Query 021743
Match_columns 308
No_of_seqs 265 out of 2235
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 08:39:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021743.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021743hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zs7_A Pyridoxal kinase; trans 100.0 1.3E-50 4.5E-55 366.6 27.7 286 14-307 3-299 (300)
2 3pzs_A PM kinase, pyridoxamine 100.0 5.2E-49 1.8E-53 354.7 28.7 276 12-307 2-289 (289)
3 3mbh_A Putative phosphomethylp 100.0 2.8E-42 9.6E-47 310.9 24.6 246 12-270 5-261 (291)
4 3h74_A Pyridoxal kinase; PSI-I 100.0 7.7E-42 2.6E-46 306.6 22.6 242 14-271 3-252 (282)
5 2yxt_A Pyridoxal kinase; beta 100.0 1.1E-36 3.8E-41 276.9 32.1 292 12-307 2-312 (312)
6 3rm5_A Hydroxymethylpyrimidine 100.0 6.9E-37 2.4E-41 297.6 23.4 258 2-274 10-282 (550)
7 2ddm_A Pyridoxine kinase; pyri 100.0 2.2E-34 7.5E-39 258.2 29.2 247 14-271 15-270 (283)
8 2i5b_A Phosphomethylpyrimidine 100.0 2.4E-32 8.1E-37 243.4 25.0 247 13-276 2-258 (271)
9 1ub0_A THID, phosphomethylpyri 100.0 6E-32 2E-36 239.1 23.7 238 14-271 1-247 (258)
10 1jxh_A Phosphomethylpyrimidine 100.0 1.6E-30 5.6E-35 233.8 24.0 243 7-269 18-270 (288)
11 3umo_A 6-phosphofructokinase i 99.9 9.5E-22 3.2E-26 177.9 19.7 173 65-266 111-288 (309)
12 2abq_A Fructose 1-phosphate ki 99.9 1.5E-21 5.1E-26 176.4 19.3 176 64-268 105-283 (306)
13 2jg5_A Fructose 1-phosphate ki 99.9 1.6E-21 5.4E-26 176.1 18.3 173 65-266 106-281 (306)
14 3ktn_A Carbohydrate kinase, PF 99.9 1.5E-21 5E-26 179.5 16.0 165 86-266 129-312 (346)
15 2jg1_A Tagatose-6-phosphate ki 99.9 1.8E-21 6.3E-26 177.8 16.6 173 66-266 128-306 (330)
16 3cqd_A 6-phosphofructokinase i 99.9 2.8E-21 9.6E-26 174.8 17.6 174 66-267 112-289 (309)
17 2f02_A Tagatose-6-phosphate ki 99.9 1.8E-21 6.2E-26 177.3 15.8 174 66-267 110-290 (323)
18 4du5_A PFKB; structural genomi 99.9 2.3E-21 7.8E-26 177.7 16.5 161 87-268 153-319 (336)
19 1rkd_A Ribokinase; carbohydrat 99.9 3.9E-21 1.3E-25 173.8 17.8 168 66-266 119-287 (309)
20 3lhx_A Ketodeoxygluconokinase; 99.9 1.9E-21 6.4E-26 176.9 14.8 171 70-266 118-298 (319)
21 2fv7_A Ribokinase; structural 99.9 3E-21 1E-25 176.4 16.3 169 66-266 139-312 (331)
22 3iq0_A Putative ribokinase II; 99.9 1.5E-21 5.2E-26 178.3 14.0 159 87-266 131-292 (330)
23 4e69_A 2-dehydro-3-deoxyglucon 99.9 5E-21 1.7E-25 174.8 16.6 160 86-266 145-311 (328)
24 2qhp_A Fructokinase; NP_810670 99.9 2E-21 6.7E-26 174.7 13.5 161 86-266 114-279 (296)
25 3ry7_A Ribokinase; transferase 99.9 4.2E-21 1.4E-25 173.2 15.6 168 66-266 118-287 (304)
26 2afb_A 2-keto-3-deoxygluconate 99.9 6.7E-21 2.3E-25 175.4 16.9 164 87-266 139-324 (351)
27 3ie7_A LIN2199 protein; phosph 99.9 4.3E-21 1.5E-25 174.4 14.5 171 64-266 112-285 (320)
28 3kzh_A Probable sugar kinase; 99.9 1.3E-20 4.5E-25 172.0 17.7 166 67-266 122-289 (328)
29 2qcv_A Putative 5-dehydro-2-de 99.8 1.2E-20 4E-25 172.4 14.0 164 87-267 139-306 (332)
30 3vas_A Putative adenosine kina 99.8 1.5E-20 5.2E-25 174.5 13.5 176 66-266 161-352 (370)
31 4e84_A D-beta-D-heptose 7-phos 99.8 7.2E-20 2.5E-24 168.8 16.7 150 86-266 186-338 (352)
32 3ljs_A Fructokinase; fructokia 99.8 3E-21 1E-25 176.8 7.3 162 87-267 130-309 (338)
33 2ajr_A Sugar kinase, PFKB fami 99.8 1.8E-20 6.2E-25 171.3 11.9 173 65-266 126-306 (331)
34 3pl2_A Sugar kinase, ribokinas 99.8 1.4E-19 4.8E-24 164.3 16.3 158 87-266 136-297 (319)
35 1tyy_A Putative sugar kinase; 99.8 1.6E-20 5.6E-25 172.2 9.6 160 86-266 141-309 (339)
36 3otx_A Adenosine kinase, putat 99.8 3.6E-20 1.2E-24 170.3 11.5 161 87-267 163-334 (347)
37 1v1a_A 2-keto-3-deoxygluconate 99.8 1.4E-19 4.8E-24 163.6 15.2 155 86-266 125-283 (309)
38 3loo_A Anopheles gambiae adeno 99.8 4.9E-20 1.7E-24 170.7 12.3 162 87-268 177-351 (365)
39 2r3b_A YJEF-related protein; p 99.8 1.5E-19 5.2E-24 163.2 15.0 215 9-268 39-268 (310)
40 3hj6_A Fructokinase, FRK; fruc 99.8 7.1E-21 2.4E-25 173.7 5.3 160 87-267 145-308 (327)
41 1bx4_A Protein (adenosine kina 99.8 3.7E-20 1.3E-24 170.0 9.9 160 87-266 162-332 (345)
42 3bgk_A SMU.573, putative uncha 99.8 1.7E-19 5.9E-24 162.9 13.1 220 7-268 51-285 (311)
43 1vm7_A Ribokinase; TM0960, str 99.8 7.2E-20 2.5E-24 165.9 10.2 149 87-266 141-290 (311)
44 2nwh_A AGR_C_3442P, carbohydra 99.8 2.4E-19 8.1E-24 162.9 13.2 151 87-266 135-287 (317)
45 4e3a_A Sugar kinase protein; s 99.8 2E-19 6.7E-24 165.9 11.8 155 87-266 172-332 (352)
46 3h49_A Ribokinase; transferase 99.8 9.3E-19 3.2E-23 159.4 15.8 155 87-266 136-294 (325)
47 2abs_A Adenosine kinase, AK; r 99.8 2.1E-19 7.2E-24 167.4 11.6 166 86-266 180-370 (383)
48 2rbc_A Sugar kinase, AGR_C_456 99.8 7.7E-19 2.6E-23 161.3 14.8 146 87-266 158-308 (343)
49 2v78_A Fructokinase; transfera 99.8 5.3E-19 1.8E-23 160.1 12.8 155 87-266 129-290 (313)
50 2dcn_A Hypothetical fructokina 99.8 6.1E-19 2.1E-23 159.5 11.5 154 87-266 129-288 (311)
51 3kd6_A Carbohydrate kinase, PF 99.8 3.6E-19 1.2E-23 161.4 9.2 151 86-266 119-276 (313)
52 3uq6_A Adenosine kinase, putat 99.8 3.3E-18 1.1E-22 158.8 13.7 162 87-266 181-354 (372)
53 1ekq_A Hydroxyethylthiazole ki 99.8 1.3E-17 4.4E-22 148.3 16.8 162 87-270 59-234 (272)
54 3ikh_A Carbohydrate kinase; tr 99.7 4E-18 1.4E-22 153.5 10.7 135 86-266 131-268 (299)
55 2c4e_A Sugar kinase MJ0406; tr 99.7 5.6E-18 1.9E-22 152.7 11.2 147 87-266 131-279 (302)
56 2pkf_A Adenosine kinase; trans 99.7 1.2E-17 4.1E-22 152.8 13.2 148 87-266 149-299 (334)
57 3b1n_A Ribokinase, putative; r 99.7 1.6E-17 5.4E-22 151.5 11.8 149 86-266 135-285 (326)
58 3ewm_A Uncharacterized sugar k 99.7 2.3E-17 7.9E-22 149.4 12.5 150 87-266 125-281 (313)
59 4gm6_A PFKB family carbohydrat 99.7 4.3E-17 1.5E-21 149.8 13.2 165 87-266 151-325 (351)
60 1vk4_A PFKB carbohydrate kinas 99.7 2.9E-17 1E-21 147.8 9.9 158 86-267 119-280 (298)
61 1v8a_A Hydroxyethylthiazole ki 99.7 8.5E-17 2.9E-21 142.4 12.5 163 87-271 57-231 (265)
62 3go6_A Ribokinase RBSK; phosph 99.7 7.1E-17 2.4E-21 146.2 10.2 138 86-266 143-284 (310)
63 3dzv_A 4-methyl-5-(beta-hydrox 99.7 2.5E-15 8.4E-20 132.8 18.8 164 87-271 59-240 (273)
64 2hlz_A Ketohexokinase; non-pro 99.7 8.5E-16 2.9E-20 139.1 14.0 149 86-266 146-304 (312)
65 3rss_A Putative uncharacterize 99.6 1.2E-15 4E-20 146.0 12.8 222 8-265 238-473 (502)
66 3rpz_A ADP/ATP-dependent NAD(P 99.6 1E-15 3.5E-20 136.0 11.6 223 8-267 24-251 (279)
67 3bf5_A Ribokinase related prot 99.6 9.6E-16 3.3E-20 138.5 6.4 140 86-267 140-279 (306)
68 3hpd_A Hydroxyethylthiazole ki 99.4 5.4E-12 1.8E-16 110.7 14.4 162 87-270 57-230 (265)
69 3nl6_A Thiamine biosynthetic b 99.4 1.1E-11 3.7E-16 119.5 16.8 169 87-270 307-505 (540)
70 3k5w_A Carbohydrate kinase; 11 99.3 1.1E-11 3.9E-16 117.5 12.0 205 9-265 231-445 (475)
71 3drw_A ADP-specific phosphofru 96.3 0.062 2.1E-06 50.4 13.6 110 70-191 224-356 (474)
72 1ua4_A Glucokinase, ADP-depend 85.1 3.6 0.00012 38.4 9.0 109 70-191 213-341 (455)
73 1gc5_A ADP-dependent glucokina 84.6 5.7 0.0002 37.1 10.1 109 70-189 221-349 (467)
74 1l2l_A ADP-dependent glucokina 82.0 29 0.001 32.2 13.7 107 70-189 216-342 (457)
75 3ezx_A MMCP 1, monomethylamine 61.3 67 0.0023 26.3 11.6 118 12-164 90-211 (215)
76 2i2x_B MTAC, methyltransferase 58.8 55 0.0019 27.6 9.2 117 12-164 121-238 (258)
77 2yxb_A Coenzyme B12-dependent 55.0 72 0.0025 24.7 9.4 87 13-122 17-105 (161)
78 1zco_A 2-dehydro-3-deoxyphosph 54.9 98 0.0033 26.2 10.5 107 69-193 36-165 (262)
79 1y80_A Predicted cobalamin bin 54.4 74 0.0025 25.6 9.1 116 13-164 87-205 (210)
80 3bul_A Methionine synthase; tr 50.0 1.8E+02 0.0061 27.8 13.0 122 13-165 97-220 (579)
81 1vli_A Spore coat polysacchari 50.0 95 0.0033 28.0 9.6 78 102-193 101-192 (385)
82 3nvt_A 3-deoxy-D-arabino-heptu 44.1 1.6E+02 0.0056 26.4 10.3 108 68-193 154-284 (385)
83 3rzi_A Probable 3-deoxy-D-arab 43.1 62 0.0021 29.8 7.1 63 64-127 308-370 (462)
84 1vr6_A Phospho-2-dehydro-3-deo 43.1 1.8E+02 0.0061 25.8 10.2 107 68-192 118-247 (350)
85 2wqp_A Polysialic acid capsule 39.6 2E+02 0.0069 25.5 11.4 76 102-191 91-180 (349)
86 1ccw_A Protein (glutamate muta 37.3 1.3E+02 0.0043 22.5 9.3 64 37-122 26-90 (137)
87 1to3_A Putative aldolase YIHT; 35.5 2.2E+02 0.0074 24.6 9.8 99 87-195 122-231 (304)
88 3cra_A Protein MAZG; tandem-re 35.3 93 0.0032 26.6 6.7 56 230-286 195-251 (265)
89 1vs1_A 3-deoxy-7-phosphoheptul 35.1 2.1E+02 0.0072 24.4 10.2 108 68-193 50-180 (276)
90 2fds_A Orotidine-monophosphate 31.2 1.9E+02 0.0066 25.7 8.4 40 87-128 119-162 (352)
91 1gc5_A ADP-dependent glucokina 30.6 21 0.00071 33.3 2.0 21 225-245 443-464 (467)
92 1qwg_A PSL synthase;, (2R)-pho 30.5 1.1E+02 0.0038 25.8 6.3 54 62-121 18-72 (251)
93 1l2l_A ADP-dependent glucokina 29.2 22 0.00076 33.1 1.9 20 225-244 435-455 (457)
94 1ua4_A Glucokinase, ADP-depend 29.0 25 0.00086 32.7 2.3 21 225-245 432-453 (455)
95 3g8r_A Probable spore coat pol 28.6 2.7E+02 0.0091 24.7 8.8 24 169-192 145-168 (350)
96 3l52_A Orotidine 5'-phosphate 28.5 2.3E+02 0.0079 24.3 8.2 64 86-157 62-134 (284)
97 3iwp_A Copper homeostasis prot 28.1 2.9E+02 0.0098 23.8 9.2 58 66-127 104-163 (287)
98 1u83_A Phosphosulfolactate syn 27.6 86 0.003 26.9 5.2 58 58-122 41-98 (276)
99 2ffc_A Orotidine 5-monophospha 26.9 2.2E+02 0.0074 25.3 7.9 40 87-128 129-172 (353)
100 1ztd_A Hypothetical protein PF 25.7 60 0.002 23.7 3.2 31 226-256 64-94 (133)
101 3n3m_A Orotidine 5'-phosphate 25.3 3.1E+02 0.011 24.2 8.6 41 86-128 116-160 (342)
102 3eww_A Ompdecase, orotidine-5' 23.8 1.7E+02 0.0059 24.7 6.5 55 68-128 42-97 (260)
103 1xrs_B D-lysine 5,6-aminomutas 22.8 1.7E+02 0.0057 24.9 6.2 45 64-114 164-210 (262)
104 3r89_A Orotidine 5'-phosphate 22.7 2.7E+02 0.0092 23.9 7.6 63 87-157 60-129 (290)
105 3pzt_A Endoglucanase; alpha/be 22.7 1.3E+02 0.0044 26.2 5.6 53 66-126 68-127 (327)
106 3vk5_A MOEO5; TIM barrel, tran 22.1 1.7E+02 0.0057 25.3 6.0 49 70-124 53-104 (286)
107 4eys_A MCCC family protein; MC 21.7 1.5E+02 0.0053 26.1 6.0 57 69-127 260-317 (346)
108 3hv2_A Response regulator/HD d 21.6 2.3E+02 0.008 20.4 7.3 32 87-122 59-91 (153)
109 2vpt_A Lipolytic enzyme; ester 20.7 3E+02 0.01 21.4 7.5 22 101-122 104-125 (215)
110 3g3d_A UMP synthase, uridine 5 20.5 2.1E+02 0.0073 24.9 6.5 55 68-128 94-149 (312)
111 3dci_A Arylesterase; SGNH_hydr 20.5 3.2E+02 0.011 21.6 9.4 21 9-29 18-38 (232)
No 1
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=100.00 E-value=1.3e-50 Score=366.61 Aligned_cols=286 Identities=36% Similarity=0.625 Sum_probs=235.0
Q ss_pred CCeEEEEeccCccCccchhhcHHHHHhcCCcceeeceEEeccCCCCCCceeeeCCHHHHHHHHHHHHhCCC-cccCEEEE
Q 021743 14 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNL-LYYTHLLT 92 (308)
Q Consensus 14 ~~~Vl~i~~~~~~G~~G~~a~~~~l~~~Gi~~~~v~t~~~~~~tg~~~~~g~~~~~~~~~~~l~~l~~~~~-~~~~~v~~ 92 (308)
.++||+|+|++++|++|+.+++++|+.+|+++++++|+++||||||..+.+.+++.++++.++++|..... ..+|+|++
T Consensus 3 ~~~VLsI~~~~~~G~~G~~aa~~~l~~~G~~v~~~~T~~~Snhtg~~~~~g~~~~~~ql~~~~~~~~~~~~~~~~daV~t 82 (300)
T 3zs7_A 3 EKTVLSIQSFVTHGYVGNKAATFPLQLHGFDVDGINTVCLSNHSGYPVIRGHRMSLQEYDELMEGVRANNFLSNYRYILT 82 (300)
T ss_dssp CCEEEEEEEEESSSSCHHHHHHHHHHHTTCEEEEEEEEEESSCTTSSCCCEEECCHHHHHHHHHHHHHTTCGGGCSEEEE
T ss_pred CCeEEEEeCccCCCcchHHHHHHHHHHcCCeeEEeeeEEecCCCCCCCcCCCcCCHHHHHHHHHHHHhcCCcccCCEEEE
Confidence 47899999999999999999999999999999999999999999999888999998999999999998653 24899999
Q ss_pred eccCCHhHHHHHHHHHHHHHhcCCC----ceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhhCCCC
Q 021743 93 GYIGSVSFLNTILQVVEKLRSINPN----LIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRI 168 (308)
Q Consensus 93 G~l~~~~~~~~~~~~l~~~k~~~~~----~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~ 168 (308)
||+++.++++.+.++++.+|+++|+ +++||||||+++|++|.+++..+.+++ +++.+|+||||.+|++.|+|.++
T Consensus 83 G~l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~~-Ll~~adiitPN~~Ea~~L~g~~~ 161 (300)
T 3zs7_A 83 GYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYRE-LVPLADIVTPNYFEASLLSGVTV 161 (300)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHHH-HGGGCSEECCCHHHHHHHHSSCC
T ss_pred CCCCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHHH-HhhhCCEecCCHHHHHHHhCCCC
Confidence 9999999999999999999876433 789999999988889999999999998 99999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCeEEEeeeecCC----c--EEEEeeeccCCCCCCcEEEEEecccCCCCCCccHHHHHHHHHH
Q 021743 169 GSEADGREACKILHAAGPAKVVITSINIDG----N--LFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGW 242 (308)
Q Consensus 169 ~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~GaGD~f~a~l~~~ 242 (308)
.+.+++.+++++|+++|++.|+||+|+ .| . ++....... .+ .++.++++.|+++.+++||||+|+|+|+++
T Consensus 162 ~~~~~~~~aa~~L~~~G~~~Vvvt~g~-~g~~~~~~~~l~~~~~~~-~~-~~~~~~~~~~~v~~~~~GtGD~fsaal~a~ 238 (300)
T 3zs7_A 162 NDLSSAILAADWFHNCGVAHVIIKSFR-EQENPTHLRFLYSVKEGS-EA-AVRRFSGVVPYHEGRYTGTGDVFAACLLAF 238 (300)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEEEEEC----CCSEEEEEEEECCST-TS-CCEEEEEEEECCSSCBTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEecCc-CCCCCceEEEEEeccccc-cC-CCeEEEEEeccCCCCCcCHHHHHHHHHHHH
Confidence 888999999999999999999999996 44 1 222210000 00 024567778888889999999999999999
Q ss_pred HccCCCCHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCcccccccccchhhcCCCcceeEEeC
Q 021743 243 SNKYRDNLDIAAELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKFKSEKY 307 (308)
Q Consensus 243 l~~~g~~~~~A~~~A~a~~~~~i~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (308)
| + |.++++|+++|.++++.+++++.+.+ ..|-.+ ....||+++++|+.+++|+..|+++++
T Consensus 239 l-~-g~~~~~Av~~A~~~v~~~i~~t~~~~-~~g~~~-~~~~el~lv~~~~~~~~p~~~~~~~~~ 299 (300)
T 3zs7_A 239 S-H-SHPMDVAIGKSMAVLQELIIATRKEG-GDGKSS-LKSRELRVVASPQVVLQPSTVVDVKPI 299 (300)
T ss_dssp H-T-TSCHHHHHHHHHHHHHHHHHHTTC------------CBCCCSTTCHHHHHSCCSCCCCEEC
T ss_pred H-c-CCCHHHHHHHHHHHHHHHHHHHHHhC-CCCCCC-ccccchHHHhhHHHHhCCCcceEEEEC
Confidence 9 8 99999999999999999999998632 112112 235699999999999999999999886
No 2
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=100.00 E-value=5.2e-49 Score=354.72 Aligned_cols=276 Identities=31% Similarity=0.529 Sum_probs=243.8
Q ss_pred CCCCeEEEEeccCccCccchhhcHHHHHhcCCcceeeceEEeccCCCCCCceeeeCCHHHHHHHHHHHHhCCC-cccCEE
Q 021743 12 SETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNL-LYYTHL 90 (308)
Q Consensus 12 ~~~~~Vl~i~~~~~~G~~G~~a~~~~l~~~Gi~~~~v~t~~~~~~tg~~~~~g~~~~~~~~~~~l~~l~~~~~-~~~~~v 90 (308)
+.|++||+|+|++++|++|+.+++++++++|+++++++|+++++||+|..+.|+.++.++++++++.|.+... .++|+|
T Consensus 2 ~~m~~vl~I~~~~~~G~~g~~a~~~~l~~~G~~~~~~~T~~~s~~t~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~d~v 81 (289)
T 3pzs_A 2 NAMKNILSIQSHVVFGHAGNSAAEFPMRRMGVNVWPLNTVQFSNHTQYGHWTGCVMPASHLTDIVQGIADIDRLKDCDAV 81 (289)
T ss_dssp ---CEEEEEEEEESSSCSTHHHHHHHHHHTTCEEEEEEEEEESSCGGGSCCCEEECCHHHHHHHHHHHHHTTCGGGCCEE
T ss_pred CCCCeEEEEecccCCCccchHHHHHHHHHcCCeEEEeeeEEcCCCCCCCCcccccCCHHHHHHHHHHHHhcCCccCCCEE
Confidence 4689999999999999999999999999999999999999999999988778899999999999999987632 258999
Q ss_pred EEeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCC-CcCCChhhHHHHHHhhcccceEEcCCHHHHHHhhCCCCC
Q 021743 91 LTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEG-KLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIG 169 (308)
Q Consensus 91 ~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g-~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~~ 169 (308)
++|++++..+.+.+.++++.+|++++++++|+||||++.+ ..+.+++..+.+++.+++++|+||||.+|++.|+|.++.
T Consensus 82 ~~G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~~ 161 (289)
T 3pzs_A 82 LSGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALPASDMIAPNLLELEQLSGERVE 161 (289)
T ss_dssp EECCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHHHHCSEECCCHHHHHHHHTSCCC
T ss_pred EECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhhccCCEEeCCHHHHHHHhCCCCC
Confidence 9999999999999999999999876668999999999755 445788888999877899999999999999999999988
Q ss_pred CHHHHHHHHHHHHHcCCCeEEEeeeecCCc-------EEEEeeeccCCCCCCcEEEEEecccC---CCCCCccHHHHHHH
Q 021743 170 SEADGREACKILHAAGPAKVVITSINIDGN-------LFLIGSHQKEKGQSPEQFKIVIPKIP---AYFTGTGDLMTALL 239 (308)
Q Consensus 170 ~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~-------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~t~GaGD~f~a~l 239 (308)
+.+++.+++++|.++|++.|+||++..+|. ++... ++.++++.|+++ +|++||||+|+|+|
T Consensus 162 ~~~~~~~aa~~l~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~---------~~~~~~~~~~~~~~v~dt~GaGD~f~a~~ 232 (289)
T 3pzs_A 162 NVEQAVQVARSLCARGPKVVLVKHLSRAGYHADCFEMLLVTA---------DDAWHICRPLVDFGKRQPVGVGDLTSGLL 232 (289)
T ss_dssp SHHHHHHHHHHHHTTSCSEEEECCCGGGSSCTTEEEEEEECS---------SCEEEEEEECCCCTTSCCTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCEEEEecccCCCCCCCeEEEEEEeC---------CeEEEEEeeeecCCCCCCCcHHHHHHHHH
Confidence 889999999999999999999998644564 44322 456667777665 47999999999999
Q ss_pred HHHHccCCCCHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCcccccccccchhhcCCCcceeEEeC
Q 021743 240 LGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKFKSEKY 307 (308)
Q Consensus 240 ~~~l~~~g~~~~~A~~~A~a~~~~~i~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (308)
+++|++ |.++++|+++|+++++.+++++.+ .++.||+++++|+.+.+|+..|+++++
T Consensus 233 ~~~l~~-g~~~~~A~~~A~~~~~~~i~~t~~----------~g~~el~li~~~~~~~~p~~~~~~~~~ 289 (289)
T 3pzs_A 233 LVNLLK-GEPLDKALEHVTAAVYEVMLKTQE----------MGEYELQVVAAQETIVTPICQFTAVRL 289 (289)
T ss_dssp HHHHHT-TCCHHHHHHHHHHHHHHHHHHHHH----------TTCSSCCTTTTHHHHHSCSSCCCCEEC
T ss_pred HHHHHC-CCCHHHHHHHHHHHHHHHHHHHHH----------cCCcccccccChHHHhCCCcceeeeeC
Confidence 999998 999999999999999999999998 568999999999999999999999874
No 3
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=100.00 E-value=2.8e-42 Score=310.87 Aligned_cols=246 Identities=26% Similarity=0.448 Sum_probs=212.4
Q ss_pred CCCCeEEEEeccCccCccchhhcHHHHHhcCCcceeeceEEeccCCCCCCceeeeCCHHHHHHHHHHHHhCCCcccCEEE
Q 021743 12 SETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLL 91 (308)
Q Consensus 12 ~~~~~Vl~i~~~~~~G~~G~~a~~~~l~~~Gi~~~~v~t~~~~~~tg~~~~~g~~~~~~~~~~~l~~l~~~~~~~~~~v~ 91 (308)
.+|++||+|+|+|++|++|+++|+++++++|+.++.++|.+.++|||+..+.+.+++ ++++.+++.|.+.+. .+|+|+
T Consensus 5 ~~m~~vL~I~g~d~~GgaGi~adl~~~~a~G~~~~~v~Ta~~sq~tg~~~~~~~~~~-~~~~~~~~~~~~~d~-~~~aik 82 (291)
T 3mbh_A 5 NKVKKIAAVHDLSGMGRVSLTVVIPILSSMGFQVCPLPTAVLSNHTQYPGFSFLDLT-DEMPKIIAEWKKLEV-QFDAIY 82 (291)
T ss_dssp CCCCEEEEECCEEEESSCTHHHHHHHHHHTTCEEEECCCEEEEECTTSSCCCEEECT-TTHHHHHHHHHHTTC-CCSEEE
T ss_pred cccCcEEEEeCCCCCCcHHHHHHHHHHHHcCCeeeEEEEEEeccCCCCCCeeecCcH-HHHHHHHHHHHhcCC-ccCEEE
Confidence 347999999999999999999999999999999999999988877788777677776 799999999987654 689999
Q ss_pred EeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcC--CChhhHHHHHHhhcccceEEcCCHHHHHHhhCCCCC
Q 021743 92 TGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLY--VPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIG 169 (308)
Q Consensus 92 ~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~--~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~~ 169 (308)
+|++++.+.++.+.++++.+++ ++.++|||||++++|++| .+++.++.+++ +++++|+||||..|++.|+|.++.
T Consensus 83 ~G~l~s~~~i~~v~~~l~~~~~--~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~-ll~~adiitpN~~Ea~~L~g~~~~ 159 (291)
T 3mbh_A 83 TGYLGSPRQIQIVSDFIKDFRQ--PDSLIVADPVLGDNGRLYTNFDMEMVKEMRH-LITKADVITPNLTELFYLLDEPYK 159 (291)
T ss_dssp ECCCSSTTHHHHHHHHHHHHCC--TTCEEEECCCCEETTEECTTCCHHHHHHHHH-HGGGCSEECCBHHHHHHHHTCCCC
T ss_pred ECCCCCHHHHHHHHHHHHHhcC--CCCcEEECceeeeCCCCCCCCCHHHHHHHHH-HhccCCEEeCCHHHHHHHhCCCCC
Confidence 9999999999999999998865 378999999999877666 47888888886 999999999999999999998764
Q ss_pred ---CHHHHHHHHHHHHHcCCCeEEEeeeec------CCcEEEEeeeccCCCCCCcEEEEEecccCCCCCCccHHHHHHHH
Q 021743 170 ---SEADGREACKILHAAGPAKVVITSINI------DGNLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLL 240 (308)
Q Consensus 170 ---~~~d~~~~~~~l~~~g~~~Vvit~g~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~GaGD~f~a~l~ 240 (308)
+.+++++++++|+++|++.|+||+|+. .|.+++.. ++ ++.++++.++++++++||||+|+|+|+
T Consensus 160 ~~~~~~~~~~aa~~L~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~-----~~--~~~~~~~~~~~~~dt~GaGD~f~aai~ 232 (291)
T 3mbh_A 160 ADSTDEELKEYLRLLSDKGPQVVIITSVPVHDEPHKTSVYAYNR-----QG--NRYWKVTCPYLPAHYPGTGDTFTSVIT 232 (291)
T ss_dssp SCCCHHHHHHHHHHHHHTSCSEEEEEEEEETTEEEEEEEEEEET-----TT--TEEEEEEESCCGGGSTTHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhhCCCEEEEEeccccCCCCcEEEEEEeC-----CC--CeEEEEEecccCCCCCChHHHHHHHHH
Confidence 778999999999999999999998852 23344321 00 235567777777899999999999999
Q ss_pred HHHccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 021743 241 GWSNKYRDNLDIAAELAVSSLQALLQRTVN 270 (308)
Q Consensus 241 ~~l~~~g~~~~~A~~~A~a~~~~~i~~t~~ 270 (308)
++|++ |.++++|+++|+++++.+++++.+
T Consensus 233 a~l~~-g~~l~~A~~~A~~~~~~ai~~~~~ 261 (291)
T 3mbh_A 233 GSLMQ-GDSLPMALDRATQFILQGIRATFG 261 (291)
T ss_dssp HHHHT-TCCHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHc-CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 99998 999999999999999999998876
No 4
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=100.00 E-value=7.7e-42 Score=306.60 Aligned_cols=242 Identities=26% Similarity=0.344 Sum_probs=208.0
Q ss_pred CCeEEEEeccCccCccchhhcHHHHHhcCCcceeeceEEeccCC-CCCCceeeeCCHHHHHHHHHHHHhCCCcccCEEEE
Q 021743 14 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHT-GYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLT 92 (308)
Q Consensus 14 ~~~Vl~i~~~~~~G~~G~~a~~~~l~~~Gi~~~~v~t~~~~~~t-g~~~~~g~~~~~~~~~~~l~~l~~~~~~~~~~v~~ 92 (308)
+++||+|+|++++|++|+++|+++++++|+..+.++|.+.+++| |+..+.+.+++ ++++.+++.|...+. .+|+|++
T Consensus 3 ~~~vL~I~~~~~~GgaGi~Adl~~~~a~G~~~~~v~Ta~~sq~t~g~~~~~~~~~~-~~~~~~~~~~~~~d~-~~daik~ 80 (282)
T 3h74_A 3 LSTMLVAEDLSAVGGISLSSALPVLTAMQYDVAALPTSLLSTHTSGYGTPAVVDLS-TWLPQVFAHWTRAQL-HFDQALI 80 (282)
T ss_dssp CEEEEEEEEEEEESSCHHHHHHHHHHHTTEEEEEEEEEEEEECSSSSSSCCEECCT-TTHHHHHHHHHHTTC-CCSEEEE
T ss_pred CCeEEEEeCcCCCChHHHHHHHHHHHHcCCeeeeEEEEEeeEcCCCcceeeeecCh-HHHHHHHHHHHHcCC-ccCEEEE
Confidence 68999999999999999999999999999999999998887777 88776667776 688899999876543 6899999
Q ss_pred eccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcC--CChhhHHHHHHhhcccceEEcCCHHHHHHhhCCCCCC
Q 021743 93 GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLY--VPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGS 170 (308)
Q Consensus 93 G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~--~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~~~ 170 (308)
||+++.+.++.+.++++++ ++.++||||||+++|.+| .+++.++.+++ +++.+|+||||..|++.|+|.++.+
T Consensus 81 G~l~s~~~i~~v~~~l~~~----~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~-ll~~adiitpN~~Ea~~L~g~~~~~ 155 (282)
T 3h74_A 81 GYVGSVALCQQITTYLEQQ----TLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQ-LIQQADVILPNTTEAALLTGAPYQV 155 (282)
T ss_dssp CCCCSHHHHHHHHHHHHHS----CCSEEEECCCCEETTEECTTCCHHHHHHHHH-HGGGCSEECCCHHHHHHHHTCCCCS
T ss_pred CCCCCHHHHHHHHHHHHHC----CCCcEEEcCeeecCCCCCCCCCHHHHHHHHH-HhccCCEECCCHHHHHHHhCCCCCC
Confidence 9999999899888888765 367999999999877766 47888888886 9999999999999999999998776
Q ss_pred HHHHHHHHHHHHH-cCC-CeEEEeeee---cCCcEEEEeeeccCCCCCCcEEEEEecccCCCCCCccHHHHHHHHHHHcc
Q 021743 171 EADGREACKILHA-AGP-AKVVITSIN---IDGNLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNK 245 (308)
Q Consensus 171 ~~d~~~~~~~l~~-~g~-~~Vvit~g~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~GaGD~f~a~l~~~l~~ 245 (308)
.+++++++++|.+ +|+ +.|+||+|+ ..|.+++.. . ++.++++.++++.+++||||+|+|+|+++|++
T Consensus 156 ~~~~~~aa~~L~~~~g~~~~Vvvt~G~~~~~~g~~~~~~-----~---~~~~~~~~~~v~~dt~GaGD~fsaai~a~l~~ 227 (282)
T 3h74_A 156 TPDLEVILPALQAQLKTGAHAVITDVQRADQIGCAWLDE-----A---GHVQYCGARRLPGHYNGTGDTLAAVIAGLLGR 227 (282)
T ss_dssp SCCHHHHHHHHHTTSCTTCEECEEEEEETTEEEEEEECT-----T---SCEEEEEEECCSSCCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEecCCCCceEEEEEeC-----C---CeEEEEEecCCCCCCcCHHHHHHHHHHHHHHC
Confidence 6788899999998 899 999999985 123333311 0 34566777777789999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHh
Q 021743 246 YRDNLDIAAELAVSSLQALLQRTVND 271 (308)
Q Consensus 246 ~g~~~~~A~~~A~a~~~~~i~~t~~~ 271 (308)
|.++++|+++|+++++.+++++.+.
T Consensus 228 -g~~l~~A~~~A~~~~~~ai~~~~~~ 252 (282)
T 3h74_A 228 -GYPLAPTLARANQWLNMAVAETIAQ 252 (282)
T ss_dssp -TCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999874
No 5
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=100.00 E-value=1.1e-36 Score=276.93 Aligned_cols=292 Identities=48% Similarity=0.843 Sum_probs=231.5
Q ss_pred CCCCeEEEEeccCccCccchhhcHHHHHhcCCcceeeceEEeccCCCCCCceeeeCCHHHHHHHHHHHHhCCCcccCEEE
Q 021743 12 SETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLL 91 (308)
Q Consensus 12 ~~~~~Vl~i~~~~~~G~~G~~a~~~~l~~~Gi~~~~v~t~~~~~~tg~~~~~g~~~~~~~~~~~l~~l~~~~~~~~~~v~ 91 (308)
..+++||+|++++..|++|.....+.|++.|+++.+++++.+++++++..+.|..+++++++.+++.+.......+++++
T Consensus 2 ~~~~~vl~i~~~~~~g~vG~D~g~~iL~~~GV~~~~v~~~~~~~~t~~~~~~g~~l~~~~i~~~~~~~~~~~~~~~~~v~ 81 (312)
T 2yxt_A 2 EEECRVLSIQSHVIRGYVGNRAATFPLQVLGFEIDAVNSVQFSNHTGYAHWKGQVLNSDELQELYEGLRLNNMNKYDYVL 81 (312)
T ss_dssp -CCCEEEEEEEEESSSCSTHHHHHHHHHHTTCEEEEEEEEEESSCTTSSCCCEEECCHHHHHHHHHHHHHTTCCCCSEEE
T ss_pred CCCCeEEEEecccCCCccchHhhHHHHHHcCCeEEEEEEEEecCCCCcCCccCccCCHHHHHHHHHHHHhcCCccCCEEE
Confidence 45689999999999999998654444899999999998876567777654567889988999888887654222478899
Q ss_pred EeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccC----CCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhhCCC
Q 021743 92 TGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDE----GKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFR 167 (308)
Q Consensus 92 ~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~----g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~ 167 (308)
+|++++....+.+.++++.++++...+++++||++++. |.+|..++..+.+++.+++++|+++||++|++.|+|.+
T Consensus 82 ~G~~~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g~~ 161 (312)
T 2yxt_A 82 TGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVPLADIITPNQFEAELLSGRK 161 (312)
T ss_dssp ECCCCCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGGGCSEECCCHHHHHHHHSCC
T ss_pred ECCCCCHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhhhCCEEcCCHHHHHHHhCCC
Confidence 99999877788888999999887434568999999854 77777667777776558999999999999999999988
Q ss_pred CCCHHHHHHHHHHHHHcCCCeEEEeeeec-----CCcEEEEeee---ccCCCCCC----cEEEEEecccCCCCCCccHHH
Q 021743 168 IGSEADGREACKILHAAGPAKVVITSINI-----DGNLFLIGSH---QKEKGQSP----EQFKIVIPKIPAYFTGTGDLM 235 (308)
Q Consensus 168 ~~~~~d~~~~~~~l~~~g~~~Vvit~g~~-----~g~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~t~GaGD~f 235 (308)
+.+.+++.+++++|+++|++.|+||+|+. +|++++.... .. + + +.++++.+++++||+||||+|
T Consensus 162 ~~~~~~~~~~~~~l~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~v~vdttGAGDaf 237 (312)
T 2yxt_A 162 IHSQEEALRVMDMLHSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNP-A---GSVVMERIRMDIRKVDAVFVGTGDLF 237 (312)
T ss_dssp CCSHHHHHHHHHHHHHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC--------CCCCEEEEEEEEECCSSCCSSHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCCceEEEEEecccccc-c---cccccceEEEeecccCCCCCCchHHH
Confidence 87788899999999999999999999852 2456542100 00 0 1 345666666667999999999
Q ss_pred HHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHhhh---hcCCCCCCCcccccccccchhhcCCCcceeEEeC
Q 021743 236 TALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYV---TAGFDPQSSSLEIRLIQSQDDIRNPQVKFKSEKY 307 (308)
Q Consensus 236 ~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (308)
+|+|+++|++.|.++++|+++|+++++.+++++.+.+. +.|..+-..+.||+++++|+.+..|+.+|+++++
T Consensus 238 ~a~~~~~l~~~g~~l~~a~~~A~a~a~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~ 312 (312)
T 2yxt_A 238 AAMLLAWTHKHPNNLKVACEKTVSTLHHVLQRTIQCAKAQAGEGVRPSPMQLELRMVQSKRDIEDPEIVVQATVL 312 (312)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCCCCTTTTSCCCGGGHHHHHSCCCCCCCEEC
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhcccccccCCCccccchhhhhhhCHHHHhCCCcceeeccC
Confidence 99999999942699999999999999999999988542 3344444455899999999999999999988653
No 6
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-37 Score=297.57 Aligned_cols=258 Identities=17% Similarity=0.160 Sum_probs=206.6
Q ss_pred CCCccccCCCCCCCeEEEEeccCccCccchhhcHHHHHhcCCcceeece-EEeccCCCCCCceeeeCCHHHHHHHHHHHH
Q 021743 2 APPILSLALPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHS-VQFSNHTGYPTFKGQVLNGQQLCDLIEGLE 80 (308)
Q Consensus 2 ~~~~~~~~~~~~~~~Vl~i~~~~~~G~~G~~a~~~~l~~~Gi~~~~v~t-~~~~~~tg~~~~~g~~~~~~~~~~~l~~l~ 80 (308)
.||||.++.+..+|+||+|+|+|++||+|+++|+++|+++|+....+.| ++.+++.++. ....++++.+..+++.+.
T Consensus 10 ~~~~~~~~~~~~~~~vL~IaGsd~~gGAgi~Adlktl~a~g~~~~~~~Tavt~q~~~~v~--~~~~~p~~~v~~ql~~~~ 87 (550)
T 3rm5_A 10 PPPYLTLACNEKLPTVLSIAGTDPSGGAGIEADVKTITAHRCYAMTCITALNAQTPVKVY--SINNTPKEVVFQTLESNL 87 (550)
T ss_dssp CCTTGGGGTTBCCCEEEEEEEBCTTSSSHHHHHHHHHHHTTCEEEEEEEEEEEECSSCEE--EEEECCHHHHHHHHHHHH
T ss_pred CCcccccccCCCCCEEEEEeCcCCCcHHHHHHHHHHHHHcCCeeceeceEEEeecCCCcc--eEEECCHHHHHHHHHHHH
Confidence 4899999999999999999999999999999999999999977755544 4455655543 346678878888887776
Q ss_pred hCCCcccCEEEEeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccc-cCCCcCCChhhHHHHHHhhcccceEEcCCHHH
Q 021743 81 ANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG-DEGKLYVPSELVSVYREKVVPVASMLTPNQFE 159 (308)
Q Consensus 81 ~~~~~~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~-~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E 159 (308)
+.. .+|+|++|++ +.+.++.+.++++.+++. +.++|+|||++ ++|..+.+++.++.+++.+++.+|+||||..|
T Consensus 88 ~d~--~~daIkiG~l-s~~~i~~v~~~l~~~~~~--~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll~~a~iitPN~~E 162 (550)
T 3rm5_A 88 KDM--KCNVIKTGML-TAAAIEVLHEKLLQLGEN--RPKLVVDPVLVATSGSSLAGKDIVSLITEKVAPFADILTPNIPE 162 (550)
T ss_dssp HHB--CCSEEEECSC-CHHHHHHHHHHHHHHGGG--SCEEEECCCC---------CTTHHHHHHHHTGGGCSEECCBHHH
T ss_pred hCC--CCCEEEECCC-CHHHHHHHHHHHHHhccc--CCCEEEecceecCCCCcCCCHHHHHHHHHHhhCcceEEecCHHH
Confidence 432 4899999999 999999999999988765 56899999997 46777778899998986699999999999999
Q ss_pred HHHhhCCC--CCCHHHHHHHHHHHHHcCC-CeEEEeeeecC--C-----c--EEEEeeeccCCCCCCcEEEEEecccC-C
Q 021743 160 AEQLTGFR--IGSEADGREACKILHAAGP-AKVVITSINID--G-----N--LFLIGSHQKEKGQSPEQFKIVIPKIP-A 226 (308)
Q Consensus 160 ~~~L~g~~--~~~~~d~~~~~~~l~~~g~-~~Vvit~g~~~--g-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 226 (308)
++.|+|.+ +.+.+++.+++++|.++|. +.|+||+|+.. | . +++.. + . ++.+.++.++++ .
T Consensus 163 a~~L~g~~~~i~~~~d~~~aa~~L~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~--~--~---~~~~~~~~~~v~~~ 235 (550)
T 3rm5_A 163 CYKLLGEERKVNGLQDIFQIAKDLAKITKCSNILVKGGHIPWNDEKEKYITDVLFLG--A--E---QKFIIFKGNFVNTT 235 (550)
T ss_dssp HHHHHSCCCCCCSSHHHHHHHHHHHHHHCCSCEEEEECC-------CCEEEEEEEET--T--T---TEEEEEEEECCCCS
T ss_pred HHHHhCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEc--C--C---CeEEEEEecCcCCC
Confidence 99999974 5667889999999998876 89999998631 1 1 23320 0 1 356667777877 4
Q ss_pred CCCCccHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 021743 227 YFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYVT 274 (308)
Q Consensus 227 ~t~GaGD~f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~~t~~~~~~ 274 (308)
+++||||+|+|+|+++|++ |.++.+|+++|+++++.+++++.+-+.+
T Consensus 236 ~t~GtGD~fsaaiaa~La~-G~~l~eAv~~A~~~v~~ai~~~~~~g~g 282 (550)
T 3rm5_A 236 HTHGTGCTLASAIASNLAR-GYSLPQSVYGGIEYVQNAVAIGCDVTKE 282 (550)
T ss_dssp CCBTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHHCBCCBCT
T ss_pred CCcChhHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999 9999999999999999999998765545
No 7
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=100.00 E-value=2.2e-34 Score=258.22 Aligned_cols=247 Identities=28% Similarity=0.394 Sum_probs=205.2
Q ss_pred CCeEEEEeccCccCccchhhcHHHHHhcCCcceeeceEEeccCCCCCCceeeeCCHHHHHHHHHHHHhCC-CcccCEEEE
Q 021743 14 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANN-LLYYTHLLT 92 (308)
Q Consensus 14 ~~~Vl~i~~~~~~G~~G~~a~~~~l~~~Gi~~~~v~t~~~~~~tg~~~~~g~~~~~~~~~~~l~~l~~~~-~~~~~~v~~ 92 (308)
+++||.|++++.+|++|+.++...|+++|+++.+++|.+..+++++..+.+..++.++++.+++.+.+.+ ...++++++
T Consensus 15 ~~~vL~i~~~~~~g~~G~d~~~~~l~~~Gv~~~~v~t~i~~~~~g~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~v~~ 94 (283)
T 2ddm_A 15 QADIVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVTT 94 (283)
T ss_dssp CCSEEEEEEEESSSSSTHHHHHHHHHHTTCCEEEEEEEEESSCTTSSCCCEEECCHHHHHHHHHHHHHTTCCTTCCEEEE
T ss_pred cCeEEEEecccCCCcchHHHHHHHHHHcCCeeeEEeEEEeccCCCcCceeeeeCCHHHHHHHHHHHHhcCCcccCCEEEE
Confidence 4899999999999999999888889999999999988776666776655677888889988888887632 213789999
Q ss_pred eccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccC-CCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhhCCCCCCH
Q 021743 93 GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDE-GKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSE 171 (308)
Q Consensus 93 G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~-g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~~~~ 171 (308)
|+++.....+.+.++++.++++.+++++++||++++. |.+|.+++..+.+++.+++++|+++||..|++.|+|.++.+.
T Consensus 95 G~l~~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g~~~~~~ 174 (283)
T 2ddm_A 95 GYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKNCRDL 174 (283)
T ss_dssp CCCSCHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBHHHHHHHHTSCCSSH
T ss_pred CCcCCHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCHHHHHHHhCCCCCCH
Confidence 9998877788899999998873237899999999853 467777666666655589999999999999999999887777
Q ss_pred HHHHHHHHHHHHcCCCeEEEeeeecC-------CcEEEEeeeccCCCCCCcEEEEEecccCCCCCCccHHHHHHHHHHHc
Q 021743 172 ADGREACKILHAAGPAKVVITSINID-------GNLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSN 244 (308)
Q Consensus 172 ~d~~~~~~~l~~~g~~~Vvit~g~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~GaGD~f~a~l~~~l~ 244 (308)
++..+++++|.++|++.|+||+|+ + |+++... ++.++++.+++++|++||||+|+|+|+++|+
T Consensus 175 ~~~~~~a~~l~~~g~~~Vvvt~G~-~~~~~~~~G~~~~~~---------~~~~~~~~~~v~vdt~GAGDaf~a~~~~~l~ 244 (283)
T 2ddm_A 175 DSAIAAAKSLLSDTLKWVVVTSAS-GNEENQEMQVVVVTA---------DSVNVISHSRVKTDLKGTGDLFCAQLISGLL 244 (283)
T ss_dssp HHHHHHHHHHCCSSCCEEEEEC--------CEEEEEEEET---------TEEEEEEEECCCCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEcccc-CccCCCceeEEEEeC---------CceEEEeeceeCCCCCChHHHHHHHHHHHHH
Confidence 888999999988999999999996 5 5565532 3456677666668999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 021743 245 KYRDNLDIAAELAVSSLQALLQRTVND 271 (308)
Q Consensus 245 ~~g~~~~~A~~~A~a~~~~~i~~t~~~ 271 (308)
+ |.++++|+++|+++++.+++++...
T Consensus 245 ~-g~~~~~A~~~A~a~a~~~v~~~~~~ 270 (283)
T 2ddm_A 245 K-GKALTDAVHRAGLRVLEVMRYTQQH 270 (283)
T ss_dssp T-TCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred c-CCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 8 9999999999999999999999873
No 8
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=100.00 E-value=2.4e-32 Score=243.42 Aligned_cols=247 Identities=21% Similarity=0.208 Sum_probs=191.2
Q ss_pred CCCeEEEEeccCccCccchhhcHHHHHhcCCcceeeceEEec-cCCCCCCceeeeCCHHHHHHHHHHHHhCCCcccCEEE
Q 021743 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFS-NHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLL 91 (308)
Q Consensus 13 ~~~~Vl~i~~~~~~G~~G~~a~~~~l~~~Gi~~~~v~t~~~~-~~tg~~~~~g~~~~~~~~~~~l~~l~~~~~~~~~~v~ 91 (308)
+|++||+|.|+|.+|++|+.+++.+++.+|+....+.|+... ++.+........++++.+...++.+.+.. .+|+++
T Consensus 2 ~~~~vl~i~G~d~~gga~~~a~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~d~v~ 79 (271)
T 2i5b_A 2 SMHKALTIAGSDSSGGAGIQADLKTFQEKNVYGMTALTVIVAMDPNNSWNHQVFPIDTDTIRAQLATITDGI--GVDAMK 79 (271)
T ss_dssp -CCEEEEEEEEETTSSSHHHHHHHHHHHTTCEEEEEEEEEEEEETTTTTEEEEEECCHHHHHHHHHHHHHHS--CCSEEE
T ss_pred CCCEEEEEeCcCCCchHHHHHHHHHHHHcCCEEeEEeeEEEeEcCCCCceeEEEeCCHHHHHHHHHHHHhCC--CCCEEE
Confidence 578999999999999999999999999999877777776653 33331122335777777777777665432 478999
Q ss_pred EeccCCHhHHHHHHHHHHHHHhcCCCc-eEEEcccccc-CCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhhCCC-C
Q 021743 92 TGYIGSVSFLNTILQVVEKLRSINPNL-IYVCDPVMGD-EGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFR-I 168 (308)
Q Consensus 92 ~G~l~~~~~~~~~~~~l~~~k~~~~~~-~vv~Dpv~~~-~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~-~ 168 (308)
+|++++.+.. ..+++.+++. +. ++++||++++ .+..+..++..+.+++.+++.+|++|||..|++.|+|.+ +
T Consensus 80 ~G~l~~~~~~---~~~~~~~~~~--~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L~g~~~~ 154 (271)
T 2i5b_A 80 TGMLPTVDII---ELAAKTIKEK--QLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLSGMDEL 154 (271)
T ss_dssp ECCCCSHHHH---HHHHHHHHHT--TCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHHHTCCCC
T ss_pred ECCCCCHHHH---HHHHHHHHhC--CCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHHhCCCCC
Confidence 9999875444 4455555554 55 5999999985 344456666667776458999999999999999999987 7
Q ss_pred CCHHHHHHHHHHHHHcCCCeEEEeeeec-CCc----EEEEeeeccCCCCCCcEEEEEecccCC-CCCCccHHHHHHHHHH
Q 021743 169 GSEADGREACKILHAAGPAKVVITSINI-DGN----LFLIGSHQKEKGQSPEQFKIVIPKIPA-YFTGTGDLMTALLLGW 242 (308)
Q Consensus 169 ~~~~d~~~~~~~l~~~g~~~Vvit~g~~-~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~t~GaGD~f~a~l~~~ 242 (308)
.+.++..+++++|.++|++.|++|+|+. +|. +++.. ++.++++.+++++ +++||||+|+|+|+++
T Consensus 155 ~~~~~~~~~a~~l~~~g~~~Vvvt~g~~~~g~~~~~~~~~~---------~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~ 225 (271)
T 2i5b_A 155 KTVDDMIEAAKKIHALGAQYVVITGGGKLKHEKAVDVLYDG---------ETAEVLESEMIDTPYTHGAGCTFSAAVTAE 225 (271)
T ss_dssp CSHHHHHHHHHHHHTTTCSEEEEECGGGSCSSSEEEEEECS---------SCEEEEEECCCCCSCCBTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCCceEEEEEeC---------CeEEEEeccccCCCCCCChHHHHHHHHHHH
Confidence 7778889999999999999999999951 564 44321 4566677777764 9999999999999999
Q ss_pred HccCCCCHHHHHHHHHHHHHHHHHHHHHhhhhcC
Q 021743 243 SNKYRDNLDIAAELAVSSLQALLQRTVNDYVTAG 276 (308)
Q Consensus 243 l~~~g~~~~~A~~~A~a~~~~~i~~t~~~~~~~~ 276 (308)
|++ |.++++|+++|+++++.+++++.+.+.+.|
T Consensus 226 l~~-g~~~~~A~~~A~~~~~~~~~~~~~~g~g~~ 258 (271)
T 2i5b_A 226 LAK-GAEVKEAIYAAKEFITAAIKESFPLNQYVG 258 (271)
T ss_dssp HHT-TCCHHHHHHHHHHHHHHHHHTCCCSSSSCC
T ss_pred HHc-CCCHHHHHHHHHHHHHHHHHHhhccCCCCC
Confidence 998 999999999999999999988765433334
No 9
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=100.00 E-value=6e-32 Score=239.07 Aligned_cols=238 Identities=24% Similarity=0.300 Sum_probs=178.8
Q ss_pred CCeEEEEeccCccCccchhhcHHHHHhcCCcceeeceEEe-ccCCCCCCceeeeCCHHHHHHHHHHHHhCCCcccCEEEE
Q 021743 14 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQF-SNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLT 92 (308)
Q Consensus 14 ~~~Vl~i~~~~~~G~~G~~a~~~~l~~~Gi~~~~v~t~~~-~~~tg~~~~~g~~~~~~~~~~~l~~l~~~~~~~~~~v~~ 92 (308)
|++||+|.|+|.+|++|+.+++.+++.+|...+.+.|+.. +++..+. ....++++.+.+.++.+.+.. +++++++
T Consensus 1 ~~~vl~i~G~d~~ggag~~a~~~~~~~~~~~g~~~vt~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~v~~ 76 (258)
T 1ub0_A 1 MRVALTIAGSDSGGGAGVQADLKVFFRFGVYGTSALTLVTAQNTLGVQ--RVHLLPPEVVYAQIESVAQDF--PLHAAKT 76 (258)
T ss_dssp CCEEEEEEEEETTSSSHHHHHHHHHHHTTCEEEEEEEEEEEEETTEEE--EEEECCHHHHHHHHHHHHHHS--CCSEEEE
T ss_pred CCEEEEEeccCCCchHHHHHHHHHHHHhCCEEeEeeeEEEeecCCcee--EEEeCCHHHHHHHHHHHHcCC--CCCEEEE
Confidence 6899999999999999999999999999976555555544 3433221 235677766665555543311 3688999
Q ss_pred eccCCHhHHHHHHHHHHHHHhcCCC-ceEEEcccccc-CCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhhCCCCCC
Q 021743 93 GYIGSVSFLNTILQVVEKLRSINPN-LIYVCDPVMGD-EGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGS 170 (308)
Q Consensus 93 G~l~~~~~~~~~~~~l~~~k~~~~~-~~vv~Dpv~~~-~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~~~ 170 (308)
|++++.+..+ .+++.+++. + .++++||++++ +|..+.+++..+.+++.+++++|++|||+.|++.|+|.++.+
T Consensus 77 G~l~~~~~~~---~~~~~~~~~--~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g~~~~~ 151 (258)
T 1ub0_A 77 GALGDAAIVE---AVAEAVRRF--GVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLGRPIRT 151 (258)
T ss_dssp CCCCSHHHHH---HHHHHHHHT--TCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHHCSCCCS
T ss_pred CCcCCHHHHH---HHHHHHHhC--CCCcEEECCeeecCCCCcccChHHHHHHHHhhcccCeEEeCCHHHHHHHhCCCCCC
Confidence 9998665444 445555554 5 68999999985 454455555556665558999999999999999999988877
Q ss_pred HHHHHHHHHHHHHcCCCeEEEeeeecC-C----cEEEEeeeccCCCCCCcEEEEEecccCC-CCCCccHHHHHHHHHHHc
Q 021743 171 EADGREACKILHAAGPAKVVITSINID-G----NLFLIGSHQKEKGQSPEQFKIVIPKIPA-YFTGTGDLMTALLLGWSN 244 (308)
Q Consensus 171 ~~d~~~~~~~l~~~g~~~Vvit~g~~~-g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~t~GaGD~f~a~l~~~l~ 244 (308)
.++..+++++|.++|++.|++|+|+ . | ++++.. ++.++++.+++++ |++||||+|+|+|+++|+
T Consensus 152 ~~~~~~~a~~l~~~g~~~vvvt~g~-~~G~~~~~~~~~~---------~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~ 221 (258)
T 1ub0_A 152 LKEAEEAAKALLALGPKAVLLKGGH-LEGEEAVDLLATR---------GGVLRFSAPRVHTRNTHGTGCTLSAAIAALLA 221 (258)
T ss_dssp HHHHHHHHHHHHTTSCSCEEEEEEE-CC---EEEEEEET---------TEEEEEEECCCCCSCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEccCC-CCCCceEEEEEeC---------CeEEEEeccccCCCCCCChHHHHHHHHHHHHH
Confidence 7888999999999999999999996 5 7 455432 4556677777764 999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 021743 245 KYRDNLDIAAELAVSSLQALLQRTVND 271 (308)
Q Consensus 245 ~~g~~~~~A~~~A~a~~~~~i~~t~~~ 271 (308)
+ |.++++|+++|+++++.+++++.+.
T Consensus 222 ~-g~~~~~a~~~a~~~~~~~~~~~~~~ 247 (258)
T 1ub0_A 222 K-GRPLAEAVAEAKAYLTRALKTAPSL 247 (258)
T ss_dssp T-TCCHHHHHHHHHHHHHHHHHTCCCC
T ss_pred c-CCCHHHHHHHHHHHHHHHHHHhhcc
Confidence 8 9999999999999999999877653
No 10
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.97 E-value=1.6e-30 Score=233.75 Aligned_cols=243 Identities=17% Similarity=0.184 Sum_probs=178.0
Q ss_pred ccCCCCCCCeEEEEeccCccCccchhhcHHHHHhcCCcceeeceEEe-ccCCCCCCceeeeCCHHHHHHHHHHHHhCCCc
Q 021743 7 SLALPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQF-SNHTGYPTFKGQVLNGQQLCDLIEGLEANNLL 85 (308)
Q Consensus 7 ~~~~~~~~~~Vl~i~~~~~~G~~G~~a~~~~l~~~Gi~~~~v~t~~~-~~~tg~~~~~g~~~~~~~~~~~l~~l~~~~~~ 85 (308)
...++.+|++||+|.|+|.+|++|+.++..+++.+|.....+.|+.. +++..+.. ...++++.+.+.++.+.+..
T Consensus 18 ~~~~~~~~~~vl~i~G~D~~ggagi~a~~~~~~~~g~~g~~~it~~~~~n~~~~~~--~~~~~~~~~~~~~~~l~~~~-- 93 (288)
T 1jxh_A 18 IQGRHMQRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAENTCGVQS--VYRIEPDFVAAQLDSVFSDV-- 93 (288)
T ss_dssp -----CCCCEEEEEEECCTTSSSHHHHHHHHHHHTTCEEEEEEEEEEEEETTEEEE--EEECCHHHHHHHHHHHHTTS--
T ss_pred cCCCCCCCCEEEEEeCcCCCchHHHHHHHHHHHHcCCEEeEEeeEEEeecCCCeee--eeeCCHHHHHHHHHHHHhCC--
Confidence 34566788999999999999999999988889888876665555544 34433221 34677777666665554321
Q ss_pred ccCEEEEeccCCHhHHHHHHHHHHHHHhcCCCce-EEEccccc-cCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHh
Q 021743 86 YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLI-YVCDPVMG-DEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQL 163 (308)
Q Consensus 86 ~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~-vv~Dpv~~-~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L 163 (308)
.++++++|++++.+ .+..+++.+++. +.+ +++||+++ .+|..+.+++..+.+++.+++.+|++|||..|++.|
T Consensus 94 ~~~~v~~G~l~~~~---~~~~~~~~~~~~--~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L 168 (288)
T 1jxh_A 94 RIDTTKIGMLAETD---IVEAVAERLQRH--HVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAAL 168 (288)
T ss_dssp CCSEEEECCCCSHH---HHHHHHHHHHHT--TCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHH
T ss_pred CCCEEEECCCCCHH---HHHHHHHHHHHC--CCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHhhCcEEcCCHHHHHHH
Confidence 37899999988654 444556666665 565 99999998 456555566666666655889999999999999999
Q ss_pred hCC-CCCCHHHHHHHHHHHHHcCCCeEEEeeeecCC-----cEEEEeeeccCCCCCCcEEEEEecccC-CCCCCccHHHH
Q 021743 164 TGF-RIGSEADGREACKILHAAGPAKVVITSINIDG-----NLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMT 236 (308)
Q Consensus 164 ~g~-~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~GaGD~f~ 236 (308)
+|. ++.+.+++.+++++|.++|++.|+||+|. +| ++++.. ++.++++.++++ +|++||||+|+
T Consensus 169 ~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~-~G~~~~~~~~~~~---------~~~~~~~~~~~~~vdttGAGD~f~ 238 (288)
T 1jxh_A 169 LDAPHARTEQEMLAQGRALLAMGCEAVLMKGGH-LEDAQSPDWLFTR---------EGEQRFSAPRVNTKNTHGTGCTLS 238 (288)
T ss_dssp HTCCCCCSHHHHHHHHHHHHHTTCSEEEEBC----------CEEECS---------SCEEEC---CCCCSCCBTHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHHHHhCCCEEEEeccC-CCCCceeEEEEEC---------CeEEEEeccccCCCCCCCchHHHH
Confidence 998 77777888999999999999999999996 67 666532 345666666666 49999999999
Q ss_pred HHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHH
Q 021743 237 ALLLGWSNKYRDNLDIAAELAVSSLQALLQRTV 269 (308)
Q Consensus 237 a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~~t~ 269 (308)
|+|+++|++ |.++++|+++|+++++.+++++.
T Consensus 239 a~~~a~l~~-g~~~~~A~~~A~a~a~~~v~~~~ 270 (288)
T 1jxh_A 239 AALAALRPR-HRSWGETVNEAKAWLSAALAQAD 270 (288)
T ss_dssp HHHHHHGGG-SSSHHHHHHHHHHHHHHHHTTGG
T ss_pred HHHHHHHHc-CCCHHHHHHHHHHHHHHHHHhhc
Confidence 999999999 99999999999999999998775
No 11
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=99.89 E-value=9.5e-22 Score=177.88 Aligned_cols=173 Identities=17% Similarity=0.207 Sum_probs=137.9
Q ss_pred eeCCHHHHHHHHHHHHhCCCcccC-EEEEeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHH
Q 021743 65 QVLNGQQLCDLIEGLEANNLLYYT-HLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYR 143 (308)
Q Consensus 65 ~~~~~~~~~~~l~~l~~~~~~~~~-~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~ 143 (308)
..+++++++.+++.+.... ..+ +++.|+++.+...+.+.++++.++++ ++++++||.. +.++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~--~~~v~~D~~~-------------~~l~ 173 (309)
T 3umo_A 111 AALNEDEFRQLEEQVLEIE--SGAILVISGSLPPGVKLEKLTQLISAAQKQ--GIRCIVDSSG-------------EALS 173 (309)
T ss_dssp CCCCHHHHHHHHHHHTTSC--TTCEEEEESCCCTTCCHHHHHHHHHHHHHT--TCEEEEECCH-------------HHHH
T ss_pred CCCCHHHHHHHHHHHHhcC--CCCEEEEEccCCCCCCHHHHHHHHHHHHhc--CCEEEEECCc-------------HHHH
Confidence 3466677777766665332 245 45578888766678888999999887 7899999942 1344
Q ss_pred Hhhccc--ceEEcCCHHHHHHhhCCCCCCHHHHHHHHHHHHHcCC-CeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEE
Q 021743 144 EKVVPV--ASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGP-AKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIV 220 (308)
Q Consensus 144 ~~ll~~--~diitpN~~E~~~L~g~~~~~~~d~~~~~~~l~~~g~-~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~ 220 (308)
+ +++. +|+++||+.|++.|+|.+..+.+++.++++.|+++|. +.|+||.|. +|+++... ++.++++
T Consensus 174 ~-~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~~vvvt~G~-~G~~~~~~---------~~~~~~~ 242 (309)
T 3umo_A 174 A-ALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRVVVSLGP-QGALGVDS---------ENCIQVV 242 (309)
T ss_dssp H-HTSSCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHHHTTSBSCEEEECGG-GCEEEECS---------SCEEEEC
T ss_pred H-HhccCCCeEEEeCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCcEEEEEcCc-ccEEEEEC---------CcEEEEe
Confidence 4 6776 5999999999999999887777788999999999887 899999995 88877643 4566677
Q ss_pred ecccC-CCCCCccHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHH
Q 021743 221 IPKIP-AYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 221 ~~~~~-~~t~GaGD~f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
.++++ +|++||||+|+|+|+++|++ |.++++|+++|+++++.++.
T Consensus 243 ~~~v~vvdttGAGD~f~a~~~~~l~~-g~~~~~a~~~A~~~aa~~v~ 288 (309)
T 3umo_A 243 PPPVKSQSTVGAGDSMVGAMTLKLAE-NASLEEMVRFGVAAGSAATL 288 (309)
T ss_dssp CCSCCCSCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHTT
T ss_pred CCCcCCCCCcChHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhc
Confidence 66666 59999999999999999998 99999999999998777765
No 12
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=99.88 E-value=1.5e-21 Score=176.42 Aligned_cols=176 Identities=19% Similarity=0.222 Sum_probs=139.5
Q ss_pred eeeCCHHHHHHHHHHHHhCCCcccCEEE-EeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHH
Q 021743 64 GQVLNGQQLCDLIEGLEANNLLYYTHLL-TGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVY 142 (308)
Q Consensus 64 g~~~~~~~~~~~l~~l~~~~~~~~~~v~-~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l 142 (308)
+..+++++++.+++.+.... .++++. .|+++.....+.+.++++.++++ +.++++||+. +.+
T Consensus 105 g~~~~~~~~~~~~~~~~~~~--~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~-------------~~~ 167 (306)
T 2abq_A 105 APLIKKEHVQALLEQLTELE--KGDVLVLAGSVPQAMPQTIYRSMTQIAKER--GAFVAVDTSG-------------EAL 167 (306)
T ss_dssp CCCCCHHHHHHHHHHHTTCC--TTCEEEEESCCCTTSCTTHHHHHHHHHHTT--TCEEEEECCH-------------HHH
T ss_pred CCCCCHHHHHHHHHHHHhcc--CCCEEEEecCCCCCCCHHHHHHHHHHHHhc--CCEEEEECCh-------------HHH
Confidence 34566677777666654321 377655 58887544456777888888876 7899999942 124
Q ss_pred HHhhcc-cceEEcCCHHHHHHhhCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEe
Q 021743 143 REKVVP-VASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVI 221 (308)
Q Consensus 143 ~~~ll~-~~diitpN~~E~~~L~g~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~ 221 (308)
++ +++ ++|+++||..|++.|+|.+..+.+++.++++.|.++|++.|++|.|. +|+++... ++.++++.
T Consensus 168 ~~-~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~---------~~~~~~~~ 236 (306)
T 2abq_A 168 HE-VLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQRLIGEGIESILVSFAG-DGALFASA---------EGMFHVNV 236 (306)
T ss_dssp HH-HGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHHTTCCEEEEECGG-GCEEEEET---------TEEEEECC
T ss_pred HH-HHhcCCcEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC-CceEEEeC---------CCEEEEeC
Confidence 44 788 99999999999999999877777888899999999999999999995 89877643 44566666
Q ss_pred cccC-CCCCCccHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH
Q 021743 222 PKIP-AYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRT 268 (308)
Q Consensus 222 ~~~~-~~t~GaGD~f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~~t 268 (308)
++++ +|++||||+|+|+|+++|++ |.++++|+++|+++++.++.+.
T Consensus 237 ~~v~vvdttGAGDaF~a~~~~~l~~-g~~~~~a~~~A~a~aa~~v~~~ 283 (306)
T 2abq_A 237 PSGEVRNSVGAGDSVVAGFLAALQE-GKSLEDAVPFAVAAGSATAFSD 283 (306)
T ss_dssp CCCCCCCCSSHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHSS
T ss_pred CCccccCCccHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcCc
Confidence 6665 59999999999999999998 9999999999999998888753
No 13
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=99.88 E-value=1.6e-21 Score=176.12 Aligned_cols=173 Identities=18% Similarity=0.198 Sum_probs=135.5
Q ss_pred eeCCHHHHHHHHHHHHhCCCcccCE-EEEeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHH
Q 021743 65 QVLNGQQLCDLIEGLEANNLLYYTH-LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYR 143 (308)
Q Consensus 65 ~~~~~~~~~~~l~~l~~~~~~~~~~-v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~ 143 (308)
..+++++++.+++.+.... .+++ ++.|+++.....+.+.++++.++++ ++++++||+.. .++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~--~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~-------------~~~ 168 (306)
T 2jg5_A 106 PHITSTQFEQLLQQIKNTT--SEDIVIVAGSVPSSIPSDAYAQIAQITAQT--GAKLVVDAEKE-------------LAE 168 (306)
T ss_dssp CCCCHHHHHHHHHHHTTCC--TTCEEEEESCCCTTSCTTHHHHHHHHHHHH--CCEEEEECCHH-------------HHH
T ss_pred CCCCHHHHHHHHHHHHhcc--CCCEEEEeCCCCCCCChHHHHHHHHHHHHC--CCEEEEECChH-------------HHH
Confidence 3466677777666653211 3675 4468887544455677888888876 78999999421 234
Q ss_pred Hhhcc-cceEEcCCHHHHHHhhCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEec
Q 021743 144 EKVVP-VASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIP 222 (308)
Q Consensus 144 ~~ll~-~~diitpN~~E~~~L~g~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 222 (308)
+ +++ .+|+++||..|++.|+|....+.+++.++++.|.++|++.|++|+|+ +|+++... ++.++++.+
T Consensus 169 ~-~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~---------~~~~~~~~~ 237 (306)
T 2jg5_A 169 S-VLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVIVSLGG-DGAIYIDK---------EISIKAVNP 237 (306)
T ss_dssp H-HGGGCCSEECCBHHHHHHHTTSCCCSHHHHHHHHHHHHHTTCSCEEEECGG-GCEEEECS---------SEEEEEECC
T ss_pred H-HHhcCCeEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEccCC-CceEEEeC---------CcEEEEeCC
Confidence 4 666 69999999999999999877777888899999999999999999995 78876632 346667777
Q ss_pred ccC-CCCCCccHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHH
Q 021743 223 KIP-AYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 223 ~~~-~~t~GaGD~f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
+++ +|++||||+|+|+|+++|++ |.++++|+++|+++++.++.
T Consensus 238 ~v~vvdttGAGDaf~a~~~~~l~~-g~~~~~a~~~A~a~aa~~v~ 281 (306)
T 2jg5_A 238 QGKVVNTVGSGDSTVAGMVAGIAS-GLSIEKAFQQAVACGTATAF 281 (306)
T ss_dssp CCCCCCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHT
T ss_pred cccccCCcChHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHc
Confidence 766 59999999999999999998 99999999999998888774
No 14
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=99.87 E-value=1.5e-21 Score=179.47 Aligned_cols=165 Identities=14% Similarity=0.040 Sum_probs=131.2
Q ss_pred ccCEEEE-eccC--CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCC---hhhHHHHHHhhcccceEEcCCHHH
Q 021743 86 YYTHLLT-GYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVP---SELVSVYREKVVPVASMLTPNQFE 159 (308)
Q Consensus 86 ~~~~v~~-G~l~--~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~---~~~~~~l~~~ll~~~diitpN~~E 159 (308)
.++++.+ |+.+ ++...+.+.++++.++++ ++++++||+++. .+|.. ++..+.+++ +++++|+++||+.|
T Consensus 129 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~r~--~~~~~~~~~~~~~~~~~-ll~~~dil~~N~~E 203 (346)
T 3ktn_A 129 EVDMVHICGISLSLTEKTRDAALILAQKAHAY--QKKVCFDFNYRP--SLNTANSALFMRQQYER-ILPYCDIVFGSRRD 203 (346)
T ss_dssp TCSEEEECTHHHHHCHHHHHHHHHHHHHHHHT--TCEEEEECCCCG--GGCCHHHHHHHHHHHHH-HGGGCSEEECCHHH
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHHHHc--CCEEEEeCCCCh--HHcCCccHHHHHHHHHH-HHHhCCEEEccHHH
Confidence 3676665 6543 566678889999999887 789999998764 25543 445566665 89999999999999
Q ss_pred HHHhhCCC-CC---CHHHHHHHHHHHHH-cCCCeEEEeeeecCC-------cEEEEeeeccCCCCCCcEEEEEecccC-C
Q 021743 160 AEQLTGFR-IG---SEADGREACKILHA-AGPAKVVITSINIDG-------NLFLIGSHQKEKGQSPEQFKIVIPKIP-A 226 (308)
Q Consensus 160 ~~~L~g~~-~~---~~~d~~~~~~~l~~-~g~~~Vvit~g~~~g-------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 226 (308)
++.|+|.+ .. +.+++.++++.|.+ .|++.|+||.|. +| ++++.. ++.++++.++++ +
T Consensus 204 ~~~l~g~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G~-~G~~~~~~g~~~~~~---------~~~~~~~~~~v~vv 273 (346)
T 3ktn_A 204 LVELLGFIPREDLEGEAQETELIQRFMSQYNLEWFAGTTRS-HSQNQNYLSGYLYTQ---------NEYQQSEKRPLLNL 273 (346)
T ss_dssp HHHTSCCCCCTTSCHHHHHHHHHHHHHHHHTCSEEEEEEEE-ECSSCEEEEEEEECS---------SCEEECCCEECCCS
T ss_pred HHHHhCCCCCccccchHHHHHHHHHHHHhcCCCEEEEecCc-cccccCcceEEEEEC---------CceEEeCCCccccC
Confidence 99999986 32 45788889999987 499999999985 66 555432 455666666666 5
Q ss_pred CCCCccHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHH
Q 021743 227 YFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 227 ~t~GaGD~f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
|++||||+|+|+|+++|++ |.++++|+++|+++++.++.
T Consensus 274 dttGAGDaF~ag~~~~l~~-g~~l~~a~~~A~a~aa~~v~ 312 (346)
T 3ktn_A 274 DRIGAGDAYAAGILYGYSQ-NWSLEKAVTFATVNGVLAHT 312 (346)
T ss_dssp CCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHTT
T ss_pred CCCchhHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999998 99999999999998887775
No 15
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=99.87 E-value=1.8e-21 Score=177.85 Aligned_cols=173 Identities=16% Similarity=0.100 Sum_probs=133.7
Q ss_pred eCCHHHHHHHHHHHHhCCCcccCEEE-EeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHH
Q 021743 66 VLNGQQLCDLIEGLEANNLLYYTHLL-TGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYRE 144 (308)
Q Consensus 66 ~~~~~~~~~~l~~l~~~~~~~~~~v~-~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~ 144 (308)
.+++++++.+.+.+.+.- ..++++. .|+++.+...+.+.++++.++++ ++++++||+.. .+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~-~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~-------------~l~~ 191 (330)
T 2jg1_A 128 EIDNQEAAGFIKHFEQMM-EKVEAVAISGSLPKGLNQDYYAQIIERCQNK--GVPVILDCSGA-------------TLQT 191 (330)
T ss_dssp BCCHHHHHHHHHHHHHHG-GGCSEEEEESCCCBTSCTTHHHHHHHHHHTT--TCCEEEECCHH-------------HHHH
T ss_pred CCCHHHHHHHHHHHHHhc-CCCCEEEEECCCCCCCCHHHHHHHHHHHHHC--CCEEEEECCcH-------------HHHH
Confidence 466666666654442210 0367655 58877544456777888888876 78999999521 2343
Q ss_pred hhcc---cceEEcCCHHHHHHhhCCCCC-CHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEE
Q 021743 145 KVVP---VASMLTPNQFEAEQLTGFRIG-SEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIV 220 (308)
Q Consensus 145 ~ll~---~~diitpN~~E~~~L~g~~~~-~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~ 220 (308)
+++ .+|+++||++|++.|+|.+.. +.+++.++++.|.++|++.|+||.|. +|+++... ++.++++
T Consensus 192 -~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~l~~~g~~~VvvT~G~-~Ga~~~~~---------~~~~~~~ 260 (330)
T 2jg1_A 192 -VLENPYKPTVIKPNISELYQLLNQPLDESLESLKQAVSQPLFEGIEWIIVSLGA-QGAFAKHN---------HTFYRVN 260 (330)
T ss_dssp -HHTSSSCCSEECCBHHHHHHHTTSCCCCCHHHHHHHHHSGGGTTCSEEEEECGG-GCEEEEET---------TEEEEEE
T ss_pred -HHhccCCceEEEeCHHHHHHHhCCCCCCCHHHHHHHHHHHHHcCCCEEEEeecC-CceEEEeC---------CCEEEEe
Confidence 454 899999999999999998655 66788889999988999999999995 89877643 4556677
Q ss_pred ecccC-CCCCCccHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHH
Q 021743 221 IPKIP-AYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 221 ~~~~~-~~t~GaGD~f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
.++++ +||+||||+|+|+|+++|++ |.++++|+++|+++++.++.
T Consensus 261 ~~~v~vvDttGAGDaF~ag~~~~l~~-g~~l~~al~~A~a~aa~~v~ 306 (330)
T 2jg1_A 261 IPTISVLNPVGSGDSTVAGITSAILN-HENDHDLLKKANTLGMLNAQ 306 (330)
T ss_dssp CCCCCCSCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHT
T ss_pred CCCccccCCCcHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhc
Confidence 76666 59999999999999999998 99999999999998887775
No 16
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=99.87 E-value=2.8e-21 Score=174.77 Aligned_cols=174 Identities=18% Similarity=0.193 Sum_probs=135.3
Q ss_pred eCCHHHHHHHHHHHHhCCCcccCEE-EEeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHH
Q 021743 66 VLNGQQLCDLIEGLEANNLLYYTHL-LTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYRE 144 (308)
Q Consensus 66 ~~~~~~~~~~l~~l~~~~~~~~~~v-~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~ 144 (308)
.+++++++.+++.+.+.. .. +++ +.|+++.....+.+.++++.+++. ++++++||+.. .+++
T Consensus 112 ~~~~~~~~~~~~~~~~~~-~~-~~v~~~g~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~-------------~~~~ 174 (309)
T 3cqd_A 112 ALNEDEFRQLEEQVLEIE-SG-AILVISGSLPPGVKLEKLTQLISAAQKQ--GIRCIVDSSGE-------------ALSA 174 (309)
T ss_dssp CCCHHHHHHHHHHHHTSC-TT-CEEEEESCCCTTCCHHHHHHHHHHHHTT--TCEEEEECCHH-------------HHHH
T ss_pred CCCHHHHHHHHHHHHHhh-cC-CEEEEECCCCCCCCHHHHHHHHHHHHHc--CCeEEEECChH-------------HHHH
Confidence 455666666665554321 14 654 568887655667888889998876 78999999521 2343
Q ss_pred hhcccc-eEEcCCHHHHHHhhCCCCCCHHHHHHHHHHHHHcC-CCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEec
Q 021743 145 KVVPVA-SMLTPNQFEAEQLTGFRIGSEADGREACKILHAAG-PAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIP 222 (308)
Q Consensus 145 ~ll~~~-diitpN~~E~~~L~g~~~~~~~d~~~~~~~l~~~g-~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 222 (308)
.+.+.+ |+++||.+|++.|+|.+..+.+++.++++.|+++| ++.|++|.|. +|++++.. ++.++++.+
T Consensus 175 ~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~~vvvt~G~-~G~~~~~~---------~~~~~~~~~ 244 (309)
T 3cqd_A 175 ALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRVVVSLGP-QGALGVDS---------ENCIQVVPP 244 (309)
T ss_dssp HTTTCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHHHTTSBSCEEEECGG-GCEEEECS---------SCEEEECCC
T ss_pred HHHhCCCEEEeeCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCCEEEEEecC-CceEEEEC---------CceEEEeCC
Confidence 345788 99999999999999987666678888999999999 9999999995 88876632 346667666
Q ss_pred ccC-CCCCCccHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHH
Q 021743 223 KIP-AYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQR 267 (308)
Q Consensus 223 ~~~-~~t~GaGD~f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~~ 267 (308)
+++ +|++||||+|+|+|+++|++ |.++++|+++|+++++.++++
T Consensus 245 ~v~~vdttGAGDaf~a~~~~~l~~-g~~~~~a~~~A~~~aa~~~~~ 289 (309)
T 3cqd_A 245 PVKSQSTVGAGDSMVGAMTLKLAE-NASLEEMVRFGVAAGSAATLN 289 (309)
T ss_dssp SCCCCCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHTC-
T ss_pred ccccCCCcCcHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHcC
Confidence 665 59999999999999999998 999999999999998888764
No 17
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=99.87 E-value=1.8e-21 Score=177.30 Aligned_cols=174 Identities=18% Similarity=0.140 Sum_probs=133.8
Q ss_pred eCCHHHHHHHHHHHHhCCCcccCEEE-EeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHH
Q 021743 66 VLNGQQLCDLIEGLEANNLLYYTHLL-TGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYRE 144 (308)
Q Consensus 66 ~~~~~~~~~~l~~l~~~~~~~~~~v~-~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~ 144 (308)
.+++++++.+++.+.+.- ..++++. .|+++.....+.+.++++.+++. ++++++||+.. .+++
T Consensus 110 ~l~~~~~~~~~~~~~~~~-~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~-------------~~~~ 173 (323)
T 2f02_A 110 TVSPEEISNFLENFDQLI-KQAEIVTISGSLAKGLPSDFYQELVQKAHAQ--EVKVLLDTSGD-------------SLRQ 173 (323)
T ss_dssp BCCHHHHHHHHHHHHHHH-TTCSEEEEESCCCBTSCTTHHHHHHHHHHHT--TCEEEEECCTH-------------HHHH
T ss_pred CCCHHHHHHHHHHHHHhc-cCCCEEEEECCCCCCCChHHHHHHHHHHHHC--CCEEEEECChH-------------HHHH
Confidence 466667666555443210 0367665 58887644556777888888876 78999999521 2233
Q ss_pred hhc---ccceEEcCCHHHHHHhhCCCCC-CH-HHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEE
Q 021743 145 KVV---PVASMLTPNQFEAEQLTGFRIG-SE-ADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKI 219 (308)
Q Consensus 145 ~ll---~~~diitpN~~E~~~L~g~~~~-~~-~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~ 219 (308)
++ +++|+++||.+|++.|+|.+.. +. +++.++++.|.++|++.|+||.|. +|++++.. ++.+++
T Consensus 174 -~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~---------~~~~~~ 242 (323)
T 2f02_A 174 -VLQGPWKPYLIKPNLEELEGLLGQDFSENPLAAVQTALTKPMFAGIEWIVISLGK-DGAIAKHH---------DQFYRV 242 (323)
T ss_dssp -HHHSSCCCSEECCBHHHHHHHHTCCCCSSCHHHHHHHHTSGGGTTCSEEEEECGG-GCEEEEET---------TEEEEE
T ss_pred -HHhccCCCeEEecCHHHHHHHhCCCCCCCcHHHHHHHHHHHHHcCCCEEEEeecC-CceEEEeC---------CCEEEE
Confidence 34 5899999999999999998654 44 678888888988999999999995 88877643 456667
Q ss_pred EecccC-CCCCCccHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHH
Q 021743 220 VIPKIP-AYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQR 267 (308)
Q Consensus 220 ~~~~~~-~~t~GaGD~f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~~ 267 (308)
+.++++ +|++||||+|+|+|+++|++ |.++++|+++|+++++.++..
T Consensus 243 ~~~~v~vvdttGAGDaF~a~~~~~l~~-g~~~~~a~~~A~~~aa~~v~~ 290 (323)
T 2f02_A 243 KIPTIQAKNPVGSGDATIAGLAYGLAK-DAPAAELLKWGMAAGMANAQE 290 (323)
T ss_dssp ECCCCCCSCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHS
T ss_pred cCCCccccCCccHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHcC
Confidence 777766 59999999999999999998 999999999999988888763
No 18
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=99.87 E-value=2.3e-21 Score=177.65 Aligned_cols=161 Identities=17% Similarity=0.137 Sum_probs=125.0
Q ss_pred cCEEE-EeccC--CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhh-HHHHHHhhcccceEEcCCHHHHHH
Q 021743 87 YTHLL-TGYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSEL-VSVYREKVVPVASMLTPNQFEAEQ 162 (308)
Q Consensus 87 ~~~v~-~G~l~--~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~-~~~l~~~ll~~~diitpN~~E~~~ 162 (308)
++.+. .|+.+ ++...+.+.++++.++++ ++++++||+++. .+|...+. .+.+++ +++++|+++||+.|++.
T Consensus 153 ~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~--~~~~~~~~~~~~~~~-ll~~~dil~pN~~Ea~~ 227 (336)
T 4du5_A 153 ARHLHATGVFPAISATTLPAARKTMDLMRAA--GRSVSFDPNLRP--TLWATPELMRDAIND-LATRADWVLPGMEEGRF 227 (336)
T ss_dssp EEEEEEESSGGGSCTTHHHHHHHHHHHHHHT--TCEEEEECCCCG--GGSSSHHHHHHHHHH-HHTTCSEECCBHHHHHH
T ss_pred CCEEEEcCchhhCChHHHHHHHHHHHHHHHC--CCEEEEeCcCCc--hhcCChHHHHHHHHH-HHHhCCEEECCHHHHHH
Confidence 56555 67654 566678888999999887 789999998764 35544433 444554 89999999999999999
Q ss_pred hhCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC--CCCCCccHHHHHHHH
Q 021743 163 LTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP--AYFTGTGDLMTALLL 240 (308)
Q Consensus 163 L~g~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~t~GaGD~f~a~l~ 240 (308)
|+|.+ +.+++++.|.++|++.|+||.|. +|.+++.. ++.++++.++++ +|++||||+|+|+|+
T Consensus 228 l~g~~-----~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~---------~~~~~~~~~~v~~vvdttGAGDaf~a~~~ 292 (336)
T 4du5_A 228 LTGET-----TPEGVARFYRQLGAKLVVVKLGA-EGAYFDGE---------AGSGRVAGFPVAEVVDTVGAGDGFAVGVI 292 (336)
T ss_dssp HHCCC-----SHHHHHHHHHHTTCSEEEEECGG-GCEEEEET---------TEEEEECCCCC-------CHHHHHHHHHH
T ss_pred HhCCC-----CHHHHHHHHHhcCCCEEEEEecC-CceEEEEC---------CeEEEeCCccCCCCCCCccchHHHHHHHH
Confidence 99973 45677888889999999999995 88877643 456677777775 599999999999999
Q ss_pred HHHccCCCCHHHHHHHHHHHHHHHHHHH
Q 021743 241 GWSNKYRDNLDIAAELAVSSLQALLQRT 268 (308)
Q Consensus 241 ~~l~~~g~~~~~A~~~A~a~~~~~i~~t 268 (308)
++|++ |.++++|+++|+++++.++...
T Consensus 293 ~~l~~-g~~l~~a~~~A~~~aa~~v~~~ 319 (336)
T 4du5_A 293 SALLD-GLGVPEAVKRGAWIGARAVQVL 319 (336)
T ss_dssp HHHHT-TCCHHHHHHHHHHHHHHHHC--
T ss_pred HHHHc-CCCHHHHHHHHHHHHHHHhccC
Confidence 99998 9999999999999988887643
No 19
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=99.87 E-value=3.9e-21 Score=173.81 Aligned_cols=168 Identities=20% Similarity=0.242 Sum_probs=130.2
Q ss_pred eCCHHHHHHHHHHHHhCCCcccCEEEEeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHh
Q 021743 66 VLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREK 145 (308)
Q Consensus 66 ~~~~~~~~~~l~~l~~~~~~~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ 145 (308)
.+++++++.+.+.+. .++++.+..... .+.+.++++.+++. ++++++||++.+ .+ .. .
T Consensus 119 ~l~~~~~~~~~~~~~-----~~~~v~~~~~~~---~~~~~~~~~~a~~~--g~~v~~D~~~~~---~~--------~~-~ 176 (309)
T 1rkd_A 119 ALSPALVEAQRERIA-----NASALLMQLESP---LESVMAAAKIAHQN--KTIVALNPAPAR---EL--------PD-E 176 (309)
T ss_dssp GCCHHHHHTTHHHHH-----HCSEEEECSSSC---HHHHHHHHHHHHHT--TCEEEECCCSCC---CC--------CH-H
T ss_pred cCCHHHHHHHHHhcc-----cCCEEEEeCCCC---HHHHHHHHHHHHHc--CCEEEEECCccc---cc--------hH-H
Confidence 445555554444454 367776643222 35666778888876 789999998752 11 12 3
Q ss_pred hcccceEEcCCHHHHHHhhCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC
Q 021743 146 VVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP 225 (308)
Q Consensus 146 ll~~~diitpN~~E~~~L~g~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (308)
+++++|+++||..|++.|+|.+..+.+++.++++.|.++|++.|+||+|. +|.++... ++.++++.++++
T Consensus 177 ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~---------~~~~~~~~~~v~ 246 (309)
T 1rkd_A 177 LLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGS-RGVWASVN---------GEGQRVPGFRVQ 246 (309)
T ss_dssp HHTTCSEECCCHHHHHHHHSCCCSSHHHHHHHHHHHHHTTCSEEEEECGG-GCEEEEET---------TEEEEECCCCCC
T ss_pred HHhhCCEEEcCHHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCEEEEEECC-CcEEEEeC---------CceEEcCCCCCC
Confidence 78899999999999999999877777888899999999999999999995 78876643 455666666665
Q ss_pred -CCCCCccHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHH
Q 021743 226 -AYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 226 -~~t~GaGD~f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
+|++||||+|+|+|+++|++ |.++++|+++|+++++.++.
T Consensus 247 ~vdt~GAGD~f~a~~~~~l~~-g~~~~~a~~~a~~~aa~~~~ 287 (309)
T 1rkd_A 247 AVDTIAAGDTFNGALITALLE-EKPLPEAIRFAHAAAAIAVT 287 (309)
T ss_dssp CSCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHT
T ss_pred cCCCCChHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHcC
Confidence 59999999999999999998 99999999999998888775
No 20
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=99.86 E-value=1.9e-21 Score=176.85 Aligned_cols=171 Identities=19% Similarity=0.180 Sum_probs=130.9
Q ss_pred HHHHHHHHHHHhCCCcccCEEEE-eccC---CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChh-hHHHHHH
Q 021743 70 QQLCDLIEGLEANNLLYYTHLLT-GYIG---SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSE-LVSVYRE 144 (308)
Q Consensus 70 ~~~~~~l~~l~~~~~~~~~~v~~-G~l~---~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~-~~~~l~~ 144 (308)
++++...+.+. .++++.+ |+.+ ++...+.+.++++.++++ ++++++||++++ .+|.+.+ ..+.++
T Consensus 118 ~~~~~~~~~l~-----~~~~v~~~g~~~~~l~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~--~~~~~~~~~~~~~~- 187 (319)
T 3lhx_A 118 EQSAAICEELA-----NFDYLYLSGISLAILSPTSREKLLSLLRECRAK--GGKVIFDNNYRP--RLWASKEETQQVYQ- 187 (319)
T ss_dssp SSHHHHHHHHT-----TCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHT--TCEEEEECCCCG--GGSSCHHHHHHHHH-
T ss_pred cchhhHHHHhc-----CCCEEEEcCchhhhcCchhHHHHHHHHHHHHhc--CCEEEEeCcCCc--ccccCHHHHHHHHH-
Confidence 34455545554 3676655 4432 466678889999999887 789999998764 3554443 344445
Q ss_pred hhcccceEEcCCHHHHHHhhCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCc-EEEEEec-
Q 021743 145 KVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPE-QFKIVIP- 222 (308)
Q Consensus 145 ~ll~~~diitpN~~E~~~L~g~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~- 222 (308)
.+++.+|+++||..|++.|+|.+ +..++++.|.++|++.|+||+|. +|+++... ++ .++++..
T Consensus 188 ~ll~~~di~~~n~~E~~~l~g~~-----~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~---------~~~~~~~~~~~ 252 (319)
T 3lhx_A 188 QMLECTDIAFLTLDDEDALWGQQ-----PVEDVIARTHNAGVKEVVVKRGA-DSCLVSIA---------GEALVDVPAVK 252 (319)
T ss_dssp HHHTTCSEEEEEHHHHHHHHCCC-----CHHHHHHHHHHTTCSEEEEEETT-EEEEEEET---------TSCCEEECCCC
T ss_pred HHHhhCCcccCCHHHHHHHhCCC-----CHHHHHHHHHhcCCCEEEEEECC-CCeEEEEC---------CcceEEccccc
Confidence 48999999999999999999973 56678888999999999999995 78877643 23 3356543
Q ss_pred --ccC-CCCCCccHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHH
Q 021743 223 --KIP-AYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 223 --~~~-~~t~GaGD~f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
+.+ +||+||||+|+|+|+++|++ |.++++|+++|+++++.+++
T Consensus 253 ~~~~~vvdttGAGDaf~a~~~~~l~~-g~~~~~a~~~A~~~aa~~v~ 298 (319)
T 3lhx_A 253 LPKEKVIDTTAAGDSFSAGYLAVRLT-GGSAENAAKRGHLTASTVIQ 298 (319)
T ss_dssp CCGGGCCCCTTHHHHHHHHHHHHHTT-TCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCccCCCCCccHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHhhhc
Confidence 444 59999999999999999998 99999999999998888775
No 21
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=99.86 E-value=3e-21 Score=176.44 Aligned_cols=169 Identities=22% Similarity=0.184 Sum_probs=131.9
Q ss_pred eCCHHHHHHHHHHHHhCCCcccCEEEEeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHh
Q 021743 66 VLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREK 145 (308)
Q Consensus 66 ~~~~~~~~~~l~~l~~~~~~~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ 145 (308)
.+++++++...+.+. .+++++++...+. +.+.++++.+++. ++++++||++++. .+ .+.
T Consensus 139 ~l~~~~~~~~~~~l~-----~~~~v~~~~~~~~---~~~~~~~~~a~~~--g~~v~~Dp~~~~~--~~---------~~~ 197 (331)
T 2fv7_A 139 LLNTEDLRAAANVIS-----RAKVMVCQLEITP---ATSLEALTMARRS--GVKTLFNPAPAIA--DL---------DPQ 197 (331)
T ss_dssp GCCHHHHHHTHHHHH-----HCSEEEECSSSCH---HHHHHHHHHHHHT--TCEEEECCCSCCT--TC---------CTH
T ss_pred cCCHHHHHHHHHhhc-----cCCEEEEecCCCH---HHHHHHHHHHHHc--CCEEEEeCCcccc--cc---------hHH
Confidence 345555555444454 3777777654333 5566778888876 7899999987631 11 113
Q ss_pred hcccceEEcCCHHHHHHhhCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCC--cEEEEEecc
Q 021743 146 VVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSP--EQFKIVIPK 223 (308)
Q Consensus 146 ll~~~diitpN~~E~~~L~g~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~ 223 (308)
+++++|+++||..|++.|+|.+..+.+++.+++++|.++|++.|+||+|. +|.+++.. + +.++++.++
T Consensus 198 ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~g~~~VvvT~G~-~G~~~~~~---------~~~~~~~~~~~~ 267 (331)
T 2fv7_A 198 FYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIITLGA-EGCVVLSQ---------TEPEPKHIPTEK 267 (331)
T ss_dssp HHHTCSEEEEEHHHHHHHHSSCCCSHHHHHHHHHHHHTTTCSEEEEECGG-GCEEEEES---------SCCSCEEECCCC
T ss_pred HHhcCCEEEeCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEEECC-CceEEEEC---------CCCceeEecCCC
Confidence 77899999999999999999877777888899999999999999999995 78877643 3 456676666
Q ss_pred cC-CCCCCccHHHHHHHHHHHccCC--CCHHHHHHHHHHHHHHHHH
Q 021743 224 IP-AYFTGTGDLMTALLLGWSNKYR--DNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 224 ~~-~~t~GaGD~f~a~l~~~l~~~g--~~~~~A~~~A~a~~~~~i~ 266 (308)
++ +|++||||+|+|+|+++|++ | .++++|+++|+++++.+++
T Consensus 268 v~vvdttGAGDaf~a~~~~~l~~-g~~~~~~~a~~~A~~~aa~~v~ 312 (331)
T 2fv7_A 268 VKAVDTTGAGDSFVGALAFYLAY-YPNLSLEDMLNRSNFIAAVSVQ 312 (331)
T ss_dssp CCCSCCTTHHHHHHHHHHHHHHH-CTTSCHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCCchHHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHHHhC
Confidence 65 59999999999999999999 9 9999999999999888876
No 22
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=99.86 E-value=1.5e-21 Score=178.32 Aligned_cols=159 Identities=16% Similarity=0.186 Sum_probs=129.7
Q ss_pred cCEE-EEeccC-CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhh
Q 021743 87 YTHL-LTGYIG-SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (308)
Q Consensus 87 ~~~v-~~G~l~-~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~ 164 (308)
++++ +.|+++ ++...+.+.++++.++++ ++++++||+.++ .+|.+++..+.+++ +++++|+++||+.|++.|+
T Consensus 131 ~~~v~~sg~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~--~~~~~~~~~~~~~~-~l~~~dil~~N~~E~~~l~ 205 (330)
T 3iq0_A 131 CTHFHIMGSSLFSFHMVDAVKKAVTIVKAN--GGVISFDPNIRK--EMLDIPEMRDALHF-VLELTDIYMPSEGEVLLLS 205 (330)
T ss_dssp EEEEEEEGGGCSSHHHHHHHHHHHHHHHHT--TCEEEEECCCCG--GGGGSHHHHHHHHH-HHHTCSEECCBGGGTTTTC
T ss_pred CCEEEEechhhcCcchHHHHHHHHHHHHHc--CCEEEEcCCCCc--cccCcHHHHHHHHH-HHhhCCEEecCHHHHHHHh
Confidence 5654 457765 566678888999999887 789999998764 35555556666665 8899999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC-CCCCCccHHHHHHHHHHH
Q 021743 165 GFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGWS 243 (308)
Q Consensus 165 g~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~GaGD~f~a~l~~~l 243 (308)
|.+ +..++++.|.++|++.|+||.|. +|++++.. ++.++++.++++ +|++||||+|+|+|+++|
T Consensus 206 g~~-----~~~~~~~~l~~~g~~~vvvT~G~-~G~~~~~~---------~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l 270 (330)
T 3iq0_A 206 PHS-----TPERAIAGFLEEGVKEVIVKRGN-QGASYYSA---------NEQFHVESYPVEEVDPTGAGDCFGGAWIACR 270 (330)
T ss_dssp SCS-----SHHHHHHHHHHHTCSEEEEECGG-GCEEEECS---------SCEEEECCCCCCCSCCTTHHHHHHHHHHHHH
T ss_pred CCC-----CHHHHHHHHHHcCCCEEEEEeCC-CceEEEEC---------CceEEecCCCCccCCCCChHHHHHHHHHHHH
Confidence 973 56678888888999999999995 89877643 456677766666 599999999999999999
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHH
Q 021743 244 NKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 244 ~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
++ |.++++|+++|+++++.++.
T Consensus 271 ~~-g~~~~~a~~~A~~~aa~~v~ 292 (330)
T 3iq0_A 271 QL-GFDAHRALQYANACGALAVT 292 (330)
T ss_dssp HT-TCCHHHHHHHHHHHHHHHTT
T ss_pred Hc-CCCHHHHHHHHHHHHHHHHc
Confidence 98 99999999999998887775
No 23
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=99.86 E-value=5e-21 Score=174.83 Aligned_cols=160 Identities=18% Similarity=0.158 Sum_probs=127.8
Q ss_pred ccCEEEE-ecc---CCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCCh-hhHHHHHHhhcccceEEcCCHHHH
Q 021743 86 YYTHLLT-GYI---GSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPS-ELVSVYREKVVPVASMLTPNQFEA 160 (308)
Q Consensus 86 ~~~~v~~-G~l---~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~-~~~~~l~~~ll~~~diitpN~~E~ 160 (308)
.++++.+ |+. .++...+.+.++++.++++ ++++++||++++ .+|.+. +..+.+++ +++.+|+++||..|+
T Consensus 145 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~--~~~~~~~~~~~~~~~-ll~~~dil~~N~~E~ 219 (328)
T 4e69_A 145 RADVVYFSGITLAILDQCGRATLLRALAQARAT--GRTIAFDPNLRP--RLWAGTGEMTETIMQ-GAAVSDIALPSFEDE 219 (328)
T ss_dssp TCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHT--TCEEEEECCCCG--GGCSCHHHHHHHHHH-HHTTCSEECCBHHHH
T ss_pred CCCEEEECCchhhccCchHHHHHHHHHHHHHhC--CCEEEEeCCCCh--hhcCCHHHHHHHHHH-HHHhCCEEeCCHHHH
Confidence 3676655 542 2566788889999999886 789999998764 255433 34455554 899999999999999
Q ss_pred HHhhCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecc-cC-CCCCCccHHHHHH
Q 021743 161 EQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPK-IP-AYFTGTGDLMTAL 238 (308)
Q Consensus 161 ~~L~g~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~t~GaGD~f~a~ 238 (308)
+.|+|.+ ++.++++.|.++|++.|+||+|. +|+++... ++.++++.++ .+ +|++||||+|+|+
T Consensus 220 ~~l~g~~-----~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~---------~~~~~~~~~~~~~vvdttGAGDaf~a~ 284 (328)
T 4e69_A 220 AAWFGDA-----GPDATADRYARAGVRSVVVKNGP-HAVHFLQD---------GRRGRVPVPPVAQVVDTTAAGDSFNAG 284 (328)
T ss_dssp HHHHTCS-----SHHHHHHHHHTTTCSEEEEBCTT-SCEEEEET---------TEEEEECCCCCCSCCCCTTHHHHHHHH
T ss_pred HHHcCCC-----CHHHHHHHHHhcCCCEEEEEeCC-CCeEEEeC---------CceEEecCCCCCCccCCCChhHHHHHH
Confidence 9999974 56778888989999999999995 89877643 4556666543 44 5999999999999
Q ss_pred HHHHHccCCCCHHHHHHHHHHHHHHHHH
Q 021743 239 LLGWSNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 239 l~~~l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
|+++|++ |.++++|+++|+++++.+++
T Consensus 285 ~~~~l~~-g~~l~~a~~~A~~~aa~~v~ 311 (328)
T 4e69_A 285 LLDSVLA-GQPLETAIAAAAALAGQVVQ 311 (328)
T ss_dssp HHHHHHT-TCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHC-CCCHHHHHHHHHHHHHHHHc
Confidence 9999998 99999999999998888775
No 24
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.86 E-value=2e-21 Score=174.67 Aligned_cols=161 Identities=19% Similarity=0.170 Sum_probs=126.4
Q ss_pred ccCEEEEeccC--CHhHHHHHHHHHHHHHh-cCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHH
Q 021743 86 YYTHLLTGYIG--SVSFLNTILQVVEKLRS-INPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQ 162 (308)
Q Consensus 86 ~~~~v~~G~l~--~~~~~~~~~~~l~~~k~-~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~ 162 (308)
.++++.+|+++ ++...+.+.++++.+++ + +.++++||++++. .| +. +.+++ +++++|+++||+.|++.
T Consensus 114 ~~~~v~~g~~~~~~~~~~~~~~~~~~~a~~~~--~~~v~~D~~~~~~--~~-~~---~~~~~-~l~~~dil~~N~~E~~~ 184 (296)
T 2qhp_A 114 NTRAVCFGSLAQRNEVSRATINRFLDTMPDID--GQLKIFDINLRQD--FY-TK---EVLRE-SFKRCNILKINDEELVT 184 (296)
T ss_dssp TEEEEEECSGGGSSHHHHHHHHHHHHHSCCTT--SCEEEEECCCCTT--CC-CH---HHHHH-HHHHCSEEEEEHHHHHH
T ss_pred CCCEEEECChHhcChHHHHHHHHHHHHHHhcC--CCEEEEECcCCcc--cc-CH---HHHHH-HHHHCCEEECCHHHHHH
Confidence 37788888764 45567788888888765 3 6799999988742 23 22 33444 78899999999999999
Q ss_pred hhCCCCCCHHHHHHHHHHHHHc-CCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC-CCCCCccHHHHHHHH
Q 021743 163 LTGFRIGSEADGREACKILHAA-GPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLL 240 (308)
Q Consensus 163 L~g~~~~~~~d~~~~~~~l~~~-g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~GaGD~f~a~l~ 240 (308)
|+|....+.+++++++++|.++ |++.|+||.|. +|++++.. ++.++++.++++ +||+||||+|+|+|+
T Consensus 185 l~g~~~~~~~~~~~~~~~l~~~~g~~~vvvt~G~-~G~~~~~~---------~~~~~~~~~~v~~vdttGAGD~f~a~~~ 254 (296)
T 2qhp_A 185 ISRMFGYPGIDLQDKCWILLAKYNLKMLILTCGI-NGSYVFTP---------GVVSFQETPKVPVADTVGAGDSFTAAFC 254 (296)
T ss_dssp HHHHTTCTTSCHHHHHHHHHHHTTCSEEEEECGG-GCEEEEET---------TEEEEECCCCCCCSCCTTHHHHHHHHHH
T ss_pred HhcccCCCCCCHHHHHHHHHHhcCCCEEEEeecC-CCeEEEEC---------CeEEEeCCCCCccccCCCchHHHHHHHH
Confidence 9986543334567788888874 99999999995 78877643 456667766666 599999999999999
Q ss_pred HHHccCCCCHHHHHHHHHHHHHHHHH
Q 021743 241 GWSNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 241 ~~l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
++|++ |.++++|+++|+++++.++.
T Consensus 255 ~~l~~-g~~~~~a~~~a~~~aa~~v~ 279 (296)
T 2qhp_A 255 ASILN-GKSVPEAHKLAVEVSAYVCT 279 (296)
T ss_dssp HHHHH-TCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHc-CCCHHHHHHHHHHHHHHHHc
Confidence 99999 99999999999998887775
No 25
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=99.86 E-value=4.2e-21 Score=173.18 Aligned_cols=168 Identities=18% Similarity=0.261 Sum_probs=132.2
Q ss_pred eCCHHHHHHHHHHHHhCCCcccCEEEEeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHh
Q 021743 66 VLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREK 145 (308)
Q Consensus 66 ~~~~~~~~~~l~~l~~~~~~~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ 145 (308)
.+++++++.+.+.+. .++++.++. ....+.+.++++.++++ +.++++||..... .+. .
T Consensus 118 ~~~~~~~~~~~~~~~-----~~~~v~~~~---~~~~~~~~~~~~~a~~~--~~~v~~D~~~~~~-----------~~~-~ 175 (304)
T 3ry7_A 118 TMTPEDVINAKDAII-----NADFVVAQL---EVPIPAIISAFEIAKAH--GVTTVLNPAPAKA-----------LPN-E 175 (304)
T ss_dssp GCCHHHHHTTHHHHH-----TCSEEEEET---TSCHHHHHHHHHHHHHT--TCEEEEECCSCCC-----------CCH-H
T ss_pred cCCHHHHHHHHHHhc-----cCCEEEEcC---CCCHHHHHHHHHHHHHc--CCEEEEeCCcccc-----------ccH-H
Confidence 455566665555555 367776654 22345677788888876 7899999964310 113 3
Q ss_pred hcccceEEcCCHHHHHHhhCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC
Q 021743 146 VVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP 225 (308)
Q Consensus 146 ll~~~diitpN~~E~~~L~g~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (308)
+++++|+++||+.|++.|+|.+..+.+++.+++++|+++|++.|++|.|. +|.++... ++.++++.++++
T Consensus 176 ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~---------~~~~~~~~~~v~ 245 (304)
T 3ry7_A 176 LLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLSIGIKTVLITLGK-QGTYFATK---------NQSQHIEAYKVN 245 (304)
T ss_dssp HHTTCSEECCBHHHHHHHHSCCCCSHHHHHHHHHHHHHTTCCEEEEECGG-GCEEEECS---------SCEEEECCSSCC
T ss_pred HHHhCCEEecCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEEeCC-CceEEEEC---------CeeEEecCCCcc
Confidence 78999999999999999999988788889999999999999999999995 88877643 456677766666
Q ss_pred -CCCCCccHHHHHHHHHHHccCC-CCHHHHHHHHHHHHHHHHH
Q 021743 226 -AYFTGTGDLMTALLLGWSNKYR-DNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 226 -~~t~GaGD~f~a~l~~~l~~~g-~~~~~A~~~A~a~~~~~i~ 266 (308)
+|++||||+|+|+|+++|++ | .++++|+++|+++++.+++
T Consensus 246 ~vdttGAGDaf~a~~~~~l~~-g~~~~~~a~~~A~~~aa~~~~ 287 (304)
T 3ry7_A 246 AIDTTAAGDTFIGAFVSRLNK-SQDNLADAIDFGNKASSLTVQ 287 (304)
T ss_dssp SSCCSSHHHHHHHHHHHHCCT-TCTTHHHHHHHHHHHHHTTSC
T ss_pred cCCCCCchHHHHHHHHHHHHc-CCCCHHHHHHHHHHHHHHHhC
Confidence 59999999999999999998 9 9999999999998776664
No 26
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.86 E-value=6.7e-21 Score=175.44 Aligned_cols=164 Identities=13% Similarity=0.063 Sum_probs=128.2
Q ss_pred cCEEEE-eccC--CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHh
Q 021743 87 YTHLLT-GYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQL 163 (308)
Q Consensus 87 ~~~v~~-G~l~--~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L 163 (308)
++++.+ |+++ ++...+.+.++++.++++ ++++++||+++. .+|..++..+.+++ +++++|+++||..|++.|
T Consensus 139 ~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~--~~~~~~~~~~~~~~-ll~~~dil~~N~~E~~~l 213 (351)
T 2afb_A 139 ARWFHFSGITPPLGKELPLILEDALKVANEK--GVTVSCDLNYRA--RLWTKEEAQKVMIP-FMEYVDVLIANEEDIEKV 213 (351)
T ss_dssp EEEEEEETTSGGGSTTHHHHHHHHHHHHHHH--TCEEEEECCCCT--TTCCHHHHHHHHHH-HGGGCSEEEECHHHHHHH
T ss_pred CCEEEEeCcccccChhHHHHHHHHHHHHHHc--CCEEEEeCCCch--hcCChHHHHHHHHH-HHhhCCEEEecHHHHHHH
Confidence 676655 5554 345567888899999887 789999999763 34533344455554 899999999999999999
Q ss_pred hCCCCC---------CHHHHHHHHHHHHHc-CCCeEEEeeeecCCc--------EEEEeeeccCCCCCCcEEEEEecccC
Q 021743 164 TGFRIG---------SEADGREACKILHAA-GPAKVVITSINIDGN--------LFLIGSHQKEKGQSPEQFKIVIPKIP 225 (308)
Q Consensus 164 ~g~~~~---------~~~d~~~~~~~l~~~-g~~~Vvit~g~~~g~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (308)
+|.... +.+++.++++.|.+. |++.|+||.|. +|+ +++.. ++.++++.++++
T Consensus 214 ~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G~-~G~~~~~~~g~~~~~~---------~~~~~~~~~~v~ 283 (351)
T 2afb_A 214 LGISVEGLDLKTGKLNREAYAKIAEEVTRKYNFKTVGITLRE-SISATVNYWSVMVFEN---------GQPHFSNRYEIH 283 (351)
T ss_dssp HCCCCSCC-------CHHHHHHHHHHHHHHHCCSEEEEEEEE-CSCSSEEEEEEEEEET---------TEEEECCCEEEE
T ss_pred hCCCcccccccccccchhhHHHHHHHHHHHcCCCEEEEEeCC-cCccccccceeEEEeC---------CcEEEcCCCCCc
Confidence 998754 567788889998874 99999999996 664 44422 345556655665
Q ss_pred -CCCCCccHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHH
Q 021743 226 -AYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 226 -~~t~GaGD~f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
+||+||||+|+|+|+++|++ |.++++|+++|+++++.++.
T Consensus 284 vvdttGAGDaF~ag~~~~l~~-g~~l~~a~~~A~~~aa~~v~ 324 (351)
T 2afb_A 284 IVDRVGAGDSFAGALIYGSLM-GFDSQKKAEFAAAASCLKHT 324 (351)
T ss_dssp CSCCTTHHHHHHHHHHHHHHH-TCCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCchHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhC
Confidence 59999999999999999999 99999999999998887775
No 27
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=99.86 E-value=4.3e-21 Score=174.44 Aligned_cols=171 Identities=12% Similarity=0.142 Sum_probs=131.6
Q ss_pred eeeCCHHHHHHHHHHHHhCCCcccCEEEE-eccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHH
Q 021743 64 GQVLNGQQLCDLIEGLEANNLLYYTHLLT-GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVY 142 (308)
Q Consensus 64 g~~~~~~~~~~~l~~l~~~~~~~~~~v~~-G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l 142 (308)
+..++.++++.+++.+.+... .++++.+ |+++.....+.+.++++.++++ ++++++||... .+
T Consensus 112 g~~~~~~~~~~~~~~~~~~~~-~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~-------------~l 175 (320)
T 3ie7_A 112 GFTVSQTNKDNLLKQIAKKVK-KEDMVVIAGSPPPHYTLSDFKELLRTVKAT--GAFLGCDNSGE-------------YL 175 (320)
T ss_dssp CCCCCHHHHHHHHHHHHHHCC-TTCEEEEESCCCTTCCHHHHHHHHHHHHHH--TCEEEEECCHH-------------HH
T ss_pred CCCCCHHHHHHHHHHHHHHhc-CCCEEEEeCCCCCCCCHHHHHHHHHHHHhc--CCEEEEECChH-------------HH
Confidence 445677788877776654321 4787766 9988766678888999999887 78999999421 23
Q ss_pred HHhhcccceEEcCCHHHHHHhhCCCCC-CHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEe
Q 021743 143 REKVVPVASMLTPNQFEAEQLTGFRIG-SEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVI 221 (308)
Q Consensus 143 ~~~ll~~~diitpN~~E~~~L~g~~~~-~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~ 221 (308)
++.+.+.+|+++||++|++.|+|.+.. +.+++.++ .+. ++.|+||.|. +|+++... ++.++++.
T Consensus 176 ~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~----~~~-~~~vvvt~G~-~G~~~~~~---------~~~~~~~~ 240 (320)
T 3ie7_A 176 NLAVEMGVDFIKPNEDEVIAILDEKTNSLEENIRTL----AEK-IPYLVVSLGA-KGSICAHN---------GKLYQVIP 240 (320)
T ss_dssp HHHHHHCCSEECCBTTGGGGGSCTTCCCHHHHHHHH----TTT-CSEEEEECGG-GCEEEEET---------TEEEEEEC
T ss_pred HHHHhcCCeEEeeCHHHHHHHhCCCcCCCHHHHHHH----Hhh-CCEEEEEcCC-CceEEEeC---------CcEEEEeC
Confidence 442334899999999999999998765 34444333 333 8899999995 89887653 45677777
Q ss_pred cccC-CCCCCccHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHH
Q 021743 222 PKIP-AYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 222 ~~~~-~~t~GaGD~f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
++++ +|++||||+|+|+|+++|++ |.++++|+++|+++++.++.
T Consensus 241 ~~v~vvdttGAGDaF~ag~~~~l~~-g~~~~~a~~~A~a~aa~~v~ 285 (320)
T 3ie7_A 241 PKVQERNDTGAGDVFVGAFIAGLAM-NMPITETLKVATGCSASKVM 285 (320)
T ss_dssp CCCCCSCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCCcCchHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHh
Confidence 7776 59999999999999999998 99999999999998888775
No 28
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=99.85 E-value=1.3e-20 Score=171.95 Aligned_cols=166 Identities=20% Similarity=0.170 Sum_probs=127.1
Q ss_pred CCHHHHHHHHHHHHhCCCcccCEEEE-eccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHh
Q 021743 67 LNGQQLCDLIEGLEANNLLYYTHLLT-GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREK 145 (308)
Q Consensus 67 ~~~~~~~~~l~~l~~~~~~~~~~v~~-G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ 145 (308)
++.+.++...+.+. .++++.+ |.++ +.+..+++ +++. ++++++||+... ..+.++ .
T Consensus 122 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~-----~~~~~l~~-a~~~--~~~v~~D~~~~~---------~~~~~~-~ 178 (328)
T 3kzh_A 122 MNTDFIDSKREIFE-----NAEYTVLDSDNP-----EIMEYLLK-NFKD--KTNFILDPVSAE---------KASWVK-H 178 (328)
T ss_dssp CCHHHHHHTHHHHH-----TCSEEEEESSCH-----HHHHHHHH-HHTT--TSEEEEECCSHH---------HHHTST-T
T ss_pred CCHHHHHHHHHhhc-----cCCEEEEeCCcH-----HHHHHHHH-Hhhc--CCcEEEEeCCHH---------HHHHHH-H
Confidence 34444444444444 3666554 4443 44455555 5554 789999996431 122233 3
Q ss_pred hcccceEEcCCHHHHHHhhCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC
Q 021743 146 VVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP 225 (308)
Q Consensus 146 ll~~~diitpN~~E~~~L~g~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (308)
+++.+|+++||+.|++.|+|.+..+.+++.++++.|.++|++.|+||.|. +|+++... ++.++++.++++
T Consensus 179 ~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~---------~~~~~~~~~~v~ 248 (328)
T 3kzh_A 179 LIKDFHTIKPNRHEAEILAGFPITDTDDLIKASNYFLGLGIKKVFISLDA-DGIFYNDG---------VSCGKIKATEVD 248 (328)
T ss_dssp TGGGCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHHHTCCEEEEECGG-GCEEEECS---------SCEEEEEESSCC
T ss_pred HhcCCcEEeCCHHHHHHHHCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCC-CCEEEEeC---------CceEEecCCCcc
Confidence 78999999999999999999988778899999999999999999999995 89877643 456677777776
Q ss_pred -CCCCCccHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHH
Q 021743 226 -AYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 226 -~~t~GaGD~f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
+|++||||+|+|+|+++|++ |.++++|+++|+++++.+++
T Consensus 249 vvdttGAGDaf~ag~~~~l~~-g~~~~~a~~~A~a~aa~~v~ 289 (328)
T 3kzh_A 249 VKNVTGAGDSFVAGLGYGYMN-KMPIEDIVKFAMTMSNITIS 289 (328)
T ss_dssp CSCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHT
T ss_pred cCCCCChhHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhc
Confidence 59999999999999999998 99999999999998888775
No 29
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=99.84 E-value=1.2e-20 Score=172.38 Aligned_cols=164 Identities=16% Similarity=0.140 Sum_probs=125.9
Q ss_pred cCEEE-EeccCC-HhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChh-hHHHHHHhhcccceEEcCCHHHHHHh
Q 021743 87 YTHLL-TGYIGS-VSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSE-LVSVYREKVVPVASMLTPNQFEAEQL 163 (308)
Q Consensus 87 ~~~v~-~G~l~~-~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~-~~~~l~~~ll~~~diitpN~~E~~~L 163 (308)
++++. .|+++. +...+.+.++++.++++ ++++++||+++. ..|..++ ..+.++ .+++++|+++||+.|++.|
T Consensus 139 ~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~--~~~~~~~~~~~~~~-~ll~~~dil~~N~~E~~~l 213 (332)
T 2qcv_A 139 SKLLLVSGTALSKSPSREAVLKAIRLAKRN--DVKVVFELDYRP--YSWETPEETAVYYS-LVAEQSDIVIGTREEFDVL 213 (332)
T ss_dssp EEEEEEEGGGGSSTTHHHHHHHHHHHHHHT--TCEEEEECCCCG--GGSSCHHHHHHHHH-HHHHHCSEEEEEHHHHHHH
T ss_pred CCEEEEeCccccCchhHHHHHHHHHHHHHC--CCEEEEcCcCch--hhcCCHHHHHHHHH-HHHHhCCEEEccHHHHHHH
Confidence 66554 677543 33457778888888876 789999998753 2443333 333344 4889999999999999999
Q ss_pred hCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC-CCCCCccHHHHHHHHHH
Q 021743 164 TGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGW 242 (308)
Q Consensus 164 ~g~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~GaGD~f~a~l~~~ 242 (308)
+|.... ++..+++++|+++|++.|+||.|+ +|++++.. + ++.++++.++++ +|++||||+|+|+|+++
T Consensus 214 ~g~~~~--~~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~-----~---~~~~~~~~~~v~vvdt~GAGDaf~a~~~~~ 282 (332)
T 2qcv_A 214 ENRTEK--GDNDETIRYLFKHSPELIVIKHGV-EGSFAYTK-----A---GEAYRGYAYKTKVLKTFGAGDSYASAFLYA 282 (332)
T ss_dssp TTCSSC--CCHHHHHHHHTTSSCSEEEEECGG-GCEEEEET-----T---SCEEEECCBCCCCSCCTTHHHHHHHHHHHH
T ss_pred hCCCcC--CCHHHHHHHHHHcCCCEEEEEECC-cceEEEec-----C---CceEEcCCCCccccCCCCcHHHHHHHHHHH
Confidence 997541 234567788888899999999995 89877642 0 245667666666 59999999999999999
Q ss_pred HccCCCCHHHHHHHHHHHHHHHHHH
Q 021743 243 SNKYRDNLDIAAELAVSSLQALLQR 267 (308)
Q Consensus 243 l~~~g~~~~~A~~~A~a~~~~~i~~ 267 (308)
|++ |.++++|+++|+++++.++.+
T Consensus 283 l~~-g~~~~~a~~~A~~~aa~~v~~ 306 (332)
T 2qcv_A 283 LIS-GKGIETALKYGSASASIVVSK 306 (332)
T ss_dssp HHT-TCCHHHHHHHHHHHHHHHHHC
T ss_pred HHc-CCCHHHHHHHHHHHHHHHHcc
Confidence 998 999999999999998888864
No 30
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=99.84 E-value=1.5e-20 Score=174.47 Aligned_cols=176 Identities=12% Similarity=0.103 Sum_probs=133.2
Q ss_pred eCCHHHHHH--HHHHHHhCCCcccCEEEE-eccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHH
Q 021743 66 VLNGQQLCD--LIEGLEANNLLYYTHLLT-GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVY 142 (308)
Q Consensus 66 ~~~~~~~~~--~l~~l~~~~~~~~~~v~~-G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l 142 (308)
.++.++++. ..+.+. .++++.+ |+... ...+.+.++++.++++ ++++++||. +..| .+...+.+
T Consensus 161 ~l~~~~~~~~~~~~~~~-----~~~~v~~~g~~~~-~~~~~~~~~~~~a~~~--g~~v~ld~~----~~~~-~~~~~~~l 227 (370)
T 3vas_A 161 DLSLAHIEQPHVWSLVE-----KAQVYYIAGFVIN-TCYEGMLKIAKHSLEN--EKLFCFNLS----APFL-SQFNTKEV 227 (370)
T ss_dssp GCCHHHHTSHHHHHHHH-----HCSEEEEEGGGHH-HHHHHHHHHHHHHHHT--TCEEEEECC----CHHH-HHHCHHHH
T ss_pred hCCHHHcCchhhHHHHh-----hCCEEEEEeeecc-CCHHHHHHHHHHHHHc--CCEEEEECC----cHHH-HHHHHHHH
Confidence 455555543 223344 3676655 66543 4567888999999887 789999983 1111 12333455
Q ss_pred HHhhcccceEEcCCHHHHHHhhCCCCCCHHHHHHHHHHHHHc-------CCCeEEEeeeecCCcEEEE--eeeccCCCCC
Q 021743 143 REKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAA-------GPAKVVITSINIDGNLFLI--GSHQKEKGQS 213 (308)
Q Consensus 143 ~~~ll~~~diitpN~~E~~~L~g~~~~~~~d~~~~~~~l~~~-------g~~~Vvit~g~~~g~~~~~--~~~~~~~~~~ 213 (308)
++ +++.+|+++||+.|++.|+|....+.++++++++.|.++ |++.|+||.|. +|++++. .
T Consensus 228 ~~-ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~VvvT~G~-~Ga~~~~~~~--------- 296 (370)
T 3vas_A 228 DE-MISYSNIVFGNESEAEAYGEVHGLLEDTVHATARYIADLPFADGKKRKRLVIITRGK-NPLLYTDSSD--------- 296 (370)
T ss_dssp HH-HHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETT-EEEEEEETTC---------
T ss_pred HH-HHhhCCEEEcCHHHHHHHhcccCCCccCHHHHHHHHHhhcccccccCCCEEEEecCC-CceEEEEcCC---------
Confidence 55 889999999999999999987655556888999999875 89999999995 8888775 3
Q ss_pred CcEEEEEeccc---C-CCCCCccHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHH
Q 021743 214 PEQFKIVIPKI---P-AYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 214 ~~~~~~~~~~~---~-~~t~GaGD~f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
++.++++.+++ + +||+||||+|+|+|+++|++ |.++++|+++|+++++.++.
T Consensus 297 ~~~~~~~~~~v~~~~vvDttGAGDaF~ag~l~~l~~-g~~l~~a~~~A~aaAa~~v~ 352 (370)
T 3vas_A 297 SEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIR-GKPMITSLHAAVKAAAYIIC 352 (370)
T ss_dssp SSCEEECCCCCCTTTCSCCTTHHHHHHHHHHHHHTT-TCCHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEecccccCCCcCCCCChHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHc
Confidence 45566777665 4 59999999999999999998 99999999999998888775
No 31
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=99.83 E-value=7.2e-20 Score=168.80 Aligned_cols=150 Identities=21% Similarity=0.186 Sum_probs=119.6
Q ss_pred ccCEEEE-eccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhh
Q 021743 86 YYTHLLT-GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (308)
Q Consensus 86 ~~~~v~~-G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~ 164 (308)
.++++.+ |+... ..+.+.++++.++++ ++++++||... .| .+++.+|+++||+.|++.|+
T Consensus 186 ~~~~v~~~g~~~~--~~~~~~~~~~~a~~~--g~~v~~D~~~~----~~-----------~~l~~~dil~pN~~Ea~~l~ 246 (352)
T 4e84_A 186 QHDVVLMSDYAKG--GLTHVTTMIEKARAA--GKAVLVDPKGD----DW-----------ARYRGASLITPNRAELREVV 246 (352)
T ss_dssp GCSEEEEECCSSS--SCSSHHHHHHHHHHT--TCEEEEECCSS----CC-----------STTTTCSEECCBHHHHHHHH
T ss_pred cCCEEEEeCCCCC--CHHHHHHHHHHHHhc--CCEEEEECCCc----ch-----------hhccCCcEEcCCHHHHHHHh
Confidence 3676665 44321 112256777888876 88999999542 22 37889999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHH-cCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC-CCCCCccHHHHHHHHHH
Q 021743 165 GFRIGSEADGREACKILHA-AGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGW 242 (308)
Q Consensus 165 g~~~~~~~d~~~~~~~l~~-~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~GaGD~f~a~l~~~ 242 (308)
| ...+.+++.+++++|.+ +|++.|+||.|. +|+++... ++.++++.++++ +||+||||+|+|+|+++
T Consensus 247 g-~~~~~~~~~~~a~~l~~~~g~~~VvvT~G~-~Ga~~~~~---------~~~~~~pa~~v~vvDttGAGDaF~ag~l~~ 315 (352)
T 4e84_A 247 G-QWKSEDDLRARVANLRAELDIDALLLTRSE-EGMTLFSA---------GGELHAPALAREVFDVSGAGDTVIATVATM 315 (352)
T ss_dssp C-CCSSHHHHHHHHHHHHHHHTCSEEEEECGG-GCEEEEET---------TEEEEECCCCSCCSCCTTHHHHHHHHHHHH
T ss_pred C-CCCCHHHHHHHHHHHHHHhCCCEEEEEcCC-CcEEEEEC---------CceEEecCCCcCccCCccccHHHHHHHHHH
Confidence 9 56677889999999985 799999999995 89887743 456677776666 59999999999999999
Q ss_pred HccCCCCHHHHHHHHHHHHHHHHH
Q 021743 243 SNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 243 l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
|++ |.++++|+++|+++++.++.
T Consensus 316 l~~-g~~l~~al~~A~aaaa~~v~ 338 (352)
T 4e84_A 316 LGA-GVPLVDAVVLANRAAGIVVG 338 (352)
T ss_dssp HHT-TCCHHHHHHHHHHHHHHHHT
T ss_pred HHc-CCCHHHHHHHHHHHHHHHhc
Confidence 998 99999999999998887775
No 32
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=99.83 E-value=3e-21 Score=176.83 Aligned_cols=162 Identities=9% Similarity=0.042 Sum_probs=119.3
Q ss_pred cCEEEEe--ccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCC-hhhHHHHHHhhcccceEEcCCHHHHHHh
Q 021743 87 YTHLLTG--YIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVP-SELVSVYREKVVPVASMLTPNQFEAEQL 163 (308)
Q Consensus 87 ~~~v~~G--~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~-~~~~~~l~~~ll~~~diitpN~~E~~~L 163 (308)
.+++.++ .+.++...+.+.++++.++++ ++++++||+++. .+|.+ +...+.+++ +++.+|+++||.+|++.|
T Consensus 130 ~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~--~~~~~~~~~~~~~~~-ll~~~dil~~N~~E~~~l 204 (338)
T 3ljs_A 130 ALIFHACSNSMTDADIAEVTFEGMRRAQAA--GAIVSFDLNFRP--MLWPNGENPASRLWK-GLSLADVVKLSSEELDYL 204 (338)
T ss_dssp EEEEEEEGGGGSSHHHHHHHHHHHHHHHHT--TCEEEEECCCCG--GGSCTTCCTHHHHHH-HHHTCSEEEEEHHHHHHH
T ss_pred CCEEEECChHhcCchHHHHHHHHHHHHHHc--CCEEEEECCCCh--hhcCCHHHHHHHHHH-HHhhCCEEEecHHHHHHH
Confidence 5666553 367777888999999999987 789999999874 35532 334555554 899999999999999999
Q ss_pred hCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC-CCCCCccHHHHHHHHHH
Q 021743 164 TGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGW 242 (308)
Q Consensus 164 ~g~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~GaGD~f~a~l~~~ 242 (308)
+|.+.... .++++.|+++|++.|+||.|. +|++++.. ++.++++.++++ +||+||||+|+|+|+++
T Consensus 205 ~g~~~~~~---~~~~~~l~~~g~~~vvvT~G~-~G~~~~~~---------~~~~~~~~~~v~vvDttGAGDaF~a~~~~~ 271 (338)
T 3ljs_A 205 ANTLAADA---NAVIQQLWQGRAQLLLVTDAA-GPVHWYTR---------TAGGEVPTFRVQVQDSNAAGDAFVGGMLYT 271 (338)
T ss_dssp HHHHTSCH---HHHHHHHTTTTCCEEEEEETT-EEEEEEES---------SCEEEECC-----------CHHHHHHHHHH
T ss_pred hCCCChhH---HHHHHHHHhcCCCEEEEeeCC-CceEEEEC---------CceEEeCCCCCccCCCCCccHHHHHHHHHH
Confidence 98643222 237888888999999999995 78877643 456677776666 59999999999999999
Q ss_pred HccCC--------------CCHHHHHHHHHHHHHHHHHH
Q 021743 243 SNKYR--------------DNLDIAAELAVSSLQALLQR 267 (308)
Q Consensus 243 l~~~g--------------~~~~~A~~~A~a~~~~~i~~ 267 (308)
|++ | .++++|+++|+++++.++..
T Consensus 272 l~~-g~~~~~~~~~~~~~~~~l~~al~~A~~~aa~~v~~ 309 (338)
T 3ljs_A 272 FAQ-QFDDAAALIDFCHDPESIVSTLRFAAAVGALAVTR 309 (338)
T ss_dssp HHH-HCSSTHHHHHHHTCHHHHHHHHHHHHHHHGGGC--
T ss_pred HHh-CCCcccchhccccChHHHHHHHHHHHHHHHHHhCC
Confidence 998 8 89999999999988777763
No 33
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.83 E-value=1.8e-20 Score=171.27 Aligned_cols=173 Identities=11% Similarity=0.085 Sum_probs=131.8
Q ss_pred eeCCHHHHHHHHHHHHhCCCcccCEEEE-eccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHH
Q 021743 65 QVLNGQQLCDLIEGLEANNLLYYTHLLT-GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYR 143 (308)
Q Consensus 65 ~~~~~~~~~~~l~~l~~~~~~~~~~v~~-G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~ 143 (308)
..+++++++.+++.+.+.- ..++++.+ |+++.+...+.+.++++.++++ ++++++||+.. .++
T Consensus 126 ~~l~~~~~~~~~~~~~~~~-~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~-------------~~~ 189 (331)
T 2ajr_A 126 PDVTDMDVNHFLRRYKMTL-SKVDCVVISGSIPPGVNEGICNELVRLARER--GVFVFVEQTPR-------------LLE 189 (331)
T ss_dssp CCCCHHHHHHHHHHHHHHH-TTCSEEEEESCCCTTSCTTHHHHHHHHHHHT--TCEEEEECCHH-------------HHH
T ss_pred CCCCHHHHHHHHHHHHHhc-ccCCEEEEECCCCCCCCHHHHHHHHHHHHHc--CCEEEEECChH-------------HHH
Confidence 3466667766654432210 03676655 7887544456777888888876 78999999521 123
Q ss_pred Hhhcc---cceEEcCCHHH-HHHhhCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEE
Q 021743 144 EKVVP---VASMLTPNQFE-AEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKI 219 (308)
Q Consensus 144 ~~ll~---~~diitpN~~E-~~~L~g~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~ 219 (308)
+ +++ .+|+++||++| ++.|+|.+..+.+++.+++++|.++ ++.|+||.|. +|++++.. ++.+++
T Consensus 190 ~-~l~~~~~~dil~~N~~E~~~~l~g~~~~~~~~~~~~~~~l~~~-~~~vvvT~G~-~Ga~~~~~---------~~~~~~ 257 (331)
T 2ajr_A 190 R-IYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVKLAEKLAEK-SQVSVVSYEV-KNDIVATR---------EGVWLI 257 (331)
T ss_dssp H-HHHSSCCCSEECCCCTTCCSCBTTBCCCSHHHHHHHHHHHHHH-SSEEEEEETT-TEEEEECS---------SCEEEE
T ss_pred H-HHhcCCCCeEEEeCccchHHHHhCCCCCCHHHHHHHHHHHHHh-cCEEEEeecC-CceEEEeC---------CcEEEE
Confidence 2 343 49999999999 9999998777778888999999888 9999999995 88877632 346667
Q ss_pred E-ecccC-CCCCCccHHHHHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHH
Q 021743 220 V-IPKIP-AYFTGTGDLMTALLLGWSN-KYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 220 ~-~~~~~-~~t~GaGD~f~a~l~~~l~-~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
+ .++++ +|++||||+|+|+|+++|+ + |.++++|+++|+++++.++.
T Consensus 258 ~~~~~v~vvDttGAGDaF~ag~l~~l~~~-g~~~~~al~~A~a~aa~~v~ 306 (331)
T 2ajr_A 258 RSKEEIDTSHLLGAGDAYVAGMVYYFIKH-GANFLEMAKFGFASALAATR 306 (331)
T ss_dssp EESSCCCGGGCTTHHHHHHHHHHHHHHHH-CSCHHHHHHHHHHHHHHHTT
T ss_pred ecCCcccccCCCchHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHc
Confidence 7 66665 5999999999999999999 9 99999999999998887775
No 34
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=99.82 E-value=1.4e-19 Score=164.30 Aligned_cols=158 Identities=13% Similarity=-0.004 Sum_probs=120.9
Q ss_pred cCEEE-EeccC-CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCCh-hhHHHHHHhhcccceEEcCCHHHHHHh
Q 021743 87 YTHLL-TGYIG-SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPS-ELVSVYREKVVPVASMLTPNQFEAEQL 163 (308)
Q Consensus 87 ~~~v~-~G~l~-~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~-~~~~~l~~~ll~~~diitpN~~E~~~L 163 (308)
++++. .|+.. .....+.+..+++..++ +.++++||+++. ..|.++ ...+.+++ +++++|+++||+.|++.|
T Consensus 136 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~v~~D~~~~~--~~~~~~~~~~~~~~~-~l~~~dil~~N~~E~~~l 209 (319)
T 3pl2_A 136 ADILWFTLTGFSEEPSRGTHREILTTRAN---RRHTIFDLDYRP--MFWESPEEATKQAEW-ALQHSTVAVGNKEECEIA 209 (319)
T ss_dssp CSEEEEEGGGGSSTTHHHHHHHHHHHHTT---CSCEEEECCCCG--GGSSCHHHHHHHHHH-HHTTCSEEEECHHHHHHH
T ss_pred CCEEEEecccccCchhHHHHHHHHHHHHH---CCcEEEeCCCCh--hhcCCHHHHHHHHHH-HHHhCCEEEcCHHHHHHH
Confidence 56554 46543 33334555666666554 457899998764 355443 33455554 899999999999999999
Q ss_pred hCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC-CCCCCccHHHHHHHHHH
Q 021743 164 TGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGW 242 (308)
Q Consensus 164 ~g~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~GaGD~f~a~l~~~ 242 (308)
+|.+ +..++++.|+++|++.|+||.|. +|+++... ++.++++.++++ +|++||||+|+|+|+++
T Consensus 210 ~g~~-----~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~---------~~~~~~~~~~v~vvdttGAGDaf~a~~~~~ 274 (319)
T 3pl2_A 210 VGET-----EPERAGRALLERGVELAIVKQGP-KGVMAMTK---------DETVEVPPFFVDVINGLGAGDAFGGALCHG 274 (319)
T ss_dssp HSCC-----SHHHHHHHHHHTTCSEEEEEEET-TEEEEECS---------SCEEEECCCCCCCSCCTTHHHHHHHHHHHH
T ss_pred cCCC-----CHHHHHHHHHhcCCCEEEEEECC-CCeEEEEC---------CceEEeCCcccCCCCCcCchHHHHHHHHHH
Confidence 9973 45677888889999999999995 88877643 456677776666 59999999999999999
Q ss_pred HccCCCCHHHHHHHHHHHHHHHHH
Q 021743 243 SNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 243 l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
|++ |.++++|+++|+++++.++.
T Consensus 275 l~~-g~~~~~a~~~A~~~aa~~v~ 297 (319)
T 3pl2_A 275 LLS-EWPLEKVLRFANTAGALVAS 297 (319)
T ss_dssp HHT-TCCHHHHHHHHHHHHHHHHT
T ss_pred HHc-CCCHHHHHHHHHHHHHHHHh
Confidence 998 99999999999998887775
No 35
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=99.82 E-value=1.6e-20 Score=172.20 Aligned_cols=160 Identities=19% Similarity=0.185 Sum_probs=127.1
Q ss_pred ccCEEEE-ec-cCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCC-hhhHHHHHHhhcccceEEcCCHHHHHH
Q 021743 86 YYTHLLT-GY-IGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVP-SELVSVYREKVVPVASMLTPNQFEAEQ 162 (308)
Q Consensus 86 ~~~~v~~-G~-l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~-~~~~~~l~~~ll~~~diitpN~~E~~~ 162 (308)
.++++.+ |+ ++++...+.+.++++.++++ ++++++||++++ .+|.+ ++..+.+++ +++.+|+++||++|++.
T Consensus 141 ~~~~v~~~~~~l~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~--~~~~~~~~~~~~~~~-ll~~~dil~~N~~Ea~~ 215 (339)
T 1tyy_A 141 QYEWFYFSSIGLTDRPAREACLEGARRMREA--GGYVLFDVNLRS--KMWGNTDEIPELIAR-SAALASICKVSADELCQ 215 (339)
T ss_dssp TTCEEEEEHHHHSSHHHHHHHHHHHHHHHHT--TCEEEEECCCCG--GGCSCGGGHHHHHHH-HHHHCSEEEEEHHHHHH
T ss_pred cCCEEEEcchhhcCcccHHHHHHHHHHHHHc--CCEEEEeCCCCc--cccCCHHHHHHHHHH-HHhhCCEEecCHHHHHH
Confidence 3677666 44 55667778888999999886 789999999874 24533 344555654 88999999999999999
Q ss_pred hhCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC-CCCCCccHHHHHHHHH
Q 021743 163 LTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLG 241 (308)
Q Consensus 163 L~g~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~GaGD~f~a~l~~ 241 (308)
|+|.+ ++.+++++|.++|++.|+||.|. +|++++.. ++.++++.++++ +||+||||+|+|+|++
T Consensus 216 l~g~~-----~~~~~~~~l~~~g~~~VvvT~G~-~G~~~~~~---------~~~~~~~~~~v~vvDttGAGDaF~ag~~~ 280 (339)
T 1tyy_A 216 LSGAS-----HWQDARYYLRDLGCDTTIISLGA-DGALLITA---------EGEFHFPAPRVDVVDTTGAGDAFVGGLLF 280 (339)
T ss_dssp HHCCS-----SGGGGSSTTGGGTCSCEEEECGG-GCEEEESS---------SCEEEECCCCCCCSCCTTHHHHHHHHHHH
T ss_pred HhCCC-----CHHHHHHHHHHcCCCEEEEEECC-CceEEEeC---------CceEEcCCCCCCcCCCCCchHHHHHHHHH
Confidence 99974 34566777778899999999995 88877632 455667666666 5999999999999999
Q ss_pred HHccCC-----CCHHHHHHHHHHHHHHHHH
Q 021743 242 WSNKYR-----DNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 242 ~l~~~g-----~~~~~A~~~A~a~~~~~i~ 266 (308)
+|++ | .++++|+++|+++++.++.
T Consensus 281 ~l~~-g~~~~~~~l~~a~~~A~a~aa~~v~ 309 (339)
T 1tyy_A 281 TLSR-ANCWDHALLAEAISNANACGAMAVT 309 (339)
T ss_dssp HHTT-SSSCCHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHh-ccccccccHHHHHHHHHHHHHHHhC
Confidence 9998 7 8999999999998887775
No 36
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=99.82 E-value=3.6e-20 Score=170.28 Aligned_cols=161 Identities=16% Similarity=0.214 Sum_probs=121.9
Q ss_pred cCEEE-EeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhhC
Q 021743 87 YTHLL-TGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (308)
Q Consensus 87 ~~~v~-~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g 165 (308)
.++++ .|+... ...+.+.++++.++++ ++++++||. . .+..+...+.+++ +++++|+++||+.|++.|+|
T Consensus 163 ~~~~~~~g~~~~-~~~~~~~~~~~~a~~~--g~~v~~d~~----~-~~~~~~~~~~l~~-~l~~~dil~~N~~Ea~~l~~ 233 (347)
T 3otx_A 163 SRIFYFSGFTLT-VDVNHVLQACRKAREV--DGLFMINLS----A-PFIMQFFSAQLGE-VLPYTDIIVANRHEAKEFAN 233 (347)
T ss_dssp CSEEEEEGGGGG-TCHHHHHHHHHHHHHT--TCEEEEECC----C-HHHHHHCHHHHHH-HGGGCSEEEEEHHHHHHHHH
T ss_pred CCEEEEeeeecc-cCHHHHHHHHHHHHHh--CCEEEeeCc----h-hhhHHHHHHHHHH-HHhhCCEEecCHHHHHHHhc
Confidence 66555 466543 3356788899999887 789999983 1 1111223345565 88999999999999999987
Q ss_pred CCCCCHHHHHHHHHHHH------HcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEeccc---C-CCCCCccHHH
Q 021743 166 FRIGSEADGREACKILH------AAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKI---P-AYFTGTGDLM 235 (308)
Q Consensus 166 ~~~~~~~d~~~~~~~l~------~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~t~GaGD~f 235 (308)
....+.+++.++++.|. +.|++.|+||.|. +|+++... ++.++++.+++ + +||+||||+|
T Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~-~Ga~~~~~---------~~~~~~~~~~~~~~~vvDttGAGDaF 303 (347)
T 3otx_A 234 MMKWDTDCVEEIARRAVSEVPYTGTKGRVVVFTRDI-ESTVLATK---------DGVETVPVPQLDQDKVIDMNGAGDAF 303 (347)
T ss_dssp HHTCCCCCHHHHHHHHHHTSCCCCSSCCEEEEEETT-EEEEEEET---------TEEEEECCCCCCGGGCCSSCCSHHHH
T ss_pred ccCCCcCCHHHHHHHHHhhhccccCCCCEEEEEeCC-CCeEEEEC---------CeEEEEEecccCCCCCCCCCChHHHH
Confidence 53323345677778887 4789999999995 88887643 45566666655 4 5999999999
Q ss_pred HHHHHHHHccCCCCHHHHHHHHHHHHHHHHHH
Q 021743 236 TALLLGWSNKYRDNLDIAAELAVSSLQALLQR 267 (308)
Q Consensus 236 ~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~~ 267 (308)
+|+|+++|++ |+++++|+++|+++++.++++
T Consensus 304 ~ag~l~~l~~-g~~l~~a~~~a~~~aa~~v~~ 334 (347)
T 3otx_A 304 MGGFLSAYAV-GKDLRRCCETGHYTAQEVIQR 334 (347)
T ss_dssp HHHHHHHHTT-TCCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHHHHHHcc
Confidence 9999999998 999999999999988888763
No 37
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=99.82 E-value=1.4e-19 Score=163.64 Aligned_cols=155 Identities=19% Similarity=0.087 Sum_probs=120.7
Q ss_pred ccCEEEE-eccC--CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHH
Q 021743 86 YYTHLLT-GYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQ 162 (308)
Q Consensus 86 ~~~~v~~-G~l~--~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~ 162 (308)
.++++.+ |+.+ ++...+.+.++++.++++ ++++++||++++ .+|..++..+.+++ +++++|+++||..|++.
T Consensus 125 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~--~~~~~~~~~~~~~~-~l~~~dil~~N~~E~~~ 199 (309)
T 1v1a_A 125 GVRFLHLSGITPALSPEARAFSLWAMEEAKRR--GVRVSLDVNYRQ--TLWSPEEARGFLER-ALPGVDLLFLSEEEAEL 199 (309)
T ss_dssp TCSEEEEETTGGGSCHHHHHHHHHHHHHHHTT--TCEEEEECCCCT--TTSCHHHHHHHHHH-HGGGCSEEEEEHHHHHH
T ss_pred CCCEEEEeCchhccCchHHHHHHHHHHHHHHc--CCEEEEeCCCCc--ccCCHHHHHHHHHH-HHHhCCEEECcHHHHHH
Confidence 3676654 6654 466678888899998876 789999998874 24532344455654 89999999999999999
Q ss_pred hhCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC-CCCCCccHHHHHHHHH
Q 021743 163 LTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLG 241 (308)
Q Consensus 163 L~g~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~GaGD~f~a~l~~ 241 (308)
|+|.+ +++++ ++|++.|+||+|. +|+++ .. . ++.++++.++++ +|++||||+|+|+|++
T Consensus 200 l~g~~-------~~~~~---~~g~~~vvvt~G~-~G~~~-~~-----~---~~~~~~~~~~v~vvdttGAGDaf~a~~~~ 259 (309)
T 1v1a_A 200 LFGRV-------EEALR---ALSAPEVVLKRGA-KGAWA-FV-----D---GRRVEGSAFAVEAVDPVGAGDAFAAGYLA 259 (309)
T ss_dssp HHSSH-------HHHHH---HTCCSEEEEECGG-GCEEE-EE-----T---TEEEECCCCCCCCSCCTTHHHHHHHHHHH
T ss_pred HhCCH-------HHHHH---hcCCCEEEEEecC-CCeeE-ec-----C---CcEEEeCCCCCCcCCCCCchHHHHHHHHH
Confidence 99863 33343 6799999999995 88876 43 0 345566666666 5999999999999999
Q ss_pred HHccCCCCHHHHHHHHHHHHHHHHH
Q 021743 242 WSNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 242 ~l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
+|++ |.++++|+++|+++++.++.
T Consensus 260 ~l~~-g~~~~~a~~~a~~~aa~~v~ 283 (309)
T 1v1a_A 260 GAVW-GLPVEERLRLANLLGASVAA 283 (309)
T ss_dssp HHHT-TCCHHHHHHHHHHHHHHHHT
T ss_pred HHHc-CCCHHHHHHHHHHHHHHHHc
Confidence 9998 99999999999998888775
No 38
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=99.82 E-value=4.9e-20 Score=170.70 Aligned_cols=162 Identities=18% Similarity=0.201 Sum_probs=123.1
Q ss_pred cCEEEE-eccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhhC
Q 021743 87 YTHLLT-GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (308)
Q Consensus 87 ~~~v~~-G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g 165 (308)
.+++++ |++.. ...+.+.++++.++++ ++++++||. +..+ .+...+.+++ +++++|+++||+.|++.|+|
T Consensus 177 ~~~v~i~G~~~~-~~~~~~~~~~~~a~~~--g~~v~~d~~----~~~~-~~~~~~~l~~-~l~~~dil~~N~~Ea~~l~g 247 (365)
T 3loo_A 177 AQFFYVSGFFFT-VSFESALSVAKEAAAT--GRMFMMNLS----APFV-PQFYKNNLEE-IFPYVDVLFGNETEAIALAK 247 (365)
T ss_dssp CSEEEEEGGGHH-HHHHHHHHHHHHHHHT--TCEEEEECC----STHH-HHHCHHHHHH-HGGGCSEEEEEHHHHHHHHH
T ss_pred CCEEEEeeeecc-CCHHHHHHHHHHHHHc--CCEEEEECC----chhh-hHHHHHHHHH-HHHhCCEEecCHHHHHHHhc
Confidence 676555 77553 3456788899999887 788999982 2111 1233445565 88999999999999999998
Q ss_pred CCCCCHHHHHHHHHHHHHc------CCCeEEEeeeecCCcEEE--EeeeccCCCCCCcEEEEEeccc---C-CCCCCccH
Q 021743 166 FRIGSEADGREACKILHAA------GPAKVVITSINIDGNLFL--IGSHQKEKGQSPEQFKIVIPKI---P-AYFTGTGD 233 (308)
Q Consensus 166 ~~~~~~~d~~~~~~~l~~~------g~~~Vvit~g~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~---~-~~t~GaGD 233 (308)
....+.+++.++++.|.++ |++.|+||.|. +|+++. .. ++.++++.+++ + +||+||||
T Consensus 248 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~-~Ga~~~~~~~---------~~~~~~~~~~v~~~~vvDttGAGD 317 (365)
T 3loo_A 248 EFNYGTEDLREIGKRIAALPKENGKRKRIVIITQGS-DPVLLIEAGT---------DNVREFPVQKLAPEQMVDTNGAGD 317 (365)
T ss_dssp HTTCCCCCHHHHHHHHHTSCCSSTTSCCEEEEEETT-EEEEEEETTC---------SCCEEECCCCCC------CTTHHH
T ss_pred ccCCCCCCHHHHHHHHHhhhhhccCCCCEEEEEeCC-CCEEEEEecC---------CeEEEEeccccCCCCccCCCChHH
Confidence 6543445677888888874 88999999995 888776 32 34566776665 4 59999999
Q ss_pred HHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH
Q 021743 234 LMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRT 268 (308)
Q Consensus 234 ~f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~~t 268 (308)
+|+|+|+++|++ |+++++|+++|+++++.++++.
T Consensus 318 aF~agfl~~l~~-g~~l~~a~~~a~~~Aa~~v~~~ 351 (365)
T 3loo_A 318 AFVGGFLAQLLQ-SRTVDVCIKCGIWAAREIIQRS 351 (365)
T ss_dssp HHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHcCC
Confidence 999999999998 9999999999999998888754
No 39
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=99.82 E-value=1.5e-19 Score=163.24 Aligned_cols=215 Identities=18% Similarity=0.211 Sum_probs=142.2
Q ss_pred CCCCCCCeEEEEeccCccCccchhhcHHHHHhcCCcceeeceEEeccCCC-----CCCceeeeCC-HHHHHHHHHHHHhC
Q 021743 9 ALPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTG-----YPTFKGQVLN-GQQLCDLIEGLEAN 82 (308)
Q Consensus 9 ~~~~~~~~Vl~i~~~~~~G~~G~~a~~~~l~~~Gi~~~~v~t~~~~~~tg-----~~~~~g~~~~-~~~~~~~l~~l~~~ 82 (308)
+-+.++|+||+|.|++.+||+|..++..+++. |.....+-|. ++..+ .......+++ .++++.+++
T Consensus 39 ~hKg~~G~vlvIaGsd~~~GA~ilA~~aal~~-Gaglvt~~t~--~~~~~~v~~~~pe~~~~~~~~~~ql~~~~~----- 110 (310)
T 2r3b_A 39 SYKSNFGRVVLIGGNRQYGGAIIMSTEACINS-GAGLTTVITD--VKNHGPLHARCPEAMVVGFEETVLLTNVVE----- 110 (310)
T ss_dssp CCGGGGCEEEEECCCSSSHHHHHHHHHHHHHH-TCSEEEEECC--GGGHHHHHHHCTTCEEECTTCHHHHHHHHH-----
T ss_pred CCCCcCCEEEEEECCCCCCcHHHHHHHHHHHh-CcCcEEEEEC--hhhHhHHhhCChhheEecCCcHHHHHHHhc-----
Confidence 44567889999999999999999999888876 6554443332 22111 0111111221 134433332
Q ss_pred CCcccCEEEEec-cC-CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHH--hhc--ccceEEcCC
Q 021743 83 NLLYYTHLLTGY-IG-SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYRE--KVV--PVASMLTPN 156 (308)
Q Consensus 83 ~~~~~~~v~~G~-l~-~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~--~ll--~~~diitpN 156 (308)
.++++++|+ ++ +.+..+.+.++++.++ .+.++|+||. |.. .+.. .++ +.+++||||
T Consensus 111 ---~~dav~IG~Gl~~~~~~~~~v~~~l~~~~---~~~pvVlDa~----g~~--------ll~~~~~~l~~~~~~viTPN 172 (310)
T 2r3b_A 111 ---QADVILIGPGLGLDATAQQILKMVLAQHQ---KQQWLIIDGS----AIT--------LFSQGNFSLTYPEKVVFTPH 172 (310)
T ss_dssp ---HCSEEEECTTCCSSHHHHHHHHHHHHHCC---TTCEEEEETH----HHH--------HHHHTTCCCSSGGGEEEECC
T ss_pred ---cCCEEEEeCCCCCCHHHHHHHHHHHHhcC---CCCcEEEcCC----cch--------hcccchhhhcCCCCEEEcCC
Confidence 278999998 66 6666777777777554 2679999993 211 1111 123 478999999
Q ss_pred HHHHHHhhCCCCCCH-HHH-HHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC-CCCCCccH
Q 021743 157 QFEAEQLTGFRIGSE-ADG-REACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGD 233 (308)
Q Consensus 157 ~~E~~~L~g~~~~~~-~d~-~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~GaGD 233 (308)
..|++.|+|.++.+. ++. .++++++ |+ .|++|++ +.++... +..+ +..+..+ .+++|+||
T Consensus 173 ~~E~~~L~g~~~~~~~~~~a~~aA~~l---g~-~VvlKG~---~~vi~~~---------~~~~-~~~~g~~~~~t~GtGD 235 (310)
T 2r3b_A 173 QMEWQRLSHLPIEQQTLANNQRQQAKL---GS-TIVLKSH---RTTIFHA---------GEPF-QNTGGNPGMATGGTGD 235 (310)
T ss_dssp HHHHHHHHCCCGGGCCHHHHHHHHHHH---TS-EEEECST---TCEEECS---------SSCE-ECCCCCGGGCSTTHHH
T ss_pred HHHHHHHhCCCCCcccchHHHHHHHHh---Cc-EEEEeCC---ceEEEEC---------CEEE-EECCCCCCCCCCChHH
Confidence 999999999876543 355 6777777 54 6777764 3565531 2333 3344555 37999999
Q ss_pred HHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH
Q 021743 234 LMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRT 268 (308)
Q Consensus 234 ~f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~~t 268 (308)
+|+|.+++++++ |.++.+|++.| .+++..+...
T Consensus 236 ~Lag~Iaa~lA~-g~~~~eA~~~A-~~~~~~ag~~ 268 (310)
T 2r3b_A 236 TLAGIIAGFLAQ-FKPTIETIAGA-VYLHSLIGDD 268 (310)
T ss_dssp HHHHHHHHHHHH-SCSSHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCHHHHHHHH-HHHHHHHHHH
Confidence 999999999999 99999999999 5555555443
No 40
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=99.81 E-value=7.1e-21 Score=173.67 Aligned_cols=160 Identities=16% Similarity=0.142 Sum_probs=120.6
Q ss_pred cCEEEE-ec-cCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCC-ChhhHHHHHHhhcccceEEcCCHHHHHHh
Q 021743 87 YTHLLT-GY-IGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYV-PSELVSVYREKVVPVASMLTPNQFEAEQL 163 (308)
Q Consensus 87 ~~~v~~-G~-l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~-~~~~~~~l~~~ll~~~diitpN~~E~~~L 163 (308)
.+++.+ |+ +..+...+.+.++++.++++ ++++++||++++ .+|. .++..+.+++ +++++|+++||+.|++.|
T Consensus 145 ~~~v~~~g~~l~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~--~~~~~~~~~~~~~~~-~l~~~dil~~N~~E~~~l 219 (327)
T 3hj6_A 145 SKVFHLSTFILSRKPARDTAIKAFNYAREQ--GKIVCFDPCYRK--VLWPEGDDGAGVVEE-IISRADFVKPSLDDARHL 219 (327)
T ss_dssp -CEEEEESHHHHSHHHHHHHHHHHHHHHHT--TCEEEEECCCCG--GGSCSSSCSHHHHHH-HHTTCSEECCBHHHHHHH
T ss_pred CCEEEECchHhcCchhHHHHHHHHHHHHHC--CCEEEEECCCch--hhcCCHHHHHHHHHH-HHhhCCEEecCHHHHHHH
Confidence 666655 43 44555678888999999887 889999998764 2443 2344555654 899999999999999999
Q ss_pred hCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC-CCCCCccHHHHHHHHHH
Q 021743 164 TGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGW 242 (308)
Q Consensus 164 ~g~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~GaGD~f~a~l~~~ 242 (308)
+|.. +..++++.|.++|++.|+||.|. +|+++... ++.++++.++++ +||+||||+|+|+|+++
T Consensus 220 ~g~~-----~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~---------~~~~~~~~~~v~vvdttGAGDaf~ag~~~~ 284 (327)
T 3hj6_A 220 FGPD-----SPENYVKRYLELGVKAVILTLGE-EGVIASDG---------EEIIRIPAFSEDAVDVTGAGDAFWSGFICG 284 (327)
T ss_dssp HTTS-----CSSGGGGGGTTTTCSEEEEECST-TCEEEECS---------SCEEESCSSTTC-----CCHHHHHHHHHHT
T ss_pred hCCC-----CHHHHHHHHHhCCCCEEEEEECC-CceEEEeC---------CeeEEcCCcccccCCCcChhHHHHHHHHHH
Confidence 9973 23456677888899999999995 89877643 456666666666 59999999999999999
Q ss_pred HccCCCCHHHHHHHHHHHHHHHHHH
Q 021743 243 SNKYRDNLDIAAELAVSSLQALLQR 267 (308)
Q Consensus 243 l~~~g~~~~~A~~~A~a~~~~~i~~ 267 (308)
|++ |.++++|+++|+++++.++.+
T Consensus 285 l~~-g~~~~~a~~~A~a~aa~~v~~ 308 (327)
T 3hj6_A 285 LLD-GYTVKRSIKLGNGVAAFKIRG 308 (327)
T ss_dssp TSS-CSTTHHHHHHHHCCCSSCC--
T ss_pred HHc-CCCHHHHHHHHHHHHHHHhcC
Confidence 998 999999999999987776654
No 41
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=99.81 E-value=3.7e-20 Score=170.01 Aligned_cols=160 Identities=15% Similarity=0.117 Sum_probs=122.6
Q ss_pred cCEEEE-eccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhhC
Q 021743 87 YTHLLT-GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (308)
Q Consensus 87 ~~~v~~-G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g 165 (308)
++++.+ |+.+. ...+.+.++++.++++ ++++++||. +..| .++..+.+++ +++++|+++||+.|++.|+|
T Consensus 162 ~~~v~~~g~~~~-~~~~~~~~~~~~a~~~--g~~v~~d~~----~~~~-~~~~~~~~~~-~l~~~dil~~N~~E~~~l~g 232 (345)
T 1bx4_A 162 ARVCYIAGFFLT-VSPESVLKVAHHASEN--NRIFTLNLS----APFI-SQFYKESLMK-VMPYVDILFGNETEAATFAR 232 (345)
T ss_dssp CSEEEEEGGGGG-TCHHHHHHHHHHHHHT--TCEEEEECC----SHHH-HHHTHHHHHH-HGGGCSEEEEEHHHHHHHHH
T ss_pred CCEEEEEEEecc-CCHHHHHHHHHHHHHc--CCEEEEeCC----cHHH-HHHHHHHHHH-HhccCCEEeCCHHHHHHHhc
Confidence 676655 66542 3456778888888876 788999984 2222 2233445554 89999999999999999988
Q ss_pred CCCCCHHHHHHHHHHHHH------cCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEeccc---C-CCCCCccHHH
Q 021743 166 FRIGSEADGREACKILHA------AGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKI---P-AYFTGTGDLM 235 (308)
Q Consensus 166 ~~~~~~~d~~~~~~~l~~------~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~t~GaGD~f 235 (308)
....+.+++.+++++|.+ +|++.|+||+|. +|++++.. ++.++++.+++ + +||+||||+|
T Consensus 233 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~-~G~~~~~~---------~~~~~~~~~~v~~~~vvDttGAGDaf 302 (345)
T 1bx4_A 233 EQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGR-DDTIMATE---------SEVTAFAVLDQDQKEIIDTNGAGDAF 302 (345)
T ss_dssp HTTCCCCCHHHHHHHHHTSCCSCTTSCCEEEEEETT-EEEEEECS---------SCEEEECCCCCCCTTCCCHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHhcccccccCCCEEEEEeCC-CCeEEEEC---------CeEEEEeccccCcCccccCCCcchHH
Confidence 643333467788888887 599999999995 78876532 45666766665 4 5999999999
Q ss_pred HHHHHHHHccCCCCHHHHHHHHHHHHHHHHH
Q 021743 236 TALLLGWSNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 236 ~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
+|+|+++|++ |.++++|+++|+++++.++.
T Consensus 303 ~ag~~~~l~~-g~~~~~a~~~A~~~aa~~v~ 332 (345)
T 1bx4_A 303 VGGFLSQLVS-DKPLTECIRAGHYAASIIIR 332 (345)
T ss_dssp HHHHHHHHTT-TCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHHHHHHh
Confidence 9999999998 99999999999998887774
No 42
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=99.81 E-value=1.7e-19 Score=162.93 Aligned_cols=220 Identities=17% Similarity=0.139 Sum_probs=145.0
Q ss_pred ccCCCCCCCeEEEEeccCccCccchhhcHHHHHhcCCcceeeceEEeccCCC-----CCCceeeeCC-HHHHHHHHHHHH
Q 021743 7 SLALPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTG-----YPTFKGQVLN-GQQLCDLIEGLE 80 (308)
Q Consensus 7 ~~~~~~~~~~Vl~i~~~~~~G~~G~~a~~~~l~~~Gi~~~~v~t~~~~~~tg-----~~~~~g~~~~-~~~~~~~l~~l~ 80 (308)
.-+-+.++|+||+|.|++.+|++|..++..+++. |.....+-|. ++..+ ........++ .++++.+++
T Consensus 51 ~~~hKg~~G~vlvIaGsd~~~GAgilA~~aal~~-Gaglvt~~t~--q~~~~~v~~~~pe~~~~~~~~~~ql~~~~~--- 124 (311)
T 3bgk_A 51 LNSHKGTFGRVLLIGGNYPYGGAIIMAALACVNS-GAGLVTVATH--KDNITALHSHLPEAMAFDMVEKDRLSEQIT--- 124 (311)
T ss_dssp SSCCSSTTCEEEEECCCTTCHHHHHHHHHHHHHT-TCSEEEEEEC--GGGHHHHHHHCTTSEEEETTCHHHHHHHHH---
T ss_pred CCCCCccCCEEEEEECCCCCCCHHHHHHHHHHHh-CcCeEEEEEC--hhhHhHHhhCChhHheeccccHHHHHHHhc---
Confidence 3456678899999999999999999999888876 6555443332 22211 0111112222 134333332
Q ss_pred hCCCcccCEEEEec-cC-CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHH--hh-c-ccceEEc
Q 021743 81 ANNLLYYTHLLTGY-IG-SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYRE--KV-V-PVASMLT 154 (308)
Q Consensus 81 ~~~~~~~~~v~~G~-l~-~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~--~l-l-~~~diit 154 (308)
.++++++|+ ++ +++..+.+.++++.++ . +.++|+||. |.. .+.. .+ + +.+++||
T Consensus 125 -----~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~--~~pvVlDa~----g~~--------ll~~~~~l~L~~~~~viT 184 (311)
T 3bgk_A 125 -----AADVVLMGPGLAEDDLAQTTFDVVWQAIE-P--KQTLIIDGS----AIN--------LLAKRKPAIWPTKQIILT 184 (311)
T ss_dssp -----HCSEEEECTTCCSSHHHHHHHHHHHHHCC-T--TSEEEEETH----HHH--------HHHHCC-CCCSCSCEEEE
T ss_pred -----cCCEEEEcCCCCCCHHHHHHHHHHHHHcC-C--CCeEEEeCC----hhh--------hhccChhhcCCCCCEEEC
Confidence 278999998 66 6777777787777654 2 679999993 211 1111 12 3 5789999
Q ss_pred CCHHHHHHhhCCCCCCH-HHH-HHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC-CCCCCc
Q 021743 155 PNQFEAEQLTGFRIGSE-ADG-REACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGT 231 (308)
Q Consensus 155 pN~~E~~~L~g~~~~~~-~d~-~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~Ga 231 (308)
||..|++.|+|.++.+. ++. .+++++|.+ | ..|++|++ +.++... +.. ++..+..+ .+++|+
T Consensus 185 PN~~E~~~L~g~~~~~~~~d~~~~aa~~l~~-g-~~VvlkG~---~~~i~~~---------~~~-~~~~~~~~~~~t~Gt 249 (311)
T 3bgk_A 185 PHQKEWERLSGLTIPEQIEAATQTALAHFPK-E-TILVAKSH---QTKIYQG---------QKI-GHIQVGGPYQATGGM 249 (311)
T ss_dssp CCSCC-CTTTCCCSTTCCHHHHHHHHTTSCT-T-CEEEECSS---SCEEEET---------TEE-EEECCCCGGGCSTTH
T ss_pred CcHHHHHHHhCCCCCcchhhHHHHHHHHHhc-C-CEEEEeCC---CeEEEEC---------CEE-EEECCCCCCCCCCcH
Confidence 99999999999877654 566 788888877 5 46777764 3566531 333 34455555 489999
Q ss_pred cHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH
Q 021743 232 GDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRT 268 (308)
Q Consensus 232 GD~f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~~t 268 (308)
||+|+|.+++++++.|.++.+|++.| .+++..+...
T Consensus 250 GD~Lag~iaa~lA~~g~~~~eA~~~A-~~~~~~ag~~ 285 (311)
T 3bgk_A 250 GDTLAGMIAGFVAQFHTDRFEVAAAA-VFLHSYIADQ 285 (311)
T ss_dssp HHHHHHHHHHHHHHCCSCHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCCHHHHHHHH-HHHHHHHHHH
Confidence 99998888888874168999999999 5555555443
No 43
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.80 E-value=7.2e-20 Score=165.90 Aligned_cols=149 Identities=19% Similarity=0.160 Sum_probs=113.1
Q ss_pred cCEEEEeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhhCC
Q 021743 87 YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGF 166 (308)
Q Consensus 87 ~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~ 166 (308)
.+++.++.... .+.+.++ +++. ++++++||++.. .+ +. .+++++|+++||.+|++.|+|.
T Consensus 141 ~~~v~~~~~~~---~~~~~~~---a~~~--~~~v~~Dp~~~~---~~--------~~-~ll~~~dil~~N~~E~~~l~g~ 200 (311)
T 1vm7_A 141 SDILLLQNEIP---FETTLEC---AKRF--NGIVIFDPAPAQ---GI--------NE-EIFQYLDYLTPNEKEIEALSKD 200 (311)
T ss_dssp CSEEEECSSSC---HHHHHHH---HHHC--CSEEEECCCSCT---TC--------CG-GGGGGCSEECCBHHHHHHHHHH
T ss_pred CCEEEEeCCCC---HHHHHHH---HHHc--CCEEEEeCcchh---hh--------hH-HHHhhCCEEeCCHHHHHHHhCC
Confidence 67776643222 2333333 5554 789999998642 11 12 4889999999999999999986
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC-CCCCCccHHHHHHHHHHHcc
Q 021743 167 RIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGWSNK 245 (308)
Q Consensus 167 ~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~GaGD~f~a~l~~~l~~ 245 (308)
+..+.+++.++++.|.++|++.|++|+|. +|.+++.. ++.++++.++++ +|++||||+|+|+|+++|++
T Consensus 201 ~~~~~~~~~~~~~~l~~~g~~~vvvT~G~-~G~~~~~~---------~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~ 270 (311)
T 1vm7_A 201 FFGEFLTVEKAAEKFLELGVKNVIVKLGD-KGVLLVNK---------NEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSE 270 (311)
T ss_dssp HHSCCCCHHHHHHHHHHTTCSEEEEECGG-GCEEEEET---------TEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHT
T ss_pred CCCChhHHHHHHHHHHHcCCCEEEEEECC-CCeEEEeC---------CceEEecCCCcccCCCCccHHHHHHHHHHHHHC
Confidence 43333467788888999999999999995 78876642 345566666665 59999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 021743 246 YRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 246 ~g~~~~~A~~~A~a~~~~~i~ 266 (308)
|.++++|+++|+++++.+++
T Consensus 271 -g~~~~~a~~~A~~~aa~~v~ 290 (311)
T 1vm7_A 271 -GKNPEEAVIFGTAAAAISVT 290 (311)
T ss_dssp -TCCHHHHHHHHHHHHHHHTT
T ss_pred -CCCHHHHHHHHHHHHHHHhC
Confidence 99999999999998887775
No 44
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=99.80 E-value=2.4e-19 Score=162.85 Aligned_cols=151 Identities=18% Similarity=0.090 Sum_probs=113.6
Q ss_pred cCEEEEe-ccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhhC
Q 021743 87 YTHLLTG-YIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (308)
Q Consensus 87 ~~~v~~G-~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g 165 (308)
.++++++ .++ .+.+.++++.+++. ++++++||+.. + ..+.++ .+++++|+++||..|++.|+|
T Consensus 135 ~~~v~~~~~~~----~~~~~~~~~~a~~~--g~~v~~Dp~~~-----~----~~~~~~-~ll~~~dil~~N~~E~~~l~g 198 (317)
T 2nwh_A 135 SDFLLCDANLP----EDTLTALGLIARAC--EKPLAAIAISP-----A----KAVKLK-AALGDIDILFMNEAEARALTG 198 (317)
T ss_dssp CSEEEEETTSC----HHHHHHHHHHHHHT--TCCEEEECCSH-----H----HHGGGT-TTGGGCSEEEEEHHHHHHHHC
T ss_pred CCEEEEeCCCC----HHHHHHHHHHHHhc--CCeEEEeCCCH-----H----HHHHHH-HHhhhCeEecCCHHHHHHHhC
Confidence 6766654 332 45667788888876 78999999621 1 112233 488999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC-CCCCCccHHHHHHHHHHHc
Q 021743 166 FRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGWSN 244 (308)
Q Consensus 166 ~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~GaGD~f~a~l~~~l~ 244 (308)
. +.+++.++++.|.++|++.|+||+|. +|.+++.. . +..++++.++++ +||+||||+|+|+|+++|+
T Consensus 199 ~---~~~~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~-----~---~~~~~~~~~~v~~vdt~GAGDaf~a~~~~~l~ 266 (317)
T 2nwh_A 199 E---TAENVRDWPNILRKAGLSGGVVTRGA-SEVVAFNG-----T---EKAILHPPLIREVKDVTGAGDAMASGYLAAIA 266 (317)
T ss_dssp --------CTTHHHHHHHTTCCCEEEEETT-TEEEEECS-----S---CEEEECCCCSSSCSCCCCSSHHHHHHHHHHHH
T ss_pred C---ChhHHHHHHHHHHHcCCCEEEEEECC-CcEEEEcC-----C---CceEEeCCCCccccCCCChhHHHHHHHHHHHH
Confidence 6 23456677888888999999999995 88776532 0 234566666665 5999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHH
Q 021743 245 KYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 245 ~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
+ |.++++|+++|+++++.++.
T Consensus 267 ~-g~~~~~a~~~A~~~aa~~v~ 287 (317)
T 2nwh_A 267 E-GKTIREALRQGAAAAAITVQ 287 (317)
T ss_dssp T-TCCHHHHHHHHHHHHHHHHS
T ss_pred c-CCCHHHHHHHHHHHHHHHHc
Confidence 8 99999999999998888775
No 45
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=99.80 E-value=2e-19 Score=165.88 Aligned_cols=155 Identities=17% Similarity=0.163 Sum_probs=120.7
Q ss_pred cCEE-EEeccC-CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcc--cceEEcCCHHHHHH
Q 021743 87 YTHL-LTGYIG-SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP--VASMLTPNQFEAEQ 162 (308)
Q Consensus 87 ~~~v-~~G~l~-~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~--~~diitpN~~E~~~ 162 (308)
++++ +.|++. ++...+.+.++++.++++ +.++++||.. .+..+...+.+++ +++ ++|+++||+.|++.
T Consensus 172 ~~~v~~~G~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~-----~~~~~~~~~~l~~-ll~~~~~dil~~N~~Ea~~ 243 (352)
T 4e3a_A 172 AKVTYFEGYLWDPPRAKEAILDCARIAHQH--GREMSMTLSD-----SFCVDRYRGEFLD-LMRSGKVDIVFANRQEALS 243 (352)
T ss_dssp EEEEEEEGGGGSSSSHHHHHHHHHHHHHHT--TCEEEEECCC-----HHHHHHHHHHHHH-HHHTTSCCEEEEEHHHHHH
T ss_pred CCEEEEeeeecCCchHHHHHHHHHHHHHHc--CCEEEEECCc-----hhhHHHHHHHHHH-HhcccCCcEEEeCHHHHHH
Confidence 5654 458864 445677888999999887 7899999942 1112233445555 788 89999999999999
Q ss_pred hhCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC--CCCCCccHHHHHHHH
Q 021743 163 LTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP--AYFTGTGDLMTALLL 240 (308)
Q Consensus 163 L~g~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~t~GaGD~f~a~l~ 240 (308)
|+|.+ +.+++++.|.+ +++.|+||.|. +|+++... ++.++++.+++. +||+||||+|+|+|+
T Consensus 244 l~g~~-----~~~~a~~~l~~-~~~~vvvT~G~-~G~~~~~~---------~~~~~~~~~~v~~vvDttGAGDaF~agfl 307 (352)
T 4e3a_A 244 LYQTD-----DFEEALNRIAA-DCKIAAVTMSE-NGAVILKG---------RERYYVNAIRIREVVDTTGAGDLFASGFL 307 (352)
T ss_dssp HTTCS-----CHHHHHHHHHH-HSSEEEEECGG-GCEEEEET---------TEEEEECCCCCSCCSCCTTHHHHHHHHHH
T ss_pred HhCCC-----CHHHHHHHHhc-CCCEEEEEECC-CceEEEEC---------CEEEEECCccCCCCcCCCChHHHHHHHHH
Confidence 99973 45566666665 68999999995 89887643 456777777764 599999999999999
Q ss_pred HHHccCCCCHHHHHHHHHHHHHHHHH
Q 021743 241 GWSNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 241 ~~l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
++|++ |.++++|+++|+++++.+++
T Consensus 308 ~~l~~-g~~l~~a~~~A~~aAa~~v~ 332 (352)
T 4e3a_A 308 YGYTQ-GRSLEDCGKLGCLAAGIVIQ 332 (352)
T ss_dssp HHHHT-TCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHc-CCCHHHHHHHHHHHHHHHHc
Confidence 99998 99999999999998887775
No 46
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=99.80 E-value=9.3e-19 Score=159.44 Aligned_cols=155 Identities=20% Similarity=0.189 Sum_probs=118.3
Q ss_pred cCEEE-EeccCCH-hHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhh
Q 021743 87 YTHLL-TGYIGSV-SFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (308)
Q Consensus 87 ~~~v~-~G~l~~~-~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~ 164 (308)
.+.+. .|++... ...+.+.++++.++++ + .+++|+++++. +| +..+.+++ +++.+|+++||+.|++.|+
T Consensus 136 ~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~--~-~~~~d~~~~~~--~~---~~~~~~~~-~l~~~dil~~N~~E~~~l~ 206 (325)
T 3h49_A 136 AKLLSLASIFNSPLLDGKALTEIFTQAKAR--Q-MIICADMIKPR--LN---ETLDDICE-ALSYVDYLFPNFAEAKLLT 206 (325)
T ss_dssp CSEEEEEEETTSTTSCHHHHHHHHHHHHHT--T-CEEEEEECCCS--SC---CCHHHHHH-HHTTCSEEECBHHHHHHHH
T ss_pred CCEEEEecccCCcccCHHHHHHHHHHHHhc--C-CEEEecCCchh--hh---hHHHHHHH-HHhhCCEEecCHHHHHHHh
Confidence 56554 4554322 2345677888888876 5 68888876642 22 12344554 8899999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEeccc-C-CCCCCccHHHHHHHHHH
Q 021743 165 GFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKI-P-AYFTGTGDLMTALLLGW 242 (308)
Q Consensus 165 g~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~t~GaGD~f~a~l~~~ 242 (308)
|.+ +.+++++.|.++|++.|+||.|. +|+++... ++.++++.++. + +||+||||+|+|+|+++
T Consensus 207 g~~-----~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~---------~~~~~~~~~~~~~vvDttGAGDaf~ag~~~~ 271 (325)
T 3h49_A 207 GKE-----TLDEIADCFLACGVKTVVIKTGK-DGCFIKRG---------DMTMKVPAVAGITAIDTIGAGDNFASGFIAA 271 (325)
T ss_dssp TCS-----SHHHHHHHHHTTTCSEEEEECTT-SCEEEEET---------TEEEEECCCSSCCCSCCTTHHHHHHHHHHHH
T ss_pred CCC-----CHHHHHHHHHHcCCCEEEEEeCC-CCeEEEEC---------CeEEEecCcCCCCCcCCCChhHHHHHHHHHH
Confidence 974 45567788888999999999995 89887643 45566665553 4 59999999999999999
Q ss_pred HccCCCCHHHHHHHHHHHHHHHHH
Q 021743 243 SNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 243 l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
|++ |.++++|+++|+++++.++.
T Consensus 272 l~~-g~~~~~a~~~A~~~aa~~v~ 294 (325)
T 3h49_A 272 LLE-GKNLRECARFANATAAISVL 294 (325)
T ss_dssp HHT-TCCHHHHHHHHHHHHHHHHT
T ss_pred HHc-CCCHHHHHHHHHHHHHHHHc
Confidence 998 99999999999998877775
No 47
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=99.79 E-value=2.1e-19 Score=167.44 Aligned_cols=166 Identities=13% Similarity=0.081 Sum_probs=122.5
Q ss_pred ccCEEEE-eccCCHhHHHHHHHHHHHHHh-cCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHh
Q 021743 86 YYTHLLT-GYIGSVSFLNTILQVVEKLRS-INPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQL 163 (308)
Q Consensus 86 ~~~~v~~-G~l~~~~~~~~~~~~l~~~k~-~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L 163 (308)
.++++.+ |+.+. ...+.+.++++.+++ + ++++++||. +..| .++..+.+++ +++++|+++||+.|++.|
T Consensus 180 ~~~~v~~~g~~~~-~~~~~~~~~~~~a~~~~--g~~v~~d~~----~~~~-~~~~~~~l~~-ll~~~dil~pN~~Ea~~L 250 (383)
T 2abs_A 180 GALIFYATAYTLT-ATPKNALEVAGYAHGIP--NAIFTLNLS----APFC-VELYKDAMQS-LLLHTNILFGNEEEFAHL 250 (383)
T ss_dssp TCCEEEEEGGGGT-TCHHHHHHHHHHHHTST--TCEEEEECC----CHHH-HHHCHHHHHH-HHHTCSEEEEEHHHHHHH
T ss_pred cCCEEEEeeeccc-CCHHHHHHHHHHHHHhc--CCEEEEeCC----cHHH-HHHHHHHHHH-HHhhCCEEeCCHHHHHHH
Confidence 3676655 66543 335678888898887 6 788999984 2222 2333455554 889999999999999999
Q ss_pred hCCC-CCC-----------HHHHHHHHHHHHH------c-CCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEeccc
Q 021743 164 TGFR-IGS-----------EADGREACKILHA------A-GPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKI 224 (308)
Q Consensus 164 ~g~~-~~~-----------~~d~~~~~~~l~~------~-g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (308)
+|.. +.+ .+++.++++.|.+ + |++.|+||+|. +|++++...... . ++.++++.+++
T Consensus 251 ~g~~~~~~~~~~~~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~-~Ga~~~~~~~~~-~---~~~~~~~~~~v 325 (383)
T 2abs_A 251 AKVHNLVAAEKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGH-NPVIAAEQTADG-T---VVVHEVGVPVV 325 (383)
T ss_dssp HHHHTCC----------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTT-SCEEEEEECTTS-C---EEEEEECCCCC
T ss_pred hcccCcccccccccccccccccHHHHHHHHHhccccccccCCCEEEEEcCC-CCeEEEEeecCC-C---CeEEEecCccC
Confidence 8753 221 5678888888887 3 89999999995 898776310000 0 34556666555
Q ss_pred ---C-CCCCCccHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHH
Q 021743 225 ---P-AYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 225 ---~-~~t~GaGD~f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
+ +||+||||+|+|+|+++|++ |.++++|+++|+++++.++.
T Consensus 326 ~~~~vvDttGAGDaF~ag~~~~l~~-g~~l~~al~~A~a~aa~~v~ 370 (383)
T 2abs_A 326 AAEKIVDTNGAGDAFVGGFLYALSQ-GKTVKQCIMCGNACAQDVIQ 370 (383)
T ss_dssp CGGGCCCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHT
T ss_pred CcCCcCcCCChHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHh
Confidence 4 59999999999999999998 99999999999998888775
No 48
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=99.79 E-value=7.7e-19 Score=161.34 Aligned_cols=146 Identities=15% Similarity=0.125 Sum_probs=116.1
Q ss_pred cCEEEEec-cCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhhC
Q 021743 87 YTHLLTGY-IGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (308)
Q Consensus 87 ~~~v~~G~-l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g 165 (308)
++++.++. ++ +.+.++++.+++. ++++++||... .+.+++.+++++|+++||.+|++.|+|
T Consensus 158 ~~~v~~~~~~~-----~~~~~~~~~a~~~--g~~v~~Dp~~~-----------~~~~~~~ll~~~dil~~N~~Ea~~l~g 219 (343)
T 2rbc_A 158 FDAVLVDVRWP-----ELALDVLTVARAL--GKPAILDGDVA-----------PVETLEGLAPAATHIVFSEPAATRLTG 219 (343)
T ss_dssp CSEEEECSSSH-----HHHHHHHHHHHHT--TCCEEEEECSC-----------CHHHHHHHGGGCSEEEEEHHHHHHHHC
T ss_pred CCEEEEcCCCH-----HHHHHHHHHHHHC--CCEEEEECCcc-----------ccccHHHHHhcCCEEEeCHHHHHHHcC
Confidence 67776653 32 3566778888876 78999999521 123332278999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCC-CeEEEeeeecCCcEEEEeeeccCCCCCC--cEEEEEecccC-CCCCCccHHHHHHHHH
Q 021743 166 FRIGSEADGREACKILHAAGP-AKVVITSINIDGNLFLIGSHQKEKGQSP--EQFKIVIPKIP-AYFTGTGDLMTALLLG 241 (308)
Q Consensus 166 ~~~~~~~d~~~~~~~l~~~g~-~~Vvit~g~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~t~GaGD~f~a~l~~ 241 (308)
.+ ++.++++.|.++|+ +.|+||+|. +|++++.. + +.++++.++++ +||+||||+|+|+|++
T Consensus 220 ~~-----~~~~~~~~l~~~g~~~~VvvT~G~-~G~~~~~~---------~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~ 284 (343)
T 2rbc_A 220 LE-----TVKDMLPVLHARYPQTFIAVTAGP-AGCWWTEA---------DDPTVHFQTTMQVEAVDTLAAGDIFHGTFAL 284 (343)
T ss_dssp CS-----SHHHHHHHHHHHSTTSEEEEECGG-GCEEEECT---------TCCCEEEECCCCCCCSCCTTHHHHHHHHHHH
T ss_pred CC-----CHHHHHHHHHHhCCCceEEEEECC-cceEEEeC---------CCceeEEecCCCCccccCCChHHHHHHHHHH
Confidence 74 56677888888999 999999995 88876532 3 56667766666 5999999999999999
Q ss_pred HHccCCCCHHHHHHHHHHHHHHHHH
Q 021743 242 WSNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 242 ~l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
+|++ |.++++|+++|+++++.++.
T Consensus 285 ~l~~-g~~~~~a~~~A~~~aa~~v~ 308 (343)
T 2rbc_A 285 AMAE-GMQSRAAVRLSSVAAALKCT 308 (343)
T ss_dssp HHHT-TCCHHHHHHHHHHHHHHHHT
T ss_pred HHHc-CCCHHHHHHHHHHHHHHHhC
Confidence 9998 99999999999998887775
No 49
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=99.79 E-value=5.3e-19 Score=160.12 Aligned_cols=155 Identities=14% Similarity=0.138 Sum_probs=119.2
Q ss_pred cCEEEE-eccC--CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCC-hhhHHHHHHhhcccce--EEcCCHHHH
Q 021743 87 YTHLLT-GYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVP-SELVSVYREKVVPVAS--MLTPNQFEA 160 (308)
Q Consensus 87 ~~~v~~-G~l~--~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~-~~~~~~l~~~ll~~~d--iitpN~~E~ 160 (308)
++++.+ |+.+ ++...+.+.++++.+++ . ++||+++. .+|.+ +...+.+++ +++++| +++||++|+
T Consensus 129 ~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~-----~-~~D~~~~~--~~~~~~~~~~~~~~~-~l~~~d~~il~~N~~E~ 199 (313)
T 2v78_A 129 SRLVHSTGITLAISDNAKEAVIKAFELAKS-----R-SLDTNIRP--KLWSSLEKAKETILS-ILKKYDIEVLITDPDDT 199 (313)
T ss_dssp SSEEEEEHHHHHHCHHHHHHHHHHHHHCSS-----E-EEECCCCG--GGSSCHHHHHHHHHH-HHHHSCEEEEEECHHHH
T ss_pred CCEEEEcCchhhcChHHHHHHHHHHHHHHH-----h-CcCCcCCh--hhcCCHHHHHHHHHH-HHHhcCeeEEECcHHHH
Confidence 676655 5544 35556777777776543 2 89998763 24432 233445554 889999 999999999
Q ss_pred HHhhCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC-CCCCCccHHHHHHH
Q 021743 161 EQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALL 239 (308)
Q Consensus 161 ~~L~g~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~GaGD~f~a~l 239 (308)
+.|+|.+ +..+++++|.++|++.|+||.|. +|+++... ++.++++.++++ +||+||||+|+|+|
T Consensus 200 ~~l~g~~-----~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~---------~~~~~~~~~~v~vvDttGAGDaF~ag~ 264 (313)
T 2v78_A 200 KILLDVT-----DPDEAYRKYKELGVKVLLYKLGS-KGAIAYKD---------NVKAFKDAYKVPVEDPTGAGDAMAGTF 264 (313)
T ss_dssp HHHHSCC-----CHHHHHHHHHHTTEEEEEEECGG-GCEEEEET---------TEEEEECCCCCCCSCCTTHHHHHHHHH
T ss_pred HHHhCCC-----CHHHHHHHHHhCCCCEEEEEECC-CCcEEeeC---------CcEEEeCCCcCCccCCCCchHHHHHHH
Confidence 9999863 45677888888999999999995 89877632 455667666666 59999999999999
Q ss_pred HHHHccCCCCHHHHHHHHHHHHHHHHH
Q 021743 240 LGWSNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 240 ~~~l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
+++|++ |.++++|+++|+++++.++.
T Consensus 265 ~~~l~~-g~~~~~a~~~a~~~aa~~v~ 290 (313)
T 2v78_A 265 VSLYLQ-GKDIEYSLAHGIAASTLVIT 290 (313)
T ss_dssp HHHHHT-TCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHc-CCCHHHHHHHHHHHHHHHhc
Confidence 999998 99999999999998888775
No 50
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=99.78 E-value=6.1e-19 Score=159.52 Aligned_cols=154 Identities=15% Similarity=0.149 Sum_probs=118.7
Q ss_pred cCEEEE-eccC--CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcc--cceEEcCCHHHHH
Q 021743 87 YTHLLT-GYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP--VASMLTPNQFEAE 161 (308)
Q Consensus 87 ~~~v~~-G~l~--~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~--~~diitpN~~E~~ 161 (308)
++++.+ |+.+ ++...+.+.++++.+++ . ++||+++. .+|..++..+.+++ +++ ++|+++||++|++
T Consensus 129 ~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~-----~-~~D~~~~~--~~~~~~~~~~~~~~-~l~~~~~dil~~N~~E~~ 199 (311)
T 2dcn_A 129 ADLVHSSGITLAISSTAKEAVYKAFEIASN-----R-SFDTNIRL--KLWSAEEAKREILK-LLSKFHLKFLITDTDDSK 199 (311)
T ss_dssp CSEEEEEHHHHHSCHHHHHHHHHHHHHCSS-----E-EEECCCCT--TTSCHHHHHHHHHH-HHHHCCEEEEEEEHHHHH
T ss_pred CCEEEEeCcccccChHHHHHHHHHHHHHHH-----h-CcCccCch--hhCChHHHHHHHHH-HHhhcCCcEEECCHHHHH
Confidence 676655 5543 45566777777776643 2 89998763 34433334445554 889 9999999999999
Q ss_pred HhhCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC-CCCCCccHHHHHHHH
Q 021743 162 QLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLL 240 (308)
Q Consensus 162 ~L~g~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~GaGD~f~a~l~ 240 (308)
.|+|.+ +..+++++|.++ ++.|+||.|. +|+++... ++.++++.++++ +||+||||+|+|+|+
T Consensus 200 ~l~g~~-----~~~~~~~~l~~~-~~~vvvt~G~-~G~~~~~~---------~~~~~~~~~~v~vvdttGAGDaf~a~~~ 263 (311)
T 2dcn_A 200 IILGES-----DPDKAAKAFSDY-AEIIVMKLGP-KGAIVYYD---------GKKYYSSGYQVPVEDVTGAGDALGGTFL 263 (311)
T ss_dssp HHHSCC-----CHHHHHHHHTTT-EEEEEEEEET-TEEEEEET---------TEEEEEECCCCCCSCCTTHHHHHHHHHH
T ss_pred HHhCCC-----CHHHHHHHHHHh-CCEEEEEECC-CCcEEEeC---------CcEEEeCCccccccCCCCchHHHHHHHH
Confidence 999863 456778888887 8899999995 88877642 456667777766 599999999999999
Q ss_pred HHHccCCCCHHHHHHHHHHHHHHHHH
Q 021743 241 GWSNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 241 ~~l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
++|++ |.++++|+++|+++++.++.
T Consensus 264 ~~l~~-g~~~~~a~~~a~~~aa~~v~ 288 (311)
T 2dcn_A 264 SLYYK-GFEMEKALDYAIVASTLNVM 288 (311)
T ss_dssp HHHTT-TCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHc-CCCHHHHHHHHHHHHHHHhc
Confidence 99998 99999999999998887775
No 51
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=99.78 E-value=3.6e-19 Score=161.44 Aligned_cols=151 Identities=17% Similarity=0.256 Sum_probs=116.3
Q ss_pred ccCEEEEeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhhC
Q 021743 86 YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (308)
Q Consensus 86 ~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g 165 (308)
.++++++|.++.+. ..++++.+ + .+.++++||.. +|. +...+.+++ +++++|+++||++|++.|+|
T Consensus 119 ~~~~v~~~~~~~~~----~~~~~~~~-~--~~~~v~~Dp~~-----~~~-~~~~~~~~~-~l~~~dil~~N~~E~~~l~g 184 (313)
T 3kd6_A 119 DSKFVCLGNIDPEL----QLKVLDQI-D--DPKLVVCDTMN-----FWI-EGKPEELKK-VLARVDVFIVNDSEARLLSG 184 (313)
T ss_dssp TCSEEEECSSCHHH----HHHHHTTC-S--SCSEEEEECCH-----HHH-HHCHHHHHH-HHTTCSEEEEEHHHHHHHHS
T ss_pred cCCEEEEcCCCHHH----HHHHHHHH-h--hCCEEEEcChh-----hhh-hhhHHHHHH-HHhcCCEEEeCHHHHHHHhC
Confidence 37889999886432 33445544 2 26789999921 221 223445565 88999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEeccc-C-CCCCCccHHHHHHHHHHH
Q 021743 166 FRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKI-P-AYFTGTGDLMTALLLGWS 243 (308)
Q Consensus 166 ~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~t~GaGD~f~a~l~~~l 243 (308)
.+ ++.++++.|.++|++.|+||.|. +|++++.. ++.++++.+++ + +||+||||+|+|+|+++|
T Consensus 185 ~~-----~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~---------~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l 249 (313)
T 3kd6_A 185 DP-----NLVKTARIIREMGPKTLIIKKGE-HGALLFTD---------NGIFAAPAFPLESIYDPTGAGDTFAGGFIGHL 249 (313)
T ss_dssp CS-----CHHHHHHHHHTTSCSEEEEECTT-SCEEEEET---------TEEEEECCCTTCCCSCCTTHHHHHHHHHHHHH
T ss_pred CC-----CHHHHHHHHHHcCCCEEEEeeCC-CcEEEEEC---------CceEEeCCCCCCCcCCCCCccHHHHHHHHHHH
Confidence 63 56778888999999999999995 89877643 45666776666 4 599999999999999999
Q ss_pred ccCCC-----CHHHHHHHHHHHHHHHHH
Q 021743 244 NKYRD-----NLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 244 ~~~g~-----~~~~A~~~A~a~~~~~i~ 266 (308)
++ |. ++++|+++|+++++.+++
T Consensus 250 ~~-g~~~~~~~l~~a~~~a~~~aa~~v~ 276 (313)
T 3kd6_A 250 AR-CGNTSEAEMRKAVLYGSAMASFCVE 276 (313)
T ss_dssp HH-HCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred Hc-CCCccccCHHHHHHHHHHHHHHHHe
Confidence 98 87 899999999998877775
No 52
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=99.76 E-value=3.3e-18 Score=158.82 Aligned_cols=162 Identities=12% Similarity=0.120 Sum_probs=117.8
Q ss_pred cCEEEE-eccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhhC
Q 021743 87 YTHLLT-GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (308)
Q Consensus 87 ~~~v~~-G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g 165 (308)
.+.+.+ |++. ....+.+.++++.++++ +.++++|+.. .+..+...+.+.+ +++++|+++||+.|++.|++
T Consensus 181 a~~~~~~g~~~-~~~~~~~~~~~~~a~~~--g~~v~ldls~-----~~~~~~~~~~l~~-ll~~~Dil~~Ne~Ea~~l~~ 251 (372)
T 3uq6_A 181 AQVYYIAGFVI-NTCYEGMLKIAKHSLEN--EKLFCFNLSA-----PFLSQFNTKEVDE-MISYSNIVFGNESEAEAYGE 251 (372)
T ss_dssp CSEEEEEGGGH-HHHHHHHHHHHHHHHHT--TCEEEEECCC-----HHHHHHCHHHHHH-HHTTCSEEEEEHHHHHHHHH
T ss_pred ccEEEEecccc-cccHHHHHHHHHHHHHc--CCeEeecccc-----chhhhhhHHHHHH-HhhcCCcccCCHHHHHHHhC
Confidence 555544 6654 34567778889999887 7899999842 1111222344554 88999999999999999998
Q ss_pred CCCCCHHHHHHHHHHHHH-------cCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEeccc---C-CCCCCccHH
Q 021743 166 FRIGSEADGREACKILHA-------AGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKI---P-AYFTGTGDL 234 (308)
Q Consensus 166 ~~~~~~~d~~~~~~~l~~-------~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~t~GaGD~ 234 (308)
......++..++++.+.+ .+++.|++|.|. +|.++..... .....++.+.. + +||+||||+
T Consensus 252 ~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~vvvT~G~-~G~~~~~~~~-------~~~~~~~v~~~~~~~vVDTtGAGDa 323 (372)
T 3uq6_A 252 VHGLLEDTVHATARYIADLPFADGKKRKRLVIITRGK-NPLLYTDSSD-------SEIHQFMVEQFKDDQIIDTNGAGDA 323 (372)
T ss_dssp HTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETT-EEEEEEESSC-------SSCEEECCCCCCGGGCCCCTTHHHH
T ss_pred CCCCchhHHHHHHHHHhhhhhhhhcCCceEEEEcCCC-CceEEecCCC-------ceeeeeeccCCCCCceeCCCchHHH
Confidence 654444567777777765 356789999995 7887765310 22233443332 3 599999999
Q ss_pred HHHHHHHHHccCCCCHHHHHHHHHHHHHHHHH
Q 021743 235 MTALLLGWSNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 235 f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
|+|+|+++|.+ |+++++|+++|+.+++.+++
T Consensus 324 F~agfl~~l~~-g~~l~~a~~~a~~aAa~vv~ 354 (372)
T 3uq6_A 324 FAAGFIADYIR-GKPMITSLHAAVKAAAYIIC 354 (372)
T ss_dssp HHHHHHHHHTT-TCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHc
Confidence 99999999998 99999999999999888886
No 53
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.76 E-value=1.3e-17 Score=148.31 Aligned_cols=162 Identities=15% Similarity=0.109 Sum_probs=114.7
Q ss_pred cCEEE--EeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcc--cceEEcCCHHHHHH
Q 021743 87 YTHLL--TGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP--VASMLTPNQFEAEQ 162 (308)
Q Consensus 87 ~~~v~--~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~--~~diitpN~~E~~~ 162 (308)
++++. +|+ +++...+.+.++++.+++. ++++|+||+...... + ..+..+ .+++ ++++||||..|++.
T Consensus 59 a~~lvi~~G~-~~~~~~~~~~~~~~~a~~~--~~pvVlDp~g~~~~~-~----~~~~~~-~ll~~~~~~vitPN~~E~~~ 129 (272)
T 1ekq_A 59 AGALVLNIGT-LSKESVEAMIIAGKSANEH--GVPVILDPVGAGATP-F----RTESAR-DIIREVRLAAIRGNAAEIAH 129 (272)
T ss_dssp SSEEEEECTT-CCHHHHHHHHHHHHHHHHT--TCCEEEECTTBTTBH-H----HHHHHH-HHHHHSCCSEEEECHHHHHH
T ss_pred CCEEEEECCC-CCHHHHHHHHHHHHHHHhc--CCeEEEeCCCcCccc-c----hHHHHH-HHHccCCCeEECCCHHHHHH
Confidence 55544 566 4567788889999988876 789999997542110 0 011222 3665 89999999999999
Q ss_pred hhCCC-C--------CCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC-CCCCCcc
Q 021743 163 LTGFR-I--------GSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTG 232 (308)
Q Consensus 163 L~g~~-~--------~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~GaG 232 (308)
|+|.+ . .+.++..+++++|.+++...|++|+. . .++..+ ++.++++.+... .+++|+|
T Consensus 130 L~g~~~~~~~gvd~~~~~~~~~~aa~~l~~~~~~vVv~~G~--~-~~i~~~---------~~~~~~~~~~~~~~~ttGaG 197 (272)
T 1ekq_A 130 TVGVTDWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAITGE--V-DVIADT---------SHVYTLHNGHKLLTKVTGAG 197 (272)
T ss_dssp HCC---------------HHHHHHHHHHHHHHTSEEEECSS--S-EEEECS---------SCEEEECCCCGGGGGSTTHH
T ss_pred HhCCCcccccCccCCCCHHHHHHHHHHHHHHcCCEEEEECC--C-CEEEeC---------CEEEEEcCCCccccCccCch
Confidence 99976 4 34567888899998766567777843 3 354422 345656544433 4899999
Q ss_pred HHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 021743 233 DLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVN 270 (308)
Q Consensus 233 D~f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~~t~~ 270 (308)
|+|+|++++++++ |.++.+|+++|+.+...+.+...+
T Consensus 198 D~lag~iaa~la~-g~~~~~A~~~A~~~~~~A~~~a~~ 234 (272)
T 1ekq_A 198 CLLTSVVGAFCAV-EENPLFAAIAAISSYGVAAQLAAQ 234 (272)
T ss_dssp HHHHHHHHHHHTT-CSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999998 999999999999887777776654
No 54
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=99.75 E-value=4e-18 Score=153.54 Aligned_cols=135 Identities=21% Similarity=0.114 Sum_probs=107.6
Q ss_pred ccCEEEEeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhhC
Q 021743 86 YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (308)
Q Consensus 86 ~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g 165 (308)
.+++++++...+ .+.+.++++.++++ +.++++||.... +.+. .+++.+|+++||++|++.|+|
T Consensus 131 ~~~~v~~~g~~~---~~~~~~~~~~a~~~--g~~v~~D~~~~~-----------~~~~-~ll~~~dil~~N~~E~~~l~g 193 (299)
T 3ikh_A 131 AGDILLQQGNFS---LDKTRALFQYARSR--GMTTVFNPSPVN-----------PDFC-HLWPLIDIAVVNESEAELLQP 193 (299)
T ss_dssp TTCEEEECSCSC---HHHHHHHHHHHHHT--TCEEEECCCSCC-----------GGGG-GCGGGCSEEEEEHHHHHHHCC
T ss_pred cCCEEEECCCCC---HHHHHHHHHHHHHc--CCEEEEccccch-----------hhHH-HHHhhCCEEEecHHHHHHHhc
Confidence 377776653222 45667788888876 789999996431 1123 488999999999999999988
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC-CCCCCccHHHHH-HHHHHH
Q 021743 166 FRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTA-LLLGWS 243 (308)
Q Consensus 166 ~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~GaGD~f~a-~l~~~l 243 (308)
+|++.|+||.|. +|+++... ++.++++.++++ +|++||||+|+| +|+++|
T Consensus 194 ------------------~g~~~vvvt~G~-~G~~~~~~---------~~~~~~~~~~v~vvDttGAGDaf~a~~~~~~l 245 (299)
T 3ikh_A 194 ------------------YGVKTLVITQGA-AGAWLVQE---------GQRQFCPAVPAEALDTTGAGDTFLAVMLASAL 245 (299)
T ss_dssp ------------------CSCSEEEEECGG-GCEEEECS---------SCEEEECCCCCCCSCCTTHHHHHHHHHHHHHH
T ss_pred ------------------CCCCEEEEEECC-CceEEEeC---------CceEEeCCCCCccCCCCCchHHHHHHHHHHHH
Confidence 588999999995 89877642 456677766666 599999999999 999999
Q ss_pred ccCCCCHHH-HHHHHHHHHHHHHH
Q 021743 244 NKYRDNLDI-AAELAVSSLQALLQ 266 (308)
Q Consensus 244 ~~~g~~~~~-A~~~A~a~~~~~i~ 266 (308)
++ |.++++ |+++|+++++.+++
T Consensus 246 ~~-g~~~~~~a~~~a~~~aa~~v~ 268 (299)
T 3ikh_A 246 LR-GVAPDALALAHASRAAAITVS 268 (299)
T ss_dssp HT-TSSSCHHHHHHHHHHHHHHHH
T ss_pred Hc-CCCHHHHHHHHHHHHHHHHhC
Confidence 98 999999 99999998888876
No 55
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=99.74 E-value=5.6e-18 Score=152.66 Aligned_cols=147 Identities=16% Similarity=0.092 Sum_probs=111.5
Q ss_pred cCEEEEeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhhCC
Q 021743 87 YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGF 166 (308)
Q Consensus 87 ~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~ 166 (308)
++++.++... . +.+.++++.++++ + ++++||+.+. ..| . .+.+++ +++++|+++||.+|++.|+|.
T Consensus 131 ~~~v~~~~~~---~-~~~~~~~~~a~~~--g-~v~~D~~~~~--~~~-~---~~~~~~-~l~~~dil~~N~~E~~~l~g~ 196 (302)
T 2c4e_A 131 TEIVHIATGD---P-EFNLKCAKKAYGN--N-LVSFDPGQDL--PQY-S---KEMLLE-IIEHTNFLFMNKHEFERASNL 196 (302)
T ss_dssp EEEEEECSSC---H-HHHHHHHHHHBTT--B-EEEECCGGGG--GGC-C---HHHHHH-HHHTCSEEEEEHHHHHHHHHH
T ss_pred CCEEEEeCCC---c-HHHHHHHHHHHhc--C-CEEEeCchhh--hhh-h---HHHHHH-HHhcCCEEEcCHHHHHHHhCC
Confidence 6666665311 1 6677888888776 7 9999998542 122 1 234454 889999999999999999985
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC--CCCCCccHHHHHHHHHHHc
Q 021743 167 RIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP--AYFTGTGDLMTALLLGWSN 244 (308)
Q Consensus 167 ~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~t~GaGD~f~a~l~~~l~ 244 (308)
+..+.+ +|+++ ++.|+||+|. +|++++.. ++.++++.++++ +|++||||+|+|+|+++|+
T Consensus 197 ~~~~~~-------~l~~~-~~~vvvt~G~-~G~~~~~~---------~~~~~~~~~~v~~~vdt~GAGDaf~a~~~~~l~ 258 (302)
T 2c4e_A 197 LNFEID-------DYLER-VDALIVTKGS-KGSVIYTK---------DKKIEIPCIKAGKVIDPTGAGDSYRAGFLSAYV 258 (302)
T ss_dssp HTCCHH-------HHHTT-CSEEEEECGG-GCEEEECS---------SCEEEECCCCCSCCSCCTTHHHHHHHHHHHHHH
T ss_pred CCccHH-------HHHhc-CCEEEEEECC-CceEEEeC---------CcEEEeCCccCCcCCcCCCchHHHHHHHHHHHH
Confidence 432211 56667 8999999995 88876632 456667777776 4999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHH
Q 021743 245 KYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 245 ~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
+ |.++++|+++|+++++.++.
T Consensus 259 ~-g~~~~~a~~~a~~~aa~~~~ 279 (302)
T 2c4e_A 259 K-GYDLEKCGLIGAATASFVVE 279 (302)
T ss_dssp T-TCCHHHHHHHHHHHHHHHTT
T ss_pred c-CCCHHHHHHHHHHHHHHHHc
Confidence 8 99999999999998887775
No 56
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=99.74 E-value=1.2e-17 Score=152.76 Aligned_cols=148 Identities=20% Similarity=0.130 Sum_probs=111.4
Q ss_pred cCEEEEeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhhCC
Q 021743 87 YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGF 166 (308)
Q Consensus 87 ~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~ 166 (308)
++++.++... .+.+.++++.++++ ++++++||++++. +| +. +.++ .+++++|+++||.+|++.|+|.
T Consensus 149 ~~~v~~~~~~----~~~~~~~~~~a~~~--g~~v~~D~~~~~~--~~-~~---~~l~-~~l~~~dil~~N~~E~~~l~g~ 215 (334)
T 2pkf_A 149 PELVIIGAND----PEAMFLHTEECRKL--GLAFAADPSQQLA--RL-SG---EEIR-RLVNGAAYLFTNDYEWDLLLSK 215 (334)
T ss_dssp CSEEEEESCC----HHHHHHHHHHHHHH--TCCEEEECGGGGG--TS-CH---HHHH-TTTTTCSEEEEEHHHHHHHHHH
T ss_pred CCEEEEcCCC----hHHHHHHHHHHHhc--CCeEEEeccchhh--hh-hH---HHHH-HHHhcCCEEecCHHHHHHHhcc
Confidence 6766653311 24566778888876 7899999998742 33 22 3344 4899999999999999999986
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCc-EEEEEecccC--CCCCCccHHHHHHHHHHH
Q 021743 167 RIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPE-QFKIVIPKIP--AYFTGTGDLMTALLLGWS 243 (308)
Q Consensus 167 ~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~t~GaGD~f~a~l~~~l 243 (308)
...+.+ .+.+. ++.|+||.|. +|++++.. ++ .++++.++++ +||+||||+|+|+|+++|
T Consensus 216 ~~~~~~-------~l~~~-~~~vvvt~G~-~G~~~~~~---------~~~~~~~~~~~v~~vvDttGAGDaF~a~~~~~l 277 (334)
T 2pkf_A 216 TGWSEA-------DVMAQ-IDLRVTTLGP-KGVDLVEP---------DGTTIHVGVVPETSQTDPTGVGDAFRAGFLTGR 277 (334)
T ss_dssp HCCCHH-------HHHTT-CSCEEEECGG-GCEEEECT---------TSCEEEECCCCCSCCCCCTTHHHHHHHHHHHHH
T ss_pred CCCCHH-------HHHhc-CCEEEEEeCC-CCeEEEeC---------CCcEEEeCCcCCCCCCCCCCchHHHHHHHHHHH
Confidence 433322 23443 8899999995 88876532 34 6677776665 499999999999999999
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHH
Q 021743 244 NKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 244 ~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
++ |.++++|+++|+++++.+++
T Consensus 278 ~~-g~~~~~a~~~A~~~aa~~v~ 299 (334)
T 2pkf_A 278 SA-GLGLERSAQLGSLVAVLVLE 299 (334)
T ss_dssp HT-TCCHHHHHHHHHHHHHHHHT
T ss_pred Hc-CCCHHHHHHHHHHHHHHHHh
Confidence 98 99999999999998888775
No 57
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=99.73 E-value=1.6e-17 Score=151.50 Aligned_cols=149 Identities=19% Similarity=0.153 Sum_probs=111.4
Q ss_pred ccCEEEEeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhhC
Q 021743 86 YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (308)
Q Consensus 86 ~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g 165 (308)
.++++.++.- ..+.+.++++.++++ ++++++||+++. .+| +. +.+++ +++.+|+++||++|++.|+|
T Consensus 135 ~~~~v~~~~~----~~~~~~~~~~~a~~~--g~~v~~D~~~~~--~~~-~~---~~~~~-~l~~~dil~~N~~Ea~~l~g 201 (326)
T 3b1n_A 135 DIKLAIVGPD----GFQGMVQHTEELAQA--GVPFIFDPGQGL--PLF-DG---ATLRR-SIELATYIAVNDYEAKLVCD 201 (326)
T ss_dssp SCSEEEECSC----CHHHHHHHHHHHHHH--TCCEEECCGGGG--GGC-CH---HHHHH-HHHHCSEEEEEHHHHHHHHH
T ss_pred CCCEEEECCc----cHHHHHHHHHHHHHC--CCEEEEeCchhh--hhc-cH---HHHHH-HHHhCCEEecCHHHHHHHhC
Confidence 3677665321 135667788888876 789999998864 233 22 33444 78899999999999999987
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC--CCCCCccHHHHHHHHHHH
Q 021743 166 FRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP--AYFTGTGDLMTALLLGWS 243 (308)
Q Consensus 166 ~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~t~GaGD~f~a~l~~~l 243 (308)
....+.++ +.+ +++.|+||.|. +|++++.. ++.++++.++++ +||+||||+|+|+|+++|
T Consensus 202 ~~~~~~~~-------l~~-~~~~vvvT~G~-~Ga~~~~~---------~~~~~~~~~~v~~vvDttGAGDaF~ag~l~~l 263 (326)
T 3b1n_A 202 KTGWSEDE-------IAS-RVQALIITRGE-HGATIRHR---------DGTEQIPAVRAERVIDPTGCGDAFRGGLLYGI 263 (326)
T ss_dssp HHCCCHHH-------HHT-TSSEEEEECGG-GCEEEEET---------TEEEEECCCCCSCCCCCTTHHHHHHHHHHHHH
T ss_pred CCCCCHHH-------HHh-cCCEEEEecCC-CceEEEEC---------CcEEEeCCCCCCCCCCCCCchHHHHHHHHHHH
Confidence 54333222 333 37899999995 89877643 455667666665 499999999999999999
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHH
Q 021743 244 NKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 244 ~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
++ |.++++|+++|+++++.++.
T Consensus 264 ~~-g~~~~~a~~~A~~~aa~~v~ 285 (326)
T 3b1n_A 264 EH-GFDWATAGRLASLMGALKIA 285 (326)
T ss_dssp HT-TCCHHHHHHHHHHHHHHHHT
T ss_pred Hc-CCCHHHHHHHHHHHHHHHHc
Confidence 98 99999999999998887775
No 58
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=99.72 E-value=2.3e-17 Score=149.36 Aligned_cols=150 Identities=17% Similarity=0.144 Sum_probs=113.3
Q ss_pred cCEEE-Eec-cCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCC--ChhhHHHHHHhhcccceEEcCCHHHHHH
Q 021743 87 YTHLL-TGY-IGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYV--PSELVSVYREKVVPVASMLTPNQFEAEQ 162 (308)
Q Consensus 87 ~~~v~-~G~-l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~--~~~~~~~l~~~ll~~~diitpN~~E~~~ 162 (308)
.+.+. .|+ +..+...+.+.++++.+++ ++++++||+.+. .+|. .++..+.+++ +++.+|+++||++|++.
T Consensus 125 ~~~~~~~g~~~~~~~~~~~~~~~~~~a~~---~~~v~~Dp~~~~--~~~~~~~~~~~~~~~~-~l~~~di~~~N~~E~~~ 198 (313)
T 3ewm_A 125 AKIVNFGSVILARNPSRETVMKVIKKIKG---SSLIAFDVNLRL--DLWRGQEEEMIKVLEE-SIKLADIVKASEEEVLY 198 (313)
T ss_dssp CSEEEEESGGGGSTTHHHHHHHHHHHHBT---TBEEEEECCCCG--GGGTTCHHHHHHHHHH-HHHHCSEEEEEHHHHHH
T ss_pred CCEEEEcCcccCCcchHHHHHHHHHHhcc---CCEEEEeCCCCh--HHcCCCHHHHHHHHHH-HHhhCCEEecCHHHHHH
Confidence 56544 455 3445567788888888873 689999997653 2443 2344455554 88999999999999999
Q ss_pred hhCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC-CCCCCccHHHHHHHHH
Q 021743 163 LTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLG 241 (308)
Q Consensus 163 L~g~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~GaGD~f~a~l~~ 241 (308)
|++.... ..+...|+||.|. +|++++.. ++.++++.++++ +|++||||+|+|+|++
T Consensus 199 l~~~~~~-------------~~~~~~vviT~G~-~G~~~~~~---------~~~~~~~~~~v~vvDttGAGDaf~a~~~~ 255 (313)
T 3ewm_A 199 LENQGVE-------------VKGSMLTAITLGP-KGCRLIKN---------ETVVDVPSYNVNPLDTTGAGDAFMAALLV 255 (313)
T ss_dssp HHTTTCC-------------CCCSSEEEEECGG-GEEEEEET---------TEEEEEECCCCCCSCCTTHHHHHHHHHHH
T ss_pred HhccCcc-------------ccCceEEEEEECC-CCeEEEEC---------CeeEEcCCCCcccCCCCCchHHHHHHHHH
Confidence 9986432 1245568999995 88877643 456677776666 5999999999999999
Q ss_pred HHc--cCCCCHHHHHHHHHHHHHHHHH
Q 021743 242 WSN--KYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 242 ~l~--~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
+|+ + |.++++|+++|+++++.++.
T Consensus 256 ~l~~~~-g~~l~~a~~~A~~~aa~~v~ 281 (313)
T 3ewm_A 256 GILKLK-GLDLLKLGKFANLVAALSTQ 281 (313)
T ss_dssp HHHHSS-SCCHHHHHHHHHHHHHHHTT
T ss_pred HHHhcC-CCCHHHHHHHHHHHHHHHHc
Confidence 998 8 99999999999998877765
No 59
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=99.72 E-value=4.3e-17 Score=149.83 Aligned_cols=165 Identities=13% Similarity=0.104 Sum_probs=110.0
Q ss_pred cCEEEEe-cc--CCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHh
Q 021743 87 YTHLLTG-YI--GSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQL 163 (308)
Q Consensus 87 ~~~v~~G-~l--~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L 163 (308)
.+.+.++ +. .++...+.+.++++.+|++ +++|++||++++ .+|..++..+.+.+ +++++|+++||+.|++.|
T Consensus 151 ~~~~~~~g~~l~~~~~~~~~~~~~~~~ak~~--g~~v~~D~n~r~--~lw~~~~~~~~~~~-~l~~~dil~~N~~Ea~~l 225 (351)
T 4gm6_A 151 IRVLHVSGITIALSTFWLEMVVKIIREAKRN--GIKISFDMNYRA--KLWELEAAKRAYQQ-LLPLVDYCSAGQMDAVAF 225 (351)
T ss_dssp EEEEEEEHHHHHHCHHHHHHHHHHHHHHHHT--TCEEEEECCCCT--TTSCHHHHHHHHHH-HGGGCSEEECCHHHHHHT
T ss_pred cccceecccchhhchhHHHHHHHHHHHHHHc--CCCcccCCCcCc--hhhhhhhHHHHHHH-HHHhCCccccCHHHHHHH
Confidence 5666554 32 2566678889999999987 899999999885 36655555666665 899999999999999999
Q ss_pred hCCCCCCHHHHHHHHHHHHH----cCCCeEEEeeee-cCCcEEEEeeeccCCCCCCcEEEEEe-cccC-CCCCCccHHHH
Q 021743 164 TGFRIGSEADGREACKILHA----AGPAKVVITSIN-IDGNLFLIGSHQKEKGQSPEQFKIVI-PKIP-AYFTGTGDLMT 236 (308)
Q Consensus 164 ~g~~~~~~~d~~~~~~~l~~----~g~~~Vvit~g~-~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~t~GaGD~f~ 236 (308)
+|......+......+.+.. .+.+.++++.+. ..+..+... ++.++.+. +..+ +||+||||+|+
T Consensus 226 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---------~~~~~~~~~~~~~VvDttGAGDaF~ 296 (351)
T 4gm6_A 226 FEISSETTDYYQAMHDKYPNIELFYATKRTVISASHHLLQGHLWTQ---------GECWESEEYAIYPIVDRVGGGDAYT 296 (351)
T ss_dssp SCCCTTCSCHHHHHHHHCTTCCEEEEEEEEEEETTEEEEEEEEEET---------TEEEEEEEEEECSCSCCTTHHHHHH
T ss_pred hCCCCchhHHHHHHHhhhhhhhhhhccccceeeeccCCceEEEEeC---------CceEEeCCCCCCCcCCCCChhHHHH
Confidence 99764332222222222111 112223333221 012222221 34444443 3335 49999999999
Q ss_pred HHHHHHHccCCCCHHHHHHHHHHHHHHHHH
Q 021743 237 ALLLGWSNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 237 a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
|+|+++|++ |.++++|+++|+++++.++.
T Consensus 297 ag~l~~l~~-g~~~~~al~~A~aaaal~v~ 325 (351)
T 4gm6_A 297 AAVLHGILS-EWRPDETVKFATAAAGLKHS 325 (351)
T ss_dssp HHHHHHHHT-TCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHC-CCCHHHHHHHHHHHHHHHhC
Confidence 999999998 99999999999998766553
No 60
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.70 E-value=2.9e-17 Score=147.76 Aligned_cols=158 Identities=16% Similarity=0.119 Sum_probs=113.3
Q ss_pred ccCEEEEeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccc-cC--CCcCCChhhHHHHHHhhcccceEEcCCHHHHHH
Q 021743 86 YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG-DE--GKLYVPSELVSVYREKVVPVASMLTPNQFEAEQ 162 (308)
Q Consensus 86 ~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~-~~--g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~ 162 (308)
..+++.+|.+...+ ...++++.++++ +.++++||+.. .. +..+ .....+.+++ +++.+|+++||++|++.
T Consensus 119 ~~~~v~~~~~~~~~---~~~~~~~~~~~~--g~~v~~D~~~~~~~~~~~~~-~~~~~~~~~~-~l~~~dil~~N~~E~~~ 191 (298)
T 1vk4_A 119 EGEAVHINPLWYGE---FPEDLIPVLRRK--VMFLSADAQGFVRVPENEKL-VYRDWEMKEK-YLKYLDLFKVDSREAET 191 (298)
T ss_dssp CSSEEEECCSSTTS---SCGGGHHHHHHH--CSEEEEETHHHHEEEETTEE-EECCCTTHHH-HGGGCSEEEEEHHHHHH
T ss_pred CCCEEEECCccccc---ccHHHHHHHHHc--CCEEEEecCccccccccccc-cccchHHHHh-hcccCCEEecCHHHHHH
Confidence 37788888763221 123455666665 78999999731 00 0000 0000012343 88999999999999999
Q ss_pred hhCCCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC-CCCCCccHHHHHHHHH
Q 021743 163 LTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLG 241 (308)
Q Consensus 163 L~g~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~GaGD~f~a~l~~ 241 (308)
|+|.+ ++.++++.|.++|++.|+||+ . +|++++. ++.++++.++++ +||+||||+|+|+|++
T Consensus 192 l~g~~-----~~~~~~~~l~~~g~~~vvvT~-~-~G~~~~~----------~~~~~~~~~~v~vvDttGAGDaF~a~~~~ 254 (298)
T 1vk4_A 192 LTGTN-----DLRESCRIIRSFGAKIILATH-A-SGVIVFD----------GNFYEASFRSWSLEGRTGRGDTCTAAFLV 254 (298)
T ss_dssp HHSCS-----CHHHHHHHHHHTTCSSEEEEE-T-TEEEEES----------SSEEEEECCCSSGGGGTTHHHHHHHHHHH
T ss_pred HhCCC-----CHHHHHHHHHhcCCCEEEEEc-C-CCcEEEe----------CCEEEeccCCcccCCCcCccHHHHHHHHH
Confidence 99974 466778888889999999999 5 8887652 234566666666 5999999999999999
Q ss_pred HHccCCCCHHHHHHHHHHHHHHHHHH
Q 021743 242 WSNKYRDNLDIAAELAVSSLQALLQR 267 (308)
Q Consensus 242 ~l~~~g~~~~~A~~~A~a~~~~~i~~ 267 (308)
+|++.|.++++|+++|+++++.++..
T Consensus 255 ~l~~~g~~~~~a~~~A~a~aa~~v~~ 280 (298)
T 1vk4_A 255 GFVFKKMSIEKATKFAAAVTSVKMRH 280 (298)
T ss_dssp HHHTSCCCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHcc
Confidence 99842799999999999988887763
No 61
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=99.70 E-value=8.5e-17 Score=142.36 Aligned_cols=163 Identities=14% Similarity=0.104 Sum_probs=116.4
Q ss_pred cCEEEEec-cCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcc-cceEEcCCHHHHHHhh
Q 021743 87 YTHLLTGY-IGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP-VASMLTPNQFEAEQLT 164 (308)
Q Consensus 87 ~~~v~~G~-l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~-~~diitpN~~E~~~L~ 164 (308)
+|++.+|. +++.+..+.+..+++.+++. +.|+|+||++.... . ...+.... ++. .+++||||..|++.|+
T Consensus 57 ~dalvi~~G~~~~~~~~~~~~~~~~a~~~--~~pvVlDpv~~~~~-~-~~~~~~~~----ll~~~~~vITPN~~E~~~L~ 128 (265)
T 1v8a_A 57 ADAVVINIGTLDSGWRRSMVKATEIANEL--GKPIVLDPVGAGAT-K-FRTRVSLE----ILSRGVDVLKGNFGEISALL 128 (265)
T ss_dssp CSEEEEECTTCCHHHHHHHHHHHHHHHHH--TCCEEEECTTBTTB-H-HHHHHHHH----HHHHCCSEEEEEHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHHc--CCcEEEcCcccccc-c-cCHHHHHH----HHHhCCcEEcCCHHHHHHHh
Confidence 67777654 34777777888888888776 78999999865310 1 11122222 332 3899999999999999
Q ss_pred CCCC-----C----CHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccCC-CCCCccHH
Q 021743 165 GFRI-----G----SEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIPA-YFTGTGDL 234 (308)
Q Consensus 165 g~~~-----~----~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~t~GaGD~ 234 (308)
|.+. . ..++..+++++|.+++...|++|+.. .++..+ ++.+.++...... +++|+||+
T Consensus 129 g~~~~~~gvd~~~~~~~~~~~aa~~la~~~~~~VvlkG~~---d~i~~~---------~~~~~~~~g~~~~~~~~GtGD~ 196 (265)
T 1v8a_A 129 GEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVTGAV---DYVSDG---------RRTFAVYNGHELLGRVTGTGCM 196 (265)
T ss_dssp HHHC----------CHHHHHHHHHHHHHHTTSEEEEESSS---EEEECS---------SCEEEECCCCGGGGGSTTHHHH
T ss_pred CCcccccCcCcccccHHHHHHHHHHHHHHhCcEEEEcCCC---cEEEcC---------CEEEEEcCCCcCcCCccChhHH
Confidence 8653 1 22677888999987776788999642 355422 4555555433334 89999999
Q ss_pred HHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 021743 235 MTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVND 271 (308)
Q Consensus 235 f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~~t~~~ 271 (308)
|+|++++++++ |.+ .+|+..|..+...+.+...+.
T Consensus 197 Lsg~iaa~lA~-g~~-~~Aa~~a~~~~~~Ag~~a~~~ 231 (265)
T 1v8a_A 197 VAALTGAFVAV-TEP-LKATTSALVTFGIAAEKAYEE 231 (265)
T ss_dssp HHHHHHHHHTT-SCH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhc-CCC-HHHHHHHHHHHHHHHHHHHHh
Confidence 99999999998 999 999999988888888777653
No 62
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=99.69 E-value=7.1e-17 Score=146.15 Aligned_cols=138 Identities=17% Similarity=0.168 Sum_probs=107.4
Q ss_pred ccCEEEEeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhhC
Q 021743 86 YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (308)
Q Consensus 86 ~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g 165 (308)
.++++.++. ....+.+.++++.++++ +.++++||+.... ..+.+++ +++.+|+++||++|++.|+|
T Consensus 143 ~~~~v~~~~---~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~--------~~~~~~~-ll~~~dil~~N~~Ea~~l~g 208 (310)
T 3go6_A 143 NCDVLLTQL---EIPVATALAAARAAQSA--DAVVMVNASPAGQ--------DRSSLQD-LAAIADVVIANEHEANDWPS 208 (310)
T ss_dssp TCSEEEECS---SSCHHHHHHHHHHHHHT--TCEEEEECCSSSC--------CHHHHHH-HHHHCSEEEEEHHHHHHSSS
T ss_pred cCCEEEECC---CCCHHHHHHHHHHHHHc--CCEEEEcCCcccc--------chHHHHH-HHhhCCEEEeCHHHHHHHhC
Confidence 367776653 22245677888888876 7899999975421 1234554 88999999999999999998
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC-CCCCCccHHHHHHHHHHHc
Q 021743 166 FRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGWSN 244 (308)
Q Consensus 166 ~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~GaGD~f~a~l~~~l~ 244 (308)
. ++.|+||.|. +|++++.. ++.++++.++++ +||+||||+|+|+|+++|+
T Consensus 209 ~-------------------~~~vvvt~G~-~Ga~~~~~---------~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~ 259 (310)
T 3go6_A 209 P-------------------PTHFVITLGV-RGARYVGA---------DGVFEVPAPTVTPVDTAGAGDVFAGVLAANWP 259 (310)
T ss_dssp C-------------------CSEEEEECGG-GCEEEEET---------TEEEEECCCCCCCSCCTTHHHHHHHHHHHHCC
T ss_pred C-------------------CCEEEEEECC-CCEEEEEC---------CceEEeCCCCCCcCcCCCchHHHHHHHHHHHH
Confidence 4 6899999995 89877643 456677776666 5999999999999999999
Q ss_pred cC---CCCHHHHHHHHHHHHHHHHH
Q 021743 245 KY---RDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 245 ~~---g~~~~~A~~~A~a~~~~~i~ 266 (308)
+. |.++++|+++|+++++.+++
T Consensus 260 ~~~~~g~~l~~a~~~A~~~aa~~v~ 284 (310)
T 3go6_A 260 RNPGSPAERLRALRRACAAGALATL 284 (310)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHHTT
T ss_pred hcccCCCCHHHHHHHHHHHHHHHhC
Confidence 52 68999999999998877775
No 63
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=99.68 E-value=2.5e-15 Score=132.83 Aligned_cols=164 Identities=19% Similarity=0.151 Sum_probs=117.9
Q ss_pred cCEEEE--eccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhh
Q 021743 87 YTHLLT--GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (308)
Q Consensus 87 ~~~v~~--G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~ 164 (308)
++++.+ |.+ +.+..+.+...++.+++. +.|+|+||+.... .-...+....+.+ ..+++||||..|++.|+
T Consensus 59 a~alvIn~G~l-~~~~~~~~~~a~~~a~~~--~~PvVlDPVg~ga--s~~r~~~~~~Ll~---~~~~VItpN~~E~~~L~ 130 (273)
T 3dzv_A 59 TSALVLNLGHL-SQEREQSLLAASDYARQV--NKLTVVDLVGYGA--SDIRNEVGEKLVH---NQPTVVKGNLSEMRTFC 130 (273)
T ss_dssp CSEEEEECCSC-CHHHHHHHHHHHHHHHHT--TCCEEEECTTTTS--CHHHHHHHHHHHH---TCCSEEEEEHHHHHHHT
T ss_pred CCeEEEecCCC-ChHHHHHHHHHHHHHHHc--CCcEEEchhhcCC--cccCHHHHHHHHh---cCCcEECCCHHHHHHHh
Confidence 565555 555 456678888888888876 7899999987631 1112233333321 37899999999999999
Q ss_pred CCCCC-----C------HH---HHHHHHHHHHHcCC-CeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC-CCC
Q 021743 165 GFRIG-----S------EA---DGREACKILHAAGP-AKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYF 228 (308)
Q Consensus 165 g~~~~-----~------~~---d~~~~~~~l~~~g~-~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t 228 (308)
|.... + .+ +..+++++|.+++. ..|++|+.. +++.++ ++.+.++..... ..+
T Consensus 131 g~~~~~~GVds~~~~~~~~~~~d~~~aa~~la~~~~~~~VvlkG~~---D~i~dg---------~~~~~~~~G~~~~~~v 198 (273)
T 3dzv_A 131 QLVSHGRGVDGSPLDQSEEAIEELIQALRQQTQKFPQTVFLATGIQ---DVLVSQ---------EQVIVLQNGVPELDCF 198 (273)
T ss_dssp TCCCC-------CGGGSHHHHHHHHHHHHHHHHHSTTCEEEEESSS---EEEECS---------SCEEEECCCCGGGGSS
T ss_pred CCcccccccccccccchhhhhHHHHHHHHHHHHHhCCeEEEEECCe---eEEEcC---------CEEEEeCCCCcccCCc
Confidence 97642 1 13 66788899987665 889999863 455432 345555433222 367
Q ss_pred CCccHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 021743 229 TGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVND 271 (308)
Q Consensus 229 ~GaGD~f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~~t~~~ 271 (308)
+|+||+|+|++++++++ |.++.+|+..|..+...+-+...+.
T Consensus 199 ~GtGc~Ls~~Iaa~lA~-g~~~~~Aa~~A~~~~~~Age~A~~~ 240 (273)
T 3dzv_A 199 TGTGDLVGALVAALLGE-GNAPMTAAVAAVSYFNLCGEKAKTK 240 (273)
T ss_dssp TTHHHHHHHHHHHHHHH-TCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999 9999999999999988888877663
No 64
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=99.66 E-value=8.5e-16 Score=139.08 Aligned_cols=149 Identities=12% Similarity=0.062 Sum_probs=104.4
Q ss_pred ccCEEEEeccCCHhHHHHHHHHHHHHHhcC-C-----CceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHH
Q 021743 86 YYTHLLTGYIGSVSFLNTILQVVEKLRSIN-P-----NLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFE 159 (308)
Q Consensus 86 ~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~-~-----~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E 159 (308)
.++++.++... .+.+.++++.++++. + ++++++||.... +.++ .+++.+|+++||++|
T Consensus 146 ~~~~v~~~~~~----~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~~-----------~~~~-~~l~~~dil~~n~~e 209 (312)
T 2hlz_A 146 QFKWIHIEGRN----ASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKPR-----------EELF-QLFGYGDVVFVSKDV 209 (312)
T ss_dssp GEEEEEEECSS----HHHHHHHHHHHHHHHTTSCGGGCCEEEEEECSCC-----------GGGG-GGGGSSSEEEECHHH
T ss_pred cCCEEEEeccC----HHHHHHHHHHHHHhcccccCCCCeEEEEEcccch-----------HHHH-HHHhcCCEEEEcHHH
Confidence 36666654332 233455666665541 1 468899984210 1233 388999999999999
Q ss_pred HHHhhCCCCCCHHHHHHHHHHHHHcCC--CeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEe-cccC-CCCCCccHHH
Q 021743 160 AEQLTGFRIGSEADGREACKILHAAGP--AKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVI-PKIP-AYFTGTGDLM 235 (308)
Q Consensus 160 ~~~L~g~~~~~~~d~~~~~~~l~~~g~--~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~t~GaGD~f 235 (308)
++.| |. . +.+++++.+.+++. +.|+||.|. +|+++... + +..++++. |..+ +||+||||+|
T Consensus 210 a~~l-g~--~---~~~~~~~~l~~~~~~g~~vvvt~G~-~G~~~~~~-----~---~~~~~~~~~~~~~vvdt~GAGDaf 274 (312)
T 2hlz_A 210 AKHL-GF--Q---SAEEALRGLYGRVRKGAVLVCAWAE-EGADALGP-----D---GKLLHSDAFPPPRVVDTLGAGDTF 274 (312)
T ss_dssp HHHT-TC--C---SHHHHHHHHGGGSCTTCEEEEECGG-GCEEEECT-----T---CCEEEECCCCCSSCCCCTTHHHHH
T ss_pred HHHc-CC--C---CHHHHHHHHHHhcCCCCEEEEEecc-cCeEEEcc-----C---CCEEECCCCCCCCcccCCCchHHH
Confidence 9987 64 2 34455666665443 899999995 78876532 0 23556665 3444 5999999999
Q ss_pred HHHHHHHHccCCCCHHHHHHHHHHHHHHHHH
Q 021743 236 TALLLGWSNKYRDNLDIAAELAVSSLQALLQ 266 (308)
Q Consensus 236 ~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~ 266 (308)
+|+|+++|++ |.++++|+++|+++++.++.
T Consensus 275 ~a~~~~~l~~-g~~~~~a~~~a~~~aa~~v~ 304 (312)
T 2hlz_A 275 NASVIFSLSQ-GRSVQEALRFGCQVAGKKCG 304 (312)
T ss_dssp HHHHHHHHHT-TCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHHHHHHh
Confidence 9999999998 99999999999998887775
No 65
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=99.64 E-value=1.2e-15 Score=146.03 Aligned_cols=222 Identities=16% Similarity=0.148 Sum_probs=136.7
Q ss_pred cCCCCCCCeEEEEeccCccCccchhhcHHHHHhcCCcceeeceEE------eccCCCCCCce----eeeCCHHHHHHHHH
Q 021743 8 LALPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQ------FSNHTGYPTFK----GQVLNGQQLCDLIE 77 (308)
Q Consensus 8 ~~~~~~~~~Vl~i~~~~~~G~~G~~a~~~~l~~~Gi~~~~v~t~~------~~~~tg~~~~~----g~~~~~~~~~~~l~ 77 (308)
-+-+.++|+|+.|.|+..+.|++..++...++ .|.....+-+-. .+..++.-... ...++.++++++.+
T Consensus 238 ~~hKg~~G~vlvigGs~~~~GA~~Laa~aAlr-~GaGlv~~~~~~~~~~~~~~~~PE~m~~~~~~~~~~~~~~~~~~~~~ 316 (502)
T 3rss_A 238 DSHKGTYGKVLIIAGSRLYSGAPVLSGMGSLK-VGTGLVKLAVPFPQNLIATSRFPELISVPIDTEKGFFSLQNLQECLE 316 (502)
T ss_dssp SCCGGGGCEEEEECCCSSCCSHHHHHHHHHHH-TTCSEEEEEEETTTHHHHHHHCTTSEEEEECCSSSSCCGGGHHHHHH
T ss_pred CCCCCCCceEEEEECCCCCCCHHHHHHHHHHH-hCcCeEEEEEcHHHHHHHhhcCCeEEEecccccccccchhhHHHHHH
Confidence 35577889999999999999999887665565 444333322110 01111110000 01133345666655
Q ss_pred HHHhCCCcccCEEEEec-cCCHh-HHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcC
Q 021743 78 GLEANNLLYYTHLLTGY-IGSVS-FLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTP 155 (308)
Q Consensus 78 ~l~~~~~~~~~~v~~G~-l~~~~-~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitp 155 (308)
.+. ++|++.+|+ ++... ..+.+.+++ ++. +.|+|+||.... +..+ +.++ ..+.+++|||
T Consensus 317 ~~~-----~~davviGpGlg~~~~~~~~~~~~l---~~~--~~pvVlDadgl~----~l~~---~ll~--~~~~~~vlTP 377 (502)
T 3rss_A 317 LSK-----DVDVVAIGPGLGNNEHVREFVNEFL---KTL--EKPAVIDADAIN----VLDT---SVLK--ERKSPAVLTP 377 (502)
T ss_dssp HHT-----TCSEEEECTTCCCSHHHHHHHHHHH---HHC--CSCEEECHHHHH----TCCH---HHHH--HCSSCEEECC
T ss_pred Hhc-----cCCEEEEeCCCCCCHHHHHHHHHHH---Hhc--CCCEEEeCcccc----hhcH---HHHh--ccCCCEEEeC
Confidence 554 489999987 55443 333333333 333 679999995321 1221 1222 2457899999
Q ss_pred CHHHHHHhhCCCCCCH-HHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC-CCCCCccH
Q 021743 156 NQFEAEQLTGFRIGSE-ADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGD 233 (308)
Q Consensus 156 N~~E~~~L~g~~~~~~-~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~GaGD 233 (308)
|..|+++|+|.++.+. ++ .++++++.+++...|++|+. +.++.+. +..+ +.....+ .+++|+||
T Consensus 378 N~~E~~~L~g~~~~~~~~d-~~aa~~la~~~~~~VvlKG~---~~vi~~~---------~~~~-~~~~g~~~~at~GsGD 443 (502)
T 3rss_A 378 HPGEMARLVKKTVGDVKYN-YELAEEFAKENDCVLVLKSA---TTIVTDG---------EKTL-FNITGNTGLSKGGSGD 443 (502)
T ss_dssp CHHHHHHHHTCCHHHHTTC-HHHHHHHHHHHTSEEEECSS---SEEEECS---------SCEE-EECCCCGGGSSTTHHH
T ss_pred CHHHHHHHhCCCccchHHH-HHHHHHHHHHcCCEEEEeCC---CeEEEcC---------CEEE-EECCCCCccccCCchH
Confidence 9999999999865322 34 67778887654446777764 3455432 3333 3333344 47899999
Q ss_pred HHHHHHHHHHccCCCCHHHHHHHHHHHHHHHH
Q 021743 234 LMTALLLGWSNKYRDNLDIAAELAVSSLQALL 265 (308)
Q Consensus 234 ~f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i 265 (308)
+|+|.+++++++ |.++.+|++.|+ +.+...
T Consensus 444 ~Lag~iaa~lA~-g~~~~~Aa~~A~-~~hg~A 473 (502)
T 3rss_A 444 VLTGMIAGFIAQ-GLSPLEASTVSV-YLHGFA 473 (502)
T ss_dssp HHHHHHHHHHHT-TCCHHHHHHHHH-HHHHHH
T ss_pred HHHHHHHHHHhC-CCCHHHHHHHHH-HHHHHH
Confidence 999999999998 999999999885 444443
No 66
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=99.64 E-value=1e-15 Score=135.95 Aligned_cols=223 Identities=15% Similarity=0.034 Sum_probs=132.8
Q ss_pred cCCCCCCCeEEEEeccCccCccchhhcHHHHHh-cCCcceeeceEEe-ccCCCCCCceeeeCCHHHHHHHHHHHHhCCCc
Q 021743 8 LALPSETGRVLSIQSHTVQGYVGNKSAVFPLQL-LGYDVDPIHSVQF-SNHTGYPTFKGQVLNGQQLCDLIEGLEANNLL 85 (308)
Q Consensus 8 ~~~~~~~~~Vl~i~~~~~~G~~G~~a~~~~l~~-~Gi~~~~v~t~~~-~~~tg~~~~~g~~~~~~~~~~~l~~l~~~~~~ 85 (308)
-+-+.++|+|+.|.|+..+.|+...+....++. .|.-+.+++.... .-....+.... .+...+.. ... ....
T Consensus 24 ~~hKg~~G~vlvigGs~~~~GA~~laa~aAlr~GaGlv~~~~~~~~~~~~~~~~Pe~m~--~~~~~~~~---~~~-~~l~ 97 (279)
T 3rpz_A 24 ESHKGTYGTALLLAGSDDMPGAALLAGLGAMRSGLGKLVIGTSENVIPLIVPVLPEATY--WRDGWKKA---ADA-QLEE 97 (279)
T ss_dssp SCCGGGGCEEEEECCBTTBCHHHHHHHHHHHTTTCSEEEEEECTTTHHHHTTTCTTCEE--EETHHHHT---TTS-CCSS
T ss_pred cCCCcCCCEEEEEeCCCCCCcHHHHHHHHHHHhCCCeEEEEecHHHHHHHHhcCCeeEE--ccccccch---hhH-hhcc
Confidence 345678899999999999998887765444542 4432222221100 00111111111 11111110 001 1112
Q ss_pred ccCEEEEec-cCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhh
Q 021743 86 YYTHLLTGY-IGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (308)
Q Consensus 86 ~~~~v~~G~-l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~ 164 (308)
++|++.+|. ++..+. ..++++.+.+. +.++|+|+. +..+ + .+. ....+++||||..|+++|+
T Consensus 98 ~~davviGPGlg~~~~---~~~~~~~~l~~--~~p~VlDAd----al~~---~---~l~--~~~~~~vlTPN~~E~~~L~ 160 (279)
T 3rpz_A 98 TYRAIAIGPGLPQTES---VQQAVDHVLTA--DCPVILDAG----ALAK---R---TYP--KREGPVILTPHPGEFFRMT 160 (279)
T ss_dssp CCSEEEECTTCCCCHH---HHHHHHHHTTS--SSCEEECGG----GCCS---C---CCC--CCSSCEEECCCHHHHHHHH
T ss_pred CCCEEEECCCCCCCHH---HHHHHHHHHhh--CCCEEEECC----ccch---h---hhh--hccCCEEEecCHHHHHHHh
Confidence 489999997 554332 23445555544 568999983 2111 0 000 1356799999999999999
Q ss_pred CCCCCCH-HHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC-CCCCCccHHHHHHHHHH
Q 021743 165 GFRIGSE-ADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGW 242 (308)
Q Consensus 165 g~~~~~~-~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~GaGD~f~a~l~~~ 242 (308)
|.++.+. ++..+++++|.+++...|++|++ +.++.+. ++.+++..+..+ ..++|+||+|++.++++
T Consensus 161 g~~~~~~~~d~~~aa~~la~~~~~~VvlKG~---~~vi~~~---------~g~~~~~~~g~~~~at~GtGD~Lag~iaa~ 228 (279)
T 3rpz_A 161 GVPVNELQKKRAEYAKEWAAQLQTVIVLKGN---QTVIAFP---------DGDCWLNPTGNGALAKGGTGDTLTGMILGM 228 (279)
T ss_dssp CCCHHHHTTSHHHHHHHHHHHHTSEEEECST---TCEEECT---------TSCEEECCCCCGGGCSTTHHHHHHHHHHHH
T ss_pred CCCccchHHHHHHHHHHHHHHcCeEEEEeCC---CcEEECC---------CceEEEeCCCCCCCCCCChHHHHHHHHHHH
Confidence 9865332 35667788887654457788875 3565532 323344444444 37899999999999999
Q ss_pred HccCCCCHHHHHHHHHHHHHHHHHH
Q 021743 243 SNKYRDNLDIAAELAVSSLQALLQR 267 (308)
Q Consensus 243 l~~~g~~~~~A~~~A~a~~~~~i~~ 267 (308)
+++ |.++.+|++.|+ +.+.....
T Consensus 229 lA~-g~~~~~A~~~a~-~lh~~Ag~ 251 (279)
T 3rpz_A 229 LCC-HEDPKHAVLNAV-YLHGACAE 251 (279)
T ss_dssp HHH-CSSHHHHHHHHH-HHHHHHHH
T ss_pred HHC-CCCHHHHHHHHH-HHHHHHHH
Confidence 999 999999999984 55554443
No 67
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=99.59 E-value=9.6e-16 Score=138.45 Aligned_cols=140 Identities=12% Similarity=0.101 Sum_probs=100.7
Q ss_pred ccCEEEEeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhhC
Q 021743 86 YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (308)
Q Consensus 86 ~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g 165 (308)
.++++.++... .+.++++.++ . ++++||+.+ ++. ...+.+++ +++.+|+++||..|++.|+|
T Consensus 140 ~~~~v~~~~~~------~~~~~~~~a~----~-~v~~D~~~~----~~~--~~~~~~~~-~l~~~dil~~N~~E~~~l~g 201 (306)
T 3bf5_A 140 EYEYVHFSTGP------NYLDMAKSIR----S-KIIFDPSQE----IHK--YSKDELKK-FHEISYMSIFNDHEYRVFRE 201 (306)
T ss_dssp CEEEEEECSSS------SHHHHHHHCC----S-EEEECCGGG----GGG--SCHHHHHH-HHHHCSEEEEEHHHHHHHHH
T ss_pred CCCEEEECChH------HHHHHHHHhC----C-cEEEcCchh----hhh--ccHHHHHH-HHhcCCEEEcCHHHHHHHhC
Confidence 36777665422 3445555543 3 899999743 221 01234444 78999999999999999987
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccCCCCCCccHHHHHHHHHHHcc
Q 021743 166 FRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNK 245 (308)
Q Consensus 166 ~~~~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~GaGD~f~a~l~~~l~~ 245 (308)
....+. . ++ .|+||.|. +|+++... ++.++++.+++++||+||||+|+|+|+++|++
T Consensus 202 ~~~~~~-----~--~l------~vvvT~G~-~Ga~~~~~---------~~~~~~~~~~v~vDttGAGDaF~ag~~~~l~~ 258 (306)
T 3bf5_A 202 MTGLSS-----P--KV------TTIVTNGE-RGSSLFMD---------GKKYDFPAIPSSGDTVGAGDSFRAGLYLALYN 258 (306)
T ss_dssp HHCCSS-----C--SS------CEEEEEGG-GEEEEEET---------TEEEEEECCCCCSCCTTHHHHHHHHHHHHHHT
T ss_pred CCCcCc-----c--cE------EEEEeecc-cCeEEEeC---------CcEEEecCCcCCCCCCCccHHHHHHHHHHHHc
Confidence 532111 0 11 19999995 78877643 45566766655589999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH
Q 021743 246 YRDNLDIAAELAVSSLQALLQR 267 (308)
Q Consensus 246 ~g~~~~~A~~~A~a~~~~~i~~ 267 (308)
|.++++|+++|+++++.+++.
T Consensus 259 -g~~~~~a~~~A~~~aa~~v~~ 279 (306)
T 3bf5_A 259 -RRSIEKGMIYGTIIAHHVIDD 279 (306)
T ss_dssp -TCCHHHHHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHHHHhcc
Confidence 999999999999999888875
No 68
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=99.39 E-value=5.4e-12 Score=110.66 Aligned_cols=162 Identities=15% Similarity=0.092 Sum_probs=107.8
Q ss_pred cCEEEEec-cCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhhC
Q 021743 87 YTHLLTGY-IGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (308)
Q Consensus 87 ~~~v~~G~-l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g 165 (308)
++++.++. ..++...+.+....+.+++. +.|+|+||+.... .. ...+ ..++.+-.++++|+||..|+..|.|
T Consensus 57 a~al~iNiGtl~~~~~~~m~~A~~~A~~~--~~PvVLDPVg~ga-s~-~R~~---~~~~ll~~~~~vIrgN~sEi~~L~g 129 (265)
T 3hpd_A 57 ADAVVINIGTLDSGWRRSMVKATEIANEL--GKPIVLDPVGAGA-TK-FRTR---VSLEILSRGVDVLKGNFGEISALLG 129 (265)
T ss_dssp CSEEEEECTTCCHHHHHHHHHHHHHHHHH--TCCEEEECTTBTT-BH-HHHH---HHHHHHHHCCSEEEEEHHHHHHHHH
T ss_pred CCeEEEECCCCChHHHHHHHHHHHHHHHc--CCCEEEcCCCCCC-cH-HHHH---HHHHHHhcCCcEEcCCHHHHHHHhc
Confidence 55555543 23566788888888888887 8899999986521 01 1112 2222223478999999999999987
Q ss_pred CCC---------CCHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC--CCCCCccHH
Q 021743 166 FRI---------GSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP--AYFTGTGDL 234 (308)
Q Consensus 166 ~~~---------~~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~t~GaGD~ 234 (308)
... .+.++..++++.+.++....|++|+.. +++.++ ++.+.+.. ..+ ...+|+||+
T Consensus 130 ~~~~~~gvds~~~~~~d~~~~a~~lA~~~~~vVvlkG~~---d~I~dg---------~~~~~~~~-G~~~m~~vtGtGc~ 196 (265)
T 3hpd_A 130 EEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVTGAV---DYVSDG---------RRTFAVYN-GHELLGRVTGTGCM 196 (265)
T ss_dssp HHC----------CHHHHHHHHHHHHHHTTSEEEEESSS---EEEECS---------SCEEEECC-CCGGGGGSTTHHHH
T ss_pred ccCCCCCccCccccHHHHHHHHHHHHHHhCCEEEEeCCC---eEEEcC---------CEEEEECC-CChHhhcCCccchH
Confidence 432 235678888999987655688888753 566533 44554432 222 245899999
Q ss_pred HHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 021743 235 MTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVN 270 (308)
Q Consensus 235 f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~~t~~ 270 (308)
+++.+++++++ + +..+|...|+.+-..+-+...+
T Consensus 197 Lsg~iaa~lA~-~-~~~~Aa~~a~~~~g~Age~Aa~ 230 (265)
T 3hpd_A 197 VAALTGAFVAV-T-EPLKATTSALVTFGIAAEKAYE 230 (265)
T ss_dssp HHHHHHHHHTT-S-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhc-C-ChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998 7 5567777776665555555544
No 69
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=99.37 E-value=1.1e-11 Score=119.52 Aligned_cols=169 Identities=16% Similarity=0.069 Sum_probs=112.6
Q ss_pred cCEEEE--eccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcc--cceEEcCCHHHHHH
Q 021743 87 YTHLLT--GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP--VASMLTPNQFEAEQ 162 (308)
Q Consensus 87 ~~~v~~--G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~--~~diitpN~~E~~~ 162 (308)
++++++ |++.+ .+.+...++.+++. +.|+|+||++... .....+..+ .|++ .+++||||..|++.
T Consensus 307 ~~alvin~G~l~~---~~~~~~a~~~a~~~--~~PvVlDPVg~~a-----~~~r~~~~~-~Ll~~~~~~vItpN~~E~~~ 375 (540)
T 3nl6_A 307 HATLLLNTGSVAP---PEMLKAAIRAYNDV--KRPIVFDPVGYSA-----TETRLLLNN-KLLTFGQFSCIKGNSSEILG 375 (540)
T ss_dssp TCEEEEESSCSCC---HHHHHHHHHHHHTT--TCCEEEECTTCTT-----SHHHHHHHH-HHTTSCCCSEEEECHHHHHH
T ss_pred CCeEEEeCCCCCH---HHHHHHHHHHHHHc--CCCEEEChHHhhc-----ccccHHHHH-HHHhhCCCeEECCCHHHHHH
Confidence 566555 55554 67777888888776 7899999987521 111122233 3666 78999999999999
Q ss_pred hhCCCC------C-----CHHHHHHHHHHHHHcCCCeEEEeeeecCCcEEEEeeec---------cCCCCC-CcEEEEEe
Q 021743 163 LTGFRI------G-----SEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQ---------KEKGQS-PEQFKIVI 221 (308)
Q Consensus 163 L~g~~~------~-----~~~d~~~~~~~l~~~g~~~Vvit~g~~~g~~~~~~~~~---------~~~~~~-~~~~~~~~ 221 (308)
|+|... + +.++..++++++.++....|++|+.. +++.++... ...+.. ...+.++.
T Consensus 376 L~g~~~~~~~GVds~~~~~~~d~~~aA~~lA~~~~~vVvlkG~~---D~I~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (540)
T 3nl6_A 376 LAELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCTGEF---DFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEA 452 (540)
T ss_dssp HTTC--------------CCHHHHHHHHHHHHHTTSEEEECSSS---EEEEECCGGGBCCSSSCCSSCCTTSSCEEEEEC
T ss_pred HhCCCcccccccccccccCHHHHHHHHHHHHHHhCCEEEEcCCC---eEEECCCccccccccccccccccCCccEEEECC
Confidence 999653 1 12677788899987666789999853 566544000 000000 23555543
Q ss_pred cccC--CCCCCccHHHHHHHHHHHccCCC---CHHHHHHHHHHHHHHHHHHHHH
Q 021743 222 PKIP--AYFTGTGDLMTALLLGWSNKYRD---NLDIAAELAVSSLQALLQRTVN 270 (308)
Q Consensus 222 ~~~~--~~t~GaGD~f~a~l~~~l~~~g~---~~~~A~~~A~a~~~~~i~~t~~ 270 (308)
..++ ..++|+||++++.+++++++ +. ++.+|+..|+.+-..+-+...+
T Consensus 453 G~~~~m~~vtGtGc~Lsg~Iaa~la~-~~~~~~~~~Aa~~a~~~~~~Ag~~A~~ 505 (540)
T 3nl6_A 453 GPIEIMGDITASGCSLGSTIACMIGG-QPSEGNLFHAVVAGVMLYKAAGKIASE 505 (540)
T ss_dssp SCCGGGGSSTTHHHHHHHHHHHHHHT-CCTTCBHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhhccCccCchHHHHHHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 3313 35799999999999999998 87 6899988887776666666554
No 70
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=99.30 E-value=1.1e-11 Score=117.49 Aligned_cols=205 Identities=18% Similarity=0.134 Sum_probs=122.6
Q ss_pred CCCCCCCeEEEEeccCccCccchhhcHHHHHh-cCCcceeeceEEeccCCCCCCceeeeCCHHHHHHHHHHHHhCCCccc
Q 021743 9 ALPSETGRVLSIQSHTVQGYVGNKSAVFPLQL-LGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYY 87 (308)
Q Consensus 9 ~~~~~~~~Vl~i~~~~~~G~~G~~a~~~~l~~-~Gi~~~~v~t~~~~~~tg~~~~~g~~~~~~~~~~~l~~l~~~~~~~~ 87 (308)
+-+.++|+|+.|.|+ +.++...+....++. .|.-+...+.... ....+... ....+ . +. .++
T Consensus 231 ~hKg~~G~vlvigGs--~~GA~~laa~aAlr~GaGlv~~~~~~~~~-~~~~~~pe-~m~~~--~-------~~----~~~ 293 (475)
T 3k5w_A 231 AHKGDYGHAHVLLGK--HSGAGLLSALSALSFGSGVVSVQALECEI-TSNNKPLE-LVFCE--N-------FP----NLL 293 (475)
T ss_dssp CCGGGGCEEEEEECS--SHHHHHHHHHHHHHTTCSEEEEEESSSCC-SSSSSCTT-SEEES--S-------CC----SSC
T ss_pred CCCCCCCeEEEEeCC--CCcHHHHHHHHHHHhCCCeEEEeccHHHh-hcccCChh-heeeh--h-------hc----cCC
Confidence 445678899999999 777777665444543 4543332221100 00111100 00000 0 10 148
Q ss_pred CEEEEec-cCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhhCC
Q 021743 88 THLLTGY-IGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGF 166 (308)
Q Consensus 88 ~~v~~G~-l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~ 166 (308)
+++.+|+ ++..+. + +.++++ . + |+|+|.- + ++. .+ +. .+++...|||||..|+++|+|.
T Consensus 294 ~a~~iGPGlG~~~~-~-l~~~l~----~--~-p~VlDAD----a-L~~-~~----~~-~~~~~~~VlTPh~~E~~rL~g~ 353 (475)
T 3k5w_A 294 SAFALGMGLENIPK-D-FNRWLE----L--A-PCVLDAG----V-FYH-KE----IL-QALEKEAVLTPHPKEFLSLLNL 353 (475)
T ss_dssp SEEEECTTCSSCCT-T-HHHHHH----H--S-CEEEEGG----G-GGS-GG----GG-TTTTSSEEEECCHHHHHHHHHH
T ss_pred CEEEEcCCCCCCHH-H-HHHHHh----c--C-CEEEECc----c-cCC-ch----hh-hccCCCEEECCCHHHHHHHhCC
Confidence 9999998 554332 3 444443 2 5 8999982 1 211 11 11 2456679999999999999986
Q ss_pred -----CCCC-HHHHHHHHHHHHHcC-CCeEEEeeeecCCcEEEEeeeccCCCCCCcEEEEEecccC-CCCCCccHHHHHH
Q 021743 167 -----RIGS-EADGREACKILHAAG-PAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTAL 238 (308)
Q Consensus 167 -----~~~~-~~d~~~~~~~l~~~g-~~~Vvit~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~GaGD~f~a~ 238 (308)
+..+ .++..++++++.++. ...|++|++. .++... +..+ +.....+ ..++|+||++++.
T Consensus 354 ~~~~v~~~~~~~d~~~aa~~la~~~g~~~VvlKG~~---~vI~~~---------~~~~-~~~~g~~~mat~GtGdvLsg~ 420 (475)
T 3k5w_A 354 VGINISMLELLDNKLEIARDFSQKYPKVVLLLKGAN---TLIAHQ---------GQVF-INILGSVALAKAGSGDVLAGL 420 (475)
T ss_dssp TSCCCCTTSGGGSCC--CHHHHHHCTTEEEEECSSS---EEEEET---------TEEE-EECCCCGGGCSTTHHHHHHHH
T ss_pred ccCCCCcchhHHHHHHHHHHHHHHcCCeEEEEeCCC---CEEECC---------CEEE-EECCCCCCCCCCCHHHHHHHH
Confidence 4433 245567788888765 6788999864 455432 3333 3333333 3689999999999
Q ss_pred HHHHHccCCCCHHHHHHHHHHHHHHHH
Q 021743 239 LLGWSNKYRDNLDIAAELAVSSLQALL 265 (308)
Q Consensus 239 l~~~l~~~g~~~~~A~~~A~a~~~~~i 265 (308)
++++|++ |.++.+|+..| .+.+...
T Consensus 421 Iaa~lA~-g~~~~~Aa~~a-~~lhg~a 445 (475)
T 3k5w_A 421 ILSLLSQ-NYTPLDAAINA-SLAHALA 445 (475)
T ss_dssp HHHHHHT-TCCHHHHHHHH-HHHHHHG
T ss_pred HHHHHHc-CCCHHHHHHHH-HHHHHHH
Confidence 9999999 99999998875 5555554
No 71
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=96.34 E-value=0.062 Score=50.44 Aligned_cols=110 Identities=8% Similarity=0.120 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHhCCCcccC-EEEEec--cCC--------HhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhh
Q 021743 70 QQLCDLIEGLEANNLLYYT-HLLTGY--IGS--------VSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSEL 138 (308)
Q Consensus 70 ~~~~~~l~~l~~~~~~~~~-~v~~G~--l~~--------~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~ 138 (308)
+.+.+.++.+.+ .+| +|++|+ +.. +...+.+.+.++.++. +++++-+--. .+.+++.
T Consensus 224 e~f~~~l~e~~~----~~d~~vLSGlq~m~~~y~dg~~~~~~l~~~~e~i~~l~~--~~~~iH~E~A------s~~~~~l 291 (474)
T 3drw_A 224 EDIKPFLGEIGK----EVDGAIFSGYQGLRTKYSDGKDANYYLRRAKEDIIEFKE--KDVKIHVEFA------SVQDRKL 291 (474)
T ss_dssp TTTGGGHHHHHH----HCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHH--TTCEEEEECC------CCSCHHH
T ss_pred HHHHHHHHHhhc----CCCEEEEeccccccccccccccHHHHHHHHHHHHHHhcC--CCCeEEEEeC------ccccHHH
Confidence 455556666542 267 566776 333 2333444566666653 4788776542 3456777
Q ss_pred HHHHHHhhcccceEEcCCHHHHHHhhCC-----------CCCCHHHHHHHHHHHH-HcCCCeEEE
Q 021743 139 VSVYREKVVPVASMLTPNQFEAEQLTGF-----------RIGSEADGREACKILH-AAGPAKVVI 191 (308)
Q Consensus 139 ~~~l~~~ll~~~diitpN~~E~~~L~g~-----------~~~~~~d~~~~~~~l~-~~g~~~Vvi 191 (308)
...+.+.++|.+|.+=.|+.|+..+++. .....+++.++++.|+ +++.+.|.+
T Consensus 292 ~~~i~~~i~p~vDSlGmNEqELa~l~~~lg~~~~s~~~~~~~~i~~v~e~~~~ll~~~~l~rIhv 356 (474)
T 3drw_A 292 RKKIITNILPFVDSVGIDEAEIAQILSVLGYRELADRIFTYNRLEDSILGGMIILDELNFEILQV 356 (474)
T ss_dssp HHHHHHHTGGGSSEEEEEHHHHHHHHHHHTCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHhcccccccccCHHHHHHHHHHhcCCccchhhhcCCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 7776667999999999999999999863 1123567777788776 457766554
No 72
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=85.13 E-value=3.6 Score=38.38 Aligned_cols=109 Identities=10% Similarity=0.088 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHhCCCcccC-EEEEec--cCCH---hHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHH
Q 021743 70 QQLCDLIEGLEANNLLYYT-HLLTGY--IGSV---SFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYR 143 (308)
Q Consensus 70 ~~~~~~l~~l~~~~~~~~~-~v~~G~--l~~~---~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~ 143 (308)
+.+.+.++.+.. .+| ++++|+ +... +..+...+.++.++ ++++++-++.. .+.+.+....+.
T Consensus 213 e~f~~~l~e~~~----~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~--~~~~~iH~ElA------s~~~~~~~~~i~ 280 (455)
T 1ua4_A 213 EEFRESFSEVIK----NVQLAILSGLQALTKENYKEPFEIVKSNLEVLN--EREIPVHLEFA------FTPDEKVREEIL 280 (455)
T ss_dssp GGGSTTHHHHGG----GCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHH--HTTCCEEEECC------CCCCHHHHHHHH
T ss_pred HHHHHHHHhhcc----CCcEEEEechhcccccchHHHHHHHHHHHHHhc--CCCceEEEEeC------CccCHHHHHHHH
Confidence 345555554332 377 566676 4443 23333333333442 25788888863 345667766666
Q ss_pred HhhcccceEEcCCHHHHHHhhCC--------CC-----CCHHHHHHHHHHHH-HcCCCeEEE
Q 021743 144 EKVVPVASMLTPNQFEAEQLTGF--------RI-----GSEADGREACKILH-AAGPAKVVI 191 (308)
Q Consensus 144 ~~ll~~~diitpN~~E~~~L~g~--------~~-----~~~~d~~~~~~~l~-~~g~~~Vvi 191 (308)
.++|++|.+-.|+.|+..+.+. .+ .+..++.+++.+++ +.+...|.+
T Consensus 281 -~ilp~vDSlGmNE~EL~~l~~~lg~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~l~rihv 341 (455)
T 1ua4_A 281 -NVLGMFYSVGLNEVELASIMEILGEKKLAKELLAHDPVDPIAVTEAMLKLAKKTGVKRIHF 341 (455)
T ss_dssp -HHGGGCSEEEECHHHHHHHHHHTTCHHHHHHTTSSSSCCHHHHHHHHHHHHHHHCCSEEEE
T ss_pred -hhhccCcccccCHHHHHHHHHHhCCCccccccccCCccCHHHHHHHHHHHHHHcCCCEEEE
Confidence 5999999999999999888643 11 22677777777776 456665443
No 73
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=84.62 E-value=5.7 Score=37.12 Aligned_cols=109 Identities=12% Similarity=0.155 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHhCCCcccC-EEEEec--cCC----Hh-HHHHHHHHHHHHHh-cCCCceEEEccccccCCCcCCChhhHH
Q 021743 70 QQLCDLIEGLEANNLLYYT-HLLTGY--IGS----VS-FLNTILQVVEKLRS-INPNLIYVCDPVMGDEGKLYVPSELVS 140 (308)
Q Consensus 70 ~~~~~~l~~l~~~~~~~~~-~v~~G~--l~~----~~-~~~~~~~~l~~~k~-~~~~~~vv~Dpv~~~~g~~~~~~~~~~ 140 (308)
+.+.+.++.+.. .+| +|++|+ +.. ++ ..+.+.++.+.++. .++++++-+--. .+.+++...
T Consensus 221 e~f~~~l~e~~~----~~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~~~l~~l~~~~~~iH~E~A------s~~~~~l~~ 290 (467)
T 1gc5_A 221 REFREGFEEITR----NVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNILNRYNVKSHFEFA------YTANRRVRE 290 (467)
T ss_dssp HHHHHSHHHHHT----TCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHHTTCEEEEECC------CCCCHHHHH
T ss_pred HHHHHHHHhhcc----CCCEEEEechhcccCccCCchhHHHHHHHHHHHHHhhcCCCCeEEEEEC------CcccHHHHH
Confidence 455556555432 377 566786 433 23 34444444444444 445777776642 345677777
Q ss_pred HHHHhhcccceEEcCCHHHHHHhh---CCCC-------CCHHHHHHHHHHHH-HcCCCeE
Q 021743 141 VYREKVVPVASMLTPNQFEAEQLT---GFRI-------GSEADGREACKILH-AAGPAKV 189 (308)
Q Consensus 141 ~l~~~ll~~~diitpN~~E~~~L~---g~~~-------~~~~d~~~~~~~l~-~~g~~~V 189 (308)
.+. .++|++|.+=.|+.|+..++ |.+- .+..++.+++.+++ +.+...|
T Consensus 291 ~i~-~ilp~vDSlGmNEqELa~l~~~lg~~~l~~~i~~p~v~~v~~~~~~ll~~~~l~rI 349 (467)
T 1gc5_A 291 ALV-ELLPKFTSVGLNEVELASIMEIIGDEELAKEVLEGHIFSVIDAMNVLMDETGIERI 349 (467)
T ss_dssp HHH-HHGGGCSEEEECHHHHHHHHHHTTCHHHHHHHHTTCHHHHHHHHHHHHHHHCCSEE
T ss_pred HHH-hhccccccCccCHHHHHHHHHHcCCCcccccccCCCHHHHHHHHHHHHHhcCCCeE
Confidence 777 69999999999999998544 3220 11556666777776 4466544
No 74
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=82.02 E-value=29 Score=32.21 Aligned_cols=107 Identities=9% Similarity=0.047 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHhCCCcccC-EEEEec--cCC---HhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHH
Q 021743 70 QQLCDLIEGLEANNLLYYT-HLLTGY--IGS---VSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYR 143 (308)
Q Consensus 70 ~~~~~~l~~l~~~~~~~~~-~v~~G~--l~~---~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~ 143 (308)
+++.+.++.+.. .+| +|++|+ +.. +...+...+.++.++ ++++++-+--. .+.+++....+.
T Consensus 216 e~f~~~l~e~~~----~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~--~~~~~iH~E~A------s~~~~~l~~~i~ 283 (457)
T 1l2l_A 216 EEWIERFEEIAK----RSELAIISGLHPLTQENHGKPIKLVREHLKILN--DLGIRAHLEFA------FTPDEVVRLEIV 283 (457)
T ss_dssp HHHHHSHHHHHT----TCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHH--HTTCEEEEECC------CCSSHHHHHHHH
T ss_pred HHHHHHHHhhcc----CCCEEEEeccccccccchhhhHHHHHHHHHHhc--CCCCeEEEEEC------CcccHHHHHHHH
Confidence 455555555432 377 577787 444 222232333344442 24777776542 345677777777
Q ss_pred HhhcccceEEcCCHHHHHHh---hCC----------CCCCHHHHHHHHHHHH-HcCCCeE
Q 021743 144 EKVVPVASMLTPNQFEAEQL---TGF----------RIGSEADGREACKILH-AAGPAKV 189 (308)
Q Consensus 144 ~~ll~~~diitpN~~E~~~L---~g~----------~~~~~~d~~~~~~~l~-~~g~~~V 189 (308)
.++|++|.+=.|+.|+..| .|- +..+..++.+++.+|+ +.+...|
T Consensus 284 -~ilp~vDSlGmNEqELa~l~~~lg~~~l~~~i~~~~~~~v~~v~~~~~~ll~~~~l~rI 342 (457)
T 1l2l_A 284 -KLLKHFYSVGLNEVELASVVSVMGEKELAERIISKDPADPIAVIEGLLKLIKETGVKRI 342 (457)
T ss_dssp -HHGGGCSEEEECHHHHHHHHHHTTCHHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCSEE
T ss_pred -hhccccccCccCHHHHHHHHHHcCCcccccccccCCccCHHHHHHHHHHHHHhcCCCeE
Confidence 6999999999999999885 331 1122566777777776 4566544
No 75
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=61.27 E-value=67 Score=26.31 Aligned_cols=118 Identities=13% Similarity=0.181 Sum_probs=62.6
Q ss_pred CCCCeEEEEe-ccCccCccchhhcHHHHHhcCCcceeeceEEeccCCCCCCceeeeCCHHHHHHHHHHHHhCCCcccCEE
Q 021743 12 SETGRVLSIQ-SHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHL 90 (308)
Q Consensus 12 ~~~~~Vl~i~-~~~~~G~~G~~a~~~~l~~~Gi~~~~v~t~~~~~~tg~~~~~g~~~~~~~~~~~l~~l~~~~~~~~~~v 90 (308)
...++|+.-. ..+... .|...-...|+..|+++..+ |..++.+++-+...... +|+|
T Consensus 90 ~~~~~vll~~v~gd~Hd-iG~~iv~~~l~~~G~~Vi~L---------------G~~vp~e~iv~~~~~~~------~d~v 147 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHD-IGHRLVTTMLGANGFQIVDL---------------GVDVLNENVVEEAAKHK------GEKV 147 (215)
T ss_dssp --CCEEEEEECTTCCCC-HHHHHHHHHHHHTSCEEEEC---------------CSSCCHHHHHHHHHHTT------TSCE
T ss_pred CCCCeEEEEeCCCChhH-HHHHHHHHHHHHCCCeEEEc---------------CCCCCHHHHHHHHHHcC------CCEE
Confidence 3445655543 233322 44332222488899975432 44566666544443332 6755
Q ss_pred EE-eccCCHhHHHHHHHHHHHHHhcCC--CceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhh
Q 021743 91 LT-GYIGSVSFLNTILQVVEKLRSINP--NLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (308)
Q Consensus 91 ~~-G~l~~~~~~~~~~~~l~~~k~~~~--~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~ 164 (308)
.+ |+.........+.++++.+++..+ ++++++= | ..+.+++.+. + .+|...+|..|+-.+.
T Consensus 148 ~l~~S~l~~~~~~~~~~~i~~l~~~~~~~~v~v~vG------G-~~~~~~~a~~----i--Gad~~~~dA~~av~~a 211 (215)
T 3ezx_A 148 LLVGSALMTTSMLGQKDLMDRLNEEKLRDSVKCMFG------G-APVSDKWIEE----I--GADATAENAAEAAKVA 211 (215)
T ss_dssp EEEEECSSHHHHTHHHHHHHHHHHTTCGGGSEEEEE------S-SSCCHHHHHH----H--TCCBCCSSHHHHHHHH
T ss_pred EEEchhcccCcHHHHHHHHHHHHHcCCCCCCEEEEE------C-CCCCHHHHHH----h--CCeEEECCHHHHHHHH
Confidence 44 443445566778888899988743 4554431 2 2233443321 2 5788888887776553
No 76
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=58.77 E-value=55 Score=27.61 Aligned_cols=117 Identities=14% Similarity=0.211 Sum_probs=63.7
Q ss_pred CCCCeEEEEec-cCccCccchhhcHHHHHhcCCcceeeceEEeccCCCCCCceeeeCCHHHHHHHHHHHHhCCCcccCEE
Q 021743 12 SETGRVLSIQS-HTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHL 90 (308)
Q Consensus 12 ~~~~~Vl~i~~-~~~~G~~G~~a~~~~l~~~Gi~~~~v~t~~~~~~tg~~~~~g~~~~~~~~~~~l~~l~~~~~~~~~~v 90 (308)
...++|+.... .+..- .|...-...|+..|+++..+ |..++.+.+....+... +++|
T Consensus 121 ~~~~~vlla~~~gd~Hd-iG~~iva~~L~~~G~~Vi~L---------------G~~vp~e~l~~~~~~~~------~d~V 178 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHD-IGKNIVTALLRANGYNVVDL---------------GRDVPAEEVLAAVQKEK------PIML 178 (258)
T ss_dssp CCSCEEEEEECTTCCCC-HHHHHHHHHHHHTTCEEEEE---------------EEECCSHHHHHHHHHHC------CSEE
T ss_pred CCCCeEEEEeCCCCccH-HHHHHHHHHHHHCCCEEEEC---------------CCCCCHHHHHHHHHHcC------CCEE
Confidence 34456655543 33322 44332222378899976433 44566666655555443 7866
Q ss_pred EEeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhh
Q 021743 91 LTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (308)
Q Consensus 91 ~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~ 164 (308)
.+..+.. .....+.++++.+++..++++|++= | ..+.++. .+ -+ .+|...++..|+-.+.
T Consensus 179 ~lS~l~~-~~~~~~~~~i~~l~~~~~~~~v~vG------G-~~~~~~~----~~-~i-gad~~~~da~~av~~~ 238 (258)
T 2i2x_B 179 TGTALMT-TTMYAFKEVNDMLLENGIKIPFACG------G-GAVNQDF----VS-QF-ALGVYGEEAADAPKIA 238 (258)
T ss_dssp EEECCCT-TTTTHHHHHHHHHHTTTCCCCEEEE------S-TTCCHHH----HH-TS-TTEEECSSTTHHHHHH
T ss_pred EEEeecc-CCHHHHHHHHHHHHhcCCCCcEEEE------C-ccCCHHH----HH-Hc-CCeEEECCHHHHHHHH
Confidence 6555432 2345677888888887555555432 1 1223332 22 22 4789988887765554
No 77
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=55.00 E-value=72 Score=24.73 Aligned_cols=87 Identities=16% Similarity=0.148 Sum_probs=46.2
Q ss_pred CCCeEEEE-eccCccCccchhhcHHHHHhcCCcceeeceEEeccCCCCCCceeeeCCHHHHHHHHHHHHhCCCcccCEEE
Q 021743 13 ETGRVLSI-QSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLL 91 (308)
Q Consensus 13 ~~~~Vl~i-~~~~~~G~~G~~a~~~~l~~~Gi~~~~v~t~~~~~~tg~~~~~g~~~~~~~~~~~l~~l~~~~~~~~~~v~ 91 (308)
..++|+.. -+.+..- .|.......|+..|+++..+ |..++.+++-+.+.... +|+|.
T Consensus 17 ~~~~vlla~~~gd~Hd-iG~~~va~~l~~~G~eVi~l---------------G~~~p~e~lv~aa~~~~------~diV~ 74 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHD-RGAKVVARALRDAGFEVVYT---------------GLRQTPEQVAMAAVQED------VDVIG 74 (161)
T ss_dssp CSCEEEEEEESSSSCC-HHHHHHHHHHHHTTCEEECC---------------CSBCCHHHHHHHHHHTT------CSEEE
T ss_pred CCCEEEEEeCCCCccH-HHHHHHHHHHHHCCCEEEEC---------------CCCCCHHHHHHHHHhcC------CCEEE
Confidence 44554443 2334332 44332222378899976533 33456665544443322 77665
Q ss_pred EeccCCHhHHHHHHHHHHHHHhcCC-CceEEE
Q 021743 92 TGYIGSVSFLNTILQVVEKLRSINP-NLIYVC 122 (308)
Q Consensus 92 ~G~l~~~~~~~~~~~~l~~~k~~~~-~~~vv~ 122 (308)
+..+. ......+.++++.+++..+ +++|++
T Consensus 75 lS~~~-~~~~~~~~~~i~~L~~~g~~~i~v~v 105 (161)
T 2yxb_A 75 VSILN-GAHLHLMKRLMAKLRELGADDIPVVL 105 (161)
T ss_dssp EEESS-SCHHHHHHHHHHHHHHTTCTTSCEEE
T ss_pred EEeec-hhhHHHHHHHHHHHHhcCCCCCEEEE
Confidence 54433 2346677788888887632 455544
No 78
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=54.88 E-value=98 Score=26.23 Aligned_cols=107 Identities=13% Similarity=0.134 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHhCCCcccCEEEEeccCCHh-H-------HHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHH
Q 021743 69 GQQLCDLIEGLEANNLLYYTHLLTGYIGSVS-F-------LNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVS 140 (308)
Q Consensus 69 ~~~~~~~l~~l~~~~~~~~~~v~~G~l~~~~-~-------~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~ 140 (308)
.+...++.+.+++.+ +++|+.++.-... . .+.+..+.+.+++. |++++.+|- ++...+
T Consensus 36 ~e~a~~~a~~l~~~G---a~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~--Gl~~~te~~---------d~~~~~ 101 (262)
T 1zco_A 36 REQIMKVAEFLAEVG---IKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEY--GLVTVTEVM---------DTRHVE 101 (262)
T ss_dssp HHHHHHHHHHHHHTT---CCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECC---------CGGGHH
T ss_pred HHHHHHHHHHHHHcC---CCEEEEEecccCCCcccccCccHHHHHHHHHHHHHc--CCcEEEeeC---------CHHhHH
Confidence 466667777777654 6778777642111 0 33344444444454 899988872 223344
Q ss_pred HHHHhhcccceEEcCCHHH------HHHh--hCCCC------C-CHHHHHHHHHHHHHcCCCeEEEee
Q 021743 141 VYREKVVPVASMLTPNQFE------AEQL--TGFRI------G-SEADGREACKILHAAGPAKVVITS 193 (308)
Q Consensus 141 ~l~~~ll~~~diitpN~~E------~~~L--~g~~~------~-~~~d~~~~~~~l~~~g~~~Vvit~ 193 (308)
.+.+ + +|+++-...+ +..+ +|.++ . +.+++..++..+...|.+.+++..
T Consensus 102 ~l~~-~---vd~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~ 165 (262)
T 1zco_A 102 LVAK-Y---SDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCE 165 (262)
T ss_dssp HHHH-H---CSEEEECGGGTTCHHHHHHHTTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred HHHh-h---CCEEEECcccccCHHHHHHHHhcCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEE
Confidence 4433 3 4555433222 2222 35543 2 688999999988888887766653
No 79
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=54.43 E-value=74 Score=25.64 Aligned_cols=116 Identities=11% Similarity=0.185 Sum_probs=61.8
Q ss_pred CCCeEEEEec-cCccCccchhhcHHHHHhcCCcceeeceEEeccCCCCCCceeeeCCHHHHHHHHHHHHhCCCcccCEEE
Q 021743 13 ETGRVLSIQS-HTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLL 91 (308)
Q Consensus 13 ~~~~Vl~i~~-~~~~G~~G~~a~~~~l~~~Gi~~~~v~t~~~~~~tg~~~~~g~~~~~~~~~~~l~~l~~~~~~~~~~v~ 91 (308)
..++|+.... .+..- .|...-...|+..|+++..+ |..++.+.+...++... +++|.
T Consensus 87 ~~~~vll~~~~gd~H~-iG~~~va~~l~~~G~~v~~L---------------G~~vp~~~l~~~~~~~~------~d~v~ 144 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHD-IGKNLVAMMLESGGFTVYNL---------------GVDIEPGKFVEAVKKYQ------PDIVG 144 (210)
T ss_dssp CCCEEEEEEBTTCCCC-HHHHHHHHHHHHTTCEEEEC---------------CSSBCHHHHHHHHHHHC------CSEEE
T ss_pred CCCEEEEEeCCCcccH-HHHHHHHHHHHHCCCEEEEC---------------CCCCCHHHHHHHHHHcC------CCEEE
Confidence 3455555543 23222 34332222378889875432 23456666655554443 78766
Q ss_pred EeccCCHhHHHHHHHHHHHHHhcC--CCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcCCHHHHHHhh
Q 021743 92 TGYIGSVSFLNTILQVVEKLRSIN--PNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (308)
Q Consensus 92 ~G~l~~~~~~~~~~~~l~~~k~~~--~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~ 164 (308)
+..+. ......+.++++.+++.. ++++|++= | ..++++.. ++ -.+|...++..|+-.+.
T Consensus 145 lS~~~-~~~~~~~~~~i~~l~~~~~~~~~~v~vG------G-~~~~~~~~---~~---~gad~~~~da~~av~~~ 205 (210)
T 1y80_A 145 MSALL-TTTMMNMKSTIDALIAAGLRDRVKVIVG------G-APLSQDFA---DE---IGADGYAPDAASATELC 205 (210)
T ss_dssp EECCS-GGGTHHHHHHHHHHHHTTCGGGCEEEEE------S-TTCCHHHH---HH---HTCSEECSSHHHHHHHH
T ss_pred Eeccc-cccHHHHHHHHHHHHhcCCCCCCeEEEE------C-CCCCHHHH---HH---cCCeEEECCHHHHHHHH
Confidence 55543 234566778888888753 23565532 2 12233322 11 15788888887776543
No 80
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=50.01 E-value=1.8e+02 Score=27.82 Aligned_cols=122 Identities=9% Similarity=0.139 Sum_probs=68.0
Q ss_pred CCCeEEEEec-cCccCccchhhcHHHHHhcCCcceeeceEEeccCCCCCCceeeeCCHHHHHHHHHHHHhCCCcccCEEE
Q 021743 13 ETGRVLSIQS-HTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLL 91 (308)
Q Consensus 13 ~~~~Vl~i~~-~~~~G~~G~~a~~~~l~~~Gi~~~~v~t~~~~~~tg~~~~~g~~~~~~~~~~~l~~l~~~~~~~~~~v~ 91 (308)
..++|+...- .+..- .|...-...|+..|+++..+ |..++.+.+-...+... +++|.
T Consensus 97 ~~~kVLlatv~GD~Hd-iG~~iva~~L~~~G~eVi~L---------------G~~vP~e~iv~aa~~~~------~diVg 154 (579)
T 3bul_A 97 TNGKMVIATVKGDVHD-IGKNIVGVVLQCNNYEIVDL---------------GVMVPAEKILRTAKEVN------ADLIG 154 (579)
T ss_dssp CSCEEEEEEBTTCCCC-HHHHHHHHHHHTTTCEEEEC---------------CSSBCHHHHHHHHHHHT------CSEEE
T ss_pred CCCeEEEEECCCCCch-HHHHHHHHHHHHCCCEEEEC---------------CCCCCHHHHHHHHHHcC------CCEEE
Confidence 3556555432 33332 44332222478899875432 34566666655555443 77666
Q ss_pred EeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHH-HHHHhhcccceEEcCCHHHHHHhhC
Q 021743 92 TGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVS-VYREKVVPVASMLTPNQFEAEQLTG 165 (308)
Q Consensus 92 ~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~-~l~~~ll~~~diitpN~~E~~~L~g 165 (308)
+..+.. .....+.++++.+++..++++|++= | ..+.++... .+.. .+..+|+..++..|+-.+..
T Consensus 155 LS~l~t-~~~~~m~~~i~~Lr~~g~~i~ViVG------G-a~~~~~~a~~~i~p-~~~GAD~ya~DA~~Av~~a~ 220 (579)
T 3bul_A 155 LSGLIT-PSLDEMVNVAKEMERQGFTIPLLIG------G-ATTSKAHTAVKIEQ-NYSGPTVYVQNASRTVGVVA 220 (579)
T ss_dssp EECCST-HHHHHHHHHHHHHHHTTCCSCEEEE------S-TTCCHHHHHHHTGG-GCSSCEEECCSHHHHHHHHH
T ss_pred EEecCC-CCHHHHHHHHHHHHHcCCCCeEEEE------c-cccchhhhhhhhhh-cccCCeEEECCHHHHHHHHH
Confidence 554443 3466778888888887555555432 1 223333321 2222 34478999999988776654
No 81
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=49.99 E-value=95 Score=28.05 Aligned_cols=78 Identities=14% Similarity=0.178 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcC------CHHHHHHh--hCCCC-----
Q 021743 102 NTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTP------NQFEAEQL--TGFRI----- 168 (308)
Q Consensus 102 ~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitp------N~~E~~~L--~g~~~----- 168 (308)
+.+..+.+.+++. |++++..| ++.+.++.+.+ + .+++++- |..=++.+ +|.++
T Consensus 101 e~~~~L~~~~~~~--Gi~~~stp---------fD~~svd~l~~-~--~vd~~KIgS~~~~N~pLL~~va~~gKPViLStG 166 (385)
T 1vli_A 101 EWILPLLDYCREK--QVIFLSTV---------CDEGSADLLQS-T--SPSAFKIASYEINHLPLLKYVARLNRPMIFSTA 166 (385)
T ss_dssp GGHHHHHHHHHHT--TCEEECBC---------CSHHHHHHHHT-T--CCSCEEECGGGTTCHHHHHHHHTTCSCEEEECT
T ss_pred HHHHHHHHHHHHc--CCcEEEcc---------CCHHHHHHHHh-c--CCCEEEECcccccCHHHHHHHHhcCCeEEEECC
Confidence 3445555566665 88887776 34455554433 2 1444433 22223333 35543
Q ss_pred -CCHHHHHHHHHHHHHcCCCeEEEee
Q 021743 169 -GSEADGREACKILHAAGPAKVVITS 193 (308)
Q Consensus 169 -~~~~d~~~~~~~l~~~g~~~Vvit~ 193 (308)
.+.+++..+++.+.+.|.+.|++.-
T Consensus 167 maTl~Ei~~Ave~i~~~Gn~~iiLlh 192 (385)
T 1vli_A 167 GAEISDVHEAWRTIRAEGNNQIAIMH 192 (385)
T ss_dssp TCCHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred CCCHHHHHHHHHHHHHCCCCcEEEEe
Confidence 4789999999999888886666643
No 82
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=44.12 E-value=1.6e+02 Score=26.44 Aligned_cols=108 Identities=11% Similarity=0.092 Sum_probs=62.5
Q ss_pred CHHHHHHHHHHHHhCCCcccCEEEEeccCC--------HhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhH
Q 021743 68 NGQQLCDLIEGLEANNLLYYTHLLTGYIGS--------VSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELV 139 (308)
Q Consensus 68 ~~~~~~~~l~~l~~~~~~~~~~v~~G~l~~--------~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~ 139 (308)
+.+...++.+.+++.+ +++|+.|..-. +...+.+..+.+.+++. |++++.||- +++.+
T Consensus 154 s~e~a~~~a~~~k~aG---a~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~--Gl~~~te~~---------d~~~~ 219 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKG---LKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEY--GLGVISEIV---------TPADI 219 (385)
T ss_dssp CHHHHHHHHHHHHHTT---CCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECC---------SGGGH
T ss_pred CHHHHHHHHHHHHHcC---CCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHc--CCEEEEecC---------CHHHH
Confidence 4456667777777644 67777775210 11134444444445555 899998882 23333
Q ss_pred HHHHHhhcccceEEcCCHHH------HHHh--hCCCC-------CCHHHHHHHHHHHHHcCCCeEEEee
Q 021743 140 SVYREKVVPVASMLTPNQFE------AEQL--TGFRI-------GSEADGREACKILHAAGPAKVVITS 193 (308)
Q Consensus 140 ~~l~~~ll~~~diitpN~~E------~~~L--~g~~~-------~~~~d~~~~~~~l~~~g~~~Vvit~ 193 (308)
+.+ ...+|+++-...+ +..+ +|.++ .+.+++..+++.+.+.|.+.|++.-
T Consensus 220 ~~l----~~~vd~lkIgs~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~ 284 (385)
T 3nvt_A 220 EVA----LDYVDVIQIGARNMQNFELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCE 284 (385)
T ss_dssp HHH----TTTCSEEEECGGGTTCHHHHHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred HHH----HhhCCEEEECcccccCHHHHHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEE
Confidence 433 2346666543322 2222 34442 4688999999999888887776653
No 83
>3rzi_A Probable 3-deoxy-D-arabino-heptulosonate 7-phosph synthase AROG; DAH7P synthase, shikimate pathway, aromatic biosynthesis; HET: PHE TRP; 1.95A {Mycobacterium tuberculosis} SCOP: c.1.10.8 PDB: 3kgf_A* 2b7o_A* 3nud_A* 3nue_A* 3nv8_A* 3pfp_A* 2w19_A 2w1a_A*
Probab=43.09 E-value=62 Score=29.78 Aligned_cols=63 Identities=22% Similarity=0.417 Sum_probs=43.6
Q ss_pred eeeCCHHHHHHHHHHHHhCCCcccCEEEEeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccc
Q 021743 64 GQVLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG 127 (308)
Q Consensus 64 g~~~~~~~~~~~l~~l~~~~~~~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~ 127 (308)
|+..+++++-++++.+...+. .-...+|--++.....+.+-.+++..++....+.++|||--+
T Consensus 308 GP~~~p~elv~L~~~LnP~~e-pGRlTLI~RmGa~kv~~~LP~li~aV~~~G~~VvW~cDPMHG 370 (462)
T 3rzi_A 308 GPNMTPELAVEYVERLDPHNK-PGRLTLVSRMGNHKVRDLLPPIVEKVQATGHQVIWQCDPMHG 370 (462)
T ss_dssp CTTCCHHHHHHHHHHHCTTCC-TTSEEEEECCCTTTHHHHHHHHHHHHHHTSCCCEEEECCSTT
T ss_pred CCCCCHHHHHHHHHHhCCCCC-CCeEEEEEccCCchhhhhHHHHHHHHHHCCCCeEEEeCCCCC
Confidence 567778888888888876543 233555555565666777778888888764456677999533
No 84
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=43.09 E-value=1.8e+02 Score=25.84 Aligned_cols=107 Identities=10% Similarity=0.026 Sum_probs=59.6
Q ss_pred CHHHHHHHHHHHHhCCCcccCEEEEeccCCHh--------HHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhH
Q 021743 68 NGQQLCDLIEGLEANNLLYYTHLLTGYIGSVS--------FLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELV 139 (308)
Q Consensus 68 ~~~~~~~~l~~l~~~~~~~~~~v~~G~l~~~~--------~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~ 139 (308)
+.++..++.+.+++.. .++++.+..-... ..+.+..+.+.+++. |++++.+| .+++..
T Consensus 118 s~e~a~~~a~~~k~aG---a~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~--Gl~~~te~---------~d~~~~ 183 (350)
T 1vr6_A 118 GREMLMETAHFLSELG---VKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKY--GMYVVTEA---------LGEDDL 183 (350)
T ss_dssp CHHHHHHHHHHHHHTT---CCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEEC---------SSGGGH
T ss_pred CHHHHHHHHHHHHHcC---CCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHc--CCcEEEEe---------CCHHHH
Confidence 3456666777776643 5666655332111 123344444444454 88998887 223444
Q ss_pred HHHHHhhcccceEEcC------CHHHHHHh--hCCCC------C-CHHHHHHHHHHHHHcCCCeEEEe
Q 021743 140 SVYREKVVPVASMLTP------NQFEAEQL--TGFRI------G-SEADGREACKILHAAGPAKVVIT 192 (308)
Q Consensus 140 ~~l~~~ll~~~diitp------N~~E~~~L--~g~~~------~-~~~d~~~~~~~l~~~g~~~Vvit 192 (308)
+.+.+ + +|+++- |..=+..+ +|.++ . +.+++..+++.+...|.+.++++
T Consensus 184 ~~l~~-~---vd~lkIgAr~~~n~~LL~~va~~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLc 247 (350)
T 1vr6_A 184 PKVAE-Y---ADIIQIGARNAQNFRLLSKAGSYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILC 247 (350)
T ss_dssp HHHHH-H---CSEEEECGGGTTCHHHHHHHHTTCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEE
T ss_pred HHHHH-h---CCEEEECcccccCHHHHHHHHccCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEE
Confidence 44443 3 444432 33323333 34443 2 67899999999988888777775
No 85
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=39.63 E-value=2e+02 Score=25.48 Aligned_cols=76 Identities=13% Similarity=0.141 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcccceEEcC------CHHHHHHh--hCCCC-----
Q 021743 102 NTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTP------NQFEAEQL--TGFRI----- 168 (308)
Q Consensus 102 ~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~~~diitp------N~~E~~~L--~g~~~----- 168 (308)
+.+..+.+.+++. |++++..| ++.+.++.+.+ + .+++++- |..=++.+ +|.++
T Consensus 91 e~~~~L~~~~~~~--Gi~~~st~---------~d~~svd~l~~-~--~v~~~KI~S~~~~n~~LL~~va~~gkPviLstG 156 (349)
T 2wqp_A 91 EDEIKLKEYVESK--GMIFISTL---------FSRAAALRLQR-M--DIPAYKIGSGECNNYPLIKLVASFGKPIILSTG 156 (349)
T ss_dssp HHHHHHHHHHHHT--TCEEEEEE---------CSHHHHHHHHH-H--TCSCEEECGGGTTCHHHHHHHHTTCSCEEEECT
T ss_pred HHHHHHHHHHHHh--CCeEEEee---------CCHHHHHHHHh-c--CCCEEEECcccccCHHHHHHHHhcCCeEEEECC
Confidence 4555666666666 88888777 33444554433 2 1344432 22223333 35543
Q ss_pred -CCHHHHHHHHHHHHHcCCCeEEE
Q 021743 169 -GSEADGREACKILHAAGPAKVVI 191 (308)
Q Consensus 169 -~~~~d~~~~~~~l~~~g~~~Vvi 191 (308)
.+.+++..+++.+.+.|.+.+++
T Consensus 157 mat~~Ei~~Ave~i~~~G~~iiLl 180 (349)
T 2wqp_A 157 MNSIESIKKSVEIIREAGVPYALL 180 (349)
T ss_dssp TCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEE
Confidence 47899999999998888844444
No 86
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=37.33 E-value=1.3e+02 Score=22.48 Aligned_cols=64 Identities=8% Similarity=-0.015 Sum_probs=38.1
Q ss_pred HHHhcCCcceeeceEEeccCCCCCCceeeeCCHHHHHHHHHHHHhCCCcccCEEEEeccCCHhHHHHHHHHHHHHHhcCC
Q 021743 37 PLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINP 116 (308)
Q Consensus 37 ~l~~~Gi~~~~v~t~~~~~~tg~~~~~g~~~~~~~~~~~l~~l~~~~~~~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~ 116 (308)
.|+..|+++.. .|..++.+++-+...... +++|.+..+. ......+.++++.+++...
T Consensus 26 ~l~~~G~~Vi~---------------lG~~~p~e~~v~~a~~~~------~d~v~lS~~~-~~~~~~~~~~i~~l~~~g~ 83 (137)
T 1ccw_A 26 AFTNAGFNVVN---------------IGVLSPQELFIKAAIETK------ADAILVSSLY-GQGEIDCKGLRQKCDEAGL 83 (137)
T ss_dssp HHHHTTCEEEE---------------EEEEECHHHHHHHHHHHT------CSEEEEEECS-STHHHHHTTHHHHHHHTTC
T ss_pred HHHHCCCEEEE---------------CCCCCCHHHHHHHHHhcC------CCEEEEEecC-cCcHHHHHHHHHHHHhcCC
Confidence 38889997653 245667666655555443 7766555443 2345566777888877633
Q ss_pred -CceEEE
Q 021743 117 -NLIYVC 122 (308)
Q Consensus 117 -~~~vv~ 122 (308)
++++++
T Consensus 84 ~~i~v~v 90 (137)
T 1ccw_A 84 EGILLYV 90 (137)
T ss_dssp TTCEEEE
T ss_pred CCCEEEE
Confidence 355443
No 87
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=35.55 E-value=2.2e+02 Score=24.60 Aligned_cols=99 Identities=17% Similarity=0.071 Sum_probs=55.6
Q ss_pred cCEEEE-eccCC----HhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcC---CCh-hh-HHHHHHhhcccceEEcCC
Q 021743 87 YTHLLT-GYIGS----VSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLY---VPS-EL-VSVYREKVVPVASMLTPN 156 (308)
Q Consensus 87 ~~~v~~-G~l~~----~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~---~~~-~~-~~~l~~~ll~~~diitpN 156 (308)
+|+|.+ +++.+ .+..+.+.++.+.+++. +.++++++..+.. .. .++ +. .+..+...--.+|+++.+
T Consensus 122 AdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~--G~p~lv~~~~~g~--~v~~~~~~~~~v~~aa~~a~~lGaD~iKv~ 197 (304)
T 1to3_A 122 AKALKLLVLWRSDEDAQQRLNMVKEFNELCHSN--GLLSIIEPVVRPP--RCGDKFDREQAIIDAAKELGDSGADLYKVE 197 (304)
T ss_dssp CCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTT--TCEEEEEEEECCC--SSCSCCCHHHHHHHHHHHHTTSSCSEEEEC
T ss_pred CCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHc--CCcEEEEEECCCC--ccccCCChhHHHHHHHHHHHHcCCCEEEeC
Confidence 676652 33332 34456777888888876 8999999865421 11 112 22 222443222367998766
Q ss_pred HHHHHHhhCCCCCCHHHHHHHHHHHHHc-CCCeEEEeeee
Q 021743 157 QFEAEQLTGFRIGSEADGREACKILHAA-GPAKVVITSIN 195 (308)
Q Consensus 157 ~~E~~~L~g~~~~~~~d~~~~~~~l~~~-g~~~Vvit~g~ 195 (308)
..... +| +.+++.+.++..... +.++|++.+|.
T Consensus 198 ~~~~~--~g----~~~~~~~vv~~~~~~~~~P~Vv~aGG~ 231 (304)
T 1to3_A 198 MPLYG--KG----ARSDLLTASQRLNGHINMPWVILSSGV 231 (304)
T ss_dssp CGGGG--CS----CHHHHHHHHHHHHHTCCSCEEECCTTS
T ss_pred CCcCC--CC----CHHHHHHHHHhccccCCCCeEEEecCC
Confidence 53210 12 445666666655443 45558888885
No 88
>3cra_A Protein MAZG; tandem-repeat domain, hydrolase; 2.10A {Escherichia coli} PDB: 3crc_A*
Probab=35.28 E-value=93 Score=26.55 Aligned_cols=56 Identities=14% Similarity=0.108 Sum_probs=35.6
Q ss_pred CccHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHhhhhcCCC-CCCCcccc
Q 021743 230 GTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYVTAGFD-PQSSSLEI 286 (308)
Q Consensus 230 GaGD~f~a~l~~~l~~~g~~~~~A~~~A~a~~~~~i~~t~~~~~~~~~~-~~~~~~~~ 286 (308)
--||.+-+.+..+-.. |-++++|++.++.-...-.++.-+.....|.+ .+++..||
T Consensus 195 ElGDlLFalVnlAR~~-gIDpE~ALr~an~KF~~Rf~~~E~~~~~~g~~l~~~sl~e~ 251 (265)
T 3cra_A 195 EMGDLLFATVNLARHL-GTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETM 251 (265)
T ss_dssp HHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC----CCH
T ss_pred HHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCHHHH
Confidence 3599999888777666 89999999999875555555444433444643 34444555
No 89
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=35.11 E-value=2.1e+02 Score=24.37 Aligned_cols=108 Identities=16% Similarity=0.106 Sum_probs=58.8
Q ss_pred CHHHHHHHHHHHHhCCCcccCEEEEeccCCHh--------HHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhH
Q 021743 68 NGQQLCDLIEGLEANNLLYYTHLLTGYIGSVS--------FLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELV 139 (308)
Q Consensus 68 ~~~~~~~~l~~l~~~~~~~~~~v~~G~l~~~~--------~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~ 139 (308)
+.+...++.+.+++.. .++++.+..-... ..+.+..+.+.+++. |++++.+| .+++..
T Consensus 50 ~~e~a~~~a~~~k~~g---a~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~--Gl~~~te~---------~d~~~~ 115 (276)
T 1vs1_A 50 SWEQVREAALAVKEAG---AHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEA--GLPVVTEV---------LDPRHV 115 (276)
T ss_dssp CHHHHHHHHHHHHHHT---CSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCCEEEEC---------CCGGGH
T ss_pred CHHHHHHHHHHHHHhC---CCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHc--CCcEEEec---------CCHHHH
Confidence 3456666666666543 4566554321110 123343444444454 88888887 233444
Q ss_pred HHHHHhhcccceEEcC------CHHHHHHh--hCCCC------C-CHHHHHHHHHHHHHcCCCeEEEee
Q 021743 140 SVYREKVVPVASMLTP------NQFEAEQL--TGFRI------G-SEADGREACKILHAAGPAKVVITS 193 (308)
Q Consensus 140 ~~l~~~ll~~~diitp------N~~E~~~L--~g~~~------~-~~~d~~~~~~~l~~~g~~~Vvit~ 193 (308)
+.+.+ + +|+++- |..=++.+ +|.++ . +.+++..+++.+...|.+.+++..
T Consensus 116 ~~l~~-~---vd~~kIgs~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~ 180 (276)
T 1vs1_A 116 ETVSR-Y---ADMLQIGARNMQNFPLLREVGRSGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVE 180 (276)
T ss_dssp HHHHH-H---CSEEEECGGGTTCHHHHHHHHHHTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred HHHHH-h---CCeEEECcccccCHHHHHHHHccCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEe
Confidence 44443 3 344432 33222222 35553 2 678999999999888887777754
No 90
>2fds_A Orotidine-monophosphate-decarboxylase; TIM barrel, structural genomics, structural genomics consortium, SGC, unknown function; 1.72A {Plasmodium berghei} SCOP: c.1.2.3 PDB: 2aqw_A
Probab=31.17 E-value=1.9e+02 Score=25.67 Aligned_cols=40 Identities=18% Similarity=0.164 Sum_probs=28.1
Q ss_pred cCEEEEec-cC---CHhHHHHHHHHHHHHHhcCCCceEEEcccccc
Q 021743 87 YTHLLTGY-IG---SVSFLNTILQVVEKLRSINPNLIYVCDPVMGD 128 (308)
Q Consensus 87 ~~~v~~G~-l~---~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~ 128 (308)
.+++++|+ +- ...-+..+.++++.+++. +.+|++|.-..|
T Consensus 119 v~~vKvg~~lf~~~G~~gv~~L~~~i~~lk~~--g~~VflDlK~~D 162 (352)
T 2fds_A 119 ALIYKMNFAFYIPYGSVGINALKNVFDYLNSM--NIPTMLDMKIND 162 (352)
T ss_dssp CSEEEEEGGGTGGGTHHHHHHHHHHHHHHHHT--TCCEEEEEEECC
T ss_pred cCEEEecHHHHHhCCHHHHHHHHHHHHHHHHC--CCeEEEEeecCc
Confidence 67899996 32 233355667778888876 789999975554
No 91
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=30.62 E-value=21 Score=33.32 Aligned_cols=21 Identities=19% Similarity=0.305 Sum_probs=16.8
Q ss_pred CCCCCCccHHHH-HHHHHHHcc
Q 021743 225 PAYFTGTGDLMT-ALLLGWSNK 245 (308)
Q Consensus 225 ~~~t~GaGD~f~-a~l~~~l~~ 245 (308)
+..|+|.||+++ ++|++.+..
T Consensus 443 P~~TVGLGDtISa~gfv~~l~~ 464 (467)
T 1gc5_A 443 PKSTVGIGDTISSSAFVSEFGM 464 (467)
T ss_dssp CSCCSSHHHHHHHHHHHHHHHH
T ss_pred CCceecCCcchhhHHHHHHHHH
Confidence 358999999995 688888753
No 92
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=30.51 E-value=1.1e+02 Score=25.84 Aligned_cols=54 Identities=11% Similarity=0.066 Sum_probs=37.0
Q ss_pred ceeeeCCHHHHHHHHHHHHhCCCcccCEEEEeccCC-HhHHHHHHHHHHHHHhcCCCceEE
Q 021743 62 FKGQVLNGQQLCDLIEGLEANNLLYYTHLLTGYIGS-VSFLNTILQVVEKLRSINPNLIYV 121 (308)
Q Consensus 62 ~~g~~~~~~~~~~~l~~l~~~~~~~~~~v~~G~l~~-~~~~~~~~~~l~~~k~~~~~~~vv 121 (308)
+..+.++...++.+|+.... +.|.+|.|.-.+ -.+.+.+.+.++.++++ ++++.
T Consensus 18 v~dkglg~~~~~d~Le~~g~----yID~lKfg~Gt~~l~~~~~l~eki~l~~~~--gV~v~ 72 (251)
T 1qwg_A 18 VLDKGLPPKFVEDYLKVCGD----YIDFVKFGWGTSAVIDRDVVKEKINYYKDW--GIKVY 72 (251)
T ss_dssp EEESSCCHHHHHHHHHHHGG----GCSEEEECTTGGGGSCHHHHHHHHHHHHTT--TCEEE
T ss_pred EecCCCCHHHHHHHHHHhhh----hcceEEecCceeeecCHHHHHHHHHHHHHc--CCeEE
Confidence 33455777889999988775 588999985322 22245677888888876 66654
No 93
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=29.21 E-value=22 Score=33.05 Aligned_cols=20 Identities=20% Similarity=0.351 Sum_probs=12.7
Q ss_pred CCCCCCccHHHH-HHHHHHHc
Q 021743 225 PAYFTGTGDLMT-ALLLGWSN 244 (308)
Q Consensus 225 ~~~t~GaGD~f~-a~l~~~l~ 244 (308)
+..|+|.||+++ ++|++.+.
T Consensus 435 P~~TVGLGDtISa~gfv~~l~ 455 (457)
T 1l2l_A 435 PKSTVGIGDTISSSAFVSEFS 455 (457)
T ss_dssp -----CTTHHHHHHHHHHHHH
T ss_pred CCceecCCcchhhHHHHHHHh
Confidence 358999999995 58888775
No 94
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=28.98 E-value=25 Score=32.65 Aligned_cols=21 Identities=24% Similarity=0.396 Sum_probs=17.1
Q ss_pred CCCCCCccHHHH-HHHHHHHcc
Q 021743 225 PAYFTGTGDLMT-ALLLGWSNK 245 (308)
Q Consensus 225 ~~~t~GaGD~f~-a~l~~~l~~ 245 (308)
+..|+|.||+++ ++|++.|..
T Consensus 432 P~~TVGlGDtiSa~gf~~~l~~ 453 (455)
T 1ua4_A 432 PKSTVGIGDTISSSAFIGEFSF 453 (455)
T ss_dssp CSCCTTHHHHHHHHHHHHHHHT
T ss_pred CCceecCCcchhhHHHHHHHHh
Confidence 368999999995 689888764
No 95
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=28.57 E-value=2.7e+02 Score=24.74 Aligned_cols=24 Identities=8% Similarity=0.160 Sum_probs=18.1
Q ss_pred CCHHHHHHHHHHHHHcCCCeEEEe
Q 021743 169 GSEADGREACKILHAAGPAKVVIT 192 (308)
Q Consensus 169 ~~~~d~~~~~~~l~~~g~~~Vvit 192 (308)
.+.+++..+++.+.+.|.+.+++.
T Consensus 145 stl~Ei~~Ave~i~~~g~~viLlh 168 (350)
T 3g8r_A 145 ARREDIDKVVSFMLHRGKDLTIMH 168 (350)
T ss_dssp CCHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEe
Confidence 478999999998887777544443
No 96
>3l52_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, PSI-2, protein structure initiative; 1.35A {Streptomyces avermitilis} PDB: 3v75_A*
Probab=28.46 E-value=2.3e+02 Score=24.30 Aligned_cols=64 Identities=16% Similarity=0.129 Sum_probs=39.7
Q ss_pred ccCEEEEec---cCC-HhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcc-----cceEEcCC
Q 021743 86 YYTHLLTGY---IGS-VSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP-----VASMLTPN 156 (308)
Q Consensus 86 ~~~~v~~G~---l~~-~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~-----~~diitpN 156 (308)
...++|+|+ ... ..-...+.++++.++++ +.+|++|.-..|= +.+...+.+.++. .+|++|.|
T Consensus 62 ~v~~~Kvg~~lf~~~G~~G~~~l~~~i~~l~~~--g~~VflDlK~~DI------pnTv~~ya~~~~~~~~~lg~D~vTvh 133 (284)
T 3l52_A 62 HVAVFKPQSAFFERFGSRGVAVLEKTVAEARAA--GALVVMDAKRGDI------GSTMAAYAEAFLRKDSPLFSDALTVS 133 (284)
T ss_dssp TCSEEEEBHHHHHTTHHHHHHHHHHHHHHHHHT--TCEEEEEEEECCC------HHHHHHHHHHHSSTTSTTCCSEEEEC
T ss_pred cceEEEeeHHHHHhcCHHHHHHHHHHHHHHHHC--CCcEEEEecccCc------HHHHHHHHHHHhccccccCCcEEEEe
Confidence 367899995 222 23356778888888886 7899999865541 1222233333442 37888877
Q ss_pred H
Q 021743 157 Q 157 (308)
Q Consensus 157 ~ 157 (308)
.
T Consensus 134 ~ 134 (284)
T 3l52_A 134 P 134 (284)
T ss_dssp C
T ss_pred c
Confidence 3
No 97
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=28.15 E-value=2.9e+02 Score=23.77 Aligned_cols=58 Identities=9% Similarity=0.043 Sum_probs=40.1
Q ss_pred eCCHHHHHHHHHHHHhCCCcccCEEEEeccCCH--hHHHHHHHHHHHHHhcCCCceEEEccccc
Q 021743 66 VLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSV--SFLNTILQVVEKLRSINPNLIYVCDPVMG 127 (308)
Q Consensus 66 ~~~~~~~~~~l~~l~~~~~~~~~~v~~G~l~~~--~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~ 127 (308)
..+.++++.+++++........|.|.+|.|... ...+.+.++++.++ +..+.|.+.+.
T Consensus 104 ~Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~----~l~vTFHRAFD 163 (287)
T 3iwp_A 104 LYSDREIEVMKADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICR----PLPVTFHRAFD 163 (287)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHT----TSCEEECGGGG
T ss_pred ccCHHHHHHHHHHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcC----CCcEEEECchh
Confidence 345677777777766542224789999998654 55777888888764 46788887643
No 98
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=27.58 E-value=86 Score=26.90 Aligned_cols=58 Identities=16% Similarity=0.204 Sum_probs=38.3
Q ss_pred CCCCceeeeCCHHHHHHHHHHHHhCCCcccCEEEEeccCCHhHHHHHHHHHHHHHhcCCCceEEE
Q 021743 58 GYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVC 122 (308)
Q Consensus 58 g~~~~~g~~~~~~~~~~~l~~l~~~~~~~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~ 122 (308)
|+..+....++...++.+|+.... ..|.+|.|.-.+....+ +.+.++.+++. ++++..
T Consensus 41 GlT~v~Dkglg~~~~~DlLe~ag~----yID~lKfg~GTs~l~~~-l~ekI~l~~~~--gV~v~~ 98 (276)
T 1u83_A 41 GQSILIDNGYPLQFFKDAIAGASD----YIDFVKFGWGTSLLTKD-LEEKISTLKEH--DITFFF 98 (276)
T ss_dssp SCEEEEESSCCHHHHHHHHHHHGG----GCCEEEECTTGGGGCTT-HHHHHHHHHHT--TCEEEE
T ss_pred CceEEecCCCCHHHHHHHHHHhhh----hcceEEecCcchhhhHH-HHHHHHHHHHc--CCeEeC
Confidence 433344556788899999998775 58999998533322222 67777778776 666543
No 99
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=26.91 E-value=2.2e+02 Score=25.34 Aligned_cols=40 Identities=15% Similarity=0.142 Sum_probs=28.2
Q ss_pred cCEEEEec-cC---CHhHHHHHHHHHHHHHhcCCCceEEEcccccc
Q 021743 87 YTHLLTGY-IG---SVSFLNTILQVVEKLRSINPNLIYVCDPVMGD 128 (308)
Q Consensus 87 ~~~v~~G~-l~---~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~ 128 (308)
++++++|+ +- ...-...+.+.++.++++ +.+|++|.-..|
T Consensus 129 v~~vKvg~~lfea~G~~gi~~L~~~v~~lr~~--g~~VflDlK~~D 172 (353)
T 2ffc_A 129 ALAYKMNFAFYLPYGSLGVDVLKNVFDYLHHL--NVPTILDIKMND 172 (353)
T ss_dssp CSEEEEEGGGGSTTTHHHHHHHHHHHHHHHHH--TCCEEEEEEECC
T ss_pred cceeeccHHHHHhcCHHHHHHHHHHHHHHHHc--CCcEEEEEecCc
Confidence 57899996 22 233355677778888887 789999975544
No 100
>1ztd_A Hypothetical protein PFU-631545-001; structural genomics, southeast collaboratory for structural genomics, secsg; 2.00A {Pyrococcus furiosus} SCOP: a.149.1.2
Probab=25.70 E-value=60 Score=23.73 Aligned_cols=31 Identities=19% Similarity=-0.058 Sum_probs=25.8
Q ss_pred CCCCCccHHHHHHHHHHHccCCCCHHHHHHH
Q 021743 226 AYFTGTGDLMTALLLGWSNKYRDNLDIAAEL 256 (308)
Q Consensus 226 ~~t~GaGD~f~a~l~~~l~~~g~~~~~A~~~ 256 (308)
.|-+|-||..-|.+++++.+.-.+.+||++.
T Consensus 64 ~DKh~kGd~aEA~iAyAWleG~is~eEavei 94 (133)
T 1ztd_A 64 VDKHAKGDYAEALIAKAWLMGLISEREAVEI 94 (133)
T ss_dssp GGTTCHHHHHHHHHHHHHHTTSSCHHHHHHH
T ss_pred ccccCccHHHHHHHHHHHHhccccHHHHHHH
Confidence 4789999999999999999823688888764
No 101
>3n3m_A Orotidine 5'-phosphate decarboxylase; P. falciparum, 5'-monophosphate decarboxylase, 6- UMP, lyase; HET: PGE NUP; 1.47A {Plasmodium falciparum} SCOP: c.1.2.3 PDB: 2qaf_A* 3bar_A* 2q8z_A* 3mwa_A* 3n2m_A* 3bpw_A* 3n34_A* 3s9y_A* 2f84_A 2q8l_A 2za1_A* 2za2_A 2za3_A* 2zcg_A 3vi2_A*
Probab=25.30 E-value=3.1e+02 Score=24.20 Aligned_cols=41 Identities=15% Similarity=0.218 Sum_probs=28.9
Q ss_pred ccCEEEEec-cC---CHhHHHHHHHHHHHHHhcCCCceEEEcccccc
Q 021743 86 YYTHLLTGY-IG---SVSFLNTILQVVEKLRSINPNLIYVCDPVMGD 128 (308)
Q Consensus 86 ~~~~v~~G~-l~---~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~ 128 (308)
..+++|+|+ +- ...-+..+.++++.+++. +.+|++|.-..|
T Consensus 116 ~v~~vKvG~~lf~~~G~~gv~~l~~l~~~l~~~--g~~VflDlK~~D 160 (342)
T 3n3m_A 116 YALTFKMNFAFYIPYGSVGIDVLKNVFDYLYEL--NIPTILDMKIND 160 (342)
T ss_dssp GCSEEEEEGGGTSTTTHHHHHHHHHHHHHHHHH--TCCEEEEEEECC
T ss_pred cCcEEEecHHHHHhcCHHHHHHHHHHHHHHHhC--CCeEEEEeecCC
Confidence 367899996 22 223356778888888776 788999985554
No 102
>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel, unusual catalysis, disease mutati glycosyltransferase, lyase, multifunctional enzyme; HET: U1P; 1.10A {Homo sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A* 3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A* 3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3l0k_A* 3l0n_A* ...
Probab=23.83 E-value=1.7e+02 Score=24.70 Aligned_cols=55 Identities=15% Similarity=0.141 Sum_probs=32.3
Q ss_pred CHHHHHHHHHHHHhCCCcccCEEEEec-cCCHhHHHHHHHHHHHHHhcCCCceEEEcccccc
Q 021743 68 NGQQLCDLIEGLEANNLLYYTHLLTGY-IGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD 128 (308)
Q Consensus 68 ~~~~~~~~l~~l~~~~~~~~~~v~~G~-l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~ 128 (308)
+.++...+++.+.. ..+.+++|+ +-...-.+.+.++.+.++.. +.+|++|--+.|
T Consensus 42 ~~~~al~l~~~l~~----~v~~~KvG~~l~~~~G~~~v~~L~~~a~~~--g~~VflDlK~~D 97 (260)
T 3eww_A 42 LARELLQLADALGP----SICMLKTHVDILNDFTLDVMKELITLAKCH--EFLIFENRKFAD 97 (260)
T ss_dssp CHHHHHHHHHHHGG----GCSEEEECGGGCTTCCHHHHHHHHHHHHHH--TCEEEEEEEECS
T ss_pred CHHHHHHHHHHhCC----CceEEEEcHHHHHHhCHHHHHHHHHHHhhc--CCeEEEEeeccc
Confidence 34566667776653 367899995 32222234444444443334 678999975554
No 103
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=22.85 E-value=1.7e+02 Score=24.86 Aligned_cols=45 Identities=16% Similarity=0.197 Sum_probs=26.6
Q ss_pred eeeCCHHHHHHHHHHHHhCCCcccCEEEEeccCCH--hHHHHHHHHHHHHHhc
Q 021743 64 GQVLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSV--SFLNTILQVVEKLRSI 114 (308)
Q Consensus 64 g~~~~~~~~~~~l~~l~~~~~~~~~~v~~G~l~~~--~~~~~~~~~l~~~k~~ 114 (308)
|..++.+++-+...... +|+|.+..+... .....+.++++.+++.
T Consensus 164 G~~vp~e~iv~aa~e~~------~d~VglS~l~t~~~~~~~~~~~~i~~L~~~ 210 (262)
T 1xrs_B 164 GSQVANEDFIKKAVELE------ADVLLVSQTVTQKNVHIQNMTHLIELLEAE 210 (262)
T ss_dssp CSSBCHHHHHHHHHHTT------CSEEEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHcC------CCEEEEEeecCCccchHHHHHHHHHHHHhc
Confidence 45567666544444332 786665443322 2567777888888876
No 104
>3r89_A Orotidine 5'-phosphate decarboxylase; PSI-biology, midwest center for structural genomics, MCSG, O 5-phosphate decarboxylase, lyase; 1.84A {Anaerococcus prevotii}
Probab=22.74 E-value=2.7e+02 Score=23.95 Aligned_cols=63 Identities=13% Similarity=0.109 Sum_probs=37.9
Q ss_pred cCEEEEec-c--C-CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcCCChhhHHHHHHhhcc---cceEEcCCH
Q 021743 87 YTHLLTGY-I--G-SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP---VASMLTPNQ 157 (308)
Q Consensus 87 ~~~v~~G~-l--~-~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~l~~~ll~---~~diitpN~ 157 (308)
..++|+|+ + . ...-+..+.++++.++++ +.+|++|.-..|= +.+...+.+.++. .+|++|.|.
T Consensus 60 v~~~Kvg~~lf~~~G~~~v~~L~~~i~~~~~~--g~~VflDlK~~DI------pnTv~~~a~~~~~~~lg~D~vTvh~ 129 (290)
T 3r89_A 60 CAIYKLQIAYYESYGIEGMIAYRDTLSYLREK--DLLSIGDVKRSDI------AASAKMYAKAHFEGDFETDFITLNP 129 (290)
T ss_dssp CSEEEEEHHHHHTTHHHHHHHHHHHHHHHHHT--TCCEEEEEEECCC------HHHHHHHHHHHHSGGGCCSEEEECC
T ss_pred ceEEEecHHHHHhcCHHHHHHHHHHHHHHHHC--CCeEEEEecccCc------HHHHHHHHHHHhccccCCCEEEEcc
Confidence 66899995 2 2 223355666778888876 7899999865541 1222223322333 378887774
No 105
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=22.72 E-value=1.3e+02 Score=26.17 Aligned_cols=53 Identities=23% Similarity=0.271 Sum_probs=33.9
Q ss_pred eCCHHHHHHHHHHHHhCCCcccCEEEE-------eccCCHhHHHHHHHHHHHHHhcCCCceEEEcccc
Q 021743 66 VLNGQQLCDLIEGLEANNLLYYTHLLT-------GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVM 126 (308)
Q Consensus 66 ~~~~~~~~~~l~~l~~~~~~~~~~v~~-------G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~ 126 (308)
.++.++++.+.+.+. +++|-+ |+..++...+.+.++++.+++. |+.|++|.-.
T Consensus 68 ~~~~~~~~~l~~~~G------~N~VRi~~~~~~~~~~~~~~~~~~ld~~v~~a~~~--Gi~VilD~H~ 127 (327)
T 3pzt_A 68 YVNKDSLKWLRDDWG------ITVFRAAMYTADGGYIDNPSVKNKVKEAVEAAKEL--GIYVIIDWHI 127 (327)
T ss_dssp GCSHHHHHHHHHHTC------CSEEEEEEESSTTSTTTCGGGHHHHHHHHHHHHHH--TCEEEEEEEC
T ss_pred CCCHHHHHHHHHhcC------CCEEEEEeEECCCCcccCHHHHHHHHHHHHHHHHC--CCEEEEEecc
Confidence 455555555433332 555544 2333455577888899999988 8999999743
No 106
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=22.11 E-value=1.7e+02 Score=25.25 Aligned_cols=49 Identities=12% Similarity=0.076 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhCCCcccCEEEEeccCCHhH--HHHHHHHHHHHHhcCCCceEEE-cc
Q 021743 70 QQLCDLIEGLEANNLLYYTHLLTGYIGSVSF--LNTILQVVEKLRSINPNLIYVC-DP 124 (308)
Q Consensus 70 ~~~~~~l~~l~~~~~~~~~~v~~G~l~~~~~--~~~~~~~l~~~k~~~~~~~vv~-Dp 124 (308)
+...+.++.+.+.+ .|++++|+.. .+ .+.+.++++.+|+.. ++|+|+ -|
T Consensus 53 ~~~~~~~~~~~~sG---tDai~VGS~~--vt~~~~~~~~~v~~ik~~~-~lPvil~fP 104 (286)
T 3vk5_A 53 TEAVEKAAELTRLG---FAAVLLASTD--YESFESHMEPYVAAVKAAT-PLPVVLHFP 104 (286)
T ss_dssp HHHHHHHHHHHHTT---CSCEEEECSC--CSSHHHHHHHHHHHHHHHC-SSCEEEECC
T ss_pred HHHHHHHHHHHhcC---CCEEEEccCC--CCcchHHHHHHHHHHHHhC-CCCEEEECC
Confidence 45555666666543 6899999432 33 456667778888743 789998 66
No 107
>4eys_A MCCC family protein; MCCF like, serine peptidase, csgid, structural genomics, NIA national institute of allergy and infectious diseases; HET: AMP; 1.58A {Streptococcus pneumoniae} PDB: 4e94_A*
Probab=21.72 E-value=1.5e+02 Score=26.08 Aligned_cols=57 Identities=14% Similarity=0.193 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHhCCCcc-cCEEEEeccCCHhHHHHHHHHHHHHHhcCCCceEEEccccc
Q 021743 69 GQQLCDLIEGLEANNLLY-YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG 127 (308)
Q Consensus 69 ~~~~~~~l~~l~~~~~~~-~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~ 127 (308)
+..++.+|..|+..+++. +.+|++|-.........+.+++...-.. ++||+.|.-.+
T Consensus 260 ~y~idRmL~qL~~aG~f~~~~GiilG~~~~~~~~~~~~~vl~~~l~~--~iPV~~~~~~G 317 (346)
T 4eys_A 260 PEDFKKMLLTLKDTGIFAVINGLLVGKPMDETFHDDYKEALLDIIDS--NIPIVYNLNVG 317 (346)
T ss_dssp HHHHHHHHHHHHTTTGGGTCSEEEEECCGGGTTHHHHHHHHHHHSCT--TSCEEEEESCS
T ss_pred HHHHHHHHHHHHHcCCcccCCEEEEecCCCCCcchhHHHHHHHHHcC--CCcEEECCCCC
Confidence 358999999999887654 7899999865433333455665555433 78999997655
No 108
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=21.63 E-value=2.3e+02 Score=20.44 Aligned_cols=32 Identities=3% Similarity=0.110 Sum_probs=18.6
Q ss_pred cCEEEEec-cCCHhHHHHHHHHHHHHHhcCCCceEEE
Q 021743 87 YTHLLTGY-IGSVSFLNTILQVVEKLRSINPNLIYVC 122 (308)
Q Consensus 87 ~~~v~~G~-l~~~~~~~~~~~~l~~~k~~~~~~~vv~ 122 (308)
+|+|++.. ++..... ++++.+++..+++++|+
T Consensus 59 ~dlvi~D~~l~~~~g~----~~~~~l~~~~~~~~ii~ 91 (153)
T 3hv2_A 59 VDLVISAAHLPQMDGP----TLLARIHQQYPSTTRIL 91 (153)
T ss_dssp CSEEEEESCCSSSCHH----HHHHHHHHHCTTSEEEE
T ss_pred CCEEEEeCCCCcCcHH----HHHHHHHhHCCCCeEEE
Confidence 78888876 4543333 34445555556777664
No 109
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=20.75 E-value=3e+02 Score=21.42 Aligned_cols=22 Identities=9% Similarity=0.401 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHhcCCCceEEE
Q 021743 101 LNTILQVVEKLRSINPNLIYVC 122 (308)
Q Consensus 101 ~~~~~~~l~~~k~~~~~~~vv~ 122 (308)
.+.+.++++.+++..|+.+|++
T Consensus 104 ~~~l~~li~~i~~~~p~~~ii~ 125 (215)
T 2vpt_A 104 ATGLSNLIDQIFTVKPNVTLFV 125 (215)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEE
Confidence 4567788888888777777665
No 110
>3g3d_A UMP synthase, uridine 5'-monophosphate synthase; C-terminal domain, orotidine 5'-monophosphate decarboxylase, human, 5-fluoro-6-azido-UMP; HET: 5FU; 1.70A {Homo sapiens} PDB: 3bvj_A* 3mw7_A* 4hib_A* 4hkp_A* 2p1f_A 2eaw_A 3bgg_A* 3bgj_A*
Probab=20.54 E-value=2.1e+02 Score=24.92 Aligned_cols=55 Identities=16% Similarity=0.156 Sum_probs=32.4
Q ss_pred CHHHHHHHHHHHHhCCCcccCEEEEec-cCCHhHHHHHHHHHHHHHhcCCCceEEEcccccc
Q 021743 68 NGQQLCDLIEGLEANNLLYYTHLLTGY-IGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD 128 (308)
Q Consensus 68 ~~~~~~~~l~~l~~~~~~~~~~v~~G~-l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dpv~~~ 128 (308)
+.++...+++.+.. ..+++++|+ +-...-.+.+.++.+.++.. +.+|++|--+.|
T Consensus 94 ~~~~al~l~~~l~~----~v~~vKvG~~l~~~~G~~~v~~L~~~a~~~--g~~IflDlK~~D 149 (312)
T 3g3d_A 94 LARELLQLADALGP----SICMLKTHVDILNDFTLDVMKELITLAKCH--EFLIFEDRKFAD 149 (312)
T ss_dssp CHHHHHHHHHHHGG----GCSEEEECGGGCTTCCHHHHHHHHHHHHHH--TCEEEEEEEECS
T ss_pred CHHHHHHHHHHhCC----CceEEEEcHHHHHHhCHHHHHHHHHHHhhC--CCEEEEECcccc
Confidence 34566666666653 367899995 32222244555544444434 778999986554
No 111
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=20.51 E-value=3.2e+02 Score=21.61 Aligned_cols=21 Identities=14% Similarity=0.078 Sum_probs=13.2
Q ss_pred CCCCCCCeEEEEeccCccCcc
Q 021743 9 ALPSETGRVLSIQSHTVQGYV 29 (308)
Q Consensus 9 ~~~~~~~~Vl~i~~~~~~G~~ 29 (308)
...++|++|+.+++|-..|+.
T Consensus 18 ~~q~~~~~I~~lGDSit~G~~ 38 (232)
T 3dci_A 18 YFQGHMKTVLAFGDSLTWGAD 38 (232)
T ss_dssp -----CEEEEEEESHHHHTBC
T ss_pred cccCCCCEEEEEECccccCCC
Confidence 345678899999998866654
Done!