEILRLQ---ECLSKYEQSDDGSTPQVDLAHLLAARDQELRTLSAE 269
L+ Q+EN EEILRL+ E L + ++ + S + L L RDQELR L E
Sbjct: 878 LEKQKENKQV--EEILRLEKEIEDLQRMKEQQELSLTEASLQKLQERRDQELRRLEEE 933
>sp|Q54G05|LRRX1_DICDI Putative leucine-rich repeat-containing protein DDB_G0290503
OS=Dictyostelium discoideum GN=DDB_G0290503 PE=4 SV=1
Length = 1492
Score = 32.0 bits (71), Expect = 6.2, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 12/76 (15%)
Query: 225 LSEEILRLQECLSKYEQSDDGSTPQVDL----------AHL-LAARDQELRTLSAE-MNQ 272
LSE+ L E ++ Y++S + Q DL AHL + +D E+ +LS E N+
Sbjct: 1173 LSEKEQELNEMINDYDESLNEINDQKDLVKSLNERLTNAHLKINEKDNEIHSLSKEGFNE 1232
Query: 273 LQSELRLARSFVAERE 288
+QS+L L + ++E++
Sbjct: 1233 IQSQLNLITNQLSEKD 1248
>sp|Q1L8T5|CING_DANRE Cingulin OS=Danio rerio GN=cgn PE=2 SV=1
Length = 1161
Score = 32.0 bits (71), Expect = 6.2, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 202 HDGGRLSDEQMALLQYQRENLHFLSEEILRL-QECLSKYEQSDDGSTPQVDLAHLLAARD 260
D RLS +++ LQ + L EE+ R+ +E LS E+ D + L+ L +
Sbjct: 850 QDAQRLSKDRLVELQRAQALLKTTQEEVSRVKKELLSCTEERDSTQLDKELLSSRLKNME 909
Query: 261 QELRTLSAEMNQLQSELRLARSFVAEREAEV 291
EL+T + E+RL V E E+
Sbjct: 910 TELQTDRSSQTDRSREIRLLEDKVKTLEIEL 940
>sp|Q4WY31|ATG11_ASPFU Autophagy-related protein 11 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=atg11
PE=3 SV=1
Length = 1264
Score = 32.0 bits (71), Expect = 6.3, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 15/138 (10%)
Query: 169 YVHQYNSLNSQPDVMKSLYSPLQPSSSLEGLRYHDGGRLSDEQMALLQYQRENLHFLSEE 228
++H L+ D+++ + + SL+ L +Q + ++ENL L
Sbjct: 681 HIHTEEELHRANDLLEQMQAQKMTEESLQ----QRINELEKQQSEIKATEQENLQTLQAA 736
Query: 229 ILRLQ----------ECLSKYEQSDDGSTPQVDLAH-LLAARDQELRTLSAEMNQLQSEL 277
+ L + E +G + V A +A E + L MNQL++E+
Sbjct: 737 FMNLSPGGAVPAEIPSIIKAIEVLSEGLSIHVKNAEEKMAEAVAENKALEERMNQLETEV 796
Query: 278 RLARSFVAEREAEVLRVR 295
+ A+ +RE+E+ +VR
Sbjct: 797 QDAKQSAEQRESELAQVR 814
>sp|Q9JKY5|HIP1R_MOUSE Huntingtin-interacting protein 1-related protein OS=Mus musculus
GN=Hip1r PE=1 SV=2
Length = 1068
Score = 32.0 bits (71), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 209 DEQMALLQYQRENLHFLSEEILRLQECLSKYEQSDDGSTPQVDLAHLLAARDQELRTLSA 268
+EQ L+ + L + E+ R QE LS+ EQS GS +L+ L + E LS
Sbjct: 508 EEQSDQLEKLKRELAARAGELARAQEALSRTEQS--GS----ELSSRLDTLNAEKEALSG 561
Query: 269 EMNQLQSELRLARSFVAERE 288
+ Q ++EL A+S V E+E
Sbjct: 562 VVRQREAELLAAQSLVREKE 581
>sp|E6ZHJ8|FXL15_DICLA F-box/LRR-repeat protein 15 OS=Dicentrarchus labrax GN=fbxl15 PE=3
SV=1
Length = 292
Score = 31.6 bits (70), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
Query: 193 SSSLEGLRYHDGGRLSDEQMALLQYQRENLHFLSEEILRLQ------------ECLSKYE 240
S SL L H GG S + A Q + + + +L+++ L+L+ E + +
Sbjct: 148 SLSLRSLADHCGGLQSIDLTACRQLKDDAICYLAKKCLKLRSLSLAVNANITDESVEEVA 207
Query: 241 QSDDGSTPQVDLAHLLAARDQELRTLSAEMNQLQSELRLARSF-VAEREAEVLRVRNT 297
++ G Q+DL L R+Q +RTL+ +LQS L++ V E + LR RN
Sbjct: 208 KNCRG-LEQLDLTGCLRVRNQSIRTLAEYCPKLQS-LKVNHCHNVTESSLDPLRKRNV 263
>sp|Q4G0X9|CCD40_HUMAN Coiled-coil domain-containing protein 40 OS=Homo sapiens GN=CCDC40
PE=2 SV=2
Length = 1142
Score = 31.2 bits (69), Expect = 9.3, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 19/105 (18%)
Query: 209 DEQMALLQYQRENLHFLSEEILRLQECLSKYEQSDDGSTPQVDLAHLLAARDQELRTLSA 268
+EQ+A L ++ LH + ++ LR++ SK EQ Q ++ H + D +L+ L+
Sbjct: 792 EEQLASLDASKKELHIMEQKKLRVE---SKIEQE---KKEQKEIEHHMKDLDNDLKKLNM 845
Query: 269 EMNQLQ------------SELRLARSFVAEREAEVLRVRNTNNQV 301
MN+ + +E RS A E E +++++ NQ+
Sbjct: 846 LMNKNRCSSEELEQNNRVTENEFVRSLKAS-ERETIKMQDKLNQL 889
>sp|D3ZJP6|MYO10_RAT Unconventional myosin-X OS=Rattus norvegicus GN=Myo10 PE=1 SV=1
Length = 2060
Score = 31.2 bits (69), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 215 LQYQRENLHFLSEEILRLQ---ECLSKYEQSDDGSTPQVDLAHLLAARDQELRTLSAE 269
L+ QREN EEILRL+ E L + ++ + S + L L RD+ELR L E
Sbjct: 877 LEKQRENKQV--EEILRLEKEIEDLQRMKEQQELSLTEASLQKLQQLRDEELRRLEDE 932
>sp|Q9D180|WDR65_MOUSE WD repeat-containing protein 65 OS=Mus musculus GN=Wdr65 PE=2 SV=3
Length = 1249
Score = 31.2 bits (69), Expect = 9.5, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
Query: 176 LNSQPDVMKSLYSPLQPSSSLEGLRYHDGGRLSDEQMAL---LQYQRENLHFLSEEILRL 232
L + +M+ +S LQ +E R +D L EQM L ++ +++ L EI
Sbjct: 891 LKGETGIMRKKFSSLQ--KEIEE-RTNDIELLKSEQMKLQGIIRSLEKDIQGLKREIQER 947
Query: 233 QECLSKYEQS-DDGSTPQVDLAHLLAARDQELRTLSAEMNQLQSELRLARSFVAEREAEV 291
E + E+ D +L D +++ L ++ ++E+++ + + E EAE+
Sbjct: 948 DETIQDKEKRIYDLKKKNQELEKFKFVLDYKIKELKKQIEPRENEIKVMKEQIQEMEAEL 1007
Query: 292 LRVRNTNNQV 301
R N Q+
Sbjct: 1008 ERFHKQNTQL 1017
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.135 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,974,349
Number of Sequences: 539616
Number of extensions: 3875960
Number of successful extensions: 14578
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 14540
Number of HSP's gapped (non-prelim): 76
length of query: 308
length of database: 191,569,459
effective HSP length: 117
effective length of query: 191
effective length of database: 128,434,387
effective search space: 24530967917
effective search space used: 24530967917
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)