Query 021744
Match_columns 308
No_of_seqs 363 out of 2698
Neff 10.8
Searched_HMMs 29240
Date Mon Mar 25 08:39:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021744.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021744hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 6.3E-41 2.2E-45 283.8 29.9 259 25-299 47-318 (321)
2 1vyh_C Platelet-activating fac 100.0 1.8E-40 6.2E-45 290.3 33.4 256 26-299 120-408 (410)
3 1got_B GT-beta; complex (GTP-b 100.0 3.4E-40 1.2E-44 281.5 32.7 257 25-298 66-339 (340)
4 2ynn_A Coatomer subunit beta'; 100.0 4.6E-40 1.6E-44 276.4 31.2 251 25-292 24-292 (304)
5 4gqb_B Methylosome protein 50; 100.0 1.7E-40 5.7E-45 283.6 26.5 266 26-299 42-328 (344)
6 2pbi_B Guanine nucleotide-bind 100.0 6.1E-38 2.1E-42 269.0 34.4 256 26-298 76-353 (354)
7 4g56_B MGC81050 protein; prote 100.0 2.2E-38 7.7E-43 272.0 26.8 261 25-299 53-340 (357)
8 3iz6_a 40S ribosomal protein R 100.0 8.1E-38 2.8E-42 270.8 28.0 258 25-299 77-372 (380)
9 4ery_A WD repeat-containing pr 100.0 1.4E-36 4.9E-41 255.8 30.1 257 25-299 34-309 (312)
10 2ynn_A Coatomer subunit beta'; 100.0 2.9E-36 1E-40 253.2 29.9 232 62-299 7-256 (304)
11 2hes_X YDR267CP; beta-propelle 100.0 1.7E-36 5.8E-41 257.6 27.9 263 28-300 26-326 (330)
12 1nr0_A Actin interacting prote 100.0 2.3E-36 7.8E-41 277.2 30.6 257 27-299 161-564 (611)
13 1vyh_C Platelet-activating fac 100.0 3.5E-36 1.2E-40 263.1 30.3 231 63-299 103-366 (410)
14 3frx_A Guanine nucleotide-bind 100.0 4.6E-36 1.6E-40 253.7 29.4 260 25-299 29-314 (319)
15 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.4E-36 1.9E-40 256.0 29.3 266 25-299 27-332 (345)
16 2xzm_R RACK1; ribosome, transl 100.0 4.5E-35 1.5E-39 250.1 33.0 264 25-299 38-337 (343)
17 4gqb_B Methylosome protein 50; 100.0 4.1E-36 1.4E-40 256.4 25.6 224 26-259 93-332 (344)
18 3ow8_A WD repeat-containing pr 100.0 2.3E-35 7.8E-40 249.7 29.2 231 64-299 28-276 (321)
19 1nr0_A Actin interacting prote 100.0 2.1E-35 7.3E-40 270.7 31.1 258 26-299 30-352 (611)
20 1gxr_A ESG1, transducin-like e 100.0 3.5E-34 1.2E-38 242.8 35.1 260 25-298 62-333 (337)
21 2ymu_A WD-40 repeat protein; u 100.0 5.4E-35 1.8E-39 265.9 30.9 251 25-298 314-576 (577)
22 1erj_A Transcriptional repress 100.0 2.7E-34 9.1E-39 249.8 32.1 267 25-299 75-386 (393)
23 3frx_A Guanine nucleotide-bind 100.0 2.7E-34 9.1E-39 242.9 30.3 229 63-298 12-263 (319)
24 3vl1_A 26S proteasome regulato 100.0 8.2E-34 2.8E-38 248.2 33.0 257 26-299 68-362 (420)
25 2ymu_A WD-40 repeat protein; u 100.0 7.3E-34 2.5E-38 258.4 33.4 254 25-301 273-538 (577)
26 1got_B GT-beta; complex (GTP-b 100.0 1.1E-33 3.6E-38 241.3 31.2 231 63-299 50-298 (340)
27 4g56_B MGC81050 protein; prote 100.0 1.1E-34 3.9E-39 249.0 25.1 255 26-300 16-299 (357)
28 4aow_A Guanine nucleotide-bind 100.0 1.1E-33 3.7E-38 240.3 30.5 268 24-299 49-334 (340)
29 3dm0_A Maltose-binding peripla 100.0 8.9E-34 3E-38 263.7 31.7 264 24-300 393-691 (694)
30 3i2n_A WD repeat-containing pr 100.0 4.8E-34 1.6E-38 244.0 26.9 264 25-299 30-350 (357)
31 3ei3_B DNA damage-binding prot 100.0 6.3E-34 2.2E-38 246.3 27.4 257 26-300 86-380 (383)
32 3zwl_B Eukaryotic translation 100.0 7E-33 2.4E-37 237.5 32.9 282 3-302 16-346 (369)
33 4aez_A CDC20, WD repeat-contai 100.0 3.5E-33 1.2E-37 243.3 31.3 259 26-299 103-377 (401)
34 3odt_A Protein DOA1; ubiquitin 100.0 7.5E-33 2.5E-37 232.3 31.2 252 26-300 29-294 (313)
35 2pm9_A Protein WEB1, protein t 100.0 1.5E-33 5.3E-38 246.0 27.7 263 23-299 22-334 (416)
36 2pbi_B Guanine nucleotide-bind 100.0 6.9E-33 2.3E-37 237.6 31.2 232 63-299 59-312 (354)
37 2j04_B YDR362CP, TAU91; beta p 100.0 1.8E-34 6.3E-39 258.4 22.2 266 26-299 173-514 (524)
38 1sq9_A Antiviral protein SKI8; 100.0 1.3E-33 4.4E-38 245.1 26.6 261 27-299 27-392 (397)
39 3gre_A Serine/threonine-protei 100.0 1.3E-33 4.3E-38 248.6 26.6 261 25-298 75-436 (437)
40 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.4E-33 8.4E-38 239.6 27.4 235 64-298 11-279 (345)
41 3iz6_a 40S ribosomal protein R 100.0 1.8E-33 6.3E-38 243.5 26.9 230 25-259 119-376 (380)
42 2xzm_R RACK1; ribosome, transl 100.0 6.3E-33 2.2E-37 236.8 29.7 231 63-298 16-281 (343)
43 1erj_A Transcriptional repress 100.0 1E-32 3.5E-37 239.8 31.5 232 66-299 62-338 (393)
44 2pm7_B Protein transport prote 100.0 1.8E-32 6.2E-37 229.3 31.3 235 64-299 5-282 (297)
45 4e54_B DNA damage-binding prot 100.0 8.2E-34 2.8E-38 249.9 23.9 273 10-302 120-430 (435)
46 2aq5_A Coronin-1A; WD40 repeat 100.0 4.6E-33 1.6E-37 242.6 28.2 263 27-301 48-343 (402)
47 3v7d_B Cell division control p 100.0 2E-32 6.8E-37 242.8 32.0 254 26-300 132-419 (464)
48 3vl1_A 26S proteasome regulato 100.0 6E-33 2E-37 242.8 28.1 260 25-298 108-415 (420)
49 1r5m_A SIR4-interacting protei 100.0 5.5E-33 1.9E-37 242.6 27.6 259 25-299 119-422 (425)
50 3k26_A Polycomb protein EED; W 100.0 8.1E-34 2.8E-38 243.2 21.7 267 24-299 32-363 (366)
51 4ery_A WD repeat-containing pr 100.0 5.6E-32 1.9E-36 227.7 31.7 231 63-299 18-265 (312)
52 2pm9_A Protein WEB1, protein t 100.0 1.3E-33 4.6E-38 246.3 21.5 266 25-299 78-411 (416)
53 2pm7_B Protein transport prote 100.0 2.1E-32 7.3E-37 228.9 27.6 223 26-258 21-285 (297)
54 4gga_A P55CDC, cell division c 100.0 7.9E-32 2.7E-36 236.2 32.0 256 26-299 116-392 (420)
55 3bg1_A Protein SEC13 homolog; 100.0 3.4E-33 1.2E-37 235.8 22.5 237 63-299 8-290 (316)
56 1p22_A F-BOX/WD-repeat protein 100.0 2.1E-32 7.2E-37 240.9 27.5 256 26-299 143-411 (435)
57 1gxr_A ESG1, transducin-like e 100.0 8.6E-32 2.9E-36 228.0 29.7 228 66-299 49-293 (337)
58 3dw8_B Serine/threonine-protei 100.0 5.5E-33 1.9E-37 244.8 23.2 269 25-300 39-444 (447)
59 2ovr_B FBW7, F-BOX/WD repeat p 100.0 9.8E-32 3.3E-36 237.2 31.0 242 27-291 170-426 (445)
60 1k8k_C P40, ARP2/3 complex 41 100.0 4.8E-32 1.6E-36 233.0 28.1 263 26-299 20-358 (372)
61 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.6E-31 1.2E-35 233.6 33.4 249 26-299 129-388 (445)
62 2hes_X YDR267CP; beta-propelle 100.0 8.7E-32 3E-36 228.6 28.2 234 64-299 10-277 (330)
63 3dwl_C Actin-related protein 2 100.0 7.8E-33 2.7E-37 238.7 22.0 221 26-257 23-280 (377)
64 4ggc_A P55CDC, cell division c 100.0 1.8E-31 6.2E-36 224.5 29.7 254 27-299 37-312 (318)
65 4h5i_A Guanine nucleotide-exch 100.0 1.9E-31 6.5E-36 229.6 29.4 266 25-299 25-340 (365)
66 3mkq_A Coatomer beta'-subunit; 100.0 1.1E-31 3.9E-36 253.4 30.3 257 25-298 24-298 (814)
67 1r5m_A SIR4-interacting protei 100.0 8.3E-32 2.8E-36 235.1 27.0 266 26-300 57-361 (425)
68 3v7d_B Cell division control p 100.0 4.2E-31 1.4E-35 234.3 31.8 242 27-290 174-449 (464)
69 3dwl_C Actin-related protein 2 100.0 9.2E-33 3.2E-37 238.3 19.3 228 71-299 16-278 (377)
70 3bg1_A Protein SEC13 homolog; 100.0 8.4E-33 2.9E-37 233.4 18.2 223 26-258 25-293 (316)
71 3sfz_A APAF-1, apoptotic pepti 100.0 2.3E-31 7.7E-36 262.0 29.7 257 25-299 626-910 (1249)
72 3dm0_A Maltose-binding peripla 100.0 5.8E-31 2E-35 244.7 30.5 231 63-299 377-629 (694)
73 4aow_A Guanine nucleotide-bind 100.0 4.6E-31 1.6E-35 224.1 27.2 223 25-260 97-339 (340)
74 3mmy_A MRNA export factor; mRN 100.0 4.3E-31 1.5E-35 226.3 24.7 246 26-291 54-334 (368)
75 1yfq_A Cell cycle arrest prote 100.0 3.1E-31 1.1E-35 225.4 23.2 244 26-291 23-311 (342)
76 4h5i_A Guanine nucleotide-exch 100.0 1.6E-31 5.6E-36 229.9 21.0 228 27-259 95-344 (365)
77 3f3f_A Nucleoporin SEH1; struc 100.0 1.8E-30 6.2E-35 220.3 26.7 245 63-307 6-344 (351)
78 3i2n_A WD repeat-containing pr 100.0 1.3E-30 4.6E-35 222.6 25.2 231 65-299 15-288 (357)
79 3sfz_A APAF-1, apoptotic pepti 100.0 9E-32 3.1E-36 264.8 20.2 255 25-300 972-1247(1249)
80 4gga_A P55CDC, cell division c 100.0 3E-30 1E-34 226.1 26.8 236 25-276 158-409 (420)
81 4a11_B DNA excision repair pro 100.0 1E-29 3.5E-34 220.8 29.3 268 25-299 55-362 (408)
82 3jrp_A Fusion protein of prote 100.0 8.5E-30 2.9E-34 219.2 27.7 239 62-300 5-287 (379)
83 4gq1_A NUP37; propeller, trans 100.0 1.2E-30 4.1E-35 226.8 21.8 221 71-296 94-383 (393)
84 1k8k_C P40, ARP2/3 complex 41 100.0 6E-30 2.1E-34 219.9 25.9 225 71-300 13-274 (372)
85 3lrv_A PRE-mRNA-splicing facto 100.0 7.2E-30 2.5E-34 217.8 24.5 243 25-290 47-320 (343)
86 3dw8_B Serine/threonine-protei 100.0 7E-30 2.4E-34 224.9 25.0 228 66-300 26-371 (447)
87 3f3f_A Nucleoporin SEH1; struc 100.0 5.9E-30 2E-34 217.2 23.0 235 26-270 23-348 (351)
88 4aez_A CDC20, WD repeat-contai 100.0 1.5E-29 5E-34 220.4 25.7 221 25-260 145-382 (401)
89 1sq9_A Antiviral protein SKI8; 100.0 1.9E-29 6.4E-34 218.8 24.4 229 63-299 11-319 (397)
90 3mkq_A Coatomer beta'-subunit; 100.0 4.7E-29 1.6E-33 235.5 28.5 231 63-299 8-256 (814)
91 3ei3_B DNA damage-binding prot 100.0 8.2E-29 2.8E-33 214.2 27.7 194 63-259 68-283 (383)
92 1l0q_A Surface layer protein; 100.0 3.5E-28 1.2E-32 210.6 31.7 252 27-299 3-272 (391)
93 3k26_A Polycomb protein EED; W 100.0 2.4E-29 8.1E-34 215.4 23.7 234 65-299 15-315 (366)
94 2j04_B YDR362CP, TAU91; beta p 100.0 4.9E-30 1.7E-34 229.8 19.6 220 75-299 170-425 (524)
95 1yfq_A Cell cycle arrest prote 100.0 4.7E-29 1.6E-33 211.9 24.7 231 66-299 9-279 (342)
96 3zwl_B Eukaryotic translation 100.0 3.1E-28 1.1E-32 208.5 29.6 221 63-291 27-278 (369)
97 1pgu_A Actin interacting prote 100.0 1E-28 3.6E-33 225.7 27.8 256 26-299 219-569 (615)
98 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.4E-28 1.9E-32 213.7 30.3 233 66-301 100-392 (450)
99 1pgu_A Actin interacting prote 100.0 2.6E-28 8.8E-33 223.1 28.7 256 26-299 30-325 (615)
100 3mmy_A MRNA export factor; mRN 100.0 1.5E-28 5.1E-33 210.5 24.6 234 63-299 34-301 (368)
101 3odt_A Protein DOA1; ubiquitin 100.0 4.6E-28 1.6E-32 203.0 27.0 226 62-299 12-252 (313)
102 3jrp_A Fusion protein of prote 100.0 4.3E-29 1.5E-33 214.8 21.0 223 26-258 23-287 (379)
103 2j04_A TAU60, YPL007P, hypothe 100.0 2E-28 6.8E-33 216.0 25.5 238 25-298 26-295 (588)
104 2xyi_A Probable histone-bindin 100.0 2.4E-28 8.2E-33 214.7 26.2 238 65-302 125-410 (430)
105 4ggc_A P55CDC, cell division c 100.0 4E-28 1.4E-32 204.0 26.4 223 25-259 78-316 (318)
106 2aq5_A Coronin-1A; WD40 repeat 100.0 1.2E-27 4.3E-32 208.2 30.1 229 71-302 39-301 (402)
107 3gre_A Serine/threonine-protei 100.0 7E-29 2.4E-33 218.3 22.2 229 65-299 60-356 (437)
108 1p22_A F-BOX/WD-repeat protein 100.0 9.8E-28 3.3E-32 211.1 29.2 217 71-299 136-362 (435)
109 3lrv_A PRE-mRNA-splicing facto 100.0 2.1E-28 7.1E-33 208.8 23.0 215 73-298 43-290 (343)
110 2w18_A PALB2, fancn, partner a 100.0 3.3E-28 1.1E-32 202.3 23.3 250 6-257 21-356 (356)
111 2xyi_A Probable histone-bindin 100.0 8.9E-28 3E-32 211.1 26.6 231 26-258 141-410 (430)
112 4a11_B DNA excision repair pro 100.0 4.3E-28 1.5E-32 210.5 24.0 221 25-259 111-366 (408)
113 4e54_B DNA damage-binding prot 100.0 2.5E-28 8.5E-33 215.0 22.5 219 66-290 117-362 (435)
114 2oaj_A Protein SNI1; WD40 repe 100.0 4.7E-28 1.6E-32 230.4 25.9 275 27-307 365-790 (902)
115 3jro_A Fusion protein of prote 100.0 2.6E-28 8.8E-33 228.7 23.0 238 63-300 4-283 (753)
116 2j04_A TAU60, YPL007P, hypothe 100.0 9.5E-28 3.3E-32 211.7 24.9 212 71-291 90-349 (588)
117 4gq1_A NUP37; propeller, trans 100.0 1.3E-28 4.3E-33 214.0 18.5 222 26-257 101-388 (393)
118 3bws_A Protein LP49; two-domai 100.0 1E-26 3.4E-31 204.1 28.7 261 25-300 133-430 (433)
119 3vu4_A KMHSV2; beta-propeller 100.0 3.7E-27 1.3E-31 202.0 24.5 221 64-299 15-268 (355)
120 3vu4_A KMHSV2; beta-propeller 100.0 1.1E-26 3.7E-31 199.1 27.0 241 26-291 31-324 (355)
121 3jro_A Fusion protein of prote 100.0 6.2E-28 2.1E-32 226.1 18.8 223 26-258 21-285 (753)
122 2oaj_A Protein SNI1; WD40 repe 100.0 4.5E-27 1.5E-31 223.7 24.9 188 66-259 15-243 (902)
123 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.2E-26 7.5E-31 203.4 26.2 223 71-299 9-336 (450)
124 3bws_A Protein LP49; two-domai 99.9 1E-25 3.4E-30 197.7 25.6 215 71-291 127-363 (433)
125 1l0q_A Surface layer protein; 99.9 1.3E-24 4.6E-29 188.1 28.4 227 27-274 45-287 (391)
126 2w18_A PALB2, fancn, partner a 99.9 2.1E-24 7.3E-29 179.5 25.7 168 127-299 155-354 (356)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.3E-23 4.5E-28 183.6 27.0 256 26-301 75-386 (415)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 1E-23 3.6E-28 184.3 25.9 236 26-284 143-409 (415)
129 1nir_A Nitrite reductase; hemo 99.9 1.3E-22 4.5E-27 182.8 25.9 262 26-302 149-460 (543)
130 2ojh_A Uncharacterized protein 99.9 9.6E-23 3.3E-27 168.8 20.4 242 31-291 17-290 (297)
131 1nir_A Nitrite reductase; hemo 99.9 6.8E-22 2.3E-26 178.2 26.9 249 25-290 189-496 (543)
132 1pby_B Quinohemoprotein amine 99.9 8E-22 2.7E-26 166.7 24.6 251 27-299 2-307 (337)
133 3u4y_A Uncharacterized protein 99.9 2E-21 6.8E-26 164.3 26.4 264 24-304 8-306 (331)
134 3vgz_A Uncharacterized protein 99.9 1.2E-20 4.3E-25 160.6 28.7 238 35-291 68-332 (353)
135 1ri6_A Putative isomerase YBHE 99.9 4.9E-21 1.7E-25 162.2 24.8 253 27-291 6-295 (343)
136 2ecf_A Dipeptidyl peptidase IV 99.9 6.6E-20 2.3E-24 171.5 25.5 267 25-300 47-413 (741)
137 2oit_A Nucleoporin 214KDA; NH2 99.9 1.4E-19 4.7E-24 158.9 25.4 188 71-259 41-279 (434)
138 1jmx_B Amine dehydrogenase; ox 99.9 1.9E-19 6.4E-24 152.9 23.1 231 23-271 8-334 (349)
139 2z3z_A Dipeptidyl aminopeptida 99.8 7.5E-19 2.6E-23 163.5 28.3 246 34-300 99-433 (706)
140 2z3z_A Dipeptidyl aminopeptida 99.8 8.5E-20 2.9E-24 169.9 21.5 266 26-300 35-389 (706)
141 1xfd_A DIP, dipeptidyl aminope 99.8 2E-19 6.8E-24 167.8 24.0 258 26-300 28-393 (723)
142 3u4y_A Uncharacterized protein 99.8 1.9E-18 6.3E-23 146.0 27.6 220 73-300 4-250 (331)
143 2ecf_A Dipeptidyl peptidase IV 99.8 2.2E-18 7.7E-23 161.1 29.4 257 26-300 120-457 (741)
144 3vgz_A Uncharacterized protein 99.8 6E-18 2E-22 143.9 29.1 222 71-300 45-301 (353)
145 2ojh_A Uncharacterized protein 99.8 1.8E-18 6.2E-23 143.0 23.9 204 81-291 16-235 (297)
146 1k32_A Tricorn protease; prote 99.8 6E-19 2E-23 170.9 23.9 242 27-291 215-490 (1045)
147 3hfq_A Uncharacterized protein 99.8 3.8E-18 1.3E-22 145.2 25.0 220 71-291 44-304 (347)
148 1ri6_A Putative isomerase YBHE 99.8 9.8E-18 3.3E-22 141.8 26.4 248 26-285 49-335 (343)
149 2oit_A Nucleoporin 214KDA; NH2 99.8 1.8E-18 6.3E-23 151.7 21.8 185 71-257 97-332 (434)
150 1xfd_A DIP, dipeptidyl aminope 99.8 6.2E-18 2.1E-22 157.7 25.4 252 26-291 72-428 (723)
151 3o4h_A Acylamino-acid-releasin 99.8 2E-18 6.8E-23 157.2 20.4 245 26-301 33-314 (582)
152 1pby_B Quinohemoprotein amine 99.8 7.8E-18 2.7E-22 142.1 21.2 227 27-271 47-319 (337)
153 1jmx_B Amine dehydrogenase; ox 99.8 8.6E-18 2.9E-22 142.6 21.6 219 72-300 5-323 (349)
154 1k32_A Tricorn protease; prote 99.8 7.6E-18 2.6E-22 163.2 21.2 227 65-301 200-460 (1045)
155 3o4h_A Acylamino-acid-releasin 99.8 7.9E-18 2.7E-22 153.3 19.9 210 71-291 26-264 (582)
156 3scy_A Hypothetical bacterial 99.8 2E-16 6.7E-21 135.4 27.2 225 71-299 54-336 (361)
157 1z68_A Fibroblast activation p 99.8 1.9E-17 6.3E-22 154.5 17.1 252 28-300 28-391 (719)
158 1z68_A Fibroblast activation p 99.8 1.4E-17 4.8E-22 155.3 16.2 219 71-299 20-343 (719)
159 3hfq_A Uncharacterized protein 99.7 2.1E-15 7.2E-20 128.2 26.2 209 83-291 12-258 (347)
160 4a5s_A Dipeptidyl peptidase 4 99.7 1.3E-15 4.4E-20 142.5 24.3 258 27-301 29-399 (740)
161 3pe7_A Oligogalacturonate lyas 99.7 1.9E-15 6.5E-20 130.3 23.4 257 26-302 47-384 (388)
162 4a5s_A Dipeptidyl peptidase 4 99.7 3.9E-16 1.3E-20 146.0 20.4 224 71-300 21-351 (740)
163 3scy_A Hypothetical bacterial 99.7 3.3E-14 1.1E-18 121.5 30.2 222 26-258 61-337 (361)
164 1jof_A Carboxy-CIS,CIS-muconat 99.7 7.3E-15 2.5E-19 125.9 24.1 215 71-291 44-328 (365)
165 3fvz_A Peptidyl-glycine alpha- 99.7 1.2E-13 4.2E-18 116.6 27.4 223 71-298 28-318 (329)
166 2oiz_A Aromatic amine dehydrog 99.7 5.4E-14 1.9E-18 120.4 23.6 232 34-285 29-360 (361)
167 1q7f_A NHL, brain tumor CG1071 99.6 2.1E-13 7.2E-18 112.6 25.7 223 26-259 41-281 (286)
168 3fvz_A Peptidyl-glycine alpha- 99.6 8.4E-14 2.9E-18 117.6 23.3 187 71-259 95-323 (329)
169 1q7f_A NHL, brain tumor CG1071 99.6 4E-13 1.4E-17 110.9 26.9 220 71-299 34-277 (286)
170 1jof_A Carboxy-CIS,CIS-muconat 99.6 2.3E-14 8E-19 122.8 19.3 223 26-259 51-342 (365)
171 3azo_A Aminopeptidase; POP fam 99.6 2.7E-13 9.2E-18 125.2 26.7 264 27-299 36-366 (662)
172 2bkl_A Prolyl endopeptidase; m 99.6 1.8E-13 6.2E-18 127.1 25.3 224 71-299 125-394 (695)
173 3c5m_A Oligogalacturonate lyas 99.6 1.1E-13 3.8E-18 119.3 21.8 222 71-301 85-383 (396)
174 3pe7_A Oligogalacturonate lyas 99.6 1.5E-13 5.2E-18 118.3 22.0 225 72-300 41-327 (388)
175 3no2_A Uncharacterized protein 99.6 1.2E-13 4.1E-18 113.7 19.7 207 23-245 2-230 (276)
176 2xdw_A Prolyl endopeptidase; a 99.6 6.5E-13 2.2E-17 123.7 26.6 223 71-299 129-411 (710)
177 3azo_A Aminopeptidase; POP fam 99.6 3.1E-13 1.1E-17 124.7 23.9 187 71-259 134-370 (662)
178 2gop_A Trilobed protease; beta 99.6 6E-13 2.1E-17 112.8 23.5 231 35-299 42-330 (347)
179 3no2_A Uncharacterized protein 99.6 1.2E-12 4E-17 107.8 23.7 203 79-291 6-231 (276)
180 2dg1_A DRP35, lactonase; beta 99.6 1E-12 3.5E-17 110.8 23.1 213 71-291 49-298 (333)
181 3dsm_A Uncharacterized protein 99.6 1.4E-11 5E-16 103.8 29.7 255 34-301 15-301 (328)
182 3dsm_A Uncharacterized protein 99.6 1.2E-12 3.9E-17 110.6 22.5 225 25-270 53-309 (328)
183 3e5z_A Putative gluconolactona 99.6 2E-12 6.9E-17 107.3 23.2 217 71-299 32-283 (296)
184 3c5m_A Oligogalacturonate lyas 99.5 4.5E-13 1.5E-17 115.5 19.0 225 25-257 91-381 (396)
185 1qks_A Cytochrome CD1 nitrite 99.5 2.9E-11 9.7E-16 109.1 29.3 251 26-291 167-458 (567)
186 2z2n_A Virginiamycin B lyase; 99.5 1.3E-10 4.4E-15 96.0 30.0 251 26-296 26-289 (299)
187 1rwi_B Serine/threonine-protei 99.5 3.6E-11 1.2E-15 98.1 25.5 222 71-299 28-261 (270)
188 1rwi_B Serine/threonine-protei 99.5 1.6E-11 5.4E-16 100.2 22.8 220 26-259 35-265 (270)
189 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 5.7E-11 1.9E-15 99.1 26.2 222 71-299 22-296 (314)
190 2oiz_A Aromatic amine dehydrog 99.5 2.7E-11 9.1E-16 103.6 23.9 208 84-301 28-335 (361)
191 1yr2_A Prolyl oligopeptidase; 99.5 2.4E-11 8.2E-16 113.7 25.6 224 71-300 167-439 (741)
192 2dg1_A DRP35, lactonase; beta 99.5 2.8E-11 9.4E-16 102.0 22.5 223 71-299 10-260 (333)
193 3e5z_A Putative gluconolactona 99.4 5.6E-11 1.9E-15 98.5 23.5 212 27-258 41-286 (296)
194 2bkl_A Prolyl endopeptidase; m 99.4 1.1E-11 3.8E-16 115.1 20.0 221 26-260 132-399 (695)
195 2xdw_A Prolyl endopeptidase; a 99.4 3.5E-11 1.2E-15 112.1 22.8 223 26-260 136-416 (710)
196 2z2n_A Virginiamycin B lyase; 99.4 1.2E-09 3.9E-14 90.2 28.7 227 71-305 19-258 (299)
197 2qc5_A Streptogramin B lactona 99.4 1.8E-09 6E-14 89.2 29.2 251 26-297 31-295 (300)
198 2gop_A Trilobed protease; beta 99.3 6.7E-10 2.3E-14 93.9 23.7 192 85-299 41-290 (347)
199 1xip_A Nucleoporin NUP159; bet 99.3 1.3E-10 4.3E-15 99.4 18.0 171 110-291 39-232 (388)
200 1qks_A Cytochrome CD1 nitrite 99.3 3.9E-09 1.3E-13 95.2 28.3 180 76-259 165-374 (567)
201 3g4e_A Regucalcin; six bladed 99.3 4.7E-09 1.6E-13 87.0 26.7 211 71-290 17-259 (297)
202 3q7m_A Lipoprotein YFGL, BAMB; 99.3 1.1E-09 3.6E-14 94.0 23.4 228 26-271 103-346 (376)
203 2mad_H Methylamine dehydrogena 99.3 1.1E-08 3.8E-13 87.6 29.3 240 37-299 48-347 (373)
204 2qc5_A Streptogramin B lactona 99.3 1.4E-08 4.8E-13 83.7 28.7 226 71-304 24-262 (300)
205 3sjl_D Methylamine dehydrogena 99.3 7.4E-10 2.5E-14 94.3 21.1 261 23-304 42-367 (386)
206 3q7m_A Lipoprotein YFGL, BAMB; 99.3 6.4E-09 2.2E-13 89.1 26.4 224 26-260 53-298 (376)
207 2ghs_A AGR_C_1268P; regucalcin 99.3 1.2E-08 4.3E-13 85.7 27.2 207 71-290 53-289 (326)
208 2hz6_A Endoplasmic reticulum t 99.2 6.2E-12 2.1E-16 107.8 6.1 192 25-233 8-206 (369)
209 3iuj_A Prolyl endopeptidase; h 99.2 3.2E-09 1.1E-13 98.5 24.1 219 71-299 133-402 (693)
210 1xip_A Nucleoporin NUP159; bet 99.2 5E-10 1.7E-14 95.7 17.0 163 71-244 42-230 (388)
211 2hz6_A Endoplasmic reticulum t 99.2 3E-12 1E-16 109.8 2.8 197 77-285 8-216 (369)
212 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 6.3E-09 2.2E-13 86.6 22.2 221 26-259 29-300 (314)
213 3hrp_A Uncharacterized protein 99.2 2.1E-08 7.1E-13 87.0 25.8 209 71-289 135-396 (409)
214 1yiq_A Quinohemoprotein alcoho 99.2 8.2E-09 2.8E-13 95.5 24.4 252 26-289 121-534 (689)
215 1yr2_A Prolyl oligopeptidase; 99.2 3.1E-09 1.1E-13 99.4 20.4 222 26-260 174-443 (741)
216 1kb0_A Quinohemoprotein alcoho 99.1 3E-08 1E-12 91.6 25.5 252 26-289 128-536 (677)
217 3hrp_A Uncharacterized protein 99.1 3.3E-08 1.1E-12 85.8 23.4 217 26-256 142-408 (409)
218 3g4e_A Regucalcin; six bladed 99.1 5.1E-08 1.7E-12 80.8 23.2 199 24-240 23-252 (297)
219 3c75_H MADH, methylamine dehyd 99.1 1E-08 3.5E-13 88.8 18.8 256 23-299 82-399 (426)
220 3hxj_A Pyrrolo-quinoline quino 99.1 1.2E-08 4.3E-13 85.4 19.0 246 25-299 29-281 (330)
221 3dr2_A Exported gluconolactona 99.1 2.9E-08 9.8E-13 82.6 20.7 215 71-298 49-302 (305)
222 1yiq_A Quinohemoprotein alcoho 99.1 9.6E-08 3.3E-12 88.4 25.9 190 26-223 70-342 (689)
223 3sjl_D Methylamine dehydrogena 99.1 6.7E-08 2.3E-12 82.3 22.6 211 73-290 39-297 (386)
224 2mad_H Methylamine dehydrogena 99.0 4.4E-07 1.5E-11 77.6 27.3 216 34-268 95-356 (373)
225 3iuj_A Prolyl endopeptidase; h 99.0 2.1E-08 7.3E-13 93.0 19.7 222 26-260 140-407 (693)
226 1kb0_A Quinohemoprotein alcoho 99.0 2.6E-07 9E-12 85.3 26.7 190 26-223 77-350 (677)
227 2ece_A 462AA long hypothetical 99.0 9.9E-07 3.4E-11 76.0 26.6 217 73-291 88-399 (462)
228 2iwa_A Glutamine cyclotransfer 99.0 1.5E-07 5.1E-12 76.0 20.5 186 71-259 25-238 (266)
229 3hxj_A Pyrrolo-quinoline quino 99.0 6.7E-08 2.3E-12 80.9 18.9 210 77-299 107-321 (330)
230 3dr2_A Exported gluconolactona 99.0 1.4E-07 4.8E-12 78.4 20.3 204 26-249 57-298 (305)
231 2ghs_A AGR_C_1268P; regucalcin 98.9 4.8E-07 1.6E-11 75.9 23.3 197 24-240 59-282 (326)
232 2iwa_A Glutamine cyclotransfer 98.9 1.9E-06 6.6E-11 69.5 24.4 180 112-297 24-232 (266)
233 2qe8_A Uncharacterized protein 98.9 1.4E-07 4.8E-12 79.8 18.6 217 71-291 21-309 (343)
234 3nol_A Glutamine cyclotransfer 98.9 1.2E-06 4.1E-11 70.1 21.7 173 112-291 46-243 (262)
235 1mda_H Methylamine dehydrogena 98.9 8.3E-08 2.8E-12 81.7 15.3 238 24-280 30-364 (368)
236 1fwx_A Nitrous oxide reductase 98.8 2.2E-07 7.4E-12 82.8 17.9 214 76-291 99-406 (595)
237 3nok_A Glutaminyl cyclase; bet 98.8 1E-06 3.4E-11 70.5 19.2 172 112-291 58-253 (268)
238 3nol_A Glutamine cyclotransfer 98.8 7.7E-07 2.6E-11 71.2 18.2 170 71-247 47-245 (262)
239 3c75_H MADH, methylamine dehyd 98.8 2.4E-06 8E-11 74.0 22.0 179 76-259 82-296 (426)
240 3nok_A Glutaminyl cyclase; bet 98.8 1.6E-06 5.4E-11 69.4 18.8 169 71-247 59-255 (268)
241 2ece_A 462AA long hypothetical 98.8 1.8E-06 6.3E-11 74.3 20.5 218 24-246 94-399 (462)
242 3mbr_X Glutamine cyclotransfer 98.8 1E-05 3.5E-10 64.1 23.2 174 111-291 23-222 (243)
243 1kv9_A Type II quinohemoprotei 98.7 5.7E-06 1.9E-10 76.3 24.8 251 26-288 117-516 (668)
244 3mbr_X Glutamine cyclotransfer 98.7 2.8E-06 9.7E-11 67.3 19.4 172 71-247 25-224 (243)
245 1kv9_A Type II quinohemoprotei 98.7 6.9E-06 2.4E-10 75.7 24.1 190 26-223 66-337 (668)
246 2ad6_A Methanol dehydrogenase 98.7 1.7E-05 5.7E-10 71.8 26.1 156 129-291 272-525 (571)
247 1mda_H Methylamine dehydrogena 98.7 2.2E-06 7.6E-11 72.9 17.9 90 88-181 47-158 (368)
248 2qe8_A Uncharacterized protein 98.7 7.3E-06 2.5E-10 69.2 21.1 180 71-251 71-314 (343)
249 1w6s_A Methanol dehydrogenase 98.6 6.5E-05 2.2E-09 68.1 27.0 153 129-288 278-531 (599)
250 1flg_A Protein (quinoprotein e 98.6 9.6E-05 3.3E-09 66.9 27.6 154 129-289 291-545 (582)
251 1npe_A Nidogen, entactin; glyc 98.6 0.00015 5.1E-09 58.6 27.9 208 71-285 40-263 (267)
252 1npe_A Nidogen, entactin; glyc 98.5 9.2E-05 3.2E-09 59.9 23.6 203 24-240 46-261 (267)
253 4a2l_A BT_4663, two-component 98.5 0.0008 2.7E-08 63.4 32.4 218 71-298 314-567 (795)
254 2ad6_A Methanol dehydrogenase 98.5 0.00026 8.8E-09 64.0 27.2 190 26-223 62-339 (571)
255 1k3i_A Galactose oxidase precu 98.4 1.2E-05 4.2E-10 74.0 18.0 217 71-291 247-529 (656)
256 1w6s_A Methanol dehydrogenase 98.4 0.00061 2.1E-08 61.8 27.9 197 26-223 62-346 (599)
257 2p4o_A Hypothetical protein; p 98.4 0.0005 1.7E-08 56.8 25.5 213 71-291 36-276 (306)
258 2fp8_A Strictosidine synthase; 98.4 0.00032 1.1E-08 58.3 24.4 211 71-290 23-300 (322)
259 4a2l_A BT_4663, two-component 98.3 0.002 6.8E-08 60.6 32.6 213 71-292 361-605 (795)
260 2xe4_A Oligopeptidase B; hydro 98.2 0.00095 3.2E-08 62.4 26.0 183 71-256 178-398 (751)
261 3v9f_A Two-component system se 98.2 0.0039 1.3E-07 58.6 29.6 215 71-292 317-558 (781)
262 1flg_A Protein (quinoprotein e 98.2 0.00084 2.9E-08 60.8 23.9 145 78-223 117-359 (582)
263 3v9f_A Two-component system se 98.2 0.0038 1.3E-07 58.6 28.7 215 71-291 367-601 (781)
264 1fwx_A Nitrous oxide reductase 98.1 0.00024 8.2E-09 63.5 18.3 170 119-291 100-348 (595)
265 3v65_B Low-density lipoprotein 98.0 0.005 1.7E-07 52.7 26.8 187 71-259 120-319 (386)
266 2fp8_A Strictosidine synthase; 98.0 0.005 1.7E-07 51.0 23.2 173 111-290 21-246 (322)
267 1k3i_A Galactose oxidase precu 97.9 0.00091 3.1E-08 61.5 19.2 217 71-291 190-474 (656)
268 2xe4_A Oligopeptidase B; hydro 97.8 0.0034 1.2E-07 58.7 21.4 182 111-299 176-397 (751)
269 3v64_C Agrin; beta propeller, 97.8 0.012 4.1E-07 49.5 26.8 187 71-259 77-276 (349)
270 3sov_A LRP-6, low-density lipo 97.7 0.015 5.2E-07 48.2 28.4 215 34-259 11-239 (318)
271 1ijq_A LDL receptor, low-densi 97.6 0.022 7.7E-07 47.1 29.5 187 71-259 34-239 (316)
272 1n7d_A LDL receptor, low-densi 97.5 0.0031 1E-07 58.4 16.1 186 71-259 410-615 (699)
273 3tc9_A Hypothetical hydrolase; 97.4 0.049 1.7E-06 47.2 21.5 184 71-257 183-429 (430)
274 3qqz_A Putative uncharacterize 97.4 0.032 1.1E-06 44.6 21.8 185 71-256 31-251 (255)
275 3v65_B Low-density lipoprotein 97.4 0.048 1.6E-06 46.5 24.6 173 84-259 93-278 (386)
276 2vpj_A Kelch-like protein 12; 97.4 0.037 1.3E-06 45.1 23.3 183 75-260 60-280 (301)
277 2p4o_A Hypothetical protein; p 97.3 0.046 1.6E-06 44.8 24.2 184 111-299 34-239 (306)
278 3ii7_A Kelch-like protein 7; p 97.3 0.047 1.6E-06 44.7 23.3 227 27-269 13-281 (306)
279 3p5b_L Low density lipoprotein 97.3 0.063 2.2E-06 46.0 30.5 188 71-259 116-321 (400)
280 2xn4_A Kelch-like protein 2; s 97.2 0.058 2E-06 44.0 20.8 181 77-260 61-278 (302)
281 4hw6_A Hypothetical protein, I 97.2 0.097 3.3E-06 45.4 22.8 184 71-257 186-432 (433)
282 3amr_A 3-phytase; beta-propell 97.1 0.093 3.2E-06 43.8 21.6 195 71-270 30-272 (355)
283 1ijq_A LDL receptor, low-densi 97.1 0.097 3.3E-06 43.2 27.3 173 85-259 8-196 (316)
284 4asc_A Kelch repeat and BTB do 97.0 0.098 3.4E-06 43.0 19.2 213 36-260 13-279 (315)
285 2xzh_A Clathrin heavy chain 1; 97.0 0.1 3.5E-06 43.0 27.8 199 71-278 71-306 (365)
286 4a0p_A LRP6, LRP-6, low-densit 97.0 0.19 6.5E-06 45.8 30.5 216 33-260 12-239 (628)
287 3sre_A PON1, serum paraoxonase 97.0 0.13 4.3E-06 43.3 22.0 231 71-306 54-353 (355)
288 3ii7_A Kelch-like protein 7; p 97.0 0.11 3.7E-06 42.4 19.9 184 81-269 16-234 (306)
289 2xzh_A Clathrin heavy chain 1; 97.0 0.12 4E-06 42.7 17.4 138 127-274 47-200 (365)
290 3sov_A LRP-6, low-density lipo 96.9 0.13 4.4E-06 42.6 25.8 175 85-259 11-198 (318)
291 3qqz_A Putative uncharacterize 96.9 0.11 3.8E-06 41.4 25.3 188 109-301 27-252 (255)
292 3m0c_C LDL receptor, low-densi 96.8 0.32 1.1E-05 45.6 30.2 188 71-259 428-633 (791)
293 2xbg_A YCF48-like protein; pho 96.8 0.17 5.7E-06 42.0 25.6 222 71-299 84-319 (327)
294 3v64_C Agrin; beta propeller, 96.8 0.19 6.5E-06 42.1 27.1 172 85-259 51-235 (349)
295 3tc9_A Hypothetical hydrolase; 96.8 0.16 5.4E-06 44.0 18.1 145 111-258 139-301 (430)
296 3s94_A LRP-6, low-density lipo 96.7 0.34 1.2E-05 44.1 24.2 189 71-260 44-245 (619)
297 4hw6_A Hypothetical protein, I 96.7 0.26 8.8E-06 42.7 24.3 182 71-256 143-372 (433)
298 3p5b_L Low density lipoprotein 96.7 0.25 8.7E-06 42.2 27.1 177 81-259 86-278 (400)
299 1zgk_A Kelch-like ECH-associat 96.6 0.21 7.1E-06 40.8 18.2 182 75-260 22-242 (308)
300 1n7d_A LDL receptor, low-densi 96.6 0.018 6.3E-07 53.2 11.4 173 85-259 384-572 (699)
301 3ei3_A DNA damage-binding prot 96.5 0.76 2.6E-05 45.1 24.5 167 129-299 807-996 (1158)
302 1bpo_A Protein (clathrin); cla 96.3 0.44 1.5E-05 41.0 28.4 199 71-278 70-305 (494)
303 1zgk_A Kelch-like ECH-associat 96.3 0.34 1.2E-05 39.6 22.5 181 77-260 70-289 (308)
304 2vpj_A Kelch-like protein 12; 96.3 0.35 1.2E-05 39.2 20.3 171 87-260 31-233 (301)
305 3m0c_C LDL receptor, low-densi 96.2 0.87 3E-05 42.7 27.5 173 85-259 402-590 (791)
306 2woz_A Kelch repeat and BTB do 96.2 0.43 1.5E-05 39.1 20.0 184 74-260 53-289 (318)
307 3amr_A 3-phytase; beta-propell 96.1 0.49 1.7E-05 39.5 22.7 171 123-299 44-262 (355)
308 2be1_A Serine/threonine-protei 96.0 0.053 1.8E-06 45.2 10.0 186 27-224 11-236 (339)
309 1xi4_A Clathrin heavy chain; a 95.8 0.96 3.3E-05 44.9 18.8 185 71-260 70-291 (1630)
310 2xbg_A YCF48-like protein; pho 95.6 0.8 2.7E-05 37.8 24.6 220 71-299 40-276 (327)
311 3pbp_A Nucleoporin NUP82; beta 95.5 1.1 3.7E-05 38.5 18.4 100 159-259 29-159 (452)
312 2xn4_A Kelch-like protein 2; s 95.4 0.84 2.9E-05 36.9 19.8 139 119-260 61-231 (302)
313 4asc_A Kelch repeat and BTB do 95.3 0.97 3.3E-05 36.9 19.0 176 81-260 9-223 (315)
314 2p9w_A MAL S 1 allergenic prot 95.2 1.1 3.6E-05 37.1 18.5 147 112-259 16-216 (334)
315 2uvk_A YJHT; unknown function, 95.1 1.2 4.1E-05 37.0 18.8 130 129-260 168-344 (357)
316 3kya_A Putative phosphatase; s 95.1 1.6 5.6E-05 38.3 18.7 146 111-258 141-341 (496)
317 2be1_A Serine/threonine-protei 95.1 0.095 3.3E-06 43.7 8.4 103 120-223 11-134 (339)
318 3kya_A Putative phosphatase; s 95.0 1.8 6E-05 38.1 22.9 187 71-259 190-476 (496)
319 2uvk_A YJHT; unknown function, 94.8 1.5 5E-05 36.5 23.8 117 172-291 168-324 (357)
320 2zwa_A Leucine carboxyl methyl 94.8 2.2 7.6E-05 39.3 17.7 145 77-223 451-639 (695)
321 3s94_A LRP-6, low-density lipo 94.8 2.3 8E-05 38.6 22.9 175 85-259 16-203 (619)
322 1tl2_A L10, protein (tachylect 94.7 0.25 8.6E-06 38.3 9.2 146 151-301 41-209 (236)
323 3pbp_A Nucleoporin NUP82; beta 94.2 2.4 8.1E-05 36.4 18.2 150 75-254 29-208 (452)
324 3ei3_A DNA damage-binding prot 94.2 4.6 0.00016 39.6 24.1 152 130-285 493-664 (1158)
325 4a0p_A LRP6, LRP-6, low-densit 94.1 3.3 0.00011 37.6 26.9 175 84-259 12-198 (628)
326 1tl2_A L10, protein (tachylect 94.1 1.4 4.9E-05 34.1 12.2 100 71-177 45-159 (236)
327 2p9w_A MAL S 1 allergenic prot 93.9 2.3 7.8E-05 35.1 21.2 148 71-220 17-216 (334)
328 3ott_A Two-component system se 93.9 4.1 0.00014 37.8 25.3 214 71-298 26-256 (758)
329 2ism_A Putative oxidoreductase 93.6 2.8 9.5E-05 34.9 20.0 215 71-290 35-332 (352)
330 1bpo_A Protein (clathrin); cla 92.6 4.6 0.00016 34.9 25.7 167 85-259 46-236 (494)
331 2woz_A Kelch repeat and BTB do 92.1 4.2 0.00014 33.0 18.6 176 81-260 20-233 (318)
332 3sre_A PON1, serum paraoxonase 91.6 5.3 0.00018 33.4 21.9 160 127-290 81-284 (355)
333 3qhy_B Beta-lactamase inhibito 90.7 5.6 0.00019 32.0 19.2 202 35-259 41-247 (282)
334 3qhy_B Beta-lactamase inhibito 88.9 7.9 0.00027 31.0 22.8 176 73-259 28-208 (282)
335 3ott_A Two-component system se 88.2 16 0.00055 33.8 25.4 179 71-259 67-261 (758)
336 2ism_A Putative oxidoreductase 87.3 12 0.0004 31.1 19.2 70 111-182 33-115 (352)
337 1xi4_A Clathrin heavy chain; a 86.7 3.8 0.00013 40.9 9.9 117 171-291 47-169 (1630)
338 2zwa_A Leucine carboxyl methyl 81.0 34 0.0012 31.4 19.0 184 76-260 396-637 (695)
339 3a9g_A Putative uncharacterize 79.0 26 0.0009 29.0 21.1 71 111-182 31-115 (354)
340 4gq2_M Nucleoporin NUP120; bet 78.3 4.7 0.00016 38.7 7.1 38 152-189 237-274 (950)
341 3sbq_A Nitrous-oxide reductase 76.4 15 0.0005 32.9 8.9 100 71-170 327-454 (638)
342 3sbq_A Nitrous-oxide reductase 75.4 26 0.00088 31.4 10.2 98 109-207 323-452 (638)
343 1cru_A Protein (soluble quinop 73.9 43 0.0015 28.9 17.7 35 150-184 26-60 (454)
344 3a9g_A Putative uncharacterize 73.7 37 0.0013 28.1 23.9 218 71-290 33-329 (354)
345 4fhn_B Nucleoporin NUP120; pro 70.6 4.9 0.00017 39.4 5.2 38 152-189 239-276 (1139)
346 3f7f_A Nucleoporin NUP120; nuc 68.5 10 0.00036 34.8 6.4 36 153-190 224-259 (729)
347 3s25_A Hypothetical 7-bladed b 67.6 47 0.0016 26.8 22.3 173 72-259 58-256 (302)
348 4hvt_A Ritya.17583.B, post-pro 67.4 78 0.0027 29.2 20.3 214 71-288 133-411 (711)
349 2g8s_A Glucose/sorbosone dehyd 64.2 60 0.002 26.7 15.0 71 111-181 20-107 (353)
350 3s25_A Hypothetical 7-bladed b 57.7 73 0.0025 25.6 19.5 145 128-289 36-200 (302)
351 3das_A Putative oxidoreductase 50.0 1.1E+02 0.0037 25.3 25.3 220 71-290 36-325 (347)
352 4gq2_M Nucleoporin NUP120; bet 49.0 25 0.00086 33.7 5.8 30 230-259 236-267 (950)
353 3das_A Putative oxidoreductase 44.9 1.3E+02 0.0045 24.8 17.7 141 149-289 30-218 (347)
354 3f7f_A Nucleoporin NUP120; nuc 38.6 40 0.0014 31.1 5.1 28 231-259 223-251 (729)
355 2g8s_A Glucose/sorbosone dehyd 36.8 1.7E+02 0.0059 23.9 23.8 68 230-298 271-350 (353)
356 4fhn_B Nucleoporin NUP120; pro 32.7 30 0.001 33.9 3.6 29 231-259 239-269 (1139)
357 3kci_A Probable E3 ubiquitin-p 29.8 2.4E+02 0.0082 23.4 23.0 187 72-258 110-345 (389)
358 4a9v_A PHOX; hydrolase, beta-p 28.3 2.4E+02 0.0083 25.3 8.1 57 111-168 478-548 (592)
359 1cru_A Protein (soluble quinop 25.4 3.2E+02 0.011 23.4 19.1 58 111-168 29-97 (454)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.3e-41 Score=283.79 Aligned_cols=259 Identities=13% Similarity=0.171 Sum_probs=221.4
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcc
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSN 101 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~ 101 (308)
.+.+|+||+.|++|++|+..... ......+.+|... +++++|++.. ++++.|++|++||+.+++.+.
T Consensus 47 ~~~~l~tgs~D~~v~vW~~~~~~----------~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~ 116 (321)
T 3ow8_A 47 NSETVVTGSLDDLVKVWKWRDER----------LDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIK 116 (321)
T ss_dssp --CEEEEEETTSCEEEEEEETTE----------EEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred CCCEEEEEcCCCCEEEEECCCCC----------eeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEE
Confidence 35689999999999999976540 1112235688777 8999999999 999999999999998876542
Q ss_pred cccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCC
Q 021744 102 INNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCA 180 (308)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~ 180 (308)
....+...+..+.|+|++.. ++++.|+.|++|+++++ +....+..|...|.+++|+|++++|++++.|+.|++||++
T Consensus 117 -~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~-~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~ 194 (321)
T 3ow8_A 117 -SIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG-KKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA 194 (321)
T ss_dssp -EEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTC-SEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred -EEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCC-ceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 22334445788999999977 88999999999999998 6778888999999999999999999999999999999999
Q ss_pred CCeEEEEEe-CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCcee-eeeCCCCCEEEEEEeCC--EEEEEcCCCeEEE
Q 021744 181 SGQCAGVIN-LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILA 253 (308)
Q Consensus 181 ~~~~~~~~~-~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~i 253 (308)
+++.+..+. +..++.++ .|++++|++++ |+.|++||+++++.. .+.+|...|.+++|+|+ +|++++.|+.|++
T Consensus 195 ~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~i 274 (321)
T 3ow8_A 195 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKV 274 (321)
T ss_dssp TTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEE
Confidence 999999888 66777765 57899999887 999999999998877 78899999999999999 9999999999999
Q ss_pred EEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 254 WKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 254 wd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
||+.++ +++.++.+|...|.. +|+|++++|++++ +..|.++.
T Consensus 275 wd~~~~----~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 275 WDVGTR----TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp EETTTT----EEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred EeCCCC----EEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 999987 788899999999999 9999999998665 55565554
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.8e-40 Score=290.27 Aligned_cols=256 Identities=15% Similarity=0.243 Sum_probs=224.2
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCccc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNI 102 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~ 102 (308)
+.++++++.|++|++||..++ .....+.+|... +++|+|++.+ ++|+.|++|++||+.+++.+.
T Consensus 120 ~~~l~s~s~Dg~i~vwd~~~~------------~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~- 186 (410)
T 1vyh_C 120 FSVMVSASEDATIKVWDYETG------------DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIR- 186 (410)
T ss_dssp SSEEEEEESSSCEEEEETTTC------------CCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEE-
T ss_pred CCEEEEEeCCCeEEEEECCCC------------cEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE-
Confidence 578999999999999999877 223345678877 8999999999 999999999999998765442
Q ss_pred ccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCC
Q 021744 103 NNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCAS 181 (308)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~ 181 (308)
....|...+.++.|+|++.. ++|+.|+.|++||+.++ +.+..+.+|...|.+++++|++.++++|+.|++|++||+++
T Consensus 187 ~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~-~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~ 265 (410)
T 1vyh_C 187 TMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG-YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265 (410)
T ss_dssp CCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC-cEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 34567788999999999876 89999999999999999 78899999999999999999999999999999999999999
Q ss_pred CeEEEEEe-CCCeeEEEE--cC--------------------CCEEEEEc-CCcEEEEEcCCCcee-eeeCCCCCEEEEE
Q 021744 182 GQCAGVIN-LGGEVGCMI--SE--------------------GPWIFIGV-TNFVKAWNTQTNTDL-SLSGPVGQVYAMA 236 (308)
Q Consensus 182 ~~~~~~~~-~~~~v~~~~--~~--------------------~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~~~~v~~~~ 236 (308)
+++...+. +...+.++. ++ +.+|++|+ |+.|++||+++++++ .+.+|...|++++
T Consensus 266 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~ 345 (410)
T 1vyh_C 266 KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL 345 (410)
T ss_dssp CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred CceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEE
Confidence 99988887 777777763 32 56888776 999999999999887 7889999999999
Q ss_pred EeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 237 VGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 237 ~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
|+|+ +|++|+.|+.|++||+.++ +++..+.+|...|.+ +|+|++.+|++++ +..|.+|.
T Consensus 346 ~~~~g~~l~s~s~D~~i~vwd~~~~----~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 346 FHSGGKFILSCADDKTLRVWDYKNK----RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408 (410)
T ss_dssp ECSSSSCEEEEETTTEEEEECCTTS----CCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCC----ceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 9998 9999999999999999886 778889999999999 9999999998655 66666654
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.4e-40 Score=281.54 Aligned_cols=257 Identities=15% Similarity=0.210 Sum_probs=217.3
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCc-
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNS- 100 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~- 100 (308)
.+.++++++.|++|++||..++. ....+..|... +++|+|++.+ ++|+.|++|++|++.+.+..
T Consensus 66 d~~~l~s~s~Dg~v~iWd~~~~~------------~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~ 133 (340)
T 1got_B 66 DSRLLLSASQDGKLIIWDSYTTN------------KVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNV 133 (340)
T ss_dssp TSSEEEEEETTTEEEEEETTTCC------------EEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSC
T ss_pred CCCEEEEEeCCCcEEEEECCCCC------------cceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcc
Confidence 36789999999999999987761 11122345555 8999999999 99999999999999765421
Q ss_pred --ccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEe
Q 021744 101 --NINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWD 178 (308)
Q Consensus 101 --~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd 178 (308)
......|...+.++.|.+++.+++++.|+.|++||+.++ +.+..+.+|...|.+++|+|+++++++++.|++|++||
T Consensus 134 ~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd 212 (340)
T 1got_B 134 RVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETG-QQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWD 212 (340)
T ss_dssp EEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCC-cEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 123345667789999999998999999999999999999 78899999999999999999999999999999999999
Q ss_pred CCCCeEEEEEe-CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCceee-ee--CCCCCEEEEEEeCC--EEEEEcCCC
Q 021744 179 CASGQCAGVIN-LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDLS-LS--GPVGQVYAMAVGND--LLFAGTQDG 249 (308)
Q Consensus 179 ~~~~~~~~~~~-~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~~-~~--~~~~~v~~~~~~~~--~l~~g~~dg 249 (308)
+++++++..+. |...+.++ .|++++|++++ |++|++||+++++... +. .+...|.+++|+|+ +|++|+.|+
T Consensus 213 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~ 292 (340)
T 1got_B 213 VREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF 292 (340)
T ss_dssp TTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCC
Confidence 99999998887 77778766 47899999877 9999999999988763 32 23357999999999 999999999
Q ss_pred eEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee-ceEEEEe
Q 021744 250 AILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV-SFIMFIG 298 (308)
Q Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~ 298 (308)
.|++||+.+. +.+..+.+|...|.+ +|+|++.+|++++ +..|.+|
T Consensus 293 ~i~vwd~~~~----~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iW 339 (340)
T 1got_B 293 NCNVWDALKA----DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339 (340)
T ss_dssp EEEEEETTTC----CEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred eEEEEEcccC----cEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEec
Confidence 9999999886 677888999999999 9999999998665 6566554
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.6e-40 Score=276.42 Aligned_cols=251 Identities=13% Similarity=0.179 Sum_probs=211.5
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcc
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSN 101 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~ 101 (308)
.+.++++++.|++|++||..++ .....+.+|... +++|+|++++ ++|+.|++|++||+.+++.+.
T Consensus 24 ~~~~l~s~~~dg~v~lWd~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~ 91 (304)
T 2ynn_A 24 TEPWVLTTLYSGRVELWNYETQ------------VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV 91 (304)
T ss_dssp SSSEEEEEETTSEEEEEETTTT------------EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCC------------ceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEE
Confidence 3678999999999999998876 111223455555 7999999999 999999999999998886543
Q ss_pred cccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeC-CCCEEEEeeCCCcEEEEeC
Q 021744 102 INNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPS-GSDKLYSGSKDETVRVWDC 179 (308)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~dg~v~~wd~ 179 (308)
....|...+..+.|+|++.. ++|+.|+.|++||++++......+.+|...|.+++|+| ++.+|++|+.|++|++||+
T Consensus 92 -~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~ 170 (304)
T 2ynn_A 92 -DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL 170 (304)
T ss_dssp -EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEET
T ss_pred -EEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence 34567788999999999976 89999999999999987566778899999999999999 5789999999999999999
Q ss_pred CCCeEEEEEe--CCCeeEEE--E--cCCCEEEEEc-CCcEEEEEcCCCcee-eeeCCCCCEEEEEEeCC--EEEEEcCCC
Q 021744 180 ASGQCAGVIN--LGGEVGCM--I--SEGPWIFIGV-TNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDG 249 (308)
Q Consensus 180 ~~~~~~~~~~--~~~~v~~~--~--~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~~~~v~~~~~~~~--~l~~g~~dg 249 (308)
++.++...+. +...+..+ . +++++|++++ |++|++||+++++++ .+.+|...|.+++|+|+ +|++|+.||
T Consensus 171 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg 250 (304)
T 2ynn_A 171 GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDG 250 (304)
T ss_dssp TCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTS
T ss_pred CCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCC
Confidence 9887766665 44455544 2 3677888776 999999999999887 88999999999999999 999999999
Q ss_pred eEEEEEcCCCCcccccceeccccCCCeEE-EEecCCC--eEEEeec
Q 021744 250 AILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVT--SLLGSVS 292 (308)
Q Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~--~l~~s~s 292 (308)
.|++||+.+. +.+..+..|...+.+ +|+|++. +++++.+
T Consensus 251 ~i~iWd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~ 292 (304)
T 2ynn_A 251 TLKIWNSSTY----KVEKTLNVGLERSWCIATHPTGRKNYIASGFD 292 (304)
T ss_dssp CEEEEETTTC----CEEEEECCSSSSEEEEEECTTCGGGCEEEEET
T ss_pred eEEEEECCCC----ceeeeccCCCccEEEEEECCCCCceEEEEecC
Confidence 9999999987 778889999999999 9999875 4565553
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=283.59 Aligned_cols=266 Identities=13% Similarity=0.087 Sum_probs=203.8
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCeeeccCCCcEEEEECCCCCCcccc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWGRNNNFNNHSNNYRAGNSKNSNIN 103 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~~s~~~d~~i~vwd~~~~~~~~~~ 103 (308)
|.+|++++ |.++|+||............+ ..........|... +++|+|++..++|+.||+|+|||+++++.....
T Consensus 42 G~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~ 119 (344)
T 4gqb_B 42 GALLLGAS-SLSGRCWAGSLWLFKDPCAAP-NEGFCSAGVQTEAGVADLTWVGERGILVASDSGAVELWELDENETLIVS 119 (344)
T ss_dssp SCEEEEEE-CCSSSCCCEEEEEESSGGGTT-CGGGCSEEEEESSCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEE
T ss_pred CCEEEEEe-CCceEEeeceeeeeccccccC-CcceeeeeeccCCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEe
Confidence 56777776 889999984432000000000 00001111123333 899999975599999999999999888765332
Q ss_pred ---cceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCC-CEEEEeeCCCcEEEEe
Q 021744 104 ---NRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGS-DKLYSGSKDETVRVWD 178 (308)
Q Consensus 104 ---~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~dg~v~~wd 178 (308)
..+|...|.++.|+|++.. ++|+.|+.|++||+.++ +.+..+.+|...|.+++|+|++ .+|++++.|++|++||
T Consensus 120 ~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~-~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd 198 (344)
T 4gqb_B 120 KFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ-VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWD 198 (344)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred eccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC-cEEEEEcCcCCceEEEEecCCCCCceeeecccccccccc
Confidence 3467778999999999976 89999999999999999 8999999999999999999987 4789999999999999
Q ss_pred CCCCeEEEEEe---CCCeeEEE--Ec-CCCEEEEEc-CCcEEEEEcCCCcee-eeeCCCCCEEEEEEeCC---EEEEEcC
Q 021744 179 CASGQCAGVIN---LGGEVGCM--IS-EGPWIFIGV-TNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND---LLFAGTQ 247 (308)
Q Consensus 179 ~~~~~~~~~~~---~~~~v~~~--~~-~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~~~~v~~~~~~~~---~l~~g~~ 247 (308)
+++++++..+. +...+.++ .+ +++++++|+ |+.|++||+++++++ .+.+|...|++++|+|+ +|++|+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~ 278 (344)
T 4gqb_B 199 TRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSE 278 (344)
T ss_dssp TTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEET
T ss_pred ccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeC
Confidence 99999888775 33445555 34 456788776 999999999999877 88999999999999997 7899999
Q ss_pred CCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEe-e-ceEEEEee
Q 021744 248 DGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGS-V-SFIMFIGQ 299 (308)
Q Consensus 248 dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s-~-s~~i~~~~ 299 (308)
|++|++||+.++ + +..+.+|...|++ +|+|+++.++++ + +..|.++.
T Consensus 279 D~~i~vwd~~~~----~-~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~ 328 (344)
T 4gqb_B 279 DCSLAVLDSSLS----E-LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHV 328 (344)
T ss_dssp TSCEEEECTTCC----E-EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred CCeEEEEECCCC----c-EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEE
Confidence 999999999885 3 3457899999999 999999876643 3 55555554
No 6
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6.1e-38 Score=269.04 Aligned_cols=256 Identities=18% Similarity=0.217 Sum_probs=212.4
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCC---
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKN--- 99 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~--- 99 (308)
+.+|||++.|++|++||..+++. ......|... +++|+|+|.. ++|+.|+++++|++.....
T Consensus 76 ~~~l~s~s~Dg~v~vWd~~~~~~------------~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~ 143 (354)
T 2pbi_B 76 KRRIVSSSQDGKVIVWDSFTTNK------------EHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENM 143 (354)
T ss_dssp SSEEEEEETTSEEEEEETTTCCE------------EEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCS
T ss_pred CCEEEEEeCCCeEEEEECCCCCc------------ceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccc
Confidence 57899999999999999876611 1112233333 7999999999 9999999999999964421
Q ss_pred --cccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeC--CCCEEEEeeCCCcE
Q 021744 100 --SNINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPS--GSDKLYSGSKDETV 174 (308)
Q Consensus 100 --~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~s~dg~v 174 (308)
.......|...+..+.|++++.. ++++.|+.|++||++++ +.+..+.+|...|.+++|+| ++++|++|+.|++|
T Consensus 144 ~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v 222 (354)
T 2pbi_B 144 AAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG-QLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKA 222 (354)
T ss_dssp GGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCE
T ss_pred cccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC-eEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeE
Confidence 11223456677899999999865 89999999999999999 78999999999999999987 46899999999999
Q ss_pred EEEeCCCCeEEEEEe-CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCcee-eeeC--CCCCEEEEEEeCC--EEEEE
Q 021744 175 RVWDCASGQCAGVIN-LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDL-SLSG--PVGQVYAMAVGND--LLFAG 245 (308)
Q Consensus 175 ~~wd~~~~~~~~~~~-~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~--~~~~v~~~~~~~~--~l~~g 245 (308)
++||+++++++..+. |...+.++ .|++.+|++++ |++|++||+++.+.. .+.. +...+.+++|+|+ +|++|
T Consensus 223 ~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g 302 (354)
T 2pbi_B 223 MVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAG 302 (354)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEE
T ss_pred EEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEE
Confidence 999999999998887 77788776 47889999877 999999999998766 3332 3357899999999 99999
Q ss_pred cCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee-ceEEEEe
Q 021744 246 TQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV-SFIMFIG 298 (308)
Q Consensus 246 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~ 298 (308)
+.|+.|++||+.++ +.+..+.+|...|.+ +|+||+++|++++ +..|.+|
T Consensus 303 ~~d~~i~vwd~~~~----~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 303 YNDYTINVWDVLKG----SRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp ETTSCEEEEETTTC----SEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred ECCCcEEEEECCCC----ceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 99999999999887 667888899999999 9999999998665 6666655
No 7
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.2e-38 Score=272.03 Aligned_cols=261 Identities=13% Similarity=0.086 Sum_probs=203.0
Q ss_pred CCCceEEecC------CCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCeeeccCCCcEEEEECCC
Q 021744 25 GGGLSTADTR------QKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWGRNNNFNNHSNNYRAGN 96 (308)
Q Consensus 25 ~~~~~~s~s~------d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~~s~~~d~~i~vwd~~~ 96 (308)
.|.+||++|. |++|++|+...+... ........+|... +++|+|++.+++++.|++|+|||+.+
T Consensus 53 DG~~las~s~d~~~~wd~~v~~~~~~~~~~~--------~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~ 124 (357)
T 4g56_B 53 DGALLLAASSLSSRTWGGSIWVFKDPEGAPN--------ESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILE 124 (357)
T ss_dssp SSCEEEEEECSSSSSCCEEEEEESSCC---C--------GGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC----
T ss_pred CCCEEEEEcCCCCccccCeEEEEECCCCCcc--------eeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccc
Confidence 3679999998 678999987766110 1112223456655 89999998778888999999999987
Q ss_pred CCCcccc---cceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCC-EEEEeeCC
Q 021744 97 SKNSNIN---NRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSD-KLYSGSKD 171 (308)
Q Consensus 97 ~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~d 171 (308)
++..... ...|...+.++.|+|++.. ++++.|+.|++||++++ +.+..+.+|...|.+++|+|++. ++++++.|
T Consensus 125 ~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~-~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~d 203 (357)
T 4g56_B 125 KESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQK-AVLKSYNAHSSEVNCVAACPGKDTIFLSCGED 203 (357)
T ss_dssp ----CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECTTCSSCEEEEETT
T ss_pred cceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC-cEEEEEcCCCCCEEEEEEccCCCceeeeeccC
Confidence 7654322 2356777999999999976 88999999999999999 88999999999999999999874 78999999
Q ss_pred CcEEEEeCCCCeEEEEEe---CCCeeEEE--EcC-CCEEEEEc-CCcEEEEEcCCCcee-eeeCCCCCEEEEEEeCC---
Q 021744 172 ETVRVWDCASGQCAGVIN---LGGEVGCM--ISE-GPWIFIGV-TNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--- 240 (308)
Q Consensus 172 g~v~~wd~~~~~~~~~~~---~~~~v~~~--~~~-~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~~~~v~~~~~~~~--- 240 (308)
++|++||+++++++..+. +...+.++ .|+ +.+|++|+ |+.|++||+++++.. .+.+|...|++++|+|+
T Consensus 204 g~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~ 283 (357)
T 4g56_B 204 GRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSP 283 (357)
T ss_dssp SCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSC
T ss_pred CceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCC
Confidence 999999999988776665 44556665 355 56777776 999999999998877 78899999999999987
Q ss_pred EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEec-CCCeEEEee-ceEEEEee
Q 021744 241 LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSR-DVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 241 ~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~-d~~~l~~s~-s~~i~~~~ 299 (308)
+|++|+.|++|+|||++++ +++.. .+|...|++ +|+| |+.+|++++ +..|.++.
T Consensus 284 ~lasgs~D~~i~iwd~~~~----~~~~~-~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~ 340 (357)
T 4g56_B 284 FLASISEDCTVAVLDADFS----EVFRD-LSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHH 340 (357)
T ss_dssp CEEEEETTSCEEEECTTSC----EEEEE-CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred EEEEEeCCCEEEEEECCCC----cEeEE-CCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEE
Confidence 7999999999999999986 54444 479999999 9998 788888655 55555554
No 8
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=8.1e-38 Score=270.81 Aligned_cols=258 Identities=17% Similarity=0.230 Sum_probs=207.4
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCC---
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSK--- 98 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~--- 98 (308)
.+.+|+|++.|++|++||..++. ....+.+|... +++|+|++.+ ++|+.|++|++||+.+..
T Consensus 77 ~~~~l~s~s~D~~v~iWd~~~~~------------~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~ 144 (380)
T 3iz6_a 77 EKNWIVSASQDGRLIVWNALTSQ------------KTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRD 144 (380)
T ss_dssp TSSCEEEEETTSEEEEEETTTTE------------EEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCC
T ss_pred CCCEEEEEeCCCeEEEEECCCCc------------cceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCcccc
Confidence 36789999999999999987761 11223455555 7999999999 999999999999996532
Q ss_pred ---CcccccceeeeeeeeeeeecCC--ceEEeeCCCeEEEEEcCCCceeeeEe-----eCcccceEEEEEeC-CCCEEEE
Q 021744 99 ---NSNINNRAVIKTDILCRNWVQG--NCMYGEKCKFLHSWTVGDGFKLLTQL-----EGHQKVVSGITLPS-GSDKLYS 167 (308)
Q Consensus 99 ---~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~d~~i~iwd~~~~~~~~~~~-----~~h~~~v~~~~~~~-~~~~l~s 167 (308)
.......+|...+..+.|.|++ .+++|+.|+.|++||+.++ +.+..+ .+|...|.+++|++ ++.++++
T Consensus 145 ~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 223 (380)
T 3iz6_a 145 GNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTG-QRISIFGSEFPSGHTADVLSLSINSLNANMFIS 223 (380)
T ss_dssp CSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTC-CEEEEECCCSSSSCCSCEEEEEECSSSCCEEEE
T ss_pred CCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCC-cEEEEeecccCCCCccCeEEEEeecCCCCEEEE
Confidence 1222346777788999999875 3599999999999999998 666666 67999999999987 7899999
Q ss_pred eeCCCcEEEEeCC-CCeEEEEEe-CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCcee-eeeCC-------CCCEEE
Q 021744 168 GSKDETVRVWDCA-SGQCAGVIN-LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDL-SLSGP-------VGQVYA 234 (308)
Q Consensus 168 ~s~dg~v~~wd~~-~~~~~~~~~-~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~-------~~~v~~ 234 (308)
|+.|++|++||++ ..+.+..+. |...+.++ .|++++|++++ |++|++||+++++.. .+..+ ...|++
T Consensus 224 gs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~ 303 (380)
T 3iz6_a 224 GSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTS 303 (380)
T ss_dssp EETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSE
T ss_pred EECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEE
Confidence 9999999999998 456777776 77778776 57899999887 999999999999876 34332 234899
Q ss_pred EEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceec----cccCCCeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 235 MAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASL----KVHTDSNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 235 ~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~----~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
++|+|+ +|++|+.||.|++||+..+ +.+..+ .+|...|++ +|+|||.+|++++ +..|.+|.
T Consensus 304 ~~~s~~g~~l~~g~~dg~i~vwd~~~~----~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~ 372 (380)
T 3iz6_a 304 VAFSISGRLLFAGYSNGDCYVWDTLLA----EMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWA 372 (380)
T ss_dssp EEECSSSSEEEEECTTSCEEEEETTTC----CEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred EEECCCCCEEEEEECCCCEEEEECCCC----ceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEe
Confidence 999999 9999999999999999886 444444 579999999 9999999998665 44444443
No 9
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.4e-36 Score=255.80 Aligned_cols=257 Identities=18% Similarity=0.282 Sum_probs=212.1
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcc
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSN 101 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~ 101 (308)
.+.++++++.|++|++|+...+. ....+.+|... +++|+|++++ ++++.|++|++||+.+++...
T Consensus 34 ~~~~l~s~~~dg~i~iw~~~~~~------------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~ 101 (312)
T 4ery_A 34 NGEWLASSSADKLIKIWGAYDGK------------FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK 101 (312)
T ss_dssp TSSEEEEEETTSCEEEEETTTCC------------EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCEEEEeeCCCeEEEEeCCCcc------------cchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEE
Confidence 36789999999999999987661 11223466666 8999999999 999999999999998776542
Q ss_pred cccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCC
Q 021744 102 INNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCA 180 (308)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~ 180 (308)
....|...+.++.|+|++.. ++++.|+.|++||++++ +.+..+..|..+|.+++|+|++++|++++.|+.|++||++
T Consensus 102 -~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~ 179 (312)
T 4ery_A 102 -TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 179 (312)
T ss_dssp -EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred -EEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-EEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 34556677999999999876 88999999999999998 7888999999999999999999999999999999999999
Q ss_pred CCeEEEEEe--CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCcee-eeeCCCCCEE--EEEEe-CC--EEEEEcCCC
Q 021744 181 SGQCAGVIN--LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDL-SLSGPVGQVY--AMAVG-ND--LLFAGTQDG 249 (308)
Q Consensus 181 ~~~~~~~~~--~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~~~~v~--~~~~~-~~--~l~~g~~dg 249 (308)
+++.+..+. +...+.++ .+++++|++++ |+.|++||+++++.. .+.+|..... ...++ ++ +|++|+.||
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg 259 (312)
T 4ery_A 180 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 259 (312)
T ss_dssp TCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTS
T ss_pred CCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCC
Confidence 999888775 34455544 57889998776 999999999999877 6667765432 23344 33 899999999
Q ss_pred eEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee---ceEEEEee
Q 021744 250 AILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV---SFIMFIGQ 299 (308)
Q Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~---s~~i~~~~ 299 (308)
.|++||+.++ +.+..+.+|...|.. +|+|++.++++++ +..|.+|.
T Consensus 260 ~i~vwd~~~~----~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~ 309 (312)
T 4ery_A 260 LVYIWNLQTK----EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 309 (312)
T ss_dssp CEEEEETTTC----CEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEE
T ss_pred EEEEEECCCc----hhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEec
Confidence 9999999987 778889999999999 9999999998654 55555554
No 10
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.9e-36 Score=253.21 Aligned_cols=232 Identities=14% Similarity=0.177 Sum_probs=196.2
Q ss_pred CCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcC
Q 021744 62 PAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVG 137 (308)
Q Consensus 62 ~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~ 137 (308)
..+.+|... +++|+|++++ ++++.|++|++||+++++.+. ....|...+..+.|++++.. ++|+.|+.|++||+.
T Consensus 7 ~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~ 85 (304)
T 2ynn_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVR-SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (304)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE-EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred EeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeE-EeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECC
Confidence 345678777 8999999999 999999999999998775442 33456667899999999976 899999999999999
Q ss_pred CCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCC-eEEEEEe-CCCeeEEEE--c-CCCEEEEEc-CCc
Q 021744 138 DGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG-QCAGVIN-LGGEVGCMI--S-EGPWIFIGV-TNF 211 (308)
Q Consensus 138 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~-~~~~~~~-~~~~v~~~~--~-~~~~l~~~~-d~~ 211 (308)
++ +.+..+.+|.+.|.+++|+|++++|++|+.|++|++||++++ .....+. |...+.++. | ++.+|++|+ |++
T Consensus 86 ~~-~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~ 164 (304)
T 2ynn_A 86 TG-EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRT 164 (304)
T ss_dssp TC-CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSE
T ss_pred CC-cEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCe
Confidence 99 788899999999999999999999999999999999999987 4445555 777788773 4 467888776 999
Q ss_pred EEEEEcCCCcee-e-eeCCCCCEEEEEEeC--C--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCC
Q 021744 212 VKAWNTQTNTDL-S-LSGPVGQVYAMAVGN--D--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDV 284 (308)
Q Consensus 212 i~~wd~~~~~~~-~-~~~~~~~v~~~~~~~--~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~ 284 (308)
|++||+++.... . ...|...+..+.++| + +|++|+.|+.|++||++++ +++.++.+|...|.+ +|+|++
T Consensus 165 v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~----~~~~~~~~h~~~v~~~~~~p~~ 240 (304)
T 2ynn_A 165 VKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK----SCVATLEGHMSNVSFAVFHPTL 240 (304)
T ss_dssp EEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTT----EEEEEEECCSSCEEEEEECSSS
T ss_pred EEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC----ccceeeCCCCCCEEEEEECCCC
Confidence 999999887655 3 345668899999987 4 8999999999999999987 788899999999999 999999
Q ss_pred CeEEEee-ceEEEEee
Q 021744 285 TSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 285 ~~l~~s~-s~~i~~~~ 299 (308)
.+|++++ +..|.+|.
T Consensus 241 ~~l~s~s~Dg~i~iWd 256 (304)
T 2ynn_A 241 PIIISGSEDGTLKIWN 256 (304)
T ss_dssp SEEEEEETTSCEEEEE
T ss_pred CEEEEEcCCCeEEEEE
Confidence 9888665 55555544
No 11
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-36 Score=257.62 Aligned_cols=263 Identities=16% Similarity=0.119 Sum_probs=195.9
Q ss_pred ceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCC-----
Q 021744 28 LSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKN----- 99 (308)
Q Consensus 28 ~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~----- 99 (308)
+||+++.|++|++|+...+.. ..+. .....+|... +++|+|++++ ++|+.|++|+|||++....
T Consensus 26 ~las~~~D~~i~lw~~~~~~~---~~~~-----~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~ 97 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDF---TLID-----VLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEM 97 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCC---EEEE-----EECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCC
T ss_pred EEEEEcCCCEEEEEEecCCCe---EEEE-----EEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccc
Confidence 899999999999999876410 0000 0001237666 8999999999 9999999999999954321
Q ss_pred -cccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCC---ceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcE
Q 021744 100 -SNINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDG---FKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETV 174 (308)
Q Consensus 100 -~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v 174 (308)
.......|...+..+.|+|++.. ++++.|+.|++||+... .+.+..+.+|...|.+++|+|++.+|++++.|++|
T Consensus 98 ~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i 177 (330)
T 2hes_X 98 DLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTV 177 (330)
T ss_dssp EEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCE
T ss_pred eeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeE
Confidence 11234567788999999999976 89999999999999532 14577889999999999999999999999999999
Q ss_pred EEEeCCCC--eEEEEEe-CCCeeEEE--EcC--CCEEEEEc-CCcEEEEEcCCC--------cee-eeeC-CCCCEEEEE
Q 021744 175 RVWDCASG--QCAGVIN-LGGEVGCM--ISE--GPWIFIGV-TNFVKAWNTQTN--------TDL-SLSG-PVGQVYAMA 236 (308)
Q Consensus 175 ~~wd~~~~--~~~~~~~-~~~~v~~~--~~~--~~~l~~~~-d~~i~~wd~~~~--------~~~-~~~~-~~~~v~~~~ 236 (308)
++||+.++ +++..+. |...+.++ .++ +.+|++++ |++|++||++++ ... .+.. |...|++++
T Consensus 178 ~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 257 (330)
T 2hes_X 178 RIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVA 257 (330)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEE
T ss_pred EEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEE
Confidence 99999876 5667776 77788776 354 56788766 999999998764 222 3444 889999999
Q ss_pred EeCC-EEEEEcCCCeEEEEEcCCCCcccccc-eeccccCC-CeEE-EEec--CCCeEEEee-ceEEEEeec
Q 021744 237 VGND-LLFAGTQDGAILAWKFNVTTNCFEPA-ASLKVHTD-SNRA-HFSR--DVTSLLGSV-SFIMFIGQN 300 (308)
Q Consensus 237 ~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~-~v~~-~~s~--d~~~l~~s~-s~~i~~~~~ 300 (308)
|+++ +|++++.||.|++||..++.. +.+ ..+..|.. .+.+ +|+| ++++|++++ +..|.++.-
T Consensus 258 ~s~~~~l~s~~~dg~v~iw~~~~~~~--~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~ 326 (330)
T 2hes_X 258 WGFNGLIASVGADGVLAVYEEVDGEW--KVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSL 326 (330)
T ss_dssp ECTTSCEEEEETTSCEEEEEEETTEE--EEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC
T ss_pred EcCCCEEEEEeCCCEEEEEEcCCCce--EEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEe
Confidence 9988 999999999999999987521 222 23457776 8888 9999 688888655 667766653
No 12
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.3e-36 Score=277.15 Aligned_cols=257 Identities=12% Similarity=0.159 Sum_probs=203.7
Q ss_pred CceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcccc
Q 021744 27 GLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNIN 103 (308)
Q Consensus 27 ~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~ 103 (308)
.+|++++.|++|++||...+ .....+.+|... +++|+|+|++ |+|+.|++|++||+.+++.....
T Consensus 161 ~~l~s~s~D~~v~lwd~~~~------------~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~ 228 (611)
T 1nr0_A 161 FRIISGSDDNTVAIFEGPPF------------KFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVF 228 (611)
T ss_dssp CEEEEEETTSCEEEEETTTB------------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEC
T ss_pred eEEEEEeCCCeEEEEECCCC------------eEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeee
Confidence 36999999999999997654 112235678777 8999999999 99999999999999877654332
Q ss_pred cc------eeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceee---------------------------------
Q 021744 104 NR------AVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLL--------------------------------- 143 (308)
Q Consensus 104 ~~------~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~--------------------------------- 143 (308)
.. .|...+..+.|+|++.. ++++.|++|++||+.++ +.+
T Consensus 229 ~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~ 307 (611)
T 1nr0_A 229 EDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATL-KVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFIN 307 (611)
T ss_dssp BCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT-EEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEE
T ss_pred ccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCC-ceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEE
Confidence 22 67888999999999976 89999999999999876 332
Q ss_pred ----------eEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEE-------------------------
Q 021744 144 ----------TQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVI------------------------- 188 (308)
Q Consensus 144 ----------~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~------------------------- 188 (308)
..+.+|...|.+++|+|++++|++++.|++|++||+.+++....+
T Consensus 308 ~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d 387 (611)
T 1nr0_A 308 FVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWD 387 (611)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETT
T ss_pred EEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcC
Confidence 344689999999999999999999999999999999876543221
Q ss_pred ----------------------------------------------------------eCCCeeEEE--EcCCCEEEEEc
Q 021744 189 ----------------------------------------------------------NLGGEVGCM--ISEGPWIFIGV 208 (308)
Q Consensus 189 ----------------------------------------------------------~~~~~v~~~--~~~~~~l~~~~ 208 (308)
.+...+.++ .|++++|++|+
T Consensus 388 ~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs 467 (611)
T 1nr0_A 388 DHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGG 467 (611)
T ss_dssp TEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEE
T ss_pred CceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeC
Confidence 001122333 57899999877
Q ss_pred -CCcEEEEEcCCCcee--eeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCccccccee--ccccCCCeEE-EE
Q 021744 209 -TNFVKAWNTQTNTDL--SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAAS--LKVHTDSNRA-HF 280 (308)
Q Consensus 209 -d~~i~~wd~~~~~~~--~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~v~~-~~ 280 (308)
|++|++||+.+++.. ...+|...|++++|+|+ +|++++.|+.|++||+.+.. +.+.. +..|...|.+ +|
T Consensus 468 ~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~---~~~~~~~~~~H~~~V~~v~f 544 (611)
T 1nr0_A 468 QDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNF---ELAHTNSWTFHTAKVACVSW 544 (611)
T ss_dssp TTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTT---EESCCCCCCCCSSCEEEEEE
T ss_pred CCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCC---ceeeeeeeeecccceeEEEE
Confidence 999999999887543 33679999999999999 99999999999999998731 33333 3459999999 99
Q ss_pred ecCCCeEEEee-ceEEEEee
Q 021744 281 SRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 281 s~d~~~l~~s~-s~~i~~~~ 299 (308)
+|||++|++++ +..|.+|.
T Consensus 545 spdg~~lasgs~D~~v~lW~ 564 (611)
T 1nr0_A 545 SPDNVRLATGSLDNSVIVWN 564 (611)
T ss_dssp CTTSSEEEEEETTSCEEEEE
T ss_pred CCCCCEEEEEECCCcEEEEE
Confidence 99999999665 55555554
No 13
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.5e-36 Score=263.12 Aligned_cols=231 Identities=15% Similarity=0.176 Sum_probs=204.9
Q ss_pred Cccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCC
Q 021744 63 AATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGD 138 (308)
Q Consensus 63 ~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~ 138 (308)
.+.+|... +++|+|++.+ ++|+.|++|+|||+.+++... ...+|...+.++.|++++.. ++|+.|+.|++||+.+
T Consensus 103 ~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~-~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~ 181 (410)
T 1vyh_C 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER-TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181 (410)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCE-EECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS
T ss_pred eecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE-EEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence 45688887 8999999999 999999999999998876543 44567888999999999976 8999999999999998
Q ss_pred CceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe-CCCeeEEE--EcCCCEEEEEc-CCcEEE
Q 021744 139 GFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN-LGGEVGCM--ISEGPWIFIGV-TNFVKA 214 (308)
Q Consensus 139 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-~~~~v~~~--~~~~~~l~~~~-d~~i~~ 214 (308)
. +.+..+.+|...|.+++|+|++.+|++++.|++|++||+++++++..+. |...+.++ .+++.++++++ |+.|++
T Consensus 182 ~-~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~v 260 (410)
T 1vyh_C 182 F-ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260 (410)
T ss_dssp S-CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred C-ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEE
Confidence 8 7889999999999999999999999999999999999999999998888 66777766 46788999876 999999
Q ss_pred EEcCCCcee-eeeCCCCCEEEEEEeC---------------------C-EEEEEcCCCeEEEEEcCCCCcccccceeccc
Q 021744 215 WNTQTNTDL-SLSGPVGQVYAMAVGN---------------------D-LLFAGTQDGAILAWKFNVTTNCFEPAASLKV 271 (308)
Q Consensus 215 wd~~~~~~~-~~~~~~~~v~~~~~~~---------------------~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~ 271 (308)
||+++++.. .+.+|...|.+++|+| . +|++|+.|+.|++||++++ +++..+.+
T Consensus 261 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~----~~~~~~~~ 336 (410)
T 1vyh_C 261 WVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG----MCLMTLVG 336 (410)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT----EEEEEEEC
T ss_pred EECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCC----ceEEEEEC
Confidence 999999877 7889999999999998 3 7999999999999999987 77888999
Q ss_pred cCCCeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 272 HTDSNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 272 ~~~~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
|...|.+ +|+|++++|++++ +..|.++.
T Consensus 337 h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd 366 (410)
T 1vyh_C 337 HDNWVRGVLFHSGGKFILSCADDKTLRVWD 366 (410)
T ss_dssp CSSCEEEEEECSSSSCEEEEETTTEEEEEC
T ss_pred CCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 9999999 9999999998666 55555554
No 14
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.6e-36 Score=253.72 Aligned_cols=260 Identities=14% Similarity=0.173 Sum_probs=206.0
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcc
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSN 101 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~ 101 (308)
.+.+++|++.|++|++|+....... + ......+.+|... +++|+|++.+ ++|+.|++|++||+.+++...
T Consensus 29 ~~~~l~s~s~D~~v~~W~~~~~~~~---~----~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~ 101 (319)
T 3frx_A 29 QPNLLLSASRDKTLISWKLTGDDQK---F----GVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQ 101 (319)
T ss_dssp CTTEEEEEETTSEEEEEEEEEETTE---E----EEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred CccEEEEecCCccEEEecCCCCCcc---c----cccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeE
Confidence 4578999999999999997643100 0 0011235678777 8999999999 999999999999998886542
Q ss_pred cccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCC------CCEEEEeeCCCcE
Q 021744 102 INNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSG------SDKLYSGSKDETV 174 (308)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~------~~~l~s~s~dg~v 174 (308)
....|...+..+.|++++.. ++|+.|+.|++||++. +.+..+.+|...|.++++.|. +..+++++.|++|
T Consensus 102 -~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i 178 (319)
T 3frx_A 102 -RFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG--QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMV 178 (319)
T ss_dssp -EEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS--CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCE
T ss_pred -EEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC--CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEE
Confidence 34567778999999999876 8999999999999975 457788999999999999985 4489999999999
Q ss_pred EEEeCCCCeEEEEEe-CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCceeeeeCCCCCEEEEEEeCC--EEEEEcCC
Q 021744 175 RVWDCASGQCAGVIN-LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LLFAGTQD 248 (308)
Q Consensus 175 ~~wd~~~~~~~~~~~-~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~--~l~~g~~d 248 (308)
++||+++.+....+. |...+.++ .|++++|++++ |+.|++||+++++.+....+...|.+++|+|+ ++++++ +
T Consensus 179 ~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~-~ 257 (319)
T 3frx_A 179 KAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAAT-A 257 (319)
T ss_dssp EEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEE-T
T ss_pred EEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEc-C
Confidence 999999999888877 77788776 57899999876 99999999999988733334578999999999 666665 4
Q ss_pred CeEEEEEcCCCCcccccceec--------cccCCCeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 249 GAILAWKFNVTTNCFEPAASL--------KVHTDSNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 249 g~i~iwd~~~~~~~~~~~~~~--------~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
+.+++|++... ..+..+ ..|...+.+ +|+|||++|++++ +..|.+|.
T Consensus 258 ~~i~v~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd 314 (319)
T 3frx_A 258 TGIKVFSLDPQ----YLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ 314 (319)
T ss_dssp TEEEEEEETTE----EEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCcEEEEeCcC----eeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEE
Confidence 56999999875 333322 235667778 9999999999665 55555543
No 15
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.4e-36 Score=256.03 Aligned_cols=266 Identities=13% Similarity=0.132 Sum_probs=205.0
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCC-c
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKN-S 100 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~-~ 100 (308)
.+.+||+++.|++|++|+...+.. .+ ......+|... +++|+|++++ ++|+.|++|++||+..++. .
T Consensus 27 ~g~~las~~~D~~i~iw~~~~~~~-~~--------~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~ 97 (345)
T 3fm0_A 27 AGTLLASCGGDRRIRIWGTEGDSW-IC--------KSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFEC 97 (345)
T ss_dssp TSSCEEEEETTSCEEEEEEETTEE-EE--------EEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEE
T ss_pred CCCEEEEEcCCCeEEEEEcCCCcc-ee--------eeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEE
Confidence 367899999999999999876510 00 01112467776 8999999999 9999999999999976642 2
Q ss_pred ccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCc--eeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEE
Q 021744 101 NINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGF--KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVW 177 (308)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~w 177 (308)
......|...+..+.|+|++.. ++++.|+.|++||+.++. +.+..+.+|...|.+++|+|++++|++++.|++|++|
T Consensus 98 ~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w 177 (345)
T 3fm0_A 98 VTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLY 177 (345)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEE
T ss_pred EEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEE
Confidence 2344567788999999999976 899999999999998652 3466788999999999999999999999999999999
Q ss_pred eCCCCeEE--EEEe-CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCc---------------ee-eeeC-CCCCEEE
Q 021744 178 DCASGQCA--GVIN-LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNT---------------DL-SLSG-PVGQVYA 234 (308)
Q Consensus 178 d~~~~~~~--~~~~-~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~---------------~~-~~~~-~~~~v~~ 234 (308)
|+++++.. ..+. |...+.++ .+++++|++++ |++|++||..... ++ .+.+ |...|++
T Consensus 178 ~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 257 (345)
T 3fm0_A 178 REEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYD 257 (345)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEE
T ss_pred EecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEE
Confidence 99887643 4554 77778776 47899999876 9999999974321 11 2333 8889999
Q ss_pred EEEeCC--EEEEEcCCCeEEEEEcCCCCcccccc-----eeccccCCCeEE-EEecCCC-eEEEee-ceEEEEee
Q 021744 235 MAVGND--LLFAGTQDGAILAWKFNVTTNCFEPA-----ASLKVHTDSNRA-HFSRDVT-SLLGSV-SFIMFIGQ 299 (308)
Q Consensus 235 ~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~-----~~~~~~~~~v~~-~~s~d~~-~l~~s~-s~~i~~~~ 299 (308)
++|+|+ .|++++.|+.|++|+.........+. ....+|...|++ +|+|++. +|++++ +..|.+|.
T Consensus 258 v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~ 332 (345)
T 3fm0_A 258 IAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWK 332 (345)
T ss_dssp EEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred EEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEE
Confidence 999998 99999999999999987653211111 223579999999 9999985 666544 44444444
No 16
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4.5e-35 Score=250.12 Aligned_cols=264 Identities=10% Similarity=0.060 Sum_probs=201.2
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcc
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSN 101 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~ 101 (308)
.+.+||||+.|++|++||......... + ......+.+|... +++|+|++.+ ++|+.|++|++||+.+++...
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~-~----~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~ 112 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGY-F----GIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYK 112 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSB-S----EEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEE
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccc-c----ccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 467999999999999999875411000 0 0011235678777 8999999999 999999999999998876542
Q ss_pred cccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEe---eCcccceEEEEEeCCC----------CEEEE
Q 021744 102 INNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQL---EGHQKVVSGITLPSGS----------DKLYS 167 (308)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~---~~h~~~v~~~~~~~~~----------~~l~s 167 (308)
....|...+..+.|+|++.. ++++.|+.|++||+... . ...+ .+|...|.+++|+|++ .++++
T Consensus 113 -~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s 189 (343)
T 2xzm_R 113 -RFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-C-KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFAS 189 (343)
T ss_dssp -EEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-E-EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEE
T ss_pred -EEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-c-eeeeecccCCCceeeeeeeccccccccccCCCCCEEEE
Confidence 34567778999999999976 88999999999999854 2 2223 3789999999999986 78999
Q ss_pred eeCCCcEEEEeCCCCeEEEEEe-CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCC-ceeeeeCCCCCEEEEEEeCC-E
Q 021744 168 GSKDETVRVWDCASGQCAGVIN-LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTN-TDLSLSGPVGQVYAMAVGND-L 241 (308)
Q Consensus 168 ~s~dg~v~~wd~~~~~~~~~~~-~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~-~~~~~~~~~~~v~~~~~~~~-~ 241 (308)
++.|++|++||. ..+....+. |...+.++ .+++++|++++ |+.|++||++.. .......+...|.+++|+|+ .
T Consensus 190 ~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~ 268 (343)
T 2xzm_R 190 VGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQ 268 (343)
T ss_dssp EETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSC
T ss_pred EcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCC
Confidence 999999999994 466666665 77778776 47899999877 999999999544 33333345667999999999 4
Q ss_pred EEEEcCCCeEEEEEcCCCCcccccceec-----------cccCCCeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 242 LFAGTQDGAILAWKFNVTTNCFEPAASL-----------KVHTDSNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 242 l~~g~~dg~i~iwd~~~~~~~~~~~~~~-----------~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
+++++.|+.|++||+.++.. ..+..+ .+|...+.+ +|+|+|++|++++ +..|.++.
T Consensus 269 ~la~~~d~~v~iw~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~ 337 (343)
T 2xzm_R 269 WVAVGTDQGVKIFNLMTQSK--APVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFS 337 (343)
T ss_dssp EEEEEESSCEEEEESSSCCS--CSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEE
T ss_pred EEEEECCCCEEEEEeCCCCC--CceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEE
Confidence 45566788999999987632 111122 267788998 9999999998665 66665554
No 17
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.1e-36 Score=256.44 Aligned_cols=224 Identities=8% Similarity=-0.009 Sum_probs=183.8
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCccc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNI 102 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~ 102 (308)
...+++++.|++|++||..+++. .. .......+|... +++|+|+|++ ++|+.|++|++||+++++.+.
T Consensus 93 d~~l~~~s~dg~v~lWd~~~~~~---~~-----~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~- 163 (344)
T 4gqb_B 93 ERGILVASDSGAVELWELDENET---LI-----VSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLS- 163 (344)
T ss_dssp TTEEEEEETTSEEEEEEECTTSS---CE-----EEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE-
T ss_pred CCeEEEEECCCEEEEEeccCCCc---ee-----EeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE-
Confidence 35799999999999999987611 00 011233478877 8999999999 999999999999998876543
Q ss_pred ccceeeeeeeeeeeecCCc--eEEeeCCCeEEEEEcCCCceeeeEee--CcccceEEEEEeCC-CCEEEEeeCCCcEEEE
Q 021744 103 NNRAVIKTDILCRNWVQGN--CMYGEKCKFLHSWTVGDGFKLLTQLE--GHQKVVSGITLPSG-SDKLYSGSKDETVRVW 177 (308)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~--~~~g~~d~~i~iwd~~~~~~~~~~~~--~h~~~v~~~~~~~~-~~~l~s~s~dg~v~~w 177 (308)
...+|...+.++.|++++. +++++.|+.|++||++++ +....+. .|...+.+++|+|+ +.+|++|+.|++|++|
T Consensus 164 ~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~w 242 (344)
T 4gqb_B 164 SYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCP-KPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLV 242 (344)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSS-SCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred EEcCcCCceEEEEecCCCCCceeeecccccccccccccc-ceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEE
Confidence 4456888899999999884 388999999999999988 5666553 45667999999985 5678999999999999
Q ss_pred eCCCCeEEEEEe-CCCeeEEE--EcCC-CEEEEEc-CCcEEEEEcCCCceeeeeCCCCCEEEEEEeCC---EEEEEcCCC
Q 021744 178 DCASGQCAGVIN-LGGEVGCM--ISEG-PWIFIGV-TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND---LLFAGTQDG 249 (308)
Q Consensus 178 d~~~~~~~~~~~-~~~~v~~~--~~~~-~~l~~~~-d~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~---~l~~g~~dg 249 (308)
|+++++++..+. |...+.++ .+++ ++|++++ |++|++||++++++..+.+|.+.|++++|+|+ +|++++.|+
T Consensus 243 d~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~ 322 (344)
T 4gqb_B 243 DTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDH 322 (344)
T ss_dssp ESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTS
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCC
Confidence 999999999888 77888876 3666 5777766 99999999999998889999999999999997 788999999
Q ss_pred eEEEEEcCCC
Q 021744 250 AILAWKFNVT 259 (308)
Q Consensus 250 ~i~iwd~~~~ 259 (308)
+|++|++.+.
T Consensus 323 ~v~~w~v~~~ 332 (344)
T 4gqb_B 323 QVVHHVVPTE 332 (344)
T ss_dssp CEEEEECCC-
T ss_pred eEEEEECCCC
Confidence 9999999874
No 18
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.3e-35 Score=249.66 Aligned_cols=231 Identities=14% Similarity=0.184 Sum_probs=197.5
Q ss_pred ccccccc--eeEEecC----CCe-eeccCCCcEEEEECCCCCCc-ccccceeeeeeeeeeeecCCce-EEeeCCCeEEEE
Q 021744 64 ATANGAA--AKRFANN----TWG-RNNNFNNHSNNYRAGNSKNS-NINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSW 134 (308)
Q Consensus 64 ~~gh~~~--~i~~s~~----g~~-~s~~~d~~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iw 134 (308)
..+|... +++|+|+ +.+ ++|+.|++|+|||+..++.. .....+|...+.++.+++++.. ++++.|+.|++|
T Consensus 28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lW 107 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLW 107 (321)
T ss_dssp TTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred cccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 3478877 8999875 556 99999999999999765432 2234677788999999999876 899999999999
Q ss_pred EcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe-CCCeeEEE--EcCCCEEEEEc-CC
Q 021744 135 TVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN-LGGEVGCM--ISEGPWIFIGV-TN 210 (308)
Q Consensus 135 d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-~~~~v~~~--~~~~~~l~~~~-d~ 210 (308)
|+.++ +.+..+..|...+.+++|+|++++|++++.|+.|++||+++++....+. +...+.++ .|++++|++++ |+
T Consensus 108 d~~~~-~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg 186 (321)
T 3ow8_A 108 DLENG-KQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 186 (321)
T ss_dssp ETTTT-EEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTS
T ss_pred ECCCC-CEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCC
Confidence 99999 7888999999999999999999999999999999999999999888877 55566655 58899999877 99
Q ss_pred cEEEEEcCCCcee-eeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCe
Q 021744 211 FVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTS 286 (308)
Q Consensus 211 ~i~~wd~~~~~~~-~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~ 286 (308)
.|++||+++++.+ .+.+|..+|.+++|+|+ +|++|+.|+.|++||++++ +.+..+.+|...|.+ +|+|++++
T Consensus 187 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~----~~~~~~~~h~~~v~~~~~sp~~~~ 262 (321)
T 3ow8_A 187 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA----NLAGTLSGHASWVLNVAFCPDDTH 262 (321)
T ss_dssp CEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC----CEEEEECCCSSCEEEEEECTTSSE
T ss_pred eEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc----ceeEEEcCCCCceEEEEECCCCCE
Confidence 9999999999887 78899999999999999 9999999999999999986 677889999999999 99999999
Q ss_pred EEEee-ceEEEEee
Q 021744 287 LLGSV-SFIMFIGQ 299 (308)
Q Consensus 287 l~~s~-s~~i~~~~ 299 (308)
|++++ +..|.++.
T Consensus 263 l~s~s~D~~v~iwd 276 (321)
T 3ow8_A 263 FVSSSSDKSVKVWD 276 (321)
T ss_dssp EEEEETTSCEEEEE
T ss_pred EEEEeCCCcEEEEe
Confidence 98666 44444443
No 19
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.1e-35 Score=270.71 Aligned_cols=258 Identities=10% Similarity=0.060 Sum_probs=208.0
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCc-c
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNS-N 101 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~-~ 101 (308)
|.+||+++ +++|++|+...+ .....+.+|... +++|+|+|.+ |+|+.|++|+|||+.+++.. .
T Consensus 30 g~~l~~~~-~~~v~l~~~~~~------------~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~ 96 (611)
T 1nr0_A 30 GDKIQYCN-GTSVYTVPVGSL------------TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILK 96 (611)
T ss_dssp SSEEEEEE-TTEEEEEETTCS------------SCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEE
T ss_pred CCEEEeCC-CCEEEEecCCCc------------ccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceee
Confidence 56888887 579999998765 233446688887 8999999999 99999999999999755432 2
Q ss_pred cccceeeeeeeeeeeecCCce-EEeeCC----CeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCC-EEEEeeCCCcEE
Q 021744 102 INNRAVIKTDILCRNWVQGNC-MYGEKC----KFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSD-KLYSGSKDETVR 175 (308)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~-~~g~~d----~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~dg~v~ 175 (308)
.....|...+..++|+|++.. ++++.+ +.|++||. + +....+.+|...|.+++|+|++. .|++++.|++|+
T Consensus 97 ~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~-~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~ 173 (611)
T 1nr0_A 97 TTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT--G-TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVA 173 (611)
T ss_dssp EEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT--C-CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEE
T ss_pred EeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC--C-CCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEE
Confidence 234567778999999999976 555543 47888874 4 45678899999999999999986 599999999999
Q ss_pred EEeCCCCeEEEEEe-CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCcee-eee-------CCCCCEEEEEEeCC--E
Q 021744 176 VWDCASGQCAGVIN-LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDL-SLS-------GPVGQVYAMAVGND--L 241 (308)
Q Consensus 176 ~wd~~~~~~~~~~~-~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~-------~~~~~v~~~~~~~~--~ 241 (308)
+||.++++++..+. |...+.++ .|++++|++++ |++|++||+.+++.. .+. +|...|.+++|+|+ +
T Consensus 174 lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~ 253 (611)
T 1nr0_A 174 IFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTK 253 (611)
T ss_dssp EEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSE
T ss_pred EEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCE
Confidence 99999999888887 77788776 57899999876 999999999998876 442 79999999999999 9
Q ss_pred EEEEcCCCeEEEEEcCCCCccc---------------------------------------ccceeccccCCCeEE-EEe
Q 021744 242 LFAGTQDGAILAWKFNVTTNCF---------------------------------------EPAASLKVHTDSNRA-HFS 281 (308)
Q Consensus 242 l~~g~~dg~i~iwd~~~~~~~~---------------------------------------~~~~~~~~~~~~v~~-~~s 281 (308)
|++++.|++|++||+.+++... ++...+.+|...|.+ +|+
T Consensus 254 l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~s 333 (611)
T 1nr0_A 254 IASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSS 333 (611)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred EEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEe
Confidence 9999999999999998753100 112344579999999 999
Q ss_pred cCCCeEEEee-ceEEEEee
Q 021744 282 RDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 282 ~d~~~l~~s~-s~~i~~~~ 299 (308)
||+++|++++ +..|.++.
T Consensus 334 pdg~~l~s~s~D~~v~~Wd 352 (611)
T 1nr0_A 334 ADGKTLFSADAEGHINSWD 352 (611)
T ss_dssp TTSSEEEEEETTSCEEEEE
T ss_pred CCCCEEEEEeCCCcEEEEE
Confidence 9999999665 55555554
No 20
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.5e-34 Score=242.76 Aligned_cols=260 Identities=12% Similarity=0.123 Sum_probs=212.2
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcc
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSN 101 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~ 101 (308)
.+.++++++ |+.|++|+......... + ......+|... +++|+|++++ ++++.|++|++||+.+++...
T Consensus 62 ~~~~l~~~~-dg~i~iw~~~~~~~~~~-~------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 133 (337)
T 1gxr_A 62 PTRHVYTGG-KGCVKVWDISHPGNKSP-V------SQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRI 133 (337)
T ss_dssp SSSEEEEEC-BSEEEEEETTSTTCCSC-S------EEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EE
T ss_pred CCcEEEEcC-CCeEEEEECCCCCceee-e------ecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcce
Confidence 367888888 99999999887511000 0 00001145555 8999999999 999999999999998775321
Q ss_pred -cccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeC
Q 021744 102 -INNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDC 179 (308)
Q Consensus 102 -~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~ 179 (308)
.....+...+..+.+++++.. ++++.|+.|++||++++ +.+..+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 134 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~ 212 (337)
T 1gxr_A 134 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ-TLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDL 212 (337)
T ss_dssp EEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC-ceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEEC
Confidence 233445556889999999866 88999999999999998 788899999999999999999999999999999999999
Q ss_pred CCCeEEEEEeCCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCceeeeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEE
Q 021744 180 ASGQCAGVINLGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LLFAGTQDGAILAW 254 (308)
Q Consensus 180 ~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iw 254 (308)
++++.+..+.+...+.++ .++++++++++ ++.|++||+++.+...+..|...+.+++|+|+ +|++++.||.|++|
T Consensus 213 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 292 (337)
T 1gxr_A 213 REGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAW 292 (337)
T ss_dssp TTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred CCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEE
Confidence 999999999888877766 47889998776 89999999999988888899999999999998 99999999999999
Q ss_pred EcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee-ceEEEEe
Q 021744 255 KFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV-SFIMFIG 298 (308)
Q Consensus 255 d~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~ 298 (308)
|+.++ +.+. ...|...+.+ +|+|++++|++++ +..|.++
T Consensus 293 ~~~~~----~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 333 (337)
T 1gxr_A 293 RTPYG----ASIF-QSKESSSVLSCDISVDDKYIVTGSGDKKATVY 333 (337)
T ss_dssp ETTTC----CEEE-EEECSSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred ECCCC----eEEE-EecCCCcEEEEEECCCCCEEEEecCCCeEEEE
Confidence 99986 3333 3457888988 9999999988665 4444443
No 21
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.4e-35 Score=265.93 Aligned_cols=251 Identities=18% Similarity=0.244 Sum_probs=208.1
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcc
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSN 101 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~ 101 (308)
.+..+++++.|++|++|+.... ....+.+|... +++|+|++.. ++++.|++|++||.. ++.+
T Consensus 314 ~~~~l~t~~~d~~i~~w~~~~~-------------~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~-~~~~- 378 (577)
T 2ymu_A 314 DGQTIASASDDKTVKLWNRNGQ-------------HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQLL- 378 (577)
T ss_dssp TSSEEEEEETTSCEEEEETTSC-------------EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-CCEE-
T ss_pred CCCEEEEEeCCCeEEEEeCCCC-------------eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC-CCEE-
Confidence 3678999999999999997654 11223455555 8999999999 999999999999964 3322
Q ss_pred cccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCC
Q 021744 102 INNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCA 180 (308)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~ 180 (308)
.....|...+..+.|+|++.. ++++.|+.|++||.. + +.+..+.+|...|++++|+|++++|++++.|++|++||..
T Consensus 379 ~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~-~-~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~ 456 (577)
T 2ymu_A 379 QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-G-QLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN 456 (577)
T ss_dssp EEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-C-CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC-C-CEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 234556777999999999976 889999999999964 4 5788899999999999999999999999999999999965
Q ss_pred CCeEEEEEe-CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCceeeeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEE
Q 021744 181 SGQCAGVIN-LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LLFAGTQDGAILAW 254 (308)
Q Consensus 181 ~~~~~~~~~-~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iw 254 (308)
++.+..+. +...+.++ .|++++|++++ |+.|++||........+.+|...|++++|+|+ +|++++.||.|++|
T Consensus 457 -~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lw 535 (577)
T 2ymu_A 457 -GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLW 535 (577)
T ss_dssp -SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred -CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEE
Confidence 56666665 77788766 58899999876 99999999754444488999999999999999 99999999999999
Q ss_pred EcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee-ceEEEEe
Q 021744 255 KFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV-SFIMFIG 298 (308)
Q Consensus 255 d~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~ 298 (308)
|... +++..+.+|...|.+ +|+||+++|++++ +..|.+|
T Consensus 536 d~~~-----~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~W 576 (577)
T 2ymu_A 536 NRNG-----QLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLW 576 (577)
T ss_dssp CTTS-----CEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred eCCC-----CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEe
Confidence 9643 778889999999999 9999999998655 5556554
No 22
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.7e-34 Score=249.82 Aligned_cols=267 Identities=16% Similarity=0.195 Sum_probs=204.6
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccc-cCCCC-----CCccccccc--eeEEecCCCe-eeccCCCcEEEEECC
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHR-ELPLP-----PAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAG 95 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~-~~~~~-----~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~ 95 (308)
.+.+||+++ |+++++|+...+........+. ....+ .....+... +++|+|+|++ ++|+.|++|++||+.
T Consensus 75 dg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~ 153 (393)
T 1erj_A 75 DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIE 153 (393)
T ss_dssp TSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 367888876 7899999988762200000000 00000 000112222 7999999999 999999999999998
Q ss_pred CCCCcccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeC-CCCEEEEeeCCCc
Q 021744 96 NSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPS-GSDKLYSGSKDET 173 (308)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~dg~ 173 (308)
+++... ....|...+..+.|+|++.. ++++.|+.|++||++++ +....+. +...+.+++|+| ++++|++++.|++
T Consensus 154 ~~~~~~-~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~-~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~ 230 (393)
T 1erj_A 154 NRKIVM-ILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG-QCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRA 230 (393)
T ss_dssp TTEEEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT-EEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSC
T ss_pred CCcEEE-EEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC-eeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCc
Confidence 775442 34567778999999999966 89999999999999998 6666665 667899999999 8899999999999
Q ss_pred EEEEeCCCCeEEEEEe--------CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCc------------ee-eeeCCC
Q 021744 174 VRVWDCASGQCAGVIN--------LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNT------------DL-SLSGPV 229 (308)
Q Consensus 174 v~~wd~~~~~~~~~~~--------~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~------------~~-~~~~~~ 229 (308)
|++||+++++.+..+. |...+.++ .+++++|++++ |+.|++||+++.. +. .+.+|.
T Consensus 231 v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~ 310 (393)
T 1erj_A 231 VRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHK 310 (393)
T ss_dssp EEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCS
T ss_pred EEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEeccc
Confidence 9999999998887763 55667766 47899999877 9999999997642 22 677899
Q ss_pred CCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEec------CCCeEEEee-ceEEEEee
Q 021744 230 GQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSR------DVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 230 ~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~------d~~~l~~s~-s~~i~~~~ 299 (308)
..|.+++++|+ +|++|+.|+.|++||+.++ +++..+.+|...|.+ +|++ ++.+|++++ +..|.+|.
T Consensus 311 ~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~----~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~ 386 (393)
T 1erj_A 311 DFVLSVATTQNDEYILSGSKDRGVLFWDKKSG----NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 386 (393)
T ss_dssp SCEEEEEECGGGCEEEEEETTSEEEEEETTTC----CEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEE
T ss_pred CcEEEEEECCCCCEEEEEeCCCeEEEEECCCC----eEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECc
Confidence 99999999998 9999999999999999987 778889999999999 8876 677777555 55555554
No 23
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.7e-34 Score=242.91 Aligned_cols=229 Identities=17% Similarity=0.234 Sum_probs=189.5
Q ss_pred Cccccccc--eeEEecCC-Ce-eeccCCCcEEEEECCCCCCc----ccccceeeeeeeeeeeecCCce-EEeeCCCeEEE
Q 021744 63 AATANGAA--AKRFANNT-WG-RNNNFNNHSNNYRAGNSKNS----NINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHS 133 (308)
Q Consensus 63 ~~~gh~~~--~i~~s~~g-~~-~s~~~d~~i~vwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~i 133 (308)
.+.||.+. +++|+|++ ++ ++|+.|++|++|++...+.. .....+|...+..+.|++++.. ++++.|+.|++
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~ 91 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRL 91 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEE
Confidence 45789888 89999976 66 99999999999998643221 1234567778999999999976 89999999999
Q ss_pred EEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe-CCCeeEEEE--c------CCCEE
Q 021744 134 WTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN-LGGEVGCMI--S------EGPWI 204 (308)
Q Consensus 134 wd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-~~~~v~~~~--~------~~~~l 204 (308)
||+.++ +.+..+.+|...|.+++|+|++.+|++++.|++|++||++. +++..+. +...+.++. + ++..+
T Consensus 92 wd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l 169 (319)
T 3frx_A 92 WDVATG-ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLLGHNDWVSQVRVVPNEKADDDSVTI 169 (319)
T ss_dssp EETTTT-EEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECCC------CCEE
T ss_pred EECCCC-CeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEeccCCcEEEEEEccCCCCCCCccEE
Confidence 999999 88899999999999999999999999999999999999974 4555554 777777662 3 34467
Q ss_pred EEEc-CCcEEEEEcCCCcee-eeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-E
Q 021744 205 FIGV-TNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-H 279 (308)
Q Consensus 205 ~~~~-d~~i~~wd~~~~~~~-~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~ 279 (308)
++++ |+.|++||+++.+.. .+.+|...|.+++|+|+ +|++|+.||.|++||+.++ +.+..+..+ ..+.+ +
T Consensus 170 ~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~-~~v~~~~ 244 (319)
T 3frx_A 170 ISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAK----KAMYTLSAQ-DEVFSLA 244 (319)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTT----EEEEEEECC-SCEEEEE
T ss_pred EEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC----cEEEEecCC-CcEEEEE
Confidence 7665 999999999998877 78899999999999999 9999999999999999987 666777654 56777 9
Q ss_pred EecCCCeEEEeeceEEEEe
Q 021744 280 FSRDVTSLLGSVSFIMFIG 298 (308)
Q Consensus 280 ~s~d~~~l~~s~s~~i~~~ 298 (308)
|+|++.+|+++.+..+.++
T Consensus 245 ~sp~~~~la~~~~~~i~v~ 263 (319)
T 3frx_A 245 FSPNRYWLAAATATGIKVF 263 (319)
T ss_dssp ECSSSSEEEEEETTEEEEE
T ss_pred EcCCCCEEEEEcCCCcEEE
Confidence 9999999987774444433
No 24
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=8.2e-34 Score=248.24 Aligned_cols=257 Identities=13% Similarity=0.171 Sum_probs=207.4
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc-eeEEecCCCe-eeccCCCcEEEEECCCCCCcccc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA-AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNIN 103 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~-~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~ 103 (308)
+.++++++.|++|++|+..+. . ......+|... ..+++|++.+ ++++.|++|++||+.+++.. ..
T Consensus 68 g~~l~~~~~d~~v~i~d~~~~-----------~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-~~ 134 (420)
T 3vl1_A 68 GSHLYKARLDGHDFLFNTIIR-----------D-GSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQR-EI 134 (420)
T ss_dssp ETTEEEEEETTEEEEEECCSE-----------E-TTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEE-EE
T ss_pred CCeEEEEEcCCcEEEEEeccc-----------c-eeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCccee-ee
Confidence 678999999999999998876 1 11222344333 5578999999 99999999999999876554 23
Q ss_pred cceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCC
Q 021744 104 NRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG 182 (308)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~ 182 (308)
...|...+.++.|+|++.. ++++.|+.|++||+.++ +.+..+.+|...|.+++|+|++++|++++.|++|++||++++
T Consensus 135 ~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 213 (420)
T 3vl1_A 135 DQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG-SNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTG 213 (420)
T ss_dssp TTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-CCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT
T ss_pred cccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC-cCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCC
Confidence 3567788999999999976 89999999999999998 788899999999999999999999999999999999999999
Q ss_pred eEEEEEe----CCCeeEEE-----------------------EcCCCEEEEEc-CCcEEEEEcCCCcee-e-eeCCCCCE
Q 021744 183 QCAGVIN----LGGEVGCM-----------------------ISEGPWIFIGV-TNFVKAWNTQTNTDL-S-LSGPVGQV 232 (308)
Q Consensus 183 ~~~~~~~----~~~~v~~~-----------------------~~~~~~l~~~~-d~~i~~wd~~~~~~~-~-~~~~~~~v 232 (308)
+.+..+. +...+.++ .+++++|++++ |+.|++||+++++.. . ...|...|
T Consensus 214 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v 293 (420)
T 3vl1_A 214 TTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSC 293 (420)
T ss_dssp EEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCE
T ss_pred ceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCc
Confidence 9998887 22333332 25677888776 999999999998876 3 34588899
Q ss_pred EEEEEeCC---EEEEEcCCCeEEEEEcCCCCcccccceeccc-cCCCeEEEEecCCCeEEEee-ceEEEEee
Q 021744 233 YAMAVGND---LLFAGTQDGAILAWKFNVTTNCFEPAASLKV-HTDSNRAHFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 233 ~~~~~~~~---~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~v~~~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
.+++|+|+ +|++|+.||.|++||++++. .++..+.. |...+.+.+.+++.+|++++ +..+.++.
T Consensus 294 ~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~ 362 (420)
T 3vl1_A 294 NSLTVDGNNANYIYAGYENGMLAQWDLRSPE---CPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDI 362 (420)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTT---SCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEE
T ss_pred eeEEEeCCCCCEEEEEeCCCeEEEEEcCCCc---CchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEe
Confidence 99999998 89999999999999999863 44667766 66777775666787777655 55555544
No 25
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=7.3e-34 Score=258.45 Aligned_cols=254 Identities=19% Similarity=0.261 Sum_probs=211.9
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcc
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSN 101 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~ 101 (308)
.+..+++++.|++|++|+.... ....+.+|... +++|+|++.. ++++.|++|++||+...+..
T Consensus 273 d~~~l~~~~~d~~i~~w~~~~~-------------~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~- 338 (577)
T 2ymu_A 273 DGQTIASASDDKTVKLWNRNGQ-------------LLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQ- 338 (577)
T ss_dssp TSSEEEEEETTSCEEEEETTSC-------------EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEE-
T ss_pred CCCEEEEEeCCCEEEEEeCCCc-------------EEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeE-
Confidence 3578999999999999996533 12234567666 8999999999 99999999999998654332
Q ss_pred cccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCC
Q 021744 102 INNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCA 180 (308)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~ 180 (308)
....|...+..+.|+|++.. ++++.|+.|++||.. + +.+..+.+|...|.+++|+|++++|++++.|+.|++||.
T Consensus 339 -~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~-~-~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~- 414 (577)
T 2ymu_A 339 -TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-G-QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR- 414 (577)
T ss_dssp -EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-C-CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-
T ss_pred -EEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC-C-CEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-
Confidence 34556677899999999977 889999999999964 4 578889999999999999999999999999999999995
Q ss_pred CCeEEEEEe-CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCceeeeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEE
Q 021744 181 SGQCAGVIN-LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LLFAGTQDGAILAW 254 (308)
Q Consensus 181 ~~~~~~~~~-~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iw 254 (308)
+++.+..+. +...+.++ .+++++|++++ |+.|++||........+.+|...|++++|+|+ +|++++.|+.|++|
T Consensus 415 ~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw 494 (577)
T 2ymu_A 415 NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLW 494 (577)
T ss_dssp TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEE
T ss_pred CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEE
Confidence 466666666 77777766 57899999776 99999999865555588999999999999999 99999999999999
Q ss_pred EcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee-ceEEEEeecC
Q 021744 255 KFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV-SFIMFIGQNN 301 (308)
Q Consensus 255 d~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~~~~ 301 (308)
|... +++..+.+|...|++ +|+||+++|++++ +..|.++..+
T Consensus 495 ~~~~-----~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 495 NRNG-----QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp ETTS-----CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred cCCC-----CEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC
Confidence 9643 778889999999999 9999999999665 6666666543
No 26
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.1e-33 Score=241.32 Aligned_cols=231 Identities=13% Similarity=0.176 Sum_probs=194.4
Q ss_pred Cccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCC
Q 021744 63 AATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGD 138 (308)
Q Consensus 63 ~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~ 138 (308)
.+.+|... +++|+|++.+ ++|+.|++|++||+.+++... ....|...+..+.|+|++.. ++|+.|+.|++|++.+
T Consensus 50 ~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~ 128 (340)
T 1got_B 50 TLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVH-AIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT 128 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEE-EEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred eecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcce-EeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECcc
Confidence 45688888 8999999999 999999999999998776542 23445666899999999977 8899999999999986
Q ss_pred Cc---eeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe-CCCeeEEE--EcCCCEEEEEc-CCc
Q 021744 139 GF---KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN-LGGEVGCM--ISEGPWIFIGV-TNF 211 (308)
Q Consensus 139 ~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-~~~~v~~~--~~~~~~l~~~~-d~~ 211 (308)
.. +....+.+|.+.|.++.|++++ .+++++.|++|++||+++++.+..+. |...+.++ .++++++++++ |+.
T Consensus 129 ~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~ 207 (340)
T 1got_B 129 REGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDAS 207 (340)
T ss_dssp CSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCc
Confidence 52 3566788999999999999876 58999999999999999999998887 77778776 47888998876 999
Q ss_pred EEEEEcCCCcee-eeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceecc--ccCCCeEE-EEecCCC
Q 021744 212 VKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLK--VHTDSNRA-HFSRDVT 285 (308)
Q Consensus 212 i~~wd~~~~~~~-~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~v~~-~~s~d~~ 285 (308)
|++||+++++.. .+.+|...|++++|+|+ +|++|+.||.|++||+++. +.+..+. .+...+.+ +|+|+++
T Consensus 208 v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~----~~~~~~~~~~~~~~v~~~~~s~~g~ 283 (340)
T 1got_B 208 AKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD----QELMTYSHDNIICGITSVSFSKSGR 283 (340)
T ss_dssp EEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT----EEEEEECCTTCCSCEEEEEECTTSS
T ss_pred EEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC----cEEEEEccCCcccceEEEEECCCCC
Confidence 999999999877 78899999999999999 9999999999999999986 4444443 33457888 9999999
Q ss_pred eEEEee-ceEEEEee
Q 021744 286 SLLGSV-SFIMFIGQ 299 (308)
Q Consensus 286 ~l~~s~-s~~i~~~~ 299 (308)
+|++++ +..|.++.
T Consensus 284 ~l~~g~~d~~i~vwd 298 (340)
T 1got_B 284 LLLAGYDDFNCNVWD 298 (340)
T ss_dssp EEEEEETTSEEEEEE
T ss_pred EEEEECCCCeEEEEE
Confidence 998766 55555554
No 27
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.1e-34 Score=248.96 Aligned_cols=255 Identities=12% Similarity=0.114 Sum_probs=182.4
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccC------CCcEEEEECCC
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNF------NNHSNNYRAGN 96 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~------d~~i~vwd~~~ 96 (308)
.+++..++.+.....|+.... . ...|+.. +++|+|||.+ |+|+. |++|++|+..+
T Consensus 16 ~~~~~~~~g~~~~~~w~~p~~-----------~-----p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~ 79 (357)
T 4g56_B 16 ENLYFQSNGSSKGSAWGRPVT-----------A-----PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPE 79 (357)
T ss_dssp ----------------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC
T ss_pred cceEEecCCCccccccCCCCC-----------C-----cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCC
Confidence 345666666778888975433 1 2357666 8999999999 99987 77899999876
Q ss_pred CCCccc---ccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCcee---eeEeeCcccceEEEEEeCCCCEEEEeeC
Q 021744 97 SKNSNI---NNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKL---LTQLEGHQKVVSGITLPSGSDKLYSGSK 170 (308)
Q Consensus 97 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~---~~~~~~h~~~v~~~~~~~~~~~l~s~s~ 170 (308)
+.+... ....|...+..++|+|++.+++++.|+.|++||+.++... .....+|...|.+++|+|++++|++++.
T Consensus 80 ~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~ 159 (357)
T 4g56_B 80 GAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGK 159 (357)
T ss_dssp ---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEET
T ss_pred CCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeC
Confidence 654332 2245666699999999999999999999999999877311 2344589999999999999999999999
Q ss_pred CCcEEEEeCCCCeEEEEEe-CCCeeEEE--EcCCC-EEEEEc-CCcEEEEEcCCCcee---eeeCCCCCEEEEEEeCC--
Q 021744 171 DETVRVWDCASGQCAGVIN-LGGEVGCM--ISEGP-WIFIGV-TNFVKAWNTQTNTDL---SLSGPVGQVYAMAVGND-- 240 (308)
Q Consensus 171 dg~v~~wd~~~~~~~~~~~-~~~~v~~~--~~~~~-~l~~~~-d~~i~~wd~~~~~~~---~~~~~~~~v~~~~~~~~-- 240 (308)
|++|++||+++++++..+. |...+.++ .+++. ++++++ |+.|++||+++++.. ....+...+.+++|+|+
T Consensus 160 dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~ 239 (357)
T 4g56_B 160 DFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKD 239 (357)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTST
T ss_pred CCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhccc
Confidence 9999999999999999988 77788877 35543 555554 999999999998766 34456778999999987
Q ss_pred -EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCC-eEEEee-ceEEEEeec
Q 021744 241 -LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVT-SLLGSV-SFIMFIGQN 300 (308)
Q Consensus 241 -~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~-~l~~s~-s~~i~~~~~ 300 (308)
+|++|+.|+.|++||++++ +++..+..|...|++ +|+|++. +|++++ +..|.++..
T Consensus 240 ~~la~g~~d~~i~~wd~~~~----~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~ 299 (357)
T 4g56_B 240 DTFACGDETGNVSLVNIKNP----DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDA 299 (357)
T ss_dssp TEEEEEESSSCEEEEESSCG----GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECT
T ss_pred ceEEEeecccceeEEECCCC----cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEEC
Confidence 8999999999999999987 778889999999999 9999985 565444 555665543
No 28
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.1e-33 Score=240.33 Aligned_cols=268 Identities=13% Similarity=0.105 Sum_probs=206.2
Q ss_pred CCCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCc
Q 021744 24 GGGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNS 100 (308)
Q Consensus 24 ~~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~ 100 (308)
+.+.+|||||.|++|++||......... .....+.+|... +++|+|++.+ ++++.|+.|++|+.......
T Consensus 49 ~~~~~l~S~s~D~~i~vWd~~~~~~~~~-------~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~ 121 (340)
T 4aow_A 49 QFPDMILSASRDKTIIMWKLTRDETNYG-------IPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTT 121 (340)
T ss_dssp TCTTEEEEEETTSCEEEEEECCSSSCSE-------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCCcccc-------eeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeeccccee
Confidence 3467899999999999999876511100 011234677777 8999999999 99999999999999765433
Q ss_pred ccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCC--CEEEEeeCCCcEEEE
Q 021744 101 NINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGS--DKLYSGSKDETVRVW 177 (308)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~l~s~s~dg~v~~w 177 (308)
. ....+...+....+.+.+.. ++++.|+.+++||+.........+.+|...+..++|++++ .++++++.|++|++|
T Consensus 122 ~-~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~ 200 (340)
T 4aow_A 122 R-RFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 200 (340)
T ss_dssp E-EEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEE
T ss_pred e-eecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEE
Confidence 2 22233334666677777755 8899999999999987755566677899999999998765 568999999999999
Q ss_pred eCCCCeEEEEEe-CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCceeeeeCCCCCEEEEEEeCC-EEEEEcCCCeEE
Q 021744 178 DCASGQCAGVIN-LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND-LLFAGTQDGAIL 252 (308)
Q Consensus 178 d~~~~~~~~~~~-~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~-~l~~g~~dg~i~ 252 (308)
|+++++.+..+. +...+.++ .+++++|++++ |+.|++||+++.+.+....+...+.+++|+|+ .+++++.|+.|+
T Consensus 201 d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~ 280 (340)
T 4aow_A 201 NLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIK 280 (340)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEE
T ss_pred ECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEE
Confidence 999999998887 77788876 47899999876 99999999999988854445678999999999 778888899999
Q ss_pred EEEcCCCCccc-----ccceeccccCCCeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 253 AWKFNVTTNCF-----EPAASLKVHTDSNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 253 iwd~~~~~~~~-----~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
+||++.+.... ........|...|.+ +|+||+++|++++ +..|.+|.
T Consensus 281 iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~ 334 (340)
T 4aow_A 281 IWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQ 334 (340)
T ss_dssp EEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 99998752100 111223468889999 9999999999665 55555554
No 29
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=8.9e-34 Score=263.69 Aligned_cols=264 Identities=14% Similarity=0.170 Sum_probs=206.2
Q ss_pred CCCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCc
Q 021744 24 GGGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNS 100 (308)
Q Consensus 24 ~~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~ 100 (308)
+...+|+|+|.|++|++|+........ ......+.+|... +++|+|++++ ++|+.|++|+|||+.+++..
T Consensus 393 ~~~~~l~s~s~D~~i~~W~~~~~~~~~-------~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~ 465 (694)
T 3dm0_A 393 DNADIIVSASRDKSIILWKLTKDDKAY-------GVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVST 465 (694)
T ss_dssp TCCSEEEEEETTSEEEEEECCCSTTCS-------CEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CCCCEEEEEeCCCcEEEEEccCCCccc-------ccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcce
Confidence 345789999999999999987651100 0011235678777 8999999999 99999999999999877544
Q ss_pred ccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeE---eeCcccceEEEEEeCCC--CEEEEeeCCCcE
Q 021744 101 NINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQ---LEGHQKVVSGITLPSGS--DKLYSGSKDETV 174 (308)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~---~~~h~~~v~~~~~~~~~--~~l~s~s~dg~v 174 (308)
. ....|...+.++.|+|++.. ++++.|+.|++||.... ..... ..+|...|.+++|+|++ ..+++++.|++|
T Consensus 466 ~-~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v 543 (694)
T 3dm0_A 466 R-RFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGE-CKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTV 543 (694)
T ss_dssp E-EEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSC-EEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCE
T ss_pred e-EEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCC-cceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeE
Confidence 2 34567788999999999965 99999999999998765 22222 24789999999999986 579999999999
Q ss_pred EEEeCCCCeEEEEEe-CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCceeeeeCCCCCEEEEEEeCC-EEEEEcCCC
Q 021744 175 RVWDCASGQCAGVIN-LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND-LLFAGTQDG 249 (308)
Q Consensus 175 ~~wd~~~~~~~~~~~-~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~-~l~~g~~dg 249 (308)
++||+++++....+. |...+.++ .+++++|++++ |+.|++||+++++.+....+...+.+++|+|+ .+++++.++
T Consensus 544 ~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~ 623 (694)
T 3dm0_A 544 KVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEH 623 (694)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEETT
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcCC
Confidence 999999999988887 77788776 57899999877 99999999999988744445678999999999 555555677
Q ss_pred eEEEEEcCCCCcccccceecccc-------------------CCCeEE-EEecCCCeEEEee-ceEEEEeec
Q 021744 250 AILAWKFNVTTNCFEPAASLKVH-------------------TDSNRA-HFSRDVTSLLGSV-SFIMFIGQN 300 (308)
Q Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~-------------------~~~v~~-~~s~d~~~l~~s~-s~~i~~~~~ 300 (308)
.|++||++++ +.+..+..+ ...+++ +|+|||++|++++ +..|.+|.-
T Consensus 624 ~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 624 GIKIWDLESK----SIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGI 691 (694)
T ss_dssp EEEEEETTTT----EEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred CEEEEECCCC----CChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEec
Confidence 8999999986 444433321 123567 9999999999665 667766653
No 30
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.8e-34 Score=243.98 Aligned_cols=264 Identities=9% Similarity=0.053 Sum_probs=206.7
Q ss_pred CCCceEEecC---CCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecC---CCe-eeccCCCcEEEEECC
Q 021744 25 GGGLSTADTR---QKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANN---TWG-RNNNFNNHSNNYRAG 95 (308)
Q Consensus 25 ~~~~~~s~s~---d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~---g~~-~s~~~d~~i~vwd~~ 95 (308)
+..++++++. |++|++|+..++ ........+|... +++|+|+ +.+ ++++.|++|++||+.
T Consensus 30 ~~~l~~~~s~~~~d~~v~iw~~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 98 (357)
T 3i2n_A 30 SAKFVTMGNFARGTGVIQLYEIQHG-----------DLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLE 98 (357)
T ss_dssp SSEEEEEEC--CCCEEEEEEEECSS-----------SEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTT
T ss_pred CceEEEecCccCCCcEEEEEeCCCC-----------cccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCC
Confidence 3456778877 999999998876 1111222356555 8999998 577 999999999999998
Q ss_pred CCCCcccccceeeeeeeeee------eecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCccc----ceEEEE----EeC
Q 021744 96 NSKNSNINNRAVIKTDILCR------NWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQK----VVSGIT----LPS 160 (308)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~----~v~~~~----~~~ 160 (308)
+++........|...+..+. |++++.. ++++.|+.|++||+.++...+..+..|.+ .+.+++ |+|
T Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 178 (357)
T 3i2n_A 99 APEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQ 178 (357)
T ss_dssp SCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-
T ss_pred CCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCC
Confidence 87633344556777777774 5677765 88999999999999988446777766655 888998 788
Q ss_pred CCCEEEEeeCCCcEEEEeCCCCeEEEEEeCCCeeEEE--Ec---CCCEEEEEc-CCcEEEEEcCCCcee-ee-----eCC
Q 021744 161 GSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCM--IS---EGPWIFIGV-TNFVKAWNTQTNTDL-SL-----SGP 228 (308)
Q Consensus 161 ~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~~~~v~~~--~~---~~~~l~~~~-d~~i~~wd~~~~~~~-~~-----~~~ 228 (308)
+++++++++.|+.|++||+++++......+...+.++ .+ ++.++++++ |+.|++||+++++.. .+ .+|
T Consensus 179 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 258 (357)
T 3i2n_A 179 EERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAH 258 (357)
T ss_dssp CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECC
T ss_pred CCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCC
Confidence 9999999999999999999999988877788888877 35 788888776 999999999887654 33 389
Q ss_pred CCCEEEEEEeCC---EEEEEcCCCeEEEEEcCCCCcc---------------cccceeccccCCCeEE-EEecCCCeEE-
Q 021744 229 VGQVYAMAVGND---LLFAGTQDGAILAWKFNVTTNC---------------FEPAASLKVHTDSNRA-HFSRDVTSLL- 288 (308)
Q Consensus 229 ~~~v~~~~~~~~---~l~~g~~dg~i~iwd~~~~~~~---------------~~~~~~~~~~~~~v~~-~~s~d~~~l~- 288 (308)
...|++++|+|+ +|++++.||.|++||++.+... .+++..+..|...|.+ +|+|++++|+
T Consensus 259 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 338 (357)
T 3i2n_A 259 KSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCV 338 (357)
T ss_dssp SSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEE
T ss_pred cCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEE
Confidence 999999999998 6999999999999999865321 1356677889999999 9999999998
Q ss_pred Eee-ceEEEEee
Q 021744 289 GSV-SFIMFIGQ 299 (308)
Q Consensus 289 ~s~-s~~i~~~~ 299 (308)
+++ +..|.++.
T Consensus 339 s~~~d~~i~iw~ 350 (357)
T 3i2n_A 339 CSSFDQTVRVLI 350 (357)
T ss_dssp EEETTSEEEEEE
T ss_pred EecCCCcEEEEE
Confidence 444 55555554
No 31
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=6.3e-34 Score=246.29 Aligned_cols=257 Identities=13% Similarity=0.053 Sum_probs=203.0
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEec-CCCe-eeccCCCcEEEEECCCCCCcc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFAN-NTWG-RNNNFNNHSNNYRAGNSKNSN 101 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~-~g~~-~s~~~d~~i~vwd~~~~~~~~ 101 (308)
..++++++.|++|++||..+.. ........+|... +++|+| ++.+ ++++.|++|++||+......
T Consensus 86 ~~~l~s~~~dg~i~iwd~~~~~----------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~- 154 (383)
T 3ei3_B 86 PTTVAVGSKGGDIILWDYDVQN----------KTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQ- 154 (383)
T ss_dssp TTEEEEEEBTSCEEEEETTSTT----------CEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEE-
T ss_pred CCEEEEEcCCCeEEEEeCCCcc----------cceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceE-
Confidence 3799999999999999988761 0111122357666 899999 6677 99999999999999753221
Q ss_pred ccc--ceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCC-EEEEeeCCCcEEEE
Q 021744 102 INN--RAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSD-KLYSGSKDETVRVW 177 (308)
Q Consensus 102 ~~~--~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~dg~v~~w 177 (308)
... ..+...+.++.|++++.. ++++.|+.|++||+. + +.+..+.+|...|.+++|+|+++ ++++++.|++|++|
T Consensus 155 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~-~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw 232 (383)
T 3ei3_B 155 VFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-G-HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLW 232 (383)
T ss_dssp EEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-S-CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred EEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-C-CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEE
Confidence 111 222355889999999976 889999999999994 5 67888999999999999999998 89999999999999
Q ss_pred eCCC----CeEEEEEeCCCeeEEE--Ec-CCCEEEEEc-CCcEEEEEcCCCcee-eeeCCC-----------------CC
Q 021744 178 DCAS----GQCAGVINLGGEVGCM--IS-EGPWIFIGV-TNFVKAWNTQTNTDL-SLSGPV-----------------GQ 231 (308)
Q Consensus 178 d~~~----~~~~~~~~~~~~v~~~--~~-~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~~-----------------~~ 231 (308)
|+++ ++++..+.+...+.++ .+ ++++|++++ |+.|++||+++++.. .+..|. ..
T Consensus 233 d~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 312 (383)
T 3ei3_B 233 DLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYD 312 (383)
T ss_dssp EGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSS
T ss_pred eCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCC
Confidence 9998 6778888888888877 46 788998776 999999999988764 444332 34
Q ss_pred EEEEEEeCC-EEEEEcCCCeEEEEEcCCCCcccccceeccc--cCCCeEE-EEecCCCeEEEeeceEEEEeec
Q 021744 232 VYAMAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAASLKV--HTDSNRA-HFSRDVTSLLGSVSFIMFIGQN 300 (308)
Q Consensus 232 v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~v~~-~~s~d~~~l~~s~s~~i~~~~~ 300 (308)
+..++++|+ .+ +++.|+.|++||+.++ +++..+.. |...+.+ +|+|++++|+++++..|.++.-
T Consensus 313 ~~~~~~s~dg~~-s~s~d~~i~iwd~~~~----~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~sd~~i~iw~~ 380 (383)
T 3ei3_B 313 LIVAGRYPDDQL-LLNDKRTIDIYDANSG----GLVHQLRDPNAAGIISLNKFSPTGDVLASGMGFNILIWNR 380 (383)
T ss_dssp EEEEECBCCTTT-CTTCCCCEEEEETTTC----CEEEEECBTTBCSCCCEEEECTTSSEEEEEETTEEEEEEC
T ss_pred ceEEEecCCccc-ccCCCCeEEEEecCCC----ceeeeecCCCCCceEEEEEEecCccEEEEecCCcEEEEec
Confidence 445666666 33 7789999999999987 66777775 5678888 9999999999777767777654
No 32
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-33 Score=237.50 Aligned_cols=282 Identities=9% Similarity=0.010 Sum_probs=227.4
Q ss_pred ccCCCCceeEEEeecCCCCC-----CCCCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEe
Q 021744 3 FDAHGGNKRVFHRLGGGGGD-----GGGGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFA 75 (308)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s 75 (308)
.++.|...|.+.-.|+.... +..+.+|++++.|+.|++||..++ .....+.+|... +++|+
T Consensus 16 ~~~~G~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~------------~~~~~~~~h~~~v~~~~~~ 83 (369)
T 3zwl_B 16 LYFQGSHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNG------------ERLGTLDGHTGTIWSIDVD 83 (369)
T ss_dssp CCSSCCSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTC------------CEEEEECCCSSCEEEEEEC
T ss_pred eEEeccccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc------------hhhhhhhhcCCcEEEEEEc
Confidence 35667777776666666432 224679999999999999998876 112234567666 89999
Q ss_pred cCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCC-----CeEEEEEcCCCc--------
Q 021744 76 NNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKC-----KFLHSWTVGDGF-------- 140 (308)
Q Consensus 76 ~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d-----~~i~iwd~~~~~-------- 140 (308)
|++++ ++++.|++|++||+.+++.... ..+...+..+.|++++.. ++++.+ +.|++||+....
T Consensus 84 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~ 161 (369)
T 3zwl_B 84 CFTKYCVTGSADYSIKLWDVSNGQCVAT--WKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKV 161 (369)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEE--EECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEE--eecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeeccc
Confidence 99999 9999999999999988765532 235666899999999977 777777 999999997652
Q ss_pred --eeeeEeeCccc--ceEEEEEeCCCCEEEEeeCCCcEEEEeCCC-CeEEEEEe-CCCeeEEE--EcCCCEEEEEc-CCc
Q 021744 141 --KLLTQLEGHQK--VVSGITLPSGSDKLYSGSKDETVRVWDCAS-GQCAGVIN-LGGEVGCM--ISEGPWIFIGV-TNF 211 (308)
Q Consensus 141 --~~~~~~~~h~~--~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~-~~~~~~~~-~~~~v~~~--~~~~~~l~~~~-d~~ 211 (308)
.....+..|.. .+.+++|+|++++|++++.|+.|++||+++ .+.+..+. +...+.++ .+++++|++++ |+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 241 (369)
T 3zwl_B 162 SEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTN 241 (369)
T ss_dssp CSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCce
Confidence 13445566666 999999999999999999999999999998 78888877 67777766 47888888776 999
Q ss_pred EEEEEcCCCceeeeeCCCCCEEEEEEeCC--EEEEEcCCC--------------eEEEEEcCCCCcccccceeccccCCC
Q 021744 212 VKAWNTQTNTDLSLSGPVGQVYAMAVGND--LLFAGTQDG--------------AILAWKFNVTTNCFEPAASLKVHTDS 275 (308)
Q Consensus 212 i~~wd~~~~~~~~~~~~~~~v~~~~~~~~--~l~~g~~dg--------------~i~iwd~~~~~~~~~~~~~~~~~~~~ 275 (308)
|++||+++++......+...+.+++|+|+ ++++++.++ .+++||+.++ +++..+.+|...
T Consensus 242 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~----~~~~~~~~~~~~ 317 (369)
T 3zwl_B 242 SFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE----EEIGRVQGHFGP 317 (369)
T ss_dssp EEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTC----CEEEEEECCSSC
T ss_pred EEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCC----cchhheecccCc
Confidence 99999999988844447889999999999 888888888 8999999987 778888999999
Q ss_pred eEE-EEecCCCeEEEee-ceEEEEeecCc
Q 021744 276 NRA-HFSRDVTSLLGSV-SFIMFIGQNNK 302 (308)
Q Consensus 276 v~~-~~s~d~~~l~~s~-s~~i~~~~~~~ 302 (308)
|.+ +|+|++++|++++ +..|.++.-..
T Consensus 318 v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 318 LNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 999 9999999998666 66666665443
No 33
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.5e-33 Score=243.33 Aligned_cols=259 Identities=15% Similarity=0.118 Sum_probs=207.0
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCccc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNI 102 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~ 102 (308)
+..+++++.|+.|++|+..++. ........|... +++|+|++.+ ++|+.|+.|++||+.+++...
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~-----------~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~- 170 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGS-----------VSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLR- 170 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCC-----------EEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE-
T ss_pred CCCEEEEECCCeEEEeeCCCCc-----------EeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEE-
Confidence 3568889999999999998771 111111124444 8999999999 999999999999998776543
Q ss_pred ccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCC
Q 021744 103 NNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG 182 (308)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~ 182 (308)
....|...+.++.+.+ ..+++++.|+.|++||++.....+..+.+|...|.+++|+|++++|++++.|+.|++||++++
T Consensus 171 ~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 249 (401)
T 4aez_A 171 TMAGHQARVGCLSWNR-HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS 249 (401)
T ss_dssp EECCCSSCEEEEEEET-TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS
T ss_pred EecCCCCceEEEEECC-CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC
Confidence 3346667788888832 355899999999999999554778889999999999999999999999999999999999999
Q ss_pred eEEEEEe-CCCeeEEE--EcCC-CEEEEEc---CCcEEEEEcCCCceeeeeCCCCCEEEEEEeCC--EEEE--EcCCCeE
Q 021744 183 QCAGVIN-LGGEVGCM--ISEG-PWIFIGV---TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LLFA--GTQDGAI 251 (308)
Q Consensus 183 ~~~~~~~-~~~~v~~~--~~~~-~~l~~~~---d~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~--~l~~--g~~dg~i 251 (308)
+.+..+. +...+.++ .+++ .++++++ |+.|++||+++++......+...+.+++|+|+ ++++ |+.||.|
T Consensus 250 ~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i 329 (401)
T 4aez_A 250 IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNL 329 (401)
T ss_dssp SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEE
T ss_pred CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcE
Confidence 9988886 67777766 3544 5666653 89999999999988854457788999999999 7777 5589999
Q ss_pred EEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 252 LAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 252 ~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
++||+.++.. .....+.+|...|.+ +|+|++++|++++ +..|.++.
T Consensus 330 ~v~~~~~~~~--~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~ 377 (401)
T 4aez_A 330 SIWSYSSSGL--TKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWR 377 (401)
T ss_dssp EEEEEETTEE--EEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEE
T ss_pred EEEecCCccc--eeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 9999998632 444557789999999 9999999998665 55555554
No 34
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.5e-33 Score=232.33 Aligned_cols=252 Identities=13% Similarity=0.146 Sum_probs=203.8
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCc--
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNS-- 100 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~-- 100 (308)
+.++++++.|++|++||.... .......+|... +++|+|++.+ ++++.|+.|++|++......
T Consensus 29 ~~~l~s~~~dg~v~vw~~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~ 96 (313)
T 3odt_A 29 DSKVASVSRDGTVRLWSKDDQ------------WLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDP 96 (313)
T ss_dssp TTEEEEEETTSEEEEEEESSS------------EEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC
T ss_pred CCEEEEEEcCCcEEEEECCCC------------EEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCc
Confidence 568999999999999998765 112223345555 8999999999 99999999999999654322
Q ss_pred ccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeC-CCCEEEEeeCCCcEEEEeC
Q 021744 101 NINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPS-GSDKLYSGSKDETVRVWDC 179 (308)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~dg~v~~wd~ 179 (308)
......|...+..+.+ .....++++.|+.|++|| .. +....+..|...+.+++|.| +++++++++.|+.|++||
T Consensus 97 ~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~i~~~d--~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d- 171 (313)
T 3odt_A 97 LYTLIGHQGNVCSLSF-QDGVVISGSWDKTAKVWK--EG-SLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ- 171 (313)
T ss_dssp -CEECCCSSCEEEEEE-ETTEEEEEETTSEEEEEE--TT-EEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE-
T ss_pred ccchhhcccCEEEEEe-cCCEEEEEeCCCCEEEEc--CC-cEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe-
Confidence 2233456666877777 334559999999999999 44 67888899999999999988 899999999999999999
Q ss_pred CCCeEEEEEe--CCCeeEEE--EcCCCEEEEE-cCCcEEEEEcCCCcee-eeeCCCCCEEEEEEeCC-EEEEEcCCCeEE
Q 021744 180 ASGQCAGVIN--LGGEVGCM--ISEGPWIFIG-VTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND-LLFAGTQDGAIL 252 (308)
Q Consensus 180 ~~~~~~~~~~--~~~~v~~~--~~~~~~l~~~-~d~~i~~wd~~~~~~~-~~~~~~~~v~~~~~~~~-~l~~g~~dg~i~ 252 (308)
..+.+..+. +...+.++ .+++. ++++ .|+.|++||+++++.+ .+..|...|++++|+|+ .|++++.||.|+
T Consensus 172 -~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~ 249 (313)
T 3odt_A 172 -NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVR 249 (313)
T ss_dssp -TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEE
T ss_pred -cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEE
Confidence 456666665 66667766 46666 5554 5999999999999887 78889999999999999 999999999999
Q ss_pred EEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEeeceEEEEeec
Q 021744 253 AWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSVSFIMFIGQN 300 (308)
Q Consensus 253 iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~s~~i~~~~~ 300 (308)
+||++++ +++..+..|...+.+ +|+|++++++++.+..|.++.-
T Consensus 250 iwd~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~ 294 (313)
T 3odt_A 250 IWSKENG----SLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQ 294 (313)
T ss_dssp EECTTTC----CEEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEES
T ss_pred EEECCCC----ceeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEeC
Confidence 9999987 778888899999999 9999999776666666665553
No 35
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-33 Score=245.97 Aligned_cols=263 Identities=11% Similarity=0.130 Sum_probs=208.6
Q ss_pred CCCCCceEEe----------cCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcE
Q 021744 23 GGGGGLSTAD----------TRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHS 89 (308)
Q Consensus 23 ~~~~~~~~s~----------s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i 89 (308)
.++..+++++ +.|++|++|+...+... .......|... +++|+|++.+ ++++.|++|
T Consensus 22 p~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~----------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v 91 (416)
T 2pm9_A 22 HDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE----------KPIASLQVDSKFNDLDWSHNNKIIAGALDNGSL 91 (416)
T ss_dssp SSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC----------SCSCCCCCSSCEEEEEECSSSSCEEEEESSSCE
T ss_pred CCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCC----------cEEEEEecCCceEEEEECCCCCeEEEEccCCeE
Confidence 3444589998 89999999998876110 11111234444 8999999999 999999999
Q ss_pred EEEECCC---CCCcccccceeeeeeeeeeeecC-Cce-EEeeCCCeEEEEEcCCCc------e--eeeEeeCcccceEEE
Q 021744 90 NNYRAGN---SKNSNINNRAVIKTDILCRNWVQ-GNC-MYGEKCKFLHSWTVGDGF------K--LLTQLEGHQKVVSGI 156 (308)
Q Consensus 90 ~vwd~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~g~~d~~i~iwd~~~~~------~--~~~~~~~h~~~v~~~ 156 (308)
++||+.+ +.........|...+.++.|+|+ +.. ++++.|+.|++||+.+.. . ....+.+|...|.++
T Consensus 92 ~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 171 (416)
T 2pm9_A 92 ELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISL 171 (416)
T ss_dssp EEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEE
T ss_pred EEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEE
Confidence 9999976 22233345567778999999998 554 889999999999998873 1 122346799999999
Q ss_pred EEeCC-CCEEEEeeCCCcEEEEeCCCCeEEEEEeC-------CCeeEEE--EcCC-CEEEEEc-CC---cEEEEEcCCC-
Q 021744 157 TLPSG-SDKLYSGSKDETVRVWDCASGQCAGVINL-------GGEVGCM--ISEG-PWIFIGV-TN---FVKAWNTQTN- 220 (308)
Q Consensus 157 ~~~~~-~~~l~s~s~dg~v~~wd~~~~~~~~~~~~-------~~~v~~~--~~~~-~~l~~~~-d~---~i~~wd~~~~- 220 (308)
+|+|+ +.++++++.|+.|++||+++++.+..+.. ...+.++ .+++ .++++++ ++ .|++||++++
T Consensus 172 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~ 251 (416)
T 2pm9_A 172 AWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN 251 (416)
T ss_dssp EECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT
T ss_pred EeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC
Confidence 99998 78999999999999999999999988884 5667766 3565 5777766 77 9999999986
Q ss_pred cee-eee-CCCCCEEEEEEeC-C--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCC-CeEEEee-c
Q 021744 221 TDL-SLS-GPVGQVYAMAVGN-D--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDV-TSLLGSV-S 292 (308)
Q Consensus 221 ~~~-~~~-~~~~~v~~~~~~~-~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~-~~l~~s~-s 292 (308)
+.. .+. +|...|.+++|+| + +|++++.||.|++||++++ +++..+..|...+.+ +|+|++ .+|++++ +
T Consensus 252 ~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~----~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d 327 (416)
T 2pm9_A 252 TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA----EQLSQFPARGNWCFKTKFAPEAPDLFACASFD 327 (416)
T ss_dssp SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC----CEEEEEECSSSCCCCEEECTTCTTEEEECCSS
T ss_pred CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC----ccceeecCCCCceEEEEECCCCCCEEEEEecC
Confidence 344 666 8999999999999 5 9999999999999999987 778889999999999 999999 6777554 5
Q ss_pred eEEEEee
Q 021744 293 FIMFIGQ 299 (308)
Q Consensus 293 ~~i~~~~ 299 (308)
..|.++.
T Consensus 328 ~~i~iw~ 334 (416)
T 2pm9_A 328 NKIEVQT 334 (416)
T ss_dssp SEEEEEE
T ss_pred CcEEEEE
Confidence 5555554
No 36
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6.9e-33 Score=237.61 Aligned_cols=232 Identities=12% Similarity=0.160 Sum_probs=191.8
Q ss_pred Cccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCC
Q 021744 63 AATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGD 138 (308)
Q Consensus 63 ~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~ 138 (308)
.+.||... +++|+|++.+ ++|+.|++|++||..+++... ....+...+..+.|+|++.. ++|+.|+.+++|++..
T Consensus 59 ~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~-~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~ 137 (354)
T 2pbi_B 59 TLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEH-AVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTF 137 (354)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE-EEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCC
T ss_pred EecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcce-EEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEec
Confidence 45689888 9999999999 999999999999997765432 22334556899999999977 8899999999999864
Q ss_pred C-----ceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe-CCCeeEEE--Ec--CCCEEEEEc
Q 021744 139 G-----FKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN-LGGEVGCM--IS--EGPWIFIGV 208 (308)
Q Consensus 139 ~-----~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-~~~~v~~~--~~--~~~~l~~~~ 208 (308)
. ......+.+|...|.+++|+|++..|++++.|++|++||+++++++..+. |...+.++ .+ ++++|++|+
T Consensus 138 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs 217 (354)
T 2pbi_B 138 DKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGG 217 (354)
T ss_dssp CTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEE
T ss_pred cccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEe
Confidence 3 13456778899999999999999999999999999999999999999988 77777766 23 467888776
Q ss_pred -CCcEEEEEcCCCcee-eeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccc--cCCCeEE-EEe
Q 021744 209 -TNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKV--HTDSNRA-HFS 281 (308)
Q Consensus 209 -d~~i~~wd~~~~~~~-~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~v~~-~~s 281 (308)
|+.|++||++++++. .+..|...|++++|+|+ +|++|+.|+.|++||++.. +.+..+.. +...+.+ +|+
T Consensus 218 ~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~----~~~~~~~~~~~~~~~~~~~~s 293 (354)
T 2pbi_B 218 CDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD----REVAIYSKESIIFGASSVDFS 293 (354)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT----EEEEEECCTTCCSCEEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC----cEEEEEcCCCcccceeEEEEe
Confidence 999999999999887 78899999999999998 9999999999999999986 44444433 3346777 999
Q ss_pred cCCCeEEEee-ceEEEEee
Q 021744 282 RDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 282 ~d~~~l~~s~-s~~i~~~~ 299 (308)
|++.+|++++ +..|.++.
T Consensus 294 ~~g~~l~~g~~d~~i~vwd 312 (354)
T 2pbi_B 294 LSGRLLFAGYNDYTINVWD 312 (354)
T ss_dssp TTSSEEEEEETTSCEEEEE
T ss_pred CCCCEEEEEECCCcEEEEE
Confidence 9999998766 44444444
No 37
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-34 Score=258.43 Aligned_cols=266 Identities=7% Similarity=-0.032 Sum_probs=189.2
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecC------CCe-eeccCCCcEEEEECCC
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANN------TWG-RNNNFNNHSNNYRAGN 96 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~------g~~-~s~~~d~~i~vwd~~~ 96 (308)
+..+|+++.|++|++|+...+. +... ....+.+|.+. .++|+|+ +.+ |+++.|++|+|||+..
T Consensus 173 ~~~laS~s~D~tI~iWd~~~~~---~~~~-----~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~ 244 (524)
T 2j04_B 173 LEMFDKEKHSSCIQIFKMNTST---LHCV-----KVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIID 244 (524)
T ss_dssp ---------CEEEEEEEEETTT---CCEE-----EEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCC
T ss_pred hhhhccCCCCceEEEEEccCCC---CCce-----EEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCC
Confidence 4578899999999999987651 0000 00112345444 7999997 467 9999999999999976
Q ss_pred CCCcc----------cccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCcccceEEE--EEeCCC-C
Q 021744 97 SKNSN----------INNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGI--TLPSGS-D 163 (308)
Q Consensus 97 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~--~~~~~~-~ 163 (308)
++... .....|...+.++.|++++.+++|+.||+|++||++++..+...+.+|...|.++ +|+|++ .
T Consensus 245 ~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~ 324 (524)
T 2j04_B 245 NATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDT 324 (524)
T ss_dssp CSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCC
T ss_pred CccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCe
Confidence 64220 1223455668999999887779999999999999997644566789999999999 567887 8
Q ss_pred EEEEeeCCCcEEEEeCCCCeEEEEEe-CC--Cee--EEEEcCCCEEEEEc-CCcEEEEEcCCCcee-eeeCCCCCEEEEE
Q 021744 164 KLYSGSKDETVRVWDCASGQCAGVIN-LG--GEV--GCMISEGPWIFIGV-TNFVKAWNTQTNTDL-SLSGPVGQVYAMA 236 (308)
Q Consensus 164 ~l~s~s~dg~v~~wd~~~~~~~~~~~-~~--~~v--~~~~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~~~~v~~~~ 236 (308)
+|+|++.|++|++||+++++++..+. +. ..+ .++.|+++.+++++ |++|++||++++.+. .+.+|...|++++
T Consensus 325 ~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva 404 (524)
T 2j04_B 325 VVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIG 404 (524)
T ss_dssp EEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEE
T ss_pred EEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEE
Confidence 99999999999999999887766654 22 224 34468888888776 889999999998875 7889999999999
Q ss_pred EeCC--EEEEEcCCCeEEEEEcCCCCcc----------------------------------------cccceeccccCC
Q 021744 237 VGND--LLFAGTQDGAILAWKFNVTTNC----------------------------------------FEPAASLKVHTD 274 (308)
Q Consensus 237 ~~~~--~l~~g~~dg~i~iwd~~~~~~~----------------------------------------~~~~~~~~~~~~ 274 (308)
|+|+ +|++|+.||+|++||+...... ...+..+.+|..
T Consensus 405 ~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~ 484 (524)
T 2j04_B 405 VSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGI 484 (524)
T ss_dssp CCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCC
T ss_pred eCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCc
Confidence 9999 8999999999999985321000 012234456788
Q ss_pred CeEE-EEecCCC---eEEEee-ceEEEEee
Q 021744 275 SNRA-HFSRDVT---SLLGSV-SFIMFIGQ 299 (308)
Q Consensus 275 ~v~~-~~s~d~~---~l~~s~-s~~i~~~~ 299 (308)
.|.+ +|+|++. +++++. +..|.++.
T Consensus 485 ~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~ 514 (524)
T 2j04_B 485 NITCTKWNETSAGGKCYAFSNSAGLLTLEY 514 (524)
T ss_dssp SCCCEEECCSTTTTTEEEEECTTSEEEEEE
T ss_pred eEEEEECCCCCCccHHHHhhccCceEEEEE
Confidence 8888 9999964 666555 45565554
No 38
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.3e-33 Score=245.12 Aligned_cols=261 Identities=10% Similarity=0.063 Sum_probs=209.1
Q ss_pred CceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecC----C---Ce-eeccCCCcEEEEECCC
Q 021744 27 GLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANN----T---WG-RNNNFNNHSNNYRAGN 96 (308)
Q Consensus 27 ~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~----g---~~-~s~~~d~~i~vwd~~~ 96 (308)
.+|++++.|++|++|+......... .+....+.+|... +++|+|+ + .+ ++++.|++|++||+.+
T Consensus 27 ~~l~s~~~dg~i~iw~~~~~~~~~~------~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~ 100 (397)
T 1sq9_A 27 SFTVSCSGDGYLKVWDNKLLDNENP------KDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITR 100 (397)
T ss_dssp SEEEEEETTSEEEEEESBCCTTCCG------GGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEE
T ss_pred CeEEEEcCCCEEEEEECCCcccccC------CCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccC
Confidence 6899999999999999887621000 0112233467666 8999999 8 88 9999999999999987
Q ss_pred CCCc----cccccee-----eeeeeeeeee----cCCc--eEEeeCCCeEEEEEcCC------Cceeee-----Ee----
Q 021744 97 SKNS----NINNRAV-----IKTDILCRNW----VQGN--CMYGEKCKFLHSWTVGD------GFKLLT-----QL---- 146 (308)
Q Consensus 97 ~~~~----~~~~~~~-----~~~~~~~~~~----~~~~--~~~g~~d~~i~iwd~~~------~~~~~~-----~~---- 146 (308)
++.. ......| ...+..+.|+ +++. +++++.|+.|++||+.+ . +.+. .+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~ 179 (397)
T 1sq9_A 101 EDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS-LTLNWSPTLELQGTV 179 (397)
T ss_dssp CTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH-TTTCCCCEEEEEEEE
T ss_pred CcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc-ceeeccCcceeeeee
Confidence 6641 1233344 4669999999 8885 57888999999999988 5 4444 66
Q ss_pred ---eCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEeC-------CCeeEEE--EcCCCEEEEEc-C---C
Q 021744 147 ---EGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINL-------GGEVGCM--ISEGPWIFIGV-T---N 210 (308)
Q Consensus 147 ---~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~-------~~~v~~~--~~~~~~l~~~~-d---~ 210 (308)
..|...|.+++|+|++ ++++++.|+.|++||+++++.+..+.. ...+.++ .+++++|++++ | +
T Consensus 180 ~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g 258 (397)
T 1sq9_A 180 ESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFG 258 (397)
T ss_dssp CCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEE
T ss_pred ccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCc
Confidence 3488999999999999 999999999999999999999988885 7777776 47889999876 7 8
Q ss_pred cEEEEEcCCCcee-eeeC-------------CCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceecc----
Q 021744 211 FVKAWNTQTNTDL-SLSG-------------PVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLK---- 270 (308)
Q Consensus 211 ~i~~wd~~~~~~~-~~~~-------------~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~---- 270 (308)
.|++||+++++.. .+.. |...|.+++|+|+ +|++++.||.|++||++++ +++..+.
T Consensus 259 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~ 334 (397)
T 1sq9_A 259 CITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK----ERITTLNMHCD 334 (397)
T ss_dssp EEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT----EEEEEEECCGG
T ss_pred eEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC----ceeEEEecccC
Confidence 9999999998877 6777 8999999999998 9999999999999999987 6777777
Q ss_pred --cc---------------CCCeEE-EEecCC----------CeEEEee-ceEEEEee
Q 021744 271 --VH---------------TDSNRA-HFSRDV----------TSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 271 --~~---------------~~~v~~-~~s~d~----------~~l~~s~-s~~i~~~~ 299 (308)
.| ...|.+ +|+|++ .+|++++ +..|.++.
T Consensus 335 ~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~ 392 (397)
T 1sq9_A 335 DIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR 392 (397)
T ss_dssp GCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred cccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence 77 899999 999998 6777555 55555554
No 39
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-33 Score=248.57 Aligned_cols=261 Identities=11% Similarity=0.084 Sum_probs=195.4
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCC-CCccccccc--eeEEecCCCe-eeccCCCcEEEEECC---CC
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLP-PAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAG---NS 97 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~-~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~---~~ 97 (308)
.+.+||+++.|++|++||....... .... ....+|... +++|+|++.+ ++++.|++|++||++ ++
T Consensus 75 ~~~~l~s~s~dg~v~vwd~~~~~~~--------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~ 146 (437)
T 3gre_A 75 ETPYLITGSDQGVIKIWNLKEIIVG--------EVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQE 146 (437)
T ss_dssp SSCEEEEEETTSEEEEEEHHHHHTT--------CCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEET
T ss_pred CCCEEEEecCCceEEEeECcccccC--------cccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCC
Confidence 4679999999999999998762000 1111 111146666 8999999999 999999999999994 33
Q ss_pred CCcccccce-----------eeeeeeeee--eecCCce-EEeeCCCeEEEEEcCCCceeeeEeeC--cccceEEEEEeCC
Q 021744 98 KNSNINNRA-----------VIKTDILCR--NWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEG--HQKVVSGITLPSG 161 (308)
Q Consensus 98 ~~~~~~~~~-----------~~~~~~~~~--~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~--h~~~v~~~~~~~~ 161 (308)
+........ +...+.++. +.+++.. ++++.|+.|++||++++ +.+..+.+ |...|++++|+|+
T Consensus 147 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~h~~~v~~~~~s~~ 225 (437)
T 3gre_A 147 SEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTL-ERLQIIENSPRHGAVSSICIDEE 225 (437)
T ss_dssp TEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTC-CEEEEEECCGGGCCEEEEEECTT
T ss_pred ceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC-eeeEEEccCCCCCceEEEEECCC
Confidence 322110000 112233333 3355655 88999999999999998 78888988 8999999999999
Q ss_pred CCEEEEeeCCCcEEEEeCCCCeEEEEEe--CCCeeEEEE------cCCCEEEEEc-CCcEEEEEcCCCcee-eeeC----
Q 021744 162 SDKLYSGSKDETVRVWDCASGQCAGVIN--LGGEVGCMI------SEGPWIFIGV-TNFVKAWNTQTNTDL-SLSG---- 227 (308)
Q Consensus 162 ~~~l~s~s~dg~v~~wd~~~~~~~~~~~--~~~~v~~~~------~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~---- 227 (308)
+.+|++++.||+|++||+++++++..+. +...+.++. +++++|++++ |+.|++||+++++.. .+.+
T Consensus 226 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 305 (437)
T 3gre_A 226 CCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQ 305 (437)
T ss_dssp SCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSC
T ss_pred CCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCC
Confidence 9999999999999999999999999885 556777762 3566888887 899999999988765 3332
Q ss_pred ----------------------CCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCCCcccccceeccc-------------
Q 021744 228 ----------------------PVGQVYAMAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAASLKV------------- 271 (308)
Q Consensus 228 ----------------------~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~------------- 271 (308)
|...|++++|++. +|++|+.|+.|++||+.++ +.+..+.+
T Consensus 306 ~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~----~~~~~~~~~~~~~~~~~~~~~ 381 (437)
T 3gre_A 306 PSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNEL----SSSKAVISPSRFSDVFIPTQV 381 (437)
T ss_dssp CCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCG----GGCEEEECC--CCCEEEEEEE
T ss_pred CccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCc----ccceEEecccccCceEEEEEe
Confidence 5566899999966 9999999999999999987 44444433
Q ss_pred ------------------------cCCCeEE-EEecC--CCeEEEee-ceEEEEe
Q 021744 272 ------------------------HTDSNRA-HFSRD--VTSLLGSV-SFIMFIG 298 (308)
Q Consensus 272 ------------------------~~~~v~~-~~s~d--~~~l~~s~-s~~i~~~ 298 (308)
|...|.+ +|+++ +.+|+++. +..|.++
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw 436 (437)
T 3gre_A 382 TANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIF 436 (437)
T ss_dssp ETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEE
T ss_pred ecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEe
Confidence 8889999 99988 66666544 5555554
No 40
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.4e-33 Score=239.56 Aligned_cols=235 Identities=14% Similarity=0.155 Sum_probs=187.8
Q ss_pred cccccc-c--eeEEecCCCe-eeccCCCcEEEEECCCCCCccc--ccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEc
Q 021744 64 ATANGA-A--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNI--NNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTV 136 (308)
Q Consensus 64 ~~gh~~-~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~ 136 (308)
+.+|.. . .++|+|+|.+ |+|+.|++|+|||++++..... ...+|...+..+.|+|++.. ++|+.|+.|++|++
T Consensus 11 ~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~ 90 (345)
T 3fm0_A 11 VPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKK 90 (345)
T ss_dssp ECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred ecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEc
Confidence 446665 3 8999999999 9999999999999976643221 23567778999999999976 89999999999999
Q ss_pred CCCc-eeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCe---EEEEEe-CCCeeEEE--EcCCCEEEEEc-
Q 021744 137 GDGF-KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQ---CAGVIN-LGGEVGCM--ISEGPWIFIGV- 208 (308)
Q Consensus 137 ~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~---~~~~~~-~~~~v~~~--~~~~~~l~~~~- 208 (308)
.+.. +.+..+.+|...|.+++|+|++++|++++.|++|++||+++++ ++..+. +...+.++ .|++++|++++
T Consensus 91 ~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~ 170 (345)
T 3fm0_A 91 NQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASY 170 (345)
T ss_dssp CCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEET
T ss_pred cCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeC
Confidence 8663 4577889999999999999999999999999999999998764 344444 66777766 47888888776
Q ss_pred CCcEEEEEcCCCcee---eeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCc-----------ccccceeccc-
Q 021744 209 TNFVKAWNTQTNTDL---SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTN-----------CFEPAASLKV- 271 (308)
Q Consensus 209 d~~i~~wd~~~~~~~---~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~-----------~~~~~~~~~~- 271 (308)
|+.|++||+++++.. .+.+|...|++++|+|+ +|++++.|+.|++||...... ..+++..+.+
T Consensus 171 d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (345)
T 3fm0_A 171 DDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGF 250 (345)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSS
T ss_pred CCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCC
Confidence 999999999887533 68899999999999999 999999999999999754321 0122334443
Q ss_pred cCCCeEE-EEecCCCeEEEee-ceEEEEe
Q 021744 272 HTDSNRA-HFSRDVTSLLGSV-SFIMFIG 298 (308)
Q Consensus 272 ~~~~v~~-~~s~d~~~l~~s~-s~~i~~~ 298 (308)
|...|.. +|+|++..|++++ +..+.++
T Consensus 251 h~~~v~~v~~~~~~~~l~s~~~d~~i~vw 279 (345)
T 3fm0_A 251 HSRTIYDIAWCQLTGALATACGDDAIRVF 279 (345)
T ss_dssp CSSCEEEEEECTTTCCEEEEETTSCEEEE
T ss_pred CCCcEEEEEEecCCCEEEEEeCCCeEEEE
Confidence 8889999 9999999988665 4444433
No 41
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.8e-33 Score=243.45 Aligned_cols=230 Identities=14% Similarity=0.228 Sum_probs=187.0
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCC-e-eeccCCCcEEEEECCCCCCc
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTW-G-RNNNFNNHSNNYRAGNSKNS 100 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~-~-~s~~~d~~i~vwd~~~~~~~ 100 (308)
.+.++|+++.|++|++|+....... ....+....+.+|... ++.|.|++. . ++|+.|++|++||+.+++.+
T Consensus 119 ~g~~las~~~d~~v~iw~~~~~~~~-----~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~ 193 (380)
T 3iz6_a 119 NGQSVACGGLDSACSIFNLSSQADR-----DGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRI 193 (380)
T ss_dssp TSSEEEECCSSSCCEEEECCCCSSC-----CCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEE
T ss_pred CCCEEEEeeCCCcEEEEECCCCccc-----cCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEE
Confidence 3678999999999999998754110 0112334456788877 788998754 4 99999999999999888654
Q ss_pred ccc----cceeeeeeeeeeeec-CCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcE
Q 021744 101 NIN----NRAVIKTDILCRNWV-QGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETV 174 (308)
Q Consensus 101 ~~~----~~~~~~~~~~~~~~~-~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v 174 (308)
... ...|...+..+.+.+ ++.. ++|+.|+.|++||++...+.+..+.+|...|.+++|+|++++|++++.|++|
T Consensus 194 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i 273 (380)
T 3iz6_a 194 SIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTC 273 (380)
T ss_dssp EEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCE
T ss_pred EEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeE
Confidence 322 245666788888876 5544 8999999999999985446788999999999999999999999999999999
Q ss_pred EEEeCCCCeEEEEEeCCC--------eeEE--EEcCCCEEEEEc-CCcEEEEEcCCCcee-ee----eCCCCCEEEEEEe
Q 021744 175 RVWDCASGQCAGVINLGG--------EVGC--MISEGPWIFIGV-TNFVKAWNTQTNTDL-SL----SGPVGQVYAMAVG 238 (308)
Q Consensus 175 ~~wd~~~~~~~~~~~~~~--------~v~~--~~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~----~~~~~~v~~~~~~ 238 (308)
++||+++++++..+.... .+.+ +.+++++|++|+ |+.|++||+.+++.. .+ .+|...|++++|+
T Consensus 274 ~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s 353 (380)
T 3iz6_a 274 RLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLS 353 (380)
T ss_dssp EEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEEC
T ss_pred EEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEEC
Confidence 999999999998886221 1333 358899999887 999999999988776 44 5799999999999
Q ss_pred CC--EEEEEcCCCeEEEEEcCCC
Q 021744 239 ND--LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 239 ~~--~l~~g~~dg~i~iwd~~~~ 259 (308)
|+ +|++|+.|+.|++|++...
T Consensus 354 ~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 354 SDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp SSSSEEEEECTTSCEEEEECCSS
T ss_pred CCCCEEEEeeCCCCEEEEecCCC
Confidence 99 9999999999999999875
No 42
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.3e-33 Score=236.78 Aligned_cols=231 Identities=12% Similarity=0.132 Sum_probs=182.5
Q ss_pred Cccccccc--eeEE-----ec-CCCe-eeccCCCcEEEEECCCCCCc------ccccceeeeeeeeeeeecCCce-EEee
Q 021744 63 AATANGAA--AKRF-----AN-NTWG-RNNNFNNHSNNYRAGNSKNS------NINNRAVIKTDILCRNWVQGNC-MYGE 126 (308)
Q Consensus 63 ~~~gh~~~--~i~~-----s~-~g~~-~s~~~d~~i~vwd~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~g~ 126 (308)
.+.||... +++| ++ ++.+ ++|+.|++|++||+...+.. .....+|...+..+.|++++.. ++++
T Consensus 16 ~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s 95 (343)
T 2xzm_R 16 ILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSS 95 (343)
T ss_dssp EEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEE
T ss_pred eeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEc
Confidence 45688887 8888 66 8888 99999999999999754321 1234567777999999999976 8999
Q ss_pred CCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEE---eCCCeeEEE--EcCC
Q 021744 127 KCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVI---NLGGEVGCM--ISEG 201 (308)
Q Consensus 127 ~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~---~~~~~v~~~--~~~~ 201 (308)
.|+.|++||++++ +.+..+.+|...|.+++|+|++++|++++.|++|++||+......... .+...+.++ .+++
T Consensus 96 ~D~~v~lwd~~~~-~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 174 (343)
T 2xzm_R 96 WDKTLRLWDLRTG-TTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIM 174 (343)
T ss_dssp TTSEEEEEETTSS-CEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCC
T ss_pred CCCcEEEEECCCC-cEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeecccc
Confidence 9999999999998 788899999999999999999999999999999999999844333222 245566666 2443
Q ss_pred ----------CEEEEEc-CCcEEEEEcCCCceeeeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCccccccee
Q 021744 202 ----------PWIFIGV-TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAAS 268 (308)
Q Consensus 202 ----------~~l~~~~-d~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~ 268 (308)
.++++++ |+.|++||........+.+|...|.+++|+|+ +|++|+.||.|++||+.... .+...
T Consensus 175 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~---~~~~~ 251 (343)
T 2xzm_R 175 KSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLT---YPQRE 251 (343)
T ss_dssp CSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCS---SCSEE
T ss_pred ccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCc---cccee
Confidence 6788766 99999999554444478899999999999999 99999999999999996532 33333
Q ss_pred ccccCCCeEE-EEecCCCeEEEeeceEEEEe
Q 021744 269 LKVHTDSNRA-HFSRDVTSLLGSVSFIMFIG 298 (308)
Q Consensus 269 ~~~~~~~v~~-~~s~d~~~l~~s~s~~i~~~ 298 (308)
+ .+...+.+ +|+|++.+++++.+..+.++
T Consensus 252 ~-~~~~~v~~v~~sp~~~~la~~~d~~v~iw 281 (343)
T 2xzm_R 252 F-DAGSTINQIAFNPKLQWVAVGTDQGVKIF 281 (343)
T ss_dssp E-ECSSCEEEEEECSSSCEEEEEESSCEEEE
T ss_pred e-cCCCcEEEEEECCCCCEEEEECCCCEEEE
Confidence 3 34556888 99999998887764444444
No 43
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1e-32 Score=239.82 Aligned_cols=232 Identities=20% Similarity=0.323 Sum_probs=188.6
Q ss_pred ccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccc-----------------eeeeeeeeeeeecCCce-EE
Q 021744 66 ANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNR-----------------AVIKTDILCRNWVQGNC-MY 124 (308)
Q Consensus 66 gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~-~~ 124 (308)
+|... +++|+|+|++ |+|+ |+++++|++.+++.+..... .+...+.++.|+|++.. ++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 46666 8999999999 7765 78999999987764322111 01113788999999976 88
Q ss_pred eeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEeCCCeeEEE--Ec-CC
Q 021744 125 GEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCM--IS-EG 201 (308)
Q Consensus 125 g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~~~~v~~~--~~-~~ 201 (308)
|+.|+.|++||+.++ +.+..+.+|...|.+++|+|++++|++++.|++|++||++++++...+.+...+.++ .+ ++
T Consensus 141 ~~~d~~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~ 219 (393)
T 1erj_A 141 GAEDRLIRIWDIENR-KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDG 219 (393)
T ss_dssp EETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTC
T ss_pred EcCCCeEEEEECCCC-cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCC
Confidence 999999999999998 788899999999999999999999999999999999999999999888877766665 35 78
Q ss_pred CEEEEEc-CCcEEEEEcCCCcee-ee-------eCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCc--------c
Q 021744 202 PWIFIGV-TNFVKAWNTQTNTDL-SL-------SGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTN--------C 262 (308)
Q Consensus 202 ~~l~~~~-d~~i~~wd~~~~~~~-~~-------~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~--------~ 262 (308)
+++++++ |+.|++||+++++.. .+ .+|...|.+++|+|+ +|++|+.|+.|++||+++... .
T Consensus 220 ~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~ 299 (393)
T 1erj_A 220 KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNS 299 (393)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--------------
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCC
Confidence 8998877 999999999998766 33 578999999999999 999999999999999986421 0
Q ss_pred cccceeccccCCCeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 263 FEPAASLKVHTDSNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 263 ~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
..+...+.+|...|.+ +|+|++.+|++++ +..|.++.
T Consensus 300 ~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd 338 (393)
T 1erj_A 300 GTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWD 338 (393)
T ss_dssp -CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEE
T ss_pred CcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 1234567789999999 9999999998665 66666655
No 44
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.8e-32 Score=229.34 Aligned_cols=235 Identities=13% Similarity=0.044 Sum_probs=183.7
Q ss_pred ccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCC-CcccccceeeeeeeeeeeecC--Cce-EEeeCCCeEEEEEc
Q 021744 64 ATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSK-NSNINNRAVIKTDILCRNWVQ--GNC-MYGEKCKFLHSWTV 136 (308)
Q Consensus 64 ~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~-~~g~~d~~i~iwd~ 136 (308)
+.+|... +++|+|+|++ |+|+.|++|+|||++... .......+|...+..+.|+++ +.. ++++.|++|++||+
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~ 84 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKE 84 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEB
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEc
Confidence 4577777 8999999999 999999999999996532 222345678888999999763 554 89999999999999
Q ss_pred CCCc-eeeeEeeCcccceEEEEEeCC--CCEEEEeeCCCcEEEEeCCCCeE--EEEEe-CCCeeEEE--EcC--------
Q 021744 137 GDGF-KLLTQLEGHQKVVSGITLPSG--SDKLYSGSKDETVRVWDCASGQC--AGVIN-LGGEVGCM--ISE-------- 200 (308)
Q Consensus 137 ~~~~-~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~dg~v~~wd~~~~~~--~~~~~-~~~~v~~~--~~~-------- 200 (308)
.++. ..+..+.+|...|.+++|+|+ +.+|++++.|++|++||++++.. ...+. |...+.++ .|+
T Consensus 85 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~ 164 (297)
T 2pm7_B 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 164 (297)
T ss_dssp SSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-------
T ss_pred CCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccC
Confidence 8762 356678889999999999997 78999999999999999987632 23333 66677665 233
Q ss_pred -----CCEEEEEc-CCcEEEEEcCCCc----ee-eeeCCCCCEEEEEEeCC-----EEEEEcCCCeEEEEEcCCCCcccc
Q 021744 201 -----GPWIFIGV-TNFVKAWNTQTNT----DL-SLSGPVGQVYAMAVGND-----LLFAGTQDGAILAWKFNVTTNCFE 264 (308)
Q Consensus 201 -----~~~l~~~~-d~~i~~wd~~~~~----~~-~~~~~~~~v~~~~~~~~-----~l~~g~~dg~i~iwd~~~~~~~~~ 264 (308)
+++|++++ |++|++||+++++ .. .+.+|...|.+++|+|+ +|++++.|++|++||++..... .
T Consensus 165 ~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~-~ 243 (297)
T 2pm7_B 165 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGP-W 243 (297)
T ss_dssp -----CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC-C
T ss_pred CCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCc-c
Confidence 46888776 9999999998765 33 67899999999999994 8999999999999999874210 0
Q ss_pred cceec--cccCCCeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 265 PAASL--KVHTDSNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 265 ~~~~~--~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
....+ ..|...+.. +|+|++++|++++ +..|.++.
T Consensus 244 ~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~ 282 (297)
T 2pm7_B 244 KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 282 (297)
T ss_dssp EEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEE
T ss_pred ceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 11222 467888998 9999999998665 44444444
No 45
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=8.2e-34 Score=249.94 Aligned_cols=273 Identities=13% Similarity=0.090 Sum_probs=198.7
Q ss_pred eeEEEeecCCCCCCCCCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEec-CCCe-eeccC
Q 021744 10 KRVFHRLGGGGGDGGGGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFAN-NTWG-RNNNF 85 (308)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~-~g~~-~s~~~ 85 (308)
.||..-..+| ..+.+||+|+.|++|+|||....+ .+......+|... +++|+| ++.+ ++|+.
T Consensus 120 ~~V~~l~~~P----~~~~~lasGs~dg~i~lWd~~~~~----------~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~ 185 (435)
T 4e54_B 120 RRATSLAWHP----THPSTVAVGSKGGDIMLWNFGIKD----------KPTFIKGIGAGGSITGLKFNPLNTNQFYASSM 185 (435)
T ss_dssp SCEEEEEECS----SCTTCEEEEETTSCEEEECSSCCS----------CCEEECCCSSSCCCCEEEECSSCTTEEEEECS
T ss_pred CCEEEEEEeC----CCCCEEEEEeCCCEEEEEECCCCC----------ceeEEEccCCCCCEEEEEEeCCCCCEEEEEeC
Confidence 3454444444 234689999999999999987651 1222345678877 899998 5777 99999
Q ss_pred CCcEEEEECCCCCCccc-ccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCC
Q 021744 86 NNHSNNYRAGNSKNSNI-NNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSD 163 (308)
Q Consensus 86 d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 163 (308)
|++|++||+++...... ....+...+.++.|++++.. ++|+.|+.|++||++.. .+..+.+|...|.+++|+|++.
T Consensus 186 D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~--~~~~~~~h~~~v~~v~~~p~~~ 263 (435)
T 4e54_B 186 EGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK--ELWNLRMHKKKVTHVALNPCCD 263 (435)
T ss_dssp SSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC--BCCCSBCCSSCEEEEEECTTCS
T ss_pred CCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc--eeEEEecccceEEeeeecCCCc
Confidence 99999999975532211 11112223677889999976 88999999999999754 5678899999999999999875
Q ss_pred -EEEEeeCCCcEEEEeCCCCeEEEEE----eCCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCcee-eeeCCCC----
Q 021744 164 -KLYSGSKDETVRVWDCASGQCAGVI----NLGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDL-SLSGPVG---- 230 (308)
Q Consensus 164 -~l~s~s~dg~v~~wd~~~~~~~~~~----~~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~~~---- 230 (308)
++++++.|++|++||+++.+....+ .|...+.++ .+++++|++++ |+.|++||+++++.. .+..|..
T Consensus 264 ~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~ 343 (435)
T 4e54_B 264 WFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQ 343 (435)
T ss_dssp SEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCS
T ss_pred eEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccc
Confidence 6889999999999999987654433 267778776 47899999876 999999999988755 4444332
Q ss_pred --CEEEEEEeCC--EEEEE------------cCCCeEEEEEcCCCCcccccceec-cccCCCeEE--EEecCCCeEEEee
Q 021744 231 --QVYAMAVGND--LLFAG------------TQDGAILAWKFNVTTNCFEPAASL-KVHTDSNRA--HFSRDVTSLLGSV 291 (308)
Q Consensus 231 --~v~~~~~~~~--~l~~g------------~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~v~~--~~s~d~~~l~~s~ 291 (308)
.+....|+|+ .++++ ..++.|++||..++ +.+..+ .+|...|.+ +|+|+|.+|+++.
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g----~~~~~l~~~~~~~v~s~~~fspdg~~lasg~ 419 (435)
T 4e54_B 344 HLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSG----KMMCQLYDPESSGISSLNEFNPMGDTLASAM 419 (435)
T ss_dssp SSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSC----CEEEEECCSSCCCCCCEEEECTTSSCEEEEC
T ss_pred cceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCC----cEEEEEeCCCCCcEEEEEEECCCCCEEEEEc
Confidence 2233455554 33333 34568999999987 555554 467777765 7999999999777
Q ss_pred ceEEEEeecCc
Q 021744 292 SFIMFIGQNNK 302 (308)
Q Consensus 292 s~~i~~~~~~~ 302 (308)
+..|.+|.-..
T Consensus 420 d~~i~iW~~~~ 430 (435)
T 4e54_B 420 GYHILIWSQQE 430 (435)
T ss_dssp SSEEEECCCC-
T ss_pred CCcEEEEECCc
Confidence 77777776444
No 46
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=4.6e-33 Score=242.61 Aligned_cols=263 Identities=14% Similarity=0.150 Sum_probs=206.0
Q ss_pred CceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEec-CCCe-eeccCCCcEEEEECCCCCC---
Q 021744 27 GLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFAN-NTWG-RNNNFNNHSNNYRAGNSKN--- 99 (308)
Q Consensus 27 ~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~-~g~~-~s~~~d~~i~vwd~~~~~~--- 99 (308)
.++++++.|+.|++|+.....+. ......+.+|... +++|+| ++.+ ++|+.|++|++||+.+++.
T Consensus 48 ~~~~~~~~~g~i~v~~~~~~~~~--------~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~ 119 (402)
T 2aq5_A 48 ALICEASGGGAFLVLPLGKTGRV--------DKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLP 119 (402)
T ss_dssp EEEBCCSSSCCEEEEETTCCEEC--------CTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSC
T ss_pred EEEEEEcCCCEEEEEECccCCCC--------CCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccc
Confidence 35556899999999998654110 1223345688877 899999 8888 9999999999999987642
Q ss_pred ---cccccceeeeeeeeeeeecCC-ce-EEeeCCCeEEEEEcCCCceeeeEe--eCcccceEEEEEeCCCCEEEEeeCCC
Q 021744 100 ---SNINNRAVIKTDILCRNWVQG-NC-MYGEKCKFLHSWTVGDGFKLLTQL--EGHQKVVSGITLPSGSDKLYSGSKDE 172 (308)
Q Consensus 100 ---~~~~~~~~~~~~~~~~~~~~~-~~-~~g~~d~~i~iwd~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~s~dg 172 (308)
.......|...+..+.|+|++ .. ++++.|+.|++||+.++ +.+..+ .+|...|.+++|+|++++|++++.|+
T Consensus 120 ~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 198 (402)
T 2aq5_A 120 LREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG-AAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDK 198 (402)
T ss_dssp BCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTT-EEEEEECTTTCCSCEEEEEECTTSSCEEEEETTS
T ss_pred cCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCC-CccEEEecCCCCCceEEEEECCCCCEEEEEecCC
Confidence 122345677779999999997 34 88999999999999998 788888 78999999999999999999999999
Q ss_pred cEEEEeCCCCeEEEEE-e-CCCe-eEE--EEcCCCEEEEE---c-CCcEEEEEcCCCce-e--eeeCCCCCEEEEEEeCC
Q 021744 173 TVRVWDCASGQCAGVI-N-LGGE-VGC--MISEGPWIFIG---V-TNFVKAWNTQTNTD-L--SLSGPVGQVYAMAVGND 240 (308)
Q Consensus 173 ~v~~wd~~~~~~~~~~-~-~~~~-v~~--~~~~~~~l~~~---~-d~~i~~wd~~~~~~-~--~~~~~~~~v~~~~~~~~ 240 (308)
.|++||+++++.+..+ . +... +.+ +.+++++|++| + |+.|++||+++.+. . ....+...+.+++|+|+
T Consensus 199 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~ 278 (402)
T 2aq5_A 199 RVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPD 278 (402)
T ss_dssp EEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETT
T ss_pred cEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCC
Confidence 9999999999999888 3 4433 333 35788888887 4 88999999998764 2 23356778999999999
Q ss_pred --EE-EEEcCCCeEEEEEcCCCCcccccceeccc--cCCCeEE-EEecCCCeEEEee-ceEEEEeecC
Q 021744 241 --LL-FAGTQDGAILAWKFNVTTNCFEPAASLKV--HTDSNRA-HFSRDVTSLLGSV-SFIMFIGQNN 301 (308)
Q Consensus 241 --~l-~~g~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~v~~-~~s~d~~~l~~s~-s~~i~~~~~~ 301 (308)
+| ++|+.||.|++||+.+++. .+..+.. |...+.+ +|+|++.+++++. .+.+|.+..+
T Consensus 279 ~~~l~~~g~~dg~i~i~d~~~~~~---~~~~l~~~~~~~~v~~~~~sp~~~~~~s~~~~~~~~~l~~~ 343 (402)
T 2aq5_A 279 TNIVYLCGKGDSSIRYFEITSEAP---FLHYLSMFSSKESQRGMGYMPKRGLEVNKCEIARFYKLHER 343 (402)
T ss_dssp TTEEEEEETTCSCEEEEEECSSTT---CEEEEEEECCSSCCSEEEECCGGGSCGGGTEEEEEEEEETT
T ss_pred CCEEEEEEcCCCeEEEEEecCCCc---ceEeecccccCCcccceEEecccccceecceeEEEEEcCCC
Confidence 55 5677899999999998732 1333333 5588888 9999999887544 5666666653
No 47
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2e-32 Score=242.75 Aligned_cols=254 Identities=15% Similarity=0.184 Sum_probs=208.1
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCccc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNI 102 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~ 102 (308)
+.++++++.|++|++||..++ . ....+.+|... +++|+|++ . ++|+.|++|++||+.+++...
T Consensus 132 ~~~l~sgs~dg~i~vwd~~~~-----------~-~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~- 197 (464)
T 3v7d_B 132 DNYVITGADDKMIRVYDSINK-----------K-FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTH- 197 (464)
T ss_dssp TTEEEEEETTSCEEEEETTTT-----------E-EEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEE-
T ss_pred CCEEEEEcCCCcEEEEECCCC-----------c-EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEE-
Confidence 568999999999999998876 1 12234577777 89999998 6 999999999999998876542
Q ss_pred ccceeeeeeeeeeeec--CCce-EEeeCCCeEEEEEcCCCce----------------------eeeEeeCcccceEEEE
Q 021744 103 NNRAVIKTDILCRNWV--QGNC-MYGEKCKFLHSWTVGDGFK----------------------LLTQLEGHQKVVSGIT 157 (308)
Q Consensus 103 ~~~~~~~~~~~~~~~~--~~~~-~~g~~d~~i~iwd~~~~~~----------------------~~~~~~~h~~~v~~~~ 157 (308)
....|...+.++.+.+ ++.. ++++.|+.|++||+.+... .+..+.+|...|.++
T Consensus 198 ~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 276 (464)
T 3v7d_B 198 VFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV- 276 (464)
T ss_dssp EECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE-
T ss_pred EECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE-
Confidence 3345777788888885 4444 8999999999999987631 255678899988887
Q ss_pred EeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe-CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCcee-eeeCCCCCE
Q 021744 158 LPSGSDKLYSGSKDETVRVWDCASGQCAGVIN-LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDL-SLSGPVGQV 232 (308)
Q Consensus 158 ~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~~~~v 232 (308)
+++++++++++.|+.|++||+++++++..+. +...+.++ .++++++++++ |+.|++||+++++.+ .+.+|...|
T Consensus 277 -~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v 355 (464)
T 3v7d_B 277 -SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALV 355 (464)
T ss_dssp -EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred -cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcE
Confidence 5668899999999999999999999999887 67777766 57889999877 999999999999888 788999999
Q ss_pred EEEEEeCCEEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEeeceEEEEeec
Q 021744 233 YAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSVSFIMFIGQN 300 (308)
Q Consensus 233 ~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~s~~i~~~~~ 300 (308)
.++++++.+|++++.||.|++||+.+. ...... .+...+.. +|++++.+++++.+..+.++.-
T Consensus 356 ~~~~~~~~~l~s~s~dg~v~vwd~~~~----~~~~~~-~~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~ 419 (464)
T 3v7d_B 356 GLLRLSDKFLVSAAADGSIRGWDANDY----SRKFSY-HHTNLSAITTFYVSDNILVSGSENQFNIYNL 419 (464)
T ss_dssp EEEEECSSEEEEEETTSEEEEEETTTC----CEEEEE-ECTTCCCEEEEEECSSEEEEEETTEEEEEET
T ss_pred EEEEEcCCEEEEEeCCCcEEEEECCCC----ceeeee-cCCCCccEEEEEeCCCEEEEecCCeEEEEEC
Confidence 999999889999999999999999986 333333 35666777 9999999999877666666653
No 48
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6e-33 Score=242.77 Aligned_cols=260 Identities=10% Similarity=0.065 Sum_probs=202.4
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcc
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSN 101 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~ 101 (308)
.+.+||+++.|+.|++||...+ . ....+.+|... +++|+|++.+ ++++.|++|++||+.+++...
T Consensus 108 ~~~~l~~~~~dg~i~iwd~~~~-----------~-~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~ 175 (420)
T 3vl1_A 108 QMRRFILGTTEGDIKVLDSNFN-----------L-QREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPR 175 (420)
T ss_dssp SSCEEEEEETTSCEEEECTTSC-----------E-EEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCE
T ss_pred CCCEEEEEECCCCEEEEeCCCc-----------c-eeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCce
Confidence 4678999999999999998765 1 11223467666 8999999999 999999999999998876553
Q ss_pred cccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeC---cccceE---------------------EE
Q 021744 102 INNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEG---HQKVVS---------------------GI 156 (308)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~---h~~~v~---------------------~~ 156 (308)
....|...+..+.|+|++.. ++++.|+.|++||++++ +.+..+.. |...|. ++
T Consensus 176 -~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~ 253 (420)
T 3vl1_A 176 -TLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTG-TTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNL 253 (420)
T ss_dssp -EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT-EEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTT
T ss_pred -EEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCC-ceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccce
Confidence 34567778999999999976 89999999999999998 77777764 334444 45
Q ss_pred EEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe--CCCeeEEE--EcCCC-EEEEEc-CCcEEEEEcCCCce-e-eeeC-
Q 021744 157 TLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN--LGGEVGCM--ISEGP-WIFIGV-TNFVKAWNTQTNTD-L-SLSG- 227 (308)
Q Consensus 157 ~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~--~~~~v~~~--~~~~~-~l~~~~-d~~i~~wd~~~~~~-~-~~~~- 227 (308)
+|+|++++|++++.||.|++||+++++.+..+. +...+.++ .++++ +|++++ |+.|++||+++++. . .+..
T Consensus 254 ~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~ 333 (420)
T 3vl1_A 254 EFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLIN 333 (420)
T ss_dssp CSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEES
T ss_pred EEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhcc
Confidence 557889999999999999999999998888776 55677766 46777 888776 89999999998754 3 5555
Q ss_pred CCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCCCcc-----cccceeccccCCCeEE-EEecCCC---eEEEee-ceEEE
Q 021744 228 PVGQVYAMAVGND-LLFAGTQDGAILAWKFNVTTNC-----FEPAASLKVHTDSNRA-HFSRDVT---SLLGSV-SFIMF 296 (308)
Q Consensus 228 ~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~-----~~~~~~~~~~~~~v~~-~~s~d~~---~l~~s~-s~~i~ 296 (308)
|...+.++.+.+. +|++++.|+.|++|++...... ......+..|...+.. +|+|+++ .+++.+ ...+.
T Consensus 334 ~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~ 413 (420)
T 3vl1_A 334 EGTPINNVYFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCA 413 (420)
T ss_dssp TTSCEEEEEEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEE
T ss_pred CCCCceEEEeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEE
Confidence 7778999987766 9999999999999999874210 0122234577888988 9999999 555444 43443
Q ss_pred Ee
Q 021744 297 IG 298 (308)
Q Consensus 297 ~~ 298 (308)
++
T Consensus 414 ~~ 415 (420)
T 3vl1_A 414 LY 415 (420)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 49
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-33 Score=242.57 Aligned_cols=259 Identities=11% Similarity=0.082 Sum_probs=210.5
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcc
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSN 101 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~ 101 (308)
.+.+|++++.|+.|++|+.... ....+.+|... +++|+|++.+ ++++.|+.|++||+.+++...
T Consensus 119 ~~~~l~~~~~dg~i~i~~~~~~-------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 119 DGNSIVTGVENGELRLWNKTGA-------------LLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQ 185 (425)
T ss_dssp TSSEEEEEETTSCEEEEETTSC-------------EEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCC-------------eeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEE
Confidence 3678999999999999993322 11223456555 8999999999 999999999999998776543
Q ss_pred cccceeeee---------------eeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEE
Q 021744 102 INNRAVIKT---------------DILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLY 166 (308)
Q Consensus 102 ~~~~~~~~~---------------~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 166 (308)
.. ..+... +..+.+.+++.+++++.++.|++||+.++ +.+..+.+|...|.+++|+|++++|+
T Consensus 186 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~ 263 (425)
T 1r5m_A 186 HF-ELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEK-TPTGKLIGHHGPISVLEFNDTNKLLL 263 (425)
T ss_dssp EE-CCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCS-SCSEEECCCSSCEEEEEEETTTTEEE
T ss_pred Ee-eccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCC-ceeeeeccCCCceEEEEECCCCCEEE
Confidence 21 222222 77888999988899999999999999998 78888899999999999999999999
Q ss_pred EeeCCCcEEEEeCCCCeEEEEEe-CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCcee-eeeCCCCCEEEEEEeCC-
Q 021744 167 SGSKDETVRVWDCASGQCAGVIN-LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND- 240 (308)
Q Consensus 167 s~s~dg~v~~wd~~~~~~~~~~~-~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~~~~v~~~~~~~~- 240 (308)
+++.|+.|++||+++++.+..+. +...+.++ .+++ ++++++ |+.|++||+++++.. .+..|...+.+++|+|+
T Consensus 264 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~ 342 (425)
T 1r5m_A 264 SASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDG 342 (425)
T ss_dssp EEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTS
T ss_pred EEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCC
Confidence 99999999999999998888887 67777766 4667 777655 999999999999887 77889999999999999
Q ss_pred -EEEEEcCCCeEEEEEcCCCCc----------------ccccceeccccCC--CeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 241 -LLFAGTQDGAILAWKFNVTTN----------------CFEPAASLKVHTD--SNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 241 -~l~~g~~dg~i~iwd~~~~~~----------------~~~~~~~~~~~~~--~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
+|++++.||.|++||+.+... ..+++..+..|.. .|.. +|+|++++|++++ +..|.++.
T Consensus 343 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 422 (425)
T 1r5m_A 343 QKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVA 422 (425)
T ss_dssp SEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEE
T ss_pred CEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEe
Confidence 999999999999999987520 0016778888866 8999 9999999988555 55555543
No 50
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=8.1e-34 Score=243.21 Aligned_cols=267 Identities=16% Similarity=0.184 Sum_probs=206.6
Q ss_pred CCCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecC----CCe-eeccCCCcEEEEECCC
Q 021744 24 GGGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANN----TWG-RNNNFNNHSNNYRAGN 96 (308)
Q Consensus 24 ~~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~----g~~-~s~~~d~~i~vwd~~~ 96 (308)
++...+++++.++.|++|+..++.... .+. . .....|... +++|+|+ +.+ ++|+.|++|++||+.+
T Consensus 32 ~~~~~~~~~~~~~~v~vw~~~~~~~~~--~~~---~--~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 104 (366)
T 3k26_A 32 EGDPLVFATVGSNRVTLYECHSQGEIR--LLQ---S--YVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPIT 104 (366)
T ss_dssp TTSCEEEEEEETTEEEEEEECGGGCEE--EEE---E--EECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTT
T ss_pred CCCceEEEECCCCEEEEEEcCCCcEEE--eee---e--ccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchh
Confidence 345667777777799999988651100 000 0 000113333 8999999 557 9999999999999988
Q ss_pred CCCcccccceeeeeeeeeeeec-CCce-EEeeCCCeEEEEEcCCCceeeeEe---eCcccceEEEEEeCCCCEEEEeeCC
Q 021744 97 SKNSNINNRAVIKTDILCRNWV-QGNC-MYGEKCKFLHSWTVGDGFKLLTQL---EGHQKVVSGITLPSGSDKLYSGSKD 171 (308)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~g~~d~~i~iwd~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~s~s~d 171 (308)
++... ....|...+..+.|+| ++.. ++++.|+.|++||+.++ +.+..+ .+|...|.+++|+|++++|++++.|
T Consensus 105 ~~~~~-~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 182 (366)
T 3k26_A 105 MQCIK-HYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD-TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD 182 (366)
T ss_dssp CCEEE-EEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTT-EEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT
T ss_pred ceEee-eecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecC-eEEEEecccccccCceeEEEECCCCCEEEEecCC
Confidence 76543 3445777899999999 7765 88999999999999998 777777 6899999999999999999999999
Q ss_pred CcEEEEeCCCCeEEEEEe-----------------------------CCCeeEEEEcCCCEEEEEc-CCcEEEEEcCCCc
Q 021744 172 ETVRVWDCASGQCAGVIN-----------------------------LGGEVGCMISEGPWIFIGV-TNFVKAWNTQTNT 221 (308)
Q Consensus 172 g~v~~wd~~~~~~~~~~~-----------------------------~~~~v~~~~~~~~~l~~~~-d~~i~~wd~~~~~ 221 (308)
+.|++||+++++.+..+. +...+.++...++++++++ |+.|++||+++.+
T Consensus 183 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~ 262 (366)
T 3k26_A 183 HSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKME 262 (366)
T ss_dssp SCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTT
T ss_pred CCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCcc
Confidence 999999999876543322 5666777754478888877 9999999998764
Q ss_pred e--------------e-eeeCCCCCEEEEEEeCC----EEEEEcCCCeEEEEEcCCCCcccccceecccc--CCCeEE-E
Q 021744 222 D--------------L-SLSGPVGQVYAMAVGND----LLFAGTQDGAILAWKFNVTTNCFEPAASLKVH--TDSNRA-H 279 (308)
Q Consensus 222 ~--------------~-~~~~~~~~v~~~~~~~~----~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~v~~-~ 279 (308)
. . .+..|...|++++|+|+ +|++|+.||.|++||+.++.........+..| ...|.+ +
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~ 342 (366)
T 3k26_A 263 DDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTS 342 (366)
T ss_dssp CCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEE
T ss_pred ccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEE
Confidence 3 3 67788889999999875 99999999999999999874322234467776 789999 9
Q ss_pred EecCCCeEEEee-ceEEEEee
Q 021744 280 FSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 280 ~s~d~~~l~~s~-s~~i~~~~ 299 (308)
|+|++++|++++ +..|+++.
T Consensus 343 ~s~~~~~l~s~~~dg~i~iwd 363 (366)
T 3k26_A 343 FSRDSSILIAVCDDASIWRWD 363 (366)
T ss_dssp ECTTSSEEEEEETTSEEEEEE
T ss_pred eCCCCCeEEEEeCCCEEEEEE
Confidence 999999998666 66666665
No 51
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5.6e-32 Score=227.70 Aligned_cols=231 Identities=20% Similarity=0.286 Sum_probs=192.4
Q ss_pred Cccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCC
Q 021744 63 AATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGD 138 (308)
Q Consensus 63 ~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~ 138 (308)
.+.+|... +++|+|++++ ++++.|++|++|++.+++... ....|...+..+.|+|++.. ++++.|+.|++||+.+
T Consensus 18 ~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~ 96 (312)
T 4ery_A 18 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 96 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccch-hhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCC
Confidence 34688877 8999999999 999999999999998775432 34567777999999999976 8899999999999999
Q ss_pred CceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe-CCCeeEEE--EcCCCEEEEEc-CCcEEE
Q 021744 139 GFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN-LGGEVGCM--ISEGPWIFIGV-TNFVKA 214 (308)
Q Consensus 139 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-~~~~v~~~--~~~~~~l~~~~-d~~i~~ 214 (308)
+ +.+..+.+|...|.+++|+|++++|++++.|++|++||+++++.+..+. +..++.++ .++++++++++ |+.|++
T Consensus 97 ~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 175 (312)
T 4ery_A 97 G-KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 175 (312)
T ss_dssp C-CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred C-cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Confidence 8 7888999999999999999999999999999999999999999988887 66777766 47788888776 999999
Q ss_pred EEcCCCcee-ee-eCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCe---EEEEe-cCCCe
Q 021744 215 WNTQTNTDL-SL-SGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSN---RAHFS-RDVTS 286 (308)
Q Consensus 215 wd~~~~~~~-~~-~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v---~~~~s-~d~~~ 286 (308)
||+++++.. .+ ..+...+..++|+|+ +|++++.|+.|++||++++ +.+..+.+|.... ...++ +++.+
T Consensus 176 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (312)
T 4ery_A 176 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG----KCLKTYTGHKNEKYCIFANFSVTGGKW 251 (312)
T ss_dssp EETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTT----EEEEEECSSCCSSSCCCEEEECSSSCE
T ss_pred EECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC----cEEEEEEecCCceEEEEEEEEeCCCcE
Confidence 999998876 33 456678999999999 9999999999999999987 6677777776543 33444 56777
Q ss_pred EEEee-ceEEEEee
Q 021744 287 LLGSV-SFIMFIGQ 299 (308)
Q Consensus 287 l~~s~-s~~i~~~~ 299 (308)
|++++ +..|.++.
T Consensus 252 l~sg~~dg~i~vwd 265 (312)
T 4ery_A 252 IVSGSEDNLVYIWN 265 (312)
T ss_dssp EEECCTTSCEEEEE
T ss_pred EEEECCCCEEEEEE
Confidence 77655 44444443
No 52
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-33 Score=246.35 Aligned_cols=266 Identities=9% Similarity=0.110 Sum_probs=206.2
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecC-CCe-eeccCCCcEEEEECCCCC--
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANN-TWG-RNNNFNNHSNNYRAGNSK-- 98 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~-g~~-~s~~~d~~i~vwd~~~~~-- 98 (308)
.+.+|++++.|+.|++|+....... ......+.+|... +++|+|+ +.+ ++++.|++|++||+.+++
T Consensus 78 ~~~~l~~~~~dg~v~vw~~~~~~~~--------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 149 (416)
T 2pm9_A 78 NNKIIAGALDNGSLELYSTNEANNA--------INSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTES 149 (416)
T ss_dssp SSSCEEEEESSSCEEEECCSSTTSC--------CCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSC
T ss_pred CCCeEEEEccCCeEEEeeccccccc--------ccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccc
Confidence 3578999999999999998863100 1122234466666 8999998 777 999999999999998775
Q ss_pred ----Cccc--ccceeeeeeeeeeeecC-Cce-EEeeCCCeEEEEEcCCCceeeeEeeCc------ccceEEEEEeCCC-C
Q 021744 99 ----NSNI--NNRAVIKTDILCRNWVQ-GNC-MYGEKCKFLHSWTVGDGFKLLTQLEGH------QKVVSGITLPSGS-D 163 (308)
Q Consensus 99 ----~~~~--~~~~~~~~~~~~~~~~~-~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h------~~~v~~~~~~~~~-~ 163 (308)
.... ....|...+..+.|+++ +.. ++++.|+.|++||++++ +.+..+..| ...|.+++|+|++ .
T Consensus 150 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 228 (416)
T 2pm9_A 150 PSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAK-KEVIHLSYTSPNSGIKQQLSVVEWHPKNST 228 (416)
T ss_dssp TTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTT-EEEEEECCCCCSSCCCCCEEEEEECSSCTT
T ss_pred cccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCC-CcceEEeccccccccCCceEEEEECCCCCC
Confidence 2211 23456677999999998 444 88999999999999998 777787766 7899999999997 6
Q ss_pred EEEEeeCCC---cEEEEeCCCC-eEEEEEe--CCCeeEEE--Ec-CCCEEEEEc-CCcEEEEEcCCCcee-eeeCCCCCE
Q 021744 164 KLYSGSKDE---TVRVWDCASG-QCAGVIN--LGGEVGCM--IS-EGPWIFIGV-TNFVKAWNTQTNTDL-SLSGPVGQV 232 (308)
Q Consensus 164 ~l~s~s~dg---~v~~wd~~~~-~~~~~~~--~~~~v~~~--~~-~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~~~~v 232 (308)
++++++.|+ .|++||++++ +++..+. +...+.++ .+ ++++|++++ |+.|++||+++++.+ .+..|...|
T Consensus 229 ~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v 308 (416)
T 2pm9_A 229 RVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWC 308 (416)
T ss_dssp EEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCC
T ss_pred EEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCce
Confidence 899999999 9999999986 5666665 66777776 35 788888776 999999999999887 788999999
Q ss_pred EEEEEeCC---EEEEEcCCCeEEEEEcCCCCcccccc-------------------------------eeccccCCCeEE
Q 021744 233 YAMAVGND---LLFAGTQDGAILAWKFNVTTNCFEPA-------------------------------ASLKVHTDSNRA 278 (308)
Q Consensus 233 ~~~~~~~~---~l~~g~~dg~i~iwd~~~~~~~~~~~-------------------------------~~~~~~~~~v~~ 278 (308)
.+++|+|+ +|++++.|+.|++||+.......... .....|..++..
T Consensus 309 ~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (416)
T 2pm9_A 309 FKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPA 388 (416)
T ss_dssp CCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCC
T ss_pred EEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccc
Confidence 99999996 89999999999999998763210000 001115667767
Q ss_pred -EEecCCCeEEEee-ceEEEEee
Q 021744 279 -HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 279 -~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
+|+|||++|+++. +..|.+|.
T Consensus 389 ~~~s~dg~~la~~~~d~~v~~w~ 411 (416)
T 2pm9_A 389 AHWAFGGKLVQITPDGKGVSITN 411 (416)
T ss_dssp CEEETTTEEECBCTTSSCBCCBC
T ss_pred eEEeeCCeEEEEeCCCCeEEEEE
Confidence 9999999998655 44444443
No 53
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.1e-32 Score=228.91 Aligned_cols=223 Identities=11% Similarity=0.093 Sum_probs=177.0
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecC--CCe-eeccCCCcEEEEECCCCCCc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANN--TWG-RNNNFNNHSNNYRAGNSKNS 100 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~--g~~-~s~~~d~~i~vwd~~~~~~~ 100 (308)
+.+|||++.|++|++|+..... ......+.+|... +++|+|+ +.+ ++|+.|++|++||+++++..
T Consensus 21 g~~las~s~D~~v~iw~~~~~~----------~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~ 90 (297)
T 2pm7_B 21 GKRMATCSSDKTIKIFEVEGET----------HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWS 90 (297)
T ss_dssp SSEEEEEETTSCEEEEEBCSSC----------BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBC
T ss_pred CCEEEEEeCCCEEEEEecCCCC----------cEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceE
Confidence 6789999999999999986430 1223345688887 8999863 778 99999999999999876422
Q ss_pred -ccccceeeeeeeeeeeecC--Cce-EEeeCCCeEEEEEcCCCc-eeeeEeeCcccceEEEEEeCC-------------C
Q 021744 101 -NINNRAVIKTDILCRNWVQ--GNC-MYGEKCKFLHSWTVGDGF-KLLTQLEGHQKVVSGITLPSG-------------S 162 (308)
Q Consensus 101 -~~~~~~~~~~~~~~~~~~~--~~~-~~g~~d~~i~iwd~~~~~-~~~~~~~~h~~~v~~~~~~~~-------------~ 162 (308)
......|...+.++.|+|+ +.. ++++.|+.|++||+++.. .....+.+|...|.+++|+|+ +
T Consensus 91 ~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~ 170 (297)
T 2pm7_B 91 QIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKES 170 (297)
T ss_dssp CCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------C
T ss_pred EEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCc
Confidence 1223456777999999997 544 899999999999998762 224567899999999999997 4
Q ss_pred CEEEEeeCCCcEEEEeCCCCe----EEEEEe-CCCeeEEE--EcC---CCEEEEEc-CCcEEEEEcCCCc----eeee--
Q 021744 163 DKLYSGSKDETVRVWDCASGQ----CAGVIN-LGGEVGCM--ISE---GPWIFIGV-TNFVKAWNTQTNT----DLSL-- 225 (308)
Q Consensus 163 ~~l~s~s~dg~v~~wd~~~~~----~~~~~~-~~~~v~~~--~~~---~~~l~~~~-d~~i~~wd~~~~~----~~~~-- 225 (308)
++|++|+.|++|++||+++++ .+..+. |...+.++ .|+ +.+|++++ |++|++||+++.+ ...+
T Consensus 171 ~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~ 250 (297)
T 2pm7_B 171 RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKE 250 (297)
T ss_dssp CEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSS
T ss_pred ceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeec
Confidence 689999999999999998765 445565 77788877 355 36788776 9999999998753 1122
Q ss_pred eCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCC
Q 021744 226 SGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNV 258 (308)
Q Consensus 226 ~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~ 258 (308)
..|...|.+++|+|+ +|++++.|+.|++|+...
T Consensus 251 ~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 251 EKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp SCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred ccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 467889999999999 899999999999999874
No 54
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=7.9e-32 Score=236.21 Aligned_cols=256 Identities=17% Similarity=0.206 Sum_probs=199.4
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCccc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNI 102 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~ 102 (308)
+++||.| .|++|+|||+.+++. .......+|... +++|+|+|.+ |+|+.|++|+|||+++++.+.
T Consensus 116 ~n~lAvg-ld~tV~lWd~~tg~~----------~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~- 183 (420)
T 4gga_A 116 GNVLAVA-LDNSVYLWSASSGDI----------LQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR- 183 (420)
T ss_dssp TSEEEEE-ETTEEEEEETTTCCE----------EEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE-
T ss_pred CCEEEEE-eCCEEEEEECCCCCE----------EEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE-
Confidence 4566665 599999999998711 001122355555 8999999999 999999999999998886553
Q ss_pred ccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCC
Q 021744 103 NNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCAS 181 (308)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~ 181 (308)
....|...+.++.+ ++.. ++|+.|+.+++||.......+..+.+|...+..+.++|++.++++++.|+.+++|+..+
T Consensus 184 ~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~ 261 (420)
T 4gga_A 184 NMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 261 (420)
T ss_dssp EECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred EEeCCCCceEEEee--CCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecc
Confidence 23445555655544 4444 88999999999999887677888999999999999999999999999999999999987
Q ss_pred CeE----EEEEe-CCCeeEEE--EcC-CCEEEE--Ec-CCcEEEEEcCCCceeeeeCCCCCEEEEEEeCC--EEEE--Ec
Q 021744 182 GQC----AGVIN-LGGEVGCM--ISE-GPWIFI--GV-TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LLFA--GT 246 (308)
Q Consensus 182 ~~~----~~~~~-~~~~v~~~--~~~-~~~l~~--~~-d~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~--~l~~--g~ 246 (308)
++. +.... +...+.++ ++. ..++++ |+ |++|++||+++++......+...+.++.|+|+ .+++ |+
T Consensus 262 ~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~ 341 (420)
T 4gga_A 262 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGF 341 (420)
T ss_dssp CSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECT
T ss_pred ccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEec
Confidence 653 23333 66677665 344 456554 33 89999999999998854445568999999998 5554 44
Q ss_pred CCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 247 QDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 247 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
.|+.|++||+.++ +++.++.+|...|.+ +|+|||++|++++ +..|.+|.
T Consensus 342 ~d~~I~iwd~~~~----~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWd 392 (420)
T 4gga_A 342 AQNQLVIWKYPTM----AKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWR 392 (420)
T ss_dssp TTCCEEEEETTTC----CEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEEC
T ss_pred CCCEEEEEECCCC----cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEE
Confidence 7999999999987 788999999999999 9999999999665 66666654
No 55
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.4e-33 Score=235.80 Aligned_cols=237 Identities=13% Similarity=0.072 Sum_probs=178.9
Q ss_pred Cccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCC-cccccceeeeeeeeeeeecC--C-ceEEeeCCCeEEEEE
Q 021744 63 AATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKN-SNINNRAVIKTDILCRNWVQ--G-NCMYGEKCKFLHSWT 135 (308)
Q Consensus 63 ~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~--~-~~~~g~~d~~i~iwd 135 (308)
.+.+|... +++|+|+|++ |+|+.|++|+|||+.+++. ......+|...+..+.|+++ + .+++++.|+.|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 34578877 8999999999 9999999999999976642 22345678888999999753 4 459999999999999
Q ss_pred cCCCc-eeeeEeeCcccceEEEEEeCC--CCEEEEeeCCCcEEEEeCCCCeEEE---EEe-CCCeeEEE--EcC------
Q 021744 136 VGDGF-KLLTQLEGHQKVVSGITLPSG--SDKLYSGSKDETVRVWDCASGQCAG---VIN-LGGEVGCM--ISE------ 200 (308)
Q Consensus 136 ~~~~~-~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~dg~v~~wd~~~~~~~~---~~~-~~~~v~~~--~~~------ 200 (308)
++++. +....+.+|...|.+++|+|+ +.+|++++.|++|++||++.+.... .+. |...+.++ .++
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 98762 356678899999999999997 7899999999999999998763221 111 44444443 233
Q ss_pred -----------CCEEEEEc-CCcEEEEEcCCC---cee-eeeCCCCCEEEEEEeCC------EEEEEcCCCeEEEEEcCC
Q 021744 201 -----------GPWIFIGV-TNFVKAWNTQTN---TDL-SLSGPVGQVYAMAVGND------LLFAGTQDGAILAWKFNV 258 (308)
Q Consensus 201 -----------~~~l~~~~-d~~i~~wd~~~~---~~~-~~~~~~~~v~~~~~~~~------~l~~g~~dg~i~iwd~~~ 258 (308)
+++|++++ |+.|++||++.. +.. .+.+|...|.+++|+|+ +|++++.|++|++|++.+
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred cccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 36788776 999999999865 233 67899999999999984 799999999999999986
Q ss_pred CCcccccceeccccCCCeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 259 TTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 259 ~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
..........+..|...|.+ +|+|++++|++++ +..+.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~ 290 (316)
T 3bg1_A 248 ASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWK 290 (316)
T ss_dssp TTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEE
T ss_pred ccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEE
Confidence 32101123445678899999 9999999998665 54454444
No 56
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.1e-32 Score=240.91 Aligned_cols=256 Identities=16% Similarity=0.225 Sum_probs=206.3
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCe-eeccCCCcEEEEECCCCCCccccc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINN 104 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~ 104 (308)
+.++++|+.|++|++||..++ .....+.+|.....++..++.. ++|+.|++|++||+.+++... ..
T Consensus 143 ~~~l~~g~~dg~i~iwd~~~~------------~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~-~~ 209 (435)
T 1p22_A 143 DQKIVSGLRDNTIKIWDKNTL------------ECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLN-TL 209 (435)
T ss_dssp SSEEEEEESSSCEEEEESSSC------------CEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEE-EE
T ss_pred CCEEEEEeCCCeEEEEeCCCC------------eEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEE-EE
Confidence 678999999999999998876 1122345677663344448888 999999999999998886543 33
Q ss_pred ceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCce--eeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCC
Q 021744 105 RAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFK--LLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG 182 (308)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~ 182 (308)
..|...+..+.+.+ +.+++++.|+.|++||+.++.. ....+.+|...|.+++| +++++++++.|++|++||++++
T Consensus 210 ~~h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~ 286 (435)
T 1p22_A 210 IHHCEAVLHLRFNN-GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTC 286 (435)
T ss_dssp CCCCSCEEEEECCT-TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTC
T ss_pred cCCCCcEEEEEEcC-CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcC
Confidence 45666788888763 4669999999999999988732 22678899999999999 5789999999999999999999
Q ss_pred eEEEEEe-CCCeeEEEEcCCCEEEEEc-CCcEEEEEcCCCcee-eeeCCCCCEEEEEEeCCEEEEEcCCCeEEEEEcCCC
Q 021744 183 QCAGVIN-LGGEVGCMISEGPWIFIGV-TNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 183 ~~~~~~~-~~~~v~~~~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~ 259 (308)
+.+..+. +...+.++..+++++++|+ |+.|++||+++++.. .+.+|...|.++++.+.+|++|+.||.|++||+.++
T Consensus 287 ~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~ 366 (435)
T 1p22_A 287 EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAA 366 (435)
T ss_dssp CEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHH
T ss_pred cEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEecCCEEEEEeCCCcEEEEECCCC
Confidence 9999988 7788888877888888776 999999999999887 788999999999996669999999999999999764
Q ss_pred Ccc-----cccceeccccCCCeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 260 TNC-----FEPAASLKVHTDSNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 260 ~~~-----~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
... ..++..+..|...|.+ +| ++.+|++++ +..|.++.
T Consensus 367 ~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd 411 (435)
T 1p22_A 367 LDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 411 (435)
T ss_dssp TSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC
T ss_pred CCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEE
Confidence 210 0156778899999998 88 677777655 55555554
No 57
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=8.6e-32 Score=228.03 Aligned_cols=228 Identities=14% Similarity=0.235 Sum_probs=191.5
Q ss_pred ccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccc----eeeeeeeeeeeecCCce-EEeeCCCeEEEEEcC
Q 021744 66 ANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNR----AVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVG 137 (308)
Q Consensus 66 gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~ 137 (308)
+|... +++|+|++.+ ++++ |++|++||+.+++....... .+...+..+.|+|++.. ++++.|+.|++||+.
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 127 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLA 127 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECC
T ss_pred cCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECC
Confidence 56555 8999999999 8888 99999999987653322221 45667999999999976 889999999999999
Q ss_pred CCc-eeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe-CCCeeEEE--EcCCCEEEEEc-CCcE
Q 021744 138 DGF-KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN-LGGEVGCM--ISEGPWIFIGV-TNFV 212 (308)
Q Consensus 138 ~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-~~~~v~~~--~~~~~~l~~~~-d~~i 212 (308)
++. .....+..|...|.+++|+|+++++++++.|+.|++||+++++.+..+. +...+.++ .++++++++++ |+.|
T Consensus 128 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 207 (337)
T 1gxr_A 128 APTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTV 207 (337)
T ss_dssp CC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcE
Confidence 872 2567788899999999999999999999999999999999999998887 67777766 46888888776 9999
Q ss_pred EEEEcCCCceeeeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEE
Q 021744 213 KAWNTQTNTDLSLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLG 289 (308)
Q Consensus 213 ~~wd~~~~~~~~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~ 289 (308)
++||+++++......+...+.+++|+|+ ++++++.|+.|++||++++ + ...+..|...+.. +|+|++++|++
T Consensus 208 ~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~----~-~~~~~~~~~~v~~~~~~~~~~~l~~ 282 (337)
T 1gxr_A 208 RSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKP----D-KYQLHLHESCVLSLKFAYCGKWFVS 282 (337)
T ss_dssp EEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSS----C-EEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC----C-eEEEcCCccceeEEEECCCCCEEEE
Confidence 9999999988855568889999999999 9999999999999999985 2 3467789999999 99999999886
Q ss_pred ee-ceEEEEee
Q 021744 290 SV-SFIMFIGQ 299 (308)
Q Consensus 290 s~-s~~i~~~~ 299 (308)
++ +..+.++.
T Consensus 283 ~~~dg~i~~~~ 293 (337)
T 1gxr_A 283 TGKDNLLNAWR 293 (337)
T ss_dssp EETTSEEEEEE
T ss_pred ecCCCcEEEEE
Confidence 65 55555554
No 58
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=5.5e-33 Score=244.81 Aligned_cols=269 Identities=9% Similarity=0.086 Sum_probs=198.3
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccc------------cc--eeEEecCC--Ce-eeccCCC
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANG------------AA--AKRFANNT--WG-RNNNFNN 87 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~------------~~--~i~~s~~g--~~-~s~~~d~ 87 (308)
.+.+||+|+.|+.|++|+............ .+......+.+|. .. +++|+|++ .. ++++.|+
T Consensus 39 ~g~~la~g~~dg~v~iw~~~~~~~~~~~~~-~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~ 117 (447)
T 3dw8_B 39 SGELLATGDKGGRVVIFQQEQENKIQSHSR-GEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDK 117 (447)
T ss_dssp SSSEEEEEETTSEEEEEEECC-----CCCC-CCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSS
T ss_pred CCCEEEEEcCCCeEEEEEecCCCCCCcccc-cceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCC
Confidence 367899999999999999887621100000 0000122344665 44 89999998 67 9999999
Q ss_pred cEEEEECCCCCCcc---------------------------------------cccceeeeeeeeeeeecCCce-EEeeC
Q 021744 88 HSNNYRAGNSKNSN---------------------------------------INNRAVIKTDILCRNWVQGNC-MYGEK 127 (308)
Q Consensus 88 ~i~vwd~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~-~~g~~ 127 (308)
+|++||+.+++... .....|...+..+.|+|++.. ++| .
T Consensus 118 ~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~ 196 (447)
T 3dw8_B 118 TIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-D 196 (447)
T ss_dssp CEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-C
T ss_pred eEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-C
Confidence 99999996532210 112456677999999999977 555 8
Q ss_pred CCeEEEEEcCCCceeee-------EeeCcccceEEEEEeCCC-CEEEEeeCCCcEEEEeCCCCeE----EEEEeC-CC--
Q 021744 128 CKFLHSWTVGDGFKLLT-------QLEGHQKVVSGITLPSGS-DKLYSGSKDETVRVWDCASGQC----AGVINL-GG-- 192 (308)
Q Consensus 128 d~~i~iwd~~~~~~~~~-------~~~~h~~~v~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~~~----~~~~~~-~~-- 192 (308)
|+.|++||+.+..+.+. .+.+|...|.+++|+|++ ++|++++.|++|++||+++++. +..+.. ..
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 276 (447)
T 3dw8_B 197 DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPS 276 (447)
T ss_dssp SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC----
T ss_pred CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCcc
Confidence 99999999985424444 356899999999999998 9999999999999999999886 667763 32
Q ss_pred ----------eeEEE--EcCCCEEEEEcCCcEEEEEcCC-Ccee-eeeCCCCC---------------EEEEEEeCC--E
Q 021744 193 ----------EVGCM--ISEGPWIFIGVTNFVKAWNTQT-NTDL-SLSGPVGQ---------------VYAMAVGND--L 241 (308)
Q Consensus 193 ----------~v~~~--~~~~~~l~~~~d~~i~~wd~~~-~~~~-~~~~~~~~---------------v~~~~~~~~--~ 241 (308)
.+.++ .+++++|++++++.|++||+++ ++.+ .+..|... +..++|+|+ +
T Consensus 277 ~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~ 356 (447)
T 3dw8_B 277 NRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSV 356 (447)
T ss_dssp -CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSE
T ss_pred ccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCE
Confidence 66665 4789999987779999999997 6655 67777531 334999999 8
Q ss_pred EEEEcCCCeEEEEEcCCCCcccccceecc---------------------------------ccCCCeEE-EEecCCCeE
Q 021744 242 LFAGTQDGAILAWKFNVTTNCFEPAASLK---------------------------------VHTDSNRA-HFSRDVTSL 287 (308)
Q Consensus 242 l~~g~~dg~i~iwd~~~~~~~~~~~~~~~---------------------------------~~~~~v~~-~~s~d~~~l 287 (308)
|++|+.||.|++||+.+++. + .+. .+...+.. +|+|++.+|
T Consensus 357 l~s~s~dg~v~iwd~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~l 431 (447)
T 3dw8_B 357 VMTGSYNNFFRMFDRNTKRD----I-TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENII 431 (447)
T ss_dssp EEEECSTTEEEEEETTTCCE----E-EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEE
T ss_pred EEEeccCCEEEEEEcCCCcc----e-eeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEE
Confidence 99999999999999988632 1 111 23446777 999999999
Q ss_pred EEeeceEEEEeec
Q 021744 288 LGSVSFIMFIGQN 300 (308)
Q Consensus 288 ~~s~s~~i~~~~~ 300 (308)
+++++..+|++..
T Consensus 432 a~~~~~~~~~~~~ 444 (447)
T 3dw8_B 432 AVATTNNLYIFQD 444 (447)
T ss_dssp EEECSSCEEEEEC
T ss_pred EEEecceeeeecc
Confidence 9877666777654
No 59
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=9.8e-32 Score=237.24 Aligned_cols=242 Identities=14% Similarity=0.212 Sum_probs=189.6
Q ss_pred CceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcccc
Q 021744 27 GLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNIN 103 (308)
Q Consensus 27 ~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~ 103 (308)
.++++++.|++|++||..++ .....+.+|... ++.+ ++.. ++|+.|++|++||+.+++... .
T Consensus 170 ~~l~s~~~dg~i~vwd~~~~------------~~~~~~~~h~~~v~~~~~--~~~~l~s~s~dg~i~~wd~~~~~~~~-~ 234 (445)
T 2ovr_B 170 NIIISGSTDRTLKVWNAETG------------ECIHTLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLH-V 234 (445)
T ss_dssp TEEEEEETTSCEEEEETTTT------------EEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEESSSCCEEE-E
T ss_pred CEEEEEeCCCeEEEEECCcC------------cEEEEECCCCCcEEEEEe--cCCEEEEEeCCCEEEEEECCCCcEEE-E
Confidence 35555555555555555443 011123356555 4444 4566 888889999999887765442 2
Q ss_pred cceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCe
Q 021744 104 NRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQ 183 (308)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~ 183 (308)
...|...+.++.+ .....++++.|+.|++||+.++ +.+..+.+|...|.+++| ++.++++++.|+.|++||+++++
T Consensus 235 ~~~~~~~v~~~~~-~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~ 310 (445)
T 2ovr_B 235 LMGHVAAVRCVQY-DGRRVVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN 310 (445)
T ss_dssp EECCSSCEEEEEE-CSSCEEEEETTSCEEEEEGGGT-EEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCC
T ss_pred EcCCcccEEEEEE-CCCEEEEEcCCCEEEEEECCCC-cEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCC
Confidence 3445556777776 3334589999999999999998 788999999999999999 67899999999999999999999
Q ss_pred EEEEEe-CCCeeEEEEcCCCEEEEEc-CCcEEEEEcCCCcee-eeeC---CCCCEEEEEEeCCEEEEEcCCCeEEEEEcC
Q 021744 184 CAGVIN-LGGEVGCMISEGPWIFIGV-TNFVKAWNTQTNTDL-SLSG---PVGQVYAMAVGNDLLFAGTQDGAILAWKFN 257 (308)
Q Consensus 184 ~~~~~~-~~~~v~~~~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~---~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~ 257 (308)
.+..+. +...+.++.++++++++++ |+.|++||+++++.. .+.. |...|.+++|+++++++|+.||.|++||+.
T Consensus 311 ~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~ 390 (445)
T 2ovr_B 311 CIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLK 390 (445)
T ss_dssp EEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETT
T ss_pred EEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECC
Confidence 998887 6777888877888888776 999999999998877 5554 888999999988899999999999999999
Q ss_pred CCCcccccceec-----cccCCCeEE-EEecCCCeEEEee
Q 021744 258 VTTNCFEPAASL-----KVHTDSNRA-HFSRDVTSLLGSV 291 (308)
Q Consensus 258 ~~~~~~~~~~~~-----~~~~~~v~~-~~s~d~~~l~~s~ 291 (308)
++ +.+..+ ..|...+.+ +|+|++.++++++
T Consensus 391 ~~----~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~ 426 (445)
T 2ovr_B 391 TG----EFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGS 426 (445)
T ss_dssp TC----CEEEEEEECTTGGGTCEEEEEEECSSEEEEEEEC
T ss_pred CC----ceeeeeeccccCCCCceEEEEEecCCEEEEEEcc
Confidence 87 555555 478889999 9999999888665
No 60
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.8e-32 Score=232.97 Aligned_cols=263 Identities=10% Similarity=0.005 Sum_probs=203.9
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCccc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNI 102 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~ 102 (308)
+.++++++.|+.|++|+...+. ......+.+|... +++|+|++.+ ++++.|++|++||+++++....
T Consensus 20 ~~~l~~~~~d~~v~i~~~~~~~----------~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 89 (372)
T 1k8k_C 20 RTQIAICPNNHEVHIYEKSGNK----------WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPT 89 (372)
T ss_dssp SSEEEEECSSSEEEEEEEETTE----------EEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEE
T ss_pred CCEEEEEeCCCEEEEEeCCCCc----------EEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeee
Confidence 5789999999999999987651 0012233466666 8999999999 9999999999999977653222
Q ss_pred -ccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCce---eeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEE
Q 021744 103 -NNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFK---LLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVW 177 (308)
Q Consensus 103 -~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~w 177 (308)
....|...+..+.|++++.. ++++.|+.|++||+..... ......+|...|.+++|+|++++|++++.|+.|++|
T Consensus 90 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~ 169 (372)
T 1k8k_C 90 LVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIF 169 (372)
T ss_dssp EECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEE
Confidence 22456667999999999976 8899999999999987731 223336789999999999999999999999999999
Q ss_pred eCC------------------CCeEEEEEe-CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCcee-eeeCCCCCEEE
Q 021744 178 DCA------------------SGQCAGVIN-LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDL-SLSGPVGQVYA 234 (308)
Q Consensus 178 d~~------------------~~~~~~~~~-~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~~~~v~~ 234 (308)
|++ .++.+..+. +...+.++ .+++++|++++ |+.|++||+++++.+ .+..|...+.+
T Consensus 170 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~ 249 (372)
T 1k8k_C 170 SAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLA 249 (372)
T ss_dssp ECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEE
T ss_pred EcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEE
Confidence 954 677777775 66777766 47888888776 999999999998877 78889999999
Q ss_pred EEEeCC--EEEEEcCCCeEEEEEcCC--CCc----------------------------ccccc------eec-cccCCC
Q 021744 235 MAVGND--LLFAGTQDGAILAWKFNV--TTN----------------------------CFEPA------ASL-KVHTDS 275 (308)
Q Consensus 235 ~~~~~~--~l~~g~~dg~i~iwd~~~--~~~----------------------------~~~~~------~~~-~~~~~~ 275 (308)
++|+|+ ++++| .|+.|++|++.. +.. ..+.. ..+ .+|...
T Consensus 250 ~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 328 (372)
T 1k8k_C 250 VTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNS 328 (372)
T ss_dssp EEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSC
T ss_pred EEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCC
Confidence 999999 55555 999999999987 310 00010 333 489999
Q ss_pred eEE-EEe-cCC---CeEEEee-ceEEEEee
Q 021744 276 NRA-HFS-RDV---TSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 276 v~~-~~s-~d~---~~l~~s~-s~~i~~~~ 299 (308)
|.+ +|. ++| .+|++++ +..|.+|.
T Consensus 329 v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~ 358 (372)
T 1k8k_C 329 VSQISVLSGGKAKCSQFCTTGMDGGMSIWD 358 (372)
T ss_dssp EEEEEEEESTTTSCSEEEEEETTSEEEEEE
T ss_pred cceeEEecCCCcceeeEEEecCCCceEEEE
Confidence 999 766 666 7888665 66666654
No 61
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.6e-31 Score=233.62 Aligned_cols=249 Identities=15% Similarity=0.256 Sum_probs=206.8
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCccc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNI 102 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~ 102 (308)
+.++++++.|++|++||..++ . ....+.+|... +++++ +.. ++|+.|++|++||+.+++...
T Consensus 129 g~~l~sg~~dg~i~vwd~~~~-----------~-~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~- 193 (445)
T 2ovr_B 129 GNRIVSGSDDNTLKVWSAVTG-----------K-CLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIH- 193 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTC-----------C-EEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEE-
T ss_pred CCEEEEEECCCcEEEEECCCC-----------c-EEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEE-
Confidence 678999999999999998876 1 12234567766 66665 567 999999999999998876542
Q ss_pred ccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCC
Q 021744 103 NNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG 182 (308)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~ 182 (308)
....|...+.++.+. ...+++++.|+.|++||+.++ +.+..+.+|...|.++++ ++.++++++.|+.|++||++++
T Consensus 194 ~~~~h~~~v~~~~~~-~~~l~s~s~dg~i~~wd~~~~-~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~ 269 (445)
T 2ovr_B 194 TLYGHTSTVRCMHLH-EKRVVSGSRDATLRVWDIETG-QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETE 269 (445)
T ss_dssp EECCCSSCEEEEEEE-TTEEEEEETTSEEEEEESSSC-CEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGT
T ss_pred EECCCCCcEEEEEec-CCEEEEEeCCCEEEEEECCCC-cEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCC
Confidence 334566667777774 345699999999999999998 788899999999999999 6789999999999999999999
Q ss_pred eEEEEEe-CCCeeEEEEcCCCEEEEEc-CCcEEEEEcCCCcee-eeeCCCCCEEEEEEeCCEEEEEcCCCeEEEEEcCCC
Q 021744 183 QCAGVIN-LGGEVGCMISEGPWIFIGV-TNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 183 ~~~~~~~-~~~~v~~~~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~ 259 (308)
+++..+. +...+.++..++.++++++ |+.|++||+++++.. .+.+|...+.++.++++++++|+.||.|++||++++
T Consensus 270 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~ 349 (445)
T 2ovr_B 270 TCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG 349 (445)
T ss_dssp EEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTC
T ss_pred cEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCC
Confidence 9999888 7788888877999998876 999999999999887 788999999999998889999999999999999887
Q ss_pred Ccccccceeccc---cCCCeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 260 TNCFEPAASLKV---HTDSNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 260 ~~~~~~~~~~~~---~~~~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
+++..+.. |...|.+ +|+ +.+|++++ +..|.++.
T Consensus 350 ----~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd 388 (445)
T 2ovr_B 350 ----QCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWD 388 (445)
T ss_dssp ----CEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEE
T ss_pred ----cEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEE
Confidence 66666665 8888988 885 56777555 55555554
No 62
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.7e-32 Score=228.56 Aligned_cols=234 Identities=15% Similarity=0.199 Sum_probs=177.5
Q ss_pred ccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCC--cccc-cceeeeeeeeeeeecCCce-EEeeCCCeEEEEEc
Q 021744 64 ATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKN--SNIN-NRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTV 136 (308)
Q Consensus 64 ~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~ 136 (308)
+.+|... +++|+|+ + |+|+.|++|++||+..+.. .... ...|...+..+.|+|++.. ++++.|+.|++||+
T Consensus 10 ~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~ 87 (330)
T 2hes_X 10 LKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAK 87 (330)
T ss_dssp EECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred eccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEc
Confidence 4577777 7888887 7 9999999999999976532 1111 2237778999999999976 89999999999998
Q ss_pred CCC------ceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCC----CeEEEEEe-CCCeeEEE--EcCCCE
Q 021744 137 GDG------FKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCAS----GQCAGVIN-LGGEVGCM--ISEGPW 203 (308)
Q Consensus 137 ~~~------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~----~~~~~~~~-~~~~v~~~--~~~~~~ 203 (308)
... .+.+..+.+|...|.+++|+|++++|++++.|++|++||++. .+++..+. |...+.++ .|++++
T Consensus 88 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 167 (330)
T 2hes_X 88 EESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEAL 167 (330)
T ss_dssp -------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSE
T ss_pred ccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCE
Confidence 532 145678899999999999999999999999999999999953 24566666 77778776 478899
Q ss_pred EEEEc-CCcEEEEEcCCC--cee-eeeCCCCCEEEEEEeCC----EEEEEcCCCeEEEEEcCCCCc----ccccceeccc
Q 021744 204 IFIGV-TNFVKAWNTQTN--TDL-SLSGPVGQVYAMAVGND----LLFAGTQDGAILAWKFNVTTN----CFEPAASLKV 271 (308)
Q Consensus 204 l~~~~-d~~i~~wd~~~~--~~~-~~~~~~~~v~~~~~~~~----~l~~g~~dg~i~iwd~~~~~~----~~~~~~~~~~ 271 (308)
|++++ |++|++||..++ +++ .+.+|...|.+++|+|+ +|++|+.|+.|++||+..+.. .+.....+..
T Consensus 168 l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~ 247 (330)
T 2hes_X 168 LASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPD 247 (330)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCS
T ss_pred EEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeeccc
Confidence 99877 999999999876 344 78899999999999996 799999999999999975421 0123344444
Q ss_pred -cCCCeEE-EEecCCCeEEEeeceEEEEee
Q 021744 272 -HTDSNRA-HFSRDVTSLLGSVSFIMFIGQ 299 (308)
Q Consensus 272 -~~~~v~~-~~s~d~~~l~~s~s~~i~~~~ 299 (308)
|...|.+ +|++++.++.++.+..|.++.
T Consensus 248 ~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~ 277 (330)
T 2hes_X 248 VHKRQVYNVAWGFNGLIASVGADGVLAVYE 277 (330)
T ss_dssp CCSSCEEEEEECTTSCEEEEETTSCEEEEE
T ss_pred ccccceEEEEEcCCCEEEEEeCCCEEEEEE
Confidence 8899999 999876433344454444443
No 63
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.8e-33 Score=238.74 Aligned_cols=221 Identities=10% Similarity=0.039 Sum_probs=170.9
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCC-C-c
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSK-N-S 100 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~-~-~ 100 (308)
+.+||+++.|++|++|+...+. ......+.+|... +++|+|++++ ++++.|++|++||+.+++ . .
T Consensus 23 g~~l~~~~~d~~i~iw~~~~~~----------~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~ 92 (377)
T 3dwl_C 23 RTEFVTTTATNQVELYEQDGNG----------WKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQ 92 (377)
T ss_dssp SSEEECCCSSSCBCEEEEETTE----------EEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCC
T ss_pred CCEEEEecCCCEEEEEEccCCc----------eEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceee
Confidence 6789999999999999987640 0223345677777 8999999999 999999999999998776 1 1
Q ss_pred ccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCce--eeeEeeC-cccceEEEEEeCCCCEEEEeeCCCcEEE
Q 021744 101 NINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFK--LLTQLEG-HQKVVSGITLPSGSDKLYSGSKDETVRV 176 (308)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~--~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~dg~v~~ 176 (308)
......|...+.++.|+|++.. ++++.|+.|++||++++.. ....+.+ |...|.+++|+|++++|++++.|++|++
T Consensus 93 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~i 172 (377)
T 3dwl_C 93 TLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYV 172 (377)
T ss_dssp EEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEE
T ss_pred eeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEE
Confidence 1234557777999999999866 8999999999999998722 4677887 9999999999999999999999999999
Q ss_pred EeCCC------------------CeEEEEEeCCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCce----e-eeeCCCC
Q 021744 177 WDCAS------------------GQCAGVINLGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTD----L-SLSGPVG 230 (308)
Q Consensus 177 wd~~~------------------~~~~~~~~~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~----~-~~~~~~~ 230 (308)
||++. ++++..+.+...+.++ .+++++|++++ |+.|++||+++++. + .+..|..
T Consensus 173 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 252 (377)
T 3dwl_C 173 LSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQL 252 (377)
T ss_dssp EEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSS
T ss_pred EEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCC
Confidence 99852 4455555566777766 47888888776 99999999999876 4 7889999
Q ss_pred CEEEEEEeCC--EEEEEcCCCeEEEEEcC
Q 021744 231 QVYAMAVGND--LLFAGTQDGAILAWKFN 257 (308)
Q Consensus 231 ~v~~~~~~~~--~l~~g~~dg~i~iwd~~ 257 (308)
.|.+++|+|+ +|++++.++.+ +|+..
T Consensus 253 ~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 253 PLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred ceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 9999999999 77777766655 66665
No 64
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.8e-31 Score=224.48 Aligned_cols=254 Identities=17% Similarity=0.196 Sum_probs=197.1
Q ss_pred CceEEecCCCeEEEeecCCCCCCCCCcccccCCCC-CCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCccc
Q 021744 27 GLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLP-PAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNI 102 (308)
Q Consensus 27 ~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~-~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~ 102 (308)
++||+| .|++|++||+.+++ ... ....+|... +++|+|++++ ++|+.|++|++||+++++.+..
T Consensus 37 ~~lAvg-~D~tV~iWd~~tg~-----------~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 37 NVLAVA-LDNSVYLWSASSGD-----------ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 104 (318)
T ss_dssp SEEEEE-ETTEEEEEETTTCC-----------EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CEEEEE-eCCEEEEEECCCCC-----------EEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE
Confidence 466665 59999999998871 111 123356555 8999999999 9999999999999988865532
Q ss_pred ccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCC
Q 021744 103 NNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCAS 181 (308)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~ 181 (308)
...|...+. .+.+.+.. ++++.++.+++|+.......+..+.+|...+..+.++++++++++++.|++|++||+++
T Consensus 105 -~~~h~~~~~--~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 105 -MTSHSARVG--SLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp -EECCSSCEE--EEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred -ecCccceEE--EeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCC
Confidence 233444343 34444544 88999999999999887677888999999999999999999999999999999999998
Q ss_pred CeEE----EEEe-CCCeeEEE--EcC-CCEEE--EEc-CCcEEEEEcCCCceeeeeCCCCCEEEEEEeCC--EEE--EEc
Q 021744 182 GQCA----GVIN-LGGEVGCM--ISE-GPWIF--IGV-TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LLF--AGT 246 (308)
Q Consensus 182 ~~~~----~~~~-~~~~v~~~--~~~-~~~l~--~~~-d~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~--~l~--~g~ 246 (308)
++.. .... +...+.++ .+. ...+. +++ ++.|++||.+.........+...+..+.|+|+ .++ +|+
T Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~ 261 (318)
T 4ggc_A 182 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGF 261 (318)
T ss_dssp BTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECT
T ss_pred CcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEc
Confidence 6532 2222 55566655 344 34443 334 78999999999988877778889999999998 444 455
Q ss_pred CCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 247 QDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 247 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
.|+.|++||++++ +++.++.+|...|++ +|+||+++|++++ +..|.+|.
T Consensus 262 ~d~~i~iwd~~~~----~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd 312 (318)
T 4ggc_A 262 AQNQLVIWKYPTM----AKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWR 312 (318)
T ss_dssp TTCCEEEEETTTC----CEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEEC
T ss_pred CCCEEEEEECCCC----cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEE
Confidence 8999999999987 788999999999999 9999999999665 66666664
No 65
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.9e-31 Score=229.56 Aligned_cols=266 Identities=11% Similarity=0.051 Sum_probs=190.0
Q ss_pred CCCceEEecCC-------CeEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCe------------eeccC
Q 021744 25 GGGLSTADTRQ-------KVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWG------------RNNNF 85 (308)
Q Consensus 25 ~~~~~~s~s~d-------~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~------------~s~~~ 85 (308)
.+.+||+|+.| +.|++|+...........++.. ....+.+|+...++++++++. ++++.
T Consensus 25 dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~--~~~~l~~~~~~v~s~~~~~~~~~~g~~~~~~~l~s~~~ 102 (365)
T 4h5i_A 25 NDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHIL--SEFALEDNDDSPTAIDASKGIILVGCNENSTKITQGKG 102 (365)
T ss_dssp TTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEE--EEEECCTTSCCCCEEEEETTEEEEECCCCHHHHHHTSC
T ss_pred CCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeee--eEEEccCCCCceEEEEeCCCEEEEEECCCccEEEEecC
Confidence 35678887654 3699999876522111000000 001233455443444555443 45678
Q ss_pred CCcEEEEECCCCCCcccc--------cceeeeeeeeeeeecCCce---EEeeCCCeEEEEEcCCCceeeeEeeCcccceE
Q 021744 86 NNHSNNYRAGNSKNSNIN--------NRAVIKTDILCRNWVQGNC---MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVS 154 (308)
Q Consensus 86 d~~i~vwd~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~---~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~ 154 (308)
|+++|+|++++.+..... ...+...+..++|+|+|.. ++++.|++|+|||++++ +.+..+. |...|.
T Consensus 103 d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~-~~~~~~~-~~~~V~ 180 (365)
T 4h5i_A 103 NKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDL-TEKFEIE-TRGEVK 180 (365)
T ss_dssp CCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTT-EEEEEEE-CSSCCC
T ss_pred CCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCC-cEEEEeC-CCCceE
Confidence 899999998655322111 1112233778999999976 35568999999999998 7777776 778999
Q ss_pred EEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe---CCCeeEEE--EcCCCEEEEEc-CC----cEEEEEcCCCcee-
Q 021744 155 GITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN---LGGEVGCM--ISEGPWIFIGV-TN----FVKAWNTQTNTDL- 223 (308)
Q Consensus 155 ~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~---~~~~v~~~--~~~~~~l~~~~-d~----~i~~wd~~~~~~~- 223 (308)
+++|+|+++++++++.+ .+.+|+..+++.+.... +...+.++ .++++++++++ ++ .+++||+......
T Consensus 181 ~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~ 259 (365)
T 4h5i_A 181 DLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSV 259 (365)
T ss_dssp EEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEE
T ss_pred EEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecc
Confidence 99999999999999865 56677777776655443 55566655 68899888765 55 6888998876532
Q ss_pred ----eeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCccccccee-ccccCCCeEE-EEecCCCeEEEee-ceE
Q 021744 224 ----SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAAS-LKVHTDSNRA-HFSRDVTSLLGSV-SFI 294 (308)
Q Consensus 224 ----~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~v~~-~~s~d~~~l~~s~-s~~ 294 (308)
.+.+|...|++++|+|+ +||+|+.|+.|+|||++++ +++.+ +.+|...|++ +|+|||++|++++ +.+
T Consensus 260 ~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~----~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~t 335 (365)
T 4h5i_A 260 LRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL----SMSKIFKQAHSFAITEVTISPDSTYVASVSAANT 335 (365)
T ss_dssp EEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT----EEEEEETTSSSSCEEEEEECTTSCEEEEEETTSE
T ss_pred eeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC----cEEEEecCcccCCEEEEEECCCCCEEEEEeCCCe
Confidence 56789999999999999 9999999999999999987 77776 4789999999 9999999999655 655
Q ss_pred EEEee
Q 021744 295 MFIGQ 299 (308)
Q Consensus 295 i~~~~ 299 (308)
|.++.
T Consensus 336 vrvw~ 340 (365)
T 4h5i_A 336 IHIIK 340 (365)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55554
No 66
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.1e-31 Score=253.39 Aligned_cols=257 Identities=13% Similarity=0.166 Sum_probs=214.8
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcc
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSN 101 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~ 101 (308)
.+.++|+++.|++|++||..++ . ....+.+|... +++|+|+++. ++++.|++|++||+.+++...
T Consensus 24 ~~~~la~~~~~g~v~iwd~~~~-----------~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~ 91 (814)
T 3mkq_A 24 TEPWVLTTLYSGRVEIWNYETQ-----------V-EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV 91 (814)
T ss_dssp SSSEEEEEETTSEEEEEETTTT-----------E-EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCEEEEEeCCCEEEEEECCCC-----------c-eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 3678999999999999998876 1 12233456666 8999999999 999999999999998876543
Q ss_pred cccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeC-CCCEEEEeeCCCcEEEEeC
Q 021744 102 INNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPS-GSDKLYSGSKDETVRVWDC 179 (308)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~dg~v~~wd~ 179 (308)
....|...+..+.|+|++.. ++++.|+.|++||+.++......+.+|...|.+++|+| ++..+++++.||+|++||+
T Consensus 92 -~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~ 170 (814)
T 3mkq_A 92 -DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL 170 (814)
T ss_dssp -EEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEET
T ss_pred -EEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 33457777999999999976 88999999999999987567788899999999999999 7889999999999999999
Q ss_pred CCCeEEEEEe--CCCeeEEE--Ec--CCCEEEEEc-CCcEEEEEcCCCcee-eeeCCCCCEEEEEEeCC--EEEEEcCCC
Q 021744 180 ASGQCAGVIN--LGGEVGCM--IS--EGPWIFIGV-TNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDG 249 (308)
Q Consensus 180 ~~~~~~~~~~--~~~~v~~~--~~--~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~~~~v~~~~~~~~--~l~~g~~dg 249 (308)
.+++....+. +...+.++ .+ ++.++++++ |+.|++||+++++.. .+.+|...|.+++|+|+ ++++++.||
T Consensus 171 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 250 (814)
T 3mkq_A 171 GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDG 250 (814)
T ss_dssp TCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTS
T ss_pred CCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC
Confidence 9888777776 32555554 45 788999877 999999999999877 78889999999999999 999999999
Q ss_pred eEEEEEcCCCCcccccceeccccCCCeEE-EEecCCC--eEEEeeceEEEEe
Q 021744 250 AILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVT--SLLGSVSFIMFIG 298 (308)
Q Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~--~l~~s~s~~i~~~ 298 (308)
.|++||+.++ +.+..+..|...+.+ +|+|++. +++++.+..+.++
T Consensus 251 ~v~vwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (814)
T 3mkq_A 251 TLKIWNSSTY----KVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVL 298 (814)
T ss_dssp CEEEEETTTC----SEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEE
T ss_pred eEEEEECCCC----cEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEE
Confidence 9999999987 778888889999999 9999987 3555554444333
No 67
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.3e-32 Score=235.12 Aligned_cols=266 Identities=10% Similarity=0.093 Sum_probs=206.7
Q ss_pred CC-ceEEecCCCeEEEeec----CCCCC-----CCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEE
Q 021744 26 GG-LSTADTRQKVCNYWRA----GKCNR-----FPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNY 92 (308)
Q Consensus 26 ~~-~~~s~s~d~~i~~W~~----~~~~~-----~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vw 92 (308)
+. +||+++.|+.|++|+. .++.. ....+.+ .........+|... +++|+|++.+ ++++.|++|++|
T Consensus 57 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~ 135 (425)
T 1r5m_A 57 DESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRH-PFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLW 135 (425)
T ss_dssp CTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEEC-CCCCC------CBCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CCcEEEEecCCceEEEEEEecccCCccccccccccccccc-cccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 44 8999999999999999 66521 0000111 11111112235545 8999999999 999999999999
Q ss_pred ECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccc---------------eEEE
Q 021744 93 RAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKV---------------VSGI 156 (308)
Q Consensus 93 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~---------------v~~~ 156 (308)
|. +++.. .....|...+..+.|+|++.. ++++.|+.|++||+.++ +.+..+..+... +.++
T Consensus 136 ~~-~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (425)
T 1r5m_A 136 NK-TGALL-NVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISG-TVMQHFELKETGGSSINAENHSGDGSLGVDV 212 (425)
T ss_dssp ET-TSCEE-EEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTT-EEEEEECCC---------------CCCBSCC
T ss_pred eC-CCCee-eeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCC-cEEEEeeccccCccceeeccccCCcceeeEE
Confidence 94 33332 234557777999999999976 88999999999999998 788888887776 9999
Q ss_pred EEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe-CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCcee-eeeCCCCC
Q 021744 157 TLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN-LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDL-SLSGPVGQ 231 (308)
Q Consensus 157 ~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~~~~ 231 (308)
+|+|+ ..+++++.|+.|++||+++++.+..+. +...+.++ .+++++|++++ |+.|++||+++++.. .+..|...
T Consensus 213 ~~~~~-~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 291 (425)
T 1r5m_A 213 EWVDD-DKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQS 291 (425)
T ss_dssp EEEET-TEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSC
T ss_pred EEcCC-CEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCcc
Confidence 99987 468899999999999999998888886 66777765 57888888776 999999999998776 67789999
Q ss_pred EEEEEEeCC-EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee-c--eEEEEeec
Q 021744 232 VYAMAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV-S--FIMFIGQN 300 (308)
Q Consensus 232 v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-s--~~i~~~~~ 300 (308)
|.+++|+|+ ++++++.|+.|++||++++ +.+..+..|...+.+ +|+|++++|++++ + +.+|-..+
T Consensus 292 i~~~~~~~~~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~ 361 (425)
T 1r5m_A 292 IVSASWVGDDKVISCSMDGSVRLWSLKQN----TLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKK 361 (425)
T ss_dssp EEEEEEETTTEEEEEETTSEEEEEETTTT----EEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHH
T ss_pred EEEEEECCCCEEEEEeCCCcEEEEECCCC----cEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCC
Confidence 999999999 9999999999999999987 778888889999999 9999999998666 4 44444433
No 68
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=4.2e-31 Score=234.25 Aligned_cols=242 Identities=14% Similarity=0.188 Sum_probs=193.4
Q ss_pred CceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEe--cCCCe-eeccCCCcEEEEECCCCCCcc
Q 021744 27 GLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFA--NNTWG-RNNNFNNHSNNYRAGNSKNSN 101 (308)
Q Consensus 27 ~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s--~~g~~-~s~~~d~~i~vwd~~~~~~~~ 101 (308)
.++++++.|++|++||..++ . ....+.+|... +++|+ +++.+ ++++.|++|++||+.+++...
T Consensus 174 ~~l~s~s~dg~i~vwd~~~~-----------~-~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~ 241 (464)
T 3v7d_B 174 GILVSGSTDRTVRVWDIKKG-----------C-CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVP 241 (464)
T ss_dssp TEEEEEETTSCEEEEETTTT-----------E-EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC-
T ss_pred CEEEEEeCCCCEEEEECCCC-----------c-EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccc
Confidence 38999999999999998876 1 12234466666 78888 46677 999999999999997665331
Q ss_pred c----------------------ccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEE
Q 021744 102 I----------------------NNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITL 158 (308)
Q Consensus 102 ~----------------------~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~ 158 (308)
. ....|...+.. +.+++.. ++++.|+.|++||+.++ +.+..+.+|...|.+++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~v~~~~~ 318 (464)
T 3v7d_B 242 DHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRT--VSGHGNIVVSGSYDNTLIVWDVAQM-KCLYILSGHTDRIYSTIY 318 (464)
T ss_dssp -----CCSSEEESCGGGCTTEEEEECCCSSCEEE--EEEETTEEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEE
T ss_pred cccccCCcceEeeccCCCeEEEEEccCccceEEE--EcCCCCEEEEEeCCCeEEEEECCCC-cEEEEecCCCCCEEEEEE
Confidence 1 11222233333 3566655 89999999999999998 889999999999999999
Q ss_pred eCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe-CCCeeEEEEcCCCEEEEEc-CCcEEEEEcCCCceeeeeCCCCCEEEEE
Q 021744 159 PSGSDKLYSGSKDETVRVWDCASGQCAGVIN-LGGEVGCMISEGPWIFIGV-TNFVKAWNTQTNTDLSLSGPVGQVYAMA 236 (308)
Q Consensus 159 ~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~-d~~i~~wd~~~~~~~~~~~~~~~v~~~~ 236 (308)
+|+++++++++.|++|++||+++++++..+. +...+.++..+++++++++ |+.|++||+++.+......+...+..++
T Consensus 319 ~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~ 398 (464)
T 3v7d_B 319 DHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITT 398 (464)
T ss_dssp ETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEE
T ss_pred cCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEE
Confidence 9999999999999999999999999999997 7788888877788888766 9999999999987764445667778888
Q ss_pred EeCC--EEEEEcCCCeEEEEEcCCCCccccccee-ccccCCCeEE-EEecCCCeEEEe
Q 021744 237 VGND--LLFAGTQDGAILAWKFNVTTNCFEPAAS-LKVHTDSNRA-HFSRDVTSLLGS 290 (308)
Q Consensus 237 ~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~v~~-~~s~d~~~l~~s 290 (308)
|+|+ ++++|+ ||.|++||++++ +++.. +..|...|.. +|+ ++.++++
T Consensus 399 ~~~~~~~l~~~~-dg~i~iwd~~~g----~~~~~~~~~~~~~v~~v~~~--~~~l~~~ 449 (464)
T 3v7d_B 399 FYVSDNILVSGS-ENQFNIYNLRSG----KLVHANILKDADQIWSVNFK--GKTLVAA 449 (464)
T ss_dssp EEECSSEEEEEE-TTEEEEEETTTC----CEEESCTTTTCSEEEEEEEE--TTEEEEE
T ss_pred EEeCCCEEEEec-CCeEEEEECCCC----cEEehhhccCCCcEEEEEec--CCEEEEE
Confidence 8888 788877 899999999997 55654 6678888998 997 4455533
No 69
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.2e-33 Score=238.29 Aligned_cols=228 Identities=11% Similarity=0.015 Sum_probs=179.3
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCC-CcccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCc--eeeeE
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSK-NSNINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGF--KLLTQ 145 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~--~~~~~ 145 (308)
+++|+|++++ ++++.|++|++||+.++. ........|...+..+.|+|++.. ++++.|+.|++||+.++. .....
T Consensus 16 ~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~ 95 (377)
T 3dwl_C 16 EHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLV 95 (377)
T ss_dssp CCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEE
T ss_pred EEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeE
Confidence 7999999999 999999999999998763 233345678888999999999865 899999999999999872 25667
Q ss_pred eeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeE---EEEEe--CCCeeEEE--EcCCCEEEEEc-CCcEEEEEc
Q 021744 146 LEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQC---AGVIN--LGGEVGCM--ISEGPWIFIGV-TNFVKAWNT 217 (308)
Q Consensus 146 ~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~---~~~~~--~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~ 217 (308)
+.+|...|.+++|+|++++|++++.|+.|++||+++++. ...+. +...+.++ .+++++|++++ |+.|++||+
T Consensus 96 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 175 (377)
T 3dwl_C 96 LLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSA 175 (377)
T ss_dssp CCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEE
T ss_pred ecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEE
Confidence 788999999999999999999999999999999998873 56665 67778776 47888999776 999999999
Q ss_pred CC------------------Ccee-eeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCe
Q 021744 218 QT------------------NTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSN 276 (308)
Q Consensus 218 ~~------------------~~~~-~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v 276 (308)
++ +++. .+ .|...|.+++|+|+ +|++++.||.|++||+.++......+..+..|...+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v 254 (377)
T 3dwl_C 176 YVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPL 254 (377)
T ss_dssp CCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCE
T ss_pred EecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCce
Confidence 63 3333 44 89999999999999 899999999999999998732111277888999999
Q ss_pred EE-EEecCCCeEEEeeceEEEEee
Q 021744 277 RA-HFSRDVTSLLGSVSFIMFIGQ 299 (308)
Q Consensus 277 ~~-~~s~d~~~l~~s~s~~i~~~~ 299 (308)
.+ +|+|++++|+++.+..+.++.
T Consensus 255 ~~~~~s~~~~~l~~~~~~~~~~~~ 278 (377)
T 3dwl_C 255 RSLLWANESAIVAAGYNYSPILLQ 278 (377)
T ss_dssp EEEEEEETTEEEEEESSSSEEEEC
T ss_pred EEEEEcCCCCEEEEEcCCcEEEEE
Confidence 99 999999999877643333443
No 70
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=8.4e-33 Score=233.42 Aligned_cols=223 Identities=11% Similarity=0.054 Sum_probs=175.8
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEec--CCCe-eeccCCCcEEEEECCCCCCc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFAN--NTWG-RNNNFNNHSNNYRAGNSKNS 100 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~--~g~~-~s~~~d~~i~vwd~~~~~~~ 100 (308)
+.+|||++.|++|++||...+. ......+.+|... +++|+| ++.+ ++|+.|++|++||+.+++..
T Consensus 25 g~~lasgs~D~~v~lwd~~~~~----------~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~ 94 (316)
T 3bg1_A 25 GTRLATCSSDRSVKIFDVRNGG----------QILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWE 94 (316)
T ss_dssp GCEEEEEETTTEEEEEEEETTE----------EEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCC
T ss_pred CCEEEEEeCCCeEEEEEecCCC----------cEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcce
Confidence 5789999999999999987651 0112235688877 899975 4777 99999999999999876422
Q ss_pred -ccccceeeeeeeeeeeecC--Cc-eEEeeCCCeEEEEEcCCCc--eeeeEeeCcccceEEEEEeCC-------------
Q 021744 101 -NINNRAVIKTDILCRNWVQ--GN-CMYGEKCKFLHSWTVGDGF--KLLTQLEGHQKVVSGITLPSG------------- 161 (308)
Q Consensus 101 -~~~~~~~~~~~~~~~~~~~--~~-~~~g~~d~~i~iwd~~~~~--~~~~~~~~h~~~v~~~~~~~~------------- 161 (308)
......|...+..+.|+|+ +. +++|+.|+.|++||+.+.. .....+.+|...|.+++|+|+
T Consensus 95 ~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~ 174 (316)
T 3bg1_A 95 KSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQ 174 (316)
T ss_dssp EEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSC
T ss_pred EEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccccccccc
Confidence 1233457777999999997 54 4899999999999998752 224566789999999999997
Q ss_pred ----CCEEEEeeCCCcEEEEeCCCC---eEEEEEe-CCCeeEEEE--cCC----CEEEEEc-CCcEEEEEcCCC---c--
Q 021744 162 ----SDKLYSGSKDETVRVWDCASG---QCAGVIN-LGGEVGCMI--SEG----PWIFIGV-TNFVKAWNTQTN---T-- 221 (308)
Q Consensus 162 ----~~~l~s~s~dg~v~~wd~~~~---~~~~~~~-~~~~v~~~~--~~~----~~l~~~~-d~~i~~wd~~~~---~-- 221 (308)
+.+|++++.|++|++||++.. +++..+. |...+.++. |++ ++|++++ |++|++||+++. +
T Consensus 175 ~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~ 254 (316)
T 3bg1_A 175 KPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWS 254 (316)
T ss_dssp CCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCB
T ss_pred CccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchh
Confidence 468999999999999999865 3455555 777788773 554 7788776 999999999863 1
Q ss_pred eeeeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCC
Q 021744 222 DLSLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNV 258 (308)
Q Consensus 222 ~~~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~ 258 (308)
...+..|...|++++|+|+ +|++++.|+.|++|+...
T Consensus 255 ~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 255 PKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp CCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred hhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 2245678899999999999 899999999999999864
No 71
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.3e-31 Score=261.98 Aligned_cols=257 Identities=17% Similarity=0.175 Sum_probs=217.9
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcc
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSN 101 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~ 101 (308)
.+.++|+++.|++|++||..++ . ....+.+|... +++|+|++++ ++++.|++|++||+.+++...
T Consensus 626 ~~~~l~s~~~d~~i~vw~~~~~-----------~-~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~ 693 (1249)
T 3sfz_A 626 DGQRIASCGADKTLQVFKAETG-----------E-KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVH 693 (1249)
T ss_dssp TSSEEEEEETTSCEEEEETTTC-----------C-EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCC-----------C-EEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 4678999999999999999887 1 12234467777 8999999999 999999999999998886543
Q ss_pred cccceeeeeeeeeeeecCC--ce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEe
Q 021744 102 INNRAVIKTDILCRNWVQG--NC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWD 178 (308)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~--~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd 178 (308)
....|...+.++.|++++ .. ++|+.|+.|++||+.++ +.+..+.+|...|.+++|+|+++++++++.||+|++||
T Consensus 694 -~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~-~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd 771 (1249)
T 3sfz_A 694 -TYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQK-ECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWD 771 (1249)
T ss_dssp -EEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSS-SEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEE
T ss_pred -EEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCc-chhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEe
Confidence 334677779999999964 33 88999999999999999 78889999999999999999999999999999999999
Q ss_pred CCCCeEEEEEeCCC--------------eeEE--EEcCCCEEEEEcCCcEEEEEcCCCcee-e-eeCCCCCEEEEEEeCC
Q 021744 179 CASGQCAGVINLGG--------------EVGC--MISEGPWIFIGVTNFVKAWNTQTNTDL-S-LSGPVGQVYAMAVGND 240 (308)
Q Consensus 179 ~~~~~~~~~~~~~~--------------~v~~--~~~~~~~l~~~~d~~i~~wd~~~~~~~-~-~~~~~~~v~~~~~~~~ 240 (308)
+++++....+.... .+.+ +.++++.++++.++.+.+||+.++... . ..+|...+.+++|+|+
T Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~ 851 (1249)
T 3sfz_A 772 VRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPY 851 (1249)
T ss_dssp GGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSS
T ss_pred CCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCC
Confidence 99998887775221 2333 357899999988999999999998877 3 3488999999999999
Q ss_pred --EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 241 --LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 241 --~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
++++++.||.|++||+.++ ..+..+.+|...|.+ +|+|++.++++++ +..+.++.
T Consensus 852 ~~~l~~~~~dg~v~vwd~~~~----~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~ 910 (1249)
T 3sfz_A 852 DHLAVIALSQYCVELWNIDSR----LKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE 910 (1249)
T ss_dssp TTEEEEECSSSCEEEEETTTT----EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCEEEEEeCCCeEEEEEcCCC----ceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 9999999999999999987 778889999999999 9999999988665 55555544
No 72
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=5.8e-31 Score=244.75 Aligned_cols=231 Identities=19% Similarity=0.210 Sum_probs=190.1
Q ss_pred Cccccccc--eeEEecCC-Ce-eeccCCCcEEEEECCCCCCc----ccccceeeeeeeeeeeecCCce-EEeeCCCeEEE
Q 021744 63 AATANGAA--AKRFANNT-WG-RNNNFNNHSNNYRAGNSKNS----NINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHS 133 (308)
Q Consensus 63 ~~~gh~~~--~i~~s~~g-~~-~s~~~d~~i~vwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~i 133 (308)
.+.+|... +++++|++ .+ +||+.|++|++||+.+.... .....+|...+.++.|++++.. ++|+.|+.|++
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~v 456 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 456 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEE
Confidence 35689888 89999876 45 99999999999999764322 1234567778999999999976 89999999999
Q ss_pred EEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe----CCCeeEEE--EcCC--CEEE
Q 021744 134 WTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN----LGGEVGCM--ISEG--PWIF 205 (308)
Q Consensus 134 wd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~----~~~~v~~~--~~~~--~~l~ 205 (308)
||+.++ +.+..+.+|...|.+++|+|++++|++++.|++|++||+.......... |...+.++ .+++ ..++
T Consensus 457 wd~~~~-~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 535 (694)
T 3dm0_A 457 WDLAAG-VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIV 535 (694)
T ss_dssp EETTTT-EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEE
T ss_pred EECCCC-cceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEE
Confidence 999998 7888999999999999999999999999999999999987554433322 45567776 3443 4677
Q ss_pred EEc-CCcEEEEEcCCCcee-eeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EE
Q 021744 206 IGV-TNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HF 280 (308)
Q Consensus 206 ~~~-d~~i~~wd~~~~~~~-~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~ 280 (308)
+++ |++|++||+++.+.. .+.+|...|++++|+|+ +|++|+.||.|++||+.++ +.+..+.. ...+.+ +|
T Consensus 536 s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~----~~~~~~~~-~~~v~~~~~ 610 (694)
T 3dm0_A 536 SASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG----KKLYSLEA-NSVIHALCF 610 (694)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTT----EEEECCBC-SSCEEEEEE
T ss_pred EEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC----ceEEEecC-CCcEEEEEE
Confidence 766 999999999998877 78899999999999999 9999999999999999987 55666654 456778 99
Q ss_pred ecCCCeEEEeeceEEEEee
Q 021744 281 SRDVTSLLGSVSFIMFIGQ 299 (308)
Q Consensus 281 s~d~~~l~~s~s~~i~~~~ 299 (308)
+|++.+|+++.+..|.++.
T Consensus 611 sp~~~~l~~~~~~~i~iwd 629 (694)
T 3dm0_A 611 SPNRYWLCAATEHGIKIWD 629 (694)
T ss_dssp CSSSSEEEEEETTEEEEEE
T ss_pred cCCCcEEEEEcCCCEEEEE
Confidence 9999998887755555554
No 73
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4.6e-31 Score=224.05 Aligned_cols=223 Identities=15% Similarity=0.239 Sum_probs=182.5
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcc
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSN 101 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~ 101 (308)
.+.+|++++.|+.|++|+..... . ......+... .+.+++++.. ++++.|+.+++||+.......
T Consensus 97 dg~~l~s~~~d~~i~~~~~~~~~-----------~-~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~ 164 (340)
T 4aow_A 97 DGQFALSGSWDGTLRLWDLTTGT-----------T-TRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT 164 (340)
T ss_dssp TSSEEEEEETTSEEEEEETTTTE-----------E-EEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEE
T ss_pred CCCEEEEEcccccceEEeecccc-----------e-eeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEE
Confidence 36789999999999999987651 1 1111122222 6788899999 999999999999997665554
Q ss_pred cccceeeeeeeeeeeecCCc---eEEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEe
Q 021744 102 INNRAVIKTDILCRNWVQGN---CMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWD 178 (308)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~---~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd 178 (308)
.....|...+..+.+.+++. .++++.|+.|++||+.+. +.+..+.+|.+.|.+++|+|++++|++++.|++|++||
T Consensus 165 ~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~-~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd 243 (340)
T 4aow_A 165 VQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 243 (340)
T ss_dssp ECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred EEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCC-ceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 45566777788888887662 378999999999999998 88899999999999999999999999999999999999
Q ss_pred CCCCeEEEEEeCCCeeEEE--EcCCCEEEEEcCCcEEEEEcCCCcee-e---------eeCCCCCEEEEEEeCC--EEEE
Q 021744 179 CASGQCAGVINLGGEVGCM--ISEGPWIFIGVTNFVKAWNTQTNTDL-S---------LSGPVGQVYAMAVGND--LLFA 244 (308)
Q Consensus 179 ~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~d~~i~~wd~~~~~~~-~---------~~~~~~~v~~~~~~~~--~l~~ 244 (308)
+++.+++..+.....+.++ .+++.+++++.|+.|++||++++... . ...|...|++++|+|+ +|++
T Consensus 244 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s 323 (340)
T 4aow_A 244 LNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFA 323 (340)
T ss_dssp TTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEE
T ss_pred eccCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEE
Confidence 9999999999977777766 35666666777999999999987654 2 3468889999999999 9999
Q ss_pred EcCCCeEEEEEcCCCC
Q 021744 245 GTQDGAILAWKFNVTT 260 (308)
Q Consensus 245 g~~dg~i~iwd~~~~~ 260 (308)
|+.||.|+|||+++++
T Consensus 324 gs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 324 GYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EETTSCEEEEEEEC--
T ss_pred EeCCCEEEEEeCCCcC
Confidence 9999999999999873
No 74
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.3e-31 Score=226.26 Aligned_cols=246 Identities=10% Similarity=0.057 Sum_probs=195.2
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCccc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNI 102 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~ 102 (308)
+.+|++++.|+.|++|+..... ......+.+|... +++|+|++.+ ++++.|++|++||+.+++..
T Consensus 54 g~~l~~~~~dg~i~iw~~~~~~----------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~-- 121 (368)
T 3mmy_A 54 GNFLIAGSWANDVRCWEVQDSG----------QTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAI-- 121 (368)
T ss_dssp SEEEEEEETTSEEEEEEECTTS----------CEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE--
T ss_pred ceEEEEECCCCcEEEEEcCCCC----------ceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCce--
Confidence 5789999999999999988630 2222345567766 8999999999 99999999999999887655
Q ss_pred ccceeeeeeeeeee--ecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeC
Q 021744 103 NNRAVIKTDILCRN--WVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDC 179 (308)
Q Consensus 103 ~~~~~~~~~~~~~~--~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~ 179 (308)
....|...+..+.| .+++.. ++++.|+.|++||++++ +.+..+..|. .+.++.+.+ ..+++++.++.+++|++
T Consensus 122 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~i~~~~~ 197 (368)
T 3mmy_A 122 QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSS-NPMMVLQLPE-RCYCADVIY--PMAVVATAERGLIVYQL 197 (368)
T ss_dssp EEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCS-SCSEEEECSS-CEEEEEEET--TEEEEEEGGGCEEEEEC
T ss_pred eeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCC-cEEEEEecCC-CceEEEecC--CeeEEEeCCCcEEEEEe
Confidence 35567777999999 778765 89999999999999998 7788888664 666666664 48899999999999999
Q ss_pred CCCeEEEEEe---CCCeeE--EEEcCCCE----EEEEc-CCcEEEEEcCCCce---e-eeeCCCC------------CEE
Q 021744 180 ASGQCAGVIN---LGGEVG--CMISEGPW----IFIGV-TNFVKAWNTQTNTD---L-SLSGPVG------------QVY 233 (308)
Q Consensus 180 ~~~~~~~~~~---~~~~v~--~~~~~~~~----l~~~~-d~~i~~wd~~~~~~---~-~~~~~~~------------~v~ 233 (308)
+......... ...... ++.++... +++++ |+.|++||++.... . .+..|.. .|+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 277 (368)
T 3mmy_A 198 ENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVN 277 (368)
T ss_dssp SSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEE
T ss_pred ccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceE
Confidence 9765443332 222333 33443332 66555 99999999998732 2 5666665 799
Q ss_pred EEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee
Q 021744 234 AMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV 291 (308)
Q Consensus 234 ~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~ 291 (308)
+++|+|+ +|++++.||.|++||+.++ +++..+..|...+.+ +|+|++++|++++
T Consensus 278 ~~~~sp~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~v~~~~~s~~g~~l~~~s 334 (368)
T 3mmy_A 278 GIAFHPVHGTLATVGSDGRFSFWDKDAR----TKLKTSEQLDQPISACCFNHNGNIFAYAS 334 (368)
T ss_dssp EEEECTTTCCEEEEETTSCEEEEETTTT----EEEEECCCCSSCEEEEEECTTSSCEEEEE
T ss_pred EEEEecCCCEEEEEccCCeEEEEECCCC----cEEEEecCCCCCceEEEECCCCCeEEEEe
Confidence 9999999 9999999999999999987 778889999999999 9999999999665
No 75
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.1e-31 Score=225.41 Aligned_cols=244 Identities=9% Similarity=-0.018 Sum_probs=196.7
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCC-e-eeccCCCcEEEEEC-CCCCCc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTW-G-RNNNFNNHSNNYRA-GNSKNS 100 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~-~-~s~~~d~~i~vwd~-~~~~~~ 100 (308)
+.+|++++.|+.|++|+........ ......+|... +++|+|++. + ++++.|++|++||+ .+++..
T Consensus 23 ~~~l~~~~~d~~v~iw~~~~~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~ 93 (342)
T 1yfq_A 23 KSLLLITSWDGSLTVYKFDIQAKNV---------DLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQ 93 (342)
T ss_dssp GTEEEEEETTSEEEEEEEETTTTEE---------EEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEE
T ss_pred CCEEEEEcCCCeEEEEEeCCCCccc---------cceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceE
Confidence 5689999999999999988761100 01122356555 899999999 8 99999999999999 877553
Q ss_pred ccccce--eeeeeeeeeeecCCce-EEeeCCCeEEEEEcCC---------CceeeeEeeCcccceEEEEEeCCCCEEEEe
Q 021744 101 NINNRA--VIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGD---------GFKLLTQLEGHQKVVSGITLPSGSDKLYSG 168 (308)
Q Consensus 101 ~~~~~~--~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~---------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 168 (308)
.... |...+..+.|++ +.. ++++.|+.|++||+++ . +.+..+. |...|.+++|+|++ ++++
T Consensus 94 --~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~-~~~~v~~~~~~~~~--l~~~ 166 (342)
T 1yfq_A 94 --ALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKN-LNSNNTK-VKNKIFTMDTNSSR--LIVG 166 (342)
T ss_dssp --ECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEE-SCSSSSS-SCCCEEEEEECSSE--EEEE
T ss_pred --eccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccC-CeeeEEe-eCCceEEEEecCCc--EEEE
Confidence 4455 777899999999 644 8999999999999987 5 5566666 88999999999886 9999
Q ss_pred eCCCcEEEEeCCC-CeEE-E--EEeCCCeeEEE--Ec-CCCEEEEEc-CCcEEEEEcCCC------cee-eeeCCCC---
Q 021744 169 SKDETVRVWDCAS-GQCA-G--VINLGGEVGCM--IS-EGPWIFIGV-TNFVKAWNTQTN------TDL-SLSGPVG--- 230 (308)
Q Consensus 169 s~dg~v~~wd~~~-~~~~-~--~~~~~~~v~~~--~~-~~~~l~~~~-d~~i~~wd~~~~------~~~-~~~~~~~--- 230 (308)
+.|+.|++||+++ ++.. . ...+...+.++ .+ +++++++++ ++.|++||++.. +.. .+..|..
T Consensus 167 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (342)
T 1yfq_A 167 MNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLK 246 (342)
T ss_dssp ESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTT
T ss_pred eCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeeccccccc
Confidence 9999999999998 5432 2 22256667766 46 788888776 999999999876 444 6677755
Q ss_pred ------CEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceecccc-CCCeEE-EEecCCCeEEEee
Q 021744 231 ------QVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVH-TDSNRA-HFSRDVTSLLGSV 291 (308)
Q Consensus 231 ------~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~v~~-~~s~d~~~l~~s~ 291 (308)
.|.+++|+|+ +|++++.||.|++||+.++ +++..+..| ...|.+ + |++++|++++
T Consensus 247 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~----~~~~~~~~~h~~~v~~~~--~~~~~l~s~s 311 (342)
T 1yfq_A 247 DTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR----KKIKNFAKFNEDSVVKIA--CSDNILCLAT 311 (342)
T ss_dssp CCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTT----EEEEECCCCSSSEEEEEE--ECSSEEEEEE
T ss_pred ccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccH----hHhhhhhcccCCCceEec--CCCCeEEEEe
Confidence 9999999998 8999999999999999987 778889888 999988 7 9999988655
No 76
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.6e-31 Score=229.93 Aligned_cols=228 Identities=10% Similarity=-0.045 Sum_probs=169.8
Q ss_pred CceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-e--eccCCCcEEEEECCCCCCcc
Q 021744 27 GLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-R--NNNFNNHSNNYRAGNSKNSN 101 (308)
Q Consensus 27 ~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~--s~~~d~~i~vwd~~~~~~~~ 101 (308)
..|++++.|+++|+|+....+.... ..... .......+... .++|+|||++ + +++.|++|+|||+++++...
T Consensus 95 ~~l~s~~~d~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~ 171 (365)
T 4h5i_A 95 TKITQGKGNKHLRKFKYDKVNDQLE-FLTSV--DFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF 171 (365)
T ss_dssp HHHHHTSCCCCEEEEEEETTTTEEE-EEEEE--CSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE
T ss_pred cEEEEecCCCcEEEEEecCCCceEE-Eeeee--ceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE
Confidence 3455667789999999765421100 00000 01111222222 7999999998 4 56689999999998887653
Q ss_pred cccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceee-eEeeCcccceEEEEEeCCCCEEEEeeCCC----cEEE
Q 021744 102 INNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLL-TQLEGHQKVVSGITLPSGSDKLYSGSKDE----TVRV 176 (308)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l~s~s~dg----~v~~ 176 (308)
. ..|...+..+.|+|++..+..+.++.+++|+..++.... ....+|...|.+++|+|+++++++++.|+ .+++
T Consensus 172 ~--~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~ 249 (365)
T 4h5i_A 172 E--IETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTK 249 (365)
T ss_dssp E--EECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEE
T ss_pred E--eCCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEee
Confidence 2 346667999999999988544456667777777663332 34567899999999999999999999887 6889
Q ss_pred EeCCCCeEE----EEEe-CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCcee-e-eeCCCCCEEEEEEeCC--EEEE
Q 021744 177 WDCASGQCA----GVIN-LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDL-S-LSGPVGQVYAMAVGND--LLFA 244 (308)
Q Consensus 177 wd~~~~~~~----~~~~-~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~-~-~~~~~~~v~~~~~~~~--~l~~ 244 (308)
|++...... ..+. +...+.++ +|++++|++|+ |++|++||+++++++ . +.+|...|++++|+|| +|++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS 329 (365)
T 4h5i_A 250 ISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVAS 329 (365)
T ss_dssp EEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEE
T ss_pred cccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEE
Confidence 998876542 2233 66777766 58999999877 999999999999887 4 4789999999999999 9999
Q ss_pred EcCCCeEEEEEcCCC
Q 021744 245 GTQDGAILAWKFNVT 259 (308)
Q Consensus 245 g~~dg~i~iwd~~~~ 259 (308)
|+.|++|+|||++..
T Consensus 330 ~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 330 VSAANTIHIIKLPLN 344 (365)
T ss_dssp EETTSEEEEEECCTT
T ss_pred EeCCCeEEEEEcCCC
Confidence 999999999999754
No 77
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.8e-30 Score=220.31 Aligned_cols=245 Identities=11% Similarity=0.079 Sum_probs=193.9
Q ss_pred Cccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCc---ccccceeeeeeeeeeeec--CCce-EEeeCCCeEEE
Q 021744 63 AATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNS---NINNRAVIKTDILCRNWV--QGNC-MYGEKCKFLHS 133 (308)
Q Consensus 63 ~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~-~~g~~d~~i~i 133 (308)
.+.+|... +++|+|++.+ ++++.|++|++||+.++... ......|...+.++.|++ ++.. ++++.|+.|++
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 34688877 8999999999 99999999999999765432 223345777799999998 4655 89999999999
Q ss_pred EEcCCCc--------eeeeEeeCcccceEEEEEeCC--CCEEEEeeCCCcEEEEeCCCCeEEEEEe--------------
Q 021744 134 WTVGDGF--------KLLTQLEGHQKVVSGITLPSG--SDKLYSGSKDETVRVWDCASGQCAGVIN-------------- 189 (308)
Q Consensus 134 wd~~~~~--------~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~dg~v~~wd~~~~~~~~~~~-------------- 189 (308)
||+.++. +.+..+.+|...|.+++|+|+ +.++++++.|+.|++||+++++.+..+.
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPAN 165 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSS
T ss_pred EecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCC
Confidence 9998763 447778899999999999999 9999999999999999999876543332
Q ss_pred CCCeeEEE--EcC---CCEEEEEc-CCcEEEEEcCCCcee---eeeCCCCCEEEEEEeCC------EEEEEcCCCeEEEE
Q 021744 190 LGGEVGCM--ISE---GPWIFIGV-TNFVKAWNTQTNTDL---SLSGPVGQVYAMAVGND------LLFAGTQDGAILAW 254 (308)
Q Consensus 190 ~~~~v~~~--~~~---~~~l~~~~-d~~i~~wd~~~~~~~---~~~~~~~~v~~~~~~~~------~l~~g~~dg~i~iw 254 (308)
+...+.++ .++ +.+++++. ++.+.+|+...++.. .+.+|...|++++|+|+ +|++++.||.|++|
T Consensus 166 ~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iw 245 (351)
T 3f3f_A 166 HLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIF 245 (351)
T ss_dssp CSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEE
T ss_pred cccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEE
Confidence 23344554 343 77888766 888888888777642 67789999999999998 69999999999999
Q ss_pred EcCCCCc------------------------------------------ccccceeccccCCCeEE-EEecCCCeEEEee
Q 021744 255 KFNVTTN------------------------------------------CFEPAASLKVHTDSNRA-HFSRDVTSLLGSV 291 (308)
Q Consensus 255 d~~~~~~------------------------------------------~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~ 291 (308)
|++.+.. ..+++..+.+|...|++ +|+|++++|++++
T Consensus 246 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 325 (351)
T 3f3f_A 246 KITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAG 325 (351)
T ss_dssp EEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEE
T ss_pred eCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEec
Confidence 9986411 01456667789999999 9999999998766
Q ss_pred ---ceEEEEeecCceeEEe
Q 021744 292 ---SFIMFIGQNNKGVVCY 307 (308)
Q Consensus 292 ---s~~i~~~~~~~~~~~~ 307 (308)
.+.+|-....+.+.|+
T Consensus 326 ~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 326 DDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp TTSCEEEEEECTTSCEEEE
T ss_pred CCCcEEEEecCcCcchhhe
Confidence 4666666676777664
No 78
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.98 E-value=1.3e-30 Score=222.55 Aligned_cols=231 Identities=13% Similarity=0.145 Sum_probs=187.4
Q ss_pred cccccc--eeEEecCCCe--eeccC---CCcEEEEECCCCCCcccccceeeeeeeeeeeecC---Cc-eEEeeCCCeEEE
Q 021744 65 TANGAA--AKRFANNTWG--RNNNF---NNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQ---GN-CMYGEKCKFLHS 133 (308)
Q Consensus 65 ~gh~~~--~i~~s~~g~~--~s~~~---d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~g~~d~~i~i 133 (308)
.+|... +++|+|++.. ++++. |++|++||+.+++........|...+.++.|+++ +. +++++.|+.|++
T Consensus 15 ~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i 94 (357)
T 3i2n_A 15 KGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHI 94 (357)
T ss_dssp EECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEE
T ss_pred cCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEE
Confidence 467777 8999999976 67776 9999999998876654444567778999999998 44 489999999999
Q ss_pred EEcCCCceeeeEeeCcccceEEEEE------eCCCCEEEEeeCCCcEEEEeCCCCe-EEEEEe-CC----CeeEEEE---
Q 021744 134 WTVGDGFKLLTQLEGHQKVVSGITL------PSGSDKLYSGSKDETVRVWDCASGQ-CAGVIN-LG----GEVGCMI--- 198 (308)
Q Consensus 134 wd~~~~~~~~~~~~~h~~~v~~~~~------~~~~~~l~s~s~dg~v~~wd~~~~~-~~~~~~-~~----~~v~~~~--- 198 (308)
||+.++...+..+.+|...|.+++| +|++++|++++.|+.|++||+++++ .+..+. +. ..+.++.
T Consensus 95 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 174 (357)
T 3i2n_A 95 WNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGN 174 (357)
T ss_dssp ECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEEC
T ss_pred EeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEe
Confidence 9999883378899999999999954 6789999999999999999999887 677775 22 2566553
Q ss_pred ---cCCCEEEEEc-CCcEEEEEcCCCceeeeeCCCCCEEEEEEeC---C--EEEEEcCCCeEEEEEcCCCCcccccceec
Q 021744 199 ---SEGPWIFIGV-TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGN---D--LLFAGTQDGAILAWKFNVTTNCFEPAASL 269 (308)
Q Consensus 199 ---~~~~~l~~~~-d~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~---~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~ 269 (308)
++++++++++ |+.|++||+++++......|...|.+++|+| + +|++++.||.|++||++++ +++..+
T Consensus 175 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~----~~~~~~ 250 (357)
T 3i2n_A 175 AYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQ----HPTKGF 250 (357)
T ss_dssp CCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEE----ETTTEE
T ss_pred ccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCC----Ccccce
Confidence 7889999877 8999999999999887788899999999998 6 9999999999999999986 444444
Q ss_pred c-----ccCCCeEE-EEecCCC-eEEEee-ceEEEEee
Q 021744 270 K-----VHTDSNRA-HFSRDVT-SLLGSV-SFIMFIGQ 299 (308)
Q Consensus 270 ~-----~~~~~v~~-~~s~d~~-~l~~s~-s~~i~~~~ 299 (308)
. .|...+.+ +|+|+++ ++++++ +..|.++.
T Consensus 251 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd 288 (357)
T 3i2n_A 251 ASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWK 288 (357)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEE
T ss_pred eeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEee
Confidence 3 89999999 9999998 566554 44444443
No 79
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.98 E-value=9e-32 Score=264.84 Aligned_cols=255 Identities=15% Similarity=0.142 Sum_probs=217.6
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcc
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSN 101 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~ 101 (308)
.+.++++++.|+.|++|+...+ . ......+|... +++|+|++++ ++++.|++|++||+.+++..
T Consensus 972 ~g~~l~~g~~~g~i~i~d~~~~-----------~-~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~- 1038 (1249)
T 3sfz_A 972 HLEYVAFGDEDGAIKIIELPNN-----------R-VFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYV- 1038 (1249)
T ss_dssp TSSEEEEEETTSCCEEEETTTT-----------S-CEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEE-
T ss_pred CCCEEEEEcCCCCEEEEEcCCC-----------c-eeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceE-
Confidence 4678999999999999998876 1 12223466666 8999999999 99999999999999887655
Q ss_pred cccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCC
Q 021744 102 INNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCAS 181 (308)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~ 181 (308)
....|...+..+.+++++..++++.|+.|++||+.++ +....+.+|...|.+++|+|+++++++++.|++|++||+.+
T Consensus 1039 -~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~-~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~ 1116 (1249)
T 3sfz_A 1039 -FLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITG-RIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDL 1116 (1249)
T ss_dssp -CCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTT-CCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSS
T ss_pred -EEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCC-ceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence 4456777799999999988899999999999999999 78889999999999999999999999999999999999999
Q ss_pred CeEEEEEe-CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCcee-ee---------eCCCCCEEEEEEeCC--EEEEE
Q 021744 182 GQCAGVIN-LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDL-SL---------SGPVGQVYAMAVGND--LLFAG 245 (308)
Q Consensus 182 ~~~~~~~~-~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~---------~~~~~~v~~~~~~~~--~l~~g 245 (308)
++++..+. |...+.++ ++++++|++++ |+.|++||+.+++.. .+ ..|...|++++|+|+ +++++
T Consensus 1117 ~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~ 1196 (1249)
T 3sfz_A 1117 LSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSA 1196 (1249)
T ss_dssp SSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEE
T ss_pred cceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEEC
Confidence 98888777 67777766 57899999877 999999999988765 33 578899999999999 77777
Q ss_pred cCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee-ceEEEEeec
Q 021744 246 TQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV-SFIMFIGQN 300 (308)
Q Consensus 246 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~~~ 300 (308)
+ |.|++||+.++ +.+..+..|...+.+ +|+||+++|+++. +..++++.-
T Consensus 1197 ~--g~v~vwd~~~g----~~~~~~~~~~~~i~~~~~s~dg~~l~~~~~dg~v~vw~l 1247 (1249)
T 3sfz_A 1197 G--GYLKWWNVATG----DSSQTFYTNGTNLKKIHVSPDFRTYVTVDNLGILYILQV 1247 (1249)
T ss_dssp S--SSEEEBCSSSC----BCCCCCCCSSCCCCCCEECSSSCCEEEECTTCCEEEECC
T ss_pred C--CeEEEEECCCC----ceeeeeeccCCcccEEEECCCCCEEEEecCCcEEEEEee
Confidence 5 89999999987 778888889999999 9999999988655 667776653
No 80
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.98 E-value=3e-30 Score=226.14 Aligned_cols=236 Identities=16% Similarity=0.250 Sum_probs=185.8
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCe-eeccCCCcEEEEECCCCCCcccc
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNIN 103 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~ 103 (308)
.+.+||+|+.|++|++||..++ . ......+|.....++++++.. ++|+.|+++++||..........
T Consensus 158 dg~~lasgs~Dg~v~iWd~~~~-----------~-~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~ 225 (420)
T 4gga_A 158 EGNYLAVGTSSAEVQLWDVQQQ-----------K-RLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVAT 225 (420)
T ss_dssp TSSEEEEEETTSCEEEEETTTT-----------E-EEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred CCCEEEEEECCCeEEEEEcCCC-----------c-EEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEE
Confidence 4689999999999999999876 1 122345676665567778888 99999999999999776555445
Q ss_pred cceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCc---eeeeEeeCcccceEEEEEeCCCC-EEEE--eeCCCcEEE
Q 021744 104 NRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGF---KLLTQLEGHQKVVSGITLPSGSD-KLYS--GSKDETVRV 176 (308)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~---~~~~~~~~h~~~v~~~~~~~~~~-~l~s--~s~dg~v~~ 176 (308)
...|...+..+.+.+++.. ++++.|+.+++|+..++. ..+.....|...|.+++|+|.+. .+++ |+.|++|++
T Consensus 226 ~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~i 305 (420)
T 4gga_A 226 LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRI 305 (420)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEE
T ss_pred ecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEE
Confidence 5677777899999999976 889999999999998763 24566778999999999999764 4444 568999999
Q ss_pred EeCCCCeEEEEEeCCCeeEEE--EcCCCEEEEE--c-CCcEEEEEcCCCcee-eeeCCCCCEEEEEEeCC--EEEEEcCC
Q 021744 177 WDCASGQCAGVINLGGEVGCM--ISEGPWIFIG--V-TNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQD 248 (308)
Q Consensus 177 wd~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~--~-d~~i~~wd~~~~~~~-~~~~~~~~v~~~~~~~~--~l~~g~~d 248 (308)
||+++++++..+.....+.++ .++++.++++ . |+.|++||+.+++++ .+.+|.+.|++++|+|+ +|++|+.|
T Consensus 306 wd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D 385 (420)
T 4gga_A 306 WNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAAD 385 (420)
T ss_dssp EETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred EeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC
Confidence 999999999999866666554 5777777753 2 899999999999888 88999999999999999 99999999
Q ss_pred CeEEEEEcCCCCcccccceeccccCCCe
Q 021744 249 GAILAWKFNVTTNCFEPAASLKVHTDSN 276 (308)
Q Consensus 249 g~i~iwd~~~~~~~~~~~~~~~~~~~~v 276 (308)
++|+|||+... .+....+.+....
T Consensus 386 ~tvriWdv~~~----~~~~~~~~~~~~~ 409 (420)
T 4gga_A 386 ETLRLWRCFEL----DPARRREREKASA 409 (420)
T ss_dssp TEEEEECCSCS----SCC----------
T ss_pred CeEEEEECCCC----CccchhhhccCCc
Confidence 99999999875 4444444444333
No 81
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.98 E-value=1e-29 Score=220.82 Aligned_cols=268 Identities=13% Similarity=0.155 Sum_probs=196.9
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccc-cCCCCCCccccccc--eeEEec-CCCe-eeccCCCcEEEEECCCCCC
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHR-ELPLPPAATANGAA--AKRFAN-NTWG-RNNNFNNHSNNYRAGNSKN 99 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~-~~~~~~~~~gh~~~--~i~~s~-~g~~-~s~~~d~~i~vwd~~~~~~ 99 (308)
.+.+||+++.|++|++|+.............. .........+|... +++|+| ++.+ ++++.|++|++||+.+++.
T Consensus 55 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 134 (408)
T 4a11_B 55 EGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQT 134 (408)
T ss_dssp TCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCcc
Confidence 46789999999999999988762211100000 00011122356666 899999 6667 9999999999999987765
Q ss_pred cccccceeeeeeeeeeeecCC---ce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCC-EEEEeeCCCcE
Q 021744 100 SNINNRAVIKTDILCRNWVQG---NC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSD-KLYSGSKDETV 174 (308)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~---~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~dg~v 174 (308)
. ....+...+..+.+.+.+ .. ++++.|+.|++||+.++ +.+..+.+|...|.+++|+|++. ++++++.||.|
T Consensus 135 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i 211 (408)
T 4a11_B 135 A--DVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG-SCSHILQGHRQEILAVSWSPRYDYILATASADSRV 211 (408)
T ss_dssp E--EEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS-CCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCE
T ss_pred c--eeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc-ceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcE
Confidence 4 222344456777777754 24 88999999999999988 78889999999999999999998 58999999999
Q ss_pred EEEeCCCCe-EEEEE----------------eCCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCcee-eeeCC-----
Q 021744 175 RVWDCASGQ-CAGVI----------------NLGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDL-SLSGP----- 228 (308)
Q Consensus 175 ~~wd~~~~~-~~~~~----------------~~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~----- 228 (308)
++||+++++ ++..+ .+...+.++ .+++++|++++ |+.|++||+++++.. ....+
T Consensus 212 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 291 (408)
T 4a11_B 212 KLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNS 291 (408)
T ss_dssp EEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCC
T ss_pred EEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccc
Confidence 999998765 34433 245566665 47888888776 999999999988765 22211
Q ss_pred -CCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 229 -VGQVYAMAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 229 -~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
..........+. .+++++.++.|++||+.++ +++..+.+|...|.+ +|+|++++|++++ +..|.++.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~----~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~ 362 (408)
T 4a11_B 292 KKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSG----EQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWV 362 (408)
T ss_dssp SSCCCCEECCSSSSCEEEEEETTEEEEEETTTC----CEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred cccceeEEecCCCceEEEEecCCEEEEEECcCC----cceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEe
Confidence 111222222333 7777788999999999987 778889999999999 9999999998666 44444443
No 82
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.5e-30 Score=219.20 Aligned_cols=239 Identities=13% Similarity=0.051 Sum_probs=187.9
Q ss_pred CCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCC-cccccceeeeeeeeeeeecC--Cce-EEeeCCCeEEEE
Q 021744 62 PAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKN-SNINNRAVIKTDILCRNWVQ--GNC-MYGEKCKFLHSW 134 (308)
Q Consensus 62 ~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~-~~g~~d~~i~iw 134 (308)
..+.+|... +++|+|++.+ ++|+.|++|+|||+..... .......|...+.++.|+++ +.. ++++.|+.|++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw 84 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 84 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEE
Confidence 345688888 8999999999 9999999999999964321 11234567777999999876 655 899999999999
Q ss_pred EcCCCc-eeeeEeeCcccceEEEEEeCC--CCEEEEeeCCCcEEEEeCCCCeEE--EEE-eCCCeeEEE--Ec-------
Q 021744 135 TVGDGF-KLLTQLEGHQKVVSGITLPSG--SDKLYSGSKDETVRVWDCASGQCA--GVI-NLGGEVGCM--IS------- 199 (308)
Q Consensus 135 d~~~~~-~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~dg~v~~wd~~~~~~~--~~~-~~~~~v~~~--~~------- 199 (308)
|+.++. ..+..+.+|...|.+++|+|+ +.+|++++.|+.|++||+++.... ..+ .+...+.++ .+
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 164 (379)
T 3jrp_A 85 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 164 (379)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-----
T ss_pred EcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccc
Confidence 999882 267788889999999999999 899999999999999999987432 233 367777776 34
Q ss_pred ------CCCEEEEEc-CCcEEEEEcCCCce----e-eeeCCCCCEEEEEEeCC-----EEEEEcCCCeEEEEEcCCCCcc
Q 021744 200 ------EGPWIFIGV-TNFVKAWNTQTNTD----L-SLSGPVGQVYAMAVGND-----LLFAGTQDGAILAWKFNVTTNC 262 (308)
Q Consensus 200 ------~~~~l~~~~-d~~i~~wd~~~~~~----~-~~~~~~~~v~~~~~~~~-----~l~~g~~dg~i~iwd~~~~~~~ 262 (308)
++.++++++ |+.|++||+++++. . .+.+|...|.+++|+|+ +|++++.||.|++||++++...
T Consensus 165 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 244 (379)
T 3jrp_A 165 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGP 244 (379)
T ss_dssp -----CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC
T ss_pred cccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCcc
Confidence 478888776 99999999987642 2 57789999999999985 8999999999999999986320
Q ss_pred -cccceeccccCCCeEE-EEecCCCeEEEee---ceEEEEeec
Q 021744 263 -FEPAASLKVHTDSNRA-HFSRDVTSLLGSV---SFIMFIGQN 300 (308)
Q Consensus 263 -~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~---s~~i~~~~~ 300 (308)
...+.....|...+.+ +|+|++++|++++ .+.+|-...
T Consensus 245 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 245 WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp CEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred ceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 0122333458889999 9999999998655 455555443
No 83
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=1.2e-30 Score=226.78 Aligned_cols=221 Identities=11% Similarity=-0.009 Sum_probs=157.8
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCCCc----ccccceeeeeeeeeeeec--------CCce-EEeeCCCeEEEEEc
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSKNS----NINNRAVIKTDILCRNWV--------QGNC-MYGEKCKFLHSWTV 136 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~----~~~~~~~~~~~~~~~~~~--------~~~~-~~g~~d~~i~iwd~ 136 (308)
...+++++.. ++++.|++|||||+.+++.. .....+|...|..+.|+| ++.. ++++.|++|+|||+
T Consensus 94 ~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~ 173 (393)
T 4gq1_A 94 VNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRL 173 (393)
T ss_dssp ---CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEE
T ss_pred eeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEEC
Confidence 3455667777 99999999999999876532 234567888999999987 5555 89999999999999
Q ss_pred CCCceeeeEeeCcccceEEEEEeCCC-CEEEEeeCCCcEEEEeCCCCeEEEEEe--------------------------
Q 021744 137 GDGFKLLTQLEGHQKVVSGITLPSGS-DKLYSGSKDETVRVWDCASGQCAGVIN-------------------------- 189 (308)
Q Consensus 137 ~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~~~~~~~~-------------------------- 189 (308)
.++ ..+..+.+|...|.+++|+|++ .+|++++.|++|++||+++++......
T Consensus 174 ~~~-~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 252 (393)
T 4gq1_A 174 TDE-GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSG 252 (393)
T ss_dssp ETT-EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------C
T ss_pred CCC-ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccc
Confidence 888 6677777899999999999987 479999999999999999876554332
Q ss_pred CCCeeEEE--E-cCCCEEEEEc-CCcEEEEEcCCCcee-eeeCCCCCEEEE------------------EEeC--C--EE
Q 021744 190 LGGEVGCM--I-SEGPWIFIGV-TNFVKAWNTQTNTDL-SLSGPVGQVYAM------------------AVGN--D--LL 242 (308)
Q Consensus 190 ~~~~v~~~--~-~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~~~~v~~~------------------~~~~--~--~l 242 (308)
+...+.++ + ++++.+++++ |+++++||+.+++.. .+..|...+..+ .++| + ++
T Consensus 253 ~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
T 4gq1_A 253 IASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFA 332 (393)
T ss_dssp CSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEE
T ss_pred ccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEE
Confidence 12223333 2 6788998877 999999999877644 343443333332 3333 2 67
Q ss_pred EEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEeeceEEE
Q 021744 243 FAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSVSFIMF 296 (308)
Q Consensus 243 ~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~s~~i~ 296 (308)
++|+.||.|++||+.++ +.+..+..|..+|++ +|+|||++|+++....+.
T Consensus 333 ~sgs~Dg~V~lwd~~~~----~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~ 383 (393)
T 4gq1_A 333 TAHSQHGLIQLINTYEK----DSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVL 383 (393)
T ss_dssp EEETTTTEEEEEETTCT----TCCEEEEECSSCEEEEEECTTSSEEEEEESSEEE
T ss_pred EEECCCCEEEEEECCCC----cEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 88999999999999987 666777788899999 999999999977644443
No 84
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=6e-30 Score=219.85 Aligned_cols=225 Identities=10% Similarity=0.025 Sum_probs=186.1
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCCC-cccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceee--eE
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSKN-SNINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLL--TQ 145 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~--~~ 145 (308)
+++|+|++++ ++++.|++|++||+.+++. .......|...+..+.|++++.. ++++.|+.|++||+.++ +.. ..
T Consensus 13 ~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~ 91 (372)
T 1k8k_C 13 CHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR-TWKPTLV 91 (372)
T ss_dssp EEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT-EEEEEEE
T ss_pred EEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCC-eeeeeEE
Confidence 7999999999 9999999999999987641 11234457777999999999976 88999999999999887 433 33
Q ss_pred eeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeE---EEEEe--CCCeeEEE--EcCCCEEEEEc-CCcEEEEEc
Q 021744 146 LEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQC---AGVIN--LGGEVGCM--ISEGPWIFIGV-TNFVKAWNT 217 (308)
Q Consensus 146 ~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~---~~~~~--~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~ 217 (308)
+..|...|.+++|+|++++|++++.|+.|++||++.++. ...+. +...+.++ .++++++++++ |+.|++||+
T Consensus 92 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~ 171 (372)
T 1k8k_C 92 ILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSA 171 (372)
T ss_dssp CCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred eecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEc
Confidence 467999999999999999999999999999999998763 33333 56677776 47888888776 999999996
Q ss_pred C------------------CCcee-eeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCe
Q 021744 218 Q------------------TNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSN 276 (308)
Q Consensus 218 ~------------------~~~~~-~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v 276 (308)
+ +++.. .+..|...|.+++|+|+ +|++++.|+.|++||++++ +++..+..|...+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~v 247 (372)
T 1k8k_C 172 YIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKK----MAVATLASETLPL 247 (372)
T ss_dssp CCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGT----TEEEEEECSSCCE
T ss_pred ccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCC----ceeEEEccCCCCe
Confidence 4 45555 67789999999999999 9999999999999999987 7788888999999
Q ss_pred EE-EEecCCCeEEEeec--eEEEEeec
Q 021744 277 RA-HFSRDVTSLLGSVS--FIMFIGQN 300 (308)
Q Consensus 277 ~~-~~s~d~~~l~~s~s--~~i~~~~~ 300 (308)
.+ +|+|++.+++++.+ +.+|....
T Consensus 248 ~~~~~~~~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 248 LAVTFITESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp EEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred EEEEEecCCCEEEEEeCCeEEEEEccC
Confidence 99 99999998887664 45555444
No 85
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.2e-30 Score=217.80 Aligned_cols=243 Identities=11% Similarity=0.068 Sum_probs=174.9
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCeeeccCCCcEEEEECC---------
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWGRNNNFNNHSNNYRAG--------- 95 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~~s~~~d~~i~vwd~~--------- 95 (308)
.+.++++|+.|++|++||..++.. ... +......++.++|+ .++++.|++|++|+..
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~-----------~~~-~~~~~v~~~~~~~~--~~s~s~D~~i~~w~~~~~~~~~~~~ 112 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKT-----------ITT-ITTPNPRTGGEHPA--IISRGPCNRLLLLYPGNQITILDSK 112 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSC-----------EEE-EEEECCCTTCCCCS--EEEECSTTEEEEEETTTEEEEEETT
T ss_pred CCCEEEEECCCCcEEEEECCCCcE-----------EEE-EecCCceeeeeCCc--eEEecCCCeEEEEEccCceEEeecC
Confidence 357899999999999999987611 000 00000014677777 8999999999999775
Q ss_pred CCCCcccccceeeeeeeeeeeec--CCce-EEeeCCCeEEEEEcCCCceeeeEee-CcccceEEEEEeCCCCEEEEeeCC
Q 021744 96 NSKNSNINNRAVIKTDILCRNWV--QGNC-MYGEKCKFLHSWTVGDGFKLLTQLE-GHQKVVSGITLPSGSDKLYSGSKD 171 (308)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~d 171 (308)
+++.+......|...+..+.++| ++.. ++++.|+.|++||++++ +....+. .|...|.+++|+|++.+|++|+.|
T Consensus 113 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~-~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d 191 (343)
T 3lrv_A 113 TNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDD-SQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD 191 (343)
T ss_dssp TCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSS-CEEEEECCCSSCCCCEEEECTTSCEEEEECTT
T ss_pred CcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCC-cEEEEEecCCCCceEEEEECCCCCEEEEEcCC
Confidence 22222222233446689999999 8876 88999999999999988 5555553 456689999999999999999999
Q ss_pred CcEEEEeCCCCeEE-EEEe--CCCeeEEE--EcCCCEEEEEcCCcEEEEEcCCCcee-eeeC---CCCCE--EEEEEeCC
Q 021744 172 ETVRVWDCASGQCA-GVIN--LGGEVGCM--ISEGPWIFIGVTNFVKAWNTQTNTDL-SLSG---PVGQV--YAMAVGND 240 (308)
Q Consensus 172 g~v~~wd~~~~~~~-~~~~--~~~~v~~~--~~~~~~l~~~~d~~i~~wd~~~~~~~-~~~~---~~~~v--~~~~~~~~ 240 (308)
+.|++||+++++.+ ..+. |..++.++ .+++.+|++++++.|++||+++.+.. .+.. |...+ .+++|+|+
T Consensus 192 g~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (343)
T 3lrv_A 192 GILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDS 271 (343)
T ss_dssp SCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTT
T ss_pred CEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeecccccccccccceEEEECCC
Confidence 99999999998877 6665 57888876 47899999888779999999988764 3332 33344 36999999
Q ss_pred --EEEEEcC-CCeEEEEEcCCCCcccccceeccccCCCeEE-EEec---CCCeEEEe
Q 021744 241 --LLFAGTQ-DGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSR---DVTSLLGS 290 (308)
Q Consensus 241 --~l~~g~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~---d~~~l~~s 290 (308)
+|++++. |+.|++|++......++. .++.. .|++ +.+.++++
T Consensus 272 g~~l~~~s~~d~~i~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~ 320 (343)
T 3lrv_A 272 GKNMIAYSNESNSLTIYKFDKKTKNWTK--------DEESALCLQSDTADFTDMDVV 320 (343)
T ss_dssp SSEEEEEETTTTEEEEEEECTTTCSEEE--------EEEEECCC----CCCCEEEEE
T ss_pred CCEEEEecCCCCcEEEEEEcccccceEe--------cCceeEecCccccccceeEEE
Confidence 8888888 999999999765321111 34555 6666 66666543
No 86
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=7e-30 Score=224.95 Aligned_cols=228 Identities=8% Similarity=0.138 Sum_probs=176.5
Q ss_pred ccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCC----------cccccceee------------eeeeeeeeecCC
Q 021744 66 ANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKN----------SNINNRAVI------------KTDILCRNWVQG 120 (308)
Q Consensus 66 gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~----------~~~~~~~~~------------~~~~~~~~~~~~ 120 (308)
.+.+. +++|+|+|.+ |+|+.|++|+|||+.+++. .......|. ..+..+.|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 34444 8999999999 9999999999999987652 122334565 668999999997
Q ss_pred --c-eEEeeCCCeEEEEEcCCCceee---------------------------------------eE-eeCcccceEEEE
Q 021744 121 --N-CMYGEKCKFLHSWTVGDGFKLL---------------------------------------TQ-LEGHQKVVSGIT 157 (308)
Q Consensus 121 --~-~~~g~~d~~i~iwd~~~~~~~~---------------------------------------~~-~~~h~~~v~~~~ 157 (308)
. +++++.|+.|++||+.++ +.. .. +.+|...|.+++
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISER-DKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEE-EEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CcceEEEeCCCCeEEEEecccc-cCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 3 489999999999999764 221 12 367999999999
Q ss_pred EeCCCCEEEEeeCCCcEEEEeCCC-CeEEEEE--------eCCCeeEEE--EcCC-CEEEEEc-CCcEEEEEcCCCce--
Q 021744 158 LPSGSDKLYSGSKDETVRVWDCAS-GQCAGVI--------NLGGEVGCM--ISEG-PWIFIGV-TNFVKAWNTQTNTD-- 222 (308)
Q Consensus 158 ~~~~~~~l~s~s~dg~v~~wd~~~-~~~~~~~--------~~~~~v~~~--~~~~-~~l~~~~-d~~i~~wd~~~~~~-- 222 (308)
|+|++++|+++ .|++|++||+++ ++.+..+ .+...+.++ .+++ ++|++++ |+.|++||+++++.
T Consensus 185 ~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 185 INSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp ECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred EcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 99999999998 799999999994 5555544 266667776 4666 7888776 99999999999875
Q ss_pred ---eeeeCCCC------------CEEEEEEeCC--EEEEEcCCCeEEEEEcCC-CCcccccceeccccCCCeE-------
Q 021744 223 ---LSLSGPVG------------QVYAMAVGND--LLFAGTQDGAILAWKFNV-TTNCFEPAASLKVHTDSNR------- 277 (308)
Q Consensus 223 ---~~~~~~~~------------~v~~~~~~~~--~l~~g~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~v~------- 277 (308)
..+..|.. .|.+++|+|+ +|++++. +.|++||++. + +++..+..|...+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~----~~~~~~~~~~~~~~~l~~~~~ 338 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMEN----RPVETYQVHEYLRSKLCSLYE 338 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCS----SCSCCEESCGGGTTTHHHHHH
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCc----cccceeecccccccccccccc
Confidence 36777775 8999999999 8888888 9999999987 4 66777777764332
Q ss_pred ---------EEEecCCCeEEEee-ceEEEEeec
Q 021744 278 ---------AHFSRDVTSLLGSV-SFIMFIGQN 300 (308)
Q Consensus 278 ---------~~~s~d~~~l~~s~-s~~i~~~~~ 300 (308)
.+|+|++++|++++ +..|+++..
T Consensus 339 ~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~ 371 (447)
T 3dw8_B 339 NDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDR 371 (447)
T ss_dssp TSGGGCCCCEEECTTSSEEEEECSTTEEEEEET
T ss_pred ccccccceEEEECCCCCEEEEeccCCEEEEEEc
Confidence 59999999998655 666666553
No 87
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=5.9e-30 Score=217.15 Aligned_cols=235 Identities=11% Similarity=0.096 Sum_probs=181.0
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEec--CCCe-eeccCCCcEEEEECCCCCCc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFAN--NTWG-RNNNFNNHSNNYRAGNSKNS 100 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~--~g~~-~s~~~d~~i~vwd~~~~~~~ 100 (308)
+.+||+++.|++|++|+....... ......+.+|... +++|+| ++.+ ++++.|++|++||+.+++..
T Consensus 23 ~~~l~~~~~dg~i~iw~~~~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~ 94 (351)
T 3f3f_A 23 GRHVATCSSDQHIKVFKLDKDTSN--------WELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEE 94 (351)
T ss_dssp SSEEEEEETTSEEEEEEECSSSCC--------EEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCT
T ss_pred CCEEEEeeCCCeEEEEECCCCCCc--------ceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCccc
Confidence 568999999999999998865110 0111233467666 899999 5888 99999999999999876422
Q ss_pred --------ccccceeeeeeeeeeeecC--Cce-EEeeCCCeEEEEEcCCCceeeeEee-------------CcccceEEE
Q 021744 101 --------NINNRAVIKTDILCRNWVQ--GNC-MYGEKCKFLHSWTVGDGFKLLTQLE-------------GHQKVVSGI 156 (308)
Q Consensus 101 --------~~~~~~~~~~~~~~~~~~~--~~~-~~g~~d~~i~iwd~~~~~~~~~~~~-------------~h~~~v~~~ 156 (308)
......|...+..+.|+|+ +.. ++++.|+.|++||+.++ +.+..+. +|...+.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (351)
T 3f3f_A 95 CSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEP-SDLRSWTLTSEMKVLSIPPANHLQSDFCL 173 (351)
T ss_dssp TSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSST-TCTTCCEEEEEEESCSCCCSSCSCCCEEE
T ss_pred ccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCCh-HHhccccccccccccccccCCcccceeEE
Confidence 1223456667999999998 765 88999999999999877 3333322 688899999
Q ss_pred EEeCC---CCEEEEeeCCCcEEEEeCCCCeE--EEEEe-CCCeeEEE--EcCC----CEEEEEc-CCcEEEEEcCCC---
Q 021744 157 TLPSG---SDKLYSGSKDETVRVWDCASGQC--AGVIN-LGGEVGCM--ISEG----PWIFIGV-TNFVKAWNTQTN--- 220 (308)
Q Consensus 157 ~~~~~---~~~l~s~s~dg~v~~wd~~~~~~--~~~~~-~~~~v~~~--~~~~----~~l~~~~-d~~i~~wd~~~~--- 220 (308)
+|+|+ +.++++++.|+.+.+|+...++. +..+. +...+.++ .+++ ++|++++ |+.|++||++++
T Consensus 174 ~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 253 (351)
T 3f3f_A 174 SWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSP 253 (351)
T ss_dssp EECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--
T ss_pred EeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCc
Confidence 99997 89999999999999998887765 44444 67778776 3565 6788776 999999999874
Q ss_pred -------------------------------------------cee-eeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEE
Q 021744 221 -------------------------------------------TDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAW 254 (308)
Q Consensus 221 -------------------------------------------~~~-~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iw 254 (308)
+.. .+.+|...|++++|+|+ +|++++.||.|++|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw 333 (351)
T 3f3f_A 254 LASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLW 333 (351)
T ss_dssp -------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEE
T ss_pred cccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEE
Confidence 233 56789999999999999 89999999999999
Q ss_pred EcCCCCcccccceecc
Q 021744 255 KFNVTTNCFEPAASLK 270 (308)
Q Consensus 255 d~~~~~~~~~~~~~~~ 270 (308)
|+.++.. ++.+..+.
T Consensus 334 ~~~~~~~-~~~~~~~~ 348 (351)
T 3f3f_A 334 KATYSNE-FKCMSVIT 348 (351)
T ss_dssp EECTTSC-EEEEEEEC
T ss_pred ecCcCcc-hhheeehc
Confidence 9998632 23444443
No 88
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.5e-29 Score=220.44 Aligned_cols=221 Identities=12% Similarity=0.154 Sum_probs=183.9
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcc
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSN 101 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~ 101 (308)
.+.+|++++.|+.|++||..++. ....+.+|... +++| ++.. ++++.|++|++||+.......
T Consensus 145 ~~~~l~~~~~dg~i~iwd~~~~~------------~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~ 210 (401)
T 4aez_A 145 DGSFLSVGLGNGLVDIYDVESQT------------KLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQI 210 (401)
T ss_dssp TSSEEEEEETTSCEEEEETTTCC------------EEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEE
T ss_pred CCCEEEEECCCCeEEEEECcCCe------------EEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCccee
Confidence 46789999999999999988761 11223466666 5666 5668 999999999999998555444
Q ss_pred cccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCC-CEEEEee--CCCcEEEE
Q 021744 102 INNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGS-DKLYSGS--KDETVRVW 177 (308)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s--~dg~v~~w 177 (308)
.....|...+..+.|++++.. ++++.|+.|++||+.+. +.+..+.+|...|.+++|+|++ .++++++ .|+.|++|
T Consensus 211 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~ 289 (401)
T 4aez_A 211 GTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS-IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFW 289 (401)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS-SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEE
T ss_pred eEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC-CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEE
Confidence 455667778999999999876 88999999999999998 7888889999999999999976 4556655 79999999
Q ss_pred eCCCCeEEEEEeCCCeeEEE--EcCCCEEEE--Ec-CCcEEEEEcCCCcee---eeeCCCCCEEEEEEeCC--EEEEEcC
Q 021744 178 DCASGQCAGVINLGGEVGCM--ISEGPWIFI--GV-TNFVKAWNTQTNTDL---SLSGPVGQVYAMAVGND--LLFAGTQ 247 (308)
Q Consensus 178 d~~~~~~~~~~~~~~~v~~~--~~~~~~l~~--~~-d~~i~~wd~~~~~~~---~~~~~~~~v~~~~~~~~--~l~~g~~ 247 (308)
|+++++++..+.+...+.++ .++++++++ |. |+.|++||+.+++.. .+.+|...|.+++|+|+ +|++++.
T Consensus 290 d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~ 369 (401)
T 4aez_A 290 NAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAAS 369 (401)
T ss_dssp ETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECT
T ss_pred ECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeC
Confidence 99999999999988888776 478888886 43 999999999987654 46789999999999999 9999999
Q ss_pred CCeEEEEEcCCCC
Q 021744 248 DGAILAWKFNVTT 260 (308)
Q Consensus 248 dg~i~iwd~~~~~ 260 (308)
||.|++|++.+++
T Consensus 370 dg~i~iw~~~~~~ 382 (401)
T 4aez_A 370 DENLKFWRVYDGD 382 (401)
T ss_dssp TSEEEEEECCC--
T ss_pred CCcEEEEECCCCc
Confidence 9999999999873
No 89
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=1.9e-29 Score=218.85 Aligned_cols=229 Identities=12% Similarity=0.029 Sum_probs=187.0
Q ss_pred Cccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCC-----cccccceeeeeeeeeeeecC----C---ce-EEee
Q 021744 63 AATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKN-----SNINNRAVIKTDILCRNWVQ----G---NC-MYGE 126 (308)
Q Consensus 63 ~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~----~---~~-~~g~ 126 (308)
.+.+|... +++|+| ++ ++|+.|++|++||+.+++. .......|...+.++.|+++ + .. ++++
T Consensus 11 ~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~ 88 (397)
T 1sq9_A 11 AGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTS 88 (397)
T ss_dssp ESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred hhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEc
Confidence 34578777 899998 67 9999999999999987761 22234456677999999999 7 55 8899
Q ss_pred CCCeEEEEEcCCCcee-----eeEeeCc-----ccceEEEEEe----CCCCE-EEEeeCCCcEEEEeCCC------CeEE
Q 021744 127 KCKFLHSWTVGDGFKL-----LTQLEGH-----QKVVSGITLP----SGSDK-LYSGSKDETVRVWDCAS------GQCA 185 (308)
Q Consensus 127 ~d~~i~iwd~~~~~~~-----~~~~~~h-----~~~v~~~~~~----~~~~~-l~s~s~dg~v~~wd~~~------~~~~ 185 (308)
.|+.|++|++.++ +. +..+..| ...|.+++|+ |++++ |++++.|+.|++||+++ ++.+
T Consensus 89 ~dg~i~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 167 (397)
T 1sq9_A 89 FSGDLLFYRITRE-DETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTL 167 (397)
T ss_dssp TTSCEEEEEEEEC-TTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTT
T ss_pred CCCCEEEEEccCC-cccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccccee
Confidence 9999999999887 54 7788888 5999999999 99999 99999999999999998 6555
Q ss_pred E-----EEe--------CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCcee-eeeC---C---CCCEEEEEEeCC--
Q 021744 186 G-----VIN--------LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDL-SLSG---P---VGQVYAMAVGND-- 240 (308)
Q Consensus 186 ~-----~~~--------~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~---~---~~~v~~~~~~~~-- 240 (308)
. .+. +...+.++ .+++ ++++++ |+.|++||+++++.. .+.. | ...|.+++|+|+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~ 246 (397)
T 1sq9_A 168 NWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGS 246 (397)
T ss_dssp CCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTT
T ss_pred eccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCC
Confidence 5 553 45566665 4677 888777 899999999998877 6777 8 999999999998
Q ss_pred EEEEEcCC---CeEEEEEcCCCCcccccceeccc-------------cCCCeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 241 LLFAGTQD---GAILAWKFNVTTNCFEPAASLKV-------------HTDSNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 241 ~l~~g~~d---g~i~iwd~~~~~~~~~~~~~~~~-------------~~~~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
+|++++.| +.|++||++++ +++..+.. |...+.+ +|+|++++|++++ +..|.++.
T Consensus 247 ~l~~~~~d~~~g~i~i~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 319 (397)
T 1sq9_A 247 LLAIAHDSNSFGCITLYETEFG----ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWD 319 (397)
T ss_dssp EEEEEEEETTEEEEEEEETTTC----CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred EEEEEecCCCCceEEEEECCCC----cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 99999999 99999999987 67777887 9999999 9999999998666 55555554
No 90
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=4.7e-29 Score=235.50 Aligned_cols=231 Identities=14% Similarity=0.172 Sum_probs=195.5
Q ss_pred Cccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCC
Q 021744 63 AATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGD 138 (308)
Q Consensus 63 ~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~ 138 (308)
.+.+|... +++|+|++.. ++++.|++|+|||+.+++... ....|...+.++.|+|++.. ++++.|+.|++||+.+
T Consensus 8 ~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~ 86 (814)
T 3mkq_A 8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVR-SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT 86 (814)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE-EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT
T ss_pred eeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEE-EEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 34677777 8999999999 999999999999998776543 33457777999999999976 8899999999999999
Q ss_pred CceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCC-eEEEEEe-CCCeeEEE--Ec-CCCEEEEEc-CCcE
Q 021744 139 GFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG-QCAGVIN-LGGEVGCM--IS-EGPWIFIGV-TNFV 212 (308)
Q Consensus 139 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~-~~~~~~~-~~~~v~~~--~~-~~~~l~~~~-d~~i 212 (308)
+ +.+..+.+|.+.|++++|+|++++|++++.||+|++||++++ .....+. +...+.++ .| ++..+++++ |+.|
T Consensus 87 ~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v 165 (814)
T 3mkq_A 87 G-EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (814)
T ss_dssp C-CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred C-cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeE
Confidence 9 788899999999999999999999999999999999999987 6666666 67777776 45 577888766 9999
Q ss_pred EEEEcCCCcee-eeeC-CCCCEEEEEEeC--C--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCC
Q 021744 213 KAWNTQTNTDL-SLSG-PVGQVYAMAVGN--D--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVT 285 (308)
Q Consensus 213 ~~wd~~~~~~~-~~~~-~~~~v~~~~~~~--~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~ 285 (308)
++||+++++.. .+.. +...+.+++|+| + ++++++.||.|++||+.++ +.+..+..|...+.+ +|+|++.
T Consensus 166 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~----~~~~~~~~~~~~v~~~~~~~~~~ 241 (814)
T 3mkq_A 166 KVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK----SCVATLEGHMSNVSFAVFHPTLP 241 (814)
T ss_dssp EEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT----EEEEEEECCSSCEEEEEECSSSS
T ss_pred EEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC----cEEEEEcCCCCCEEEEEEcCCCC
Confidence 99999887765 4444 448899999998 6 9999999999999999987 778888899999999 9999999
Q ss_pred eEEEee-ceEEEEee
Q 021744 286 SLLGSV-SFIMFIGQ 299 (308)
Q Consensus 286 ~l~~s~-s~~i~~~~ 299 (308)
++++++ +..|.++.
T Consensus 242 ~l~~~~~dg~v~vwd 256 (814)
T 3mkq_A 242 IIISGSEDGTLKIWN 256 (814)
T ss_dssp EEEEEETTSCEEEEE
T ss_pred EEEEEeCCCeEEEEE
Confidence 888665 44454444
No 91
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=8.2e-29 Score=214.16 Aligned_cols=194 Identities=8% Similarity=-0.035 Sum_probs=160.7
Q ss_pred Cccccccc--eeEEecCC-Ce-eeccCCCcEEEEECCCCCCccccc-ceeeeeeeeeeeec-CCce-EEeeCCCeEEEEE
Q 021744 63 AATANGAA--AKRFANNT-WG-RNNNFNNHSNNYRAGNSKNSNINN-RAVIKTDILCRNWV-QGNC-MYGEKCKFLHSWT 135 (308)
Q Consensus 63 ~~~gh~~~--~i~~s~~g-~~-~s~~~d~~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~-~~g~~d~~i~iwd 135 (308)
.+.+|... +++|+|++ .+ ++|+.|++|++||+.+++...... ..|...+..+.|+| ++.. ++++.|+.|++||
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 147 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRD 147 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEE
Confidence 34577777 89999999 77 999999999999998776543322 35777899999999 5444 8899999999999
Q ss_pred cCCCceeeeEeeC---cccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe-CCCeeEEE--EcCCC-EEEEEc
Q 021744 136 VGDGFKLLTQLEG---HQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN-LGGEVGCM--ISEGP-WIFIGV 208 (308)
Q Consensus 136 ~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-~~~~v~~~--~~~~~-~l~~~~ 208 (308)
+.+. .+..+.. |...|.+++|+|++++|++++.|+.|++||++ ++.+..+. +...+.++ .++++ ++++++
T Consensus 148 ~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 224 (383)
T 3ei3_B 148 FSGS--VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSS 224 (383)
T ss_dssp TTSC--EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEE
T ss_pred CCCC--ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEe
Confidence 9864 3455544 44889999999999999999999999999994 66777776 77888876 46777 778766
Q ss_pred -CCcEEEEEcCC----CceeeeeCCCCCEEEEEEeC-C--EEEEEcCCCeEEEEEcCCC
Q 021744 209 -TNFVKAWNTQT----NTDLSLSGPVGQVYAMAVGN-D--LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 209 -d~~i~~wd~~~----~~~~~~~~~~~~v~~~~~~~-~--~l~~g~~dg~i~iwd~~~~ 259 (308)
|+.|++||+++ ++.....+|...|.+++|+| + +|++++.|+.|++||+++.
T Consensus 225 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 225 VDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDW 283 (383)
T ss_dssp TTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBT
T ss_pred CCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCC
Confidence 99999999998 55554457999999999999 7 9999999999999999986
No 92
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=3.5e-28 Score=210.59 Aligned_cols=252 Identities=10% Similarity=0.061 Sum_probs=195.6
Q ss_pred CceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc-eeEEecCCCe--eeccCCCcEEEEECCCCCCcccc
Q 021744 27 GLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA-AKRFANNTWG--RNNNFNNHSNNYRAGNSKNSNIN 103 (308)
Q Consensus 27 ~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~-~i~~s~~g~~--~s~~~d~~i~vwd~~~~~~~~~~ 103 (308)
.++++++.|++|++||..++. ......+|... +++|+|+++. ++++.|++|++||+.+++....
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~------------~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~- 69 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNK------------VTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIAT- 69 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTE------------EEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEE-
T ss_pred EEEEEcCCCCEEEEEECCCCe------------EEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEE-
Confidence 368899999999999988761 11122344444 8999999986 6788999999999988765422
Q ss_pred cceeeeeeeeeeeecCCce--EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEE-EEeeCCCcEEEEeCC
Q 021744 104 NRAVIKTDILCRNWVQGNC--MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKL-YSGSKDETVRVWDCA 180 (308)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~--~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~dg~v~~wd~~ 180 (308)
..+...+..+.|+|++.. +++..++.|++||+.++ +.+..+..| ..+.+++|+|+++.+ ++++.|+.|++||++
T Consensus 70 -~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~-~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 146 (391)
T 1l0q_A 70 -VPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN-TVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTV 146 (391)
T ss_dssp -EECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT-EEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred -EECCCCccceEECCCCCEEEEEECCCCEEEEEECCCC-eEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 222336888999999975 45567899999999998 677777754 578999999999977 788889999999999
Q ss_pred CCeEEEEEeCCCeeEEE--EcCCCEEE-EEc-CCcEEEEEcCCCceeeeeCCCCCEEEEEEeCC--EEEEEc---CCCeE
Q 021744 181 SGQCAGVINLGGEVGCM--ISEGPWIF-IGV-TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LLFAGT---QDGAI 251 (308)
Q Consensus 181 ~~~~~~~~~~~~~v~~~--~~~~~~l~-~~~-d~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~--~l~~g~---~dg~i 251 (308)
+++.+..+.....+..+ .+++++++ ++. ++.|++||+++++......+...+.+++|+|+ ++++++ .++.|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v 226 (391)
T 1l0q_A 147 TKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTV 226 (391)
T ss_dssp TTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEE
T ss_pred CCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcE
Confidence 99999888855555544 57888775 555 88999999999988755556778999999998 677666 68999
Q ss_pred EEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee--ceEEEEee
Q 021744 252 LAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV--SFIMFIGQ 299 (308)
Q Consensus 252 ~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~--s~~i~~~~ 299 (308)
++||+.++ +.+..+..+.. +.. +|+|++++|++++ +..+.++.
T Consensus 227 ~~~d~~~~----~~~~~~~~~~~-~~~~~~s~dg~~l~~s~~~d~~v~v~d 272 (391)
T 1l0q_A 227 SMIDTGTN----KITARIPVGPD-PAGIAVTPDGKKVYVALSFXNTVSVID 272 (391)
T ss_dssp EEEETTTT----EEEEEEECCSS-EEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEEECCCC----eEEEEEecCCC-ccEEEEccCCCEEEEEcCCCCEEEEEE
Confidence 99999986 66677776654 555 9999999886543 55555554
No 93
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=2.4e-29 Score=215.39 Aligned_cols=234 Identities=13% Similarity=0.098 Sum_probs=187.2
Q ss_pred cccccc--eeEEecC---CC-e-eeccCCCcEEEEECCCCCCcccccc----eeeeeeeeeeeecC----Cce-EEeeCC
Q 021744 65 TANGAA--AKRFANN---TW-G-RNNNFNNHSNNYRAGNSKNSNINNR----AVIKTDILCRNWVQ----GNC-MYGEKC 128 (308)
Q Consensus 65 ~gh~~~--~i~~s~~---g~-~-~s~~~d~~i~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~~----~~~-~~g~~d 128 (308)
.+|... +++|+|+ +. . ++++.++.|++||+.+++.+..... .+...+.++.|+++ +.. ++|+.|
T Consensus 15 ~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d 94 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR 94 (366)
T ss_dssp CTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT
T ss_pred cCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC
Confidence 367777 8999984 43 4 7777777999999987655422211 13345899999999 434 889999
Q ss_pred CeEEEEEcCCCceeeeEeeCcccceEEEEEeC-CCCEEEEeeCCCcEEEEeCCCCeEEEEE----eCCCeeEEE--EcCC
Q 021744 129 KFLHSWTVGDGFKLLTQLEGHQKVVSGITLPS-GSDKLYSGSKDETVRVWDCASGQCAGVI----NLGGEVGCM--ISEG 201 (308)
Q Consensus 129 ~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~----~~~~~v~~~--~~~~ 201 (308)
+.|++||+.++ +.+..+.+|...|.+++|+| ++.+|++++.|+.|++||+++++.+..+ .+...+.++ .+++
T Consensus 95 g~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 173 (366)
T 3k26_A 95 GIIRIINPITM-QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLG 173 (366)
T ss_dssp CEEEEECTTTC-CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTS
T ss_pred CEEEEEEchhc-eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCC
Confidence 99999999998 78889999999999999999 8999999999999999999999999988 277778776 3778
Q ss_pred CEEEEEc-CCcEEEEEcCCCcee-ee----------------------------eCCCCCEEEEEEeCCEEEEEcCCCeE
Q 021744 202 PWIFIGV-TNFVKAWNTQTNTDL-SL----------------------------SGPVGQVYAMAVGNDLLFAGTQDGAI 251 (308)
Q Consensus 202 ~~l~~~~-d~~i~~wd~~~~~~~-~~----------------------------~~~~~~v~~~~~~~~~l~~g~~dg~i 251 (308)
++|++++ |+.|++||+++++.. .+ ..|...|.+++|+++++++++.|+.|
T Consensus 174 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i 253 (366)
T 3k26_A 174 EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAI 253 (366)
T ss_dssp SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEE
T ss_pred CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEE
Confidence 8888776 999999999987543 22 23889999999997799999999999
Q ss_pred EEEEcCCCCcc----------cccceeccccCCCeEE-EEecC--CCeEEEee-ceEEEEee
Q 021744 252 LAWKFNVTTNC----------FEPAASLKVHTDSNRA-HFSRD--VTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 252 ~iwd~~~~~~~----------~~~~~~~~~~~~~v~~-~~s~d--~~~l~~s~-s~~i~~~~ 299 (308)
++||+.+.... ...+..+..|...+.+ +|+|+ +++|++++ +..|.++.
T Consensus 254 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd 315 (366)
T 3k26_A 254 VCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWD 315 (366)
T ss_dssp EEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEE
T ss_pred EEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEE
Confidence 99999875320 1235667788889999 99999 99998665 44454444
No 94
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.9e-30 Score=229.81 Aligned_cols=220 Identities=7% Similarity=-0.049 Sum_probs=165.7
Q ss_pred ecCCCe-eeccCCCcEEEEECCCCCCccc---ccceeeeeeeeeeeecC------C-ceEEeeCCCeEEEEEcCCCce--
Q 021744 75 ANNTWG-RNNNFNNHSNNYRAGNSKNSNI---NNRAVIKTDILCRNWVQ------G-NCMYGEKCKFLHSWTVGDGFK-- 141 (308)
Q Consensus 75 s~~g~~-~s~~~d~~i~vwd~~~~~~~~~---~~~~~~~~~~~~~~~~~------~-~~~~g~~d~~i~iwd~~~~~~-- 141 (308)
+|++.. ++++.|++|+|||+++++.... ....+...+..+.|+|+ + .+++++.|++|++||+.++..
T Consensus 170 ~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~ 249 (524)
T 2j04_B 170 NEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDV 249 (524)
T ss_dssp ------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSS
T ss_pred chhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccc
Confidence 455556 7888999999999977653211 12334556899999986 2 348899999999999976521
Q ss_pred --------eeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCe-EEEEEe-CCCeeEEE--E--cCC-CEEEE
Q 021744 142 --------LLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQ-CAGVIN-LGGEVGCM--I--SEG-PWIFI 206 (308)
Q Consensus 142 --------~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~-~~~~~~-~~~~v~~~--~--~~~-~~l~~ 206 (308)
+...+.+|...|++++|+++ ..|++|+.||+|++||+++++ +...+. |...|.++ . +++ .+|++
T Consensus 250 ~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS 328 (524)
T 2j04_B 250 HVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVST 328 (524)
T ss_dssp SEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEE
T ss_pred ccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEE
Confidence 23467889999999999986 489999999999999999764 444455 78888877 2 345 78887
Q ss_pred Ec-CCcEEEEEcCCCcee-eeeCCCC--CEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-E
Q 021744 207 GV-TNFVKAWNTQTNTDL-SLSGPVG--QVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-H 279 (308)
Q Consensus 207 ~~-d~~i~~wd~~~~~~~-~~~~~~~--~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~ 279 (308)
++ |++|++||+++++.. .+.+|.. .|.+++|+|+ .+++++.|+.|++||++++ ..+..+.+|...|++ +
T Consensus 329 ~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~----~~~~~l~gH~~~V~sva 404 (524)
T 2j04_B 329 VAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAA----FAVHPLVSRETTITAIG 404 (524)
T ss_dssp EETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCT----TCCEEEEECSSCEEEEE
T ss_pred eccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECccc----ccceeeecCCCceEEEE
Confidence 76 999999999987765 5555543 5889999998 8999999999999999986 666778899999999 9
Q ss_pred EecCCCeEEEee-ceEEEEee
Q 021744 280 FSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 280 ~s~d~~~l~~s~-s~~i~~~~ 299 (308)
|+|++++|++++ +..+.++.
T Consensus 405 ~Sp~g~~l~Sgs~Dgtv~lwd 425 (524)
T 2j04_B 405 VSRLHPMVLAGSADGSLIITN 425 (524)
T ss_dssp CCSSCCBCEEEETTTEEECCB
T ss_pred eCCCCCeEEEEECCCEEEEEe
Confidence 999999988655 66666654
No 95
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=4.7e-29 Score=211.93 Aligned_cols=231 Identities=13% Similarity=0.059 Sum_probs=185.3
Q ss_pred ccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCC--cccccceeeeeeeeeeeecCCc-e-EEeeCCCeEEEEEc-C
Q 021744 66 ANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKN--SNINNRAVIKTDILCRNWVQGN-C-MYGEKCKFLHSWTV-G 137 (308)
Q Consensus 66 gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~-~~g~~d~~i~iwd~-~ 137 (308)
+|... +++|+|++.+ ++++.|++|++||+.+++. .......|...+.++.|++++. . ++++.|+.|++||+ .
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 88 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG 88 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc
Confidence 56666 8999999999 9999999999999977651 1123346667799999999998 5 88999999999999 7
Q ss_pred CCceeeeEeeC--cccceEEEEEeCCCCEEEEeeCCCcEEEEeCCC---------CeEEEEEeCCCeeEEEEcCCCEEEE
Q 021744 138 DGFKLLTQLEG--HQKVVSGITLPSGSDKLYSGSKDETVRVWDCAS---------GQCAGVINLGGEVGCMISEGPWIFI 206 (308)
Q Consensus 138 ~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~---------~~~~~~~~~~~~v~~~~~~~~~l~~ 206 (308)
++. ...+.+ |...|.+++|+| +.++++++.|+.|++||+++ ++++..+.+...+.++......+++
T Consensus 89 ~~~--~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~ 165 (342)
T 1yfq_A 89 SPS--FQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIV 165 (342)
T ss_dssp SSS--EEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEE
T ss_pred CCc--eEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCcEEE
Confidence 773 467888 999999999999 99999999999999999987 7767667777888887533333665
Q ss_pred Ec-CCcEEEEEcCC-Ccee---eeeCCCCCEEEEEEeC-C--EEEEEcCCCeEEEEEcCCC--CcccccceeccccCC--
Q 021744 207 GV-TNFVKAWNTQT-NTDL---SLSGPVGQVYAMAVGN-D--LLFAGTQDGAILAWKFNVT--TNCFEPAASLKVHTD-- 274 (308)
Q Consensus 207 ~~-d~~i~~wd~~~-~~~~---~~~~~~~~v~~~~~~~-~--~l~~g~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~-- 274 (308)
+. ++.|++||+++ +... ....|...+.+++|+| + ++++++.||.|++|+++.. ....+....+..|..
T Consensus 166 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (342)
T 1yfq_A 166 GMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL 245 (342)
T ss_dssp EESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCT
T ss_pred EeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccc
Confidence 55 99999999998 5432 4557888999999999 7 9999999999999999875 111145566766654
Q ss_pred -------CeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 275 -------SNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 275 -------~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
.+.+ +|+|++++|++++ +..|+++.
T Consensus 246 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd 279 (342)
T 1yfq_A 246 KDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWN 279 (342)
T ss_dssp TCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred cccccceeEEEEEEcCCCCEEEEecCCceEEEEc
Confidence 8999 9999999998665 54555544
No 96
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.1e-28 Score=208.51 Aligned_cols=221 Identities=8% Similarity=0.064 Sum_probs=184.5
Q ss_pred Cccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCC
Q 021744 63 AATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGD 138 (308)
Q Consensus 63 ~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~ 138 (308)
.+.+|... +++|+|++++ ++++.|+.|++||+.+++... ....|...+..+.|++++.. ++++.|+.|++||+.+
T Consensus 27 ~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 105 (369)
T 3zwl_B 27 KLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLG-TLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSN 105 (369)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEE-EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT
T ss_pred EEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhh-hhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 45688887 8999999999 999999999999998776542 34557777999999999866 8899999999999999
Q ss_pred CceeeeEeeCcccceEEEEEeCCCCEEEEeeCC-----CcEEEEeCCCCeEE-----------EEEe-CCC--eeEEE--
Q 021744 139 GFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKD-----ETVRVWDCASGQCA-----------GVIN-LGG--EVGCM-- 197 (308)
Q Consensus 139 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d-----g~v~~wd~~~~~~~-----------~~~~-~~~--~v~~~-- 197 (308)
+ +.+..+. |...|.+++|+|+++++++++.+ +.|++||++..... ..+. +.. .+.++
T Consensus 106 ~-~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (369)
T 3zwl_B 106 G-QCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGW 183 (369)
T ss_dssp C-CEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEE
T ss_pred C-cEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEE
Confidence 8 6777777 88999999999999999999999 99999998865322 2222 222 55554
Q ss_pred EcCCCEEEEEc-CCcEEEEEcCC-Ccee-eeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceecccc
Q 021744 198 ISEGPWIFIGV-TNFVKAWNTQT-NTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVH 272 (308)
Q Consensus 198 ~~~~~~l~~~~-d~~i~~wd~~~-~~~~-~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~ 272 (308)
.++++++++++ ++.|++||+++ .+.. .+..|...|.+++|+|+ +|++++.|+.|++||++++ +.+..+. +
T Consensus 184 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~----~~~~~~~-~ 258 (369)
T 3zwl_B 184 STKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL----QVLKKYE-T 258 (369)
T ss_dssp CGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC----CEEEEEE-C
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCC----ceeeeec-C
Confidence 47888888776 99999999998 5555 78889999999999999 9999999999999999986 5566665 6
Q ss_pred CCCeEE-EEecCCCeEEEee
Q 021744 273 TDSNRA-HFSRDVTSLLGSV 291 (308)
Q Consensus 273 ~~~v~~-~~s~d~~~l~~s~ 291 (308)
...+.. +|+|+++++++++
T Consensus 259 ~~~~~~~~~~~~~~~l~~~~ 278 (369)
T 3zwl_B 259 DCPLNTAVITPLKEFIILGG 278 (369)
T ss_dssp SSCEEEEEECSSSSEEEEEE
T ss_pred CCCceeEEecCCCceEEEee
Confidence 677888 9999999998665
No 97
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=1e-28 Score=225.73 Aligned_cols=256 Identities=13% Similarity=0.109 Sum_probs=192.8
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCcc---ccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCC
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAAT---ANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKN 99 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~---gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~ 99 (308)
+.++++++.|+.|++||..++ .+...... +|... +++|+ ++.+ ++++.|++|++||+.+++.
T Consensus 219 ~~~l~~~~~dg~i~vwd~~~~-----------~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~ 286 (615)
T 1pgu_A 219 GEFVITVGSDRKISCFDGKSG-----------EFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKC 286 (615)
T ss_dssp CCEEEEEETTCCEEEEETTTC-----------CEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEE
T ss_pred CCEEEEEeCCCeEEEEECCCC-----------CEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcE
Confidence 678999999999999998876 11111112 56555 89999 9988 9999999999999987765
Q ss_pred cccccce---eeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCC---------------
Q 021744 100 SNINNRA---VIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSG--------------- 161 (308)
Q Consensus 100 ~~~~~~~---~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~--------------- 161 (308)
....... +...+..+.+......++++.|+.|++||+.++ +.+..+.+|...|.+++| |+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~-~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~ 364 (615)
T 1pgu_A 287 VQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHD-EVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSS 364 (615)
T ss_dssp EEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEE-EEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTT
T ss_pred EEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCC-cEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEc
Confidence 4322111 123355666653345589999999999999987 777888777777777766 54
Q ss_pred ------------------CCEEEEeeCCCcEEEEeCC----------------------------------CCeEEEEEe
Q 021744 162 ------------------SDKLYSGSKDETVRVWDCA----------------------------------SGQCAGVIN 189 (308)
Q Consensus 162 ------------------~~~l~s~s~dg~v~~wd~~----------------------------------~~~~~~~~~ 189 (308)
+..+++++.|+.|++||+. +++.+..+.
T Consensus 365 ~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (615)
T 1pgu_A 365 SSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVR 444 (615)
T ss_dssp TEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred hhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecc
Confidence 5666777777777766654 344445555
Q ss_pred CCCeeEEEEcCCCEEEEEc--CCcEEEEEcCCCce--eeeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCccc
Q 021744 190 LGGEVGCMISEGPWIFIGV--TNFVKAWNTQTNTD--LSLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCF 263 (308)
Q Consensus 190 ~~~~v~~~~~~~~~l~~~~--d~~i~~wd~~~~~~--~~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~ 263 (308)
+...+.++...+++++++. ++.|++||+.+++. ..+..|...|.+++|+|+ +|++++.||.|++||+.++
T Consensus 445 ~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~---- 520 (615)
T 1pgu_A 445 LNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSR---- 520 (615)
T ss_dssp CSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT----
T ss_pred cCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCC----
Confidence 5566666643377888665 78999999998877 467789999999999999 9999999999999999987
Q ss_pred ccceeccc-cCCCeEE-EEec----------CCCeEEEee-ceEEEEee
Q 021744 264 EPAASLKV-HTDSNRA-HFSR----------DVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 264 ~~~~~~~~-~~~~v~~-~~s~----------d~~~l~~s~-s~~i~~~~ 299 (308)
+++..+.+ |...|++ +|+| ++++|++++ +..|+++.
T Consensus 521 ~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~ 569 (615)
T 1pgu_A 521 EVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYS 569 (615)
T ss_dssp EEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEE
T ss_pred cceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEE
Confidence 77777887 9999999 9999 999999666 44444444
No 98
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.4e-28 Score=213.68 Aligned_cols=233 Identities=8% Similarity=-0.010 Sum_probs=180.2
Q ss_pred ccccc--eeEEecCCCe--eeccCCCcEEEEECC--CCCCccccc-ceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcC
Q 021744 66 ANGAA--AKRFANNTWG--RNNNFNNHSNNYRAG--NSKNSNINN-RAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVG 137 (308)
Q Consensus 66 gh~~~--~i~~s~~g~~--~s~~~d~~i~vwd~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~ 137 (308)
+|... +++|+|++++ ++++.|++|++||+. +++...... ..+...+..+.|+|++.. ++++.++.|++|++.
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~ 179 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDIN 179 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecC
Confidence 34444 8999999998 789999999999998 665443222 134456889999999976 889999999999998
Q ss_pred CCceee----eEeeCcccceEEEEEeCC---CCEEEEeeCCCcEEEEeCCCCeEEEEEe--CCCeeEEE-EcCCCEEEEE
Q 021744 138 DGFKLL----TQLEGHQKVVSGITLPSG---SDKLYSGSKDETVRVWDCASGQCAGVIN--LGGEVGCM-ISEGPWIFIG 207 (308)
Q Consensus 138 ~~~~~~----~~~~~h~~~v~~~~~~~~---~~~l~s~s~dg~v~~wd~~~~~~~~~~~--~~~~v~~~-~~~~~~l~~~ 207 (308)
+. +.. ..+.+|...|.+++|+|+ +++|++++.|++|++||+++++.+..+. |...+.++ +.++++|+++
T Consensus 180 ~~-~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~sd~~~l~s~ 258 (450)
T 2vdu_B 180 SI-PEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCGKDYLLLSA 258 (450)
T ss_dssp SC-CCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEECSTTEEEEE
T ss_pred Cc-ccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEECCCCEEEEE
Confidence 77 333 377889999999999999 8999999999999999999998887754 67777766 2388899987
Q ss_pred c-CCcEEEEEcCCCcee-eee-------------------------CCCCCEEEEEEeCC--EEEEEc-CCCeEEEEEc-
Q 021744 208 V-TNFVKAWNTQTNTDL-SLS-------------------------GPVGQVYAMAVGND--LLFAGT-QDGAILAWKF- 256 (308)
Q Consensus 208 ~-d~~i~~wd~~~~~~~-~~~-------------------------~~~~~v~~~~~~~~--~l~~g~-~dg~i~iwd~- 256 (308)
+ |+.|++||+++++.+ .+. .....|.+++++|+ ++++++ .|+.|++|++
T Consensus 259 ~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~ 338 (450)
T 2vdu_B 259 GGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMS 338 (450)
T ss_dssp ESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEEC
T ss_pred eCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEec
Confidence 6 999999999999866 443 22357899999998 777777 8999999999
Q ss_pred -CCCCcccccceeccccCCCeEE-EEecCCCeEEEee---------ceEEEEeecC
Q 021744 257 -NVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV---------SFIMFIGQNN 301 (308)
Q Consensus 257 -~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~---------s~~i~~~~~~ 301 (308)
..+ ..++.+..+..| ..+.+ +|+|++.++++.. .+.+|.....
T Consensus 339 ~~~~-~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 339 EKQK-GDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp SSST-TCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred cCCC-CceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 332 113556667777 67777 9999653333322 1477776644
No 99
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=2.6e-28 Score=223.15 Aligned_cols=256 Identities=10% Similarity=0.066 Sum_probs=199.7
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc---eeEEec--CCCe-eeccCCCcEEEEECCCC--
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA---AKRFAN--NTWG-RNNNFNNHSNNYRAGNS-- 97 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~---~i~~s~--~g~~-~s~~~d~~i~vwd~~~~-- 97 (308)
+.++|+++ ++.|++|+..++.... .....+.+|... +++|+| ++++ ++++.|++|++||+.++
T Consensus 30 g~~l~~~~-~~~v~v~~~~~~~~~~--------~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~ 100 (615)
T 1pgu_A 30 TNAIAYPC-GKSAFVRCLDDGDSKV--------PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKE 100 (615)
T ss_dssp TTEEEEEE-TTEEEEEECCSSCCSS--------CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGG
T ss_pred CCEEEEec-CCeEEEEECCCCCCcc--------ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcc
Confidence 56788877 8899999987541100 112223455543 799999 9999 99999999999999644
Q ss_pred ----C-CcccccceeeeeeeeeeeecCCce-EEeeCC----CeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCC-EEE
Q 021744 98 ----K-NSNINNRAVIKTDILCRNWVQGNC-MYGEKC----KFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSD-KLY 166 (308)
Q Consensus 98 ----~-~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d----~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~ 166 (308)
+ ........|...+..+.|+|++.. ++++.+ +.|++|| .+ +.+..+.+|...|.+++|+|+++ .++
T Consensus 101 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~ 177 (615)
T 1pgu_A 101 SNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SG-NSLGEVSGHSQRINACHLKQSRPMRSM 177 (615)
T ss_dssp GTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TC-CEEEECCSCSSCEEEEEECSSSSCEEE
T ss_pred cccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CC-CcceeeecCCccEEEEEECCCCCcEEE
Confidence 1 112233445667999999999977 667766 6888888 44 56888999999999999999997 799
Q ss_pred EeeCCCcEEEEeCCCCeEEEEEe-CCC---eeEEE--EcC-CCEEEEEc-CCcEEEEEcCCCcee-ee-e---CCCCCEE
Q 021744 167 SGSKDETVRVWDCASGQCAGVIN-LGG---EVGCM--ISE-GPWIFIGV-TNFVKAWNTQTNTDL-SL-S---GPVGQVY 233 (308)
Q Consensus 167 s~s~dg~v~~wd~~~~~~~~~~~-~~~---~v~~~--~~~-~~~l~~~~-d~~i~~wd~~~~~~~-~~-~---~~~~~v~ 233 (308)
+++.|+.|++||+++++.+..+. +.. .+.++ .++ +++|++++ |+.|++||+++++.. .+ . .|...|.
T Consensus 178 ~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~ 257 (615)
T 1pgu_A 178 TVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIF 257 (615)
T ss_dssp EEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEE
T ss_pred EEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceE
Confidence 99999999999999999999888 666 67766 477 88888776 999999999999887 55 4 8999999
Q ss_pred EEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceecccc----CCCeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 234 AMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVH----TDSNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 234 ~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~----~~~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
+++|+ + +|++++.|+.|++||++++ +.+..+..+ ...+.. .|+ ++.++++++ +..|.++.
T Consensus 258 ~~~~~-~~~~l~~~~~d~~i~~wd~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d 325 (615)
T 1pgu_A 258 ALSWL-DSQKFATVGADATIRVWDVTTS----KCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYE 325 (615)
T ss_dssp EEEES-SSSEEEEEETTSEEEEEETTTT----EEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEE
T ss_pred EEEEc-CCCEEEEEcCCCcEEEEECCCC----cEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEE
Confidence 99998 6 9999999999999999986 666666655 355666 665 777777554 55555544
No 100
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=1.5e-28 Score=210.46 Aligned_cols=234 Identities=13% Similarity=0.096 Sum_probs=184.2
Q ss_pred Cccccccc--eeEEecC---CCe-eeccCCCcEEEEECCC-CCCcccccceeeeeeeeeeeecCCce-EEeeCCCeEEEE
Q 021744 63 AATANGAA--AKRFANN---TWG-RNNNFNNHSNNYRAGN-SKNSNINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSW 134 (308)
Q Consensus 63 ~~~gh~~~--~i~~s~~---g~~-~s~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iw 134 (308)
.+.+|... +++|+|+ |.+ ++|+.|++|++||+.+ ++........|...+..+.|+|++.. ++++.|+.|++|
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw 113 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMW 113 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEE
Confidence 34677777 8999999 578 9999999999999987 44443456677888999999999976 889999999999
Q ss_pred EcCCCceeeeEeeCcccceEEEEE--eCCCCEEEEeeCCCcEEEEeCCCCeEEEEEeCCCeeEEEEcCCCEEEE-EcCCc
Q 021744 135 TVGDGFKLLTQLEGHQKVVSGITL--PSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFI-GVTNF 211 (308)
Q Consensus 135 d~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~~~~v~~~~~~~~~l~~-~~d~~ 211 (308)
|+.++ +.+. +.+|...|.+++| +|++.+|++++.|+.|++||+++++.+..+.....+.++......+++ +.++.
T Consensus 114 d~~~~-~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (368)
T 3mmy_A 114 DLSSN-QAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERG 191 (368)
T ss_dssp ETTTT-EEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGC
T ss_pred EcCCC-Ccee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCc
Confidence 99988 5554 5679999999999 889999999999999999999999999999977777777555555555 45999
Q ss_pred EEEEEcCCCcee-e--eeCCCCCEEEEEEeCC------EEEEEcCCCeEEEEEcCCCCcccccceeccccCC--------
Q 021744 212 VKAWNTQTNTDL-S--LSGPVGQVYAMAVGND------LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTD-------- 274 (308)
Q Consensus 212 i~~wd~~~~~~~-~--~~~~~~~v~~~~~~~~------~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-------- 274 (308)
+.+||++..... . ...+...+.++.+.++ .+++++.||.|++||++.... ...+..+..|..
T Consensus 192 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 270 (368)
T 3mmy_A 192 LIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP-AKDNFTFKCHRSNGTNTSAP 270 (368)
T ss_dssp EEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCH-HHHSEEEECSEEC----CCC
T ss_pred EEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCc-cccceeeeeeeccccccccc
Confidence 999999887544 1 2223445566665543 499999999999999987631 134556666665
Q ss_pred ----CeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 275 ----SNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 275 ----~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
.+.+ +|+|++++|++++ +..|.++.
T Consensus 271 ~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd 301 (368)
T 3mmy_A 271 QDIYAVNGIAFHPVHGTLATVGSDGRFSFWD 301 (368)
T ss_dssp EEECCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred ccccceEEEEEecCCCEEEEEccCCeEEEEE
Confidence 6888 9999999998665 55555544
No 101
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.6e-28 Score=203.05 Aligned_cols=226 Identities=14% Similarity=0.094 Sum_probs=184.5
Q ss_pred CCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcC
Q 021744 62 PAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVG 137 (308)
Q Consensus 62 ~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~ 137 (308)
..+.+|... +++| |++.+ ++++.|++|++||+.+++.. .....|...+..+.|+|++.. ++++.|+.|++|++.
T Consensus 12 ~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~ 89 (313)
T 3odt_A 12 ATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLG-TVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLF 89 (313)
T ss_dssp EEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEE-EEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred HHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEE-EEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEee
Confidence 345688877 8899 99999 99999999999999766433 234456677999999999976 889999999999987
Q ss_pred CCc--eeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe-CCCeeEEE--Ec-CCCEEEEEc-CC
Q 021744 138 DGF--KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN-LGGEVGCM--IS-EGPWIFIGV-TN 210 (308)
Q Consensus 138 ~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-~~~~v~~~--~~-~~~~l~~~~-d~ 210 (308)
... +.+..+.+|...|.+++| +++++++++.|+.|++|| .++.+..+. +...+.++ .+ +++++++++ |+
T Consensus 90 ~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 165 (313)
T 3odt_A 90 ATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADK 165 (313)
T ss_dssp CCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTS
T ss_pred ecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCC
Confidence 542 557788899999999999 467999999999999999 667777776 66777655 34 788888766 99
Q ss_pred cEEEEEcCCCcee-eeeC-CCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCe
Q 021744 211 FVKAWNTQTNTDL-SLSG-PVGQVYAMAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTS 286 (308)
Q Consensus 211 ~i~~wd~~~~~~~-~~~~-~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~ 286 (308)
.|++||. .+.. .+.. |...+.+++|+|+ .+++++.||.|++||++++ +++..+..|...+.+ +|+|++.+
T Consensus 166 ~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~----~~~~~~~~~~~~i~~~~~~~~~~l 239 (313)
T 3odt_A 166 TIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTG----DVLRTYEGHESFVYCIKLLPNGDI 239 (313)
T ss_dssp CEEEEET--TEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTC----CEEEEEECCSSCEEEEEECTTSCE
T ss_pred CEEEEec--CceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCch----hhhhhhhcCCceEEEEEEecCCCE
Confidence 9999993 3333 4554 8899999999999 9999999999999999987 778888899999999 99999965
Q ss_pred EEEeeceEEEEee
Q 021744 287 LLGSVSFIMFIGQ 299 (308)
Q Consensus 287 l~~s~s~~i~~~~ 299 (308)
++++.+..|.++.
T Consensus 240 ~~~~~dg~v~iwd 252 (313)
T 3odt_A 240 VSCGEDRTVRIWS 252 (313)
T ss_dssp EEEETTSEEEEEC
T ss_pred EEEecCCEEEEEE
Confidence 5455566666665
No 102
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.3e-29 Score=214.79 Aligned_cols=223 Identities=10% Similarity=0.078 Sum_probs=176.8
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecC--CCe-eeccCCCcEEEEECCCCCC-
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANN--TWG-RNNNFNNHSNNYRAGNSKN- 99 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~--g~~-~s~~~d~~i~vwd~~~~~~- 99 (308)
+.+||+++.|++|++|+..... ......+.+|... +++|+|+ +.+ ++++.|++|++||+.+++.
T Consensus 23 ~~~l~~~~~dg~i~iw~~~~~~----------~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 92 (379)
T 3jrp_A 23 GKRLATCSSDKTIKIFEVEGET----------HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWS 92 (379)
T ss_dssp SSEEEEEETTSCEEEEEEETTE----------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEE
T ss_pred CCEEEEEECCCcEEEEecCCCc----------ceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCcee
Confidence 5689999999999999987330 0112234567666 8999877 888 9999999999999987752
Q ss_pred cccccceeeeeeeeeeeecC--Cce-EEeeCCCeEEEEEcCCCc-eeeeEeeCcccceEEEEEeC-------------CC
Q 021744 100 SNINNRAVIKTDILCRNWVQ--GNC-MYGEKCKFLHSWTVGDGF-KLLTQLEGHQKVVSGITLPS-------------GS 162 (308)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~--~~~-~~g~~d~~i~iwd~~~~~-~~~~~~~~h~~~v~~~~~~~-------------~~ 162 (308)
.......|...+..+.|+|+ +.. ++++.|+.|++||+.+.. .....+.+|...|.+++|+| ++
T Consensus 93 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 172 (379)
T 3jrp_A 93 QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKES 172 (379)
T ss_dssp EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTT
T ss_pred EeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCC
Confidence 11233446677999999998 655 899999999999998762 23456778999999999999 68
Q ss_pred CEEEEeeCCCcEEEEeCCCCe----EEEEEe-CCCeeEEE--EcC---CCEEEEEc-CCcEEEEEcCCCc----ee--ee
Q 021744 163 DKLYSGSKDETVRVWDCASGQ----CAGVIN-LGGEVGCM--ISE---GPWIFIGV-TNFVKAWNTQTNT----DL--SL 225 (308)
Q Consensus 163 ~~l~s~s~dg~v~~wd~~~~~----~~~~~~-~~~~v~~~--~~~---~~~l~~~~-d~~i~~wd~~~~~----~~--~~ 225 (308)
.++++++.|+.|++||+++++ .+..+. |...+.++ .++ +++|++++ |+.|++||+++++ .. ..
T Consensus 173 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 252 (379)
T 3jrp_A 173 RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKE 252 (379)
T ss_dssp CEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSS
T ss_pred CEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeecc
Confidence 999999999999999998764 333444 67777776 466 77888776 9999999999874 12 33
Q ss_pred eCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCC
Q 021744 226 SGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNV 258 (308)
Q Consensus 226 ~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~ 258 (308)
..|...|++++|+|+ +|++++.||.|++|++..
T Consensus 253 ~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 253 EKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp SCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred ccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 458889999999999 899999999999999873
No 103
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2e-28 Score=215.99 Aligned_cols=238 Identities=9% Similarity=0.037 Sum_probs=182.2
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCeeeccCCCcEEEEECCCCCCccc
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWGRNNNFNNHSNNYRAGNSKNSNI 102 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~~s~~~d~~i~vwd~~~~~~~~~ 102 (308)
.|.++||+|.|++|+ |.... ..+.+|... +++|+|+| .++++.+|+.+..+.
T Consensus 26 DG~~iASas~D~TV~--d~~~~---------------~~l~gh~~~v~~V~FsPdg------~~~~~~~~~~~~~~~--- 79 (588)
T 2j04_A 26 DGTLYLTTFPDISIG--QPKYA---------------KDINCNSKNLFHVKEFPLE------FENKLDFELAQQNGL--- 79 (588)
T ss_dssp TSCEEEECSSSEEEE--EECCC---------------SCCSSBGGGTEEEEEECCC------CCCTTTTSCCCSSCS---
T ss_pred CCCEEEEEcCCceee--ccccc---------------ceecCCCccEEEEEECCCC------CcceEEEEeCCCceE---
Confidence 378999999999999 63332 223578888 99999999 566666665432222
Q ss_pred ccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCccc-----ceEEEEEeCCCCEEEEeeCCCcEEE
Q 021744 103 NNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQK-----VVSGITLPSGSDKLYSGSKDETVRV 176 (308)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~s~s~dg~v~~ 176 (308)
....+...+..|+|+|+|.. ++++.||.|++||.+. .+..+. |.. .|.+++|+|++++|++|+.||+|++
T Consensus 80 ~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~---~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkI 155 (588)
T 2j04_A 80 LNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK---MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQF 155 (588)
T ss_dssp STTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE---EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEE
T ss_pred eecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc---eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEE
Confidence 22234667999999999975 9999999999999543 566666 665 5999999999999999999999999
Q ss_pred EeCCCCe-------EEEEEe-----CCCeeEEE--EcCCCEEEEEcCCcEEEEEcCCCcee----ee-eCCCCCEEEEEE
Q 021744 177 WDCASGQ-------CAGVIN-----LGGEVGCM--ISEGPWIFIGVTNFVKAWNTQTNTDL----SL-SGPVGQVYAMAV 237 (308)
Q Consensus 177 wd~~~~~-------~~~~~~-----~~~~v~~~--~~~~~~l~~~~d~~i~~wd~~~~~~~----~~-~~~~~~v~~~~~ 237 (308)
||+.++. .+.++. |...+.++ +|++ +++++.|++|++||+.+++.. ++ .+|...|.+++|
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaF 234 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKI 234 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEE
T ss_pred EECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEE
Confidence 9999875 356664 34567766 5777 555566999999999887743 45 478889999999
Q ss_pred eCCEEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EE--ecCCCeEEEee-ceE-EEEe
Q 021744 238 GNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HF--SRDVTSLLGSV-SFI-MFIG 298 (308)
Q Consensus 238 ~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~--s~d~~~l~~s~-s~~-i~~~ 298 (308)
+...+|+++ ++.|++||+.++ +......+|...+.. +| +||++.|+++. +.. +|..
T Consensus 235 sg~~LASa~-~~tIkLWd~~~~----~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~klw~~ 295 (588)
T 2j04_A 235 VDYKVVLTC-PGYVHKIDLKNY----SISSLKTGSLENFHIIPLNHEKESTILLMSNKTSYKVLLE 295 (588)
T ss_dssp ETTEEEEEC-SSEEEEEETTTT----EEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEEEEEES
T ss_pred ECCEEEEEe-CCeEEEEECCCC----eEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCCEEEee
Confidence 933888887 699999999985 332323379999999 99 99998888766 555 5554
No 104
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=2.4e-28 Score=214.74 Aligned_cols=238 Identities=13% Similarity=0.150 Sum_probs=185.8
Q ss_pred cccccc--eeEEecC-CCe-eeccCCCcEEEEECCCC---------CCcccccceeeeeeeeeeeecCCc-e-EEeeCCC
Q 021744 65 TANGAA--AKRFANN-TWG-RNNNFNNHSNNYRAGNS---------KNSNINNRAVIKTDILCRNWVQGN-C-MYGEKCK 129 (308)
Q Consensus 65 ~gh~~~--~i~~s~~-g~~-~s~~~d~~i~vwd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~-~-~~g~~d~ 129 (308)
.+|... +++|+|+ +.+ ++++.|++|++||+.+. .........|...+..+.|++++. . ++|+.||
T Consensus 125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 204 (430)
T 2xyi_A 125 INHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH 204 (430)
T ss_dssp EEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS
T ss_pred EcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC
Confidence 366666 8999998 556 99999999999999652 111123356667789999999886 4 8899999
Q ss_pred eEEEEEcCCCc------eeeeEeeCcccceEEEEEeC-CCCEEEEeeCCCcEEEEeCCCC---eEEEEEe-CCCeeEEE-
Q 021744 130 FLHSWTVGDGF------KLLTQLEGHQKVVSGITLPS-GSDKLYSGSKDETVRVWDCASG---QCAGVIN-LGGEVGCM- 197 (308)
Q Consensus 130 ~i~iwd~~~~~------~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~---~~~~~~~-~~~~v~~~- 197 (308)
.|++|++.+.. .....+.+|...|.+++|+| ++.+|++++.|+.|++||++++ +.+..+. +...+.++
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 284 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLS 284 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEE
T ss_pred eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEE
Confidence 99999998731 11456778999999999999 6788999999999999999987 4666665 77778777
Q ss_pred -EcCCC-EEEEEc-CCcEEEEEcCCC-cee-eeeCCCCCEEEEEEeCC---EEEEEcCCCeEEEEEcCCCCcc-------
Q 021744 198 -ISEGP-WIFIGV-TNFVKAWNTQTN-TDL-SLSGPVGQVYAMAVGND---LLFAGTQDGAILAWKFNVTTNC------- 262 (308)
Q Consensus 198 -~~~~~-~l~~~~-d~~i~~wd~~~~-~~~-~~~~~~~~v~~~~~~~~---~l~~g~~dg~i~iwd~~~~~~~------- 262 (308)
.++++ ++++|+ |+.|++||+++. +.+ .+..|...|.+++|+|+ +|++++.|+.|++||+......
T Consensus 285 ~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 364 (430)
T 2xyi_A 285 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 364 (430)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHH
T ss_pred eCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccc
Confidence 35565 576666 999999999984 333 78889999999999997 7999999999999999873210
Q ss_pred ---cccceeccccCCCeEE-EEecCCC-eEEEee-ceEEEEeecCc
Q 021744 263 ---FEPAASLKVHTDSNRA-HFSRDVT-SLLGSV-SFIMFIGQNNK 302 (308)
Q Consensus 263 ---~~~~~~~~~~~~~v~~-~~s~d~~-~l~~s~-s~~i~~~~~~~ 302 (308)
.+++..+.+|...|+. +|+|++. +|++++ +..|.++.-..
T Consensus 365 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 365 DGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp HCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred cCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 1455667789999999 9999999 455444 66666665443
No 105
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=4e-28 Score=204.03 Aligned_cols=223 Identities=15% Similarity=0.245 Sum_probs=182.8
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCe-eeccCCCcEEEEECCCCCCcccc
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNIN 103 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~ 103 (308)
.+.++|+|+.|++|++|+..++ . ......+|.....++++++.. ++++.++.+++|+..........
T Consensus 78 ~~~~l~sgs~Dg~v~iw~~~~~-----------~-~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~ 145 (318)
T 4ggc_A 78 EGNYLAVGTSSAEVQLWDVQQQ-----------K-RLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVAT 145 (318)
T ss_dssp TSSEEEEEETTSEEEEEETTTT-----------E-EEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred CCCEEEEEECCCcEEEeecCCc-----------e-eEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEE
Confidence 4679999999999999998877 1 122345666666678888888 99999999999999877655555
Q ss_pred cceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCc---eeeeEeeCcccceEEEEEeCCCCEE---EEeeCCCcEEE
Q 021744 104 NRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGF---KLLTQLEGHQKVVSGITLPSGSDKL---YSGSKDETVRV 176 (308)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l---~s~s~dg~v~~ 176 (308)
...|...+..+.+.+++.. ++++.|+.|++||+.+++ ........|...|.+++++|++..+ ++++.+++|++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l 225 (318)
T 4ggc_A 146 LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRI 225 (318)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEE
T ss_pred EcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEE
Confidence 6677777888999999876 889999999999998763 2345566788999999999876543 47788999999
Q ss_pred EeCCCCeEEEEEeCCCeeEEE--EcCCCEEEEE--c-CCcEEEEEcCCCcee-eeeCCCCCEEEEEEeCC--EEEEEcCC
Q 021744 177 WDCASGQCAGVINLGGEVGCM--ISEGPWIFIG--V-TNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQD 248 (308)
Q Consensus 177 wd~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~--~-d~~i~~wd~~~~~~~-~~~~~~~~v~~~~~~~~--~l~~g~~d 248 (308)
||.+..+......+...+... .++++.++++ . |+.|++||+++++++ .+.+|.+.|++++|+|+ +|++|+.|
T Consensus 226 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D 305 (318)
T 4ggc_A 226 WNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAAD 305 (318)
T ss_dssp EETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred EecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC
Confidence 999999888888766666544 5777776643 3 899999999999888 88999999999999999 99999999
Q ss_pred CeEEEEEcCCC
Q 021744 249 GAILAWKFNVT 259 (308)
Q Consensus 249 g~i~iwd~~~~ 259 (308)
|+|+|||+...
T Consensus 306 ~~v~iWd~~~~ 316 (318)
T 4ggc_A 306 ETLRLWRCFEL 316 (318)
T ss_dssp TEEEEECCSCC
T ss_pred CeEEEEECCCC
Confidence 99999999764
No 106
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.2e-27 Score=208.22 Aligned_cols=229 Identities=14% Similarity=0.128 Sum_probs=183.6
Q ss_pred eeEEecCCCe--eeccCCCcEEEEECCCCCC---cccccceeeeeeeeeeeec-CCce-EEeeCCCeEEEEEcCCCc---
Q 021744 71 AKRFANNTWG--RNNNFNNHSNNYRAGNSKN---SNINNRAVIKTDILCRNWV-QGNC-MYGEKCKFLHSWTVGDGF--- 140 (308)
Q Consensus 71 ~i~~s~~g~~--~s~~~d~~i~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~-~~g~~d~~i~iwd~~~~~--- 140 (308)
.++++|+... ++++.||.|+||++..... .......|...+..+.|+| ++.. ++++.|+.|++||+.++.
T Consensus 39 ~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~ 118 (402)
T 2aq5_A 39 FCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVL 118 (402)
T ss_dssp SEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSS
T ss_pred cEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcc
Confidence 5788888766 5789999999999965322 1123456888899999999 7765 899999999999998763
Q ss_pred ---eeeeEeeCcccceEEEEEeCCC-CEEEEeeCCCcEEEEeCCCCeEEEEE--e-CCCeeEEE--EcCCCEEEEEc-CC
Q 021744 141 ---KLLTQLEGHQKVVSGITLPSGS-DKLYSGSKDETVRVWDCASGQCAGVI--N-LGGEVGCM--ISEGPWIFIGV-TN 210 (308)
Q Consensus 141 ---~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~~~~~~~--~-~~~~v~~~--~~~~~~l~~~~-d~ 210 (308)
+.+..+.+|...|.+++|+|++ .+|++++.|++|++||+++++.+..+ . +...+.++ .+++++|++++ |+
T Consensus 119 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 198 (402)
T 2aq5_A 119 PLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDK 198 (402)
T ss_dssp CBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTS
T ss_pred ccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCC
Confidence 3577889999999999999998 69999999999999999999999998 4 67778776 46888888776 99
Q ss_pred cEEEEEcCCCcee-ee-eCCCCC-EEEEEEeCC--EEEEE---cCCCeEEEEEcCCCCcccccceecc-ccCCCeEE-EE
Q 021744 211 FVKAWNTQTNTDL-SL-SGPVGQ-VYAMAVGND--LLFAG---TQDGAILAWKFNVTTNCFEPAASLK-VHTDSNRA-HF 280 (308)
Q Consensus 211 ~i~~wd~~~~~~~-~~-~~~~~~-v~~~~~~~~--~l~~g---~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~-~~ 280 (308)
.|++||+++++.. .+ ..|... +.++.|+|+ +|++| +.|+.|++||+++.. .++.... .|...+.. +|
T Consensus 199 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~v~~~~~ 275 (402)
T 2aq5_A 199 RVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE---EPLSLQELDTSSGVLLPFF 275 (402)
T ss_dssp EEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS---SCSEEEECCCCSSCEEEEE
T ss_pred cEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc---CCceEEeccCCCceeEEEE
Confidence 9999999999887 55 677765 899999999 77888 799999999999863 2233332 46677888 99
Q ss_pred ecCCCeEEEee--c--eEEEEeecCc
Q 021744 281 SRDVTSLLGSV--S--FIMFIGQNNK 302 (308)
Q Consensus 281 s~d~~~l~~s~--s--~~i~~~~~~~ 302 (308)
+|++++|++++ + +.+|-..+.+
T Consensus 276 s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 276 DPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp ETTTTEEEEEETTCSCEEEEEECSST
T ss_pred cCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 99999997544 3 5555555444
No 107
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7e-29 Score=218.27 Aligned_cols=229 Identities=11% Similarity=0.076 Sum_probs=177.4
Q ss_pred cccccc--eeEEec-CCCe-eeccCCCcEEEEECCC---CCCcc-cccceeeeeeeeeeeecCCce-EEeeCCCeEEEEE
Q 021744 65 TANGAA--AKRFAN-NTWG-RNNNFNNHSNNYRAGN---SKNSN-INNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWT 135 (308)
Q Consensus 65 ~gh~~~--~i~~s~-~g~~-~s~~~d~~i~vwd~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd 135 (308)
.+|... +++|+| ++.+ ++|+.|++|+|||+.+ +.... .....|...+.++.|++++.. ++++.|+.|++||
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd 139 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLK 139 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEE
Confidence 577777 899999 9999 9999999999999965 43222 122356777999999998866 8999999999999
Q ss_pred cC---CCceeeeEeeC------------cccceEEEE--EeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe---CCCeeE
Q 021744 136 VG---DGFKLLTQLEG------------HQKVVSGIT--LPSGSDKLYSGSKDETVRVWDCASGQCAGVIN---LGGEVG 195 (308)
Q Consensus 136 ~~---~~~~~~~~~~~------------h~~~v~~~~--~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~---~~~~v~ 195 (308)
+. ++ +....+.+ +...+.++. +++++.+|++++.|+.|++||+++++++..+. +...+.
T Consensus 140 ~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~ 218 (437)
T 3gre_A 140 VNHYQQE-SEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVS 218 (437)
T ss_dssp EEEEEET-TEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEE
T ss_pred eccccCC-ceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceE
Confidence 95 44 33333332 345566666 55789999999999999999999999999887 457777
Q ss_pred EE--EcCCCEEEEEc-CCcEEEEEcCCCcee-eee-CCCCCEEEEEEeC----C--EEEEEcCCCeEEEEEcCCCCcccc
Q 021744 196 CM--ISEGPWIFIGV-TNFVKAWNTQTNTDL-SLS-GPVGQVYAMAVGN----D--LLFAGTQDGAILAWKFNVTTNCFE 264 (308)
Q Consensus 196 ~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~-~~~~~v~~~~~~~----~--~l~~g~~dg~i~iwd~~~~~~~~~ 264 (308)
++ .+++++|++++ |+.|++||+++++.+ .+. .|...|.+++++| + +|++|+.||.|++||++++ +
T Consensus 219 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~----~ 294 (437)
T 3gre_A 219 SICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKG----H 294 (437)
T ss_dssp EEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTT----E
T ss_pred EEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCC----c
Confidence 76 47889999876 999999999998887 444 7778999997665 4 8999999999999999976 4
Q ss_pred cceeccc--------------------------cCCCeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 265 PAASLKV--------------------------HTDSNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 265 ~~~~~~~--------------------------~~~~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
.+..+.. |...|.+ +|+ ++.+|++++ +..|.++.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd 356 (437)
T 3gre_A 295 CQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFS 356 (437)
T ss_dssp EEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEE
T ss_pred EEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEE
Confidence 3333332 5566777 888 667777555 66666655
No 108
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=9.8e-28 Score=211.10 Aligned_cols=217 Identities=17% Similarity=0.235 Sum_probs=183.1
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCC-ceEEeeCCCeEEEEEcCCCceeeeEeeC
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQG-NCMYGEKCKFLHSWTVGDGFKLLTQLEG 148 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~d~~i~iwd~~~~~~~~~~~~~ 148 (308)
..++++++++ ++|+.|++|++||+.+++... ....|...+.++.+ ++ .+++|+.||.|++||+.++ +.+..+.+
T Consensus 136 v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~-~~~~~~~~ 211 (435)
T 1p22_A 136 VYCLQYDDQKIVSGLRDNTIKIWDKNTLECKR-ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG-EMLNTLIH 211 (435)
T ss_dssp EEEEECCSSEEEEEESSSCEEEEESSSCCEEE-EECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC-CEEEEECC
T ss_pred EEEEEECCCEEEEEeCCCeEEEEeCCCCeEEE-EEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCC-cEEEEEcC
Confidence 4577789999 999999999999998776543 34467777888877 44 4499999999999999999 78899999
Q ss_pred cccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEE---EEEe-CCCeeEEEEcCCCEEEEEc-CCcEEEEEcCCCcee
Q 021744 149 HQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCA---GVIN-LGGEVGCMISEGPWIFIGV-TNFVKAWNTQTNTDL 223 (308)
Q Consensus 149 h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~---~~~~-~~~~v~~~~~~~~~l~~~~-d~~i~~wd~~~~~~~ 223 (308)
|...|.+++|++ .++++++.|++|++||+++++.+ ..+. +...+.++..+++++++++ |+.|++||+++++..
T Consensus 212 h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 289 (435)
T 1p22_A 212 HCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFV 289 (435)
T ss_dssp CCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEE
Confidence 999999999974 59999999999999999987655 3333 7778888877889998776 999999999999887
Q ss_pred -eeeCCCCCEEEEEEeCCEEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 224 -SLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 224 -~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
.+.+|...|.++.+++.++++|+.||.|++||++++ +++..+.+|...+.+ +| ++.+|++++ +..|.++.
T Consensus 290 ~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd 362 (435)
T 1p22_A 290 RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG----ACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 362 (435)
T ss_dssp EEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTC----CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEE
T ss_pred EEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCC----CEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEE
Confidence 788999999999998779999999999999999987 778889999999998 88 677787655 44444443
No 109
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.1e-28 Score=208.75 Aligned_cols=215 Identities=7% Similarity=0.048 Sum_probs=164.2
Q ss_pred EEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcC---------CCcee
Q 021744 73 RFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVG---------DGFKL 142 (308)
Q Consensus 73 ~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~---------~~~~~ 142 (308)
.+.+++.. ++|+.|++|++||+.+++.+.... ...+..+.+.|. +++++.|+.|++|+.. +. +.
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~---~~~v~~~~~~~~--~~s~s~D~~i~~w~~~~~~~~~~~~~~-~~ 116 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT---TPNPRTGGEHPA--IISRGPCNRLLLLYPGNQITILDSKTN-KV 116 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE---EECCCTTCCCCS--EEEECSTTEEEEEETTTEEEEEETTTC-CE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe---cCCceeeeeCCc--eEEecCCCeEEEEEccCceEEeecCCc-ce
Confidence 44567777 999999999999998876553222 345777777777 8999999999999765 33 33
Q ss_pred eeEee-CcccceEEEEEeC--CCCEEEEeeCCCcEEEEeCCCCeEEEEEe--CCCeeEEE--EcCCCEEEEEc-CCcEEE
Q 021744 143 LTQLE-GHQKVVSGITLPS--GSDKLYSGSKDETVRVWDCASGQCAGVIN--LGGEVGCM--ISEGPWIFIGV-TNFVKA 214 (308)
Q Consensus 143 ~~~~~-~h~~~v~~~~~~~--~~~~l~s~s~dg~v~~wd~~~~~~~~~~~--~~~~v~~~--~~~~~~l~~~~-d~~i~~ 214 (308)
+..+. +|.+.|.+++|+| +++++++++.|++|++||+++++.+.... +...+.++ .+++.+|++|+ |+.|++
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~i 196 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDV 196 (343)
T ss_dssp EEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred eEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 43443 6778999999999 99999999999999999999999877664 34456555 58899999877 999999
Q ss_pred EEcCCCcee--eeeC-CCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceecc---ccCCCeE--E-EEecC
Q 021744 215 WNTQTNTDL--SLSG-PVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLK---VHTDSNR--A-HFSRD 283 (308)
Q Consensus 215 wd~~~~~~~--~~~~-~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~---~~~~~v~--~-~~s~d 283 (308)
||+++++.. .+.. |..+|++++|+|+ +|++++ |+.|++||+++. +.+..+. .|...+. + +|+|+
T Consensus 197 wd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (343)
T 3lrv_A 197 YNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKD----VGTLAYPTYTIPEFKTGTVTYDIDDS 271 (343)
T ss_dssp EESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSS----TTCBSSCCCBC-----CCEEEEECTT
T ss_pred EECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCC----CcceeecccccccccccceEEEECCC
Confidence 999998866 6777 9999999999999 888888 459999999986 3333333 2434433 5 99999
Q ss_pred CCeEEEee----ceEEEEe
Q 021744 284 VTSLLGSV----SFIMFIG 298 (308)
Q Consensus 284 ~~~l~~s~----s~~i~~~ 298 (308)
+++|++++ .+.+|..
T Consensus 272 g~~l~~~s~~d~~i~v~~~ 290 (343)
T 3lrv_A 272 GKNMIAYSNESNSLTIYKF 290 (343)
T ss_dssp SSEEEEEETTTTEEEEEEE
T ss_pred CCEEEEecCCCCcEEEEEE
Confidence 99999633 4555544
No 110
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=3.3e-28 Score=202.32 Aligned_cols=250 Identities=14% Similarity=0.128 Sum_probs=163.9
Q ss_pred CCCceeEEEeecCCCCC------------CCCCCceEEecCCCeEEEeecCCCCCCCCCc--------ccccCCCCCC--
Q 021744 6 HGGNKRVFHRLGGGGGD------------GGGGGLSTADTRQKVCNYWRAGKCNRFPCPY--------LHRELPLPPA-- 63 (308)
Q Consensus 6 ~~~~~~~~~~~~~~~~~------------~~~~~~~~s~s~d~~i~~W~~~~~~~~~~~~--------~~~~~~~~~~-- 63 (308)
+.||.+.-+.+=++.+. .+....-+....+.+|++|+......+.+.+ ...-.+.+..
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 100 (356)
T 2w18_A 21 NPGNLQLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYN 100 (356)
T ss_dssp ---CEEEEEEECCCCSSCEEEEEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCS
T ss_pred CcceeeeeehhcCCCCCeEEEEeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccc
Confidence 56777777777666321 1112223334457899999988762221111 1111122200
Q ss_pred ----ccccccc----eeEEecC----CCe-eecc--------------------CCCcEEEEECCC-CCCcccccceeee
Q 021744 64 ----ATANGAA----AKRFANN----TWG-RNNN--------------------FNNHSNNYRAGN-SKNSNINNRAVIK 109 (308)
Q Consensus 64 ----~~gh~~~----~i~~s~~----g~~-~s~~--------------------~d~~i~vwd~~~-~~~~~~~~~~~~~ 109 (308)
..|+-.. .++++|+ +.. ++++ .|++|++|++.. ++. ......|..
T Consensus 101 ~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~-~~s~~~~~~ 179 (356)
T 2w18_A 101 LVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGG-KENQFLMPP 179 (356)
T ss_dssp CEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCE-EEEEEECCC
T ss_pred eeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCce-eeeeccCCC
Confidence 0122111 6888888 666 6544 388888888844 432 234456666
Q ss_pred eeeeeeeec---CCce-EEeeCCCeEEEEEcCCCceeeeEeeCcc---cceEEEEEeCCCCEE------------EEeeC
Q 021744 110 TDILCRNWV---QGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQ---KVVSGITLPSGSDKL------------YSGSK 170 (308)
Q Consensus 110 ~~~~~~~~~---~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l------------~s~s~ 170 (308)
.+..+.|++ ++.+ ++++.|++|+|||++++ +.++++.+|. ..+.+++|+|++.++ ++|+.
T Consensus 180 ~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TG-k~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~ 258 (356)
T 2w18_A 180 EETILTFAEVQGMQEALLGTTIMNNIVIWNLKTG-QLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSP 258 (356)
T ss_dssp SSCEEEEEEEETSTTEEEEEETTSEEEEEETTTC-CEEEEEECCC---CCCEEEEEEETTEEEEEEC------------C
T ss_pred ceeeEEeeccCCCCceEEEecCCCcEEEEECCCC-cEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCC
Confidence 677888888 4455 88999999999999999 8889998754 467788999999876 67889
Q ss_pred CCcEEEEeCCCCeEEEEEe------CCCeeEEEEcCCCEEEEEc-CCcEEEEEcCCCcee-eeeCCCCCEE-EEEEeCC-
Q 021744 171 DETVRVWDCASGQCAGVIN------LGGEVGCMISEGPWIFIGV-TNFVKAWNTQTNTDL-SLSGPVGQVY-AMAVGND- 240 (308)
Q Consensus 171 dg~v~~wd~~~~~~~~~~~------~~~~v~~~~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~~~~v~-~~~~~~~- 240 (308)
|++|++||..+++.+..+. +.....+...++.++++++ |++|++||+.+++++ ++.+|...+. +++|+|+
T Consensus 259 D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG 338 (356)
T 2w18_A 259 VFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTD 338 (356)
T ss_dssp CEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSS
T ss_pred CcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCC
Confidence 9999999999999887663 2222333334477888876 999999999999988 7888887655 5899999
Q ss_pred -EEEEEcCCCeEEEEEcC
Q 021744 241 -LLFAGTQDGAILAWKFN 257 (308)
Q Consensus 241 -~l~~g~~dg~i~iwd~~ 257 (308)
+|++|+.|++|+|||+.
T Consensus 339 ~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 339 SHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp SEEEEECTTSCEEEEEEC
T ss_pred CEEEEEECCCcEEEecCC
Confidence 99999999999999963
No 111
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=8.9e-28 Score=211.12 Aligned_cols=231 Identities=11% Similarity=0.074 Sum_probs=179.0
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCC-e-eeccCCCcEEEEECCCCCCc-
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTW-G-RNNNFNNHSNNYRAGNSKNS- 100 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~-~-~s~~~d~~i~vwd~~~~~~~- 100 (308)
+.++|+++.|+.|++|+.......+.+ .........+.+|... +++|+|++. + ++|+.|++|++||+..+...
T Consensus 141 ~~~lat~~~dg~V~vwd~~~~~~~~~~--~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 218 (430)
T 2xyi_A 141 ACVIATKTPSSDVLVFDYTKHPSKPEP--SGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEH 218 (430)
T ss_dssp EEEEEEECSSSCEEEEEGGGSCSSCCT--TCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGG
T ss_pred CcEEEEECCCCcEEEEECCCcccccCc--cccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCC
Confidence 468999999999999998763110000 0001112233467666 899999998 6 99999999999999764321
Q ss_pred -----ccccceeeeeeeeeeeecC-Cce-EEeeCCCeEEEEEcCCCc--eeeeEeeCcccceEEEEEeCCCC-EEEEeeC
Q 021744 101 -----NINNRAVIKTDILCRNWVQ-GNC-MYGEKCKFLHSWTVGDGF--KLLTQLEGHQKVVSGITLPSGSD-KLYSGSK 170 (308)
Q Consensus 101 -----~~~~~~~~~~~~~~~~~~~-~~~-~~g~~d~~i~iwd~~~~~--~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~ 170 (308)
......|...+..+.|+|. +.. ++++.|+.|++||+++.. +.+..+..|...|++++|+|++. ++++|+.
T Consensus 219 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~ 298 (430)
T 2xyi_A 219 RVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSA 298 (430)
T ss_dssp GEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEET
T ss_pred ceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeC
Confidence 1123356667999999994 444 789999999999998762 46777889999999999999887 6899999
Q ss_pred CCcEEEEeCCC-CeEEEEEe-CCCeeEEE--EcCCC-EEEEEc-CCcEEEEEcCCC--------------cee-eeeCCC
Q 021744 171 DETVRVWDCAS-GQCAGVIN-LGGEVGCM--ISEGP-WIFIGV-TNFVKAWNTQTN--------------TDL-SLSGPV 229 (308)
Q Consensus 171 dg~v~~wd~~~-~~~~~~~~-~~~~v~~~--~~~~~-~l~~~~-d~~i~~wd~~~~--------------~~~-~~~~~~ 229 (308)
||+|++||+++ .+++..+. +...+.++ .++++ +|++++ |+.|++||+... +.+ .+.+|.
T Consensus 299 dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 378 (430)
T 2xyi_A 299 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 378 (430)
T ss_dssp TSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCS
T ss_pred CCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCC
Confidence 99999999998 56677776 77788776 46664 566665 999999999872 333 667899
Q ss_pred CCEEEEEEeCC---EEEEEcCCCeEEEEEcCC
Q 021744 230 GQVYAMAVGND---LLFAGTQDGAILAWKFNV 258 (308)
Q Consensus 230 ~~v~~~~~~~~---~l~~g~~dg~i~iwd~~~ 258 (308)
..|++++|+|+ +|++++.||.|++|++..
T Consensus 379 ~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 379 AKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp SCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred CCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 99999999998 899999999999999875
No 112
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=4.3e-28 Score=210.54 Aligned_cols=221 Identities=14% Similarity=0.164 Sum_probs=173.4
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCC---Ce-eeccCCCcEEEEECCCCC
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNT---WG-RNNNFNNHSNNYRAGNSK 98 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g---~~-~s~~~d~~i~vwd~~~~~ 98 (308)
.+.++++++.|+.|++||...+. .... ..+... ++.++|.+ .. ++++.|+.|++||+.+++
T Consensus 111 ~~~~l~s~~~d~~i~iwd~~~~~-----------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 177 (408)
T 4a11_B 111 DTGMFTSSSFDKTLKVWDTNTLQ-----------TADV--FNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS 177 (408)
T ss_dssp CTTCEEEEETTSEEEEEETTTTE-----------EEEE--EECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC
T ss_pred CCcEEEEEeCCCeEEEeeCCCCc-----------ccee--ccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc
Confidence 45689999999999999988761 1100 011222 67887754 47 999999999999998776
Q ss_pred CcccccceeeeeeeeeeeecCCc--eEEeeCCCeEEEEEcCCCceeeeEe---------------eCcccceEEEEEeCC
Q 021744 99 NSNINNRAVIKTDILCRNWVQGN--CMYGEKCKFLHSWTVGDGFKLLTQL---------------EGHQKVVSGITLPSG 161 (308)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~d~~i~iwd~~~~~~~~~~~---------------~~h~~~v~~~~~~~~ 161 (308)
... ....|...+.++.|+|++. +++++.|+.|++||+++....+..+ .+|...|.+++|+|+
T Consensus 178 ~~~-~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 256 (408)
T 4a11_B 178 CSH-ILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSD 256 (408)
T ss_dssp CCE-EECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTT
T ss_pred eee-eecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCC
Confidence 543 3445777799999999986 4789999999999998764344444 578999999999999
Q ss_pred CCEEEEeeCCCcEEEEeCCCCeEEEEEeCC------Ce-eEEE-E-cCCCEEEEEcCCcEEEEEcCCCcee-eeeCCCCC
Q 021744 162 SDKLYSGSKDETVRVWDCASGQCAGVINLG------GE-VGCM-I-SEGPWIFIGVTNFVKAWNTQTNTDL-SLSGPVGQ 231 (308)
Q Consensus 162 ~~~l~s~s~dg~v~~wd~~~~~~~~~~~~~------~~-v~~~-~-~~~~~l~~~~d~~i~~wd~~~~~~~-~~~~~~~~ 231 (308)
+++|++++.|+.|++||+++++....+... .. .... . ....+++++.++.|++||+.+++.+ .+.+|...
T Consensus 257 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~ 336 (408)
T 4a11_B 257 GLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKT 336 (408)
T ss_dssp SSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSC
T ss_pred CCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCe
Confidence 999999999999999999998765544311 11 1112 2 2345566667999999999999888 78899999
Q ss_pred EEEEEEeCC--EEEEEcCCCeEEEEEcCCC
Q 021744 232 VYAMAVGND--LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 232 v~~~~~~~~--~l~~g~~dg~i~iwd~~~~ 259 (308)
|++++|+|+ +|++++.||.|++||+.+.
T Consensus 337 v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 337 VDCCVFQSNFQELYSGSRDCNILAWVPSLY 366 (408)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEEEECC-
T ss_pred EEEEEEcCCCCEEEEECCCCeEEEEeCCCC
Confidence 999999999 9999999999999999987
No 113
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=2.5e-28 Score=214.96 Aligned_cols=219 Identities=9% Similarity=-0.023 Sum_probs=165.3
Q ss_pred ccccc--eeEEecC-CCe-eeccCCCcEEEEECCCCCCcc-cccceeeeeeeeeeeec-CCc-eEEeeCCCeEEEEEcCC
Q 021744 66 ANGAA--AKRFANN-TWG-RNNNFNNHSNNYRAGNSKNSN-INNRAVIKTDILCRNWV-QGN-CMYGEKCKFLHSWTVGD 138 (308)
Q Consensus 66 gh~~~--~i~~s~~-g~~-~s~~~d~~i~vwd~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~-~~~g~~d~~i~iwd~~~ 138 (308)
+|... +++|+|. +.+ |+|+.||+|+|||+.+++... ....+|...|.++.|+| ++. +++++.|++|++||+++
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~ 196 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKG 196 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTS
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccC
Confidence 55555 8999995 456 999999999999998765432 23457888899999997 454 48999999999999987
Q ss_pred CceeeeEee--CcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe-CCCeeEEEE--cCCC-EEEEEc-CCc
Q 021744 139 GFKLLTQLE--GHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN-LGGEVGCMI--SEGP-WIFIGV-TNF 211 (308)
Q Consensus 139 ~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-~~~~v~~~~--~~~~-~l~~~~-d~~ 211 (308)
. ....... .+...+.+++|+|++.+|++|+.||+|++||++.. .+..+. |...+.++. +++. ++++++ |+.
T Consensus 197 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~ 274 (435)
T 4e54_B 197 N-ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-ELWNLRMHKKKVTHVALNPCCDWFLATASVDQT 274 (435)
T ss_dssp C-EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSB
T ss_pred C-ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-eeEEEecccceEEeeeecCCCceEEEEecCcce
Confidence 6 3322222 23456789999999999999999999999999754 444444 777888773 5555 666665 999
Q ss_pred EEEEEcCCCcee----eeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccC-------CCeEE
Q 021744 212 VKAWNTQTNTDL----SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHT-------DSNRA 278 (308)
Q Consensus 212 i~~wd~~~~~~~----~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~-------~~v~~ 278 (308)
|++||+++.+.. ...+|...|++++|+|+ +|++++.||.|++||+.++ +....+..|. ..+..
T Consensus 275 v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~ 350 (435)
T 4e54_B 275 VKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQW----DCPLGLIPHPHRHFQHLTPIKA 350 (435)
T ss_dssp CCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSS----SSEEEECCCCCCCCSSSCCCBC
T ss_pred eeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCC----ccceEEecccccccccceeEEE
Confidence 999999987543 34679999999999999 9999999999999999986 3344443332 12223
Q ss_pred EEecCCCeEEEe
Q 021744 279 HFSRDVTSLLGS 290 (308)
Q Consensus 279 ~~s~d~~~l~~s 290 (308)
.|+|++.+++++
T Consensus 351 ~~~~~~~~~~~~ 362 (435)
T 4e54_B 351 AWHPRYNLIVVG 362 (435)
T ss_dssp EECSSSSCEEEE
T ss_pred EEcCCCCEEEEE
Confidence 677776666543
No 114
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.7e-28 Score=230.44 Aligned_cols=275 Identities=9% Similarity=-0.075 Sum_probs=196.8
Q ss_pred CceEEecCCCeEEEeecCCCCCC-C----CCcc--cc----------------------cCCCCCCccccccc--eeEEe
Q 021744 27 GLSTADTRQKVCNYWRAGKCNRF-P----CPYL--HR----------------------ELPLPPAATANGAA--AKRFA 75 (308)
Q Consensus 27 ~~~~s~s~d~~i~~W~~~~~~~~-~----~~~~--~~----------------------~~~~~~~~~gh~~~--~i~~s 75 (308)
..+++++.|++|++|+...+... + .+.+ |. ......++.||... .++|+
T Consensus 365 ~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~s 444 (902)
T 2oaj_A 365 GLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPA 444 (902)
T ss_dssp SEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCC
T ss_pred eeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCccccc
Confidence 36788889999999998654210 0 0000 00 01123356777766 68999
Q ss_pred cCCCe-eeccCCCcEEEEECCCCCCccccc----------ceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCc---
Q 021744 76 NNTWG-RNNNFNNHSNNYRAGNSKNSNINN----------RAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGF--- 140 (308)
Q Consensus 76 ~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~--- 140 (308)
|+++. |+|+.|++||+||+.+++...... ..|...+..++|+|++.. ++|+.|++|+||++.+++
T Consensus 445 pdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~ 524 (902)
T 2oaj_A 445 EYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYS 524 (902)
T ss_dssp SEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC--
T ss_pred ccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccC
Confidence 99999 999999999999998774321100 156667999999999977 899999999999997651
Q ss_pred -----------------------------------------eeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeC
Q 021744 141 -----------------------------------------KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDC 179 (308)
Q Consensus 141 -----------------------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~ 179 (308)
+++..+.+|.+.|++++|+|+| +|++|+.|++|++||+
T Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~ 603 (902)
T 2oaj_A 525 VENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDR 603 (902)
T ss_dssp -------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEET
T ss_pred ccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEEC
Confidence 2367788999999999999999 9999999999999999
Q ss_pred CCCeEEEEE-------eCCCeeEEE--E-----cCC---CEEEEEc-CCcEEEEEc---CCCcee-eeeCC-----CCCE
Q 021744 180 ASGQCAGVI-------NLGGEVGCM--I-----SEG---PWIFIGV-TNFVKAWNT---QTNTDL-SLSGP-----VGQV 232 (308)
Q Consensus 180 ~~~~~~~~~-------~~~~~v~~~--~-----~~~---~~l~~~~-d~~i~~wd~---~~~~~~-~~~~~-----~~~v 232 (308)
++.+.+... .|...+.++ + +|+ ++|++|+ |++|++||+ .+++.. .+.+| .++|
T Consensus 604 ~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v 683 (902)
T 2oaj_A 604 RGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLMDITNVTSKGPI 683 (902)
T ss_dssp TTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEEEECCSSCCC
T ss_pred CCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEecCceecCCCCce
Confidence 988776432 244557766 4 554 6888877 999999999 666654 45444 4677
Q ss_pred EEEE-Ee----------------------CC-EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEEE---------
Q 021744 233 YAMA-VG----------------------ND-LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRAH--------- 279 (308)
Q Consensus 233 ~~~~-~~----------------------~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~--------- 279 (308)
.+++ |+ ++ ++++++ +..|+||++.++ ++.+....|...+...
T Consensus 684 ~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~-~~~ir~~~~~~~----k~~~k~~~~~~~~~~v~~~~~~~~~ 758 (902)
T 2oaj_A 684 HKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG-FDDIRLITLGKS----KSTHKGFKYPLAATGLSYISTVEKN 758 (902)
T ss_dssp CEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC-SSEEEEECTTCC----CEEEEECSSCEEEEEEEEEEEECSS
T ss_pred EEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe-ccceEEEeCccc----cceeeEcccceeeeEEEEEEecccc
Confidence 7776 65 55 555555 779999999986 5555555554222223
Q ss_pred -EecCCCeEEEee---ceEEEEeecCceeEEe
Q 021744 280 -FSRDVTSLLGSV---SFIMFIGQNNKGVVCY 307 (308)
Q Consensus 280 -~s~d~~~l~~s~---s~~i~~~~~~~~~~~~ 307 (308)
|++++..|++.. .+.+|....-+.+...
T Consensus 759 ~~~~~~~~l~~~~~~g~i~~~s~p~l~~~~~~ 790 (902)
T 2oaj_A 759 NDRKNLTVIITLEINGHLRVFTIPDFKEQMSE 790 (902)
T ss_dssp SCEEEEEEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ccccCceEEEEEeCCCcEEEEECcchHHHhhc
Confidence 568887777544 5666666666666543
No 115
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.6e-28 Score=228.68 Aligned_cols=238 Identities=13% Similarity=0.038 Sum_probs=186.7
Q ss_pred Cccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCC-cccccceeeeeeeeeeeecC--Cce-EEeeCCCeEEEEE
Q 021744 63 AATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKN-SNINNRAVIKTDILCRNWVQ--GNC-MYGEKCKFLHSWT 135 (308)
Q Consensus 63 ~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~-~~g~~d~~i~iwd 135 (308)
.+.+|.+. +++|+|++++ ++|+.||+|+|||+..+.. .......|...+.++.|+++ +.. ++++.||.|++||
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd 83 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 83 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence 35688887 8999999999 9999999999999964321 22234567778999999887 655 8999999999999
Q ss_pred cCCCc-eeeeEeeCcccceEEEEEeCC--CCEEEEeeCCCcEEEEeCCCCeE--EEEE-eCCCeeEEEE--c--------
Q 021744 136 VGDGF-KLLTQLEGHQKVVSGITLPSG--SDKLYSGSKDETVRVWDCASGQC--AGVI-NLGGEVGCMI--S-------- 199 (308)
Q Consensus 136 ~~~~~-~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~dg~v~~wd~~~~~~--~~~~-~~~~~v~~~~--~-------- 199 (308)
+.++. ..+..+.+|...|.+++|+|+ +..+++++.||+|++||++++.. ...+ .+...+.++. +
T Consensus 84 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~ 163 (753)
T 3jro_A 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (753)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC------
T ss_pred CCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccc
Confidence 99872 267788899999999999999 99999999999999999998732 2223 3677777762 4
Q ss_pred -----CCCEEEEEc-CCcEEEEEcCCCc----ee-eeeCCCCCEEEEEEeCC-----EEEEEcCCCeEEEEEcCCCCcc-
Q 021744 200 -----EGPWIFIGV-TNFVKAWNTQTNT----DL-SLSGPVGQVYAMAVGND-----LLFAGTQDGAILAWKFNVTTNC- 262 (308)
Q Consensus 200 -----~~~~l~~~~-d~~i~~wd~~~~~----~~-~~~~~~~~v~~~~~~~~-----~l~~g~~dg~i~iwd~~~~~~~- 262 (308)
++.++++++ |+.|++||++++. .. .+.+|...|++++|+|+ ++++++.||.|++||+.++...
T Consensus 164 ~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~ 243 (753)
T 3jro_A 164 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPW 243 (753)
T ss_dssp ---CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCC
T ss_pred cccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcc
Confidence 367788766 9999999998873 33 67789999999999985 8999999999999999986321
Q ss_pred cccceeccccCCCeEE-EEecCCCeEEEee-ceEEEEeec
Q 021744 263 FEPAASLKVHTDSNRA-HFSRDVTSLLGSV-SFIMFIGQN 300 (308)
Q Consensus 263 ~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~~~ 300 (308)
...+.....|...+.+ +|+|+++++++++ +..|.++.-
T Consensus 244 ~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~ 283 (753)
T 3jro_A 244 KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (753)
T ss_dssp BCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBC
T ss_pred eeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEec
Confidence 1133444568889988 9999999998655 656666553
No 116
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=9.5e-28 Score=211.69 Aligned_cols=212 Identities=10% Similarity=0.036 Sum_probs=165.0
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeee-----eeeeeeeecCCce-EEeeCCCeEEEEEcCCCce--
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIK-----TDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFK-- 141 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~-- 141 (308)
+++|||+|.. |+++.|++|++||.+. .+. ... |.. .+.+++|+|+|.. ++|+.||+|++||+.++..
T Consensus 90 ~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~-~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~ 165 (588)
T 2j04_A 90 VCKPSPIDDWMAVLSNNGNVSVFKDNK--MLT-NLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENT 165 (588)
T ss_dssp EEEECSSSSCEEEEETTSCEEEEETTE--EEE-ECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTC
T ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCc--eee-ecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccc
Confidence 8999999999 9999999999999643 221 122 333 4889999999977 8999999999999998721
Q ss_pred ----eeeEe----eCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeE---EEEEe--CCCeeEEE-EcCCCEEEEE
Q 021744 142 ----LLTQL----EGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQC---AGVIN--LGGEVGCM-ISEGPWIFIG 207 (308)
Q Consensus 142 ----~~~~~----~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~---~~~~~--~~~~v~~~-~~~~~~l~~~ 207 (308)
.+.++ .+|...|.+++|+|++ +++++.|++|++||+..++. ..++. +...+.++ +. ++.|+++
T Consensus 166 ~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-g~~LASa 242 (588)
T 2j04_A 166 PEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-DYKVVLT 242 (588)
T ss_dssp CCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-TTEEEEE
T ss_pred ccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-CCEEEEE
Confidence 35666 6788899999999998 88999999999999998773 34563 45566655 44 7899988
Q ss_pred cCCcEEEEEcCCCceeeee-CCCCCEEEEEE--eCC--EEEEEcCCCeEEEEEcCC-----CCc--------------cc
Q 021744 208 VTNFVKAWNTQTNTDLSLS-GPVGQVYAMAV--GND--LLFAGTQDGAILAWKFNV-----TTN--------------CF 263 (308)
Q Consensus 208 ~d~~i~~wd~~~~~~~~~~-~~~~~v~~~~~--~~~--~l~~g~~dg~i~iwd~~~-----~~~--------------~~ 263 (308)
++++|++||+.+++...+. +|...+.+++| +|+ .++++++||+ ++|.... ... ..
T Consensus 243 ~~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g 321 (588)
T 2j04_A 243 CPGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIW 321 (588)
T ss_dssp CSSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTT
T ss_pred eCCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCC
Confidence 8999999999999885433 89999999999 999 8999999999 9998732 100 00
Q ss_pred ccceeccccCCCeEE-EEecCCCeEEEee
Q 021744 264 EPAASLKVHTDSNRA-HFSRDVTSLLGSV 291 (308)
Q Consensus 264 ~~~~~~~~~~~~v~~-~~s~d~~~l~~s~ 291 (308)
..+..+.+ ...|.+ +|||||+.++++.
T Consensus 322 ~~l~~~~~-~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 322 NEFNNYET-TLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp TSSSSSCC-EEEEEEEEECTTSSEEEEEE
T ss_pred Cceeeecc-ceEEEEEEECCCCCEEEEEE
Confidence 11222222 445888 9999999988654
No 117
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=1.3e-28 Score=214.02 Aligned_cols=222 Identities=8% Similarity=-0.023 Sum_probs=159.7
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEec--------CCCe-eeccCCCcEEEEEC
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFAN--------NTWG-RNNNFNNHSNNYRA 94 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~--------~g~~-~s~~~d~~i~vwd~ 94 (308)
+.++|+++.|++||+||...+... ..+....+.||.+. +++|+| ++.+ |+|+.|++|||||+
T Consensus 101 ~~~las~~~d~~v~lw~~~~~~~~-------~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~ 173 (393)
T 4gq1_A 101 SLFLACVCQDNTVRLIITKNETII-------TQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRL 173 (393)
T ss_dssp EEEEEEEETTSCEEEEEEETTEEE-------EEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEE
T ss_pred CCEEEEEeCCCcEEEEECCCCccc-------eeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEEC
Confidence 457999999999999998765110 01123456799988 899998 7888 99999999999999
Q ss_pred CCCCCcccccceeeeeeeeeeeecCCc--eEEeeCCCeEEEEEcCCCceeee-------------------------Eee
Q 021744 95 GNSKNSNINNRAVIKTDILCRNWVQGN--CMYGEKCKFLHSWTVGDGFKLLT-------------------------QLE 147 (308)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~d~~i~iwd~~~~~~~~~-------------------------~~~ 147 (308)
.++.... ....|...+..++|+|++. +++++.|+.|++||+.++. ... ...
T Consensus 174 ~~~~~~~-~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 251 (393)
T 4gq1_A 174 TDEGPIL-AGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNL-SAEENSQTELVKNPWLLTLNTLPLVNTCHSS 251 (393)
T ss_dssp ETTEEEE-EEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-----------CSCCCSEEEESGGGC------
T ss_pred CCCceee-eecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCc-ccccccccCCcccceEEecccccceeeeecc
Confidence 7664432 3445666789999999873 4899999999999998763 211 124
Q ss_pred CcccceEEEEEe-CCCCEEEEeeCCCcEEEEeCCCCeEEEEEe-CCCe-------------------eEEE-Ec--CCCE
Q 021744 148 GHQKVVSGITLP-SGSDKLYSGSKDETVRVWDCASGQCAGVIN-LGGE-------------------VGCM-IS--EGPW 203 (308)
Q Consensus 148 ~h~~~v~~~~~~-~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-~~~~-------------------v~~~-~~--~~~~ 203 (308)
+|...+.++.|. ++++.+++++.|+++++||+.+++....+. +... +.+. ++ ++.+
T Consensus 252 ~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (393)
T 4gq1_A 252 GIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYF 331 (393)
T ss_dssp CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEE
T ss_pred cccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEE
Confidence 678889999987 799999999999999999999876655543 1111 1111 22 2335
Q ss_pred EEEEc-CCcEEEEEcCCCcee-eeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcC
Q 021744 204 IFIGV-TNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFN 257 (308)
Q Consensus 204 l~~~~-d~~i~~wd~~~~~~~-~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~ 257 (308)
+++|+ |+.|++||+.+++.. ....|..+|++++|+|+ +||+++.+| +.+|.+.
T Consensus 332 ~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 332 ATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp EEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred EEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 55676 999999999998877 67788899999999999 899988765 6666654
No 118
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=1e-26 Score=204.13 Aligned_cols=261 Identities=8% Similarity=0.006 Sum_probs=198.2
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcc
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSN 101 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~ 101 (308)
.+.++++++.|++|++||..++.. . ...+ .....+|... +++|+|++.. ++++.|++|++||+++++...
T Consensus 133 ~~~~~~~~~~~~~i~~~d~~~g~~-----~-~~~~-~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~ 205 (433)
T 3bws_A 133 NTRLAIPLLEDEGMDVLDINSGQT-----V-RLSP-PEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKA 205 (433)
T ss_dssp SSEEEEEBTTSSSEEEEETTTCCE-----E-EECC-CHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEE
T ss_pred CCeEEEEeCCCCeEEEEECCCCeE-----e-eecC-cccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEE
Confidence 456788888999999999887621 0 0000 1123456555 7899999999 999999999999998775542
Q ss_pred cccceeeeeeeeeeeecCCce--EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEee--------CC
Q 021744 102 INNRAVIKTDILCRNWVQGNC--MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGS--------KD 171 (308)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~--~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s--------~d 171 (308)
....+...+..+.|++++.. ++++.|+.|++||+.++ +.+..+..+ ..+.+++|+|+++++++++ .|
T Consensus 206 -~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~-~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~d 282 (433)
T 3bws_A 206 -TVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK-LEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGG 282 (433)
T ss_dssp -EEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT-EEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCC
T ss_pred -EEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC-cEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCC
Confidence 22244556888999999965 45558999999999988 677777654 5689999999999998888 58
Q ss_pred CcEEEEeCCCCeEEEEEeCCCeeEEE--EcCCCEEE-EEc-CCcEEEEEcCCCceeeeeCCCCCEEEEEEeCC--EEEEE
Q 021744 172 ETVRVWDCASGQCAGVINLGGEVGCM--ISEGPWIF-IGV-TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LLFAG 245 (308)
Q Consensus 172 g~v~~wd~~~~~~~~~~~~~~~v~~~--~~~~~~l~-~~~-d~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~--~l~~g 245 (308)
+.|++||+++++.+..+.+...+..+ .++++.++ ++. ++.|++||+.+++......+...+.+++|+|+ +++++
T Consensus 283 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 362 (433)
T 3bws_A 283 GRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVS 362 (433)
T ss_dssp EEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEE
T ss_pred CeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEE
Confidence 89999999999988887655455444 57787665 545 89999999999888744457788999999999 67766
Q ss_pred cC---------------CCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee--ceEEEEeec
Q 021744 246 TQ---------------DGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV--SFIMFIGQN 300 (308)
Q Consensus 246 ~~---------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~--s~~i~~~~~ 300 (308)
+. ||.|++||+.++ +.+..+..+ ..+.. +|+|++++|++++ +..|.++.-
T Consensus 363 ~~~~~~~~~~~~~~g~~dg~v~~~d~~~~----~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~ 430 (433)
T 3bws_A 363 CRGPNHPTEGYLKKGLVLGKVYVIDTTTD----TVKEFWEAG-NQPTGLDVSPDNRYLVISDFLDHQIRVYRR 430 (433)
T ss_dssp ECCCCCTTTCTTSCCSSCCEEEEEETTTT----EEEEEEECS-SSEEEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred ecCCCccccccccccccceEEEEEECCCC----cEEEEecCC-CCCceEEEcCCCCEEEEEECCCCeEEEEEe
Confidence 65 579999999886 666666654 46677 9999999988654 566666543
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=3.7e-27 Score=202.03 Aligned_cols=221 Identities=9% Similarity=0.059 Sum_probs=166.1
Q ss_pred ccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce--EEeeCCCeEEEEEcCC
Q 021744 64 ATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC--MYGEKCKFLHSWTVGD 138 (308)
Q Consensus 64 ~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~d~~i~iwd~~~ 138 (308)
..+|... +++|+|+|.+ ++|+.|+ +++||+++.+.... .+...+..+.+.+.+.. ++++.|+.|++||+.+
T Consensus 15 ~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~ 90 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMS---QEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVK 90 (355)
T ss_dssp ----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEE---EECSCCCEEEECTTSSEEEEECSSTTEEEEEETTT
T ss_pred cccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeee---eecCCeEEEEEcCCCCEEEEEECCccEEEEEECCC
Confidence 3566666 8999999999 7777664 89999876543311 11123566667766654 6788899999999999
Q ss_pred CceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCC-eEEEEEeCCCeeEEEEcCCCEEEE--Ec-CCcEEE
Q 021744 139 GFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG-QCAGVINLGGEVGCMISEGPWIFI--GV-TNFVKA 214 (308)
Q Consensus 139 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~-~~~~~~~~~~~v~~~~~~~~~l~~--~~-d~~i~~ 214 (308)
+ +.+..+. |...|.+++++++. ++.+ .|+.|++||+.++ +.+..+.....+.++.+ .+++. |. ++.|++
T Consensus 91 ~-~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~--~~la~~sg~~~g~v~i 163 (355)
T 3vu4_A 91 K-QDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIRFGGVCEFSN--GLLVYSNEFNLGQIHI 163 (355)
T ss_dssp T-EEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEEEEEEEEEET--TEEEEEESSCTTCEEE
T ss_pred C-cEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEeccCCceEEEEc--cEEEEeCCCcCcEEEE
Confidence 9 7788877 67799999998763 4433 4789999999988 66655554222334445 66665 44 899999
Q ss_pred EEcCCCc-----------------eeeeeCCCCCEEEEEEeCC--EEEEEcCCCe-EEEEEcCCCCcccccceecc-c-c
Q 021744 215 WNTQTNT-----------------DLSLSGPVGQVYAMAVGND--LLFAGTQDGA-ILAWKFNVTTNCFEPAASLK-V-H 272 (308)
Q Consensus 215 wd~~~~~-----------------~~~~~~~~~~v~~~~~~~~--~l~~g~~dg~-i~iwd~~~~~~~~~~~~~~~-~-~ 272 (308)
||+++++ ...+.+|...|++++|+|+ +|++|+.|++ |++||++++ +++..+. + |
T Consensus 164 wd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~----~~~~~~~~g~h 239 (355)
T 3vu4_A 164 TKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG----VLVREFRRGLD 239 (355)
T ss_dssp EECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC----CEEEEEECTTC
T ss_pred EECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC----cEEEEEEcCCC
Confidence 9999865 4578899999999999999 9999999998 999999987 7778887 5 9
Q ss_pred CCCeEE-EEecCCCeEEEee-ceEEEEee
Q 021744 273 TDSNRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 273 ~~~v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
...|.+ +|+|++++|++++ +..+.++.
T Consensus 240 ~~~v~~~~~s~~~~~l~s~s~d~~v~iw~ 268 (355)
T 3vu4_A 240 RADVVDMKWSTDGSKLAVVSDKWTLHVFE 268 (355)
T ss_dssp CSCEEEEEECTTSCEEEEEETTCEEEEEE
T ss_pred CCcEEEEEECCCCCEEEEEECCCEEEEEE
Confidence 999999 9999999998665 55555554
No 120
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=1.1e-26 Score=199.13 Aligned_cols=241 Identities=7% Similarity=-0.024 Sum_probs=170.5
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc-eeEEecCCCe--eeccCCCcEEEEECCCCCCccc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA-AKRFANNTWG--RNNNFNNHSNNYRAGNSKNSNI 102 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~-~i~~s~~g~~--~s~~~d~~i~vwd~~~~~~~~~ 102 (308)
+.+||+|+.|+ +++|+...... .. .. .+.+. .+++.++++. ++++.|++|++||+.+++.+.
T Consensus 31 g~~la~g~~~~-~~iw~~~~~~~---~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~- 95 (355)
T 3vu4_A 31 QSCLILSTLKS-FEIYNVHPVAH---IM-SQ---------EMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVS- 95 (355)
T ss_dssp SSEEEEECSSE-EEEEEETTEEE---EE-EE---------ECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEE-
T ss_pred CCEEEEEcCCE-EEEEecCCcce---ee-ee---------ecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEE-
Confidence 56788887664 78999776510 00 00 00112 5788888887 678889999999998887653
Q ss_pred ccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEE--eeCCCcEEEEeCC
Q 021744 103 NNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYS--GSKDETVRVWDCA 180 (308)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s--~s~dg~v~~wd~~ 180 (308)
...+...+..+.++++...+ ..|+.|++||+.+..+.+..+.. +...+++++ .+++. |+.||.|++||++
T Consensus 96 -~~~~~~~v~~v~~~~~~~~~--~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~ 167 (355)
T 3vu4_A 96 -RIKVDAPVKDLFLSREFIVV--SYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQ 167 (355)
T ss_dssp -EEECSSCEEEEEECSSEEEE--EETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECC
T ss_pred -EEECCCceEEEEEcCCEEEE--EEcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECC
Confidence 22345567888887764333 35789999999876334555543 444566676 55555 6899999999999
Q ss_pred CCe---------------E-EEEEe-CCCeeEEE--EcCCCEEEEEc-CCc-EEEEEcCCCcee-eee-C-CCCCEEEEE
Q 021744 181 SGQ---------------C-AGVIN-LGGEVGCM--ISEGPWIFIGV-TNF-VKAWNTQTNTDL-SLS-G-PVGQVYAMA 236 (308)
Q Consensus 181 ~~~---------------~-~~~~~-~~~~v~~~--~~~~~~l~~~~-d~~-i~~wd~~~~~~~-~~~-~-~~~~v~~~~ 236 (308)
+++ + +..+. |...+.++ .+++++|++++ |++ |++||+++++.+ .+. + |...|++++
T Consensus 168 ~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~ 247 (355)
T 3vu4_A 168 SSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMK 247 (355)
T ss_dssp C------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEE
T ss_pred CCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEE
Confidence 865 1 45555 77888876 47899999877 998 999999999887 666 5 999999999
Q ss_pred EeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccc---------------------cCCCeEE-EEecCCCeEEEee
Q 021744 237 VGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKV---------------------HTDSNRA-HFSRDVTSLLGSV 291 (308)
Q Consensus 237 ~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~---------------------~~~~v~~-~~s~d~~~l~~s~ 291 (308)
|+|+ +|++++.|+.|++||++.... .....+.. +...... +|++|++++++.+
T Consensus 248 ~s~~~~~l~s~s~d~~v~iw~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~ 324 (355)
T 3vu4_A 248 WSTDGSKLAVVSDKWTLHVFEIFNDQD--NKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWP 324 (355)
T ss_dssp ECTTSCEEEEEETTCEEEEEESSCCSC--CCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEET
T ss_pred ECCCCCEEEEEECCCEEEEEEccCCCC--cccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEe
Confidence 9999 999999999999999986532 11111111 1112245 9999998888665
No 121
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6.2e-28 Score=226.12 Aligned_cols=223 Identities=11% Similarity=0.084 Sum_probs=179.5
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecC--CCe-eeccCCCcEEEEECCCCCC-
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANN--TWG-RNNNFNNHSNNYRAGNSKN- 99 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~--g~~-~s~~~d~~i~vwd~~~~~~- 99 (308)
+.++++++.|++|++|+..... ......+.+|... +++|+|+ +.+ ++|+.|++|++||+.+++.
T Consensus 21 g~~latg~~dg~I~vwd~~~~~----------~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~ 90 (753)
T 3jro_A 21 GKRLATCSSDKTIKIFEVEGET----------HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWS 90 (753)
T ss_dssp SCCEEEEETTTEEEEEEEETTE----------EEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEE
T ss_pred CCeEEEEECCCcEEEEecCCCC----------CccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccc
Confidence 5689999999999999987430 1112234577766 8999988 888 9999999999999987642
Q ss_pred cccccceeeeeeeeeeeecC--Cce-EEeeCCCeEEEEEcCCCc-eeeeEeeCcccceEEEEEeC-------------CC
Q 021744 100 SNINNRAVIKTDILCRNWVQ--GNC-MYGEKCKFLHSWTVGDGF-KLLTQLEGHQKVVSGITLPS-------------GS 162 (308)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~--~~~-~~g~~d~~i~iwd~~~~~-~~~~~~~~h~~~v~~~~~~~-------------~~ 162 (308)
.......|...+.++.|+|+ +.. ++|+.|+.|++||+.+.. .....+.+|...|.+++|+| ++
T Consensus 91 ~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~ 170 (753)
T 3jro_A 91 QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKES 170 (753)
T ss_dssp EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGG
T ss_pred ccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCC
Confidence 11233556777999999998 755 899999999999998762 33556778999999999999 58
Q ss_pred CEEEEeeCCCcEEEEeCCCC----eEEEEEe-CCCeeEEE--EcC---CCEEEEEc-CCcEEEEEcCCCce------eee
Q 021744 163 DKLYSGSKDETVRVWDCASG----QCAGVIN-LGGEVGCM--ISE---GPWIFIGV-TNFVKAWNTQTNTD------LSL 225 (308)
Q Consensus 163 ~~l~s~s~dg~v~~wd~~~~----~~~~~~~-~~~~v~~~--~~~---~~~l~~~~-d~~i~~wd~~~~~~------~~~ 225 (308)
.++++|+.||+|++||++++ ..+..+. |...+.++ .|+ ++++++++ |+.|++||+++++. ...
T Consensus 171 ~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~ 250 (753)
T 3jro_A 171 RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKE 250 (753)
T ss_dssp CCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSS
T ss_pred CEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEecc
Confidence 99999999999999999876 4445555 67778776 466 78888776 99999999998742 244
Q ss_pred eCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCC
Q 021744 226 SGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNV 258 (308)
Q Consensus 226 ~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~ 258 (308)
..|...|++++|+|+ ++++++.||.|++|++..
T Consensus 251 ~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 251 EKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred CCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 568889999999999 899999999999999884
No 122
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.5e-27 Score=223.69 Aligned_cols=188 Identities=11% Similarity=0.017 Sum_probs=155.4
Q ss_pred ccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCc-eEEeeCCCeEEEEEcCCCce
Q 021744 66 ANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGN-CMYGEKCKFLHSWTVGDGFK 141 (308)
Q Consensus 66 gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~d~~i~iwd~~~~~~ 141 (308)
||... +++|+|++.+ |+|+.|++|+||+....+... ...|...+..+.|++ +. +++++.|+.|++||+.++ +
T Consensus 15 gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~--~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~-~ 90 (902)
T 2oaj_A 15 GMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVI--KLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQ-K 90 (902)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEE--ECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTC-S
T ss_pred CCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEE--EcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCC-c
Confidence 66666 8999999999 999999999999987654432 223556699999999 66 599999999999999998 6
Q ss_pred eeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEE-EE----------e-CCCeeEEE--EcC-CCEEEE
Q 021744 142 LLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAG-VI----------N-LGGEVGCM--ISE-GPWIFI 206 (308)
Q Consensus 142 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~-~~----------~-~~~~v~~~--~~~-~~~l~~ 206 (308)
.+..+. |...|++++|+|++++|++|+.||+|++||+++++... .+ . |...+.++ .|+ +..+++
T Consensus 91 ~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~ 169 (902)
T 2oaj_A 91 VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLI 169 (902)
T ss_dssp EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEE
T ss_pred EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEE
Confidence 777776 77899999999999999999999999999999887641 11 1 45567666 354 356777
Q ss_pred Ec-CCcEEEEEcCCCcee-eeeCC------------------CCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCC
Q 021744 207 GV-TNFVKAWNTQTNTDL-SLSGP------------------VGQVYAMAVGND--LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 207 ~~-d~~i~~wd~~~~~~~-~~~~~------------------~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~ 259 (308)
|+ |+.| +||+++++.. .+..| ...|++++|+|+ +|++++.||.|++||++++
T Consensus 170 g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g 243 (902)
T 2oaj_A 170 SYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSG 243 (902)
T ss_dssp ECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTC
T ss_pred EeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Confidence 76 8999 9999998876 55444 477999999999 9999999999999999886
No 123
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.2e-26 Score=203.36 Aligned_cols=223 Identities=13% Similarity=0.045 Sum_probs=174.8
Q ss_pred eeEEecCCCeeeccCCCcEEEEECCCCC---Cccccc-------------------------------------------
Q 021744 71 AKRFANNTWGRNNNFNNHSNNYRAGNSK---NSNINN------------------------------------------- 104 (308)
Q Consensus 71 ~i~~s~~g~~~s~~~d~~i~vwd~~~~~---~~~~~~------------------------------------------- 104 (308)
+++|+|+|+++.++.++.|++||+.+++ .+....
T Consensus 9 ~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (450)
T 2vdu_B 9 NLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIKRTA 88 (450)
T ss_dssp EEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC----------------------------------------
T ss_pred EEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccccccC
Confidence 6899999999445568899999998776 221110
Q ss_pred ----------ceeeeeeeeeeeecCCce--EEeeCCCeEEEEEcC--CCceeeeEee--CcccceEEEEEeCCCCEEEEe
Q 021744 105 ----------RAVIKTDILCRNWVQGNC--MYGEKCKFLHSWTVG--DGFKLLTQLE--GHQKVVSGITLPSGSDKLYSG 168 (308)
Q Consensus 105 ----------~~~~~~~~~~~~~~~~~~--~~g~~d~~i~iwd~~--~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~ 168 (308)
..+...+.++.|+|++.. ++++.|+.|++||+. ++ +.+..+. .|...|.+++|+|++++|+++
T Consensus 89 ~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~-~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~ 167 (450)
T 2vdu_B 89 AKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSK-NVLKLRKRFCFSKRPNAISIAEDDTTVIIA 167 (450)
T ss_dssp -----------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSS-SCEEEEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred ccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCC-ceeeeeecccCCCCceEEEEcCCCCEEEEE
Confidence 012225889999999966 678899999999998 66 6677765 567899999999999999999
Q ss_pred eCCCcEEEEeCCCCeEEE----EEe-CCCeeEEE--EcC---CCEEEEEc-CCcEEEEEcCCCcee-e-eeCCCCCEEEE
Q 021744 169 SKDETVRVWDCASGQCAG----VIN-LGGEVGCM--ISE---GPWIFIGV-TNFVKAWNTQTNTDL-S-LSGPVGQVYAM 235 (308)
Q Consensus 169 s~dg~v~~wd~~~~~~~~----~~~-~~~~v~~~--~~~---~~~l~~~~-d~~i~~wd~~~~~~~-~-~~~~~~~v~~~ 235 (308)
+.|+.|++|++.+++... .+. +...+.++ .++ +++|++++ |+.|++||+++++.. . +.+|...|.++
T Consensus 168 ~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~ 247 (450)
T 2vdu_B 168 DKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSI 247 (450)
T ss_dssp ETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEE
T ss_pred eCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEE
Confidence 999999999998876543 333 67777766 577 77888776 999999999998876 4 56899999999
Q ss_pred EEeCC--EEEEEcCCCeEEEEEcCCCCcccccceecc-------------------------ccCCCeEE-EEecCCCeE
Q 021744 236 AVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLK-------------------------VHTDSNRA-HFSRDVTSL 287 (308)
Q Consensus 236 ~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~-------------------------~~~~~v~~-~~s~d~~~l 287 (308)
+|+ + +|++++.|+.|++||+.++ +++..+. .....+.. +|+|++++|
T Consensus 248 ~~s-d~~~l~s~~~d~~v~vwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 322 (450)
T 2vdu_B 248 CCG-KDYLLLSAGGDDKIFAWDWKTG----KNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFV 322 (450)
T ss_dssp EEC-STTEEEEEESSSEEEEEETTTC----CEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEE
T ss_pred EEC-CCCEEEEEeCCCeEEEEECCCC----cEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEE
Confidence 999 7 9999999999999999987 4444443 22346777 999999999
Q ss_pred EEee--ceEEEEee
Q 021744 288 LGSV--SFIMFIGQ 299 (308)
Q Consensus 288 ~~s~--s~~i~~~~ 299 (308)
++++ +..|.++.
T Consensus 323 ~~~~~~d~~i~iw~ 336 (450)
T 2vdu_B 323 AFFVEATKCIIILE 336 (450)
T ss_dssp EEEETTCSEEEEEE
T ss_pred EEEECCCCeEEEEE
Confidence 8665 44444443
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=1e-25 Score=197.75 Aligned_cols=215 Identities=13% Similarity=0.068 Sum_probs=176.2
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCCCccc----ccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeee
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNI----NNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLT 144 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~ 144 (308)
+++|+|++.+ ++++.|++|++||+.+++.... ....|...+..+.+.+++.. ++++.|+.|++||++++ +.+.
T Consensus 127 ~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~-~~~~ 205 (433)
T 3bws_A 127 SVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL-AYKA 205 (433)
T ss_dssp CCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC-CEEE
T ss_pred EEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc-eEEE
Confidence 6899997777 8888999999999988765432 12345566888999888876 78889999999999988 7888
Q ss_pred EeeCcccceEEEEEeCCCCEEE-EeeCCCcEEEEeCCCCeEEEEEeCCCeeEEE--EcCCCEEEEEc---------CCcE
Q 021744 145 QLEGHQKVVSGITLPSGSDKLY-SGSKDETVRVWDCASGQCAGVINLGGEVGCM--ISEGPWIFIGV---------TNFV 212 (308)
Q Consensus 145 ~~~~h~~~v~~~~~~~~~~~l~-s~s~dg~v~~wd~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~---------d~~i 212 (308)
.+..|...+.+++|+|+++.++ +++.|+.|++||+++++.+..+.....+.++ .+++++++++. |+.|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i 285 (433)
T 3bws_A 206 TVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRL 285 (433)
T ss_dssp EEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEE
T ss_pred EEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeE
Confidence 8888999999999999998874 5558999999999999998888866666655 47888887654 6799
Q ss_pred EEEEcCCCceeeeeCCCCCEEEEEEeCC---EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEE
Q 021744 213 KAWNTQTNTDLSLSGPVGQVYAMAVGND---LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLL 288 (308)
Q Consensus 213 ~~wd~~~~~~~~~~~~~~~v~~~~~~~~---~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~ 288 (308)
++||+++++......+...+.+++|+|+ ++++++.|+.|++||+.++ +.+..+. +...+.. +|+|++++|+
T Consensus 286 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~----~~~~~~~-~~~~~~~~~~s~dg~~l~ 360 (433)
T 3bws_A 286 GIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK----KVQKSIP-VFDKPNTIALSPDGKYLY 360 (433)
T ss_dssp EEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTT----EEEEEEE-CSSSEEEEEECTTSSEEE
T ss_pred EEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCC----cEEEEec-CCCCCCeEEEcCCCCEEE
Confidence 9999999988755566678999999998 5677799999999999976 5555554 5666777 9999999888
Q ss_pred Eee
Q 021744 289 GSV 291 (308)
Q Consensus 289 ~s~ 291 (308)
++.
T Consensus 361 ~~~ 363 (433)
T 3bws_A 361 VSC 363 (433)
T ss_dssp EEE
T ss_pred EEe
Confidence 655
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=1.3e-24 Score=188.05 Aligned_cols=227 Identities=11% Similarity=0.066 Sum_probs=174.5
Q ss_pred CceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc-eeEEecCCCe--eeccCCCcEEEEECCCCCCcccc
Q 021744 27 GLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA-AKRFANNTWG--RNNNFNNHSNNYRAGNSKNSNIN 103 (308)
Q Consensus 27 ~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~-~i~~s~~g~~--~s~~~d~~i~vwd~~~~~~~~~~ 103 (308)
.++++++.|++|++||..+++ ... ....+... +++|+|++++ ++++.|++|++||+.+++...
T Consensus 45 ~l~~~~~~d~~i~v~d~~~~~-----------~~~-~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~-- 110 (391)
T 1l0q_A 45 KVYVANAHSNDVSIIDTATNN-----------VIA-TVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAG-- 110 (391)
T ss_dssp EEEEEEGGGTEEEEEETTTTE-----------EEE-EEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE--
T ss_pred EEEEECCCCCeEEEEECCCCe-----------EEE-EEECCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEE--
Confidence 345888899999999988761 111 11122223 7999999997 566678999999998876542
Q ss_pred cceeeeeeeeeeeecCCce--EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEE-EEeeCCCcEEEEeCC
Q 021744 104 NRAVIKTDILCRNWVQGNC--MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKL-YSGSKDETVRVWDCA 180 (308)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~--~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~dg~v~~wd~~ 180 (308)
...+...+..+.|++++.. ++++.++.|++||+.++ +.+..+..| ..+.+++|+|+++++ ++++.++.|++||++
T Consensus 111 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~-~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~ 188 (391)
T 1l0q_A 111 TVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTK-AVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTV 188 (391)
T ss_dssp EEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT-EEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred EEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC-cEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 2223345788899999964 57788999999999998 777777765 456999999999887 677889999999999
Q ss_pred CCeEEEEEeCCCeeEEE--EcCCCEEEEE----cCCcEEEEEcCCCcee-eeeCCCCCEEEEEEeCC--EE-EEEcCCCe
Q 021744 181 SGQCAGVINLGGEVGCM--ISEGPWIFIG----VTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LL-FAGTQDGA 250 (308)
Q Consensus 181 ~~~~~~~~~~~~~v~~~--~~~~~~l~~~----~d~~i~~wd~~~~~~~-~~~~~~~~v~~~~~~~~--~l-~~g~~dg~ 250 (308)
+++.+..+.+...+.++ .+++++++++ .++.|++||+++++.+ .+..+ ..+.+++|+|+ ++ ++++.|+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~s~~~d~~ 267 (391)
T 1l0q_A 189 TNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGKKVYVALSFXNT 267 (391)
T ss_dssp TTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTE
T ss_pred CCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecC-CCccEEEEccCCCEEEEEcCCCCE
Confidence 99999888877766655 4788888765 4789999999999877 55554 45889999998 45 67789999
Q ss_pred EEEEEcCCCCcccccceeccccCC
Q 021744 251 ILAWKFNVTTNCFEPAASLKVHTD 274 (308)
Q Consensus 251 i~iwd~~~~~~~~~~~~~~~~~~~ 274 (308)
|++||+.++ +.+..+..+..
T Consensus 268 v~v~d~~~~----~~~~~~~~~~~ 287 (391)
T 1l0q_A 268 VSVIDTATN----TITATMAVGKN 287 (391)
T ss_dssp EEEEETTTT----EEEEEEECSSS
T ss_pred EEEEECCCC----cEEEEEECCcC
Confidence 999999986 55555554433
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.94 E-value=2.1e-24 Score=179.46 Aligned_cols=168 Identities=15% Similarity=0.129 Sum_probs=131.4
Q ss_pred CCCeEEEEEcCC-CceeeeEeeCcccceEEEEEeC---CCCEEEEeeCCCcEEEEeCCCCeEEEEEe-CCC---eeE--E
Q 021744 127 KCKFLHSWTVGD-GFKLLTQLEGHQKVVSGITLPS---GSDKLYSGSKDETVRVWDCASGQCAGVIN-LGG---EVG--C 196 (308)
Q Consensus 127 ~d~~i~iwd~~~-~~~~~~~~~~h~~~v~~~~~~~---~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-~~~---~v~--~ 196 (308)
.|+.|++|++.. + +.+..+.+|...+..++|+| ++..|++++.|++|++||+++++++.++. +.. .+. .
T Consensus 155 ~d~~V~~~~~s~dG-~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~va 233 (356)
T 2w18_A 155 SDQQVEVMTFAEDG-GGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKA 233 (356)
T ss_dssp TTCEEEEEEECTTS-CEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEE
T ss_pred CCCcEEEEEECCCC-ceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEE
Confidence 489999999954 5 67788888999999999998 67999999999999999999999999997 322 232 3
Q ss_pred EEcCCCEE------------EEEc-CCcEEEEEcCCCcee-ee-----eCCCCCEEEEEEeCCEEEEEcCCCeEEEEEcC
Q 021744 197 MISEGPWI------------FIGV-TNFVKAWNTQTNTDL-SL-----SGPVGQVYAMAVGNDLLFAGTQDGAILAWKFN 257 (308)
Q Consensus 197 ~~~~~~~l------------~~~~-d~~i~~wd~~~~~~~-~~-----~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~ 257 (308)
++|+++++ ++|+ |++|++||..+++.+ .+ .+|...+.+..++..++++++.|++|+|||+.
T Consensus 234 fSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~ 313 (356)
T 2w18_A 234 YSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLL 313 (356)
T ss_dssp EEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETT
T ss_pred ECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECC
Confidence 46777766 3455 889999999999876 22 36766666666664489999999999999999
Q ss_pred CCCcccccceeccccCCC-eEE-EEecCCCeEEEee-ceEEEEee
Q 021744 258 VTTNCFEPAASLKVHTDS-NRA-HFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~-v~~-~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
++ +.+.++.+|... +.+ +|+|||++|++++ +..|+++.
T Consensus 314 tG----k~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 314 LG----QCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp TC----SEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred CC----cEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEec
Confidence 98 788899988775 445 9999999998665 77777664
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=1.3e-23 Score=183.62 Aligned_cols=256 Identities=11% Similarity=-0.021 Sum_probs=181.2
Q ss_pred CCceEEec----CCC----eEEEeec--CCCCCCCCCcccccCCCCCCccccccc--eeEEec--------------CCC
Q 021744 26 GGLSTADT----RQK----VCNYWRA--GKCNRFPCPYLHRELPLPPAATANGAA--AKRFAN--------------NTW 79 (308)
Q Consensus 26 ~~~~~s~s----~d~----~i~~W~~--~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~--------------~g~ 79 (308)
..++++|+ .|+ ++++||. .+++. + ....+.+|... .+++++ .+.
T Consensus 75 ~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~ 144 (415)
T 2hqs_A 75 IDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTV-----L-----AQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRT 144 (415)
T ss_dssp CCEEEEEEEEECTTSCEEEEEEEEECSSSTTCE-----E-----EEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTC
T ss_pred CCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCE-----E-----eeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCC
Confidence 45677776 467 9999999 77610 0 01223445444 344443 144
Q ss_pred e-eeccCC------CcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCCC---eEEEEEcCCCceeeeEeeC
Q 021744 80 G-RNNNFN------NHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKCK---FLHSWTVGDGFKLLTQLEG 148 (308)
Q Consensus 80 ~-~s~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~---~i~iwd~~~~~~~~~~~~~ 148 (308)
. +.++.+ ++|++||++.... .....|...+..+.|+|++.. ++++.++ .|++||+.++ +. ..+..
T Consensus 145 ~l~~~s~~~~~~~~~~i~i~d~~g~~~--~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg-~~-~~l~~ 220 (415)
T 2hqs_A 145 RIAYVVQTNGGQFPYELRVSDYDGYNQ--FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANG-AV-RQVAS 220 (415)
T ss_dssp EEEEEEECSSSSCCEEEEEEETTSCSC--EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC-CE-EEEEC
T ss_pred EEEEEEecCCCCccceEEEEcCCCCCC--EEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCC-cE-EEeec
Confidence 4 444433 7999999975432 234456667999999999976 7777664 9999999988 44 35777
Q ss_pred cccceEEEEEeCCCCEEE-EeeCCCc--EEEEeCCCCeEEEEEeCCCeeEEE--EcCCCEEEEEc--CC--cEEEEEcCC
Q 021744 149 HQKVVSGITLPSGSDKLY-SGSKDET--VRVWDCASGQCAGVINLGGEVGCM--ISEGPWIFIGV--TN--FVKAWNTQT 219 (308)
Q Consensus 149 h~~~v~~~~~~~~~~~l~-s~s~dg~--v~~wd~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~--d~--~i~~wd~~~ 219 (308)
|...+.+++|+|++++|+ +++.++. |++||+++++......+...+.++ +|++++|+.++ ++ .|.+||+.+
T Consensus 221 ~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~ 300 (415)
T 2hqs_A 221 FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING 300 (415)
T ss_dssp CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS
T ss_pred CCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCC
Confidence 888999999999999877 7776665 999999988764433455555554 58899888654 34 788889998
Q ss_pred CceeeeeCCCCCEEEEEEeCC--EEEEEcCC---CeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee-c
Q 021744 220 NTDLSLSGPVGQVYAMAVGND--LLFAGTQD---GAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV-S 292 (308)
Q Consensus 220 ~~~~~~~~~~~~v~~~~~~~~--~l~~g~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-s 292 (308)
++...+..+...+.+++|+|+ +|++++.+ ..|++||+.++ +. ..+..+. .+.. +|+|||++|+.+. .
T Consensus 301 ~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~----~~-~~l~~~~-~~~~~~~spdg~~l~~~s~~ 374 (415)
T 2hqs_A 301 GAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG----GV-QVLSSTF-LDETPSLAPNGTMVIYSSSQ 374 (415)
T ss_dssp SCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTC----CE-EECCCSS-SCEEEEECTTSSEEEEEEEE
T ss_pred CCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCC----CE-EEecCCC-CcCCeEEcCCCCEEEEEEcC
Confidence 887766677788999999999 77766653 58999999986 32 3455554 6777 9999999888554 2
Q ss_pred ---eEEEEeecC
Q 021744 293 ---FIMFIGQNN 301 (308)
Q Consensus 293 ---~~i~~~~~~ 301 (308)
..||++...
T Consensus 375 ~~~~~l~~~d~~ 386 (415)
T 2hqs_A 375 GMGSVLNLVSTD 386 (415)
T ss_dssp TTEEEEEEEETT
T ss_pred CCccEEEEEECC
Confidence 267777643
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=1e-23 Score=184.26 Aligned_cols=236 Identities=10% Similarity=-0.022 Sum_probs=179.2
Q ss_pred CCceEEecCC------CeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCC---cEEEEE
Q 021744 26 GGLSTADTRQ------KVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNN---HSNNYR 93 (308)
Q Consensus 26 ~~~~~s~s~d------~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~---~i~vwd 93 (308)
+..++.++.+ ++|++||.... ....+.+|... +++|+|+|+. ++++.|+ +|++||
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~-------------~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d 209 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGY-------------NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQT 209 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSC-------------SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCC-------------CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEE
Confidence 4566666654 79999998754 12233455545 7999999999 8888875 999999
Q ss_pred CCCCCCcccccceeeeeeeeeeeecCCce-E-EeeCCC--eEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEee
Q 021744 94 AGNSKNSNINNRAVIKTDILCRNWVQGNC-M-YGEKCK--FLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGS 169 (308)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~g~~d~--~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s 169 (308)
+.+++.. ....+...+..+.|+|+|.. + +++.++ .|++||+.++ +. ..+..|...+.+++|+|++++|++++
T Consensus 210 ~~tg~~~--~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~-~~-~~l~~~~~~~~~~~~spdg~~l~~~s 285 (415)
T 2hqs_A 210 LANGAVR--QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASG-QI-RQVTDGRSNNTEPTWFPDSQNLAFTS 285 (415)
T ss_dssp TTTCCEE--EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC-CE-EECCCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCcEE--EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCC-CE-EeCcCCCCcccceEECCCCCEEEEEE
Confidence 9887653 33445556889999999975 4 555554 4999999887 33 56778889999999999999988887
Q ss_pred C-CC--cEEEEeCCCCeEEEEEeCCCeeEE--EEcCCCEEEEEc-C---CcEEEEEcCCCceeeeeCCCCCEEEEEEeCC
Q 021744 170 K-DE--TVRVWDCASGQCAGVINLGGEVGC--MISEGPWIFIGV-T---NFVKAWNTQTNTDLSLSGPVGQVYAMAVGND 240 (308)
Q Consensus 170 ~-dg--~v~~wd~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~-d---~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~ 240 (308)
. ++ .|.+||+.+++......+...+.. +++++++|+.+. + ..|.+||+.+++...+..+. .+.+++|+|+
T Consensus 286 ~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~-~~~~~~~spd 364 (415)
T 2hqs_A 286 DQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF-LDETPSLAPN 364 (415)
T ss_dssp CTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSS-SCEEEEECTT
T ss_pred CCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCC-CcCCeEEcCC
Confidence 6 44 688889988775433334455544 358899988654 3 48999999999887666665 8999999999
Q ss_pred --EEEEEcCCC---eEEEEEcCCCCcccccceeccccCCCeEE-EEecCC
Q 021744 241 --LLFAGTQDG---AILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDV 284 (308)
Q Consensus 241 --~l~~g~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~ 284 (308)
+|++++.++ .|++||+.. .....+..|...|.. +|+|..
T Consensus 365 g~~l~~~s~~~~~~~l~~~d~~g-----~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 365 GTMVIYSSSQGMGSVLNLVSTDG-----RFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp SSEEEEEEEETTEEEEEEEETTS-----CCEEECCCSSSEEEEEEECCCC
T ss_pred CCEEEEEEcCCCccEEEEEECCC-----CcEEEeeCCCCCCcCCcccccc
Confidence 777777766 799999875 556778889999999 999964
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=1.3e-22 Score=182.81 Aligned_cols=262 Identities=9% Similarity=-0.053 Sum_probs=188.6
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCe-eeccCCCcEEEEEC--CCCCCccc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWG-RNNNFNNHSNNYRA--GNSKNSNI 102 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~-~s~~~d~~i~vwd~--~~~~~~~~ 102 (308)
+.++++++.|++|++||..++. .......++....++|+|+|++ ++++.|++|++||+ .+++.+..
T Consensus 149 ~~~~vs~~~d~~V~v~D~~t~~-----------~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~ 217 (543)
T 1nir_A 149 NLFSVTLRDAGQIALVDGDSKK-----------IVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAE 217 (543)
T ss_dssp GEEEEEEGGGTEEEEEETTTCC-----------EEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred CEEEEEEcCCCeEEEEECCCce-----------EEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEE
Confidence 5688999999999999988761 1111111333127899999999 99999999999999 66654321
Q ss_pred ccceeeeeeeeeeeec----CCce-EEee-CCCeEEEEEcCCCceeeeEeeC----------ccc-ceEEEEEeCCCC-E
Q 021744 103 NNRAVIKTDILCRNWV----QGNC-MYGE-KCKFLHSWTVGDGFKLLTQLEG----------HQK-VVSGITLPSGSD-K 164 (308)
Q Consensus 103 ~~~~~~~~~~~~~~~~----~~~~-~~g~-~d~~i~iwd~~~~~~~~~~~~~----------h~~-~v~~~~~~~~~~-~ 164 (308)
..+...+..+.|+| ++.. ++++ .++.|.+||..+. +.+..+.. |.. .+..+.++|++. +
T Consensus 218 --i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~-~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~ 294 (543)
T 1nir_A 218 --IKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL-EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEF 294 (543)
T ss_dssp --EECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTC-CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEE
T ss_pred --EecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccc-ccceeecccCcccCccccccCCceEEEEECCCCCEE
Confidence 22334478899999 8876 4555 5899999999998 77777764 223 788999999765 4
Q ss_pred EEEeeCCCcEEEEeCCCCeEEE--EEeCCCeeE--EEEcCCCEEEEE-c-CCcEEEEEcCCCcee-eeeC----CCCCEE
Q 021744 165 LYSGSKDETVRVWDCASGQCAG--VINLGGEVG--CMISEGPWIFIG-V-TNFVKAWNTQTNTDL-SLSG----PVGQVY 233 (308)
Q Consensus 165 l~s~s~dg~v~~wd~~~~~~~~--~~~~~~~v~--~~~~~~~~l~~~-~-d~~i~~wd~~~~~~~-~~~~----~~~~v~ 233 (308)
+++...+++|.+||+.+.+.+. .+.+...+. .+.+++++++++ . +++|.+||+.++++. .+.. |.....
T Consensus 295 ~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~ 374 (543)
T 1nir_A 295 IVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGA 374 (543)
T ss_dssp EEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCE
T ss_pred EEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCc
Confidence 6778889999999998866544 444433333 446889977754 4 889999999999887 4443 554444
Q ss_pred EEEEeCC---EEEEEc-CCCeEEEEEcCCCC---cccccceeccccCCCeEE-EEecCCCeEEEee----------ceEE
Q 021744 234 AMAVGND---LLFAGT-QDGAILAWKFNVTT---NCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV----------SFIM 295 (308)
Q Consensus 234 ~~~~~~~---~l~~g~-~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~----------s~~i 295 (308)
.+ ++|+ .++++. .|++|.+||+.+.. ..++.++++..|...+.. +|+|++++|.+.. ++.+
T Consensus 375 ~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v 453 (543)
T 1nir_A 375 NF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAV 453 (543)
T ss_dssp EE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEE
T ss_pred cc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEE
Confidence 44 4676 666665 68999999998721 113788899998887776 9999999999764 5555
Q ss_pred EEeecCc
Q 021744 296 FIGQNNK 302 (308)
Q Consensus 296 ~~~~~~~ 302 (308)
|-..+.+
T Consensus 454 ~d~~~~~ 460 (543)
T 1nir_A 454 FDLKNLD 460 (543)
T ss_dssp EETTCTT
T ss_pred EECCCCC
Confidence 5554444
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=9.6e-23 Score=168.82 Aligned_cols=242 Identities=8% Similarity=0.015 Sum_probs=168.5
Q ss_pred EecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCC-CCCcccccce
Q 021744 31 ADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGN-SKNSNINNRA 106 (308)
Q Consensus 31 s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~-~~~~~~~~~~ 106 (308)
+++.|++|++||..++ .. ..+..|... +++|+|+|++ ++++ ++.|++||+++ ++........
T Consensus 17 ~~~~~~~i~~~d~~~~-----------~~--~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~ 82 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTR-----------KM--RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGF 82 (297)
T ss_dssp -CCCCEEEEEEETTTT-----------EE--EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTT
T ss_pred CCCcceeEEEEeCCCC-----------ce--eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecccc
Confidence 3567899999998876 11 112234433 7999999999 6665 88999999988 6554322222
Q ss_pred eeeeeeeeeeecCCce-EEee--CCCeEEE--EEcCCCceeeeEeeCcccceEEEEEeCCCCEEE-EeeCCCcEEEEeC-
Q 021744 107 VIKTDILCRNWVQGNC-MYGE--KCKFLHS--WTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLY-SGSKDETVRVWDC- 179 (308)
Q Consensus 107 ~~~~~~~~~~~~~~~~-~~g~--~d~~i~i--wd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~dg~v~~wd~- 179 (308)
+...+..+.|+|++.. ++++ .++...| +++.++ + ...+..+ ..+..++|+|++++|+ +++.++.+++|++
T Consensus 83 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~-~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~ 159 (297)
T 2ojh_A 83 ATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGG-T-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMD 159 (297)
T ss_dssp CCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCC-C-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred ccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCC-c-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEE
Confidence 2345788999999976 5555 3344444 555554 2 4445444 3588999999999876 7889999999985
Q ss_pred -CCCeEEEEEeCCCeeEEE--EcCCCEEEE-Ec-CCcEEEEEcC--CCceeeeeCCCCCEEEEEEeCC--EEEEEcCC--
Q 021744 180 -ASGQCAGVINLGGEVGCM--ISEGPWIFI-GV-TNFVKAWNTQ--TNTDLSLSGPVGQVYAMAVGND--LLFAGTQD-- 248 (308)
Q Consensus 180 -~~~~~~~~~~~~~~v~~~--~~~~~~l~~-~~-d~~i~~wd~~--~~~~~~~~~~~~~v~~~~~~~~--~l~~g~~d-- 248 (308)
.+++......+...+.++ .+++++|+. +. ++.+++|++. .++...+..+...+.+++|+|+ +|++++.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 239 (297)
T 2ojh_A 160 IDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDAD 239 (297)
T ss_dssp TTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETT
T ss_pred CCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCC
Confidence 445443333355555554 578887774 43 7888888875 4444477777888999999999 77776655
Q ss_pred ---------CeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee
Q 021744 249 ---------GAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV 291 (308)
Q Consensus 249 ---------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~ 291 (308)
+.|++||+.+++. ..+..+..|...+.. +|+|++++|+.++
T Consensus 240 ~~~~~~~~~~~l~~~d~~~~~~--~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 290 (297)
T 2ojh_A 240 VFDHPRDLDVRVQLMDMDGGNV--ETLFDLFGGQGTMNSPNWSPDGDEFAYVR 290 (297)
T ss_dssp CCSCCSSEEEEEEEEETTSCSC--EEEEEEEESTTTSCSCCBCTTSSEEEEEE
T ss_pred CCcccccCceEEEEEecCCCCc--eeeeccCCCCcccccceECCCCCEEEEEE
Confidence 5699999988642 345555578888888 9999999888554
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=6.8e-22 Score=178.21 Aligned_cols=249 Identities=9% Similarity=0.001 Sum_probs=181.9
Q ss_pred CCCceEEecCCCeEEEeec--CCCCCCCCCcccccCCCCCCccccccc-eeEEec----CCCe-eecc-CCCcEEEEECC
Q 021744 25 GGGLSTADTRQKVCNYWRA--GKCNRFPCPYLHRELPLPPAATANGAA-AKRFAN----NTWG-RNNN-FNNHSNNYRAG 95 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~--~~~~~~~~~~~~~~~~~~~~~~gh~~~-~i~~s~----~g~~-~s~~-~d~~i~vwd~~ 95 (308)
.+.++++++.|++|++||. .++. .+ ..+..+... .++|+| +|++ ++++ .+++|.+||..
T Consensus 189 dg~~l~v~~~d~~V~v~D~~~~t~~-----~~-------~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~ 256 (543)
T 1nir_A 189 SGRYLLVIGRDARIDMIDLWAKEPT-----KV-------AEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE 256 (543)
T ss_dssp TSCEEEEEETTSEEEEEETTSSSCE-----EE-------EEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETT
T ss_pred CCCEEEEECCCCeEEEEECcCCCCc-----EE-------EEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecc
Confidence 4678999999999999999 5440 01 111122223 799999 9999 7776 58999999998
Q ss_pred CCCCcccccc-e--------eee-eeeeeeeecCCce--EEeeCCCeEEEEEcCCCceee-eEeeCcccceEEEEEeCCC
Q 021744 96 NSKNSNINNR-A--------VIK-TDILCRNWVQGNC--MYGEKCKFLHSWTVGDGFKLL-TQLEGHQKVVSGITLPSGS 162 (308)
Q Consensus 96 ~~~~~~~~~~-~--------~~~-~~~~~~~~~~~~~--~~g~~d~~i~iwd~~~~~~~~-~~~~~h~~~v~~~~~~~~~ 162 (308)
+.+.+..... . |.. .+..+.+++++.. ++...++.|.+||..+..... ..+. +...+..++|+|++
T Consensus 257 t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg 335 (543)
T 1nir_A 257 TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSH 335 (543)
T ss_dssp TCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTS
T ss_pred ccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCC
Confidence 8776533221 1 222 4677888887744 667789999999998763222 2333 56778899999999
Q ss_pred CEEEEe-eCCCcEEEEeCCCCeEEEEEe-----CCCeeEEE-EcC-CCEEEEEc--CCcEEEEEcCC-------Ccee-e
Q 021744 163 DKLYSG-SKDETVRVWDCASGQCAGVIN-----LGGEVGCM-ISE-GPWIFIGV--TNFVKAWNTQT-------NTDL-S 224 (308)
Q Consensus 163 ~~l~s~-s~dg~v~~wd~~~~~~~~~~~-----~~~~v~~~-~~~-~~~l~~~~--d~~i~~wd~~~-------~~~~-~ 224 (308)
++++++ ..+++|.+||+.+++++..+. |......+ .++ +.+++++. +++|.+||+.+ .+.+ +
T Consensus 336 ~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~ 415 (543)
T 1nir_A 336 RYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAE 415 (543)
T ss_dssp CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEE
T ss_pred CEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEE
Confidence 987655 568999999999999998887 22223333 466 55556653 78999999998 6666 7
Q ss_pred eeCCCCCEEEEEEeCC--EEEEEc-------CCCeEEEEEcCCCCcccccc-eec--------cccCCCeEE-EEecCCC
Q 021744 225 LSGPVGQVYAMAVGND--LLFAGT-------QDGAILAWKFNVTTNCFEPA-ASL--------KVHTDSNRA-HFSRDVT 285 (308)
Q Consensus 225 ~~~~~~~v~~~~~~~~--~l~~g~-------~dg~i~iwd~~~~~~~~~~~-~~~--------~~~~~~v~~-~~s~d~~ 285 (308)
+..|...+..++++|+ +|++++ .++.|.+||+.+.+ .. ..+ ..+...+.. .|+|||+
T Consensus 416 l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~ 491 (543)
T 1nir_A 416 LQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLD----AKYQVLPIAEWADLGEGAKRVVQPEYNKRGD 491 (543)
T ss_dssp EECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTT----SCCEEECHHHHHCCCSSCCEEEEEEECSSSS
T ss_pred EEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCC----CCeEEeechhhcccCCCCCceEeccCCCCCC
Confidence 8888888899999999 788776 27799999999874 33 222 355677888 9999999
Q ss_pred eEEEe
Q 021744 286 SLLGS 290 (308)
Q Consensus 286 ~l~~s 290 (308)
.|+.|
T Consensus 492 ~~~~s 496 (543)
T 1nir_A 492 EVWFS 496 (543)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99865
No 132
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=8e-22 Score=166.68 Aligned_cols=251 Identities=9% Similarity=-0.038 Sum_probs=178.0
Q ss_pred CceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccc--cc-eeEEecCCCe--eeccCCCcEEEEECCCCCCcc
Q 021744 27 GLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANG--AA-AKRFANNTWG--RNNNFNNHSNNYRAGNSKNSN 101 (308)
Q Consensus 27 ~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~--~~-~i~~s~~g~~--~s~~~d~~i~vwd~~~~~~~~ 101 (308)
.++++++.+++|++||..++.. ......++. .. .++|+|+|+. +++..++.|.+||+.+++...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~-----------~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~ 70 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAV-----------DKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLG 70 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEE-----------EEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcE-----------EEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEe
Confidence 3689999999999999887611 110011111 12 6899999976 677778999999998876543
Q ss_pred cccce----eeeeeeeeeeecCCce-EEee------------CCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCE
Q 021744 102 INNRA----VIKTDILCRNWVQGNC-MYGE------------KCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDK 164 (308)
Q Consensus 102 ~~~~~----~~~~~~~~~~~~~~~~-~~g~------------~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 164 (308)
..... +...+..+.+++++.. +++. .++.|.+||+.++ +.+..+.. ...+..++|+|++++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~-~~~~~~~~-~~~~~~~~~s~dg~~ 148 (337)
T 1pby_B 71 RIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETL-SRRKAFEA-PRQITMLAWARDGSK 148 (337)
T ss_dssp EEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTT-EEEEEEEC-CSSCCCEEECTTSSC
T ss_pred eEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCC-cEEEEEeC-CCCcceeEECCCCCE
Confidence 22211 2235677899999965 4443 5799999999988 66666664 456788999999998
Q ss_pred EEEeeCCCcEEEEeCCCCeEEEEEeCCC--eeEEEEcCCCEEEEEc--CC-----------------------cEEEEEc
Q 021744 165 LYSGSKDETVRVWDCASGQCAGVINLGG--EVGCMISEGPWIFIGV--TN-----------------------FVKAWNT 217 (308)
Q Consensus 165 l~s~s~dg~v~~wd~~~~~~~~~~~~~~--~v~~~~~~~~~l~~~~--d~-----------------------~i~~wd~ 217 (308)
|+++ ++.|.+||+.+++.+..+.... ....+.++++.+++.. ++ .|.+||+
T Consensus 149 l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 226 (337)
T 1pby_B 149 LYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDL 226 (337)
T ss_dssp EEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEET
T ss_pred EEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeC
Confidence 8877 6899999999999888777332 2224456666554332 22 4789999
Q ss_pred CCCcee--eeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee-
Q 021744 218 QTNTDL--SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV- 291 (308)
Q Consensus 218 ~~~~~~--~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~- 291 (308)
.+++.. .+..+...+.+++|+|+ +++++ ++.|++||+.++ +.+..+..+. .+.. +|+|||++|+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~----~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~ 299 (337)
T 1pby_B 227 ETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN----ASIKRVPLPH-SYYSVNVSTDGSTVWLGGA 299 (337)
T ss_dssp TTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT----EEEEEEECSS-CCCEEEECTTSCEEEEESB
T ss_pred CCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCC----cCcceecCCC-ceeeEEECCCCCEEEEEcC
Confidence 998775 44556678899999999 66666 799999999886 5555555443 3455 9999999887554
Q ss_pred ceEEEEee
Q 021744 292 SFIMFIGQ 299 (308)
Q Consensus 292 s~~i~~~~ 299 (308)
+..|.++.
T Consensus 300 ~~~i~v~d 307 (337)
T 1pby_B 300 LGDLAAYD 307 (337)
T ss_dssp SSEEEEEE
T ss_pred CCcEEEEE
Confidence 45555554
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=2e-21 Score=164.30 Aligned_cols=264 Identities=10% Similarity=0.079 Sum_probs=173.1
Q ss_pred CCCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCe--eeccCCCcEEEEECCCCCCcc
Q 021744 24 GGGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWG--RNNNFNNHSNNYRAGNSKNSN 101 (308)
Q Consensus 24 ~~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~--~s~~~d~~i~vwd~~~~~~~~ 101 (308)
+++..+++++.+++|++||..++.. ... .+. +.....++|+|+|++ +++..++.|.+||+.+++...
T Consensus 8 ~~~~~~v~~~~~~~v~~~d~~~~~~-----~~~-~~~-----~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~ 76 (331)
T 3u4y_A 8 TSNFGIVVEQHLRRISFFSTDTLEI-----LNQ-ITL-----GYDFVDTAITSDCSNVVVTSDFCQTLVQIETQLEPPKV 76 (331)
T ss_dssp CCCEEEEEEGGGTEEEEEETTTCCE-----EEE-EEC-----CCCEEEEEECSSSCEEEEEESTTCEEEEEECSSSSCEE
T ss_pred CCCEEEEEecCCCeEEEEeCcccce-----eee-EEc-----cCCcceEEEcCCCCEEEEEeCCCCeEEEEECCCCceeE
Confidence 3456789999999999999887611 000 010 111116899999996 555568999999998876521
Q ss_pred cccceeeeeeee-eeeecCCceEEeeCCC----eEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEE-EeeCCCc-E
Q 021744 102 INNRAVIKTDIL-CRNWVQGNCMYGEKCK----FLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLY-SGSKDET-V 174 (308)
Q Consensus 102 ~~~~~~~~~~~~-~~~~~~~~~~~g~~d~----~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~dg~-v 174 (308)
.... ....... +.++|++..+..+.+. .|.+||+.++ +.+..+..+ ..+.+++|+|++++++ +...++. |
T Consensus 77 ~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~-~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i 153 (331)
T 3u4y_A 77 VAIQ-EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKN-KFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTV 153 (331)
T ss_dssp EEEE-ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTT-EEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEE
T ss_pred Eecc-cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCC-CeEEEEECC-CCccceEECCCCCEEEEEecCCCceE
Confidence 1222 2223444 8899999874344333 9999999988 677777643 4568999999998654 4456688 9
Q ss_pred EEEeCCCCeEE-----EEEeCCCeeE--EEEcCCCEEEE-Ec-CCcEEEEEcCCCce---e-eeeCCCCCEEEEEEeCC-
Q 021744 175 RVWDCASGQCA-----GVINLGGEVG--CMISEGPWIFI-GV-TNFVKAWNTQTNTD---L-SLSGPVGQVYAMAVGND- 240 (308)
Q Consensus 175 ~~wd~~~~~~~-----~~~~~~~~v~--~~~~~~~~l~~-~~-d~~i~~wd~~~~~~---~-~~~~~~~~v~~~~~~~~- 240 (308)
.+|++.....+ ..+....... .+.++++++++ +. ++.|.+||+.+++. . .+. ....+..++|+|+
T Consensus 154 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg 232 (331)
T 3u4y_A 154 RRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG-TNNLPGTIVVSRDG 232 (331)
T ss_dssp EEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE-CSSCCCCEEECTTS
T ss_pred EEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc-CCCCCceEEECCCC
Confidence 99998864332 2222223333 33588886664 44 78999999998886 5 444 3466788999999
Q ss_pred -EEE-EEcCCCeEEEEEcCCCCcccccceecccc----CCC---eEE-EEecCCCeEEEee--ceEEEEeecCcee
Q 021744 241 -LLF-AGTQDGAILAWKFNVTTNCFEPAASLKVH----TDS---NRA-HFSRDVTSLLGSV--SFIMFIGQNNKGV 304 (308)
Q Consensus 241 -~l~-~g~~dg~i~iwd~~~~~~~~~~~~~~~~~----~~~---v~~-~~s~d~~~l~~s~--s~~i~~~~~~~~~ 304 (308)
+++ +...++.|.+||+.+++. +.+..+..+ ... ... +|+||+++|+++. +..+.++.-....
T Consensus 233 ~~l~v~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 233 STVYVLTESTVDVFNFNQLSGTL--SFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp SEEEEECSSEEEEEEEETTTTEE--EEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred CEEEEEEcCCCEEEEEECCCCce--eeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 454 445678899999988632 123322211 222 234 9999999887555 4456555544333
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=1.2e-20 Score=160.57 Aligned_cols=238 Identities=16% Similarity=0.057 Sum_probs=172.2
Q ss_pred CCeEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCe--eeccCCCcEEEEECCCCCCcccccceee----
Q 021744 35 QKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWG--RNNNFNNHSNNYRAGNSKNSNINNRAVI---- 108 (308)
Q Consensus 35 d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~--~s~~~d~~i~vwd~~~~~~~~~~~~~~~---- 108 (308)
++.|.+||..++.. ......+.....++++|+|+. ++...++.|.+||.++++..........
T Consensus 68 ~~~v~~~d~~~~~~-----------~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 136 (353)
T 3vgz_A 68 GGVVYRLDPVTLEV-----------TQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTE 136 (353)
T ss_dssp SEEEEEECTTTCCE-----------EEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCS
T ss_pred CccEEEEcCCCCeE-----------EEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCcccc
Confidence 67999999887611 000000111116899999996 6777789999999988765432221111
Q ss_pred ----eeeeeeeeecCCce-EEe--eCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCC
Q 021744 109 ----KTDILCRNWVQGNC-MYG--EKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCAS 181 (308)
Q Consensus 109 ----~~~~~~~~~~~~~~-~~g--~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~ 181 (308)
..+..+.+++++.. +.+ +.++.|.+||+.++ +.+..+..+...+..++|+|+++++++++.++.|.+||+.+
T Consensus 137 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~ 215 (353)
T 3vgz_A 137 EVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNI-KLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTAD 215 (353)
T ss_dssp SCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTT-EEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTT
T ss_pred ccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCC-ceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 12567899999875 333 35889999999998 77777775666788999999999999999999999999999
Q ss_pred CeEEEEEeC-----CCeeE--EEEcCCCEEEEEc--CCcEEEEEcCCCcee-eeeCCCCCEEEEEEeCC---EEEEEcCC
Q 021744 182 GQCAGVINL-----GGEVG--CMISEGPWIFIGV--TNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND---LLFAGTQD 248 (308)
Q Consensus 182 ~~~~~~~~~-----~~~v~--~~~~~~~~l~~~~--d~~i~~wd~~~~~~~-~~~~~~~~v~~~~~~~~---~l~~g~~d 248 (308)
++.+..+.. ..... ++.+++++++++. ++.|.+||+.+++.. .+.... ...++|+|+ ++++...+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~ 293 (353)
T 3vgz_A 216 NKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPARNEAYVTHRQA 293 (353)
T ss_dssp TEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--CCCEEEETTTTEEEEEETTT
T ss_pred CeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--CceEEECCCCCEEEEEECCC
Confidence 999888773 22232 4468898777554 589999999998877 444322 256899998 45555579
Q ss_pred CeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee
Q 021744 249 GAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV 291 (308)
Q Consensus 249 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~ 291 (308)
+.|.+||..++ +.+..+.... .+.. +|+|||++|+++.
T Consensus 294 ~~v~~~d~~~~----~~~~~~~~~~-~~~~~~~s~dg~~l~v~~ 332 (353)
T 3vgz_A 294 GKVSVIDAKSY----KVVKTFDTPT-HPNSLALSADGKTLYVSV 332 (353)
T ss_dssp TEEEEEETTTT----EEEEEEECCS-EEEEEEECTTSCEEEEEE
T ss_pred CeEEEEECCCC----eEEEEEecCC-CCCeEEEcCCCCEEEEEE
Confidence 99999999886 5566665444 4556 9999999777554
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=4.9e-21 Score=162.22 Aligned_cols=253 Identities=9% Similarity=0.114 Sum_probs=164.2
Q ss_pred CceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCC-CcEEEEECC--CCCCc
Q 021744 27 GLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFN-NHSNNYRAG--NSKNS 100 (308)
Q Consensus 27 ~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d-~~i~vwd~~--~~~~~ 100 (308)
.++++++.|+.|++|+....... ..+. ...|... .++|+|+|++ ++++.+ +.|++|+++ +++..
T Consensus 6 ~l~~~~~~~~~v~~~~~~~~~~~--~~~~--------~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~ 75 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNHEGAL--TLTQ--------VVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALT 75 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCE--EEEE--------EEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred EEEEeCCCCCeEEEEEECCCCcE--EEee--------eEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCcee
Confidence 35666688999999998532100 0000 0111112 6999999998 666665 999999997 44322
Q ss_pred ccccceeeeeeeeeeeecCCce-EE-eeCCCeEEEEEcCCCc--eeeeEeeCcccceEEEEEeCCCCEEEEee-CCCcEE
Q 021744 101 NINNRAVIKTDILCRNWVQGNC-MY-GEKCKFLHSWTVGDGF--KLLTQLEGHQKVVSGITLPSGSDKLYSGS-KDETVR 175 (308)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~-~~-g~~d~~i~iwd~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-~dg~v~ 175 (308)
..........+..+.++|++.. ++ +..++.|.+||+.++. +.+..+..+ ..+.+++|+|+++++++++ .++.|.
T Consensus 76 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~ 154 (343)
T 1ri6_A 76 FAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRIC 154 (343)
T ss_dssp EEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEE
T ss_pred eccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEE
Confidence 1111111225778899999975 34 4458999999994221 344455443 4688999999999888777 899999
Q ss_pred EEeCCC-CeEEE----EEe--CCCeeEE--EEcCCCEEEE-Ec-CCcEEEEEcCC--Ccee---eee---CC---CCCEE
Q 021744 176 VWDCAS-GQCAG----VIN--LGGEVGC--MISEGPWIFI-GV-TNFVKAWNTQT--NTDL---SLS---GP---VGQVY 233 (308)
Q Consensus 176 ~wd~~~-~~~~~----~~~--~~~~v~~--~~~~~~~l~~-~~-d~~i~~wd~~~--~~~~---~~~---~~---~~~v~ 233 (308)
+||+.+ ++... .+. ....+.. +.++++++++ +. ++.|.+||+.. ++.. ... .. ...+.
T Consensus 155 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 234 (343)
T 1ri6_A 155 LFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAA 234 (343)
T ss_dssp EEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEE
T ss_pred EEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCcc
Confidence 999987 65433 222 2223333 3578887764 43 88999999954 4322 121 11 23677
Q ss_pred EEEEeCC--EEE-EEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee
Q 021744 234 AMAVGND--LLF-AGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV 291 (308)
Q Consensus 234 ~~~~~~~--~l~-~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~ 291 (308)
.++|+|+ +|+ ++..++.|.+||+.......+.+..+..+.. +.. +|+|++++|+++.
T Consensus 235 ~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 235 DIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAG 295 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEEC
T ss_pred ceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEec
Confidence 8999998 444 6668999999999842211245555555555 555 9999999888665
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.86 E-value=6.6e-20 Score=171.50 Aligned_cols=267 Identities=9% Similarity=-0.056 Sum_probs=179.6
Q ss_pred CCCceEEecC-CC-----eEEEeecCCCCCCCCCcccccCC----------CC---CCccccccc-eeEEecCCCe-eec
Q 021744 25 GGGLSTADTR-QK-----VCNYWRAGKCNRFPCPYLHRELP----------LP---PAATANGAA-AKRFANNTWG-RNN 83 (308)
Q Consensus 25 ~~~~~~s~s~-d~-----~i~~W~~~~~~~~~~~~~~~~~~----------~~---~~~~gh~~~-~i~~s~~g~~-~s~ 83 (308)
.|..|++++. |+ +|++||..+++.......+...| .. ....+.... .++|+|||+. +++
T Consensus 47 dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~ 126 (741)
T 2ecf_A 47 DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFP 126 (741)
T ss_dssp TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEE
T ss_pred CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEE
Confidence 3567888887 88 99999988763211000000000 00 000000112 6899999998 666
Q ss_pred cCCCcEEEEECCCC---CCcccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCcccc--------
Q 021744 84 NFNNHSNNYRAGNS---KNSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKV-------- 152 (308)
Q Consensus 84 ~~d~~i~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~-------- 152 (308)
+. ++|++||+.++ +.. ....+...+..+.|+|+|..+.-..++.|++||+.++ +.......+...
T Consensus 127 ~~-~~i~~~d~~~~~~~~~~--~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g-~~~~~~~~~~~~~~~g~~~~ 202 (741)
T 2ecf_A 127 LG-GELYLYDLKQEGKAAVR--QLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASG-RQMQLTADGSTTIGNGIAEF 202 (741)
T ss_dssp ET-TEEEEEESSSCSTTSCC--BCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTT-EEEECCCCCCSSEEESCCCH
T ss_pred eC-CcEEEEECCCCCcceEE--EcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCC-CEEEeccCCccceeccccce
Confidence 65 89999999877 332 3344455688899999998744444679999999987 454444433332
Q ss_pred --------eEEEEEeCCCCEEEEeeCCC---------------------------------cEEEEeCCC-CeEEEEEe-
Q 021744 153 --------VSGITLPSGSDKLYSGSKDE---------------------------------TVRVWDCAS-GQCAGVIN- 189 (308)
Q Consensus 153 --------v~~~~~~~~~~~l~s~s~dg---------------------------------~v~~wd~~~-~~~~~~~~- 189 (308)
+..++|+||+++|++++.|+ .|.+||+.+ ++......
T Consensus 203 v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~ 282 (741)
T 2ecf_A 203 VADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLG 282 (741)
T ss_dssp HHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCC
T ss_pred eeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCC
Confidence 47899999999999988776 889999998 77654432
Q ss_pred --CCCeeE--EEEcCCCEEEEEc------CCcEEEEEcCCCceee-eeCCCC----CEEEEEEeCC--EEEEEcCCCeEE
Q 021744 190 --LGGEVG--CMISEGPWIFIGV------TNFVKAWNTQTNTDLS-LSGPVG----QVYAMAVGND--LLFAGTQDGAIL 252 (308)
Q Consensus 190 --~~~~v~--~~~~~~~~l~~~~------d~~i~~wd~~~~~~~~-~~~~~~----~v~~~~~~~~--~l~~g~~dg~i~ 252 (308)
+...+. ++ +++++|+++. +..|.+||+.+++... +..+.. .+.+++|+|| ++++++.||.++
T Consensus 283 ~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~ 361 (741)
T 2ecf_A 283 KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQH 361 (741)
T ss_dssp SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCE
T ss_pred CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccE
Confidence 233333 45 8899888542 3579999999998763 333332 4468899999 888889999888
Q ss_pred EEEcCCCCcccccceeccccCCCeEE--EEecCCCeEEEee------ceEEEEeec
Q 021744 253 AWKFNVTTNCFEPAASLKVHTDSNRA--HFSRDVTSLLGSV------SFIMFIGQN 300 (308)
Q Consensus 253 iwd~~~~~~~~~~~~~~~~~~~~v~~--~~s~d~~~l~~s~------s~~i~~~~~ 300 (308)
||.+.... . ...+..+...+.. .|+||++.|+.++ ...||....
T Consensus 362 l~~~~~~~---~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 362 LYRIDSKG---K-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp EEEECSSS---C-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred EEEEcCCC---C-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 88877431 4 5667777777765 5999999886443 345777653
No 137
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=1.4e-19 Score=158.88 Aligned_cols=188 Identities=9% Similarity=-0.064 Sum_probs=137.8
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCCC--------cc--c----ccceeeeeeeeeeeecCCce-E----EeeCCCe
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSKN--------SN--I----NNRAVIKTDILCRNWVQGNC-M----YGEKCKF 130 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~--------~~--~----~~~~~~~~~~~~~~~~~~~~-~----~g~~d~~ 130 (308)
.+++++++.+ ++++.|+ +++|+...... .. . ....+...+..+.|++++.. + +++.|+.
T Consensus 41 ~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~ 119 (434)
T 2oit_A 41 LLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSI 119 (434)
T ss_dssp CEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTEEE
T ss_pred EEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCCce
Confidence 6899999999 8888887 99987631100 00 0 00112334889999999976 4 6888999
Q ss_pred EEEEEcCCC-----c-----eeeeEeeCcccceEEEEEeCC-CCEEEEeeCCCcEEEEeCCCCeEEEEEe-CCCeeEEE-
Q 021744 131 LHSWTVGDG-----F-----KLLTQLEGHQKVVSGITLPSG-SDKLYSGSKDETVRVWDCASGQCAGVIN-LGGEVGCM- 197 (308)
Q Consensus 131 i~iwd~~~~-----~-----~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~dg~v~~wd~~~~~~~~~~~-~~~~v~~~- 197 (308)
|++||+.+. . ..+..+.+|...|.+++|+|+ +.+|++++.||+|++||+++++.+.... +...+.++
T Consensus 120 v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~ 199 (434)
T 2oit_A 120 IAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVC 199 (434)
T ss_dssp EEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEE
T ss_pred EEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEE
Confidence 999998653 1 124566789999999999998 7899999999999999999987665444 56677766
Q ss_pred -EcCCCEEEEEc-CCcEEEEEcCCCceeeeeCC-------CCCEEEEEEeCC--EE-EEEcCCC------eEEEEEcCCC
Q 021744 198 -ISEGPWIFIGV-TNFVKAWNTQTNTDLSLSGP-------VGQVYAMAVGND--LL-FAGTQDG------AILAWKFNVT 259 (308)
Q Consensus 198 -~~~~~~l~~~~-d~~i~~wd~~~~~~~~~~~~-------~~~v~~~~~~~~--~l-~~g~~dg------~i~iwd~~~~ 259 (308)
.+++++|++|+ |+.|++||++......+..| ...+.+++|+++ ++ +..+.|| .+++|+++..
T Consensus 200 wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 200 WSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp ECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 47899999877 99999999983322244333 237999999998 33 2344443 3899999865
No 138
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.85 E-value=1.9e-19 Score=152.94 Aligned_cols=231 Identities=12% Similarity=0.083 Sum_probs=160.2
Q ss_pred CCCCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCe--eeccCCCcEEEEECCCCCCc
Q 021744 23 GGGGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWG--RNNNFNNHSNNYRAGNSKNS 100 (308)
Q Consensus 23 ~~~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~--~s~~~d~~i~vwd~~~~~~~ 100 (308)
+..+.++++++.+++|++||..++.. +. ..+.... .....++|+|+|+. ++...+++|.+||+.+++..
T Consensus 8 ~~~~~~~v~~~~~~~v~~~d~~~~~~-----~~-~~~~~~~---~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 8 KAGHEYMIVTNYPNNLHVVDVASDTV-----YK-SCVMPDK---FGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNT 78 (349)
T ss_dssp CTTCEEEEEEETTTEEEEEETTTTEE-----EE-EEECSSC---CSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred cCCCEEEEEeCCCCeEEEEECCCCcE-----EE-EEecCCC---CCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEE
Confidence 44567899999999999999887611 10 0111100 01116899999986 66778899999999877654
Q ss_pred cccccee-----eeeeeeeeeecCCce-EEeeCC------------CeEEEEEcCCCc--eeeeEeeCcccceEEEEEeC
Q 021744 101 NINNRAV-----IKTDILCRNWVQGNC-MYGEKC------------KFLHSWTVGDGF--KLLTQLEGHQKVVSGITLPS 160 (308)
Q Consensus 101 ~~~~~~~-----~~~~~~~~~~~~~~~-~~g~~d------------~~i~iwd~~~~~--~~~~~~~~h~~~v~~~~~~~ 160 (308)
......+ ...+..+.++|++.. ++++.+ +.|.+||+.++. +.+..+. +...+.+++|+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~ 157 (349)
T 1jmx_B 79 FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAAD 157 (349)
T ss_dssp EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECT
T ss_pred EEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECC
Confidence 3222111 233678899999976 555544 899999998752 2233444 344688999999
Q ss_pred CCCEEEEeeCCCcEEEEeCCCCeEEEEEeCCC-------------------------e----------------------
Q 021744 161 GSDKLYSGSKDETVRVWDCASGQCAGVINLGG-------------------------E---------------------- 193 (308)
Q Consensus 161 ~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~~~-------------------------~---------------------- 193 (308)
+++ ++.++. .|.+||+.+++.+..+.... .
T Consensus 158 dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 234 (349)
T 1jmx_B 158 DGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG 234 (349)
T ss_dssp TSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEE
T ss_pred CCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccccccee
Confidence 999 555544 49999999998877765321 0
Q ss_pred ----------------------eE--EEEc-CCCEEEEEcCCcEEEEEcCCCceeeeeCCCCCEEEEEEeCC--EEEEEc
Q 021744 194 ----------------------VG--CMIS-EGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LLFAGT 246 (308)
Q Consensus 194 ----------------------v~--~~~~-~~~~l~~~~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~--~l~~g~ 246 (308)
.. ++.+ ++++++++ ++.|.+||+.+++..........+.+++|+|+ +|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 313 (349)
T 1jmx_B 235 YLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGG 313 (349)
T ss_dssp EEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEES
T ss_pred EEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEec
Confidence 00 1136 88888887 88999999999987733223445778999998 677788
Q ss_pred CCCeEEEEEcCCCCcccccceeccc
Q 021744 247 QDGAILAWKFNVTTNCFEPAASLKV 271 (308)
Q Consensus 247 ~dg~i~iwd~~~~~~~~~~~~~~~~ 271 (308)
.++.|++||+.+. +.+..+..
T Consensus 314 ~~~~v~v~d~~~~----~~~~~~~~ 334 (349)
T 1jmx_B 314 TFNDLAVFNPDTL----EKVKNIKL 334 (349)
T ss_dssp BSSEEEEEETTTT----EEEEEEEC
T ss_pred CCCeEEEEecccc----ceeeeeec
Confidence 8899999999886 55555543
No 139
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.85 E-value=7.5e-19 Score=163.52 Aligned_cols=246 Identities=11% Similarity=0.077 Sum_probs=165.4
Q ss_pred CCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCC-----CCCcccccc
Q 021744 34 RQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGN-----SKNSNINNR 105 (308)
Q Consensus 34 ~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~-----~~~~~~~~~ 105 (308)
.|++|++||..++. .. .+..+... .++|+|||+. +. ..|++|++||+.+ ++.......
T Consensus 99 ~~~~i~~~d~~~~~---~~----------~l~~~~~~~~~~~~SpdG~~la~-~~~~~i~v~~~~~~~~~~g~~~~~~~~ 164 (706)
T 2z3z_A 99 TQGGLVGFDMLARK---VT----------YLFDTNEETASLDFSPVGDRVAY-VRNHNLYIARGGKLGEGMSRAIAVTID 164 (706)
T ss_dssp ETTEEEEEETTTTE---EE----------EEECCTTCCTTCEECTTSSEEEE-EETTEEEEEECBCTTSCCCCCEESCSC
T ss_pred ECCEEEEEECCCCc---eE----------EccCCcccccCCcCCCCCCEEEE-EECCeEEEEecCcccccCCCcEEeccC
Confidence 46999999987761 00 01111111 6899999999 66 4789999999987 654322111
Q ss_pred eeee-------------eeeeeeeecCCce-EEee---------------------------------CCCeEEEEEcCC
Q 021744 106 AVIK-------------TDILCRNWVQGNC-MYGE---------------------------------KCKFLHSWTVGD 138 (308)
Q Consensus 106 ~~~~-------------~~~~~~~~~~~~~-~~g~---------------------------------~d~~i~iwd~~~ 138 (308)
.... .+..+.|+|+|.. ++++ .+..|++||+.+
T Consensus 165 ~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~ 244 (706)
T 2z3z_A 165 GTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLAT 244 (706)
T ss_dssp CBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTT
T ss_pred CCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCC
Confidence 1111 1478889999976 5554 457899999998
Q ss_pred CceeeeEe--eCcccceEEEEEeCCCCEEEEeeCCC-----cEEEEeCCCCeEEEEEe---CCCe-----eEEEEc--CC
Q 021744 139 GFKLLTQL--EGHQKVVSGITLPSGSDKLYSGSKDE-----TVRVWDCASGQCAGVIN---LGGE-----VGCMIS--EG 201 (308)
Q Consensus 139 ~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~s~dg-----~v~~wd~~~~~~~~~~~---~~~~-----v~~~~~--~~ 201 (308)
+ +..... ..|...+..++|+||++.|++++.++ .|++||+.+++....+. .... ...+++ ++
T Consensus 245 ~-~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg 323 (706)
T 2z3z_A 245 G-KTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNN 323 (706)
T ss_dssp T-EEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSS
T ss_pred C-ceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCC
Confidence 8 443333 24677899999999999999888776 99999999984333332 2211 124567 88
Q ss_pred CEEEEEc-CCcEEEEEcC-CCc-eeeeeCCCCCEEE-EEEeCC--EE-EEEcCCC----eEEEEEcCCCCcccccceecc
Q 021744 202 PWIFIGV-TNFVKAWNTQ-TNT-DLSLSGPVGQVYA-MAVGND--LL-FAGTQDG----AILAWKFNVTTNCFEPAASLK 270 (308)
Q Consensus 202 ~~l~~~~-d~~i~~wd~~-~~~-~~~~~~~~~~v~~-~~~~~~--~l-~~g~~dg----~i~iwd~~~~~~~~~~~~~~~ 270 (308)
++++++. ++.+++|++. ++. ...+..+...+.+ ++|+|+ .| ++++.++ .|..||+.++ + ...+.
T Consensus 324 ~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~----~-~~~l~ 398 (706)
T 2z3z_A 324 QFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG----K-TKDLT 398 (706)
T ss_dssp EEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC----C-CEESC
T ss_pred EEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC----C-ceecc
Confidence 8888776 7888888765 333 4467777777877 799998 44 5555555 6667777664 2 33333
Q ss_pred ccCCCeEE-EEecCCCeEEEeec-----eEEEEeec
Q 021744 271 VHTDSNRA-HFSRDVTSLLGSVS-----FIMFIGQN 300 (308)
Q Consensus 271 ~~~~~v~~-~~s~d~~~l~~s~s-----~~i~~~~~ 300 (308)
+...+.. +|+|||++++.+++ ..++++..
T Consensus 399 -~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~ 433 (706)
T 2z3z_A 399 -PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNI 433 (706)
T ss_dssp -CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEES
T ss_pred -CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEEC
Confidence 5566777 99999999885541 34666653
No 140
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.85 E-value=8.5e-20 Score=169.89 Aligned_cols=266 Identities=9% Similarity=-0.021 Sum_probs=172.3
Q ss_pred CCceEEecCCCeEEEeecCCCCCC-CCCcccccC--CCCCC---cc-ccccc-eeEEecCCCeeeccCCCcEEEEECCCC
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRF-PCPYLHREL--PLPPA---AT-ANGAA-AKRFANNTWGRNNNFNNHSNNYRAGNS 97 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~-~~~~~~~~~--~~~~~---~~-gh~~~-~i~~s~~g~~~s~~~d~~i~vwd~~~~ 97 (308)
+..+++.+.|+ | +||..++... ...+.+... .+... .+ .+... .++|+|+ ..+..+.|++|++||+.++
T Consensus 35 g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~~~~i~~~d~~~~ 111 (706)
T 2z3z_A 35 GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFTQGGLVGFDMLAR 111 (706)
T ss_dssp TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEETTEEEEEETTTT
T ss_pred CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEECCEEEEEECCCC
Confidence 45677777787 8 9999887321 000101000 00000 00 01122 7899999 5522235699999999877
Q ss_pred CCcccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCC-----CceeeeEeeCcccc--------------eEEEEE
Q 021744 98 KNSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGD-----GFKLLTQLEGHQKV--------------VSGITL 158 (308)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~-----~~~~~~~~~~h~~~--------------v~~~~~ 158 (308)
+.. ....+...+..+.|+|+|..+.-..++.|++|++.+ + +.......+... +.+++|
T Consensus 112 ~~~--~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g-~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~ 188 (706)
T 2z3z_A 112 KVT--YLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMS-RAIAVTIDGTETLVYGQAVHQREFGIEKGTFW 188 (706)
T ss_dssp EEE--EEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCC-CCEESCSCCBTTEEESSCCGGGCTTCCCSEEE
T ss_pred ceE--EccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCC-CcEEeccCCCCCeEcccchhhhhcCCCceEEE
Confidence 543 222233447788999999874446789999999998 7 444433433333 489999
Q ss_pred eCCCCEEEEee---------------------------------CCCcEEEEeCCCCeEEEEEe---CCCeeEEE--EcC
Q 021744 159 PSGSDKLYSGS---------------------------------KDETVRVWDCASGQCAGVIN---LGGEVGCM--ISE 200 (308)
Q Consensus 159 ~~~~~~l~s~s---------------------------------~dg~v~~wd~~~~~~~~~~~---~~~~v~~~--~~~ 200 (308)
+||+++|++++ .+..|++||+.+++...... +...+..+ +++
T Consensus 189 SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 268 (706)
T 2z3z_A 189 SPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPD 268 (706)
T ss_dssp CTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTT
T ss_pred CCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECC
Confidence 99999999987 44689999999988655442 33444444 588
Q ss_pred CCEEEEEc-CC-----cEEEEEcCCC-ceeeee--CCCC---CEEEEEEeC--C--EEEEEcCCCeEEEEEcCCCCcccc
Q 021744 201 GPWIFIGV-TN-----FVKAWNTQTN-TDLSLS--GPVG---QVYAMAVGN--D--LLFAGTQDGAILAWKFNVTTNCFE 264 (308)
Q Consensus 201 ~~~l~~~~-d~-----~i~~wd~~~~-~~~~~~--~~~~---~v~~~~~~~--~--~l~~g~~dg~i~iwd~~~~~~~~~ 264 (308)
+++|+++. ++ .|.+||+.++ +...+. .+.. .+.+++|+| + +++++..|+.+++|++.... .
T Consensus 269 g~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~---~ 345 (706)
T 2z3z_A 269 ENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTG---R 345 (706)
T ss_dssp SSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTS---C
T ss_pred CCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCC---C
Confidence 99888654 54 8999999998 444332 2222 246789999 8 88888899999999887321 4
Q ss_pred cceeccccCCCeEE--EEecCCCeEEEee--c----eEEEEeec
Q 021744 265 PAASLKVHTDSNRA--HFSRDVTSLLGSV--S----FIMFIGQN 300 (308)
Q Consensus 265 ~~~~~~~~~~~v~~--~~s~d~~~l~~s~--s----~~i~~~~~ 300 (308)
.+..+..+...+.. +|+||++.|+.++ + ..||.+..
T Consensus 346 ~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 346 LIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp EEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred EEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 55667777766753 8999999887554 2 47887764
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.85 E-value=2e-19 Score=167.77 Aligned_cols=258 Identities=5% Similarity=-0.062 Sum_probs=167.1
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCcccccc----c-eeEEecCCCe-eeccCC---------CcEE
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGA----A-AKRFANNTWG-RNNNFN---------NHSN 90 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~----~-~i~~s~~g~~-~s~~~d---------~~i~ 90 (308)
|.++++ +.|++|++||..++.. . ....+|.. . .++|||||++ ++++.+ +.|.
T Consensus 28 g~~~~~-~~dg~i~~~d~~~g~~---~---------~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~ 94 (723)
T 1xfd_A 28 TEFIYR-EQKGTVRLWNVETNTS---T---------VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV 94 (723)
T ss_dssp SCBCCC-CSSSCEEEBCGGGCCC---E---------EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred CcEEEE-eCCCCEEEEECCCCcE---E---------EEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence 345655 7899999999987721 0 11111221 2 7899999998 777654 7788
Q ss_pred EEECCCCCCccc-ccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccce---------------
Q 021744 91 NYRAGNSKNSNI-NNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVV--------------- 153 (308)
Q Consensus 91 vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v--------------- 153 (308)
+||+++++.... ....+...+..+.|+|+|.. ++++ ++.|++||+.++ +.......+...+
T Consensus 95 ~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~g-~~~~~~~~~~~~~~~~g~~~~v~~ee~~ 172 (723)
T 1xfd_A 95 LSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGK-QAIRVVSTGKEGVIYNGLSDWLYEEEIL 172 (723)
T ss_dssp EEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSS-CCEEEECCCBTTTEEEEECCHHHHHTTS
T ss_pred EEECCCCceEeccCCccccccccccEECCCCCEEEEEE-CCeEEEEECCCC-ceEEEecCCCCCceECcccceeEEEEec
Confidence 999988764211 11223334778999999976 4444 489999999987 4555444444333
Q ss_pred ---EEEEEeCCCCEEEEeeCCC----------------------------------cEEEEeCCCCeEEEEEeC------
Q 021744 154 ---SGITLPSGSDKLYSGSKDE----------------------------------TVRVWDCASGQCAGVINL------ 190 (308)
Q Consensus 154 ---~~~~~~~~~~~l~s~s~dg----------------------------------~v~~wd~~~~~~~~~~~~------ 190 (308)
.+++|+||+++|++++.|+ .|++||+.+++....+..
T Consensus 173 ~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~ 252 (723)
T 1xfd_A 173 KTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRM 252 (723)
T ss_dssp SSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGG
T ss_pred cCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCC
Confidence 7899999999999887653 799999998876555542
Q ss_pred -CCeeEE--EEcCCCEEEEEc-----CCcEEEEEcCCCceeee-e-CCCCCE----EEEEEeCC--EEE-E-EcCCC---
Q 021744 191 -GGEVGC--MISEGPWIFIGV-----TNFVKAWNTQTNTDLSL-S-GPVGQV----YAMAVGND--LLF-A-GTQDG--- 249 (308)
Q Consensus 191 -~~~v~~--~~~~~~~l~~~~-----d~~i~~wd~~~~~~~~~-~-~~~~~v----~~~~~~~~--~l~-~-g~~dg--- 249 (308)
...+.. ++|+++++++.. +..|++||+.+++...+ . .+...+ ..++|+|| .|+ . +..++
T Consensus 253 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 332 (723)
T 1xfd_A 253 REYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRG 332 (723)
T ss_dssp SSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSS
T ss_pred ccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCc
Confidence 233443 358898887543 24799999999887632 2 233433 37899999 333 3 55677
Q ss_pred ---eEEEEEc-CCCCcccccceeccccCC-CeEE-EEecCCCeEEEee------ceEEEEeec
Q 021744 250 ---AILAWKF-NVTTNCFEPAASLKVHTD-SNRA-HFSRDVTSLLGSV------SFIMFIGQN 300 (308)
Q Consensus 250 ---~i~iwd~-~~~~~~~~~~~~~~~~~~-~v~~-~~s~d~~~l~~s~------s~~i~~~~~ 300 (308)
.|.+||+ ..+.. .....+..+.. .... +|+|||+.|+.++ ...||....
T Consensus 333 ~~~~l~~~d~~~~~~~--~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 333 KFYHITVSSSQPNSSN--DNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp CEEEEEEECSSCCSSS--CCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred ceeEEEEEeccCCCCc--cceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 4666663 33210 01344443333 3444 8999999987443 256776653
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.85 E-value=1.9e-18 Score=145.99 Aligned_cols=220 Identities=8% Similarity=0.009 Sum_probs=156.1
Q ss_pred EEecCCCe--eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce--EEeeCCCeEEEEEcCCCcee-eeEee
Q 021744 73 RFANNTWG--RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC--MYGEKCKFLHSWTVGDGFKL-LTQLE 147 (308)
Q Consensus 73 ~~s~~g~~--~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~d~~i~iwd~~~~~~~-~~~~~ 147 (308)
.|.+++.. ++++.+++|++||+++++...... .....+ .+.++|++.. +++..++.|++||+.++ +. ...+.
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~-~~~~~~~~ 80 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQIT-LGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLE-PPKVVAIQ 80 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEE-CCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSS-SCEEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEE-ccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCC-ceeEEecc
Confidence 45566555 888999999999998886653322 223335 8899999974 44445889999999988 55 66777
Q ss_pred CcccceEEEEEeCCCCEEEEeeCCC---cEEEEeCCCCeEEEEEeCCCeeEEE--EcCCCEEEEE-c-CCc-EEEEEcCC
Q 021744 148 GHQKVVSGITLPSGSDKLYSGSKDE---TVRVWDCASGQCAGVINLGGEVGCM--ISEGPWIFIG-V-TNF-VKAWNTQT 219 (308)
Q Consensus 148 ~h~~~v~~~~~~~~~~~l~s~s~dg---~v~~wd~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~-~-d~~-i~~wd~~~ 219 (308)
.+..+..+++|+|+++++++...++ .|.+||+++++.+..+........+ .+++++++++ . ++. |.+|++..
T Consensus 81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~ 160 (331)
T 3u4y_A 81 EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDA 160 (331)
T ss_dssp ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECT
T ss_pred cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECC
Confidence 6666666699999999998655553 8999999999998888855444443 5788766544 4 577 99999886
Q ss_pred Ccee-----eeeCCCCCEEEEEEeCC---EEEEEcCCCeEEEEEcCCCCccccc---ceeccccCCCeEE-EEecCCCeE
Q 021744 220 NTDL-----SLSGPVGQVYAMAVGND---LLFAGTQDGAILAWKFNVTTNCFEP---AASLKVHTDSNRA-HFSRDVTSL 287 (308)
Q Consensus 220 ~~~~-----~~~~~~~~v~~~~~~~~---~l~~g~~dg~i~iwd~~~~~~~~~~---~~~~~~~~~~v~~-~~s~d~~~l 287 (308)
.... ........+..++|+|+ +++++..++.|++||+.++ +. +..+..+ ..+.. +|+|||++|
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~----~~~~~~~~~~~~-~~~~~~~~spdg~~l 235 (331)
T 3u4y_A 161 DGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNP----ENITLLNAVGTN-NLPGTIVVSRDGSTV 235 (331)
T ss_dssp TCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSST----TSCEEEEEEECS-SCCCCEEECTTSSEE
T ss_pred CCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCC----cccceeeeccCC-CCCceEEECCCCCEE
Confidence 4332 12233456899999999 4455667899999999876 44 5556544 34445 999999977
Q ss_pred EEee--ceEEEEeec
Q 021744 288 LGSV--SFIMFIGQN 300 (308)
Q Consensus 288 ~~s~--s~~i~~~~~ 300 (308)
+++. +..|+++..
T Consensus 236 ~v~~~~~~~i~~~d~ 250 (331)
T 3u4y_A 236 YVLTESTVDVFNFNQ 250 (331)
T ss_dssp EEECSSEEEEEEEET
T ss_pred EEEEcCCCEEEEEEC
Confidence 6543 555666553
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.84 E-value=2.2e-18 Score=161.11 Aligned_cols=257 Identities=8% Similarity=-0.018 Sum_probs=173.8
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCCccc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNI 102 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~ 102 (308)
+..|++++. ++|++||..++. .+....+..|... .++|+|||+. +.++ ++.|++||+.+++....
T Consensus 120 g~~l~~~~~-~~i~~~d~~~~~----------~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 120 AQRLLFPLG-GELYLYDLKQEG----------KAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQL 187 (741)
T ss_dssp SSEEEEEET-TEEEEEESSSCS----------TTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEEC
T ss_pred CCEEEEEeC-CcEEEEECCCCC----------cceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEe
Confidence 566777765 999999987651 0011223333333 7899999998 6665 56899999987654322
Q ss_pred ccceee---------------eeeeeeeeecCCce-EEeeCCC---------------------------------eEEE
Q 021744 103 NNRAVI---------------KTDILCRNWVQGNC-MYGEKCK---------------------------------FLHS 133 (308)
Q Consensus 103 ~~~~~~---------------~~~~~~~~~~~~~~-~~g~~d~---------------------------------~i~i 133 (308)
...... ..+..+.|+|+|.. ++++.|+ .|++
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~ 267 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGV 267 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEE
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEE
Confidence 111111 01467899999975 6665554 7889
Q ss_pred EEcCC-CceeeeEee--CcccceEEEEEeCCCCEEEEeeC-----CCcEEEEeCCCCeEEEEEeCCC-------eeEEEE
Q 021744 134 WTVGD-GFKLLTQLE--GHQKVVSGITLPSGSDKLYSGSK-----DETVRVWDCASGQCAGVINLGG-------EVGCMI 198 (308)
Q Consensus 134 wd~~~-~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~-----dg~v~~wd~~~~~~~~~~~~~~-------~v~~~~ 198 (308)
||+.+ + +...... .|...+..++| ||+++|+.++. +..|++||+.+++....+.... ....++
T Consensus 268 ~d~~~~~-~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~s 345 (741)
T 2ecf_A 268 ISPAEQA-QTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFL 345 (741)
T ss_dssp ECSSTTC-CCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEEC
T ss_pred EECCCCC-ceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEEC
Confidence 99988 7 4433332 47788999999 99999887654 5689999999998877665221 123456
Q ss_pred cCCCEEEEEc-CCcEEEEEcC-CCceeeeeCCCCCEEEE-EEeCC--EE-EEEcCCC--eEEEEEcCCCCcccccceecc
Q 021744 199 SEGPWIFIGV-TNFVKAWNTQ-TNTDLSLSGPVGQVYAM-AVGND--LL-FAGTQDG--AILAWKFNVTTNCFEPAASLK 270 (308)
Q Consensus 199 ~~~~~l~~~~-d~~i~~wd~~-~~~~~~~~~~~~~v~~~-~~~~~--~l-~~g~~dg--~i~iwd~~~~~~~~~~~~~~~ 270 (308)
+++++++++. ++.+++|.+. .++...+..+...+.++ .|+|+ .+ ++++.++ .+++|++.... ..+..+.
T Consensus 346 pdg~~~~~~~~~g~~~l~~~~~~~~~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g---~~~~~l~ 422 (741)
T 2ecf_A 346 DDGSILWSSERTGFQHLYRIDSKGKAAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQG---GQPQRLS 422 (741)
T ss_dssp TTSCEEEEECTTSSCEEEEECSSSCEEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTC---CCCEECC
T ss_pred CCCeEEEEecCCCccEEEEEcCCCCeeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCC---CCeeecc
Confidence 8899777766 7767776654 23344677778888887 59998 44 5666666 89999987532 3345555
Q ss_pred ccCCCeEE-EEecCCCeEEEee-----ceEEEEeec
Q 021744 271 VHTDSNRA-HFSRDVTSLLGSV-----SFIMFIGQN 300 (308)
Q Consensus 271 ~~~~~v~~-~~s~d~~~l~~s~-----s~~i~~~~~ 300 (308)
. ...+.. +|+|||++|+... ...+++...
T Consensus 423 ~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~ 457 (741)
T 2ecf_A 423 K-APGMHSASFARNASVYVDSWSNNSTPPQIELFRA 457 (741)
T ss_dssp C-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEET
T ss_pred c-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEc
Confidence 4 455667 9999999988554 245666553
No 144
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.84 E-value=6e-18 Score=143.92 Aligned_cols=222 Identities=9% Similarity=-0.011 Sum_probs=163.1
Q ss_pred eeEEecCCCe-eeccC-------CCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce--EEeeCCCeEEEEEcCCCc
Q 021744 71 AKRFANNTWG-RNNNF-------NNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC--MYGEKCKFLHSWTVGDGF 140 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~-------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~d~~i~iwd~~~~~ 140 (308)
.++++|+++. ++++. +++|.+||..+++.... ......+..+.+++++.. ++...++.|.+||+.++
T Consensus 45 ~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~--~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~- 121 (353)
T 3vgz_A 45 EMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQA--IHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTG- 121 (353)
T ss_dssp EEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEE--EEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTC-
T ss_pred ceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEE--EecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCC-
Confidence 6899999988 55443 56899999988765422 222334677889999974 55666899999999998
Q ss_pred eeeeEeeCcccc---------eEEEEEeCCCCEEEEee--CCCcEEEEeCCCCeEEEEEe-CCCeeE--EEEcCCCEEEE
Q 021744 141 KLLTQLEGHQKV---------VSGITLPSGSDKLYSGS--KDETVRVWDCASGQCAGVIN-LGGEVG--CMISEGPWIFI 206 (308)
Q Consensus 141 ~~~~~~~~h~~~---------v~~~~~~~~~~~l~s~s--~dg~v~~wd~~~~~~~~~~~-~~~~v~--~~~~~~~~l~~ 206 (308)
+.+..+..+... +.+++|+|++++++.++ .++.|.+||+++++.+..+. ...... .+.++++++++
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 201 (353)
T 3vgz_A 122 EVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYT 201 (353)
T ss_dssp CEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEE
T ss_pred eeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEE
Confidence 677777654322 78899999999877665 47899999999999998887 443233 45789998887
Q ss_pred Ec-CCcEEEEEcCCCcee-eeeC----CCCCEEEEEEeCC--EEE-EEcCCCeEEEEEcCCCCcccccceeccccCCCeE
Q 021744 207 GV-TNFVKAWNTQTNTDL-SLSG----PVGQVYAMAVGND--LLF-AGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNR 277 (308)
Q Consensus 207 ~~-d~~i~~wd~~~~~~~-~~~~----~~~~v~~~~~~~~--~l~-~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~ 277 (308)
+. ++.|.+||+.+++.. .+.. +...+..++|+|+ +++ +...++.|.+||+.++ +.+..+.... +..
T Consensus 202 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~----~~~~~~~~~~-~~~ 276 (353)
T 3vgz_A 202 TNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNG----NILAKVAAPE-SLA 276 (353)
T ss_dssp ECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTC----CEEEEEECSS-CCC
T ss_pred EcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCC----cEEEEEEcCC-Cce
Confidence 66 889999999999877 3332 4557889999998 444 4555699999999886 5555554332 333
Q ss_pred EEEecCCCeEEEee--ceEEEEeec
Q 021744 278 AHFSRDVTSLLGSV--SFIMFIGQN 300 (308)
Q Consensus 278 ~~~s~d~~~l~~s~--s~~i~~~~~ 300 (308)
.+|+|++++++++. +..|+++..
T Consensus 277 ~~~s~dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 277 VLFNPARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEECCCCCEEEEEECCCCeEEEEEC
Confidence 49999999776554 556666553
No 145
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.83 E-value=1.8e-18 Score=142.95 Aligned_cols=204 Identities=7% Similarity=0.042 Sum_probs=148.9
Q ss_pred eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCC-CceeeeEeeCc-ccceEEEEE
Q 021744 81 RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGD-GFKLLTQLEGH-QKVVSGITL 158 (308)
Q Consensus 81 ~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~-~~~~~~~~~~h-~~~v~~~~~ 158 (308)
.+++.|++|++||+.+++.. ....+...+..+.|+|++..+..+.++.|++||+.+ + +....+.++ ...+.+++|
T Consensus 16 ~~~~~~~~i~~~d~~~~~~~--~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~ 92 (297)
T 2ojh_A 16 PGGSMRSSIEIFNIRTRKMR--VVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDP-SPEKVDTGFATICNNDHGI 92 (297)
T ss_dssp --CCCCEEEEEEETTTTEEE--EEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCC-SCEECCCTTCCCBCSCCEE
T ss_pred CCCCcceeEEEEeCCCCcee--eeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCC-CceEeccccccccccceEE
Confidence 45678999999999877654 344566678999999999874445589999999998 7 555555555 478899999
Q ss_pred eCCCCEEEEee--CCCcEEEE--eCCCCeEEEEEeCCCeeEE--EEcCCCEEE-EEc-CCcEEEEEc--CCCceeeeeCC
Q 021744 159 PSGSDKLYSGS--KDETVRVW--DCASGQCAGVINLGGEVGC--MISEGPWIF-IGV-TNFVKAWNT--QTNTDLSLSGP 228 (308)
Q Consensus 159 ~~~~~~l~s~s--~dg~v~~w--d~~~~~~~~~~~~~~~v~~--~~~~~~~l~-~~~-d~~i~~wd~--~~~~~~~~~~~ 228 (308)
+|++++|++++ .++...+| ++.+++ ...+.....+.. +.+++++|+ ++. ++.+++|++ .+++...+..+
T Consensus 93 spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 171 (297)
T 2ojh_A 93 SPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG 171 (297)
T ss_dssp CTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCS
T ss_pred CCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccC
Confidence 99999999998 33445555 555554 334443333443 457888877 454 888888874 55666677778
Q ss_pred CCCEEEEEEeCC--EEEEEc-CCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee
Q 021744 229 VGQVYAMAVGND--LLFAGT-QDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV 291 (308)
Q Consensus 229 ~~~v~~~~~~~~--~l~~g~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~ 291 (308)
...+.+++|+|+ +|+.++ .++.+++|++.... ..+..+..|...+.. +|+|++++|+...
T Consensus 172 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 235 (297)
T 2ojh_A 172 EGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG---SSVERITDSAYGDWFPHPSPSGDKVVFVS 235 (297)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS---SCEEECCCCSEEEEEEEECTTSSEEEEEE
T ss_pred CCccccceECCCCCEEEEEecCCCCccEEEECCCC---CCcEEEecCCcccCCeEECCCCCEEEEEE
Confidence 889999999999 555544 68999999987432 455667777778888 9999999987544
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.83 E-value=6e-19 Score=170.95 Aligned_cols=242 Identities=8% Similarity=0.017 Sum_probs=178.2
Q ss_pred CceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc-eeEEecCCCe-eeccCCCcEEEEECCCCCCccccc
Q 021744 27 GLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA-AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINN 104 (308)
Q Consensus 27 ~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~-~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~ 104 (308)
.++++++.|+++++|...... .....+.+|... ..+|+|+|+. +.+ .++.|.+||++..+.. ..
T Consensus 215 ~l~~~~~~dg~~~l~~~~~~g-----------~~~~~l~~~~~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~l~--~l 280 (1045)
T 1k32_A 215 RIYFITDIDGFGQIYSTDLDG-----------KDLRKHTSFTDYYPRHLNTDGRRILFS-KGGSIYIFNPDTEKIE--KI 280 (1045)
T ss_dssp EEEEEECTTSSCEEEEEETTS-----------CSCEECCCCCSSCEEEEEESSSCEEEE-ETTEEEEECTTTCCEE--EC
T ss_pred EEEEEEeccCceEEEEEeCCC-----------CcceEecCCCCcceeeEcCCCCEEEEE-eCCEEEEecCCceEee--ee
Confidence 566677888999999865320 011112223333 6799999998 665 5899999998433221 11
Q ss_pred ce-----------eeeeeeeeeee-cCCce-EEeeCCCeEEEEEcCCCceeeeEeeCccc-ceEEEEEeCCCCEEEEeeC
Q 021744 105 RA-----------VIKTDILCRNW-VQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQK-VVSGITLPSGSDKLYSGSK 170 (308)
Q Consensus 105 ~~-----------~~~~~~~~~~~-~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~s~ 170 (308)
.. +...+..+.|+ |+|.. ++++ ++.|++|++.++ + ...+..|.. .+..++|+ +++.++.++.
T Consensus 281 ~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~-~-~~~~~~~~~~~~~~~~~s-dg~~l~~~s~ 356 (1045)
T 1k32_A 281 EIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGT-Y-VLKVPEPLRIRYVRRGGD-TKVAFIHGTR 356 (1045)
T ss_dssp CCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSS-B-EEECSCCSCEEEEEECSS-SEEEEEEEET
T ss_pred ccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCC-c-eEEccCCCcceEEeeeEc-CCCeEEEEEC
Confidence 11 23357889999 99976 4444 899999999877 3 334666777 89999999 9999999998
Q ss_pred CCcEE-EEeCCCCeEEEEEeCCCeeEE--EEcCCCEEEEEc-CCcEEEEEcCCCceee-eeCCCCCEEEEEEeCC--EEE
Q 021744 171 DETVR-VWDCASGQCAGVINLGGEVGC--MISEGPWIFIGV-TNFVKAWNTQTNTDLS-LSGPVGQVYAMAVGND--LLF 243 (308)
Q Consensus 171 dg~v~-~wd~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~-d~~i~~wd~~~~~~~~-~~~~~~~v~~~~~~~~--~l~ 243 (308)
+..+. +||+.+++......+...+.. ++|++++|+++. ++.|++||+.+++... ...|...+.+++|+|| +|+
T Consensus 357 ~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la 436 (1045)
T 1k32_A 357 EGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIA 436 (1045)
T ss_dssp TEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEE
T ss_pred CCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEE
Confidence 88898 999988765433334344444 368899998766 8899999999998874 4488889999999999 777
Q ss_pred EEcCCC----------eEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee
Q 021744 244 AGTQDG----------AILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV 291 (308)
Q Consensus 244 ~g~~dg----------~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~ 291 (308)
+++.++ .|++||+.++ + +..+..|...+.. +|+|||++|+...
T Consensus 437 ~~~~~~~~~~~~~~~~~i~l~d~~~g----~-~~~l~~~~~~~~~~~~spdG~~l~~~s 490 (1045)
T 1k32_A 437 YGFPLKHGETDGYVMQAIHVYDMEGR----K-IFAATTENSHDYAPAFDADSKNLYYLS 490 (1045)
T ss_dssp EEEEECSSTTCSCCEEEEEEEETTTT----E-EEECSCSSSBEEEEEECTTSCEEEEEE
T ss_pred EEecCccccccCCCCCeEEEEECCCC----c-EEEeeCCCcccCCceEcCCCCEEEEEe
Confidence 776544 8999999985 4 5667778878888 9999999888544
No 147
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.83 E-value=3.8e-18 Score=145.20 Aligned_cols=220 Identities=9% Similarity=0.064 Sum_probs=147.7
Q ss_pred eeEEecCCCe-eecc--CCCcEEEEECCCCCCccccc-ceeeeeeeeeeeecCCce-EEee-CCCeEEEEEcCC-Cc-ee
Q 021744 71 AKRFANNTWG-RNNN--FNNHSNNYRAGNSKNSNINN-RAVIKTDILCRNWVQGNC-MYGE-KCKFLHSWTVGD-GF-KL 142 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~--~d~~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~g~-~d~~i~iwd~~~-~~-~~ 142 (308)
.++|+|+|+. +++. .++.|++|++.+++...... ..+...+..++++|++.. ++++ .++.|.+|++.. +. +.
T Consensus 44 ~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~ 123 (347)
T 3hfq_A 44 YLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTL 123 (347)
T ss_dssp CEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEE
T ss_pred eEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeee
Confidence 6999999988 5543 37899999996654321111 223445778899999975 5555 789999999963 21 22
Q ss_pred eeEeeC---------cccceEEEEEeCCCCEEEEeeCCCcEEEEeCC-CCeEEEE--Ee--CCCeeE--EEEcCCCEEEE
Q 021744 143 LTQLEG---------HQKVVSGITLPSGSDKLYSGSKDETVRVWDCA-SGQCAGV--IN--LGGEVG--CMISEGPWIFI 206 (308)
Q Consensus 143 ~~~~~~---------h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~-~~~~~~~--~~--~~~~v~--~~~~~~~~l~~ 206 (308)
+..+.. +...+.+++|+|+++++++...++.|.+|++. +++.... +. ...... .+.++++++++
T Consensus 124 ~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v 203 (347)
T 3hfq_A 124 TDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFL 203 (347)
T ss_dssp EEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred cceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEE
Confidence 333321 12248899999999966777778999999998 5543322 22 121222 44688997765
Q ss_pred -Ec-CCcEEEEEcCC--Ccee---eeeCCC------CCEEEEEEeCC--EE-EEEcCCCeEEEEEcCCCCcccccceecc
Q 021744 207 -GV-TNFVKAWNTQT--NTDL---SLSGPV------GQVYAMAVGND--LL-FAGTQDGAILAWKFNVTTNCFEPAASLK 270 (308)
Q Consensus 207 -~~-d~~i~~wd~~~--~~~~---~~~~~~------~~v~~~~~~~~--~l-~~g~~dg~i~iwd~~~~~~~~~~~~~~~ 270 (308)
+. ++.|.+|++.. ++.. .+.... ..+..++|+|+ +| ++...++.|.+|++.... ..+.+..+.
T Consensus 204 ~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g-~~~~~~~~~ 282 (347)
T 3hfq_A 204 AGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG-HLTLIQQIS 282 (347)
T ss_dssp EETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG-CEEEEEEEE
T ss_pred EeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC-cEEEeEEEe
Confidence 44 78999999874 4432 222222 45889999999 45 566678999999997321 124555666
Q ss_pred ccCCCeEE-EEecCCCeEEEee
Q 021744 271 VHTDSNRA-HFSRDVTSLLGSV 291 (308)
Q Consensus 271 ~~~~~v~~-~~s~d~~~l~~s~ 291 (308)
.+...+.. +|+|||++|+++.
T Consensus 283 ~~~~~~~~~~~spdg~~l~v~~ 304 (347)
T 3hfq_A 283 TEGDFPRDFDLDPTEAFVVVVN 304 (347)
T ss_dssp CSSSCCCEEEECTTSSEEEEEE
T ss_pred cCCCCcCeEEECCCCCEEEEEE
Confidence 66666677 9999999888665
No 148
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.82 E-value=9.8e-18 Score=141.84 Aligned_cols=248 Identities=9% Similarity=0.062 Sum_probs=153.4
Q ss_pred CCceEEecCC-CeEEEeecC--CCCCCCCCcccccCCCCCCccccccc-eeEEecCCCe-e-eccCCCcEEEEECCCCCC
Q 021744 26 GGLSTADTRQ-KVCNYWRAG--KCNRFPCPYLHRELPLPPAATANGAA-AKRFANNTWG-R-NNNFNNHSNNYRAGNSKN 99 (308)
Q Consensus 26 ~~~~~s~s~d-~~i~~W~~~--~~~~~~~~~~~~~~~~~~~~~gh~~~-~i~~s~~g~~-~-s~~~d~~i~vwd~~~~~~ 99 (308)
+.++++++.+ +.|++|+.. .+.. ..+. ....+... .++|+|+++. + ++..++.|++||+..+..
T Consensus 49 g~~l~~~~~~~~~v~~~~~~~~~~~~---~~~~-------~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~ 118 (343)
T 1ri6_A 49 KRYLYVGVRPEFRVLAYRIAPDDGAL---TFAA-------ESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLP 118 (343)
T ss_dssp SSEEEEEETTTTEEEEEEECTTTCCE---EEEE-------EEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEE
T ss_pred CCEEEEeecCCCeEEEEEecCCCCce---eecc-------ccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcc
Confidence 5556666665 999999987 3310 0000 00111122 7999999997 4 445589999999953221
Q ss_pred ccc-ccceeeeeeeeeeeecCCce-EEee-CCCeEEEEEcCC-Cceeee----EeeC-cccceEEEEEeCCCCEEEEe-e
Q 021744 100 SNI-NNRAVIKTDILCRNWVQGNC-MYGE-KCKFLHSWTVGD-GFKLLT----QLEG-HQKVVSGITLPSGSDKLYSG-S 169 (308)
Q Consensus 100 ~~~-~~~~~~~~~~~~~~~~~~~~-~~g~-~d~~i~iwd~~~-~~~~~~----~~~~-h~~~v~~~~~~~~~~~l~s~-s 169 (308)
... ........+..+.|+|++.. ++++ .++.|++||+.+ + +... .+.. ....+..++|+|++++++.+ .
T Consensus 119 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~ 197 (343)
T 1ri6_A 119 VGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG-HLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNE 197 (343)
T ss_dssp EEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTS-CEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEET
T ss_pred ccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCC-ceeeecccccccCCCCCcceEEECCCCCEEEEEeC
Confidence 110 11111223777889999965 4444 899999999987 5 3321 2222 23478899999999977544 5
Q ss_pred CCCcEEEEeCCC--CeE--EEEEe-CC------Cee--EEEEcCCCEEEE-Ec-CCcEEEEEcC--CCc--ee-eeeCCC
Q 021744 170 KDETVRVWDCAS--GQC--AGVIN-LG------GEV--GCMISEGPWIFI-GV-TNFVKAWNTQ--TNT--DL-SLSGPV 229 (308)
Q Consensus 170 ~dg~v~~wd~~~--~~~--~~~~~-~~------~~v--~~~~~~~~~l~~-~~-d~~i~~wd~~--~~~--~~-~~~~~~ 229 (308)
.++.|.+|++.. ++. ...+. .. ..+ .++.+++++|++ +. ++.|.+||+. +++ .+ .+..+.
T Consensus 198 ~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~ 277 (343)
T 1ri6_A 198 LNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTET 277 (343)
T ss_dssp TTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSS
T ss_pred CCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCC
Confidence 889999999953 433 33332 11 112 234678888774 43 8899999998 333 23 333333
Q ss_pred CCEEEEEEeCC--EEEEEc-CCCeEEEEEcCCCCcccccceeccccCCCeEEEEecCCC
Q 021744 230 GQVYAMAVGND--LLFAGT-QDGAILAWKFNVTTNCFEPAASLKVHTDSNRAHFSRDVT 285 (308)
Q Consensus 230 ~~v~~~~~~~~--~l~~g~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~s~d~~ 285 (308)
.+.+++|+|+ +|++++ .++.|.+|++.......+.+..+.....+...+|.++..
T Consensus 278 -~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 278 -QPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAHEG 335 (343)
T ss_dssp -SCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSCCEEEEEEEC-
T ss_pred -ccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccCCCCeeEEEEcccC
Confidence 3889999998 666666 689999996653322124455555544555557777643
No 149
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.82 E-value=1.8e-18 Score=151.74 Aligned_cols=185 Identities=9% Similarity=-0.057 Sum_probs=130.6
Q ss_pred eeEEecCCCe-e----eccCCCcEEEEECCCC-----CC---c--ccccceeeeeeeeeeeecC-Cce-EEeeCCCeEEE
Q 021744 71 AKRFANNTWG-R----NNNFNNHSNNYRAGNS-----KN---S--NINNRAVIKTDILCRNWVQ-GNC-MYGEKCKFLHS 133 (308)
Q Consensus 71 ~i~~s~~g~~-~----s~~~d~~i~vwd~~~~-----~~---~--~~~~~~~~~~~~~~~~~~~-~~~-~~g~~d~~i~i 133 (308)
+++|+|+|++ + +++.|++|+|||+.+. +. + ......|...+..+.|+|+ +.. ++++.|+.|++
T Consensus 97 ~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~i 176 (434)
T 2oit_A 97 HLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAV 176 (434)
T ss_dssp EEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred EEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEE
Confidence 8999999999 7 8999999999998644 11 1 1123446777999999998 554 88999999999
Q ss_pred EEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe-CC-------CeeEEE--EcCCCE
Q 021744 134 WTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN-LG-------GEVGCM--ISEGPW 203 (308)
Q Consensus 134 wd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-~~-------~~v~~~--~~~~~~ 203 (308)
||++++ .......+|...|.+++|+|++++|++|+.||+|++||++ ++....+. +. ..+.++ .+++.+
T Consensus 177 wD~~~~-~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~ 254 (434)
T 2oit_A 177 LQVTET-VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVF 254 (434)
T ss_dssp EEESSS-EEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEE
T ss_pred EEcCCC-cceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceE
Confidence 999988 6666677899999999999999999999999999999998 66666554 11 145555 355566
Q ss_pred EEEEc--CC------cEEEEEcCCCce---e---eee-------CCCCCEEEEEEeCC---EEEEEcCCCeEEEEEcC
Q 021744 204 IFIGV--TN------FVKAWNTQTNTD---L---SLS-------GPVGQVYAMAVGND---LLFAGTQDGAILAWKFN 257 (308)
Q Consensus 204 l~~~~--d~------~i~~wd~~~~~~---~---~~~-------~~~~~v~~~~~~~~---~l~~g~~dg~i~iwd~~ 257 (308)
+++.. +| .+++||+++.+. . .+. ....+...+.+.++ .+++.+....|.+....
T Consensus 255 l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~ 332 (434)
T 2oit_A 255 AIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQ 332 (434)
T ss_dssp EEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEEC
T ss_pred EEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEec
Confidence 65422 43 389999986521 1 111 12223333444465 45555556666666543
No 150
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.81 E-value=6.2e-18 Score=157.68 Aligned_cols=252 Identities=10% Similarity=0.024 Sum_probs=165.0
Q ss_pred CCceEEecCC---------CeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEE
Q 021744 26 GGLSTADTRQ---------KVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYR 93 (308)
Q Consensus 26 ~~~~~s~s~d---------~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd 93 (308)
|.+||+++.+ +.+++||..++.. . +.. ...+|... .++|||||+. |.++. ++|++||
T Consensus 72 g~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~---~------~l~-~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~ 140 (723)
T 1xfd_A 72 REYALFSYNVEPIYQHSYTGYYVLSKIPHGDP---Q------SLD-PPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCA 140 (723)
T ss_dssp SSEEEEEESCCCCSSSCCCSEEEEEESSSCCC---E------ECC-CTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEES
T ss_pred CCEEEEEecCccceeecceeeEEEEECCCCce---E------ecc-CCccccccccccEECCCCCEEEEEEC-CeEEEEE
Confidence 6678888764 7888999987711 0 011 11233322 6899999998 66665 7899999
Q ss_pred CCCCCCcccccceee-----------------eeeeeeeeecCCce-EEeeCC---------------------------
Q 021744 94 AGNSKNSNINNRAVI-----------------KTDILCRNWVQGNC-MYGEKC--------------------------- 128 (308)
Q Consensus 94 ~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~-~~g~~d--------------------------- 128 (308)
+.+++.......... ..+..+.|+|+|.. ++++.+
T Consensus 141 ~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (723)
T 1xfd_A 141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPK 220 (723)
T ss_dssp SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCB
T ss_pred CCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCC
Confidence 987754322111111 01267899999976 555433
Q ss_pred -------CeEEEEEcCCCceeeeEeeCc------ccceEEEEEeCCCCEEEEeeC----CCcEEEEeCCCCeEEEEEe--
Q 021744 129 -------KFLHSWTVGDGFKLLTQLEGH------QKVVSGITLPSGSDKLYSGSK----DETVRVWDCASGQCAGVIN-- 189 (308)
Q Consensus 129 -------~~i~iwd~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~s~s~----dg~v~~wd~~~~~~~~~~~-- 189 (308)
..|++||+.++ +....+..+ ...+..++|+||++++++.+. +..|++||+.+++....+.
T Consensus 221 ~G~~~~~~~l~~~d~~~~-~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~ 299 (723)
T 1xfd_A 221 AGSENPSISLHVIGLNGP-THDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDE 299 (723)
T ss_dssp TTSCCCEEEEEEEESSSS-CCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEE
T ss_pred CCCCCCeeEEEEEECCCC-ceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEec
Confidence 28999999888 444555543 678899999999998876653 3579999999998776654
Q ss_pred CCCe------eEEEEcCCCEEEE--Ec-CC------cEEEEE-cCCCc---eeeeeCCCCCEEE-EEEeCC--EEEE-Ec
Q 021744 190 LGGE------VGCMISEGPWIFI--GV-TN------FVKAWN-TQTNT---DLSLSGPVGQVYA-MAVGND--LLFA-GT 246 (308)
Q Consensus 190 ~~~~------v~~~~~~~~~l~~--~~-d~------~i~~wd-~~~~~---~~~~~~~~~~v~~-~~~~~~--~l~~-g~ 246 (308)
+... ...++++++.|+. +. ++ .|.+|| ..+++ ...+..+...+.. ++|+|+ .|+. +.
T Consensus 300 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~ 379 (723)
T 1xfd_A 300 SEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLST 379 (723)
T ss_dssp CSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEES
T ss_pred cCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEc
Confidence 2222 2345788986663 33 56 577778 45555 4455544444554 699999 5554 44
Q ss_pred CC--CeEEEEEcCCCCcccccceeccc---cCCCeEE-EEecCCCeEEEee
Q 021744 247 QD--GAILAWKFNVTTNCFEPAASLKV---HTDSNRA-HFSRDVTSLLGSV 291 (308)
Q Consensus 247 ~d--g~i~iwd~~~~~~~~~~~~~~~~---~~~~v~~-~~s~d~~~l~~s~ 291 (308)
.+ +.+++|++..... .....+.. |...+.. +|+|||++++..+
T Consensus 380 ~~~~~~~~l~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 380 EDLPRRRQLYSANTVGN--FNRQCLSCDLVENCTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp SSCTTCCEEEEECSSTT--CCCBCSSTTSSSSCCCCEEEECTTSSEEEEEC
T ss_pred CCCCcceEEEEEeCCCC--CCcceecccccCCCCeEEEEECCCCCEEEEEc
Confidence 44 8899999875421 12333432 5666777 9999999988654
No 151
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.81 E-value=2e-18 Score=157.24 Aligned_cols=245 Identities=8% Similarity=-0.043 Sum_probs=165.3
Q ss_pred CCceEEecC-CCeEEEeecCCCCCCCCCcccccCCCCCCccccc-cc--eeEEecCCCe-eeccC---CCcEEEEECCC-
Q 021744 26 GGLSTADTR-QKVCNYWRAGKCNRFPCPYLHRELPLPPAATANG-AA--AKRFANNTWG-RNNNF---NNHSNNYRAGN- 96 (308)
Q Consensus 26 ~~~~~s~s~-d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~-~~--~i~~s~~g~~-~s~~~---d~~i~vwd~~~- 96 (308)
|..||+++. |++++||+...+ .+ ..+..|. .. .++|+|| +. ++++. +...++|.+..
T Consensus 33 G~~la~~s~~~g~~~lw~~~~g-----------~~--~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 33 GDKLLVVGFSEGSVNAYLYDGG-----------ET--VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp TTEEEEEEEETTEEEEEEEETT-----------EE--EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred CCeEEEEEccCCceeEEEEcCC-----------Cc--EeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 567888776 999999998655 11 1111222 22 6889999 66 65554 55567766643
Q ss_pred --CCCcccccceeeeeeeeeeeecCCc--eEEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCC-
Q 021744 97 --SKNSNINNRAVIKTDILCRNWVQGN--CMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKD- 171 (308)
Q Consensus 97 --~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d- 171 (308)
+... .... ........+++++. .++.+.++.+.+||+.++ +...... +.. .+++|+|||++|++++.+
T Consensus 99 ~~g~~~--~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g-~~~~l~~-~~~--~~~~~spDG~~la~~~~~~ 171 (582)
T 3o4h_A 99 RPGEEQ--RLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGG-GLRELAR-LPG--FGFVSDIRGDLIAGLGFFG 171 (582)
T ss_dssp STTCCE--ECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETT-EEEEEEE-ESS--CEEEEEEETTEEEEEEEEE
T ss_pred CCCccc--cccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCC-cEEEeec-CCC--ceEEECCCCCEEEEEEEcC
Confidence 2111 1111 11233457788874 344444455559999988 4444333 333 889999999999988877
Q ss_pred ---CcEEEEeCCCCeEEEEEeCCCeeEE--EEcCCCEEEEEc-CC--cEEEEEcCCCceeeeeCCCCCEEEEE-------
Q 021744 172 ---ETVRVWDCASGQCAGVINLGGEVGC--MISEGPWIFIGV-TN--FVKAWNTQTNTDLSLSGPVGQVYAMA------- 236 (308)
Q Consensus 172 ---g~v~~wd~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~-d~--~i~~wd~~~~~~~~~~~~~~~v~~~~------- 236 (308)
..|++||+.+++......+...+.. ++|||++|+++. ++ .|++||+.+++...+..|...+..++
T Consensus 172 ~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (582)
T 3o4h_A 172 GGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWL 251 (582)
T ss_dssp TTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEE
T ss_pred CCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccce
Confidence 7899999998887644445555554 368999999655 77 89999999988775566766666666
Q ss_pred -EeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee----ceEEEEeecC
Q 021744 237 -VGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV----SFIMFIGQNN 301 (308)
Q Consensus 237 -~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~----s~~i~~~~~~ 301 (308)
|+|| ++++++.|+.+++|++ + +... .....+.. +|+ ++++++... ...+|.....
T Consensus 252 ~~spdg~~~~~~~~~g~~~l~~~--g----~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 252 GYLPDGRLAVVARREGRSAVFID--G----ERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp EECTTSCEEEEEEETTEEEEEET--T----EEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred eEcCCCcEEEEEEcCCcEEEEEE--C----Ceec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCC
Confidence 9999 8889999999999999 4 3333 23356777 999 888887544 3556766543
No 152
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.80 E-value=7.8e-18 Score=142.10 Aligned_cols=227 Identities=11% Similarity=0.063 Sum_probs=153.3
Q ss_pred CceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccc-cc-eeEEecCCCe-eecc------------CCCcEEE
Q 021744 27 GLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANG-AA-AKRFANNTWG-RNNN------------FNNHSNN 91 (308)
Q Consensus 27 ~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~-~~-~i~~s~~g~~-~s~~------------~d~~i~v 91 (308)
.++++++.++.|++||..++.. +. ..+...+ ..|. .. .++|+|+|+. +++. .++.|.+
T Consensus 47 ~l~v~~~~~~~v~~~d~~~~~~-----~~-~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v 119 (337)
T 1pby_B 47 IAYATVNKSESLVKIDLVTGET-----LG-RIDLSTP-EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVAL 119 (337)
T ss_dssp EEEEEETTTTEEEEEETTTCCE-----EE-EEECCBT-TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEE
T ss_pred EEEEEeCCCCeEEEEECCCCCe-----Ee-eEEcCCc-ccccccccceEECCCCCEEEEEecccccccccccccCceEEE
Confidence 4567778889999999887621 00 0111100 0011 12 6899999988 6664 5799999
Q ss_pred EECCCCCCcccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCC
Q 021744 92 YRAGNSKNSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKD 171 (308)
Q Consensus 92 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d 171 (308)
||+.+++.... ......+..+.++|++..+... ++.|++||+.++ +....+..+.. ...+.|+|++..++..+..
T Consensus 120 ~d~~~~~~~~~--~~~~~~~~~~~~s~dg~~l~~~-~~~i~~~d~~~~-~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~ 194 (337)
T 1pby_B 120 YDAETLSRRKA--FEAPRQITMLAWARDGSKLYGL-GRDLHVMDPEAG-TLVEDKPIQSW-EAETYAQPDVLAVWNQHES 194 (337)
T ss_dssp EETTTTEEEEE--EECCSSCCCEEECTTSSCEEEE-SSSEEEEETTTT-EEEEEECSTTT-TTTTBCCCBCCCCCCCCTT
T ss_pred EECCCCcEEEE--EeCCCCcceeEECCCCCEEEEe-CCeEEEEECCCC-cEeeeeecccc-CCCceeCCCccEEeeeccC
Confidence 99987654321 1122346778899999753333 689999999988 66666654431 1133788988876544432
Q ss_pred -C-----------------------cEEEEeCCCCeEEEEEe---CCCeeE--EEEcCCCEEEEEcCCcEEEEEcCCCce
Q 021744 172 -E-----------------------TVRVWDCASGQCAGVIN---LGGEVG--CMISEGPWIFIGVTNFVKAWNTQTNTD 222 (308)
Q Consensus 172 -g-----------------------~v~~wd~~~~~~~~~~~---~~~~v~--~~~~~~~~l~~~~d~~i~~wd~~~~~~ 222 (308)
+ .|.+||+.+++.. .+. +...+. .+.+++++++++ ++.|.+||+.+++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~~~ 272 (337)
T 1pby_B 195 SGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKNAS 272 (337)
T ss_dssp TTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEEETTTTEE
T ss_pred CCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe-CCeEEEEECCCCcC
Confidence 2 4689999998775 333 333333 346889998877 89999999999887
Q ss_pred eeeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccc
Q 021744 223 LSLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKV 271 (308)
Q Consensus 223 ~~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~ 271 (308)
.........+.+++|+|+ +|++++.++.|++||+.++ +.+..+..
T Consensus 273 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~----~~~~~~~~ 319 (337)
T 1pby_B 273 IKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL----EKKGQVDL 319 (337)
T ss_dssp EEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTC----CEEEEEEC
T ss_pred cceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCC----cEEEEEEc
Confidence 733333456789999998 7888888999999999987 55555543
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.80 E-value=8.6e-18 Score=142.61 Aligned_cols=219 Identities=6% Similarity=-0.007 Sum_probs=152.4
Q ss_pred eEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce--EEeeCCCeEEEEEcCCCceeeeEeeC
Q 021744 72 KRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC--MYGEKCKFLHSWTVGDGFKLLTQLEG 148 (308)
Q Consensus 72 i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~d~~i~iwd~~~~~~~~~~~~~ 148 (308)
+++++++.. ++++.+++|++||+.+++............+..+.+++++.. +++..++.|.+||+.++ +.+..+..
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~-~~~~~~~~ 83 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC-KNTFHANL 83 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTT-EEEEEEES
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCC-cEEEEEEc
Confidence 567778878 999999999999998876543222111114677889999964 55567899999999988 66666653
Q ss_pred c------ccceEEEEEeCCCCEEEEeeCC------------CcEEEEeCCCCe---EEEEEeCCCeeEE--EEcCCCEEE
Q 021744 149 H------QKVVSGITLPSGSDKLYSGSKD------------ETVRVWDCASGQ---CAGVINLGGEVGC--MISEGPWIF 205 (308)
Q Consensus 149 h------~~~v~~~~~~~~~~~l~s~s~d------------g~v~~wd~~~~~---~~~~~~~~~~v~~--~~~~~~~l~ 205 (308)
+ ...+..++|+|+++++++++.+ +.|.+||+.+++ .+..+.....+.+ +.++++ ++
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~ 162 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LY 162 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EE
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EE
Confidence 2 2347899999999999988865 899999998843 3444554444443 457888 55
Q ss_pred EEcCCcEEEEEcCCCcee-eeeCCC-------------------------------------------------------
Q 021744 206 IGVTNFVKAWNTQTNTDL-SLSGPV------------------------------------------------------- 229 (308)
Q Consensus 206 ~~~d~~i~~wd~~~~~~~-~~~~~~------------------------------------------------------- 229 (308)
++ ++.|.+||+.+++.. .+..+.
T Consensus 163 ~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 241 (349)
T 1jmx_B 163 VA-GPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLK 241 (349)
T ss_dssp EE-SSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETT
T ss_pred Ec-cCcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEecc
Confidence 54 344999999988765 332211
Q ss_pred -------------CCEEEEEEeC-C--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee-
Q 021744 230 -------------GQVYAMAVGN-D--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV- 291 (308)
Q Consensus 230 -------------~~v~~~~~~~-~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~- 291 (308)
..+.+++++| + +++++ ++.|.+||+.++ +.+..+.... .+.. +|+||+++|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~----~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~ 314 (349)
T 1jmx_B 242 TGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQR----KLIKAANLDH-TYYCVAFDKKGDKLYLGGT 314 (349)
T ss_dssp TCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTT----EEEEEEECSS-CCCEEEECSSSSCEEEESB
T ss_pred CCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccC----eEEEEEcCCC-CccceEECCCCCEEEEecC
Confidence 1345677788 7 66666 889999999986 5555555333 3445 9999998887544
Q ss_pred ceEEEEeec
Q 021744 292 SFIMFIGQN 300 (308)
Q Consensus 292 s~~i~~~~~ 300 (308)
+..|+++..
T Consensus 315 ~~~v~v~d~ 323 (349)
T 1jmx_B 315 FNDLAVFNP 323 (349)
T ss_dssp SSEEEEEET
T ss_pred CCeEEEEec
Confidence 455555553
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.79 E-value=7.6e-18 Score=163.24 Aligned_cols=227 Identities=9% Similarity=-0.002 Sum_probs=165.9
Q ss_pred cccccc--eeEEecCCCe-eeccCCCcEEEEECCC-CCCcccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCc
Q 021744 65 TANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGN-SKNSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGF 140 (308)
Q Consensus 65 ~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~ 140 (308)
.+|... ++.|+++ .. ++++.|++++||.++. +... .....+. .+....|+|+|..+....++.|++|++...
T Consensus 200 ~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~-~~l~~~~-~~~~~~~SpDG~~la~~~~~~i~~~d~~~~- 275 (1045)
T 1k32_A 200 VDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDL-RKHTSFT-DYYPRHLNTDGRRILFSKGGSIYIFNPDTE- 275 (1045)
T ss_dssp ECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSC-EECCCCC-SSCEEEEEESSSCEEEEETTEEEEECTTTC-
T ss_pred cCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcc-eEecCCC-CcceeeEcCCCCEEEEEeCCEEEEecCCce-
Confidence 355555 7888888 55 7888899999998753 2111 1122222 345568999997644446999999999544
Q ss_pred eeeeEeeC-----------cccceEEEEEe-CCCCEEEEeeCCCcEEEEeCCCCeEEEEEeCCC-eeEEE-EcCCCEEEE
Q 021744 141 KLLTQLEG-----------HQKVVSGITLP-SGSDKLYSGSKDETVRVWDCASGQCAGVINLGG-EVGCM-ISEGPWIFI 206 (308)
Q Consensus 141 ~~~~~~~~-----------h~~~v~~~~~~-~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~~~-~v~~~-~~~~~~l~~ 206 (308)
+ +..+.+ |...+..++|+ |+++.|++++ ++.+.+|++.+++......+.. .+..+ +.+++.++.
T Consensus 276 ~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~sdg~~l~~ 353 (1045)
T 1k32_A 276 K-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGDTKVAFIH 353 (1045)
T ss_dssp C-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSSSEEEEEE
T ss_pred E-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEcCCCeEEE
Confidence 3 335554 44578999999 9999998887 7899999999887554333444 45544 237777776
Q ss_pred Ec-CCcEE-EEEcCCCceeeeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEe
Q 021744 207 GV-TNFVK-AWNTQTNTDLSLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFS 281 (308)
Q Consensus 207 ~~-d~~i~-~wd~~~~~~~~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s 281 (308)
++ +..+. +||+.+++...+..|...+..++|+|+ +|++++.++.|++||+.++ +....+..|...+.. +|+
T Consensus 354 ~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg----~~~~~~~~~~~~v~~~~~S 429 (1045)
T 1k32_A 354 GTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG----KPTVIERSREAMITDFTIS 429 (1045)
T ss_dssp EETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTC----CEEEEEECSSSCCCCEEEC
T ss_pred EECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCC----ceEEeccCCCCCccceEEC
Confidence 55 66788 899998887766678889999999999 8999999999999999986 445555578888888 999
Q ss_pred cCCCeEEEee-c----------eEEEEeecC
Q 021744 282 RDVTSLLGSV-S----------FIMFIGQNN 301 (308)
Q Consensus 282 ~d~~~l~~s~-s----------~~i~~~~~~ 301 (308)
|||++|+.+. . ..|+++...
T Consensus 430 pDG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 430 DNSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp TTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred CCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 9999998554 2 367776543
No 155
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.79 E-value=7.9e-18 Score=153.27 Aligned_cols=210 Identities=9% Similarity=-0.046 Sum_probs=146.9
Q ss_pred eeEEecCCCe-eeccC-CCcEEEEECCCCCCcccccceee-eeeeeeeeecCCce-EEeeC---CCeEEEEEcCC--Cce
Q 021744 71 AKRFANNTWG-RNNNF-NNHSNNYRAGNSKNSNINNRAVI-KTDILCRNWVQGNC-MYGEK---CKFLHSWTVGD--GFK 141 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~-d~~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~g~~---d~~i~iwd~~~--~~~ 141 (308)
.++|+|||+. |+++. |++++||++++++.. ....+. ..+....|+|+ .. ++++. +...++|.+.. ...
T Consensus 26 ~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~--~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~ 102 (582)
T 3o4h_A 26 SLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV--KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGE 102 (582)
T ss_dssp EEEEEETTTEEEEEEEETTEEEEEEEETTEEE--ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTC
T ss_pred eeecCCCCCeEEEEEccCCceeEEEEcCCCcE--eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCc
Confidence 7899999999 77776 999999998655432 222333 45788889988 55 33333 45556655433 212
Q ss_pred eeeEeeCcccceEEEEEeCCCCE--EEEeeCCCcEEEEeCCCCeEEEEEeCCCeeEEEEcCCCEEEEEc-C----CcEEE
Q 021744 142 LLTQLEGHQKVVSGITLPSGSDK--LYSGSKDETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGV-T----NFVKA 214 (308)
Q Consensus 142 ~~~~~~~h~~~v~~~~~~~~~~~--l~s~s~dg~v~~wd~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-d----~~i~~ 214 (308)
.. .+... ..+...+|+|+++. +++++. +.+.+||+.+++..........-..++|+|++|+.++ + ..|++
T Consensus 103 ~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~-~~~~l~d~~~g~~~~l~~~~~~~~~~spDG~~la~~~~~~~~~~~i~~ 179 (582)
T 3o4h_A 103 EQ-RLEAV-KPMRILSGVDTGEAVVFTGATE-DRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFT 179 (582)
T ss_dssp CE-ECTTS-CSBEEEEEEECSSCEEEEEECS-SCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEE
T ss_pred cc-cccCC-CCceeeeeCCCCCeEEEEecCC-CCceEEEccCCcEEEeecCCCceEEECCCCCEEEEEEEcCCCCeEEEE
Confidence 22 33322 23446678887753 444444 4555999999987766665543345579999999544 4 68999
Q ss_pred EEcCCCceeeeeCCCCCEEEEEEeCC--EEEEEcCCC--eEEEEEcCCCCcccccceeccccCCCeEE-E--------Ee
Q 021744 215 WNTQTNTDLSLSGPVGQVYAMAVGND--LLFAGTQDG--AILAWKFNVTTNCFEPAASLKVHTDSNRA-H--------FS 281 (308)
Q Consensus 215 wd~~~~~~~~~~~~~~~v~~~~~~~~--~l~~g~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~--------~s 281 (308)
||+.+++...+..|...+.+++|+|| .|+++..++ .|++||+.++ +.. .+..|...+.. + |+
T Consensus 180 ~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~s 254 (582)
T 3o4h_A 180 SNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDG----SVE-DLELPSKDFSSYRPTAITWLGYL 254 (582)
T ss_dssp EETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTC----CEE-ECCCSCSHHHHHCCSEEEEEEEC
T ss_pred EcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCC----cEE-EccCCCcChhhhhhccccceeEc
Confidence 99999998888889999999999999 788888888 8999999986 333 56667666666 6 99
Q ss_pred cCCCeEEEee
Q 021744 282 RDVTSLLGSV 291 (308)
Q Consensus 282 ~d~~~l~~s~ 291 (308)
|||.+++++.
T Consensus 255 pdg~~~~~~~ 264 (582)
T 3o4h_A 255 PDGRLAVVAR 264 (582)
T ss_dssp TTSCEEEEEE
T ss_pred CCCcEEEEEE
Confidence 9996555443
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.78 E-value=2e-16 Score=135.36 Aligned_cols=225 Identities=9% Similarity=0.052 Sum_probs=139.9
Q ss_pred eeEEecCCCe-eeccCC----CcEEEEECCC--CCCcccccce-eeeeeeeeeeecCCce--EEeeCCCeEEEEEcCCCc
Q 021744 71 AKRFANNTWG-RNNNFN----NHSNNYRAGN--SKNSNINNRA-VIKTDILCRNWVQGNC--MYGEKCKFLHSWTVGDGF 140 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d----~~i~vwd~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~g~~d~~i~iwd~~~~~ 140 (308)
.++|+|+|++ ++++.+ +.|++|+++. ++........ +......+.+ ++.. ++...++.|.+|++....
T Consensus 54 ~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g 131 (361)
T 3scy_A 54 YLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDG 131 (361)
T ss_dssp SEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTS
T ss_pred eEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCC
Confidence 6899999998 777765 7999999864 3221111111 1122333444 6654 334468999999997542
Q ss_pred eeeeEe------eC--------cccceEEEEEeCCCCEEEEee-CCCcEEEEeCCCCeE------E------EEEe--CC
Q 021744 141 KLLTQL------EG--------HQKVVSGITLPSGSDKLYSGS-KDETVRVWDCASGQC------A------GVIN--LG 191 (308)
Q Consensus 141 ~~~~~~------~~--------h~~~v~~~~~~~~~~~l~s~s-~dg~v~~wd~~~~~~------~------~~~~--~~ 191 (308)
.+..+ .+ +...+.+++|+|++++++.++ .++.|.+|++..... + .... ..
T Consensus 132 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 210 (361)
T 3scy_A 132 -ALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPG 210 (361)
T ss_dssp -CBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTT
T ss_pred -cCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCC
Confidence 11111 11 123457899999999765554 588999998875331 1 1222 22
Q ss_pred CeeE--EEEcCCCEEEEEc--CCcEEEEEcCCCcee---ee---eCCCCCEEEEEEeCC--EEEEEc-C-CCeEEEEEcC
Q 021744 192 GEVG--CMISEGPWIFIGV--TNFVKAWNTQTNTDL---SL---SGPVGQVYAMAVGND--LLFAGT-Q-DGAILAWKFN 257 (308)
Q Consensus 192 ~~v~--~~~~~~~~l~~~~--d~~i~~wd~~~~~~~---~~---~~~~~~v~~~~~~~~--~l~~g~-~-dg~i~iwd~~ 257 (308)
.... .+.+++++++++. ++.|.+||+.+++.. .+ ..+...+..++|+|+ +|+++. . ++.|.+|++.
T Consensus 211 ~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 211 SGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp CCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred CCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 2233 3468898877544 789999999877653 22 233355789999999 665544 4 5899999997
Q ss_pred CCCcccccceeccccCCCeEE-EEecCCCeEEEee----ceEEEEee
Q 021744 258 VTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV----SFIMFIGQ 299 (308)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~----s~~i~~~~ 299 (308)
......+.+..+.. ...+.. +|+|||++|+++. .+.+|.+.
T Consensus 291 ~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 291 ETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp TTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred CCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 32211234444544 445666 9999999888665 34555444
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.75 E-value=1.9e-17 Score=154.46 Aligned_cols=252 Identities=8% Similarity=-0.093 Sum_probs=162.4
Q ss_pred ceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCcccccc----c-eeEEecCCCe-eeccC---------CCcEEEE
Q 021744 28 LSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGA----A-AKRFANNTWG-RNNNF---------NNHSNNY 92 (308)
Q Consensus 28 ~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~----~-~i~~s~~g~~-~s~~~---------d~~i~vw 92 (308)
.++..+.|++|++||..++.. .....+|.. . .++|||||+. ++++. |++|++|
T Consensus 28 ~~~~~~~d~~i~~~~~~~g~~------------~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 28 EYLHQSADNNIVLYNIETGQS------------YTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp EEEEECTTSCEEEEESSSCCE------------EEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred eEEEEcCCCCEEEEEcCCCcE------------EEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEE
Confidence 455555799999999988711 011112211 2 6899999998 77765 7899999
Q ss_pred ECCCCCCcccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEe-eCcccce-----------------E
Q 021744 93 RAGNSKNSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQL-EGHQKVV-----------------S 154 (308)
Q Consensus 93 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~-~~h~~~v-----------------~ 154 (308)
|+++++.... ......+..+.|+|+|..+.-..++.|++|++.++ +..... .++...| .
T Consensus 96 d~~~g~~~~~--~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g-~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~ 172 (719)
T 1z68_A 96 DLSNGEFVRG--NELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGD-PPFQITFNGRENKIFNGIPDWVYEEEMLATKY 172 (719)
T ss_dssp ETTTTEECCS--SCCCSSBCCEEECSSTTCEEEEETTEEEEESSTTS-CCEECCCCCBTTTEEESSCCHHHHHHTTCSSC
T ss_pred ECCCCccccc--eecCcccccceECCCCCEEEEEECCeEEEEeCCCC-CcEEEecCCCcCCeEcccccceeeeecccCcc
Confidence 9988765210 11123477899999997744446899999999887 333221 2333322 4
Q ss_pred EEEEeCCCCEEEEeeCCC----------------------------------cEEEEeCCCCeEE--EEEe-------CC
Q 021744 155 GITLPSGSDKLYSGSKDE----------------------------------TVRVWDCASGQCA--GVIN-------LG 191 (308)
Q Consensus 155 ~~~~~~~~~~l~s~s~dg----------------------------------~v~~wd~~~~~~~--~~~~-------~~ 191 (308)
+++|+|||++|++++.|. .|++||+.+++.. ..+. +.
T Consensus 173 ~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~ 252 (719)
T 1z68_A 173 ALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSD 252 (719)
T ss_dssp CEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSC
T ss_pred cEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCc
Confidence 899999999999988653 7889999987653 1111 33
Q ss_pred CeeEEE--EcCCCEEEEEc-C----CcEEEEE----cCCCceee-e----eCCCCCEE-----EEEEeCC--E-EE-EEc
Q 021744 192 GEVGCM--ISEGPWIFIGV-T----NFVKAWN----TQTNTDLS-L----SGPVGQVY-----AMAVGND--L-LF-AGT 246 (308)
Q Consensus 192 ~~v~~~--~~~~~~l~~~~-d----~~i~~wd----~~~~~~~~-~----~~~~~~v~-----~~~~~~~--~-l~-~g~ 246 (308)
..+..+ +|+++++++.. . ..|.+|| +.+++... + ..|...+. .+.|+|+ . ++ +..
T Consensus 253 ~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 332 (719)
T 1z68_A 253 YYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSD 332 (719)
T ss_dssp EEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEEC
T ss_pred ceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEc
Confidence 344443 57776666533 2 2488999 87777663 3 35666666 7899998 3 33 455
Q ss_pred CCCe--EEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee-c-------eEEEEeec
Q 021744 247 QDGA--ILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV-S-------FIMFIGQN 300 (308)
Q Consensus 247 ~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-s-------~~i~~~~~ 300 (308)
.+|. |.+||+.++ + ...+..+...+.. .++ +++.++.+. . ..+|....
T Consensus 333 ~~g~~~l~~~~~~~~----~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 333 KDGYKHIHYIKDTVE----N-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp TTSCEEEEEESSCST----T-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred cCCceEEEEEECCCC----c-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 6664 556666553 2 3455555556666 666 777776443 3 56777654
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.75 E-value=1.4e-17 Score=155.28 Aligned_cols=219 Identities=7% Similarity=-0.021 Sum_probs=151.6
Q ss_pred eeEEecCCCeeeccCCCcEEEEECCCCCCcccccceeee---eeeeeeeecCCce-EEeeC---------CCeEEEEEcC
Q 021744 71 AKRFANNTWGRNNNFNNHSNNYRAGNSKNSNINNRAVIK---TDILCRNWVQGNC-MYGEK---------CKFLHSWTVG 137 (308)
Q Consensus 71 ~i~~s~~g~~~s~~~d~~i~vwd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~g~~---------d~~i~iwd~~ 137 (308)
.++|+|+|.++..+.|++|++||+.+++.... ...+.. .+..+.|+|+|.. ++++. ++.|++||+.
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTI-LSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEE-ECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEE-EccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 57999999664445699999999988764311 111222 2778999999976 55554 6899999999
Q ss_pred CCceee--eEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEeCC--C-------------------ee
Q 021744 138 DGFKLL--TQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLG--G-------------------EV 194 (308)
Q Consensus 138 ~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~~--~-------------------~v 194 (308)
++ +.+ ..+ ...+..++|+|||+.|+.+. ++.|++||+.+++........ . ..
T Consensus 99 ~g-~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~ 173 (719)
T 1z68_A 99 NG-EFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYA 173 (719)
T ss_dssp TT-EECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCC
T ss_pred CC-ccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCccc
Confidence 88 442 222 25688999999999999886 789999999988765433211 1 12
Q ss_pred EEEEcCCCEEEEEc-CC----------------------------------cEEEEEcCCCcee---e------eeCCCC
Q 021744 195 GCMISEGPWIFIGV-TN----------------------------------FVKAWNTQTNTDL---S------LSGPVG 230 (308)
Q Consensus 195 ~~~~~~~~~l~~~~-d~----------------------------------~i~~wd~~~~~~~---~------~~~~~~ 230 (308)
..++|||++|+.++ |. .|++||+.+++.. . +.+|..
T Consensus 174 ~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~ 253 (719)
T 1z68_A 174 LWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDY 253 (719)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCE
T ss_pred EEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcc
Confidence 34578999998654 31 7889999988642 2 235777
Q ss_pred CEEEEEEeCC--EEEEEcC--C--CeEEEEE----cCCCCcccccceec----cccCCCeE-----E-EEecCCCeEEE-
Q 021744 231 QVYAMAVGND--LLFAGTQ--D--GAILAWK----FNVTTNCFEPAASL----KVHTDSNR-----A-HFSRDVTSLLG- 289 (308)
Q Consensus 231 ~v~~~~~~~~--~l~~g~~--d--g~i~iwd----~~~~~~~~~~~~~~----~~~~~~v~-----~-~~s~d~~~l~~- 289 (308)
.+.+++|+|| ++++... + ..|.+|| +.++ +....+ ..|...+. . .|+|||+.++.
T Consensus 254 ~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 329 (719)
T 1z68_A 254 YFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTW----DCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKI 329 (719)
T ss_dssp EEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSE----ECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEE
T ss_pred eEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCC----ceEEEEecccccCCceEccccCCccEECCCCCeEEEE
Confidence 8999999999 4444332 2 2488889 6665 333444 35666665 6 99999996653
Q ss_pred ee----ceEEEEee
Q 021744 290 SV----SFIMFIGQ 299 (308)
Q Consensus 290 s~----s~~i~~~~ 299 (308)
+. ...||++.
T Consensus 330 ~~~~~g~~~l~~~~ 343 (719)
T 1z68_A 330 FSDKDGYKHIHYIK 343 (719)
T ss_dssp EECTTSCEEEEEES
T ss_pred EEccCCceEEEEEE
Confidence 22 34666654
No 159
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.74 E-value=2.1e-15 Score=128.17 Aligned_cols=209 Identities=14% Similarity=0.121 Sum_probs=136.0
Q ss_pred ccCCCcEEEEECCC--CCCcccccceeeeeeeeeeeecCCceEEeeC---CCeEEEEEcCCCc-eeeeEeeCcccceEEE
Q 021744 83 NNFNNHSNNYRAGN--SKNSNINNRAVIKTDILCRNWVQGNCMYGEK---CKFLHSWTVGDGF-KLLTQLEGHQKVVSGI 156 (308)
Q Consensus 83 ~~~d~~i~vwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---d~~i~iwd~~~~~-~~~~~~~~h~~~v~~~ 156 (308)
++.++.|.+|+++. ++........+...+..+.++|++.+++++. ++.|++|++.++. +.+..+..+...+..+
T Consensus 12 ~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~ 91 (347)
T 3hfq_A 12 KKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYV 91 (347)
T ss_dssp SSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEE
T ss_pred CCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEE
Confidence 34567788887753 4332212233334477789999997644433 6899999997662 2444555577888999
Q ss_pred EEeCCCCEEEEee-CCCcEEEEeCCC-C--eEEEEEeCCC----------eeE--EEEcCCCEEEEEc-CCcEEEEEcC-
Q 021744 157 TLPSGSDKLYSGS-KDETVRVWDCAS-G--QCAGVINLGG----------EVG--CMISEGPWIFIGV-TNFVKAWNTQ- 218 (308)
Q Consensus 157 ~~~~~~~~l~s~s-~dg~v~~wd~~~-~--~~~~~~~~~~----------~v~--~~~~~~~~l~~~~-d~~i~~wd~~- 218 (308)
+|+|++++|++++ .++.|.+|++.. + +.+..+.... .+. .+.++++++++.. ++.|.+||+.
T Consensus 92 a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~ 171 (347)
T 3hfq_A 92 AVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSD 171 (347)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECT
T ss_pred EECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECC
Confidence 9999999888887 689999999963 3 3333343221 133 3468888555555 7799999998
Q ss_pred CCcee---eeeCC-CCCEEEEEEeCC--E-EEEEcCCCeEEEEEcCCCCcccccceeccccC------CCeEE-EEecCC
Q 021744 219 TNTDL---SLSGP-VGQVYAMAVGND--L-LFAGTQDGAILAWKFNVTTNCFEPAASLKVHT------DSNRA-HFSRDV 284 (308)
Q Consensus 219 ~~~~~---~~~~~-~~~v~~~~~~~~--~-l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~------~~v~~-~~s~d~ 284 (308)
+++.. .+..+ ...+..++|+|+ + ++++..++.|.+|++.........+..+.... ..+.. +|+|||
T Consensus 172 ~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG 251 (347)
T 3hfq_A 172 AGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDG 251 (347)
T ss_dssp TSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTS
T ss_pred CCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCC
Confidence 55443 22222 336788999999 4 44567789999999885222122233333222 34666 999999
Q ss_pred CeEEEee
Q 021744 285 TSLLGSV 291 (308)
Q Consensus 285 ~~l~~s~ 291 (308)
++|+++.
T Consensus 252 ~~l~v~~ 258 (347)
T 3hfq_A 252 HFLYVSN 258 (347)
T ss_dssp CEEEEEE
T ss_pred CEEEEEe
Confidence 9886544
No 160
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.72 E-value=1.3e-15 Score=142.55 Aligned_cols=258 Identities=8% Similarity=-0.087 Sum_probs=159.0
Q ss_pred CceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCC---------CcEEEEEC
Q 021744 27 GLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFN---------NHSNNYRA 94 (308)
Q Consensus 27 ~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d---------~~i~vwd~ 94 (308)
.+++++ |++|++||..++. +..+.... ....+... .++|||||+. +.++.+ +.+.+||+
T Consensus 29 ~~~~~~--~~~i~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~ 99 (740)
T 4a5s_A 29 EYLYKQ--ENNILVFNAEYGN---SSVFLENS----TFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDL 99 (740)
T ss_dssp EEEEEE--TTEEEEEETTTCC---EEEEECTT----TTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred cEEEEc--CCcEEEEECCCCc---eEEEEech----hhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEEC
Confidence 566665 9999999998872 11111100 01111111 3789999999 777766 45679999
Q ss_pred CCCCCcccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeee-EeeCcccce-----------------EEE
Q 021744 95 GNSKNSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLT-QLEGHQKVV-----------------SGI 156 (308)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~-~~~~h~~~v-----------------~~~ 156 (308)
++++.. .+..+...+....|+|+|..++-..++.|++|++.++. ..+ +..++...+ ..+
T Consensus 100 ~~~~~~--~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~-~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~ 176 (740)
T 4a5s_A 100 NKRQLI--TEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLP-SYRITWTGKEDIIYNGITDWVYEEEVFSAYSAL 176 (740)
T ss_dssp TTTEEC--CSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSC-CEECCSCCBTTTEEESBCCHHHHHHTSSSSBCE
T ss_pred CCCcEE--EcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCc-eEEEcCCCCccceecCcccccccchhcCCCcce
Confidence 988654 33444456888999999987444468999999998873 322 223333322 358
Q ss_pred EEeCCCCEEEEeeCCC------------------------------------cEEEEeCCC---Ce--EEEEEe------
Q 021744 157 TLPSGSDKLYSGSKDE------------------------------------TVRVWDCAS---GQ--CAGVIN------ 189 (308)
Q Consensus 157 ~~~~~~~~l~s~s~dg------------------------------------~v~~wd~~~---~~--~~~~~~------ 189 (308)
.|+|||++|+..+.|. +|++||+.+ ++ ....+.
T Consensus 177 ~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~ 256 (740)
T 4a5s_A 177 WWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASML 256 (740)
T ss_dssp EECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHH
T ss_pred EECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCC
Confidence 9999999998875332 478899988 73 222332
Q ss_pred -CCCeeEE--EEcCCCEEEEEc-----CCcEEEEEcCCCc----ee---ee--eCCCCCEE-----EEEEeCC--EEE-E
Q 021744 190 -LGGEVGC--MISEGPWIFIGV-----TNFVKAWNTQTNT----DL---SL--SGPVGQVY-----AMAVGND--LLF-A 244 (308)
Q Consensus 190 -~~~~v~~--~~~~~~~l~~~~-----d~~i~~wd~~~~~----~~---~~--~~~~~~v~-----~~~~~~~--~l~-~ 244 (308)
+...+.. ++|++++++... +..|.+||+.+++ +. .+ ..+...+. ...|+|| .++ .
T Consensus 257 ~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~ 336 (740)
T 4a5s_A 257 IGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKI 336 (740)
T ss_dssp TSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEE
T ss_pred CCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEE
Confidence 2223333 368888666432 2379999999987 22 22 44555544 7889999 444 4
Q ss_pred Ec-CCC--eEEEEEcCCCCcccccceeccccCCCeEEEEecCCCeEEEee-c-------eEEEEeecC
Q 021744 245 GT-QDG--AILAWKFNVTTNCFEPAASLKVHTDSNRAHFSRDVTSLLGSV-S-------FIMFIGQNN 301 (308)
Q Consensus 245 g~-~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~s~d~~~l~~s~-s-------~~i~~~~~~ 301 (308)
.+ .+| .|++||+..+ ....+......+...+.+|++.++..+ . ..||....+
T Consensus 337 ~s~~~G~~~l~~~~~~~~-----~~~~lT~g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~ 399 (740)
T 4a5s_A 337 ISNEEGYRHICYFQIDKK-----DCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLI 399 (740)
T ss_dssp EECTTSCEEEEEEETTCS-----SCEESCCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETT
T ss_pred EEcCCCceEEEEEECCCC-----ceEecccCCEEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECC
Confidence 44 444 5788888764 233444444455543445576665333 2 477776543
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.72 E-value=1.9e-15 Score=130.27 Aligned_cols=257 Identities=7% Similarity=-0.004 Sum_probs=158.2
Q ss_pred CCceEEecC-CC--eEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEecCCCe-eeccCCCcEEEEECCCCCC
Q 021744 26 GGLSTADTR-QK--VCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFANNTWG-RNNNFNNHSNNYRAGNSKN 99 (308)
Q Consensus 26 ~~~~~s~s~-d~--~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~ 99 (308)
+..|+..+. ++ .|.+||..+++ ... ...++... ..+|+|||+. +.++.++.|++||+.+++.
T Consensus 47 g~~l~~~~~~~g~~~l~~~d~~~g~-----------~~~-lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~ 114 (388)
T 3pe7_A 47 GSKLLFGGAFDGPWNYYLLDLNTQV-----------ATQ-LTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEE 114 (388)
T ss_dssp SCEEEEEECTTSSCEEEEEETTTCE-----------EEE-CCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred CCEEEEEEcCCCCceEEEEeCCCCc-----------eEE-eeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcc
Confidence 566777666 66 47778877661 111 11122222 4689999999 8888899999999988754
Q ss_pred cccccceeeeee--eeeeeecCCceEE-----------------------eeCCCeEEEEEcCCCceeeeEeeCcccceE
Q 021744 100 SNINNRAVIKTD--ILCRNWVQGNCMY-----------------------GEKCKFLHSWTVGDGFKLLTQLEGHQKVVS 154 (308)
Q Consensus 100 ~~~~~~~~~~~~--~~~~~~~~~~~~~-----------------------g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~ 154 (308)
.... ..+...+ ....+++++..+. ...+..|++||+.++ + ...+..+...+.
T Consensus 115 ~~~~-~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g-~-~~~l~~~~~~~~ 191 (388)
T 3pe7_A 115 NVVY-QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG-E-STVILQENQWLG 191 (388)
T ss_dssp EEEE-ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC-C-EEEEEEESSCEE
T ss_pred eeee-echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCC-c-eEEeecCCcccc
Confidence 3211 1111112 1223467776543 234578999999988 3 344555677899
Q ss_pred EEEEeC-CCCEEEEeeCC------CcEEEEeCCCCeEEEEEeCC--CeeE--EEEcCCCEEE-EEc-CC----cEEEEEc
Q 021744 155 GITLPS-GSDKLYSGSKD------ETVRVWDCASGQCAGVINLG--GEVG--CMISEGPWIF-IGV-TN----FVKAWNT 217 (308)
Q Consensus 155 ~~~~~~-~~~~l~s~s~d------g~v~~wd~~~~~~~~~~~~~--~~v~--~~~~~~~~l~-~~~-d~----~i~~wd~ 217 (308)
.++|+| +++.|+.++.+ ..|.++|+..++........ ..+. .++|+++.|+ ++. ++ .|++||+
T Consensus 192 ~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 271 (388)
T 3pe7_A 192 HPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADP 271 (388)
T ss_dssp EEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECT
T ss_pred ccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEec
Confidence 999999 99988877653 37888888765543333332 1233 3468888765 333 22 3999999
Q ss_pred CCCceeeeeCCCCC------EEEEEEeCC--EEEEE---------cCCCeEEEEEcCCCCcccccceeccccCC------
Q 021744 218 QTNTDLSLSGPVGQ------VYAMAVGND--LLFAG---------TQDGAILAWKFNVTTNCFEPAASLKVHTD------ 274 (308)
Q Consensus 218 ~~~~~~~~~~~~~~------v~~~~~~~~--~l~~g---------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~------ 274 (308)
.+++...+...... ...+.|+|+ .|+.. ..+..|++||+.++. +..+..+..
T Consensus 272 ~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~-----~~~l~~~~~~~~~~~ 346 (388)
T 3pe7_A 272 ETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT-----QHRVARHDTSWKVFE 346 (388)
T ss_dssp TTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTE-----EEEEEECCCCCCCBT
T ss_pred CCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc-----eEEeccccCcccccc
Confidence 99876533221110 111368888 44432 556789999999852 234444444
Q ss_pred -----CeEE-EEecCCCeEEEee----ceEEEEeecCc
Q 021744 275 -----SNRA-HFSRDVTSLLGSV----SFIMFIGQNNK 302 (308)
Q Consensus 275 -----~v~~-~~s~d~~~l~~s~----s~~i~~~~~~~ 302 (308)
.+.. +|+|||+.|+.++ ...||...-..
T Consensus 347 ~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~ 384 (388)
T 3pe7_A 347 GDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLPE 384 (388)
T ss_dssp TBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCG
T ss_pred cccccCCCCccCCCCCCEEEEEecCCCceeEEEEECCh
Confidence 4566 9999999888443 45677665443
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.72 E-value=3.9e-16 Score=146.03 Aligned_cols=224 Identities=10% Similarity=-0.035 Sum_probs=151.7
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeee---e--eeeeeecCCce-EEeeCC---------CeEEEE
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKT---D--ILCRNWVQGNC-MYGEKC---------KFLHSW 134 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~-~~g~~d---------~~i~iw 134 (308)
.++|+|+|.+ +++ |++|++||+.+++.... ...+... + ....++|+|.. ++++.+ +.+.+|
T Consensus 21 ~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~ 97 (740)
T 4a5s_A 21 SLRWISDHEYLYKQ--ENNILVFNAEYGNSSVF-LENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY 97 (740)
T ss_dssp CEEECSSSEEEEEE--TTEEEEEETTTCCEEEE-ECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred ccEECCCCcEEEEc--CCcEEEEECCCCceEEE-EechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEE
Confidence 5899999988 665 99999999988864321 1112111 2 23678999976 555554 667899
Q ss_pred EcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEeCC--Cee------------------
Q 021744 135 TVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLG--GEV------------------ 194 (308)
Q Consensus 135 d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~~--~~v------------------ 194 (308)
|+.++ +. ..+..|...+...+|+|||+.|+.+. |+.|++||+.+++..+..... ..+
T Consensus 98 d~~~~-~~-~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~ 174 (740)
T 4a5s_A 98 DLNKR-QL-ITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYS 174 (740)
T ss_dssp ETTTT-EE-CCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSB
T ss_pred ECCCC-cE-EEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCc
Confidence 99998 43 35677888999999999999998884 689999999988755422211 111
Q ss_pred -EEEEcCCCEEEEEc-C-C-----------------------------------cEEEEEcCC---C---ceeeee----
Q 021744 195 -GCMISEGPWIFIGV-T-N-----------------------------------FVKAWNTQT---N---TDLSLS---- 226 (308)
Q Consensus 195 -~~~~~~~~~l~~~~-d-~-----------------------------------~i~~wd~~~---~---~~~~~~---- 226 (308)
..++|||+.|+... | . +|++||+.+ + +...+.
T Consensus 175 ~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~ 254 (740)
T 4a5s_A 175 ALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPAS 254 (740)
T ss_dssp CEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHH
T ss_pred ceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCcc
Confidence 34578999888542 1 1 578899998 7 444444
Q ss_pred --CCCCCEEEEEEeCC--EEEEEc----CCCeEEEEEcCCCCcc--cccceec--cccCCCeE-----E-EEecCCCeEE
Q 021744 227 --GPVGQVYAMAVGND--LLFAGT----QDGAILAWKFNVTTNC--FEPAASL--KVHTDSNR-----A-HFSRDVTSLL 288 (308)
Q Consensus 227 --~~~~~v~~~~~~~~--~l~~g~----~dg~i~iwd~~~~~~~--~~~~~~~--~~~~~~v~-----~-~~s~d~~~l~ 288 (308)
++...+..++|+|| .++... .+..|++||+.+++.. ...+..+ ..|...+. . +|+|||+.++
T Consensus 255 ~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~ 334 (740)
T 4a5s_A 255 MLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFY 334 (740)
T ss_dssp HHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEE
T ss_pred CCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEE
Confidence 37778999999999 344332 2347999999987310 0112222 34555554 6 9999999776
Q ss_pred -Eee----ceEEEEeec
Q 021744 289 -GSV----SFIMFIGQN 300 (308)
Q Consensus 289 -~s~----s~~i~~~~~ 300 (308)
... ...||++..
T Consensus 335 ~~~s~~~G~~~l~~~~~ 351 (740)
T 4a5s_A 335 KIISNEEGYRHICYFQI 351 (740)
T ss_dssp EEEECTTSCEEEEEEET
T ss_pred EEEEcCCCceEEEEEEC
Confidence 332 366777653
No 163
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.72 E-value=3.3e-14 Score=121.47 Aligned_cols=222 Identities=9% Similarity=0.020 Sum_probs=138.2
Q ss_pred CCceEEecCC----CeEEEeecCCCCCCCCCcccccCCCCCCccccc-cc-eeEEecCCCe--eeccCCCcEEEEECCCC
Q 021744 26 GGLSTADTRQ----KVCNYWRAGKCNRFPCPYLHRELPLPPAATANG-AA-AKRFANNTWG--RNNNFNNHSNNYRAGNS 97 (308)
Q Consensus 26 ~~~~~s~s~d----~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~-~~-~i~~s~~g~~--~s~~~d~~i~vwd~~~~ 97 (308)
+.+|++++.+ +.|++|+...... ....+. . ...+. .. .+++ +++. ++...+++|.+|++...
T Consensus 61 g~~l~~~~~~~~~~~~v~~~~~~~~~g-~~~~~~------~-~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~ 130 (361)
T 3scy_A 61 GKFVYSVNEFSKDQAAVSAFAFDKEKG-TLHLLN------T-QKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQD 130 (361)
T ss_dssp SSEEEEEECCSSTTCEEEEEEEETTTT-EEEEEE------E-EECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTT
T ss_pred CCEEEEEEccCCCCCcEEEEEEeCCCC-cEEEee------E-eccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCC
Confidence 5667777765 7999998764200 000000 0 00111 11 4555 7877 44446899999999654
Q ss_pred CCcccccc-------------eeeeeeeeeeeecCCce--EEeeCCCeEEEEEcCCCce------e------eeEeeCcc
Q 021744 98 KNSNINNR-------------AVIKTDILCRNWVQGNC--MYGEKCKFLHSWTVGDGFK------L------LTQLEGHQ 150 (308)
Q Consensus 98 ~~~~~~~~-------------~~~~~~~~~~~~~~~~~--~~g~~d~~i~iwd~~~~~~------~------~~~~~~h~ 150 (308)
..+..... .+...+..+.++|++.. ++...++.|++|++..... . ......+.
T Consensus 131 g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 210 (361)
T 3scy_A 131 GALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPG 210 (361)
T ss_dssp SCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTT
T ss_pred CcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCC
Confidence 33221111 01112466899999974 4444689999999875521 1 11122344
Q ss_pred cceEEEEEeCCCCEEEEee-CCCcEEEEeCCCCeEE--EEEeC-C---Cee--EEEEcCCCEEEEEc-C--CcEEEEEcC
Q 021744 151 KVVSGITLPSGSDKLYSGS-KDETVRVWDCASGQCA--GVINL-G---GEV--GCMISEGPWIFIGV-T--NFVKAWNTQ 218 (308)
Q Consensus 151 ~~v~~~~~~~~~~~l~s~s-~dg~v~~wd~~~~~~~--~~~~~-~---~~v--~~~~~~~~~l~~~~-d--~~i~~wd~~ 218 (308)
..+..++|+|++++++.++ .++.|.+|++.+++.. ..+.. . ... .++.+++++|+++. + +.|.+|++.
T Consensus 211 ~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 211 SGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp CCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred CCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 5678999999999887766 6899999999977543 33331 1 112 23468999887654 4 789999996
Q ss_pred --CCcee---eeeCCCCCEEEEEEeCC--EEEEEc-CCCeEEEEEcCC
Q 021744 219 --TNTDL---SLSGPVGQVYAMAVGND--LLFAGT-QDGAILAWKFNV 258 (308)
Q Consensus 219 --~~~~~---~~~~~~~~v~~~~~~~~--~l~~g~-~dg~i~iwd~~~ 258 (308)
+++.. .+.. ...+..++|+|+ +|++++ .++.|.+|++..
T Consensus 291 ~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 291 ETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp TTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECT
T ss_pred CCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEEC
Confidence 44432 3333 456789999999 666665 679999977654
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.70 E-value=7.3e-15 Score=125.94 Aligned_cols=215 Identities=12% Similarity=0.139 Sum_probs=141.3
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECC-CCCCcccccceee--eeeeeeeeecCCc--eE-Eee-------------CCCe
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAG-NSKNSNINNRAVI--KTDILCRNWVQGN--CM-YGE-------------KCKF 130 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~-~g~-------------~d~~ 130 (308)
.++++|+|++ ++++.+ +|.+|+++ +++... ...+. ..+..+.++|++. ++ ++. .++.
T Consensus 44 ~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~--~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~ 120 (365)
T 1jof_A 44 WMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVH--EASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGY 120 (365)
T ss_dssp EEEECTTSSEEEEEEBT-EEEEEEEEETTEEEE--EEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCE
T ss_pred EEEECCCCCEEEEEccc-eEEEEEECCCCCEEE--eeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCce
Confidence 6899999998 777777 99999996 554321 11111 2255678899997 33 332 6899
Q ss_pred EEEEEcCC-CceeeeEee----CcccceEEEEEeCCCCEEEEeeC-CCcEEEEeCC-CCeEE--EEEeC---CCeeE--E
Q 021744 131 LHSWTVGD-GFKLLTQLE----GHQKVVSGITLPSGSDKLYSGSK-DETVRVWDCA-SGQCA--GVINL---GGEVG--C 196 (308)
Q Consensus 131 i~iwd~~~-~~~~~~~~~----~h~~~v~~~~~~~~~~~l~s~s~-dg~v~~wd~~-~~~~~--~~~~~---~~~v~--~ 196 (308)
+.+|++.. + +....+. .+...+.+++|+|++++++++.. ++.|++||+. +++.. ..+.. ..... .
T Consensus 121 v~v~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~ 199 (365)
T 1jof_A 121 GNVFSVSETG-KLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVA 199 (365)
T ss_dssp EEEEEECTTC-CEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEE
T ss_pred EEEEccCCCC-cCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeE
Confidence 99999974 4 3433333 24567899999999998877654 6799999998 67643 33431 33343 3
Q ss_pred EEcCCCEEEEEc--CCcEEEEEcC--CCcee----eee-------CCCC------CEEEEE-EeCC--EEEEEcC-CC--
Q 021744 197 MISEGPWIFIGV--TNFVKAWNTQ--TNTDL----SLS-------GPVG------QVYAMA-VGND--LLFAGTQ-DG-- 249 (308)
Q Consensus 197 ~~~~~~~l~~~~--d~~i~~wd~~--~~~~~----~~~-------~~~~------~v~~~~-~~~~--~l~~g~~-dg-- 249 (308)
+.+++++++++. ++.|.+|++. +++.. .+. ++.. .+..++ |+|| +|+++.. ++
T Consensus 200 ~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~ 279 (365)
T 1jof_A 200 MHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFE 279 (365)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTT
T ss_pred ECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCC
Confidence 468899887654 6799999865 45431 121 1122 588999 9999 6655543 23
Q ss_pred ---eEEEEEcC-CCCcccccce-eccccCCCeEE-EEec---CCCeEEEee
Q 021744 250 ---AILAWKFN-VTTNCFEPAA-SLKVHTDSNRA-HFSR---DVTSLLGSV 291 (308)
Q Consensus 250 ---~i~iwd~~-~~~~~~~~~~-~~~~~~~~v~~-~~s~---d~~~l~~s~ 291 (308)
.|.+|++. +++ ...+. ....+...... +|+| ||++|+++.
T Consensus 280 ~~~~i~v~~~~~~g~--~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~ 328 (365)
T 1jof_A 280 LQGYIAGFKLRDCGS--IEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITD 328 (365)
T ss_dssp SCCEEEEEEECTTSC--EEEEEEEEECSSCCTTCCCEEECTTCTTEEEEEC
T ss_pred CCCeEEEEEECCCCC--EEEeeeeeecCCCCcccceecCCCcCCCEEEEEE
Confidence 89999996 331 11111 13334444555 8999 899988665
No 165
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.67 E-value=1.2e-13 Score=116.63 Aligned_cols=223 Identities=10% Similarity=0.028 Sum_probs=153.9
Q ss_pred eeEEecCCCe-eeccCC------------------------CcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EE
Q 021744 71 AKRFANNTWG-RNNNFN------------------------NHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MY 124 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d------------------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 124 (308)
.++++|+|+. ++...+ ++|.+||.++++........+-..+..+++.+++.+ ++
T Consensus 28 ~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~ 107 (329)
T 3fvz_A 28 GVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVT 107 (329)
T ss_dssp EEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEE
T ss_pred EEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEE
Confidence 7999999998 777766 479999998776543222222234677888899877 66
Q ss_pred eeCCCeEEEEEcCCCceeeeEe---------eCcccceEEEEEeC-CCCEEEEee-CCCcEEEEeCCCCeEEEEEeCCC-
Q 021744 125 GEKCKFLHSWTVGDGFKLLTQL---------EGHQKVVSGITLPS-GSDKLYSGS-KDETVRVWDCASGQCAGVINLGG- 192 (308)
Q Consensus 125 g~~d~~i~iwd~~~~~~~~~~~---------~~h~~~v~~~~~~~-~~~~l~s~s-~dg~v~~wd~~~~~~~~~~~~~~- 192 (308)
...++.|++|+.......+..+ .++......++++| ++.++++.+ .++.|++|| .+++.+..+....
T Consensus 108 d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~ 186 (329)
T 3fvz_A 108 DVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESS 186 (329)
T ss_dssp ETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECC
T ss_pred ECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCC
Confidence 7778999999986542245555 24455789999999 788888876 689999999 5677777764111
Q ss_pred -------e---eEE--EEcC-CCEEEEEc-CCcEEEEEcCCCcee-ee--eCCCCCEEEEEEeCC-EEEEEc-------C
Q 021744 193 -------E---VGC--MISE-GPWIFIGV-TNFVKAWNTQTNTDL-SL--SGPVGQVYAMAVGND-LLFAGT-------Q 247 (308)
Q Consensus 193 -------~---v~~--~~~~-~~~l~~~~-d~~i~~wd~~~~~~~-~~--~~~~~~v~~~~~~~~-~l~~g~-------~ 247 (308)
. ... +.++ +.++++.. ++.|++||..+++.+ .+ ..+...+.+++++|. .+.+.+ .
T Consensus 187 ~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~ 266 (329)
T 3fvz_A 187 GSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQE 266 (329)
T ss_dssp SSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSC
T ss_pred CCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCC
Confidence 1 223 3466 55555555 789999999988776 33 345668899999997 333333 3
Q ss_pred CCeEEEEEcCCCCcccccceec---cccCCCeEE-EEecCCCeEEEee-ceEEEEe
Q 021744 248 DGAILAWKFNVTTNCFEPAASL---KVHTDSNRA-HFSRDVTSLLGSV-SFIMFIG 298 (308)
Q Consensus 248 dg~i~iwd~~~~~~~~~~~~~~---~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~ 298 (308)
+..|++||+.++ +.+..+ ..+...... +++|+|.++++.. ...|+.+
T Consensus 267 ~~~v~~~~~~~g----~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~ 318 (329)
T 3fvz_A 267 PVQGFVMNFSSG----EIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKF 318 (329)
T ss_dssp CCCEEEEETTTC----CEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEE
T ss_pred CcEEEEEEcCCC----eEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEE
Confidence 458999999887 555555 355666777 9999995555433 4344443
No 166
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.65 E-value=5.4e-14 Score=120.36 Aligned_cols=232 Identities=10% Similarity=0.100 Sum_probs=142.7
Q ss_pred CCCeEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCe-eecc----------CCCcEEEEECCCCCCccc
Q 021744 34 RQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWG-RNNN----------FNNHSNNYRAGNSKNSNI 102 (308)
Q Consensus 34 ~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~-~s~~----------~d~~i~vwd~~~~~~~~~ 102 (308)
.|++|++||..++. .+ ...+. +... .++|+|+|++ +++. .+++|.+||..+.+....
T Consensus 29 ~d~~v~v~D~~t~~-----~~-~~i~~-----g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~ 96 (361)
T 2oiz_A 29 TESRVHVYDYTNGK-----FL-GMVPT-----AFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKE 96 (361)
T ss_dssp GGCEEEEEETTTCC-----EE-EEEEC-----CEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEE
T ss_pred ccCeEEEEECCCCe-----EE-EEecC-----CCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEE
Confidence 47899999987761 11 11111 1112 5899999998 5543 367899999987665432
Q ss_pred ccce-----eeeeeeeeeeecCCceE-Eee-C-CCeEEEEEcCCCceeeeE-eeCcccceEEEEEeCCC-CEEEEeeCC-
Q 021744 103 NNRA-----VIKTDILCRNWVQGNCM-YGE-K-CKFLHSWTVGDGFKLLTQ-LEGHQKVVSGITLPSGS-DKLYSGSKD- 171 (308)
Q Consensus 103 ~~~~-----~~~~~~~~~~~~~~~~~-~g~-~-d~~i~iwd~~~~~~~~~~-~~~h~~~v~~~~~~~~~-~~l~s~s~d- 171 (308)
.... +......+.++|+|..+ ++. . ++.|.+||+.++ +.+.. +.. .. ...+.+.|++ ..+++.+.|
T Consensus 97 i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~-~~~~~~i~~-~~-~~~v~~~p~~~~~~~~~~~dg 173 (361)
T 2oiz_A 97 ISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKG-DYVEDVTAA-AG-CWSVIPQPNRPRSFMTICGDG 173 (361)
T ss_dssp EEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTT-EEEEEEGGG-TT-EEEEEECTTSSSEEEEEETTS
T ss_pred EEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCC-cEEEEEecC-CC-cceeEEcCCCCeeEEEECCCC
Confidence 2111 12336678899999773 333 2 689999999988 66666 431 11 1112233322 233333334
Q ss_pred -----------------------------------------------CcEEEEeCCCCe--EEEEEeCC-----------
Q 021744 172 -----------------------------------------------ETVRVWDCASGQ--CAGVINLG----------- 191 (308)
Q Consensus 172 -----------------------------------------------g~v~~wd~~~~~--~~~~~~~~----------- 191 (308)
+.|.++|+...+ ....+...
T Consensus 174 ~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p 253 (361)
T 2oiz_A 174 GLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVP 253 (361)
T ss_dssp SEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEE
T ss_pred cEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcccccccccc
Confidence 444444443321 11111100
Q ss_pred --CeeEEEEcCCCEEEEEc------------CCcEEEEEcCCCcee-eeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEE
Q 021744 192 --GEVGCMISEGPWIFIGV------------TNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAW 254 (308)
Q Consensus 192 --~~v~~~~~~~~~l~~~~------------d~~i~~wd~~~~~~~-~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iw 254 (308)
.....+.++++.+++.. .+.|.+||+.+++.+ ++..+. +.+++|+|+ +|++++. +.|.+|
T Consensus 254 ~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~ 330 (361)
T 2oiz_A 254 GGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVY 330 (361)
T ss_dssp CCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEE
T ss_pred CCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEE
Confidence 01134467777766532 247999999999988 666665 899999999 7777776 999999
Q ss_pred EcCCCCcccccceeccccCCCeEE-EEecCCC
Q 021744 255 KFNVTTNCFEPAASLKVHTDSNRA-HFSRDVT 285 (308)
Q Consensus 255 d~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~ 285 (308)
|..++.. +.+.++......... +++|+|+
T Consensus 331 D~~t~~l--~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 331 DISQPEP--KLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp ECSSSSC--EEEEEETTSCSSEEEEEECCCSC
T ss_pred ECCCCcc--eeeEEeccCCCCcEEEEecCCCC
Confidence 9998632 556666555666666 9999985
No 167
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.64 E-value=2.1e-13 Score=112.61 Aligned_cols=223 Identities=11% Similarity=0.093 Sum_probs=146.1
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc--eeEEe-cCCCe-eeccC-CCcEEEEECCCCCCc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA--AKRFA-NNTWG-RNNNF-NNHSNNYRAGNSKNS 100 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~--~i~~s-~~g~~-~s~~~-d~~i~vwd~~~~~~~ 100 (308)
+.++++.+.++.|++|+.... .+.. .+......++... .+++. +++.. ++... ++.|++||. +++..
T Consensus 41 g~l~v~~~~~~~i~~~d~~g~------~~~~-~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~-~g~~~ 112 (286)
T 1q7f_A 41 NDIIVADTNNHRIQIFDKEGR------FKFQ-FGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ-YGQFV 112 (286)
T ss_dssp CCEEEEEGGGTEEEEECTTSC------EEEE-ECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT-TSCEE
T ss_pred CCEEEEECCCCEEEEECCCCc------EEEE-ecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECC-CCcEE
Confidence 567888888999999997632 1110 1111111122222 78884 67777 65543 889999994 44433
Q ss_pred ccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEee--CcccceEEEEEeCCCCEEEEeeCCCcEEEE
Q 021744 101 NINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLE--GHQKVVSGITLPSGSDKLYSGSKDETVRVW 177 (308)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~dg~v~~w 177 (308)
..........+..+.+.+++.. ++...++.|++||... +.+..+. ++...+..++++++++++++...++.|++|
T Consensus 113 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g--~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~ 190 (286)
T 1q7f_A 113 RKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG--NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVF 190 (286)
T ss_dssp EEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS--CEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEE
T ss_pred EEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC--CEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEE
Confidence 2111112234677888888877 5556788999999653 3444443 345678999999999888888889999999
Q ss_pred eCCCCeEEEEEeCC---CeeEEE--EcCCCEEEEEc-CC-cEEEEEcCCCceeeeeCCC--CCEEEEEEeCC-EEEEEcC
Q 021744 178 DCASGQCAGVINLG---GEVGCM--ISEGPWIFIGV-TN-FVKAWNTQTNTDLSLSGPV--GQVYAMAVGND-LLFAGTQ 247 (308)
Q Consensus 178 d~~~~~~~~~~~~~---~~v~~~--~~~~~~l~~~~-d~-~i~~wd~~~~~~~~~~~~~--~~v~~~~~~~~-~l~~g~~ 247 (308)
|.. ++.+..+... .....+ .++++++++.. ++ .|.+||........+..+. ..+.+++++|+ .++.++.
T Consensus 191 ~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~ 269 (286)
T 1q7f_A 191 NYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLASK 269 (286)
T ss_dssp ETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEET
T ss_pred cCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEECCCCcEEEECC
Confidence 974 5666666532 233333 46788877776 55 9999996544333444332 34789999999 4444467
Q ss_pred CCeEEEEEcCCC
Q 021744 248 DGAILAWKFNVT 259 (308)
Q Consensus 248 dg~i~iwd~~~~ 259 (308)
++.|++|++...
T Consensus 270 ~~~v~v~~~~~~ 281 (286)
T 1q7f_A 270 DYRLYIYRYVQL 281 (286)
T ss_dssp TTEEEEEECSCC
T ss_pred CCeEEEEEcccc
Confidence 999999998764
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.64 E-value=8.4e-14 Score=117.64 Aligned_cols=187 Identities=7% Similarity=0.031 Sum_probs=133.5
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCC-Cccccc--------ceeeeeeeeeeeec-CCce-EEee-CCCeEEEEEcC
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSK-NSNINN--------RAVIKTDILCRNWV-QGNC-MYGE-KCKFLHSWTVG 137 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~-~~~~~~--------~~~~~~~~~~~~~~-~~~~-~~g~-~d~~i~iwd~~ 137 (308)
.++++|+|+. ++...++.|++||.+... .+.... ..+...+..+++.+ ++.+ ++.+ .++.|++|+.
T Consensus 95 gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~- 173 (329)
T 3fvz_A 95 GLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP- 173 (329)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-
T ss_pred EEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-
Confidence 7999999999 998899999999985442 111110 11222467788998 6776 5554 5899999994
Q ss_pred CCceeeeEeeC----------cccceEEEEEeCC-CCEEEEeeCCCcEEEEeCCCCeEEEEEe---CCCeeEEE-EcCCC
Q 021744 138 DGFKLLTQLEG----------HQKVVSGITLPSG-SDKLYSGSKDETVRVWDCASGQCAGVIN---LGGEVGCM-ISEGP 202 (308)
Q Consensus 138 ~~~~~~~~~~~----------h~~~v~~~~~~~~-~~~l~s~s~dg~v~~wd~~~~~~~~~~~---~~~~v~~~-~~~~~ 202 (308)
++ +.+..+.. +-.....++++|+ +.++++...++.|++||..+++.+..+. ....+..+ +.++.
T Consensus 174 ~g-~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~ 252 (329)
T 3fvz_A 174 SG-KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGF 252 (329)
T ss_dssp TS-CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTE
T ss_pred CC-CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCE
Confidence 44 44555532 2344899999998 6777888889999999999899988885 22333333 22232
Q ss_pred EEEE-------Ec-CCcEEEEEcCCCceee-e---eCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCC
Q 021744 203 WIFI-------GV-TNFVKAWNTQTNTDLS-L---SGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 203 ~l~~-------~~-d~~i~~wd~~~~~~~~-~---~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~ 259 (308)
.+.+ .. +..|++||..+++.+. + ..+...+..++++|+ ++++...++.|++|++...
T Consensus 253 ~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 253 LFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred EEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 2222 22 4589999999998873 3 356678999999999 7778888999999998753
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.64 E-value=4e-13 Score=110.92 Aligned_cols=220 Identities=10% Similarity=0.080 Sum_probs=148.5
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCCCccccc-----ceeeeeeeeeeee-cCCceEEee-C-CCeEEEEEcCCCce
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINN-----RAVIKTDILCRNW-VQGNCMYGE-K-CKFLHSWTVGDGFK 141 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~g~-~-d~~i~iwd~~~~~~ 141 (308)
.++++|++.. ++...++.|++||.+ ++...... ..+...+..+++. +++..+.+. . ++.|++|| .++ +
T Consensus 34 ~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g-~ 110 (286)
T 1q7f_A 34 GVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYG-Q 110 (286)
T ss_dssp EEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTS-C
T ss_pred eEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCC-c
Confidence 7899999998 888889999999986 33221111 1122335667774 667664444 2 89999999 455 4
Q ss_pred eeeEee-CcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEeC---CCeeEEE--EcCCCEEEEEc-CCcEEE
Q 021744 142 LLTQLE-GHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINL---GGEVGCM--ISEGPWIFIGV-TNFVKA 214 (308)
Q Consensus 142 ~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~---~~~v~~~--~~~~~~l~~~~-d~~i~~ 214 (308)
.+..+. .+...+..++++++++++++...++.|.+||.. ++.+..+.. ......+ .++++++++.. ++.|++
T Consensus 111 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~ 189 (286)
T 1q7f_A 111 FVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKV 189 (286)
T ss_dssp EEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEE
T ss_pred EEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEE
Confidence 455553 344678999999999988888888999999964 666666642 2234444 46677666665 889999
Q ss_pred EEcCCCceeeeeCC--CCCEEEEEEeCC--EEEEEcCCC-eEEEEEcCCCCcccccceeccccCC--CeEE-EEecCCCe
Q 021744 215 WNTQTNTDLSLSGP--VGQVYAMAVGND--LLFAGTQDG-AILAWKFNVTTNCFEPAASLKVHTD--SNRA-HFSRDVTS 286 (308)
Q Consensus 215 wd~~~~~~~~~~~~--~~~v~~~~~~~~--~l~~g~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~--~v~~-~~s~d~~~ 286 (308)
||........+..+ ...+..++++++ ++++...++ .|.+||... +.+..+..+.. .+.. +++|+|++
T Consensus 190 ~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g-----~~~~~~~~~~~~~~~~~i~~~~~g~l 264 (286)
T 1q7f_A 190 FNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG-----QLISALESKVKHAQCFDVALMDDGSV 264 (286)
T ss_dssp EETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS-----CEEEEEEESSCCSCEEEEEEETTTEE
T ss_pred EcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC-----CEEEEEcccCCCCcceeEEECCCCcE
Confidence 99865443344332 367899999998 666666665 999999643 44455544332 3556 99999987
Q ss_pred EEEeeceEEEEee
Q 021744 287 LLGSVSFIMFIGQ 299 (308)
Q Consensus 287 l~~s~s~~i~~~~ 299 (308)
++++.+..|.++.
T Consensus 265 ~vs~~~~~v~v~~ 277 (286)
T 1q7f_A 265 VLASKDYRLYIYR 277 (286)
T ss_dssp EEEETTTEEEEEE
T ss_pred EEECCCCeEEEEE
Confidence 7775555555544
No 170
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.63 E-value=2.3e-14 Score=122.81 Aligned_cols=223 Identities=9% Similarity=0.059 Sum_probs=143.8
Q ss_pred CCceEEecCCCeEEEeecC-CCCCCCCCcccccCCCCCCccccccceeEEecCCC--e-eecc-------------CCCc
Q 021744 26 GGLSTADTRQKVCNYWRAG-KCNRFPCPYLHRELPLPPAATANGAAAKRFANNTW--G-RNNN-------------FNNH 88 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~-~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~--~-~s~~-------------~d~~ 88 (308)
+.++++++.+ .|++|+.. .+.. ..+.. .+ ..+. ...++|+|+|+ + +++. .+++
T Consensus 51 g~~l~~~~~~-~v~~~~~~~~g~~---~~~~~-~~----~~g~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~ 120 (365)
T 1jof_A 51 RKNIYGAAMK-KWSSFAVKSPTEI---VHEAS-HP----IGGH-PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGY 120 (365)
T ss_dssp SSEEEEEEBT-EEEEEEEEETTEE---EEEEE-EE----CCSS-GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCE
T ss_pred CCEEEEEccc-eEEEEEECCCCCE---EEeeE-ee----cCCC-CccEEECCCCCEEEEEEecCCcceeccceeecCCce
Confidence 5667777777 99999986 4410 00000 00 0111 11589999999 4 4553 6899
Q ss_pred EEEEECCC-CCCcccccce----eeeeeeeeeeecCCce-EEee-CCCeEEEEEcC-CCc-eeeeEee--CcccceEEEE
Q 021744 89 SNNYRAGN-SKNSNINNRA----VIKTDILCRNWVQGNC-MYGE-KCKFLHSWTVG-DGF-KLLTQLE--GHQKVVSGIT 157 (308)
Q Consensus 89 i~vwd~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~g~-~d~~i~iwd~~-~~~-~~~~~~~--~h~~~v~~~~ 157 (308)
+++|+++. ++... .... +...+..+.|+|+|.. +++. .++.|++|++. +++ ..+..+. .|...+..++
T Consensus 121 v~v~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~ 199 (365)
T 1jof_A 121 GNVFSVSETGKLEK-NVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVA 199 (365)
T ss_dssp EEEEEECTTCCEEE-EEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEE
T ss_pred EEEEccCCCCcCcc-eEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeE
Confidence 99999963 43221 1111 2234778899999976 3333 46899999998 662 1123343 2456789999
Q ss_pred EeCCCCEEEEeeC-CCcEEEEeCC--CCeEE---EEEe-C--C----C-------eeE--E-EEcCCCEEEEEc--CC--
Q 021744 158 LPSGSDKLYSGSK-DETVRVWDCA--SGQCA---GVIN-L--G----G-------EVG--C-MISEGPWIFIGV--TN-- 210 (308)
Q Consensus 158 ~~~~~~~l~s~s~-dg~v~~wd~~--~~~~~---~~~~-~--~----~-------~v~--~-~~~~~~~l~~~~--d~-- 210 (308)
|+|+++++++++. ++.|.+|++. +++.. ..+. . . . .+. + +++++++|+++. ++
T Consensus 200 ~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~ 279 (365)
T 1jof_A 200 MHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFE 279 (365)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTT
T ss_pred ECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCC
Confidence 9999999887765 7899999765 56543 2232 1 1 1 232 3 558999887654 33
Q ss_pred ---cEEEEEcC-CCceee----eeCCCCCEEEEEEeC---C--EEEEEcC-CCeEEEEEcCCC
Q 021744 211 ---FVKAWNTQ-TNTDLS----LSGPVGQVYAMAVGN---D--LLFAGTQ-DGAILAWKFNVT 259 (308)
Q Consensus 211 ---~i~~wd~~-~~~~~~----~~~~~~~v~~~~~~~---~--~l~~g~~-dg~i~iwd~~~~ 259 (308)
.|.+|++. +++... ...+...+..++|+| + +|++++. ++.|.+|++...
T Consensus 280 ~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 280 LQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp SCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 89999996 565442 233445567889999 6 7777776 589999999864
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.62 E-value=2.7e-13 Score=125.17 Aligned_cols=264 Identities=8% Similarity=-0.057 Sum_probs=157.6
Q ss_pred CceEEe--cCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEe--cCCCe-eecc--CCCcEEEEECC--C-
Q 021744 27 GLSTAD--TRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFA--NNTWG-RNNN--FNNHSNNYRAG--N- 96 (308)
Q Consensus 27 ~~~~s~--s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s--~~g~~-~s~~--~d~~i~vwd~~--~- 96 (308)
-.+++. +.++..++|....+.. ...+............++.+....++ |||+. +..+ .+..|.+|++. .
T Consensus 36 ~~~~~~~~~~~~~~~l~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~ 114 (662)
T 3azo_A 36 VWWVAPRPAEAGRATLVRRRADGA-EESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGG 114 (662)
T ss_dssp EEEEEEETTTTTEEEEEEECTTSC-EEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTC
T ss_pred EEEEecCcccCCcEEEEEECCCCC-cceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCC
Confidence 344555 5588999998533211 11111100010111112222234455 99886 4333 34556666665 2
Q ss_pred CCCcccccce-----eeeeeeeeeeecCCce-EEeeCC----------CeEEEEEcCC------CceeeeEee-Ccccce
Q 021744 97 SKNSNINNRA-----VIKTDILCRNWVQGNC-MYGEKC----------KFLHSWTVGD------GFKLLTQLE-GHQKVV 153 (308)
Q Consensus 97 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~g~~d----------~~i~iwd~~~------~~~~~~~~~-~h~~~v 153 (308)
++.. .+.. +...+..+.|+|+|.. ++++.+ ..|++||+.+ + + ...+. .+...+
T Consensus 115 ~~~~--~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~-~~~l~~~~~~~~ 190 (662)
T 3azo_A 115 AVPR--PLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRS-A-VRELSDDAHRFV 190 (662)
T ss_dssp CCCE--ECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGG-G-SEESSCSCSSEE
T ss_pred CCCE--eccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCC-c-eeEEEecCCCcc
Confidence 3322 1222 3455778999999976 556655 5899999988 5 3 34455 566788
Q ss_pred EEEEEeCCCCEEEEeeCCC--------cEEEEeCC-CC---eEEEEEe-CCCeeEEE--EcCCCEEEEEc-CC--cEEEE
Q 021744 154 SGITLPSGSDKLYSGSKDE--------TVRVWDCA-SG---QCAGVIN-LGGEVGCM--ISEGPWIFIGV-TN--FVKAW 215 (308)
Q Consensus 154 ~~~~~~~~~~~l~s~s~dg--------~v~~wd~~-~~---~~~~~~~-~~~~v~~~--~~~~~~l~~~~-d~--~i~~w 215 (308)
..++|+|||++|+.++.++ .|++||+. ++ +...... +...+..+ ++++++++++. ++ .|.+|
T Consensus 191 ~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~ 270 (662)
T 3azo_A 191 TGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRV 270 (662)
T ss_dssp CCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEE
T ss_pred cCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEE
Confidence 8999999999998887553 79999999 56 4443333 34444443 57899777666 66 67777
Q ss_pred EcCCCceeeeeCCCCC---------EEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEEEEecCC
Q 021744 216 NTQTNTDLSLSGPVGQ---------VYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRAHFSRDV 284 (308)
Q Consensus 216 d~~~~~~~~~~~~~~~---------v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~s~d~ 284 (308)
|+.+++...+..+... +.+++|+|+ ++++++. +.++||.+.... ..+..+..+...+...+++++
T Consensus 271 ~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~---~~~~~l~~~~~~~~~~~s~~~ 346 (662)
T 3azo_A 271 DPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPES---GELVDAAGPWTEWAATLTVSG 346 (662)
T ss_dssp CTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTT---TEEEECCSSCCEEEEEEEEET
T ss_pred ECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCC---CcEEEecCCCCeEEEEEecCC
Confidence 8777776644333221 467889887 7888888 999999544321 225566666555554337777
Q ss_pred CeEE-Eee----ceEEEEee
Q 021744 285 TSLL-GSV----SFIMFIGQ 299 (308)
Q Consensus 285 ~~l~-~s~----s~~i~~~~ 299 (308)
..++ ++. ...||...
T Consensus 347 ~~~~~~~~~~~~~~~i~~~d 366 (662)
T 3azo_A 347 TRAVGVAASPRTAYEVVELD 366 (662)
T ss_dssp TEEEEEEEETTEEEEEEEEE
T ss_pred CEEEEEEcCCCCCCEEEEEE
Confidence 6554 332 34677765
No 172
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.62 E-value=1.8e-13 Score=127.14 Aligned_cols=224 Identities=7% Similarity=-0.060 Sum_probs=151.5
Q ss_pred eeEEecCCCe-e-----eccCCCcEEEEECCCCCCc-ccccceeeeeeeeeeeecCCce-EEeeCCCe------------
Q 021744 71 AKRFANNTWG-R-----NNNFNNHSNNYRAGNSKNS-NINNRAVIKTDILCRNWVQGNC-MYGEKCKF------------ 130 (308)
Q Consensus 71 ~i~~s~~g~~-~-----s~~~d~~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~------------ 130 (308)
.++|||||++ | .|+.+.+|++||+++++.. ...... .....+.|+|+|.. ++++.|..
T Consensus 125 ~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~ 202 (695)
T 2bkl_A 125 TWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEG--GKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYT 202 (695)
T ss_dssp EEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSC--CTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGC
T ss_pred EEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCc--ccccceEEecCCCEEEEEEecCCCCCccccCCCCC
Confidence 7899999998 6 5666789999999988754 211111 11257889999975 66666655
Q ss_pred -EEEEEcCCCc---eeeeEeeCcccceEEEEEeCCCCEEEEeeCCC----cEEEEeCCCCeEEEEEeCCC-eeEEEEcCC
Q 021744 131 -LHSWTVGDGF---KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDE----TVRVWDCASGQCAGVINLGG-EVGCMISEG 201 (308)
Q Consensus 131 -i~iwd~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg----~v~~wd~~~~~~~~~~~~~~-~v~~~~~~~ 201 (308)
|++|++.++. ..+.....|...+..+.|+||+++|+..+.++ .|.+|+..+++......... ....+++++
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~g 282 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHAWKD 282 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEEETT
T ss_pred EEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEecCC
Confidence 9999998873 13334444667889999999999988877666 67778776665444444333 333445777
Q ss_pred CEEEEEc----CCcEEEEEcCCCce---eeeeCC--CCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCCCcccccceeccc
Q 021744 202 PWIFIGV----TNFVKAWNTQTNTD---LSLSGP--VGQVYAMAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAASLKV 271 (308)
Q Consensus 202 ~~l~~~~----d~~i~~wd~~~~~~---~~~~~~--~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~ 271 (308)
++++.+. ++.|.+||+.+++. ..+..+ ...+..++++.+ ++++...|+..++|.+.... +....+..
T Consensus 283 ~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g---~~~~~l~~ 359 (695)
T 2bkl_A 283 RFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKG---KPVRTVQL 359 (695)
T ss_dssp EEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTC---CEEEECCC
T ss_pred cEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCC---CeeEEecC
Confidence 7444443 46899999988753 444333 446888999866 88888999998888765321 33444554
Q ss_pred c-CCCeEE-EEecCCCeEEEee-----ceEEEEee
Q 021744 272 H-TDSNRA-HFSRDVTSLLGSV-----SFIMFIGQ 299 (308)
Q Consensus 272 ~-~~~v~~-~~s~d~~~l~~s~-----s~~i~~~~ 299 (308)
+ ...+.. +++|+++.++.+. ...+|.+.
T Consensus 360 ~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d 394 (695)
T 2bkl_A 360 PGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTS 394 (695)
T ss_dssp SSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEE
T ss_pred CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEE
Confidence 4 455666 8899987776333 35676665
No 173
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.61 E-value=1.1e-13 Score=119.28 Aligned_cols=222 Identities=9% Similarity=0.000 Sum_probs=139.6
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCCCccccc--ce-eee-e-eee-------------eeeecCCce-EEe-----
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINN--RA-VIK-T-DIL-------------CRNWVQGNC-MYG----- 125 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~--~~-~~~-~-~~~-------------~~~~~~~~~-~~g----- 125 (308)
.+.|+|+|+. +..+.++.|.+||+.+++...... .. ... . +.. +.++|++.. +..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~ 164 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHT 164 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHT
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccC
Confidence 3789999999 888888899999998765321111 00 000 0 000 345666654 222
Q ss_pred eCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeC-CCCEEEEeeCC------CcEEEEeCCCCeEEEEEeCC-C-eeE-
Q 021744 126 EKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPS-GSDKLYSGSKD------ETVRVWDCASGQCAGVINLG-G-EVG- 195 (308)
Q Consensus 126 ~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~d------g~v~~wd~~~~~~~~~~~~~-~-~v~- 195 (308)
..+..|++||+.++ +... +..+...+..+.|+| ++..|+..+.+ ..|.+||+..++........ . .+.
T Consensus 165 ~~~~~l~~~d~~~g-~~~~-~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~ 242 (396)
T 3c5m_A 165 NPTCRLIKVDIETG-ELEV-IHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTH 242 (396)
T ss_dssp CCCEEEEEEETTTC-CEEE-EEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEE
T ss_pred CCcceEEEEECCCC-cEEe-eccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccc
Confidence 46678999999887 4433 335677889999999 78777666543 36888998766533322221 1 233
Q ss_pred -EEEcCCCEEEEE-cC-----CcEEEEEcCCCceeeeeCCCCCEEEEEEeC-C--EEEEEc----------------CCC
Q 021744 196 -CMISEGPWIFIG-VT-----NFVKAWNTQTNTDLSLSGPVGQVYAMAVGN-D--LLFAGT----------------QDG 249 (308)
Q Consensus 196 -~~~~~~~~l~~~-~d-----~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~-~--~l~~g~----------------~dg 249 (308)
.++++++.|+.. .+ +.|++||+.+++...+..... .. +.|+| + ++++++ .+.
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~ 320 (396)
T 3c5m_A 243 EFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDP 320 (396)
T ss_dssp EEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCC
T ss_pred eEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCC
Confidence 345788876643 32 349999999887664432222 33 88999 7 565543 347
Q ss_pred eEEEEEcCCCCcccccceeccccCC-----------CeEE-EEecCCCeEEEee----ceEEEEeecC
Q 021744 250 AILAWKFNVTTNCFEPAASLKVHTD-----------SNRA-HFSRDVTSLLGSV----SFIMFIGQNN 301 (308)
Q Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~~~-----------~v~~-~~s~d~~~l~~s~----s~~i~~~~~~ 301 (308)
.|++||+.++. ...+..+.. .+.. +|+|||+.|+... ...||....+
T Consensus 321 ~i~~~d~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~ 383 (396)
T 3c5m_A 321 FLYVLNTKAKS-----AQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVP 383 (396)
T ss_dssp EEEEEETTTTB-----CCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred cEEEEecccCc-----eEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEc
Confidence 89999998752 233444433 2455 8999999887443 4567776533
No 174
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.61 E-value=1.5e-13 Score=118.32 Aligned_cols=225 Identities=9% Similarity=-0.077 Sum_probs=146.1
Q ss_pred eEEecCCCe-eeccC-CCc--EEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEe
Q 021744 72 KRFANNTWG-RNNNF-NNH--SNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQL 146 (308)
Q Consensus 72 i~~s~~g~~-~s~~~-d~~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~ 146 (308)
.+|+|||+. +.++. ++. |.+||+++++... ....+...+....|+|++.. +++..++.|++||+.++ +....+
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~-lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g-~~~~~~ 118 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQ-LTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATL-EENVVY 118 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEE-CCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTC-CEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEE-eeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCC-cceeee
Confidence 689999998 66665 664 7888887775432 11222223445689999976 77788899999999988 555555
Q ss_pred eCcccceEEEE--EeCCCCEEEEe----------------------eCCCcEEEEeCCCCeEEEEEeCCCeeEE--EEc-
Q 021744 147 EGHQKVVSGIT--LPSGSDKLYSG----------------------SKDETVRVWDCASGQCAGVINLGGEVGC--MIS- 199 (308)
Q Consensus 147 ~~h~~~v~~~~--~~~~~~~l~s~----------------------s~dg~v~~wd~~~~~~~~~~~~~~~v~~--~~~- 199 (308)
..+...+.... ++|++++++.. ..+..|.+||+.+++..........+.. ++|
T Consensus 119 ~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~ 198 (388)
T 3pe7_A 119 QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPY 198 (388)
T ss_dssp ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETT
T ss_pred echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCC
Confidence 55555554443 48899888742 3457899999999887666555554443 468
Q ss_pred CCCEEEEEc-C------CcEEEEEcCCCceeeeeCCC--CCEEEEEEeCC--EEEE-EcCCC----eEEEEEcCCCCccc
Q 021744 200 EGPWIFIGV-T------NFVKAWNTQTNTDLSLSGPV--GQVYAMAVGND--LLFA-GTQDG----AILAWKFNVTTNCF 263 (308)
Q Consensus 200 ~~~~l~~~~-d------~~i~~wd~~~~~~~~~~~~~--~~v~~~~~~~~--~l~~-g~~dg----~i~iwd~~~~~~~~ 263 (308)
+++.|+... + ..|.++|+.+++...+..+. ..+..+.|+|| .|+. +..++ .|++||+.+++.
T Consensus 199 dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-- 276 (388)
T 3pe7_A 199 DDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN-- 276 (388)
T ss_dssp EEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE--
T ss_pred CCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce--
Confidence 888887543 2 27888898877766555544 35788999999 4443 33222 399999998742
Q ss_pred ccceeccccCCC---eEE-EEecCCCeEEEe----------eceEEEEeec
Q 021744 264 EPAASLKVHTDS---NRA-HFSRDVTSLLGS----------VSFIMFIGQN 300 (308)
Q Consensus 264 ~~~~~~~~~~~~---v~~-~~s~d~~~l~~s----------~s~~i~~~~~ 300 (308)
+.+..+..+... ... .|+|||+.|+.+ ....||++..
T Consensus 277 ~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~ 327 (388)
T 3pe7_A 277 RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNM 327 (388)
T ss_dssp EEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEET
T ss_pred EEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEec
Confidence 334343331111 122 699999988743 2446766653
No 175
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.60 E-value=1.2e-13 Score=113.68 Aligned_cols=207 Identities=11% Similarity=0.007 Sum_probs=141.5
Q ss_pred CCCCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc-eeEEecCCCe-eeccCCCcEEEEECCCCCCc
Q 021744 23 GGGGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA-AKRFANNTWG-RNNNFNNHSNNYRAGNSKNS 100 (308)
Q Consensus 23 ~~~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~-~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~ 100 (308)
+.++.+|++++.|+.|.+||..+++ .+.. .+... .... .++++|+|++ + +.++.|..||. +++.+
T Consensus 2 ~~~~~~lv~~~~~~~v~~~d~~tG~-----~~w~-~~~~~----~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~ 68 (276)
T 3no2_A 2 SSPQHLLVGGSGWNKIAIINKDTKE-----IVWE-YPLEK----GWECNSVAATKAGEILF--SYSKGAKMITR-DGREL 68 (276)
T ss_dssp -CCCEEEEECTTCSEEEEEETTTTE-----EEEE-EECCT----TCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEE
T ss_pred CCCCcEEEeeCCCCEEEEEECCCCe-----EEEE-eCCCc----cCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEE
Confidence 5667899999999999999987772 1111 11110 0112 6899999999 6 45788999998 66644
Q ss_pred ccccceeeeeeeeeeeecCCce-EEeeC-CCeEEEEEcCCCceeeeEee------CcccceEEEEEeCCCCEEEEeeCCC
Q 021744 101 NINNRAVIKTDILCRNWVQGNC-MYGEK-CKFLHSWTVGDGFKLLTQLE------GHQKVVSGITLPSGSDKLYSGSKDE 172 (308)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~-~~g~~-d~~i~iwd~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~s~s~dg 172 (308)
..........+..+.+.++|.. ++.+. ++.|..+|. ++ +.+.++. ++......+++.++++++++...++
T Consensus 69 W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~G-k~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~ 146 (276)
T 3no2_A 69 WNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KG-EVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATS 146 (276)
T ss_dssp EEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TS-CEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTT
T ss_pred EEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CC-CEEEEEeccCCCCcccccccCceECCCCCEEEEecCCC
Confidence 3222211234667788899977 44444 677877776 45 4555543 2223456678899999999999999
Q ss_pred cEEEEeCCCCeEEEEEeCCCeeE--EEEcCCCEEEEEc-CCcEEEEEcCCCcee-eeeCCC------CCEEEEEEeCC--
Q 021744 173 TVRVWDCASGQCAGVINLGGEVG--CMISEGPWIFIGV-TNFVKAWNTQTNTDL-SLSGPV------GQVYAMAVGND-- 240 (308)
Q Consensus 173 ~v~~wd~~~~~~~~~~~~~~~v~--~~~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~~------~~v~~~~~~~~-- 240 (308)
.|..||.+ ++.+.++....... ...+++++++++. ++.|..+|..+++.+ ++.... ..+..+...++
T Consensus 147 ~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~ 225 (276)
T 3no2_A 147 EVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGG 225 (276)
T ss_dssp EEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSC
T ss_pred EEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCC
Confidence 99999998 99999998543332 2357788888776 568999999999887 443221 23778888887
Q ss_pred EEEEE
Q 021744 241 LLFAG 245 (308)
Q Consensus 241 ~l~~g 245 (308)
++++.
T Consensus 226 i~v~~ 230 (276)
T 3no2_A 226 LYICN 230 (276)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 44444
No 176
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.60 E-value=6.5e-13 Score=123.68 Aligned_cols=223 Identities=10% Similarity=-0.031 Sum_probs=148.5
Q ss_pred eeEEecCCCe-eeccCC-C----cEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCCCe-------------
Q 021744 71 AKRFANNTWG-RNNNFN-N----HSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKCKF------------- 130 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d-~----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~------------- 130 (308)
.++|||||++ |.++.+ | +|++||+++++.... ......+..+.|+|+|.. +++..++.
T Consensus 129 ~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~--~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~ 206 (710)
T 2xdw_A 129 GYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD--VLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNL 206 (710)
T ss_dssp EEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE--EEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCC
T ss_pred EEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcc--cccCcccceEEEEeCCCEEEEEEECCccccccccccccCC
Confidence 7899999998 544332 2 899999988865422 111222567889999965 66665554
Q ss_pred ---EEEEEcCCCce---eeeEeeCcccceEEEEEeCCCCEEEEeeC-----CCcEEEEeCCC------Ce-EEEEEe-CC
Q 021744 131 ---LHSWTVGDGFK---LLTQLEGHQKVVSGITLPSGSDKLYSGSK-----DETVRVWDCAS------GQ-CAGVIN-LG 191 (308)
Q Consensus 131 ---i~iwd~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-----dg~v~~wd~~~------~~-~~~~~~-~~ 191 (308)
|++|++.++.. .+.....|...+..+.|+||+++|+..+. +..|.+||+.+ ++ ....+. +.
T Consensus 207 ~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~ 286 (710)
T 2xdw_A 207 HQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNF 286 (710)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSS
T ss_pred CCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCC
Confidence 99999988731 22222335566889999999999887764 56899999986 42 234444 33
Q ss_pred C-eeEEEEcCCCEEEE-Ec----CCcEEEEEcCCCce---eeeeCCCC--CEEEEEEeCC--EEEEEcCCCe--EEEEEc
Q 021744 192 G-EVGCMISEGPWIFI-GV----TNFVKAWNTQTNTD---LSLSGPVG--QVYAMAVGND--LLFAGTQDGA--ILAWKF 256 (308)
Q Consensus 192 ~-~v~~~~~~~~~l~~-~~----d~~i~~wd~~~~~~---~~~~~~~~--~v~~~~~~~~--~l~~g~~dg~--i~iwd~ 256 (308)
. ....+.++++.|+. +. ...|.+||+.+++. ..+..+.. .+..++++++ ++++...|+. |.+|++
T Consensus 287 ~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~ 366 (710)
T 2xdw_A 287 EGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDL 366 (710)
T ss_dssp SSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEET
T ss_pred CcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEEC
Confidence 2 23345678887664 33 23699999988742 44555544 6888999955 7778888885 555666
Q ss_pred CCCCcccccceeccccCCCeEE-EEecCCCeEEEee-----ceEEEEee
Q 021744 257 NVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV-----SFIMFIGQ 299 (308)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-----s~~i~~~~ 299 (308)
.++ +.+..+..+...+.. .++|++..++.+. ...+|.+.
T Consensus 367 ~~g----~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d 411 (710)
T 2xdw_A 367 ATG----ALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCD 411 (710)
T ss_dssp TTC----CEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEE
T ss_pred CCC----CEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEE
Confidence 555 445666666667777 8999987666332 34666655
No 177
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.59 E-value=3.1e-13 Score=124.71 Aligned_cols=187 Identities=11% Similarity=0.009 Sum_probs=127.1
Q ss_pred eeEEecCCCe-eeccCC----------CcEEEEECCC------CCCcccccc-eeeeeeeeeeeecCCce-EEeeCC---
Q 021744 71 AKRFANNTWG-RNNNFN----------NHSNNYRAGN------SKNSNINNR-AVIKTDILCRNWVQGNC-MYGEKC--- 128 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d----------~~i~vwd~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~g~~d--- 128 (308)
.++|+|||+. +.++.| .+|.+||+++ ++.. ... .+...+....|+|+|.. ++.+.+
T Consensus 134 ~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~ 211 (662)
T 3azo_A 134 DPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR--ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPR 211 (662)
T ss_dssp EEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE--ESSCSCSSEECCCEECTTSSEEEEEEECTTC
T ss_pred CcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee--EEEecCCCcccCceECCCCCEEEEEECCCCC
Confidence 7899999998 777766 5899999977 4332 222 23345677889999976 445533
Q ss_pred -----CeEEEEEcC-CCc--eeeeEeeCcccceEEEEEeCCCCEEEEeeCCC--cEEEEeCCCCeEEEEEeCCCee----
Q 021744 129 -----KFLHSWTVG-DGF--KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDE--TVRVWDCASGQCAGVINLGGEV---- 194 (308)
Q Consensus 129 -----~~i~iwd~~-~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg--~v~~wd~~~~~~~~~~~~~~~v---- 194 (308)
..|++||+. ++. +......+|...+..++|+||+++++++..++ .|.+||+.+++..........+
T Consensus 212 ~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~ 291 (662)
T 3azo_A 212 MPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPL 291 (662)
T ss_dssp CTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCC
T ss_pred CCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCcc
Confidence 479999998 451 23333344578899999999999888888888 6777777677654433322211
Q ss_pred -------EEEEcCCCEEEEEcCCcEEEE--EcCCCceeeeeCCCCCEEEE-EEeCC--EEEEEcCCCe--EEEEEcCCC
Q 021744 195 -------GCMISEGPWIFIGVTNFVKAW--NTQTNTDLSLSGPVGQVYAM-AVGND--LLFAGTQDGA--ILAWKFNVT 259 (308)
Q Consensus 195 -------~~~~~~~~~l~~~~d~~i~~w--d~~~~~~~~~~~~~~~v~~~-~~~~~--~l~~g~~dg~--i~iwd~~~~ 259 (308)
..+.+++++++++..+.+++| |+.+++...+..+...+..+ +++++ ++++++.+.. |.++|+.++
T Consensus 292 w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g 370 (662)
T 3azo_A 292 WTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTG 370 (662)
T ss_dssp CSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEEEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTC
T ss_pred ccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcEEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 223467888876654777777 77777766777787788888 77777 4455555554 455565554
No 178
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.59 E-value=6e-13 Score=112.83 Aligned_cols=231 Identities=7% Similarity=-0.071 Sum_probs=148.2
Q ss_pred CCeEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCe-eeccCC---C--cEEEEECCCCCCcccccceee
Q 021744 35 QKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWG-RNNNFN---N--HSNNYRAGNSKNSNINNRAVI 108 (308)
Q Consensus 35 d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~-~s~~~d---~--~i~vwd~~~~~~~~~~~~~~~ 108 (308)
+..|++|+...++ + ..+ .....++|+|||+. +..+.+ + .|.+||+++++.. ......
T Consensus 42 ~~~l~~~d~~~~~-----------~--~~l--~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~--~l~~~~ 104 (347)
T 2gop_A 42 ENTIVIENLKNNA-----------R--RFI--ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSK--KILEAK 104 (347)
T ss_dssp EEEEEEEETTTCC-----------E--EEE--ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEE--EEEEES
T ss_pred cceEEEEeCCCCc-----------e--EEc--ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceE--EEEcCC
Confidence 6789999988761 1 011 11116899999998 655543 3 3777788766433 222222
Q ss_pred eeeeeeeeecCCce-EEeeC---------------------------CCeEEEEEcCCCceeeeEeeCcccceEEEEEeC
Q 021744 109 KTDILCRNWVQGNC-MYGEK---------------------------CKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPS 160 (308)
Q Consensus 109 ~~~~~~~~~~~~~~-~~g~~---------------------------d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~ 160 (308)
. +..+.|+|++.. ++.+. ...|++||+.++ +.+..+.. . .+..++|+|
T Consensus 105 ~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~-~~~~~l~~-~-~~~~~~~sp 180 (347)
T 2gop_A 105 N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE-EVIEEFEK-P-RFSSGIWHR 180 (347)
T ss_dssp E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT-EEEEEEEE-E-TTCEEEEET
T ss_pred C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC-eEEeeecC-C-CcccccCCC
Confidence 3 778899999965 44442 367999999888 55345554 4 888999999
Q ss_pred CCCEEEEeeCCC-------cEEEEeCCCCeEEEEEeCCCeeEEEEcCCCEEEEEc-C--------CcEEEEEcCCCceee
Q 021744 161 GSDKLYSGSKDE-------TVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGV-T--------NFVKAWNTQTNTDLS 224 (308)
Q Consensus 161 ~~~~l~s~s~dg-------~v~~wd~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-d--------~~i~~wd~~~~~~~~ 224 (308)
++ .++++..+. ...+|.+.+++....... ..+..++++++.|+... + ..|.+|| +++...
T Consensus 181 dg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~ 256 (347)
T 2gop_A 181 DK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMG 256 (347)
T ss_dssp TE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEE
T ss_pred Ce-EEEEEecccccccccccccEEEeCCCceEEeccC-cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEe
Confidence 99 777776542 334444435554433334 44445578998777543 2 3688888 555554
Q ss_pred e-eCCCCCEEE-EEEeCC-EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee----ceEEE
Q 021744 225 L-SGPVGQVYA-MAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV----SFIMF 296 (308)
Q Consensus 225 ~-~~~~~~v~~-~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~----s~~i~ 296 (308)
+ ..+...+.. +.|+ + ++++++.++.++|| +.++ +. ..+..+...+.. +|+| .++++.. ...||
T Consensus 257 l~~~~~~~~~~~~~~s-dg~~~~~~~~~~~~l~-~~~g----~~-~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~ 327 (347)
T 2gop_A 257 ILDEVDRGVGQAKIKD-GKVYFTLFEEGSVNLY-IWDG----EI-KPIAKGRHWIMGFDVDE--IVVYLKETATRLRELF 327 (347)
T ss_dssp SSTTCCSEEEEEEEET-TEEEEEEEETTEEEEE-EESS----SE-EEEECSSSEEEEEEESS--SEEEEEECSSSCCEEE
T ss_pred ccccCCcccCCccEEc-CcEEEEEecCCcEEEE-EcCC----ce-EEEecCCCeEEeeeeeC--cEEEEEcCCCChHHhe
Confidence 3 445667876 8999 8 88899999999999 8743 33 333345667777 9998 4554433 23677
Q ss_pred Eee
Q 021744 297 IGQ 299 (308)
Q Consensus 297 ~~~ 299 (308)
...
T Consensus 328 ~~~ 330 (347)
T 2gop_A 328 TWD 330 (347)
T ss_dssp EES
T ss_pred EeC
Confidence 764
No 179
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.58 E-value=1.2e-12 Score=107.76 Aligned_cols=203 Identities=9% Similarity=-0.045 Sum_probs=148.6
Q ss_pred Ce-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCcc-cceEEE
Q 021744 79 WG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQ-KVVSGI 156 (308)
Q Consensus 79 ~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~-~~v~~~ 156 (308)
+. ++++.|+.|.+||.++++.+..........+..+.+.|+|..+. +.++.|+.||. ++ +.+..+..+. ..+.++
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G-~~~W~~~~~~~~~~~~~ 82 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DG-RELWNIAAPAGCEMQTA 82 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TS-CEEEEEECCTTCEEEEE
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CC-CEEEEEcCCCCcccccc
Confidence 45 89999999999999888765322221112467778899998855 56788999999 77 6788887653 578889
Q ss_pred EEeCCCCEEEEeeC-CCcEEEEeCCCCeEEEEEeCCCe---------eEEEEcCCCEEEEEc-CCcEEEEEcCCCcee-e
Q 021744 157 TLPSGSDKLYSGSK-DETVRVWDCASGQCAGVINLGGE---------VGCMISEGPWIFIGV-TNFVKAWNTQTNTDL-S 224 (308)
Q Consensus 157 ~~~~~~~~l~s~s~-dg~v~~wd~~~~~~~~~~~~~~~---------v~~~~~~~~~l~~~~-d~~i~~wd~~~~~~~-~ 224 (308)
.+.++++.+++.+. ++.|..+|. +++.+..+..... .....++++++++.. ++.|..||.. ++.+ +
T Consensus 83 ~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~ 160 (276)
T 3no2_A 83 RILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNS 160 (276)
T ss_dssp EECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred EECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEE
Confidence 99999999999887 788888885 6888877762211 123457899998876 8899999998 7777 5
Q ss_pred eeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccC------CCeEE-EEecCCCeEEEee
Q 021744 225 LSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHT------DSNRA-HFSRDVTSLLGSV 291 (308)
Q Consensus 225 ~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~------~~v~~-~~s~d~~~l~~s~ 291 (308)
+... ..+.++...++ ++++++.+++|..+|..++ +.+.++..+. ..+.. ...++|..++++.
T Consensus 161 ~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG----~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 161 VKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESN----RIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTC----CEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCC----cEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 5443 45566777777 7788888889999999987 5555554221 22555 7788998888763
No 180
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.57 E-value=1e-12 Score=110.83 Aligned_cols=213 Identities=9% Similarity=0.041 Sum_probs=139.0
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCceEEe-eCC----CeEEEEEcCCCceeee
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNCMYG-EKC----KFLHSWTVGDGFKLLT 144 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~d----~~i~iwd~~~~~~~~~ 144 (308)
.++|+|+|.+ +++..++.|.+||.++++..... ..+...+..+.+.+++..+.+ ..+ +.|.+||..++ +...
T Consensus 49 ~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~-~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~-~~~~ 126 (333)
T 2dg1_A 49 GLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF-VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD-NLQD 126 (333)
T ss_dssp EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE-ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC-SCEE
T ss_pred CcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe-eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCC-EEEE
Confidence 6899999999 88889999999999776533111 122344778889999977444 444 58999999877 3332
Q ss_pred Eee--CcccceEEEEEeCCCCEEEEeeC------CCcEEEEeCCCCeEEEEEeCCCeeEE--EEcCCCEEEE-Ec-CCcE
Q 021744 145 QLE--GHQKVVSGITLPSGSDKLYSGSK------DETVRVWDCASGQCAGVINLGGEVGC--MISEGPWIFI-GV-TNFV 212 (308)
Q Consensus 145 ~~~--~h~~~v~~~~~~~~~~~l~s~s~------dg~v~~wd~~~~~~~~~~~~~~~v~~--~~~~~~~l~~-~~-d~~i 212 (308)
.+. .+...+..++++|+++++++... .+.|..+|..+++............. +.++++.+++ .. ++.|
T Consensus 127 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i 206 (333)
T 2dg1_A 127 IIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRL 206 (333)
T ss_dssp EECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEE
T ss_pred EEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeE
Confidence 222 24457899999999988777654 35677777665554433332222333 3578886654 44 7899
Q ss_pred EEEEcCC-Ccee-e--------eeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccCC------
Q 021744 213 KAWNTQT-NTDL-S--------LSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTD------ 274 (308)
Q Consensus 213 ~~wd~~~-~~~~-~--------~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~------ 274 (308)
.+||+.+ +... . +.++ ..+..++++++ ++++...++.|.+||... +.+..+..+..
T Consensus 207 ~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g-----~~~~~~~~~~~~~g~~~ 280 (333)
T 2dg1_A 207 HRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRG-----YPIGQILIPGRDEGHML 280 (333)
T ss_dssp EEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTTS-----CEEEEEECTTGGGTCSC
T ss_pred EEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCCC-----CEEEEEEcCCCcccccc
Confidence 9999964 3221 1 1122 46788999998 556666678999999843 33444443322
Q ss_pred CeEE-EEecCCCeEEEee
Q 021744 275 SNRA-HFSRDVTSLLGSV 291 (308)
Q Consensus 275 ~v~~-~~s~d~~~l~~s~ 291 (308)
.+.. +|+||++.|+.+.
T Consensus 281 ~~~~~~~~~dg~~L~v~~ 298 (333)
T 2dg1_A 281 RSTHPQFIPGTNQLIICS 298 (333)
T ss_dssp BCCEEEECTTSCEEEEEE
T ss_pred CcceEEECCCCCEEEEEe
Confidence 4666 9999987665433
No 181
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.57 E-value=1.4e-11 Score=103.84 Aligned_cols=255 Identities=7% Similarity=-0.054 Sum_probs=158.5
Q ss_pred CCCeEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeee
Q 021744 34 RQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDI 112 (308)
Q Consensus 34 ~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 112 (308)
.+++|.++|..++......+.... .. ..|.....+.+. ++.. ++...+++|.+||..+++.+... .......
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n---~~-~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i--~~~~~p~ 87 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRAN---GF-KLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRI--TGFTSPR 87 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHH---SS-CCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEE--ECCSSEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhc---Cc-ccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEc--CCCCCCc
Confidence 488999999887621110000000 00 111111246663 3334 77777899999999888765332 2223466
Q ss_pred eeeeecCCceEEee-CCCeEEEEEcCCCceeeeEeeCcc-----cceEEEEEeCCCCEEEEee-CCCcEEEEeCCCCeEE
Q 021744 113 LCRNWVQGNCMYGE-KCKFLHSWTVGDGFKLLTQLEGHQ-----KVVSGITLPSGSDKLYSGS-KDETVRVWDCASGQCA 185 (308)
Q Consensus 113 ~~~~~~~~~~~~g~-~d~~i~iwd~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~l~s~s-~dg~v~~wd~~~~~~~ 185 (308)
.+.+++++....+. .++.|.+||+.++ +....+.... .....+++ .++..+++.. .++.|.++|+++++.+
T Consensus 88 ~i~~~~~g~lyv~~~~~~~v~~iD~~t~-~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~ 165 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQIWDYRIFIINPKTY-EITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVV 165 (328)
T ss_dssp EEEEEETTEEEEEEBSCSEEEEEETTTT-EEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEE
T ss_pred EEEEeCCCeEEEEECCCCeEEEEECCCC-eEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEE
Confidence 77887888664444 7899999999998 6666665332 14567777 3344444443 4899999999999998
Q ss_pred EEEeCCCeeE--EEEcCCCEEEEEc-C----------CcEEEEEcCCCcee-eeeCC-CCCEEEEEEeCC--EEEEEcCC
Q 021744 186 GVINLGGEVG--CMISEGPWIFIGV-T----------NFVKAWNTQTNTDL-SLSGP-VGQVYAMAVGND--LLFAGTQD 248 (308)
Q Consensus 186 ~~~~~~~~v~--~~~~~~~~l~~~~-d----------~~i~~wd~~~~~~~-~~~~~-~~~v~~~~~~~~--~l~~g~~d 248 (308)
..+....... .+.+++++++++. + +.|.++|..+++.. .+... ......++++|+ .|.++..
T Consensus 166 ~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~- 244 (328)
T 3dsm_A 166 DELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN- 244 (328)
T ss_dssp EEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-
T ss_pred EEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-
Confidence 8887433333 3356788766654 3 68999999998876 44322 236899999997 6655544
Q ss_pred CeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeE-EEe-----eceEEEEeecC
Q 021744 249 GAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSL-LGS-----VSFIMFIGQNN 301 (308)
Q Consensus 249 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l-~~s-----~s~~i~~~~~~ 301 (308)
.|.+||..+++. .....+......... +++|++..| ++. .+..|+++..+
T Consensus 245 -~v~~~d~~t~~~--~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 245 -DIWRMPVEADRV--PVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp -SEEEEETTCSSC--CSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred -EEEEEECCCCce--eeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 899999987632 111112222345666 999954444 443 25666666544
No 182
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.56 E-value=1.2e-12 Score=110.60 Aligned_cols=225 Identities=7% Similarity=-0.051 Sum_probs=153.2
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc-eeEEecCCCe-eeccCCCcEEEEECCCCCCccc
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA-AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNI 102 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~-~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~ 102 (308)
++.++++...++.|.+||..++.. +.. . .....+ .+++++++.. ++...++.|.+||..+++....
T Consensus 53 ~~~lyv~~~~~~~v~viD~~t~~~-----~~~-i------~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~ 120 (328)
T 3dsm_A 53 DGIGWIVVNNSHVIFAIDINTFKE-----VGR-I------TGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGY 120 (328)
T ss_dssp TTEEEEEEGGGTEEEEEETTTCCE-----EEE-E------ECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEE
T ss_pred CCEEEEEEcCCCEEEEEECcccEE-----EEE-c------CCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEE
Confidence 355777777889999999987711 100 1 111222 7899999966 6666899999999987764422
Q ss_pred cccee----eeeeeeeeeecCCce-EEee-CCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCC-----
Q 021744 103 NNRAV----IKTDILCRNWVQGNC-MYGE-KCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKD----- 171 (308)
Q Consensus 103 ~~~~~----~~~~~~~~~~~~~~~-~~g~-~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d----- 171 (308)
...+. ......+.+ ..+.. ++.. .++.|.++|+.++ +.+..+... .....++++|++++++++..+
T Consensus 121 i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~-~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~ 197 (328)
T 3dsm_A 121 IECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETD-KVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSP 197 (328)
T ss_dssp EECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTT-EEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCS
T ss_pred EEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCC-eEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCc
Confidence 11111 002333444 44555 4433 4889999999998 677666643 345788999999877777655
Q ss_pred -----CcEEEEeCCCCeEEEEEeC--CCeeEE--EEcCCCEEEEEcCCcEEEEEcCCCcee--e-eeCCCCCEEEEEEeC
Q 021744 172 -----ETVRVWDCASGQCAGVINL--GGEVGC--MISEGPWIFIGVTNFVKAWNTQTNTDL--S-LSGPVGQVYAMAVGN 239 (308)
Q Consensus 172 -----g~v~~wd~~~~~~~~~~~~--~~~v~~--~~~~~~~l~~~~d~~i~~wd~~~~~~~--~-~~~~~~~v~~~~~~~ 239 (308)
+.|.++|..+++....+.. ...... +.+++++|+++.. .|.+||..+++.. . +.........++++|
T Consensus 198 ~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp 276 (328)
T 3dsm_A 198 YGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNP 276 (328)
T ss_dssp SCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-SEEEEETTCSSCCSSCSBCCCSSCEEEEEECT
T ss_pred cccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-EEEEEECCCCceeeeeeecCCCCceEEEEEcC
Confidence 7899999999998877764 223333 3567888887655 9999999988764 1 222245789999998
Q ss_pred C---EEEEE----cCCCeEEEEEcCCCCcccccceecc
Q 021744 240 D---LLFAG----TQDGAILAWKFNVTTNCFEPAASLK 270 (308)
Q Consensus 240 ~---~l~~g----~~dg~i~iwd~~~~~~~~~~~~~~~ 270 (308)
+ ++++. ..++.|.+||.. + +.+.++.
T Consensus 277 ~~g~lyva~~~~y~~~~~V~v~d~~-g----~~~~~i~ 309 (328)
T 3dsm_A 277 NNGEVYVADAIDYQQQGIVYRYSPQ-G----KLIDEFY 309 (328)
T ss_dssp TTCCEEEEECTTSSSEEEEEEECTT-C----CEEEEEE
T ss_pred CCCeEEEEcccccccCCEEEEECCC-C----CEEEEEE
Confidence 4 55665 678999999988 5 5556554
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.55 E-value=2e-12 Score=107.30 Aligned_cols=217 Identities=10% Similarity=0.035 Sum_probs=144.7
Q ss_pred eeEEecCCC-e-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCceEEe-eCCCeEEEEEcCCCceeeeEee
Q 021744 71 AKRFANNTW-G-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNCMYG-EKCKFLHSWTVGDGFKLLTQLE 147 (308)
Q Consensus 71 ~i~~s~~g~-~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~d~~i~iwd~~~~~~~~~~~~ 147 (308)
.++|+|+|+ . +++..++.|..||.+++ . .....+...+..+.+.+++.++.+ ..++.|.+||..++ +......
T Consensus 32 g~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~--~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g-~~~~~~~ 107 (296)
T 3e5z_A 32 GPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L--SPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGG-EWESIAD 107 (296)
T ss_dssp EEEEEGGGTEEEEEEGGGTEEEEEETTSC-E--EEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTC-CEEEEEC
T ss_pred CCeEeCCCCEEEEEeCCCCEEEEEECCCC-e--EEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCC-cEEEEee
Confidence 789999999 5 88888999999999765 2 122223344778889999987444 45689999999777 3332221
Q ss_pred Cc----ccceEEEEEeCCCCEEEE----ee-------------CCCcEEEEeCCCCeEEEEEeCCCeeE--EEEcCCCEE
Q 021744 148 GH----QKVVSGITLPSGSDKLYS----GS-------------KDETVRVWDCASGQCAGVINLGGEVG--CMISEGPWI 204 (308)
Q Consensus 148 ~h----~~~v~~~~~~~~~~~l~s----~s-------------~dg~v~~wd~~~~~~~~~~~~~~~v~--~~~~~~~~l 204 (308)
.. ...+..++++|+++++++ ++ ..+.|..++.. ++............ ++.++++.+
T Consensus 108 ~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~l 186 (296)
T 3e5z_A 108 SFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLL 186 (296)
T ss_dssp EETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEE
T ss_pred ccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEE
Confidence 11 134678999999998887 33 13456666655 54433333333333 335789888
Q ss_pred EEEc-CCcEEEEEcC-CCce---e-eeeCCCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeE
Q 021744 205 FIGV-TNFVKAWNTQ-TNTD---L-SLSGPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNR 277 (308)
Q Consensus 205 ~~~~-d~~i~~wd~~-~~~~---~-~~~~~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~ 277 (308)
++.. ++.|.+||+. +++. . .+..+...+..++++++ .+..+. ++.|.+||... +.+..+..+.. +.
T Consensus 187 v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~g-----~~~~~~~~~~~-~~ 259 (296)
T 3e5z_A 187 VSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPDG-----DELGRVLTPQT-TS 259 (296)
T ss_dssp EEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTTS-----CEEEEEECSSC-CC
T ss_pred EEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCCC-----CEEEEEECCCC-ce
Confidence 6555 7899999997 5554 2 23334456678999998 444444 78999999863 55666666666 66
Q ss_pred E-EE-ecCCCeEEEeeceEEEEee
Q 021744 278 A-HF-SRDVTSLLGSVSFIMFIGQ 299 (308)
Q Consensus 278 ~-~~-s~d~~~l~~s~s~~i~~~~ 299 (308)
. +| +|+++.|.++....+|...
T Consensus 260 ~~~f~~~d~~~L~v~t~~~l~~~~ 283 (296)
T 3e5z_A 260 NLCFGGPEGRTLYMTVSTEFWSIE 283 (296)
T ss_dssp EEEEESTTSCEEEEEETTEEEEEE
T ss_pred eEEEECCCCCEEEEEcCCeEEEEE
Confidence 6 89 5888888766655565544
No 184
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.54 E-value=4.5e-13 Score=115.48 Aligned_cols=225 Identities=6% Similarity=-0.129 Sum_probs=138.8
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc-------------eeEEecCCCe-eec-----cC
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA-------------AKRFANNTWG-RNN-----NF 85 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~-------------~i~~s~~g~~-~s~-----~~ 85 (308)
.+..|+..+.++.|++|+...+.. ..+.. .+......+..-. .+.++|+++. +.. ..
T Consensus 91 dg~~l~~~~~~~~l~~~d~~~~~~---~~~~~-~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~ 166 (396)
T 3c5m_A 91 DERAFFYVKNELNLMKVDLETLEE---QVIYT-VDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNP 166 (396)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCE---EEEEE-CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCC
T ss_pred CCCEEEEEEcCCcEEEEECCCCCc---EEEEe-cccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCC
Confidence 367888888889999999877621 11111 0000000000000 0456888887 443 46
Q ss_pred CCcEEEEECCCCCCcccccceeeeeeeeeeeec-CCc-eEEeeCC------CeEEEEEcCCCceeeeEeeCc--ccceEE
Q 021744 86 NNHSNNYRAGNSKNSNINNRAVIKTDILCRNWV-QGN-CMYGEKC------KFLHSWTVGDGFKLLTQLEGH--QKVVSG 155 (308)
Q Consensus 86 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~g~~d------~~i~iwd~~~~~~~~~~~~~h--~~~v~~ 155 (308)
+..|.+||+.+++.. ....+...+..+.|+| ++. +++.+.+ ..|.+|++.++ +. ..+..+ ...+..
T Consensus 167 ~~~l~~~d~~~g~~~--~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~-~~-~~l~~~~~~~~~~~ 242 (396)
T 3c5m_A 167 TCRLIKVDIETGELE--VIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS-NV-RKIKEHAEGESCTH 242 (396)
T ss_dssp CEEEEEEETTTCCEE--EEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC-CC-EESSCCCTTEEEEE
T ss_pred cceEEEEECCCCcEE--eeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC-ce-eEeeccCCCccccc
Confidence 678999999877543 2223334467788999 665 3443332 46888998765 32 233323 235788
Q ss_pred EEEeCCCCEEEEeeCC-----CcEEEEeCCCCeEEEEEeCCCeeEEEEc-CCCEEEEEc-----------------CCcE
Q 021744 156 ITLPSGSDKLYSGSKD-----ETVRVWDCASGQCAGVINLGGEVGCMIS-EGPWIFIGV-----------------TNFV 212 (308)
Q Consensus 156 ~~~~~~~~~l~s~s~d-----g~v~~wd~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~-----------------d~~i 212 (308)
++|+|+++.|+..+.+ +.|++||+.+++.............+++ ++++++.+. +..|
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i 322 (396)
T 3c5m_A 243 EFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCSHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFL 322 (396)
T ss_dssp EEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEEEEEECSSSSEEEEEECCC----------CCCCCCEE
T ss_pred eEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCCCCCccCCCCceEEEecCCcceeeccccccccCCCCcE
Confidence 9999999988776554 4599999998876554433332244567 899877532 3689
Q ss_pred EEEEcCCCceeeeeCCCC-----------CEEEEEEeCC--EEEEE-cCCCeEEEEEcC
Q 021744 213 KAWNTQTNTDLSLSGPVG-----------QVYAMAVGND--LLFAG-TQDGAILAWKFN 257 (308)
Q Consensus 213 ~~wd~~~~~~~~~~~~~~-----------~v~~~~~~~~--~l~~g-~~dg~i~iwd~~ 257 (308)
++||+.+++...+..+.. .+..++|+|+ .|+.. ..++...+|.+.
T Consensus 323 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 323 YVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp EEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred EEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 999999887766655544 2566889998 55544 445655555443
No 185
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.52 E-value=2.9e-11 Score=109.07 Aligned_cols=251 Identities=7% Similarity=-0.110 Sum_probs=165.1
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCe-eeccCCCcEEEEECC--CCCCccc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWG-RNNNFNNHSNNYRAG--NSKNSNI 102 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~-~s~~~d~~i~vwd~~--~~~~~~~ 102 (308)
+.++++...+++|.++|..++ ........|.....+.|+|||++ ++++.|+.|.+||+. +.+...
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~-----------~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~- 234 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTY-----------EIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVA- 234 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTC-----------CEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEE-
T ss_pred ceEEEEeCCCCeEEEEECCCC-----------eEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeE-
Confidence 467788888999999998876 11111111111116899999999 778899999999995 554332
Q ss_pred ccceeeeeeeeeeee----cCCce--EEeeCCCeEEEEEcCCCceeeeEeeC----------ccc-ceEEEEEeCCCC-E
Q 021744 103 NNRAVIKTDILCRNW----VQGNC--MYGEKCKFLHSWTVGDGFKLLTQLEG----------HQK-VVSGITLPSGSD-K 164 (308)
Q Consensus 103 ~~~~~~~~~~~~~~~----~~~~~--~~g~~d~~i~iwd~~~~~~~~~~~~~----------h~~-~v~~~~~~~~~~-~ 164 (308)
..........+.++ |+|.. ++...++.|.++|..+. +.+..+.- |.. .+..+..++++. .
T Consensus 235 -~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~-~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~ 312 (567)
T 1qks_A 235 -EIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL-EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEF 312 (567)
T ss_dssp -EEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC-CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEE
T ss_pred -EEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCC-cEEEEEeccccccccccccCCCceEEEEEcCCCCEE
Confidence 11112235678888 68866 44556799999999888 66666542 222 577888888765 4
Q ss_pred EEEeeCCCcEEEEeCCCCeEE--EEEeCCCeeE--EEEcCCCEEEEEc--CCcEEEEEcCCCcee-eeeC-----CCCCE
Q 021744 165 LYSGSKDETVRVWDCASGQCA--GVINLGGEVG--CMISEGPWIFIGV--TNFVKAWNTQTNTDL-SLSG-----PVGQV 232 (308)
Q Consensus 165 l~s~s~dg~v~~wd~~~~~~~--~~~~~~~~v~--~~~~~~~~l~~~~--d~~i~~wd~~~~~~~-~~~~-----~~~~v 232 (308)
+++...+|.|.++|..+.+.+ ..+....... .+.+++++++++. ++.|.++|+.+++.. .+.. |.+.-
T Consensus 313 vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g 392 (567)
T 1qks_A 313 IVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRG 392 (567)
T ss_dssp EEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTC
T ss_pred EEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccc
Confidence 566677899999999876433 2333333322 3468899887654 789999999999876 3322 33222
Q ss_pred EEEEEeCC---EEEEEc-CCCeEEEEEcCCCC---cccccceeccccCCC-eEEEEecCCCeEEEee
Q 021744 233 YAMAVGND---LLFAGT-QDGAILAWKFNVTT---NCFEPAASLKVHTDS-NRAHFSRDVTSLLGSV 291 (308)
Q Consensus 233 ~~~~~~~~---~l~~g~-~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~-v~~~~s~d~~~l~~s~ 291 (308)
..+ ++|+ .++++. .++.|.++|..+.+ ..++.++++...... +....+|++++|.++.
T Consensus 393 ~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~ 458 (567)
T 1qks_A 393 ANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDA 458 (567)
T ss_dssp EEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEEC
T ss_pred eee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEec
Confidence 222 5786 445543 46899999998732 113566777654333 3337899999988754
No 186
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.50 E-value=1.3e-10 Score=96.00 Aligned_cols=251 Identities=12% Similarity=0.048 Sum_probs=157.8
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc-eeEEecCCCe-eeccCCCcEEEEECCCCCCcccc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA-AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNIN 103 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~-~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~ 103 (308)
+.+.++...++.|.+|+.. +. +.....+ . ..... .+++.++|.. ++...++.|..||.+ ++.....
T Consensus 26 g~l~v~~~~~~~v~~~d~~-~~-----~~~~~~~--~---~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~ 93 (299)
T 2z2n_A 26 GKVWITQHKANMISCINLD-GK-----ITEYPLP--T---PDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYT 93 (299)
T ss_dssp SCEEEEETTTTEEEEECTT-CC-----EEEEECS--S---TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEE
T ss_pred CCEEEEecCCCcEEEEcCC-CC-----eEEecCC--c---ccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEe
Confidence 4566666668899999877 41 1100001 0 01122 7899999998 777778889999975 3211111
Q ss_pred cceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCC
Q 021744 104 NRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG 182 (308)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~ 182 (308)
.......+..+.+.+++.. ++...++.|.+||. ++......+..+...+..+++++++...++...++.|..||. ++
T Consensus 94 ~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g 171 (299)
T 2z2n_A 94 LPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SG 171 (299)
T ss_dssp CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TC
T ss_pred CCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CC
Confidence 1111223667778888877 54556789999998 542222223334567899999999988887777889999998 66
Q ss_pred eEEEE-Ee-CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCceee--eeCCCCCEEEEEEeCC--EEEEEcCCCeEEE
Q 021744 183 QCAGV-IN-LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDLS--LSGPVGQVYAMAVGND--LLFAGTQDGAILA 253 (308)
Q Consensus 183 ~~~~~-~~-~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~~--~~~~~~~v~~~~~~~~--~l~~g~~dg~i~i 253 (308)
+.... .. ....+..+ .+++++.++.. ++.|.+||. +++... ...+...+.+++++++ ++++...++.|..
T Consensus 172 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 250 (299)
T 2z2n_A 172 DITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGR 250 (299)
T ss_dssp CEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEE
T ss_pred cEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEE
Confidence 55432 11 22233444 35677766665 789999999 666543 3334567899999988 5555557789999
Q ss_pred EEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEeeceEEE
Q 021744 254 WKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSVSFIMF 296 (308)
Q Consensus 254 wd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~s~~i~ 296 (308)
||.. +. .....+..+...+.. ++ +++.+.++.....++
T Consensus 251 ~d~~-g~---~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~ 289 (299)
T 2z2n_A 251 LTSN-NI---IEEYPIQIKSAEPHGICF-DGETIWFAMECDKIG 289 (299)
T ss_dssp EETT-TE---EEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEE
T ss_pred ECCC-Cc---eEEEeCCCCCCccceEEe-cCCCEEEEecCCcEE
Confidence 9983 31 111122344456777 88 888877765433333
No 187
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.49 E-value=3.6e-11 Score=98.08 Aligned_cols=222 Identities=9% Similarity=-0.005 Sum_probs=144.0
Q ss_pred eeEEecCCCe-e-eccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEee-
Q 021744 71 AKRFANNTWG-R-NNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLE- 147 (308)
Q Consensus 71 ~i~~s~~g~~-~-s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~- 147 (308)
.++++++|.. + +...++.|.+||..+....... ......+..+.+.+++....+..++.|.+||.... .. ..+.
T Consensus 28 ~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~-~~-~~~~~ 104 (270)
T 1rwi_B 28 GVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLP-FNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSN-NQ-TVLPF 104 (270)
T ss_dssp EEEECTTCCEEEEECSSSCEEEEECC-----EECC-CCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCS-CC-EECCC
T ss_pred ceEECCCCCEEEEccCCCCcEEEecCCCcccceEe-eCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCc-eE-eeeec
Confidence 7899999998 7 6578899999997654322111 11123466788888887744444889999998766 22 2222
Q ss_pred CcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe-CCCeeE--EEEcCCCEEEEEc-CCcEEEEEcCCCcee
Q 021744 148 GHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN-LGGEVG--CMISEGPWIFIGV-TNFVKAWNTQTNTDL 223 (308)
Q Consensus 148 ~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-~~~~v~--~~~~~~~~l~~~~-d~~i~~wd~~~~~~~ 223 (308)
.....+..++++++++++++...++.|.+|+..+........ ...... ++.++++++++.. ++.|.+||..+....
T Consensus 105 ~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~ 184 (270)
T 1rwi_B 105 DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV 184 (270)
T ss_dssp CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEE
T ss_pred CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceE
Confidence 233578999999999888887788999999876554332211 111222 2346788666665 789999999877655
Q ss_pred ee-eCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee-ceEEEEe
Q 021744 224 SL-SGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV-SFIMFIG 298 (308)
Q Consensus 224 ~~-~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~~ 298 (308)
.. ..+...+..++++++ ++++...++.|.+|+.... ........+...+.. +++++|.++++.. +..|.+.
T Consensus 185 ~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~----~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~ 260 (270)
T 1rwi_B 185 VLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST----TSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKL 260 (270)
T ss_dssp ECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS----CCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEE
T ss_pred eecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC----cceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEE
Confidence 32 233367899999998 5666667889999998764 221212223345666 9999998666543 5555554
Q ss_pred e
Q 021744 299 Q 299 (308)
Q Consensus 299 ~ 299 (308)
.
T Consensus 261 ~ 261 (270)
T 1rwi_B 261 T 261 (270)
T ss_dssp C
T ss_pred c
Confidence 4
No 188
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.48 E-value=1.6e-11 Score=100.21 Aligned_cols=220 Identities=10% Similarity=-0.021 Sum_probs=143.4
Q ss_pred CCceE-EecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc-eeEEecCCCe-eeccCCCcEEEEECCCCCCccc
Q 021744 26 GGLST-ADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA-AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNI 102 (308)
Q Consensus 26 ~~~~~-s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~-~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~ 102 (308)
+.+++ +.+.++.|.+|+...... ...+..+.... .+++.++|.. ++.. ++.|.+||.+.......
T Consensus 35 g~l~v~~~~~~~~i~~~~~~~~~~-----------~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~ 102 (270)
T 1rwi_B 35 GNVYVTSEGMYGRVVKLATGSTGT-----------TVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVL 102 (270)
T ss_dssp CCEEEEECSSSCEEEEECC----------------EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEEC
T ss_pred CCEEEEccCCCCcEEEecCCCccc-----------ceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeee
Confidence 45666 557889999998765411 00001111122 6899999988 6666 88999999865433211
Q ss_pred ccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCC
Q 021744 103 NNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCAS 181 (308)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~ 181 (308)
. ......+..+.+.+++.. ++...++.|.+|+..+. ............+..++++++++++++...++.|.+||...
T Consensus 103 ~-~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~-~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 103 P-FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSK-TQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp C-CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCC-SCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred e-cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCc-eeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence 1 111133667788888877 55556789999976655 22222223334678999999998777777788999999887
Q ss_pred CeEEEEEe-CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCceeeee-CCCCCEEEEEEeCC--EEEEEcCCCeEEEE
Q 021744 182 GQCAGVIN-LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDLSLS-GPVGQVYAMAVGND--LLFAGTQDGAILAW 254 (308)
Q Consensus 182 ~~~~~~~~-~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~~~~-~~~~~v~~~~~~~~--~l~~g~~dg~i~iw 254 (308)
........ .......+ .+++.++++.. ++.|.+||..+....... .+...+.+++++++ ++++...++.|+++
T Consensus 181 ~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~ 260 (270)
T 1rwi_B 181 NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKL 260 (270)
T ss_dssp CCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEE
T ss_pred CceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEE
Confidence 65443222 21333444 35676666665 779999998776544322 23357899999998 77788889999999
Q ss_pred EcCCC
Q 021744 255 KFNVT 259 (308)
Q Consensus 255 d~~~~ 259 (308)
++...
T Consensus 261 ~~~~~ 265 (270)
T 1rwi_B 261 TSLEH 265 (270)
T ss_dssp CCCGG
T ss_pred cCCCc
Confidence 98875
No 189
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.48 E-value=5.7e-11 Score=99.07 Aligned_cols=222 Identities=10% Similarity=0.043 Sum_probs=144.7
Q ss_pred eeEEecCCCe-ee-------ccCCCcEEEEECCCCCCccccc---ceeeeeeeeeeeecC-CceEEeeCCCeEEEEEcCC
Q 021744 71 AKRFANNTWG-RN-------NNFNNHSNNYRAGNSKNSNINN---RAVIKTDILCRNWVQ-GNCMYGEKCKFLHSWTVGD 138 (308)
Q Consensus 71 ~i~~s~~g~~-~s-------~~~d~~i~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~g~~d~~i~iwd~~~ 138 (308)
.++|.++|.. ++ +..++.|.+||..+++...... ..+...+..+.+.++ +....+...+.|.+||..
T Consensus 22 ~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~- 100 (314)
T 1pjx_A 22 GPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTD- 100 (314)
T ss_dssp EEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETT-
T ss_pred CceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEeCC-
Confidence 6899999988 77 6788999999987665421111 013344777888888 776555555588999988
Q ss_pred CceeeeE-ee---C-cccceEEEEEeCCCCEEEEeeCC---------------CcEEEEeCCCCeEEEEEeC-CCe-eEE
Q 021744 139 GFKLLTQ-LE---G-HQKVVSGITLPSGSDKLYSGSKD---------------ETVRVWDCASGQCAGVINL-GGE-VGC 196 (308)
Q Consensus 139 ~~~~~~~-~~---~-h~~~v~~~~~~~~~~~l~s~s~d---------------g~v~~wd~~~~~~~~~~~~-~~~-v~~ 196 (308)
+ +.... .. + ....+.+++++++++++++...+ +.|..||.. ++....... ..+ -.+
T Consensus 101 g-~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~ 178 (314)
T 1pjx_A 101 G-TFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIA 178 (314)
T ss_dssp S-CEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEE
T ss_pred C-CEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcceEE
Confidence 6 33322 11 1 12457899999999888777655 567788776 554433332 112 223
Q ss_pred EE----cCCCEEEEE-c-CCcEEEEEcC-CCcee------eeeCCC-CCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCC
Q 021744 197 MI----SEGPWIFIG-V-TNFVKAWNTQ-TNTDL------SLSGPV-GQVYAMAVGND--LLFAGTQDGAILAWKFNVTT 260 (308)
Q Consensus 197 ~~----~~~~~l~~~-~-d~~i~~wd~~-~~~~~------~~~~~~-~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~ 260 (308)
+. ++++.++++ . ++.|.+||+. +++.. .+..+. ..+..++++++ ++++...++.|.+||..++
T Consensus 179 ~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g- 257 (314)
T 1pjx_A 179 VRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGG- 257 (314)
T ss_dssp EEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCB-
T ss_pred EecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCC-
Confidence 45 677665544 4 7899999986 44321 233333 56889999998 5566567889999998865
Q ss_pred cccccceeccccCCCeEE-EEecCCCeEEEee--ceEEEEee
Q 021744 261 NCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV--SFIMFIGQ 299 (308)
Q Consensus 261 ~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~--s~~i~~~~ 299 (308)
+.+..+..+...+.. +|+++++.|.++. +..|+...
T Consensus 258 ---~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~ 296 (314)
T 1pjx_A 258 ---QPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFE 296 (314)
T ss_dssp ---SCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ---cEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEe
Confidence 445555555566777 9999998665444 23555543
No 190
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.47 E-value=2.7e-11 Score=103.61 Aligned_cols=208 Identities=8% Similarity=0.019 Sum_probs=128.1
Q ss_pred cCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCceEE-ee----------CCCeEEEEEcCCCceeeeEeeCc---
Q 021744 84 NFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNCMY-GE----------KCKFLHSWTVGDGFKLLTQLEGH--- 149 (308)
Q Consensus 84 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~----------~d~~i~iwd~~~~~~~~~~~~~h--- 149 (308)
..|++|.+||..+++.... ..... .. .+.++|++..++ +. .++.|.+||+.+. +.+.++...
T Consensus 28 ~~d~~v~v~D~~t~~~~~~-i~~g~-~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~-~~~~~i~~~~~~ 103 (361)
T 2oiz_A 28 LTESRVHVYDYTNGKFLGM-VPTAF-NG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL-TFEKEISLPPKR 103 (361)
T ss_dssp GGGCEEEEEETTTCCEEEE-EECCE-EE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC-CEEEEEEECTTB
T ss_pred cccCeEEEEECCCCeEEEE-ecCCC-CC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC-cEEEEEEcCccc
Confidence 3578999999988865432 11222 23 789999997733 32 3678999999988 666666532
Q ss_pred ---ccceEEEEEeCCCCEEEEeeC--CCcEEEEeCCCCeEEEE-EeCCCeeE-EEEcCC-CEEE-EEcCC----------
Q 021744 150 ---QKVVSGITLPSGSDKLYSGSK--DETVRVWDCASGQCAGV-INLGGEVG-CMISEG-PWIF-IGVTN---------- 210 (308)
Q Consensus 150 ---~~~v~~~~~~~~~~~l~s~s~--dg~v~~wd~~~~~~~~~-~~~~~~v~-~~~~~~-~~l~-~~~d~---------- 210 (308)
......++++|++++|+++.. +++|.+||+.+++.+.. +....... .+.+++ ..++ .+.|+
T Consensus 104 ~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~ 183 (361)
T 2oiz_A 104 VQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGED 183 (361)
T ss_dssp CCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTT
T ss_pred cccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCC
Confidence 245678999999999988864 58999999999988887 54332211 112221 1111 11233
Q ss_pred --------------------------------------cEEEEEcCCCcee---eeeC------C----CCCEEEEEEeC
Q 021744 211 --------------------------------------FVKAWNTQTNTDL---SLSG------P----VGQVYAMAVGN 239 (308)
Q Consensus 211 --------------------------------------~i~~wd~~~~~~~---~~~~------~----~~~v~~~~~~~ 239 (308)
.+.++|+...... .+.. + ......++++|
T Consensus 184 g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~ 263 (361)
T 2oiz_A 184 GKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHR 263 (361)
T ss_dssp SSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEET
T ss_pred CcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEec
Confidence 3444444332211 0000 0 00011267888
Q ss_pred C--EEEEEcC-----------CCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee--ceEEEEeecC
Q 021744 240 D--LLFAGTQ-----------DGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV--SFIMFIGQNN 301 (308)
Q Consensus 240 ~--~l~~g~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~--s~~i~~~~~~ 301 (308)
+ .++++.. .+.|.+||+.+. +.+.++..+. ... +|+|||++|+++. ++.+|-..+.
T Consensus 264 dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~----~~v~~i~~~~--p~~ia~spdg~~l~v~n~~~v~v~D~~t~ 335 (361)
T 2oiz_A 264 ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK----QRVARIPGRD--ALSMTIDQQRNLMLTLDGGNVNVYDISQP 335 (361)
T ss_dssp TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT----EEEEEEECTT--CCEEEEETTTTEEEEECSSCEEEEECSSS
T ss_pred CCCeEEEEEccCCCcccccCCCceEEEEECCCC----cEEEEEecCC--eeEEEECCCCCEEEEeCCCeEEEEECCCC
Confidence 7 4443322 348999999987 7788888776 555 9999999998765 4444433333
No 191
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.47 E-value=2.4e-11 Score=113.67 Aligned_cols=224 Identities=9% Similarity=-0.022 Sum_probs=144.7
Q ss_pred eeEEecCCCe-eeccCC-----CcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCCC--------------
Q 021744 71 AKRFANNTWG-RNNNFN-----NHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKCK-------------- 129 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~-------------- 129 (308)
.++|||||+. |.++.+ .+|++||+++++.... .........+.|+|+ .. +++..++
T Consensus 167 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~--~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~ 243 (741)
T 1yr2_A 167 AWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD--ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQ 243 (741)
T ss_dssp EEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE--EEEEEESCCCEESTT-SEEEEEECCCC--------CCCCC
T ss_pred eEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc--cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCC
Confidence 7899999998 544432 4699999998866421 111122356789999 55 5555443
Q ss_pred eEEEEEcCCCce---eeeEeeCcccceEEEEEeCCCCEEEEeeCCC-----cEEEEeCCCC--eEEEEEe-CC-CeeEEE
Q 021744 130 FLHSWTVGDGFK---LLTQLEGHQKVVSGITLPSGSDKLYSGSKDE-----TVRVWDCASG--QCAGVIN-LG-GEVGCM 197 (308)
Q Consensus 130 ~i~iwd~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg-----~v~~wd~~~~--~~~~~~~-~~-~~v~~~ 197 (308)
.|++|++.++.. .+.....+...+..+.|+||+++|+..+.++ .|++||+.++ +....+. .. .....+
T Consensus 244 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~ 323 (741)
T 1yr2_A 244 TVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV 323 (741)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE
T ss_pred EEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE
Confidence 489999987631 2222223334688999999999988777544 8999999877 4133443 22 333344
Q ss_pred EcCCCEEEEEc-----CCcEEEEEcCCC--ceee-eeCCCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCCCccccccee
Q 021744 198 ISEGPWIFIGV-----TNFVKAWNTQTN--TDLS-LSGPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAAS 268 (308)
Q Consensus 198 ~~~~~~l~~~~-----d~~i~~wd~~~~--~~~~-~~~~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~ 268 (308)
+++++.|+..+ +..|.+||+.++ +... +..+...+..++++.+ ++++...|+..+||.+.... +....
T Consensus 324 ~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g---~~~~~ 400 (741)
T 1yr2_A 324 DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDG---KPAGA 400 (741)
T ss_dssp EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTS---CEEEE
T ss_pred eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCC---Cceee
Confidence 67888777543 346999999874 3443 3444556777888866 88888899988887665211 33444
Q ss_pred ccc-cCCCeEE-EEecCCCeEEEee-----ceEEEEeec
Q 021744 269 LKV-HTDSNRA-HFSRDVTSLLGSV-----SFIMFIGQN 300 (308)
Q Consensus 269 ~~~-~~~~v~~-~~s~d~~~l~~s~-----s~~i~~~~~ 300 (308)
+.. +...+.. .++|+++.++.+. ...+|.+..
T Consensus 401 l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 439 (741)
T 1yr2_A 401 VSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDP 439 (741)
T ss_dssp CBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEET
T ss_pred ccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 543 3456666 8999988666322 356776653
No 192
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.45 E-value=2.8e-11 Score=102.03 Aligned_cols=223 Identities=9% Similarity=-0.028 Sum_probs=145.0
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeC
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEG 148 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~ 148 (308)
++.|+|++.. +..+.+++++.|.- +... ....+...+..+.+.+++.+ +++..++.|.+||..++ +.......
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~-~~~~~~~~ 84 (333)
T 2dg1_A 10 TLFYSGKSNSAVPIISESELQTITA---EPWL-EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETK-EIKRPFVS 84 (333)
T ss_dssp BCCSCGGGGCSSCCCCGGGSCEEEC---EEEE-EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTC-CEEEEEEC
T ss_pred eeeecCCccceeEEeecccCccccc---ceeE-EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCC-cEEEEeeC
Confidence 5788888877 77788899999932 1111 11122223566788888877 56778899999999887 44443335
Q ss_pred cccceEEEEEeCCCCEEEEeeCC----CcEEEEeCCCCeEEEEEe---CCCeeEEE--EcCCCEEEEEcC-------CcE
Q 021744 149 HQKVVSGITLPSGSDKLYSGSKD----ETVRVWDCASGQCAGVIN---LGGEVGCM--ISEGPWIFIGVT-------NFV 212 (308)
Q Consensus 149 h~~~v~~~~~~~~~~~l~s~s~d----g~v~~wd~~~~~~~~~~~---~~~~v~~~--~~~~~~l~~~~d-------~~i 212 (308)
+...+.+++++++++++++...+ +.|.+||.++++....+. ....+..+ .++++++++... +.|
T Consensus 85 ~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l 164 (333)
T 2dg1_A 85 HKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGV 164 (333)
T ss_dssp SSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEE
T ss_pred CCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceE
Confidence 66789999999999888877766 689999998876654443 22334443 467887776552 456
Q ss_pred EEEEcCCCceeeeeCCCCCEEEEEEeCC--EE-EEEcCCCeEEEEEcCCCCcccccc-----eeccccCCCeEE-EEecC
Q 021744 213 KAWNTQTNTDLSLSGPVGQVYAMAVGND--LL-FAGTQDGAILAWKFNVTTNCFEPA-----ASLKVHTDSNRA-HFSRD 283 (308)
Q Consensus 213 ~~wd~~~~~~~~~~~~~~~v~~~~~~~~--~l-~~g~~dg~i~iwd~~~~~~~~~~~-----~~~~~~~~~v~~-~~s~d 283 (308)
..+|..+++...+......+..++|+|+ .+ ++.+.++.|.+||+.+.......+ ..+..+ ..+.. +++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~ 243 (333)
T 2dg1_A 165 YYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSD 243 (333)
T ss_dssp EEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTT
T ss_pred EEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCC
Confidence 6777666655544333446789999998 44 555668899999996421100110 112222 34555 89999
Q ss_pred CCeEEEee-ceEEEEee
Q 021744 284 VTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 284 ~~~l~~s~-s~~i~~~~ 299 (308)
|.++++.. ...|+.+.
T Consensus 244 G~l~v~~~~~~~v~~~d 260 (333)
T 2dg1_A 244 DNLYVAMYGQGRVLVFN 260 (333)
T ss_dssp CCEEEEEETTTEEEEEC
T ss_pred CCEEEEEcCCCEEEEEC
Confidence 98777654 34555554
No 193
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.44 E-value=5.6e-11 Score=98.54 Aligned_cols=212 Identities=11% Similarity=0.073 Sum_probs=139.7
Q ss_pred CceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCcccccc-c-eeEEecCCCe-eeccCCCcEEEEECCCCCCcccc
Q 021744 27 GLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGA-A-AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNIN 103 (308)
Q Consensus 27 ~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~-~-~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~ 103 (308)
.+++++..++.|..|+...+ . ..+ ..+.. . .++++|+|.+ ++...++.|.+||..+++.....
T Consensus 41 ~l~~~~~~~~~i~~~~~~~~-~--~~~-----------~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 41 AVIFSDVRQNRTWAWSDDGQ-L--SPE-----------MHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIA 106 (296)
T ss_dssp EEEEEEGGGTEEEEEETTSC-E--EEE-----------ESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEE
T ss_pred EEEEEeCCCCEEEEEECCCC-e--EEE-----------ECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEe
Confidence 47889999999999998764 1 000 01111 2 7899999999 77777789999999776532111
Q ss_pred c---ceeeeeeeeeeeecCCce-EE----ee-------------CCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCC
Q 021744 104 N---RAVIKTDILCRNWVQGNC-MY----GE-------------KCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGS 162 (308)
Q Consensus 104 ~---~~~~~~~~~~~~~~~~~~-~~----g~-------------~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~ 162 (308)
. ......+..+.+.++|.+ ++ |. ..+.|..++.. + + +..+..+......++|+|++
T Consensus 107 ~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g-~-~~~~~~~~~~~~gi~~s~dg 183 (296)
T 3e5z_A 107 DSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G-T-LSAPIRDRVKPNGLAFLPSG 183 (296)
T ss_dssp CEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S-C-EEEEECCCSSEEEEEECTTS
T ss_pred eccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-C-C-EEEeecCCCCCccEEECCCC
Confidence 1 011122566888899987 43 33 13466666655 3 2 34455566778999999999
Q ss_pred CEEEEeeCCCcEEEEeCC-CCeE---EEEEe-CCCee--EEEEcCCCEEEEEcCCcEEEEEcCCCceeeeeCCCCCEEEE
Q 021744 163 DKLYSGSKDETVRVWDCA-SGQC---AGVIN-LGGEV--GCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAM 235 (308)
Q Consensus 163 ~~l~s~s~dg~v~~wd~~-~~~~---~~~~~-~~~~v--~~~~~~~~~l~~~~d~~i~~wd~~~~~~~~~~~~~~~v~~~ 235 (308)
+.+++.+.++.|.+|++. +++. ...+. ..... .++.++++++++. ++.|.+||........+..+.. +.++
T Consensus 184 ~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~g~~~~~~~~~~~-~~~~ 261 (296)
T 3e5z_A 184 NLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPDGDELGRVLTPQT-TSNL 261 (296)
T ss_dssp CEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTTSCEEEEEECSSC-CCEE
T ss_pred CEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCCCCEEEEEECCCC-ceeE
Confidence 988888888999999987 4554 23332 11122 2345788877766 8899999987433336666666 8999
Q ss_pred EEe-CC--EEEEEcCCCeEEEEEcCC
Q 021744 236 AVG-ND--LLFAGTQDGAILAWKFNV 258 (308)
Q Consensus 236 ~~~-~~--~l~~g~~dg~i~iwd~~~ 258 (308)
+|. |+ .|++++.+ .+.-++..+
T Consensus 262 ~f~~~d~~~L~v~t~~-~l~~~~~~~ 286 (296)
T 3e5z_A 262 CFGGPEGRTLYMTVST-EFWSIETNV 286 (296)
T ss_dssp EEESTTSCEEEEEETT-EEEEEECSC
T ss_pred EEECCCCCEEEEEcCC-eEEEEEccc
Confidence 994 67 67777665 444555555
No 194
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.43 E-value=1.1e-11 Score=115.15 Aligned_cols=221 Identities=9% Similarity=-0.046 Sum_probs=134.9
Q ss_pred CCceE-----EecCCCeEEEeecCCCCCCCCCcccccCCC-CCCccccccceeEEecCCCe-eeccCCCc----------
Q 021744 26 GGLST-----ADTRQKVCNYWRAGKCNRFPCPYLHRELPL-PPAATANGAAAKRFANNTWG-RNNNFNNH---------- 88 (308)
Q Consensus 26 ~~~~~-----s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~-~~~~~gh~~~~i~~s~~g~~-~s~~~d~~---------- 88 (308)
|.+|| +|+.+.+|++||+.++. .. .....+.....++|+|||+. +.++.|..
T Consensus 132 G~~la~~~~~~G~~~~~i~v~dl~tg~-----------~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~ 200 (695)
T 2bkl_A 132 GKKVAFAQKPNAADEAVLHVIDVDSGE-----------WSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPG 200 (695)
T ss_dssp SSEEEEEEEETTCSCCEEEEEETTTCC-----------BCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGG
T ss_pred CCEEEEEECCCCCceEEEEEEECCCCC-----------CcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCC
Confidence 55666 45556899999998872 11 11111111125899999998 88888776
Q ss_pred ---EEEEECCCCCCccc---ccceeeeeeeeeeeecCCce-EEeeCCC----eEEEEEcCCCceeeeEeeCcccceEEEE
Q 021744 89 ---SNNYRAGNSKNSNI---NNRAVIKTDILCRNWVQGNC-MYGEKCK----FLHSWTVGDGFKLLTQLEGHQKVVSGIT 157 (308)
Q Consensus 89 ---i~vwd~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~g~~d~----~i~iwd~~~~~~~~~~~~~h~~~v~~~~ 157 (308)
|++|++.+++.... ....+...+..+.++++|.. +..+.++ .|++|+..++ + ...+..+...+....
T Consensus 201 ~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~-~-~~~l~~~~~~~~~~~ 278 (695)
T 2bkl_A 201 YTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK-D-FRLLVKGVGAKYEVH 278 (695)
T ss_dssp GCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS-S-CEEEEECSSCCEEEE
T ss_pred CCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC-c-eEEeecCCCceEEEE
Confidence 99999987753211 11122234667889999966 4444444 6777766554 2 445555666666666
Q ss_pred EeCCCCEEEEee---CCCcEEEEeCCCCeE---EEEEeC--CCeeEEE-EcCCCEEEEEc-CCcEEEE--EcCCCceeee
Q 021744 158 LPSGSDKLYSGS---KDETVRVWDCASGQC---AGVINL--GGEVGCM-ISEGPWIFIGV-TNFVKAW--NTQTNTDLSL 225 (308)
Q Consensus 158 ~~~~~~~l~s~s---~dg~v~~wd~~~~~~---~~~~~~--~~~v~~~-~~~~~~l~~~~-d~~i~~w--d~~~~~~~~~ 225 (308)
+ +++.++++.. .++.|.+||+.+++. ...+.+ ...+..+ +.++.++++.. ++..++| ++.......+
T Consensus 279 ~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 279 A-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRTV 357 (695)
T ss_dssp E-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTCCEEEEC
T ss_pred e-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCeeEEe
Confidence 6 4555444444 257899999987753 333433 3345544 34555666555 7766666 4433333345
Q ss_pred eCC-CCCEEEEEEeCC--EEE-E---EcCCCeEEEEEcCCCC
Q 021744 226 SGP-VGQVYAMAVGND--LLF-A---GTQDGAILAWKFNVTT 260 (308)
Q Consensus 226 ~~~-~~~v~~~~~~~~--~l~-~---g~~dg~i~iwd~~~~~ 260 (308)
..+ ...+..++++|+ .++ + ....+.|++||+.+++
T Consensus 358 ~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 358 QLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp CCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred cCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 444 566778888887 333 2 2345789999998764
No 195
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.42 E-value=3.5e-11 Score=112.06 Aligned_cols=223 Identities=10% Similarity=0.018 Sum_probs=141.1
Q ss_pred CCceEEecCCC-----eEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCe-eeccCCCc-----------
Q 021744 26 GGLSTADTRQK-----VCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWG-RNNNFNNH----------- 88 (308)
Q Consensus 26 ~~~~~s~s~d~-----~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~-~s~~~d~~----------- 88 (308)
|.+||.++.++ +|++||+.++. .............++|+|||+. +.++.++.
T Consensus 136 g~~la~~~~~~G~~~~~i~v~d~~tg~-----------~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~ 204 (710)
T 2xdw_A 136 GEYFAYGLSASGSDWVTIKFMKVDGAK-----------ELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST 204 (710)
T ss_dssp SSEEEEEEEETTCSCEEEEEEETTTTE-----------EEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred CCEEEEEEcCCCCceEEEEEEECCCCC-----------CCcccccCcccceEEEEeCCCEEEEEEECCcccccccccccc
Confidence 55666554432 89999998871 1111111111115899999998 77777665
Q ss_pred -----EEEEECCCCCCccccc---ceeeeeeeeeeeecCCce-EEeeC-----CCeEEEEEcCC------CceeeeEeeC
Q 021744 89 -----SNNYRAGNSKNSNINN---RAVIKTDILCRNWVQGNC-MYGEK-----CKFLHSWTVGD------GFKLLTQLEG 148 (308)
Q Consensus 89 -----i~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~g~~-----d~~i~iwd~~~------~~~~~~~~~~ 148 (308)
|++|++.+++...... ..+......+.++|+|.. +..+. +..|++||+.+ +......+..
T Consensus 205 ~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~ 284 (710)
T 2xdw_A 205 NLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID 284 (710)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC
T ss_pred CCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeC
Confidence 9999998765321111 112223567889999976 33332 67899999986 4224566777
Q ss_pred cccceEEEEEeCCCCEEEEeeCC----CcEEEEeCCCCeE---EEEEeCCC--eeEEE-Ec-CCCEEEEEc-CC--cEEE
Q 021744 149 HQKVVSGITLPSGSDKLYSGSKD----ETVRVWDCASGQC---AGVINLGG--EVGCM-IS-EGPWIFIGV-TN--FVKA 214 (308)
Q Consensus 149 h~~~v~~~~~~~~~~~l~s~s~d----g~v~~wd~~~~~~---~~~~~~~~--~v~~~-~~-~~~~l~~~~-d~--~i~~ 214 (308)
+...+.. .|+|++..|+..+.. ..|.+||+.+++. ...+.+.. .+..+ +. ++.++++.. ++ .|.+
T Consensus 285 ~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~ 363 (710)
T 2xdw_A 285 NFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQL 363 (710)
T ss_dssp SSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEE
T ss_pred CCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEE
Confidence 7766655 488888887666553 3699999988642 22333333 45444 34 455555555 66 5778
Q ss_pred EEcCCCcee-eeeCCCCCEEEEEEeCC--EEE-EEc---CCCeEEEEEcCCCC
Q 021744 215 WNTQTNTDL-SLSGPVGQVYAMAVGND--LLF-AGT---QDGAILAWKFNVTT 260 (308)
Q Consensus 215 wd~~~~~~~-~~~~~~~~v~~~~~~~~--~l~-~g~---~dg~i~iwd~~~~~ 260 (308)
||+.+++.. .+..+...+..++++|+ .++ +.+ ..+.|+.||+.+++
T Consensus 364 ~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 364 HDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 888677654 66667778889999987 333 322 35789999998763
No 196
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.40 E-value=1.2e-09 Score=90.23 Aligned_cols=227 Identities=10% Similarity=-0.022 Sum_probs=148.0
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeC
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEG 148 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~ 148 (308)
++++.++|.. ++...++.|.+||.. ++............+..+.+.+++.. ++...++.|..|+.... .....+..
T Consensus 19 ~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~~~~~~~~ 96 (299)
T 2z2n_A 19 GITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGI-IKEYTLPN 96 (299)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSC-EEEEECSS
T ss_pred ceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCc-EEEEeCCC
Confidence 6899999999 776668899999987 43321111112234677788888877 44445788999998632 21222223
Q ss_pred cccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe--CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCcee
Q 021744 149 HQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN--LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDL 223 (308)
Q Consensus 149 h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~--~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~ 223 (308)
....+..+++++++.++++...++.|..||. +++...... ....+..+ .++++++++.. ++.|..||. +++..
T Consensus 97 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 174 (299)
T 2z2n_A 97 PDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDIT 174 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred cCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE
Confidence 4567899999999988888777889999998 555443222 22334444 35677777665 679999999 66655
Q ss_pred e--eeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEe-eceEEEE
Q 021744 224 S--LSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGS-VSFIMFI 297 (308)
Q Consensus 224 ~--~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s-~s~~i~~ 297 (308)
. .......+..++++++ ++++...++.|.+||. ++.. .. ..+..+...+.. +++++|.++++. ....|+.
T Consensus 175 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~--~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 250 (299)
T 2z2n_A 175 EFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEI--TE-FKIPTPNARPHAITAGAGIDLWFTEWGANKIGR 250 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE--EE-EECSSTTCCEEEEEECSTTCEEEEETTTTEEEE
T ss_pred EeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcE--EE-EECCCCCCCceeEEECCCCCEEEeccCCceEEE
Confidence 3 3334557889999988 5566666889999998 5421 11 122334456667 899999876665 3455555
Q ss_pred eecCceeE
Q 021744 298 GQNNKGVV 305 (308)
Q Consensus 298 ~~~~~~~~ 305 (308)
...+..+.
T Consensus 251 ~d~~g~~~ 258 (299)
T 2z2n_A 251 LTSNNIIE 258 (299)
T ss_dssp EETTTEEE
T ss_pred ECCCCceE
Confidence 55444443
No 197
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.39 E-value=1.8e-09 Score=89.15 Aligned_cols=251 Identities=11% Similarity=0.055 Sum_probs=156.4
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc-eeEEecCCCe-eeccCCCcEEEEECCCCCCcccc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA-AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNIN 103 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~-~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~ 103 (308)
+.+.++...++.|.+|+.. +. +.. .+.+. +.... .+++.++|.. ++...++.|..+|.+ ++.....
T Consensus 31 g~l~v~~~~~~~v~~~~~~-~~-----~~~--~~~~~---~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~ 98 (300)
T 2qc5_A 31 GKVWFTQHKANKISSLDQS-GR-----IKE--FEVPT---PDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYP 98 (300)
T ss_dssp SCEEEEETTTTEEEEECTT-SC-----EEE--EECSS---TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEE
T ss_pred CCEEEEcCCCCeEEEECCC-Cc-----eEE--EECCC---CCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEec
Confidence 5567777778899999877 41 110 01110 11122 7889999988 777778889999986 4332111
Q ss_pred cceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCC
Q 021744 104 NRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG 182 (308)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~ 182 (308)
.......+..+.+.+++.. ++...++.|..++.. +......+......+..+++++++++.++...++.|..+|. ++
T Consensus 99 ~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g 176 (300)
T 2qc5_A 99 LPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TG 176 (300)
T ss_dssp CSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC
T ss_pred CCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CC
Confidence 1111233667777788877 444457899999987 52222223334567899999999987777766889999998 55
Q ss_pred eEEEEEeC---CCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCceee--eeCCCCCEEEEEEeCC--EEEEEcCCCeEE
Q 021744 183 QCAGVINL---GGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDLS--LSGPVGQVYAMAVGND--LLFAGTQDGAIL 252 (308)
Q Consensus 183 ~~~~~~~~---~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~~--~~~~~~~v~~~~~~~~--~l~~g~~dg~i~ 252 (308)
+... +.. ......+ .+++++.++.. .+.|.+||. +++... +......+.+++++++ ++++...++.|.
T Consensus 177 ~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 254 (300)
T 2qc5_A 177 KLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIG 254 (300)
T ss_dssp CEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEE
T ss_pred cEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEE
Confidence 5443 331 2234444 35677766665 668999998 555443 3334567899999988 555555678999
Q ss_pred EEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEeeceEEEE
Q 021744 253 AWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSVSFIMFI 297 (308)
Q Consensus 253 iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~s~~i~~ 297 (308)
.||.. +. .....+......+.. ++.++|.+.++... .|+.
T Consensus 255 ~~~~~-g~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-~i~~ 295 (300)
T 2qc5_A 255 RITND-NT---IQEYQLQTENAEPHGITFGKDGSVWFALKC-KIGK 295 (300)
T ss_dssp EECTT-SC---EEEEECCSTTCCCCCEEECTTSCEEEECSS-EEEE
T ss_pred EECCC-Cc---EEEEECCccCCccceeEeCCCCCEEEEccC-ceEE
Confidence 99984 31 111222223344555 88889886665543 4443
No 198
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.33 E-value=6.7e-10 Score=93.95 Aligned_cols=192 Identities=11% Similarity=0.016 Sum_probs=118.9
Q ss_pred CCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCC---C--eEEEEEcCCCceeeeEeeCcccceEEEEE
Q 021744 85 FNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKC---K--FLHSWTVGDGFKLLTQLEGHQKVVSGITL 158 (308)
Q Consensus 85 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d---~--~i~iwd~~~~~~~~~~~~~h~~~v~~~~~ 158 (308)
.+..|.+||+++++... . ..+....|+|+|.. ++.+.+ + .|.+|++.++ +...... +.. +..++|
T Consensus 41 ~~~~l~~~d~~~~~~~~--l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g-~~~~l~~-~~~-~~~~~w 111 (347)
T 2gop_A 41 YENTIVIENLKNNARRF--I----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETL-SSKKILE-AKN-IRSLEW 111 (347)
T ss_dssp EEEEEEEEETTTCCEEE--E----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTT-EEEEEEE-ESE-EEEEEE
T ss_pred ccceEEEEeCCCCceEE--c----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCC-ceEEEEc-CCC-ccceeE
Confidence 36779999998765321 1 45677899999975 444432 3 4888888877 4444333 334 999999
Q ss_pred eCCCCEEEEeeCC---------------------------CcEEEEeCCCCeEEEEEeCCCeeE--EEEcCCCEEEEEc-
Q 021744 159 PSGSDKLYSGSKD---------------------------ETVRVWDCASGQCAGVINLGGEVG--CMISEGPWIFIGV- 208 (308)
Q Consensus 159 ~~~~~~l~s~s~d---------------------------g~v~~wd~~~~~~~~~~~~~~~v~--~~~~~~~~l~~~~- 208 (308)
+|+++.|+.++.+ ..|.+||+.+++.+..+..+ .+. .+++++ +++++.
T Consensus 112 spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg-~~~~~~~ 189 (347)
T 2gop_A 112 NEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDK-IVVNVPH 189 (347)
T ss_dssp CTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTE-EEEEEEC
T ss_pred CCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCe-EEEEEec
Confidence 9999988887642 57999999988874444322 222 346788 666653
Q ss_pred C------C-cEEEEEcCCCceeeeeCCCCCEEEEEEeCC--EEEEEcCC--------CeEEEEEcCCCCcccccceeccc
Q 021744 209 T------N-FVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LLFAGTQD--------GAILAWKFNVTTNCFEPAASLKV 271 (308)
Q Consensus 209 d------~-~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~--~l~~g~~d--------g~i~iwd~~~~~~~~~~~~~~~~ 271 (308)
+ . ...+|.+.+++...+..+ ..+..+ +|+ .|+..+.+ ..|.+|| ++ +.......
T Consensus 190 ~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~----~~~~l~~~ 260 (347)
T 2gop_A 190 REIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GK----EVMGILDE 260 (347)
T ss_dssp CCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SS----CEEESSTT
T ss_pred ccccccccccccEEEeCCCceEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CC----ceEecccc
Confidence 2 2 334443336665555444 555554 888 56555533 4677787 33 33333345
Q ss_pred cCCCeE-E-EEecCCCeEEEee---ceEEEEee
Q 021744 272 HTDSNR-A-HFSRDVTSLLGSV---SFIMFIGQ 299 (308)
Q Consensus 272 ~~~~v~-~-~~s~d~~~l~~s~---s~~i~~~~ 299 (308)
+...+. . .|+ |+ +++++. ...|| ..
T Consensus 261 ~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 261 VDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp CCSEEEEEEEET-TE-EEEEEEETTEEEEE-EE
T ss_pred CCcccCCccEEc-Cc-EEEEEecCCcEEEE-Ec
Confidence 556666 3 888 88 555443 45666 54
No 199
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.32 E-value=1.3e-10 Score=99.38 Aligned_cols=171 Identities=9% Similarity=-0.062 Sum_probs=120.1
Q ss_pred eeeeeeeecCCce-EEeeCCCeEEEEEcCCCc----------eeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEe
Q 021744 110 TDILCRNWVQGNC-MYGEKCKFLHSWTVGDGF----------KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWD 178 (308)
Q Consensus 110 ~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~----------~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd 178 (308)
.+..+++++.... ++|+.+ .+++|++.+.. +..... .+.. |+.++| ++++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 4677888888766 555555 56669875431 111222 3566 999999 88899888 889999999
Q ss_pred CCCCeEEEEEe-CCCeeEEEEcC-CCEEEEEcCCcEEEEEcCCCceeeeeCCCCCEEEEEEeCCEEEEEcCCCeEEEEEc
Q 021744 179 CASGQCAGVIN-LGGEVGCMISE-GPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKF 256 (308)
Q Consensus 179 ~~~~~~~~~~~-~~~~v~~~~~~-~~~l~~~~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~ 256 (308)
+.+........ +...+..+.+- ..++++..||.|.+||+++++... +...|++++|+|+-++.|..||.+++|+.
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG~~vg~~dg~i~~~~~ 189 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQLAVLLKDRSFQSFAW 189 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSEEEEEETTSCEEEEEE
T ss_pred chhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCceEEEEcCCcEEEEcC
Confidence 98765544443 55556655322 234445569999999999887654 34589999999996677889999999988
Q ss_pred CCCCcccccceec------c---ccCCCeEE-EEecCCCeEEEee
Q 021744 257 NVTTNCFEPAASL------K---VHTDSNRA-HFSRDVTSLLGSV 291 (308)
Q Consensus 257 ~~~~~~~~~~~~~------~---~~~~~v~~-~~s~d~~~l~~s~ 291 (308)
..... ....++ . +|...|.+ .|.+++.++++-.
T Consensus 190 ~~~~~--~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 190 RNGEM--EKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp ETTEE--EEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred CCccc--cccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 87521 003333 2 36778888 9999999988643
No 200
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.31 E-value=3.9e-09 Score=95.17 Aligned_cols=180 Identities=6% Similarity=-0.049 Sum_probs=128.8
Q ss_pred cCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcC--CCceeeeEeeCccc
Q 021744 76 NNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVG--DGFKLLTQLEGHQK 151 (308)
Q Consensus 76 ~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~--~~~~~~~~~~~h~~ 151 (308)
|.+.. ++...+++|.++|..+++.+.... ....+..+.++|++.. ++++.|+.|.+||+. +. +.+.++....
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~--~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~-~~v~~i~~G~- 240 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLD--TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP-TTVAEIKIGS- 240 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEE--CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC-CEEEEEECCS-
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEe--CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCC-cEeEEEecCC-
Confidence 43444 888889999999998886653221 2223557889999977 667789999999995 66 6677776533
Q ss_pred ceEEEEEe----CCCCEEEEeeC-CCcEEEEeCCCCeEEEEEeCCC------------eeEEE--EcCCCEEEEE-c-CC
Q 021744 152 VVSGITLP----SGSDKLYSGSK-DETVRVWDCASGQCAGVINLGG------------EVGCM--ISEGPWIFIG-V-TN 210 (308)
Q Consensus 152 ~v~~~~~~----~~~~~l~s~s~-dg~v~~wd~~~~~~~~~~~~~~------------~v~~~--~~~~~~l~~~-~-d~ 210 (308)
....++|+ |++++++++.+ +++|.++|..+.+.+..+.... .+..+ ++++..+++. . +|
T Consensus 241 ~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g 320 (567)
T 1qks_A 241 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG 320 (567)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCC
Confidence 45799999 69998876655 5899999999999998876321 23333 3444554433 3 78
Q ss_pred cEEEEEcCCCcee--eeeCCCCCEEEEEEeCC--E-EEEEcCCCeEEEEEcCCC
Q 021744 211 FVKAWNTQTNTDL--SLSGPVGQVYAMAVGND--L-LFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 211 ~i~~wd~~~~~~~--~~~~~~~~v~~~~~~~~--~-l~~g~~dg~i~iwd~~~~ 259 (308)
.|.++|....+.. ...........+.|+|+ + +++...++.|.++|+.++
T Consensus 321 ~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~ 374 (567)
T 1qks_A 321 KILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG 374 (567)
T ss_dssp EEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred eEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCC
Confidence 9999998876433 22233456778999998 4 455557889999999987
No 201
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.30 E-value=4.7e-09 Score=87.03 Aligned_cols=211 Identities=6% Similarity=-0.038 Sum_probs=136.7
Q ss_pred eeEEecCCC-e-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeC
Q 021744 71 AKRFANNTW-G-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEG 148 (308)
Q Consensus 71 ~i~~s~~g~-~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~ 148 (308)
...|+|++. . ++...++.|..||..+++.. .......+..+.+.+++.++.+. +..|.+||..++ +.......
T Consensus 17 gp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~---~~~~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g-~~~~~~~~ 91 (297)
T 3g4e_A 17 SPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ---RVTMDAPVSSVALRQSGGYVATI-GTKFCALNWKEQ-SAVVLATV 91 (297)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTCCEE---EEECSSCEEEEEEBTTSSEEEEE-TTEEEEEETTTT-EEEEEEEC
T ss_pred CCeEECCCCEEEEEECCCCEEEEEECCCCcEE---EEeCCCceEEEEECCCCCEEEEE-CCeEEEEECCCC-cEEEEEec
Confidence 578888655 4 78788899999999766432 11223347778889999875555 578999999877 33222211
Q ss_pred ----cccceEEEEEeCCCCEEEEeeCC---------CcEEEEeCCC-CeEEEEEeCCCee--EEEEcCCCEEEEE-c-CC
Q 021744 149 ----HQKVVSGITLPSGSDKLYSGSKD---------ETVRVWDCAS-GQCAGVINLGGEV--GCMISEGPWIFIG-V-TN 210 (308)
Q Consensus 149 ----h~~~v~~~~~~~~~~~l~s~s~d---------g~v~~wd~~~-~~~~~~~~~~~~v--~~~~~~~~~l~~~-~-d~ 210 (308)
....+..++++|+++++++.... ..-.+|.+.. ++........... .++.++++.|++. . ++
T Consensus 92 ~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~ 171 (297)
T 3g4e_A 92 DNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSY 171 (297)
T ss_dssp CTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGT
T ss_pred CCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCC
Confidence 12457889999999976654322 2334554432 3333322221222 2345788877644 4 78
Q ss_pred cEEEEEc--CCCcee------eeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-E
Q 021744 211 FVKAWNT--QTNTDL------SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-H 279 (308)
Q Consensus 211 ~i~~wd~--~~~~~~------~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~ 279 (308)
.|.+||+ .++... .+..+...+..+++.++ +.++....+.|..||..++ +.+..+..+...+++ +
T Consensus 172 ~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG----~~~~~i~~p~~~~t~~~ 247 (297)
T 3g4e_A 172 SVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG----KRLQTVKLPVDKTTSCC 247 (297)
T ss_dssp EEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC----CEEEEEECSSSBEEEEE
T ss_pred cEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc----eEEEEEECCCCCceEEE
Confidence 9999997 455432 22233456889999988 5555566788999999876 666777766666777 9
Q ss_pred Ee-cCCCeEEEe
Q 021744 280 FS-RDVTSLLGS 290 (308)
Q Consensus 280 ~s-~d~~~l~~s 290 (308)
|. ||++.|.++
T Consensus 248 f~g~d~~~L~vt 259 (297)
T 3g4e_A 248 FGGKNYSEMYVT 259 (297)
T ss_dssp EESGGGCEEEEE
T ss_pred EeCCCCCEEEEE
Confidence 98 888777633
No 202
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.30 E-value=1.1e-09 Score=94.03 Aligned_cols=228 Identities=12% Similarity=0.045 Sum_probs=137.5
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCeeeccCCCcEEEEECCCCCCcccccc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWGRNNNFNNHSNNYRAGNSKNSNINNR 105 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~~s~~~d~~i~vwd~~~~~~~~~~~~ 105 (308)
+..+..++.++.|..+|..+++. +.. .+..... .....+ .++..+.++.++.|..+|..+++..-....
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~-----~W~-~~~~~~~----~~~p~~-~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~ 171 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTV-----AWQ-TKVAGEA----LSRPVV-SDGLVLIHTSNGQLQALNEADGAVKWTVNL 171 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCE-----EEE-EECSSCC----CSCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCEEEEEECCCCCE-----EEE-EeCCCce----EcCCEE-ECCEEEEEcCCCeEEEEECCCCcEEEEEeC
Confidence 45677788899999999887721 100 0111000 001122 233337778899999999988865422111
Q ss_pred eeeee---eeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCcccc----------e-EEEEEeCCCCEEEEeeCC
Q 021744 106 AVIKT---DILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKV----------V-SGITLPSGSDKLYSGSKD 171 (308)
Q Consensus 106 ~~~~~---~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~----------v-~~~~~~~~~~~l~s~s~d 171 (308)
..... ........++..+.+..++.+..+|..++ +.+......... + ....+ .+..++.++.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG-~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~~ 248 (376)
T 3q7m_A 172 DMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQG-QMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFALAYN 248 (376)
T ss_dssp CC-----CCCCCCEEETTEEEECCTTTEEEEEETTTC-CEEEEEECCC-----------CCCCCCEE--ETTEEEEECTT
T ss_pred CCCceeecCCCCcEEECCEEEEEcCCCEEEEEECCCC-cEEEEEecccCCCCcccccccccCCCcEE--ECCEEEEEecC
Confidence 10000 00111122456677888999999999998 565555422110 1 11111 24678888889
Q ss_pred CcEEEEeCCCCeEEEEEeCCCeeEEEEcCCCEEEEEcCCcEEEEEcCCCcee-eee-CCCCCEEEEEEeCCEEEEEcCCC
Q 021744 172 ETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDL-SLS-GPVGQVYAMAVGNDLLFAGTQDG 249 (308)
Q Consensus 172 g~v~~wd~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~d~~i~~wd~~~~~~~-~~~-~~~~~v~~~~~~~~~l~~g~~dg 249 (308)
+.+..+|.++++.+..............++.+++...++.+..+|.++++.. ... .....+.+.....+.|+.++.+|
T Consensus 249 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~l~v~~~~g 328 (376)
T 3q7m_A 249 GNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEG 328 (376)
T ss_dssp SCEEEEETTTCCEEEEECCCCEEEEEEETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEETTEEEEECTTS
T ss_pred cEEEEEECCCCcEEeeccCCCCCCceEECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEECCEEEEEeCCC
Confidence 9999999999998887765443332233444444555889999999999887 333 12223334445555888889999
Q ss_pred eEEEEEcCCCCcccccceeccc
Q 021744 250 AILAWKFNVTTNCFEPAASLKV 271 (308)
Q Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~ 271 (308)
.|.++|..++ +.+.....
T Consensus 329 ~l~~~d~~tG----~~~~~~~~ 346 (376)
T 3q7m_A 329 YLHWINVEDG----RFVAQQKV 346 (376)
T ss_dssp EEEEEETTTC----CEEEEEEC
T ss_pred eEEEEECCCC----cEEEEEec
Confidence 9999999987 44444443
No 203
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.30 E-value=1.1e-08 Score=87.59 Aligned_cols=240 Identities=10% Similarity=-0.014 Sum_probs=145.2
Q ss_pred eEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCe-eecc----------CCCcEEEEECCCCCCcccccc
Q 021744 37 VCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWG-RNNN----------FNNHSNNYRAGNSKNSNINNR 105 (308)
Q Consensus 37 ~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~-~s~~----------~d~~i~vwd~~~~~~~~~~~~ 105 (308)
+|.++|..++. .+ ...+. |... .++++|||+. +.+. .+++|.+||..+.+.......
T Consensus 48 ~v~v~D~~t~~-----~~-~~i~~-----g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~ 115 (373)
T 2mad_H 48 QQWVLDAGSGS-----IL-GHVNG-----GFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIEL 115 (373)
T ss_pred EEEEEECCCCe-----EE-EEecC-----CCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEEC
Confidence 88999988761 11 11221 2222 5899999998 4443 367899999987654432111
Q ss_pred e------eeeeeeeeeeecCCce-EEee-C-CCeEEEEEcCCCceeeeE-eeCcccceEEEEEeCCC-CEEEEeeCCCcE
Q 021744 106 A------VIKTDILCRNWVQGNC-MYGE-K-CKFLHSWTVGDGFKLLTQ-LEGHQKVVSGITLPSGS-DKLYSGSKDETV 174 (308)
Q Consensus 106 ~------~~~~~~~~~~~~~~~~-~~g~-~-d~~i~iwd~~~~~~~~~~-~~~h~~~v~~~~~~~~~-~~l~s~s~dg~v 174 (308)
. .......+.++|+|.. +.+. . ++.|.++| .++ +.+.. +.. .. ++.+.|++ ..+++.+.||.+
T Consensus 116 ~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~-~~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~ 189 (373)
T 2mad_H 116 PDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGG-SSDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGL 189 (373)
T ss_pred CCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCC-CEEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCE
Confidence 1 0122456789999977 3343 2 57899999 888 66666 542 22 24455554 456777889999
Q ss_pred EEEeCCCCeEEEEEe------CCCeeE---EEEcC-CCEEEEEcCCcEEEEEcCCCcee---eeeC----------CCCC
Q 021744 175 RVWDCASGQCAGVIN------LGGEVG---CMISE-GPWIFIGVTNFVKAWNTQTNTDL---SLSG----------PVGQ 231 (308)
Q Consensus 175 ~~wd~~~~~~~~~~~------~~~~v~---~~~~~-~~~l~~~~d~~i~~wd~~~~~~~---~~~~----------~~~~ 231 (308)
.++|. +++.+.... ...++. .+.++ ++++++...+.+.+.|+.+.... .+.. ....
T Consensus 190 ~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g 268 (373)
T 2mad_H 190 AKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGG 268 (373)
T ss_pred EEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCc
Confidence 99999 877664332 111111 12333 44455556789999999765322 1110 1123
Q ss_pred EEEEEEeCC--EEEEEcC----------CCeEEEEEcCCCCcccccceeccccCCCeEEEEecCCC-eEEEee--ceEEE
Q 021744 232 VYAMAVGND--LLFAGTQ----------DGAILAWKFNVTTNCFEPAASLKVHTDSNRAHFSRDVT-SLLGSV--SFIMF 296 (308)
Q Consensus 232 v~~~~~~~~--~l~~g~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~s~d~~-~l~~s~--s~~i~ 296 (308)
...+.++|+ .+..... .+.|.++|+.+. +.+.++.....+...+|+|||+ .++++. +..|.
T Consensus 269 ~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~----~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ 344 (373)
T 2mad_H 269 WQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG----QTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLH 344 (373)
T ss_pred eEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC----EEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEE
Confidence 445788888 4444322 357999999986 6677775443343349999999 566543 45555
Q ss_pred Eee
Q 021744 297 IGQ 299 (308)
Q Consensus 297 ~~~ 299 (308)
+..
T Consensus 345 ViD 347 (373)
T 2mad_H 345 IYD 347 (373)
T ss_pred EEE
Confidence 544
No 204
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.29 E-value=1.4e-08 Score=83.67 Aligned_cols=226 Identities=10% Similarity=-0.006 Sum_probs=145.0
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeC
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEG 148 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~ 148 (308)
.+++.++|.. ++...++.|.+||.. ++............+..+.+.+++.. ++...++.|..+|.. +......+..
T Consensus 24 ~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~ 101 (300)
T 2qc5_A 24 GITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQ 101 (300)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSS
T ss_pred eeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCC
Confidence 7899999999 777778999999987 43321111111133667777788877 444457889999988 5222222232
Q ss_pred cccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEE-Ee-CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCcee
Q 021744 149 HQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGV-IN-LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDL 223 (308)
Q Consensus 149 h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~-~~-~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~ 223 (308)
....+..+++++++.++++...++.|..+|.. ++.... +. .......+ .+++++.++.. ++.|..+|. +++..
T Consensus 102 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~ 179 (300)
T 2qc5_A 102 PDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLE 179 (300)
T ss_dssp TTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred CCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEE
Confidence 34678999999999888887778899999987 554422 22 12334444 36677666665 678999998 55544
Q ss_pred ee--eCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee-ceEEEE
Q 021744 224 SL--SGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV-SFIMFI 297 (308)
Q Consensus 224 ~~--~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~-s~~i~~ 297 (308)
.+ ..+...+..+++.++ ++++....+.|.+||. ++. .....+..+...+.. ++.++|.+.++.. ...|+.
T Consensus 180 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~---~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~ 255 (300)
T 2qc5_A 180 EYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGE---ISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGR 255 (300)
T ss_dssp EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC---EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEE
T ss_pred EeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCc---EEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEE
Confidence 33 234457899999988 5555556778999998 331 111122233445666 8999988666553 345555
Q ss_pred eecCcee
Q 021744 298 GQNNKGV 304 (308)
Q Consensus 298 ~~~~~~~ 304 (308)
...+..+
T Consensus 256 ~~~~g~~ 262 (300)
T 2qc5_A 256 ITNDNTI 262 (300)
T ss_dssp ECTTSCE
T ss_pred ECCCCcE
Confidence 4433333
No 205
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.29 E-value=7.4e-10 Score=94.34 Aligned_cols=261 Identities=7% Similarity=-0.017 Sum_probs=160.7
Q ss_pred CCCCCceEEecC----CCeEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCe-eecc----------CCC
Q 021744 23 GGGGGLSTADTR----QKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWG-RNNN----------FNN 87 (308)
Q Consensus 23 ~~~~~~~~s~s~----d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~-~s~~----------~d~ 87 (308)
.++..++++... ++.|.+.|..+. ........|... .++++|||+. +.+. .++
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~-----------~v~~~I~vG~~P-~va~spDG~~lyVan~~~~r~~~G~~~~ 109 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAG-----------RVIGMIDGGFLP-NPVVADDGSFIAHASTVFSRIARGERTD 109 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTT-----------EEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEE
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCC-----------eEEEEEECCCCC-cEEECCCCCEEEEEcccccccccCCCCC
Confidence 455666666654 789999998876 111111112222 3899999998 4443 367
Q ss_pred cEEEEECCCCCCccccccee------eeeeeeeeeecCCce-EEee--CCCeEEEEEcCCCceeeeEeeCcccceEEEEE
Q 021744 88 HSNNYRAGNSKNSNINNRAV------IKTDILCRNWVQGNC-MYGE--KCKFLHSWTVGDGFKLLTQLEGHQKVVSGITL 158 (308)
Q Consensus 88 ~i~vwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-~~g~--~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~ 158 (308)
+|.+||..+.+......... ......+.++|+|.. +.+. .++.|.++|+.+. +.+.++.-. + . ...+
T Consensus 110 ~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~-~vv~tI~v~-g-~-~~~~ 185 (386)
T 3sjl_D 110 YVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK-AFKRMLDVP-D-C-YHIF 185 (386)
T ss_dssp EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTT-EEEEEEECC-S-E-EEEE
T ss_pred EEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCC-cEEEEEECC-C-c-ceee
Confidence 89999998887553322111 123667899999976 3333 3689999999999 777777532 1 1 2233
Q ss_pred eCCCCEEEEeeCCCcEEEEeCCC-CeEEEEEe-C----CCeeE---EEE-cCCCEEEEEcCCcEEEEEcCCCcee---ee
Q 021744 159 PSGSDKLYSGSKDETVRVWDCAS-GQCAGVIN-L----GGEVG---CMI-SEGPWIFIGVTNFVKAWNTQTNTDL---SL 225 (308)
Q Consensus 159 ~~~~~~l~s~s~dg~v~~wd~~~-~~~~~~~~-~----~~~v~---~~~-~~~~~l~~~~d~~i~~wd~~~~~~~---~~ 225 (308)
....+.+++.+.||++.+.++.+ ++...... . ..++. .+. +++++++++.+++|++.|+.+.... .+
T Consensus 186 P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~ 265 (386)
T 3sjl_D 186 PTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAV 265 (386)
T ss_dssp EEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCE
T ss_pred cCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecce
Confidence 33456778888999999999986 55433221 1 11111 222 5777777888999999999876432 22
Q ss_pred e--C--------CCCCEEEEEEeCC--EEEEEcC----------CCeEEEEEcCCCCcccccceeccccCCCeEE-EEec
Q 021744 226 S--G--------PVGQVYAMAVGND--LLFAGTQ----------DGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSR 282 (308)
Q Consensus 226 ~--~--------~~~~v~~~~~~~~--~l~~g~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~ 282 (308)
. . .......++++++ .++.... .+.|.++|+.+. +.+..+.... .+.. +|++
T Consensus 266 ~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~----kv~~~i~vg~-~~~~lavs~ 340 (386)
T 3sjl_D 266 EALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG----ERLAKFEMGH-EIDSINVSQ 340 (386)
T ss_dssp ESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTC----CEEEEEEEEE-EECEEEECS
T ss_pred eccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCC----eEEEEEECCC-CcceEEECC
Confidence 1 0 1122334777887 3333321 257999999997 6667666433 4545 9999
Q ss_pred CCC-eEEEee--c--eEEEEeecCcee
Q 021744 283 DVT-SLLGSV--S--FIMFIGQNNKGV 304 (308)
Q Consensus 283 d~~-~l~~s~--s--~~i~~~~~~~~~ 304 (308)
|++ +|+++. + +.++-....+.+
T Consensus 341 D~~~~ly~tn~~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 341 DEKPLLYALSTGDKTLYIHDAESGEEL 367 (386)
T ss_dssp SSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred CCCeEEEEEcCCCCeEEEEECCCCcEE
Confidence 997 666644 3 444444444433
No 206
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.27 E-value=6.4e-09 Score=89.12 Aligned_cols=224 Identities=9% Similarity=0.020 Sum_probs=136.7
Q ss_pred CCceEEecCCCeEEEeecCCCCC-CCCCcccccCCCCCCccc--cccceeEEecCCCe-eeccCCCcEEEEECCCCCCcc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNR-FPCPYLHRELPLPPAATA--NGAAAKRFANNTWG-RNNNFNNHSNNYRAGNSKNSN 101 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~-~~~~~~~~~~~~~~~~~g--h~~~~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~ 101 (308)
+..+..++.++.|..+|..+++. +..+. +....... ..........++.. +.++.++.|..+|.++++..-
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W 127 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSL-----AEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAW 127 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEEC-----CC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecC-----ccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEE
Confidence 56677788899999999987731 11110 00000000 00111122234445 778889999999998886542
Q ss_pred cccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCcccce-----EEEEEeCCCCEEEEeeCCCcEEE
Q 021744 102 INNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVV-----SGITLPSGSDKLYSGSKDETVRV 176 (308)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v-----~~~~~~~~~~~l~s~s~dg~v~~ 176 (308)
... ....+.......++..+.++.++.|..+|..++ +.+..+....... ...... +..++.++.++.+..
T Consensus 128 ~~~--~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG-~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~ 202 (376)
T 3q7m_A 128 QTK--VAGEALSRPVVSDGLVLIHTSNGQLQALNEADG-AVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSA 202 (376)
T ss_dssp EEE--CSSCCCSCCEEETTEEEEECTTSEEEEEETTTC-CEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEE
T ss_pred EEe--CCCceEcCCEEECCEEEEEcCCCeEEEEECCCC-cEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEE
Confidence 111 111111111223556677888999999999999 6666655332211 122222 457888888999999
Q ss_pred EeCCCCeEEEEEeCCCee------------EEEEcCCCEEEEE-cCCcEEEEEcCCCceeeeeCCCCCEEEEEEeCCEEE
Q 021744 177 WDCASGQCAGVINLGGEV------------GCMISEGPWIFIG-VTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGNDLLF 243 (308)
Q Consensus 177 wd~~~~~~~~~~~~~~~v------------~~~~~~~~~l~~~-~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~~l~ 243 (308)
+|.++++.+.......+. ......+..++++ .++.+..+|.++++...... ......+....+.++
T Consensus 203 ~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~-~~~~~~~~~~~~~l~ 281 (376)
T 3q7m_A 203 VLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRE-LGSVNDFIVDGNRIY 281 (376)
T ss_dssp EETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEEC-CCCEEEEEEETTEEE
T ss_pred EECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeecc-CCCCCCceEECCEEE
Confidence 999999998887743221 0011124455544 48999999999998873222 233556666666777
Q ss_pred EEcCCCeEEEEEcCCCC
Q 021744 244 AGTQDGAILAWKFNVTT 260 (308)
Q Consensus 244 ~g~~dg~i~iwd~~~~~ 260 (308)
.++.++.|..+|..+++
T Consensus 282 ~~~~~g~l~~~d~~tG~ 298 (376)
T 3q7m_A 282 LVDQNDRVMALTIDGGV 298 (376)
T ss_dssp EEETTCCEEEEETTTCC
T ss_pred EEcCCCeEEEEECCCCc
Confidence 78889999999998874
No 207
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.26 E-value=1.2e-08 Score=85.69 Aligned_cols=207 Identities=11% Similarity=0.056 Sum_probs=132.8
Q ss_pred eeEEecCCCe--eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeC
Q 021744 71 AKRFANNTWG--RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEG 148 (308)
Q Consensus 71 ~i~~s~~g~~--~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~ 148 (308)
..+|+|++.. ++...++.|..||.++++... ......+..+.+.+++..+.+..+ .|.+||..++ +.. .+..
T Consensus 53 gp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~---~~~~~~v~~i~~~~dg~l~v~~~~-gl~~~d~~~g-~~~-~~~~ 126 (326)
T 2ghs_A 53 GPTFDPASGTAWWFNILERELHELHLASGRKTV---HALPFMGSALAKISDSKQLIASDD-GLFLRDTATG-VLT-LHAE 126 (326)
T ss_dssp EEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE---EECSSCEEEEEEEETTEEEEEETT-EEEEEETTTC-CEE-EEEC
T ss_pred CCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE---EECCCcceEEEEeCCCeEEEEECC-CEEEEECCCC-cEE-EEee
Confidence 5789997554 777778999999997664321 112234777788899988666654 4999999877 332 2221
Q ss_pred c-----ccceEEEEEeCCCCEEEEeeC------CCcEEEEeCCCCeEEEEEeCCCeeE--EEEcCCCEEEEE-c-CCcEE
Q 021744 149 H-----QKVVSGITLPSGSDKLYSGSK------DETVRVWDCASGQCAGVINLGGEVG--CMISEGPWIFIG-V-TNFVK 213 (308)
Q Consensus 149 h-----~~~v~~~~~~~~~~~l~s~s~------dg~v~~wd~~~~~~~~~~~~~~~v~--~~~~~~~~l~~~-~-d~~i~ 213 (308)
. ...+..++++|+++++++... .+.|..++ +++............ ++.++++.++.+ . ++.|.
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~ 204 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLM 204 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEE
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEE
Confidence 1 246889999999987765542 24566666 455433322211222 345788876644 4 67999
Q ss_pred EEEcC--CC-ce-----e-eeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEe
Q 021744 214 AWNTQ--TN-TD-----L-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFS 281 (308)
Q Consensus 214 ~wd~~--~~-~~-----~-~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s 281 (308)
+||+. ++ +. . .+......+..+++.++ ++++...++.|..||.. + +.+..+..+...+.+ +|+
T Consensus 205 ~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g----~~~~~i~~~~~~~~~~af~ 279 (326)
T 2ghs_A 205 RVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-G----NHIARYEVPGKQTTCPAFI 279 (326)
T ss_dssp EEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT-C----CEEEEEECSCSBEEEEEEE
T ss_pred EEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC-C----CEEEEEECCCCCcEEEEEe
Confidence 99986 55 32 1 22223456788999888 44555456889999984 3 445566656666777 998
Q ss_pred -cCCCeEEEe
Q 021744 282 -RDVTSLLGS 290 (308)
Q Consensus 282 -~d~~~l~~s 290 (308)
++++.|+++
T Consensus 280 g~d~~~L~vt 289 (326)
T 2ghs_A 280 GPDASRLLVT 289 (326)
T ss_dssp STTSCEEEEE
T ss_pred cCCCCEEEEE
Confidence 888766543
No 208
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.24 E-value=6.2e-12 Score=107.84 Aligned_cols=192 Identities=10% Similarity=-0.029 Sum_probs=99.2
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCe-eeccCCCcEEEEECCCCCCcccc
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNIN 103 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~ 103 (308)
.+..+++++.|+.|+.||..+++. +.. ..... . .+..+.+++.. ++++.|+.|+.||.++++.....
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~-----~W~-~~~~~-~-----~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~ 75 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSI-----KWT-LKEDP-V-----LQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKL 75 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCE-----EEE-EECCC-S-----CCCC-----CCEEECTTTCCEEEC-----CCSEEC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCE-----EEE-ecCCC-c-----eecceEcCCCEEEEeCCCCEEEEEECCCCceeeee
Confidence 367788999999999999988721 111 00000 0 02234456666 77889999999999888654222
Q ss_pred cceeeeeeee-eeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCC
Q 021744 104 NRAVIKTDIL-CRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG 182 (308)
Q Consensus 104 ~~~~~~~~~~-~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~ 182 (308)
.......+.. ..+..++..++++.++.|+.||..++ +.+..+..+. ...++|++..+++++.|+.|+.||.+++
T Consensus 76 ~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG-~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG 150 (369)
T 2hz6_A 76 PFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTG-EKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTR 150 (369)
T ss_dssp SCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSS
T ss_pred eccCccccccCceEecCCEEEEEeCCCEEEEEECCCC-cEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCC
Confidence 1111111111 11123445577888999999999999 6666666543 2345567888999999999999999999
Q ss_pred eEEEEEeCCCeeE-EEEcC----CCEEEEEcCCcEEEEEcCCCceeeeeCCCCCEE
Q 021744 183 QCAGVINLGGEVG-CMISE----GPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVY 233 (308)
Q Consensus 183 ~~~~~~~~~~~v~-~~~~~----~~~l~~~~d~~i~~wd~~~~~~~~~~~~~~~v~ 233 (308)
+.+..+....... .+..+ +.+++.+.++.+..||.++++.+.......++.
T Consensus 151 ~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~ 206 (369)
T 2hz6_A 151 ELRWNATYFDYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVV 206 (369)
T ss_dssp SCCCEEEEEEECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEE
T ss_pred CEEEeEecccccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceE
Confidence 8877765221111 11111 445555559999999999998873222344443
No 209
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.23 E-value=3.2e-09 Score=98.55 Aligned_cols=219 Identities=9% Similarity=-0.029 Sum_probs=133.9
Q ss_pred eeEEecCCCe-e-----eccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCCC-------------e
Q 021744 71 AKRFANNTWG-R-----NNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKCK-------------F 130 (308)
Q Consensus 71 ~i~~s~~g~~-~-----s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~-------------~ 130 (308)
.++|||||++ | .|+...+|++||+++++.... .........+.|+ ++.. +++..+. .
T Consensus 133 ~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~--~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~ 209 (693)
T 3iuj_A 133 QLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET--PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHK 209 (693)
T ss_dssp EEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE--EEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCE
T ss_pred EEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc--ccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcE
Confidence 6799999998 5 344446899999998875422 1111113567788 8854 5665553 4
Q ss_pred EEEEEcCCCce---eeeEeeC-cccceEEEEEeCCCCEEEEee----CCCcEEEEeCCCCe-EEEEEe-CCCee-EEEEc
Q 021744 131 LHSWTVGDGFK---LLTQLEG-HQKVVSGITLPSGSDKLYSGS----KDETVRVWDCASGQ-CAGVIN-LGGEV-GCMIS 199 (308)
Q Consensus 131 i~iwd~~~~~~---~~~~~~~-h~~~v~~~~~~~~~~~l~s~s----~dg~v~~wd~~~~~-~~~~~~-~~~~v-~~~~~ 199 (308)
|++|++.+... .+..... |...+..+.|+||+++|+... ....|+++|+.++. ....+. ..... ..+.+
T Consensus 210 v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~ 289 (693)
T 3iuj_A 210 VYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSLVDN 289 (693)
T ss_dssp EEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEEEEE
T ss_pred EEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEEEec
Confidence 99999987631 2333333 445678899999999875433 23589999998763 233333 33322 33556
Q ss_pred CCCEEE-EEc-C---CcEEEEEcCCCce---eeeeCCCCCEEEEEEeCC---EEEEEcCCC--eEEEEEcCCCCcccccc
Q 021744 200 EGPWIF-IGV-T---NFVKAWNTQTNTD---LSLSGPVGQVYAMAVGND---LLFAGTQDG--AILAWKFNVTTNCFEPA 266 (308)
Q Consensus 200 ~~~~l~-~~~-d---~~i~~wd~~~~~~---~~~~~~~~~v~~~~~~~~---~l~~g~~dg--~i~iwd~~~~~~~~~~~ 266 (308)
++..|+ .+. + ..|..+|+.+++. ..+..+...+. .|+++ ++++...++ .|++|++..+ ..
T Consensus 290 ~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~-----~~ 362 (693)
T 3iuj_A 290 KGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK-----RV 362 (693)
T ss_dssp ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSC-----EE
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCC-----ee
Confidence 666555 443 2 5799999988765 45555555554 55554 444455555 6888888753 22
Q ss_pred eecc-ccCCCeEE-EEecCCCeEEEee-c----eEEEEee
Q 021744 267 ASLK-VHTDSNRA-HFSRDVTSLLGSV-S----FIMFIGQ 299 (308)
Q Consensus 267 ~~~~-~~~~~v~~-~~s~d~~~l~~s~-s----~~i~~~~ 299 (308)
..+. .....+.. .+++++..++.+. + ..+|...
T Consensus 363 ~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d 402 (693)
T 3iuj_A 363 REVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFE 402 (693)
T ss_dssp EEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEEC
T ss_pred EEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEE
Confidence 3333 23344556 7788887766333 2 5666655
No 210
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.23 E-value=5e-10 Score=95.68 Aligned_cols=163 Identities=7% Similarity=-0.046 Sum_probs=115.3
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCC---------CcccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCc
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSK---------NSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGF 140 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~ 140 (308)
.+++++.... ++|+.++ +++|+++..+ ........+.. +..+.| ++..+..+.++.|++||+.+.
T Consensus 42 lLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~~~~~l~v~dv~sl- 116 (388)
T 1xip_A 42 NLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVSTRNALYSLDLEEL- 116 (388)
T ss_dssp CEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEEESSEEEEEESSST-
T ss_pred EEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEEcCCcEEEEEchhh-
Confidence 6999999999 8888875 7779874332 11001222334 778888 666633338899999999877
Q ss_pred eeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEeCCCeeEEE--EcCCCEEEEEcCCcEEEEEcC
Q 021744 141 KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCM--ISEGPWIFIGVTNFVKAWNTQ 218 (308)
Q Consensus 141 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~d~~i~~wd~~ 218 (308)
........|+..+.++.+.+. .+++++.||.|.+||+.+++... ....++|+ +++| ..+...||++++|+..
T Consensus 117 ~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG-~~vg~~dg~i~~~~~~ 190 (388)
T 1xip_A 117 SEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ-LAVLLKDRSFQSFAWR 190 (388)
T ss_dssp TCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE-EEEEETTSCEEEEEEE
T ss_pred hccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc-eEEEEcCCcEEEEcCC
Confidence 344556667788888877654 39999999999999999887654 23356665 4556 4444459999999998
Q ss_pred CCce--e-ee------e---CCCCCEEEEEEeCC--EEEE
Q 021744 219 TNTD--L-SL------S---GPVGQVYAMAVGND--LLFA 244 (308)
Q Consensus 219 ~~~~--~-~~------~---~~~~~v~~~~~~~~--~l~~ 244 (308)
..+. + ++ . +|...|.++.|.++ ++++
T Consensus 191 ~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 191 NGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp TTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred CccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 8874 3 44 2 36788999999988 4444
No 211
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.22 E-value=3e-12 Score=109.82 Aligned_cols=197 Identities=11% Similarity=0.013 Sum_probs=104.7
Q ss_pred CCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccc-e
Q 021744 77 NTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKV-V 153 (308)
Q Consensus 77 ~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~-v 153 (308)
++.. ++++.|+.|+.||..+++..-.... ..+....+..++.. +.++.|+.|+.||..++ +.+..+..+... +
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~---~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG-~~~w~~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE---DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNN-EGLTKLPFTIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC---CCSCCCC-----CCEEECTTTCCEEEC------CCSEECSCCHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC---CCceecceEcCCCEEEEeCCCCEEEEEECCCC-ceeeeeeccCcccc
Confidence 4556 8899999999999998876532221 23334444555644 66689999999999888 555555433221 1
Q ss_pred E-EEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEeCCCeeEEEEcCCCEEEEEc-CCcEEEEEcCCCcee-eeeCCCC
Q 021744 154 S-GITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGV-TNFVKAWNTQTNTDL-SLSGPVG 230 (308)
Q Consensus 154 ~-~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~~~ 230 (308)
. ...+. .+..+++++.|+.++.||.++|+.+..+..... ...++++..++++. ++.|+.||.++++.. .+..+.
T Consensus 84 ~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~-~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~- 160 (369)
T 2hz6_A 84 QASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA-DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD- 160 (369)
T ss_dssp TTCSCC------CCCCEEEEEEEEECCC-----------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE-
T ss_pred ccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc-ccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc-
Confidence 1 11111 345688889999999999999999888774432 22345666777665 899999999999876 332111
Q ss_pred CEEEEEEeC-----CEEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCC
Q 021744 231 QVYAMAVGN-----DLLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVT 285 (308)
Q Consensus 231 ~v~~~~~~~-----~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~ 285 (308)
....++.+ +.+++++.||.|+.||..++ +.+.........+.. .++++|.
T Consensus 161 -~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG----~~~W~~~~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 161 -YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESG----DVLWIQNYASPVVAFYVWQREGL 216 (369)
T ss_dssp -ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTC----CEEEEEECSSCEEEEEECTTSSC
T ss_pred -ccCccccCCccccceEEEECCCCEEEEEECCCC----cEEEEecCCCceEEEEEecCCce
Confidence 12233444 35677889999999999987 444444432323334 6666664
No 212
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.20 E-value=6.3e-09 Score=86.56 Aligned_cols=221 Identities=9% Similarity=0.089 Sum_probs=136.9
Q ss_pred CCceEE-------ecCCCeEEEeecCCCCCCCCCcccccCCCCCCcccccc-c-eeEEecC-CCe-eeccCCCcEEEEEC
Q 021744 26 GGLSTA-------DTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGA-A-AKRFANN-TWG-RNNNFNNHSNNYRA 94 (308)
Q Consensus 26 ~~~~~s-------~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~-~-~i~~s~~-g~~-~s~~~d~~i~vwd~ 94 (308)
+.++++ ++.++.|.+|+..++... .+. .+ ...++.. . .++++++ |.. ++.. +..|.+||.
T Consensus 29 g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~--~~~---~~---~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~ 99 (314)
T 1pjx_A 29 GDFYIVAPEVEVNGKPAGEILRIDLKTGKKT--VIC---KP---EVNGYGGIPAGCQCDRDANQLFVADM-RLGLLVVQT 99 (314)
T ss_dssp SCEEEEETTCEETTEECCEEEEECTTTCCEE--EEE---CC---EETTEECCEEEEEECSSSSEEEEEET-TTEEEEEET
T ss_pred CCEEEEEeccccCCCCCCEEEEEeCCCCcEE--EEE---ec---ccCCCCCCCceEEEecCCCcEEEEEC-CCCEEEEeC
Confidence 456666 677899999997665210 000 00 0011212 2 7899999 776 5444 447899998
Q ss_pred CCCCCccc-cc---ceeeeeeeeeeeecCCceE-EeeCC---------------CeEEEEEcCCCceeeeEeeCcccceE
Q 021744 95 GNSKNSNI-NN---RAVIKTDILCRNWVQGNCM-YGEKC---------------KFLHSWTVGDGFKLLTQLEGHQKVVS 154 (308)
Q Consensus 95 ~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~-~g~~d---------------~~i~iwd~~~~~~~~~~~~~h~~~v~ 154 (308)
+ ++.... .. ......+..+.+.+++... +...+ +.|..++.. + +.. .+..+.....
T Consensus 100 ~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g-~~~-~~~~~~~~~~ 175 (314)
T 1pjx_A 100 D-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-G-QMI-QVDTAFQFPN 175 (314)
T ss_dssp T-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-S-CEE-EEEEEESSEE
T ss_pred C-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-C-CEE-EeccCCCCcc
Confidence 7 543211 10 1111236778888888774 43333 567777765 4 332 2333445668
Q ss_pred EEEEe----CCCCEE-EEeeCCCcEEEEeCC-CCeEE--EEE---eCC--CeeEEE--EcCCCEEEEEc-CCcEEEEEcC
Q 021744 155 GITLP----SGSDKL-YSGSKDETVRVWDCA-SGQCA--GVI---NLG--GEVGCM--ISEGPWIFIGV-TNFVKAWNTQ 218 (308)
Q Consensus 155 ~~~~~----~~~~~l-~s~s~dg~v~~wd~~-~~~~~--~~~---~~~--~~v~~~--~~~~~~l~~~~-d~~i~~wd~~ 218 (308)
.++++ |+++.+ ++...++.|.+||+. +++.. ..+ ... .....+ .++++++++.. ++.|.+||..
T Consensus 176 ~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~ 255 (314)
T 1pjx_A 176 GIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPD 255 (314)
T ss_dssp EEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred eEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCC
Confidence 89999 998665 454568899999986 45421 112 111 333333 46787777654 7899999998
Q ss_pred CCcee-eeeCCCCCEEEEEEeCC--EE-EEEcCCCeEEEEEcCCC
Q 021744 219 TNTDL-SLSGPVGQVYAMAVGND--LL-FAGTQDGAILAWKFNVT 259 (308)
Q Consensus 219 ~~~~~-~~~~~~~~v~~~~~~~~--~l-~~g~~dg~i~iwd~~~~ 259 (308)
+++.. .+..+...+.+++++|+ .| ++...++.|..|++...
T Consensus 256 ~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 256 GGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp CBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 66654 55556678999999988 34 45556789999998753
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.19 E-value=2.1e-08 Score=87.05 Aligned_cols=209 Identities=7% Similarity=-0.016 Sum_probs=133.8
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCCC--eEEEEEcCCCceeeeEe
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKCK--FLHSWTVGDGFKLLTQL 146 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~--~i~iwd~~~~~~~~~~~ 146 (308)
.++++|++.+ ++...++.|++||.++++..... ....... +.+.+++.. +.+..++ .|.+++..++. ....+
T Consensus 135 ~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~--~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~-~~~~~ 210 (409)
T 3hrp_A 135 GIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVH--PGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGW-APTRI 210 (409)
T ss_dssp EEEECSTTEEEEEETTTTEEEEEETTTTEEEEEE--ETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTT-CEEEE
T ss_pred EEEEeCCCCEEEEecCCCcEEEEECCCCEEEEee--ccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCc-eeEEe
Confidence 7899999998 88888899999999766443211 1112233 788888875 4444444 89999987663 22333
Q ss_pred ----eCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEE---e--C-C-Ce--eEEEEcCCCEEE-EEc-CCc
Q 021744 147 ----EGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVI---N--L-G-GE--VGCMISEGPWIF-IGV-TNF 211 (308)
Q Consensus 147 ----~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~---~--~-~-~~--v~~~~~~~~~l~-~~~-d~~ 211 (308)
......+.+++++|++..|+.+..++.|+.||..++.....- . . . .+ -.++.+++..|+ +.. ++.
T Consensus 211 g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~ 290 (409)
T 3hrp_A 211 GQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSS 290 (409)
T ss_dssp EECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTE
T ss_pred eeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCE
Confidence 214466789999996555666777889999999877633221 1 1 1 11 233456445544 444 779
Q ss_pred EEEEEcCCCceeeeeCCC---------------CCEEEEEEeCC--EEEEEc-CCCeEEEEEcCCCCcccccceecccc-
Q 021744 212 VKAWNTQTNTDLSLSGPV---------------GQVYAMAVGND--LLFAGT-QDGAILAWKFNVTTNCFEPAASLKVH- 272 (308)
Q Consensus 212 i~~wd~~~~~~~~~~~~~---------------~~v~~~~~~~~--~l~~g~-~dg~i~iwd~~~~~~~~~~~~~~~~~- 272 (308)
|+.||.... ...+.++. .....++++|+ ++++-+ .++.|+.|++.++ . +.++.++
T Consensus 291 I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G----~-v~~~~g~~ 364 (409)
T 3hrp_A 291 VYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG----Y-VSTVAGQV 364 (409)
T ss_dssp EEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT----E-EEEEEECT
T ss_pred EEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC----E-EEEEeCCC
Confidence 999987654 33333322 35889999998 667777 7899999997765 2 2333222
Q ss_pred --------------CCCeEE-EEecCCCeEEE
Q 021744 273 --------------TDSNRA-HFSRDVTSLLG 289 (308)
Q Consensus 273 --------------~~~v~~-~~s~d~~~l~~ 289 (308)
-..... +++++|.++++
T Consensus 365 ~~~g~~~g~~~~~~~~~P~giavd~~g~lyVa 396 (409)
T 3hrp_A 365 DVASQIDGTPLEATFNYPYDICYDGEGGYWIA 396 (409)
T ss_dssp TCBSCCCBSTTTCCBSSEEEEEECSSSEEEEE
T ss_pred CCCCcCCCChhceEeCCceEEEEcCCCCEEEE
Confidence 123555 88888765554
No 214
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.19 E-value=8.2e-09 Score=95.51 Aligned_cols=252 Identities=14% Similarity=0.056 Sum_probs=147.8
Q ss_pred CCceEEecCCCeEEEeecCCCCC-CCCCcccccCCCCCCccccccceeEEecCCCeeecc------CCCcEEEEECCCCC
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNR-FPCPYLHRELPLPPAATANGAAAKRFANNTWGRNNN------FNNHSNNYRAGNSK 98 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~-~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~~s~~------~d~~i~vwd~~~~~ 98 (308)
+..++.++.|+.|..+|+.+++. +..... ............ ..+ .++..+.+. .++.|+.||.++++
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~----~~~~~~~~~~~s-P~v-~~g~v~vg~~~~~~~~~g~v~a~D~~tG~ 194 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTR----ADHKRSYTITGA-PRV-VNGKVVIGNGGAEFGVRGYVTAYDAETGK 194 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECC----SCTTSCCBCCSC-CEE-ETTEEEECCBCTTTCCBCEEEEEETTTCC
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCc----CCCCCCccccCC-cEE-ECCEEEEEeCCCccCCCCEEEEEECCCCc
Confidence 56788888999999999988832 111000 000000001111 111 144443222 37899999999887
Q ss_pred Ccccccce-----------------------------eeee-eeeeeeecCCce-EEeeCCC------------------
Q 021744 99 NSNINNRA-----------------------------VIKT-DILCRNWVQGNC-MYGEKCK------------------ 129 (308)
Q Consensus 99 ~~~~~~~~-----------------------------~~~~-~~~~~~~~~~~~-~~g~~d~------------------ 129 (308)
.+-..... .... -....+.++... +.+..++
T Consensus 195 ~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~ 274 (689)
T 1yiq_A 195 EAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFL 274 (689)
T ss_dssp EEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTT
T ss_pred EEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceee
Confidence 54221100 0000 123456665544 5555554
Q ss_pred -eEEEEEcCCCceeeeEeeC--cc-------cceEEEEEeCCCC---EEEEeeCCCcEEEEeCCCCeEEEEEeCCCe---
Q 021744 130 -FLHSWTVGDGFKLLTQLEG--HQ-------KVVSGITLPSGSD---KLYSGSKDETVRVWDCASGQCAGVINLGGE--- 193 (308)
Q Consensus 130 -~i~iwd~~~~~~~~~~~~~--h~-------~~v~~~~~~~~~~---~l~s~s~dg~v~~wd~~~~~~~~~~~~~~~--- 193 (308)
.|..+|..++ +.+..++. |. ..+.......+++ .++.++.+|.++++|.++|+.+........
T Consensus 275 ~~v~AlD~~TG-~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~ 353 (689)
T 1yiq_A 275 SSIVAVNADTG-EYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWT 353 (689)
T ss_dssp TEEEEEETTTC-CEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSE
T ss_pred eeEEEEEccCC-ceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccc
Confidence 4999999999 67766653 21 1222223333554 788999999999999999999865442110
Q ss_pred ---------------------------------------eEEEEcCCCEEEEEc--------------------------
Q 021744 194 ---------------------------------------VGCMISEGPWIFIGV-------------------------- 208 (308)
Q Consensus 194 ---------------------------------------v~~~~~~~~~l~~~~-------------------------- 208 (308)
-.++.++..++++..
T Consensus 354 ~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g 433 (689)
T 1yiq_A 354 KGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLG 433 (689)
T ss_dssp EEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCS
T ss_pred cccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccC
Confidence 012344555655431
Q ss_pred --------------------CCcEEEEEcCCCcee-eeeCCCCCEEEEEEe-CC-EEEEEcCCCeEEEEEcCCCCccccc
Q 021744 209 --------------------TNFVKAWNTQTNTDL-SLSGPVGQVYAMAVG-ND-LLFAGTQDGAILAWKFNVTTNCFEP 265 (308)
Q Consensus 209 --------------------d~~i~~wd~~~~~~~-~~~~~~~~v~~~~~~-~~-~l~~g~~dg~i~iwd~~~~~~~~~~ 265 (308)
++.|..||+.+++.+ .+..+. +...-.+. .. +++.++.||.++.||.+++ +.
T Consensus 434 ~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG----~~ 508 (689)
T 1yiq_A 434 LRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTG----EK 508 (689)
T ss_dssp SEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTC----CE
T ss_pred ccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCC----cc
Confidence 267999999999988 444333 22222232 33 8888999999999999998 66
Q ss_pred ceeccccCCCeEE--EEecCCCeEEE
Q 021744 266 AASLKVHTDSNRA--HFSRDVTSLLG 289 (308)
Q Consensus 266 ~~~~~~~~~~v~~--~~s~d~~~l~~ 289 (308)
+.++......... .|..+|+..++
T Consensus 509 lw~~~~~~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 509 LWEQPAASGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp EEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred ceeeeCCCCcccCceEEEECCEEEEE
Confidence 6666644333322 67888876553
No 215
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.16 E-value=3.1e-09 Score=99.41 Aligned_cols=222 Identities=13% Similarity=0.061 Sum_probs=131.7
Q ss_pred CCceEEecCC-----CeEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCe-eeccCCCc-----------
Q 021744 26 GGLSTADTRQ-----KVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWG-RNNNFNNH----------- 88 (308)
Q Consensus 26 ~~~~~s~s~d-----~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~-~s~~~d~~----------- 88 (308)
|.+||.++.+ .+|++||+.+++ .......+.....++|+|| +. +.++.|+.
T Consensus 174 G~~la~~~~~~G~e~~~i~v~dl~tg~-----------~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~ 241 (741)
T 1yr2_A 174 GRLLAYSVQDGGSDWRTVKFVGVADGK-----------PLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNY 241 (741)
T ss_dssp SSEEEEEEEETTCSEEEEEEEETTTCC-----------EEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCC
T ss_pred CCEEEEEEcCCCCceEEEEEEECCCCC-----------CCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCC
Confidence 5566665443 479999998872 1111000000015799999 77 66665544
Q ss_pred ---EEEEECCCCCCccccc---ceeeeeeeeeeeecCCce-EEeeC-----CCeEEEEEcCCCcee-eeEeeCcccceEE
Q 021744 89 ---SNNYRAGNSKNSNINN---RAVIKTDILCRNWVQGNC-MYGEK-----CKFLHSWTVGDGFKL-LTQLEGHQKVVSG 155 (308)
Q Consensus 89 ---i~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~g~~-----d~~i~iwd~~~~~~~-~~~~~~h~~~v~~ 155 (308)
|++|++.+++...... ..+...+....++++|.. +..+. ...|++||+.++... ...+..+...+..
T Consensus 242 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~ 321 (741)
T 1yr2_A 242 NQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWD 321 (741)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEE
T ss_pred CCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEE
Confidence 8899997765311111 111123567789999965 44443 348999999876223 4556656655555
Q ss_pred EEEeCCCCEEEEeeCC----CcEEEEeCCCC--eEEEEEeC-CCeeEEEE-cCCCEEEEEc-CCcEEEE--EcCCCceee
Q 021744 156 ITLPSGSDKLYSGSKD----ETVRVWDCASG--QCAGVINL-GGEVGCMI-SEGPWIFIGV-TNFVKAW--NTQTNTDLS 224 (308)
Q Consensus 156 ~~~~~~~~~l~s~s~d----g~v~~wd~~~~--~~~~~~~~-~~~v~~~~-~~~~~l~~~~-d~~i~~w--d~~~~~~~~ 224 (308)
.. +|+++.|+..+.+ +.|.+||+.++ +....+.+ ...+..+. .++.++++.. ++..++| |+..+....
T Consensus 322 ~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~ 400 (741)
T 1yr2_A 322 FV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGA 400 (741)
T ss_dssp EE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEE
T ss_pred EE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCceee
Confidence 53 4888888777764 45999999874 33333443 33444443 3444555554 7765555 554443334
Q ss_pred eeC-CCCCEEEEEEeCC---EEEE---EcCCCeEEEEEcCCCC
Q 021744 225 LSG-PVGQVYAMAVGND---LLFA---GTQDGAILAWKFNVTT 260 (308)
Q Consensus 225 ~~~-~~~~v~~~~~~~~---~l~~---g~~dg~i~iwd~~~~~ 260 (308)
+.. ....+..+.++|+ ++++ ....+.|++||+.+++
T Consensus 401 l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 401 VSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp CBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred ccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 443 3567888999887 3332 2345789999998763
No 216
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.14 E-value=3e-08 Score=91.59 Aligned_cols=252 Identities=12% Similarity=0.005 Sum_probs=149.6
Q ss_pred CCceEEecCCCeEEEeecCCCCC-CCCCcccccCCCCCCccccccc-eeEEecCCCeeecc------CCCcEEEEECCCC
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNR-FPCPYLHRELPLPPAATANGAA-AKRFANNTWGRNNN------FNNHSNNYRAGNS 97 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~-~~~~~~~~~~~~~~~~~gh~~~-~i~~s~~g~~~s~~------~d~~i~vwd~~~~ 97 (308)
+..|+.++.|+.|..+|+.+++. +..... . ....+.... ...+ .++..+.++ .++.|+.+|.+++
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~-----~-~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG 200 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTF-----E-GQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETG 200 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETT-----T-TCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCC-----c-CcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCC
Confidence 56788888999999999988832 111100 0 000001101 1112 133333333 2789999999888
Q ss_pred CCccccccee-----------------------------ee--eeeeeeeecCCce-EEeeCCC----------------
Q 021744 98 KNSNINNRAV-----------------------------IK--TDILCRNWVQGNC-MYGEKCK---------------- 129 (308)
Q Consensus 98 ~~~~~~~~~~-----------------------------~~--~~~~~~~~~~~~~-~~g~~d~---------------- 129 (308)
+.+-...... .. ......+.+++.. +.+..++
T Consensus 201 ~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~ 280 (677)
T 1kb0_A 201 ERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNL 280 (677)
T ss_dssp CEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCT
T ss_pred cEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCe
Confidence 7542211100 00 0123455665544 4444332
Q ss_pred ---eEEEEEcCCCceeeeEeeC--cc-------cceEEEEEeCCC---CEEEEeeCCCcEEEEeCCCCeEEEEEeCCC--
Q 021744 130 ---FLHSWTVGDGFKLLTQLEG--HQ-------KVVSGITLPSGS---DKLYSGSKDETVRVWDCASGQCAGVINLGG-- 192 (308)
Q Consensus 130 ---~i~iwd~~~~~~~~~~~~~--h~-------~~v~~~~~~~~~---~~l~s~s~dg~v~~wd~~~~~~~~~~~~~~-- 192 (308)
.|..+|..++ +.+..++. |. .....+....++ ..++.++.+|.++++|.++++.+..+....
T Consensus 281 ~~~sv~AlD~~TG-~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~ 359 (677)
T 1kb0_A 281 YLASIVALDPDTG-KYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVN 359 (677)
T ss_dssp TTTEEEEECTTTC-CEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCS
T ss_pred eeEEEEEEECCCC-CEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccC
Confidence 5999999999 66666553 21 122233334466 678999999999999999999988776221
Q ss_pred ----------e--------------------------eEEEEcCCCEEEEEc----------------------------
Q 021744 193 ----------E--------------------------VGCMISEGPWIFIGV---------------------------- 208 (308)
Q Consensus 193 ----------~--------------------------v~~~~~~~~~l~~~~---------------------------- 208 (308)
+ ..++.++..++++..
T Consensus 360 ~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 439 (677)
T 1kb0_A 360 WASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTG 439 (677)
T ss_dssp SEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGT
T ss_pred cccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccc
Confidence 0 113345666766532
Q ss_pred ----------------CCcEEEEEcCCCceeeeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceecc
Q 021744 209 ----------------TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLK 270 (308)
Q Consensus 209 ----------------d~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~ 270 (308)
.+.|..||+.+++.+....+..++....+..+ +++.++.||.+++||..++ +.+.++.
T Consensus 440 ~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG----~~lw~~~ 515 (677)
T 1kb0_A 440 WNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATG----EKLWEAP 515 (677)
T ss_dssp CCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTC----CEEEEEE
T ss_pred cccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCC----ceeeeee
Confidence 16799999999998832223333333334433 7888899999999999998 6677666
Q ss_pred ccCCCeEE--EEecCCCeEEE
Q 021744 271 VHTDSNRA--HFSRDVTSLLG 289 (308)
Q Consensus 271 ~~~~~v~~--~~s~d~~~l~~ 289 (308)
........ .|..+|+.+++
T Consensus 516 ~~~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 516 TGTGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp CSSCCCSCCEEEEETTEEEEE
T ss_pred CCCCcccCCEEEEeCCEEEEE
Confidence 44332222 67788876653
No 217
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.11 E-value=3.3e-08 Score=85.82 Aligned_cols=217 Identities=8% Similarity=-0.009 Sum_probs=135.2
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCe-eeccCCC--cEEEEECCCCCCccc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWG-RNNNFNN--HSNNYRAGNSKNSNI 102 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~-~s~~~d~--~i~vwd~~~~~~~~~ 102 (308)
+.++++...++.|++||...+.. ..+.. . +... .++++|++.. +.+..++ .|.+++...+.....
T Consensus 142 g~lyv~d~~~~~I~~id~~~g~~---~~~~~---~-----~~~~-~ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 142 NTVLAYQRDDPRVRLISVDDNKV---TTVHP---G-----FKGG-KPAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTR 209 (409)
T ss_dssp TEEEEEETTTTEEEEEETTTTEE---EEEEE---T-----CCBC-BCEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEE
T ss_pred CCEEEEecCCCcEEEEECCCCEE---EEeec---c-----CCCC-ceeEecCCCcEEEEecCCCceEEEEEcCCCceeEE
Confidence 44677777778899998876510 00000 0 1111 3799999998 6666655 788888754432111
Q ss_pred c--cce-eeeeeeeeeeec-CCceEEeeCCCeEEEEEcCCCceeeeE----eeCcccce-E-EEEEeCC-CCEEEEeeCC
Q 021744 103 N--NRA-VIKTDILCRNWV-QGNCMYGEKCKFLHSWTVGDGFKLLTQ----LEGHQKVV-S-GITLPSG-SDKLYSGSKD 171 (308)
Q Consensus 103 ~--~~~-~~~~~~~~~~~~-~~~~~~g~~d~~i~iwd~~~~~~~~~~----~~~h~~~v-~-~~~~~~~-~~~l~s~s~d 171 (308)
. ... ....+..+++.+ ++.++....++.|+.||..++. .... ..++...- . .++|+|+ +.++++-..+
T Consensus 210 ~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~-~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 210 IGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQE-VTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp EEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCC-EEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred eeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCC-EEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 1 001 223367788888 5666556678899999998763 2111 12222222 3 9999995 5566666778
Q ss_pred CcEEEEeCCCCeEEEEEeCC---------------CeeE--EEEcCCCEEEEEc--CCcEEEEEcCCCceeeeeCC----
Q 021744 172 ETVRVWDCASGQCAGVINLG---------------GEVG--CMISEGPWIFIGV--TNFVKAWNTQTNTDLSLSGP---- 228 (308)
Q Consensus 172 g~v~~wd~~~~~~~~~~~~~---------------~~v~--~~~~~~~~l~~~~--d~~i~~wd~~~~~~~~~~~~---- 228 (308)
+.|+.|+.... ........ .... ++.++++++++-. ++.|+.||+.+++...+.++
T Consensus 289 ~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~ 367 (409)
T 3hrp_A 289 SSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVA 367 (409)
T ss_dssp TEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCB
T ss_pred CEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCC
Confidence 89999997643 22222121 1122 2346788666644 66999999888876655544
Q ss_pred -----------CCCEEEEEEeCC--EEEEEcCCCeEEEEEc
Q 021744 229 -----------VGQVYAMAVGND--LLFAGTQDGAILAWKF 256 (308)
Q Consensus 229 -----------~~~v~~~~~~~~--~l~~g~~dg~i~iwd~ 256 (308)
-.....++++++ ++++-..+++|+.+++
T Consensus 368 g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 368 SQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp SCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 246889999997 6667777888888775
No 218
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.10 E-value=5.1e-08 Score=80.77 Aligned_cols=199 Identities=12% Similarity=0.052 Sum_probs=125.6
Q ss_pred CCCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc-eeEEecCCCe-eeccCCCcEEEEECCCCCCcc
Q 021744 24 GGGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA-AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSN 101 (308)
Q Consensus 24 ~~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~-~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~ 101 (308)
+.+.++++...++.|..|+..++.. .. ... .... +++++|+|++ ++. +..|.+||.++++...
T Consensus 23 ~~~~l~~~d~~~~~i~~~d~~~~~~-----~~--~~~------~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 23 VSNSLLFVDIPAKKVCRWDSFTKQV-----QR--VTM------DAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVV 87 (297)
T ss_dssp TTTEEEEEETTTTEEEEEETTTCCE-----EE--EEC------SSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEE
T ss_pred CCCEEEEEECCCCEEEEEECCCCcE-----EE--EeC------CCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEE
Confidence 3467888888899999999876511 00 000 0112 6899999998 443 5679999997764321
Q ss_pred ccc---ceeeeeeeeeeeecCCceEEee------------CCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEE-
Q 021744 102 INN---RAVIKTDILCRNWVQGNCMYGE------------KCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKL- 165 (308)
Q Consensus 102 ~~~---~~~~~~~~~~~~~~~~~~~~g~------------~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l- 165 (308)
... ......+..+.+.++|.+..+. ..+.|..++.. + +. ..+..+......++|+|+++.|
T Consensus 88 ~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g-~~-~~~~~~~~~pngi~~spdg~~ly 164 (297)
T 3g4e_A 88 LATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-H-HV-KKYFDQVDISNGLDWSLDHKIFY 164 (297)
T ss_dssp EEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-S-CE-EEEEEEESBEEEEEECTTSCEEE
T ss_pred EEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-C-CE-EEEeeccccccceEEcCCCCEEE
Confidence 111 0112236678888999874443 12344444443 2 22 2233344567899999999866
Q ss_pred EEeeCCCcEEEEeC--CCCeEE--EEEe----CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCcee-eeeCCCCCEE
Q 021744 166 YSGSKDETVRVWDC--ASGQCA--GVIN----LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDL-SLSGPVGQVY 233 (308)
Q Consensus 166 ~s~s~dg~v~~wd~--~~~~~~--~~~~----~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~~~~v~ 233 (308)
++.+.++.|.+|++ .++... ..+. .......+ .+++++.++.. .+.|..||..+++.+ .+..+...++
T Consensus 165 v~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t 244 (297)
T 3g4e_A 165 YIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTT 244 (297)
T ss_dssp EEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEE
T ss_pred EecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCce
Confidence 55666889999987 455432 2222 12233333 46787777665 678999999988876 6666667899
Q ss_pred EEEEe-CC
Q 021744 234 AMAVG-ND 240 (308)
Q Consensus 234 ~~~~~-~~ 240 (308)
+++|. |+
T Consensus 245 ~~~f~g~d 252 (297)
T 3g4e_A 245 SCCFGGKN 252 (297)
T ss_dssp EEEEESGG
T ss_pred EEEEeCCC
Confidence 99998 66
No 219
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.09 E-value=1e-08 Score=88.79 Aligned_cols=256 Identities=7% Similarity=-0.049 Sum_probs=154.8
Q ss_pred CCCCCceEEecCC----CeEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCe-eecc----------CCC
Q 021744 23 GGGGGLSTADTRQ----KVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWG-RNNN----------FNN 87 (308)
Q Consensus 23 ~~~~~~~~s~s~d----~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~-~s~~----------~d~ 87 (308)
.++...+++...+ ++|.+.|..+.. .+ .+.+ .|... .++++|||+. +.+. .++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~-----vv-~~I~-----vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~ 149 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGR-----IL-GMTD-----GGFLP-HPVAAEDGSFFAQASTVFERIARGKRTD 149 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTE-----EE-EEEE-----ECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCE-----EE-EEEE-----CCCCC-ceEECCCCCEEEEEeccccccccCCCCC
Confidence 4555667776655 799999988761 11 1111 12222 4899999998 4443 467
Q ss_pred cEEEEECCCCCCcccccce------eeeeeeeeeeecCCceEE-ee--CCCeEEEEEcCCCceeeeEeeCcccceEEEEE
Q 021744 88 HSNNYRAGNSKNSNINNRA------VIKTDILCRNWVQGNCMY-GE--KCKFLHSWTVGDGFKLLTQLEGHQKVVSGITL 158 (308)
Q Consensus 88 ~i~vwd~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-g~--~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~ 158 (308)
.|.++|..+.+........ .......+.+++++..+. +. .++.|.+.|+.+. +.+.++.--. +...
T Consensus 150 ~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~-kvv~~I~v~g----~~~~ 224 (426)
T 3c75_H 150 YVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGK-TFDRMLDVPD----CYHI 224 (426)
T ss_dssp EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTT-EEEEEEECCS----EEEE
T ss_pred EEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCC-eEEEEEEcCC----ceee
Confidence 8999999887655332211 012356788999997733 33 2688999999998 6777776321 1233
Q ss_pred eCCC-CEEEEeeCCCcEEEEeCCCCeEEEEE----eC-CCee---EEEEcCCCEEE-EEcCCcEEEEEcCCCceee---e
Q 021744 159 PSGS-DKLYSGSKDETVRVWDCASGQCAGVI----NL-GGEV---GCMISEGPWIF-IGVTNFVKAWNTQTNTDLS---L 225 (308)
Q Consensus 159 ~~~~-~~l~s~s~dg~v~~wd~~~~~~~~~~----~~-~~~v---~~~~~~~~~l~-~~~d~~i~~wd~~~~~~~~---~ 225 (308)
.|++ ..+++.+.||++.+.+..+++..... .. ..++ ..+.+++..++ +...+.+.+.|+....... +
T Consensus 225 ~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~ 304 (426)
T 3c75_H 225 FPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPI 304 (426)
T ss_dssp EEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCE
T ss_pred ccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeee
Confidence 3433 56677778888888888666554322 11 1111 12345666554 4457899999987654321 1
Q ss_pred eC----------CCCCEEEEEEeCC--EEEEEc----------CCCeEEEEEcCCCCcccccceeccccCCCeEEEEecC
Q 021744 226 SG----------PVGQVYAMAVGND--LLFAGT----------QDGAILAWKFNVTTNCFEPAASLKVHTDSNRAHFSRD 283 (308)
Q Consensus 226 ~~----------~~~~v~~~~~~~~--~l~~g~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~s~d 283 (308)
.. .......++++|+ .++... ..+.|.++|+.+. +.+.++.....+....|+||
T Consensus 305 ~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~----kvv~~I~vg~~P~gia~spD 380 (426)
T 3c75_H 305 EALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG----ERINKIELGHEIDSINVSQD 380 (426)
T ss_dssp ESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC----CEEEEEEEEEEECEEEECCS
T ss_pred eeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCC----eEEEEEECCCCcCeEEEccC
Confidence 10 0111123688888 433332 1357999999997 66777764443444499999
Q ss_pred CC-eEEEee--ceEEEEee
Q 021744 284 VT-SLLGSV--SFIMFIGQ 299 (308)
Q Consensus 284 ~~-~l~~s~--s~~i~~~~ 299 (308)
|+ +++++. +..|.+..
T Consensus 381 g~~~lyv~n~~s~~VsVID 399 (426)
T 3c75_H 381 AEPLLYALSAGTQTLHIYD 399 (426)
T ss_dssp SSCEEEEEETTTTEEEEEE
T ss_pred CCEEEEEEcCCCCeEEEEE
Confidence 99 777665 44444433
No 220
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.08 E-value=1.2e-08 Score=85.37 Aligned_cols=246 Identities=11% Similarity=0.018 Sum_probs=146.9
Q ss_pred CCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc-eeEEecCCCeeeccCCCcEEEEECCCCCCcccc
Q 021744 25 GGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA-AKRFANNTWGRNNNFNNHSNNYRAGNSKNSNIN 103 (308)
Q Consensus 25 ~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~-~i~~s~~g~~~s~~~d~~i~vwd~~~~~~~~~~ 103 (308)
.+..+..++.++.|..|| .++.. +.. .+. +.... .+.+.+++....++.+ |..+|. +++.....
T Consensus 29 ~~g~l~v~t~~~~l~~~d-~~g~~-----~~~-~~~-----~~~~~~~~~~~~~g~l~v~t~~--l~~~d~-~g~~~~~~ 93 (330)
T 3hxj_A 29 KNGTIYLGSSNKNLYAIN-TDGSV-----KWF-FKS-----GEIIECRPSIGKDGTIYFGSDK--VYAINP-DGTEKWRF 93 (330)
T ss_dssp TTSCEECSSTTTTTEEEC-TTSCE-----EES-SCG-----GGEEEECCEETTTTEECCSSCE--EEEECC-CGGGGGGS
T ss_pred cCCeEEEEcCCCEEEEEC-CCCcE-----EEE-Eec-----CCCcccceEEecCCcEEEecCc--EEEECC-CCcEEEEE
Confidence 455677778888899999 65511 110 110 11111 4566667766444444 888886 44433211
Q ss_pred cceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCe
Q 021744 104 NRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQ 183 (308)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~ 183 (308)
.. ........... ++....++.++.|..+|.. + +....+..+...+.++...+++. +..++.++.+..+|.. ++
T Consensus 94 ~~-~~~~~~~~~~~-~~~l~v~t~~~~l~~~d~~-g-~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~ 167 (330)
T 3hxj_A 94 DT-KKAIVSDFTIF-EDILYVTSMDGHLYAINTD-G-TEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GT 167 (330)
T ss_dssp CC------CCEEEE-TTEEEEECTTSEEEEECTT-S-CEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SC
T ss_pred EC-CCCcccCceEE-CCEEEEEecCCEEEEEcCC-C-CEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CC
Confidence 11 11111112222 6667778889999999988 6 45555555555667777777666 6667788999999999 88
Q ss_pred EEEEEeCCC-eeEEEE--cCCCEEEEEcCCcEEEEEcCCCcee-eeeCCCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCC
Q 021744 184 CAGVINLGG-EVGCMI--SEGPWIFIGVTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND-LLFAGTQDGAILAWKFNV 258 (308)
Q Consensus 184 ~~~~~~~~~-~v~~~~--~~~~~l~~~~d~~i~~wd~~~~~~~-~~~~~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~ 258 (308)
.+..+.... .+.++. .++.+.+ +. +.|..+| .+++.. ........+.++...++ .+..++.++.|..+|..
T Consensus 168 ~~~~~~~~~~~~~~~~~d~~g~l~v-~t-~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~- 243 (330)
T 3hxj_A 168 EKWRFKTNDAITSAASIGKDGTIYF-GS-DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPD- 243 (330)
T ss_dssp EEEEEECSSCCCSCCEECTTCCEEE-ES-SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECTT-
T ss_pred EeEEEecCCCceeeeEEcCCCEEEE-Ee-CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECCC-
Confidence 777776332 233332 4555444 44 8999999 666655 44444566888888888 77778888888888743
Q ss_pred CCcccccceeccccCCCeEE-EEecCCCeEEEeeceEEEEee
Q 021744 259 TTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSVSFIMFIGQ 299 (308)
Q Consensus 259 ~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~s~~i~~~~ 299 (308)
+ +.+..+......+.. .+.+++.+.+++....|+...
T Consensus 244 g----~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 244 G----TEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAIN 281 (330)
T ss_dssp S----CEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEEC
T ss_pred C----CEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEEC
Confidence 3 333334333333344 555566666655554555554
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.08 E-value=2.9e-08 Score=82.58 Aligned_cols=215 Identities=8% Similarity=0.034 Sum_probs=136.0
Q ss_pred eeEEecCCC-e-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCceEEee-CCCeEEEEEcCCCceeeeEee
Q 021744 71 AKRFANNTW-G-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNCMYGE-KCKFLHSWTVGDGFKLLTQLE 147 (308)
Q Consensus 71 ~i~~s~~g~-~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~d~~i~iwd~~~~~~~~~~~~ 147 (308)
...|+|+|+ . ++...++.|..|+.. ++.. ........+..+.+.++|.++.+. .++.|.+|+.. + + +..+.
T Consensus 49 gp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~~--~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g-~-~~~~~ 122 (305)
T 3dr2_A 49 GPAWWEAQRTLVWSDLVGRRVLGWRED-GTVD--VLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-G-Q-AHLLV 122 (305)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEEETT-SCEE--EEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S-C-EEEEE
T ss_pred CCeEeCCCCEEEEEECCCCEEEEEeCC-CCEE--EEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-C-C-EEEEE
Confidence 689999998 4 888888999999873 4311 122223346778888999885555 45789999986 4 2 22222
Q ss_pred Cc-----ccceEEEEEeCCCCEEEE----eeC-------------CCcEEEEeCCCCeEEEEEeCCCe-eEEEEcCCCEE
Q 021744 148 GH-----QKVVSGITLPSGSDKLYS----GSK-------------DETVRVWDCASGQCAGVINLGGE-VGCMISEGPWI 204 (308)
Q Consensus 148 ~h-----~~~v~~~~~~~~~~~l~s----~s~-------------dg~v~~wd~~~~~~~~~~~~~~~-v~~~~~~~~~l 204 (308)
.+ ...+..+++++++++.++ |.. .+.|..+|..+++.........+ -.++.++++.|
T Consensus 123 ~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~p~gl~~spdg~~l 202 (305)
T 3dr2_A 123 GRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADLDHPNGLAFSPDEQTL 202 (305)
T ss_dssp CEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEESSEEEEEECTTSSEE
T ss_pred eccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEecCCCCcceEEcCCCCEE
Confidence 11 134678999999998886 432 25688888876654433222222 22456888877
Q ss_pred EEEc-C------CcEEEEEcCCCcee---ee-eCCCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCCCcccccceecccc
Q 021744 205 FIGV-T------NFVKAWNTQTNTDL---SL-SGPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAASLKVH 272 (308)
Q Consensus 205 ~~~~-d------~~i~~wd~~~~~~~---~~-~~~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~ 272 (308)
+++. . +.|.+||+..+... .+ .........+++.++ .|.+++.+ .|.+|+... +.+..+..+
T Consensus 203 yv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~-gv~~~~~~g-----~~~~~~~~~ 276 (305)
T 3dr2_A 203 YVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGT-GVCVFDSDG-----QLLGHIPTP 276 (305)
T ss_dssp EEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSS-EEEEECTTS-----CEEEEEECS
T ss_pred EEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCC-cEEEECCCC-----CEEEEEECC
Confidence 6553 3 68999998765421 11 112334567888888 55555554 599998753 455555544
Q ss_pred CCCeEE-EEecCCCeEEEeeceEEEEe
Q 021744 273 TDSNRA-HFSRDVTSLLGSVSFIMFIG 298 (308)
Q Consensus 273 ~~~v~~-~~s~d~~~l~~s~s~~i~~~ 298 (308)
.. +.. +|+++++.|..+.+..||..
T Consensus 277 ~~-~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 277 GT-ASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp SC-CCEEEECTTSCEEEEEETTEEEEE
T ss_pred Cc-eeEEEEeCCCCEEEEEcCCeEEEE
Confidence 43 555 99999887776655555544
No 222
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.07 E-value=9.6e-08 Score=88.38 Aligned_cols=190 Identities=10% Similarity=0.025 Sum_probs=115.2
Q ss_pred CCceEEecCCCeEEEeecCCCCC-CCCCcccccCCCCCCc-ccc----ccceeEEecCCCe-eeccCCCcEEEEECCCCC
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNR-FPCPYLHRELPLPPAA-TAN----GAAAKRFANNTWG-RNNNFNNHSNNYRAGNSK 98 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~-~~~~~~~~~~~~~~~~-~gh----~~~~i~~s~~g~~-~s~~~d~~i~vwd~~~~~ 98 (308)
+..++.++.++.|+.+|+.+++. +.... ...... ... ....+++ .+.. +.++.|+.|..+|.++++
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~ 142 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDP-----QSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQ 142 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECC-----CCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcC-----CCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCC
Confidence 55677778889999999988732 11100 000000 000 0001222 3445 788889999999999987
Q ss_pred Ccccccce-ee---eeeeeeeeecCCceEEee------CCCeEEEEEcCCCceeeeEeeCcc------------------
Q 021744 99 NSNINNRA-VI---KTDILCRNWVQGNCMYGE------KCKFLHSWTVGDGFKLLTQLEGHQ------------------ 150 (308)
Q Consensus 99 ~~~~~~~~-~~---~~~~~~~~~~~~~~~~g~------~d~~i~iwd~~~~~~~~~~~~~h~------------------ 150 (308)
.+-..... .. ..+...-...++..+.+. .++.|+.||..++ +.+..+....
T Consensus 143 ~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG-~~~W~~~~~~~~p~~~~~~~~~~~~~~~ 221 (689)
T 1yiq_A 143 RAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETG-KEAWRFYTVPGDPKLPPEGKGMEIAAKT 221 (689)
T ss_dssp EEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTC-CEEEEEESSCCCTTSCCCSHHHHHHHTT
T ss_pred EeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCC-cEEEEecccCCCcccccccccccccccc
Confidence 65322211 10 011111111245554443 3789999999999 6666554210
Q ss_pred -------------cceEEEEEeCCCCEEEEeeCCCc-------------------EEEEeCCCCeEEEEEeCC-C-----
Q 021744 151 -------------KVVSGITLPSGSDKLYSGSKDET-------------------VRVWDCASGQCAGVINLG-G----- 192 (308)
Q Consensus 151 -------------~~v~~~~~~~~~~~l~s~s~dg~-------------------v~~wd~~~~~~~~~~~~~-~----- 192 (308)
..-..++++|+..+++.++.++. |..+|.++|+.+..++.. .
T Consensus 222 ~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~ 301 (689)
T 1yiq_A 222 WFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDY 301 (689)
T ss_dssp CCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCC
T ss_pred cCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccc
Confidence 01125788998889998888764 999999999999988731 1
Q ss_pred ----eeE--EEEcCCC---EEEEEc-CCcEEEEEcCCCcee
Q 021744 193 ----EVG--CMISEGP---WIFIGV-TNFVKAWNTQTNTDL 223 (308)
Q Consensus 193 ----~v~--~~~~~~~---~l~~~~-d~~i~~wd~~~~~~~ 223 (308)
+.. .+..+++ .++.+. +|.++++|.++++.+
T Consensus 302 ~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 342 (689)
T 1yiq_A 302 TATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELL 342 (689)
T ss_dssp CCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred cCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEe
Confidence 111 1123554 566665 899999999999876
No 223
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.06 E-value=6.7e-08 Score=82.34 Aligned_cols=211 Identities=8% Similarity=-0.063 Sum_probs=133.4
Q ss_pred EEecCCCe-eeccC-----CCcEEEEECCCCCCcccccceeeeeeeeeeeecCCceE-Eee----------CCCeEEEEE
Q 021744 73 RFANNTWG-RNNNF-----NNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNCM-YGE----------KCKFLHSWT 135 (308)
Q Consensus 73 ~~s~~g~~-~s~~~-----d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~----------~d~~i~iwd 135 (308)
...|++.. ..... +++|.+.|..+.+.+.....+ .... +.++|++..+ .+. .++.|.+||
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG--~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG--FLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC--SSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC--CCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 44677777 33332 679999999888765332221 2234 8999999762 222 367899999
Q ss_pred cCCCceeeeEeeCcc-------cceEEEEEeCCCCEEEEeeC--CCcEEEEeCCCCeEEEEEeCCCeeEEEEcC-CCE-E
Q 021744 136 VGDGFKLLTQLEGHQ-------KVVSGITLPSGSDKLYSGSK--DETVRVWDCASGQCAGVINLGGEVGCMISE-GPW-I 204 (308)
Q Consensus 136 ~~~~~~~~~~~~~h~-------~~v~~~~~~~~~~~l~s~s~--dg~v~~wd~~~~~~~~~~~~~~~v~~~~~~-~~~-l 204 (308)
..+. +.+.++.-.. .....++++||+++++.+.. ++.|.++|+.+++.+.++..... ..+.|. .+. +
T Consensus 116 ~~t~-~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~-~~~~P~g~~~~~ 193 (386)
T 3sjl_D 116 PVTL-LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC-YHIFPTAPDTFF 193 (386)
T ss_dssp TTTC-CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-EEEEEEETTEEE
T ss_pred CCCC-eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc-ceeecCCCceeE
Confidence 9998 6777664211 24567999999999887764 68999999999999999986553 223343 333 3
Q ss_pred EEEcCCcEEEEEcCC-Ccee-eeeCC----CCCEE-EEEEe-CC-EEEEEcCCCeEEEEEcCCCCcccccceecc-----
Q 021744 205 FIGVTNFVKAWNTQT-NTDL-SLSGP----VGQVY-AMAVG-ND-LLFAGTQDGAILAWKFNVTTNCFEPAASLK----- 270 (308)
Q Consensus 205 ~~~~d~~i~~wd~~~-~~~~-~~~~~----~~~v~-~~~~~-~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~----- 270 (308)
+.+.||.+.+.++.+ ++.. ....+ ..++. ...|. ++ .++..+.+|.|++.|+.+... +.+..+.
T Consensus 194 ~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~--~v~~~~~~~~~~ 271 (386)
T 3sjl_D 194 MHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDA--KFLPAVEALTEA 271 (386)
T ss_dssp EEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSC--EECCCEESSCHH
T ss_pred EECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcc--eeecceeccccc
Confidence 455588888888876 4432 11111 12222 23554 45 555567789999999976532 2222221
Q ss_pred -----ccCCCeEE-EEecCCCeEEEe
Q 021744 271 -----VHTDSNRA-HFSRDVTSLLGS 290 (308)
Q Consensus 271 -----~~~~~v~~-~~s~d~~~l~~s 290 (308)
-....... ++++++..+.+.
T Consensus 272 ~~~~g~~p~g~q~~a~~~~~~~lyV~ 297 (386)
T 3sjl_D 272 ERADGWRPGGWQQVAYHRALDRIYLL 297 (386)
T ss_dssp HHHTTEEECSSSCEEEETTTTEEEEE
T ss_pred cccccccCCCcceeeECCCCCeEEEE
Confidence 01122233 778888877754
No 224
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.05 E-value=4.4e-07 Score=77.64 Aligned_cols=216 Identities=10% Similarity=-0.025 Sum_probs=130.8
Q ss_pred CCCeEEEeecCCCCCCCCCcccccCCCC---CCccccccceeEEecCCCe-eeccC--CCcEEEEECCCCCCccc-ccce
Q 021744 34 RQKVCNYWRAGKCNRFPCPYLHRELPLP---PAATANGAAAKRFANNTWG-RNNNF--NNHSNNYRAGNSKNSNI-NNRA 106 (308)
Q Consensus 34 ~d~~i~~W~~~~~~~~~~~~~~~~~~~~---~~~~gh~~~~i~~s~~g~~-~s~~~--d~~i~vwd~~~~~~~~~-~~~~ 106 (308)
.++.|.+||..+... ..+.+.+ ....+.....++++|||++ +.+.. +++|.++| ++++.... ...
T Consensus 95 ~~~~v~viD~~t~~~------~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~- 166 (373)
T 2mad_H 95 RTDYVEVFDPVTFLP------IADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS- 166 (373)
T ss_pred CCCeEEEEECCCCcE------EEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC-
Confidence 367899999876511 0111111 1101111116899999999 55543 58899999 88765422 111
Q ss_pred eeeeeeeeeeecCC--ceEEeeCCCeEEEEEcCCCceeeeEee-----Ccccce-EEEEEeCCCCEEEEeeCCCcEEEEe
Q 021744 107 VIKTDILCRNWVQG--NCMYGEKCKFLHSWTVGDGFKLLTQLE-----GHQKVV-SGITLPSGSDKLYSGSKDETVRVWD 178 (308)
Q Consensus 107 ~~~~~~~~~~~~~~--~~~~g~~d~~i~iwd~~~~~~~~~~~~-----~h~~~v-~~~~~~~~~~~l~s~s~dg~v~~wd 178 (308)
..++.+.+.+ .+++.+.||.+.++|. ++ +...... ....++ ....+.+++..++..+..+.+.+.|
T Consensus 167 ----~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid 240 (373)
T 2mad_H 167 ----PTCYHIHPGAPSTFYLLCAQGGLAKTDH-AG-GAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQAD 240 (373)
T ss_pred ----CceEEEEeCCCceEEEEcCCCCEEEEEC-CC-cEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEe
Confidence 1123445555 2366678999999999 76 3332211 111221 2345666665555445788999999
Q ss_pred CCCCe--EEEEEeC-----------CC--eeEEEEcCCCEEEEEc-----------CCcEEEEEcCCCcee-eeeCCCCC
Q 021744 179 CASGQ--CAGVINL-----------GG--EVGCMISEGPWIFIGV-----------TNFVKAWNTQTNTDL-SLSGPVGQ 231 (308)
Q Consensus 179 ~~~~~--~~~~~~~-----------~~--~v~~~~~~~~~l~~~~-----------d~~i~~wd~~~~~~~-~~~~~~~~ 231 (308)
+.+.. .+..+.. +. ....+.++++.+++.. ++.|.++|+.+++.+ ++. ....
T Consensus 241 ~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~~ 319 (373)
T 2mad_H 241 ISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHD 319 (373)
T ss_pred ccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCCC
Confidence 97652 2333321 11 1123457777776542 247999999999887 453 3346
Q ss_pred EEEEEEeCC---EEEEEc-CCCeEEEEEcCCCCccccccee
Q 021744 232 VYAMAVGND---LLFAGT-QDGAILAWKFNVTTNCFEPAAS 268 (308)
Q Consensus 232 v~~~~~~~~---~l~~g~-~dg~i~iwd~~~~~~~~~~~~~ 268 (308)
...++|+|| +++++. .++.|.++|+.+. +.+..
T Consensus 320 p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~----~vv~~ 356 (373)
T 2mad_H 320 VDAISVAQDGGPDLYALSAGTEVLHIYDAGAG----DQDQS 356 (373)
T ss_pred cCeEEECCCCCeEEEEEcCCCCeEEEEECCCC----CEEee
Confidence 889999998 466666 5899999999987 55555
No 225
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.03 E-value=2.1e-08 Score=93.01 Aligned_cols=222 Identities=11% Similarity=0.075 Sum_probs=134.6
Q ss_pred CCceE-----EecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCe-eeccCCC------------
Q 021744 26 GGLST-----ADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWG-RNNNFNN------------ 87 (308)
Q Consensus 26 ~~~~~-----s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~-~s~~~d~------------ 87 (308)
+.+|| .|+.+.+|++||+.++. .......+.....++|+ ||+. +.++.+.
T Consensus 140 g~~lAy~~~~~G~~~~~i~v~dl~tg~-----------~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~ 207 (693)
T 3iuj_A 140 GRILAYSLSLAGSDWREIHLMDVESKQ-----------PLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQ 207 (693)
T ss_dssp SSEEEEEEECSSCCEEEEEEEETTTCS-----------EEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCC
T ss_pred CCEEEEEEecCCCceEEEEEEECCCCC-----------CCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCC
Confidence 45555 23444789999998871 11111111111157999 9988 6666664
Q ss_pred -cEEEEECCCCCCcccccce----eeeeeeeeeeecCCce--EEee---CCCeEEEEEcCCCceeeeEeeCcccceEEEE
Q 021744 88 -HSNNYRAGNSKNSNINNRA----VIKTDILCRNWVQGNC--MYGE---KCKFLHSWTVGDGFKLLTQLEGHQKVVSGIT 157 (308)
Q Consensus 88 -~i~vwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~g~---~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~ 157 (308)
.|++|++.+++........ +......+.+++++.. ++.. ....|+++|+.++......+..+.......
T Consensus 208 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~- 286 (693)
T 3iuj_A 208 HKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL- 286 (693)
T ss_dssp CEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-
T ss_pred cEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-
Confidence 3999999776532111111 2223456788999976 2222 336899999987633456666676666655
Q ss_pred EeCCCCEEE-EeeCC---CcEEEEeCCCCeE--EEEE-eCCCeeEEEEcCCCEEEEEc--CC--cEEEEEcCCCceeeee
Q 021744 158 LPSGSDKLY-SGSKD---ETVRVWDCASGQC--AGVI-NLGGEVGCMISEGPWIFIGV--TN--FVKAWNTQTNTDLSLS 226 (308)
Q Consensus 158 ~~~~~~~l~-s~s~d---g~v~~wd~~~~~~--~~~~-~~~~~v~~~~~~~~~l~~~~--d~--~i~~wd~~~~~~~~~~ 226 (308)
+++++..|+ ....+ +.|..+|+.+++. ...+ .+...+..+.++++.|+... ++ .|++||+..+....+.
T Consensus 287 ~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~ 366 (693)
T 3iuj_A 287 VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVLTVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVA 366 (693)
T ss_dssp EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEETTEEEEEEEETTEEEEEEECTTSCEEEEEC
T ss_pred EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEEEEEEECCEEEEEEEECCeeEEEEEECCCCeeEEee
Confidence 566666554 44333 5799999988654 2233 33333337778888877554 44 7899999876655443
Q ss_pred -CCCCCEEEEEEeCC---EEEEEcC---CCeEEEEEcCCCC
Q 021744 227 -GPVGQVYAMAVGND---LLFAGTQ---DGAILAWKFNVTT 260 (308)
Q Consensus 227 -~~~~~v~~~~~~~~---~l~~g~~---dg~i~iwd~~~~~ 260 (308)
.....+..+.++++ ++++.+. -+.|+.||+.+++
T Consensus 367 ~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 367 LPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp CSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred cCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 23456777777776 3333322 2789999987753
No 226
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.03 E-value=2.6e-07 Score=85.31 Aligned_cols=190 Identities=11% Similarity=0.041 Sum_probs=115.5
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCc------cccccceeEEecCCCe-eeccCCCcEEEEECCCCC
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAA------TANGAAAKRFANNTWG-RNNNFNNHSNNYRAGNSK 98 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~------~gh~~~~i~~s~~g~~-~s~~~d~~i~vwd~~~~~ 98 (308)
+..++.++.++.|.-+|+.+++. +.+..+..... .......+++ .+.. +.++.|+.|..+|..+++
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~-----~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~ 149 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNR-----IWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGK 149 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEE-----EEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEECCCCeEEEEECCCCcE-----EEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCC
Confidence 55667777789999999888721 11101110000 0000112333 3445 778889999999999887
Q ss_pred Ccccccce-e-e--eeeeeeeeecCCceEEeeC------CCeEEEEEcCCCceeeeEeeCcccc----------------
Q 021744 99 NSNINNRA-V-I--KTDILCRNWVQGNCMYGEK------CKFLHSWTVGDGFKLLTQLEGHQKV---------------- 152 (308)
Q Consensus 99 ~~~~~~~~-~-~--~~~~~~~~~~~~~~~~g~~------d~~i~iwd~~~~~~~~~~~~~h~~~---------------- 152 (308)
.+-..... . . ..+...-...++..+.++. ++.|+.+|..++ +.+..+......
T Consensus 150 ~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG-~~~W~~~~~~~~~~~~~~~~~~~~g~~~ 228 (677)
T 1kb0_A 150 EVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETG-ERKWRWFSVPGDPSKPFEDESMKRAART 228 (677)
T ss_dssp EEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTC-CEEEEEESSCCCTTSCCSSHHHHHHHTT
T ss_pred EEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCC-cEEEEeccCCCCcccccccccccccccc
Confidence 65322211 0 0 1111111122444444443 799999999999 666665432111
Q ss_pred ----------------eEEEEEeCCCCEEEEeeCCC-------------------cEEEEeCCCCeEEEEEeCCC-----
Q 021744 153 ----------------VSGITLPSGSDKLYSGSKDE-------------------TVRVWDCASGQCAGVINLGG----- 192 (308)
Q Consensus 153 ----------------v~~~~~~~~~~~l~s~s~dg-------------------~v~~wd~~~~~~~~~~~~~~----- 192 (308)
...++++|++..++.++.++ +|..+|.++++.+..++...
T Consensus 229 w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd 308 (677)
T 1kb0_A 229 WDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWD 308 (677)
T ss_dssp SCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSC
T ss_pred ccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccc
Confidence 13578899888888877664 59999999999999887311
Q ss_pred ------eeE-EEEcCC---CEEEEEc-CCcEEEEEcCCCcee
Q 021744 193 ------EVG-CMISEG---PWIFIGV-TNFVKAWNTQTNTDL 223 (308)
Q Consensus 193 ------~v~-~~~~~~---~~l~~~~-d~~i~~wd~~~~~~~ 223 (308)
++. ....++ ..++.+. +|.++++|.++++.+
T Consensus 309 ~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l 350 (677)
T 1kb0_A 309 YTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFI 350 (677)
T ss_dssp CCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred cccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEe
Confidence 111 112366 5666666 899999999999887
No 227
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.98 E-value=9.9e-07 Score=75.99 Aligned_cols=217 Identities=9% Similarity=-0.052 Sum_probs=137.4
Q ss_pred EEe--cCCCe--eeccCCCcEEEEECCCC--CCcccccc--------eeeeeeeeeeeecCCceEEeeCC------CeEE
Q 021744 73 RFA--NNTWG--RNNNFNNHSNNYRAGNS--KNSNINNR--------AVIKTDILCRNWVQGNCMYGEKC------KFLH 132 (308)
Q Consensus 73 ~~s--~~g~~--~s~~~d~~i~vwd~~~~--~~~~~~~~--------~~~~~~~~~~~~~~~~~~~g~~d------~~i~ 132 (308)
.++ +++++ +++..+++|.|.|+.+. ++...... .-......+...|++.+++...+ +.|.
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~ 167 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGIL 167 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEE
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEE
Confidence 346 77887 88889999999999633 21111100 01112445667788844554333 7899
Q ss_pred EEEcCCCceeeeEeeCccc---ceEEEEEeCCCCEEEEee-------------------CCCcEEEEeCCCCeEEEEEeC
Q 021744 133 SWTVGDGFKLLTQLEGHQK---VVSGITLPSGSDKLYSGS-------------------KDETVRVWDCASGQCAGVINL 190 (308)
Q Consensus 133 iwd~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~s~s-------------------~dg~v~~wd~~~~~~~~~~~~ 190 (308)
++|.++. +.+.++..... .-..+-|+|+++.+++.. .+.+|.+||+.+++.+.++..
T Consensus 168 vlD~~T~-~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 168 MLDHYSF-EPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp EECTTTC-CEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred EEECCCC-eEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 9999998 77877763222 234578899999888885 478999999999998988885
Q ss_pred CC---eeEE--E--EcCCCEEEEE-------cCCcEEEEEcCCCcee---e--eeCC----------------CCCEEEE
Q 021744 191 GG---EVGC--M--ISEGPWIFIG-------VTNFVKAWNTQTNTDL---S--LSGP----------------VGQVYAM 235 (308)
Q Consensus 191 ~~---~v~~--~--~~~~~~l~~~-------~d~~i~~wd~~~~~~~---~--~~~~----------------~~~v~~~ 235 (308)
.. .... + .+++++++++ .+++|.+|....++.. . +... ......|
T Consensus 247 g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 247 GEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp CTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE
T ss_pred CCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEE
Confidence 41 1111 2 4778877653 3457776655444211 1 1110 2346789
Q ss_pred EEeCC---EEEEEcCCCeEEEEEcCCCCcccccceeccccC----------C----CeEE-EEecCCCeEEEee
Q 021744 236 AVGND---LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHT----------D----SNRA-HFSRDVTSLLGSV 291 (308)
Q Consensus 236 ~~~~~---~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~----------~----~v~~-~~s~d~~~l~~s~ 291 (308)
.+++| +.++.-..+.|.+||+..... .+.+..+.... . .-.. .++|||++|+++.
T Consensus 327 ~lS~DGrfLYVSnrg~d~VavfdV~d~~~-~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 327 DISLDDKFLYLSLWGIGEVRQYDISNPFK-PVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EECTTSCEEEEEETTTTEEEEEECSSTTS-CEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCC-cEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 99999 445555688999999864311 24444443221 1 2344 9999999998665
No 228
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.98 E-value=1.5e-07 Score=76.04 Aligned_cols=186 Identities=11% Similarity=0.001 Sum_probs=124.9
Q ss_pred eeEEecCCCe-eeccC--CCcEEEEECCCCCCcccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEee
Q 021744 71 AKRFANNTWG-RNNNF--NNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLE 147 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~ 147 (308)
.++|+|++.. ++.+. +++|++.|+.+++...............+.+..+..+++.-.++.+.++|..+. +.+.++.
T Consensus 25 Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~-~v~~~i~ 103 (266)
T 2iwa_A 25 GLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTL-SNIKNFT 103 (266)
T ss_dssp EEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTT-EEEEEEE
T ss_pred cEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCC-cEEEEEE
Confidence 5899998766 55543 688999999988765332111110111233332212255667899999999998 7777775
Q ss_pred CcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEeCC---Ce---eEEE-EcCCCEEEEEc-CCcEEEEEcCC
Q 021744 148 GHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLG---GE---VGCM-ISEGPWIFIGV-TNFVKAWNTQT 219 (308)
Q Consensus 148 ~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~~---~~---v~~~-~~~~~~l~~~~-d~~i~~wd~~~ 219 (308)
-.... .+.+.+|++.++.+..+++|.++|.++.+.+..+... .+ ...+ +.++++.+... ++.|.+.|..+
T Consensus 104 ~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~t 181 (266)
T 2iwa_A 104 HQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKD 181 (266)
T ss_dssp CCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTT
T ss_pred CCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCC
Confidence 32121 2445567777766667899999999999988888732 22 2222 34665444443 78999999999
Q ss_pred Ccee-eeeCC-------------CCCEEEEEEeCC---EEEEEcCCCeEEEEEcCCC
Q 021744 220 NTDL-SLSGP-------------VGQVYAMAVGND---LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 220 ~~~~-~~~~~-------------~~~v~~~~~~~~---~l~~g~~dg~i~iwd~~~~ 259 (308)
++.. .+... ....+.|+++|+ +++++...++|...++...
T Consensus 182 g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 182 GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 9877 33321 136789999998 7888888999999998764
No 229
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.97 E-value=6.7e-08 Score=80.89 Aligned_cols=210 Identities=10% Similarity=0.045 Sum_probs=133.6
Q ss_pred CCCeeeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCcccceEEE
Q 021744 77 NTWGRNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGI 156 (308)
Q Consensus 77 ~g~~~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~ 156 (308)
++....++.++.|..+|.+ ++..... ......+......+++....++.++.|..+|.. + +.+..+......+.++
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~-~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g-~~~~~~~~~~~~~~~~ 182 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRF-KTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-G-TEKWRFKTNDAITSAA 182 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEE-ECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-S-CEEEEEECSSCCCSCC
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEE-cCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-C-CEeEEEecCCCceeee
Confidence 4444677788889999986 5432111 111112344455557777788888999999998 6 5566666555667778
Q ss_pred EEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEeCC-CeeEEE--EcCCCEEEEEcCCcEEEEEcCCCceeeeeCCCCCEE
Q 021744 157 TLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLG-GEVGCM--ISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVY 233 (308)
Q Consensus 157 ~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~~-~~v~~~--~~~~~~l~~~~d~~i~~wd~~~~~~~~~~~~~~~v~ 233 (308)
.+.+++...+.. +.+..+| .+++.+..+... ..+.++ .+++.+.+.+.++.+..+|........+......+.
T Consensus 183 ~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~g~~~~~~~~~~~~~~ 258 (330)
T 3hxj_A 183 SIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPDGTEKWRFKTGKRIES 258 (330)
T ss_dssp EECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECTTSCEEEEEECSSCCCS
T ss_pred EEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECCCCCEeEEeeCCCCccc
Confidence 887777755544 7899999 777777766633 334343 345566555567888888754333334444444444
Q ss_pred EEEEeCC-EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEeeceEEEEee
Q 021744 234 AMAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSVSFIMFIGQ 299 (308)
Q Consensus 234 ~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~s~~i~~~~ 299 (308)
++.+.++ .|..++.+|.|..+|. ++ +.+..+......+.+ ...++|.+.+++....+++..
T Consensus 259 ~~~~~~~g~l~v~t~~ggl~~~d~-~g----~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~ 321 (330)
T 3hxj_A 259 SPVIGNTDTIYFGSYDGHLYAINP-DG----TEKWNFETGSWIIATPVIDENGTIYFGTRNGKFYALF 321 (330)
T ss_dssp CCEECTTSCEEEECTTCEEEEECT-TS----CEEEEEECSSCCCSCCEECTTCCEEEECTTSCEEEEE
T ss_pred cceEcCCCeEEEecCCCCEEEECC-CC----cEEEEEEcCCccccceEEcCCCEEEEEcCCCeEEEEe
Confidence 5666656 7888888999999985 44 434444444455556 666888877776655555544
No 230
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.96 E-value=1.4e-07 Score=78.37 Aligned_cols=204 Identities=9% Similarity=0.025 Sum_probs=123.4
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccc-cc-eeEEecCCCe-eeccCCCcEEEEECCCCCCccc
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANG-AA-AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNI 102 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~-~~-~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~ 102 (308)
+.+++++..++.|..|+.... . ..+..+. .. .++++++|++ ++...++.|.+|+.+ ++....
T Consensus 57 ~~l~~~d~~~~~i~~~~~~g~-~-------------~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~ 121 (305)
T 3dr2_A 57 RTLVWSDLVGRRVLGWREDGT-V-------------DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLL 121 (305)
T ss_dssp TEEEEEETTTTEEEEEETTSC-E-------------EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred CEEEEEECCCCEEEEEeCCCC-E-------------EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEE
Confidence 347888888999999987422 0 0001111 12 6899999998 665566789999975 432111
Q ss_pred cc--cee-eeeeeeeeeecCCceEE-----eeC-------------CCeEEEEEcCCCceeeeEeeCcccceEEEEEeCC
Q 021744 103 NN--RAV-IKTDILCRNWVQGNCMY-----GEK-------------CKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSG 161 (308)
Q Consensus 103 ~~--~~~-~~~~~~~~~~~~~~~~~-----g~~-------------d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~ 161 (308)
.. ... ...+..+.+.++|.... |.. .+.|..+|..++ +... +. .......++|+|+
T Consensus 122 ~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g-~~~~-~~-~~~~p~gl~~spd 198 (305)
T 3dr2_A 122 VGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGS-PLQR-MA-DLDHPNGLAFSPD 198 (305)
T ss_dssp ECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSC-CCEE-EE-EESSEEEEEECTT
T ss_pred EeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCC-cEEE-Ee-cCCCCcceEEcCC
Confidence 00 011 11255678888887744 332 356888888666 3322 22 4456788999999
Q ss_pred CCEEEEeeCC------CcEEEEeCCCCeEE--EEEe--CCCee--EEEEcCCCEEEEEcCCcEEEEEcCCCceeeeeCCC
Q 021744 162 SDKLYSGSKD------ETVRVWDCASGQCA--GVIN--LGGEV--GCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPV 229 (308)
Q Consensus 162 ~~~l~s~s~d------g~v~~wd~~~~~~~--~~~~--~~~~v--~~~~~~~~~l~~~~d~~i~~wd~~~~~~~~~~~~~ 229 (308)
++.|+.+... +.|.+|++..+... ..+. ..... ..+.+++++.++. .+.|.+||........+..+.
T Consensus 199 g~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~gv~~~~~~g~~~~~~~~~~ 277 (305)
T 3dr2_A 199 EQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GTGVCVFDSDGQLLGHIPTPG 277 (305)
T ss_dssp SSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SSEEEEECTTSCEEEEEECSS
T ss_pred CCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CCcEEEECCCCCEEEEEECCC
Confidence 9987776655 78999998765411 1121 11111 2334677755444 445999998544333555444
Q ss_pred CCEEEEEEeCC--EEEEEcCCC
Q 021744 230 GQVYAMAVGND--LLFAGTQDG 249 (308)
Q Consensus 230 ~~v~~~~~~~~--~l~~g~~dg 249 (308)
.+.+++|.++ .|..++.++
T Consensus 278 -~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 278 -TASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp -CCCEEEECTTSCEEEEEETTE
T ss_pred -ceeEEEEeCCCCEEEEEcCCe
Confidence 5888999887 666666553
No 231
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.95 E-value=4.8e-07 Score=75.93 Aligned_cols=197 Identities=12% Similarity=-0.011 Sum_probs=121.8
Q ss_pred CCCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc-eeEEecCCCe-eeccCCCcEEEEECCCCCCcc
Q 021744 24 GGGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA-AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSN 101 (308)
Q Consensus 24 ~~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~-~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~ 101 (308)
+.+.++++...++.|..|+...+... . ...+ ... +++++|+|.+ ++ ..+ .|.+||.++++...
T Consensus 59 ~~~~l~~~d~~~~~i~~~d~~~~~~~-----~--~~~~------~~v~~i~~~~dg~l~v~-~~~-gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 59 ASGTAWWFNILERELHELHLASGRKT-----V--HALP------FMGSALAKISDSKQLIA-SDD-GLFLRDTATGVLTL 123 (326)
T ss_dssp TTTEEEEEEGGGTEEEEEETTTTEEE-----E--EECS------SCEEEEEEEETTEEEEE-ETT-EEEEEETTTCCEEE
T ss_pred CCCEEEEEECCCCEEEEEECCCCcEE-----E--EECC------CcceEEEEeCCCeEEEE-ECC-CEEEEECCCCcEEE
Confidence 44678888888999999998765110 0 0000 112 6889999988 54 334 49999987765321
Q ss_pred cccc---eeeeeeeeeeeecCCceEEeeC-------CCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEE-EeeC
Q 021744 102 INNR---AVIKTDILCRNWVQGNCMYGEK-------CKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLY-SGSK 170 (308)
Q Consensus 102 ~~~~---~~~~~~~~~~~~~~~~~~~g~~-------d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~ 170 (308)
.... .....+..+.+.++|.+..+.. .+.|..++ ++ +. ..+..+......++|+|+++.++ +.+.
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g-~~-~~~~~~~~~~~~i~~s~dg~~lyv~~~~ 199 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KG-KV-TKLFADISIPNSICFSPDGTTGYFVDTK 199 (326)
T ss_dssp EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TT-EE-EEEEEEESSEEEEEECTTSCEEEEEETT
T ss_pred EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CC-cE-EEeeCCCcccCCeEEcCCCCEEEEEECC
Confidence 1110 1112467788889998744432 24566666 44 33 23333445677999999998764 4456
Q ss_pred CCcEEEEeCC--CC-eE-----EEEEe-CCCeeEEE--EcCCCEEEEEc-CCcEEEEEcCCCcee-eeeCCCCCEEEEEE
Q 021744 171 DETVRVWDCA--SG-QC-----AGVIN-LGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTNTDL-SLSGPVGQVYAMAV 237 (308)
Q Consensus 171 dg~v~~wd~~--~~-~~-----~~~~~-~~~~v~~~--~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~~~~~v~~~~~ 237 (308)
++.|.+||+. ++ +. ...+. .......+ .+++.+.++.. ++.|..||.. ++.. .+..+...+.+++|
T Consensus 200 ~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g~~~~~i~~~~~~~~~~af 278 (326)
T 2ghs_A 200 VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GNHIARYEVPGKQTTCPAF 278 (326)
T ss_dssp TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT-CCEEEEEECSCSBEEEEEE
T ss_pred CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC-CCEEEEEECCCCCcEEEEE
Confidence 7899999986 55 32 11121 12333333 35677666654 6789999984 5544 56666667999999
Q ss_pred e-CC
Q 021744 238 G-ND 240 (308)
Q Consensus 238 ~-~~ 240 (308)
+ ++
T Consensus 279 ~g~d 282 (326)
T 2ghs_A 279 IGPD 282 (326)
T ss_dssp ESTT
T ss_pred ecCC
Confidence 8 76
No 232
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.91 E-value=1.9e-06 Score=69.53 Aligned_cols=180 Identities=8% Similarity=-0.075 Sum_probs=121.9
Q ss_pred eeeeeecCCce-EEeeC--CCeEEEEEcCCCceeeeEeeCcc-cceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEE
Q 021744 112 ILCRNWVQGNC-MYGEK--CKFLHSWTVGDGFKLLTQLEGHQ-KVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGV 187 (308)
Q Consensus 112 ~~~~~~~~~~~-~~g~~--d~~i~iwd~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~ 187 (308)
.-+.+.+++.. ++.+. ++.|+++|+.++ +.+..+.-.. .....+++.. +...++.-.++.+.++|..+.+.+.+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg-~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t~~v~~~ 101 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYGRSSVRQVALQTG-KVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIYDRRTLSNIKN 101 (266)
T ss_dssp EEEEECSTTEEEEEECSTTTCEEEEEETTTC-CEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEEETTTTEEEEE
T ss_pred ccEEEeCCCeEEEECCCCCCCEEEEEECCCC-CEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEEECCCCcEEEE
Confidence 45677777655 44333 689999999999 6777665211 2223556653 23345555688999999999999999
Q ss_pred EeCC-CeeEEEEcCCCEEEEEc-CCcEEEEEcCCCcee-eeeC--C---CCCEEEEEEeCC-EEEEEcCCCeEEEEEcCC
Q 021744 188 INLG-GEVGCMISEGPWIFIGV-TNFVKAWNTQTNTDL-SLSG--P---VGQVYAMAVGND-LLFAGTQDGAILAWKFNV 258 (308)
Q Consensus 188 ~~~~-~~v~~~~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~--~---~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~ 258 (308)
+..+ ..-..+.++++.++++. ++.|.++|..+.+.. .+.- . -..++.+.+... .++....++.|.+.|..+
T Consensus 102 i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~t 181 (266)
T 2iwa_A 102 FTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKD 181 (266)
T ss_dssp EECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTT
T ss_pred EECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCC
Confidence 9865 44456778888777665 789999999998766 3331 1 124678888844 455555688999999999
Q ss_pred CCcccccceecccc-------------CCCeEE-EEecCCCeEEEee--ceEEEE
Q 021744 259 TTNCFEPAASLKVH-------------TDSNRA-HFSRDVTSLLGSV--SFIMFI 297 (308)
Q Consensus 259 ~~~~~~~~~~~~~~-------------~~~v~~-~~s~d~~~l~~s~--s~~i~~ 297 (308)
+ +.+..+... ....+. +|+|+++.+++++ ...++.
T Consensus 182 g----~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~ 232 (266)
T 2iwa_A 182 G----TLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFE 232 (266)
T ss_dssp C----CEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEE
T ss_pred C----cEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEE
Confidence 7 445544321 124466 9999998887666 444444
No 233
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.91 E-value=1.4e-07 Score=79.82 Aligned_cols=217 Identities=10% Similarity=0.064 Sum_probs=131.0
Q ss_pred eeEEecCCCe-eecc--CCCcEEEEECCCCCCccc-----ccceeeeeeeeeeeecCCce-EEeeC-----CCeEEEEEc
Q 021744 71 AKRFANNTWG-RNNN--FNNHSNNYRAGNSKNSNI-----NNRAVIKTDILCRNWVQGNC-MYGEK-----CKFLHSWTV 136 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~--~d~~i~vwd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~g~~-----d~~i~iwd~ 136 (308)
.++++|+|+. ++.. .++.++||.+.+++...- ....+...+..+.+.+++.+ ++... +..|.+||+
T Consensus 21 ~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~ 100 (343)
T 2qe8_A 21 NITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDT 100 (343)
T ss_dssp EEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEET
T ss_pred eEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEEC
Confidence 6899999998 6643 234366676653332100 11122334778888888876 43322 578999999
Q ss_pred CCCceeeeEeeCc------ccceEEEEEeCCCCEE-EEee---CCCcEEEEeCCCCeEEEEEeC-C------------C-
Q 021744 137 GDGFKLLTQLEGH------QKVVSGITLPSGSDKL-YSGS---KDETVRVWDCASGQCAGVINL-G------------G- 192 (308)
Q Consensus 137 ~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l-~s~s---~dg~v~~wd~~~~~~~~~~~~-~------------~- 192 (308)
.++ +.++.+... ...+..+++++++..+ ++-. .++.|.+||+.+++....+.. . +
T Consensus 101 ~tg-~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~ 179 (343)
T 2qe8_A 101 LNN-QLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGV 179 (343)
T ss_dssp TTT-EEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTE
T ss_pred CCC-eEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCE
Confidence 988 655555432 2356899999865454 5555 678999999998876655421 0 0
Q ss_pred ----------------eeE--EEEcCCCEEEEEc-CC-cEEEEEcC---CCc-----e---eeeeCCCCCEEEEEEeCC-
Q 021744 193 ----------------EVG--CMISEGPWIFIGV-TN-FVKAWNTQ---TNT-----D---LSLSGPVGQVYAMAVGND- 240 (308)
Q Consensus 193 ----------------~v~--~~~~~~~~l~~~~-d~-~i~~wd~~---~~~-----~---~~~~~~~~~v~~~~~~~~- 240 (308)
... ++.++++.|+.+. .+ .+..++.. .+. . +...++......++++++
T Consensus 180 ~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G 259 (343)
T 2qe8_A 180 PVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDH 259 (343)
T ss_dssp ECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTC
T ss_pred EEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCC
Confidence 012 2346777777654 33 55555532 111 0 011233345667899988
Q ss_pred -EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee
Q 021744 241 -LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV 291 (308)
Q Consensus 241 -~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~ 291 (308)
++++...++.|.+||..+++ ...+... .+...... +|.+++.+++++.
T Consensus 260 ~l~va~~~~~~V~~~d~~~G~--~~~~~~~-~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 260 NIYVGDLAHSAIGVITSADRA--YKLLVTD-EKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp CEEEEEGGGTEEEEEETTTTE--EEEEEEC-GGGSCEEEEEECTTSCEEEEEC
T ss_pred CEEEEccCCCeEEEEECCCCC--EEEEEEC-CceecCCeeEECCCCcEEEEeC
Confidence 77778888999999984442 1222211 12345666 9999988777654
No 234
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.87 E-value=1.2e-06 Score=70.09 Aligned_cols=173 Identities=13% Similarity=0.081 Sum_probs=117.9
Q ss_pred eeeeeecCCce-EEeeCCC--eEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEE-EeeCCCcEEEEeCCCCeEEEE
Q 021744 112 ILCRNWVQGNC-MYGEKCK--FLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLY-SGSKDETVRVWDCASGQCAGV 187 (308)
Q Consensus 112 ~~~~~~~~~~~-~~g~~d~--~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~dg~v~~wd~~~~~~~~~ 187 (308)
.-+.|. ++.+ .+.+.+| .|+++|++++ +.+..+.-. .......+.+++..|. ..-.++.+.++|.++.+.+.+
T Consensus 46 qGL~~~-~~~LyestG~~g~S~v~~vD~~Tg-kv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~t 122 (262)
T 3nol_A 46 EGFFYR-NGYFYESTGLNGRSSIRKVDIESG-KTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRS 122 (262)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEECTTTC-CEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred ceEEEE-CCEEEEECCCCCCceEEEEECCCC-cEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEE
Confidence 455666 5544 6666655 8999999999 677776543 3333332333344554 444588999999999999999
Q ss_pred EeCCCeeEEEEcCCCEEEEEc-CCcEEEEEcCCCcee-eeeC--CC---CCEEEEEEeCC-EEEEEcCCCeEEEEEcCCC
Q 021744 188 INLGGEVGCMISEGPWIFIGV-TNFVKAWNTQTNTDL-SLSG--PV---GQVYAMAVGND-LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 188 ~~~~~~v~~~~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~--~~---~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~ 259 (308)
+..+..-..++++++.|+.+. ++.|.++|..+.+.. ++.- .. ..++.+.+... +++..-.++.|.+.|..++
T Consensus 123 i~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG 202 (262)
T 3nol_A 123 FNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPETG 202 (262)
T ss_dssp EECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTTC
T ss_pred EECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEECCCC
Confidence 996665556678888777665 778999999998876 3322 11 34566777755 5555556889999999987
Q ss_pred Ccccccceeccc------------cCCCeEE-EEecCCCeEEEee
Q 021744 260 TNCFEPAASLKV------------HTDSNRA-HFSRDVTSLLGSV 291 (308)
Q Consensus 260 ~~~~~~~~~~~~------------~~~~v~~-~~s~d~~~l~~s~ 291 (308)
+.+..+.. .....+. +|+|+++.|++++
T Consensus 203 ----~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 203 ----KVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp ----BEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred ----cEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 44433321 1234566 9999988888776
No 235
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.85 E-value=8.3e-08 Score=81.66 Aligned_cols=238 Identities=9% Similarity=-0.045 Sum_probs=139.2
Q ss_pred CCCCceEEecCCC----eEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCe-eecc----------CCCc
Q 021744 24 GGGGLSTADTRQK----VCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWG-RNNN----------FNNH 88 (308)
Q Consensus 24 ~~~~~~~s~s~d~----~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~-~s~~----------~d~~ 88 (308)
.....+++...++ +|.+.|..+. ........|... .+.++||++. +.+. .+++
T Consensus 30 ~~~~~yV~~~~~~~~~d~vsvID~~t~-----------~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~ 97 (368)
T 1mda_H 30 ISRRSHITLPAYFAGTTENWVSCAGCG-----------VTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDY 97 (368)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTT-----------EEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEE
T ss_pred CCCeEEEECCccCCccceEEEEECCCC-----------eEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCE
Confidence 4455677777666 8889998876 111111122222 4899999998 4443 4788
Q ss_pred EEEEECCCCCCcccccce--e----eeeeeeeeeecCCce-EEeeC--CCeEEE--EEcCCCceeeeE------eeCc--
Q 021744 89 SNNYRAGNSKNSNINNRA--V----IKTDILCRNWVQGNC-MYGEK--CKFLHS--WTVGDGFKLLTQ------LEGH-- 149 (308)
Q Consensus 89 i~vwd~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~-~~g~~--d~~i~i--wd~~~~~~~~~~------~~~h-- 149 (308)
|.+||+.+.+.......+ . ......+.++|+|.. +.+.. +..+.+ +|+.+- ..+.. ...+
T Consensus 98 VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv-~~i~v~~~~~~~p~g~~ 176 (368)
T 1mda_H 98 VEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDD-QLTKSASCFHIHPGAAA 176 (368)
T ss_dssp EEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEE-EEEECSSCCCCEEEETT
T ss_pred EEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhc-eEEECCCceEEccCCCe
Confidence 999999988765432211 0 123667889999976 33332 467888 887551 11100 0000
Q ss_pred -------ccceEEEEE--------------------------eCCCCEEEEeeCCCcEEEEeCCCC--eEEEEEeC----
Q 021744 150 -------QKVVSGITL--------------------------PSGSDKLYSGSKDETVRVWDCASG--QCAGVINL---- 190 (308)
Q Consensus 150 -------~~~v~~~~~--------------------------~~~~~~l~s~s~dg~v~~wd~~~~--~~~~~~~~---- 190 (308)
.+.+..+.. .+++..++..+. +.|.+.|+.+. +.+..+..
T Consensus 177 ~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~ 255 (368)
T 1mda_H 177 THYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESG 255 (368)
T ss_dssp EEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTH
T ss_pred EEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecccc
Confidence 000000110 333344444444 67777777543 22222211
Q ss_pred ---------CCeeEEEEcCCCEEEEE-c-C--------CcEEEEEcCCCcee-eeeCCCCCEEEEEEeCC---EEEEEc-
Q 021744 191 ---------GGEVGCMISEGPWIFIG-V-T--------NFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND---LLFAGT- 246 (308)
Q Consensus 191 ---------~~~v~~~~~~~~~l~~~-~-d--------~~i~~wd~~~~~~~-~~~~~~~~v~~~~~~~~---~l~~g~- 246 (308)
......+.++++.++++ . . +.+.++|+.+.+.+ ++... .....|+|+|| .+++..
T Consensus 256 ~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg-~~p~gi~~s~Dg~~l~va~~~ 334 (368)
T 1mda_H 256 RKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG-HDSDAIIAAQDGASDNYANSA 334 (368)
T ss_dssp HHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE-EEECEEEECCSSSCEEEEEET
T ss_pred ccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC-CCcceEEECCCCCEEEEEccC
Confidence 11113567888877754 2 2 35679999999877 44322 26889999998 556666
Q ss_pred CCCeEEEEEcCCCCcccccceeccccCCCeEEEE
Q 021744 247 QDGAILAWKFNVTTNCFEPAASLKVHTDSNRAHF 280 (308)
Q Consensus 247 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 280 (308)
.++.|.++|+.+. +.+.++.....+-..++
T Consensus 335 ~~~~VsVID~~t~----kvv~~I~vg~~P~~i~~ 364 (368)
T 1mda_H 335 GTEVLDIYDAASD----QDQSSVELDKGPESLSV 364 (368)
T ss_dssp TTTEEEEEESSSC----EEEEECCCCSCCCEEEC
T ss_pred CCCeEEEEECCCC----cEEEEEECCCCCCEEEe
Confidence 5899999999997 77777775554443333
No 236
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.84 E-value=2.2e-07 Score=82.77 Aligned_cols=214 Identities=11% Similarity=0.002 Sum_probs=139.3
Q ss_pred cCCCe--eeccCCCcEEEEECCCCCCcccccceeeeeeeeeee-e-cCCceEEe-------------------eCCCeEE
Q 021744 76 NNTWG--RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRN-W-VQGNCMYG-------------------EKCKFLH 132 (308)
Q Consensus 76 ~~g~~--~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~g-------------------~~d~~i~ 132 (308)
+||++ ++...+..|.+.|+++.+...............+.+ . |++.++.. -.++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 48888 666667789999998876443222111122333443 2 66655322 2356899
Q ss_pred EEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCC--------------------------------------cE
Q 021744 133 SWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDE--------------------------------------TV 174 (308)
Q Consensus 133 iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg--------------------------------------~v 174 (308)
+.|..+. +...++.--. ....++++|+++++++.+.+. .|
T Consensus 179 vID~~t~-~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 179 AVDADKW-EVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEETTTT-EEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEECCCC-eEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 9999988 6776665222 456788999999998887553 47
Q ss_pred EEEeCCC--CeE-EEEEeC--CCeeEEEEcCCCEEEEEc--CCcEEEEEcCCCc------------eeeeeCCCCCEEEE
Q 021744 175 RVWDCAS--GQC-AGVINL--GGEVGCMISEGPWIFIGV--TNFVKAWNTQTNT------------DLSLSGPVGQVYAM 235 (308)
Q Consensus 175 ~~wd~~~--~~~-~~~~~~--~~~v~~~~~~~~~l~~~~--d~~i~~wd~~~~~------------~~~~~~~~~~v~~~ 235 (308)
.+.|.++ ++. +..+.. ...-..++|||++++++. +.+|.++|+.+.+ ......-......+
T Consensus 257 ~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~ 336 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHT 336 (595)
T ss_dssp EEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEE
T ss_pred EEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceE
Confidence 7778777 444 455552 222334578999998765 8899999999753 12111223467889
Q ss_pred EEeCC--EEEEEcCCCeEEEEEcCCCC------cccccceeccccCCCe-----EE-EEecCCCeEEEee
Q 021744 236 AVGND--LLFAGTQDGAILAWKFNVTT------NCFEPAASLKVHTDSN-----RA-HFSRDVTSLLGSV 291 (308)
Q Consensus 236 ~~~~~--~l~~g~~dg~i~iwd~~~~~------~~~~~~~~~~~~~~~v-----~~-~~s~d~~~l~~s~ 291 (308)
+|+|+ ...+.-.|+.|.+||+.... ...+.+.++..|-.+- .. .++|||++|+++.
T Consensus 337 aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 337 AFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp EECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred EECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcC
Confidence 99999 55567789999999987621 1125566666554432 22 5689999999877
No 237
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.81 E-value=1e-06 Score=70.55 Aligned_cols=172 Identities=5% Similarity=-0.105 Sum_probs=118.3
Q ss_pred eeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCcccceE--EEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe
Q 021744 112 ILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVS--GITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN 189 (308)
Q Consensus 112 ~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~--~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~ 189 (308)
.-+.|...-.+++.+.+|.|+++|++++ +.+..+. ..... .+++..+ +..+..-.++.+.++|.++.+.+.++.
T Consensus 58 qGL~~~~~~Ly~stG~~g~v~~iD~~Tg-kv~~~~l--~~~~FgeGit~~g~-~Ly~ltw~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQGTLRQLSLESA-QPVWMER--LGNIFAEGLASDGE-RLYQLTWTEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp EEEEEETTEEEEEETTTTEEEECCSSCS-SCSEEEE--CTTCCEEEEEECSS-CEEEEESSSCEEEEEETTTTEEEEEEE
T ss_pred ceEEEECCEEEEEcCCCCEEEEEECCCC-cEEeEEC--CCCcceeEEEEeCC-EEEEEEccCCEEEEEECCcCcEEEEEe
Confidence 3455553223377888899999999999 5666552 22333 3555432 344455578999999999999999999
Q ss_pred CCCeeEEEEcCCCEEEEEc-CCcEEEEEcCCCcee-eee--CCC---CCEEEEEEeCC-EEEEEcCCCeEEEEEcCCCCc
Q 021744 190 LGGEVGCMISEGPWIFIGV-TNFVKAWNTQTNTDL-SLS--GPV---GQVYAMAVGND-LLFAGTQDGAILAWKFNVTTN 261 (308)
Q Consensus 190 ~~~~v~~~~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~--~~~---~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~ 261 (308)
....-..++++++.|+++. ++.|.++|..+.+.. ++. .+. ..++.+.+... +++..-.++.|.+.|..++
T Consensus 134 ~~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG-- 211 (268)
T 3nok_A 134 YSGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPATG-- 211 (268)
T ss_dssp CSSCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTC--
T ss_pred CCCceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCCC--
Confidence 6655566778888888766 889999999998876 332 222 24577788755 5555556889999999987
Q ss_pred ccccceeccc-------------cCCCeEE-EEecCCCeEEEee
Q 021744 262 CFEPAASLKV-------------HTDSNRA-HFSRDVTSLLGSV 291 (308)
Q Consensus 262 ~~~~~~~~~~-------------~~~~v~~-~~s~d~~~l~~s~ 291 (308)
+.+..+.. .....+. +|+|+++.|++++
T Consensus 212 --~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 212 --TVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp --BEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred --cEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 44433321 1235566 9999888777665
No 238
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.80 E-value=7.7e-07 Score=71.19 Aligned_cols=170 Identities=13% Similarity=0.050 Sum_probs=111.7
Q ss_pred eeEEecCCCe-eeccCCC--cEEEEECCCCCCcccccceeeeeeeeeeeecCC-ce-EEeeCCCeEEEEEcCCCceeeeE
Q 021744 71 AKRFANNTWG-RNNNFNN--HSNNYRAGNSKNSNINNRAVIKTDILCRNWVQG-NC-MYGEKCKFLHSWTVGDGFKLLTQ 145 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~g~~d~~i~iwd~~~~~~~~~~ 145 (308)
.+.|+ ++.. .+.+.++ .|+++|+++++.+..... ..........+.+ .. +..-.++.+.+||..+. +.+.+
T Consensus 47 GL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l--~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~-~~~~t 122 (262)
T 3nol_A 47 GFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL--GKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNL-RQVRS 122 (262)
T ss_dssp EEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC--CTTCCEEEEEEETTEEEEEESSSSEEEEEETTTC-CEEEE
T ss_pred eEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEec--CCccceeEEEEeCCEEEEEEeeCCEEEEEECccC-cEEEE
Confidence 57888 6656 7777665 899999999876533221 1122222222233 33 55557899999999998 77888
Q ss_pred eeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEeC---CCee---EEE-EcCCCEEEEEc-CCcEEEEEc
Q 021744 146 LEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINL---GGEV---GCM-ISEGPWIFIGV-TNFVKAWNT 217 (308)
Q Consensus 146 ~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~---~~~v---~~~-~~~~~~l~~~~-d~~i~~wd~ 217 (308)
+.-.. ....+.+++..|+....++.|.++|.++.+.+..+.. ..++ ..+ +.++++.+... ++.|.+.|.
T Consensus 123 i~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp 199 (262)
T 3nol_A 123 FNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDP 199 (262)
T ss_dssp EECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECT
T ss_pred EECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEEC
Confidence 77422 2233445677777666688899999999999988873 2232 222 45776555444 789999999
Q ss_pred CCCcee-eeeCC------------CCCEEEEEEeCC---EEEEEcC
Q 021744 218 QTNTDL-SLSGP------------VGQVYAMAVGND---LLFAGTQ 247 (308)
Q Consensus 218 ~~~~~~-~~~~~------------~~~v~~~~~~~~---~l~~g~~ 247 (308)
++++.. .+... .+..+.|+++|+ ++++|-.
T Consensus 200 ~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 200 ETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp TTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred CCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 999876 33221 235699999997 5555543
No 239
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.78 E-value=2.4e-06 Score=74.03 Aligned_cols=179 Identities=7% Similarity=-0.056 Sum_probs=117.2
Q ss_pred cCCCe--eeccCC----CcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEee----------CCCeEEEEEcCC
Q 021744 76 NNTWG--RNNNFN----NHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGE----------KCKFLHSWTVGD 138 (308)
Q Consensus 76 ~~g~~--~s~~~d----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~----------~d~~i~iwd~~~ 138 (308)
|++.. ++...+ ++|.+.|..+.+.+.....+ ... .+.++|++.. +.+. .++.|.++|..+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG--~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGG--FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC--SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECC--CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 45554 444433 79999999888765332222 224 7889999965 2222 467999999999
Q ss_pred CceeeeEeeCc-------ccceEEEEEeCCCCEEEEeeC--CCcEEEEeCCCCeEEEEEeCCCeeEEEEcCC-CE-EEEE
Q 021744 139 GFKLLTQLEGH-------QKVVSGITLPSGSDKLYSGSK--DETVRVWDCASGQCAGVINLGGEVGCMISEG-PW-IFIG 207 (308)
Q Consensus 139 ~~~~~~~~~~h-------~~~v~~~~~~~~~~~l~s~s~--dg~v~~wd~~~~~~~~~~~~~~~v~~~~~~~-~~-l~~~ 207 (308)
. +.+..+.-- ......++++||+++++.+.. +++|.+.|+.+.+.+..+..... ..+.+++ +. ++.+
T Consensus 159 ~-~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~-~~~~p~g~~~~v~~~ 236 (426)
T 3c75_H 159 F-LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC-YHIFPASPTVFYMNC 236 (426)
T ss_dssp C-CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-EEEEEEETTEEEEEE
T ss_pred C-cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc-eeeccCCCcEEEEEc
Confidence 8 677666421 124567899999999988774 57899999999999999886553 2234433 33 3345
Q ss_pred cCCcEEEEEcCCCceee-----eeCCCCCE-EEEEEeCC--EEEEEcCCCeEEEEEcCCC
Q 021744 208 VTNFVKAWNTQTNTDLS-----LSGPVGQV-YAMAVGND--LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 208 ~d~~i~~wd~~~~~~~~-----~~~~~~~v-~~~~~~~~--~l~~g~~dg~i~iwd~~~~ 259 (308)
.||.+.+.++.+++... +.....++ ..+.+.++ .++..+..+.|.+.|....
T Consensus 237 ~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~ 296 (426)
T 3c75_H 237 RDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAE 296 (426)
T ss_dssp TTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSS
T ss_pred CCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCC
Confidence 58888888886555441 11111111 23456776 5555567889999998754
No 240
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.76 E-value=1.6e-06 Score=69.40 Aligned_cols=169 Identities=10% Similarity=0.026 Sum_probs=114.6
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeee--eeeecCCceEEeeCCCeEEEEEcCCCceeeeEee
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDIL--CRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLE 147 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~ 147 (308)
.+.|+. +.. ++.+.++.|+++|+++++.+... ....... +.+..+..++..-.++.+.+||.++. +.+.++.
T Consensus 59 GL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~---l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl-~~~~ti~ 133 (268)
T 3nok_A 59 GLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME---RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPP-QRERTTR 133 (268)
T ss_dssp EEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE---ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTT-EEEEEEE
T ss_pred eEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE---CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcC-cEEEEEe
Confidence 467763 444 88888889999999999876543 2222222 33333323355667999999999999 7888887
Q ss_pred CcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEeC---CCee---EEE-EcCCCEEEEEc-CCcEEEEEcCC
Q 021744 148 GHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINL---GGEV---GCM-ISEGPWIFIGV-TNFVKAWNTQT 219 (308)
Q Consensus 148 ~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~---~~~v---~~~-~~~~~~l~~~~-d~~i~~wd~~~ 219 (308)
-. ..-..++ +++..|+.+..++.|.++|.++.+.+..+.. ..++ ..+ +.++++.+... ++.|.+.|.++
T Consensus 134 ~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~T 210 (268)
T 3nok_A 134 YS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPAT 210 (268)
T ss_dssp CS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTT
T ss_pred CC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCC
Confidence 42 2224444 4577777777789999999999999988873 2222 222 45776555443 77999999999
Q ss_pred Ccee-eeeC-------------CCCCEEEEEEeCC---EEEEEcC
Q 021744 220 NTDL-SLSG-------------PVGQVYAMAVGND---LLFAGTQ 247 (308)
Q Consensus 220 ~~~~-~~~~-------------~~~~v~~~~~~~~---~l~~g~~ 247 (308)
++.. .+.. ..+..+.|+++|+ ++++|-.
T Consensus 211 G~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 211 GTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL 255 (268)
T ss_dssp CBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred CcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC
Confidence 9876 3221 1246799999987 6676643
No 241
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.76 E-value=1.8e-06 Score=74.33 Aligned_cols=218 Identities=8% Similarity=0.028 Sum_probs=132.0
Q ss_pred CCCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCC---ccccccc-eeEEecCCCe-eeccCC------CcEEEE
Q 021744 24 GGGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPA---ATANGAA-AKRFANNTWG-RNNNFN------NHSNNY 92 (308)
Q Consensus 24 ~~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~---~~gh~~~-~i~~s~~g~~-~s~~~d------~~i~vw 92 (308)
+...+++++..+..|.+.|..+..+. |.++.... +.. ..|.... .+.++|+| . +++..+ +.|.+.
T Consensus 94 ~r~~l~v~~l~s~~I~viD~~t~p~~--p~~~k~ie-~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 94 ERRFLIVPGLRSSRIYIIDTKPNPRE--PKIIKVIE-PEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILML 169 (462)
T ss_dssp CSCEEEEEBTTTCCEEEEECCSCTTS--CEEEEEEC-HHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEE
T ss_pred cCCEEEEccCCCCeEEEEECCCCCCC--ceeeeeec-hhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEE
Confidence 34567788888999999998765322 11221110 000 0121122 57888999 6 555544 789999
Q ss_pred ECCCCCCcccccceeeee--eeeeeeecCCceEEee--------------------CCCeEEEEEcCCCceeeeEeeCc-
Q 021744 93 RAGNSKNSNINNRAVIKT--DILCRNWVQGNCMYGE--------------------KCKFLHSWTVGDGFKLLTQLEGH- 149 (308)
Q Consensus 93 d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~--------------------~d~~i~iwd~~~~~~~~~~~~~h- 149 (308)
|.++.+.+.......... ...+.++|+++.+..+ .+..|.+||+.++ +.+.++.-.
T Consensus 170 D~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~-k~~~tI~vg~ 248 (462)
T 2ece_A 170 DHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR-KRIHSLTLGE 248 (462)
T ss_dssp CTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT-EEEEEEESCT
T ss_pred ECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC-cEeeEEecCC
Confidence 998887665443221111 2336668888764433 3789999999987 777777642
Q ss_pred -ccceEEEEE--eCCCCEEEEee------CCCcEEEEeCCCCeE--EEEEe--C-----------------CCeeE--EE
Q 021744 150 -QKVVSGITL--PSGSDKLYSGS------KDETVRVWDCASGQC--AGVIN--L-----------------GGEVG--CM 197 (308)
Q Consensus 150 -~~~v~~~~~--~~~~~~l~s~s------~dg~v~~wd~~~~~~--~~~~~--~-----------------~~~v~--~~ 197 (308)
......+.| +|++++++.+. .+++|.+|....++. ++.+. . ..... .+
T Consensus 249 ~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~l 328 (462)
T 2ece_A 249 ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDI 328 (462)
T ss_dssp TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEE
T ss_pred CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEE
Confidence 134456655 99999886665 566888776654432 22221 0 01112 24
Q ss_pred EcCCCEEEEEc--CCcEEEEEcCCC---cee-eeeCC--------------CCCEEEEEEeCC--EEEEEc
Q 021744 198 ISEGPWIFIGV--TNFVKAWNTQTN---TDL-SLSGP--------------VGQVYAMAVGND--LLFAGT 246 (308)
Q Consensus 198 ~~~~~~l~~~~--d~~i~~wd~~~~---~~~-~~~~~--------------~~~v~~~~~~~~--~l~~g~ 246 (308)
++++++|.++. .+.|.+||+... +.+ .+... ......+.++|| +|+++.
T Consensus 329 S~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 329 SLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 68999999776 779999998632 222 22211 013578999999 666666
No 242
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.75 E-value=1e-05 Score=64.13 Aligned_cols=174 Identities=13% Similarity=0.053 Sum_probs=117.0
Q ss_pred eeeeeeecCCce-EEeeCC--CeEEEEEcCCCceeeeEeeCcccc-eEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEE
Q 021744 111 DILCRNWVQGNC-MYGEKC--KFLHSWTVGDGFKLLTQLEGHQKV-VSGITLPSGSDKLYSGSKDETVRVWDCASGQCAG 186 (308)
Q Consensus 111 ~~~~~~~~~~~~-~~g~~d--~~i~iwd~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~ 186 (308)
..-+.|.. +.. .+.+.+ ..|+.+|+.++ +.+..+.-.... -..+++.. ++.....-.++.+.++|.++.+.+.
T Consensus 23 tqGL~~~~-~~LyestG~~g~S~v~~vD~~tg-kv~~~~~l~~~~fgeGi~~~~-~~ly~ltw~~~~v~v~D~~tl~~~~ 99 (243)
T 3mbr_X 23 TEGLFYLR-GHLYESTGETGRSSVRKVDLETG-RILQRAEVPPPYFGAGIVAWR-DRLIQLTWRNHEGFVYDLATLTPRA 99 (243)
T ss_dssp EEEEEEET-TEEEEEECCTTSCEEEEEETTTC-CEEEEEECCTTCCEEEEEEET-TEEEEEESSSSEEEEEETTTTEEEE
T ss_pred cccEEEEC-CEEEEECCCCCCceEEEEECCCC-CEEEEEeCCCCcceeEEEEeC-CEEEEEEeeCCEEEEEECCcCcEEE
Confidence 34555655 444 565654 48999999999 677766533221 12344442 3334455568999999999999999
Q ss_pred EEeCCCeeEEEEcCCCEEEEEc-CCcEEEEEcCCCcee-eeeC--CC---CCEEEEEEeCC-EEEEEcCCCeEEEEEcCC
Q 021744 187 VINLGGEVGCMISEGPWIFIGV-TNFVKAWNTQTNTDL-SLSG--PV---GQVYAMAVGND-LLFAGTQDGAILAWKFNV 258 (308)
Q Consensus 187 ~~~~~~~v~~~~~~~~~l~~~~-d~~i~~wd~~~~~~~-~~~~--~~---~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~ 258 (308)
++.....-..++++++.|+++. ++.|.++|..+.+.. ++.- +. ..++.+.+... .++..-.+..|.+.|..+
T Consensus 100 ti~~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~t 179 (243)
T 3mbr_X 100 RFRYPGEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPAS 179 (243)
T ss_dssp EEECSSCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTT
T ss_pred EEeCCCCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCC
Confidence 9996665567778877777665 789999999998876 3322 21 34567777755 455555677999999998
Q ss_pred CCcccccceecc-------------ccCCCeEE-EEecCCCeEEEee
Q 021744 259 TTNCFEPAASLK-------------VHTDSNRA-HFSRDVTSLLGSV 291 (308)
Q Consensus 259 ~~~~~~~~~~~~-------------~~~~~v~~-~~s~d~~~l~~s~ 291 (308)
+ +.+..+. ......+. +++|+++.|++++
T Consensus 180 G----~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 180 G----KVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp C----BEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred C----CEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 7 3333332 11234566 9999888887666
No 243
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.74 E-value=5.7e-06 Score=76.31 Aligned_cols=251 Identities=14% Similarity=0.072 Sum_probs=141.5
Q ss_pred CCceEEecCCCeEEEeecCCCCC-CCCCcccccCCCCCCccccccceeEEecCCCeeecc------CCCcEEEEECCCCC
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNR-FPCPYLHRELPLPPAATANGAAAKRFANNTWGRNNN------FNNHSNNYRAGNSK 98 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~-~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~~s~~------~d~~i~vwd~~~~~ 98 (308)
+..++.++.|+.|..+|+.+++. +..... ........... ..+ .++..+.+. .++.|..+|.++++
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~-----~~~~~~~~~~~-P~v-~~~~v~vg~~~~~~~~~g~v~a~D~~tG~ 189 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTT-----DPAKPYSITGA-PRV-VKGKVIIGNGGAEYGVRGFVSAYDADTGK 189 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECS-----CTTSSCBCCSC-CEE-ETTEEEECCBCTTTCCBCEEEEEETTTCC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccC-----CCCCcceecCC-CEE-ECCEEEEeCCCCCcCCCCEEEEEECCCCc
Confidence 45778888999999999988832 111100 00000000111 111 133333332 25889999998887
Q ss_pred Ccccccce------------------------------eeeeeeeeeeecCCce-EEeeCCC------------------
Q 021744 99 NSNINNRA------------------------------VIKTDILCRNWVQGNC-MYGEKCK------------------ 129 (308)
Q Consensus 99 ~~~~~~~~------------------------------~~~~~~~~~~~~~~~~-~~g~~d~------------------ 129 (308)
.+-..... .........+.+.... +.+..++
T Consensus 190 ~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~ 269 (668)
T 1kv9_A 190 LAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYL 269 (668)
T ss_dssp EEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTT
T ss_pred EEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceee
Confidence 54221100 0000112345554433 4555444
Q ss_pred -eEEEEEcCCCceeeeEeeC--cc-------cceEEEEEeCCCC---EEEEeeCCCcEEEEeCCCCeEEEEEeCCC----
Q 021744 130 -FLHSWTVGDGFKLLTQLEG--HQ-------KVVSGITLPSGSD---KLYSGSKDETVRVWDCASGQCAGVINLGG---- 192 (308)
Q Consensus 130 -~i~iwd~~~~~~~~~~~~~--h~-------~~v~~~~~~~~~~---~l~s~s~dg~v~~wd~~~~~~~~~~~~~~---- 192 (308)
.|..+|+.++ +.+..++. |. .+.....+..+++ .++.++.+|.++++|.++|+.+...+...
T Consensus 270 ~~v~AlD~~tG-~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~ 348 (668)
T 1kv9_A 270 SSILAIRPDTG-KLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWA 348 (668)
T ss_dssp TEEEEECTTTC-CEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSE
T ss_pred eeEEEEcCCCC-ceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccc
Confidence 4999999999 67666653 22 2233333334564 68999999999999999999885544211
Q ss_pred ---------ee--------------------------EEEEcCCCEEEEE------------------------------
Q 021744 193 ---------EV--------------------------GCMISEGPWIFIG------------------------------ 207 (308)
Q Consensus 193 ---------~v--------------------------~~~~~~~~~l~~~------------------------------ 207 (308)
++ .++.++..++++.
T Consensus 349 ~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 428 (668)
T 1kv9_A 349 EKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADA 428 (668)
T ss_dssp EEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGC
T ss_pred cccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCcccccc
Confidence 00 1223343444321
Q ss_pred -------cCCcEEEEEcCCCcee-eeeCCCCCE-EEEEEeCCEEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE
Q 021744 208 -------VTNFVKAWNTQTNTDL-SLSGPVGQV-YAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA 278 (308)
Q Consensus 208 -------~d~~i~~wd~~~~~~~-~~~~~~~~v-~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~ 278 (308)
.++.|..||+.+++.+ ....+.... ..+....++++.++.|+.++.||.+++ +.+..+.........
T Consensus 429 ~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG----~~l~~~~~~~~~~~~ 504 (668)
T 1kv9_A 429 TDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKG----EALWQFEAQSGIVAA 504 (668)
T ss_dssp CCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTC----CEEEEEECSSCCCSC
T ss_pred CCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcC----hhheEecCCCCcccC
Confidence 1377999999999987 333222111 223333348888999999999999998 556666544332222
Q ss_pred --EEecCCCeEE
Q 021744 279 --HFSRDVTSLL 288 (308)
Q Consensus 279 --~~s~d~~~l~ 288 (308)
.+..+|+..+
T Consensus 505 p~~~~~~G~~yv 516 (668)
T 1kv9_A 505 PMTFELAGRQYV 516 (668)
T ss_dssp CEEEEETTEEEE
T ss_pred ceEEEECCEEEE
Confidence 4556776444
No 244
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.73 E-value=2.8e-06 Score=67.29 Aligned_cols=172 Identities=9% Similarity=0.001 Sum_probs=110.9
Q ss_pred eeEEecCCCe-eeccCC--CcEEEEECCCCCCcccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEee
Q 021744 71 AKRFANNTWG-RNNNFN--NHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLE 147 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d--~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~ 147 (308)
.+.|++ +.. .+.+.+ ..|+++|+++++............-..+....+..++..-.++.+.+||..+. +.+.++.
T Consensus 25 GL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl-~~~~ti~ 102 (243)
T 3mbr_X 25 GLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATL-TPRARFR 102 (243)
T ss_dssp EEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTT-EEEEEEE
T ss_pred cEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcC-cEEEEEe
Confidence 578887 444 666665 48999999998765332111110011122222222355567899999999999 7888877
Q ss_pred CcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEeCC---Ce---eEEE-EcCCCEEEEEc-CCcEEEEEcCC
Q 021744 148 GHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLG---GE---VGCM-ISEGPWIFIGV-TNFVKAWNTQT 219 (308)
Q Consensus 148 ~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~~---~~---v~~~-~~~~~~l~~~~-d~~i~~wd~~~ 219 (308)
-. ..=..++ +++..|+.+..++.|.++|.++.+.+..+... .+ +..+ +.++++.+... +..|.+.|.++
T Consensus 103 ~~-~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~t 179 (243)
T 3mbr_X 103 YP-GEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPAS 179 (243)
T ss_dssp CS-SCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTT
T ss_pred CC-CCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCC
Confidence 43 2224444 45666666667889999999999998888732 22 2223 45676555443 77999999999
Q ss_pred Ccee-eeeC-------------CCCCEEEEEEeCC---EEEEEcC
Q 021744 220 NTDL-SLSG-------------PVGQVYAMAVGND---LLFAGTQ 247 (308)
Q Consensus 220 ~~~~-~~~~-------------~~~~v~~~~~~~~---~l~~g~~ 247 (308)
++.. .+.. ..+..+.|+++|+ ++++|-.
T Consensus 180 G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 180 GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred CCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 9876 3221 1236799999997 6666644
No 245
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.70 E-value=6.9e-06 Score=75.75 Aligned_cols=190 Identities=12% Similarity=0.069 Sum_probs=113.6
Q ss_pred CCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCcc------ccccceeEEecCCCe-eeccCCCcEEEEECCCCC
Q 021744 26 GGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAAT------ANGAAAKRFANNTWG-RNNNFNNHSNNYRAGNSK 98 (308)
Q Consensus 26 ~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~------gh~~~~i~~s~~g~~-~s~~~d~~i~vwd~~~~~ 98 (308)
+..++.++.++.|.-+|+.+++. +.+..+...... ......+++ .+.. +.++.|+.|..+|.++++
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~-----~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~ 138 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKE-----LWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGK 138 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCE-----EEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEECCCCeEEEEECCCChh-----ceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCC
Confidence 55677777889999999888732 111011000000 000012233 2345 778889999999999887
Q ss_pred Ccccccceee---eeeeeeeeecCCceEEeeC------CCeEEEEEcCCCceeeeEeeCc---c----------------
Q 021744 99 NSNINNRAVI---KTDILCRNWVQGNCMYGEK------CKFLHSWTVGDGFKLLTQLEGH---Q---------------- 150 (308)
Q Consensus 99 ~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~------d~~i~iwd~~~~~~~~~~~~~h---~---------------- 150 (308)
.+-....... ..+...-...++..+.+.. ++.|+.+|..++ +.+..+... .
T Consensus 139 ~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG-~~~W~~~~~~~~p~~~~~~~~~~~~~~~~ 217 (668)
T 1kv9_A 139 AIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTG-KLAWRFYTVPGDPALPYEHPELREAAKTW 217 (668)
T ss_dssp EEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTC-CEEEEEESSCCCTTSCCSSHHHHHHHTTC
T ss_pred EeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCC-cEEEEecccCCCCCccccccccccccccC
Confidence 5532211100 0011111112444444432 589999999999 666665421 0
Q ss_pred ------------cceEEEEEeCCCCEEEEeeCCC-------------------cEEEEeCCCCeEEEEEeCC--------
Q 021744 151 ------------KVVSGITLPSGSDKLYSGSKDE-------------------TVRVWDCASGQCAGVINLG-------- 191 (308)
Q Consensus 151 ------------~~v~~~~~~~~~~~l~s~s~dg-------------------~v~~wd~~~~~~~~~~~~~-------- 191 (308)
.....++++|+..+++.++.++ .|..+|.++++.+..++..
T Consensus 218 ~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~ 297 (668)
T 1kv9_A 218 QGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFT 297 (668)
T ss_dssp CSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCC
T ss_pred CccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCcccccc
Confidence 0112468888888888887766 3999999999999998732
Q ss_pred --CeeE--EEEcCCC---EEEEEc-CCcEEEEEcCCCcee
Q 021744 192 --GEVG--CMISEGP---WIFIGV-TNFVKAWNTQTNTDL 223 (308)
Q Consensus 192 --~~v~--~~~~~~~---~l~~~~-d~~i~~wd~~~~~~~ 223 (308)
.+.. .+..+++ .++.+. +|.++++|.++++.+
T Consensus 298 ~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 298 ATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred CCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 1111 1234665 466665 899999999999876
No 246
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.70 E-value=1.7e-05 Score=71.75 Aligned_cols=156 Identities=13% Similarity=0.123 Sum_probs=97.1
Q ss_pred CeEEEEEcCCCceeeeEeeC--cc--------cceEEEEEeCCCC---EEEEeeCCCcEEEEeCCCCeEEEEEeCCC---
Q 021744 129 KFLHSWTVGDGFKLLTQLEG--HQ--------KVVSGITLPSGSD---KLYSGSKDETVRVWDCASGQCAGVINLGG--- 192 (308)
Q Consensus 129 ~~i~iwd~~~~~~~~~~~~~--h~--------~~v~~~~~~~~~~---~l~s~s~dg~v~~wd~~~~~~~~~~~~~~--- 192 (308)
+.|..+|..++ +.+..++. |. .++ -+....+++ .++.++.+|.+.+.|.++++.+..+....
T Consensus 272 ~~v~Ald~~tG-~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~ 349 (571)
T 2ad6_A 272 MTIWGRDLDTG-MAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVN 349 (571)
T ss_dssp TEEEEEETTTC-CEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCC
T ss_pred EEEEEEecCCC-cEEEEecCCCCcccccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcc
Confidence 36999999999 66666653 21 122 122234664 57788999999999999999988776322
Q ss_pred -----------ee----------------------------EEEEcCCCEEEEE--------------------------
Q 021744 193 -----------EV----------------------------GCMISEGPWIFIG-------------------------- 207 (308)
Q Consensus 193 -----------~v----------------------------~~~~~~~~~l~~~-------------------------- 207 (308)
++ .++.++..++++.
T Consensus 350 w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~ 429 (571)
T 2ad6_A 350 VFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATL 429 (571)
T ss_dssp SEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred ccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccc
Confidence 11 1223444555442
Q ss_pred ------------cCCcEEEEEcCCCcee-eeeCCCCCEEE--EEEeCCEEEEEcCCCeEEEEEcCCCCcccccceecccc
Q 021744 208 ------------VTNFVKAWNTQTNTDL-SLSGPVGQVYA--MAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKVH 272 (308)
Q Consensus 208 ------------~d~~i~~wd~~~~~~~-~~~~~~~~v~~--~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~ 272 (308)
.++.|..||+.+++.+ +... ...+.+ +......++.++.||.|+.+|.+++ +.+.++...
T Consensus 430 ~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~-~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG----~~lw~~~~~ 504 (571)
T 2ad6_A 430 AMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDG----KELWNFKMP 504 (571)
T ss_dssp EEEECTTSTTSCCCEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTC----CEEEEEECS
T ss_pred eeccCccccCCCCCCeEEEEECCCCCEEEEecC-CCCccceeEEECCCEEEEEcCCCeEEEEECCCC----CEEEEEeCC
Confidence 1468999999999887 3332 222222 2222337777999999999999998 556555533
Q ss_pred CCCeEE--EEecCCCeEEEee
Q 021744 273 TDSNRA--HFSRDVTSLLGSV 291 (308)
Q Consensus 273 ~~~v~~--~~s~d~~~l~~s~ 291 (308)
...... .+..+|+.++++.
T Consensus 505 ~~~~~~p~~~~~~G~~yv~~~ 525 (571)
T 2ad6_A 505 SGGIGSPMTYSFKGKQYIGSM 525 (571)
T ss_dssp SCCCSCCEEEEETTEEEEEEE
T ss_pred CCcEeeeEEEEECCEEEEEEE
Confidence 322222 4567887666443
No 247
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.66 E-value=2.2e-06 Score=72.88 Aligned_cols=90 Identities=11% Similarity=-0.076 Sum_probs=66.0
Q ss_pred cEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEee----------CCCeEEEEEcCCCceeeeEeeCc-------
Q 021744 88 HSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGE----------KCKFLHSWTVGDGFKLLTQLEGH------- 149 (308)
Q Consensus 88 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~----------~d~~i~iwd~~~~~~~~~~~~~h------- 149 (308)
+|.+.|.++.+.+.....+. .. .+.++|++.. ..+. .++.|.+||+.+. +.+.++...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~--~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~-~vv~~I~v~~~~~~~~ 122 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAF--LS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF-LPIADIELPDAPRFSV 122 (368)
T ss_dssp EEEEEETTTTEEEEEEEECT--TC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC-CEEEEEEETTSCSCCB
T ss_pred eEEEEECCCCeEEEEEeCCC--CC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC-CEEEEEECCCcccccc
Confidence 78899998887664333222 23 6899999966 2222 4789999999999 778877533
Q ss_pred ccceEEEEEeCCCCEEEEeeC--CCcEEE--EeCCC
Q 021744 150 QKVVSGITLPSGSDKLYSGSK--DETVRV--WDCAS 181 (308)
Q Consensus 150 ~~~v~~~~~~~~~~~l~s~s~--dg~v~~--wd~~~ 181 (308)
......++++||+++++.+.. +..|.+ +|+.+
T Consensus 123 g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 123 GPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp SCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 124578999999999988875 467888 99876
No 248
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.65 E-value=7.3e-06 Score=69.18 Aligned_cols=180 Identities=12% Similarity=-0.054 Sum_probs=108.9
Q ss_pred eeEEecCCCe-eeccC-----CCcEEEEECCCCCCcccccc-----eeeeeeeeeeeecC-Cce-EEee---CCCeEEEE
Q 021744 71 AKRFANNTWG-RNNNF-----NNHSNNYRAGNSKNSNINNR-----AVIKTDILCRNWVQ-GNC-MYGE---KCKFLHSW 134 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~-----d~~i~vwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~-~~g~---~d~~i~iw 134 (308)
.+++.++|.+ ++-.. +..|.+||+++++....... .+......+.+.++ +.. ++.. .++.|.+|
T Consensus 71 gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~ 150 (343)
T 2qe8_A 71 GIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRV 150 (343)
T ss_dssp EEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEE
T ss_pred EEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEE
Confidence 7999999988 54433 57899999987763321111 11122466777765 444 5554 67899999
Q ss_pred EcCCCceeeeEeeCcc-----------------------------cceEEEEEeCCCCEEEEeeCCC-cEEEEeCC---C
Q 021744 135 TVGDGFKLLTQLEGHQ-----------------------------KVVSGITLPSGSDKLYSGSKDE-TVRVWDCA---S 181 (308)
Q Consensus 135 d~~~~~~~~~~~~~h~-----------------------------~~v~~~~~~~~~~~l~s~s~dg-~v~~wd~~---~ 181 (308)
|+.++ +..+.+.+|. ..+..++|+|+++.|+.+..++ .+..++.. .
T Consensus 151 d~~~g-~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~ 229 (343)
T 2qe8_A 151 DLQTG-LAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSN 229 (343)
T ss_dssp ETTTC-CEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTC
T ss_pred ECCCC-CEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcC
Confidence 99877 4554443321 2357899999999888877766 44444421 1
Q ss_pred Ce--------EEEEEeCCCe--eEEEEcCCCEEEEEc-CCcEEEEEcCCCceeeeeCC--CCCEEEEEEeCC--EEEEEc
Q 021744 182 GQ--------CAGVINLGGE--VGCMISEGPWIFIGV-TNFVKAWNTQTNTDLSLSGP--VGQVYAMAVGND--LLFAGT 246 (308)
Q Consensus 182 ~~--------~~~~~~~~~~--v~~~~~~~~~l~~~~-d~~i~~wd~~~~~~~~~~~~--~~~v~~~~~~~~--~l~~g~ 246 (308)
+. .+........ -.++.+++.++++.. ++.|.+||..+++...+... ...+.++++.++ ++++.+
T Consensus 230 ~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 230 LQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp TTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred CCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 10 0111111111 134457788777766 78999999866665433322 356889999887 555555
Q ss_pred CCCeE
Q 021744 247 QDGAI 251 (308)
Q Consensus 247 ~dg~i 251 (308)
..+.+
T Consensus 310 ~~~~~ 314 (343)
T 2qe8_A 310 QLHHS 314 (343)
T ss_dssp CGGGS
T ss_pred ccccc
Confidence 44333
No 249
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.60 E-value=6.5e-05 Score=68.11 Aligned_cols=153 Identities=17% Similarity=0.170 Sum_probs=94.0
Q ss_pred CeEEEEEcCCCceeeeEeeCcc----------cceEEEEEe-CCC---CEEEEeeCCCcEEEEeCCCCeEEEEEeCCC--
Q 021744 129 KFLHSWTVGDGFKLLTQLEGHQ----------KVVSGITLP-SGS---DKLYSGSKDETVRVWDCASGQCAGVINLGG-- 192 (308)
Q Consensus 129 ~~i~iwd~~~~~~~~~~~~~h~----------~~v~~~~~~-~~~---~~l~s~s~dg~v~~wd~~~~~~~~~~~~~~-- 192 (308)
+.|..+|++++ +.+..++... .++. +... .++ ..++.++.+|.+.+.|.++++.+.......
T Consensus 278 ~sv~Ald~~TG-~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~ 355 (599)
T 1w6s_A 278 MTIFGRDADTG-EAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTV 355 (599)
T ss_dssp SEEEEEETTTC-CEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTC
T ss_pred ceEEEEeCCCC-ceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCc
Confidence 47999999999 6666665322 1121 2222 466 467788999999999999999988776221
Q ss_pred ------------ee----------------------------EEEEcCCCEEEEE-------------------------
Q 021744 193 ------------EV----------------------------GCMISEGPWIFIG------------------------- 207 (308)
Q Consensus 193 ------------~v----------------------------~~~~~~~~~l~~~------------------------- 207 (308)
++ .++.++..++++.
T Consensus 356 ~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~ 435 (599)
T 1w6s_A 356 NVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGAT 435 (599)
T ss_dssp CSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEE
T ss_pred ccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceeccc
Confidence 10 0122222332221
Q ss_pred ---------------cCCcEEEEEcCCCcee-eeeCCCCCEE-E-EEEeCCEEEEEcCCCeEEEEEcCCCCcccccceec
Q 021744 208 ---------------VTNFVKAWNTQTNTDL-SLSGPVGQVY-A-MAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASL 269 (308)
Q Consensus 208 ---------------~d~~i~~wd~~~~~~~-~~~~~~~~v~-~-~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~ 269 (308)
..+.|..||+.+++.+ .... ..+.. . +.....+++.++.|+.++.||.+++ +.+.++
T Consensus 436 ~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG----~~lW~~ 510 (599)
T 1w6s_A 436 LNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTG----DLLWKF 510 (599)
T ss_dssp EEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTC----CEEEEE
T ss_pred ceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEECCCC----CEEEEe
Confidence 2368899999999887 3321 11221 1 3333347777999999999999998 555555
Q ss_pred cccCCCeEE--EEecCCCeEE
Q 021744 270 KVHTDSNRA--HFSRDVTSLL 288 (308)
Q Consensus 270 ~~~~~~v~~--~~s~d~~~l~ 288 (308)
+.....+.. .|..+|+..+
T Consensus 511 ~l~~g~~~~P~~y~~~G~qyv 531 (599)
T 1w6s_A 511 KIPSGAIGYPMTYTHKGTQYV 531 (599)
T ss_dssp ECSSCCCSCCEEEEETTEEEE
T ss_pred eCCCCcEeccEEEEeCCEEEE
Confidence 433332222 5667887544
No 250
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.59 E-value=9.6e-05 Score=66.93 Aligned_cols=154 Identities=12% Similarity=0.161 Sum_probs=96.2
Q ss_pred CeEEEEEcCCCceeeeEeeC--cc--------cceEEEEEe-CCCC---EEEEeeCCCcEEEEeCCCCeEEEEEeCCCe-
Q 021744 129 KFLHSWTVGDGFKLLTQLEG--HQ--------KVVSGITLP-SGSD---KLYSGSKDETVRVWDCASGQCAGVINLGGE- 193 (308)
Q Consensus 129 ~~i~iwd~~~~~~~~~~~~~--h~--------~~v~~~~~~-~~~~---~l~s~s~dg~v~~wd~~~~~~~~~~~~~~~- 193 (308)
+.|..+|+.++ +.+..++. |. .++. +... .+++ .++.++.+|.++++|.++++.+..+.....
T Consensus 291 ~~v~AlD~~TG-~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~ 368 (582)
T 1flg_A 291 SGQVGVDPSSG-EVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNI 368 (582)
T ss_dssp SEEEEECTTTC-CEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCC
T ss_pred ceEEEEeCCCC-CEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCc
Confidence 68999999999 66666643 21 1221 2222 4664 688899999999999999999887763220
Q ss_pred -------------e-------------------E---------------EEEcCCCEEEEE-------------------
Q 021744 194 -------------V-------------------G---------------CMISEGPWIFIG------------------- 207 (308)
Q Consensus 194 -------------v-------------------~---------------~~~~~~~~l~~~------------------- 207 (308)
+ . ++.++..++++.
T Consensus 369 ~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~ 448 (582)
T 1flg_A 369 TWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGS 448 (582)
T ss_dssp CSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTS
T ss_pred cccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCC
Confidence 0 0 011122233221
Q ss_pred ---------------cCCcEEEEEcCCCcee-eeeCCCCCEE--EEEEeCCEEEEEcCCCeEEEEEcCCCCcccccceec
Q 021744 208 ---------------VTNFVKAWNTQTNTDL-SLSGPVGQVY--AMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASL 269 (308)
Q Consensus 208 ---------------~d~~i~~wd~~~~~~~-~~~~~~~~v~--~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~ 269 (308)
.++.|..||+.+++.+ +..... ++. .+.....+++.++.||.++.||.+++ +.+.++
T Consensus 449 ~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG----~~lW~~ 523 (582)
T 1flg_A 449 AYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSG----KELWKF 523 (582)
T ss_dssp CCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTC----CEEEEE
T ss_pred ceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCC----CEEEEe
Confidence 1468999999999887 333221 221 12233337778999999999999998 566666
Q ss_pred cccCCCeEE--EEecCCCeEEE
Q 021744 270 KVHTDSNRA--HFSRDVTSLLG 289 (308)
Q Consensus 270 ~~~~~~v~~--~~s~d~~~l~~ 289 (308)
+........ .|..+|+..++
T Consensus 524 ~~~~g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 524 QTGSGIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp ECSSCCCSCCEEEEETTEEEEE
T ss_pred cCCCCcccCceEEEECCEEEEE
Confidence 544333332 56788875553
No 251
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.58 E-value=0.00015 Score=58.64 Aligned_cols=208 Identities=8% Similarity=-0.012 Sum_probs=125.4
Q ss_pred eeEEecCCCe--eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCC-ce-EEeeCCCeEEEEEcCCCceeeeEe
Q 021744 71 AKRFANNTWG--RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQG-NC-MYGEKCKFLHSWTVGDGFKLLTQL 146 (308)
Q Consensus 71 ~i~~s~~g~~--~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~g~~d~~i~iwd~~~~~~~~~~~ 146 (308)
.+++.|++.. ++-..++.|..++++...... ...........+.+.+++ .. ++....+.|.++++... ......
T Consensus 40 gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~-~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~-~~~~~~ 117 (267)
T 1npe_A 40 GLAFDCVDKVVYWTDISEPSIGRASLHGGEPTT-IIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT-QRRVLF 117 (267)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEESSSCCCEE-EECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEE
T ss_pred EEEEecCCCEEEEEECCCCEEEEEecCCCCcEE-EEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCC-CEEEEE
Confidence 6899997655 666677899999986553211 110111235667777754 44 55556789999998754 222222
Q ss_pred eCcccceEEEEEeCCCCEEEEeeC---CCcEEEEeCCCCeEEEEEe---CCCeeE-EEEcCCCEEEEEc--CCcEEEEEc
Q 021744 147 EGHQKVVSGITLPSGSDKLYSGSK---DETVRVWDCASGQCAGVIN---LGGEVG-CMISEGPWIFIGV--TNFVKAWNT 217 (308)
Q Consensus 147 ~~h~~~v~~~~~~~~~~~l~s~s~---dg~v~~wd~~~~~~~~~~~---~~~~v~-~~~~~~~~l~~~~--d~~i~~wd~ 217 (308)
.........++++|++..|+.+.. .+.|..+++... ....+. ...+.. ++.+++..|+.+. .+.|.++|+
T Consensus 118 ~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~ 196 (267)
T 1npe_A 118 DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNP 196 (267)
T ss_dssp CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEec
Confidence 222246789999997666554443 368888887643 233332 112222 3356677666544 679999999
Q ss_pred CCCceeeeeCCCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCCCcccccceeccccC-CCeEE-EEecCCC
Q 021744 218 QTNTDLSLSGPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHT-DSNRA-HFSRDVT 285 (308)
Q Consensus 218 ~~~~~~~~~~~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~v~~-~~s~d~~ 285 (308)
.......+.........+++..+ ++++....+.|..+|..++ +.+..+.... ..... ++.|++.
T Consensus 197 ~g~~~~~~~~~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g----~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 197 AQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAIS----KEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TEEEEEEEEECCCSEEEEEEETTEEEEEETTTTEEEEEETTTT----EEEEEECCSSCCCCCCEEEECSCC
T ss_pred CCCceEEEecCCCCceEEEEeCCEEEEEECCCCeEEEEeCCCC----CceEEEccccccccceeeecCccC
Confidence 86554433222344567877766 5556666789999999876 5556655332 12333 6777754
No 252
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.52 E-value=9.2e-05 Score=59.88 Aligned_cols=203 Identities=9% Similarity=-0.007 Sum_probs=120.2
Q ss_pred CCCCceEEecCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc-eeEEecCCCe--eeccCCCcEEEEECCCCCCc
Q 021744 24 GGGGLSTADTRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA-AKRFANNTWG--RNNNFNNHSNNYRAGNSKNS 100 (308)
Q Consensus 24 ~~~~~~~s~s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~-~i~~s~~g~~--~s~~~d~~i~vwd~~~~~~~ 100 (308)
+.+.++++...++.|..++...... ..+ .+ .+...+ .+++.|++.. ++-...+.|.+++++.....
T Consensus 46 ~~~~ly~~d~~~~~I~~~~~~g~~~---~~~---~~-----~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~ 114 (267)
T 1npe_A 46 VDKVVYWTDISEPSIGRASLHGGEP---TTI---IR-----QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR 114 (267)
T ss_dssp TTTEEEEEETTTTEEEEEESSSCCC---EEE---EC-----TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCCEEEEEECCCCEEEEEecCCCCc---EEE---EE-----CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE
Confidence 4456777777788999998765411 000 00 011122 7899997654 66667788999998643211
Q ss_pred ccccceeeeeeeeeeeecC-Cce-EEeeC--CCeEEEEEcCCCceeeeEee-CcccceEEEEEeCCCCEE-EEeeCCCcE
Q 021744 101 NINNRAVIKTDILCRNWVQ-GNC-MYGEK--CKFLHSWTVGDGFKLLTQLE-GHQKVVSGITLPSGSDKL-YSGSKDETV 174 (308)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~-~~~-~~g~~--d~~i~iwd~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l-~s~s~dg~v 174 (308)
............+.+.++ +.. ++... .+.|..+++... . ...+. ..-.....+++++++..| ++-...+.|
T Consensus 115 -~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I 191 (267)
T 1npe_A 115 -VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-N-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRA 191 (267)
T ss_dssp -EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-C-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred -EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-C-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEE
Confidence 111111123566788885 444 33322 468888887644 2 22222 233467899999987666 455566899
Q ss_pred EEEeCCCCeEEEEEeCCCeeEEEEcCCCEEEEEc--CCcEEEEEcCCCcee-eeeCCC-CCEEEEEEeCC
Q 021744 175 RVWDCASGQCAGVINLGGEVGCMISEGPWIFIGV--TNFVKAWNTQTNTDL-SLSGPV-GQVYAMAVGND 240 (308)
Q Consensus 175 ~~wd~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~--d~~i~~wd~~~~~~~-~~~~~~-~~v~~~~~~~~ 240 (308)
..+|+........+........+..++..|+++. ++.|..+|..+++.. .+.... .....+++.|+
T Consensus 192 ~~~~~~g~~~~~~~~~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~ 261 (267)
T 1npe_A 192 ECLNPAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALS 261 (267)
T ss_dssp EEEETTEEEEEEEEECCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECS
T ss_pred EEEecCCCceEEEecCCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCc
Confidence 9999986544433332222334444556666443 679999999988876 443222 24667777776
No 253
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.50 E-value=0.0008 Score=63.35 Aligned_cols=218 Identities=11% Similarity=0.067 Sum_probs=135.9
Q ss_pred eeEEecCCCeeeccCCCcEEEEECCCCCCccccc-----ceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeE
Q 021744 71 AKRFANNTWGRNNNFNNHSNNYRAGNSKNSNINN-----RAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQ 145 (308)
Q Consensus 71 ~i~~s~~g~~~s~~~d~~i~vwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~ 145 (308)
++...++|..-.|+.++-|..|+..+.+...... ......+.++....++..-.|..++-|..|+..++ +.. .
T Consensus 314 ~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~-~~~-~ 391 (795)
T 4a2l_A 314 SIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQ-RFT-S 391 (795)
T ss_dssp EEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTC-CEE-E
T ss_pred EEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCC-cEE-E
Confidence 6777788888556666668888875432211000 11122366777777788878888888999998876 222 2
Q ss_pred ee-C--------cccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEeC------CCeeEEEE--cCCCEEEEEc
Q 021744 146 LE-G--------HQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINL------GGEVGCMI--SEGPWIFIGV 208 (308)
Q Consensus 146 ~~-~--------h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~------~~~v~~~~--~~~~~l~~~~ 208 (308)
+. . ....|.++..++++..|..|+.++-+.++|.++++... +.. ...+.++. +++.+.+.+.
T Consensus 392 ~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~-~~~~~~~l~~~~v~~i~~d~~g~lwigt~ 470 (795)
T 4a2l_A 392 YTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVEN-FNQRNSQLVNENVYAILPDGEGNLWLGTL 470 (795)
T ss_dssp ECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEE-ECTTTSCCSCSCEEEEEECSSSCEEEEES
T ss_pred EecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEE-eecCCCCcCCCeeEEEEECCCCCEEEEec
Confidence 21 1 23578999998888756667777779999998876433 321 24566664 3466555554
Q ss_pred CCcEEEEEcCCCceeeeeC-------CCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCCCccccc-ce---e-ccccCCC
Q 021744 209 TNFVKAWNTQTNTDLSLSG-------PVGQVYAMAVGND-LLFAGTQDGAILAWKFNVTTNCFEP-AA---S-LKVHTDS 275 (308)
Q Consensus 209 d~~i~~wd~~~~~~~~~~~-------~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~-~~---~-~~~~~~~ 275 (308)
+-+.+||..+++...+.. ....|.++...++ .+..|+. +-|..||..+. +. .. . -......
T Consensus 471 -~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~----~~~~~~~~~~~~l~~~~ 544 (795)
T 4a2l_A 471 -SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGL----DIQKASILPVSNVTKLF 544 (795)
T ss_dssp -SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETT----EEEECCCSCSCGGGGSC
T ss_pred -CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCC----eEEEecCCCCCCCCCCe
Confidence 668999998876653321 2357899988887 5555555 56888887764 21 00 0 0112345
Q ss_pred eEE-EEecCCCeEEEeeceEEEEe
Q 021744 276 NRA-HFSRDVTSLLGSVSFIMFIG 298 (308)
Q Consensus 276 v~~-~~s~d~~~l~~s~s~~i~~~ 298 (308)
|.+ ...++|.+.+++.. .|+..
T Consensus 545 i~~i~~d~~g~lWigT~~-Gl~~~ 567 (795)
T 4a2l_A 545 TNCIYEASNGIIWVGTRE-GFYCF 567 (795)
T ss_dssp EEEEEECTTSCEEEEESS-CEEEE
T ss_pred eEEEEECCCCCEEEEeCC-CceeE
Confidence 666 66778876665543 34443
No 254
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.47 E-value=0.00026 Score=64.02 Aligned_cols=190 Identities=9% Similarity=-0.034 Sum_probs=107.7
Q ss_pred CCceEEecC-CCeEEEeec-CCCCC-CCCCcccccCCCCCCcc----ccc-cceeEEecCCCe-eeccCCCcEEEEECCC
Q 021744 26 GGLSTADTR-QKVCNYWRA-GKCNR-FPCPYLHRELPLPPAAT----ANG-AAAKRFANNTWG-RNNNFNNHSNNYRAGN 96 (308)
Q Consensus 26 ~~~~~s~s~-d~~i~~W~~-~~~~~-~~~~~~~~~~~~~~~~~----gh~-~~~i~~s~~g~~-~s~~~d~~i~vwd~~~ 96 (308)
+..+..++. ++.|.-.|+ .+++. +.... +...... .+. ...+++ .+.. +.++.|+.|..+|..+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~t 134 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKP-----KQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKT 134 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECC-----CCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcC-----CCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCC
Confidence 445556666 888999998 77731 11100 0000000 000 001233 2445 7777899999999988
Q ss_pred CCCccccccee-ee--eeeeeeeecCCceEEeeC------CCeEEEEEcCCCceeeeEeeCcccc---------------
Q 021744 97 SKNSNINNRAV-IK--TDILCRNWVQGNCMYGEK------CKFLHSWTVGDGFKLLTQLEGHQKV--------------- 152 (308)
Q Consensus 97 ~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~g~~------d~~i~iwd~~~~~~~~~~~~~h~~~--------------- 152 (308)
++.+-...... .. .+...-...++..+.+.. ++.|+.+|..++ +.+..+......
T Consensus 135 G~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG-~~~W~~~~~~~~~~~~~~p~~~~~~~~ 213 (571)
T 2ad6_A 135 GKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTG-ELKWRAFATGSDDSVRLAKDFNSANPH 213 (571)
T ss_dssp CCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTC-CEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCC-cEEEEEccCCCccccccCccccccccc
Confidence 87653211110 00 111111112455555544 789999999999 666655432110
Q ss_pred ----------------------e-EEEEEeCCCCEEEEeeCC----------------CcEEEEeCCCCeEEEEEeCC--
Q 021744 153 ----------------------V-SGITLPSGSDKLYSGSKD----------------ETVRVWDCASGQCAGVINLG-- 191 (308)
Q Consensus 153 ----------------------v-~~~~~~~~~~~l~s~s~d----------------g~v~~wd~~~~~~~~~~~~~-- 191 (308)
+ ..++++++...++.+..+ +.|..+|.++++.+..++..
T Consensus 214 ~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~ 293 (571)
T 2ad6_A 214 YGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPH 293 (571)
T ss_dssp GCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTT
T ss_pred ccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCC
Confidence 0 235677766677665532 35999999999999988732
Q ss_pred ---------CeeE-EEEcCCC---EEEEEc-CCcEEEEEcCCCcee
Q 021744 192 ---------GEVG-CMISEGP---WIFIGV-TNFVKAWNTQTNTDL 223 (308)
Q Consensus 192 ---------~~v~-~~~~~~~---~l~~~~-d~~i~~wd~~~~~~~ 223 (308)
.++. ....+++ .++.+. +|.+.++|..+++.+
T Consensus 294 d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~ 339 (571)
T 2ad6_A 294 DEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLI 339 (571)
T ss_dssp CSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred cccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEE
Confidence 1111 1123664 455565 889999999999877
No 255
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.44 E-value=1.2e-05 Score=74.03 Aligned_cols=217 Identities=10% Similarity=-0.013 Sum_probs=116.7
Q ss_pred eeEEecCCCe-eeccC-CCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEee-CC-----CeEEEEEcCCCce
Q 021744 71 AKRFANNTWG-RNNNF-NNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGE-KC-----KFLHSWTVGDGFK 141 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~-~d-----~~i~iwd~~~~~~ 141 (308)
.+++.+++.. +.|+. +..+.+||..+.+............-..+...+++.+ +.|+ .+ ..+.+||+.+. +
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~-~ 325 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK-T 325 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT-E
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCC-c
Confidence 3677889998 88874 5689999987654322111111111233445556665 7777 34 57899999876 2
Q ss_pred eeeEeeC-----cccceEEEEEeCCCCEEEEeeCC---------CcEEEEeCCCCeEEEEEeCCC----------eeEEE
Q 021744 142 LLTQLEG-----HQKVVSGITLPSGSDKLYSGSKD---------ETVRVWDCASGQCAGVINLGG----------EVGCM 197 (308)
Q Consensus 142 ~~~~~~~-----h~~~v~~~~~~~~~~~l~s~s~d---------g~v~~wd~~~~~~~~~~~~~~----------~v~~~ 197 (308)
- ..+.. ....-....+..++...+.++.+ ..+..||..+.+......... ...++
T Consensus 326 W-~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av 404 (656)
T 1k3i_A 326 W-TSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAV 404 (656)
T ss_dssp E-EEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEE
T ss_pred c-eeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceE
Confidence 2 22210 00000001122344444444444 456788988776443332111 11222
Q ss_pred -E--cCCCEEEEEc-CC-----------cEEEEEcCCCceeeee---CCCCCE-EEEEEeCC--EEEEEcCC--------
Q 021744 198 -I--SEGPWIFIGV-TN-----------FVKAWNTQTNTDLSLS---GPVGQV-YAMAVGND--LLFAGTQD-------- 248 (308)
Q Consensus 198 -~--~~~~~l~~~~-d~-----------~i~~wd~~~~~~~~~~---~~~~~v-~~~~~~~~--~l~~g~~d-------- 248 (308)
. .++++++.|. ++ .+.+||..+.+..... .+.... .+++..|+ +++.|+.+
T Consensus 405 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~ 484 (656)
T 1k3i_A 405 MYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDS 484 (656)
T ss_dssp EEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCC
T ss_pred eccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCC
Confidence 2 3677777765 22 5778888877655332 222222 34455555 77777754
Q ss_pred ---CeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee
Q 021744 249 ---GAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV 291 (308)
Q Consensus 249 ---g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~ 291 (308)
..+.+||..+.+ ++.+..+........+ .+.+|+++++.++
T Consensus 485 ~~~~~v~~ydp~t~~--W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG 529 (656)
T 1k3i_A 485 TPVFTPEIYVPEQDT--FYKQNPNSIVRVYHSISLLLPDGRVFNGGG 529 (656)
T ss_dssp SBCCCCEEEEGGGTE--EEECCCCSSCCCTTEEEEECTTSCEEEEEC
T ss_pred CcccceEEEcCCCCc--eeecCCCCCccccccHhhcCCCcEEEecCC
Confidence 468999988753 2444433333333344 6678999887554
No 256
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.41 E-value=0.00061 Score=61.79 Aligned_cols=197 Identities=9% Similarity=-0.008 Sum_probs=112.1
Q ss_pred CCceEEecC-CCeEEEeec-CCCCC-CCCCcccccCCCCCCccccccceeEEec-CCC----eeeccCCCcEEEEECCCC
Q 021744 26 GGLSTADTR-QKVCNYWRA-GKCNR-FPCPYLHRELPLPPAATANGAAAKRFAN-NTW----GRNNNFNNHSNNYRAGNS 97 (308)
Q Consensus 26 ~~~~~s~s~-d~~i~~W~~-~~~~~-~~~~~~~~~~~~~~~~~gh~~~~i~~s~-~g~----~~s~~~d~~i~vwd~~~~ 97 (308)
+..+..++. ++.|.-.|+ .+++. +...........+..........++++| ++. .+.++.|+.|..+|..++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 455666666 888999998 77732 1111000000000000000011356653 444 467778999999999888
Q ss_pred CCccccccee-ee--eeeeeeeecCCceEEee------CCCeEEEEEcCCCceeeeEeeCcccc----------------
Q 021744 98 KNSNINNRAV-IK--TDILCRNWVQGNCMYGE------KCKFLHSWTVGDGFKLLTQLEGHQKV---------------- 152 (308)
Q Consensus 98 ~~~~~~~~~~-~~--~~~~~~~~~~~~~~~g~------~d~~i~iwd~~~~~~~~~~~~~h~~~---------------- 152 (308)
+.+-...... .. .+...-...++..+.++ .++.|+.+|.+++ +.+..+......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG-~~~W~~~~~~~~~~~~~~p~~~~~~~~~ 220 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTG-EQVWRAYATGPDKDLLLASDFNIKNPHY 220 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTC-CEEEEEESSSCHHHHTBCTTTTTTCGGG
T ss_pred CEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCC-cEEEEEcCCCCccccccccccccccccc
Confidence 7653211110 00 11111111245555554 3799999999999 666655432111
Q ss_pred ---------------------e-EEEEEeCCCCEEEEeeCC----------------CcEEEEeCCCCeEEEEEeCCC--
Q 021744 153 ---------------------V-SGITLPSGSDKLYSGSKD----------------ETVRVWDCASGQCAGVINLGG-- 192 (308)
Q Consensus 153 ---------------------v-~~~~~~~~~~~l~s~s~d----------------g~v~~wd~~~~~~~~~~~~~~-- 192 (308)
+ ..+++.++..+++.+..+ ..|..+|.++++.+..++...
T Consensus 221 g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d 300 (599)
T 1w6s_A 221 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHD 300 (599)
T ss_dssp CCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTC
T ss_pred cccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCc
Confidence 0 135667777777777655 389999999999999888321
Q ss_pred ---------eeEEEE--cCC---CEEEEEc-CCcEEEEEcCCCcee
Q 021744 193 ---------EVGCMI--SEG---PWIFIGV-TNFVKAWNTQTNTDL 223 (308)
Q Consensus 193 ---------~v~~~~--~~~---~~l~~~~-d~~i~~wd~~~~~~~ 223 (308)
++..-. .++ +.++.+. +|.+.++|.++++.+
T Consensus 301 ~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 346 (599)
T 1w6s_A 301 EWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALV 346 (599)
T ss_dssp SSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred cccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEe
Confidence 121111 456 3555555 899999999999877
No 257
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.40 E-value=0.0005 Score=56.80 Aligned_cols=213 Identities=12% Similarity=0.009 Sum_probs=122.8
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCceEEee--CCC-eEEEEEcCCCceeeeEe
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNCMYGE--KCK-FLHSWTVGDGFKLLTQL 146 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~d~-~i~iwd~~~~~~~~~~~ 146 (308)
.++++++|.. ++-..++.|..||.+... . ........+..+.+.+++..+.+. .++ .|..++..++ +.....
T Consensus 36 gia~~~~g~lyv~d~~~~~I~~~d~~g~~-~--~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g-~~~~~~ 111 (306)
T 2p4o_A 36 NLASAPDGTIFVTNHEVGEIVSITPDGNQ-Q--IHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDG-TVETLL 111 (306)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTTCCE-E--EEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTS-CEEEEE
T ss_pred eEEECCCCCEEEEeCCCCeEEEECCCCce-E--EEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCC-eEEEEE
Confidence 6899999988 777788899999876431 1 111112346677888888774443 222 4667777776 332211
Q ss_pred e-CcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeE-EEEEe----------CCCeeEEEEcCCCEEEEEc--CCcE
Q 021744 147 E-GHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQC-AGVIN----------LGGEVGCMISEGPWIFIGV--TNFV 212 (308)
Q Consensus 147 ~-~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~-~~~~~----------~~~~v~~~~~~~~~l~~~~--d~~i 212 (308)
. ........++..+++..+++-..++.|..+|..+++. +.... .-.....+.++++.|+++. .+.|
T Consensus 112 ~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~I 191 (306)
T 2p4o_A 112 TLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLL 191 (306)
T ss_dssp ECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEE
T ss_pred eCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCEE
Confidence 1 1122334555555554455555688999999876532 21111 0012233477787776554 6799
Q ss_pred EEEEcCC-Ccee---eeeCCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEe---c
Q 021744 213 KAWNTQT-NTDL---SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFS---R 282 (308)
Q Consensus 213 ~~wd~~~-~~~~---~~~~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s---~ 282 (308)
..||+.. ++.. .+.. ......++++++ ++++....+.|.++|.. ++. ..+..+........+ +|. |
T Consensus 192 ~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~--~~~~~~~~~~~~p~~~a~~g~~~ 267 (306)
T 2p4o_A 192 LRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RST--TIIAQAEQGVIGSTAVAFGQTEG 267 (306)
T ss_dssp EEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCE--EEEECGGGTCTTEEEEEECCSTT
T ss_pred EEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCE--EEEeecccccCCceEEEEecccC
Confidence 9999875 3221 1111 134566888888 55555567889999865 311 112233333344555 998 8
Q ss_pred CCCeEEEee
Q 021744 283 DVTSLLGSV 291 (308)
Q Consensus 283 d~~~l~~s~ 291 (308)
|++.|+++.
T Consensus 268 d~~~LyVt~ 276 (306)
T 2p4o_A 268 DCTAIYVVT 276 (306)
T ss_dssp TTTEEEEEE
T ss_pred CCCEEEEEC
Confidence 877776443
No 258
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.40 E-value=0.00032 Score=58.34 Aligned_cols=211 Identities=10% Similarity=0.063 Sum_probs=122.0
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCCCccccc------------------ceeeeeeeeeeeec-CCceEEeeCCCe
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINN------------------RAVIKTDILCRNWV-QGNCMYGEKCKF 130 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~------------------~~~~~~~~~~~~~~-~~~~~~g~~d~~ 130 (308)
.+++.++|.. .++..++.|..||..+++...... ......+..+.+.+ ++.++.+...+.
T Consensus 23 ~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~~~ 102 (322)
T 2fp8_A 23 SFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYH 102 (322)
T ss_dssp CEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTTE
T ss_pred EEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECCCC
Confidence 5899999986 778888999999886543211000 00012355677776 677765655566
Q ss_pred EEEEEcCCCceeeeEeeCc-----ccceEEEEEeC-CCCEEEEeeC-----------------CCcEEEEeCCCCeEEEE
Q 021744 131 LHSWTVGDGFKLLTQLEGH-----QKVVSGITLPS-GSDKLYSGSK-----------------DETVRVWDCASGQCAGV 187 (308)
Q Consensus 131 i~iwd~~~~~~~~~~~~~h-----~~~v~~~~~~~-~~~~l~s~s~-----------------dg~v~~wd~~~~~~~~~ 187 (308)
|..+|..++ + +..+... ......+++.+ ++...++-.. ++.|..+|..+++....
T Consensus 103 i~~~d~~~g-~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~ 180 (322)
T 2fp8_A 103 LSVVGSEGG-H-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLL 180 (322)
T ss_dssp EEEECTTCE-E-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEE
T ss_pred EEEEeCCCC-E-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEe
Confidence 888887755 2 2222211 13467899999 8877665432 36788999887765433
Q ss_pred Ee-CCCe-eEEEEcCCCEEEEE-c-CCcEEEEEcCCC---ceeeeeCCCCCEEEEEEeCC--EEEEEcC----------C
Q 021744 188 IN-LGGE-VGCMISEGPWIFIG-V-TNFVKAWNTQTN---TDLSLSGPVGQVYAMAVGND--LLFAGTQ----------D 248 (308)
Q Consensus 188 ~~-~~~~-v~~~~~~~~~l~~~-~-d~~i~~wd~~~~---~~~~~~~~~~~v~~~~~~~~--~l~~g~~----------d 248 (308)
.. ...+ -.++.+++++|+++ . .+.|..|++... ....+..... ...+++.++ ++++... .
T Consensus 181 ~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~ 259 (322)
T 2fp8_A 181 LKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVD 259 (322)
T ss_dssp EEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEE
T ss_pred ccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCc
Confidence 22 1122 22456788866655 3 679999998753 2222222223 788999988 3333322 3
Q ss_pred CeEEEEEcCCCCcccccceeccccC----CCeEE-EEecCCCeEEEe
Q 021744 249 GAILAWKFNVTTNCFEPAASLKVHT----DSNRA-HFSRDVTSLLGS 290 (308)
Q Consensus 249 g~i~iwd~~~~~~~~~~~~~~~~~~----~~v~~-~~s~d~~~l~~s 290 (308)
+.|..+|.. + +.+..+.... ..+.. ++ .++++.+++
T Consensus 260 ~~v~~~d~~-G----~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~ 300 (322)
T 2fp8_A 260 PKGIKFDEF-G----NILEVIPLPPPFAGEHFEQIQE-HDGLLYIGT 300 (322)
T ss_dssp EEEEEECTT-S----CEEEEEECCTTTTTSCCCEEEE-ETTEEEEEC
T ss_pred cEEEEECCC-C----CEEEEEECCCCCccccceEEEE-eCCEEEEee
Confidence 567777754 2 4444443221 23444 44 455555543
No 259
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.35 E-value=0.002 Score=60.64 Aligned_cols=213 Identities=6% Similarity=-0.064 Sum_probs=130.3
Q ss_pred eeEEecCCCeeeccCCCcEEEEECCCCCCcccccc-------eeeeeeeeeeeecCCc-eEEeeCCCeEEEEEcCCCcee
Q 021744 71 AKRFANNTWGRNNNFNNHSNNYRAGNSKNSNINNR-------AVIKTDILCRNWVQGN-CMYGEKCKFLHSWTVGDGFKL 142 (308)
Q Consensus 71 ~i~~s~~g~~~s~~~d~~i~vwd~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-~~~g~~d~~i~iwd~~~~~~~ 142 (308)
++...++|..-.|+.++-|..|+..+++....... .....+.++....++. +..|..++-|.++|..++ +.
T Consensus 361 ~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~-~~ 439 (795)
T 4a2l_A 361 CIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSG-QV 439 (795)
T ss_dssp EEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTC-CE
T ss_pred EEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCC-cE
Confidence 56667778775567776699999876543211110 0123366677777888 777888788999999877 32
Q ss_pred eeEee-----CcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEeC-------CCeeEEEE--cCCCEEEEEc
Q 021744 143 LTQLE-----GHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINL-------GGEVGCMI--SEGPWIFIGV 208 (308)
Q Consensus 143 ~~~~~-----~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~-------~~~v~~~~--~~~~~l~~~~ 208 (308)
..+. .....|.++...+++.+.+.. .+ -+.+||.++++....... ...+.++. +++++.+.+.
T Consensus 440 -~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~ 516 (795)
T 4a2l_A 440 -ENFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE 516 (795)
T ss_dssp -EEECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES
T ss_pred -EEeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC
Confidence 2332 134578999988888755544 44 488999887754332211 23456664 4566655555
Q ss_pred CCcEEEEEcCCCceeeee-------CCCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCCCcccccceeccc-cCCCeEE-
Q 021744 209 TNFVKAWNTQTNTDLSLS-------GPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAASLKV-HTDSNRA- 278 (308)
Q Consensus 209 d~~i~~wd~~~~~~~~~~-------~~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~v~~- 278 (308)
+-+..||..+++. .+. .....|.++...++ .+..|+.. -+..||..+..- +......+ ....|.+
T Consensus 517 -~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~d~~~~~~--~~~~~~~gl~~~~i~~i 591 (795)
T 4a2l_A 517 -EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE-GFYCFNEKDKQI--KRYNTTNGLPNNVVYGI 591 (795)
T ss_dssp -SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS-CEEEEETTTTEE--EEECGGGTCSCSCEEEE
T ss_pred -CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC-CceeECCCCCcE--EEeCCCCCCchhheEEE
Confidence 6788899877665 322 12357899998887 55555555 577888766421 11111111 1234666
Q ss_pred EEecCCCeEEEeec
Q 021744 279 HFSRDVTSLLGSVS 292 (308)
Q Consensus 279 ~~s~d~~~l~~s~s 292 (308)
...++|.+.+++..
T Consensus 592 ~~d~~g~lWi~t~~ 605 (795)
T 4a2l_A 592 LEDSFGRLWLSTNR 605 (795)
T ss_dssp EECTTSCEEEEETT
T ss_pred EECCCCCEEEEcCC
Confidence 66777877666543
No 260
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.24 E-value=0.00095 Score=62.44 Aligned_cols=183 Identities=12% Similarity=0.009 Sum_probs=106.4
Q ss_pred eeEEe-cCCCe-e-eccCC----CcEEEEECCCC-CCcccccceeeeeeeeeeeecCCce-EEeeCC-----CeEEEEEc
Q 021744 71 AKRFA-NNTWG-R-NNNFN----NHSNNYRAGNS-KNSNINNRAVIKTDILCRNWVQGNC-MYGEKC-----KFLHSWTV 136 (308)
Q Consensus 71 ~i~~s-~~g~~-~-s~~~d----~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d-----~~i~iwd~ 136 (308)
..+|| |||+. | +...+ .+|+++|++++ +.+... .........|+|++.. +....+ ..|+++++
T Consensus 178 ~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~---~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 178 EVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK---VSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC---EEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred eeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc---ccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 68999 99997 3 33222 35999999888 643211 1222456788999854 444433 36888888
Q ss_pred CCCcee-eeEee-CcccceEEEEEeCCCCEEEEeeC---CCcEEEEeCCCC--eE-EEEEe--CCCeeEEEE-cCCCEEE
Q 021744 137 GDGFKL-LTQLE-GHQKVVSGITLPSGSDKLYSGSK---DETVRVWDCASG--QC-AGVIN--LGGEVGCMI-SEGPWIF 205 (308)
Q Consensus 137 ~~~~~~-~~~~~-~h~~~v~~~~~~~~~~~l~s~s~---dg~v~~wd~~~~--~~-~~~~~--~~~~v~~~~-~~~~~l~ 205 (308)
.++... ...+. ........+.|+||+++|+..+. ...|.++|+.++ +. +..+. ......... ..++.|+
T Consensus 255 gt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~ 334 (751)
T 2xe4_A 255 GKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLV 334 (751)
T ss_dssp TSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEE
T ss_pred CCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEE
Confidence 776211 22222 22345678899999998876553 346888898875 22 12222 222323332 4466554
Q ss_pred -EEc-C----CcEEEEEcCC-Cceee-eeCCCC--CEEEEEEeCC-EEEEEcCCCeEE--EEEc
Q 021744 206 -IGV-T----NFVKAWNTQT-NTDLS-LSGPVG--QVYAMAVGND-LLFAGTQDGAIL--AWKF 256 (308)
Q Consensus 206 -~~~-d----~~i~~wd~~~-~~~~~-~~~~~~--~v~~~~~~~~-~l~~g~~dg~i~--iwd~ 256 (308)
.+. + ..|..+|+.+ ++... +..+.. .+..+.+..+ ++++...++..+ ++++
T Consensus 335 ~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 335 ILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred EEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 443 3 2677788775 23233 333433 4566777766 777777888655 4554
No 261
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.21 E-value=0.0039 Score=58.56 Aligned_cols=215 Identities=10% Similarity=-0.016 Sum_probs=129.0
Q ss_pred eeEEecCCCeeeccCCCcEEEEECCCCCCccccc--------ceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCcee
Q 021744 71 AKRFANNTWGRNNNFNNHSNNYRAGNSKNSNINN--------RAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKL 142 (308)
Q Consensus 71 ~i~~s~~g~~~s~~~d~~i~vwd~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~ 142 (308)
++...++|.+-.|+.++-|..++..+........ ......+.++....++.+..|..++-|..|+..++ +.
T Consensus 317 ~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~-~~ 395 (781)
T 3v9f_A 317 YIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKR-VA 395 (781)
T ss_dssp EEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEE-EE
T ss_pred EEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCC-eE
Confidence 5666777877556666668888876543211110 01112366666667778877887777889998765 22
Q ss_pred eeEe---eCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe---CCCeeEEEEcC-CCEEEEEcCCcEEEE
Q 021744 143 LTQL---EGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN---LGGEVGCMISE-GPWIFIGVTNFVKAW 215 (308)
Q Consensus 143 ~~~~---~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~---~~~~v~~~~~~-~~~l~~~~d~~i~~w 215 (308)
..-. ......|.++...+++.+.+ |+.++-+..+|.++++...... ....+.++..+ ...|.+|..+-|..|
T Consensus 396 ~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~~Gl~~~ 474 (781)
T 3v9f_A 396 IYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTHAGVFVI 474 (781)
T ss_dssp ECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEETTEEEEE
T ss_pred EEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEECCceEEE
Confidence 2111 12346788998887776544 6666778999988775432211 23456666543 334444444779999
Q ss_pred EcCCCceeeeeC-C-----CCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCCCcccccceecc----ccCCCeEE-EEecC
Q 021744 216 NTQTNTDLSLSG-P-----VGQVYAMAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAASLK----VHTDSNRA-HFSRD 283 (308)
Q Consensus 216 d~~~~~~~~~~~-~-----~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~v~~-~~s~d 283 (308)
|..+++...+.. . ...|.++...++ .|..|+.++-+..||..+.. +..+. .....|.+ ...++
T Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~-----~~~~~~~~~l~~~~i~~i~~d~~ 549 (781)
T 3v9f_A 475 DLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQL-----VRKFNQYEGFCSNTINQIYRSSK 549 (781)
T ss_dssp ESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCE-----EEEECTTTTCSCSCEEEEEECTT
T ss_pred eCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCe-----EEEccCCCCCCCCeeEEEEECCC
Confidence 988776553321 1 357899988887 66666664457778876542 22221 12345666 66677
Q ss_pred CCeEEEeec
Q 021744 284 VTSLLGSVS 292 (308)
Q Consensus 284 ~~~l~~s~s 292 (308)
|.+.+++..
T Consensus 550 g~lWi~T~~ 558 (781)
T 3v9f_A 550 GQMWLATGE 558 (781)
T ss_dssp SCEEEEETT
T ss_pred CCEEEEECC
Confidence 776665543
No 262
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.20 E-value=0.00084 Score=60.75 Aligned_cols=145 Identities=10% Similarity=-0.081 Sum_probs=87.5
Q ss_pred CCe-eeccCCCcEEEEECCCCCCccccccee-ee--eee-eeeeecC---C--ceEEee------CCCeEEEEEcCCCce
Q 021744 78 TWG-RNNNFNNHSNNYRAGNSKNSNINNRAV-IK--TDI-LCRNWVQ---G--NCMYGE------KCKFLHSWTVGDGFK 141 (308)
Q Consensus 78 g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~-~~--~~~-~~~~~~~---~--~~~~g~------~d~~i~iwd~~~~~~ 141 (308)
+.. +.++.|+.|..+|.++++.+-...... .. .+. .-....+ + ..+.+. .++.|+-+|..++ +
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG-~ 195 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTG-E 195 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTC-C
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCC-C
Confidence 344 777889999999998887543221111 00 010 0011111 2 334443 3789999999998 5
Q ss_pred eeeEeeCcccc----------------------------------------e-EEEEEeCCCCEEEEeeC----------
Q 021744 142 LLTQLEGHQKV----------------------------------------V-SGITLPSGSDKLYSGSK---------- 170 (308)
Q Consensus 142 ~~~~~~~h~~~----------------------------------------v-~~~~~~~~~~~l~s~s~---------- 170 (308)
.+......... + ..++++|+..+++.+..
T Consensus 196 ~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r 275 (582)
T 1flg_A 196 EIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWAR 275 (582)
T ss_dssp EEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGG
T ss_pred EEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCccc
Confidence 55544321000 0 13566777777766553
Q ss_pred ----------C----CcEEEEeCCCCeEEEEEeCC-----------CeeEEEE--cCCC---EEEEEc-CCcEEEEEcCC
Q 021744 171 ----------D----ETVRVWDCASGQCAGVINLG-----------GEVGCMI--SEGP---WIFIGV-TNFVKAWNTQT 219 (308)
Q Consensus 171 ----------d----g~v~~wd~~~~~~~~~~~~~-----------~~v~~~~--~~~~---~l~~~~-d~~i~~wd~~~ 219 (308)
| +.|..+|.++++.+..++.. .++..-. .+++ .++.++ +|.++++|.++
T Consensus 276 ~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t 355 (582)
T 1flg_A 276 TAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSN 355 (582)
T ss_dssp SCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTT
T ss_pred ccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCC
Confidence 2 58999999999999998732 1121111 3564 566665 89999999999
Q ss_pred Ccee
Q 021744 220 NTDL 223 (308)
Q Consensus 220 ~~~~ 223 (308)
++.+
T Consensus 356 G~~l 359 (582)
T 1flg_A 356 GKLQ 359 (582)
T ss_dssp CCEE
T ss_pred CCEe
Confidence 9877
No 263
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.17 E-value=0.0038 Score=58.57 Aligned_cols=215 Identities=11% Similarity=-0.010 Sum_probs=127.6
Q ss_pred eeEEecCCCeeeccCCCcEEEEECCCCCCcccc--cceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEee-
Q 021744 71 AKRFANNTWGRNNNFNNHSNNYRAGNSKNSNIN--NRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLE- 147 (308)
Q Consensus 71 ~i~~s~~g~~~s~~~d~~i~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~- 147 (308)
++...++|.+-.|+.++-|..||..+++..... .......+.++....++.+..|..++-+..++..++ +. ..+.
T Consensus 367 ~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~-~~-~~~~~ 444 (781)
T 3v9f_A 367 SVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLK-KF-QIIEL 444 (781)
T ss_dssp EEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSC-EE-EECCS
T ss_pred EEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCC-cE-EEecc
Confidence 566667777755565556888887644221100 011123366666666777877887788999998776 33 2232
Q ss_pred --CcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEeC------CCeeEEEE--cCCCEEEEEcCCcEEEEEc
Q 021744 148 --GHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINL------GGEVGCMI--SEGPWIFIGVTNFVKAWNT 217 (308)
Q Consensus 148 --~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~------~~~v~~~~--~~~~~l~~~~d~~i~~wd~ 217 (308)
.....|.++...+++.+.+ |+. +-+..+|..+++....... ...+.++. +++.+.+++..+-+..||.
T Consensus 445 ~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~ 522 (781)
T 3v9f_A 445 EKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTP 522 (781)
T ss_dssp TTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECT
T ss_pred CCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeC
Confidence 1346788998888776444 445 4588999887654433321 24566664 4566666555456888998
Q ss_pred CCCceeeeeC----CCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCCCcccccceeccc-cCCCeEE-EEecCCCeEEEe
Q 021744 218 QTNTDLSLSG----PVGQVYAMAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAASLKV-HTDSNRA-HFSRDVTSLLGS 290 (308)
Q Consensus 218 ~~~~~~~~~~----~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~v~~-~~s~d~~~l~~s 290 (308)
.+++...+.. ....|.++...++ .|..|+.+|.|..||..+.+- +....-.+ ....+.+ ...++|.+.+++
T Consensus 523 ~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~~Glv~~~d~~~~~~--~~~~~~~gl~~~~i~~i~~d~~g~lW~~t 600 (781)
T 3v9f_A 523 DMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATGEGLVCFPSARNFDY--QVFQRKEGLPNTHIRAISEDKNGNIWAST 600 (781)
T ss_dssp TCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEETTEEEEESCTTTCCC--EEECGGGTCSCCCCCEEEECSSSCEEEEC
T ss_pred CCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEECCCceEEECCCCCcE--EEccccCCCCCceEEEEEECCCCCEEEEc
Confidence 8776554432 2357899988877 555566666658888776421 11111111 1223555 666677666655
Q ss_pred e
Q 021744 291 V 291 (308)
Q Consensus 291 ~ 291 (308)
.
T Consensus 601 ~ 601 (781)
T 3v9f_A 601 N 601 (781)
T ss_dssp S
T ss_pred C
Confidence 4
No 264
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.13 E-value=0.00024 Score=63.46 Aligned_cols=170 Identities=15% Similarity=0.078 Sum_probs=111.0
Q ss_pred CCce--EEeeCCCeEEEEEcCCCceeeeEeeC-cccceEEEEE-e-CCCCEEEEee------------------CCCcEE
Q 021744 119 QGNC--MYGEKCKFLHSWTVGDGFKLLTQLEG-HQKVVSGITL-P-SGSDKLYSGS------------------KDETVR 175 (308)
Q Consensus 119 ~~~~--~~g~~d~~i~iwd~~~~~~~~~~~~~-h~~~v~~~~~-~-~~~~~l~s~s------------------~dg~v~ 175 (308)
+|.. +....++.|.+.|+.+. +..+.+.- ....+..+++ . |++++++.++ .++.+.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~-~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVM-KCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTT-EEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCc-eEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 5544 55556788999999998 66663331 2345788887 5 8999988874 356899
Q ss_pred EEeCCCCeEEEEEeCCCe--eEEEEcCCCEEEEEc-C--------------------------------------CcEEE
Q 021744 176 VWDCASGQCAGVINLGGE--VGCMISEGPWIFIGV-T--------------------------------------NFVKA 214 (308)
Q Consensus 176 ~wd~~~~~~~~~~~~~~~--v~~~~~~~~~l~~~~-d--------------------------------------~~i~~ 214 (308)
+.|..+.+.+.++..... -..+.++++++++++ + +.|.+
T Consensus 179 vID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 999999999988884222 234567888887654 2 13666
Q ss_pred EEcCC--Cce-e-eeeCCCCCEEEEEEeCC---EEEEEcCCCeEEEEEcCCCCc--------ccccceeccccCCCeEEE
Q 021744 215 WNTQT--NTD-L-SLSGPVGQVYAMAVGND---LLFAGTQDGAILAWKFNVTTN--------CFEPAASLKVHTDSNRAH 279 (308)
Q Consensus 215 wd~~~--~~~-~-~~~~~~~~v~~~~~~~~---~l~~g~~dg~i~iwd~~~~~~--------~~~~~~~~~~~~~~v~~~ 279 (308)
.|.++ ++. + .+.. .....++.++|| .++++-.+.+|.++|+.+.+. ....+.++..-..+...+
T Consensus 259 ID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~a 337 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTA 337 (595)
T ss_dssp EECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEE
T ss_pred EeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEE
Confidence 67766 333 2 2222 234567999999 566666789999999996310 001233444333444449
Q ss_pred EecCCCeEEEee
Q 021744 280 FSRDVTSLLGSV 291 (308)
Q Consensus 280 ~s~d~~~l~~s~ 291 (308)
|+|+| ++.++.
T Consensus 338 F~~dG-~aY~t~ 348 (595)
T 1fwx_A 338 FDGRG-NAYTSL 348 (595)
T ss_dssp ECTTS-EEEEEE
T ss_pred ECCCC-eEEEEE
Confidence 99999 776655
No 265
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.03 E-value=0.005 Score=52.66 Aligned_cols=187 Identities=8% Similarity=-0.066 Sum_probs=111.6
Q ss_pred eeEEecCCCe--eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecC-Cce-EEeeCCCeEEEEEcCCCceeeeEe
Q 021744 71 AKRFANNTWG--RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQ-GNC-MYGEKCKFLHSWTVGDGFKLLTQL 146 (308)
Q Consensus 71 ~i~~s~~g~~--~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~g~~d~~i~iwd~~~~~~~~~~~ 146 (308)
.++|.+.+.. ++-...+.|..++++........ .........+++.+. +.+ ++....+.|.+.++... .....+
T Consensus 120 gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~-~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~-~~~~l~ 197 (386)
T 3v65_B 120 ALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV-STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA-HRKVLL 197 (386)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEE-CSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSC-SCEEEE
T ss_pred EEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEE-eCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC-ceEEee
Confidence 6899876554 66667788999998654321110 001112344555543 333 55556778888887654 222223
Q ss_pred eCcccceEEEEEeCCCCEEEEee-CC-CcEEEEeCCCCeEEEEEeC-CCeeE--EEEcCCCEEEEEc--CCcEEEEEcCC
Q 021744 147 EGHQKVVSGITLPSGSDKLYSGS-KD-ETVRVWDCASGQCAGVINL-GGEVG--CMISEGPWIFIGV--TNFVKAWNTQT 219 (308)
Q Consensus 147 ~~h~~~v~~~~~~~~~~~l~s~s-~d-g~v~~wd~~~~~~~~~~~~-~~~v~--~~~~~~~~l~~~~--d~~i~~wd~~~ 219 (308)
...-.....++++|.+..|+... .. +.|...++........... -.... ++.+++..|+.+. .+.|..+|+..
T Consensus 198 ~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 198 WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred cCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 33345678999998766654443 34 6788888774433322221 11122 3345666666543 67899999876
Q ss_pred Ccee-eeeCCCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCC
Q 021744 220 NTDL-SLSGPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 220 ~~~~-~~~~~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~ 259 (308)
.... .+.........|++..+ ++++-...+.|..++..++
T Consensus 278 ~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 278 SHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp CSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred CeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCC
Confidence 5443 23333456788888777 6677777889999986655
No 266
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.98 E-value=0.005 Score=51.05 Aligned_cols=173 Identities=12% Similarity=-0.009 Sum_probs=101.2
Q ss_pred eeeeeeecCCc-eEEeeCCCeEEEEEcCCCceeeeEeeC--------------------cccceEEEEEeC-CCCEEEEe
Q 021744 111 DILCRNWVQGN-CMYGEKCKFLHSWTVGDGFKLLTQLEG--------------------HQKVVSGITLPS-GSDKLYSG 168 (308)
Q Consensus 111 ~~~~~~~~~~~-~~~g~~d~~i~iwd~~~~~~~~~~~~~--------------------h~~~v~~~~~~~-~~~~l~s~ 168 (308)
...+.+.+++. +.++..++.|..|+..++. . ..+.. ....+..+++++ +++ |+.+
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~-~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~ 97 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSG-F-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIV 97 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTC-E-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEE
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCc-e-EEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEE
Confidence 34456677776 5677788999999987652 2 22210 113578899997 554 5555
Q ss_pred eCCCcEEEEeCCCCeEEEEEe---CC---CeeEEE--Ec-CCCEEEEEc------------------CCcEEEEEcCCCc
Q 021744 169 SKDETVRVWDCASGQCAGVIN---LG---GEVGCM--IS-EGPWIFIGV------------------TNFVKAWNTQTNT 221 (308)
Q Consensus 169 s~dg~v~~wd~~~~~~~~~~~---~~---~~v~~~--~~-~~~~l~~~~------------------d~~i~~wd~~~~~ 221 (308)
...+.+..+|..+++. ..+. .. .....+ .+ ++++.++.. ++.|..||..+++
T Consensus 98 d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp ETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred ECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 4455588888776542 2222 11 112223 46 677666542 2578889988776
Q ss_pred eeeeeCCCCCEEEEEEeCC--EE-EEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEe
Q 021744 222 DLSLSGPVGQVYAMAVGND--LL-FAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGS 290 (308)
Q Consensus 222 ~~~~~~~~~~v~~~~~~~~--~l-~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s 290 (308)
...+.........++++|+ .| ++-+..+.|..|++..... .....+..... ... ++.++|.+.++.
T Consensus 177 ~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~--~~~~~~~~~~g-P~gi~~d~~G~l~va~ 246 (322)
T 2fp8_A 177 TTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKK--GTAEVLVKIPN-PGNIKRNADGHFWVSS 246 (322)
T ss_dssp EEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTT--TCEEEEEECSS-EEEEEECTTSCEEEEE
T ss_pred EEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcC--CccceEEeCCC-CCCeEECCCCCEEEEe
Confidence 5533222234567999998 44 4446678999999875321 11111111112 444 888888866654
No 267
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.94 E-value=0.00091 Score=61.55 Aligned_cols=217 Identities=11% Similarity=0.030 Sum_probs=114.3
Q ss_pred eeEEec-CCCe-eeccCCC-----------cEEEEECCCCCCcccccceeeee--eeeeeeecCCce-EEee-CCCeEEE
Q 021744 71 AKRFAN-NTWG-RNNNFNN-----------HSNNYRAGNSKNSNINNRAVIKT--DILCRNWVQGNC-MYGE-KCKFLHS 133 (308)
Q Consensus 71 ~i~~s~-~g~~-~s~~~d~-----------~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~g~-~d~~i~i 133 (308)
..++.| +++. +.|+.+. .+.+||..+.+............ .....+..++.+ +.|+ .+..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 467777 7777 7776543 58889998775432211111111 222455667766 7777 4568999
Q ss_pred EEcCCCceeee--EeeCcccceEEEEEeCCCCEEEEee-CC-----CcEEEEeCCCCeEEEEE----e---CCCeeEEEE
Q 021744 134 WTVGDGFKLLT--QLEGHQKVVSGITLPSGSDKLYSGS-KD-----ETVRVWDCASGQCAGVI----N---LGGEVGCMI 198 (308)
Q Consensus 134 wd~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~s-~d-----g~v~~wd~~~~~~~~~~----~---~~~~v~~~~ 198 (308)
||+.+. +-.. .+.. ...-.++++.++++.++.|+ .+ ..+.+||..+.+-...- . .......+.
T Consensus 270 yd~~t~-~W~~~~~~~~-~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~ 347 (656)
T 1k3i_A 270 YDSSSD-SWIPGPDMQV-ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYR 347 (656)
T ss_dssp EEGGGT-EEEECCCCSS-CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGT
T ss_pred ecCcCC-ceeECCCCCc-cccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceee
Confidence 999876 2221 1211 11223455667888888888 44 57999999887643320 0 000000111
Q ss_pred cCCCEEEEE----------cCCcEEEEEcCCCceee-eeCC---------CCCEEEEEEeC--C-EEEEEcCCC------
Q 021744 199 SEGPWIFIG----------VTNFVKAWNTQTNTDLS-LSGP---------VGQVYAMAVGN--D-LLFAGTQDG------ 249 (308)
Q Consensus 199 ~~~~~l~~~----------~d~~i~~wd~~~~~~~~-~~~~---------~~~v~~~~~~~--~-~l~~g~~dg------ 249 (308)
.+++.++.+ ....+..||..+..... ...+ ...-.++.+.. + +++.|+.++
T Consensus 348 ~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~ 427 (656)
T 1k3i_A 348 SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDA 427 (656)
T ss_dssp TTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBC
T ss_pred cCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCc
Confidence 233333333 23467889988776431 1111 11234444432 3 677777532
Q ss_pred -----eEEEEEcCCCCcccccce--eccccCCCeEEEEecCCCeEEEee
Q 021744 250 -----AILAWKFNVTTNCFEPAA--SLKVHTDSNRAHFSRDVTSLLGSV 291 (308)
Q Consensus 250 -----~i~iwd~~~~~~~~~~~~--~~~~~~~~v~~~~s~d~~~l~~s~ 291 (308)
.|.+||..+... ..+. .+........+...|++++++..+
T Consensus 428 ~~~~~~v~~yd~~~~~W--~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG 474 (656)
T 1k3i_A 428 TTNAHIITLGEPGTSPN--TVFASNGLYFARTFHTSVVLPDGSTFITGG 474 (656)
T ss_dssp CCCEEEEECCSTTSCCE--EEECTTCCSSCCBSCEEEECTTSCEEEECC
T ss_pred CCcceEEEcCCCCCCCe--eEEccCCCCCCcccCCeEECCCCCEEEECC
Confidence 577787766432 2222 222111112225667888877554
No 268
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.84 E-value=0.0034 Score=58.66 Aligned_cols=182 Identities=10% Similarity=0.022 Sum_probs=104.9
Q ss_pred eeeeeee-cCCce-EEe-----eCCCeEEEEEcCCC-ceeeeEeeCcccceEEEEEeCCCCEEEEeeCC-----CcEEEE
Q 021744 111 DILCRNW-VQGNC-MYG-----EKCKFLHSWTVGDG-FKLLTQLEGHQKVVSGITLPSGSDKLYSGSKD-----ETVRVW 177 (308)
Q Consensus 111 ~~~~~~~-~~~~~-~~g-----~~d~~i~iwd~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d-----g~v~~w 177 (308)
+....++ |+|.. +.. +....|+++|+.++ ......+. .....++|+||++.|+....| ..|.++
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 5567899 99975 332 22246999999887 42222222 123578899999888776665 268888
Q ss_pred eCCCCeE--EEEEe--CCCeeE--EEEcCCCEEEEEc----CCcEEEEEcCCC--ce--eee-eCCCCCEEEEEEeCC--
Q 021744 178 DCASGQC--AGVIN--LGGEVG--CMISEGPWIFIGV----TNFVKAWNTQTN--TD--LSL-SGPVGQVYAMAVGND-- 240 (308)
Q Consensus 178 d~~~~~~--~~~~~--~~~~v~--~~~~~~~~l~~~~----d~~i~~wd~~~~--~~--~~~-~~~~~~v~~~~~~~~-- 240 (308)
++.+++. ...+. ...... .+++++++|+... ...|.++|+.++ +. ..+ ........++.|+..
T Consensus 253 ~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~ 332 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSH 332 (751)
T ss_dssp ETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTE
T ss_pred ECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCE
Confidence 9887642 23333 222222 3468899887433 337889999875 33 322 334456677776555
Q ss_pred EEEEEcCC----CeEEEEEcCCCCccccccee-ccccCCCeEE-EEecCCCeEEEee----ceEEEEee
Q 021744 241 LLFAGTQD----GAILAWKFNVTTNCFEPAAS-LKVHTDSNRA-HFSRDVTSLLGSV----SFIMFIGQ 299 (308)
Q Consensus 241 ~l~~g~~d----g~i~iwd~~~~~~~~~~~~~-~~~~~~~v~~-~~s~d~~~l~~s~----s~~i~~~~ 299 (308)
+++....+ ..|..+++.++ ..... +..+...+.. .+++++..|+.+. ...|++..
T Consensus 333 l~~~t~~~~a~~~~L~~~d~~~~----~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~d 397 (751)
T 2xe4_A 333 LVILTNEGGAVNHKLLIAPRGQP----SDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMM 397 (751)
T ss_dssp EEEEECTTTCTTCEEEEEETTST----TCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEE
T ss_pred EEEEeCCCCCCCcEEEEEcCCCc----ccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEe
Confidence 44444433 35666776542 11222 3334444454 6666677776443 33555544
No 269
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.79 E-value=0.012 Score=49.50 Aligned_cols=187 Identities=8% Similarity=-0.055 Sum_probs=111.8
Q ss_pred eeEEecCCCe--eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeec-CCce-EEeeCCCeEEEEEcCCCceeeeEe
Q 021744 71 AKRFANNTWG--RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWV-QGNC-MYGEKCKFLHSWTVGDGFKLLTQL 146 (308)
Q Consensus 71 ~i~~s~~g~~--~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~g~~d~~i~iwd~~~~~~~~~~~ 146 (308)
.++|.+.... ++-...+.|..++++.......... .......+++.+ .+.+ ++....+.|.+.++... .....+
T Consensus 77 ~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~-~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~-~~~~l~ 154 (349)
T 3v64_C 77 ALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST-GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA-HRKVLL 154 (349)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEE
T ss_pred EEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC-CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCC-ceEEEE
Confidence 6889876555 6666778899999865532211100 111234455654 3444 55556788999998755 222223
Q ss_pred eCcccceEEEEEeCCCCEEE-EeeCC-CcEEEEeCCCCeEEEEEe-CCCeeE--EEEcCCCEEEEEc--CCcEEEEEcCC
Q 021744 147 EGHQKVVSGITLPSGSDKLY-SGSKD-ETVRVWDCASGQCAGVIN-LGGEVG--CMISEGPWIFIGV--TNFVKAWNTQT 219 (308)
Q Consensus 147 ~~h~~~v~~~~~~~~~~~l~-s~s~d-g~v~~wd~~~~~~~~~~~-~~~~v~--~~~~~~~~l~~~~--d~~i~~wd~~~ 219 (308)
...-.....++++|.+..|+ +-... +.|...++.......... .-.... ++.+++..|..+. .+.|..+|+..
T Consensus 155 ~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 155 WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp CTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred eCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 33345678999998665554 44444 778888876432222112 111222 3345666666544 67899999876
Q ss_pred Cceee-eeCCCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCC
Q 021744 220 NTDLS-LSGPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 220 ~~~~~-~~~~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~ 259 (308)
..... +.........|++..+ ++++-...+.|..++..++
T Consensus 235 ~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 235 SHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp CSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred CceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCC
Confidence 54432 3333456788888766 6666677888988886555
No 270
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.71 E-value=0.015 Score=48.19 Aligned_cols=215 Identities=10% Similarity=-0.032 Sum_probs=125.9
Q ss_pred CCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc-eeEEecCCC-e-eeccCCCcEEEEECCCCCCcccccceeeee
Q 021744 34 RQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA-AKRFANNTW-G-RNNNFNNHSNNYRAGNSKNSNINNRAVIKT 110 (308)
Q Consensus 34 ~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~-~i~~s~~g~-~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~ 110 (308)
....|+..+....+. ....+..+-... .++|.+.+. . .+-...+.|..++++............-..
T Consensus 11 ~~~~I~~i~l~~~~~----------~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~ 80 (318)
T 3sov_A 11 NRRDLRLVDATNGKE----------NATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLS 80 (318)
T ss_dssp CEEEEEEEETTCTTS----------CCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSC
T ss_pred ccCeEEEEECCCCce----------EEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCC
Confidence 357888888776510 011111122223 788888544 4 676777889999986553211111111112
Q ss_pred eeeeeeec-CCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEee--CCCcEEEEeCCCCeEEE
Q 021744 111 DILCRNWV-QGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGS--KDETVRVWDCASGQCAG 186 (308)
Q Consensus 111 ~~~~~~~~-~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s--~dg~v~~wd~~~~~~~~ 186 (308)
...+++.+ .+.+ ++-...+.|.++++... .....+...-.....++++|.+..|+... ..+.|...++.......
T Consensus 81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~-~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~ 159 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGS-LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI 159 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred ccEEEEEcCCCeEEEEECCCCEEEEEECCCC-cEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEE
Confidence 44455654 3444 55556788999998754 22222223445678999998766665544 35788888876432222
Q ss_pred EEeCC-CeeE--EEEcCCCEEEEEc--CCcEEEEEcCCCceeee-eCCCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCC
Q 021744 187 VINLG-GEVG--CMISEGPWIFIGV--TNFVKAWNTQTNTDLSL-SGPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 187 ~~~~~-~~v~--~~~~~~~~l~~~~--d~~i~~wd~~~~~~~~~-~~~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~ 259 (308)
..... .... ++.+++..|+.+. .+.|..+|+.......+ .........+++..+ ++.+-...+.|..++..++
T Consensus 160 ~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 160 IINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred EEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCC
Confidence 22211 1222 3356666666544 67899999876544432 334456788888877 6667777889999998766
No 271
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.59 E-value=0.022 Score=47.07 Aligned_cols=187 Identities=6% Similarity=-0.105 Sum_probs=110.8
Q ss_pred eeEEecCCCe--eeccCCCcEEEEECCCC---CCcccccceeeeeeeeeeeec-CCce-EEeeCCCeEEEEEcCCCceee
Q 021744 71 AKRFANNTWG--RNNNFNNHSNNYRAGNS---KNSNINNRAVIKTDILCRNWV-QGNC-MYGEKCKFLHSWTVGDGFKLL 143 (308)
Q Consensus 71 ~i~~s~~g~~--~s~~~d~~i~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~-~~g~~d~~i~iwd~~~~~~~~ 143 (308)
.++|.+++.. ++-...+.|..++++.. .............+..+++.+ .+.. ++....+.|.+.++... ...
T Consensus 34 g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~-~~~ 112 (316)
T 1ijq_A 34 ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV-KRK 112 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS-SEE
T ss_pred EEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC-ceE
Confidence 6899987654 67667789999998651 111000100111244556654 3444 55567789999998754 222
Q ss_pred eEeeCcccceEEEEEeCCCCEEEEeeC-C-CcEEEEeCCCCeEEEEEe-C-CCeeE--EEEcCCCEEEEEc--CCcEEEE
Q 021744 144 TQLEGHQKVVSGITLPSGSDKLYSGSK-D-ETVRVWDCASGQCAGVIN-L-GGEVG--CMISEGPWIFIGV--TNFVKAW 215 (308)
Q Consensus 144 ~~~~~h~~~v~~~~~~~~~~~l~s~s~-d-g~v~~wd~~~~~~~~~~~-~-~~~v~--~~~~~~~~l~~~~--d~~i~~w 215 (308)
..+...-.....++++|.+..|+.+.. . +.|...++.. .....+. . -.... ++.+++..|+.+. .+.|..+
T Consensus 113 ~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~ 191 (316)
T 1ijq_A 113 TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSI 191 (316)
T ss_dssp EEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEE
Confidence 223333456789999997666554443 2 6788888763 3333332 1 12222 3345666666544 6799999
Q ss_pred EcCCCceeeee---CCCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCC
Q 021744 216 NTQTNTDLSLS---GPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 216 d~~~~~~~~~~---~~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~ 259 (308)
|+.......+. ........+++..+ ++++-...+.|..++..++
T Consensus 192 d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g 239 (316)
T 1ijq_A 192 DVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 239 (316)
T ss_dssp ETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred ecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCC
Confidence 99865443322 12345678888777 6667777889999997665
No 272
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.54 E-value=0.0031 Score=58.43 Aligned_cols=186 Identities=7% Similarity=-0.074 Sum_probs=104.9
Q ss_pred eeEEecCCCe--eeccCCCcEEEEECCC----CCCcccccceeeeeeeeeeee-cCCce-EEeeCCCeEEEEEcCCCcee
Q 021744 71 AKRFANNTWG--RNNNFNNHSNNYRAGN----SKNSNINNRAVIKTDILCRNW-VQGNC-MYGEKCKFLHSWTVGDGFKL 142 (308)
Q Consensus 71 ~i~~s~~g~~--~s~~~d~~i~vwd~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~g~~d~~i~iwd~~~~~~~ 142 (308)
.++|.+.+.. ++-...+.|+.++++. .... ............+++. ..+.+ ++....+.|.++++... ..
T Consensus 410 gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~-~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~-~~ 487 (699)
T 1n7d_A 410 ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD-TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV-KR 487 (699)
T ss_dssp CCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCC-CBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC-CE
T ss_pred EEccccccCeEEEEecCCCeEEEEecCCCCCCcceE-EEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC-ce
Confidence 6899986655 5656678899999865 1111 1111111123344554 33444 55556788999998765 22
Q ss_pred eeEeeCcccceEEEEEeCCCCEEEEeeC-C-CcEEEEeCCCCeEEEEEe---CCCee-EEEEcCCCEEE-EEc-CCcEEE
Q 021744 143 LTQLEGHQKVVSGITLPSGSDKLYSGSK-D-ETVRVWDCASGQCAGVIN---LGGEV-GCMISEGPWIF-IGV-TNFVKA 214 (308)
Q Consensus 143 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~-d-g~v~~wd~~~~~~~~~~~---~~~~v-~~~~~~~~~l~-~~~-d~~i~~ 214 (308)
...+.........++++|.+.+|+.... . +.|...++... ....+. ...+. .++.+++..|+ +-. .+.|..
T Consensus 488 ~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~-~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~ 566 (699)
T 1n7d_A 488 KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 566 (699)
T ss_dssp EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC-CCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEE
T ss_pred EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC-CeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEE
Confidence 2222222345678899986655544432 2 67877776532 222222 11121 23345555554 433 678999
Q ss_pred EEcCCCceeeee---CCCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCC
Q 021744 215 WNTQTNTDLSLS---GPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 215 wd~~~~~~~~~~---~~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~ 259 (308)
+|+.......+. ........|++..+ ++++....+.|..++..++
T Consensus 567 ~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G 615 (699)
T 1n7d_A 567 IDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 615 (699)
T ss_dssp ECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTE
T ss_pred EccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCC
Confidence 998764433322 12234456777777 6666677889999997765
No 273
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.43 E-value=0.049 Score=47.21 Aligned_cols=184 Identities=7% Similarity=0.014 Sum_probs=100.7
Q ss_pred eeEEecCCCe--eeccCCC----cEEEEECCCCCCcccccceeeeeeeeeeeec-CCce-EEeeCCCeEEEEEcCCCcee
Q 021744 71 AKRFANNTWG--RNNNFNN----HSNNYRAGNSKNSNINNRAVIKTDILCRNWV-QGNC-MYGEKCKFLHSWTVGDGFKL 142 (308)
Q Consensus 71 ~i~~s~~g~~--~s~~~d~----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~g~~d~~i~iwd~~~~~~~ 142 (308)
.++++++|+. ++-..++ .+.+.+. .+................+++.+ ++.+ ++...++.|..++..++ ..
T Consensus 183 ~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~-~~ 260 (430)
T 3tc9_A 183 TICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQ-ET 260 (430)
T ss_dssp EEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTT-EE
T ss_pred eEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCC-cE
Confidence 7999999994 4444332 2333333 22211000111112256677788 6665 55556789999999876 33
Q ss_pred eeEee-CcccceEEEEEeCCCCEE-EEeeCCCcEEEEeCCC--CeE--EEEEe-----------------CCCeeEEE-E
Q 021744 143 LTQLE-GHQKVVSGITLPSGSDKL-YSGSKDETVRVWDCAS--GQC--AGVIN-----------------LGGEVGCM-I 198 (308)
Q Consensus 143 ~~~~~-~h~~~v~~~~~~~~~~~l-~s~s~dg~v~~wd~~~--~~~--~~~~~-----------------~~~~v~~~-~ 198 (308)
..... +.......++|+|++++| ++-...+.|..++... ++. +..+. ...+...+ .
T Consensus 261 ~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v 340 (430)
T 3tc9_A 261 TPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFV 340 (430)
T ss_dssp EEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEE
T ss_pred EEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEE
Confidence 12221 112356789999999954 5555678899987653 322 12221 11122122 2
Q ss_pred c---------CCCEEEEEc-CCcEEEEEcCCCceeeeeCC------------------CCCEEEEEEeC-C--EEEEEcC
Q 021744 199 S---------EGPWIFIGV-TNFVKAWNTQTNTDLSLSGP------------------VGQVYAMAVGN-D--LLFAGTQ 247 (308)
Q Consensus 199 ~---------~~~~l~~~~-d~~i~~wd~~~~~~~~~~~~------------------~~~v~~~~~~~-~--~l~~g~~ 247 (308)
. ++.++++-. .+.|+.++ ..++...+.+. -.....|+++| + ++++-..
T Consensus 341 ~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~ 419 (430)
T 3tc9_A 341 KNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRE 419 (430)
T ss_dssp ECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGG
T ss_pred ccccccccCCCCeEEEEECCCcEEEEEC-CCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECC
Confidence 1 234444433 67888888 34554433321 12578899988 4 5555556
Q ss_pred CCeEEEEEcC
Q 021744 248 DGAILAWKFN 257 (308)
Q Consensus 248 dg~i~iwd~~ 257 (308)
.+.|+.++++
T Consensus 420 n~rIr~i~~e 429 (430)
T 3tc9_A 420 NRRIRKIGYE 429 (430)
T ss_dssp GTEEEEEEEC
T ss_pred CCeEEEEccC
Confidence 6778877754
No 274
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.42 E-value=0.032 Score=44.57 Aligned_cols=185 Identities=6% Similarity=0.017 Sum_probs=107.2
Q ss_pred eeEEecCCCe--eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCCCeEEEEEcCCCce--eeeE
Q 021744 71 AKRFANNTWG--RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTVGDGFK--LLTQ 145 (308)
Q Consensus 71 ~i~~s~~g~~--~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~--~~~~ 145 (308)
.+++.|++.. +....++.|...|.. ++........-......+++..++.+ ++.-.++.+.++++..... .+..
T Consensus 31 Gla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~ 109 (255)
T 3qqz_A 31 SLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKK 109 (255)
T ss_dssp EEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEE
T ss_pred eeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeee
Confidence 7999998765 666778888888886 54332211111122445566677766 4444667888988765422 1222
Q ss_pred ee------CcccceEEEEEeCCCCEEEEeeCCCcEEEEeCC---CCeEEEEEeC--------CCeeEEE--EcC-CCEEE
Q 021744 146 LE------GHQKVVSGITLPSGSDKLYSGSKDETVRVWDCA---SGQCAGVINL--------GGEVGCM--ISE-GPWIF 205 (308)
Q Consensus 146 ~~------~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~---~~~~~~~~~~--------~~~v~~~--~~~-~~~l~ 205 (308)
.. ........++|+|+++.|+++.+.....+|.+. ....+..+.. -.....+ .+. +++++
T Consensus 110 ~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lli 189 (255)
T 3qqz_A 110 IKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLV 189 (255)
T ss_dssp EECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEE
T ss_pred eccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEE
Confidence 21 123456899999998777777665555555543 1112222211 1122233 333 55666
Q ss_pred EEc-CCcEEEEEcCCCcee--eeeC-C------CCCEEEEEEeCC-EEEEEcCCCeEEEEEc
Q 021744 206 IGV-TNFVKAWNTQTNTDL--SLSG-P------VGQVYAMAVGND-LLFAGTQDGAILAWKF 256 (308)
Q Consensus 206 ~~~-d~~i~~wd~~~~~~~--~~~~-~------~~~v~~~~~~~~-~l~~g~~dg~i~iwd~ 256 (308)
.+. ++.+..+|....... .+.. . -.....|+|.++ .|...++-+.++.|.-
T Consensus 190 LS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~~ 251 (255)
T 3qqz_A 190 LSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTP 251 (255)
T ss_dssp EETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEEC
T ss_pred EECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEEe
Confidence 665 678889997755222 2321 1 136789999999 5555577776666643
No 275
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.41 E-value=0.048 Score=46.51 Aligned_cols=173 Identities=6% Similarity=-0.029 Sum_probs=103.2
Q ss_pred cCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCC-ce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCC
Q 021744 84 NFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQG-NC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSG 161 (308)
Q Consensus 84 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~ 161 (308)
+....|+..++...+.. ........+..+.+.+.+ .+ ++....+.|+.+++... .....+.........+++++.
T Consensus 93 ~~~~~I~~i~~~~~~~~--~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~-~~~~~~~~~~~~p~glavd~~ 169 (386)
T 3v65_B 93 ANRIDIRQVLPHRSEYT--LLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGS-NVEEVVSTGLESPGGLAVDWV 169 (386)
T ss_dssp ECBSCEEEECTTSCCCE--EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-CEEEEECSSCSCCCCEEEETT
T ss_pred ecCccceeeccCCCcEE--EEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCC-CcEEEEeCCCCCccEEEEEeC
Confidence 34456888887654322 111111235667777644 33 55556788999998866 333333323345578899976
Q ss_pred CCEE-EEeeCCCcEEEEeCCCCeEEEEEeCC-CeeEE--EEcCCCEEEEEc--C-CcEEEEEcCCCceeee-eCCCCCEE
Q 021744 162 SDKL-YSGSKDETVRVWDCASGQCAGVINLG-GEVGC--MISEGPWIFIGV--T-NFVKAWNTQTNTDLSL-SGPVGQVY 233 (308)
Q Consensus 162 ~~~l-~s~s~dg~v~~wd~~~~~~~~~~~~~-~~v~~--~~~~~~~l~~~~--d-~~i~~wd~~~~~~~~~-~~~~~~v~ 233 (308)
+..| ++-...+.|.+.++........+... ..... +.+.+..|+.+. . +.|..+++.......+ ...-....
T Consensus 170 ~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~Pn 249 (386)
T 3v65_B 170 HDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPN 249 (386)
T ss_dssp TTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEE
T ss_pred CCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCee
Confidence 5554 55556778988888754433333321 22233 345566666443 4 6899999876554433 23344678
Q ss_pred EEEEeCC---EEEEEcCCCeEEEEEcCCC
Q 021744 234 AMAVGND---LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 234 ~~~~~~~---~l~~g~~dg~i~iwd~~~~ 259 (308)
.|+++|+ ++++-+..+.|..+|+...
T Consensus 250 Glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (386)
T 3v65_B 250 GLTIDYAGRRMYWVDAKHHVIERANLDGS 278 (386)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEECTTSC
T ss_pred eEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 9999975 5555666788999998753
No 276
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.41 E-value=0.037 Score=45.15 Aligned_cols=183 Identities=11% Similarity=0.093 Sum_probs=94.9
Q ss_pred ecCCCe-eeccCC-----CcEEEEECCCCC---CcccccceeeeeeeeeeeecCCce-EEeeCC-----CeEEEEEcCCC
Q 021744 75 ANNTWG-RNNNFN-----NHSNNYRAGNSK---NSNINNRAVIKTDILCRNWVQGNC-MYGEKC-----KFLHSWTVGDG 139 (308)
Q Consensus 75 s~~g~~-~s~~~d-----~~i~vwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d-----~~i~iwd~~~~ 139 (308)
..++.. +.|+.+ ..+.+||..+.+ ............-..+... ++.+ +.|+.+ ..+.+||+.+.
T Consensus 60 ~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 60 SLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL-GDMIYVSGGFDGSRRHTSMERYDPNID 138 (301)
T ss_dssp EETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred EECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE-CCEEEEEcccCCCcccceEEEEcCCCC
Confidence 345666 777755 468899987665 2211111111111112222 4444 666643 46888998876
Q ss_pred c-eeeeEeeCcccceEEEEEeCCCCEEEEeeCC-----CcEEEEeCCCCeEEEEEeCCC---eeEEEEcCCCEEEEEc-C
Q 021744 140 F-KLLTQLEGHQKVVSGITLPSGSDKLYSGSKD-----ETVRVWDCASGQCAGVINLGG---EVGCMISEGPWIFIGV-T 209 (308)
Q Consensus 140 ~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d-----g~v~~wd~~~~~~~~~~~~~~---~v~~~~~~~~~l~~~~-d 209 (308)
. +.+..+...... .+++.. ++..++.|+.+ ..+.+||+.+.+-...-.... ...++..++++++.|. +
T Consensus 139 ~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~ 216 (301)
T 2vpj_A 139 QWSMLGDMQTAREG-AGLVVA-SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFD 216 (301)
T ss_dssp EEEEEEECSSCCBS-CEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBC
T ss_pred eEEECCCCCCCccc-ceEEEE-CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCC
Confidence 2 122222211111 122222 56667777654 468899998875443322111 1223345667767664 2
Q ss_pred -----CcEEEEEcCCCceeeeeCCC--CCEEEEEEeCC-EEEEEcCC-----CeEEEEEcCCCC
Q 021744 210 -----NFVKAWNTQTNTDLSLSGPV--GQVYAMAVGND-LLFAGTQD-----GAILAWKFNVTT 260 (308)
Q Consensus 210 -----~~i~~wd~~~~~~~~~~~~~--~~v~~~~~~~~-~l~~g~~d-----g~i~iwd~~~~~ 260 (308)
..+.+||+.+.+-..+.... ..-.+++...+ +++.|+.+ ..|.+||..+.+
T Consensus 217 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 217 GTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp SSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 46899999988655332111 11123333455 66666654 357788887653
No 277
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.34 E-value=0.046 Score=44.83 Aligned_cols=184 Identities=10% Similarity=0.001 Sum_probs=99.1
Q ss_pred eeeeeeecCCce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCC--cEEEEeCCCCeEEEE
Q 021744 111 DILCRNWVQGNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDE--TVRVWDCASGQCAGV 187 (308)
Q Consensus 111 ~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg--~v~~wd~~~~~~~~~ 187 (308)
...+.+.+++.+ ++...++.|..||.... ....+. -...+..++++++++++++..... .|..+|..+++....
T Consensus 34 pegia~~~~g~lyv~d~~~~~I~~~d~~g~--~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~ 110 (306)
T 2p4o_A 34 LENLASAPDGTIFVTNHEVGEIVSITPDGN--QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL 110 (306)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTCC--EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred cceEEECCCCCEEEEeCCCCeEEEECCCCc--eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEE
Confidence 344566677766 44446788988987754 222222 234678999999998666554332 477778787775443
Q ss_pred EeCC--CeeE--EEEcCCCEEEEEc-CCcEEEEEcCCCcee-e-ee---------CCCCCEEEEEEeCC-EEEEEcCCCe
Q 021744 188 INLG--GEVG--CMISEGPWIFIGV-TNFVKAWNTQTNTDL-S-LS---------GPVGQVYAMAVGND-LLFAGTQDGA 250 (308)
Q Consensus 188 ~~~~--~~v~--~~~~~~~~l~~~~-d~~i~~wd~~~~~~~-~-~~---------~~~~~v~~~~~~~~-~l~~g~~dg~ 250 (308)
.... .... +.++++..+++.. ++.|..+|..+++.. . .. ..-.....+..... ++++-+..+.
T Consensus 111 ~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~ 190 (306)
T 2p4o_A 111 LTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKML 190 (306)
T ss_dssp EECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTE
T ss_pred EeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCE
Confidence 3321 1111 2233344444443 789999998765321 1 00 11124555632223 5566677889
Q ss_pred EEEEEcCC-CCcccccceeccccCCCeEEEEecCCCeEEEee-ceEEEEee
Q 021744 251 ILAWKFNV-TTNCFEPAASLKVHTDSNRAHFSRDVTSLLGSV-SFIMFIGQ 299 (308)
Q Consensus 251 i~iwd~~~-~~~~~~~~~~~~~~~~~v~~~~s~d~~~l~~s~-s~~i~~~~ 299 (308)
|..|++.. +.. .....+.....+-..++.++|.+.++.. ...|....
T Consensus 191 I~~~~~~~~g~~--~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~ 239 (306)
T 2p4o_A 191 LLRIPVDSTDKP--GEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIA 239 (306)
T ss_dssp EEEEEBCTTSCB--CCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEEC
T ss_pred EEEEEeCCCCCC--CccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEEC
Confidence 99999875 211 1112221111122226778887655543 33344433
No 278
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.33 E-value=0.047 Score=44.68 Aligned_cols=227 Identities=9% Similarity=0.015 Sum_probs=114.2
Q ss_pred CceEEecC--CCeEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCe-eeccCC----CcEEEEECCCCCC
Q 021744 27 GLSTADTR--QKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWG-RNNNFN----NHSNNYRAGNSKN 99 (308)
Q Consensus 27 ~~~~s~s~--d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~-~s~~~d----~~i~vwd~~~~~~ 99 (308)
.+++.|+. ...+.++|..+...... .+.+.+..+|. +...++.. +.|+.+ ..+.+||..+.+.
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~------~~~p~~r~~~~----~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W 82 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDI------RCPFEKRRDAA----CVFWDNVVYILGGSQLFPIKRMDCYNVVKDSW 82 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEEC------CCCSCCCBSCE----EEEETTEEEEECCBSSSBCCEEEEEETTTTEE
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecC------CCCCcccceeE----EEEECCEEEEEeCCCCCCcceEEEEeCCCCeE
Confidence 34555554 35778888776521111 12233333332 22345666 777755 6688888876643
Q ss_pred cccccceeeeeeeeeeeecCCce-EEeeCC------CeEEEEEcCCCc-eeeeEeeCcccceEEEEEeCCCCEEEEeeC-
Q 021744 100 SNINNRAVIKTDILCRNWVQGNC-MYGEKC------KFLHSWTVGDGF-KLLTQLEGHQKVVSGITLPSGSDKLYSGSK- 170 (308)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d------~~i~iwd~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~- 170 (308)
...........-..+.. .++.+ +.|+.+ ..+.+||+.+.. +.+..+...... .+++.. ++..++.|+.
T Consensus 83 ~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~ 159 (306)
T 3ii7_A 83 YSKLGPPTPRDSLAACA-AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCS-HGMVEA-NGLIYVCGGSL 159 (306)
T ss_dssp EEEECCSSCCBSCEEEE-ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEE-TTEEEEECCEE
T ss_pred EECCCCCccccceeEEE-ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcce-eEEEEE-CCEEEEECCCC
Confidence 21111111111111222 24444 777755 568899988762 111111111111 122222 5566666653
Q ss_pred --------CCcEEEEeCCCCeEEEEEeCCC---eeEEEEcCCCEEEEEc-C-----CcEEEEEcCCCceeeee---CCCC
Q 021744 171 --------DETVRVWDCASGQCAGVINLGG---EVGCMISEGPWIFIGV-T-----NFVKAWNTQTNTDLSLS---GPVG 230 (308)
Q Consensus 171 --------dg~v~~wd~~~~~~~~~~~~~~---~v~~~~~~~~~l~~~~-d-----~~i~~wd~~~~~~~~~~---~~~~ 230 (308)
-..+.+||+.+.+-...-.... ...++..++++++.|. + ..+.+||+.+.+-..+. ....
T Consensus 160 ~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~ 239 (306)
T 3ii7_A 160 GNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGV 239 (306)
T ss_dssp SCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBS
T ss_pred CCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCcc
Confidence 3458899998875433222111 1223344667776654 2 46899999987655332 1122
Q ss_pred CEEEEEEeCC-EEEEEcCC-----CeEEEEEcCCCCcccccceec
Q 021744 231 QVYAMAVGND-LLFAGTQD-----GAILAWKFNVTTNCFEPAASL 269 (308)
Q Consensus 231 ~v~~~~~~~~-~l~~g~~d-----g~i~iwd~~~~~~~~~~~~~~ 269 (308)
... ++...+ +++.|+.+ ..+.+||..+.+. +.+..+
T Consensus 240 ~~~-~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W--~~~~~~ 281 (306)
T 3ii7_A 240 TVK-CAAVGSIVYVLAGFQGVGRLGHILEYNTETDKW--VANSKV 281 (306)
T ss_dssp CCE-EEEETTEEEEEECBCSSSBCCEEEEEETTTTEE--EEEEEE
T ss_pred cee-EEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeE--EeCCCc
Confidence 223 333355 66677643 4688899887642 444443
No 279
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.33 E-value=0.063 Score=46.02 Aligned_cols=188 Identities=6% Similarity=-0.082 Sum_probs=112.0
Q ss_pred eeEEecCCCe--eeccCCCcEEEEECCCCCC---cccccceeeeeeeeeeeec-CCce-EEeeCCCeEEEEEcCCCceee
Q 021744 71 AKRFANNTWG--RNNNFNNHSNNYRAGNSKN---SNINNRAVIKTDILCRNWV-QGNC-MYGEKCKFLHSWTVGDGFKLL 143 (308)
Q Consensus 71 ~i~~s~~g~~--~s~~~d~~i~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~-~~g~~d~~i~iwd~~~~~~~~ 143 (308)
.++|.+.+.. ++-...+.|+.++++.... ..............+++.. .+.+ ++....+.|.+.++... ...
T Consensus 116 ~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~-~~~ 194 (400)
T 3p5b_L 116 ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV-KRK 194 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTC-SEE
T ss_pred EEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCC-ceE
Confidence 7899986554 6666778898898864221 0000110111244455554 3444 55666788999988765 333
Q ss_pred eEeeCcccceEEEEEeCCCCEEEEeeC--CCcEEEEeCCCCeEEEEEeCC-CeeEE--EEcCCCEEEEEc--CCcEEEEE
Q 021744 144 TQLEGHQKVVSGITLPSGSDKLYSGSK--DETVRVWDCASGQCAGVINLG-GEVGC--MISEGPWIFIGV--TNFVKAWN 216 (308)
Q Consensus 144 ~~~~~h~~~v~~~~~~~~~~~l~s~s~--dg~v~~wd~~~~~~~~~~~~~-~~v~~--~~~~~~~l~~~~--d~~i~~wd 216 (308)
..+...-.....++++|.+..|+.... .+.|...++........+... ..... +.+++..|+.+. .+.|..+|
T Consensus 195 ~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d 274 (400)
T 3p5b_L 195 TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSID 274 (400)
T ss_dssp EEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEe
Confidence 333333456789999997666654442 368888888744333333211 22333 345667666554 67899999
Q ss_pred cCCCceeeee---CCCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCC
Q 021744 217 TQTNTDLSLS---GPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 217 ~~~~~~~~~~---~~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~ 259 (308)
+.......+. ........+++..+ ++.+-...+.|..+|..++
T Consensus 275 ~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G 321 (400)
T 3p5b_L 275 VNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 321 (400)
T ss_dssp TTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSC
T ss_pred CCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCC
Confidence 8765544322 22345678888777 6677777888999997666
No 280
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.25 E-value=0.058 Score=43.99 Aligned_cols=181 Identities=12% Similarity=0.155 Sum_probs=92.7
Q ss_pred CCCe-eeccCC-----CcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCC-----CeEEEEEcCCCc-eee
Q 021744 77 NTWG-RNNNFN-----NHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKC-----KFLHSWTVGDGF-KLL 143 (308)
Q Consensus 77 ~g~~-~s~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d-----~~i~iwd~~~~~-~~~ 143 (308)
++.. +.|+.+ ..+.+||..+.+............-..+.. .++.. +.|+.+ ..+.+||+.+.. +.+
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 139 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV 139 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeec
Confidence 5556 777754 357888887654321111111111111222 24444 667654 357788887762 111
Q ss_pred eEeeCcccceEEEEEeCCCCEEEEeeCC-------CcEEEEeCCCCeEEEEEeCCC---eeEEEEcCCCEEEEEc-C---
Q 021744 144 TQLEGHQKVVSGITLPSGSDKLYSGSKD-------ETVRVWDCASGQCAGVINLGG---EVGCMISEGPWIFIGV-T--- 209 (308)
Q Consensus 144 ~~~~~h~~~v~~~~~~~~~~~l~s~s~d-------g~v~~wd~~~~~~~~~~~~~~---~v~~~~~~~~~l~~~~-d--- 209 (308)
..+...... .+++.. ++..++.|+.+ ..+.+||+.+.+-...-.... ...++..++++++.|. +
T Consensus 140 ~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 217 (302)
T 2xn4_A 140 APMNTRRSS-VGVGVV-GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPL 217 (302)
T ss_dssp CCCSSCCBS-CEEEEE-TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSS
T ss_pred CCCCCcccC-ceEEEE-CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCc
Confidence 112211111 222222 45666666543 358899998775443322111 1223345677777664 3
Q ss_pred --CcEEEEEcCCCceeeeeCCCC--CEEEEEEeCC-EEEEEcCCC-----eEEEEEcCCCC
Q 021744 210 --NFVKAWNTQTNTDLSLSGPVG--QVYAMAVGND-LLFAGTQDG-----AILAWKFNVTT 260 (308)
Q Consensus 210 --~~i~~wd~~~~~~~~~~~~~~--~v~~~~~~~~-~l~~g~~dg-----~i~iwd~~~~~ 260 (308)
..+.+||+.+.+-..+..... .-.+++...+ +++.|+.++ .+.+||..+.+
T Consensus 218 ~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 218 VRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred ccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 368999999876553322111 1122334455 666666543 48899988754
No 281
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.19 E-value=0.097 Score=45.39 Aligned_cols=184 Identities=10% Similarity=0.048 Sum_probs=96.8
Q ss_pred eeEEecCCCe-eeccCC---Cc-EEEEECCCCCCcccccceeeeeeeeeeeec-CCce-EEeeCCCeEEEEEcCCCceee
Q 021744 71 AKRFANNTWG-RNNNFN---NH-SNNYRAGNSKNSNINNRAVIKTDILCRNWV-QGNC-MYGEKCKFLHSWTVGDGFKLL 143 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d---~~-i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~g~~d~~i~iwd~~~~~~~~ 143 (308)
.++++++|.+ ++-... .. +...+...+ .........-.....+++.+ ++.+ ++...++.|+.++..++ ...
T Consensus 186 giavd~dG~lyVad~~~~~~~~gv~~~~~~~~-~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g-~~~ 263 (433)
T 4hw6_A 186 DVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG-FTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATG-TLT 263 (433)
T ss_dssp EEEECTTCCEEEEECCSCTTSEEEEEECGGGT-TCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTC-CEE
T ss_pred EEEECCCCCEEEEcCCCCcccceEEEEECCCC-eeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCC-eEE
Confidence 7999999998 554422 11 222222211 11000111112245566777 6666 44456788999998866 332
Q ss_pred eEe-e-CcccceEEEEEeCCCCEE-EEeeCCCcEEEEeCC--CCeE--EEEEe-C----------------CCeeEEEE-
Q 021744 144 TQL-E-GHQKVVSGITLPSGSDKL-YSGSKDETVRVWDCA--SGQC--AGVIN-L----------------GGEVGCMI- 198 (308)
Q Consensus 144 ~~~-~-~h~~~v~~~~~~~~~~~l-~s~s~dg~v~~wd~~--~~~~--~~~~~-~----------------~~~v~~~~- 198 (308)
..+ . +....-..++|+|+++.| ++-...+.|+.+++. +++. ...+. . ..+.....
T Consensus 264 ~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~ 343 (433)
T 4hw6_A 264 EEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFV 343 (433)
T ss_dssp EEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEE
T ss_pred EEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEE
Confidence 222 1 112233469999999855 555567889998765 3321 11221 1 11221222
Q ss_pred --------c-CCCEEEEEc-CCcEEEEEcCCCceeeeeCC------------------CCCEEEEEEe-CC--EEEEEcC
Q 021744 199 --------S-EGPWIFIGV-TNFVKAWNTQTNTDLSLSGP------------------VGQVYAMAVG-ND--LLFAGTQ 247 (308)
Q Consensus 199 --------~-~~~~l~~~~-d~~i~~wd~~~~~~~~~~~~------------------~~~v~~~~~~-~~--~l~~g~~ 247 (308)
. ++.++++-. .+.|+.++. ++...++.+. -.....|+++ ++ ++++=..
T Consensus 344 ~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~ 422 (433)
T 4hw6_A 344 KNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCD 422 (433)
T ss_dssp ECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGG
T ss_pred ccccccccCCCCcEEEEECCCCEEEEECC-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCC
Confidence 2 334444444 668888885 4544443321 1236788888 44 4555555
Q ss_pred CCeEEEEEcC
Q 021744 248 DGAILAWKFN 257 (308)
Q Consensus 248 dg~i~iwd~~ 257 (308)
.++|+.++++
T Consensus 423 n~rIr~i~~e 432 (433)
T 4hw6_A 423 NHRVRKIAPE 432 (433)
T ss_dssp GTEEEEEEEC
T ss_pred CCEEEEEecC
Confidence 6777777654
No 282
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.11 E-value=0.093 Score=43.79 Aligned_cols=195 Identities=12% Similarity=0.115 Sum_probs=112.5
Q ss_pred eeEEecCC---Ce-eeccCCCcEEEEECCCCCCcccccceeeee--eeeeeeecCCc---e--EEeeC--CCeEEEEEcC
Q 021744 71 AKRFANNT---WG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKT--DILCRNWVQGN---C--MYGEK--CKFLHSWTVG 137 (308)
Q Consensus 71 ~i~~s~~g---~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~--~~g~~--d~~i~iwd~~ 137 (308)
+++.+|.. .. +.....+-+.+||+ +++.+.....+.-.. +.. .|...+. . ++.-. ++.|.+|++.
T Consensus 30 avw~~~~dp~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~g~~nnVD~r~-~~~l~g~~~dla~as~R~~~~n~l~vf~iD 107 (355)
T 3amr_A 30 AIWLDPKTPQNSKLITTNKKSGLVVYSL-DGKMLHSYNTGKLNNVDIRY-DFPLNGKKVDIAAASNRSEGKNTIEIYAID 107 (355)
T ss_dssp EEECCSSCGGGCEEEEEETTTEEEEEET-TSCEEEEECCSCEEEEEEEE-EEEETTEEEEEEEEEECSTTCCEEEEEEEC
T ss_pred cEecCCCCCCccEEEEEcCCCCEEEEcC-CCcEEEEccCCCcccEEEec-ccccCCceEeEEEEeCCCCCCCeEEEEEEC
Confidence 78887752 33 44455677999999 565543322111111 111 2322332 2 22333 5889999774
Q ss_pred CCceeeeEeeC------cc-cceEEEEE--eCC-CC-EEEEeeCCCcEEEEeCC-------CCeEEEEEeCCCeeEEE-E
Q 021744 138 DGFKLLTQLEG------HQ-KVVSGITL--PSG-SD-KLYSGSKDETVRVWDCA-------SGQCAGVINLGGEVGCM-I 198 (308)
Q Consensus 138 ~~~~~~~~~~~------h~-~~v~~~~~--~~~-~~-~l~s~s~dg~v~~wd~~-------~~~~~~~~~~~~~v~~~-~ 198 (308)
.....+..+.. .. ..+..+++ +|. +. +++....+|.+..|++. +.+.++++.....+..+ .
T Consensus 108 p~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~Egcvv 187 (355)
T 3amr_A 108 GKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAA 187 (355)
T ss_dssp TTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEE
T ss_pred CCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEE
Confidence 22122444421 11 56677887 664 43 67888889999999883 34677888866655443 3
Q ss_pred -cCCCEEEEEc-CCcEEEEEcC-----CCceeeee--CC-CCCEEEEEEe--CC---EEEEEc-CCCeEEEEEcCCCCcc
Q 021744 199 -SEGPWIFIGV-TNFVKAWNTQ-----TNTDLSLS--GP-VGQVYAMAVG--ND---LLFAGT-QDGAILAWKFNVTTNC 262 (308)
Q Consensus 199 -~~~~~l~~~~-d~~i~~wd~~-----~~~~~~~~--~~-~~~v~~~~~~--~~---~l~~g~-~dg~i~iwd~~~~~~~ 262 (308)
+....|+++. +..|..+|.+ +.+.+... ++ ...+..|++- ++ +|++++ .+....+||....
T Consensus 188 Dd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~--- 264 (355)
T 3amr_A 188 DDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGK--- 264 (355)
T ss_dssp ETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTT---
T ss_pred cCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCC---
Confidence 4567777776 5567777755 23344222 22 2367888874 43 555555 6779999999732
Q ss_pred cccceecc
Q 021744 263 FEPAASLK 270 (308)
Q Consensus 263 ~~~~~~~~ 270 (308)
.+.+..+.
T Consensus 265 ~~~vg~f~ 272 (355)
T 3amr_A 265 NKYVADFR 272 (355)
T ss_dssp CCEEEEEE
T ss_pred CcEEEEEE
Confidence 14555553
No 283
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.07 E-value=0.097 Score=43.19 Aligned_cols=173 Identities=10% Similarity=0.024 Sum_probs=101.8
Q ss_pred CCCcEEEEECCCCCCcccccceeeeeeeeeeeecCC-ce-EEeeCCCeEEEEEcCCC---ceeeeEeeCcccceEEEEEe
Q 021744 85 FNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQG-NC-MYGEKCKFLHSWTVGDG---FKLLTQLEGHQKVVSGITLP 159 (308)
Q Consensus 85 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~g~~d~~i~iwd~~~~---~~~~~~~~~h~~~v~~~~~~ 159 (308)
....|+..|+++.+... .......+..+.+.+.+ .. ++....+.|+.+++... ......+...-.....++++
T Consensus 8 ~~~~I~~i~~~~~~~~~--~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd 85 (316)
T 1ijq_A 8 NRHEVRKMTLDRSEYTS--LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 85 (316)
T ss_dssp CBSSEEEEETTSCCCEE--EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred CCCeEEEEECCCcceEe--hhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEe
Confidence 34568888887654321 11112235667777654 33 55566789999998761 12222232223456789998
Q ss_pred CCCCEE-EEeeCCCcEEEEeCCCCeEEEEEe-CCCeeEEE--EcCCCEEEEE-c-C-CcEEEEEcCCCceeee-eCCCCC
Q 021744 160 SGSDKL-YSGSKDETVRVWDCASGQCAGVIN-LGGEVGCM--ISEGPWIFIG-V-T-NFVKAWNTQTNTDLSL-SGPVGQ 231 (308)
Q Consensus 160 ~~~~~l-~s~s~dg~v~~wd~~~~~~~~~~~-~~~~v~~~--~~~~~~l~~~-~-d-~~i~~wd~~~~~~~~~-~~~~~~ 231 (308)
+.+..| ++-...+.|.+.++........+. .......+ .+.+..|+.+ . . +.|..+++.......+ ...-..
T Consensus 86 ~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~ 165 (316)
T 1ijq_A 86 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQW 165 (316)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSC
T ss_pred ecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCC
Confidence 755554 555667899999987544333333 21223333 4556655543 3 3 6888888875544333 223456
Q ss_pred EEEEEEeCC---EEEEEcCCCeEEEEEcCCC
Q 021744 232 VYAMAVGND---LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 232 v~~~~~~~~---~l~~g~~dg~i~iwd~~~~ 259 (308)
...|+++++ ++++-+..+.|..+|+...
T Consensus 166 P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 166 PNGITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (316)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ceEEEEeccCCEEEEEECCCCeEEEEecCCC
Confidence 889999976 4555566789999999753
No 284
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.05 E-value=0.098 Score=42.97 Aligned_cols=213 Identities=8% Similarity=-0.046 Sum_probs=104.1
Q ss_pred CeEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCe-eeccC-----C------CcEEEEECCCCCCcccc
Q 021744 36 KVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWG-RNNNF-----N------NHSNNYRAGNSKNSNIN 103 (308)
Q Consensus 36 ~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~-~s~~~-----d------~~i~vwd~~~~~~~~~~ 103 (308)
..+..+|..+.... ....|.+.+..+| .+...++.. +.|+. . ..+.+||..+.+.....
T Consensus 13 ~~~~~yd~~~~~W~-----~~~~~~p~~r~~~----~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 13 EGAVAYDPAANECY-----CASLSSQVPKNHV----SLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp TEEEEEETTTTEEE-----EEECCCCSCSSEE----EEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred CceEEECCCCCeEe-----cCCCCCCCCccce----EEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 57888888775211 1222323333333 233456666 77763 1 12667787665432111
Q ss_pred cceeeeeeeeeeeecCCce-EEeeCC--------CeEEEEEcCCCc-eeeeEeeCcccceEEEEEeCCCCEEEEeeC-C-
Q 021744 104 NRAVIKTDILCRNWVQGNC-MYGEKC--------KFLHSWTVGDGF-KLLTQLEGHQKVVSGITLPSGSDKLYSGSK-D- 171 (308)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~-~~g~~d--------~~i~iwd~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-d- 171 (308)
.......-..+... ++.+ +.|+.+ ..+.+||+.+.. +.+..+...... .+++. .+++.++.|+. +
T Consensus 84 ~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~ 160 (315)
T 4asc_A 84 PLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYG-HTVLS-HMDLVYVIGGKGSD 160 (315)
T ss_dssp CBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEE-ETTEEEEECCBCTT
T ss_pred CCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccc-eeEEE-ECCEEEEEeCCCCC
Confidence 11111111112222 3433 666632 468899988762 112122211111 12222 34566677765 2
Q ss_pred ----CcEEEEeCCCCeEEEEEeCCC---eeEEEEcCCCEEEEEc-CC-----cEEEEEcCCCceeeeeCCC--CCEEEEE
Q 021744 172 ----ETVRVWDCASGQCAGVINLGG---EVGCMISEGPWIFIGV-TN-----FVKAWNTQTNTDLSLSGPV--GQVYAMA 236 (308)
Q Consensus 172 ----g~v~~wd~~~~~~~~~~~~~~---~v~~~~~~~~~l~~~~-d~-----~i~~wd~~~~~~~~~~~~~--~~v~~~~ 236 (308)
..+.+||+.+.+-...-..+. ...+...++++++.|. ++ .+.+||+.+.+-..+.... ..-.+++
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 240 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLV 240 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred CcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEE
Confidence 468899998775332212111 1223345677766654 32 5889999888655332211 1112333
Q ss_pred EeCC-EEEEEcCC--------------CeEEEEEcCCCC
Q 021744 237 VGND-LLFAGTQD--------------GAILAWKFNVTT 260 (308)
Q Consensus 237 ~~~~-~l~~g~~d--------------g~i~iwd~~~~~ 260 (308)
...+ +++.|+.+ ..+.+||+.+.+
T Consensus 241 ~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 241 SLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred EECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 4455 55666543 236788887753
No 285
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.04 E-value=0.1 Score=43.02 Aligned_cols=199 Identities=7% Similarity=0.024 Sum_probs=116.4
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCc
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGH 149 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h 149 (308)
+.-.+|..+. |.-+ ..+++|+|+++.+.+.... ....+..-.|-..... .--.+..|+-|++.....+.+.+.-|
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~klks~~--~~e~VvfWkWis~~~L-~lVT~taVyHWs~~~~s~P~kvFdR~ 146 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT--MTDDVTFWKWISLNTV-ALVTDNAVYHWSMEGESQPVKMFDRH 146 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEE--CSSCEEEEEECSSSEE-EEEESSEEEEEESSTTCCCEEEEECC
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhhhhccee--cCCccEEEEecCCCeE-EEEcCCcEEEEcccCCCCCceeeecc
Confidence 4566898887 5444 7889999998775542211 1123444444444433 11235689999998654667666655
Q ss_pred c----cceEEEEEeCCCCEEEEeeC-------CCcEEEEeCCCCeEEEEEe-CCCeeEEEEcCC-----CEEEEEc----
Q 021744 150 Q----KVVSGITLPSGSDKLYSGSK-------DETVRVWDCASGQCAGVIN-LGGEVGCMISEG-----PWIFIGV---- 208 (308)
Q Consensus 150 ~----~~v~~~~~~~~~~~l~s~s~-------dg~v~~wd~~~~~~~~~~~-~~~~v~~~~~~~-----~~l~~~~---- 208 (308)
. ..|.....+++.++++..+- .|.+.+|..+.+.. +.+. |......+-.++ ++++.+.
T Consensus 147 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~ 225 (365)
T 2xzh_A 147 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 225 (365)
T ss_dssp GGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEE-EEECCSEEEEEEECCTTCSSCEEEEEEEEEETT
T ss_pred hhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccccc-ceeeeeeeeeEEEecCCCCCCceEEEEEEecCC
Confidence 3 45677777888888654432 36777888775432 2222 222222221121 2333222
Q ss_pred CCcEEEEEcCCC---c------eeeee----CCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccC
Q 021744 209 TNFVKAWNTQTN---T------DLSLS----GPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHT 273 (308)
Q Consensus 209 d~~i~~wd~~~~---~------~~~~~----~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 273 (308)
.+.+++.++... . ...+. ...+-..++.+++. .+..-+.-|.|++||++++ .++..-+-..
T Consensus 226 g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTg----t~i~~nrIS~ 301 (365)
T 2xzh_A 226 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG----TCIYMNRISG 301 (365)
T ss_dssp EEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTC----CEEEEEECCS
T ss_pred CcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccC----cEEEEeccCC
Confidence 258899988443 1 11111 12455678889988 7777788899999999998 5555444444
Q ss_pred CCeEE
Q 021744 274 DSNRA 278 (308)
Q Consensus 274 ~~v~~ 278 (308)
..|-.
T Consensus 302 d~iF~ 306 (365)
T 2xzh_A 302 ETIFV 306 (365)
T ss_dssp SCEEE
T ss_pred CceEE
Confidence 45544
No 286
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.02 E-value=0.19 Score=45.82 Aligned_cols=216 Identities=7% Similarity=-0.050 Sum_probs=127.1
Q ss_pred cCCCeEEEeecCCCCCCCCCcccccCCCCCCccccccc-eeEEecCCCe--eeccCCCcEEEEECCCCCCcccccceeee
Q 021744 33 TRQKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAA-AKRFANNTWG--RNNNFNNHSNNYRAGNSKNSNINNRAVIK 109 (308)
Q Consensus 33 s~d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~-~i~~s~~g~~--~s~~~d~~i~vwd~~~~~~~~~~~~~~~~ 109 (308)
+....|+.-+....+. ....|..+-..+ .++|.+.+.. ++-..++.|+.++++........... ..
T Consensus 12 s~~~~I~~i~l~~~~~----------~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g-~~ 80 (628)
T 4a0p_A 12 SRRADIRRISLETNNN----------NVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFG-LD 80 (628)
T ss_dssp EETTEEEEEESSCTTC----------EEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS-CS
T ss_pred EeCCcEEEEECCCCCc----------ceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCC-CC
Confidence 3667888888765410 001122222233 7999987665 67677888999988644221111111 11
Q ss_pred eeeeeeeecC-Cce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEee--CCCcEEEEeCCCCeEE
Q 021744 110 TDILCRNWVQ-GNC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGS--KDETVRVWDCASGQCA 185 (308)
Q Consensus 110 ~~~~~~~~~~-~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s--~dg~v~~wd~~~~~~~ 185 (308)
.+..+++... +.. ++....+.|.+.++.... ....+...-.....++++|....|+-.. ..+.|...++......
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~-~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~ 159 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH-RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT 159 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSTT-CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCCCc-EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE
Confidence 2444555433 334 555667889999987552 2222223445678999998655665444 2567777887654433
Q ss_pred EEEeCCCeeEEE--EcCCCEEEEEc--CCcEEEEEcCCCceeeeeCCCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCCC
Q 021744 186 GVINLGGEVGCM--ISEGPWIFIGV--TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVTT 260 (308)
Q Consensus 186 ~~~~~~~~v~~~--~~~~~~l~~~~--d~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~ 260 (308)
.....-.....+ .++++.|+.+. .+.|..+|+.......+.........+++..+ ++++-...+.|...|..+++
T Consensus 160 ~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 160 TLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEECCEEEEecCCCCEEEEEECCCCC
Confidence 333322223333 45566666554 67899999976544433334445678888888 66666678899999976653
No 287
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.99 E-value=0.13 Score=43.27 Aligned_cols=231 Identities=10% Similarity=0.052 Sum_probs=119.0
Q ss_pred eeEEecCCCe-eec------------cCCCcEEEEECCCC--CCcccccce--ee---eeeeeeeeec--CCc--e-EEe
Q 021744 71 AKRFANNTWG-RNN------------NFNNHSNNYRAGNS--KNSNINNRA--VI---KTDILCRNWV--QGN--C-MYG 125 (308)
Q Consensus 71 ~i~~s~~g~~-~s~------------~~d~~i~vwd~~~~--~~~~~~~~~--~~---~~~~~~~~~~--~~~--~-~~g 125 (308)
.+++.|+|.. +++ ..+|.|.++|.++. +........ .. ....-+.+.+ ++. + +.-
T Consensus 54 Di~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvn 133 (355)
T 3sre_A 54 DLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVN 133 (355)
T ss_dssp EEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEE
T ss_pred eeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEE
Confidence 5778888766 443 26899999998633 211111111 10 1233344444 342 2 221
Q ss_pred e--CCCeEEEEEcCCCc---eeeeEeeCc-ccceEEEEEeCCCCEEEEee-----------------CCCcEEEEeCCCC
Q 021744 126 E--KCKFLHSWTVGDGF---KLLTQLEGH-QKVVSGITLPSGSDKLYSGS-----------------KDETVRVWDCASG 182 (308)
Q Consensus 126 ~--~d~~i~iwd~~~~~---~~~~~~~~h-~~~v~~~~~~~~~~~l~s~s-----------------~dg~v~~wd~~~~ 182 (308)
- .+..|.+|++.... ..+.++.+. -.....+.+.+++.+.++.. ..|.|..+|..
T Consensus 134 h~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~-- 211 (355)
T 3sre_A 134 HPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN-- 211 (355)
T ss_dssp CSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--
T ss_pred CCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--
Confidence 1 25677777765431 234444432 23578999999998777654 12455555543
Q ss_pred eEEEEEe--CCCeeEEEEcCCCEEEEEc--CCcEEEEEcCC-Ccee---eeeCCCCCEEEEEEeC-C--EEEEEcCC-Ce
Q 021744 183 QCAGVIN--LGGEVGCMISEGPWIFIGV--TNFVKAWNTQT-NTDL---SLSGPVGQVYAMAVGN-D--LLFAGTQD-GA 250 (308)
Q Consensus 183 ~~~~~~~--~~~~v~~~~~~~~~l~~~~--d~~i~~wd~~~-~~~~---~~~~~~~~v~~~~~~~-~--~l~~g~~d-g~ 250 (308)
+...... ....-.+++++++.|+++. .+.|..|++.. ++.. .+ ......-.+++.+ + +.+++..+ +.
T Consensus 212 ~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~ 290 (355)
T 3sre_A 212 DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNGMR 290 (355)
T ss_dssp CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCHHH
T ss_pred eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCceE
Confidence 3222222 1222235568898887654 77999999864 3322 22 2345567788877 4 33333322 34
Q ss_pred EEEEEcCCCCcccccceeccc---cCCCeEEEEecCCCeEEEee-----ceEEEEee-cCceeEE
Q 021744 251 ILAWKFNVTTNCFEPAASLKV---HTDSNRAHFSRDVTSLLGSV-----SFIMFIGQ-NNKGVVC 306 (308)
Q Consensus 251 i~iwd~~~~~~~~~~~~~~~~---~~~~v~~~~s~d~~~l~~s~-----s~~i~~~~-~~~~~~~ 306 (308)
|..|+-..... ..+..+.. ....+...|..||+.+-++. ...+|+.. ..+-++|
T Consensus 291 v~~~~P~~~~~--s~v~rI~~~~~~~~~v~~v~~ddG~~l~~~T~a~~~~g~L~iGsv~~~~l~c 353 (355)
T 3sre_A 291 IFFYDAENPPG--SEVLRIQDILSEEPKVTVVYAENGTVLQGSTVAAVYKGKLLIGTVFHKALYC 353 (355)
T ss_dssp HHSCCTTSCCC--EEEEEEECTTSSSCEEEEEEEECSSSCCSEEEEEEETTEEEEEESSSCEEEE
T ss_pred EEEECCCCCCC--CEEEEEEccCCCCcEEEEEEEcCCCEEEeeEEEEEECCEEEEEEcCCCceec
Confidence 44444332111 33333331 23334448888888765333 56677755 3334444
No 288
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.98 E-value=0.11 Score=42.42 Aligned_cols=184 Identities=10% Similarity=0.089 Sum_probs=94.8
Q ss_pred eeccC--CCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCC----CeEEEEEcCCCc-eeeeEeeCcccc
Q 021744 81 RNNNF--NNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKC----KFLHSWTVGDGF-KLLTQLEGHQKV 152 (308)
Q Consensus 81 ~s~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d----~~i~iwd~~~~~-~~~~~~~~h~~~ 152 (308)
+.|+. ...+.+||..+.+............-..+.. .++.+ +.|+.+ ..+.+||+.+.. +.+..+......
T Consensus 16 ~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~ 94 (306)
T 3ii7_A 16 ALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF-WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDS 94 (306)
T ss_dssp EEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE-ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBS
T ss_pred EEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE-ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccc
Confidence 55554 3568888887654322111111111111222 24434 777754 678889988762 112222211111
Q ss_pred eEEEEEeCCCCEEEEeeCC------CcEEEEeCCCCeEEEEEeCCC---eeEEEEcCCCEEEEEc----------CCcEE
Q 021744 153 VSGITLPSGSDKLYSGSKD------ETVRVWDCASGQCAGVINLGG---EVGCMISEGPWIFIGV----------TNFVK 213 (308)
Q Consensus 153 v~~~~~~~~~~~l~s~s~d------g~v~~wd~~~~~~~~~~~~~~---~v~~~~~~~~~l~~~~----------d~~i~ 213 (308)
...+.+ ++..++.|+.+ ..+.+||..+.+-...-.... ...++..++++++.|. ...+.
T Consensus 95 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~ 172 (306)
T 3ii7_A 95 LAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCE 172 (306)
T ss_dssp CEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEE
T ss_pred eeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEE
Confidence 122222 56677777765 468899998876433222111 1223345667666654 23588
Q ss_pred EEEcCCCceeeeeCCC--CCEEEEEEeCC-EEEEEcCC-----CeEEEEEcCCCCcccccceec
Q 021744 214 AWNTQTNTDLSLSGPV--GQVYAMAVGND-LLFAGTQD-----GAILAWKFNVTTNCFEPAASL 269 (308)
Q Consensus 214 ~wd~~~~~~~~~~~~~--~~v~~~~~~~~-~l~~g~~d-----g~i~iwd~~~~~~~~~~~~~~ 269 (308)
+||+.+.+-..+.... ..-.+++...+ +++.|+.+ ..+.+||+.+.+ ++.+..+
T Consensus 173 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~ 234 (306)
T 3ii7_A 173 VYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNE--WKMVSPM 234 (306)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTE--EEECCCC
T ss_pred EeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCc--EEECCCC
Confidence 9999988655332211 11123334455 66666643 358899988764 2444433
No 289
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.96 E-value=0.12 Score=42.68 Aligned_cols=138 Identities=11% Similarity=0.116 Sum_probs=92.7
Q ss_pred CCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEeCCCeeEEE-EcCCCEEE
Q 021744 127 KCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCM-ISEGPWIF 205 (308)
Q Consensus 127 ~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~~~~v~~~-~~~~~~l~ 205 (308)
++..|.|.|+.++.+..+.--.- -+.-.+|..+.++--. ..++.++|+++.+.++.+...+.+.-+ |-+.+.|+
T Consensus 47 ~~~~VvIiDl~n~~~~~Rrpi~A----dsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~ 121 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIRRPISA----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA 121 (365)
T ss_dssp TEEEEEEEETTSTTSCEEEECCC----SEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEE
T ss_pred CCCEEEEEECCCCCCcccccccc----ceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCCeEE
Confidence 34478888988764433322211 2344588877766655 689999999999999999987777655 67888888
Q ss_pred EEcCCcEEEEEcCCC-cee-eeeCC----CCCEEEEEEeCC---EEEEEc--C----CCeEEEEEcCCCCcccccceecc
Q 021744 206 IGVTNFVKAWNTQTN-TDL-SLSGP----VGQVYAMAVGND---LLFAGT--Q----DGAILAWKFNVTTNCFEPAASLK 270 (308)
Q Consensus 206 ~~~d~~i~~wd~~~~-~~~-~~~~~----~~~v~~~~~~~~---~l~~g~--~----dg~i~iwd~~~~~~~~~~~~~~~ 270 (308)
.-.+..|+-|++... ++. .+..| ...|..-..+++ .+++|- . .|.+.+|..+. +..+.++
T Consensus 122 lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-----~~sQ~ie 196 (365)
T 2xzh_A 122 LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-----KVSQPIE 196 (365)
T ss_dssp EEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-----TEEEEEC
T ss_pred EEcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-----cccceee
Confidence 888999999999753 222 33333 346777777777 333332 2 36788998886 4455666
Q ss_pred ccCC
Q 021744 271 VHTD 274 (308)
Q Consensus 271 ~~~~ 274 (308)
+|..
T Consensus 197 Ghaa 200 (365)
T 2xzh_A 197 GHAA 200 (365)
T ss_dssp CSEE
T ss_pred eeee
Confidence 6643
No 290
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.94 E-value=0.13 Score=42.57 Aligned_cols=175 Identities=7% Similarity=-0.017 Sum_probs=103.1
Q ss_pred CCCcEEEEECCCCCCcccccceeeeeeeeeeeecCC-ce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCC
Q 021744 85 FNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQG-NC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGS 162 (308)
Q Consensus 85 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~ 162 (308)
....|+..+++..................+.|.+.+ .+ .+....+.|+.+++.........+...-.....+++++.+
T Consensus 11 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~ 90 (318)
T 3sov_A 11 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 90 (318)
T ss_dssp CEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTT
T ss_pred ccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCC
Confidence 356788999875531111111122235567777654 33 5556778899999876521112222223456789999755
Q ss_pred CE-EEEeeCCCcEEEEeCCCCeEEEEEe--CCCeeE-EEEcCCCEEEEEc---CCcEEEEEcCCCceeee-eCCCCCEEE
Q 021744 163 DK-LYSGSKDETVRVWDCASGQCAGVIN--LGGEVG-CMISEGPWIFIGV---TNFVKAWNTQTNTDLSL-SGPVGQVYA 234 (308)
Q Consensus 163 ~~-l~s~s~dg~v~~wd~~~~~~~~~~~--~~~~v~-~~~~~~~~l~~~~---d~~i~~wd~~~~~~~~~-~~~~~~v~~ 234 (308)
.. .++-...+.|.++++........+. ...+.. .+.+.+..|+.+. .+.|...++.......+ ...-...+.
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Png 170 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNG 170 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEE
T ss_pred CeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccE
Confidence 44 4555667889999987543333332 222222 2345555555433 46888888875444333 233346789
Q ss_pred EEEeCC---EEEEEcCCCeEEEEEcCCC
Q 021744 235 MAVGND---LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 235 ~~~~~~---~l~~g~~dg~i~iwd~~~~ 259 (308)
|+++++ ++++=+..+.|..+|+...
T Consensus 171 lavd~~~~~lY~aD~~~~~I~~~d~dG~ 198 (318)
T 3sov_A 171 LTLDYEEQKLYWADAKLNFIHKSNLDGT 198 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEeccCCEEEEEECCCCEEEEEcCCCC
Confidence 999985 5555667789999998753
No 291
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.91 E-value=0.11 Score=41.39 Aligned_cols=188 Identities=12% Similarity=-0.016 Sum_probs=113.6
Q ss_pred eeeeeeeeecCCc-e-EEeeCCCeEEEEEcCCCceeeeEee-CcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeE-
Q 021744 109 KTDILCRNWVQGN-C-MYGEKCKFLHSWTVGDGFKLLTQLE-GHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQC- 184 (308)
Q Consensus 109 ~~~~~~~~~~~~~-~-~~g~~d~~i~iwd~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~- 184 (308)
..+..+++.+++. . +....++.|...|.. + +.++.+. +-....-.+++.+++.++++.-.++.+.++++.....
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g-~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i 104 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-G-DLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEV 104 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-C-CEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-C-CEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCee
Confidence 3477788888764 3 556778999999988 6 5666653 2235678899998888777766778899998765432
Q ss_pred --EEEEeCC----C-----eeEEEEcCCCEEEEEc--CC-cEEEEEc--CCCceeeee-------CCCCCEEEEEEeCC-
Q 021744 185 --AGVINLG----G-----EVGCMISEGPWIFIGV--TN-FVKAWNT--QTNTDLSLS-------GPVGQVYAMAVGND- 240 (308)
Q Consensus 185 --~~~~~~~----~-----~v~~~~~~~~~l~~~~--d~-~i~~wd~--~~~~~~~~~-------~~~~~v~~~~~~~~- 240 (308)
+...... . +-.++.+.++.|.++. +. .|..|+- .+.....+. .+...+.+++++|.
T Consensus 105 ~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~t 184 (255)
T 3qqz_A 105 KILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQK 184 (255)
T ss_dssp EEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTT
T ss_pred eeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCC
Confidence 2333211 1 2233456666666544 33 4555551 111111111 12345789999998
Q ss_pred --EEEEEcCCCeEEEEEcCCCCcccccceeccc-c------CCCeEE-EEecCCCeEEEeeceEEEEeecC
Q 021744 241 --LLFAGTQDGAILAWKFNVTTNCFEPAASLKV-H------TDSNRA-HFSRDVTSLLGSVSFIMFIGQNN 301 (308)
Q Consensus 241 --~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~-~------~~~v~~-~~s~d~~~l~~s~s~~i~~~~~~ 301 (308)
+++.....+.+..+|....- .....+.. . -...-. +|.++|.+.+++-...+|.....
T Consensus 185 g~lliLS~~s~~L~~~d~~g~~---~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~~~ 252 (255)
T 3qqz_A 185 NTLLVLSHESRALQEVTLVGEV---IGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTPQ 252 (255)
T ss_dssp TEEEEEETTTTEEEEECTTCCE---EEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEEC-
T ss_pred CeEEEEECCCCeEEEEcCCCCE---EEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEEec
Confidence 67777788899999977531 12222221 1 012344 89999986667666677766543
No 292
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.84 E-value=0.32 Score=45.60 Aligned_cols=188 Identities=6% Similarity=-0.076 Sum_probs=112.1
Q ss_pred eeEEecCCCe--eeccCCCcEEEEECCCCCCcccccce---eeeeeeeeeeecCC-ce-EEeeCCCeEEEEEcCCCceee
Q 021744 71 AKRFANNTWG--RNNNFNNHSNNYRAGNSKNSNINNRA---VIKTDILCRNWVQG-NC-MYGEKCKFLHSWTVGDGFKLL 143 (308)
Q Consensus 71 ~i~~s~~g~~--~s~~~d~~i~vwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~-~~g~~d~~i~iwd~~~~~~~~ 143 (308)
.|+|.+.... ++-...+.|+.++++........... .......+++...+ .+ ++-...+.|.+.++... ...
T Consensus 428 gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~-~~~ 506 (791)
T 3m0c_C 428 ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV-KRK 506 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS-SEE
T ss_pred EEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC-eEE
Confidence 6888885544 66667788998888643110001111 11224456665544 33 56667789999998765 332
Q ss_pred eEeeCcccceEEEEEeCCCCEEEEeeC--CCcEEEEeCCCCeEEEEEeCC-CeeEEE--EcCCCEEEEEc--CCcEEEEE
Q 021744 144 TQLEGHQKVVSGITLPSGSDKLYSGSK--DETVRVWDCASGQCAGVINLG-GEVGCM--ISEGPWIFIGV--TNFVKAWN 216 (308)
Q Consensus 144 ~~~~~h~~~v~~~~~~~~~~~l~s~s~--dg~v~~wd~~~~~~~~~~~~~-~~v~~~--~~~~~~l~~~~--d~~i~~wd 216 (308)
..+...-.....|+++|...+|+.... .+.|...++........+... .....+ .+.+..|+.+. .+.|..+|
T Consensus 507 ~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d 586 (791)
T 3m0c_C 507 TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSID 586 (791)
T ss_dssp EEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEe
Confidence 233334456889999997666655442 367888888754443333321 233333 34566666544 66899999
Q ss_pred cCCCceeee-eC--CCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCC
Q 021744 217 TQTNTDLSL-SG--PVGQVYAMAVGND-LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 217 ~~~~~~~~~-~~--~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~ 259 (308)
+.......+ .. .-.....|++..+ ++++-...+.|...|..++
T Consensus 587 ~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 587 VNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp TTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred cCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCC
Confidence 976655433 22 2335678888878 6666677788998887766
No 293
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.81 E-value=0.17 Score=41.96 Aligned_cols=222 Identities=8% Similarity=0.011 Sum_probs=110.1
Q ss_pred eeEEecCCCeeeccCCCcEEEEECCCCCCcccccc--eeeeeeeeeeeecCCceEEeeCCCeE-EEEEcCCCceeeeEee
Q 021744 71 AKRFANNTWGRNNNFNNHSNNYRAGNSKNSNINNR--AVIKTDILCRNWVQGNCMYGEKCKFL-HSWTVGDGFKLLTQLE 147 (308)
Q Consensus 71 ~i~~s~~g~~~s~~~d~~i~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~d~~i-~iwd~~~~~~~~~~~~ 147 (308)
.|++.+ +....++.++.|.. ..+.++.-..... .....+..+.+.+++..+..+.++.| +..| .+..-.....
T Consensus 84 ~i~~~~-~~~~~~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S~D--gG~tW~~~~~ 159 (327)
T 2xbg_A 84 SVSFQG-NEGWIVGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKD--SGKNWQALVQ 159 (327)
T ss_dssp EEEEET-TEEEEEEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEESS--TTSSEEEEEC
T ss_pred EEEecC-CeEEEEECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEEcC--CCCCCEEeec
Confidence 677876 33433345554433 2233332211111 01122344555566666444455544 3222 2311222223
Q ss_pred CcccceEEEEEeCCCCEEEEeeCCCcEEEEeC--CCCeEEEEEeCCCeeEEE--EcCCCEEEEEcCCcEEEEEcCCCcee
Q 021744 148 GHQKVVSGITLPSGSDKLYSGSKDETVRVWDC--ASGQCAGVINLGGEVGCM--ISEGPWIFIGVTNFVKAWNTQTNTDL 223 (308)
Q Consensus 148 ~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~--~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~d~~i~~wd~~~~~~~ 223 (308)
.....+..+++.+++.+++.+...+..+-+|- .+-+.+. ......+..+ .+++++++++.++.+.+.+...++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~-~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW 238 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN-RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENW 238 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE-CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEE
T ss_pred CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC-CCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCee
Confidence 45567889999998877766654444444442 2223331 1122333333 36777777777888777643323322
Q ss_pred -eee----CCCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEeeceEEE
Q 021744 224 -SLS----GPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSVSFIMF 296 (308)
Q Consensus 224 -~~~----~~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~s~~i~ 296 (308)
.+. .....+.++.+.++ .++.++.+|.| ++....+. .++.+.........+.. .|.+++.+++++.+..|+
T Consensus 239 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~-tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~ 316 (327)
T 2xbg_A 239 GELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQ-TWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILL 316 (327)
T ss_dssp CCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTS-SCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEE
T ss_pred EeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCc-ccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEE
Confidence 121 12235889999876 44444456766 34444432 13333222222344555 787777766666666666
Q ss_pred Eee
Q 021744 297 IGQ 299 (308)
Q Consensus 297 ~~~ 299 (308)
...
T Consensus 317 ~~~ 319 (327)
T 2xbg_A 317 RYV 319 (327)
T ss_dssp EEC
T ss_pred EEc
Confidence 544
No 294
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.78 E-value=0.19 Score=42.10 Aligned_cols=172 Identities=6% Similarity=-0.029 Sum_probs=101.7
Q ss_pred CCCcEEEEECCCCCCcccccceeeeeeeeeeeecCC-ce-EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCC
Q 021744 85 FNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQG-NC-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGS 162 (308)
Q Consensus 85 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~ 162 (308)
....|+..+++..+.. ........+..+.+.+.+ .+ ++....+.|+.+++... .....+.........+++++.+
T Consensus 51 ~~~~I~~i~~~g~~~~--~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~-~~~~~~~~~~~~p~glavd~~~ 127 (349)
T 3v64_C 51 NRIDIRQVLPHRSEYT--LLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGS-NVEEVVSTGLESPGGLAVDWVH 127 (349)
T ss_dssp CBSCEEEECTTSCCEE--EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSSCSCCCEEEEETTT
T ss_pred cccceEEEeCCCCeeE--EeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCC-CceEEEeCCCCCccEEEEecCC
Confidence 3445777777543221 111111225667777554 33 45556788999998766 3322233233456789999755
Q ss_pred CEE-EEeeCCCcEEEEeCCCCeEEEEEeCC-CeeEE--EEcCCCEEEEEc--C-CcEEEEEcCCCceeee-eCCCCCEEE
Q 021744 163 DKL-YSGSKDETVRVWDCASGQCAGVINLG-GEVGC--MISEGPWIFIGV--T-NFVKAWNTQTNTDLSL-SGPVGQVYA 234 (308)
Q Consensus 163 ~~l-~s~s~dg~v~~wd~~~~~~~~~~~~~-~~v~~--~~~~~~~l~~~~--d-~~i~~wd~~~~~~~~~-~~~~~~v~~ 234 (308)
..| ++-...+.|.+.++........+... ..... +.+.+..|+.+. . +.|..+++.......+ ...-.....
T Consensus 128 g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnG 207 (349)
T 3v64_C 128 DKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNG 207 (349)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEE
T ss_pred CeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcce
Confidence 554 55566788999998754433333311 22233 345566665443 4 7899998876544433 223446789
Q ss_pred EEEeCC---EEEEEcCCCeEEEEEcCCC
Q 021744 235 MAVGND---LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 235 ~~~~~~---~l~~g~~dg~i~iwd~~~~ 259 (308)
|+++|+ ++++-+..+.|..+|+...
T Consensus 208 la~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 208 LTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 999975 5555566789999998753
No 295
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.75 E-value=0.16 Score=43.98 Aligned_cols=145 Identities=8% Similarity=-0.022 Sum_probs=86.6
Q ss_pred eeeeeeec--CCceEEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeC-CC----cEEEEeCCCCe
Q 021744 111 DILCRNWV--QGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSK-DE----TVRVWDCASGQ 183 (308)
Q Consensus 111 ~~~~~~~~--~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-dg----~v~~wd~~~~~ 183 (308)
...+++.| ++.+......+.|+.+|+.++ +. ..+.........++|++++++|+.+.. ++ .+...+.. +.
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~-~v-~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~ 215 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKE-YV-STVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SG 215 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTT-EE-EEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GT
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCC-EE-EEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cc
Confidence 45667775 344444443488999998876 33 333334566889999999996655544 22 23334432 22
Q ss_pred EE--EEEe-CCCee-EEEEc-CCCEEEEEc-CCcEEEEEcCCCceeee--eCCCCCEEEEEEeCC---EEEEEcCCCeEE
Q 021744 184 CA--GVIN-LGGEV-GCMIS-EGPWIFIGV-TNFVKAWNTQTNTDLSL--SGPVGQVYAMAVGND---LLFAGTQDGAIL 252 (308)
Q Consensus 184 ~~--~~~~-~~~~v-~~~~~-~~~~l~~~~-d~~i~~wd~~~~~~~~~--~~~~~~v~~~~~~~~---~l~~g~~dg~i~ 252 (308)
.. ..+. ...+. .++.+ ++.++++-. ++.|..+|..++....+ .........++++|+ ++++-...+.|.
T Consensus 216 ~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~ 295 (430)
T 3tc9_A 216 FKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYIL 295 (430)
T ss_dssp SCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEE
T ss_pred eeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEE
Confidence 11 2222 22222 23456 456555554 77999999987765322 122245788999998 455556778999
Q ss_pred EEEcCC
Q 021744 253 AWKFNV 258 (308)
Q Consensus 253 iwd~~~ 258 (308)
.++...
T Consensus 296 ~~~~d~ 301 (430)
T 3tc9_A 296 RSDYDW 301 (430)
T ss_dssp EEEEET
T ss_pred EEeCCc
Confidence 988764
No 296
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.71 E-value=0.34 Score=44.10 Aligned_cols=189 Identities=11% Similarity=-0.029 Sum_probs=105.9
Q ss_pred eeEEecCCCe--eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCC-ce-EEeeCCCeEEEEEcCCCceeeeEe
Q 021744 71 AKRFANNTWG--RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQG-NC-MYGEKCKFLHSWTVGDGFKLLTQL 146 (308)
Q Consensus 71 ~i~~s~~g~~--~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~g~~d~~i~iwd~~~~~~~~~~~ 146 (308)
.++|++.+.. ++=...+.|..++++...............+..+++...+ .. ++....+.|.+.++... .....+
T Consensus 44 ~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~-~~~~l~ 122 (619)
T 3s94_A 44 AVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS-LRKVLF 122 (619)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEE
T ss_pred EEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCC-CEEEEE
Confidence 7899986665 5555667888888864421110111111235556666543 44 55567789999998765 222222
Q ss_pred eCcccceEEEEEeCCCCEEEEeeC--CCcEEEEeCCCCeEEEEEe-CCCeeEEE--EcCCCEEEEEc--CCcEEEEEcCC
Q 021744 147 EGHQKVVSGITLPSGSDKLYSGSK--DETVRVWDCASGQCAGVIN-LGGEVGCM--ISEGPWIFIGV--TNFVKAWNTQT 219 (308)
Q Consensus 147 ~~h~~~v~~~~~~~~~~~l~s~s~--dg~v~~wd~~~~~~~~~~~-~~~~v~~~--~~~~~~l~~~~--d~~i~~wd~~~ 219 (308)
...-.....++++|.+..|+-... .+.|...++.......... .-.....+ .++++.|+.+. .+.|..+|+..
T Consensus 123 ~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG 202 (619)
T 3s94_A 123 WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 202 (619)
T ss_dssp CSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSC
T ss_pred eCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCC
Confidence 234456789999997665554443 3566666766332222222 11222333 45566666543 66899998876
Q ss_pred Cceeee-eCCCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCCC
Q 021744 220 NTDLSL-SGPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVTT 260 (308)
Q Consensus 220 ~~~~~~-~~~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~ 260 (308)
.....+ .+.......|++.++ ++.+-...+.|...|..+++
T Consensus 203 ~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 203 TNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp CEEC---------CCCEEESSSEEEEECTTTCSEEEEESSSCC
T ss_pred CccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCCCc
Confidence 554422 212223457788778 66666677889999987663
No 297
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.71 E-value=0.26 Score=42.71 Aligned_cols=182 Identities=11% Similarity=0.054 Sum_probs=104.0
Q ss_pred eeEEecC---CCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCceEEeeCC-----CeEEEEEcCCCce
Q 021744 71 AKRFANN---TWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNCMYGEKC-----KFLHSWTVGDGFK 141 (308)
Q Consensus 71 ~i~~s~~---g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d-----~~i~iwd~~~~~~ 141 (308)
.+++.|+ +.+ ++-.. +.|+.+|.++++... ..........+++.+++.+...... ..+...+......
T Consensus 143 gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~--~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~ 219 (433)
T 4hw6_A 143 RMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDI--KTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFT 219 (433)
T ss_dssp EEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEE--ECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTC
T ss_pred eEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEE--eecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCee
Confidence 7899985 555 44333 889999987664331 1112223677888888876333321 1233333332211
Q ss_pred eeeEeeCcccceEEEEEeC-CCCEEEEeeCCCcEEEEeCCCCeEEEEE-eCC--C-e-eEEEEcCCCEEEEEc--CCcEE
Q 021744 142 LLTQLEGHQKVVSGITLPS-GSDKLYSGSKDETVRVWDCASGQCAGVI-NLG--G-E-VGCMISEGPWIFIGV--TNFVK 213 (308)
Q Consensus 142 ~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~-~~~--~-~-v~~~~~~~~~l~~~~--d~~i~ 213 (308)
....+. .-.....++++| ++.+.++-..++.|+.+|..+++....+ ... . . -.++.++++.|+++. .+.|.
T Consensus 220 ~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~ 298 (433)
T 4hw6_A 220 ERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIY 298 (433)
T ss_dssp CEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEE
T ss_pred cccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEE
Confidence 111222 234456788999 6666666667789999999877663333 211 1 1 134567888666543 67899
Q ss_pred EEEcC--CCce---eeeeCC---------------CCCEEEEEE---------eCC--EEEEEcCCCeEEEEEc
Q 021744 214 AWNTQ--TNTD---LSLSGP---------------VGQVYAMAV---------GND--LLFAGTQDGAILAWKF 256 (308)
Q Consensus 214 ~wd~~--~~~~---~~~~~~---------------~~~v~~~~~---------~~~--~l~~g~~dg~i~iwd~ 256 (308)
.++.. ++.. ..+.+. -.....+++ .++ ++++-...+.|+.++.
T Consensus 299 ~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 299 RVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp EEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred EEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 98865 3321 112111 124677888 555 5556666788988874
No 298
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.68 E-value=0.25 Score=42.22 Aligned_cols=177 Identities=10% Similarity=0.009 Sum_probs=105.6
Q ss_pred eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCc-e-EEeeCCCeEEEEEcCCCc---eeeeEeeCcccceEE
Q 021744 81 RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGN-C-MYGEKCKFLHSWTVGDGF---KLLTQLEGHQKVVSG 155 (308)
Q Consensus 81 ~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~g~~d~~i~iwd~~~~~---~~~~~~~~h~~~v~~ 155 (308)
+.-+....|+..+++..+.. ........+..+.+.+.+. + .+....+.|+.+++.... .....+.........
T Consensus 86 ll~~~~~~I~~i~l~~~~~~--~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 163 (400)
T 3p5b_L 86 LFFTNRHEVRKMTLDRSEYT--SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 163 (400)
T ss_dssp EEEEETTEEEEECTTSCSCE--EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEE
T ss_pred eEEeccceeEEEccCCccee--EeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCccc
Confidence 33344567888888655332 1111223366777876543 3 555567889888887521 122223324456788
Q ss_pred EEEeCCCCE-EEEeeCCCcEEEEeCCCCeEEEEEe-CCCeeEE--EEcCCCEEEEEc---CCcEEEEEcCCCceeee-eC
Q 021744 156 ITLPSGSDK-LYSGSKDETVRVWDCASGQCAGVIN-LGGEVGC--MISEGPWIFIGV---TNFVKAWNTQTNTDLSL-SG 227 (308)
Q Consensus 156 ~~~~~~~~~-l~s~s~dg~v~~wd~~~~~~~~~~~-~~~~v~~--~~~~~~~l~~~~---d~~i~~wd~~~~~~~~~-~~ 227 (308)
+++++.+.. .++-...+.|.+.++........+. ....... +.+.+.+|+.+. .+.|...++.......+ ..
T Consensus 164 lavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~ 243 (400)
T 3p5b_L 164 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 243 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS
T ss_pred EEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC
Confidence 999985444 4555667899999988655444443 2222333 345566665443 46899999876554433 33
Q ss_pred CCCCEEEEEEeCC---EEEEEcCCCeEEEEEcCCC
Q 021744 228 PVGQVYAMAVGND---LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 228 ~~~~v~~~~~~~~---~l~~g~~dg~i~iwd~~~~ 259 (308)
.-.....|+++++ ++++-+..+.|..+|+...
T Consensus 244 ~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 244 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 3357899999976 4455566789999998754
No 299
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.65 E-value=0.21 Score=40.83 Aligned_cols=182 Identities=11% Similarity=0.087 Sum_probs=91.4
Q ss_pred ecCCCe-eeccCC----CcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeC----C-----CeEEEEEcCCC
Q 021744 75 ANNTWG-RNNNFN----NHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEK----C-----KFLHSWTVGDG 139 (308)
Q Consensus 75 s~~g~~-~s~~~d----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~----d-----~~i~iwd~~~~ 139 (308)
.-++.. +.|+.+ ..+.++|..+.+............-..+.. .++.+ +.|+. + ..+.+||+.+.
T Consensus 22 ~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~ 100 (308)
T 1zgk_A 22 KVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN 100 (308)
T ss_dssp CCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTT
T ss_pred CCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCC
Confidence 344555 666532 468888887654322111111111111222 23433 66665 2 46788998876
Q ss_pred c-eeeeEeeCcccceEEEEEeCCCCEEEEeeCC-----CcEEEEeCCCCeEEEEEeCCC---eeEEEEcCCCEEEEEc-C
Q 021744 140 F-KLLTQLEGHQKVVSGITLPSGSDKLYSGSKD-----ETVRVWDCASGQCAGVINLGG---EVGCMISEGPWIFIGV-T 209 (308)
Q Consensus 140 ~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d-----g~v~~wd~~~~~~~~~~~~~~---~v~~~~~~~~~l~~~~-d 209 (308)
. +.+..+.........+.+ ++..++.|+.+ ..+.+||+.+.+-...-.... ...++..++++++.|. +
T Consensus 101 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 178 (308)
T 1zgk_A 101 QWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFD 178 (308)
T ss_dssp EEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBC
T ss_pred eEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCC
Confidence 2 111112211112122222 55666766643 368889988765433222111 1123334666666654 2
Q ss_pred -----CcEEEEEcCCCceeeeeC---CCCCEEEEEEeCC-EEEEEcCC-----CeEEEEEcCCCC
Q 021744 210 -----NFVKAWNTQTNTDLSLSG---PVGQVYAMAVGND-LLFAGTQD-----GAILAWKFNVTT 260 (308)
Q Consensus 210 -----~~i~~wd~~~~~~~~~~~---~~~~v~~~~~~~~-~l~~g~~d-----g~i~iwd~~~~~ 260 (308)
..+.+||+.+.+-..+.. ..... +++...+ +++.|+.+ ..+.+||+.+.+
T Consensus 179 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 179 GTNRLNSAECYYPERNEWRMITAMNTIRSGA-GVCVLHNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp SSCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCCcCceEEEEeCCCCeEeeCCCCCCccccc-eEEEECCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 468999998876553221 11122 3333455 66666654 468999988764
No 300
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.57 E-value=0.018 Score=53.24 Aligned_cols=173 Identities=10% Similarity=0.002 Sum_probs=93.1
Q ss_pred CCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCc-e-EEeeCCCeEEEEEcCCC---ceeeeEeeCcccceEEEEEe
Q 021744 85 FNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGN-C-MYGEKCKFLHSWTVGDG---FKLLTQLEGHQKVVSGITLP 159 (308)
Q Consensus 85 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~g~~d~~i~iwd~~~~---~~~~~~~~~h~~~v~~~~~~ 159 (308)
..+.|+..++++.+... .......+..+.+.+.+. + ++-...+.|+.+++... ......+.........++++
T Consensus 384 ~~~~I~~id~~~~~~~~--~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD 461 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTS--LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 461 (699)
T ss_dssp CTTC-CEECTTSCCEEC--CSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECC
T ss_pred CccceEEEeCCCCccee--eeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEE
Confidence 34567777776543321 111112345566766543 3 34445678888888751 11222222122345678888
Q ss_pred CCC-CEEEEeeCCCcEEEEeCCCCeEEEEEeCC-CeeEE--EEcCCCEEEEEc---CCcEEEEEcCCCceeee-eCCCCC
Q 021744 160 SGS-DKLYSGSKDETVRVWDCASGQCAGVINLG-GEVGC--MISEGPWIFIGV---TNFVKAWNTQTNTDLSL-SGPVGQ 231 (308)
Q Consensus 160 ~~~-~~l~s~s~dg~v~~wd~~~~~~~~~~~~~-~~v~~--~~~~~~~l~~~~---d~~i~~wd~~~~~~~~~-~~~~~~ 231 (308)
+.+ .++++-...+.|.+.++........+... ..... +.+.+.+|+.+. .+.|..+++.......+ ...-..
T Consensus 462 ~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~ 541 (699)
T 1n7d_A 462 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQW 541 (699)
T ss_dssp CSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSS
T ss_pred eeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCC
Confidence 544 44455556788999998755433333211 11222 234444444332 36788887765433322 222345
Q ss_pred EEEEEEeCC---EEEEEcCCCeEEEEEcCCC
Q 021744 232 VYAMAVGND---LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 232 v~~~~~~~~---~l~~g~~dg~i~iwd~~~~ 259 (308)
.+.|+++|+ ++++-+..+.|..+++...
T Consensus 542 PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred ccEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence 678999976 5566667789999998753
No 301
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.46 E-value=0.76 Score=45.08 Aligned_cols=167 Identities=13% Similarity=0.151 Sum_probs=98.9
Q ss_pred CeEEEEEcCCCceeeeEeeC-cccceEEEE---EeCC-CCEEEEee----------CCCcEEEEeCCCCeEEE--EEeCC
Q 021744 129 KFLHSWTVGDGFKLLTQLEG-HQKVVSGIT---LPSG-SDKLYSGS----------KDETVRVWDCASGQCAG--VINLG 191 (308)
Q Consensus 129 ~~i~iwd~~~~~~~~~~~~~-h~~~v~~~~---~~~~-~~~l~s~s----------~dg~v~~wd~~~~~~~~--~~~~~ 191 (308)
..|++.|..+. +.+..++- ....+.+++ |..+ ..+++.|. ..|.|.++++..++... ....+
T Consensus 807 s~i~lidp~t~-~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~ 885 (1158)
T 3ei3_A 807 HNLLIIDQHTF-EVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVK 885 (1158)
T ss_dssp EEEEEEETTTC-CEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEES
T ss_pred EEEEEEeCCCC-eEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcC
Confidence 45778887776 45444432 223444444 3322 36777765 34789999987544332 23367
Q ss_pred CeeEEEEcCCCEEEEEcCCcEEEEEcCCCceeee--eCCCC-CEEEEEEeCCEEEEEcCCCeEEEEEcCCCCccccccee
Q 021744 192 GEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSL--SGPVG-QVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAAS 268 (308)
Q Consensus 192 ~~v~~~~~~~~~l~~~~d~~i~~wd~~~~~~~~~--~~~~~-~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~ 268 (308)
+.+.++..=+.+|+++-...|++|++...+.+.. ..+.. .+..+....++++.|..-..|.++..+... ..+..
T Consensus 886 g~v~al~~~~g~Lla~ig~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~---~~L~~ 962 (1158)
T 3ei3_A 886 GAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPME---GNFEE 962 (1158)
T ss_dssp SCEEEEEEETTEEEEEETTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTT---TEEEE
T ss_pred CcCEEEeeeCCEEEEEcCCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCC---CeEEE
Confidence 7888886544477778889999999987654421 11211 134565666788888888888877665432 22222
Q ss_pred cc--ccCCCeEE-EEecCCCeEEEeeceEEEEee
Q 021744 269 LK--VHTDSNRA-HFSRDVTSLLGSVSFIMFIGQ 299 (308)
Q Consensus 269 ~~--~~~~~v~~-~~s~d~~~l~~s~s~~i~~~~ 299 (308)
+. .+..++++ .|-.++.++++=....|++..
T Consensus 963 ~a~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~ 996 (1158)
T 3ei3_A 963 IARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQ 996 (1158)
T ss_dssp EEECCSCBCEEEEEEEETTEEEEEETTSEEEEEE
T ss_pred EEeecccccEEEEEEEccCcEEEEcCCCcEEEEe
Confidence 22 34556677 776666555444466666654
No 302
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.34 E-value=0.44 Score=41.02 Aligned_cols=199 Identities=7% Similarity=0.024 Sum_probs=117.4
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCc
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGH 149 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h 149 (308)
+.-.+|..+. |.-+ ..+++|+|+++.+.+.... ....+..-.|-.+... .--.+..|+-|++.....+.+.+.-|
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~--~~e~VvfWkWis~~~l-~lVT~taVyHWsi~~~s~P~kvFdR~ 145 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT--MTDDVTFWKWISLNTV-ALVTDNAVYHWSMEGESQPVKMFDRH 145 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEE--CSSCCCEEEEEETTEE-EEECSSEEEEEESSSSCCCEEEEECC
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhccee--cCCCceEEEecCCCeE-EEEcCCeeEEecccCCCCchhheecc
Confidence 5567898888 5444 7889999998775442211 1123444444444433 22235789999998654667667655
Q ss_pred c----cceEEEEEeCCCCEEEEee-------CCCcEEEEeCCCCeEEEEEe-CCCeeEEEEcCC-----CEEEEEc----
Q 021744 150 Q----KVVSGITLPSGSDKLYSGS-------KDETVRVWDCASGQCAGVIN-LGGEVGCMISEG-----PWIFIGV---- 208 (308)
Q Consensus 150 ~----~~v~~~~~~~~~~~l~s~s-------~dg~v~~wd~~~~~~~~~~~-~~~~v~~~~~~~-----~~l~~~~---- 208 (308)
. ..|.....+++.++++..+ -.|.+.+|..+.+.. +.+. |......+-.++ .+++.+.
T Consensus 146 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~ 224 (494)
T 1bpo_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 224 (494)
T ss_dssp GGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE-EEECCSEEEEEEEECTTCSSEEEEEEEEECSTT
T ss_pred hhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc-chheeeeeeeEEEecCCCCCCceEEEEEEecCC
Confidence 3 4567777788888875433 246777888775432 2222 222222222222 2333232
Q ss_pred CCcEEEEEcCCC----c-----eeeee----CCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccC
Q 021744 209 TNFVKAWNTQTN----T-----DLSLS----GPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHT 273 (308)
Q Consensus 209 d~~i~~wd~~~~----~-----~~~~~----~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 273 (308)
.+.+++.++... . ...+. ...+-..++.+++. .+..-+.-|.|++||+.++ .++..-+-..
T Consensus 225 g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTg----t~i~~nrIs~ 300 (494)
T 1bpo_A 225 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG----TCIYMNRISG 300 (494)
T ss_dssp CCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTC----CEEEEEECCS
T ss_pred CcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccc----eeeeeecccC
Confidence 368999988543 1 11111 22445678999988 7777788999999999998 5554444444
Q ss_pred CCeEE
Q 021744 274 DSNRA 278 (308)
Q Consensus 274 ~~v~~ 278 (308)
..|-.
T Consensus 301 ~~iF~ 305 (494)
T 1bpo_A 301 ETIFV 305 (494)
T ss_dssp SCEEE
T ss_pred CceEE
Confidence 44444
No 303
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.33 E-value=0.34 Score=39.56 Aligned_cols=181 Identities=12% Similarity=0.088 Sum_probs=91.9
Q ss_pred CCCe-eeccC----C-----CcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCC-----CeEEEEEcCCCc
Q 021744 77 NTWG-RNNNF----N-----NHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKC-----KFLHSWTVGDGF 140 (308)
Q Consensus 77 ~g~~-~s~~~----d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d-----~~i~iwd~~~~~ 140 (308)
++.. +.|+. + ..+.+||..+.+............-..+... ++.+ +.|+.+ ..+.+||+.+..
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 148 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI-DGHIYAVGGSHGCIHHNSVERYEPERDE 148 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE-TTEEEEECCEETTEECCCEEEEETTTTE
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE-CCEEEEEcCCCCCcccccEEEECCCCCe
Confidence 5556 77765 2 4578888876542211111111111112222 4444 666543 467889988762
Q ss_pred -eeeeEeeCcccceEEEEEeCCCCEEEEeeCC-----CcEEEEeCCCCeEEEEEeCCC---eeEEEEcCCCEEEEEc-C-
Q 021744 141 -KLLTQLEGHQKVVSGITLPSGSDKLYSGSKD-----ETVRVWDCASGQCAGVINLGG---EVGCMISEGPWIFIGV-T- 209 (308)
Q Consensus 141 -~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d-----g~v~~wd~~~~~~~~~~~~~~---~v~~~~~~~~~l~~~~-d- 209 (308)
+.+..+......- +++.. ++..++.|+.+ ..+.+||+.+.+-...-.... ...++..++++++.|. +
T Consensus 149 W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 226 (308)
T 1zgk_A 149 WHLVAPMLTRRIGV-GVAVL-NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDG 226 (308)
T ss_dssp EEECCCCSSCCBSC-EEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred EeECCCCCccccce-EEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCC
Confidence 1111122111111 22222 56666777654 468899988765432211111 1223344677767664 3
Q ss_pred ----CcEEEEEcCCCceeeeeCCCC--CEEEEEEeCC-EEEEEcCC-----CeEEEEEcCCCC
Q 021744 210 ----NFVKAWNTQTNTDLSLSGPVG--QVYAMAVGND-LLFAGTQD-----GAILAWKFNVTT 260 (308)
Q Consensus 210 ----~~i~~wd~~~~~~~~~~~~~~--~v~~~~~~~~-~l~~g~~d-----g~i~iwd~~~~~ 260 (308)
..+.+||+.+.+-..+..... .-.+++...+ +++.|+.+ ..+.+||+.+.+
T Consensus 227 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 227 QDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp SSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCccceEEEEeCCCCcEEECCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 468999999886553322111 1123334455 66666643 357888887753
No 304
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.26 E-value=0.35 Score=39.17 Aligned_cols=171 Identities=13% Similarity=0.140 Sum_probs=87.9
Q ss_pred CcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCC-----CeEEEEEcCCCc----eeeeEeeCcccceEEE
Q 021744 87 NHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKC-----KFLHSWTVGDGF----KLLTQLEGHQKVVSGI 156 (308)
Q Consensus 87 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d-----~~i~iwd~~~~~----~~~~~~~~h~~~v~~~ 156 (308)
..+.++|..+.+............-..+. ..++.+ +.|+.+ ..+.+||+.+.. +.+..+....... ++
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~-~~ 108 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASV-SLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLA-GA 108 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSC-EE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEE-EECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccce-eE
Confidence 35778887655422111111111111122 223433 667654 468899988762 1222222111222 22
Q ss_pred EEeCCCCEEEEeeCC-----CcEEEEeCCCCeEEEEEeCCC---eeEEEEcCCCEEEEEc-C-----CcEEEEEcCCCce
Q 021744 157 TLPSGSDKLYSGSKD-----ETVRVWDCASGQCAGVINLGG---EVGCMISEGPWIFIGV-T-----NFVKAWNTQTNTD 222 (308)
Q Consensus 157 ~~~~~~~~l~s~s~d-----g~v~~wd~~~~~~~~~~~~~~---~v~~~~~~~~~l~~~~-d-----~~i~~wd~~~~~~ 222 (308)
+.. ++..++.|+.+ ..+.+||+.+.+-...-.... ...++..++++++.|. + ..+.+||+.+.+-
T Consensus 109 ~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W 187 (301)
T 2vpj_A 109 TTL-GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHW 187 (301)
T ss_dssp EEE-TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEE
T ss_pred EEE-CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcE
Confidence 222 56666777654 368899988876443322211 1223345677766654 2 4688999988865
Q ss_pred eeeeCCC--CCEEEEEEeCC-EEEEEcCC-----CeEEEEEcCCCC
Q 021744 223 LSLSGPV--GQVYAMAVGND-LLFAGTQD-----GAILAWKFNVTT 260 (308)
Q Consensus 223 ~~~~~~~--~~v~~~~~~~~-~l~~g~~d-----g~i~iwd~~~~~ 260 (308)
..+.... ..-.+++...+ +++.|+.+ ..+.+||+.+.+
T Consensus 188 ~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 188 TNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred EeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence 5332111 11123334455 66666654 468999998764
No 305
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.16 E-value=0.87 Score=42.69 Aligned_cols=173 Identities=10% Similarity=0.020 Sum_probs=100.0
Q ss_pred CCCcEEEEECCCCCCcccccceeeeeeeeeeeecCC-ce-EEeeCCCeEEEEEcCCCc---eeeeEeeCcccceEEEEEe
Q 021744 85 FNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQG-NC-MYGEKCKFLHSWTVGDGF---KLLTQLEGHQKVVSGITLP 159 (308)
Q Consensus 85 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~g~~d~~i~iwd~~~~~---~~~~~~~~h~~~v~~~~~~ 159 (308)
....|+..++...+.. .+......+..+.+.+.. .+ ++....+.|+.+++.... .....+.........|+++
T Consensus 402 n~~~Ir~i~l~~~~~~--~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD 479 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYT--SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 479 (791)
T ss_dssp CBSSEEEECTTSCCCE--EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred cccceeEeeccCCcce--eeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeee
Confidence 3455777776544321 111112235566676643 33 555566788888886421 1122233244566789999
Q ss_pred CCCCEE-EEeeCCCcEEEEeCCCCeEEEEEe-CCCeeEEE--EcCCCEEEEEc---CCcEEEEEcCCCceeeee-CCCCC
Q 021744 160 SGSDKL-YSGSKDETVRVWDCASGQCAGVIN-LGGEVGCM--ISEGPWIFIGV---TNFVKAWNTQTNTDLSLS-GPVGQ 231 (308)
Q Consensus 160 ~~~~~l-~s~s~dg~v~~wd~~~~~~~~~~~-~~~~v~~~--~~~~~~l~~~~---d~~i~~wd~~~~~~~~~~-~~~~~ 231 (308)
+.+..| ++-...+.|.+.++........+. .......+ .+.+.+|+.+. .+.|...++.......+. ..-..
T Consensus 480 ~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~ 559 (791)
T 3m0c_C 480 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQW 559 (791)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSC
T ss_pred ecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCC
Confidence 877555 555667899999988554433333 22223333 45555555443 368999998876555333 33457
Q ss_pred EEEEEEeCC---EEEEEcCCCeEEEEEcCCC
Q 021744 232 VYAMAVGND---LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 232 v~~~~~~~~---~l~~g~~dg~i~iwd~~~~ 259 (308)
...|++.+. ++++=...+.|..+++...
T Consensus 560 P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 560 PNGITLDLLSGRLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ceEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 899999965 4444456678999998764
No 306
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.15 E-value=0.43 Score=39.10 Aligned_cols=184 Identities=11% Similarity=0.025 Sum_probs=90.0
Q ss_pred EecCCCe-eeccC----CC-------cEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCC-------CeEEE
Q 021744 74 FANNTWG-RNNNF----NN-------HSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKC-------KFLHS 133 (308)
Q Consensus 74 ~s~~g~~-~s~~~----d~-------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d-------~~i~i 133 (308)
...++.. +.|+. ++ .+.++|..+.+............-..+... ++.+ +.|+.+ ..+.+
T Consensus 53 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~ 131 (318)
T 2woz_A 53 VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV-DDKIYVVAGKDLQTEASLDSVLC 131 (318)
T ss_dssp ECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE-TTEEEEEEEEBTTTCCEEEEEEE
T ss_pred EEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE-CCEEEEEcCccCCCCcccceEEE
Confidence 3456666 77763 11 166778765543221111111111112222 3433 677654 35788
Q ss_pred EEcCCCc-eeeeEeeCcccceEEEEEeCCCCEEEEeeC------CCcEEEEeCCCCeEEEEEeCCC---eeEEEEcCCCE
Q 021744 134 WTVGDGF-KLLTQLEGHQKVVSGITLPSGSDKLYSGSK------DETVRVWDCASGQCAGVINLGG---EVGCMISEGPW 203 (308)
Q Consensus 134 wd~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~------dg~v~~wd~~~~~~~~~~~~~~---~v~~~~~~~~~ 203 (308)
||+.+.. +.+..+...... .+++. .++..++.|+. -..+.+||+.+.+-...-.... ...+...++++
T Consensus 132 yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i 209 (318)
T 2woz_A 132 YDPVAAKWSEVKNLPIKVYG-HNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKI 209 (318)
T ss_dssp EETTTTEEEEECCCSSCEES-CEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEE
T ss_pred EeCCCCCEeECCCCCCcccc-cEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEE
Confidence 8988762 111111111111 12222 35566666654 2358999998875433222111 12333456777
Q ss_pred EEEEc-C-----CcEEEEEcCCCceeeeeCCC--CCEEEEEEeCC-EEEEEcCC--------------CeEEEEEcCCCC
Q 021744 204 IFIGV-T-----NFVKAWNTQTNTDLSLSGPV--GQVYAMAVGND-LLFAGTQD--------------GAILAWKFNVTT 260 (308)
Q Consensus 204 l~~~~-d-----~~i~~wd~~~~~~~~~~~~~--~~v~~~~~~~~-~l~~g~~d--------------g~i~iwd~~~~~ 260 (308)
++.|. + ..+.+||+.+.+-..+.... ..-.+++...+ +++.|+.+ ..+.+||+.+.+
T Consensus 210 yv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 210 VIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp EEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred EEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 66654 2 35778999887655332211 11123444455 66666643 357788887753
No 307
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.12 E-value=0.49 Score=39.47 Aligned_cols=171 Identities=13% Similarity=0.187 Sum_probs=97.7
Q ss_pred EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCC----CC---EEEEee-C--CCcEEEEeC--CCCeEEEEEeC
Q 021744 123 MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSG----SD---KLYSGS-K--DETVRVWDC--ASGQCAGVINL 190 (308)
Q Consensus 123 ~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~----~~---~l~s~s-~--dg~v~~wd~--~~~~~~~~~~~ 190 (308)
+...+.+-+.+||+ ++ +.++.+.. +.+..+.+-|+ ++ ++++.. . +++|.+|++ .+++ +..+..
T Consensus 44 i~t~k~~gL~Vydl-~G-~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~ 118 (355)
T 3amr_A 44 ITTNKKSGLVVYSL-DG-KMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTD 118 (355)
T ss_dssp EEEETTTEEEEEET-TS-CEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSC
T ss_pred EEEcCCCCEEEEcC-CC-cEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeeccc
Confidence 45566788999999 66 56777753 55666666552 22 233333 3 578999976 3443 444421
Q ss_pred ---------CCee-EEEE--c-CCC-EEEEEc-CCcEEEEEcC---CC----cee-eeeCCCCCEEEEEEeCC--EEEEE
Q 021744 191 ---------GGEV-GCMI--S-EGP-WIFIGV-TNFVKAWNTQ---TN----TDL-SLSGPVGQVYAMAVGND--LLFAG 245 (308)
Q Consensus 191 ---------~~~v-~~~~--~-~~~-~l~~~~-d~~i~~wd~~---~~----~~~-~~~~~~~~v~~~~~~~~--~l~~g 245 (308)
..+. .|+. + .++ ++++.. ++.+..|++. .+ +.+ ++. ..+.+..+...+. .|+.+
T Consensus 119 ~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvDd~~g~Lyv~ 197 (355)
T 3amr_A 119 PDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAADDEYGRLYIA 197 (355)
T ss_dssp TTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEETTTTEEEEE
T ss_pred cccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEcCCCCeEEEe
Confidence 1111 3452 3 344 455555 8899888883 33 233 333 3457888999887 89999
Q ss_pred cCCCeEEEEEcCCCCc-ccccceecc-cc-CCCeEE-EE--ecCCC-eEEEee----ceEEEEee
Q 021744 246 TQDGAILAWKFNVTTN-CFEPAASLK-VH-TDSNRA-HF--SRDVT-SLLGSV----SFIMFIGQ 299 (308)
Q Consensus 246 ~~dg~i~iwd~~~~~~-~~~~~~~~~-~~-~~~v~~-~~--s~d~~-~l~~s~----s~~i~~~~ 299 (308)
-++.-|..++.+.... ..+.+..+. ++ ...+.. ++ .++++ +|++|+ +..+|-..
T Consensus 198 eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 198 EEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp ETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred cccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 9987766666543210 013333332 21 124444 44 56666 788777 55555554
No 308
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.98 E-value=0.053 Score=45.23 Aligned_cols=186 Identities=6% Similarity=-0.095 Sum_probs=92.9
Q ss_pred CceEEecCCCeEEEeecCCCCC-CCCCcccccCCCCCCccccccceeEEecCCCe-eec-cCCCcEEEEECCCCCCcccc
Q 021744 27 GLSTADTRQKVCNYWRAGKCNR-FPCPYLHRELPLPPAATANGAAAKRFANNTWG-RNN-NFNNHSNNYRAGNSKNSNIN 103 (308)
Q Consensus 27 ~~~~s~s~d~~i~~W~~~~~~~-~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~-~s~-~~d~~i~vwd~~~~~~~~~~ 103 (308)
.+++.++.|+.|.-.|..+++. +..+.- .. .|........ ...++.. +.. +.||.|..++.+++....
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~----~~-~p~~~~~~~~--~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~-- 81 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE----NF-QPLIEIQEPS--RLETYETLIIEPFGDGNIYYFNAHQGLQKL-- 81 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG----GS-CCSEECCCSC--TTTSSEEEEECCSTTTEEEEEETTTEEEEE--
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC----cc-CCcEEecCCc--cccCCcEEEEEECCCCEEEEEECCCCcEEe--
Confidence 4688899999999999887731 111110 00 1111100000 0012223 333 578888878776552210
Q ss_pred cceeeeee--eeeee------------ecCCceEEeeCCCeEEEEEcCCCceeeeEeeCccc-c------eEEEEEe---
Q 021744 104 NRAVIKTD--ILCRN------------WVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQK-V------VSGITLP--- 159 (308)
Q Consensus 104 ~~~~~~~~--~~~~~------------~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~-~------v~~~~~~--- 159 (308)
.......+ ..+.. +.++..++|+.++.+...|+.++ +.+.++..... . ..|....
T Consensus 82 ~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG-~~~W~~~~~~~~~~~~~~~e~~~~~~d~~ 160 (339)
T 2be1_A 82 PLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNG-EIISAFGPGSKNGYFGSQSVDCSPEEKIK 160 (339)
T ss_dssp EEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTC-CEEEEESTTCBCC----------------
T ss_pred eeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCC-cEEEEEecCCCcccccccccccccccccc
Confidence 00000001 01111 13456688999999999999999 77777753211 0 1111111
Q ss_pred --CCCCEEEEeeCCCcEEEEeCCCCeEEEEEe-----CCCe---eE---EEEcCCCEEEEEcCCcEEEEEcCCCceee
Q 021744 160 --SGSDKLYSGSKDETVRVWDCASGQCAGVIN-----LGGE---VG---CMISEGPWIFIGVTNFVKAWNTQTNTDLS 224 (308)
Q Consensus 160 --~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-----~~~~---v~---~~~~~~~~l~~~~d~~i~~wd~~~~~~~~ 224 (308)
..+..++.+..+..+.+.+ ++++ +..+. .... +. ....++.++++..|+.|.-+|..+++.+.
T Consensus 161 ~d~~~~~v~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 161 LQECENMIVIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCIAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp ----CCEEEEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCEEEETTTEEEEECSTTCCEEE
T ss_pred cccCCCeEEEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEEEECCCCEEEEEECCCCcEEE
Confidence 1235677777777777766 4554 32221 0000 00 00123566666668888888888777654
No 309
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.79 E-value=0.96 Score=44.95 Aligned_cols=185 Identities=8% Similarity=0.035 Sum_probs=104.2
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCc
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGH 149 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h 149 (308)
+.-.+|..+. |.-+ ..+++|+|+++.+.+..... ...|..-.|-..... .--.+..|+-|++.....+.+.+.-|
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~--~e~VvfWkWis~~~l-~lVT~~aVyHW~~~~~s~P~k~fdR~ 145 (1630)
T 1xi4_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM--TDDVTFWKWISLNTV-ALVTDNAVYHWSMEGESQPVKMFDRH 145 (1630)
T ss_pred hhccCCCcceEEEec-CCeEEEeehHHhhhhccccc--CCCceEEEecCCCee-EEEcCCeEEEeccCCCCccHHHHhcc
Confidence 4566888887 4443 78899999987655532221 223444444444333 11235679999997543555555444
Q ss_pred ----ccceEEEEEeCCCCEEEEee-------CCCcEEEEeCCCCeEEEEEe-CCCeeEEEE-----cCCCEEEEEc----
Q 021744 150 ----QKVVSGITLPSGSDKLYSGS-------KDETVRVWDCASGQCAGVIN-LGGEVGCMI-----SEGPWIFIGV---- 208 (308)
Q Consensus 150 ----~~~v~~~~~~~~~~~l~s~s-------~dg~v~~wd~~~~~~~~~~~-~~~~v~~~~-----~~~~~l~~~~---- 208 (308)
...|..-..+++.++++..+ -.|.+.+|..+.+... .+. |......+- .+..+++.+.
T Consensus 146 ~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ-~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~ 224 (1630)
T 1xi4_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-PIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 224 (1630)
T ss_pred hhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccch-hhhHhHhhhheeccCCCCCCceEEEEEEecCC
Confidence 34567777788888865333 3467778876643221 111 111111111 1122333222
Q ss_pred CCcEEEEEcCCC----cee-----e--ee--CCCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCC
Q 021744 209 TNFVKAWNTQTN----TDL-----S--LS--GPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTT 260 (308)
Q Consensus 209 d~~i~~wd~~~~----~~~-----~--~~--~~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~ 260 (308)
.+.+++.++... ... . +. ...+-..++..++. .+..-+.-|.|.+||+.++.
T Consensus 225 g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~ 291 (1630)
T 1xi4_A 225 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT 291 (1630)
T ss_pred CceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccch
Confidence 258888887543 111 1 11 12334567888887 66677888999999999983
No 310
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.59 E-value=0.8 Score=37.79 Aligned_cols=220 Identities=9% Similarity=-0.040 Sum_probs=108.2
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccc---eeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEe
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNR---AVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQL 146 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~ 146 (308)
+|.|.+.+.. + ++.++.| +...+.++.-..... .....+..+.+.+ +.....+..+.|+. ....+ +.-...
T Consensus 40 ~v~~~~~~~~~~-~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~g~~g~i~~-S~DgG-~tW~~~ 114 (327)
T 2xbg_A 40 DMSFIDRHHGWL-VGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIVGEPPIMLH-TTDGG-QSWSQI 114 (327)
T ss_dssp EEEESSSSCEEE-EETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEEEETTEEEE-ESSTT-SSCEEC
T ss_pred EEEECCCCcEEE-EcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEEECCCeEEE-ECCCC-CCceEC
Confidence 5677666666 6 4556655 333333432211111 1122355666655 44444455665543 22223 222222
Q ss_pred e---CcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe--CCCeeEEE--EcCCCEEEEEcCCcEEEE-Ec-
Q 021744 147 E---GHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN--LGGEVGCM--ISEGPWIFIGVTNFVKAW-NT- 217 (308)
Q Consensus 147 ~---~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~--~~~~v~~~--~~~~~~l~~~~d~~i~~w-d~- 217 (308)
. .+...+..+.+.+++..++.+ .++.|..- ...++.-.... ....+..+ .+++.+++++..+.+..- |-
T Consensus 115 ~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g 192 (327)
T 2xbg_A 115 PLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRT-KDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG 192 (327)
T ss_dssp CCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEE-SSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTT
T ss_pred ccccCCCCCeEEEEEECCCCEEEEe-CCccEEEE-cCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC
Confidence 1 233457778777666555544 45644321 12233333332 22334443 367788888877765443 32
Q ss_pred -CCCceeeeeCCCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCCCcccccceec-cccCCCeEE-EEecCCCeEEEeece
Q 021744 218 -QTNTDLSLSGPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAASL-KVHTDSNRA-HFSRDVTSLLGSVSF 293 (308)
Q Consensus 218 -~~~~~~~~~~~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~v~~-~~s~d~~~l~~s~s~ 293 (308)
.+.+.+. ......+..+.+.++ .+...+.+|.+++.+...+.. ++.+..- ..+...+.. .+.+++.+++++...
T Consensus 193 G~tW~~~~-~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~t-W~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g 270 (327)
T 2xbg_A 193 QTAWEPHN-RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSEN-WGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAG 270 (327)
T ss_dssp CSSCEEEE-CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEE-ECCCBCTTSSCCSCEEEEEESSSSCEEEEESTT
T ss_pred CCceeECC-CCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCe-eEeccCCcccCCcceEEEEecCCCEEEEEeCCC
Confidence 2223332 234557888999888 555566788887764322210 1222111 012234566 788887777766555
Q ss_pred EEEEee
Q 021744 294 IMFIGQ 299 (308)
Q Consensus 294 ~i~~~~ 299 (308)
.+|...
T Consensus 271 ~i~~S~ 276 (327)
T 2xbg_A 271 ALLCSQ 276 (327)
T ss_dssp CEEEES
T ss_pred eEEEeC
Confidence 555443
No 311
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.45 E-value=1.1 Score=38.46 Aligned_cols=100 Identities=9% Similarity=0.060 Sum_probs=68.2
Q ss_pred eCCCCEEEEeeCCCcEEEEeCCCCeEEEEEeCC----C-ee--EEEEcCCCEEEEEcCCcEEEEEcCCCc----------
Q 021744 159 PSGSDKLYSGSKDETVRVWDCASGQCAGVINLG----G-EV--GCMISEGPWIFIGVTNFVKAWNTQTNT---------- 221 (308)
Q Consensus 159 ~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~~----~-~v--~~~~~~~~~l~~~~d~~i~~wd~~~~~---------- 221 (308)
..++..++.+- ++.||.-++.....-+.++.+ . .+ ..+.++|++|+..++..|.+..+..+.
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCccccccc
Confidence 34555555543 377888887754444445433 1 23 334688999999999999999887331
Q ss_pred ---eeeeeC------CCCCEEEEEEeCC-----EEEEEcCCCeEEEEEcCCC
Q 021744 222 ---DLSLSG------PVGQVYAMAVGND-----LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 222 ---~~~~~~------~~~~v~~~~~~~~-----~l~~g~~dg~i~iwd~~~~ 259 (308)
+..+.- ...+|..+.|+|- .|++-..|+.|++||+...
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s 159 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNS 159 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCT
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccC
Confidence 111111 3568999999996 7888899999999999863
No 312
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.42 E-value=0.84 Score=36.93 Aligned_cols=139 Identities=16% Similarity=0.177 Sum_probs=74.1
Q ss_pred CCce-EEeeCC-----CeEEEEEcCCCc-eeeeEeeCcccceEEEEEeCCCCEEEEeeCCC-----cEEEEeCCCCeEEE
Q 021744 119 QGNC-MYGEKC-----KFLHSWTVGDGF-KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDE-----TVRVWDCASGQCAG 186 (308)
Q Consensus 119 ~~~~-~~g~~d-----~~i~iwd~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg-----~v~~wd~~~~~~~~ 186 (308)
++.+ +.|+.+ ..+.+||+.+.. +.+..+...... .+++.. ++..++.|+.++ .+.+||+.+.+-..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRST-LGAAVL-NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEE-TTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccc-eEEEEE-CCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 4433 667644 358889988762 111122211111 122222 456667776553 57788988775433
Q ss_pred EEeCCC---eeEEEEcCCCEEEEEc-C-------CcEEEEEcCCCceeeee---CCCCCEEEEEEeCC-EEEEEcCC---
Q 021744 187 VINLGG---EVGCMISEGPWIFIGV-T-------NFVKAWNTQTNTDLSLS---GPVGQVYAMAVGND-LLFAGTQD--- 248 (308)
Q Consensus 187 ~~~~~~---~v~~~~~~~~~l~~~~-d-------~~i~~wd~~~~~~~~~~---~~~~~v~~~~~~~~-~l~~g~~d--- 248 (308)
.-.... ...+...++++++.|. + ..+.+||+.+.+-..+. ..... .+++...+ +++.|+.+
T Consensus 139 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~ 217 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSG-AGVGVLNNLLYAVGGHDGPL 217 (302)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBS-CEEEEETTEEEEECCBSSSS
T ss_pred cCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccccc-ccEEEECCEEEEECCCCCCc
Confidence 322111 1223345666666654 2 35889999887655322 11112 23344455 66666654
Q ss_pred --CeEEEEEcCCCC
Q 021744 249 --GAILAWKFNVTT 260 (308)
Q Consensus 249 --g~i~iwd~~~~~ 260 (308)
..+.+||+.+.+
T Consensus 218 ~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 218 VRKSVEVYDPTTNA 231 (302)
T ss_dssp BCCCEEEEETTTTE
T ss_pred ccceEEEEeCCCCC
Confidence 368899988754
No 313
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.29 E-value=0.97 Score=36.88 Aligned_cols=176 Identities=9% Similarity=0.043 Sum_probs=86.4
Q ss_pred eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeC-----------CCeEEEEEcCCCc-eeeeEee
Q 021744 81 RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEK-----------CKFLHSWTVGDGF-KLLTQLE 147 (308)
Q Consensus 81 ~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~-----------d~~i~iwd~~~~~-~~~~~~~ 147 (308)
+.|+ ..+.+||..+.+....................++.+ +.|+. ...+.+||+.+.. +.+..+.
T Consensus 9 ~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p 86 (315)
T 4asc_A 9 MISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLP 86 (315)
T ss_dssp EEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBS
T ss_pred EEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCC
Confidence 4455 568888887665321111111011111222234444 66663 1237788888762 1111111
Q ss_pred CcccceEEEEEeCCCCEEEEeeCC--------CcEEEEeCCCCeEEEEEeCCC---eeEEEEcCCCEEEEEcC-------
Q 021744 148 GHQKVVSGITLPSGSDKLYSGSKD--------ETVRVWDCASGQCAGVINLGG---EVGCMISEGPWIFIGVT------- 209 (308)
Q Consensus 148 ~h~~~v~~~~~~~~~~~l~s~s~d--------g~v~~wd~~~~~~~~~~~~~~---~v~~~~~~~~~l~~~~d------- 209 (308)
..... .+++.. ++..++.|+.+ ..+.+||..+.+-...-..+. ...++..++++++.|..
T Consensus 87 ~~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 164 (315)
T 4asc_A 87 SPRCL-FGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCL 164 (315)
T ss_dssp SCEES-CEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBC
T ss_pred cchhc-eeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCccc
Confidence 11111 122222 45666666632 468899998875332211111 12233456666666542
Q ss_pred CcEEEEEcCCCceeeeeCCC--CCEEEEEEeCC-EEEEEcCCC-----eEEEEEcCCCC
Q 021744 210 NFVKAWNTQTNTDLSLSGPV--GQVYAMAVGND-LLFAGTQDG-----AILAWKFNVTT 260 (308)
Q Consensus 210 ~~i~~wd~~~~~~~~~~~~~--~~v~~~~~~~~-~l~~g~~dg-----~i~iwd~~~~~ 260 (308)
..+.+||+.+.+-..+.... ..-.+++...+ +++.|+.++ .+.+||+.+.+
T Consensus 165 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 165 NKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred ceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCe
Confidence 46899999887655332111 11123334455 566665543 58888888754
No 314
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.25 E-value=1.1 Score=37.12 Aligned_cols=147 Identities=8% Similarity=-0.013 Sum_probs=90.5
Q ss_pred eeeeeecC-CceEEee-CCCeEEEEEcCCCceeee-EeeC----c--ccceEEEEE---eCCCCEEEEee----------
Q 021744 112 ILCRNWVQ-GNCMYGE-KCKFLHSWTVGDGFKLLT-QLEG----H--QKVVSGITL---PSGSDKLYSGS---------- 169 (308)
Q Consensus 112 ~~~~~~~~-~~~~~g~-~d~~i~iwd~~~~~~~~~-~~~~----h--~~~v~~~~~---~~~~~~l~s~s---------- 169 (308)
.+..|.+. +.+..++ ..+.|..|+...+ .... .+.+ . ...+..+.| .|++++++...
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~-~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQ-SHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTC-CEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCC-eEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 34455543 4444444 7899999999755 2222 2222 1 114578999 68877776543
Q ss_pred ---CCCcEEEEeCC---CCeEEEEEeCC----C----------eeEEE--EcCCCEEEEEc-C-CcEEEEEcCCCceeee
Q 021744 170 ---KDETVRVWDCA---SGQCAGVINLG----G----------EVGCM--ISEGPWIFIGV-T-NFVKAWNTQTNTDLSL 225 (308)
Q Consensus 170 ---~dg~v~~wd~~---~~~~~~~~~~~----~----------~v~~~--~~~~~~l~~~~-d-~~i~~wd~~~~~~~~~ 225 (308)
.+..|..+|+. +++.+...... + ....+ -++|+..++++ . +.|...+........+
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~ 174 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTF 174 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeee
Confidence 26789999999 88877766521 1 13333 36677777665 6 7777776664433321
Q ss_pred e--C----CCCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCC
Q 021744 226 S--G----PVGQVYAMAVGND--LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 226 ~--~----~~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~ 259 (308)
. . .....+.|+++|+ .|++....|.+..+|+...
T Consensus 175 ~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred eecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 1 1 1123678999998 5555555999999998853
No 315
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.13 E-value=1.2 Score=37.03 Aligned_cols=130 Identities=13% Similarity=0.008 Sum_probs=60.5
Q ss_pred CeEEEEEcCCCc-eeeeEeeCcccceEEEEEeCCCCEEEEeeC------CCcEEEEeC--CCCeEEEEEeC--CC---ee
Q 021744 129 KFLHSWTVGDGF-KLLTQLEGHQKVVSGITLPSGSDKLYSGSK------DETVRVWDC--ASGQCAGVINL--GG---EV 194 (308)
Q Consensus 129 ~~i~iwd~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~------dg~v~~wd~--~~~~~~~~~~~--~~---~v 194 (308)
..+.+||+.+.. +.+..+......-.+++.. ++..++.|+. ...+..+|+ .+.+-...-.. .. ..
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccc
Confidence 578899998762 1222222111111233333 4556666654 345777877 43332211111 11 12
Q ss_pred EEEEcCCCEEEEEc-C----------------------CcEEEEEcCCCceeee---eCCCCCEEEEEEeCC-EEEEEcC
Q 021744 195 GCMISEGPWIFIGV-T----------------------NFVKAWNTQTNTDLSL---SGPVGQVYAMAVGND-LLFAGTQ 247 (308)
Q Consensus 195 ~~~~~~~~~l~~~~-d----------------------~~i~~wd~~~~~~~~~---~~~~~~v~~~~~~~~-~l~~g~~ 247 (308)
.+...++++++.|. + ..+.+||+.+.+-..+ ........++ ...+ +++.|+.
T Consensus 247 ~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~i~v~GG~ 325 (357)
T 2uvk_A 247 FAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSL-PWNNSLLIIGGE 325 (357)
T ss_dssp EEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEE-EETTEEEEEEEE
T ss_pred eEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeE-EeCCEEEEEeee
Confidence 24456677777654 2 2577999987754422 2222222233 3344 6666664
Q ss_pred CC------eEEEEEcCCCC
Q 021744 248 DG------AILAWKFNVTT 260 (308)
Q Consensus 248 dg------~i~iwd~~~~~ 260 (308)
++ .|.++++++++
T Consensus 326 ~~~~~~~~~v~~l~~~~~~ 344 (357)
T 2uvk_A 326 TAGGKAVTDSVLITVKDNK 344 (357)
T ss_dssp CGGGCEEEEEEEEEC-CCS
T ss_pred CCCCCEeeeEEEEEEcCcE
Confidence 42 36666888763
No 316
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.07 E-value=1.6 Score=38.30 Aligned_cols=146 Identities=5% Similarity=0.004 Sum_probs=85.4
Q ss_pred eeeeeeecC--Cce-EEeeCCCeEEEEEcCCCceeeeEeeC---cccceEEEEE-------eCCCCEEEEeeCCC-----
Q 021744 111 DILCRNWVQ--GNC-MYGEKCKFLHSWTVGDGFKLLTQLEG---HQKVVSGITL-------PSGSDKLYSGSKDE----- 172 (308)
Q Consensus 111 ~~~~~~~~~--~~~-~~g~~d~~i~iwd~~~~~~~~~~~~~---h~~~v~~~~~-------~~~~~~l~s~s~dg----- 172 (308)
...+++.|. +.+ ++....+.|++.|++++ .....+.. .......++| ++++.+|+.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~-~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNR-MLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTT-EEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCC-EEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 456677763 334 44344467888998886 33332322 1235889999 99998666665543
Q ss_pred --cEEEEeCCC-Ce--------EEEEEeCCCeeEEEEcCCCEEE-EEc-CCcEEEEEcC-------CCce----------
Q 021744 173 --TVRVWDCAS-GQ--------CAGVINLGGEVGCMISEGPWIF-IGV-TNFVKAWNTQ-------TNTD---------- 222 (308)
Q Consensus 173 --~v~~wd~~~-~~--------~~~~~~~~~~v~~~~~~~~~l~-~~~-d~~i~~wd~~-------~~~~---------- 222 (308)
.|.+.+... ++ .+..+.+.. -.++.+++..|+ +-. ++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~-giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCN-GATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCC-CEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCce-EEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266665333 22 222222222 123456445444 444 7789999987 5543
Q ss_pred -e-e-e-eCCCCCEEEEEEeCC--E-EEEEcCCCeEEEEEcCC
Q 021744 223 -L-S-L-SGPVGQVYAMAVGND--L-LFAGTQDGAILAWKFNV 258 (308)
Q Consensus 223 -~-~-~-~~~~~~v~~~~~~~~--~-l~~g~~dg~i~iwd~~~ 258 (308)
. . + .+.....+.|+|+|+ + +++-+..+.|+.++...
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 1 1 1 122345689999998 3 55556778899977653
No 317
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.06 E-value=0.095 Score=43.67 Aligned_cols=103 Identities=12% Similarity=0.127 Sum_probs=66.5
Q ss_pred CceEEeeCCCeEEEEEcCCCceeeeEeeCc-ccceEEEEEe--C-CCCEEEEe-eCCCcEEEEeCCCCeEEEEEeCC---
Q 021744 120 GNCMYGEKCKFLHSWTVGDGFKLLTQLEGH-QKVVSGITLP--S-GSDKLYSG-SKDETVRVWDCASGQCAGVINLG--- 191 (308)
Q Consensus 120 ~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h-~~~v~~~~~~--~-~~~~l~s~-s~dg~v~~wd~~~~~~~~~~~~~--- 191 (308)
+..+.++.||.|+-.|..++ +.+.+++.. ..++....-. + ++..++.. +.||.+..++.++|.....+..+
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG-~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNG-HIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTT-EEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CEEEEEeCCCeEEEEECCCC-cEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 44578899999999999999 777777643 1222221111 1 22333333 68999999999998766655521
Q ss_pred --CeeEE----EE------cCCCEEEEEc-CCcEEEEEcCCCcee
Q 021744 192 --GEVGC----MI------SEGPWIFIGV-TNFVKAWNTQTNTDL 223 (308)
Q Consensus 192 --~~v~~----~~------~~~~~l~~~~-d~~i~~wd~~~~~~~ 223 (308)
.+... +. ..+..+++|+ ++++...|+++|+.+
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~ 134 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEII 134 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEE
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEE
Confidence 22221 01 1445556655 999999999999988
No 318
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=94.96 E-value=1.8 Score=38.10 Aligned_cols=187 Identities=9% Similarity=-0.017 Sum_probs=104.3
Q ss_pred eeEE-------ecCCCe-eeccCCC-------cEEEEECCC-CCCcc-c--ccceeeeeeeeeeeecC-Cce-EEeeCCC
Q 021744 71 AKRF-------ANNTWG-RNNNFNN-------HSNNYRAGN-SKNSN-I--NNRAVIKTDILCRNWVQ-GNC-MYGEKCK 129 (308)
Q Consensus 71 ~i~~-------s~~g~~-~s~~~d~-------~i~vwd~~~-~~~~~-~--~~~~~~~~~~~~~~~~~-~~~-~~g~~d~ 129 (308)
.++| +++|.. +.+...+ .|.+.+... ++... . .....-.....++..++ +.+ ++...++
T Consensus 190 ~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g 269 (496)
T 3kya_A 190 SIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKG 269 (496)
T ss_dssp EEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTT
T ss_pred EEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCC
Confidence 7999 999995 4444332 255665443 22210 0 01111122456677774 444 5566788
Q ss_pred eEEEEEcC-------CCcee-----------eeEe-e-CcccceEEEEEeCCCCEE-EEeeCCCcEEEEeC--CCCeEE-
Q 021744 130 FLHSWTVG-------DGFKL-----------LTQL-E-GHQKVVSGITLPSGSDKL-YSGSKDETVRVWDC--ASGQCA- 185 (308)
Q Consensus 130 ~i~iwd~~-------~~~~~-----------~~~~-~-~h~~~v~~~~~~~~~~~l-~s~s~dg~v~~wd~--~~~~~~- 185 (308)
.|..+|+. ++ .. ...+ . +.......++|+|+++.| ++=+....|+.++. .++...
T Consensus 270 ~V~r~d~~~~~~~~~tg-~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~ 348 (496)
T 3kya_A 270 QVFRLDLVDYFKTIKNG-GSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFIT 348 (496)
T ss_dssp EEEEECHHHHHHHHHTT-CCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECC
T ss_pred EEEEEecccccccccCc-eeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecc
Confidence 89999987 45 22 1121 1 123446799999999954 55556778888554 333321
Q ss_pred -EEEe-C----------------CCee-EEEE--------cCCCEEEEEc-CCcEEEEEcCCCceeeeeCC---------
Q 021744 186 -GVIN-L----------------GGEV-GCMI--------SEGPWIFIGV-TNFVKAWNTQTNTDLSLSGP--------- 228 (308)
Q Consensus 186 -~~~~-~----------------~~~v-~~~~--------~~~~~l~~~~-d~~i~~wd~~~~~~~~~~~~--------- 228 (308)
..+. . ..+. ..+. .++.++++-. ++.|+.++ .++...++.+.
T Consensus 349 ~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v~TiaG~g~~~~~~~~ 427 (496)
T 3kya_A 349 PYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIVSTYAGRGASTSLADG 427 (496)
T ss_dssp CEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBEEEEEESCTTHHHHHS
T ss_pred cEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCCEEEEecccccccccCc
Confidence 2221 1 1222 1222 2344444444 77999998 45554444321
Q ss_pred ---------------CCCEEEEEEeCC---EEEEEcCCCeEEEEEcCCC
Q 021744 229 ---------------VGQVYAMAVGND---LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 229 ---------------~~~v~~~~~~~~---~l~~g~~dg~i~iwd~~~~ 259 (308)
-.....|+++++ ++++=+.+.+|+.+++...
T Consensus 428 ~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 428 NQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp CSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred cccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 124678888874 5556666778888888764
No 319
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.81 E-value=1.5 Score=36.46 Aligned_cols=117 Identities=15% Similarity=0.066 Sum_probs=56.3
Q ss_pred CcEEEEeCCCCeEEEEEeCC--C-e-eEEEEcCCCEEEEEc-------CCcEEEEEc--CCCceeeeeC---CCCC-EEE
Q 021744 172 ETVRVWDCASGQCAGVINLG--G-E-VGCMISEGPWIFIGV-------TNFVKAWNT--QTNTDLSLSG---PVGQ-VYA 234 (308)
Q Consensus 172 g~v~~wd~~~~~~~~~~~~~--~-~-v~~~~~~~~~l~~~~-------d~~i~~wd~--~~~~~~~~~~---~~~~-v~~ 234 (308)
..+.+||+.+.+-...-... . . ..++..++++++.|. ...+.+||+ .+.+-..+.. .... -.+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~ 247 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGF 247 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCE
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccce
Confidence 57899999887544333222 1 1 233345666666654 235777887 4444332221 1111 122
Q ss_pred EEEeCC-EEEEEcCC----------------------CeEEEEEcCCCCcccccceeccccCCCeEEEEecCCCeEEEee
Q 021744 235 MAVGND-LLFAGTQD----------------------GAILAWKFNVTTNCFEPAASLKVHTDSNRAHFSRDVTSLLGSV 291 (308)
Q Consensus 235 ~~~~~~-~l~~g~~d----------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~s~d~~~l~~s~ 291 (308)
++...+ +++.|+.+ ..+.+||+.+.+ ++.+..+......-. +...++++++.++
T Consensus 248 ~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~-~~~~~~~i~v~GG 324 (357)
T 2uvk_A 248 AGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGK--WDKSGELSQGRAYGV-SLPWNNSLLIIGG 324 (357)
T ss_dssp EEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----CEEEEECSSCCBSSE-EEEETTEEEEEEE
T ss_pred EEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCc--eeeCCCCCCCcccce-eEEeCCEEEEEee
Confidence 444555 66666632 257889988764 355544432222222 3334566555333
No 320
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.80 E-value=2.2 Score=39.34 Aligned_cols=145 Identities=10% Similarity=0.062 Sum_probs=76.4
Q ss_pred CCCe-eeccCC------CcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeCCC--eEEEEEcCCCceeeeEe
Q 021744 77 NTWG-RNNNFN------NHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEKCK--FLHSWTVGDGFKLLTQL 146 (308)
Q Consensus 77 ~g~~-~s~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~d~--~i~iwd~~~~~~~~~~~ 146 (308)
++.. +.|+.+ +.+.+||..+.+............-..+....++.+ +.|+.++ .+.+||+.+.. ...+
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~--W~~~ 528 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEI--FKDV 528 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTE--EEEC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCc--eEEc
Confidence 6666 777754 347788887654322111111111122222224544 7777654 68999998762 1122
Q ss_pred e------CcccceEEEEEeCC-CCEEEEeeC--C-----CcEEEEeCCCCeE-----EEEEe-C----CCeeEEEEcC-C
Q 021744 147 E------GHQKVVSGITLPSG-SDKLYSGSK--D-----ETVRVWDCASGQC-----AGVIN-L----GGEVGCMISE-G 201 (308)
Q Consensus 147 ~------~h~~~v~~~~~~~~-~~~l~s~s~--d-----g~v~~wd~~~~~~-----~~~~~-~----~~~v~~~~~~-~ 201 (308)
. .......++.+..+ +..++.|+. + ..+.+||+.+.+- ...+. . .....++..+ +
T Consensus 529 ~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~ 608 (695)
T 2zwa_A 529 TPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPR 608 (695)
T ss_dssp CCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETT
T ss_pred cCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCC
Confidence 1 11122233555655 566677765 2 4588999988761 12221 1 1112233334 7
Q ss_pred CEEEEEc-C--------CcEEEEEcCCCcee
Q 021744 202 PWIFIGV-T--------NFVKAWNTQTNTDL 223 (308)
Q Consensus 202 ~~l~~~~-d--------~~i~~wd~~~~~~~ 223 (308)
++++.|+ + ..+.+||+.+.+-.
T Consensus 609 ~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 609 KLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp EEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred EEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 7777654 2 36899999887654
No 321
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.76 E-value=2.3 Score=38.57 Aligned_cols=175 Identities=7% Similarity=-0.004 Sum_probs=96.9
Q ss_pred CCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce--EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCC
Q 021744 85 FNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC--MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGS 162 (308)
Q Consensus 85 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~ 162 (308)
..+.|+.-+++............-..+..+.+.+.+.. ++-...+.|..+++.........+...-.....+++++.+
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~ 95 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 95 (619)
T ss_dssp CSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTT
T ss_pred ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecC
Confidence 35567777775432111111111223566777775533 4445678888888875521122333333578899999866
Q ss_pred CEE-EEeeCCCcEEEEeCCCCeEEEEEe--CCCeeE-EEEcCCCEEEEEc---CCcEEEEEcCCCceeee-eCCCCCEEE
Q 021744 163 DKL-YSGSKDETVRVWDCASGQCAGVIN--LGGEVG-CMISEGPWIFIGV---TNFVKAWNTQTNTDLSL-SGPVGQVYA 234 (308)
Q Consensus 163 ~~l-~s~s~dg~v~~wd~~~~~~~~~~~--~~~~v~-~~~~~~~~l~~~~---d~~i~~wd~~~~~~~~~-~~~~~~v~~ 234 (308)
..| ++-...+.|.+.++........+. ...+.. ++.+.+..|+.+. .+.|...++.......+ ...-.....
T Consensus 96 ~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~G 175 (619)
T 3s94_A 96 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNG 175 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEE
T ss_pred CEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcE
Confidence 555 555567899999987544333332 222222 2345555555433 45777777775544433 233456889
Q ss_pred EEEeCC---EEEEEcCCCeEEEEEcCCC
Q 021744 235 MAVGND---LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 235 ~~~~~~---~l~~g~~dg~i~iwd~~~~ 259 (308)
|+++++ ++++-...+.|..+|+...
T Consensus 176 lald~~~~~LY~aD~~~~~I~~~~~dG~ 203 (619)
T 3s94_A 176 LTLDYEEQKLYWADAKLNFIHKSNLDGT 203 (619)
T ss_dssp EEEETTTTEEEEEETTTCCEEEESSSCC
T ss_pred EEEEccCCEEEEEeCCCCeEEEecCCCC
Confidence 999975 4555556778998888764
No 322
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.70 E-value=0.25 Score=38.29 Aligned_cols=146 Identities=11% Similarity=-0.027 Sum_probs=79.5
Q ss_pred cceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeE------EEEEeCCC--eeEEE--EcCCCEEEEEcCCcEEEEEcCCC
Q 021744 151 KVVSGITLPSGSDKLYSGSKDETVRVWDCASGQC------AGVINLGG--EVGCM--ISEGPWIFIGVTNFVKAWNTQTN 220 (308)
Q Consensus 151 ~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~------~~~~~~~~--~v~~~--~~~~~~l~~~~d~~i~~wd~~~~ 220 (308)
..+..++|+|++.+.+. .+|.+.-.+..+.+. -..+-... ...++ -+++.+.++ .|+.|.-++-.+.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQS 117 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCS
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcC
Confidence 46779999998875444 778777777655221 11121100 01233 256777777 7898888876443
Q ss_pred cee------eeeC--CCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCCCcc-cccceeccc--cCCCeEE-EEecCCCeE
Q 021744 221 TDL------SLSG--PVGQVYAMAVGND-LLFAGTQDGAILAWKFNVTTNC-FEPAASLKV--HTDSNRA-HFSRDVTSL 287 (308)
Q Consensus 221 ~~~------~~~~--~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~-~~~~~~~~~--~~~~v~~-~~s~d~~~l 287 (308)
... ...+ -=..+..|.+.|+ .|.+.. |+.++-......... +-...+..+ .-..-+. .|.+++.+.
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~ 196 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLF 196 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEE
T ss_pred CCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEE
Confidence 221 1111 1136799999999 555555 888554333321100 000111111 1223344 789999887
Q ss_pred EEeeceEEEEeecC
Q 021744 288 LGSVSFIMFIGQNN 301 (308)
Q Consensus 288 ~~s~s~~i~~~~~~ 301 (308)
+++ +..+|....+
T Consensus 197 ~v~-~g~~Y~~~~p 209 (236)
T 1tl2_A 197 GVQ-GGKFYEDYPP 209 (236)
T ss_dssp EEE-TTEEEEESCC
T ss_pred EEe-CCeEEecCCc
Confidence 777 7777765543
No 323
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.24 E-value=2.4 Score=36.42 Aligned_cols=150 Identities=12% Similarity=0.104 Sum_probs=90.1
Q ss_pred ecCCCeeeccCCCcEEEEECCCCCCccccccee----eeeeeeeeeecCCceEEeeCCCeEEEEEcCCCce---------
Q 021744 75 ANNTWGRNNNFNNHSNNYRAGNSKNSNINNRAV----IKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFK--------- 141 (308)
Q Consensus 75 s~~g~~~s~~~d~~i~vwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~--------- 141 (308)
+.+|..+.-..++.||.-++.....- ...... -..+..+..+|+|.+++-..+..|.|-.+..+..
T Consensus 29 ~~n~t~i~~a~~n~iR~~~i~~~~~Y-k~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 29 SQNGTRIVFIQDNIIRWYNVLTDSLY-HSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp ETTTTEEEEEETTEEEEEETTTCSSC-EEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHH
T ss_pred EcCCCEEEEEECCEEEEEECCCCCcc-eEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCccccccc
Confidence 44454455556788998888643211 111111 1135668889999886666677888888873310
Q ss_pred --eeeEeeC------cccceEEEEEeCC---CCEEEEeeCCCcEEEEeCCCC--eEEEEEeCCCeeEEEEcCCCEEEEEc
Q 021744 142 --LLTQLEG------HQKVVSGITLPSG---SDKLYSGSKDETVRVWDCASG--QCAGVINLGGEVGCMISEGPWIFIGV 208 (308)
Q Consensus 142 --~~~~~~~------h~~~v~~~~~~~~---~~~l~s~s~dg~v~~wd~~~~--~~~~~~~~~~~v~~~~~~~~~l~~~~ 208 (308)
..+.+.- ...+|..+.|+|- +..|++-..|++|++||+... ++. .++...
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~---------------- 170 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPN---------------- 170 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCC----------------
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccc----------------
Confidence 1122221 2467999999995 467999999999999999862 222 222110
Q ss_pred CCcEEEEEcCCCceeeeeCCCCCEEEEEEeCC----EEEEEcCCCeEEEE
Q 021744 209 TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND----LLFAGTQDGAILAW 254 (308)
Q Consensus 209 d~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~----~l~~g~~dg~i~iw 254 (308)
...........|.+++|.++ ++++.+..|.|+-.
T Consensus 171 ------------~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 171 ------------NSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ------------SEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ------------cccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 01111223357788888877 55556677877654
No 324
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.20 E-value=4.6 Score=39.63 Aligned_cols=152 Identities=13% Similarity=0.130 Sum_probs=86.6
Q ss_pred eEEEEEcCCCceeeeEeeC-cccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEE--EEEeCCCeeEEEEc----C--
Q 021744 130 FLHSWTVGDGFKLLTQLEG-HQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCA--GVINLGGEVGCMIS----E-- 200 (308)
Q Consensus 130 ~i~iwd~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~--~~~~~~~~v~~~~~----~-- 200 (308)
.|++.+.... ..+..++. ....|...+.+. .+++.++ ++.+.++.+..++.. .....+..+.|+.- +
T Consensus 493 ~Irli~~~~~-~~~~~w~~p~~~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~ 568 (1158)
T 3ei3_A 493 SVRLVSQEPK-ALVSEWKEPQAKNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSN 568 (1158)
T ss_dssp CEEEEESSSC-CEEEEECCTTCCCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSST
T ss_pred EEEEEECCCC-eEEEEEECCCCCEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCc
Confidence 4555555443 33444442 223566666553 3555554 577888877765432 23336678888842 1
Q ss_pred --CCEEEEEc--CCcEEEEEcCCCceeeeeC--CCCCEEEEEEe---CC-EEEEEcCCCeEEEEEcCCCCcccccceecc
Q 021744 201 --GPWIFIGV--TNFVKAWNTQTNTDLSLSG--PVGQVYAMAVG---ND-LLFAGTQDGAILAWKFNVTTNCFEPAASLK 270 (308)
Q Consensus 201 --~~~l~~~~--d~~i~~wd~~~~~~~~~~~--~~~~v~~~~~~---~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~ 270 (308)
.+++++|. |++++++++.+.+.+.... ......++.+. .. +|..|-.||.+.-+.+..........++..
T Consensus 569 ~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~ 648 (1158)
T 3ei3_A 569 GLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT 648 (1158)
T ss_dssp TCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEE
T ss_pred ccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEE
Confidence 46888776 8899999999877663221 12345555554 23 889999999987776654221111111122
Q ss_pred ccCCCeEE-EEecCCC
Q 021744 271 VHTDSNRA-HFSRDVT 285 (308)
Q Consensus 271 ~~~~~v~~-~~s~d~~ 285 (308)
--..++.. .|...+.
T Consensus 649 LG~~pv~L~~~~~~~~ 664 (1158)
T 3ei3_A 649 LGTQPTVLRTFRSLST 664 (1158)
T ss_dssp CCSSCCEEEEEESSSC
T ss_pred cCCCceEEEEEeeCCc
Confidence 22446666 6665544
No 325
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.11 E-value=3.3 Score=37.64 Aligned_cols=175 Identities=9% Similarity=0.015 Sum_probs=106.3
Q ss_pred cCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce--EEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCC
Q 021744 84 NFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC--MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSG 161 (308)
Q Consensus 84 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~ 161 (308)
+....|+.-++++.+.........-..+..+.|.+.+.. ++...++.|+.+++... .....+.........+++++.
T Consensus 12 s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~-~~~~v~~~g~~~P~GlAvD~~ 90 (628)
T 4a0p_A 12 SRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGS-ALEHVVEFGLDYPEGMAVDWL 90 (628)
T ss_dssp EETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSSCSCCCEEEEETT
T ss_pred EeCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCC-CcEEEEeCCCCCcceEEEEeC
Confidence 356678888887543221111111223567788876533 55567889999988755 222233322345678999876
Q ss_pred CCEE-EEeeCCCcEEEEeCCCCeEEEEEe--CCCeeE-EEEcCCCEEEEEc---CCcEEEEEcCCCceeeeeCCCCCEEE
Q 021744 162 SDKL-YSGSKDETVRVWDCASGQCAGVIN--LGGEVG-CMISEGPWIFIGV---TNFVKAWNTQTNTDLSLSGPVGQVYA 234 (308)
Q Consensus 162 ~~~l-~s~s~dg~v~~wd~~~~~~~~~~~--~~~~v~-~~~~~~~~l~~~~---d~~i~~wd~~~~~~~~~~~~~~~v~~ 234 (308)
+..| ++-...+.|.+.++........+. ...+.. ++.|....|+.+. .+.|...++.......+...-.....
T Consensus 91 ~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~G 170 (628)
T 4a0p_A 91 GKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANG 170 (628)
T ss_dssp TTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEE
T ss_pred CCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcce
Confidence 6555 555567789999987543322232 223322 2245455555433 56888888877665544444567899
Q ss_pred EEEeCC---EEEEEcCCCeEEEEEcCCC
Q 021744 235 MAVGND---LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 235 ~~~~~~---~l~~g~~dg~i~iwd~~~~ 259 (308)
|+++++ ++++-...+.|..+|+...
T Consensus 171 lalD~~~~~LY~aD~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 171 LTIDYAKRRLYWTDLDTNLIESSNMLGL 198 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEccccCEEEEEECCCCEEEEEcCCCC
Confidence 999985 5555566789999999764
No 326
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.10 E-value=1.4 Score=34.13 Aligned_cols=100 Identities=7% Similarity=-0.262 Sum_probs=56.6
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeee--------eeeeeecCCceEEeeCCCeEEEEEcCCCce
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTD--------ILCRNWVQGNCMYGEKCKFLHSWTVGDGFK 141 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~ 141 (308)
.++|+|+|.+ +. .++.+.--+..+.+. .........+ ..+.|.++|.+... .||.|+-++..+...
T Consensus 45 ~laf~P~G~LYaV--~~G~Ly~~~~~t~~~--~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~ 119 (236)
T 1tl2_A 45 FLFLSPGGELYGV--LNDKIYKGTPPTHDN--DNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQSDT 119 (236)
T ss_dssp EEEECTTSCEEEE--ETTEEEEESCCCSTT--CCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCSTT
T ss_pred eEEECCCccEEEE--eCCeEEEECCCCCCc--ccccccccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcCCC
Confidence 7999999998 66 566544444322111 1111111222 56677788877444 669998888644211
Q ss_pred eee----Ee--eCcccceEEEEEeCCCCEEEEeeCCCcEEEE
Q 021744 142 LLT----QL--EGHQKVVSGITLPSGSDKLYSGSKDETVRVW 177 (308)
Q Consensus 142 ~~~----~~--~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~w 177 (308)
.-. +. .+-=..+..+.+.|++.+.+.. |+.++-+
T Consensus 120 ~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~ 159 (236)
T 1tl2_A 120 DNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKA 159 (236)
T ss_dssp CCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEE
T ss_pred CceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEec
Confidence 100 11 1112577999999999766555 7775433
No 327
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=93.94 E-value=2.3 Score=35.15 Aligned_cols=148 Identities=7% Similarity=-0.051 Sum_probs=92.1
Q ss_pred eeEEecCCCe--eeccCCCcEEEEECCCCCCcccccce-----e-eeeeeeeee---ecCCce-EEee------------
Q 021744 71 AKRFANNTWG--RNNNFNNHSNNYRAGNSKNSNINNRA-----V-IKTDILCRN---WVQGNC-MYGE------------ 126 (308)
Q Consensus 71 ~i~~s~~g~~--~s~~~d~~i~vwd~~~~~~~~~~~~~-----~-~~~~~~~~~---~~~~~~-~~g~------------ 126 (308)
+++|.+.... ++.-..++|..||...+......... . ...+..+.+ -+++++ +...
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~ 96 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSS 96 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCS
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccccc
Confidence 5789875555 66668999999998644322111111 1 112345556 366655 3222
Q ss_pred -CCCeEEEEEcC---CCceeeeEee--Ccc-----------cceEEEEEeCCCCEEEEeeCC-CcEEEEeCCCCeEEEEE
Q 021744 127 -KCKFLHSWTVG---DGFKLLTQLE--GHQ-----------KVVSGITLPSGSDKLYSGSKD-ETVRVWDCASGQCAGVI 188 (308)
Q Consensus 127 -~d~~i~iwd~~---~~~~~~~~~~--~h~-----------~~v~~~~~~~~~~~l~s~s~d-g~v~~wd~~~~~~~~~~ 188 (308)
.+..|..||+. ++ +.+.... ... .....+++.++|+.-++++.- +.|...+.... .+..+
T Consensus 97 ~g~~~v~~~Dl~~~~tg-~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~ 174 (334)
T 2p9w_A 97 HGASSFHSFNLPLSENS-KPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVSTF 174 (334)
T ss_dssp SSCCEEEEEESSCCTTC-CCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEEEE
T ss_pred CCCCEEEEEcCCcCCCC-CEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEeee
Confidence 26789999998 66 3443332 111 247899999999999988888 88888876643 33333
Q ss_pred e-CCCe--------eEEEEcCCCEEEEEc-CCcEEEEEcCCC
Q 021744 189 N-LGGE--------VGCMISEGPWIFIGV-TNFVKAWNTQTN 220 (308)
Q Consensus 189 ~-~~~~--------v~~~~~~~~~l~~~~-d~~i~~wd~~~~ 220 (308)
. .... -..+.|+++.|++.. .+.+..+|+++.
T Consensus 175 ~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred eecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 2 1111 123468898888654 889999998854
No 328
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.87 E-value=4.1 Score=37.83 Aligned_cols=214 Identities=9% Similarity=0.060 Sum_probs=110.6
Q ss_pred eeEEecCCCeeeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCcc
Q 021744 71 AKRFANNTWGRNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQ 150 (308)
Q Consensus 71 ~i~~s~~g~~~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~ 150 (308)
+|.-..+|..-.|..+| +..||-..-+............+.++....++.+..|..+| +..||..+. +.........
T Consensus 26 ~I~qD~~G~lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigT~~G-l~~yd~~~~-~f~~~~~~~~ 102 (758)
T 3ott_A 26 CFLQDSEGLIWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNTYLYMGTDNG-ILVYNYRAD-RYEQPETDFP 102 (758)
T ss_dssp EEEECTTSCEEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTTEEEEEETTE-EEEEETTTT-EECCCSCCCC
T ss_pred EEEECCCCCEEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCCcEEEEeCCC-eEEEeCCCC-EEECcccCCC
Confidence 45555666663344566 55565321110000001111235555555666666666554 788998876 3322111122
Q ss_pred cceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe------CCCeeEEEEc--CCCEEEEEcCCcEEEEEcCCCce
Q 021744 151 KVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN------LGGEVGCMIS--EGPWIFIGVTNFVKAWNTQTNTD 222 (308)
Q Consensus 151 ~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~------~~~~v~~~~~--~~~~l~~~~d~~i~~wd~~~~~~ 222 (308)
..|.++... ++ .|..++.+ -+..+|..+++.. .+. ....+.++.. ++.+.+ +..+-+..+|..+++.
T Consensus 103 ~~i~~i~~~-~g-~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~Gl~~~~~~~~~~ 177 (758)
T 3ott_A 103 TDVRTMALQ-GD-TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYNGLCRYIPSNGKF 177 (758)
T ss_dssp SCEEEEEEE-TT-EEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCCEEE-EETTEEEEEETTTTEE
T ss_pred ceEEEEEec-CC-cEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCCEEE-EeCCCHhhCccCCCce
Confidence 356666543 44 45555665 5888998766543 331 2334666653 455544 4445688889877654
Q ss_pred eeeeCC------CCCEEEEEEeCC--EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEeece
Q 021744 223 LSLSGP------VGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSVSF 293 (308)
Q Consensus 223 ~~~~~~------~~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~s~ 293 (308)
..+... ...|.++...++ .|..|+. +-+..+|..++.. .....+ ....|.+ ...++|.+.+++..
T Consensus 178 ~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~--~~~~~l--~~~~i~~i~~d~~g~lWigT~~- 251 (758)
T 3ott_A 178 EGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQI--KQTEAF--HNNSIKSLALDGNGDLLAGTDN- 251 (758)
T ss_dssp EEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEE--EEEEEE--EEEEEEEEEECTTCCEEEEETT-
T ss_pred EEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeE--EeccCC--CCCeEEEEEEcCCCCEEEEeCC-
Confidence 432211 234888888764 4555664 4577888776421 111111 1234555 55566766665532
Q ss_pred EEEEe
Q 021744 294 IMFIG 298 (308)
Q Consensus 294 ~i~~~ 298 (308)
.++..
T Consensus 252 Gl~~~ 256 (758)
T 3ott_A 252 GLYVY 256 (758)
T ss_dssp EEEEE
T ss_pred ceeEE
Confidence 34443
No 329
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=93.58 E-value=2.8 Score=34.95 Aligned_cols=215 Identities=9% Similarity=-0.081 Sum_probs=105.9
Q ss_pred eeEEecCCCeeeccCCCcEEEEECCCCCCccc---ccc-eeeeeeeeeeeecC----Cce-EEeeCC-----CeEEEEEc
Q 021744 71 AKRFANNTWGRNNNFNNHSNNYRAGNSKNSNI---NNR-AVIKTDILCRNWVQ----GNC-MYGEKC-----KFLHSWTV 136 (308)
Q Consensus 71 ~i~~s~~g~~~s~~~d~~i~vwd~~~~~~~~~---~~~-~~~~~~~~~~~~~~----~~~-~~g~~d-----~~i~iwd~ 136 (308)
.++|.|+|....+..++.|++++ .++.... ... ........+++.|+ +.+ ++-... +.|..++.
T Consensus 35 ~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~ 112 (352)
T 2ism_A 35 ALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRH 112 (352)
T ss_dssp EEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEE
T ss_pred EEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEe
Confidence 69999999883345568899888 3321100 000 00123566788887 433 333322 67777877
Q ss_pred CCCc-----eeeeEee---CcccceEEEEEeCCCCEEEEeeC-------------CCcEEEEeCCCC-------------
Q 021744 137 GDGF-----KLLTQLE---GHQKVVSGITLPSGSDKLYSGSK-------------DETVRVWDCASG------------- 182 (308)
Q Consensus 137 ~~~~-----~~~~~~~---~h~~~v~~~~~~~~~~~l~s~s~-------------dg~v~~wd~~~~------------- 182 (308)
.... ..+..+. +.......++|.|++.+.++.+. .+.|.-++....
T Consensus 113 ~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~ 192 (352)
T 2ism_A 113 LGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGA 192 (352)
T ss_dssp CSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTS
T ss_pred CCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCC
Confidence 6431 1222233 11112368999999976666432 245665655420
Q ss_pred -eEEEEEeCCCeeE-EEEc-CCCEEEEEc--CC-------cEEEEEcCCCc------------------ee-eeeCCCCC
Q 021744 183 -QCAGVINLGGEVG-CMIS-EGPWIFIGV--TN-------FVKAWNTQTNT------------------DL-SLSGPVGQ 231 (308)
Q Consensus 183 -~~~~~~~~~~~v~-~~~~-~~~~l~~~~--d~-------~i~~wd~~~~~------------------~~-~~~~~~~~ 231 (308)
..+...-+..+.. ++.+ +++++++-. +. .|.+. ..+. +. .+ .+...
T Consensus 193 ~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i--~~G~nyGwp~~~g~~~~~~~~~p~~~~-~~~~a 269 (352)
T 2ism_A 193 RPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLI--VPGGNYGWPRVVGRGNDPRYRDPLYFW-PQGFP 269 (352)
T ss_dssp CTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEE--CTTCBCCTTTCCSCCCCTTSCCCSEEC-TTCCC
T ss_pred CccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEe--ccCCcCCCCcccCCCCCCCCcCCeEec-CCCCC
Confidence 1111111222222 2335 455555422 22 13332 2221 11 12 22235
Q ss_pred EEEEEEeCC-EEEEEcCCCeEEEEEcCCCCccc--ccceeccccCCCeEE-EEecCCCeEEEe
Q 021744 232 VYAMAVGND-LLFAGTQDGAILAWKFNVTTNCF--EPAASLKVHTDSNRA-HFSRDVTSLLGS 290 (308)
Q Consensus 232 v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~v~~-~~s~d~~~l~~s 290 (308)
...++|... ++++.-..+.|...++....... .....+......+.. ++.|||.+.++.
T Consensus 270 p~G~~~~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~ 332 (352)
T 2ism_A 270 PGNLAFFRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTT 332 (352)
T ss_dssp EEEEEEETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEE
T ss_pred CcceEEECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEE
Confidence 677888655 55555666788888876542100 001222122245556 999999766654
No 330
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=92.65 E-value=4.6 Score=34.88 Aligned_cols=167 Identities=10% Similarity=0.092 Sum_probs=104.6
Q ss_pred CCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCE
Q 021744 85 FNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDK 164 (308)
Q Consensus 85 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 164 (308)
.+.+|-|-|+.++..... + .-..-..-.+|....++--....+.|+|+++. +.++.+.- ...|.-..|-.+ +.
T Consensus 46 ~~~~vvIiDl~~~~~~~r--r--pi~AdsAIMnP~~~iiALrag~~lQiFnle~K-~klks~~~-~e~VvfWkWis~-~~ 118 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIR--R--PISADSAIMNPASKVIALKAGKTLQIFNIEMK-SKMKAHTM-TDDVTFWKWISL-NT 118 (494)
T ss_dssp TCCEEEEEETTSTTSCEE--E--ECCCSEEEECSSSSCEEEEETTEEEEEETTTT-EEEEEEEC-SSCCCEEEEEET-TE
T ss_pred CCCeEEEEECCCCCccee--c--ccccceeeeCCCCcEEEEecCCeEEEEchHHh-hhhcceec-CCCceEEEecCC-Ce
Confidence 344788889876544311 1 11122233455554433233789999999998 66666653 457778888644 34
Q ss_pred EEEeeCCCcEEEEeCCC-CeEEEEEeC-----CCeeEEE--EcCCCEEEE-Ec-------CCcEEEEEcCCCceeeeeCC
Q 021744 165 LYSGSKDETVRVWDCAS-GQCAGVINL-----GGEVGCM--ISEGPWIFI-GV-------TNFVKAWNTQTNTDLSLSGP 228 (308)
Q Consensus 165 l~s~s~dg~v~~wd~~~-~~~~~~~~~-----~~~v~~~--~~~~~~l~~-~~-------d~~i~~wd~~~~~~~~~~~~ 228 (308)
|+-.+ +..|+-|++.. ..+++.+.. ...+... .++.++++. |- .|.+.+|..+.+..+.+.+|
T Consensus 119 l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGh 197 (494)
T 1bpo_A 119 VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGH 197 (494)
T ss_dssp EEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCS
T ss_pred EEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheee
Confidence 54443 46799999974 467777762 2333333 467888773 31 45788999999888888888
Q ss_pred CCCEEEEEEeCC-----EEEEEcCC---CeEEEEEcCCC
Q 021744 229 VGQVYAMAVGND-----LLFAGTQD---GAILAWKFNVT 259 (308)
Q Consensus 229 ~~~v~~~~~~~~-----~l~~g~~d---g~i~iwd~~~~ 259 (308)
......+.+..+ .++.+... ++++|.++...
T Consensus 198 aa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~ 236 (494)
T 1bpo_A 198 AASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTP 236 (494)
T ss_dssp EEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCC
T ss_pred eeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCC
Confidence 766655555432 44444432 78999998654
No 331
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=92.06 E-value=4.2 Score=33.05 Aligned_cols=176 Identities=15% Similarity=0.119 Sum_probs=84.8
Q ss_pred eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEeeC----CC-------eEEEEEcCCCc-eeeeEee
Q 021744 81 RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGEK----CK-------FLHSWTVGDGF-KLLTQLE 147 (308)
Q Consensus 81 ~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~----d~-------~i~iwd~~~~~-~~~~~~~ 147 (308)
+.|+. .+..||..+.+....................++.. +.|+. ++ .+.+||+.+.. +.+..+.
T Consensus 20 ~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p 97 (318)
T 2woz_A 20 LVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLP 97 (318)
T ss_dssp EECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBS
T ss_pred hcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCC
Confidence 45553 37888887665322111000011111122234444 66662 11 27788887762 1111121
Q ss_pred CcccceEEEEEeCCCCEEEEeeCC-------CcEEEEeCCCCeEEEEEeCCCe---eEEEEcCCCEEEEEc-------CC
Q 021744 148 GHQKVVSGITLPSGSDKLYSGSKD-------ETVRVWDCASGQCAGVINLGGE---VGCMISEGPWIFIGV-------TN 210 (308)
Q Consensus 148 ~h~~~v~~~~~~~~~~~l~s~s~d-------g~v~~wd~~~~~~~~~~~~~~~---v~~~~~~~~~l~~~~-------d~ 210 (308)
..... .+++.. ++..++.|+.+ ..+.+||+.+.+-...-..+.+ ..++..++++++.|. ..
T Consensus 98 ~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 175 (318)
T 2woz_A 98 SARCL-FGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTN 175 (318)
T ss_dssp SCBCS-CEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCC
T ss_pred ccccc-cceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccc
Confidence 11111 222222 45666677654 3578889887754432222211 123345677666654 13
Q ss_pred cEEEEEcCCCceeeeeCCC--CCEEEEEEeCC-EEEEEcCC-----CeEEEEEcCCCC
Q 021744 211 FVKAWNTQTNTDLSLSGPV--GQVYAMAVGND-LLFAGTQD-----GAILAWKFNVTT 260 (308)
Q Consensus 211 ~i~~wd~~~~~~~~~~~~~--~~v~~~~~~~~-~l~~g~~d-----g~i~iwd~~~~~ 260 (308)
.+.+||+.+.+-..+.... ..-.+++...+ +++.|+.+ ..+.+||+.+.+
T Consensus 176 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 176 RVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred eEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 5899999988655332111 11123344455 55555543 347788888764
No 332
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=91.65 E-value=5.3 Score=33.40 Aligned_cols=160 Identities=12% Similarity=0.073 Sum_probs=84.1
Q ss_pred CCCeEEEEEcCCC--ceeeeEeeC-----cccceEEEEEeC--CCC-EEEEe-eC--CCcEEEEeCCCC--eE--EEEEe
Q 021744 127 KCKFLHSWTVGDG--FKLLTQLEG-----HQKVVSGITLPS--GSD-KLYSG-SK--DETVRVWDCASG--QC--AGVIN 189 (308)
Q Consensus 127 ~d~~i~iwd~~~~--~~~~~~~~~-----h~~~v~~~~~~~--~~~-~l~s~-s~--dg~v~~wd~~~~--~~--~~~~~ 189 (308)
.+|.|.++|+++. +...-.+.+ ..-....+.+.+ ++. +|+.+ .. +.+|.+|++... .. +..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 6899999998743 111112222 223567777765 343 34333 33 467778776543 22 22232
Q ss_pred CC--CeeEEE--EcCCCEEEEEc----C--------------CcEEEEEcCCCceeeeeCCCCCEEEEEEeCC---EEEE
Q 021744 190 LG--GEVGCM--ISEGPWIFIGV----T--------------NFVKAWNTQTNTDLSLSGPVGQVYAMAVGND---LLFA 244 (308)
Q Consensus 190 ~~--~~v~~~--~~~~~~l~~~~----d--------------~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~---~l~~ 244 (308)
.. .....+ .++|.+.++.. | +.|..+|. ++...+...-...+.++|+|| ++++
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYva 238 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYIA 238 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEEE
Confidence 21 112222 46777766542 1 34444544 333333333346789999999 4555
Q ss_pred EcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEec-CCCeEEEe
Q 021744 245 GTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSR-DVTSLLGS 290 (308)
Q Consensus 245 g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~-d~~~l~~s 290 (308)
-+..+.|..|++..... ......+. .....-. ++.+ +|.+.+++
T Consensus 239 dt~~~~I~~~~~~~~g~-l~~~~~~~-~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 239 ELLAHKIHVYEKHANWT-LTPLRVLS-FDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp EGGGTEEEEEEECTTSC-EEEEEEEE-CSSEEEEEEECTTTCCEEEEE
T ss_pred eCCCCeEEEEEECCCCc-EecCEEEe-CCCCCceEEEeCCCCcEEEEe
Confidence 66788999999874211 12222332 1233333 6777 47766644
No 333
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=90.69 E-value=5.6 Score=31.96 Aligned_cols=202 Identities=12% Similarity=0.044 Sum_probs=102.5
Q ss_pred CCeEEEeecCCCCCCCCCcccccCCCCCCccccccceeEEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeee
Q 021744 35 QKVCNYWRAGKCNRFPCPYLHRELPLPPAATANGAAAKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDIL 113 (308)
Q Consensus 35 d~~i~~W~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 113 (308)
|+.++.|-..... .+..|...... -+.++.-..+ +.-. |+.|..|-.+..-++..+.... ..+..
T Consensus 41 ~G~v~~wG~n~~G-----------qlg~p~~~~~~-i~~ia~G~~hs~~l~-~G~v~~wG~n~~Gqlg~P~~~~-~~v~~ 106 (282)
T 3qhy_B 41 GGKVLGWGANLNG-----------QLTMPAATQSG-VDAIAAGNYHSLALK-DGEVIAWGGNEDGQTTVPAEAR-SGVDA 106 (282)
T ss_dssp TTEEEEEECCSSS-----------TTSCCGGGGSC-CCEEEECSSEEEEEE-TTEEEEEECCTTSTTCCCGGGS-SSEEE
T ss_pred CCEEEEEeCCCCC-----------CCCCCccCCCC-EEEEEeCCCEEEEEE-CCEEEEeeCCCCCCCCCCcccC-CCeEE
Confidence 8999999755431 11111111111 2344444445 3334 8999999876543333222211 12333
Q ss_pred eeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEE-EEeCCC
Q 021744 114 CRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAG-VINLGG 192 (308)
Q Consensus 114 ~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~-~~~~~~ 192 (308)
+..-..-. +.-. +|.|+.|-.....++ ..-......|..++.-... .+.-. ||.|..|-......+. ......
T Consensus 107 ia~G~~hs-~al~-~G~v~~wG~n~~gql-g~~~~~~~~i~~i~~G~~~--~~~l~-~G~v~~wG~n~~gqlg~p~~~~~ 180 (282)
T 3qhy_B 107 IAAGAWAS-YALK-DGKVIAWGDDSDGQT-TVPAEAQSGVTALDGGVYT--ALAVK-NGGVIAWGDNYFGQTTVPAEAQS 180 (282)
T ss_dssp EEEETTEE-EEEE-TTEEEEEECCTTSTT-SCCGGGGSSEEEEEECSSE--EEEEE-TTEEEEEECCTTSTTSCCGGGGS
T ss_pred EECcCCEE-EEEe-CCeEEEecCCCCCcC-CCCccCCCCeEEEEcccCE--EEEEE-CCEEEEecCCCCCCCCCceecCC
Confidence 33222222 3334 899999987643121 1111123456666654332 22233 7999999765422111 111223
Q ss_pred eeEEEEc-CCCEEEEEcCCcEEEEEcCCCcee-eeeCCCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCC
Q 021744 193 EVGCMIS-EGPWIFIGVTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 193 ~v~~~~~-~~~~l~~~~d~~i~~wd~~~~~~~-~~~~~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~ 259 (308)
.+..+.. ....++. .++.|..|-....-.+ .-......|..++.... .++.. ||.|+.|=....
T Consensus 181 ~v~~i~~G~~hs~al-~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~--~g~v~~wG~n~~ 247 (282)
T 3qhy_B 181 GVDDVAGGIFHSLAL-KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK--NGKVIAWGSSRT 247 (282)
T ss_dssp SEEEEEECSSEEEEE-ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE--TTEEEEESTTCC
T ss_pred CeEEEEecCCEEEEE-ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE--CCEEEEecCCCC
Confidence 4555543 3444556 7899999976543222 11111235777777666 55544 999999976553
No 334
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=88.86 E-value=7.9 Score=31.05 Aligned_cols=176 Identities=15% Similarity=0.049 Sum_probs=93.1
Q ss_pred EEecCCCe-eeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEeeCccc
Q 021744 73 RFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQK 151 (308)
Q Consensus 73 ~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~~h~~ 151 (308)
.++.-..+ +.-. |+.|..|-.+..-++..+.... ..+..+..-..-.++. . ||.|+.|-....-+ +..-..-..
T Consensus 28 ~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~-~~i~~ia~G~~hs~~l-~-~G~v~~wG~n~~Gq-lg~P~~~~~ 102 (282)
T 3qhy_B 28 AIAGGYFHGLALK-GGKVLGWGANLNGQLTMPAATQ-SGVDAIAAGNYHSLAL-K-DGEVIAWGGNEDGQ-TTVPAEARS 102 (282)
T ss_dssp EEEECSSEEEEEE-TTEEEEEECCSSSTTSCCGGGG-SCCCEEEECSSEEEEE-E-TTEEEEEECCTTST-TCCCGGGSS
T ss_pred EEEeCCCeEEEEE-CCEEEEEeCCCCCCCCCCccCC-CCEEEEEeCCCEEEEE-E-CCEEEEeeCCCCCC-CCCCcccCC
Confidence 44444445 3335 9999999876543333222111 1233333222223333 3 89999998764311 111011124
Q ss_pred ceEEEEEeCCCCEEEEeeCCCcEEEEeCCC-CeEEEEEeCCCeeEEEEcCCC-EEEEEcCCcEEEEEcCCCcee-eeeCC
Q 021744 152 VVSGITLPSGSDKLYSGSKDETVRVWDCAS-GQCAGVINLGGEVGCMISEGP-WIFIGVTNFVKAWNTQTNTDL-SLSGP 228 (308)
Q Consensus 152 ~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~-~~~~~~~~~~~~v~~~~~~~~-~l~~~~d~~i~~wd~~~~~~~-~~~~~ 228 (308)
.|..++.-.. +.+.-. ||.|..|-... ++.-........+..+..... .++.. ++.|..|-......+ .-...
T Consensus 103 ~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n~~gqlg~p~~~ 178 (282)
T 3qhy_B 103 GVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAVK-NGGVIAWGDNYFGQTTVPAEA 178 (282)
T ss_dssp SEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEEE-TTEEEEEECCTTSTTSCCGGG
T ss_pred CeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEEEE-CCEEEEecCCCCCCCCCceec
Confidence 6777776544 333334 89999997654 222111112234555544333 33344 889999976543222 11112
Q ss_pred CCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCC
Q 021744 229 VGQVYAMAVGND-LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 229 ~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~ 259 (308)
...|..++.... .++. .||.|+.|=....
T Consensus 179 ~~~v~~i~~G~~hs~al--~~G~v~~wG~n~~ 208 (282)
T 3qhy_B 179 QSGVDDVAGGIFHSLAL--KDGKVIAWGDNRY 208 (282)
T ss_dssp GSSEEEEEECSSEEEEE--ETTEEEEEECCTT
T ss_pred CCCeEEEEecCCEEEEE--ECCeEEEEECCCC
Confidence 356888888777 5555 5999999976653
No 335
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=88.16 E-value=16 Score=33.78 Aligned_cols=179 Identities=13% Similarity=0.127 Sum_probs=100.8
Q ss_pred eeEEecCCCeeeccCCCcEEEEECCCCCCcccccceeeeeeeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEee---
Q 021744 71 AKRFANNTWGRNNNFNNHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLE--- 147 (308)
Q Consensus 71 ~i~~s~~g~~~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~--- 147 (308)
++....+|.+-.|+.+| +..||..+.+... ........+..+. ..++.+..+..+ -+..+|..+. + +..+.
T Consensus 67 ~i~~d~~g~lWigT~~G-l~~yd~~~~~f~~-~~~~~~~~i~~i~-~~~g~lWigt~~-Gl~~~~~~~~-~-~~~~~~~~ 140 (758)
T 3ott_A 67 CGVIIDNTYLYMGTDNG-ILVYNYRADRYEQ-PETDFPTDVRTMA-LQGDTLWLGALN-GLYTYQLQSR-K-LTSFDTRR 140 (758)
T ss_dssp EEEEETTTEEEEEETTE-EEEEETTTTEECC-CSCCCCSCEEEEE-EETTEEEEEETT-EEEEEETTTC-C-EEEECHHH
T ss_pred EEEEcCCCcEEEEeCCC-eEEEeCCCCEEEC-cccCCCceEEEEE-ecCCcEEEEcCC-cceeEeCCCC-e-EEEeccCC
Confidence 45556666663444455 7889986553221 1111111233333 245666556655 6788888765 2 22231
Q ss_pred --CcccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEeC-------CCeeEEEEc--CCCEEEEEcCCcEEEEE
Q 021744 148 --GHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINL-------GGEVGCMIS--EGPWIFIGVTNFVKAWN 216 (308)
Q Consensus 148 --~h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~-------~~~v~~~~~--~~~~l~~~~d~~i~~wd 216 (308)
.....|.++...+++.+.+ ++.+ -+..++..+++.. .+.. ...+.++.. ++..|.+|.++-+..+|
T Consensus 141 ~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~Gl~~~~ 217 (758)
T 3ott_A 141 NGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGYLFQYF 217 (758)
T ss_dssp HCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEEEEEEEEEEE
T ss_pred CCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceE-EecCCCccccccceeEEEEEECCCCEEEEEECCCCeEEc
Confidence 1134688888887777655 4444 4778888776543 2221 123566643 45555555555688899
Q ss_pred cCCCceeeee-CCCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCC
Q 021744 217 TQTNTDLSLS-GPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 217 ~~~~~~~~~~-~~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~ 259 (308)
..+++...+. .....|.++...++ .|..|+.+ -+.+++..+.
T Consensus 218 ~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~~~~~~ 261 (758)
T 3ott_A 218 PSTGQIKQTEAFHNNSIKSLALDGNGDLLAGTDN-GLYVYHNDTT 261 (758)
T ss_dssp TTTTEEEEEEEEEEEEEEEEEECTTCCEEEEETT-EEEEECCTTS
T ss_pred CCCCeEEeccCCCCCeEEEEEEcCCCCEEEEeCC-ceeEEecCCC
Confidence 8877654221 12345888888776 55556654 5777876653
No 336
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=87.27 E-value=12 Score=31.12 Aligned_cols=70 Identities=11% Similarity=0.104 Sum_probs=45.4
Q ss_pred eeeeeeecCCceEEeeCCCeEEEEEcCCCc-eeeeEee---CcccceEEEEEeCC---CCEEEEe-eCC-----CcEEEE
Q 021744 111 DILCRNWVQGNCMYGEKCKFLHSWTVGDGF-KLLTQLE---GHQKVVSGITLPSG---SDKLYSG-SKD-----ETVRVW 177 (308)
Q Consensus 111 ~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~-~~~~~~~---~h~~~v~~~~~~~~---~~~l~s~-s~d-----g~v~~w 177 (308)
...+.+.++|.+..+..++.|++++ ++. +.+..+. ........++++|+ +..|+.+ ... ..|..+
T Consensus 33 P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~ 110 (352)
T 2ism_A 33 PWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRL 110 (352)
T ss_dssp EEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEE
T ss_pred ceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEE
Confidence 5678889999887777779999998 331 2222221 22456789999998 5555443 332 568888
Q ss_pred eCCCC
Q 021744 178 DCASG 182 (308)
Q Consensus 178 d~~~~ 182 (308)
+...+
T Consensus 111 ~~~~~ 115 (352)
T 2ism_A 111 RHLGE 115 (352)
T ss_dssp EECSS
T ss_pred EeCCC
Confidence 87643
No 337
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=86.69 E-value=3.8 Score=40.91 Aligned_cols=117 Identities=11% Similarity=0.058 Sum_probs=71.8
Q ss_pred CCcEEEEeCCCCeEEEEEeCCCeeEEEEcCCCEEEEEcCCcEEEEEcCCCceeeeeCCCCCEEEEEEeCC-EEEEEcCCC
Q 021744 171 DETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND-LLFAGTQDG 249 (308)
Q Consensus 171 dg~v~~wd~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~-~l~~g~~dg 249 (308)
..+|.|.|+.++..+...........+.|..+.++.=...++.+||+.+.+.+.-.....+|.-=.|-.+ .|+..+. .
T Consensus 47 ~~~vvIidl~~~~~~~rrpi~AdsAIMnP~~~iiALrag~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~lVT~-~ 125 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTD-N 125 (1630)
T ss_pred CceEEEEECCCCCCcccccccchhhccCCCcceEEEecCCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEEEcC-C
Confidence 3478888888766543333333333345667777765677999999998877632222345555555444 5554443 4
Q ss_pred eEEEEEcCCCCcccccceeccccC----CCeEE-EEecCCCeEEEee
Q 021744 250 AILAWKFNVTTNCFEPAASLKVHT----DSNRA-HFSRDVTSLLGSV 291 (308)
Q Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~~----~~v~~-~~s~d~~~l~~s~ 291 (308)
.|+-|++.... .|++.+..|. ..|-. .-+++.+|++..+
T Consensus 126 aVyHW~~~~~s---~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~g 169 (1630)
T 1xi4_A 126 AVYHWSMEGES---QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTG 169 (1630)
T ss_pred eEEEeccCCCC---ccHHHHhcchhcccCeeEEeeeCCCCCeEEEEe
Confidence 89999997532 5666665553 34444 7788999987443
No 338
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=81.04 E-value=34 Score=31.45 Aligned_cols=184 Identities=10% Similarity=-0.007 Sum_probs=94.0
Q ss_pred cCCCe-eeccCC----CcEEEEECCCCCCcccc-c-----ceeeeeeeeeeeec-CCce-EEeeCC------CeEEEEEc
Q 021744 76 NNTWG-RNNNFN----NHSNNYRAGNSKNSNIN-N-----RAVIKTDILCRNWV-QGNC-MYGEKC------KFLHSWTV 136 (308)
Q Consensus 76 ~~g~~-~s~~~d----~~i~vwd~~~~~~~~~~-~-----~~~~~~~~~~~~~~-~~~~-~~g~~d------~~i~iwd~ 136 (308)
.++.. +.|+.+ ..+.+||..+.+..... . ......-..+.... ++.+ +.|+.+ ..+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 55566 777753 45788888766432211 0 01111112223332 4444 777643 35788998
Q ss_pred CCCc-eeeeEeeCcccceEEEEEeCCCCEEEEeeCCC--cEEEEeCCCCeEEEEEe---C---CCeeE-EEE-cC-CCEE
Q 021744 137 GDGF-KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDE--TVRVWDCASGQCAGVIN---L---GGEVG-CMI-SE-GPWI 204 (308)
Q Consensus 137 ~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg--~v~~wd~~~~~~~~~~~---~---~~~v~-~~~-~~-~~~l 204 (308)
.+.. +.+..+...... .+++...++..++.|+.++ .+.+||..+.+-...-. . ..... ++. .+ ++++
T Consensus 476 ~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 8752 111112111111 2233323677888887655 68999998875332211 0 11112 222 23 5566
Q ss_pred EEEc---C-----CcEEEEEcCCCc------eeeeeC----CCCCEEEEEEeCC-EEEEEcC--------CCeEEEEEcC
Q 021744 205 FIGV---T-----NFVKAWNTQTNT------DLSLSG----PVGQVYAMAVGND-LLFAGTQ--------DGAILAWKFN 257 (308)
Q Consensus 205 ~~~~---d-----~~i~~wd~~~~~------~~~~~~----~~~~v~~~~~~~~-~l~~g~~--------dg~i~iwd~~ 257 (308)
+.|+ + +.+.+||+.+.+ ...+.. .......+.+..+ +++.|+. ...|.+||+.
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 6654 2 358899999887 222211 1122333444425 6666664 3468999998
Q ss_pred CCC
Q 021744 258 VTT 260 (308)
Q Consensus 258 ~~~ 260 (308)
+..
T Consensus 635 t~~ 637 (695)
T 2zwa_A 635 SET 637 (695)
T ss_dssp TTE
T ss_pred CCe
Confidence 764
No 339
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=79.04 E-value=26 Score=29.00 Aligned_cols=71 Identities=14% Similarity=0.057 Sum_probs=45.2
Q ss_pred eeeeeeecCCceEEeeCCCeEEEEEcCCCceeeeEee---CcccceEEEEEeCC---CCEEEEeeC----C----CcEEE
Q 021744 111 DILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLE---GHQKVVSGITLPSG---SDKLYSGSK----D----ETVRV 176 (308)
Q Consensus 111 ~~~~~~~~~~~~~~g~~d~~i~iwd~~~~~~~~~~~~---~h~~~v~~~~~~~~---~~~l~s~s~----d----g~v~~ 176 (308)
...+.+.+++.++.+..++.|++++. ++.+.+..+. ........++++|+ +..|+.+.. + ..|..
T Consensus 31 P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r 109 (354)
T 3a9g_A 31 PWSIAPLGGGRYLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIR 109 (354)
T ss_dssp EEEEEEEETTEEEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEE
T ss_pred CeEEEEcCCCeEEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEE
Confidence 56678889998877777799999973 4422222221 22356789999997 445544332 3 56777
Q ss_pred EeCCCC
Q 021744 177 WDCASG 182 (308)
Q Consensus 177 wd~~~~ 182 (308)
|+....
T Consensus 110 ~~~~~~ 115 (354)
T 3a9g_A 110 GRLDGS 115 (354)
T ss_dssp EEECSS
T ss_pred EEECCC
Confidence 776643
No 340
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=78.30 E-value=4.7 Score=38.68 Aligned_cols=38 Identities=24% Similarity=0.301 Sum_probs=33.7
Q ss_pred ceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe
Q 021744 152 VVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN 189 (308)
Q Consensus 152 ~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~ 189 (308)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56777778888899999999999999999999998875
No 341
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=76.36 E-value=15 Score=32.91 Aligned_cols=100 Identities=8% Similarity=-0.078 Sum_probs=61.9
Q ss_pred eeEEecCCCe--eeccCCCcEEEEECCCCC------Ccccc-----cceeeeeeeeeeeecCCce-EEeeCCCeEEEEEc
Q 021744 71 AKRFANNTWG--RNNNFNNHSNNYRAGNSK------NSNIN-----NRAVIKTDILCRNWVQGNC-MYGEKCKFLHSWTV 136 (308)
Q Consensus 71 ~i~~s~~g~~--~s~~~d~~i~vwd~~~~~------~~~~~-----~~~~~~~~~~~~~~~~~~~-~~g~~d~~i~iwd~ 136 (308)
.+.++|||++ ++|--+.++.|+|++.-+ .+.-. .........-..|.++|.. .+---|..|..|++
T Consensus 327 Gv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni 406 (638)
T 3sbq_A 327 GCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWNM 406 (638)
T ss_dssp CEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEH
T ss_pred ceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEEec
Confidence 5899999999 778889999999996321 10000 0011122566788888866 44457999999998
Q ss_pred CCC---------ceeeeEeeCcccceEEEE-----EeCCCCEEEEeeC
Q 021744 137 GDG---------FKLLTQLEGHQKVVSGIT-----LPSGSDKLYSGSK 170 (308)
Q Consensus 137 ~~~---------~~~~~~~~~h~~~v~~~~-----~~~~~~~l~s~s~ 170 (308)
... ...+..+.-|-.+-.-.+ -.++|++|++...
T Consensus 407 ~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 407 EEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp HHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred cHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence 642 134445544433222221 2568888888743
No 342
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=75.39 E-value=26 Score=31.41 Aligned_cols=98 Identities=14% Similarity=0.127 Sum_probs=64.3
Q ss_pred eeeeeeeeecCCce--EEeeCCCeEEEEEcCCCc-----ee-------eeEeeCcccceEEEEEeCCCCEEEEeeCCCcE
Q 021744 109 KTDILCRNWVQGNC--MYGEKCKFLHSWTVGDGF-----KL-------LTQLEGHQKVVSGITLPSGSDKLYSGSKDETV 174 (308)
Q Consensus 109 ~~~~~~~~~~~~~~--~~g~~d~~i~iwd~~~~~-----~~-------~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~v 174 (308)
+....+..+|+|.+ +.|-.+.++.++|++... ++ ..+.+. .-.....+|+++|....|..-|..|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-GlGPlHt~Fd~~G~aYTtlfidSqv 401 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-GLGPLHTTFDGRGNAYTTLFIDSQV 401 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-CSCEEEEEECSSSEEEEEETTTTEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-CCcccEEEECCCCceEeeeeecceE
Confidence 34667889999977 556678999999987421 11 122221 2345788999999555677789999
Q ss_pred EEEeCCCC----------eEEEEEeCCCeeEEE--------EcCCCEEEEE
Q 021744 175 RVWDCASG----------QCAGVINLGGEVGCM--------ISEGPWIFIG 207 (308)
Q Consensus 175 ~~wd~~~~----------~~~~~~~~~~~v~~~--------~~~~~~l~~~ 207 (308)
..|++... ..+..+.......-. -++|++|++.
T Consensus 402 vkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~l 452 (638)
T 3sbq_A 402 VKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVAL 452 (638)
T ss_dssp EEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEE
T ss_pred EEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEe
Confidence 99998752 345555533333322 2578888875
No 343
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=73.88 E-value=43 Score=28.88 Aligned_cols=35 Identities=6% Similarity=-0.012 Sum_probs=25.3
Q ss_pred ccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeE
Q 021744 150 QKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQC 184 (308)
Q Consensus 150 ~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~ 184 (308)
-...+.|+|.|+++++++-...+.|++++..+++.
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~ 60 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSV 60 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcE
Confidence 34567999999998777654445788888765554
No 344
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=73.72 E-value=37 Score=28.07 Aligned_cols=218 Identities=8% Similarity=-0.076 Sum_probs=106.9
Q ss_pred eeEEecCCCeeeccCCCcEEEEECCCCC-Cccc-ccce-eeeeeeeeeeecC----Cce-EEeeC---C----CeEEEEE
Q 021744 71 AKRFANNTWGRNNNFNNHSNNYRAGNSK-NSNI-NNRA-VIKTDILCRNWVQ----GNC-MYGEK---C----KFLHSWT 135 (308)
Q Consensus 71 ~i~~s~~g~~~s~~~d~~i~vwd~~~~~-~~~~-~~~~-~~~~~~~~~~~~~----~~~-~~g~~---d----~~i~iwd 135 (308)
.++|.|+|.++.+..++.|++++. .++ .+.. .... .......+++.|+ +.+ ++-.. + ..|..|+
T Consensus 33 ~ia~~pdG~l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~ 111 (354)
T 3a9g_A 33 SIAPLGGGRYLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGR 111 (354)
T ss_dssp EEEEEETTEEEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEE
T ss_pred EEEEcCCCeEEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEE
Confidence 799999998844455688988873 333 1100 0000 0123566788886 444 33221 3 5677777
Q ss_pred cCCC------cee-eeEeeCc-ccceEEEEEeCCCCEEEEeeC-------------CCcEEEEeCCCC---------eEE
Q 021744 136 VGDG------FKL-LTQLEGH-QKVVSGITLPSGSDKLYSGSK-------------DETVRVWDCASG---------QCA 185 (308)
Q Consensus 136 ~~~~------~~~-~~~~~~h-~~~v~~~~~~~~~~~l~s~s~-------------dg~v~~wd~~~~---------~~~ 185 (308)
.... .+. +..+... ......++|.|++.+.++.+. .|.|.-++.... ..+
T Consensus 112 ~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i 191 (354)
T 3a9g_A 112 LDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPI 191 (354)
T ss_dssp ECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCE
T ss_pred ECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcE
Confidence 6543 111 1222211 112357999999987666442 245555554421 122
Q ss_pred EEEeCCCeeEE-EEc-CCCEEEEEc--CC--cEEEEEcCC--------C--------cee-eeeCCCCCEEEEEEe----
Q 021744 186 GVINLGGEVGC-MIS-EGPWIFIGV--TN--FVKAWNTQT--------N--------TDL-SLSGPVGQVYAMAVG---- 238 (308)
Q Consensus 186 ~~~~~~~~v~~-~~~-~~~~l~~~~--d~--~i~~wd~~~--------~--------~~~-~~~~~~~~v~~~~~~---- 238 (308)
...-+..+... +.+ +++++++-. +. .|.+..... + .+. .+.........++|.
T Consensus 192 ~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~ 271 (354)
T 3a9g_A 192 WSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDM 271 (354)
T ss_dssp EEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSS
T ss_pred EEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCC
Confidence 22223333332 335 455555422 22 243332110 0 011 121123357788883
Q ss_pred ---CC--EEEEEcCCCeEEEEEcCCCCcccccceec-cccCCCeEE-EEecCCCeEEEe
Q 021744 239 ---ND--LLFAGTQDGAILAWKFNVTTNCFEPAASL-KVHTDSNRA-HFSRDVTSLLGS 290 (308)
Q Consensus 239 ---~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~v~~-~~s~d~~~l~~s 290 (308)
.+ ++++.-..+.|...++..... ......+ ......+.. ++.|||.+.++.
T Consensus 272 fp~~~G~l~v~~~~~~~v~~~~~~~~g~-~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~ 329 (354)
T 3a9g_A 272 FPGLRGWLLIACLRGSMLAAVNFGDNME-VRKISTFFKNVFGRLRDVVIDDDGGILIST 329 (354)
T ss_dssp CGGGTTEEEEEETTTTEEEEEEECGGGC-EEEEEEECTTTSCCEEEEEECTTSCEEEEE
T ss_pred CcccCCcEEEEEcCCCEEEEEEECCCCc-ccceeeeccCCCCCeeEEEECCCCcEEEEE
Confidence 22 556666677888888875311 0111222 222344556 999999766654
No 345
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=70.58 E-value=4.9 Score=39.44 Aligned_cols=38 Identities=24% Similarity=0.301 Sum_probs=32.5
Q ss_pred ceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEe
Q 021744 152 VVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN 189 (308)
Q Consensus 152 ~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~ 189 (308)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44556667788899999999999999999999998876
No 346
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=68.49 E-value=10 Score=34.84 Aligned_cols=36 Identities=14% Similarity=0.176 Sum_probs=29.7
Q ss_pred eEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEEEeC
Q 021744 153 VSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINL 190 (308)
Q Consensus 153 v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~ 190 (308)
|.++.+ +..++++-+.|.++|+|++++++++.+...
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 444444 467999999999999999999999988773
No 347
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=67.63 E-value=47 Score=26.78 Aligned_cols=173 Identities=14% Similarity=0.065 Sum_probs=95.1
Q ss_pred eEEecCCCe--eeccCC-------------CcEEEEECCCCCCcccccceeeeeeeeeeeecCCce-EEee----CCCeE
Q 021744 72 KRFANNTWG--RNNNFN-------------NHSNNYRAGNSKNSNINNRAVIKTDILCRNWVQGNC-MYGE----KCKFL 131 (308)
Q Consensus 72 i~~s~~g~~--~s~~~d-------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~----~d~~i 131 (308)
--++++|.. .+...+ ..|+..+++..+... +. . .....+++++.. +... ....|
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~--l~--~--~~~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV--LD--P--DPCIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE--EE--C--SCEEEEEEETTEEEEEEESSSSCEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE--ee--c--CCccEEEEeCCEEEEEeecCCCCceE
Confidence 355788877 343332 457777776553221 11 1 111245666654 3332 34456
Q ss_pred EEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeC-CCcEEEEeCCCCeEEEEEeCCCeeEEEEcCCCEEEEEc--
Q 021744 132 HSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSK-DETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGV-- 208 (308)
Q Consensus 132 ~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-dg~v~~wd~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-- 208 (308)
+.-++... ....+..+.. .+++++++.|+-.+. ...|..-++..+.....+.. .....++|++.+|+-..
T Consensus 132 y~~~~dGs--~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~-~~~~~~~P~g~~iy~t~~~ 204 (302)
T 3s25_A 132 YRIRIDGE--EKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC-NCYKPVVLDDTNVYYMDVN 204 (302)
T ss_dssp EEEETTSC--CCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS-CEEEEEEEETTEEEEEEGG
T ss_pred EEEECCCC--CeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC-CccceeeecCCEEEEEEcC
Confidence 56666543 2334443432 456777888765554 67888888887665544432 22234567888887443
Q ss_pred C-CcEEEEEcCCCceeeeeCCCCCEEEEEEeCCEEEEE--cCCCeEEEEEcCCC
Q 021744 209 T-NFVKAWNTQTNTDLSLSGPVGQVYAMAVGNDLLFAG--TQDGAILAWKFNVT 259 (308)
Q Consensus 209 d-~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~~l~~g--~~dg~i~iwd~~~~ 259 (308)
+ ..|..-++.......+.. ..+..++...+.|..+ ...+.|...++...
T Consensus 205 ~~~~I~~~~ldG~~~~~Lt~--~~~~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 205 RDNAIVHVNINNPNPVVLTE--ANIEHYNVYGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp GTTEEEEECSSSCCCEECSC--SCEEEEEEETTEEEEEECSSSCEEEEEETTSC
T ss_pred CCcEEEEEECCCCCeEEEeC--CCcceEEECCCEEEEEECCCCcEEEEEECCCC
Confidence 3 367777887776555542 2344555555544433 33467777777754
No 348
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=67.42 E-value=78 Score=29.21 Aligned_cols=214 Identities=9% Similarity=-0.011 Sum_probs=106.3
Q ss_pred eeE-EecCCCe--ee---ccCC-CcEEEEECCCCCCcccccceee-e------eeeeeeeecCCceEEe-----------
Q 021744 71 AKR-FANNTWG--RN---NNFN-NHSNNYRAGNSKNSNINNRAVI-K------TDILCRNWVQGNCMYG----------- 125 (308)
Q Consensus 71 ~i~-~s~~g~~--~s---~~~d-~~i~vwd~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~g----------- 125 (308)
.+. ++|++++ ++ |+.| .+++++|+++++.+........ . ....+.|...+....+
T Consensus 133 g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~ 212 (711)
T 4hvt_A 133 GVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSS 212 (711)
T ss_dssp EEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTT
T ss_pred ceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcC
Confidence 344 8899987 33 2333 4689999998876533222100 0 0012233322322221
Q ss_pred eCCCeEEEEEcCCCc-eeeeEeeCcccce-EEEEEeCCCC-----EEEEeeCC---CcEEEEeCCC--CeEEEEEeCCCe
Q 021744 126 EKCKFLHSWTVGDGF-KLLTQLEGHQKVV-SGITLPSGSD-----KLYSGSKD---ETVRVWDCAS--GQCAGVINLGGE 193 (308)
Q Consensus 126 ~~d~~i~iwd~~~~~-~~~~~~~~h~~~v-~~~~~~~~~~-----~l~s~s~d---g~v~~wd~~~--~~~~~~~~~~~~ 193 (308)
+.-..|+.|.+.+.. +-...+.+....+ .....++++. .+++.+.+ ..+.+.+... ++ +..+..+..
T Consensus 213 ~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~ 291 (711)
T 4hvt_A 213 LYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINMPSD 291 (711)
T ss_dssp SSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCSCTT
T ss_pred CCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeecCCc
Confidence 223578888887652 1222344333333 2344556665 24554423 3455656553 33 223332222
Q ss_pred eEE-EEcCCCEEEEE-----------cCCcEEEEEcCCCc--------eeeee--CCCCCEEEEEEeCC-EEEEEcCCCe
Q 021744 194 VGC-MISEGPWIFIG-----------VTNFVKAWNTQTNT--------DLSLS--GPVGQVYAMAVGND-LLFAGTQDGA 250 (308)
Q Consensus 194 v~~-~~~~~~~l~~~-----------~d~~i~~wd~~~~~--------~~~~~--~~~~~v~~~~~~~~-~l~~g~~dg~ 250 (308)
... ....+.+++.. ..+.|...|+.+.. ...+. .....+..+.+.++ ++++...++.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~ 371 (711)
T 4hvt_A 292 ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDRVFLATYDNVV 371 (711)
T ss_dssp CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSCEEEEEEETTE
T ss_pred ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCEEEEEEEECCE
Confidence 221 23445554422 25578889987632 12222 22346778999988 7777777775
Q ss_pred --EEEEEcCCCCccccccee-cccc-CCCeEE-EEecCCCeEE
Q 021744 251 --ILAWKFNVTTNCFEPAAS-LKVH-TDSNRA-HFSRDVTSLL 288 (308)
Q Consensus 251 --i~iwd~~~~~~~~~~~~~-~~~~-~~~v~~-~~s~d~~~l~ 288 (308)
+.++++.++.. .+.. +... ...+.. ..++++..++
T Consensus 372 ~~l~~~~~~~g~~---~~~~~i~lp~~~~~~~~~~~~~~~~~~ 411 (711)
T 4hvt_A 372 AKVVTFTLENEQW---TKPVVLKLPYQNAIFGMSSYEEEEEAL 411 (711)
T ss_dssp EEEEEECEETTEE---CCCEEECCCSTTCEEEEECCTTCSCEE
T ss_pred EEEEEEECCCCce---EEEeccCCCCCeEEEEEeecCcCCEEE
Confidence 56666655410 1222 2211 234555 5667765554
No 349
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=64.21 E-value=60 Score=26.74 Aligned_cols=71 Identities=14% Similarity=0.172 Sum_probs=43.2
Q ss_pred eeeeeeecCCc-eEEeeCCCeEEEEEcCCCc-eeeeEe----eCcccceEEEEEeCC---CCEEEEe-eC-------CCc
Q 021744 111 DILCRNWVQGN-CMYGEKCKFLHSWTVGDGF-KLLTQL----EGHQKVVSGITLPSG---SDKLYSG-SK-------DET 173 (308)
Q Consensus 111 ~~~~~~~~~~~-~~~g~~d~~i~iwd~~~~~-~~~~~~----~~h~~~v~~~~~~~~---~~~l~s~-s~-------dg~ 173 (308)
...+.+.+++. ++.+...+.|++++..... +.+..+ .........++++|+ +..|... +. ...
T Consensus 20 P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~ 99 (353)
T 2g8s_A 20 PWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTA 99 (353)
T ss_dssp EEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEE
T ss_pred cEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeE
Confidence 67788999998 7777778999999854221 111111 122346689999996 4444433 22 235
Q ss_pred EEEEeCCC
Q 021744 174 VRVWDCAS 181 (308)
Q Consensus 174 v~~wd~~~ 181 (308)
|..+++..
T Consensus 100 v~r~~~~~ 107 (353)
T 2g8s_A 100 VGYGRLSD 107 (353)
T ss_dssp EEEEEECT
T ss_pred EEEEEECC
Confidence 66666653
No 350
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=57.71 E-value=73 Score=25.63 Aligned_cols=145 Identities=6% Similarity=0.045 Sum_probs=77.4
Q ss_pred CCeEEEEEcCCCceeeeEeeCcccceEEEEEeCCCCEEEEeeCC--------------CcEEEEeCCCCeEEEEEeCCCe
Q 021744 128 CKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKD--------------ETVRVWDCASGQCAGVINLGGE 193 (308)
Q Consensus 128 d~~i~iwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d--------------g~v~~wd~~~~~~~~~~~~~~~ 193 (308)
++.|+..+.... . ...+.. .. +--+++++.+|+-+... ..|+..++..++...... ..
T Consensus 36 ~~~ly~~~~dg~-~-~~~l~~--~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~--~~ 107 (302)
T 3s25_A 36 NGRLYAMNIDGS-N-IHKLSN--DT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDP--DP 107 (302)
T ss_dssp TTEEEEEETTSC-S-CEEEEE--EE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEEC--SC
T ss_pred CceEEEEcCCCC-C-CEEccC--Cc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeec--CC
Confidence 456666665443 2 233322 22 23457788888766543 357777777665333222 22
Q ss_pred eEEEEcCCCEEEEEc-----CCcEEEEEcCCCceeeeeCCCCCEEEEEEeCC-EEEEEcCCCeEEEEEcCCCCcccccce
Q 021744 194 VGCMISEGPWIFIGV-----TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAA 267 (308)
Q Consensus 194 v~~~~~~~~~l~~~~-----d~~i~~wd~~~~~~~~~~~~~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~ 267 (308)
...+.++++.|+-.. ...|...++...+...+..+.. ..+.+... +..+......|...++..+.. +.+
T Consensus 108 ~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~--~~l- 182 (302)
T 3s25_A 108 CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL--FTCNTSDRYFYYNNPKNGQLYRYDTASQSE--ALF- 182 (302)
T ss_dssp EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC--CCSEEETTEEEEECTTTCCEEEEETTTTEE--EEE-
T ss_pred ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc--eEeeEECCEEEEEeCCCceEEEEECCCCCE--EEE-
Confidence 335667777777432 3467777877655555554433 22333334 444544467888888876521 211
Q ss_pred eccccCCCeEEEEecCCCeEEE
Q 021744 268 SLKVHTDSNRAHFSRDVTSLLG 289 (308)
Q Consensus 268 ~~~~~~~~v~~~~s~d~~~l~~ 289 (308)
+. ......+.|++.+|+-
T Consensus 183 -~~---~~~~~~~~P~g~~iy~ 200 (302)
T 3s25_A 183 -YD---CNCYKPVVLDDTNVYY 200 (302)
T ss_dssp -EC---SCEEEEEEEETTEEEE
T ss_pred -eC---CCccceeeecCCEEEE
Confidence 22 2222345578877763
No 351
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=50.03 E-value=1.1e+02 Score=25.32 Aligned_cols=220 Identities=6% Similarity=-0.088 Sum_probs=108.4
Q ss_pred eeEEecCCCe-eeccCCCcEEEEECCCCCCcccc----c-ceeeeeeeeeeeecC----Cce-EE--eeCCCeEEEEEcC
Q 021744 71 AKRFANNTWG-RNNNFNNHSNNYRAGNSKNSNIN----N-RAVIKTDILCRNWVQ----GNC-MY--GEKCKFLHSWTVG 137 (308)
Q Consensus 71 ~i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~----~-~~~~~~~~~~~~~~~----~~~-~~--g~~d~~i~iwd~~ 137 (308)
.|+|.|+|.. ++--..+.|++++.+.++..... . ..-......+++.|+ +.+ ++ ...++.|.-|...
T Consensus 36 ~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~ 115 (347)
T 3das_A 36 GLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYD 115 (347)
T ss_dssp EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBC
T ss_pred EEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeC
Confidence 7999999998 66555898988876544321100 0 011122566778774 433 22 2244566666554
Q ss_pred CC----------ceeeeEeeC-cccceEEEEEeCCCCEEEEeeC-------------CCcEEEEeCCCC---------eE
Q 021744 138 DG----------FKLLTQLEG-HQKVVSGITLPSGSDKLYSGSK-------------DETVRVWDCASG---------QC 184 (308)
Q Consensus 138 ~~----------~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~-------------dg~v~~wd~~~~---------~~ 184 (308)
.. +.++..+.. ....-..|+|.||+.+.++.+. .|.|.-.+.... ..
T Consensus 116 ~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~ 195 (347)
T 3das_A 116 EKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSP 195 (347)
T ss_dssp TTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCC
T ss_pred CCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCe
Confidence 31 011222221 1112357999999987777542 244444454321 11
Q ss_pred EEEEeCCCeeEE-EEcCCCEEEEE--cCCcEEEEEcCCCce------------------e-eeeCCCCCEEEEEEeCC-E
Q 021744 185 AGVINLGGEVGC-MISEGPWIFIG--VTNFVKAWNTQTNTD------------------L-SLSGPVGQVYAMAVGND-L 241 (308)
Q Consensus 185 ~~~~~~~~~v~~-~~~~~~~l~~~--~d~~i~~wd~~~~~~------------------~-~~~~~~~~v~~~~~~~~-~ 241 (308)
+...-+..+... +.+++++.++- .++-=.|--+..+.. + .+..+......|+|... .
T Consensus 196 i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~~g~~ 275 (347)
T 3das_A 196 VYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYAEGSV 275 (347)
T ss_dssp EEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEETTEE
T ss_pred EEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEEcCce
Confidence 222223333332 23556555542 233112221222211 1 11112235678888877 5
Q ss_pred EEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEe
Q 021744 242 LFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGS 290 (308)
Q Consensus 242 l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s 290 (308)
+...-..+.|....+.......+....+.+....+.. +..|||.++++.
T Consensus 276 ~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~t 325 (347)
T 3das_A 276 WMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVT 325 (347)
T ss_dssp EEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEE
T ss_pred eeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEE
Confidence 5555556677666766542100112223333456777 889999766543
No 352
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=49.02 E-value=25 Score=33.73 Aligned_cols=30 Identities=10% Similarity=0.102 Sum_probs=25.4
Q ss_pred CCEEEEEEeCC--EEEEEcCCCeEEEEEcCCC
Q 021744 230 GQVYAMAVGND--LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 230 ~~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~ 259 (308)
..+.+++..++ ++++-+.|+++|+|++.++
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~ 267 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTN 267 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTT
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCC
Confidence 35677777777 8899999999999999886
No 353
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=44.94 E-value=1.3e+02 Score=24.81 Aligned_cols=141 Identities=15% Similarity=0.152 Sum_probs=73.5
Q ss_pred cccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCCeEEEE--Ee-----CCCeeEEE--EcC---CCEEEEE----cCCcE
Q 021744 149 HQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGV--IN-----LGGEVGCM--ISE---GPWIFIG----VTNFV 212 (308)
Q Consensus 149 h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~--~~-----~~~~v~~~--~~~---~~~l~~~----~d~~i 212 (308)
.-...+.|+|.|++.++++--..|.|++++...++.... +. ...-...+ .|+ +..|.+. .++.|
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 345678999999998777765589999998766554222 11 11222223 342 3444432 24566
Q ss_pred EEEEcCCC----------cee--eee-CCCCCEEEEEEeCC--EEEE-Ec------------CCCeEEEEEcCCCCcccc
Q 021744 213 KAWNTQTN----------TDL--SLS-GPVGQVYAMAVGND--LLFA-GT------------QDGAILAWKFNVTTNCFE 264 (308)
Q Consensus 213 ~~wd~~~~----------~~~--~~~-~~~~~v~~~~~~~~--~l~~-g~------------~dg~i~iwd~~~~~~~~~ 264 (308)
.-|.+..+ +.+ .+. ........|.|.|| ++++ |. ..|.|.-.+....-....
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~n 189 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGN 189 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTC
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCC
Confidence 66666541 111 121 11113456999999 3333 32 134554445432100000
Q ss_pred c---cee-ccccCCCeEEEEecCCCeEEE
Q 021744 265 P---AAS-LKVHTDSNRAHFSRDVTSLLG 289 (308)
Q Consensus 265 ~---~~~-~~~~~~~v~~~~s~d~~~l~~ 289 (308)
+ ... -.+|.++.-.+|.|+|.+.++
T Consensus 190 Pf~~~~i~a~G~RNp~Gla~dp~G~L~~~ 218 (347)
T 3das_A 190 PFPGSPVYSYGHRNVQGLAWDDKQRLFAS 218 (347)
T ss_dssp SSTTCCEEEBCCSBCCEEEECTTCCEEEE
T ss_pred CCCCCeEEeeCCCCcceEEECCCCCEEEE
Confidence 0 011 126667777799998876554
No 354
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=38.60 E-value=40 Score=31.08 Aligned_cols=28 Identities=14% Similarity=0.249 Sum_probs=22.2
Q ss_pred CEEEEEEeCC-EEEEEcCCCeEEEEEcCCC
Q 021744 231 QVYAMAVGND-LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 231 ~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~ 259 (308)
.|.++.+ ++ ++++-+.|.++|+|++.++
T Consensus 223 ~Is~~~~-~~~fLftL~~Dh~LRiWsL~t~ 251 (729)
T 3f7f_A 223 VISCKLF-HERYLIVLTQNCHLKIWDLTSF 251 (729)
T ss_dssp EEEEEEE-TTTEEEEEETTCEEEEEETTTT
T ss_pred eEEEecc-CCcEEEEEEcCCeEEEEEcCCC
Confidence 3454444 45 9999999999999999987
No 355
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=36.83 E-value=1.7e+02 Score=23.88 Aligned_cols=68 Identities=18% Similarity=0.049 Sum_probs=38.9
Q ss_pred CCEEEEEEeC--------C-EEEEEcCCCeEEEEEcCCCCcccccceeccccCCCeEE-EEecCCCeEEEee--ceEEEE
Q 021744 230 GQVYAMAVGN--------D-LLFAGTQDGAILAWKFNVTTNCFEPAASLKVHTDSNRA-HFSRDVTSLLGSV--SFIMFI 297 (308)
Q Consensus 230 ~~v~~~~~~~--------~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~s~d~~~l~~s~--s~~i~~ 297 (308)
..+..+.|.. . ++++.-..+.|...++..++. ......+......+.. ++.|||.+.+++- +..||.
T Consensus 271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~I~r 349 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKV-TEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGELLK 349 (353)
T ss_dssp CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEE-EEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEEEEE
T ss_pred cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeE-eeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCEEEE
Confidence 3567788853 2 666666778888888875421 0111112222335556 9999998766542 455554
Q ss_pred e
Q 021744 298 G 298 (308)
Q Consensus 298 ~ 298 (308)
.
T Consensus 350 i 350 (353)
T 2g8s_A 350 V 350 (353)
T ss_dssp E
T ss_pred E
Confidence 3
No 356
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=32.66 E-value=30 Score=33.94 Aligned_cols=29 Identities=10% Similarity=0.101 Sum_probs=22.8
Q ss_pred CEEEEEEeCC--EEEEEcCCCeEEEEEcCCC
Q 021744 231 QVYAMAVGND--LLFAGTQDGAILAWKFNVT 259 (308)
Q Consensus 231 ~v~~~~~~~~--~l~~g~~dg~i~iwd~~~~ 259 (308)
.+.+++..++ ++++-+.|+++|+|++.++
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~ 269 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTN 269 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTT
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCC
Confidence 3445555565 8889999999999999886
No 357
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=29.75 E-value=2.4e+02 Score=23.36 Aligned_cols=187 Identities=16% Similarity=0.121 Sum_probs=96.0
Q ss_pred eEEecCCCe-eeccCCCcEEEEECCCCCCcccccce-eeee--------eeeeeeecCCce-EEeeCCCeEEEEEcCCCc
Q 021744 72 KRFANNTWG-RNNNFNNHSNNYRAGNSKNSNINNRA-VIKT--------DILCRNWVQGNC-MYGEKCKFLHSWTVGDGF 140 (308)
Q Consensus 72 i~~s~~g~~-~s~~~d~~i~vwd~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~-~~g~~d~~i~iwd~~~~~ 140 (308)
++++.-..+ +.-..|+.|..|-.+..-++...... ...+ ............ +.-..+|.|+.|-....-
T Consensus 110 v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~G 189 (389)
T 3kci_A 110 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 189 (389)
T ss_dssp EEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCGGG
T ss_pred EEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCCCCC
Confidence 456666666 77778999999976432211111100 0000 011122222222 445678999999754310
Q ss_pred e----------eeeEeeC-cccceEEEEEeCCCCEEEEeeCCCcEEEEeCCCC-e---------EEE-EEe--CCCeeEE
Q 021744 141 K----------LLTQLEG-HQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG-Q---------CAG-VIN--LGGEVGC 196 (308)
Q Consensus 141 ~----------~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~dg~v~~wd~~~~-~---------~~~-~~~--~~~~v~~ 196 (308)
+ ....+.. ....|..++.-....+.+.-..||.|..|-.... + ... .+. ....+..
T Consensus 190 qLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~ 269 (389)
T 3kci_A 190 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK 269 (389)
T ss_dssp TTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEE
T ss_pred CcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEE
Confidence 0 0111111 1234556655433356666778999999964421 1 111 111 1223444
Q ss_pred EEc-CCCEEEEEcCCcEEEEEcCCC------------ceeeeeC-CCCCEEEEEEeCCEEEEEcCCCeEEEEEcCC
Q 021744 197 MIS-EGPWIFIGVTNFVKAWNTQTN------------TDLSLSG-PVGQVYAMAVGNDLLFAGTQDGAILAWKFNV 258 (308)
Q Consensus 197 ~~~-~~~~l~~~~d~~i~~wd~~~~------------~~~~~~~-~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~ 258 (308)
+.. ....++...++.|..|-.... .+..+.. ....|..++......+.-..||.|+.|=...
T Consensus 270 v~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 270 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp EEEETTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTCCEEEEECCT
T ss_pred EeCCCCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEeccCeEEEECCCCCEEEeeCCC
Confidence 433 344455667899999975421 0111221 1235777777666444457899999998764
No 358
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=28.26 E-value=2.4e+02 Score=25.27 Aligned_cols=57 Identities=14% Similarity=0.074 Sum_probs=34.9
Q ss_pred eeeeeeecCCceEEeeC-------------CCeEEEEEcCCCceeeeEeeCc-ccceEEEEEeCCCCEEEEe
Q 021744 111 DILCRNWVQGNCMYGEK-------------CKFLHSWTVGDGFKLLTQLEGH-QKVVSGITLPSGSDKLYSG 168 (308)
Q Consensus 111 ~~~~~~~~~~~~~~g~~-------------d~~i~iwd~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~ 168 (308)
...+.|.++|.+..+.. ...+..++..++ ++...+.+. ...++.++|+||++.|+..
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tG-el~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATG-EIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTC-CEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCC-eEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 44566777776633111 125666677666 444444432 3568999999999877654
No 359
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=25.37 E-value=3.2e+02 Score=23.35 Aligned_cols=58 Identities=12% Similarity=0.035 Sum_probs=36.8
Q ss_pred eeeeeeecCCceEEeeCCC-eEEEEEcCCCc-eeeeEeeC------cccceEEEEEeCC---CCEEEEe
Q 021744 111 DILCRNWVQGNCMYGEKCK-FLHSWTVGDGF-KLLTQLEG------HQKVVSGITLPSG---SDKLYSG 168 (308)
Q Consensus 111 ~~~~~~~~~~~~~~g~~d~-~i~iwd~~~~~-~~~~~~~~------h~~~v~~~~~~~~---~~~l~s~ 168 (308)
...+.|.++|.++.+...+ .|++++..++. ..+..+.. .......|+|+|+ +..|...
T Consensus 29 P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 29 PHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred ceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 5678889999886666665 68888765552 12222221 2456779999995 5555433
Done!