BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021750
(308 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224089064|ref|XP_002308620.1| predicted protein [Populus trichocarpa]
gi|222854596|gb|EEE92143.1| predicted protein [Populus trichocarpa]
Length = 311
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 242/315 (76%), Positives = 270/315 (85%), Gaps = 11/315 (3%)
Query: 1 MLFSQLPRLNFSIFVKPPLSLRSHFTLLPKHRLNFSA---LKSTLSTTEPIPISHA---V 54
M SQLP+ PP +H L +L LKSTL+TTEPIPI+ A +
Sbjct: 1 MALSQLPKFTHC----PPSLYNTHINLPLLTKLKLPTLTRLKSTLTTTEPIPITEAHNFL 56
Query: 55 EPEPEPHVAISLEKLFVPPETEVSIDDSS-LSTRILKGSNIVLSKYARDAQVAQAEFVKS 113
P+ E SL+KLF+PP+TEVSI+++S LS RILKGSNIVLSKYAR+AQV QAEF+KS
Sbjct: 57 TPQEETQTQFSLDKLFIPPDTEVSINENSGLSARILKGSNIVLSKYARNAQVVQAEFIKS 116
Query: 114 SVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSW 173
SVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSK PGKTQCINHF++NDSW
Sbjct: 117 SVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFKVNDSW 176
Query: 174 YLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLG 233
YLVDLPGYGYA+AP+ELRTDW+KFTKDYFLNRSTLVSVFLLIDASIPAK IDLEYASWLG
Sbjct: 177 YLVDLPGYGYASAPQELRTDWNKFTKDYFLNRSTLVSVFLLIDASIPAKKIDLEYASWLG 236
Query: 234 QNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDE 293
QNQ+PMT +FTKCDKRKKK+NGGKRPEEN+N+FQELI+GFF+TAPPWIMTS VTNQGRDE
Sbjct: 237 QNQVPMTFIFTKCDKRKKKRNGGKRPEENVNEFQELIRGFFETAPPWIMTSGVTNQGRDE 296
Query: 294 ILLHMAQLRNYWLKH 308
+LLHMAQLRNYWLKH
Sbjct: 297 MLLHMAQLRNYWLKH 311
>gi|224141797|ref|XP_002324249.1| predicted protein [Populus trichocarpa]
gi|222865683|gb|EEF02814.1| predicted protein [Populus trichocarpa]
Length = 316
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/316 (76%), Positives = 278/316 (87%), Gaps = 8/316 (2%)
Query: 1 MLFSQLPRLNFSIFVKPPLSLRSHFTL--LPKHRLN-FSALKSTLSTTEPIPISHA---V 54
M S+LP+L+FSIF P S +H L + K +L+ S LKST++TTEPIP + A +
Sbjct: 1 MALSRLPKLHFSIFTHPLPSPYTHINLPLITKLKLSTLSRLKSTVTTTEPIPFTEAHNLL 60
Query: 55 EPEPEPHVAISLEKLFVPPETEVSIDDSS--LSTRILKGSNIVLSKYARDAQVAQAEFVK 112
+ + SL+KLF+PP+TEVS++++S LS R+LKGSNIVLSKYARDAQ+ QAEF+K
Sbjct: 61 ALQEQTQTQFSLDKLFIPPDTEVSVNENSSGLSARVLKGSNIVLSKYARDAQIVQAEFIK 120
Query: 113 SSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDS 172
SSVRTEDCPSDGLPEFALVGRSNVGKSSLLNS+VRRKKLALTSK PGKTQCINHF++NDS
Sbjct: 121 SSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSIVRRKKLALTSKKPGKTQCINHFKVNDS 180
Query: 173 WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWL 232
WYLVDLPGYGYA+AP+ELRTDW+KFTKDYFLNRSTLVSVFLLIDASIPAK IDLEYASWL
Sbjct: 181 WYLVDLPGYGYASAPQELRTDWNKFTKDYFLNRSTLVSVFLLIDASIPAKKIDLEYASWL 240
Query: 233 GQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRD 292
GQNQ+PMTL+FTKCDKRKKKKNGGKRPEEN+N+FQELI+ FF+TAPPWIMTS VTNQGRD
Sbjct: 241 GQNQVPMTLIFTKCDKRKKKKNGGKRPEENVNEFQELIRDFFETAPPWIMTSGVTNQGRD 300
Query: 293 EILLHMAQLRNYWLKH 308
E+LLHMAQLRNYWLKH
Sbjct: 301 EMLLHMAQLRNYWLKH 316
>gi|255551060|ref|XP_002516578.1| GTP-binding protein engB, putative [Ricinus communis]
gi|223544398|gb|EEF45919.1| GTP-binding protein engB, putative [Ricinus communis]
Length = 317
Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust.
Identities = 246/317 (77%), Positives = 268/317 (84%), Gaps = 9/317 (2%)
Query: 1 MLFSQLPRLNFSIFVK----PPLSLRSHFTLLPKHRLNFSAL----KSTLSTTEPIPISH 52
M+ S L R ++ + P S + TL RLN + KSTLS EPIPISH
Sbjct: 1 MILSNLSRFHYLSIITHSKTPSPSPSALQTLTLFSRLNLPTIIKRPKSTLSPAEPIPISH 60
Query: 53 AVEPEPEPHVAISLEKLFVPPETEVSI-DDSSLSTRILKGSNIVLSKYARDAQVAQAEFV 111
E + +SL+KLFVPPETEV DD++LSTRILKGSNIVLSKYARDAQ+ QAEFV
Sbjct: 61 LSSQENNTQLPLSLDKLFVPPETEVLFTDDAALSTRILKGSNIVLSKYARDAQIGQAEFV 120
Query: 112 KSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRIND 171
KSSV TEDCP+DGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSK PGKTQCINHFR+ND
Sbjct: 121 KSSVSTEDCPNDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRVND 180
Query: 172 SWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASW 231
SWYLVDLPGYGYAAAP+ELRTDW+KFTKDYFLNRSTLVSVFLLIDASIPAK IDLEYASW
Sbjct: 181 SWYLVDLPGYGYAAAPQELRTDWNKFTKDYFLNRSTLVSVFLLIDASIPAKKIDLEYASW 240
Query: 232 LGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGR 291
LGQNQIPMTL+FTKCDKRKKKKNGGKRP+EN+NDFQELI+ FF+TAPPWIMTSS TNQGR
Sbjct: 241 LGQNQIPMTLIFTKCDKRKKKKNGGKRPDENVNDFQELIRSFFKTAPPWIMTSSTTNQGR 300
Query: 292 DEILLHMAQLRNYWLKH 308
DE+LLHMAQLRNYWLKH
Sbjct: 301 DEMLLHMAQLRNYWLKH 317
>gi|449509139|ref|XP_004163505.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding protein At2g22870-like
[Cucumis sativus]
Length = 315
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/322 (72%), Positives = 261/322 (81%), Gaps = 21/322 (6%)
Query: 1 MLFSQLPRLNFSIFVKPPLSLRSHFTLLPKHR--------------LNFSALKSTLSTTE 46
M+ S L R+N +F P + +F+L K F KSTL+ E
Sbjct: 1 MVLSHLSRINNFLFTSP---IHRNFSLFAKTNKPIIAATGAPILTSTPFPVPKSTLTAAE 57
Query: 47 PIPISHAVEPEPEPHVAISLEKLFVPPETEVSIDDSSLSTRILKGSNIVLSKYARDAQVA 106
PIPI+ E E + IS EKLFVPP+T++S RILKGSNIVL +YARDAQV+
Sbjct: 58 PIPITEFTEYPEETQLPISPEKLFVPPDTDIS---GGGXARILKGSNIVLGRYARDAQVS 114
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA+FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSK PGKTQCINH
Sbjct: 115 QADFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINH 174
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
FRINDSWYLVDLPGYGYAAAP+ELRTDW+KFT+DYFLNRSTLVSVFLLIDASIPAKPIDL
Sbjct: 175 FRINDSWYLVDLPGYGYAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDL 234
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSV 286
+YASWLGQNQIPMT++FTKCDKRKKK+ GKRPEEN++DFQELI GFFQT PPWIMTSSV
Sbjct: 235 DYASWLGQNQIPMTIIFTKCDKRKKKRM-GKRPEENVSDFQELISGFFQTTPPWIMTSSV 293
Query: 287 TNQGRDEILLHMAQLRNYWLKH 308
T+QGRDEILLH+AQLRNYWLKH
Sbjct: 294 THQGRDEILLHIAQLRNYWLKH 315
>gi|297811265|ref|XP_002873516.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297319353|gb|EFH49775.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 318
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/318 (75%), Positives = 272/318 (85%), Gaps = 10/318 (3%)
Query: 1 MLFSQLPRLNFSIFVKPPLSLRS-HFTLL-PK-----HRLNFS-ALKSTLSTTEPIPISH 52
M+ +QLPR + SI KP +L S HF L PK R FS KS L+T EPIP+S
Sbjct: 1 MILAQLPRFHLSILAKPSFALSSSHFNFLNPKPSVEVARTLFSFTSKSNLATVEPIPLSV 60
Query: 53 AVEPEPEPH-VAISLEKLFVPPETEVSIDDS-SLSTRILKGSNIVLSKYARDAQVAQAEF 110
+ + + V ISL+KLF+PPET++S +DS SL+ RILKGSNIVLSKYARDAQV QA++
Sbjct: 61 SDSSDLDDAPVEISLDKLFIPPETDISGEDSTSLTARILKGSNIVLSKYARDAQVVQADY 120
Query: 111 VKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRIN 170
VKSSV+TEDCP+DGLPEFALVGRSNVGKSSLLNSLVRRK+LALTSK PGKTQCINHFRIN
Sbjct: 121 VKSSVKTEDCPADGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRIN 180
Query: 171 DSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYAS 230
D WYLVDLPGYGYA+AP EL+ DW+KFTKDYFLNRSTLVSVFLL+DASIP K IDLEYAS
Sbjct: 181 DKWYLVDLPGYGYASAPHELKQDWNKFTKDYFLNRSTLVSVFLLVDASIPVKQIDLEYAS 240
Query: 231 WLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQG 290
WLGQNQ+PMTL+FTKCDKRKKKKNGGK+PEEN+ +FQ+LIQGFF+T PPWIMTSSVTNQG
Sbjct: 241 WLGQNQVPMTLIFTKCDKRKKKKNGGKKPEENIKEFQDLIQGFFETTPPWIMTSSVTNQG 300
Query: 291 RDEILLHMAQLRNYWLKH 308
RDEILLHMAQLRNYWLKH
Sbjct: 301 RDEILLHMAQLRNYWLKH 318
>gi|15239069|ref|NP_196709.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|7573405|emb|CAB87708.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|16648724|gb|AAL25554.1| AT5g11480/F15N18_70 [Arabidopsis thaliana]
gi|23505999|gb|AAN28859.1| At5g11480/F15N18_70 [Arabidopsis thaliana]
gi|332004301|gb|AED91684.1| putative GTP-binding protein [Arabidopsis thaliana]
Length = 318
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/319 (74%), Positives = 270/319 (84%), Gaps = 12/319 (3%)
Query: 1 MLFSQLPRLNFSIFVKPPLSLRSHFTLL--PKHRLNFS------ALKSTLSTTEPIP--I 50
M+ + LPR + SI KP SL S PK + S A KS L+T EPIP +
Sbjct: 1 MILAHLPRFHLSILAKPSFSLSSSHFSFLNPKPSVTVSRTLFSFASKSNLATVEPIPLSV 60
Query: 51 SHAVEPEPEPHVAISLEKLFVPPETEVSIDDS-SLSTRILKGSNIVLSKYARDAQVAQAE 109
S + + + P V I+L+KLF+PPET++S +DS SL+TRILKGSNIVLSKYARDAQV QA+
Sbjct: 61 SDSTDLDDAP-VEIALDKLFIPPETDISGEDSASLTTRILKGSNIVLSKYARDAQVVQAD 119
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
+VKSSV+TEDCP+DGLPEFALVGRSNVGKSSLLNSLVRRK+LALTSK PGKTQCINHFRI
Sbjct: 120 YVKSSVKTEDCPADGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRI 179
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
ND WYLVDLPGYGYA+AP EL+ DW+KFTKDYFLNRSTLVSVFLL+DASIP KPIDLEYA
Sbjct: 180 NDKWYLVDLPGYGYASAPHELKQDWNKFTKDYFLNRSTLVSVFLLVDASIPVKPIDLEYA 239
Query: 230 SWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQ 289
SWLGQNQ+PMTL+FTKCDKRKKKKNGGK+PE N+ +FQ+LIQGFF+T PPWIMTSSVTNQ
Sbjct: 240 SWLGQNQVPMTLIFTKCDKRKKKKNGGKKPEANIKEFQDLIQGFFETTPPWIMTSSVTNQ 299
Query: 290 GRDEILLHMAQLRNYWLKH 308
GRDEILLHMAQLRNYWLKH
Sbjct: 300 GRDEILLHMAQLRNYWLKH 318
>gi|449437038|ref|XP_004136299.1| PREDICTED: GTP-binding protein At2g22870-like [Cucumis sativus]
Length = 316
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/322 (73%), Positives = 263/322 (81%), Gaps = 20/322 (6%)
Query: 1 MLFSQLPRLNFSIFVKPPLSLRSHFTLLPKHR--------------LNFSALKSTLSTTE 46
M+ S L R+N +F P + +F+L K F KSTL+ E
Sbjct: 1 MVLSHLSRINNFLFTSP---IHRNFSLFAKTNKPIIAATGAPILTSTPFPVPKSTLTAAE 57
Query: 47 PIPISHAVEPEPEPHVAISLEKLFVPPETEVSIDDSSLSTRILKGSNIVLSKYARDAQVA 106
PIPI+ E E + IS EKLFVPP+T++S RILKGSNIVL +YARDAQV+
Sbjct: 58 PIPITEFTEYPEETQLPISPEKLFVPPDTDIS---GGGGARILKGSNIVLGRYARDAQVS 114
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA+FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSK PGKTQCINH
Sbjct: 115 QADFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINH 174
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
FRINDSWYLVDLPGYGYAAAP+ELRTDW+KFT+DYFLNRSTLVSVFLLIDASIPAKPIDL
Sbjct: 175 FRINDSWYLVDLPGYGYAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDL 234
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSV 286
+YASWLGQNQIPMT++FTKCDKRKKKKNGGKRPEEN++DFQELI GFFQT PPWIMTSSV
Sbjct: 235 DYASWLGQNQIPMTIIFTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSV 294
Query: 287 TNQGRDEILLHMAQLRNYWLKH 308
T+QGRDEILLH+AQLRNYWLKH
Sbjct: 295 THQGRDEILLHIAQLRNYWLKH 316
>gi|21592799|gb|AAM64748.1| putative GTP-binding protein [Arabidopsis thaliana]
Length = 318
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/319 (74%), Positives = 269/319 (84%), Gaps = 12/319 (3%)
Query: 1 MLFSQLPRLNFSIFVKPPLSLRSHFTLL--PKHRLNFS------ALKSTLSTTEPIP--I 50
M+ + LPR + SI KP SL S PK + S A KS L+T EPIP +
Sbjct: 1 MILAHLPRFHLSILAKPSFSLSSSHFSFLNPKPSVTVSRTLFSFASKSNLATVEPIPLSV 60
Query: 51 SHAVEPEPEPHVAISLEKLFVPPETEVSIDDS-SLSTRILKGSNIVLSKYARDAQVAQAE 109
S + + + P I+L+KLF+PPET++S +DS SL+TRILKGSNIVLSKYARDAQV QA+
Sbjct: 61 SDSTDLDDAP-AEIALDKLFIPPETDISGEDSASLTTRILKGSNIVLSKYARDAQVVQAD 119
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
+VKSSV+TEDCP+DGLPEFALVGRSNVGKSSLLNSLVRRK+LALTSK PGKTQCINHFRI
Sbjct: 120 YVKSSVKTEDCPADGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRI 179
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
ND WYLVDLPGYGYA+AP EL+ DW+KFTKDYFLNRSTLVSVFLL+DASIP KPIDLEYA
Sbjct: 180 NDKWYLVDLPGYGYASAPHELKQDWNKFTKDYFLNRSTLVSVFLLVDASIPVKPIDLEYA 239
Query: 230 SWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQ 289
SWLGQNQ+PMTL+FTKCDKRKKKKNGGK+PE N+ +FQ+LIQGFF+T PPWIMTSSVTNQ
Sbjct: 240 SWLGQNQVPMTLIFTKCDKRKKKKNGGKKPEANIKEFQDLIQGFFETTPPWIMTSSVTNQ 299
Query: 290 GRDEILLHMAQLRNYWLKH 308
GRDEILLHMAQLRNYWLKH
Sbjct: 300 GRDEILLHMAQLRNYWLKH 318
>gi|225430037|ref|XP_002284246.1| PREDICTED: GTP-binding protein At2g22870 [Vitis vinifera]
gi|296081893|emb|CBI20898.3| unnamed protein product [Vitis vinifera]
Length = 307
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 240/312 (76%), Positives = 265/312 (84%), Gaps = 9/312 (2%)
Query: 1 MLFSQLPRLNFSIFVK-PPLSLRSHFTLL---PKHRLNFSALKSTLSTTEPIPISHAVEP 56
M+ + LP+L+ F+ PP SL +H L PK L +A +T STT P PIS
Sbjct: 1 MVVTHLPKLHTHFFISTPPPSLYTHHLSLLRIPKSTLTTAATAATSSTTHPPPIS----- 55
Query: 57 EPEPHVAISLEKLFVPPETEVSIDDSSLSTRILKGSNIVLSKYARDAQVAQAEFVKSSVR 116
P+ H+ I L+ LFVPPET++S + L+ RILKGSNIVLSKYA DAQV QAEFVKSSVR
Sbjct: 56 TPDTHIQIPLQNLFVPPETDISATSTPLTARILKGSNIVLSKYANDAQVVQAEFVKSSVR 115
Query: 117 TEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLV 176
TEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRK+LALTSK PGKTQCINHFRINDSWYLV
Sbjct: 116 TEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRINDSWYLV 175
Query: 177 DLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQ 236
DLPGYGYAAAP+ELRTDW+KFTKDYF +RSTLVSVFLL+DASIPAK IDLEYASWLG+NQ
Sbjct: 176 DLPGYGYAAAPQELRTDWNKFTKDYFQSRSTLVSVFLLVDASIPAKKIDLEYASWLGENQ 235
Query: 237 IPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILL 296
IPMTL+FTKCDKRKKKKNGGKRPEEN+ DFQ LI+ FFQTAPPWIMTSSV+NQGRDEILL
Sbjct: 236 IPMTLIFTKCDKRKKKKNGGKRPEENVEDFQGLIRDFFQTAPPWIMTSSVSNQGRDEILL 295
Query: 297 HMAQLRNYWLKH 308
HMAQLRNYWLKH
Sbjct: 296 HMAQLRNYWLKH 307
>gi|356515571|ref|XP_003526472.1| PREDICTED: GTP-binding protein At2g22870-like [Glycine max]
Length = 293
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/270 (82%), Positives = 244/270 (90%), Gaps = 11/270 (4%)
Query: 39 KSTLSTTEPIPISHAVEPEPEPHVAISLEKLFVPPETEVSIDDSSLSTRILKGSNIVLSK 98
KSTL+T++P+ V P P +SLEKLFVPPET VS++ S+R+L GSNI+LS
Sbjct: 35 KSTLTTSQPL----TVNPSP---TELSLEKLFVPPETTVSLE----SSRVLNGSNILLSN 83
Query: 99 YARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTP 158
YA DAQV QAEFVKSSV+TEDCPSDG+PEFALVGRSNVGKSSLLNSLVRRKKLALTSK P
Sbjct: 84 YANDAQVLQAEFVKSSVKTEDCPSDGIPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKP 143
Query: 159 GKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDAS 218
GKTQCINHFRIN+SWYLVDLPGYGYA+AP ELR DW+KFTKDYFLNRSTLVSVFLLIDAS
Sbjct: 144 GKTQCINHFRINNSWYLVDLPGYGYASAPHELRMDWEKFTKDYFLNRSTLVSVFLLIDAS 203
Query: 219 IPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP 278
IPAK IDL+YASWLGQNQIPMTL+FTKCDKRKKKKNGGKRPE+N+NDFQ+LI+GFFQ+ P
Sbjct: 204 IPAKQIDLDYASWLGQNQIPMTLIFTKCDKRKKKKNGGKRPEDNVNDFQDLIRGFFQSVP 263
Query: 279 PWIMTSSVTNQGRDEILLHMAQLRNYWLKH 308
PWIMTSSVTNQGRDEILLHMAQLRNYWLKH
Sbjct: 264 PWIMTSSVTNQGRDEILLHMAQLRNYWLKH 293
>gi|356507873|ref|XP_003522687.1| PREDICTED: GTP-binding protein At2g22870-like [Glycine max]
Length = 293
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 233/311 (74%), Positives = 260/311 (83%), Gaps = 21/311 (6%)
Query: 1 MLFSQLPRLN-FSIFVKPPLSLRSH--FTLLPKHRLNFSALKSTLSTTEPIPISHAVEPE 57
M+ LPR + + + P L+LR++ TLL KSTL+ +EP+ +V P
Sbjct: 1 MVLLHLPRFPLYLVTLSPSLTLRAYSKTTLL-------RPPKSTLTASEPV----SVNPS 49
Query: 58 PEPHVAISLEKLFVPPETEVSIDDSSLSTRILKGSNIVLSKYARDAQVAQAEFVKSSVRT 117
P +SLEKLFVPPET VS++ S+R+L GSNI+LS YA DA V QAEFVKSSV+T
Sbjct: 50 P---TELSLEKLFVPPETTVSLE----SSRVLNGSNILLSNYANDALVLQAEFVKSSVKT 102
Query: 118 EDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVD 177
EDCPSDGL EFALVGRSNVGKSSLLNSLVRRKKLALTSK PGKTQCINHFRIN+SWYLVD
Sbjct: 103 EDCPSDGLAEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINNSWYLVD 162
Query: 178 LPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQI 237
LPGYGYA+AP ELR DW+KFTKDYFLNRSTLVSVFLLIDASIPAK IDL+YASWLGQNQI
Sbjct: 163 LPGYGYASAPHELRMDWEKFTKDYFLNRSTLVSVFLLIDASIPAKQIDLDYASWLGQNQI 222
Query: 238 PMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLH 297
PMTL+FTKCDKRKKKKNGGKRPEEN+NDFQ+LI+GFFQ+ PPWIMTSSVTNQGRDEILLH
Sbjct: 223 PMTLIFTKCDKRKKKKNGGKRPEENVNDFQDLIRGFFQSVPPWIMTSSVTNQGRDEILLH 282
Query: 298 MAQLRNYWLKH 308
MAQLRNYWLKH
Sbjct: 283 MAQLRNYWLKH 293
>gi|357466639|ref|XP_003603604.1| Ribosome biogenesis GTP-binding protein YsxC [Medicago truncatula]
gi|355492652|gb|AES73855.1| Ribosome biogenesis GTP-binding protein YsxC [Medicago truncatula]
Length = 301
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/270 (78%), Positives = 242/270 (89%), Gaps = 8/270 (2%)
Query: 39 KSTLSTTEPIPISHAVEPEPEPHVAISLEKLFVPPETEVSIDDSSLSTRILKGSNIVLSK 98
KS+L+T+EP + + P+ EP +SLEKLF+PP T V+ +++ RIL GSNI+LS
Sbjct: 40 KSSLTTSEP-NLEPIITPKTEP---LSLEKLFIPPNTHVTHENA----RILNGSNILLSN 91
Query: 99 YARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTP 158
YA DAQ+ QA+FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNS+VRRKKLALTSK P
Sbjct: 92 YANDAQIIQADFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSIVRRKKLALTSKKP 151
Query: 159 GKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDAS 218
GKTQ INHFR+NDSWYLVDLPGYGYA+AP+ELR DW KFTKDYFLNRSTLVSVFLLIDAS
Sbjct: 152 GKTQLINHFRVNDSWYLVDLPGYGYASAPQELRMDWAKFTKDYFLNRSTLVSVFLLIDAS 211
Query: 219 IPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP 278
IPA+ IDLEYA+WLG+N+IPMTL+FTKCDKRKKKKNGGKRPE+N+NDFQELI+G F+T P
Sbjct: 212 IPARKIDLEYAAWLGENKIPMTLIFTKCDKRKKKKNGGKRPEDNVNDFQELIRGSFETVP 271
Query: 279 PWIMTSSVTNQGRDEILLHMAQLRNYWLKH 308
PWIMTS+VT+QGRDEILLHMAQLRNYWLKH
Sbjct: 272 PWIMTSNVTHQGRDEILLHMAQLRNYWLKH 301
>gi|115439749|ref|NP_001044154.1| Os01g0732200 [Oryza sativa Japonica Group]
gi|57899709|dbj|BAD87429.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113533685|dbj|BAF06068.1| Os01g0732200 [Oryza sativa Japonica Group]
gi|215695283|dbj|BAG90474.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 316
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/288 (70%), Positives = 238/288 (82%), Gaps = 5/288 (1%)
Query: 26 TLLPKHRL---NFSALKSTLSTTEPIPISHAVEPEPEPHVAISLEKLFVPPETEVSIDDS 82
+L P R+ SAL + E + S EP+ + V + L++LFVPP VS D+
Sbjct: 29 SLFPTRRILSPCCSALSQVAAAPETVDHSDGDEPQGDVQVQLPLDRLFVPPGASVSAGDA 88
Query: 83 -SLSTRILKGSNIVLSKYAR-DAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSS 140
+++ R+LKGSNIVL YAR DA V A+FVKSSVR +DCP DGLPEFALVGRSNVGKSS
Sbjct: 89 EAVTARVLKGSNIVLGPYARGDANVIAADFVKSSVRPDDCPRDGLPEFALVGRSNVGKSS 148
Query: 141 LLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKD 200
LLNSLVRRK+LALTSK PGKTQCINHF++NDSWYLVDLPGYGYAAAP+E RT+WD+FT++
Sbjct: 149 LLNSLVRRKRLALTSKKPGKTQCINHFKVNDSWYLVDLPGYGYAAAPQEARTNWDEFTRN 208
Query: 201 YFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPE 260
YFL R LVSVFLL+DASIPAK IDL+YASWLGQN++PMTLVFTKCDKRKKKKNGGKRPE
Sbjct: 209 YFLGRENLVSVFLLVDASIPAKKIDLDYASWLGQNKVPMTLVFTKCDKRKKKKNGGKRPE 268
Query: 261 ENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQLRNYWLKH 308
EN+ +FQ LI+ +F+ APPWIMTSSVTNQGRDEILLHM+QLRNYWLKH
Sbjct: 269 ENVENFQSLIREYFEAAPPWIMTSSVTNQGRDEILLHMSQLRNYWLKH 316
>gi|242054307|ref|XP_002456299.1| hypothetical protein SORBIDRAFT_03g033710 [Sorghum bicolor]
gi|241928274|gb|EES01419.1| hypothetical protein SORBIDRAFT_03g033710 [Sorghum bicolor]
Length = 312
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/255 (76%), Positives = 224/255 (87%), Gaps = 2/255 (0%)
Query: 56 PEPEPHVAISLEKLFVPPETEVSI-DDSSLSTRILKGSNIVLSKYAR-DAQVAQAEFVKS 113
P+ + V + L++LFVPP V D ++S R+LKGSNIVL YAR DAQV A+FVKS
Sbjct: 58 PQGKVQVQLPLDRLFVPPGATVDAGDQDAVSARVLKGSNIVLGPYARGDAQVVNADFVKS 117
Query: 114 SVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSW 173
SVR +DCP DGLPEFALVGRSNVGKSSLLNSLVRRK+LALTSK PGKTQCINHF++NDSW
Sbjct: 118 SVRPDDCPRDGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFKVNDSW 177
Query: 174 YLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLG 233
YLVDLPGYGYA+AP+E RT+WD+FT++YFL+R LVSVFLLIDASIPAK IDL+YASWLG
Sbjct: 178 YLVDLPGYGYASAPQEARTNWDEFTRNYFLSRENLVSVFLLIDASIPAKKIDLDYASWLG 237
Query: 234 QNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDE 293
QN++PMTLVFTKCDKRKKKKNGG+RPEEN+ FQ LI+ +F+ APPWIMTSSVTNQGRDE
Sbjct: 238 QNKVPMTLVFTKCDKRKKKKNGGRRPEENVETFQSLIREYFEAAPPWIMTSSVTNQGRDE 297
Query: 294 ILLHMAQLRNYWLKH 308
ILLHM+QLRNYWLKH
Sbjct: 298 ILLHMSQLRNYWLKH 312
>gi|194689944|gb|ACF79056.1| unknown [Zea mays]
gi|194693496|gb|ACF80832.1| unknown [Zea mays]
gi|195626284|gb|ACG34972.1| GTP-binding protein [Zea mays]
gi|223946703|gb|ACN27435.1| unknown [Zea mays]
gi|414880639|tpg|DAA57770.1| TPA: GTP-binding protein [Zea mays]
Length = 313
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/255 (75%), Positives = 223/255 (87%), Gaps = 2/255 (0%)
Query: 56 PEPEPHVAISLEKLFVPPETEVSI-DDSSLSTRILKGSNIVLSKYAR-DAQVAQAEFVKS 113
P+ E + + L+ LFVPP + D ++S R+LKGSNIVL YAR DAQV A+FVKS
Sbjct: 59 PQGEGQIKLPLDHLFVPPGATMDAGDQEAVSARVLKGSNIVLGPYARGDAQVVNADFVKS 118
Query: 114 SVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSW 173
SVR +DCP DGLPEFALVGRSNVGKSSLLNSLVRRK+LALTSK PGKTQCINHF++NDSW
Sbjct: 119 SVRPDDCPRDGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFKVNDSW 178
Query: 174 YLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLG 233
YLVDLPGYGYA+AP+E RT+WD+FT++YFL+R LVSVFLLIDASIPAK IDL+YASWLG
Sbjct: 179 YLVDLPGYGYASAPQEARTNWDEFTRNYFLSRENLVSVFLLIDASIPAKKIDLDYASWLG 238
Query: 234 QNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDE 293
QN++PMTLVFTKCDKRKKKKNGG++PEEN+ FQ LI+ +F+ APPWIMTSSVTNQGRDE
Sbjct: 239 QNKVPMTLVFTKCDKRKKKKNGGRKPEENVETFQGLIREYFEAAPPWIMTSSVTNQGRDE 298
Query: 294 ILLHMAQLRNYWLKH 308
ILLHM+QLRNYWLKH
Sbjct: 299 ILLHMSQLRNYWLKH 313
>gi|357136280|ref|XP_003569733.1| PREDICTED: GTP-binding protein At2g22870-like [Brachypodium
distachyon]
Length = 335
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/256 (75%), Positives = 223/256 (87%), Gaps = 2/256 (0%)
Query: 55 EPEPEPHVAISLEKLFVPPETEVSI-DDSSLSTRILKGSNIVLSKYAR-DAQVAQAEFVK 112
EP E V + L++LF+PP V+ D+ +++ R+LKGSNIVL YAR DAQV A+FVK
Sbjct: 80 EPLGEVQVQLPLDRLFLPPGANVTPGDEEAVTGRVLKGSNIVLGTYARGDAQVVAADFVK 139
Query: 113 SSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDS 172
SSVR +DCP DGLPEFALVGRSNVGKSSLLNS+VRRK+LALTSK PGKTQCINHF+INDS
Sbjct: 140 SSVRPDDCPRDGLPEFALVGRSNVGKSSLLNSIVRRKRLALTSKKPGKTQCINHFKINDS 199
Query: 173 WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWL 232
WYLVDLPGYGYA+AP+E R DWD FT++YFL+R LVSVFLLIDASIPAK IDL+YASWL
Sbjct: 200 WYLVDLPGYGYASAPQEARKDWDAFTRNYFLSRDNLVSVFLLIDASIPAKKIDLDYASWL 259
Query: 233 GQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRD 292
GQN++PMTLVFTKCDKRKKKKNGG+RPEEN+ FQ LI+ +F+ APPWIMTSSVTNQGRD
Sbjct: 260 GQNKVPMTLVFTKCDKRKKKKNGGRRPEENVEYFQNLIREYFEAAPPWIMTSSVTNQGRD 319
Query: 293 EILLHMAQLRNYWLKH 308
EILLHM+QLRNYW KH
Sbjct: 320 EILLHMSQLRNYWRKH 335
>gi|218189008|gb|EEC71435.1| hypothetical protein OsI_03633 [Oryza sativa Indica Group]
gi|222619209|gb|EEE55341.1| hypothetical protein OsJ_03357 [Oryza sativa Japonica Group]
Length = 344
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/316 (64%), Positives = 238/316 (75%), Gaps = 33/316 (10%)
Query: 26 TLLPKHRL---NFSALKSTLSTTEPIPISHAVEPEPEPHVAISLEKLFVPPETEVSIDDS 82
+L P R+ SAL + E + S EP+ + V + L++LFVPP VS D+
Sbjct: 29 SLFPTRRILSPCCSALSQVAAAPETVDHSDGDEPQGDVQVQLPLDRLFVPPGASVSAGDA 88
Query: 83 -SLSTRILKGSNIVLSKYAR-DAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSS 140
+++ R+LKGSNIVL YAR DA V A+FVKSSVR +DCP DGLPEFALVGRSNVGKSS
Sbjct: 89 EAVTARVLKGSNIVLGPYARGDANVIAADFVKSSVRPDDCPRDGLPEFALVGRSNVGKSS 148
Query: 141 LLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKD 200
LLNSLVRRK+LALTSK PGKTQCINHF++NDSWYLVDLPGYGYAAAP+E RT+WD+FT++
Sbjct: 149 LLNSLVRRKRLALTSKKPGKTQCINHFKVNDSWYLVDLPGYGYAAAPQEARTNWDEFTRN 208
Query: 201 YFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQ------------------------ 236
YFL R LVSVFLL+DASIPAK IDL+YASWLGQN+
Sbjct: 209 YFLGRENLVSVFLLVDASIPAKKIDLDYASWLGQNKCKIQKSSQTSNYVGINLVPETPLK 268
Query: 237 ----IPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRD 292
+PMTLVFTKCDKRKKKKNGGKRPEEN+ +FQ LI+ +F+ APPWIMTSSVTNQGRD
Sbjct: 269 TSSNVPMTLVFTKCDKRKKKKNGGKRPEENVENFQSLIREYFEAAPPWIMTSSVTNQGRD 328
Query: 293 EILLHMAQLRNYWLKH 308
EILLHM+QLRNYWLKH
Sbjct: 329 EILLHMSQLRNYWLKH 344
>gi|294461092|gb|ADE76113.1| unknown [Picea sitchensis]
Length = 335
Score = 359 bits (922), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 180/255 (70%), Positives = 210/255 (82%), Gaps = 3/255 (1%)
Query: 54 VEPEPEPHVAISLEKLFVPPETEVSIDDSSLSTRILKGSNIVLSKYARDAQVAQAEFVKS 113
V E + I L++LF+PP E S +++ + L+GSNIV+S YA DAQ+ QAEF+KS
Sbjct: 84 VAAESSSEMPIPLDRLFIPPGVEASQLNTA---KRLEGSNIVISPYAYDAQIEQAEFIKS 140
Query: 114 SVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSW 173
S R E+CP +G PEFALVGRSNVGKSSL+NSLVRRK+LA+TSK PGKTQ INHF IN+SW
Sbjct: 141 SSRVEECPMNGYPEFALVGRSNVGKSSLVNSLVRRKQLAMTSKKPGKTQLINHFLINNSW 200
Query: 174 YLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLG 233
YLVDLPGYGYA APR +RT+W+ FTKDYFLNR LV V LLIDASIPAK ID+E A+WLG
Sbjct: 201 YLVDLPGYGYAIAPRAVRTEWNAFTKDYFLNRKALVCVLLLIDASIPAKEIDIECATWLG 260
Query: 234 QNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDE 293
QNQIPM VFTKCDKRKK+KNG KRPEEN+ DFQ LI+ F+Q PPWIMTSSVTNQGRDE
Sbjct: 261 QNQIPMAFVFTKCDKRKKRKNGNKRPEENIYDFQNLIREFYQETPPWIMTSSVTNQGRDE 320
Query: 294 ILLHMAQLRNYWLKH 308
+LLH+AQL+NYWL H
Sbjct: 321 LLLHIAQLKNYWLTH 335
>gi|226500762|ref|NP_001140242.1| uncharacterized protein LOC100272283 [Zea mays]
gi|194698666|gb|ACF83417.1| unknown [Zea mays]
gi|414880640|tpg|DAA57771.1| TPA: hypothetical protein ZEAMMB73_007341 [Zea mays]
Length = 354
Score = 357 bits (916), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 193/296 (65%), Positives = 223/296 (75%), Gaps = 43/296 (14%)
Query: 56 PEPEPHVAISLEKLFVPPETEVSI-DDSSLSTRILKGSNIVLSKYAR-DAQVAQAEFVKS 113
P+ E + + L+ LFVPP + D ++S R+LKGSNIVL YAR DAQV A+FVKS
Sbjct: 59 PQGEGQIKLPLDHLFVPPGATMDAGDQEAVSARVLKGSNIVLGPYARGDAQVVNADFVKS 118
Query: 114 SVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSW 173
SVR +DCP DGLPEFALVGRSNVGKSSLLNSLVRRK+LALTSK PGKTQCINHF++NDSW
Sbjct: 119 SVRPDDCPRDGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFKVNDSW 178
Query: 174 YLVDLPGYG-----------------------------------------YAAAPRELRT 192
YLVDLPGYG YA+AP+E RT
Sbjct: 179 YLVDLPGYGPARPFLGEIEGESRALLLQILLEWIWQQSPTHGLSKKLVRIYASAPQEART 238
Query: 193 DWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKK 252
+WD+FT++YFL+R LVSVFLLIDASIPAK IDL+YASWLGQN++PMTLVFTKCDKRKKK
Sbjct: 239 NWDEFTRNYFLSRENLVSVFLLIDASIPAKKIDLDYASWLGQNKVPMTLVFTKCDKRKKK 298
Query: 253 KNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQLRNYWLKH 308
KNGG++PEEN+ FQ LI+ +F+ APPWIMTSSVTNQGRDEILLHM+QLRNYWLKH
Sbjct: 299 KNGGRKPEENVETFQGLIREYFEAAPPWIMTSSVTNQGRDEILLHMSQLRNYWLKH 354
>gi|356546231|ref|XP_003541533.1| PREDICTED: GTP-binding protein At2g22870-like [Glycine max]
Length = 305
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 165/278 (59%), Positives = 203/278 (73%), Gaps = 21/278 (7%)
Query: 30 KHRLNFSALKSTLSTTEPIPISHAVEPEPEPHVAISLE-KLFVPPETEVS-IDDSSLSTR 87
+H L+ S+ S TT P+P S S E +LF+PP E +DDS+
Sbjct: 45 RHPLSHSSNASKTPTTNPLPSS-------------SFESQLFIPPGIEPDEVDDST---- 87
Query: 88 ILKGSNIVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVR 147
+L GSNI + YA D+++ +FVKSS R DCP D LPEFA++GRSNVGKSSL+NSLVR
Sbjct: 88 VLPGSNIAVGPYAGDSRIKDVQFVKSSARARDCPKDDLPEFAVLGRSNVGKSSLINSLVR 147
Query: 148 RKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRST 207
+K++ALTSK PGKTQ INHF +N SWYLVDLPGYG+A AP +TDW FTK YFLNRST
Sbjct: 148 KKEIALTSKKPGKTQLINHFLVNKSWYLVDLPGYGFAKAPEAAKTDWSSFTKGYFLNRST 207
Query: 208 LVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQ 267
LV+V LLIDAS+P + +DL+ A+WLG+N IP+T VFTKCDK K K GKRP+EN+ DFQ
Sbjct: 208 LVAVLLLIDASVPPQKVDLDCANWLGRNNIPITFVFTKCDKMKVAK--GKRPDENIRDFQ 265
Query: 268 ELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQLRNYW 305
ELI+ ++ PPWIMTSSVT GRDE+LLHM+QLRNYW
Sbjct: 266 ELIRQNYKQHPPWIMTSSVTGMGRDELLLHMSQLRNYW 303
>gi|356521366|ref|XP_003529327.1| PREDICTED: GTP-binding protein At2g22870-like [Glycine max]
Length = 301
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 151/239 (63%), Positives = 185/239 (77%), Gaps = 7/239 (2%)
Query: 68 KLFVPPETEVS-IDDSSLSTRILKGSNIVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLP 126
+LF+PP E ++DS+ +L GSNI + YA D+ + +FVKSS R DCP D P
Sbjct: 67 QLFIPPGIEPDEVNDST----VLPGSNIAVGPYAGDSHIKDVQFVKSSARARDCPKDNRP 122
Query: 127 EFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYGYAAA 186
EFA++GRSNVGKSSL+NSLVR+K++ALTSK PGKTQ INHF +N SWYLVDLPGYG+A A
Sbjct: 123 EFAVLGRSNVGKSSLINSLVRKKEIALTSKKPGKTQLINHFLVNKSWYLVDLPGYGFAKA 182
Query: 187 PRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKC 246
P +TDW FTK YFLN+STLV+V LLIDAS+P + IDL+ A+WLG+N IP+T VFTKC
Sbjct: 183 PEAAKTDWSSFTKGYFLNKSTLVAVLLLIDASVPPQKIDLDCANWLGRNNIPITFVFTKC 242
Query: 247 DKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQLRNYW 305
DK K K GKRP+EN+ DFQELI+ ++ PPWIMTSS T GRDE+LLHM+QLRNYW
Sbjct: 243 DKMKVAK--GKRPDENIRDFQELIRQNYKQHPPWIMTSSATGMGRDELLLHMSQLRNYW 299
>gi|226530446|ref|NP_001151819.1| GTP-binding protein [Zea mays]
gi|194700920|gb|ACF84544.1| unknown [Zea mays]
gi|195649961|gb|ACG44448.1| GTP-binding protein [Zea mays]
gi|413956461|gb|AFW89110.1| GTP-binding protein [Zea mays]
Length = 308
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 170/306 (55%), Positives = 204/306 (66%), Gaps = 14/306 (4%)
Query: 7 PRLNFSIFVKPPLSLRSHFTLLPKHR-LNFSALKSTLS----TTEPIPISHAVEPEP--E 59
PR +F V PP R+ +P R L+ SA T S + P+P + P
Sbjct: 5 PRPSFFRAVVPPPLTRA---CVPSRRTLSASAEAGTASPKDAASAPVPAATRKNPRKAGS 61
Query: 60 PHVAISLEKLFVPPETEVSIDDSSLSTRILKGSNIVLSKYARDAQVAQAEFVKSSVRTED 119
P + I LF+PP E D + ++ GSNIV+ YA DA+V AEFVKSS R D
Sbjct: 62 PPMGIVKTALFLPPGVER--DALVPADMVIPGSNIVVGPYAGDARVKGAEFVKSSARARD 119
Query: 120 CPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLP 179
CP+D PEFA++GRSNVGKSSL+N+L RRK+ ALTSK PGKTQ INHF +N SWYLVDLP
Sbjct: 120 CPNDDRPEFAVLGRSNVGKSSLINALTRRKEAALTSKKPGKTQTINHFLVNKSWYLVDLP 179
Query: 180 GYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPM 239
GYG+AAA + R DW FTK YFLNR TLV V LLIDASIP + IDL+ A+WLG+N I +
Sbjct: 180 GYGFAAASQSARMDWSSFTKGYFLNRDTLVGVLLLIDASIPPQKIDLDCANWLGRNNIGL 239
Query: 240 TLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMA 299
T VFTKCDK KK K G RP+EN+ +F E I G + PPWIMTSSVT GRD +LLHM+
Sbjct: 240 TFVFTKCDKVKKGKGG--RPDENIKEFHETISGLYPDPPPWIMTSSVTGLGRDGLLLHMS 297
Query: 300 QLRNYW 305
QLRNYW
Sbjct: 298 QLRNYW 303
>gi|116781116|gb|ABK21971.1| unknown [Picea sitchensis]
Length = 317
Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 161/269 (59%), Positives = 199/269 (73%), Gaps = 11/269 (4%)
Query: 37 ALKSTLSTTEPIPISHAVEPEPEPHVAISLEKLFVPPETEVSIDDSSLSTRILKGSNIVL 96
AL S S P S A +P +++LF+PP E D + IL GSNIV+
Sbjct: 58 ALPSKESDAADHPSSGATKPP--------VDRLFIPPGVE---RDKIKAEMILPGSNIVV 106
Query: 97 SKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSK 156
YA DA++ Q EFVKSS R +DCP + LPE A++GRSNVGKSSL+NSLVR+K +A+TSK
Sbjct: 107 GPYAGDAKIKQVEFVKSSGRAKDCPKNALPEIAMMGRSNVGKSSLINSLVRKKDVAMTSK 166
Query: 157 TPGKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLID 216
TPGKTQ INHF IN SWY+VDLPGYGYA AP RTDW FTK YFLNR T+V+V LLID
Sbjct: 167 TPGKTQLINHFLINKSWYIVDLPGYGYANAPDSARTDWSTFTKGYFLNRDTIVTVLLLID 226
Query: 217 ASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQT 276
AS+P + +DL+ A+WLG+N IP+T VFTKCDK+K K+G KRPEEN+ +FQ+LI ++
Sbjct: 227 ASVPPQKMDLDCANWLGRNNIPLTFVFTKCDKKKSGKSGVKRPEENIKEFQDLISKKYRE 286
Query: 277 APPWIMTSSVTNQGRDEILLHMAQLRNYW 305
PPWIMTSSVTN GRD++LLH++QLRNYW
Sbjct: 287 PPPWIMTSSVTNLGRDDLLLHLSQLRNYW 315
>gi|242036437|ref|XP_002465613.1| hypothetical protein SORBIDRAFT_01g042170 [Sorghum bicolor]
gi|241919467|gb|EER92611.1| hypothetical protein SORBIDRAFT_01g042170 [Sorghum bicolor]
Length = 310
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 154/246 (62%), Positives = 181/246 (73%), Gaps = 4/246 (1%)
Query: 60 PHVAISLEKLFVPPETEVSIDDSSLSTRILKGSNIVLSKYARDAQVAQAEFVKSSVRTED 119
P + I LF+PP E D + + ++ GSNIV+ YA DA+V +AEFVKSS R D
Sbjct: 64 PPMGIVKTALFLPPGVER--DATVAADMVIPGSNIVVGPYAGDARVKEAEFVKSSARARD 121
Query: 120 CPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLP 179
CP D PEFA++GRSNVGKSSL+N+L RRK+ ALTSK PGKTQ INHF +N SWYLVDLP
Sbjct: 122 CPKDDRPEFAVLGRSNVGKSSLINALTRRKEAALTSKKPGKTQTINHFLVNKSWYLVDLP 181
Query: 180 GYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPM 239
GYG+AAA + R DW FTK YFLNR TLV V LLIDASIP + IDL+ A+WLG+N I +
Sbjct: 182 GYGFAAASQSARMDWSSFTKGYFLNRDTLVGVLLLIDASIPPQKIDLDCANWLGRNNIGL 241
Query: 240 TLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMA 299
T VFTKCDK KK K G RP+EN+ FQE I G + PPWIMTSSVT GRD +LLHM+
Sbjct: 242 TFVFTKCDKVKKGKGG--RPDENIKQFQETISGLYPDPPPWIMTSSVTGLGRDGLLLHMS 299
Query: 300 QLRNYW 305
QLRNYW
Sbjct: 300 QLRNYW 305
>gi|115451735|ref|NP_001049468.1| Os03g0232500 [Oryza sativa Japonica Group]
gi|108707011|gb|ABF94806.1| GTP-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113547939|dbj|BAF11382.1| Os03g0232500 [Oryza sativa Japonica Group]
gi|215766877|dbj|BAG99105.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 318
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/237 (62%), Positives = 178/237 (75%), Gaps = 4/237 (1%)
Query: 69 LFVPPETEVSIDDSSLSTRILKGSNIVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEF 128
LF PP V D + + ++ SNIV+ YA D++V +AEFVKSS R DCP D PEF
Sbjct: 78 LFFPPG--VDRDAAVAAEMVIPASNIVVGPYAGDSRVKEAEFVKSSARARDCPKDDRPEF 135
Query: 129 ALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYGYAAAPR 188
A++GRSNVGKSSL+N+L+RRK+ ALTSK PGKTQ INHF +N SWYLVDLPGYG+AAA +
Sbjct: 136 AVLGRSNVGKSSLINALIRRKEAALTSKKPGKTQTINHFLVNKSWYLVDLPGYGFAAASQ 195
Query: 189 ELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDK 248
RTDW FTK YFLNR TLV V LL+DASIP + ID++ A+WLG+N I +T VFTKCDK
Sbjct: 196 SARTDWSSFTKGYFLNRDTLVGVLLLVDASIPPQKIDIDCANWLGRNNIGLTYVFTKCDK 255
Query: 249 RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQLRNYW 305
KK K G RPEEN+ +FQE I + PPWIMTSSVT GRD +LLHM+QLRNYW
Sbjct: 256 SKKGKGG--RPEENIKEFQETISSLYPEPPPWIMTSSVTGLGRDGLLLHMSQLRNYW 310
>gi|255568647|ref|XP_002525297.1| GTP-binding protein engB, putative [Ricinus communis]
gi|223535455|gb|EEF37125.1| GTP-binding protein engB, putative [Ricinus communis]
Length = 296
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 150/239 (62%), Positives = 181/239 (75%), Gaps = 9/239 (3%)
Query: 69 LFVPPETEVSIDDSSLSTRILKGSNIVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEF 128
LFVPP + D +L GSNIV+ YA +Q+ + EFVKSS R DCP + PEF
Sbjct: 63 LFVPPGVD---PDEVTENMVLPGSNIVVGPYAGHSQIKEVEFVKSSSRARDCPREDRPEF 119
Query: 129 ALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYGYAAAPR 188
A++GRSNVGKSSL+N+LVR+K++ALTSK PGKTQ INHF +N SWY+VDLPGYG+A AP
Sbjct: 120 AILGRSNVGKSSLINALVRKKEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPA 179
Query: 189 ELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDK 248
+TDW FTK YFLNR TLV+V LLIDAS+P + IDL+ A WLG+N IP+T VFTKCDK
Sbjct: 180 SAQTDWSSFTKGYFLNRETLVAVLLLIDASVPPQKIDLDCADWLGRNNIPLTFVFTKCDK 239
Query: 249 RKKKKNGGK--RPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQLRNYW 305
K GGK RP+EN+ +FQELI+ +Q PPWIMTSSVT GRDE+LLHM+QLRNYW
Sbjct: 240 MK----GGKSTRPDENIRNFQELIRQNYQEHPPWIMTSSVTGLGRDELLLHMSQLRNYW 294
>gi|224095021|ref|XP_002310331.1| predicted protein [Populus trichocarpa]
gi|222853234|gb|EEE90781.1| predicted protein [Populus trichocarpa]
Length = 302
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 151/239 (63%), Positives = 180/239 (75%), Gaps = 9/239 (3%)
Query: 69 LFVPPETEVSIDDSSLSTRILKGSNIVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEF 128
LFVPP + D IL GSNIV+ YA +Q+ + EFVKSS R +DCP D PEF
Sbjct: 69 LFVPPGVD---PDKVTEEIILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPRDDRPEF 125
Query: 129 ALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYGYAAAPR 188
A++GRSNVGKSSL+N L R+K++ALTSK PGKTQ INHF +N SWYLVDLPGYG+A AP
Sbjct: 126 AILGRSNVGKSSLINVLARKKEVALTSKKPGKTQLINHFLVNKSWYLVDLPGYGFAKAPD 185
Query: 189 ELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDK 248
R DW FTK YFLNR TLV+V LLIDAS+P + IDL+ A+WLG+N IPMTLVFTKCDK
Sbjct: 186 SARMDWSSFTKGYFLNRETLVAVLLLIDASVPPQKIDLDCANWLGRNNIPMTLVFTKCDK 245
Query: 249 RKKKKNGGK--RPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQLRNYW 305
K GGK RP+EN+ +FQEL++ ++ P WIMTSSVT GRDE+LLHM+QLRNYW
Sbjct: 246 MK----GGKRTRPDENIKNFQELMRQNYREHPAWIMTSSVTGLGRDELLLHMSQLRNYW 300
>gi|449532169|ref|XP_004173055.1| PREDICTED: GTP-binding protein At2g22870-like [Cucumis sativus]
Length = 219
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/218 (65%), Positives = 172/218 (78%), Gaps = 2/218 (0%)
Query: 88 ILKGSNIVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVR 147
+L GSNIVL YA D++V + EFVKSS R DCP D PEFA++GRSNVGKSSL+N+LVR
Sbjct: 2 LLPGSNIVLGPYAGDSRVKEVEFVKSSARARDCPKDSKPEFAILGRSNVGKSSLINALVR 61
Query: 148 RKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRST 207
+K++ALTSK PGKTQ INHF +N SWY+VDLPGYG+A R DW FTK YF+NR T
Sbjct: 62 KKEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKVSETARMDWSSFTKGYFMNRDT 121
Query: 208 LVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQ 267
LV+V LLIDAS+P + IDL+ A+WLG+N IPMT VFTKCDK K K GKRP+EN+ +FQ
Sbjct: 122 LVAVLLLIDASVPPQKIDLDCANWLGRNNIPMTFVFTKCDKMKVSK--GKRPDENIREFQ 179
Query: 268 ELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQLRNYW 305
+LI+ ++ P WIMTSSVT GRDE+LLHM+QLRNYW
Sbjct: 180 QLIRQNYKVHPSWIMTSSVTGLGRDELLLHMSQLRNYW 217
>gi|357113298|ref|XP_003558441.1| PREDICTED: GTP-binding protein At2g22870-like [Brachypodium
distachyon]
Length = 306
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/246 (60%), Positives = 179/246 (72%), Gaps = 5/246 (2%)
Query: 60 PHVAISLEKLFVPPETEVSIDDSSLSTRILKGSNIVLSKYARDAQVAQAEFVKSSVRTED 119
P V+++ LF PP E D + + ++ GSNIV+ YA DA+V +AEF+K S D
Sbjct: 61 PGVSVN-TALFFPPGVER--DAAVAAEMLIPGSNIVVGPYAGDARVKEAEFIKCSAHARD 117
Query: 120 CPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLP 179
CP D PEFA++GRSNVGKSSL+N+L RRK+ ALTSK PGKTQ INHF IN SWYLVDLP
Sbjct: 118 CPKDDRPEFAVLGRSNVGKSSLINALTRRKEAALTSKKPGKTQTINHFLINKSWYLVDLP 177
Query: 180 GYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPM 239
GYG+AAA + R DW FTK YFLNR TLV V LL+DASIP + IDL+ A+WLG+N + +
Sbjct: 178 GYGFAAASKSARMDWSSFTKGYFLNRDTLVGVLLLVDASIPPQQIDLDCANWLGRNNVGL 237
Query: 240 TLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMA 299
T VFTKCDK KK K G RP+EN+ +FQE I + PPWIMTSS T GRD +LLHM+
Sbjct: 238 TFVFTKCDKVKKGKGG--RPDENIKEFQENISSLYPEPPPWIMTSSTTGLGRDGLLLHMS 295
Query: 300 QLRNYW 305
QLRNYW
Sbjct: 296 QLRNYW 301
>gi|297821515|ref|XP_002878640.1| EMB2001 [Arabidopsis lyrata subsp. lyrata]
gi|297324479|gb|EFH54899.1| EMB2001 [Arabidopsis lyrata subsp. lyrata]
Length = 300
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/239 (59%), Positives = 178/239 (74%), Gaps = 9/239 (3%)
Query: 69 LFVPPETEVS--IDDSSLSTRILKGSNIVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLP 126
LF+PP E+ DD +L GSNIV+ +A +Q+ + EFVKSS R DCP D P
Sbjct: 67 LFIPPGVEIEELTDD-----MVLPGSNIVIGPFAGHSQIKEVEFVKSSARARDCPKDDRP 121
Query: 127 EFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYGYAAA 186
E A++GRSNVGKSSL+N LVR+K++ALTSK PGKTQ INHF +N SWY+VDLPGYG+A
Sbjct: 122 EIAILGRSNVGKSSLINCLVRKKEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKV 181
Query: 187 PRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKC 246
+TDW FTK YFLNR TLV + LLIDAS+P + IDL+ A+WLG+N +PMT VFTKC
Sbjct: 182 SDAAKTDWSAFTKGYFLNRDTLVCILLLIDASVPPQKIDLDCANWLGRNNVPMTFVFTKC 241
Query: 247 DKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQLRNYW 305
DK K K GKRP+EN+ FQ++I+ F+ PPWI+TSSV+ GRDE+LLHM+QLRNYW
Sbjct: 242 DKMKAAK--GKRPDENIKAFQQIIRENFKVHPPWILTSSVSGLGRDELLLHMSQLRNYW 298
>gi|18400109|ref|NP_565543.1| GTP-binding protein [Arabidopsis thaliana]
gi|21903474|sp|O81004.2|Y2287_ARATH RecName: Full=GTP-binding protein At2g22870; AltName: Full=Protein
EMBRYO DEFECTIVE 2001
gi|20197273|gb|AAC32434.2| putative nucleotide-binding protein [Arabidopsis thaliana]
gi|21592880|gb|AAM64830.1| putative nucleotide-binding protein [Arabidopsis thaliana]
gi|52354269|gb|AAU44455.1| hypothetical protein AT2G22870 [Arabidopsis thaliana]
gi|55740571|gb|AAV63878.1| hypothetical protein At2g22870 [Arabidopsis thaliana]
gi|330252273|gb|AEC07367.1| GTP-binding protein [Arabidopsis thaliana]
Length = 300
Score = 303 bits (775), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 143/239 (59%), Positives = 178/239 (74%), Gaps = 9/239 (3%)
Query: 69 LFVPPETEVS--IDDSSLSTRILKGSNIVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLP 126
LF+PP E+ DD +L GSNIV+ +A +Q+ + EFVKSS R DCP D P
Sbjct: 67 LFIPPGVEIEELTDD-----MVLPGSNIVIGPFAGHSQIKEVEFVKSSARARDCPKDDRP 121
Query: 127 EFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYGYAAA 186
E A++GRSNVGKSSL+N LVR+K++ALTSK PGKTQ INHF +N SWY+VDLPGYG+A
Sbjct: 122 EIAILGRSNVGKSSLINCLVRKKEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKV 181
Query: 187 PRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKC 246
+TDW FTK YFLNR +LV V LLIDAS+P + IDL+ A+WLG+N +PMT VFTKC
Sbjct: 182 SDAAKTDWSAFTKGYFLNRDSLVCVLLLIDASVPPQKIDLDCANWLGRNNVPMTFVFTKC 241
Query: 247 DKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQLRNYW 305
DK K K GKRP+EN+ FQ++I+ F+ PPWI+TSSV+ GRDE+LLHM+QLRNYW
Sbjct: 242 DKMKATK--GKRPDENIKAFQQIIRENFKVHPPWILTSSVSGLGRDELLLHMSQLRNYW 298
>gi|297836256|ref|XP_002886010.1| EMB2001 [Arabidopsis lyrata subsp. lyrata]
gi|297331850|gb|EFH62269.1| EMB2001 [Arabidopsis lyrata subsp. lyrata]
Length = 300
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 142/239 (59%), Positives = 176/239 (73%), Gaps = 9/239 (3%)
Query: 69 LFVPPETEVS--IDDSSLSTRILKGSNIVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLP 126
LF+PP E+ DD +L GSNIV+ +A +Q+ + EFVKSS R DC D P
Sbjct: 67 LFIPPGVEIEELTDD-----MVLPGSNIVIGPFAGHSQIKEVEFVKSSARARDCTKDDRP 121
Query: 127 EFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYGYAAA 186
E A++GRSNVGKSSL+N LVR+K++ALTSK PGKTQ INHF +N SWY+VDLPGYG+A
Sbjct: 122 EIAILGRSNVGKSSLINCLVRKKEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKV 181
Query: 187 PRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKC 246
+TDW FTK YFLNR TLV V LLIDAS+P + IDL+ A+WLG+N + MT VFTKC
Sbjct: 182 SDAAKTDWSAFTKGYFLNRDTLVCVLLLIDASVPPQKIDLDCANWLGRNNVQMTFVFTKC 241
Query: 247 DKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQLRNYW 305
DK K K GKRP+EN+ FQ++I+ F+ PPWI+TSSV+ GRDE+LLHM+QLRNYW
Sbjct: 242 DKMKATK--GKRPDENIKAFQQIIKENFKVHPPWILTSSVSGLGRDELLLHMSQLRNYW 298
>gi|218192390|gb|EEC74817.1| hypothetical protein OsI_10639 [Oryza sativa Indica Group]
Length = 348
Score = 296 bits (759), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 149/267 (55%), Positives = 178/267 (66%), Gaps = 34/267 (12%)
Query: 69 LFVPPETEVSIDDSSLSTRILKGSNIVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEF 128
LF PP V D + + ++ SNIV+ YA D++V +AEFVKSS R DCP D PEF
Sbjct: 78 LFFPPG--VDRDAAVAAEMVIPASNIVVGPYAGDSRVKEAEFVKSSARARDCPKDDRPEF 135
Query: 129 ALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYG------ 182
A++GRSNVGKSSL+N+L+RRK+ ALTSK PGKTQ INHF +N SWYLVDLPGYG
Sbjct: 136 AVLGRSNVGKSSLINALIRRKEAALTSKKPGKTQTINHFLVNKSWYLVDLPGYGMYHNDK 195
Query: 183 ------------------------YAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDAS 218
+AAA + RTDW FTK YFLNR TLV V LL+DAS
Sbjct: 196 IIDGIANGEKQSEKYNFALVFIGLFAAASQSARTDWSSFTKGYFLNRDTLVGVLLLVDAS 255
Query: 219 IPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP 278
IP + ID++ A+WLG+N I +T VFTKCDK KK K G RPEEN+ +FQE I + P
Sbjct: 256 IPPQKIDIDCANWLGRNNIGLTYVFTKCDKSKKGKGG--RPEENIKEFQETISSLYPEPP 313
Query: 279 PWIMTSSVTNQGRDEILLHMAQLRNYW 305
PWIMTSSVT GRD +LLHM+QLRNYW
Sbjct: 314 PWIMTSSVTGLGRDGLLLHMSQLRNYW 340
>gi|326490668|dbj|BAJ90001.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326495488|dbj|BAJ85840.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 307
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/259 (55%), Positives = 177/259 (68%), Gaps = 4/259 (1%)
Query: 47 PIPISHAVEPEPEPHVAISLEKLFVPPETEVSIDDSSLSTRILKGSNIVLSKYARDAQVA 106
P H + EP + LF PP E D ++ ++ GSNIV+ YA DA+V
Sbjct: 48 PARTRHKNSRKAEPPRVPANTALFFPPGVERDADVTA--EMVIPGSNIVVGPYAGDARVK 105
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+AEF+ S DCP D PEFA++GRSNVGKSSL+NSL RRK+ ALTSK PGKTQ INH
Sbjct: 106 EAEFIGCSAHARDCPKDDRPEFAVLGRSNVGKSSLINSLTRRKEAALTSKKPGKTQTINH 165
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
IN SWYLVDLPGYG+AAA + R DW FTK YFLNR +LV V LL+DAS+P + IDL
Sbjct: 166 HLINKSWYLVDLPGYGFAAASKTARMDWSSFTKGYFLNRDSLVGVLLLVDASVPTQQIDL 225
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSV 286
+ A+WLG+N + +T VFTKCDK KK K G RP+EN+ +F E I + PPWIMTSS
Sbjct: 226 DCANWLGRNNVGLTFVFTKCDKVKKGKGG--RPDENIKEFLENIGSLYPRPPPWIMTSST 283
Query: 287 TNQGRDEILLHMAQLRNYW 305
T GR+ +LLHM+QLRNYW
Sbjct: 284 TGLGREGLLLHMSQLRNYW 302
>gi|20330773|gb|AAM19136.1|AC103891_16 Putative nucleotide binding protein [Oryza sativa Japonica Group]
gi|27311248|gb|AAO00694.1| Putative nucleotide binding protein [Oryza sativa Japonica Group]
gi|125585504|gb|EAZ26168.1| hypothetical protein OsJ_10034 [Oryza sativa Japonica Group]
Length = 255
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 143/248 (57%), Positives = 170/248 (68%), Gaps = 32/248 (12%)
Query: 88 ILKGSNIVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVR 147
++ SNIV+ YA D++V +AEFVKSS R DCP D PEFA++GRSNVGKSSL+N+L+R
Sbjct: 2 VIPASNIVVGPYAGDSRVKEAEFVKSSARARDCPKDDRPEFAVLGRSNVGKSSLINALIR 61
Query: 148 RKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYG------------------------- 182
RK+ ALTSK PGKTQ INHF +N SWYLVDLPGYG
Sbjct: 62 RKEAALTSKKPGKTQTINHFLVNKSWYLVDLPGYGMYHNDKIIDGIANGEKQSEKYNFAL 121
Query: 183 -----YAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQI 237
+AAA + RTDW FTK YFLNR TLV V LL+DASIP + ID++ A+WLG+N I
Sbjct: 122 VFIGLFAAASQSARTDWSSFTKGYFLNRDTLVGVLLLVDASIPPQKIDIDCANWLGRNNI 181
Query: 238 PMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLH 297
+T VFTKCDK KK K G RPEEN+ +FQE I + PPWIMTSSVT GRD +LLH
Sbjct: 182 GLTYVFTKCDKSKKGKGG--RPEENIKEFQETISSLYPEPPPWIMTSSVTGLGRDGLLLH 239
Query: 298 MAQLRNYW 305
M+QLRNYW
Sbjct: 240 MSQLRNYW 247
>gi|168047724|ref|XP_001776319.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672279|gb|EDQ58818.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 222
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 140/222 (63%), Positives = 175/222 (78%), Gaps = 3/222 (1%)
Query: 89 LKGSNIVLSKYA---RDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSL 145
+ GSNIVL+ A R A V AEF+KSS + +CPS+G PEFALVGRSNVGKSSL+NSL
Sbjct: 1 MPGSNIVLTAGADVGRLALVKSAEFIKSSSKESECPSEGYPEFALVGRSNVGKSSLINSL 60
Query: 146 VRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNR 205
V RK+LA TSK PGKTQ INHF IN WYLVDLPGYG+A AP +RTDW++FTKDYFL R
Sbjct: 61 VLRKELAQTSKKPGKTQLINHFLINKKWYLVDLPGYGFAKAPTAVRTDWNEFTKDYFLQR 120
Query: 206 STLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLND 265
TL V LL+DASI + IDL+ WLG+N+IP+T+VFTKCD++KKKKNGG++P+EN+ D
Sbjct: 121 ETLACVLLLVDASIEPQQIDLDCVDWLGRNKIPVTIVFTKCDRKKKKKNGGRKPQENIED 180
Query: 266 FQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQLRNYWLK 307
F + ++ + PPW+MTSS TNQGR+E+L H+AQLR +W +
Sbjct: 181 FLDRLKPLYDEIPPWVMTSSATNQGREELLRHIAQLRIFWAR 222
>gi|168013946|ref|XP_001759525.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689455|gb|EDQ75827.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 222
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 137/218 (62%), Positives = 173/218 (79%), Gaps = 3/218 (1%)
Query: 91 GSNIVLSKYA---RDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVR 147
GSNIV++ A R A + A+F+KSS + +CP +G PEFALVGRSNVGKSSL+N+LV
Sbjct: 3 GSNIVITAGAEVGRLALIKSADFIKSSSKESECPHEGHPEFALVGRSNVGKSSLINALVH 62
Query: 148 RKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRST 207
RK+LA TSK PGKTQ INH+ IN +WYLVDLPGYGYA AP +RTDW++FTK YFL R T
Sbjct: 63 RKELAQTSKKPGKTQLINHYLINKTWYLVDLPGYGYAKAPTAIRTDWNEFTKGYFLKRQT 122
Query: 208 LVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQ 267
LVSV LL+D+SI + IDL+ WLG+N+IP+T+VFTKCD++KKKKNGG++PEEN+ DF
Sbjct: 123 LVSVLLLVDSSIEPQQIDLDCVGWLGRNKIPVTIVFTKCDRKKKKKNGGRKPEENIKDFL 182
Query: 268 ELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQLRNYW 305
+ I+ + PPWIMTSS TNQG++E+L H+AQLR W
Sbjct: 183 DRIKPLYAETPPWIMTSSETNQGKEELLRHIAQLRILW 220
>gi|224158020|ref|XP_002337923.1| predicted protein [Populus trichocarpa]
gi|222870018|gb|EEF07149.1| predicted protein [Populus trichocarpa]
Length = 206
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/191 (68%), Positives = 150/191 (78%), Gaps = 11/191 (5%)
Query: 1 MLFSQLPRLNFSIFVKPPLSLRSHFTLLPKHRL---NFSALKSTLSTTEPIPISHA---V 54
M SQLP+ + PP +H L +L + LKSTL+TTEPIPI+ A +
Sbjct: 1 MALSQLPKFTYC----PPSLYNTHINLPLLAKLKLPTLTRLKSTLTTTEPIPITEAHNFL 56
Query: 55 EPEPEPHVAISLEKLFVPPETEVSIDDSS-LSTRILKGSNIVLSKYARDAQVAQAEFVKS 113
P+ E SL+KLF+PP+TEVSI+++S LS RILKGSNIVLSKYAR+AQV QAEF+KS
Sbjct: 57 TPQEETQTQFSLDKLFIPPDTEVSINENSGLSARILKGSNIVLSKYARNAQVVQAEFIKS 116
Query: 114 SVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSW 173
SVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSK PGKTQCINHF++NDSW
Sbjct: 117 SVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFKVNDSW 176
Query: 174 YLVDLPGYGYA 184
YLVDLPGYGY
Sbjct: 177 YLVDLPGYGYG 187
>gi|302819613|ref|XP_002991476.1| hypothetical protein SELMODRAFT_133692 [Selaginella moellendorffii]
gi|300140678|gb|EFJ07398.1| hypothetical protein SELMODRAFT_133692 [Selaginella moellendorffii]
Length = 244
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 122/221 (55%), Positives = 155/221 (70%), Gaps = 1/221 (0%)
Query: 86 TRILKGSNIVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSL 145
TR L GSNI + A ++ EF+KSS +DCP DG PE A VGRSNVGKSSL+N L
Sbjct: 22 TRQLFGSNIHVLANASRVKINSVEFIKSSDGIKDCPMDGFPEVAFVGRSNVGKSSLVNLL 81
Query: 146 VRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNR 205
+ RK LAL SK PGKTQ INHF +N WYLVDLPGYG+A+AP+ L W++FTKDYFL R
Sbjct: 82 MERKSLALVSKKPGKTQLINHFLVNKRWYLVDLPGYGFASAPKTLCVKWNEFTKDYFLKR 141
Query: 206 STLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVF-TKCDKRKKKKNGGKRPEENLN 264
TLV V LID+SIP + ID++ A+WL Q+ IP TL F K+KK+K GGK P +N+
Sbjct: 142 KTLVMVVQLIDSSIPVQQIDIDCATWLKQHNIPSTLAFTKCDRKKKKRKTGGKHPVDNVV 201
Query: 265 DFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQLRNYW 305
+F + ++ PWI+TS VT QGRDE+++H+ + RNYW
Sbjct: 202 EFLQEMRLVTTQTYPWILTSCVTGQGRDELMMHIEEFRNYW 242
>gi|302794304|ref|XP_002978916.1| hypothetical protein SELMODRAFT_110012 [Selaginella moellendorffii]
gi|300153234|gb|EFJ19873.1| hypothetical protein SELMODRAFT_110012 [Selaginella moellendorffii]
Length = 244
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 122/221 (55%), Positives = 155/221 (70%), Gaps = 1/221 (0%)
Query: 86 TRILKGSNIVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSL 145
TR L GSNI + A ++ EF+KSS +DCP DG PE A VGRSNVGKSSL+N L
Sbjct: 22 TRQLFGSNIHVLGNASRVKINSVEFIKSSDGIKDCPMDGFPEVAFVGRSNVGKSSLVNLL 81
Query: 146 VRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNR 205
+ RK LAL SK PGKTQ INHF +N WYLVDLPGYG+A+AP+ L W++FTKDYFL R
Sbjct: 82 MERKSLALVSKKPGKTQLINHFLVNKRWYLVDLPGYGFASAPKTLCVKWNEFTKDYFLKR 141
Query: 206 STLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVF-TKCDKRKKKKNGGKRPEENLN 264
TLV V LID+SIP + ID++ A+WL Q+ IP TL F K+KK+K GGK P +N+
Sbjct: 142 KTLVMVVQLIDSSIPVQQIDIDCATWLKQHNIPSTLAFTKCDRKKKKRKTGGKHPVDNVV 201
Query: 265 DFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQLRNYW 305
+F + ++ PWI+TS VT QGRDE+++H+ + RNYW
Sbjct: 202 EFLQQMRLVTTQTYPWILTSCVTGQGRDELMMHIEEFRNYW 242
>gi|307111038|gb|EFN59273.1| hypothetical protein CHLNCDRAFT_17068, partial [Chlorella
variabilis]
Length = 205
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/203 (52%), Positives = 143/203 (70%), Gaps = 4/203 (1%)
Query: 101 RDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGK 160
R +V AEFVKSS E CP PEFA++GRSNVGKSSL+N L R LA+ SKTPGK
Sbjct: 1 RGVRVKSAEFVKSSTSVEQCPPARYPEFAVIGRSNVGKSSLINMLTGRNALAMVSKTPGK 60
Query: 161 TQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIP 220
T+ INHF IN +W+LVDLPGYGYA A + +W++FT++YF+ R TLV+V LL+D+SIP
Sbjct: 61 TRLINHFLINGAWFLVDLPGYGYARASKGSVVEWNRFTREYFVERETLVTVLLLVDSSIP 120
Query: 221 AKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF-FQTAPP 279
P+D+ A+W + IP T+VFTK DKRKK G ++N+ F+++ G+ APP
Sbjct: 121 PMPLDISCAAWFAEAGIPFTVVFTKLDKRKK---GASPSDDNIAAFEQVWLGWACGYAPP 177
Query: 280 WIMTSSVTNQGRDEILLHMAQLR 302
++TSS + +GR E+L H+AQLR
Sbjct: 178 TVLTSSKSGKGRSELLAHVAQLR 200
>gi|384245126|gb|EIE18621.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 311
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 119/253 (47%), Positives = 154/253 (60%), Gaps = 4/253 (1%)
Query: 50 ISHAVEPEPEPHVAISLEKLFVPPE-TEVSIDDSSLSTRILKGSNIVLSKYARDAQVAQA 108
+ AV+ +P ++ E + E + S ++S S R+ + A++ +V +A
Sbjct: 61 VREAVQAQPSSTSSMESEDAWFNDEPQQRSSGETSTSGRVESDLEFLELPKAQNVRVKKA 120
Query: 109 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFR 168
EFVKSS CP LPEFA++GRSNVGKSSL+N L + LA SKTPGKT INHF
Sbjct: 121 EFVKSSTNMAQCPKSKLPEFAVIGRSNVGKSSLINMLTGQAALAKVSKTPGKTIYINHFL 180
Query: 169 INDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEY 228
IND+WYLVDLPGYGYA + R +W FTK+YFL R TL +V LL+DAS+P + DLE
Sbjct: 181 INDNWYLVDLPGYGYAQRSKASRLEWSSFTKEYFLKRETLANVLLLVDASVPVQQADLEC 240
Query: 229 ASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTN 288
ASWL Q+P +LVFTK DKRKKK P EN+ FQ + F+ P T S T
Sbjct: 241 ASWLADAQVPFSLVFTKTDKRKKK---CPSPRENMQTFQAALLKEFENLPLIFETDSETL 297
Query: 289 QGRDEILLHMAQL 301
+G E+L H+A L
Sbjct: 298 KGHKELLSHVAGL 310
>gi|145356924|ref|XP_001422673.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582916|gb|ABP00990.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 253
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/213 (49%), Positives = 142/213 (66%), Gaps = 6/213 (2%)
Query: 100 ARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPG 159
R A V EFV++ V CP LPE A++GRSNVGKSSL+N L RK LA TSK PG
Sbjct: 4 GRGANVKSCEFVQACVDLAGCPKPTLPEIAVIGRSNVGKSSLVNMLTNRKSLAKTSKNPG 63
Query: 160 KTQCINHFRI---NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLID 216
KTQ INH+R+ + +YLVDLPGYGYA AP +LR W FT++Y + R +L++V LLID
Sbjct: 64 KTQTINHYRMTTGDGKFYLVDLPGYGYANAPEDLREKWAAFTREYLIKRESLITVLLLID 123
Query: 217 ASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKR--PEENLNDFQELIQGFF 274
+++ + +DLE WLG+ +P+T+VFTK DKR KK GKR P EN+ +F + ++
Sbjct: 124 STVKPQRLDLECLDWLGEAGVPVTVVFTKVDKR-KKVGAGKRANPAENVEEFCREVSEYW 182
Query: 275 QTAPPWIMTSSVTNQGRDEILLHMAQLRNYWLK 307
PP + TSSV +G+ E+L H+A LR ++ K
Sbjct: 183 DELPPMLYTSSVNGEGKREVLNHIATLRQFFKK 215
>gi|302853147|ref|XP_002958090.1| hypothetical protein VOLCADRAFT_69046 [Volvox carteri f.
nagariensis]
gi|300256558|gb|EFJ40821.1| hypothetical protein VOLCADRAFT_69046 [Volvox carteri f.
nagariensis]
Length = 214
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/201 (50%), Positives = 136/201 (67%), Gaps = 3/201 (1%)
Query: 102 DAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
++ + A F+KSS R DCP D LPEFAL+GRSNVGKSSL+NSL R KLA SK PGK
Sbjct: 10 NSNIRNAAFIKSSTRVADCPPDKLPEFALIGRSNVGKSSLINSLTRNDKLAKVSKEPGKH 69
Query: 162 QCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
INH+ INDSWYLVDLPGYG+A A + + +W KFTKDYF+ R LVSV LL+D+S+P
Sbjct: 70 HLINHYLINDSWYLVDLPGYGFAKAGKSSKEEWLKFTKDYFIERENLVSVLLLVDSSVPP 129
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
+ +D + A+WL + ++P +VFTK D RK+ +N+ F++L+ ++ P
Sbjct: 130 QEVDKDCANWLAECEVPFCIVFTKIDNRKRDMPPNA---QNIRAFKQLMAEEWEELPRCF 186
Query: 282 MTSSVTNQGRDEILLHMAQLR 302
TSS T GR ++L ++A LR
Sbjct: 187 ETSSRTGAGRSDLLGYVASLR 207
>gi|302843904|ref|XP_002953493.1| hypothetical protein VOLCADRAFT_82197 [Volvox carteri f.
nagariensis]
gi|300261252|gb|EFJ45466.1| hypothetical protein VOLCADRAFT_82197 [Volvox carteri f.
nagariensis]
Length = 295
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/201 (50%), Positives = 134/201 (66%), Gaps = 1/201 (0%)
Query: 102 DAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
+ +V AE+++S V DCP+ PEFA++GRSNVGKSSL+N L RK LAL SK PGKT
Sbjct: 79 NVKVKTAEYLQSCVTVSDCPTPRFPEFAVIGRSNVGKSSLINMLTGRKDLALVSKQPGKT 138
Query: 162 QCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
+CINHF IN SWY VDLPGYG+A + R +D FT++YF R L VFLL+DASIP
Sbjct: 139 KCINHFLINGSWYFVDLPGYGFAKVGVQGRQQFDTFTREYFKTRPNLAMVFLLVDASIPP 198
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
+ IDLEYA+WL N++P TLVFTK DKR+K + + ++ F+ + PP +
Sbjct: 199 QKIDLEYANWLTDNEVPFTLVFTKVDKRRKGVSSSA-CDSHVTAFKRALLQDLAFLPPSV 257
Query: 282 MTSSVTNQGRDEILLHMAQLR 302
+TS GR E+L +A+LR
Sbjct: 258 LTSCAKGLGRGEMLNFIARLR 278
>gi|255087758|ref|XP_002505802.1| predicted protein [Micromonas sp. RCC299]
gi|226521072|gb|ACO67060.1| predicted protein [Micromonas sp. RCC299]
Length = 531
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/235 (45%), Positives = 148/235 (62%), Gaps = 4/235 (1%)
Query: 75 TEVSIDDSSLSTRILKGSNIVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRS 134
E I+D T G + A+ A V F+++ VR +DCP PE A++GRS
Sbjct: 271 AEEDIEDDLYLTDEADGLTQATVQQAKGAIVKSVRFMQACVRVKDCPPPKHPEVAVIGRS 330
Query: 135 NVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI---NDSWYLVDLPGYGYAAAPRELR 191
NVGKSSL+N L RK +A TSK PGKT+ INHF + + +WY VDLPGYG+A AP E R
Sbjct: 331 NVGKSSLVNMLTNRKDIAKTSKNPGKTRTINHFEMITGDGTWYFVDLPGYGFANAPEEAR 390
Query: 192 TDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKK 251
W +FT++Y L R L+SV LLID+++ + +DLE +LG+N IP+T+VFTK DK++K
Sbjct: 391 RKWAEFTREYLLGRPNLLSVMLLIDSTVKPQRLDLECLEFLGENNIPVTVVFTKVDKKRK 450
Query: 252 KKNGGK-RPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQLRNYW 305
K+G + PEEN+ F + ++ PP I TSS T G+ +L H+A LR ++
Sbjct: 451 VKSGKRANPEENVEAFCREVSEYWDELPPMIFTSSKTGDGKQAVLNHVATLRQFF 505
>gi|303289114|ref|XP_003063845.1| hypothetical protein MICPUCDRAFT_53567 [Micromonas pusilla
CCMP1545]
gi|226454913|gb|EEH52218.1| hypothetical protein MICPUCDRAFT_53567 [Micromonas pusilla
CCMP1545]
Length = 526
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 145/213 (68%), Gaps = 4/213 (1%)
Query: 97 SKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSK 156
++ + A V A+++++ VR +DCP PE A++GRSNVGKSSL+N L RK +A TSK
Sbjct: 306 AQQEKGASVKSAKYLQTCVRVQDCPPPNFPEIAVIGRSNVGKSSLVNLLTGRKDVAKTSK 365
Query: 157 TPGKTQCINHFRI---NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFL 213
PGKTQ INHF + + WYLVDLPGYG+A AP LR W FT++Y L R L++V L
Sbjct: 366 NPGKTQTINHFEMITGDGKWYLVDLPGYGFANAPERLRKKWALFTREYLLERENLLAVML 425
Query: 214 LIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGK-RPEENLNDFQELIQG 272
LID+++ + +DLE +LG+N IP+++VFTK DK++K K+G + +PEEN+ F +
Sbjct: 426 LIDSTVEPQRLDLECLEFLGENDIPVSIVFTKVDKKRKVKSGKRAKPEENVEAFCREVSE 485
Query: 273 FFQTAPPWIMTSSVTNQGRDEILLHMAQLRNYW 305
+++ PP I TSS T G+ +L H+A LR ++
Sbjct: 486 YWEEMPPMIFTSSKTGDGKAALLNHVATLRQFF 518
>gi|388496914|gb|AFK36523.1| unknown [Medicago truncatula]
Length = 183
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/146 (71%), Positives = 121/146 (82%), Gaps = 8/146 (5%)
Query: 39 KSTLSTTEPIPISHAVEPEPEPHVAISLEKLFVPPETEVSIDDSSLSTRILKGSNIVLSK 98
KS+L+T+EP + + P+ EP +SLEKLF+PP T V+ +++ RIL GSNI+LS
Sbjct: 40 KSSLTTSEP-NLEPIITPKTEP---LSLEKLFIPPNTHVTHENA----RILNGSNILLSN 91
Query: 99 YARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTP 158
YA DAQ+ QA+FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNS+VRRKKLALTSK P
Sbjct: 92 YANDAQIIQADFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSIVRRKKLALTSKKP 151
Query: 159 GKTQCINHFRINDSWYLVDLPGYGYA 184
GKTQ INHFR+NDSWYLVDLPGYG
Sbjct: 152 GKTQLINHFRVNDSWYLVDLPGYGVC 177
>gi|159477825|ref|XP_001697009.1| hypothetical protein CHLREDRAFT_150723 [Chlamydomonas reinhardtii]
gi|158274921|gb|EDP00701.1| predicted protein [Chlamydomonas reinhardtii]
Length = 276
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 132/199 (66%), Gaps = 1/199 (0%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V AE+++S V DCP PEFA++GRSNVGKSSL+N + RK LAL SK PGKT+C
Sbjct: 62 KVKAAEYMQSCVTVADCPPPRYPEFAVIGRSNVGKSSLINMITGRKDLALVSKEPGKTKC 121
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN++WYLVDLPGYG+A + R +D FTK+YF R L V LL+DASI +
Sbjct: 122 INHFIINENWYLVDLPGYGFAKVGFQGRQQFDTFTKEYFNTRPNLAMVLLLVDASIKPQR 181
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLEYA+WL N++P T+VFTK DKR+K R + ++ F+ + PP ++T
Sbjct: 182 IDLEYANWLTDNEVPFTIVFTKADKRRKGLTAAVR-DSHVTAFKRALLQDLAYLPPSLLT 240
Query: 284 SSVTNQGRDEILLHMAQLR 302
S+ GR E+L +A LR
Sbjct: 241 SAAKGLGRGELLSFIAGLR 259
>gi|412985399|emb|CCO18845.1| ribosome biogenesis GTP-binding protein YsxC [Bathycoccus prasinos]
Length = 352
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 144/213 (67%), Gaps = 4/213 (1%)
Query: 96 LSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTS 155
L+K A+ A + +F+ S VR +DCP LPE A +GRSNVGKSSL+N L RK +A S
Sbjct: 120 LAKQAKAATIKSVKFISSVVRHQDCPQTKLPEVAFIGRSNVGKSSLVNMLTNRKNVAKVS 179
Query: 156 KTPGKTQCINHFRI---NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVF 212
K PGKTQ INH+ I + W+LVDLPGYG+A AP L+ +W KFT++Y L R L+SV
Sbjct: 180 KNPGKTQTINHYEITTGDGKWFLVDLPGYGFANAPEHLKKEWAKFTREYLLERKNLISVM 239
Query: 213 LLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKR-PEENLNDFQELIQ 271
LL+D+++ + +DL+ +L +N IP T+VFTK DK++K K G + P E+++ F + I
Sbjct: 240 LLVDSTVKPQQLDLDALEFLAENDIPATVVFTKADKKRKAKGGKRATPAEHVDMFADEIS 299
Query: 272 GFFQTAPPWIMTSSVTNQGRDEILLHMAQLRNY 304
F+ PP++ TS+ + +G+ E+L H+A +R +
Sbjct: 300 EMFEELPPFVFTSANSGEGKKELLNHIATIREF 332
>gi|305664545|ref|YP_003860832.1| putative GTP-binding protein [Maribacter sp. HTCC2170]
gi|88708562|gb|EAR00798.1| putative GTP-binding protein [Maribacter sp. HTCC2170]
Length = 203
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 136/206 (66%), Gaps = 6/206 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A+FV S+ CP++ LPE+A +GRSNVGKSSL+N L RK LA TS PGKTQ
Sbjct: 2 KIKSADFVMSNSDVAKCPNEPLPEYAFIGRSNVGKSSLINMLTERKSLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF+IN +W+LVDLPGYGYA ++ + + K+ DYF+ R LVS F+L+D +
Sbjct: 62 INHFKINGNWFLVDLPGYGYARVSKKDKRTFQKYITDYFIKRKQLVSAFVLVDIRHEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDF-QELIQGFFQTAPPWIM 282
+D+E+ +LG+N IP +++FTK DK K K+ E N+N + +EL+ G ++ AP + +
Sbjct: 122 VDMEFMEYLGENMIPFSIIFTKADKLKP-----KQMEANVNSYVKELLNGVWEEAPNYFV 176
Query: 283 TSSVTNQGRDEILLHMAQLRNYWLKH 308
TSS N GRDE+L ++ + + K
Sbjct: 177 TSSSKNMGRDELLHYIESINQEFFKE 202
>gi|159477681|ref|XP_001696937.1| hypothetical protein CHLREDRAFT_105231 [Chlamydomonas reinhardtii]
gi|158274849|gb|EDP00629.1| predicted protein [Chlamydomonas reinhardtii]
Length = 214
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 134/208 (64%), Gaps = 10/208 (4%)
Query: 102 DAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
++ V ++ F+KSS R DCP D +PEFA +GRSNVGKSSL+NSL +LA SK PG T
Sbjct: 1 NSNVKKSAFIKSSTRVADCPPDRIPEFAFIGRSNVGKSSLINSLTNNDRLAKVSKEPGMT 60
Query: 162 QCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
+ INH+ INDSWYLVDLPGYG+A A + R +W +FTKDYF+ R LVSV LL+D+S+P
Sbjct: 61 KLINHYLINDSWYLVDLPGYGFAKAGKSNREEWLRFTKDYFITRDNLVSVMLLVDSSLPP 120
Query: 222 -------KPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFF 274
+ +D + A WL + ++P +VFTK D RKK N+ F++++ +
Sbjct: 121 QASGPGWRTVDRDCADWLAECEVPFCIVFTKIDNRKKDMPTN---AANVKAFKQMMAEEW 177
Query: 275 QTAPPWIMTSSVTNQGRDEILLHMAQLR 302
+ P TSS T G+ E+L ++A LR
Sbjct: 178 EALPRCFETSSKTGTGKSELLGYLASLR 205
>gi|340616807|ref|YP_004735260.1| GTP-binding protein EngB [Zobellia galactanivorans]
gi|339731604|emb|CAZ94869.1| GTP-binding protein EngB [Zobellia galactanivorans]
Length = 205
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/193 (48%), Positives = 126/193 (65%), Gaps = 6/193 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+ A FV S+ CP++ LPE+A +GRSNVGKSSL+NSL RK LA TS PGKTQ
Sbjct: 2 NIKSANFVISNTDVAKCPNEPLPEYAFIGRSNVGKSSLINSLTERKSLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF+IN +W+LVDLPGYGYA ++ + + K+ DYF+ R LV F+L+D +
Sbjct: 62 INHFKINGNWFLVDLPGYGYARVSKKSKNTFQKYITDYFIKREQLVCAFVLVDIRHEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDF-QELIQGFFQTAPPWIM 282
ID+E+ WLG+N IP ++FTK DK K K EEN+N + EL+ G ++ AP + +
Sbjct: 122 IDMEFMEWLGENNIPFCIIFTKADKLKPKA-----IEENVNKYISELLNGVWEEAPSYFI 176
Query: 283 TSSVTNQGRDEIL 295
TSS GRD++L
Sbjct: 177 TSSSKGYGRDDVL 189
>gi|429741972|ref|ZP_19275619.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas
catoniae F0037]
gi|429157613|gb|EKY00194.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas
catoniae F0037]
Length = 198
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 128/199 (64%), Gaps = 5/199 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ AEFV S+ R E CP+ GLPE+A +GRSNVGKSSL+N L RK LA+TS+ PGKTQ I
Sbjct: 3 IKSAEFVVSNSRVEKCPTTGLPEYAFIGRSNVGKSSLINMLTGRKGLAMTSQKPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN W+LVDLPGYGYA ++ R + +DY L R LV +F+L+DA + + I
Sbjct: 63 NHFIINKEWHLVDLPGYGYARLSKDGRDGLRRMIEDYVLERRELVCLFVLLDARLEPQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DLE+ WLG+ +P LVFTK DK K K N++ ++E + ++ PP +TS
Sbjct: 123 DLEFIEWLGEESVPFALVFTKADKLSKGKLSA-----NISAYKERLLEGWEELPPLFITS 177
Query: 285 SVTNQGRDEILLHMAQLRN 303
S GRDE+L ++ + N
Sbjct: 178 SEARTGRDELLDYIEGINN 196
>gi|303291125|ref|XP_003064849.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453875|gb|EEH51183.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 196
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 129/199 (64%), Gaps = 4/199 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPS-DGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
++ + +FV ++ +DCP+ DGLPE AL+GRSNVGKSSLLN L AL S PG TQ
Sbjct: 1 KMRKVQFVSATEDADDCPAPDGLPEVALIGRSNVGKSSLLNLLTEGASGALVSSKPGTTQ 60
Query: 163 CINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAK 222
INH+ +N W++VDLPGYGYA A + W+ FTKDYF+ RS L V LLIDAS+P +
Sbjct: 61 RINHYLVNHKWWIVDLPGYGYAEATEDETAKWEAFTKDYFVTRSNLAGVLLLIDASVPPQ 120
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D EYA WL +N +P T+VFTKCD+ K G EEN +F+ ++ + +P I
Sbjct: 121 AKDAEYADWLIENNVPFTIVFTKCDRDKP---GMPSVEENKAEFEARLEERWHRSPSMIP 177
Query: 283 TSSVTNQGRDEILLHMAQL 301
TSSV GR+++L ++ +
Sbjct: 178 TSSVNADGREDVLKFISSI 196
>gi|402847326|ref|ZP_10895621.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas sp.
oral taxon 279 str. F0450]
gi|402266639|gb|EJU16060.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas sp.
oral taxon 279 str. F0450]
Length = 198
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/197 (47%), Positives = 126/197 (63%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ AEFV S+ R E CP+ GLPE+A +GRSNVGKSSL+N L RK LA+TS+ PGKTQ I
Sbjct: 3 IKSAEFVISNSRVEKCPTTGLPEYAFIGRSNVGKSSLINMLTARKGLAMTSQKPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IND+WYLVDLPGYGYA ++ R + +DY L R LV +F+L+D + I
Sbjct: 63 NHFIINDAWYLVDLPGYGYARLGKDSRDSLRRMIEDYILERKELVLLFVLLDCRHEPQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DLE+ WLG+ +P LVFTK DK K R N+ ++ + ++ PP +TS
Sbjct: 123 DLEFIQWLGEEGVPFALVFTKADKLSK-----GRLAANVEAYKAKLHEEWEELPPIFVTS 177
Query: 285 SVTNQGRDEILLHMAQL 301
S GRDE+L ++ ++
Sbjct: 178 SEERMGRDELLGYIEEI 194
>gi|149278824|ref|ZP_01884959.1| GTPase EngB [Pedobacter sp. BAL39]
gi|149230443|gb|EDM35827.1| GTPase EngB [Pedobacter sp. BAL39]
Length = 209
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 126/191 (65%), Gaps = 5/191 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ A F+ S+ + P +PE+A +GRSNVGKSSL+N LV + LA TS+ PGKTQ I
Sbjct: 3 IKSATFICSNTKVSALPVANMPEYAFIGRSNVGKSSLINMLVNQHGLAKTSQRPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN+ WY+VDLPGYGYA + R W+KF ++Y R +L VF+LID+ + + I
Sbjct: 63 NHFLINEKWYIVDLPGYGYAKVSKNSREKWEKFIRNYITKRESLQCVFVLIDSRLEPQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DLE+ W+G+ QIP L+FTK DK+ K K ++N+ F++ + G+F+ PP+ +TS
Sbjct: 123 DLEFCCWMGEIQIPFALIFTKADKQSKVKT-----DQNVAAFKKALGGWFEEIPPYFVTS 177
Query: 285 SVTNQGRDEIL 295
+ GRDE+L
Sbjct: 178 AEKALGRDEVL 188
>gi|319953730|ref|YP_004164997.1| gtp-binding protein engb [Cellulophaga algicola DSM 14237]
gi|319422390|gb|ADV49499.1| GTP-binding protein engB [Cellulophaga algicola DSM 14237]
Length = 208
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 128/196 (65%), Gaps = 6/196 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V AEFV S+ +CP + +PE+A +GRSNVGKSSL+N L +K LA TS PGKTQ
Sbjct: 2 KVKSAEFVMSNSNVTNCPKEAIPEYAFIGRSNVGKSSLINMLTDKKSLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF+INDSWYLVDLPGYGYA + + + ++ DYF R LVS F+L+D +
Sbjct: 62 INHFKINDSWYLVDLPGYGYARVSKRDKKTFQRYITDYFRERKQLVSAFVLVDIRHEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDF-QELIQGFFQTAPPWIM 282
+DLE+ W+G+NQIP ++VFTK DK K E N+ + L++ +Q AP + +
Sbjct: 122 VDLEFLEWMGENQIPFSIVFTKADKLKP-----NVIERNVQTYIDHLLESMWQEAPNYFI 176
Query: 283 TSSVTNQGRDEILLHM 298
TS+ N G+DE+L ++
Sbjct: 177 TSASKNIGQDEVLDYI 192
>gi|414880638|tpg|DAA57769.1| TPA: hypothetical protein ZEAMMB73_007341 [Zea mays]
Length = 187
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 93/129 (72%), Positives = 106/129 (82%), Gaps = 2/129 (1%)
Query: 56 PEPEPHVAISLEKLFVPPETEVSIDDS-SLSTRILKGSNIVLSKYAR-DAQVAQAEFVKS 113
P+ E + + L+ LFVPP + D ++S R+LKGSNIVL YAR DAQV A+FVKS
Sbjct: 59 PQGEGQIKLPLDHLFVPPGATMDAGDQEAVSARVLKGSNIVLGPYARGDAQVVNADFVKS 118
Query: 114 SVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSW 173
SVR +DCP DGLPEFALVGRSNVGKSSLLNSLVRRK+LALTSK PGKTQCINHF++NDSW
Sbjct: 119 SVRPDDCPRDGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFKVNDSW 178
Query: 174 YLVDLPGYG 182
YLVDLPGYG
Sbjct: 179 YLVDLPGYG 187
>gi|218261711|ref|ZP_03476446.1| hypothetical protein PRABACTJOHN_02114 [Parabacteroides johnsonii
DSM 18315]
gi|218223845|gb|EEC96495.1| hypothetical protein PRABACTJOHN_02114 [Parabacteroides johnsonii
DSM 18315]
Length = 198
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 92/198 (46%), Positives = 129/198 (65%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP+ LPE+A +GRSNVGKSSL+N L +K LA+TS+ PGKT
Sbjct: 2 EIKSAEFVISNTNVKKCPAGNLPEYAFIGRSNVGKSSLINMLTGKKGLAMTSQKPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN WYLVDLPGYG+A +E R + + +DY L R L ++F+LID +
Sbjct: 62 INHFLINGQWYLVDLPGYGFAQRGKEGRENIQRIIEDYILEREQLTNLFVLIDCRHEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP +L+FTK DK K R +ENL +Q + ++ PP +++
Sbjct: 122 IDLEFMEWLGENGIPFSLIFTKIDKISK-----GRLQENLKAYQTKLLESWEELPPILLS 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS +GRDEIL ++ ++
Sbjct: 177 SSEKKEGRDEILDYIDEI 194
>gi|423345682|ref|ZP_17323371.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
merdae CL03T12C32]
gi|409221417|gb|EKN14366.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
merdae CL03T12C32]
Length = 198
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 92/198 (46%), Positives = 130/198 (65%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP+ LPE+A +GRSNVGKSSL+N L +K LA+TS+ PGKT
Sbjct: 2 EIKSAEFVISNTNVKKCPTGDLPEYAFIGRSNVGKSSLINMLTGKKGLAMTSQKPGKTLL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN WYLVDLPGYG+A +E R + + +DY L R L ++F+LID +
Sbjct: 62 INHFLINGQWYLVDLPGYGFAQRGKEGRENIQRIIEDYILEREQLTNLFVLIDCRHEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N+IP +L+FTK DK K R +ENL +Q + ++ PP +++
Sbjct: 122 IDLEFMEWLGENEIPFSLIFTKIDKISK-----GRLQENLKVYQTKLLESWEELPPILLS 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS +GRDEIL ++ ++
Sbjct: 177 SSEKKEGRDEILNYIDEI 194
>gi|333030034|ref|ZP_08458095.1| GTP-binding protein engB [Bacteroides coprosuis DSM 18011]
gi|332740631|gb|EGJ71113.1| GTP-binding protein engB [Bacteroides coprosuis DSM 18011]
Length = 200
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 127/198 (64%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+ A FV S+ + CP+DGLPE+A +GRSNVGKSSL+N L RK LA+TS PGKT
Sbjct: 2 HINSANFVISNTEVKKCPTDGLPEYAFIGRSNVGKSSLINMLTNRKGLAMTSAKPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN+ WY+VDLPGYGYA ++ + +DY L R+ + ++F+LID + +
Sbjct: 62 INHFLINEEWYIVDLPGYGYAKRNQKGQQQIKTIIEDYILERTAMTNLFVLIDCRLSPQQ 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP ++VFTK DK K K + N+ F ++ ++ PP+ +T
Sbjct: 122 IDLEFIEWLGENNIPFSIVFTKGDKLTKNK-----LDSNVEAFLNELKKQWEELPPYFIT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GRDE+L ++ Q+
Sbjct: 177 SSEKRMGRDEMLNYIEQI 194
>gi|408370285|ref|ZP_11168063.1| putative GTP-binding protein [Galbibacter sp. ck-I2-15]
gi|407744363|gb|EKF55932.1| putative GTP-binding protein [Galbibacter sp. ck-I2-15]
Length = 201
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/199 (46%), Positives = 127/199 (63%), Gaps = 6/199 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
Q+ A FV S+ CP++ LPE+A +GRSNVGKSSL+N L RK LA TS PGKTQ
Sbjct: 2 QIKSATFVISNTDVSRCPNEPLPEYAFIGRSNVGKSSLINMLTERKSLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF+IN +W+LVDLPGYGYA + ++ + KF YF R LVS F+LID +
Sbjct: 62 INHFKINGNWFLVDLPGYGYARVSKTAKSKFQKFITSYFSQRKQLVSAFILIDIRHSPQA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDF-QELIQGFFQTAPPWIM 282
ID+E+ WLG+NQIP ++VFTK DK K K E N+ + Q ++ ++ P + +
Sbjct: 122 IDMEFMQWLGENQIPFSIVFTKADKLKPKA-----IERNIQAYLQAMLDDLWEETPNYFV 176
Query: 283 TSSVTNQGRDEILLHMAQL 301
TSS GR+E+L ++ Q+
Sbjct: 177 TSSSNGTGREELLDYIDQI 195
>gi|326802551|ref|YP_004320370.1| GTP-binding protein engB [Sphingobacterium sp. 21]
gi|326553315|gb|ADZ81700.1| GTP-binding protein engB [Sphingobacterium sp. 21]
Length = 206
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 126/191 (65%), Gaps = 5/191 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ AEFV S+ R + P +PE+A +GRSNVGKSSL+N+L + K LA TS+TPGKTQ I
Sbjct: 9 IKSAEFVCSNTRIDKLPPPTIPEYAFIGRSNVGKSSLINALTQHKGLAKTSQTPGKTQLI 68
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF +N W+LVDLPGYGYA + R++W+KF K Y NR L VF+LID+ + +
Sbjct: 69 NHFLVNKEWFLVDLPGYGYAKTSKTNRSEWEKFIKKYLFNRENLQCVFVLIDSRLTPQKN 128
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DL++ LG+ IP L+FTK DK+ K K+ E N+ F++ + +F+ PP I+TS
Sbjct: 129 DLDFCCLLGEKGIPFILIFTKADKQSKIKS-----EHNIELFRKALLTWFEEVPPHILTS 183
Query: 285 SVTNQGRDEIL 295
S T G DE+L
Sbjct: 184 SETRNGCDEVL 194
>gi|327404186|ref|YP_004345024.1| GTP-binding protein engB [Fluviicola taffensis DSM 16823]
gi|327319694|gb|AEA44186.1| GTP-binding protein engB [Fluviicola taffensis DSM 16823]
Length = 204
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 132/201 (65%), Gaps = 5/201 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +A+F+ S+ + CP+DG PE+A +GRSNVGKSSL+N LV +K +A TS PGKTQ I
Sbjct: 3 IKEAKFIISNTDIKLCPTDGKPEYAFIGRSNVGKSSLINMLVEKKDMAKTSGRPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN+ WYLVDLPGYGYA A + R W+KF + R TL++ F+LID+ + + I
Sbjct: 63 NHFLINNEWYLVDLPGYGYAKASKSSRNQWEKFISQFLTRRETLINTFVLIDSRLEPQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D+E+ SW + Q+P ++VFTK DK ++NL +++ + +++ PP TS
Sbjct: 123 DIEFMSWCAEEQLPFSIVFTKIDKL-----SSSALQKNLAAYKKEMLKYWEALPPVFTTS 177
Query: 285 SVTNQGRDEILLHMAQLRNYW 305
S ++ GR++IL ++ Q+ W
Sbjct: 178 SESHFGREKILNYIDQINLDW 198
>gi|86140633|ref|ZP_01059192.1| GTP-binding protein [Leeuwenhoekiella blandensis MED217]
gi|85832575|gb|EAQ51024.1| GTP-binding protein [Leeuwenhoekiella blandensis MED217]
Length = 202
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 131/204 (64%), Gaps = 10/204 (4%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+ AEF+ S+ CP + +PE+A +GRSNVGKSSL+N L RK LA TS PGKTQ
Sbjct: 2 HIKSAEFLVSNSNVAKCPKNKMPEYAFIGRSNVGKSSLINMLTDRKNLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +WYLVDLPGYGYA ++++ ++ KF YF R LVS F+LID +P
Sbjct: 62 INHFVINQTWYLVDLPGYGYARVSKKVKKEFQKFITQYFEEREQLVSAFVLIDCRHEPQP 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDF-QELIQGFFQTAPPWIM 282
ID E+ +LG+ QIP +++FTK DK K K E N+ ++ QEL+ G + P + +
Sbjct: 122 IDREFMQYLGEKQIPFSIIFTKADKLKPKA-----LERNIENYKQELLAGAWAEMPNYFI 176
Query: 283 TSSVTNQGRDEILLHM----AQLR 302
+S+ + G+DEIL ++ AQL+
Sbjct: 177 SSATNSTGKDEILDYIDAINAQLK 200
>gi|326335701|ref|ZP_08201887.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 338 str. F0234]
gi|325692130|gb|EGD34083.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 338 str. F0234]
Length = 200
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 125/200 (62%), Gaps = 5/200 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ QA FV S+ + CP+ GL E+A +GRSNVGKSSL+N L K LA TS PGKTQ
Sbjct: 2 EIRQASFVMSNTQIAKCPAHGLAEYAFIGRSNVGKSSLINMLTNHKGLAKTSSKPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +WYLVDLPGYGYA ++ + + +F DYF R LV F+L+D +
Sbjct: 62 INHFLINKNWYLVDLPGYGYAQVSKQSKRVFQQFITDYFKKRKELVCAFVLVDIRHKPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP ++FTK DK K EE++ +Q ++ ++ PP+ ++
Sbjct: 122 IDLEFMQWLGENTIPFAIIFTKADKLTD-----KLIEEHITAYQGILLEQWEEMPPYFIS 176
Query: 284 SSVTNQGRDEILLHMAQLRN 303
SSV GR EIL ++ + N
Sbjct: 177 SSVNKLGRTEILNYIEDINN 196
>gi|154492901|ref|ZP_02032527.1| hypothetical protein PARMER_02540 [Parabacteroides merdae ATCC
43184]
gi|423723453|ref|ZP_17697602.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
merdae CL09T00C40]
gi|154087206|gb|EDN86251.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
merdae ATCC 43184]
gi|409241163|gb|EKN33933.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
merdae CL09T00C40]
Length = 198
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 130/198 (65%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP+ LPE+A +GRSNVGKSSL+N L +K LA+TS+ PGKT
Sbjct: 2 EIKSAEFVISNTNVKKCPTGDLPEYAFIGRSNVGKSSLINMLTGKKGLAMTSQKPGKTLL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN WYLVDLPGYG+A +E R + + +DY L R L ++F+LID +
Sbjct: 62 INHFLINGQWYLVDLPGYGFAQRGKEGRENIQRIIEDYILEREQLTNLFVLIDCRHEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N+IP +L+FTK DK K R +ENL +Q + ++ PP +++
Sbjct: 122 IDLEFMEWLGENEIPFSLIFTKIDKISK-----GRLQENLKVYQTKLLESWEELPPILLS 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS +GRD+IL ++ ++
Sbjct: 177 SSEKKEGRDKILNYIDEI 194
>gi|386820085|ref|ZP_10107301.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Joostella marina
DSM 19592]
gi|386425191|gb|EIJ39021.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Joostella marina
DSM 19592]
Length = 202
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 132/199 (66%), Gaps = 6/199 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+ A FV S+ + CP++ LPE+A +GRSNVGKSSL+N L RK LA TS PGKTQ
Sbjct: 2 HIKSATFVMSNSDVKKCPNEPLPEYAFIGRSNVGKSSLINMLTERKSLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF+IN++W+LVDLPGYGYA +++++ + KF YF R LVS F+LID +
Sbjct: 62 INHFKINENWFLVDLPGYGYAKVSKKVKSTFQKFITKYFEERQQLVSAFVLIDIRHDPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQE-LIQGFFQTAPPWIM 282
ID+E+ WLG++QIP +++FTK DK K K E ++ + + LI ++ AP + +
Sbjct: 122 IDMEFMQWLGEHQIPFSIIFTKADKLKPKA-----IERDVKKYLDVLIADVWEEAPNYFI 176
Query: 283 TSSVTNQGRDEILLHMAQL 301
TSS + G+DE+L ++ Q+
Sbjct: 177 TSSTSGTGKDELLEYIDQI 195
>gi|423343472|ref|ZP_17321185.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
johnsonii CL02T12C29]
gi|409215169|gb|EKN08175.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
johnsonii CL02T12C29]
Length = 198
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 129/198 (65%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP+ LPE+A +GRSNVGKSSL+N L +K LA+TS+ PGKT
Sbjct: 2 EIKSAEFVISNTNVKKCPAGNLPEYAFIGRSNVGKSSLINMLTGKKGLAMTSQKPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN WYLVDLPGYG+A +E R + + +DY L R L ++F+LID +
Sbjct: 62 INHFLINGQWYLVDLPGYGFAQRGKEGRENIQRIIEDYILEREQLTNLFVLIDCRHEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG++ IP +L+FTK DK K R +ENL +Q + ++ PP +++
Sbjct: 122 IDLEFMEWLGESGIPFSLIFTKIDKISK-----GRLQENLKAYQTKLLESWEELPPILLS 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS +GRDEIL ++ ++
Sbjct: 177 SSEKKEGRDEILDYIDEI 194
>gi|124005837|ref|ZP_01690675.1| GTP-binding protein [Microscilla marina ATCC 23134]
gi|123988520|gb|EAY28161.1| GTP-binding protein [Microscilla marina ATCC 23134]
Length = 200
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 123/192 (64%), Gaps = 5/192 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V AEF+KSS CP+ PE+A +GRSNVGKSSL+N L RK LA TS+ PGKTQ
Sbjct: 2 EVKSAEFIKSSTDYTQCPAVHQPEYAFIGRSNVGKSSLINKLTNRKSLAKTSQNPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IND W+LVDLPGYGYA A + R W K DY L R L+ +F+LIDA +
Sbjct: 62 INHFLINDRWHLVDLPGYGYAKASKTERKKWGKMINDYILKREVLLGIFVLIDARHEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+ ++P T+VFTK DK + K P+ + +++ I ++ P +T
Sbjct: 122 IDLEFLEWLGEERVPFTMVFTKSDKL----SSNKLPQA-IASYRKAILRTWEEMPTHFVT 176
Query: 284 SSVTNQGRDEIL 295
SSV+ G DEIL
Sbjct: 177 SSVSGLGCDEIL 188
>gi|373111000|ref|ZP_09525261.1| ribosome biogenesis GTP-binding protein YsxC [Myroides odoratimimus
CCUG 10230]
gi|423132332|ref|ZP_17119982.1| ribosome biogenesis GTP-binding protein YsxC [Myroides odoratimimus
CCUG 12901]
gi|423329706|ref|ZP_17307512.1| ribosome biogenesis GTP-binding protein YsxC [Myroides odoratimimus
CCUG 3837]
gi|371639831|gb|EHO05444.1| ribosome biogenesis GTP-binding protein YsxC [Myroides odoratimimus
CCUG 12901]
gi|371641481|gb|EHO07065.1| ribosome biogenesis GTP-binding protein YsxC [Myroides odoratimimus
CCUG 10230]
gi|404602943|gb|EKB02624.1| ribosome biogenesis GTP-binding protein YsxC [Myroides odoratimimus
CCUG 3837]
Length = 206
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 133/199 (66%), Gaps = 6/199 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP++ +PE+A +GRSNVGKSSL+N L +K LA TS PGKTQ
Sbjct: 2 KINTAEFVVSNSDAKKCPNEPIPEYAFIGRSNVGKSSLINMLTNQKYLAKTSSRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF+IN +WYLVDLPGYGYA ++ + + KF DYF NR LVS F+L+D A+
Sbjct: 62 INHFKINSNWYLVDLPGYGYAKVSKKTKAVFQKFITDYFENRQQLVSAFVLVDIRHEAQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDF-QELIQGFFQTAPPWIM 282
IDLE+ +LG+ ++P +++FTK DK K+K G + D+ ++++ ++ PP +
Sbjct: 122 IDLEFMQYLGETEVPFSIIFTKADKVGKQKVAGL-----IADYRKKMLADNWEEMPPCFV 176
Query: 283 TSSVTNQGRDEILLHMAQL 301
TSS GRDE+L ++ ++
Sbjct: 177 TSSEDKTGRDEVLNYIEEI 195
>gi|423316124|ref|ZP_17294029.1| ribosome biogenesis GTP-binding protein YsxC [Bergeyella zoohelcum
ATCC 43767]
gi|405584397|gb|EKB58304.1| ribosome biogenesis GTP-binding protein YsxC [Bergeyella zoohelcum
ATCC 43767]
Length = 206
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 125/191 (65%), Gaps = 5/191 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ A FVKSS R +DCP LPE+A +GRSNVGKSSL+N+++ RK LA TS+TPGKTQ I
Sbjct: 3 IHSANFVKSSGRWQDCPEPTLPEYAFIGRSNVGKSSLINAMMNRKDLAKTSQTPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN++W+L DLPGYGYA + LR D++K +Y LNR LV++F+LID + I
Sbjct: 63 NHFLINENWFLTDLPGYGYAKVSKSLRKDFEKLITNYILNRKNLVNLFVLIDVRHTPQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DLE+ W ++ IP ++VFTK DK K G E+N N + E + + P +TS
Sbjct: 123 DLEFMEWCAESGIPFSIVFTKADKLK-----GMMAEKNANAYLEKMLETWDEVPNHFLTS 177
Query: 285 SVTNQGRDEIL 295
S G +++L
Sbjct: 178 SEKKIGTEDVL 188
>gi|225009961|ref|ZP_03700433.1| GTP-binding protein HSR1-related [Flavobacteria bacterium MS024-3C]
gi|225005440|gb|EEG43390.1| GTP-binding protein HSR1-related [Flavobacteria bacterium MS024-3C]
Length = 204
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/205 (43%), Positives = 129/205 (62%), Gaps = 6/205 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ E CP D +PE+A +GRSNVGKSSL+N L +K LA TS PGKTQ
Sbjct: 2 KITSAEFVMSNAHVEKCPKDPIPEYAFIGRSNVGKSSLINMLTSKKSLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF+IN +W+LVDLPGYGYA + + + K+ +YFL R+ LV F+L+D +P
Sbjct: 62 INHFKINQNWFLVDLPGYGYARVSKRDKKTFQKYITEYFLKRTQLVCAFVLVDIRHEPQP 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQE-LIQGFFQTAPPWIM 282
+DL++ W+G+N+IP ++FTK DK K E N + E L + F+ AP +
Sbjct: 122 VDLDFMRWMGENEIPFCIIFTKADKLKP-----AIIEANTKAYNEKLTEEIFELAPEHFI 176
Query: 283 TSSVTNQGRDEILLHMAQLRNYWLK 307
TSS + G++E+L ++ + + K
Sbjct: 177 TSSSKHLGKEELLGYIGAINEAYFK 201
>gi|379729042|ref|YP_005321238.1| GTP-binding protein HSR1-like protein [Saprospira grandis str.
Lewin]
gi|378574653|gb|AFC23654.1| GTP-binding protein HSR1-related protein [Saprospira grandis str.
Lewin]
Length = 202
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 129/191 (67%), Gaps = 5/191 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ AE++ S + E P PE+A +GRSNVGKSSL+N L KLALTS PGKT+ I
Sbjct: 3 IKTAEYLISVPKVEMAPHSDRPEYAFIGRSNVGKSSLINMLTDHSKLALTSGRPGKTRMI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N+F IN WYLVDLPGYGYA ++ R +W K ++YFL R ++ FLLID+ +P + I
Sbjct: 63 NYFNINKDWYLVDLPGYGYAQTGKQRRQNWRKMIEEYFLLRISMQCAFLLIDSGVPPQDI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D+E+A+WLG+NQIP +VFTK DK+K ++ + ++ F++ + +++ PP ++S
Sbjct: 123 DIEFANWLGENQIPFVIVFTKTDKKKARQG-----DNHIRAFKQKLGEYWEQLPPCYLSS 177
Query: 285 SVTNQGRDEIL 295
+ T +GR+E+L
Sbjct: 178 AETKRGREELL 188
>gi|189462131|ref|ZP_03010916.1| hypothetical protein BACCOP_02811 [Bacteroides coprocola DSM 17136]
gi|189431212|gb|EDV00197.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides coprocola
DSM 17136]
Length = 239
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 130/202 (64%), Gaps = 5/202 (2%)
Query: 102 DAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
+ ++ AEFV S+ R + CP LPE+A +GRSNVGKSSL+N L ++ KLA+TS TPGKT
Sbjct: 39 NMEITSAEFVVSNSRADMCPQTNLPEYAFIGRSNVGKSSLINMLTKQPKLAMTSATPGKT 98
Query: 162 QCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
INHF +N WYLVDLPGYGYA +++ K + Y L R + +F+L+D+ + +
Sbjct: 99 LLINHFLVNKEWYLVDLPGYGYAQRGKKMMDKIQKLIEYYVLEREQMTCLFVLVDSRLES 158
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
+ IDLE+ WLG+N +P ++FTK DK+ K + N+N + E+++ ++ PP+
Sbjct: 159 QKIDLEFMEWLGENGVPFAIIFTKSDKQSSGKT-----KFNVNRYMEVLKEQWEELPPYF 213
Query: 282 MTSSVTNQGRDEILLHMAQLRN 303
++SS GR EIL ++ + N
Sbjct: 214 ISSSEKKTGRKEILDYIESINN 235
>gi|410099851|ref|ZP_11294819.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
goldsteinii CL02T12C30]
gi|409217684|gb|EKN10659.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
goldsteinii CL02T12C30]
Length = 200
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 129/195 (66%), Gaps = 5/195 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP+ PE+A +GRSNVGKSSL+N L +K LA+TS+ PGKT
Sbjct: 2 EIKSAEFVISNTDVKKCPAGNFPEYAFIGRSNVGKSSLINMLTGKKGLAMTSQKPGKTLL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN++W+LVDLPGYG+A +E R + + +DY L R L ++F+LID A+
Sbjct: 62 INHFIINNNWFLVDLPGYGFAQRGKEGRQNIQRIIEDYILEREQLTNLFVLIDCRHEAQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N +P +++FTK DK K R +ENL +QE + ++ PP +++
Sbjct: 122 IDLEFMEWLGENGVPFSIIFTKIDKISK-----GRLQENLKAYQEKLLETWEELPPILLS 176
Query: 284 SSVTNQGRDEILLHM 298
SS GR+EIL ++
Sbjct: 177 SSEKKDGREEILDYI 191
>gi|325286915|ref|YP_004262705.1| GTP-binding protein engB [Cellulophaga lytica DSM 7489]
gi|324322369|gb|ADY29834.1| GTP-binding protein engB [Cellulophaga lytica DSM 7489]
Length = 206
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 130/192 (67%), Gaps = 4/192 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A FV S+ + CPS+ LPE+A +GRSNVGKSSL+N L++RK LA TS PGKTQ
Sbjct: 2 KIKSASFVISNSNVKSCPSEPLPEYAFIGRSNVGKSSLINMLMQRKSLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF++N++W+LVDLPGYGYA ++ + + K+ DYF R LV F+L+D +
Sbjct: 62 INHFKVNENWFLVDLPGYGYARVSKKEKKTFQKYITDYFKERIQLVCAFVLVDIRHEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
+DLE+ W+G+NQIP L+FTK DK K + K+ + +N L++G ++ AP + +T
Sbjct: 122 VDLEFLEWMGENQIPFALIFTKADKLKPQV-IQKQADNYIN---ALLEGIWEDAPQYFIT 177
Query: 284 SSVTNQGRDEIL 295
SS N GR+++L
Sbjct: 178 SSANNLGREDVL 189
>gi|295135644|ref|YP_003586320.1| GTPase EngB [Zunongwangia profunda SM-A87]
gi|294983659|gb|ADF54124.1| GTPase EngB [Zunongwangia profunda SM-A87]
Length = 200
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 127/200 (63%), Gaps = 5/200 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP+ LPE+A +GRSNVGKSSL+N L RK LA TS PGKTQ
Sbjct: 2 KINTAEFVVSNSKVAKCPNSPLPEYAFIGRSNVGKSSLINMLTGRKNLAKTSAKPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +W+LVDLPGYGYA + + + KF +YF R LV F+LID+ +P
Sbjct: 62 INHFLINKNWHLVDLPGYGYAKVSKSAKKVFQKFITNYFEERKQLVCAFVLIDSRHKPQP 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
ID+E+ WLG++ IP ++FTK DK K K+ E+N+ ++QE + ++ P + +T
Sbjct: 122 IDMEFMQWLGEHAIPFCMIFTKADKLKPKE-----LEKNILNYQEEMLQVWEQMPHFFVT 176
Query: 284 SSVTNQGRDEILLHMAQLRN 303
SS G D+IL + L N
Sbjct: 177 SSTAKTGSDDILEFIENLNN 196
>gi|255530888|ref|YP_003091260.1| HSR1-like GTP-binding protein [Pedobacter heparinus DSM 2366]
gi|255343872|gb|ACU03198.1| GTP-binding protein HSR1-related [Pedobacter heparinus DSM 2366]
Length = 201
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 129/197 (65%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ A F+ S+ + P +PE+A +GRSNVGKSSL+N LV + LA TS+ PGKTQ I
Sbjct: 3 IKSATFICSNTKVSALPVANMPEYAFIGRSNVGKSSLINMLVNQHGLAKTSQRPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN+ WY+VDLPGYGYA + R +W+KF ++Y R +L VF+LID+ + + I
Sbjct: 63 NHFLINEKWYIVDLPGYGYAKVSKTSRENWEKFIRNYITKRESLQCVFVLIDSRLEPQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DLE+ W+G+ QIP L+FTK DK+ K ++N+ F++ + G+F+ PP+ +TS
Sbjct: 123 DLEFCCWMGEIQIPFALIFTKADKQSTVKT-----DKNVALFKKALGGWFEEIPPYFVTS 177
Query: 285 SVTNQGRDEILLHMAQL 301
+ G++++L + Q+
Sbjct: 178 AEKGTGKEKVLEFIEQV 194
>gi|406660680|ref|ZP_11068810.1| putative GTP-binding protein EngB [Cecembia lonarensis LW9]
gi|405555599|gb|EKB50615.1| putative GTP-binding protein EngB [Cecembia lonarensis LW9]
Length = 226
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 128/200 (64%), Gaps = 5/200 (2%)
Query: 101 RDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGK 160
+ A + +A FV S+ + CP+ +PEFA +GRSNVGKSSL+N L K LA TS PGK
Sbjct: 22 KKAMIKKASFVISNTDYKKCPAPVMPEFAFIGRSNVGKSSLVNMLTNNKNLAKTSGKPGK 81
Query: 161 TQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIP 220
TQ INHF IND+WYLVDLPGYG+A + +++ W+K DY ++R LV+V +LID+ +
Sbjct: 82 TQLINHFLINDNWYLVDLPGYGFAKVSKSIQSTWEKMISDYLIHRENLVAVCVLIDSRLD 141
Query: 221 AKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPW 280
+ ID+E+ +W G+ IP L+FTK DK+ K+K N+ F + F P +
Sbjct: 142 PQKIDIEFITWCGEQGIPFVLIFTKSDKQGKQKTSA-----NVRKFLDSCLEIFGDEPQY 196
Query: 281 IMTSSVTNQGRDEILLHMAQ 300
+TS+ T +G++E+L + +
Sbjct: 197 YVTSAQTGEGKEELLAFIGE 216
>gi|345867877|ref|ZP_08819878.1| ribosome biogenesis GTP-binding protein YsxC [Bizionia
argentinensis JUB59]
gi|344047799|gb|EGV43422.1| ribosome biogenesis GTP-binding protein YsxC [Bizionia
argentinensis JUB59]
Length = 199
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 127/201 (63%), Gaps = 11/201 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ CP D LPE+A +GRSNVGKSSL+N + RK LA TS PGKTQ
Sbjct: 2 EIKSAEFVMSNSDVTKCPKDLLPEYAFIGRSNVGKSSLINMITNRKSLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +W+LVDLPGYGYA + + + KF DYF R +VS F+L+D +P
Sbjct: 62 INHFLINKTWHLVDLPGYGYARVSKSSKKTFQKFITDYFNQREQMVSAFVLVDIRHKPQP 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLN---DFQELIQGFFQTAPPW 280
IDLE+ +W+G+N IP +++FTK DK K P+ LN D+ ++ ++ P +
Sbjct: 122 IDLEFMAWMGENDIPFSIIFTKADKLK--------PQAILNHVADYSAVMMETWEDMPNY 173
Query: 281 IMTSSVTNQGRDEILLHMAQL 301
+TSS G+DE+L ++ ++
Sbjct: 174 FITSSSKEMGKDELLNYIHEV 194
>gi|29346493|ref|NP_809996.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
thetaiotaomicron VPI-5482]
gi|383122724|ref|ZP_09943414.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
1_1_6]
gi|81445016|sp|Q8A8T4.1|ENGB_BACTN RecName: Full=Probable GTP-binding protein EngB
gi|29338389|gb|AAO76190.1| putative GTP-binding protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251842176|gb|EES70256.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
1_1_6]
Length = 202
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 127/198 (64%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP+ PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITSAEFVISNTDVKKCPTGVFPEYAFIGRSNVGKSSLINMLTARKGLAMTSATPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN SWYLVDLPGYGYA ++ + +DY L R + ++F+LID+ + +
Sbjct: 62 INHFLINQSWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP +++FTK DK K G R + N+N++ + ++ PP+ ++
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKLK-----GGRLKMNINNYLRELSKEWEELPPYFIS 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR EIL ++ +
Sbjct: 177 SSENRTGRTEILDYIENI 194
>gi|423311605|ref|ZP_17289542.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides vulgatus
CL09T03C04]
gi|392690250|gb|EIY83520.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides vulgatus
CL09T03C04]
Length = 200
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 129/195 (66%), Gaps = 5/195 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + E CP D LPE+A +GRSNVGKSSL+N L +R KLA+TS TPGKT
Sbjct: 2 EILSAEFVVSNTKVEKCPQDNLPEYAFIGRSNVGKSSLINMLAKRPKLAMTSSTPGKTLL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN WYLVDLPGYGYA+ ++ + +DY L+R + ++F+LID + +
Sbjct: 62 INHFLINKEWYLVDLPGYGYASRGKKQVEKIQQIIEDYILDREQMTNLFVLIDCRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N +P +++FTK DK NG + ++N+N + + + ++ PP ++
Sbjct: 122 IDLEFMEWLGENGVPFSIIFTKADKL---TNG--KVKDNVNKYLKKLTEQWEELPPHFVS 176
Query: 284 SSVTNQGRDEILLHM 298
SS GR EIL ++
Sbjct: 177 SSEKKTGRQEILDYI 191
>gi|443242732|ref|YP_007375957.1| GTP-binding cell division protein [Nonlabens dokdonensis DSW-6]
gi|442800131|gb|AGC75936.1| GTP-binding cell division protein [Nonlabens dokdonensis DSW-6]
Length = 200
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/199 (44%), Positives = 127/199 (63%), Gaps = 6/199 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEF+ S+ + CP+ G+PE+A +GRSNVGKSSL+N L K LA TS PGKTQ
Sbjct: 2 KITSAEFIMSNQDVKKCPNSGIPEYAFIGRSNVGKSSLINMLTNHKSLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN SW+LVDLPGYGYA + + + KF YF R L+S F+L+D +P
Sbjct: 62 INHFLINKSWHLVDLPGYGYARVSKTSKAKFQKFITKYFEQRKQLISGFVLVDVRHDPQP 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELI-QGFFQTAPPWIM 282
ID+E+ WLG++ IP ++VFTK DK K K E N+ +++ + G ++ PP+ +
Sbjct: 122 IDVEFMEWLGESGIPFSIVFTKADKLKPKA-----LERNVEAYKKFMTDGMWEEMPPYFI 176
Query: 283 TSSVTNQGRDEILLHMAQL 301
TSS GR+E+L ++ +
Sbjct: 177 TSSSDKTGREELLTYIEDI 195
>gi|313206541|ref|YP_004045718.1| ribosome biogenesis GTP-binding protein ysxc [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|383485843|ref|YP_005394755.1| ribosome biogenesis GTP-binding protein ysxc [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|386321468|ref|YP_006017630.1| putative GTPase [Riemerella anatipestifer RA-GD]
gi|407451616|ref|YP_006723340.1| GTPase [Riemerella anatipestifer RA-CH-1]
gi|416109724|ref|ZP_11591604.1| GTP-binding protein EngB [Riemerella anatipestifer RA-YM]
gi|442314258|ref|YP_007355561.1| putative GTPase [Riemerella anatipestifer RA-CH-2]
gi|312445857|gb|ADQ82212.1| ribosome biogenesis GTP-binding protein YsxC [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|315023518|gb|EFT36522.1| GTP-binding protein EngB [Riemerella anatipestifer RA-YM]
gi|325336011|gb|ADZ12285.1| Predicted GTPase [Riemerella anatipestifer RA-GD]
gi|380460528|gb|AFD56212.1| ribosome biogenesis GTP-binding protein ysxc [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|403312600|gb|AFR35441.1| putative GTPase [Riemerella anatipestifer RA-CH-1]
gi|441483181|gb|AGC39867.1| putative GTPase [Riemerella anatipestifer RA-CH-2]
Length = 208
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 128/196 (65%), Gaps = 5/196 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ AEFVKSS + ++CP LPE+A +GRSNVGKSSL+N++ K LA TS+TPGKTQ I
Sbjct: 4 IKSAEFVKSSQKWQECPEANLPEYAFIGRSNVGKSSLINAITGNKNLAKTSQTPGKTQLI 63
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN+ WYL DLPGYGYA + R D++K +Y LNR LV++F+L+D + I
Sbjct: 64 NHFIINEEWYLTDLPGYGYAKVSKTQRKDFEKLITNYILNRKNLVNLFILVDIRHTPQKI 123
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DLE+ W G++ IP ++VFTK DK K N K+ N+ D+ + + ++ AP +TS
Sbjct: 124 DLEFIEWCGESGIPFSIVFTKEDKL--KPNAAKK---NVEDYTKTLLESWEEAPQMYITS 178
Query: 285 SVTNQGRDEILLHMAQ 300
+ G + IL ++ Q
Sbjct: 179 AEKKTGTEAILEYIEQ 194
>gi|423135988|ref|ZP_17123633.1| ribosome biogenesis GTP-binding protein YsxC [Myroides odoratimimus
CIP 101113]
gi|371639193|gb|EHO04811.1| ribosome biogenesis GTP-binding protein YsxC [Myroides odoratimimus
CIP 101113]
Length = 206
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/199 (44%), Positives = 132/199 (66%), Gaps = 6/199 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP++ +PE+A +GRSNVGKSSL+N L +K LA TS PGKTQ
Sbjct: 2 KINTAEFVVSNSDAKKCPNEPIPEYAFIGRSNVGKSSLINMLTNQKYLAKTSSRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF+IN +WYLVDLPGYGYA ++ + + KF DYF NR LVS F+L+D A+
Sbjct: 62 INHFKINSNWYLVDLPGYGYAKVSKKTKAVFQKFITDYFENRQQLVSAFVLVDIRHEAQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDF-QELIQGFFQTAPPWIM 282
IDLE+ +LG+ ++P +++FTK DK K+K + D+ ++++ ++ PP +
Sbjct: 122 IDLEFMQYLGETEVPFSIIFTKADKVGKQKVASL-----IADYRKKMLADNWEEMPPCFV 176
Query: 283 TSSVTNQGRDEILLHMAQL 301
TSS GRDE+L ++ ++
Sbjct: 177 TSSEDKTGRDEVLNYIEEI 195
>gi|150005485|ref|YP_001300229.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides vulgatus
ATCC 8482]
gi|294778688|ref|ZP_06744107.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides vulgatus
PC510]
gi|319640710|ref|ZP_07995424.1| GTP-binding protein engB [Bacteroides sp. 3_1_40A]
gi|345517722|ref|ZP_08797187.1| GTP-binding protein engB [Bacteroides sp. 4_3_47FAA]
gi|166225943|sp|A6L4J3.1|ENGB_BACV8 RecName: Full=Probable GTP-binding protein EngB
gi|149933909|gb|ABR40607.1| putative GTP-binding protein [Bacteroides vulgatus ATCC 8482]
gi|254836829|gb|EET17138.1| GTP-binding protein engB [Bacteroides sp. 4_3_47FAA]
gi|294447344|gb|EFG15925.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides vulgatus
PC510]
gi|317387672|gb|EFV68537.1| GTP-binding protein engB [Bacteroides sp. 3_1_40A]
Length = 200
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 128/195 (65%), Gaps = 5/195 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + E CP D LPE+A +GRSNVGKSSL+N L +R KLA+TS TPGKT
Sbjct: 2 EILSAEFVVSNTKVEKCPQDNLPEYAFIGRSNVGKSSLINMLAKRPKLAMTSSTPGKTLL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN WYLVDLPGYGYA+ ++ + +DY L R + ++F+LID + +
Sbjct: 62 INHFLINKEWYLVDLPGYGYASRGKKQVEKIQQIIEDYILEREQMTNLFVLIDCRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N +P +++FTK DK NG + ++N+N + + + ++ PP ++
Sbjct: 122 IDLEFMEWLGENGVPFSIIFTKADKL---TNG--KVKDNVNKYLKKLTEQWEELPPHFVS 176
Query: 284 SSVTNQGRDEILLHM 298
SS GR EIL ++
Sbjct: 177 SSEKKTGRQEILDYI 191
>gi|345516317|ref|ZP_08795810.1| GTP-binding protein engB [Bacteroides dorei 5_1_36/D4]
gi|423238864|ref|ZP_17219980.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides dorei
CL03T12C01]
gi|229433921|gb|EEO43998.1| GTP-binding protein engB [Bacteroides dorei 5_1_36/D4]
gi|392647742|gb|EIY41440.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides dorei
CL03T12C01]
Length = 200
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 128/195 (65%), Gaps = 5/195 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + E CP D LPE+A +GRSNVGKSSL+N L +R KLA+TS TPGKT
Sbjct: 2 EILSAEFVVSNTKVEKCPQDNLPEYAFIGRSNVGKSSLINMLTKRPKLAMTSSTPGKTLL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN WYLVDLPGYGYA+ ++ + +DY L R + ++F+LID + +
Sbjct: 62 INHFLINKEWYLVDLPGYGYASRGKKQVEKIQQIIEDYILEREQMTNLFVLIDCRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N +P +++FTK DK NG + ++N+N + + + ++ PP ++
Sbjct: 122 IDLEFMEWLGENGVPFSIIFTKADKL---TNG--KVKDNVNKYLKKLTEQWEELPPHFVS 176
Query: 284 SSVTNQGRDEILLHM 298
SS GR EIL ++
Sbjct: 177 SSEKKTGRQEILDYI 191
>gi|343084511|ref|YP_004773806.1| GTP-binding protein engB [Cyclobacterium marinum DSM 745]
gi|342353045|gb|AEL25575.1| GTP-binding protein engB [Cyclobacterium marinum DSM 745]
Length = 201
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 128/190 (67%), Gaps = 5/190 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ A F+ S+ CP+ PEFA +GRSNVGKSSL+N L K LA TS PGKTQ I
Sbjct: 2 LKNARFLMSNSDHTKCPAPTKPEFAFIGRSNVGKSSLINMLTNHKHLAKTSGKPGKTQLI 61
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF I+ WY+VDLPGYG+A A ++L+ +W+K ++Y R LVSVF+LID+ + + I
Sbjct: 62 NHFEIDSRWYMVDLPGYGFAKANKKLKAEWNKMIRNYLTERENLVSVFVLIDSRLNPQAI 121
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D+E+ +W GQ ++P+TL+FTK DK+ + K +N++ F + ++ F AP + +TS
Sbjct: 122 DIEFITWCGQLELPVTLIFTKADKQSQSKTS-----DNVHRFLDEMEKMFVEAPEFFVTS 176
Query: 285 SVTNQGRDEI 294
++T+ GR+E+
Sbjct: 177 AMTSVGREEL 186
>gi|212694988|ref|ZP_03303116.1| hypothetical protein BACDOR_04525 [Bacteroides dorei DSM 17855]
gi|237710675|ref|ZP_04541156.1| GTPase EngB [Bacteroides sp. 9_1_42FAA]
gi|265750348|ref|ZP_06086411.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
3_1_33FAA]
gi|423232433|ref|ZP_17218834.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides dorei
CL02T00C15]
gi|423242941|ref|ZP_17224017.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides dorei
CL02T12C06]
gi|212662441|gb|EEB23015.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides dorei DSM
17855]
gi|229455397|gb|EEO61118.1| GTPase EngB [Bacteroides sp. 9_1_42FAA]
gi|263237244|gb|EEZ22694.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
3_1_33FAA]
gi|392624482|gb|EIY18569.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides dorei
CL02T00C15]
gi|392646729|gb|EIY40441.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides dorei
CL02T12C06]
Length = 200
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 128/195 (65%), Gaps = 5/195 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + E CP D LPE+A +GRSNVGKSSL+N L +R KLA+TS TPGKT
Sbjct: 2 EILSAEFVVSNTKVEKCPQDNLPEYAFIGRSNVGKSSLINMLTKRPKLAMTSSTPGKTLL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN WYLVDLPGYGYA+ ++ + +DY L R + ++F+LID + +
Sbjct: 62 INHFLINKEWYLVDLPGYGYASRGKKQVEKIQQIIEDYILEREQMTNLFVLIDCRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N +P +++FTK DK NG + ++N+N + + + ++ PP ++
Sbjct: 122 IDLEFMEWLGENGVPFSIIFTKADKL---TNG--KVKDNVNKYLKKLTEQWEELPPHFVS 176
Query: 284 SSVTNQGRDEILLHM 298
SS GR EIL ++
Sbjct: 177 SSEKKTGRQEILDYI 191
>gi|424843007|ref|ZP_18267632.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Saprospira
grandis DSM 2844]
gi|395321205|gb|EJF54126.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Saprospira
grandis DSM 2844]
Length = 202
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 128/191 (67%), Gaps = 5/191 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ AE++ S + E P+ PE+A +GRSNVGKSSL+N L KLALTS PGKT+ I
Sbjct: 3 IKTAEYLISVPKVEMAPNSDRPEYAFIGRSNVGKSSLINMLTGHSKLALTSGRPGKTRMI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N+F IN WYLVDLPGYGYA ++ R W K ++YFL R ++ FLLID+ +P + I
Sbjct: 63 NYFDINKEWYLVDLPGYGYAQTGKQRRQTWRKMIEEYFLLRISMQCAFLLIDSGVPPQDI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D+E+A+WLG+NQIP +VFTK DK+K ++ + + F++ + +++ PP ++S
Sbjct: 123 DIEFANWLGENQIPFVVVFTKTDKKKARQG-----DNYIRAFKQKLGEYWEQLPPCYLSS 177
Query: 285 SVTNQGRDEIL 295
+ T +GR+E+L
Sbjct: 178 AETKRGREELL 188
>gi|408492194|ref|YP_006868563.1| GTP-binding protein EngB [Psychroflexus torquis ATCC 700755]
gi|408469469|gb|AFU69813.1| GTP-binding protein EngB [Psychroflexus torquis ATCC 700755]
Length = 199
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 127/198 (64%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +EFV S+ CP+ LPE+A +GRSNVGKSSL+N L R LA S PGKT+
Sbjct: 2 KIKTSEFVMSNSDVTKCPNSQLPEYAFIGRSNVGKSSLINMLTERNSLAKVSGKPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF INDSW+LVDLPGYGYA ++ + + K+ YF R LV+ F+LID+ +P
Sbjct: 62 INHFLINDSWHLVDLPGYGYAKVSKKEKKTFQKYITAYFEKRQQLVNTFVLIDSRHAPQP 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
+DLE+ WLG+N IP+++VFTK DK K K E N+ D++ + ++ PP+ T
Sbjct: 122 LDLEFLEWLGKNAIPLSIVFTKTDKLKP-----KVLENNIIDYKTKLMETWEELPPYFTT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GRD+IL ++ ++
Sbjct: 177 SSAHKTGRDDILNYIHEI 194
>gi|255082732|ref|XP_002504352.1| predicted protein [Micromonas sp. RCC299]
gi|226519620|gb|ACO65610.1| predicted protein [Micromonas sp. RCC299]
Length = 195
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 127/196 (64%), Gaps = 4/196 (2%)
Query: 107 QAEFVKSSVRTEDCPS-DGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCIN 165
+ EFV ++ +DCP DGLPE A++GRSNVGKSSLLN L + K AL S PG TQ IN
Sbjct: 3 KVEFVSATEDADDCPPPDGLPEVAVIGRSNVGKSSLLNLLTKGKSGALVSSKPGTTQHIN 62
Query: 166 HFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPID 225
H+ + W++VDLPGYG+A A +E WD+FTK+YF RS L V LLIDASIP D
Sbjct: 63 HYLVAKKWWIVDLPGYGFAKASKESTEMWDRFTKEYFTTRSNLAGVLLLIDASIPPMEKD 122
Query: 226 LEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSS 285
LEYA WL + +P T+V TKCD+ K G + N+++ + ++ + P I TSS
Sbjct: 123 LEYADWLITHNVPFTIVHTKCDRNKP---GMPAVDTNIDELRRILDEKWHRLPSMISTSS 179
Query: 286 VTNQGRDEILLHMAQL 301
V++ GR+++L ++ +
Sbjct: 180 VSHDGREDVLKFISSI 195
>gi|301309826|ref|ZP_07215765.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 20_3]
gi|423340300|ref|ZP_17318039.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
distasonis CL09T03C24]
gi|300831400|gb|EFK62031.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 20_3]
gi|409227735|gb|EKN20631.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
distasonis CL09T03C24]
Length = 200
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 128/200 (64%), Gaps = 5/200 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ CP PE+A +GRSNVGKSSL+N L +K LA+TS+TPGKT
Sbjct: 2 EIKSAEFVISNTDVRKCPEGNKPEYAFIGRSNVGKSSLINMLTNKKGLAMTSQTPGKTLL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IND WYLVDLPGYG+A +E R + ++Y L+R L ++F+L+D A+
Sbjct: 62 INHFLINDEWYLVDLPGYGFAQRGKENREQLKRIIENYILDREQLTNLFVLLDCRHEAQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG++ +P +++FTK DK K R +ENL + + + ++ PP ++
Sbjct: 122 IDLEFMEWLGESGVPFSIIFTKIDKISK-----GRLKENLKVYTDKLLETWEELPPIFLS 176
Query: 284 SSVTNQGRDEILLHMAQLRN 303
SS +GRDEIL ++ + N
Sbjct: 177 SSEKKEGRDEILDYIESINN 196
>gi|423249960|ref|ZP_17230976.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
CL03T00C08]
gi|423255460|ref|ZP_17236389.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
CL03T12C07]
gi|392651105|gb|EIY44770.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
CL03T12C07]
gi|392654022|gb|EIY47671.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
CL03T00C08]
Length = 201
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 127/198 (64%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP+ PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITNAEFVISNTDVKKCPAGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN+SWYLVDLPGYGYA ++ + +DY L R + ++F+LID+ + +
Sbjct: 62 INHFLINNSWYLVDLPGYGYARRGQKGQEQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP ++FTK DK K G R + N+N + ++ ++ PP+ +T
Sbjct: 122 IDLEFMEWLGENGIPFAIIFTKADKLK-----GGRLKININAYLRELRKQWEELPPYFIT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR E+L ++ +
Sbjct: 177 SSEERLGRTEVLNYIESI 194
>gi|357060079|ref|ZP_09120853.1| GTP-binding protein engB [Alloprevotella rava F0323]
gi|355376969|gb|EHG24209.1| GTP-binding protein engB [Alloprevotella rava F0323]
Length = 204
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 129/198 (65%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEF S+ R + CP +PE+A +GRSNVGKSSL+N L +RK LA+TS TPGKT
Sbjct: 2 KINSAEFEISNSRADQCPKSNIPEYAFIGRSNVGKSSLINMLTQRKGLAMTSSTPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHFRIND WYLVDLPGYGYA ++ + Y L R L ++F+LID+ + +
Sbjct: 62 INHFRINDEWYLVDLPGYGYAKRSKKDQEKLQNIISFYVLEREQLTNLFVLIDSRLKPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N +P +++FTK DK KK G R +N+ F + ++ ++ PP +T
Sbjct: 122 IDLEFIEWLGENGVPFSIIFTKADKNKK---GELR--KNVETFLDTLREQWEELPPHFIT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS + GR+E+L ++ +
Sbjct: 177 SSESRLGREELLNYIDNI 194
>gi|410027630|ref|ZP_11277466.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Marinilabilia
sp. AK2]
Length = 202
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 130/202 (64%), Gaps = 6/202 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +A FV S+ + CP+ +PEFA +GRSNVGKSSL+N L K LA TS PGKTQ I
Sbjct: 2 IKKASFVISNTDYKKCPAPVMPEFAFIGRSNVGKSSLVNMLTNNKNLAKTSGKPGKTQLI 61
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IND+WYLVDLPGYG+A + +++ W+K DY ++R LV+V +LID+ + + I
Sbjct: 62 NHFLINDNWYLVDLPGYGFAKVSKSIQSTWEKMISDYLIHRENLVAVCVLIDSRLDPQKI 121
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DLE+ +W G+ +IP L+FTK DK+ K K G N+ F + F P + +TS
Sbjct: 122 DLEFITWCGEQEIPFVLIFTKSDKQGKTKTGA-----NVRKFLDACFEIFGDEPQYYVTS 176
Query: 285 SVTNQGRDEILLHMA-QLRNYW 305
+ T G++ +L +A +++ Y+
Sbjct: 177 AQTGDGKEPLLEFIADEVKEYY 198
>gi|393783906|ref|ZP_10372075.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
salyersiae CL02T12C01]
gi|392667565|gb|EIY61072.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
salyersiae CL02T12C01]
Length = 201
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 128/198 (64%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+++ AEF+ S+ + CP+ LPE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EISNAEFIISNTDVKKCPAGRLPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN+ WY+VDLPGYGYA + + +DY L R + ++FLLID+ + +
Sbjct: 62 INHFLINNGWYIVDLPGYGYARRGMKGQDQIRTIIEDYILEREQMTNLFLLIDSRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP +++FTK DK K G R + N+N + + ++ PP+ ++
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKLK-----GGRLKMNINAYLRELHKQWEELPPYFVS 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR+EIL ++ +
Sbjct: 177 SSEDRTGREEILDYIESI 194
>gi|228473700|ref|ZP_04058448.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
gingivalis ATCC 33624]
gi|228274847|gb|EEK13664.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
gingivalis ATCC 33624]
Length = 200
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 125/195 (64%), Gaps = 5/195 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ QA FV S+ + CP+ LPE+A +GRSNVGKSSL+N L K LA TS PGKTQ
Sbjct: 2 EIKQAAFVVSNTQVAKCPTHKLPEYAFIGRSNVGKSSLINMLTNHKGLAKTSSKPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN WYLVDLPGYGYA ++ + + +F DYF R LV+ F+L+D +
Sbjct: 62 INHFLINKEWYLVDLPGYGYAKVSKQSKKTFQQFITDYFKKRRELVNAFVLVDIRHEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP +VFTK DK + K+ +E++ + E++ ++ PP+ +T
Sbjct: 122 IDLEFMQWLGENAIPFAIVFTKADKLTE-----KQIQEHVTSYSEILLQQWEEMPPYFIT 176
Query: 284 SSVTNQGRDEILLHM 298
SS G++++L ++
Sbjct: 177 SSENRLGKEDLLSYI 191
>gi|423299716|ref|ZP_17277741.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
finegoldii CL09T03C10]
gi|408473525|gb|EKJ92047.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
finegoldii CL09T03C10]
Length = 201
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 126/198 (63%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP+ PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITSAEFVISNTDVKKCPAGTFPEYAFIGRSNVGKSSLINMLTARKGLAMTSATPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +WYLVDLPGYGYA ++ + +DY L R + ++FLLID+ + +
Sbjct: 62 INHFLINKNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFLLIDSRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP +++FTK DK K G R + N+N + + ++ PP+ ++
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKLK-----GGRLKMNINAYLRELSKQWEELPPYFIS 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR EIL ++ +
Sbjct: 177 SSENRTGRTEILDYIENI 194
>gi|406672317|ref|ZP_11079543.1| ribosome biogenesis GTP-binding protein YsxC [Bergeyella zoohelcum
CCUG 30536]
gi|405588005|gb|EKB61723.1| ribosome biogenesis GTP-binding protein YsxC [Bergeyella zoohelcum
CCUG 30536]
Length = 206
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 125/191 (65%), Gaps = 5/191 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ A FVKSS + +DCP LPE+A +GRSNVGKSSL+N+++ RK LA TS+TPGKTQ I
Sbjct: 3 IHSANFVKSSGKWQDCPEPTLPEYAFIGRSNVGKSSLINAMMNRKDLAKTSQTPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN++W+L DLPGYGYA + LR D++K +Y LNR LV++F+LID + I
Sbjct: 63 NHFLINENWFLTDLPGYGYAKVSKSLRKDFEKLITNYILNRKNLVNLFVLIDVRHTPQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DLE+ W ++ IP ++VFTK DK K G E+N + + E + + P +TS
Sbjct: 123 DLEFMEWCAESGIPFSIVFTKADKLK-----GMMAEKNADAYLEKMLETWDEVPNHFLTS 177
Query: 285 SVTNQGRDEIL 295
S G +++L
Sbjct: 178 SEKKIGTEDVL 188
>gi|363582943|ref|ZP_09315753.1| GTP-binding protein YsxC [Flavobacteriaceae bacterium HQM9]
Length = 205
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 128/204 (62%), Gaps = 5/204 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+++ A+FV S+ CP D LPE+A +GRSNVGKSSL+N+L+ RK LA TS PGKTQ
Sbjct: 2 KISSADFVISNSDVAKCPGDTLPEYAFIGRSNVGKSSLINALMGRKSLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF +N +W+LVDLPGYGYA + + + KF +YF R LVS F+L+D +
Sbjct: 62 INHFLVNKNWFLVDLPGYGYARTSKSTKKTFQKFITNYFKERKQLVSAFVLVDCRHEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDL + WL NQ+P ++FTK DK +++ +++ + F++ PP+ +T
Sbjct: 122 IDLAFMEWLANNQVPFFIIFTKADKLTI-----NTLPKHIENYKSKMLEFWEEMPPYFIT 176
Query: 284 SSVTNQGRDEILLHMAQLRNYWLK 307
SS + QG +E+L H+ QL + K
Sbjct: 177 SSTSKQGCEEVLTHIDQLNQDFFK 200
>gi|313146704|ref|ZP_07808897.1| GTPase EngB [Bacteroides fragilis 3_1_12]
gi|423277021|ref|ZP_17255935.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
HMW 610]
gi|424663295|ref|ZP_18100332.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
HMW 616]
gi|313135471|gb|EFR52831.1| GTPase EngB [Bacteroides fragilis 3_1_12]
gi|404576985|gb|EKA81723.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
HMW 616]
gi|404587497|gb|EKA92036.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
HMW 610]
Length = 201
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 129/198 (65%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP+ PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITNAEFVISNTDVKKCPAGTFPEYAFIGRSNVGKSSLINMLTARKGLAMTSATPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN+SWYLVDLPGYGYA ++ + +DY L R + ++F+LID+ + +
Sbjct: 62 INHFLINNSWYLVDLPGYGYARRGQKGQEQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
ID+E+ WLG+N IP +++FTK DK K G R + N+N + + ++ ++ PP+ +T
Sbjct: 122 IDIEFMEWLGENGIPFSIIFTKADKLK-----GGRLKMNINAYLKELRKQWEELPPYFIT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR E+L ++ +
Sbjct: 177 SSEECLGRTEVLNYIESI 194
>gi|126663224|ref|ZP_01734222.1| GTPase EngB [Flavobacteria bacterium BAL38]
gi|126624882|gb|EAZ95572.1| GTPase EngB [Flavobacteria bacterium BAL38]
Length = 206
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 127/198 (64%), Gaps = 4/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP + LPE+A +GRSNVGKSSL+N L K LA TS PGKTQ
Sbjct: 2 KINTAEFVISNSEVDKCPKERLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSSKPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF+IN++W+LVDLPGYGYA ++ + + +F DYF R LV F+LID + A+
Sbjct: 62 INHFKINNNWFLVDLPGYGYARVSKKTKAVFQQFIMDYFEQREQLVCAFVLIDIRLEAQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ +LG+++IP ++FTK DK K K ++L+ G + PP+ +T
Sbjct: 122 IDLEFMEYLGESEIPFAIIFTKSDKLGKNKVNNHVEAYK----KQLLAGDWAEMPPYFVT 177
Query: 284 SSVTNQGRDEILLHMAQL 301
SS+ GR+ IL ++ Q+
Sbjct: 178 SSLEAIGREGILEYINQI 195
>gi|298207894|ref|YP_003716073.1| GTP-binding protein [Croceibacter atlanticus HTCC2559]
gi|83850535|gb|EAP88403.1| GTP-binding protein [Croceibacter atlanticus HTCC2559]
Length = 202
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 122/195 (62%), Gaps = 5/195 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A+FV S+ + CP D LPE+A +GRSNVGKSSL+N + KKLA TS TPGKTQ
Sbjct: 2 KINTAKFVISNSDVDKCPQDKLPEYAFIGRSNVGKSSLINMMTNNKKLAKTSSTPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IND WYLVDLPGYGYA ++ + + KF DYF+ RS LV F+L+D+ +
Sbjct: 62 INHFIINDEWYLVDLPGYGYARTSKKTKKVFQKFITDYFVKRSQLVCAFVLVDSRHAPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG N IP ++FTK DK KK + + N + + + P + T
Sbjct: 122 IDLEFMEWLGTNSIPFAIIFTKTDKLKKGE-----WDRNFKVYSSKMMETWAEMPEYFTT 176
Query: 284 SSVTNQGRDEILLHM 298
SS+ G +E+L ++
Sbjct: 177 SSLHKTGAEEVLEYI 191
>gi|344203323|ref|YP_004788466.1| GTP-binding protein engB [Muricauda ruestringensis DSM 13258]
gi|343955245|gb|AEM71044.1| GTP-binding protein engB [Muricauda ruestringensis DSM 13258]
Length = 204
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 125/193 (64%), Gaps = 6/193 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ CP++ LPE+A +GRSNVGKSSL+N LV RK LA TS PGKTQ
Sbjct: 2 KITSAEFVMSNSNVAKCPNEPLPEYAFIGRSNVGKSSLINMLVERKALAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF+IN++W+LVDLPGYGYA ++ + + K+ +YF R LV F+L+D +P
Sbjct: 62 INHFKINNNWFLVDLPGYGYAKVSKKDKRTFQKYITEYFQKRKQLVCGFVLVDIRHEPQP 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDF-QELIQGFFQTAPPWIM 282
+DLE+ WLG NQIP ++FTK DK K E+ N + Q+L++ ++ PP
Sbjct: 122 VDLEFMEWLGTNQIPFAIIFTKADKLKP-----SVIEKQANTYLQKLLECAWEEVPPHFT 176
Query: 283 TSSVTNQGRDEIL 295
TSS G++E+L
Sbjct: 177 TSSTNRMGKEELL 189
>gi|365877473|ref|ZP_09416977.1| ribosome biogenesis GTP-binding protein ysxc [Elizabethkingia
anophelis Ag1]
gi|442587748|ref|ZP_21006563.1| putative GTPase [Elizabethkingia anophelis R26]
gi|365754906|gb|EHM96841.1| ribosome biogenesis GTP-binding protein ysxc [Elizabethkingia
anophelis Ag1]
gi|442562602|gb|ELR79822.1| putative GTPase [Elizabethkingia anophelis R26]
Length = 205
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 127/191 (66%), Gaps = 5/191 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ EFVKSS + ++CP LPE+A +GRSNVGKSSL+N+++ RK LA TS+TPGKTQ I
Sbjct: 3 IKSVEFVKSSSKWQECPEANLPEYAFIGRSNVGKSSLINAMMDRKDLAKTSQTPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF +N++WYL DLPGYGYA + LR ++K +Y LNR+ LV++F+L+D + I
Sbjct: 63 NHFLVNETWYLTDLPGYGYAKVSKTLRKSFEKLITNYILNRNNLVNLFVLVDIRHAPQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D+E+ W G++ IP +++FTK DK K K E ++ + + + F++ P +TS
Sbjct: 123 DIEFMQWCGESGIPFSIIFTKADKLKPKA-----IENHVKAYHDELLQFWEELPQSYITS 177
Query: 285 SVTNQGRDEIL 295
+ +G D IL
Sbjct: 178 AEKKEGGDAIL 188
>gi|372222790|ref|ZP_09501211.1| GTP-binding protein engB [Mesoflavibacter zeaxanthinifaciens S86]
Length = 206
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 89/199 (44%), Positives = 128/199 (64%), Gaps = 6/199 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ CP + LPE+A +GRSNVGKSSL+N LV RK LA TS PGKTQ
Sbjct: 2 KITSAEFVMSNSDVAKCPKEPLPEYAFIGRSNVGKSSLINMLVDRKSLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF+IN +W+LVDLPGYGYA ++ + + K+ +YFL R LV F+L+D +P
Sbjct: 62 INHFKINKNWFLVDLPGYGYARVSKKDKKTFQKYITEYFLKRKQLVCAFVLVDIRHEPQP 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDF-QELIQGFFQTAPPWIM 282
ID+E+ WLG N IP ++FTK DK K E+N+ + EL+ ++ PP+ +
Sbjct: 122 IDMEFMEWLGSNGIPFAIIFTKADKLKPGA-----IEKNVKAYITELLASVWEETPPYFI 176
Query: 283 TSSVTNQGRDEILLHMAQL 301
TSS + G++ +L ++ ++
Sbjct: 177 TSSSKHLGKEALLNYIEEI 195
>gi|317478908|ref|ZP_07938055.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
4_1_36]
gi|316904885|gb|EFV26692.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
4_1_36]
Length = 219
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 124/197 (62%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ AEFV S+ CP+ PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT I
Sbjct: 20 ITNAEFVISNTDVRKCPTGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTMLI 79
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN SWY+VDLPGYGYA ++ + + + Y L R + +F+LID+ + + I
Sbjct: 80 NHFLINKSWYIVDLPGYGYAKRGQKGQEQIKRIIESYILQREQMTCLFVLIDSRLAPQAI 139
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DLE+ WLG+N +P +VFTK DK K G R ++N++ E ++ ++ PP+ +TS
Sbjct: 140 DLEFTEWLGENGVPFAIVFTKADKLK-----GGRLNTHINEYLEQLKEQWEELPPYFITS 194
Query: 285 SVTNQGRDEILLHMAQL 301
S GR E+L ++ +
Sbjct: 195 SENRMGRKELLDYIESI 211
>gi|429750902|ref|ZP_19283901.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 332 str. F0381]
gi|429163663|gb|EKY05866.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 332 str. F0381]
Length = 200
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 125/197 (63%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +AEFV S+ + CP + LPE+A +GRSNVGKSSL+N L +K LA TS PGKTQ I
Sbjct: 2 IKKAEFVMSNSQVAKCPKEPLPEYAFIGRSNVGKSSLINMLTNQKNLAKTSARPGKTQLI 61
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF+IND W+LVDLPGYGYA + + + KF +YF R LV F+L+D + I
Sbjct: 62 NHFKINDQWFLVDLPGYGYARVSKTTKKTFQKFITNYFEQRKQLVCAFVLVDIRHEPQKI 121
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DLE+ WLG+N +P +VFTK DK K E N+ +QE++ ++ PP+ +TS
Sbjct: 122 DLEFMQWLGENAVPFAIVFTKADKLKPLA-----IERNIATYQEILLKSWEAMPPYFVTS 176
Query: 285 SVTNQGRDEILLHMAQL 301
+ G++E++ ++ +
Sbjct: 177 AENYIGKEELVGYIEDI 193
>gi|441499171|ref|ZP_20981358.1| GTP-binding protein EngB [Fulvivirga imtechensis AK7]
gi|441437037|gb|ELR70394.1| GTP-binding protein EngB [Fulvivirga imtechensis AK7]
Length = 208
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 122/192 (63%), Gaps = 5/192 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ QA FV SS CP D PEFA +GRSNVGKSSL+N L KKLA S PGKTQ
Sbjct: 2 RITQANFVTSSSHHNQCPEDKRPEFAFIGRSNVGKSSLINMLTNHKKLAKVSGKPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IND+W+LVDLPGYG+A + + W DY R L+ F+LID+ + +P
Sbjct: 62 INHFLINDNWFLVDLPGYGWAKVAKTEKEKWGTMIHDYLTLRENLLCTFILIDSRLAPQP 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
ID+E+ +WLGQ +P L+FTK DK+ K K + ++ +++ + ++ PP ++T
Sbjct: 122 IDVEFINWLGQQALPFALIFTKVDKQSKNKT-----QSSIAKYKKHLLNYWAELPPVLVT 176
Query: 284 SSVTNQGRDEIL 295
SS + +G++++L
Sbjct: 177 SSQSGEGKEDVL 188
>gi|423306403|ref|ZP_17284402.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides uniformis
CL03T00C23]
gi|423309007|ref|ZP_17286997.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides uniformis
CL03T12C37]
gi|392678910|gb|EIY72308.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides uniformis
CL03T00C23]
gi|392685746|gb|EIY79057.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides uniformis
CL03T12C37]
Length = 202
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 124/197 (62%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ AEFV S+ CP+ PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT I
Sbjct: 3 ITNAEFVISNTDVRKCPTGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTMLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN SWY+VDLPGYGYA ++ + + + Y L R + +F+LID+ + + I
Sbjct: 63 NHFLINKSWYIVDLPGYGYAKRGQKGQEQIKRIIESYILQREQMTCLFVLIDSRLAPQAI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DLE+ WLG+N +P +VFTK DK K G R ++N++ E ++ ++ PP+ +TS
Sbjct: 123 DLEFTEWLGENGVPFAIVFTKADKLK-----GGRLNTHINEYLEQLKEQWEELPPYFITS 177
Query: 285 SVTNQGRDEILLHMAQL 301
S GR E+L ++ +
Sbjct: 178 SENRMGRKELLDYIESI 194
>gi|270294150|ref|ZP_06200352.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. D20]
gi|270275617|gb|EFA21477.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. D20]
Length = 202
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 124/197 (62%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ AEFV S+ CP+ PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT I
Sbjct: 3 ITNAEFVISNTDVRKCPAGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTMLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN SWY+VDLPGYGYA ++ + + + Y L R + +F+LID+ + + I
Sbjct: 63 NHFLINKSWYIVDLPGYGYAKRGQKGQEQIKRIIESYILQREQMTCLFVLIDSRLAPQAI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DLE+ WLG+N +P +VFTK DK K G R ++N++ E ++ ++ PP+ +TS
Sbjct: 123 DLEFTEWLGENGVPFAIVFTKADKLK-----GGRLNTHINEYLEQLKEQWEELPPYFITS 177
Query: 285 SVTNQGRDEILLHMAQL 301
S GR E+L ++ +
Sbjct: 178 SENRMGRKELLDYIESI 194
>gi|150008077|ref|YP_001302820.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
distasonis ATCC 8503]
gi|255014915|ref|ZP_05287041.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
2_1_7]
gi|256840744|ref|ZP_05546252.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides sp.
D13]
gi|262381349|ref|ZP_06074487.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
2_1_33B]
gi|298376570|ref|ZP_06986525.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
3_1_19]
gi|410105375|ref|ZP_11300283.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides sp.
D25]
gi|423331403|ref|ZP_17309187.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
distasonis CL03T12C09]
gi|166225966|sp|A6LBY4.1|ENGB_PARD8 RecName: Full=Probable GTP-binding protein EngB
gi|149936501|gb|ABR43198.1| GTP-binding protein [Parabacteroides distasonis ATCC 8503]
gi|256738016|gb|EEU51342.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides sp.
D13]
gi|262296526|gb|EEY84456.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
2_1_33B]
gi|298266448|gb|EFI08106.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
3_1_19]
gi|409230699|gb|EKN23561.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
distasonis CL03T12C09]
gi|409232585|gb|EKN25431.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides sp.
D25]
Length = 200
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 128/200 (64%), Gaps = 5/200 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ CP PE+A +GRSNVGKSSL+N L +K LA+TS+TPGKT
Sbjct: 2 EIKSAEFVISNTDVRKCPEGNKPEYAFIGRSNVGKSSLINMLTNKKGLAMTSQTPGKTLL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN+ WYLVDLPGYG+A +E R + ++Y L+R L ++F+L+D A+
Sbjct: 62 INHFLINNEWYLVDLPGYGFAQRGKENREQLKRIIENYILDREQLTNLFVLLDCRHEAQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG++ +P +++FTK DK K R +ENL + + + ++ PP ++
Sbjct: 122 IDLEFMEWLGESGVPFSIIFTKIDKISK-----GRLKENLKVYTDKLLETWEELPPIFLS 176
Query: 284 SSVTNQGRDEILLHMAQLRN 303
SS +GRDEIL ++ + N
Sbjct: 177 SSEKKEGRDEILDYIESINN 196
>gi|374598881|ref|ZP_09671883.1| GTP-binding protein engB [Myroides odoratus DSM 2801]
gi|423322927|ref|ZP_17300769.1| ribosome biogenesis GTP-binding protein YsxC [Myroides odoratimimus
CIP 103059]
gi|373910351|gb|EHQ42200.1| GTP-binding protein engB [Myroides odoratus DSM 2801]
gi|404609948|gb|EKB09306.1| ribosome biogenesis GTP-binding protein YsxC [Myroides odoratimimus
CIP 103059]
Length = 206
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 126/195 (64%), Gaps = 4/195 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A FV S+ CP++ LPE+A +GRSNVGKSSL+N L K LA TS PGKTQ
Sbjct: 2 KINTAAFVMSNSEVSKCPNEPLPEYAFIGRSNVGKSSLINMLTNSKSLAKTSSRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF+IN +W+LVDLPGYGYA ++ + + KF +YF R LVS F+LID A+
Sbjct: 62 INHFKINSNWFLVDLPGYGYAKVSKKTKGVFQKFITEYFEKRRQLVSAFVLIDIRHEAQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ +LG++ IP ++FTK DK K K P+ + ++L+ G ++ PP+ +T
Sbjct: 122 IDLEFMEYLGESGIPFAIIFTKADKVGKT----KVPQLVADYKKQLLSGIWEEMPPYFIT 177
Query: 284 SSVTNQGRDEILLHM 298
SS GRDE+L ++
Sbjct: 178 SSEDKTGRDEVLNYI 192
>gi|380695227|ref|ZP_09860086.1| GTP-binding protein YsxC [Bacteroides faecis MAJ27]
Length = 202
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 125/198 (63%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ CP+ PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITSAEFVISNTDVRKCPTGVFPEYAFIGRSNVGKSSLINMLTARKGLAMTSATPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN SWYLVDLPGYGYA ++ + +DY L R + ++F+LID+ + +
Sbjct: 62 INHFLINQSWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP +++FTK DK K G R + N+N + + ++ PP+ ++
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKLK-----GGRLKMNINAYLRELGKQWEELPPYFVS 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR EIL ++ +
Sbjct: 177 SSEDRTGRTEILDYIENI 194
>gi|402831093|ref|ZP_10879786.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
CM59]
gi|402283142|gb|EJU31664.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
CM59]
Length = 199
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 126/198 (63%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ QA FV S+ + CP+ LPE+A +GRSNVGKSSL+N L K LA TS PGKTQ
Sbjct: 2 EIKQASFVVSNTQVAKCPTHKLPEYAFIGRSNVGKSSLINMLTNHKGLAKTSSKPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +WYLVDLPGYGYA ++ + + +F DYF R LV F+L+D +
Sbjct: 62 INHFLINKNWYLVDLPGYGYAQVSKQSKKTFQQFITDYFKKRKELVCAFVLVDIRHEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP ++FTK DK K E+++ +Q+++ ++ PP+ +T
Sbjct: 122 IDLEFMLWLGENAIPFAIIFTKADKL-----APKVIEQHVLTYQKILLESWEEIPPYFIT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS + G++E+L ++ +
Sbjct: 177 SSESKLGKEEVLDYIENI 194
>gi|53713337|ref|YP_099329.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
YCH46]
gi|265763411|ref|ZP_06091979.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
2_1_16]
gi|336409727|ref|ZP_08590209.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
2_1_56FAA]
gi|375358460|ref|YP_005111232.1| putative GTP-binding cell division protein [Bacteroides fragilis
638R]
gi|383118319|ref|ZP_09939061.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
3_2_5]
gi|423257653|ref|ZP_17238576.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
CL07T00C01]
gi|423265380|ref|ZP_17244383.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
CL07T12C05]
gi|423267971|ref|ZP_17246943.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
CL05T00C42]
gi|423274575|ref|ZP_17253522.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
CL05T12C13]
gi|423285825|ref|ZP_17264706.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
HMW 615]
gi|81382646|sp|Q64UN4.1|ENGB_BACFR RecName: Full=Probable GTP-binding protein EngB
gi|52216202|dbj|BAD48795.1| putative GTP-binding protein [Bacteroides fragilis YCH46]
gi|251945595|gb|EES86002.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
3_2_5]
gi|263256019|gb|EEZ27365.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
2_1_16]
gi|301163141|emb|CBW22690.1| putative GTP-binding cell division protein [Bacteroides fragilis
638R]
gi|335946108|gb|EGN07914.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
2_1_56FAA]
gi|387778021|gb|EIK40117.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
CL07T00C01]
gi|392703038|gb|EIY96182.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
CL07T12C05]
gi|392704939|gb|EIY98071.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
CL05T00C42]
gi|392705601|gb|EIY98731.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
CL05T12C13]
gi|404578509|gb|EKA83230.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
HMW 615]
Length = 201
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 127/198 (64%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP+ PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITNAEFVISNTDVKKCPAGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN+SWYLVDLPGYGYA ++ + +DY L R + ++F+LID+ + +
Sbjct: 62 INHFLINNSWYLVDLPGYGYARRGQKGQEQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP ++FTK DK K G R + N++ + ++ ++ PP+ +T
Sbjct: 122 IDLEFMEWLGENGIPFAIIFTKADKLK-----GGRLKINISAYLRELRKQWEELPPYFIT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR E+L ++ +
Sbjct: 177 SSEERLGRTEVLNYIESI 194
>gi|60681583|ref|YP_211727.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
NCTC 9343]
gi|81315351|sp|Q5LDL2.1|ENGB_BACFN RecName: Full=Probable GTP-binding protein EngB
gi|60493017|emb|CAH07797.1| putative GTP-binding cell division protein [Bacteroides fragilis
NCTC 9343]
Length = 201
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 127/198 (64%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP+ PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITNAEFVISNTDVKKCPAGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN+SWYLVDLPGYGYA ++ + +DY L R + ++F+LID+ + +
Sbjct: 62 INHFLINNSWYLVDLPGYGYARRGQKGQKQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP ++FTK DK K G R + N++ + ++ ++ PP+ +T
Sbjct: 122 IDLEFMEWLGENGIPFAIIFTKADKLK-----GGRLKINISAYLRELRKQWEELPPYFIT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR E+L ++ +
Sbjct: 177 SSEERLGRTEVLNYIESI 194
>gi|300774436|ref|ZP_07084299.1| ribosome biogenesis GTP-binding protein YsxC [Chryseobacterium
gleum ATCC 35910]
gi|300506251|gb|EFK37386.1| ribosome biogenesis GTP-binding protein YsxC [Chryseobacterium
gleum ATCC 35910]
Length = 217
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 134/215 (62%), Gaps = 6/215 (2%)
Query: 94 IVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLAL 153
+ SK + AEFVKSS + ++CP +PE+A +GRSNVGKSSL+N+++ K LA
Sbjct: 2 VYFSKIHSKMIIKTAEFVKSSGKWQECPEPNIPEYAFIGRSNVGKSSLINAMMNHKDLAK 61
Query: 154 TSKTPGKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFL 213
TS+TPGKTQ INHF +N++WYL DLPGYGYA + R D++K +Y LNR LV++F+
Sbjct: 62 TSQTPGKTQLINHFLVNENWYLTDLPGYGYAKVSKVQRKDFEKLITNYILNRRNLVNLFV 121
Query: 214 LIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF 273
L+D + IDLE+ W G++ IP ++VFTK DK K +N+ D++ +
Sbjct: 122 LVDVRHTPQKIDLEFIQWCGESGIPFSIVFTKADKLKPNA-----VIKNVEDYKAELHKT 176
Query: 274 FQTAPPWIMTSSVTNQGRDEILLHMAQLRNYWLKH 308
++ P +TS+ +G D+I L Q N +L H
Sbjct: 177 WEDLPELYITSAEKKEGGDKI-LDFIQKTNEFLTH 210
>gi|423218178|ref|ZP_17204674.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides caccae
CL03T12C61]
gi|392627681|gb|EIY21716.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides caccae
CL03T12C61]
Length = 201
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 126/198 (63%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP+ PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITSAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTARKGLAMTSATPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +WYLVDLPGYGYA ++ + +DY L R + ++F+LID+ + +
Sbjct: 62 INHFLINKNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQN 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP +++FTK DK K G R + N+N + + ++ PP+ ++
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKLK-----GGRLKMNINAYLRELSKQWEELPPYFIS 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR EIL ++ +
Sbjct: 177 SSENRTGRTEILNYIENI 194
>gi|402494456|ref|ZP_10841197.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Aquimarina
agarilytica ZC1]
Length = 204
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 128/204 (62%), Gaps = 5/204 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+++ A+FV S+ CPS+ PE+A +GRSNVGKSSL+N+L++RK LA TS PGKTQ
Sbjct: 2 KISSADFVISNSDVARCPSNPFPEYAFIGRSNVGKSSLINALMKRKSLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +W+LVDLPGYGYA + + + KF +YF R+ LVS F+L+D +
Sbjct: 62 INHFLINKNWFLVDLPGYGYARTSKSTKKTFQKFITNYFKQRTQLVSAFVLVDCRHEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDL + WL N +P ++FTK DK +++ +++ + F++ PP+ +T
Sbjct: 122 IDLAFMEWLATNSVPFFIIFTKADKLTPNT-----LPKHIENYKNKMLEFWEEMPPYFIT 176
Query: 284 SSVTNQGRDEILLHMAQLRNYWLK 307
SS + QG DE+L H+ L + K
Sbjct: 177 SSSSKQGCDEVLAHIDHLNQAFFK 200
>gi|153806695|ref|ZP_01959363.1| hypothetical protein BACCAC_00966 [Bacteroides caccae ATCC 43185]
gi|149131372|gb|EDM22578.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides caccae
ATCC 43185]
Length = 201
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 126/198 (63%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP+ PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITSAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTARKGLAMTSATPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +WYLVDLPGYGYA ++ + +DY L R + ++F+LID+ + +
Sbjct: 62 INHFLINKNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQN 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP +++FTK DK K G R + N+N + + ++ PP+ ++
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKLK-----GGRLKMNVNAYLRELSKQWEELPPYFIS 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR EIL ++ +
Sbjct: 177 SSENRTGRTEILNYIENI 194
>gi|384097564|ref|ZP_09998685.1| GTP-binding protein YsxC [Imtechella halotolerans K1]
gi|383837532|gb|EID76932.1| GTP-binding protein YsxC [Imtechella halotolerans K1]
Length = 201
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/201 (43%), Positives = 131/201 (65%), Gaps = 6/201 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ CP + +PE+A +GRSNVGKSSL+N L +RK LA TS PGKTQ
Sbjct: 2 EIKSAEFVMSNSDVGKCPKEPIPEYAFIGRSNVGKSSLINMLTQRKGLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF+IN++W+LVDLPGYGYA + ++ + KF YF R LVS F+LID +
Sbjct: 62 INHFKINNNWFLVDLPGYGYARVSKSMKNTFQKFITQYFEKRQQLVSAFVLIDIRHEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQ-ELIQGFFQTAPPWIM 282
IDLE+ W+G++QIP +++FTK DK K + ++ +++ +L++ ++ P + +
Sbjct: 122 IDLEFMQWMGEHQIPFSIIFTKADKLKPGA-----IQRHVKEYESKLLEDAWEEMPNYFI 176
Query: 283 TSSVTNQGRDEILLHMAQLRN 303
TSS GRD++L ++ + N
Sbjct: 177 TSSSNFTGRDQLLKYIEDINN 197
>gi|329955112|ref|ZP_08296093.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides clarus
YIT 12056]
gi|328526402|gb|EGF53417.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides clarus
YIT 12056]
Length = 202
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 122/198 (61%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ CP PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITNAEFVISNTDVTKCPGGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN SWY+VDLPGYGYA ++ + + + Y L R + ++F+L+D+ +
Sbjct: 62 INHFLINKSWYIVDLPGYGYAKRGQKGQEQIQRIIETYILQREQMTNLFVLVDSRHEPQA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDL + WLG+N +P +VFTK DK K G R N+ + E + ++ PP+ +T
Sbjct: 122 IDLAFIEWLGENGVPFAIVFTKADKLK-----GGRINSNIRHYLEKLHEQWEELPPYFVT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GRDE+L ++ Q+
Sbjct: 177 SSENRMGRDELLGYIEQI 194
>gi|294673629|ref|YP_003574245.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella ruminicola
23]
gi|294471615|gb|ADE81004.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella ruminicola
23]
Length = 200
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 125/198 (63%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +AEF S+ CP D PE+A +GRSNVGKSSL+N L +K LA TS TPGKT
Sbjct: 2 EIKKAEFTLSAPMESMCPKDTKPEYAFIGRSNVGKSSLINMLTGKKNLAKTSATPGKTLL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN+ WYLVDLPGYG+A ++ ++ Y L R LV+VFLLID + A+
Sbjct: 62 INHFIINNEWYLVDLPGYGFAKRSKKEVQKLEQMINGYILQREQLVNVFLLIDIRLEAQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ W+G + +P ++FTK DK + +NLN +++++ ++ PP +T
Sbjct: 122 IDLEFMEWMGTSSVPFAIIFTKADKL-----SASKVLQNLNAYKKVLSETWEELPPIFVT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS QGRDE+L ++ Q+
Sbjct: 177 SSEKKQGRDEVLDYIEQI 194
>gi|325280017|ref|YP_004252559.1| GTP-binding protein engB [Odoribacter splanchnicus DSM 20712]
gi|324311826|gb|ADY32379.1| GTP-binding protein engB [Odoribacter splanchnicus DSM 20712]
Length = 204
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 125/200 (62%), Gaps = 5/200 (2%)
Query: 102 DAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
+ + +AEFV S+ E CP E+A +GRSNVGKSSL+N L KKLA T+ PGKT
Sbjct: 4 NMDIVKAEFVVSNATVEKCPKPDRHEYAFIGRSNVGKSSLINMLTNNKKLAKTAARPGKT 63
Query: 162 QCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
Q INHF IND WY+VDLPGYGYA R ++K +DY L R LV +F+LID+ +
Sbjct: 64 QLINHFLINDMWYMVDLPGYGYARTSETARRQFEKMIRDYILKRENLVCLFVLIDSRLEP 123
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
+ IDLE+ WLG+N +P ++FTK DK + + ++D+ +++ ++T P
Sbjct: 124 QKIDLEFMEWLGENGVPFVMIFTKADKL-----SATQRLKCIDDYHKVMLETWETTPMAF 178
Query: 282 MTSSVTNQGRDEILLHMAQL 301
MTSS GR+E+L ++ +L
Sbjct: 179 MTSSEKRLGREEVLDYIDEL 198
>gi|373957459|ref|ZP_09617419.1| GTP-binding protein engB [Mucilaginibacter paludis DSM 18603]
gi|373957494|ref|ZP_09617454.1| GTP-binding protein engB [Mucilaginibacter paludis DSM 18603]
gi|373894059|gb|EHQ29956.1| GTP-binding protein engB [Mucilaginibacter paludis DSM 18603]
gi|373894094|gb|EHQ29991.1| GTP-binding protein engB [Mucilaginibacter paludis DSM 18603]
Length = 215
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/199 (44%), Positives = 129/199 (64%), Gaps = 5/199 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V A+FV S+ + P PE+A +GRSNVGKSSL+N LV +K LA TS+TPGKTQ I
Sbjct: 3 VKSADFVCSNTQVSKLPPAVKPEYAFIGRSNVGKSSLINMLVDKKGLAKTSQTPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IND+WYLVDLPGYGYA + + DW+KF + Y R +L +VF+LID+ + + I
Sbjct: 63 NHFLINDNWYLVDLPGYGYARISKSKKEDWNKFIRTYLDKRESLQTVFVLIDSRLEPQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DLE+ +WLG+ + L+FTK DK+ + K ++N++ F++ + F+ P +TS
Sbjct: 123 DLEFCNWLGEKGLSFALIFTKADKQSRVK-----TDQNVSAFKKALLTTFEDIPTIFITS 177
Query: 285 SVTNQGRDEILLHMAQLRN 303
+ GR+E+L + + N
Sbjct: 178 AELQTGREEVLNFVGSINN 196
>gi|329964825|ref|ZP_08301833.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fluxus
YIT 12057]
gi|328524466|gb|EGF51534.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fluxus
YIT 12057]
Length = 201
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 128/198 (64%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+++ AEFV S+ E CP+ PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EISNAEFVISNTDVEKCPAGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSSTPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +WYLVDLPGYGYA ++ + + + Y L R + ++F+LID+ + +
Sbjct: 62 INHFLINKNWYLVDLPGYGYAKRGQKGQEQIQRIIESYILRRKQMTNLFVLIDSRLDPQA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDL++ WLG+N IP ++VFTK DK K G R ++N + + + ++ PP+ +T
Sbjct: 122 IDLDFIEWLGENGIPFSIVFTKADKLK-----GGRLNTHINLYLKKLHEQWEELPPYFVT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR E+L ++ ++
Sbjct: 177 SSENRMGRKELLDYIEKI 194
>gi|393787971|ref|ZP_10376102.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides nordii
CL02T12C05]
gi|392656184|gb|EIY49823.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides nordii
CL02T12C05]
Length = 201
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 127/198 (64%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+++ AEF+ S+ + CP LPE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EISNAEFIVSNTDVKKCPPGHLPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF INDSW +VDLPGYGYA + + +DY L R + ++FLLID+ + +
Sbjct: 62 INHFLINDSWCIVDLPGYGYARRGMKGQEQIRTIIEDYILEREQMTNLFLLIDSRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
ID+E+ WLG+N IP +++FTK DK K G R + N+N + ++ ++ PP+ ++
Sbjct: 122 IDMEFMEWLGENGIPFSIIFTKADKLK-----GGRLKMNINAYIRELRKQWEELPPYFVS 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR EIL ++ +
Sbjct: 177 SSEDRMGRTEILDYIESI 194
>gi|365121996|ref|ZP_09338904.1| ribosome biogenesis GTP-binding protein YsxC [Tannerella sp.
6_1_58FAA_CT1]
gi|363643541|gb|EHL82856.1| ribosome biogenesis GTP-binding protein YsxC [Tannerella sp.
6_1_58FAA_CT1]
Length = 201
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 123/200 (61%), Gaps = 5/200 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A F+ S+ CPS LPE+A +GRSNVGKSSL+N L +K LA+TS PGKTQ
Sbjct: 2 EIKSARFIISNTDVTKCPSGNLPEYAFIGRSNVGKSSLINMLTNKKGLAMTSSMPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IND+WYLVDLPGYGYA +E R + Y LNR + +F+LID +
Sbjct: 62 INHFLINDAWYLVDLPGYGYAQRGKEGREKIRSIIESYILNRYEMTCLFVLIDCRHEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
ID+E+ WLG+N+IP +VFTK DK G R +EN+ ++ + ++ PP T
Sbjct: 122 IDVEFLEWLGENEIPFCIVFTKADKL-----GPVRFKENVEAYKNRLLEDWEELPPVFYT 176
Query: 284 SSVTNQGRDEILLHMAQLRN 303
SS QGR E+L ++ + +
Sbjct: 177 SSEKKQGRTELLDYIGSIND 196
>gi|372209967|ref|ZP_09497769.1| GTP-binding protein YsxC [Flavobacteriaceae bacterium S85]
Length = 205
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 127/199 (63%), Gaps = 6/199 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
Q+ AEFV S+ CPS+ +PE+A +GRSNVGKSSL+N L R KLA TS TPGKTQ
Sbjct: 2 QIKSAEFVISNSEVSKCPSENIPEYAFIGRSNVGKSSLINMLTGRNKLAKTSSTPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF+IN++W+LVDLPGYGYA + + ++ F YF R LV F+LID+ +
Sbjct: 62 INHFKINNNWFLVDLPGYGYAKVSKSTKKEFQSFITSYFKQRKELVCTFVLIDSRHSPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQE-LIQGFFQTAPPWIM 282
ID+++ +L +N+IP ++FTK DK K K +N+ ++E +++G + P +
Sbjct: 122 IDVDFMEFLAENEIPFCMIFTKTDKLKP-----KAIAQNITKYKESMLKGNWAAFPTYFT 176
Query: 283 TSSVTNQGRDEILLHMAQL 301
+SS G++EIL + Q+
Sbjct: 177 SSSTHKNGKEEILHFIDQV 195
>gi|163752987|ref|ZP_02160111.1| GTP-binding protein [Kordia algicida OT-1]
gi|161326719|gb|EDP98044.1| GTP-binding protein [Kordia algicida OT-1]
Length = 202
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/199 (44%), Positives = 129/199 (64%), Gaps = 6/199 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ CP + +PE+A +GRSNVGKSSL+N L +RK LA TS PGKTQ
Sbjct: 2 KIKSAEFVMSNSDVAKCPRNKIPEYAFIGRSNVGKSSLINMLTQRKSLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF+IND W+LVDLPGYGYA + + + KF +YF R+ LV F+L+D +
Sbjct: 62 INHFKINDEWFLVDLPGYGYARVSKSAKKVFQKFITEYFRKRTQLVCGFVLVDIRHEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQE-LIQGFFQTAPPWIM 282
+DLE+ WLG+NQIP +VFTK DK + + ++++N ++E L++ ++ P +
Sbjct: 122 VDLEFMQWLGENQIPFCIVFTKADKLRPSQ-----IDKHVNAYREKLLEDVWEEMPQHFV 176
Query: 283 TSSVTNQGRDEILLHMAQL 301
TSS GR+E+L + Q+
Sbjct: 177 TSSSKAIGREELLDFIGQI 195
>gi|255691813|ref|ZP_05415488.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
finegoldii DSM 17565]
gi|260622531|gb|EEX45402.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
finegoldii DSM 17565]
Length = 201
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 125/198 (63%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP+ PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITSAEFVISNTDVKKCPAGTFPEYAFIGRSNVGKSSLINMLTARKGLAMTSATPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +WYLVDLPGYGYA ++ + +DY L R + ++FLLID+ + +
Sbjct: 62 INHFLINKNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFLLIDSRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP +++FTK DK K R + N+N + + ++ PP+ ++
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKLK-----SGRLKMNINAYLRELSKQWEELPPYFIS 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR EIL ++ +
Sbjct: 177 SSENRTGRTEILDYIESI 194
>gi|256819259|ref|YP_003140538.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
ochracea DSM 7271]
gi|256580842|gb|ACU91977.1| GTP-binding protein HSR1-related [Capnocytophaga ochracea DSM 7271]
Length = 200
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 125/197 (63%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +AEFV S+ + CP D LPE+A +GRSNVGKSSL+N L K LA TS PGKTQ I
Sbjct: 2 IKKAEFVMSNSQVSKCPKDNLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLI 61
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF+I++SW+LVDLPGYGYA +E + + +F YF R LV F+L+D + I
Sbjct: 62 NHFKIDNSWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHEPQKI 121
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D+E+ WLG++ IP +VFTK DK K E N+ +Q+++ ++ PP+ +TS
Sbjct: 122 DVEFMQWLGEHGIPFAIVFTKADKLKPLA-----IERNIAAYQQVLLETWEEFPPYFITS 176
Query: 285 SVTNQGRDEILLHMAQL 301
+ G++E+ ++ Q+
Sbjct: 177 AENKTGKEELTHYIEQI 193
>gi|374595533|ref|ZP_09668537.1| GTP-binding protein engB [Gillisia limnaea DSM 15749]
gi|373870172|gb|EHQ02170.1| GTP-binding protein engB [Gillisia limnaea DSM 15749]
Length = 200
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 125/204 (61%), Gaps = 5/204 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +EFV S+ CP LPE+A +GRSNVGKSSL+N L RK LA TS PGKTQ
Sbjct: 2 KIKSSEFVISNSEVSKCPDSKLPEYAFIGRSNVGKSSLINMLTARKSLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN W+LVDLPGYGYA + ++ + KF YF R ++ F+LID+ A+
Sbjct: 62 INHFLINSEWHLVDLPGYGYARVSKSIKNTFQKFITAYFEQREQMLCAFVLIDSRHNAQA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG++ IP ++FTK DK K K N+ ++ + F++ P +T
Sbjct: 122 IDLEFMQWLGEHSIPFCIIFTKADKLKPKA-----LVRNIEAYKNKMLEFWEEMPKHFIT 176
Query: 284 SSVTNQGRDEILLHMAQLRNYWLK 307
S+ + GR+E+L ++ L N ++K
Sbjct: 177 SAESGVGREEVLEYIENLNNQFIK 200
>gi|399925393|ref|ZP_10782751.1| GTP-binding protein YsxC, partial [Myroides injenensis M09-0166]
Length = 204
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 131/209 (62%), Gaps = 12/209 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ CP++ +PE+A +GRSNVGKSSL+N L K LA TS PGKTQ
Sbjct: 2 KINTAEFVVSNSEASKCPNEPIPEYAFIGRSNVGKSSLINMLTNSKYLAKTSSRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF+IN +WYLVDLPGYGYA ++ ++ + KF DYF R LVS F+LID A+
Sbjct: 62 INHFKINSNWYLVDLPGYGYAKVSKKTKSVFQKFITDYFEKRQQLVSAFVLIDIRHEAQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK----NGGKRPEENLNDFQELIQGFFQTAPP 279
IDLE+ +LG+++IP +++FTK DK K+K + N++ E+ PP
Sbjct: 122 IDLEFMQYLGESEIPFSIIFTKADKVGKQKVHSLVAAYKKAMLANNWAEM--------PP 173
Query: 280 WIMTSSVTNQGRDEILLHMAQLRNYWLKH 308
+ +TSS GRD++L ++ ++ K+
Sbjct: 174 YFVTSSEHKTGRDDVLDYIDEVNQEVFKN 202
>gi|325104688|ref|YP_004274342.1| ribosome biogenesis GTP-binding protein YsxC [Pedobacter saltans
DSM 12145]
gi|324973536|gb|ADY52520.1| ribosome biogenesis GTP-binding protein YsxC [Pedobacter saltans
DSM 12145]
Length = 216
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 127/201 (63%), Gaps = 5/201 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ AEF S+ + P LPE+A +GRSNVGKSSL+N L K LA TS+ PGKTQ I
Sbjct: 3 IKSAEFTVSNTKISKLPPCVLPEYAFIGRSNVGKSSLINMLTDVKGLAKTSQKPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN WYLVDLPGYGYA + + R +W KF K+Y R +L VF+LID+ + + I
Sbjct: 63 NHFLINKEWYLVDLPGYGYARSSKSNRLEWAKFIKNYLEKRESLQCVFVLIDSRLEPQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D+E+ +LG+ IP L+FTK D KNG + ++N++ F++ + F+ P ++TS
Sbjct: 123 DIEFCCYLGERGIPFILIFTKAD-----KNGVNKSQQNMSAFKKEMLKHFEEVPQMLLTS 177
Query: 285 SVTNQGRDEILLHMAQLRNYW 305
S T G++E+L + + ++
Sbjct: 178 SETKFGKEEVLSFIQDVNQHF 198
>gi|404485029|ref|ZP_11020233.1| ribosome biogenesis GTP-binding protein YsxC [Barnesiella
intestinihominis YIT 11860]
gi|404340034|gb|EJZ66465.1| ribosome biogenesis GTP-binding protein YsxC [Barnesiella
intestinihominis YIT 11860]
Length = 201
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 123/192 (64%), Gaps = 5/192 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A FV SS +DCPS GLPE+A +GRSNVGKSSL+N L +K LA+TS TPGKT
Sbjct: 2 EIKNARFVISSSHVKDCPSHGLPEYAFIGRSNVGKSSLINMLTCKKGLAMTSSTPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF ++DSWYLVDLPGYGYA +E R + + Y L R + +F+L+D +
Sbjct: 62 INHFLVDDSWYLVDLPGYGYARRGKESREALREMIEGYVLYRKEMTCLFVLLDCRHKPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N +P +VFTK D K G +E++ +++++ ++ PP T
Sbjct: 122 IDLEFMEWLGENSVPFAIVFTKTD-----KIGPVVLKEHIEYYKQVLHESWEELPPIFAT 176
Query: 284 SSVTNQGRDEIL 295
SS +GR+E+L
Sbjct: 177 SSEKRRGREELL 188
>gi|146299560|ref|YP_001194151.1| ribosome biogenesis GTP-binding protein YsxC [Flavobacterium
johnsoniae UW101]
gi|189037178|sp|A5FIZ1.1|ENGB_FLAJ1 RecName: Full=Probable GTP-binding protein EngB
gi|146153978|gb|ABQ04832.1| GTP-binding protein, HSR1-related [Flavobacterium johnsoniae UW101]
Length = 210
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 131/209 (62%), Gaps = 12/209 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEF+ S+ CP D LPE+A +GRSNVGKSSL+N + K LA TS PGKTQ
Sbjct: 2 KINTAEFIVSNSDAAKCPKDFLPEYAFIGRSNVGKSSLINMITNHKNLAKTSGKPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF+IN++W+LVDLPGYGYA ++ ++ + +F DYF NR LV F+LID A+
Sbjct: 62 INHFKINNNWFLVDLPGYGYAKVSKKTKSIFQQFITDYFENREQLVCAFVLIDIRHEAQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK----NGGKRPEENLNDFQELIQGFFQTAPP 279
ID+E+ S++G+++IP ++FTK DK K K R + N++ E+ P
Sbjct: 122 IDIEFMSYMGESEIPFCIIFTKADKISKGKIDSHIAAYRKQMYANNWAEM--------PQ 173
Query: 280 WIMTSSVTNQGRDEILLHMAQLRNYWLKH 308
+ +TSS + G+DE+L ++ ++ K+
Sbjct: 174 YFVTSSTESIGKDELLTYIDEVNQEVFKN 202
>gi|399023372|ref|ZP_10725433.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Chryseobacterium
sp. CF314]
gi|398083067|gb|EJL73798.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Chryseobacterium
sp. CF314]
Length = 207
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 130/200 (65%), Gaps = 5/200 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ A FVKSS + ++CP +PE+A +GRSNVGKSSL+N+++ K LA TS TPGKTQ I
Sbjct: 3 IKTATFVKSSGKWQECPEPNIPEYAFIGRSNVGKSSLINAMMNHKDLAKTSGTPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF +ND+WYL DLPGYGYA + +R D++K +Y LNR LV++F+L+D + I
Sbjct: 63 NHFLVNDTWYLTDLPGYGYAKVSKVIRKDFEKLITNYILNRKNLVNLFVLVDIRHTPQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D+E+ W G++ IP ++VFTK DK K +N+ ++++ + ++ P +TS
Sbjct: 123 DMEFIQWCGESGIPFSIVFTKADKLKP-----NVAIKNVEEYKKELHKTWEDLPELYVTS 177
Query: 285 SVTNQGRDEILLHMAQLRNY 304
+ +G DEIL + + ++
Sbjct: 178 AEKKEGGDEILSFIQKTNDF 197
>gi|427383039|ref|ZP_18879759.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
oleiciplenus YIT 12058]
gi|425729490|gb|EKU92342.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
oleiciplenus YIT 12058]
Length = 200
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 86/198 (43%), Positives = 128/198 (64%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITSAEFVISNTDVKKCPPGIFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN+SWY+VDLPGYGYA ++ +T + +DY L R + ++FLLID+ + +
Sbjct: 62 INHFLINNSWYIVDLPGYGYARRGQKGKTQIQRIIEDYILEREQMTNLFLLIDSRLDPQT 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
ID+E+ WLG++ +P ++VFTK DK K G R N+ + + ++ ++ PP+ +T
Sbjct: 122 IDIEFMEWLGEHGVPFSIVFTKGDKLK-----GGRLNINIQQYLKKLKEQWEELPPYFVT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS G+ E+L ++ +
Sbjct: 177 SSENRMGKKELLDYIESI 194
>gi|390954602|ref|YP_006418360.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Aequorivita
sublithincola DSM 14238]
gi|390420588|gb|AFL81345.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Aequorivita
sublithincola DSM 14238]
Length = 203
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 124/198 (62%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+ +EF+ S+ CP D LPE+A +GRSNVGKSSL+N L+ RK LA TS PGKTQ
Sbjct: 2 HIKSSEFLMSNSDVTKCPKDRLPEYAFIGRSNVGKSSLINMLMLRKSLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN SWYLVDLPGYGYA + + + KF +YF R +V F+L+D +P
Sbjct: 62 INHFIINKSWYLVDLPGYGYARVSKSSKKVFQKFITNYFEKREQMVLAFVLVDCRHEPQP 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ W+G++ IP ++FTK DK K K E N+ + + + ++ P + +T
Sbjct: 122 IDLEFMEWMGESGIPFNIIFTKADKEKPKA-----LERNIEVYTKKMLETWEEMPQYFVT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
S+ + GRDE+L ++ +L
Sbjct: 177 SASESTGRDEVLKYINKL 194
>gi|315224700|ref|ZP_07866523.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
ochracea F0287]
gi|420160119|ref|ZP_14666908.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
ochracea str. Holt 25]
gi|314945328|gb|EFS97354.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
ochracea F0287]
gi|394761107|gb|EJF43544.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
ochracea str. Holt 25]
Length = 201
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 125/197 (63%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +AEFV S+ + CP + LPE+A +GRSNVGKSSL+N L K LA TS PGKTQ I
Sbjct: 2 IKKAEFVMSNSQVSKCPKENLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLI 61
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF+I++SW+LVDLPGYGYA +E + + +F YF R LV F+L+D + I
Sbjct: 62 NHFKIDNSWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHEPQKI 121
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D+E+ WLG++ IP +VFTK DK K E N+ +Q+++ ++ PP+ +TS
Sbjct: 122 DVEFMQWLGEHSIPFAIVFTKADKLKPLA-----IERNIAAYQQVLLETWEEFPPYFVTS 176
Query: 285 SVTNQGRDEILLHMAQL 301
+ G++E+ ++ Q+
Sbjct: 177 AENKTGKEELTHYIEQI 193
>gi|299145429|ref|ZP_07038497.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
3_1_23]
gi|298515920|gb|EFI39801.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
3_1_23]
Length = 201
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 125/198 (63%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP+ PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITSAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +WYLVDLPGYGYA ++ + +DY L R + ++F+LID+ + +
Sbjct: 62 INHFLINKNWYLVDLPGYGYARRGQKGKDQIHTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP +++FTK DK K G R + N+N + + ++ PP ++
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKLK-----GGRLKMNINAYLRELSKQWEELPPHFVS 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR EIL ++ +
Sbjct: 177 SSEDRMGRMEILNYIENI 194
>gi|412992500|emb|CCO18480.1| ribosome biogenesis GTP-binding protein YsxC [Bathycoccus prasinos]
Length = 353
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 124/203 (61%), Gaps = 6/203 (2%)
Query: 102 DAQVAQAEFVKSSVRTEDCP-SDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGK 160
D ++ + S DCP +GLPE AL+GRSNVGKSSLLN L A+ S PG
Sbjct: 94 DKKLQKVRLTSSVENERDCPPENGLPEIALIGRSNVGKSSLLNMLTEGTSHAIVSANPGT 153
Query: 161 TQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIP 220
T+ INH+ I+ WY+VDLPGYG+A A E WD F K+YF R TL V LLIDASI
Sbjct: 154 TRSINHYLIDAKWYIVDLPGYGFAKATEEEILSWDTFAKNYFKTRQTLCGVLLLIDASIE 213
Query: 221 AKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRP--EENLNDFQELIQGFFQTAP 278
+ DL+YA++L N IP T+VFTKCD++KK G P EEN+ + ++ + P
Sbjct: 214 TQDKDLDYANYLIGNDIPFTIVFTKCDRKKK---GPNTPTVEENIEALENRLEETWHRLP 270
Query: 279 PWIMTSSVTNQGRDEILLHMAQL 301
I TSSV+ +GR +IL ++ +
Sbjct: 271 SIIKTSSVSKEGRGDILKFISSI 293
>gi|313676939|ref|YP_004054935.1| ribosome biogenesis GTP-binding protein ysxc [Marivirga tractuosa
DSM 4126]
gi|312943637|gb|ADR22827.1| ribosome biogenesis GTP-binding protein YsxC [Marivirga tractuosa
DSM 4126]
Length = 203
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 128/205 (62%), Gaps = 5/205 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ P LPE+A +GRSNVGKSSL+N L RK LA TS PGKTQ
Sbjct: 3 RIKNAEFVISNTDYRKSPETDLPEYAFIGRSNVGKSSLINMLTDRKNLAKTSSKPGKTQL 62
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF +++ WYLVDLPGYGYA ++ W K DY NR LV +F+LID+ +P +
Sbjct: 63 INHFLMDEKWYLVDLPGYGYAKVSKKTNEGWGKMISDYLKNRENLVCIFVLIDSRLPPQK 122
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D+E+ ++G+N +P++L+FTK DK+ K ++N+ F++ + ++ PP+ ++
Sbjct: 123 ADVEFLDFIGKNGLPLSLIFTKADKQSNNKT-----QQNIAVFKKKMLNTWEEFPPYFVS 177
Query: 284 SSVTNQGRDEILLHMAQLRNYWLKH 308
S+ G++EIL + Q+ W +
Sbjct: 178 SAEKQTGKEEILGIIDQMNTAWAEQ 202
>gi|429755348|ref|ZP_19288008.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 324 str. F0483]
gi|429174876|gb|EKY16341.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 324 str. F0483]
Length = 201
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 125/197 (63%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +AEFV S+ + CP + LPE+A +GRSNVGKSSL+N L K LA TS PGKTQ I
Sbjct: 2 IKKAEFVMSNSQVSKCPKENLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLI 61
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF+I++SW+LVDLPGYGYA +E + + +F YF R LV F+L+D + I
Sbjct: 62 NHFKIDNSWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHEPQKI 121
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D+E+ WLG++ IP +VFTK DK K E N+ +Q+++ ++ PP+ +TS
Sbjct: 122 DVEFMQWLGEHGIPFAIVFTKADKLKPLA-----IERNIAAYQQVLLETWEEFPPYFITS 176
Query: 285 SVTNQGRDEILLHMAQL 301
+ G++E+ ++ Q+
Sbjct: 177 AENKTGKEELTHYIEQI 193
>gi|213963255|ref|ZP_03391512.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
sputigena Capno]
gi|213954117|gb|EEB65442.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
sputigena Capno]
Length = 201
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 126/200 (63%), Gaps = 11/200 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +AEFV S+ + CP + LPE+A +GRSNVGKSSL+N L K LA TS PGKTQ I
Sbjct: 2 IKKAEFVMSNSQVSKCPKENLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLI 61
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF+I++SW+LVDLPGYGYA +E + + +F YF R LV F+L+D + I
Sbjct: 62 NHFKIDNSWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHEPQKI 121
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRP---EENLNDFQELIQGFFQTAPPWI 281
D+E+ WLG++ IP +VFTK DK K P E N+ +Q+++ ++ PP+
Sbjct: 122 DVEFMQWLGEHGIPFAIVFTKADKLK--------PLVIERNIAAYQQVLLETWEEFPPYF 173
Query: 282 MTSSVTNQGRDEILLHMAQL 301
+TS+ G++E+ ++ Q+
Sbjct: 174 VTSAENKTGKEELTHYIEQI 193
>gi|332878394|ref|ZP_08446117.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 329 str. F0087]
gi|332683659|gb|EGJ56533.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 329 str. F0087]
Length = 200
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 124/196 (63%), Gaps = 5/196 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +AEFV S+ + CP D LPE+A +GRSNVGKSSL+N L K LA TS PGKTQ I
Sbjct: 2 IKKAEFVMSNSQVAKCPKDRLPEYAFIGRSNVGKSSLINMLTNCKNLAKTSGRPGKTQLI 61
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF+I+D W+LVDLPGYGYA + + + +F DYF R LVS F+L+D + I
Sbjct: 62 NHFKIDDRWFLVDLPGYGYARVSKTTKQVFQRFITDYFEQREQLVSAFVLVDIRHEPQKI 121
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D+E+ WLG+ IP ++FTK DK K + E N+ ++E + +++ PP+ +TS
Sbjct: 122 DVEFMQWLGERAIPFAIIFTKADKLKPQA-----IERNVAAYKEALLEWWEEFPPYFVTS 176
Query: 285 SVTNQGRDEILLHMAQ 300
+ G++E+ ++ Q
Sbjct: 177 AQNKTGKEELTQYIEQ 192
>gi|224539566|ref|ZP_03680105.1| hypothetical protein BACCELL_04473 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518800|gb|EEF87905.1| hypothetical protein BACCELL_04473 [Bacteroides cellulosilyticus
DSM 14838]
Length = 201
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 86/198 (43%), Positives = 127/198 (64%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITSAEFVISNTDVKKCPPGIFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN SWY+VDLPGYGYA ++ ++ + +DY L R + ++FLLID+ + +
Sbjct: 62 INHFLINKSWYIVDLPGYGYARRGQKGKSQIQRIIEDYILEREQMTNLFLLIDSRLEPQV 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
ID+E+ WLG++ IP ++VFTK DK K G R N+ + + ++ ++ PP+ +T
Sbjct: 122 IDIEFMGWLGEHGIPFSIVFTKGDKLK-----GGRLNTNIQQYLKKLKEQWEELPPYFVT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS G+ E+L ++ +
Sbjct: 177 SSENRMGKKELLDYIESI 194
>gi|395803407|ref|ZP_10482654.1| GTP-binding protein YsxC [Flavobacterium sp. F52]
gi|395434453|gb|EJG00400.1| GTP-binding protein YsxC [Flavobacterium sp. F52]
Length = 206
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 131/209 (62%), Gaps = 12/209 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEF+ S+ CP D LPE+A +GRSNVGKSSL+N L K LA TS PGKTQ
Sbjct: 2 KINTAEFIVSNSDASKCPKDFLPEYAFIGRSNVGKSSLINMLTNNKNLAKTSARPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF+IN++W+LVDLPGYGYA ++ ++ + KF DYF NR LV F+LID A+
Sbjct: 62 INHFKINNNWFLVDLPGYGYAKVSKKTKSVFQKFITDYFENREQLVCAFVLIDIRHEAQN 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK----NGGKRPEENLNDFQELIQGFFQTAPP 279
ID+E+ S++G+++IP ++FTK DK K K + + N++ E+ P
Sbjct: 122 IDIEFMSYMGESEIPFCIIFTKADKIGKTKIDSHIAAYKKQMFANNWAEM--------PQ 173
Query: 280 WIMTSSVTNQGRDEILLHMAQLRNYWLKH 308
+ +TSS + G++E+L ++ Q+ K+
Sbjct: 174 YFVTSSAESIGKEELLSYIDQVNQEVFKN 202
>gi|198275301|ref|ZP_03207832.1| hypothetical protein BACPLE_01460 [Bacteroides plebeius DSM 17135]
gi|198271884|gb|EDY96154.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides plebeius
DSM 17135]
Length = 203
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 89/197 (45%), Positives = 123/197 (62%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ AEFV S+ R + CP LPE+A +GRSNVGKSSL+N L + KLA+TS TPGKT I
Sbjct: 3 ITSAEFVVSNSRADMCPQTHLPEYAFIGRSNVGKSSLINMLTKNPKLAMTSATPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN WYLVDLPGYGYA +++ K + Y L R + +F+LID+ + + I
Sbjct: 63 NHFLINKEWYLVDLPGYGYAQRGKKMMEKIQKLIEYYVLEREQMTCLFVLIDSRLEPQRI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DLE+ WLG+N IP L+FTK DK+ K ++N F + ++ ++ PP ++S
Sbjct: 123 DLEFIEWLGENGIPFALIFTKADKQSVGKTKA-----SVNRFLDTLKEQWEELPPHFISS 177
Query: 285 SVTNQGRDEILLHMAQL 301
S GR EIL ++ Q+
Sbjct: 178 SENKTGRQEILDYIEQV 194
>gi|393780146|ref|ZP_10368370.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 412 str. F0487]
gi|392608962|gb|EIW91789.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 412 str. F0487]
Length = 199
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 124/197 (62%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +AEFV S+ + CP + LPE+A +GRSNVGKSSL+N L K LA TS PGKTQ I
Sbjct: 2 IKKAEFVMSNSQVSKCPKENLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLI 61
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF+I+ SW+LVDLPGYGYA +E + + +F YF R LV F+L+D + I
Sbjct: 62 NHFKIDSSWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHEPQKI 121
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D+E+ WLG++ IP +VFTK DK K E N+ +Q+++ ++ PP+ +TS
Sbjct: 122 DVEFMQWLGEHSIPFAIVFTKADKLKPLA-----IERNIAAYQQVLLETWEEFPPYFITS 176
Query: 285 SVTNQGRDEILLHMAQL 301
+ G++E+ ++ Q+
Sbjct: 177 AENKTGKEELTHYIEQI 193
>gi|225011603|ref|ZP_03702041.1| GTP-binding protein HSR1-related [Flavobacteria bacterium MS024-2A]
gi|225004106|gb|EEG42078.1| GTP-binding protein HSR1-related [Flavobacteria bacterium MS024-2A]
Length = 205
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 124/199 (62%), Gaps = 6/199 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
Q+ A FV S+ CP+ LPE+A +GRSNVGKSSL+N+L +K LA TS PGKTQ
Sbjct: 2 QIRSATFVISNSDVAKCPNSHLPEYAFIGRSNVGKSSLINALCNKKNLAKTSSRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +W+LVDLPG+GYA + + + KF +YF R LV+ FLLID +P
Sbjct: 62 INHFLINQNWHLVDLPGFGYARVSKTQKKVFQKFVTNYFKERKQLVNAFLLIDIRHDPQP 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQE-LIQGFFQTAPPWIM 282
ID+ + WLG+NQIP +++FTK DK K E N+ + E ++ ++ PP +
Sbjct: 122 IDMNFMEWLGENQIPFSIIFTKADKLKPAAR-----ERNIKAYTEKMLATLWEELPPIFI 176
Query: 283 TSSVTNQGRDEILLHMAQL 301
TSS+ G +EIL ++ L
Sbjct: 177 TSSLHKTGGEEILEYIHSL 195
>gi|383112888|ref|ZP_09933673.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. D2]
gi|313692719|gb|EFS29554.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. D2]
Length = 201
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 124/198 (62%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ CP+ PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITSAEFVISNTDVRKCPAGIFPEYAFIGRSNVGKSSLINMLTNRKGLAMTSATPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +WYLVDLPGYGYA ++ + +DY L R + ++F+LID+ + +
Sbjct: 62 INHFFINKNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP +++FTK DK K G R + N+N + + ++ PP ++
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKLK-----GGRLKININAYLRELSKQWEELPPHFVS 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR EIL ++ +
Sbjct: 177 SSEDRMGRTEILNYIENI 194
>gi|167762858|ref|ZP_02434985.1| hypothetical protein BACSTE_01221 [Bacteroides stercoris ATCC
43183]
gi|167699198|gb|EDS15777.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides stercoris
ATCC 43183]
Length = 202
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/198 (43%), Positives = 122/198 (61%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITSAEFVISNTDVKKCPGGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +WY+VDLPGYGYA ++ + + + Y L R + +F+L+D+ +
Sbjct: 62 INHFLINKNWYIVDLPGYGYAKRGQKGQEQIQRIIETYILQREQMTCLFVLVDSRHEPQA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDL + WLG+N +P +VFTK DK K G R N+ + E ++ ++ PP +T
Sbjct: 122 IDLAFIEWLGENGVPFAIVFTKADKLK-----GGRINSNIRHYLEKLREQWEELPPHFIT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GRDE+L ++ Q+
Sbjct: 177 SSENRMGRDELLGYIEQI 194
>gi|429748081|ref|ZP_19281298.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 380 str. F0488]
gi|429161414|gb|EKY03819.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 380 str. F0488]
Length = 199
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 126/200 (63%), Gaps = 11/200 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +AEFV S+ + CP + LPE+A +GRSNVGKSSL+N L K LA TS PGKTQ I
Sbjct: 2 IKKAEFVMSNSQVSKCPKENLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLI 61
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF+I++SW+LVDLPGYGYA +E + + +F YF R LV F+L+D + I
Sbjct: 62 NHFKIDNSWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHEPQKI 121
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRP---EENLNDFQELIQGFFQTAPPWI 281
D+E+ WLG++ IP +VFTK DK K P E N+ +Q+++ ++ PP+
Sbjct: 122 DVEFMQWLGEHGIPFAVVFTKADKLK--------PLVIERNIAAYQQVLLETWEEFPPYF 173
Query: 282 MTSSVTNQGRDEILLHMAQL 301
+TS+ G++E+ ++ Q+
Sbjct: 174 VTSAENKTGKEELTHYIEQI 193
>gi|229496828|ref|ZP_04390537.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas
endodontalis ATCC 35406]
gi|229316239|gb|EEN82163.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas
endodontalis ATCC 35406]
Length = 198
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 125/194 (64%), Gaps = 5/194 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ AEFVKSS + + CP LPE+A +GRSNVGKSSL+N L KLA+TS PGKTQ I
Sbjct: 3 IKTAEFVKSSAQLDQCPESKLPEYAFIGRSNVGKSSLINMLTGHTKLAMTSSKPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN W+LVDLPGYGYAA +E R + + + Y L R L+++F+L+D+ + + I
Sbjct: 63 NHFLINKDWHLVDLPGYGYAARNKEQRLAFRRMIEGYILGRKQLINLFILVDSRLEPQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DLE+ +G+ +P+++V TK DK + K +E++ +QE + + PP+ TS
Sbjct: 123 DLEFIQQMGEAGVPLSIVMTKIDKLSRPK-----LQESIKRYQETLSEEWDELPPFFYTS 177
Query: 285 SVTNQGRDEILLHM 298
S GR+E+L ++
Sbjct: 178 SEKATGREELLQYI 191
>gi|224024430|ref|ZP_03642796.1| hypothetical protein BACCOPRO_01155 [Bacteroides coprophilus DSM
18228]
gi|224017652|gb|EEF75664.1| hypothetical protein BACCOPRO_01155 [Bacteroides coprophilus DSM
18228]
Length = 204
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 127/200 (63%), Gaps = 5/200 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ R + CP+ LPE+A +GRSNVGKSSL+N L ++ KLA+TS TPGKT
Sbjct: 2 EITSAEFVVSNSRADMCPATHLPEYAFIGRSNVGKSSLINMLTKQPKLAMTSATPGKTLL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF +N WYLVDLPGYGYA +++ +K + Y L R + +F+L+D+ + +
Sbjct: 62 INHFLVNKEWYLVDLPGYGYAQRGKKMMDKIEKLIQHYVLEREQMTCLFVLVDSRLAPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
ID+E+ WLG+N +P ++FTK DK+ K N++ + + ++ PP+ ++
Sbjct: 122 IDMEFIEWLGENGVPFAIIFTKADKQSAGKT-----RANVDIYLSELSKQWEELPPYFIS 176
Query: 284 SSVTNQGRDEILLHMAQLRN 303
S+ GR EIL ++ Q+ +
Sbjct: 177 SAEKKTGRKEILDYIEQINH 196
>gi|218130918|ref|ZP_03459722.1| hypothetical protein BACEGG_02519 [Bacteroides eggerthii DSM 20697]
gi|317476229|ref|ZP_07935480.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides eggerthii
1_2_48FAA]
gi|217987262|gb|EEC53593.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides eggerthii
DSM 20697]
gi|316907640|gb|EFV29343.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides eggerthii
1_2_48FAA]
Length = 202
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 122/198 (61%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ CP PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITSAEFVISNTDVNKCPGGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +WY+VDLPGYGYA ++ + + + Y L R + S+F+L+D+ +
Sbjct: 62 INHFLINKNWYIVDLPGYGYARRGQKGQEQIQRIIETYILQREQMTSLFVLVDSRHEPQA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDL + WLG+N +P +VFTK DK K G + N+ + E + ++ PP+ +T
Sbjct: 122 IDLSFIEWLGENGVPFAIVFTKADKLK-----GGKINSNIRHYLEKLHEQWEELPPYFVT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR+E+L ++ Q+
Sbjct: 177 SSENRMGREELLNYIEQI 194
>gi|340620855|ref|YP_004739306.1| putative GTP-binding protein engB [Capnocytophaga canimorsus Cc5]
gi|339901120|gb|AEK22199.1| Probable GTP-binding protein engB [Capnocytophaga canimorsus Cc5]
Length = 198
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 125/200 (62%), Gaps = 11/200 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +AEF+ S+ CP + LPE+A +GRSNVGKSSL+N L K LA TS PGKTQ I
Sbjct: 3 ITKAEFIISNSDVSKCPKEILPEYAFIGRSNVGKSSLINMLTNNKNLAKTSGKPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF+IN++W+LVDLPGYGYA + + + KF YF R L+ F+L+D + I
Sbjct: 63 NHFKINNNWFLVDLPGYGYARVSKSTKKVFQKFITQYFEKRKQLILAFVLVDIRHEPQTI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPE---ENLNDFQELIQGFFQTAPPWI 281
D+++ WLG+NQIP ++FTK DK K PE N+ +++ + F++ P +
Sbjct: 123 DVDFMQWLGENQIPFAIIFTKADKLK--------PEAIKRNVATYRQKMLDFWEEMPTYF 174
Query: 282 MTSSVTNQGRDEILLHMAQL 301
+TSS G++E+L ++ Q+
Sbjct: 175 VTSSSNRMGKEEVLAYIDQI 194
>gi|333382792|ref|ZP_08474458.1| GTP-binding protein engB [Dysgonomonas gadei ATCC BAA-286]
gi|332828393|gb|EGK01102.1| GTP-binding protein engB [Dysgonomonas gadei ATCC BAA-286]
Length = 198
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 121/197 (61%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ A+FV S+ CP DG PE+A +GRSNVGKSSL+N L RK LA+TS PGKTQ I
Sbjct: 3 IRDAQFVVSNTDYRKCPQDGKPEYAFIGRSNVGKSSLINMLTNRKGLAMTSSKPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IND WYLVDLPGYGYA +E R K Y +NR+ L +FLL+D + I
Sbjct: 63 NHFIINDEWYLVDLPGYGYAQRGKEGRDQIRKIIDSYIINRAELTCLFLLLDCRHEPQQI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D+E+ +WLG+ +P +VFTK DK K ++N+ + + ++ ++ PP +S
Sbjct: 123 DIEFMNWLGEEGVPFVIVFTKIDKLSKGA-----LKKNMEAYTDTLKETWEEIPPIFYSS 177
Query: 285 SVTNQGRDEILLHMAQL 301
+ G DEIL ++ Q+
Sbjct: 178 AEHRLGADEILGYIEQI 194
>gi|260063723|ref|YP_003196803.1| GTP-binding cell division protein [Robiginitalea biformata
HTCC2501]
gi|88783168|gb|EAR14341.1| putative GTP-binding cell division protein [Robiginitalea biformata
HTCC2501]
Length = 208
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 121/198 (61%), Gaps = 4/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ CP++ LPE+A +GRSNVGKSSL+N L RK LA S PGKTQ
Sbjct: 2 KIRSAEFVVSNTDVSRCPAEPLPEYAFIGRSNVGKSSLINMLTDRKHLAKISGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHFRIND+W+LVDLPGYGYA ++ + + K YF R L+S FLL+D +P
Sbjct: 62 INHFRINDNWFLVDLPGYGYARTSKKDKAAFQKLIHRYFRERRQLLSAFLLVDIRHEPQP 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WL IP L+FTK DK K G + Q + ++ PP+ +T
Sbjct: 122 IDLEFMEWLTGEGIPFALIFTKADKLKP----GAVSRQTDGYLQAMRNAGWEADPPFFVT 177
Query: 284 SSVTNQGRDEILLHMAQL 301
SS+ G+DE+L ++ ++
Sbjct: 178 SSLKGIGKDEVLAYIGEI 195
>gi|420149698|ref|ZP_14656869.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 335 str. F0486]
gi|394753289|gb|EJF36857.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 335 str. F0486]
Length = 199
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 126/200 (63%), Gaps = 11/200 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +AEFV S+ + CP + LPE+A +GRSNVGKSSL+N L K LA TS PGKTQ I
Sbjct: 2 IKKAEFVMSNSQVSKCPKENLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLI 61
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF+I++SW+LVDLPGYGYA +E + + +F YF R LV F+L+D + I
Sbjct: 62 NHFKIDNSWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHEPQKI 121
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRP---EENLNDFQELIQGFFQTAPPWI 281
D+E+ WLG++ IP +VFTK DK K P E N+ +Q+++ ++ PP+
Sbjct: 122 DVEFMQWLGEHGIPFAIVFTKADKLK--------PLVIERNIVAYQQVLLETWEDFPPYF 173
Query: 282 MTSSVTNQGRDEILLHMAQL 301
+TS+ G++E+ ++ Q+
Sbjct: 174 ITSAENKTGKEELTHYIEQI 193
>gi|409122979|ref|ZP_11222374.1| GTP-binding protein YsxC [Gillisia sp. CBA3202]
Length = 201
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 126/202 (62%), Gaps = 5/202 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +EFV S+ CP+ LPE+A +GRSNVGKSSL+N L RK LA TS PGKTQ I
Sbjct: 3 IKSSEFVVSNSDVAKCPNSKLPEYAFIGRSNVGKSSLINMLTARKSLAKTSGRPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN W+LVDLPGYGYA + ++ + KF YF +R ++ F+LID+ +PI
Sbjct: 63 NHFLINKEWHLVDLPGYGYARVSKSIKKTFQKFITQYFEHREQMLCAFVLIDSRHNPQPI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DLE+ WLG++ IP ++FTK DK K N R N+ ++E + + P + +TS
Sbjct: 123 DLEFMQWLGEHGIPFCIIFTKADKL--KPNALTR---NIEVYKEKMLEIWVEMPVYFVTS 177
Query: 285 SVTNQGRDEILLHMAQLRNYWL 306
S + GR+E+L ++ L N ++
Sbjct: 178 STNDLGREEVLKYIENLNNQFI 199
>gi|120437113|ref|YP_862799.1| ribosome biogenesis GTP-binding protein YsxC [Gramella forsetii
KT0803]
gi|166225957|sp|A0M537.1|ENGB_GRAFK RecName: Full=Probable GTP-binding protein EngB
gi|117579263|emb|CAL67732.1| protein containing GTP binding domain [Gramella forsetii KT0803]
Length = 198
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 132/201 (65%), Gaps = 7/201 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + + CP+ LPE+A +GRSNVGKSSL+N L RK LA TS PGKTQ
Sbjct: 2 KIKTAEFVISNSKVDHCPNSTLPEYAFIGRSNVGKSSLINMLTGRKSLAKTSAKPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN++W+LVDLPGYGYA + + + KF YF R ++ F+LID+ +P
Sbjct: 62 INHFLINNNWHLVDLPGYGYAQVSKSTKKVFQKFITAYFKKREQMICAFVLIDSRHKPQP 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQ-ELIQGFFQTAPPWIM 282
ID+E+ WLG++ IP ++FTK DK K K ++N+ +++ E+++ + + P + +
Sbjct: 122 IDMEFMQWLGEHNIPFCIIFTKADKLKP-----KILDKNIENYKNEMLESWVE-MPEYFI 175
Query: 283 TSSVTNQGRDEILLHMAQLRN 303
TS+ + G+D+IL ++ + N
Sbjct: 176 TSATSKLGQDDILDYIEGINN 196
>gi|89891777|ref|ZP_01203279.1| GTP-binding cell division protein EngB [Flavobacteria bacterium
BBFL7]
gi|89515932|gb|EAS18597.1| GTP-binding cell division protein EngB [Flavobacteria bacterium
BBFL7]
Length = 200
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 124/199 (62%), Gaps = 6/199 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +EFV S+ + CP L E+A +GRSNVGKSSL+N L +K LA TS PGKTQ
Sbjct: 2 KITSSEFVISNQDVKRCPDSKLAEYAFIGRSNVGKSSLINMLTNKKSLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN SW+LVDLPGYGYA + + + KF +YF R LV F+L+D +P
Sbjct: 62 INHFLINKSWHLVDLPGYGYARVSKSSKAKFQKFITNYFQQRRQLVCAFVLVDVRHEPQP 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDF-QELIQGFFQTAPPWIM 282
ID E+ WLG+N IP +VFTK DK K E N+ + ++L+ G ++ PP+ +
Sbjct: 122 IDTEFMEWLGENGIPFGIVFTKADKLKPNA-----LERNVEVYKKQLLDGVWEEVPPYFI 176
Query: 283 TSSVTNQGRDEILLHMAQL 301
TSS G++E+L ++ ++
Sbjct: 177 TSSSNGTGQEELLNYIGEI 195
>gi|313203549|ref|YP_004042206.1| ribosome biogenesis GTP-binding protein ysxc [Paludibacter
propionicigenes WB4]
gi|312442865|gb|ADQ79221.1| ribosome biogenesis GTP-binding protein YsxC [Paludibacter
propionicigenes WB4]
Length = 198
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 120/194 (61%), Gaps = 5/194 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ AEF+ S+ CP LPE+A +GRSNVGKSSL+N L RK LA+TS PGKT I
Sbjct: 3 IKSAEFIISNTDYLKCPDSKLPEYAFIGRSNVGKSSLINMLCNRKDLAMTSSRPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN +W+LVDLPGYGYA A +++R + Y LNR L +FLLID + I
Sbjct: 63 NHFLINKNWHLVDLPGYGYATAGKKMRDQLQDIIESYILNREQLTCLFLLIDCRHEPQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DLE+ WLG+N +P ++VFTK DK K + N+ +++ + ++ PP +TS
Sbjct: 123 DLEFMEWLGENGVPFSIVFTKLDKLTHAKG-----KSNVQAYKDKLSEQWEELPPIFLTS 177
Query: 285 SVTNQGRDEILLHM 298
S GRDEIL ++
Sbjct: 178 SEKRTGRDEILGYI 191
>gi|298484198|ref|ZP_07002363.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. D22]
gi|298269611|gb|EFI11207.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. D22]
Length = 201
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 125/198 (63%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP+ PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITSAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +WYLVDLPGYGYA ++ + +DY L R + ++F+LID+ + +
Sbjct: 62 INHFLINKNWYLVDLPGYGYARRGQKGKNQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP +++FTK DK K G R + N+N + + ++ PP ++
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKLK-----GGRLKMNINAYLRELGKQWEELPPHFVS 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR +IL ++ +
Sbjct: 177 SSEDRTGRMDILNYIENI 194
>gi|409097338|ref|ZP_11217362.1| HSR1-like GTP-binding protein [Pedobacter agri PB92]
Length = 207
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 125/197 (63%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ A FV S+ + P +PE+A +GRSNVGKSSL+N LV + LA TS+ PGKTQ I
Sbjct: 3 IKTATFVCSNTQISALPPPTMPEYAFIGRSNVGKSSLINMLVNQHGLAKTSQRPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF +N+ WY+VDLPGYGYA + R W+KF + Y R +L VF+LID+ + + I
Sbjct: 63 NHFLVNEKWYIVDLPGYGYAKVSKTSREKWEKFIRAYITKRESLQCVFVLIDSRLDPQQI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D+E+ WLG+ QIP +L+FTK DK+ G ++N+ F++ + FF+ P +TS
Sbjct: 123 DIEFCYWLGEKQIPFSLIFTKADKQ-----GMTTTQKNVAAFKKKLGEFFEEIPATFITS 177
Query: 285 SVTNQGRDEILLHMAQL 301
+ G+D++L + ++
Sbjct: 178 AEKGNGKDDVLNFITEV 194
>gi|371778550|ref|ZP_09484872.1| ribosome biogenesis GTP-binding protein YsxC [Anaerophaga sp. HS1]
Length = 199
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 128/200 (64%), Gaps = 11/200 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ A+FVKSS ++CPS PE+A +GRSNVGKSSLLN L +RK LA TS TPGKT+ I
Sbjct: 5 ITDAKFVKSSSTLQECPSPNKPEYAFIGRSNVGKSSLLNMLCQRKNLAKTSGTPGKTRLI 64
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NH+ IN+ WY VDLPGYGYA ++ R + DY L+RS LVS+F+L+D+ P
Sbjct: 65 NHYLINNQWYFVDLPGYGYAKLSKKERLKFTNLINDYLLHRSNLVSLFVLVDSRHPPMEQ 124
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKK---KKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
DL++ + LG+N IP ++VFTK DK K + N + L D+ E+ Q FF
Sbjct: 125 DLDFINNLGKNGIPFSIVFTKTDKLKPMQLENNTLVYKKRLLQDWAEIPQLFF------- 177
Query: 282 MTSSVTNQGRDEILLHMAQL 301
TS +T +GRDEIL + +L
Sbjct: 178 -TSVITQKGRDEILQFIEKL 196
>gi|237720986|ref|ZP_04551467.1| GTPase EngB [Bacteroides sp. 2_2_4]
gi|229449821|gb|EEO55612.1| GTPase EngB [Bacteroides sp. 2_2_4]
Length = 201
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 125/198 (63%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP+ PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITSAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +WYLVDLPGYGYA ++ + +DY L R + ++F+LID+ + +
Sbjct: 62 INHFLINKNWYLVDLPGYGYARRGQKGKNQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP +++FTK DK K G R + N+N + + ++ PP ++
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKLK-----GGRLKMNINAYLRELGKQWEELPPHFVS 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR +IL ++ +
Sbjct: 177 SSEDRTGRVDILNYIENI 194
>gi|282877547|ref|ZP_06286364.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella buccalis
ATCC 35310]
gi|281300332|gb|EFA92684.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella buccalis
ATCC 35310]
Length = 199
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 125/198 (63%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +AEF+ SS + CP D E+A +GRSNVGKSSL+N L K L+ TS TPGKT
Sbjct: 2 EIKKAEFLISSPTIDKCPKDNRIEYAFIGRSNVGKSSLINMLCNHKGLSKTSSTPGKTLL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IND WYLVDLPGYG+A ++++ D +K Y L R LV++F+LID +
Sbjct: 62 INHFLINDEWYLVDLPGYGFAKRSKKVQADIEKMINTYILQREQLVNLFVLIDVRHEQQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
ID + WLG+N+IP T+VFTK DK G + + N + E ++ ++ PP+ +T
Sbjct: 122 IDRAFIDWLGENEIPFTIVFTKADKL-----GTVKAKANAAQWMEQLRDAWEELPPYFIT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR+E+L ++ ++
Sbjct: 177 SSEKRTGREELLAYIDEI 194
>gi|189466062|ref|ZP_03014847.1| hypothetical protein BACINT_02427 [Bacteroides intestinalis DSM
17393]
gi|189434326|gb|EDV03311.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
intestinalis DSM 17393]
Length = 201
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 127/198 (64%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP PE+A +GRSNVGKSSL+N + RK LA+TS TPGKT
Sbjct: 2 EITSAEFVISNTDVKKCPPGIFPEYAFIGRSNVGKSSLINMMTGRKGLAMTSATPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN SWY+VDLPGYGYA ++ ++ + +DY L R + ++F+LID+ + +
Sbjct: 62 INHFLINKSWYIVDLPGYGYARRGQKGKSQIQRIIEDYILEREQMTNLFVLIDSRLDPQV 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
ID+E+ WLG++ IP ++VFTK DK K G R N+ + + ++ ++ PP+ +T
Sbjct: 122 IDIEFMGWLGEHGIPFSIVFTKGDKLK-----GGRLNSNIQQYLKKLKEQWEELPPYFVT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS G+ E+L ++ +
Sbjct: 177 SSENRMGKKELLDYIESI 194
>gi|423225167|ref|ZP_17211634.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
cellulosilyticus CL02T12C19]
gi|392633623|gb|EIY27565.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
cellulosilyticus CL02T12C19]
Length = 201
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 127/198 (64%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITSAEFVISNTDVKKCPPGIFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +WY+VDLPGYGYA ++ ++ + +DY L R + ++FLLID+ + +
Sbjct: 62 INHFLINKNWYIVDLPGYGYARRGQKGKSQIQRIIEDYILEREQMTNLFLLIDSRLEPQV 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
ID+E+ WLG++ +P ++VFTK DK K G R N+ + + ++ ++ PP+ +T
Sbjct: 122 IDIEFMGWLGEHGVPFSIVFTKGDKLK-----GGRLNTNIQQYLKKLKEQWEELPPYFVT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS G+ E+L ++ +
Sbjct: 177 SSENRMGKKELLDYIESI 194
>gi|293373048|ref|ZP_06619417.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus SD
CMC 3f]
gi|423298018|ref|ZP_17276078.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus
CL03T12C18]
gi|292632116|gb|EFF50725.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus SD
CMC 3f]
gi|392664655|gb|EIY58193.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus
CL03T12C18]
Length = 201
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 125/198 (63%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP+ PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITSAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +WYLVDLPGYGYA ++ + +DY L R + ++F+LID+ + +
Sbjct: 62 INHFLINKNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP +++FTK DK K G R + N+N + + ++ PP ++
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKLK-----GGRLKMNINAYLRELSKQWEELPPHFVS 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR +IL ++ +
Sbjct: 177 SSEDRTGRIDILNYIENI 194
>gi|300771784|ref|ZP_07081655.1| ribosome biogenesis GTP-binding protein YsxC [Sphingobacterium
spiritivorum ATCC 33861]
gi|300761170|gb|EFK57995.1| ribosome biogenesis GTP-binding protein YsxC [Sphingobacterium
spiritivorum ATCC 33861]
Length = 207
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 124/191 (64%), Gaps = 5/191 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V +AEFV S+ R + P LPE+A +GRSNVGKSSL+N++ +K LA TS+ PGKTQ I
Sbjct: 3 VKKAEFVCSNTRVDKLPDPTLPEYAFIGRSNVGKSSLINAMTNKKGLAKTSQKPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IND W+LVDLPGYG+A + R++W KF + Y +R L VF+LID+ + I
Sbjct: 63 NHFIINDEWFLVDLPGYGFAQTSKTNRSEWQKFIRRYLTHRDNLQCVFVLIDSRHEPQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DL++ WLG+ +P L+FTK DK+ K+ + N+ F++ + +F+ PP +TS
Sbjct: 123 DLDFCCWLGECGLPFMLIFTKADKQSAVKS-----DVNIAKFRKSLLQWFEEVPPHFLTS 177
Query: 285 SVTNQGRDEIL 295
+ T G + IL
Sbjct: 178 AETKTGCEPIL 188
>gi|346226485|ref|ZP_08847627.1| ribosome biogenesis GTP-binding protein YsxC [Anaerophaga
thermohalophila DSM 12881]
Length = 197
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/199 (46%), Positives = 122/199 (61%), Gaps = 5/199 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ A FV SS DCP+ PE+A +GRSNVGKSSLLN L R KLA TS TPGKT+ I
Sbjct: 3 ITDAHFVTSSTHPNDCPAPDKPEYAFIGRSNVGKSSLLNMLCNRHKLAKTSGTPGKTRLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN+ WY+VDLPGYGYA P+ + + K Y R LV++F+LID+
Sbjct: 63 NHFLINNKWYMVDLPGYGYAKLPKAQKGTFTKMIDSYLFGRPNLVNLFVLIDSRHSPMKQ 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DL++ LG N IP ++VFTK DK K E+N N ++E + ++ PP TS
Sbjct: 123 DLDFIFNLGTNSIPFSIVFTKTDKLKP-----GVLEKNTNIYKERLLEDWEILPPIFFTS 177
Query: 285 SVTNQGRDEILLHMAQLRN 303
++ N+GR+EIL ++ L N
Sbjct: 178 AINNRGREEILNYIENLNN 196
>gi|319902362|ref|YP_004162090.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
helcogenes P 36-108]
gi|319417393|gb|ADV44504.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
helcogenes P 36-108]
Length = 201
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 125/198 (63%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+++ AEFV S+ + CP PE+A +GRSNVGKSSL+N L K LA+TS TPGKT
Sbjct: 2 EISNAEFVISNTDVKKCPPGTFPEYAFIGRSNVGKSSLINMLTNHKGLAMTSATPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +WYLVDLPGYGYA ++ + + Y L R + ++F+L+D+ + +
Sbjct: 62 INHFLINKNWYLVDLPGYGYAKRGQKGQEQIQNIIRSYILQREQMTNLFVLVDSRLEPQA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDL++ WLG+N +P +VFTK DK K G R N+ + + ++ ++ PP+ +T
Sbjct: 122 IDLDFIEWLGENGVPFAIVFTKGDKMK-----GGRLNANIRQYLKKLEEQWEELPPYFIT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR+E+L ++ ++
Sbjct: 177 SSENRMGREELLDYIEKI 194
>gi|373462504|ref|ZP_09554223.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella maculosa
OT 289]
gi|371948068|gb|EHO65958.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella maculosa
OT 289]
Length = 198
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 126/199 (63%), Gaps = 5/199 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ ++EFV SS CP+D PE+A +GRSNVGKSSL+N L K LA TS TPGKT I
Sbjct: 3 IKKSEFVISSPTVGKCPADNKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN+ WYLVDLPGYG+A + ++ ++ Y L R LV+VF+LID + I
Sbjct: 63 NHFIINNEWYLVDLPGYGFAKRSKTVQKKLEQMISSYILQRKQLVNVFVLIDVRHEQQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E+ WLG++ +P T+VFTK DK K ++N + + ++ ++T PP+ +TS
Sbjct: 123 DREFVDWLGESNVPFTIVFTKADKLTPGK-----AKQNAAQWLDRLKDRWETLPPYYITS 177
Query: 285 SVTNQGRDEILLHMAQLRN 303
S QGR+E+L ++ ++ N
Sbjct: 178 SEKKQGREELLNYIEEINN 196
>gi|160886050|ref|ZP_02067053.1| hypothetical protein BACOVA_04056 [Bacteroides ovatus ATCC 8483]
gi|336416323|ref|ZP_08596658.1| GTP-binding protein engB [Bacteroides ovatus 3_8_47FAA]
gi|423286962|ref|ZP_17265813.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus
CL02T12C04]
gi|156108863|gb|EDO10608.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus
ATCC 8483]
gi|335938740|gb|EGN00624.1| GTP-binding protein engB [Bacteroides ovatus 3_8_47FAA]
gi|392673794|gb|EIY67249.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus
CL02T12C04]
Length = 201
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 125/198 (63%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP+ PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITSAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +WYLVDLPGYGYA ++ + +DY L R + ++F+LID+ + +
Sbjct: 62 INHFLINKNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP +++FTK DK K G R + N+N + + ++ PP ++
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKLK-----GGRLKMNINAYLRELGKQWEELPPHFVS 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR +IL ++ +
Sbjct: 177 SSEDRTGRIDILNYIENI 194
>gi|295084381|emb|CBK65904.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Bacteroides
xylanisolvens XB1A]
Length = 201
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 125/198 (63%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP+ PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITSAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +WYLVDLPGYGYA ++ + +DY L R + ++F+LID+ + +
Sbjct: 62 INHFLINKNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP +++FTK DK K G R + N+N + + ++ PP ++
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKLK-----GGRLKMNINAYLRELGKQWEELPPHFVS 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR +IL ++ +
Sbjct: 177 SSEDRTGRMDILNYIENI 194
>gi|262407938|ref|ZP_06084486.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
2_1_22]
gi|294646716|ref|ZP_06724339.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus SD
CC 2a]
gi|294807755|ref|ZP_06766548.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
xylanisolvens SD CC 1b]
gi|345511587|ref|ZP_08791127.1| GTP-binding protein engB [Bacteroides sp. D1]
gi|423213360|ref|ZP_17199889.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
xylanisolvens CL03T12C04]
gi|229443982|gb|EEO49773.1| GTP-binding protein engB [Bacteroides sp. D1]
gi|262354746|gb|EEZ03838.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
2_1_22]
gi|292637876|gb|EFF56271.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus SD
CC 2a]
gi|294445191|gb|EFG13865.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
xylanisolvens SD CC 1b]
gi|392693820|gb|EIY87050.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
xylanisolvens CL03T12C04]
Length = 201
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 125/198 (63%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP+ PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITSAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +WYLVDLPGYGYA ++ + +DY L R + ++F+LID+ + +
Sbjct: 62 INHFLINKNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP +++FTK DK K G R + N+N + + ++ PP ++
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKLK-----GGRLKMNINAYLRELGKQWEELPPHFVS 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR +IL ++ +
Sbjct: 177 SSEDRTGRVDILNYIENI 194
>gi|390943206|ref|YP_006406967.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Belliella
baltica DSM 15883]
gi|390416634|gb|AFL84212.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Belliella
baltica DSM 15883]
Length = 202
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 122/191 (63%), Gaps = 5/191 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ A F+ S+ CP+ EFA +GRSNVGKSSL+N L K LA TS PGKTQ I
Sbjct: 2 IKNATFLISNTDYNKCPAPDKAEFAFIGRSNVGKSSLINMLANNKNLAKTSGKPGKTQLI 61
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF +++ WY+VDLPGYG+A + L+ DW+ KDY +NR LV++F+LID+ + + I
Sbjct: 62 NHFIVDNKWYMVDLPGYGFAKVSKSLKADWEGMIKDYLVNRDNLVALFVLIDSRLEPQKI 121
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DLE+ +W G++ IP+ L+FTK DK+ + K + + F + + F+ AP + +TS
Sbjct: 122 DLEFITWCGESNIPIVLLFTKADKQSRPKT-----QSTVAKFLKASKAIFEEAPLYFVTS 176
Query: 285 SVTNQGRDEIL 295
+ + G+ E++
Sbjct: 177 ATSGDGKTEVV 187
>gi|145351401|ref|XP_001420069.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580302|gb|ABO98362.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 201
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 121/202 (59%), Gaps = 4/202 (1%)
Query: 104 QVAQAEFVKSSVRTEDCP-SDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
++A+ F SS D P SDGLPE AL+GRSNVGKSSLLNS+ A S PG T
Sbjct: 3 KMAKVAFESSSEDASDAPASDGLPEIALIGRSNVGKSSLLNSITFGAGAAAVSAKPGTTV 62
Query: 163 CINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAK 222
+NH+ ++ W LVDLPGYGYA A E WD FTKDYF+ R L V LL+DAS+P
Sbjct: 63 SMNHYLVDKKWRLVDLPGYGYAKADAEAIERWDAFTKDYFVRRENLAGVLLLVDASVPPT 122
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D YA+WL +++ P T+VFTKCD + K G +EN + + + P I
Sbjct: 123 ENDERYANWLIEHETPFTIVFTKCD---RDKPGMPSVDENKAALRRKLDEKWHRLPSMIS 179
Query: 283 TSSVTNQGRDEILLHMAQLRNY 304
TSSVT +GRDE+L ++ L Y
Sbjct: 180 TSSVTAEGRDEVLKFVSSLIVY 201
>gi|255536601|ref|YP_003096972.1| GTP-binding protein EngB [Flavobacteriaceae bacterium 3519-10]
gi|255342797|gb|ACU08910.1| GTP-binding protein EngB [Flavobacteriaceae bacterium 3519-10]
Length = 206
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 129/204 (63%), Gaps = 5/204 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ AEFV SS R +DCP +PE+A +GRSNVGKSSL+N+++ K LA TS+TPGKTQ I
Sbjct: 3 IKTAEFVTSSARWQDCPEPTMPEYAFIGRSNVGKSSLINAMLNFKDLAKTSQTPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN+ W+L DLPGYGYA + R +++K +Y LNR LV++F+L+DA + I
Sbjct: 63 NHFVINEQWFLTDLPGYGYARVSKTKRKEFEKLITNYILNRKNLVNLFVLVDARHTPQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D+E+ W G+N +P ++VFTK DK K N+ ++ + ++ P +TS
Sbjct: 123 DIEFIEWCGENSVPFSIVFTKADKLKP-----NTVISNVEHYKTELLKTWEDLPEIFVTS 177
Query: 285 SVTNQGRDEILLHMAQLRNYWLKH 308
+ G DE+L +++ + +++
Sbjct: 178 AEKRDGTDEVLKLISKTNTFLIEN 201
>gi|429751364|ref|ZP_19284284.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 326 str. F0382]
gi|429180786|gb|EKY21988.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 326 str. F0382]
Length = 201
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 125/197 (63%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +AEFV S+ + CP + LPE+A +GRSNVGKSSL+N L K LA TS PGKTQ I
Sbjct: 2 IKKAEFVMSNSQVSKCPKENLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLI 61
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF+I++SW+LVDLPGYGYA +E + + +F YF R LV F+L+D + I
Sbjct: 62 NHFKIDNSWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHEPQKI 121
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D+E+ WLG++ IP +VFTK DK K E N+ +++++ ++ PP+ +TS
Sbjct: 122 DVEFMQWLGEHGIPFAIVFTKADKLKPLA-----IELNIAAYRQVLLETWEEFPPYFITS 176
Query: 285 SVTNQGRDEILLHMAQL 301
+ G++E+ ++ Q+
Sbjct: 177 AENKTGKEELTHYIEQI 193
>gi|325298117|ref|YP_004258034.1| GTP-binding protein engB [Bacteroides salanitronis DSM 18170]
gi|324317670|gb|ADY35561.1| GTP-binding protein engB [Bacteroides salanitronis DSM 18170]
Length = 200
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 120/192 (62%), Gaps = 5/192 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A+FV S+ R + CP LPE+A +GRSNVGKSSL+N L KLA+TS TPGKT
Sbjct: 2 EITSAKFVISNSRADMCPEGNLPEYAFIGRSNVGKSSLINMLTNHSKLAMTSSTPGKTLL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN+SWYLVDLPGYGYA +++ + Y L R + +F+LID+ + +
Sbjct: 62 INHFLINNSWYLVDLPGYGYAQRGKKVMEQIKNIIQHYVLERMQMTCLFVLIDSRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N +P LVFTK DK+ K ++N+ F ++ ++ P + +T
Sbjct: 122 IDLEFIEWLGENSVPFALVFTKADKQNIVK-----TQQNVERFLNTLKEQWEELPAYFIT 176
Query: 284 SSVTNQGRDEIL 295
S+ GR E+L
Sbjct: 177 SAEKKTGRKEVL 188
>gi|375254286|ref|YP_005013453.1| ribosome biogenesis GTP-binding protein YsxC [Tannerella forsythia
ATCC 43037]
gi|363407669|gb|AEW21355.1| ribosome biogenesis GTP-binding protein YsxC [Tannerella forsythia
ATCC 43037]
Length = 202
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 125/198 (63%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP PE+A +GRSNVGKSSL+N L RK+LA+TS+ PGKTQ
Sbjct: 3 EIKSAEFVISNTDVQQCPDGTRPEYAFIGRSNVGKSSLINMLTARKRLAMTSQKPGKTQL 62
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN WY+VDLPGYGYA + R + + + Y L R L +F+L+D +
Sbjct: 63 INHFIINGDWYIVDLPGYGYAQHGKANRENLRRIIESYILRRPQLTCLFVLLDCRHAPQK 122
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N++P ++FTK DK K R +ENL+ +++ + ++ P + +
Sbjct: 123 IDLEFMEWLGENEVPFAIIFTKTDKISK-----GRLQENLDAYRQKMLETWEELPNILTS 177
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR+EIL ++ ++
Sbjct: 178 SSENRDGREEILHYIDEI 195
>gi|312131612|ref|YP_003998952.1| ribosome biogenesis GTP-binding protein ysxc [Leadbetterella
byssophila DSM 17132]
gi|311908158|gb|ADQ18599.1| ribosome biogenesis GTP-binding protein YsxC [Leadbetterella
byssophila DSM 17132]
Length = 200
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 123/192 (64%), Gaps = 5/192 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
Q+ A F KSS + + CP D LPE A +GRSNVGKSSL+N L K LA TS TPGKTQ
Sbjct: 3 QIRSAVFSKSSAKIDQCPQDNLPEIAFIGRSNVGKSSLINMLTGVKNLAKTSSTPGKTQL 62
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INH+ ++++WYLVDLPGYGYA P + W+K T DY L+R TL+ VF+L+D I +
Sbjct: 63 INHYLVDNAWYLVDLPGYGYAKVPMSEKAKWEKMTWDYLLDRKTLLYVFVLVDIRIKPQK 122
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
DL++ LG+N I + +VFTK DK K + G+R N+ F E ++ + P + +T
Sbjct: 123 SDLDFIRKLGENGIAIKIVFTKEDKVKTME--GQR---NIMAFLEALKEDWDILPEYFVT 177
Query: 284 SSVTNQGRDEIL 295
SS G+ E+L
Sbjct: 178 SSEKRSGKVEML 189
>gi|404448256|ref|ZP_11013249.1| GTP-binding protein engB [Indibacter alkaliphilus LW1]
gi|403765877|gb|EJZ26752.1| GTP-binding protein engB [Indibacter alkaliphilus LW1]
Length = 202
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 127/202 (62%), Gaps = 6/202 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ A+FV S+ + CP PEFA +GRSNVGKSSL+N L K LA TS PGKTQ I
Sbjct: 2 IKNAQFVISNTDYKKCPEPTKPEFAFIGRSNVGKSSLINMLTNNKNLAKTSGKPGKTQLI 61
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN +WY+VDLPGYG+A + +++ W+K +Y NR LV++ +L+D+ + + I
Sbjct: 62 NHFVINGNWYMVDLPGYGFAKVSKGIKSTWEKMISNYLTNRDNLVALCVLVDSRLEPQKI 121
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DLE+ +W G+N IP L+FTK DK+ K K ++N+ F F P + +TS
Sbjct: 122 DLEFITWCGENDIPFILIFTKSDKQAKSK-----TQQNIQKFLNECVKIFGEDPQFFVTS 176
Query: 285 SVTNQGRDEILLHM-AQLRNYW 305
+ +++G++++L +++ Y+
Sbjct: 177 AQSSEGKEDVLTFFDEEVKEYY 198
>gi|227540053|ref|ZP_03970102.1| GTP-binding protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227240069|gb|EEI90084.1| GTP-binding protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 207
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 123/191 (64%), Gaps = 5/191 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V +AEFV S+ R + P LPE+A +GRSNVGKSSL+N++ +K LA TS+ PGKTQ I
Sbjct: 3 VKKAEFVCSNTRVDKLPDPTLPEYAFIGRSNVGKSSLINAMTNKKGLAKTSQKPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IND W+LVDLPGYG+A + R++W KF + Y +R L VF+LID+ + I
Sbjct: 63 NHFIINDEWFLVDLPGYGFAQTSKTNRSEWQKFIRRYLTHRDNLQCVFVLIDSRHEPQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DL++ WLG+ +P LVFTK DK+ K+ + N+ F++ + +F+ PP +TS
Sbjct: 123 DLDFCCWLGECGLPFMLVFTKADKQSAVKS-----DVNIAKFRKSLLQWFEEVPPHFLTS 177
Query: 285 SVTNQGRDEIL 295
+ G + IL
Sbjct: 178 AEAKTGCEPIL 188
>gi|399032400|ref|ZP_10731869.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Flavobacterium
sp. CF136]
gi|398069252|gb|EJL60619.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Flavobacterium
sp. CF136]
Length = 206
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 129/203 (63%), Gaps = 12/203 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEF+ S+ CP D LPE+A +GRSNVGKSSL+N L K LA TS PGKTQ
Sbjct: 2 KINTAEFIISNSEVSKCPQDFLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF+IN++W+LVDLPGYGYA ++ ++ + +F DYF R LV F+LID A+
Sbjct: 62 INHFKINNNWFLVDLPGYGYAKVSKKTKSVFQQFITDYFETREQLVCAFVLIDIRHEAQN 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKN----GGKRPEENLNDFQELIQGFFQTAPP 279
ID+E+ S++G+++IP ++FTK DK K K + + N+++E+ P
Sbjct: 122 IDIEFMSYMGESEIPFCIIFTKADKISKTKVDSHIAAYKKQMFANNWEEM--------PH 173
Query: 280 WIMTSSVTNQGRDEILLHMAQLR 302
+ +TS+ + G++E+L ++ ++
Sbjct: 174 YFVTSATESTGKEELLSYIDEVN 196
>gi|383451571|ref|YP_005358292.1| GTP-binding protein EngB [Flavobacterium indicum GPTSA100-9]
gi|380503193|emb|CCG54235.1| Probable GTP-binding protein EngB [Flavobacterium indicum
GPTSA100-9]
Length = 205
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 87/201 (43%), Positives = 128/201 (63%), Gaps = 6/201 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V AEFV S+ CP D +PE+A +GRSNVGKSSL+N L K LA TS PGKTQ
Sbjct: 2 KVNTAEFVISNSDASKCPKDPIPEYAFIGRSNVGKSSLINMLTGHKSLAKTSARPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +W+LVDLPGYGYA + + + KF DYF R+ LV F+LID+ + +
Sbjct: 62 INHFLINKNWFLVDLPGYGYARVSKSTKATFQKFITDYFETRAQLVCAFVLIDSRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQE-LIQGFFQTAPPWIM 282
ID+E+ ++LG++ IP ++FTK DK G + ++N+ +++ L+ ++ P + +
Sbjct: 122 IDVEFINYLGESGIPFCMIFTKADKL-----GKTQVQKNVAAYKKHLLANDWEEIPQYFV 176
Query: 283 TSSVTNQGRDEILLHMAQLRN 303
TSS GR+EIL ++ + +
Sbjct: 177 TSSADGTGREEILKYIGAVND 197
>gi|149371567|ref|ZP_01890983.1| GTP-binding protein [unidentified eubacterium SCB49]
gi|149355194|gb|EDM43754.1| GTP-binding protein [unidentified eubacterium SCB49]
Length = 199
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/198 (43%), Positives = 123/198 (62%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEF+ S+ CP D LPE+A +GRSNVGKSSL+N LV +K +A TS PGKTQ
Sbjct: 2 KIKAAEFIMSNSEVAKCPKDRLPEYAFIGRSNVGKSSLINMLVDQKNMAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +W+LVDLPGYGYA ++ + + +F DYF R L+ F+L+D +P
Sbjct: 62 INHFLINKNWFLVDLPGYGYARVSKKAKKTFQRFITDYFEKREQLILAFVLVDCRHEPQP 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
ID E+ +LG+N IP ++FTK DK K E NL ++ + ++ P +T
Sbjct: 122 IDQEFMQYLGENGIPFHIIFTKADKLKPGA-----LERNLKAYETKMLETWEEMPRSFVT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
S+ +GRDE+L ++ +L
Sbjct: 177 SASKYEGRDELLNYIGEL 194
>gi|304382687|ref|ZP_07365181.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella marshii
DSM 16973]
gi|304336312|gb|EFM02554.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella marshii
DSM 16973]
Length = 202
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 121/195 (62%), Gaps = 5/195 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ ++EFV SS + CP+D PE+A +GRSNVGKSSL+N L K LA TS TPGKT
Sbjct: 2 EIKKSEFVISSPTVQKCPADTKPEYAFIGRSNVGKSSLINMLCNHKNLAKTSATPGKTLL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN+ WYLVDLPGYGYA + ++ + Y L R L++VF+LID A+
Sbjct: 62 INHFIINNEWYLVDLPGYGYAKRSKTVQQQLSRMITSYILQRKQLINVFVLIDIRHEAQQ 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D E+ WLG++ IP +VFTK DK G + +N+ + ++ ++ PP+ +T
Sbjct: 122 NDREFIDWLGESSIPFAIVFTKADKL-----GAVKARQNVEAYMNALKDRWEELPPYFIT 176
Query: 284 SSVTNQGRDEILLHM 298
S+ GRDE+L ++
Sbjct: 177 SAEKRTGRDELLNYI 191
>gi|374385840|ref|ZP_09643342.1| ribosome biogenesis GTP-binding protein YsxC [Odoribacter laneus
YIT 12061]
gi|373224785|gb|EHP47121.1| ribosome biogenesis GTP-binding protein YsxC [Odoribacter laneus
YIT 12061]
Length = 201
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 121/198 (61%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +AEF+ S+ CP E+A +GRSNVGKSSL+N L RK+LA T+ PGKTQ
Sbjct: 2 EIKKAEFIVSNADVSKCPPSDRHEYAFIGRSNVGKSSLINMLTNRKELAKTAVKPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN+ WY+VDLPGYGYA + R ++K DY L R L+ +F+LID+
Sbjct: 62 INHFLINNEWYMVDLPGYGYARTSKSTRGKFEKIICDYILKRDNLICLFVLIDSRHKPLQ 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N +P +VFTK DK + + + D+ ++ ++T P MT
Sbjct: 122 IDLEFMEWLGENGVPFVMVFTKADKLTASER-----QRCIEDYHNMMLDTWETTPMAFMT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR+E+L ++ +L
Sbjct: 177 SSEKRLGREEVLDYIDEL 194
>gi|381187404|ref|ZP_09894968.1| GTP-binding protein EngB [Flavobacterium frigoris PS1]
gi|379650532|gb|EIA09103.1| GTP-binding protein EngB [Flavobacterium frigoris PS1]
Length = 206
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 124/198 (62%), Gaps = 4/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ CP D LPE+A +GRSNVGKSSL+N L KKLA TS PGKTQ
Sbjct: 2 KINTAEFVISNSDVSKCPKDFLPEYAFIGRSNVGKSSLINMLTNHKKLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN++W+LVDLPGYGYA ++ ++ + +F DYF R LV F+LID A+
Sbjct: 62 INHFIINNNWFLVDLPGYGYAKVSKKTKSVFQQFITDYFETREQLVCAFVLIDIRHEAQA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
ID+E+ S++G+++IP +VFTK DK K K N F + P + +T
Sbjct: 122 IDIEFMSYMGESEIPFCIVFTKADKISKVKIDSHIAAYKKNMFANN----WAEMPHYFVT 177
Query: 284 SSVTNQGRDEILLHMAQL 301
S+ + G++E+L ++ ++
Sbjct: 178 SATESLGKEELLTYIEEV 195
>gi|332882335|ref|ZP_08449963.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 329 str. F0087]
gi|332679719|gb|EGJ52688.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 329 str. F0087]
Length = 230
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 125/204 (61%), Gaps = 5/204 (2%)
Query: 98 KYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKT 157
K D ++ AEFV S+ CPS PE+A +GRSNVGKSSL+N L KKLA TS T
Sbjct: 28 KIQTDMEIKSAEFVISNSSVGKCPSTHAPEYAFIGRSNVGKSSLINMLTNNKKLAKTSAT 87
Query: 158 PGKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDA 217
PGKT INHF IN+ WYLVDLPGYGYA ++ + + Y L R + ++F+L+D+
Sbjct: 88 PGKTLLINHFLINNEWYLVDLPGYGYAKISKKEQEKLQQIISSYILCREQMTNLFVLVDS 147
Query: 218 SIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTA 277
+ ID+E+ WLG+N IP ++VFTK DK K K + N++ + + ++ ++
Sbjct: 148 RHEPQKIDMEFIEWLGENGIPFSIVFTKADKSKPTK-----LKANIDAYLKALKEQWEEL 202
Query: 278 PPWIMTSSVTNQGRDEILLHMAQL 301
PP+ +TSS GR E+L ++ +
Sbjct: 203 PPYFITSSENKTGRTELLNYIESI 226
>gi|336402582|ref|ZP_08583314.1| GTP-binding protein engB [Bacteroides sp. 1_1_30]
gi|335947979|gb|EGN09726.1| GTP-binding protein engB [Bacteroides sp. 1_1_30]
Length = 201
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/198 (43%), Positives = 124/198 (62%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + CP+ PE+A +GRSNVGKSSL+N L RK LA+TS TPGKT
Sbjct: 2 EITSAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTML 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +WYLVDLPGYGYA ++ + +DY L R + ++F+LID+ + +
Sbjct: 62 INHFLINKNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP +++FTK DK K G + N+N + + ++ PP ++
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKLK-----GGHLKMNINAYLRELGKQWEELPPHFVS 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR +IL ++ +
Sbjct: 177 SSEDRTGRVDILNYIENI 194
>gi|336171700|ref|YP_004578838.1| GTP-binding protein engB [Lacinutrix sp. 5H-3-7-4]
gi|334726272|gb|AEH00410.1| GTP-binding protein engB [Lacinutrix sp. 5H-3-7-4]
Length = 206
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 122/198 (61%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ CP D LPE+A +GRSNVGKSSL+N L RK LA TS PGKTQ
Sbjct: 2 KIKSAEFVISNSEVSKCPKDMLPEYAFIGRSNVGKSSLINMLTSRKSLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN WYLVDLPGYGYA + + + KF YF R LV F+L+D +P
Sbjct: 62 INHFIINKEWYLVDLPGYGYARVSKSTKKVFQKFITKYFEQREQLVCAFVLVDIRHKPQP 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ +LG+ IP ++FTK DK K N R ++ D+++++ ++ P +T
Sbjct: 122 IDLEFMQYLGEGGIPFCIIFTKADKL--KPNAITR---HVEDYRKIMLETWEEMPQHFIT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS + G+D++L + +L
Sbjct: 177 SSSKDIGKDDVLNFIGEL 194
>gi|357046418|ref|ZP_09108045.1| ribosome biogenesis GTP-binding protein YsxC [Paraprevotella clara
YIT 11840]
gi|355530657|gb|EHH00063.1| ribosome biogenesis GTP-binding protein YsxC [Paraprevotella clara
YIT 11840]
Length = 220
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 125/204 (61%), Gaps = 5/204 (2%)
Query: 98 KYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKT 157
K D ++ AEFV S+ CPS PE+A +GRSNVGKSSL+N L KKLA TS T
Sbjct: 18 KIQTDMEIKSAEFVISNSSVGKCPSTHAPEYAFIGRSNVGKSSLINMLTNNKKLAKTSAT 77
Query: 158 PGKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDA 217
PGKT INHF IN+ WYLVDLPGYGYA ++ + + Y L R + ++F+L+D+
Sbjct: 78 PGKTLLINHFLINNEWYLVDLPGYGYAKISKKEQEKLQQIISSYILCREQMTNLFVLVDS 137
Query: 218 SIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTA 277
+ ID+E+ WLG+N IP ++VFTK DK K K + N++ + + ++ ++
Sbjct: 138 RHEPQKIDMEFIEWLGENGIPFSIVFTKADKSKPTK-----LKANIDAYLKALKEQWEEL 192
Query: 278 PPWIMTSSVTNQGRDEILLHMAQL 301
PP+ +TSS GR E+L ++ +
Sbjct: 193 PPYFITSSENKTGRTELLNYIESI 216
>gi|281425242|ref|ZP_06256155.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oris
F0302]
gi|299142639|ref|ZP_07035769.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oris C735]
gi|281400708|gb|EFB31539.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oris
F0302]
gi|298575854|gb|EFI47730.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oris C735]
Length = 198
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 125/198 (63%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ ++EFV S+ CP D PE+A +GRSNVGKSSL+N L K LA TS TPGKT
Sbjct: 2 EIKKSEFVISAPTVSKCPKDDKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN+ WYLVDLPGYG+A + ++ ++ Y L R L++VF+LID +
Sbjct: 62 INHFIINNEWYLVDLPGYGFAKRSKTVQQKLEQMIASYILQRKQLINVFVLIDIRHEQQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
ID E+ WLG++ +P T+VFTK DK G + ++N + E ++ ++T PP+ +T
Sbjct: 122 IDREFIDWLGESNVPFTIVFTKADKL-----GPGKAKQNAQKWLEQLKDRWETLPPYYIT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GR+E+L ++ ++
Sbjct: 177 SSEKKLGREELLAYIDEI 194
>gi|317502810|ref|ZP_07960914.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella salivae
DSM 15606]
gi|315666082|gb|EFV05645.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella salivae
DSM 15606]
Length = 198
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 124/198 (62%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ ++EFV S+ CP D PE+A +GRSNVGKSSL+N L K LA TS TPGKT
Sbjct: 2 EIKKSEFVISAPTVSMCPKDDKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN+ WYLVDLPGYG+A + ++ ++ Y L R +V+VF+LID +
Sbjct: 62 INHFIINNEWYLVDLPGYGFAKRSKTVQQKLEQMIASYILQRKQMVNVFVLIDIRHEQQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
ID E+ WLG++ +P T+VFTK DK G + ++N + ++ ++T PP+ +T
Sbjct: 122 IDREFIDWLGESNVPFTIVFTKADKL-----GAGKAKQNAQKWMNQLKDRWETLPPYFIT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GRDE+L ++ ++
Sbjct: 177 SSEKKLGRDELLDYIDEI 194
>gi|347537382|ref|YP_004844807.1| GTP-binding protein EngB [Flavobacterium branchiophilum FL-15]
gi|345530540|emb|CCB70570.1| Probable GTP-binding protein EngB [Flavobacterium branchiophilum
FL-15]
Length = 204
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 129/196 (65%), Gaps = 6/196 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEF+ S+ CP++ LPE+A +GRSNVGKSSL+N L K LA TS PGKTQ
Sbjct: 2 KITTAEFIISNSDVSKCPAEFLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGKPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF+IN++W+LVDLPGYGYA ++ ++ + +F DYF R LV F+LID + A+
Sbjct: 62 INHFKINNNWFLVDLPGYGYARVSKKTKSVFQQFITDYFEKRQQLVCAFVLIDIRLEAQN 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQE-LIQGFFQTAPPWIM 282
ID+E+ S++G+++IP ++FTK DK K K + N+ +++ +I+ + P +
Sbjct: 122 IDIEFMSYMGESEIPFCIIFTKADKLSKTK-----IDSNIAAYKKAMIKNNWTEMPQHFI 176
Query: 283 TSSVTNQGRDEILLHM 298
TSS+ G++ +L ++
Sbjct: 177 TSSLDATGKETVLNYI 192
>gi|365959845|ref|YP_004941412.1| GTP-binding protein YsxC [Flavobacterium columnare ATCC 49512]
gi|365736526|gb|AEW85619.1| GTP-binding protein YsxC [Flavobacterium columnare ATCC 49512]
Length = 208
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 123/193 (63%), Gaps = 6/193 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEF+ S+ CP + LPE+A +GRSNVGKSSL+N L K LA TS PGKTQ
Sbjct: 2 KINTAEFIISNSIVSKCPQERLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSSKPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF+IN++W+LVDLPGYGYA ++ + + KF DYF R LV F+LID A+
Sbjct: 62 INHFKINNNWFLVDLPGYGYAKVSKKTKEIFQKFITDYFEKREQLVCAFVLIDIRHEAQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQE-LIQGFFQTAPPWIM 282
IDLE+ ++LG+ IP ++FTK DK K K E+N+ +++ L+ ++ P +
Sbjct: 122 IDLEFITYLGEIGIPFCIIFTKADKISKGK-----TEQNVAAYRKALLANNWEEMPQHFI 176
Query: 283 TSSVTNQGRDEIL 295
TSS+ GRD +L
Sbjct: 177 TSSLDVVGRDGVL 189
>gi|163787480|ref|ZP_02181927.1| GTP-binding protein [Flavobacteriales bacterium ALC-1]
gi|159877368|gb|EDP71425.1| GTP-binding protein [Flavobacteriales bacterium ALC-1]
Length = 204
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 123/192 (64%), Gaps = 5/192 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A+FV S+ CP D LPE+A +GRSNVGKSSL+N L RK LA TS PGKTQ
Sbjct: 2 KIKSAKFVVSNSEVAKCPKDSLPEYAFIGRSNVGKSSLINMLTDRKSLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN+SWYLVDLPGYGYA + + + KF +YF R L+S F+L+D +P
Sbjct: 62 INHFIINESWYLVDLPGYGYARVSKSSKKKFQKFITNYFEKRQQLISAFVLVDIRHKPQP 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ +LG++ IP ++FTK DK K + ++N++ E + ++ P + +T
Sbjct: 122 IDLEFMQYLGESGIPFGIIFTKADKLKPMA-----IDRHVNNYCEELLKTWEEVPQYFVT 176
Query: 284 SSVTNQGRDEIL 295
SS + G++++L
Sbjct: 177 SSSKHIGKEDVL 188
>gi|340348100|ref|ZP_08671194.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella dentalis
DSM 3688]
gi|433652943|ref|YP_007296797.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Prevotella
dentalis DSM 3688]
gi|339608016|gb|EGQ12937.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella dentalis
DSM 3688]
gi|433303476|gb|AGB29291.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Prevotella
dentalis DSM 3688]
Length = 204
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 113/191 (59%), Gaps = 5/191 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ QA+FV S+ CP D PEFA +GRSNVGKSSL+N L K LA TS TPGKT I
Sbjct: 3 IKQAQFVVSAPTVSKCPGDTKPEFAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN WYLVDLPGYGYA + ++ D+ Y L R L VF+L+D + +
Sbjct: 63 NHFIINGEWYLVDLPGYGYAKRSKTVQQQLDRMIHSYMLQREQLTCVFVLVDVRHEQQLV 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E+ WLG + +P ++FTK DK G + +N + +L+ ++ PP+ +TS
Sbjct: 123 DREFVDWLGASGVPFAIIFTKADKL-----GRVKARDNAEAWMKLLHSTWEELPPYFITS 177
Query: 285 SVTNQGRDEIL 295
S GRDE+L
Sbjct: 178 SEKKTGRDEVL 188
>gi|261879389|ref|ZP_06005816.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella bergensis
DSM 17361]
gi|270333957|gb|EFA44743.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella bergensis
DSM 17361]
Length = 205
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 121/197 (61%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ QA+FV S+ E CP D PEFA +GRSNVGKSSL+N L K LA TS TPGKT I
Sbjct: 3 IKQAQFVISAPTVEKCPRDTKPEFAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF I+ WYLVDLPGYGYA + + DK + Y L R L+++F+LID + I
Sbjct: 63 NHFIIDKEWYLVDLPGYGYAKRSKSVIEKIDKMIQTYILQRKQLINLFVLIDVRHEQQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E+ WLG + IP +++FTK DK G + ++N + + + ++ PP+ +TS
Sbjct: 123 DREFIDWLGISGIPFSIIFTKADKL-----GRVKAKQNADAWMNALLDSWEELPPYFITS 177
Query: 285 SVTNQGRDEILLHMAQL 301
S GRDE+L ++ ++
Sbjct: 178 SEKKTGRDEVLDYIGKV 194
>gi|256426042|ref|YP_003126695.1| small GTP-binding protein [Chitinophaga pinensis DSM 2588]
gi|256040950|gb|ACU64494.1| small GTP-binding protein [Chitinophaga pinensis DSM 2588]
Length = 202
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 121/191 (63%), Gaps = 5/191 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ AE++ S+V + CP+ LPE+A +GRSNVGKSSL+N L +KLA TS TPGKTQ I
Sbjct: 3 IKSAEYLISNVDWQKCPTPNLPEYAFIGRSNVGKSSLINMLANNEKLAKTSGTPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN SWYLVDLPGYG+A + R W++ ++Y R LV++F+LID+ + +
Sbjct: 63 NHFLINGSWYLVDLPGYGFAKVSQSQRRSWEQMIENYLRKRENLVNIFVLIDSRHTPQKL 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D+E+ + LG+ QIP LVFTK DK + + N+ F ++ ++ P +TS
Sbjct: 123 DIEFINQLGEWQIPFALVFTKADKSTQAETS-----RNIKAFLNKLRETWEFLPAHFVTS 177
Query: 285 SVTNQGRDEIL 295
+V GRD IL
Sbjct: 178 TVKKMGRDAIL 188
>gi|408673112|ref|YP_006872860.1| GTP-binding protein engB [Emticicia oligotrophica DSM 17448]
gi|387854736|gb|AFK02833.1| GTP-binding protein engB [Emticicia oligotrophica DSM 17448]
Length = 203
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 121/198 (61%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +A+FV S+ CP PE+A +GRSNVGKSSL+N L K LA TS+ PGKTQ
Sbjct: 5 KLIEAKFVTSAADYRKCPPPTKPEYAFIGRSNVGKSSLINMLAGNKNLAKTSQVPGKTQL 64
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +Y+VDLPGYG+A AP+ R W +Y NR +LV VF+LID +
Sbjct: 65 INHFEINKKYYIVDLPGYGFAKAPKNEREKWGDMIGNYLANRESLVCVFVLIDIRHEPQR 124
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
+DLE+ +LG+ +P L+FTK DK GG E+N+ F++ + + P + +T
Sbjct: 125 VDLEFLDFLGERDVPFCLIFTKADKV-----GGLTAEKNVELFKKTMLLSWTKIPQYFIT 179
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GRDEIL + ++
Sbjct: 180 SSERRLGRDEILQAIEEM 197
>gi|392398264|ref|YP_006434865.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Flexibacter
litoralis DSM 6794]
gi|390529342|gb|AFM05072.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Flexibacter
litoralis DSM 6794]
Length = 349
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 125/196 (63%), Gaps = 5/196 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ A+F++S+ + CPS +PE+A +GRSNVGKSSL+N++ R LA TS TPGKTQ I
Sbjct: 3 INTAKFLESNPSFKTCPSPHMPEYAFIGRSNVGKSSLINAMTNRNSLAKTSSTPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN++WYLVDLPGYG+A + R D++ +Y R LV F+L+D + I
Sbjct: 63 NHFLINENWYLVDLPGYGWARVSKSKRLDFEGLITEYLSERKNLVVTFVLVDIRHEPQAI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DLE+ WL +N+IP +VFTK DK K +L ++ +++ ++ PP +TS
Sbjct: 123 DLEFFEWLAENEIPFAIVFTKADKLNNSKLVA-----SLERYETVLKSRWEALPPNFITS 177
Query: 285 SVTNQGRDEILLHMAQ 300
+V N+G ++IL ++ +
Sbjct: 178 AVKNEGTEDILEYIEK 193
>gi|288800196|ref|ZP_06405655.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral
taxon 299 str. F0039]
gi|288333444|gb|EFC71923.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral
taxon 299 str. F0039]
Length = 203
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 123/198 (62%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ ++EFV SS CP+D E+A +GRSNVGKSSL+N L K LA TS PGKT
Sbjct: 2 EIKKSEFVVSSPTVSKCPTDNKYEYAFIGRSNVGKSSLINMLCTHKGLAKTSSKPGKTLL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN+ WYLVDLPGYGYA + ++ + Y L R L+++F+LID P +
Sbjct: 62 INHFIINNEWYLVDLPGYGYAKQSKAVQKKLQQMISQYILQREQLINLFVLIDIRHPQQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
ID E+ WLG +Q+P T++FTK DK G ++N + + +Q ++ PP+ +T
Sbjct: 122 IDREFIDWLGASQVPFTIIFTKADKL-----GPVAAQKNASAWMRALQDAWEELPPYFIT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
S+ G++E+L +++Q+
Sbjct: 177 SAEKKTGKEEVLNYISQI 194
>gi|225009952|ref|ZP_03700424.1| GTP-binding protein HSR1-related [Flavobacteria bacterium MS024-3C]
gi|225005431|gb|EEG43381.1| GTP-binding protein HSR1-related [Flavobacteria bacterium MS024-3C]
Length = 160
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 75/147 (51%), Positives = 103/147 (70%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ E CP D +PE+A +GRSNVGKSSL+N L +K LA TS PGKTQ
Sbjct: 2 KITSAEFVMSNAHVEKCPKDPIPEYAFIGRSNVGKSSLINMLTSKKSLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF+IN +W+LVDLPGYGYA + + + K+ +YFL R+ LV F+L+D +P
Sbjct: 62 INHFKINQNWFLVDLPGYGYARVSKRDKKTFQKYITEYFLKRTQLVCAFVLVDIRHEPQP 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRK 250
+DL++ W+G+N+IP ++FTK DK K
Sbjct: 122 VDLDFMRWMGENEIPFCIIFTKADKLK 148
>gi|323345334|ref|ZP_08085557.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oralis
ATCC 33269]
gi|323093448|gb|EFZ36026.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oralis
ATCC 33269]
Length = 199
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/198 (43%), Positives = 120/198 (60%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ ++EFV S+ CP+D PE+A +GRSNVGKSSL+N L K LA TS TPGKT
Sbjct: 2 EIKKSEFVISAPTIGKCPNDNKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN+ WYLVDLPGYG+A + ++ + Y L R L +VF+LID
Sbjct: 62 INHFIINNEWYLVDLPGYGFAKRSKSVQKQLQQMISSYILQREQLANVFVLIDIRHDPMT 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
ID E+ WLG++ IP + FTK DK G + +N + + +Q ++T PP+ +T
Sbjct: 122 IDREFIDWLGESSIPFAIAFTKADKL-----GLVKARQNAEKWMKTLQDRWETLPPYFIT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
S+ QGRDEIL ++ +
Sbjct: 177 SAEKKQGRDEILEYIESI 194
>gi|338210190|ref|YP_004654237.1| GTP-binding protein engB [Runella slithyformis DSM 19594]
gi|336304003|gb|AEI47105.1| GTP-binding protein engB [Runella slithyformis DSM 19594]
Length = 199
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 118/197 (59%), Gaps = 5/197 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ + FVKSS E CP PE+A +GRSNVGKSSL+N+L R+ LA TS PGKTQ
Sbjct: 2 KIKTSVFVKSSATNEQCPKPDRPEYAFIGRSNVGKSSLINALTERRDLAKTSSKPGKTQV 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IND WYLVDLPGYGYA + R W + +Y R LV F+LID+ I +
Sbjct: 62 INHFLINDMWYLVDLPGYGYAKVSQTDRKAWGEMITNYLFKRENLVCTFVLIDSRIEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
+DLE+ LG N +P L+FTK DK + + L ++++ + + P +T
Sbjct: 122 VDLEFMEKLGSNGVPFALIFTKTDKLT-----ATQLQTQLTNYKKTLLETWDELPLTFVT 176
Query: 284 SSVTNQGRDEILLHMAQ 300
SSV+ QGR ++L + +
Sbjct: 177 SSVSKQGRLDVLKQIEE 193
>gi|375013450|ref|YP_004990438.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Owenweeksia
hongkongensis DSM 17368]
gi|359349374|gb|AEV33793.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Owenweeksia
hongkongensis DSM 17368]
Length = 201
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 124/200 (62%), Gaps = 5/200 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+ A+FV S+ CP PE+A +GRSNVGKS+L+N +V+RK LA TS PGKTQ
Sbjct: 2 HIHSADFVCSNNDITKCPEPNKPEYAFIGRSNVGKSTLINKMVQRKGLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN++WYL DLPGYGYA + + + K +DY + R LV++F+LID+ +
Sbjct: 62 INHFLINEAWYLTDLPGYGYAKVSKTSKEKFQKLIEDYIIERPNLVNLFVLIDSRHEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+ +IP ++VFTK DK G + N+ + + + + P + T
Sbjct: 122 IDLEFMEWLGELEIPFSMVFTKTDKL-----GSGKLNTNIKVYSKKMLQTWAEMPVFFAT 176
Query: 284 SSVTNQGRDEILLHMAQLRN 303
S+ T +G D++L ++ QL N
Sbjct: 177 SAETGEGCDQVLNYIEQLNN 196
>gi|85816839|gb|EAQ38024.1| GTPase of unknown function [Dokdonia donghaensis MED134]
Length = 201
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 128/199 (64%), Gaps = 6/199 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A FV S+ CP+ +PE+A +GRSNVGKSSL+N L RK LA TS PGKTQ
Sbjct: 2 KIKSATFVVSNSEVSKCPNTRIPEYAFIGRSNVGKSSLINMLTNRKSLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN++W+LVDLPGYGYA ++ + + KF DYF R ++S F+L+D +
Sbjct: 62 INHFLINENWHLVDLPGYGYARVSKKDKKYFQKFITDYFEQREQMISAFVLVDCRHEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQE-LIQGFFQTAPPWIM 282
ID+E+ ++G+ +IP +++FTK DK + + E N+ +++ +++G + P + +
Sbjct: 122 IDMEFMEYMGEKEIPFSIIFTKADKLRPQA-----LERNIEEYKRIMLEGVWWEFPNYFV 176
Query: 283 TSSVTNQGRDEILLHMAQL 301
+SS G+DEIL ++ ++
Sbjct: 177 SSSSDGTGQDEILNYIEEI 195
>gi|88801296|ref|ZP_01116824.1| GTP-binding protein [Polaribacter irgensii 23-P]
gi|88781954|gb|EAR13131.1| GTP-binding protein [Polaribacter irgensii 23-P]
Length = 203
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 123/192 (64%), Gaps = 5/192 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEF+ S+ P++ +PE+A +GRSNVGKSSL+N L+ RK LA S PGKTQ
Sbjct: 2 KIKSAEFIMSNSNVMKAPTERMPEYAFIGRSNVGKSSLINMLMERKDLAKISGKPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF+IN+ W+LVDLPGYGYA+ ++ R + F ++YF R LV F+LID+ +
Sbjct: 62 INHFKINEEWFLVDLPGYGYASVSKKKRVIFQYFIENYFKEREQLVCTFVLIDSRHDPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDL++ +LG+NQIP ++FTK DK G + + + +++ + ++T P +T
Sbjct: 122 IDLDFMQFLGENQIPFCIIFTKADKL-----GSSKLNKQITSYKKKLLQHWETLPTSFLT 176
Query: 284 SSVTNQGRDEIL 295
SS T+ GR E L
Sbjct: 177 SSNTSLGRTEFL 188
>gi|359406314|ref|ZP_09199012.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella stercorea
DSM 18206]
gi|357556376|gb|EHJ37985.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella stercorea
DSM 18206]
Length = 202
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 120/199 (60%), Gaps = 5/199 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ ++EF SS CP D PEFA +GRSNVGKSSL+N L K LA TS TPGKT I
Sbjct: 3 IKKSEFTMSSATVSQCPKDTKPEFAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN+ WYLVDLPGYG+A + ++ D+ Y L R LV+ F+LID I
Sbjct: 63 NHFIINNDWYLVDLPGYGFAKRSKTVQKKLDQMITSYILQRQQLVNTFVLIDIRHDPMKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D ++ +WLG++ +P +++FTK DK G R ++N + ++ ++ PP+ +TS
Sbjct: 123 DTDFINWLGESSVPFSIIFTKADKL-----GPVRAKQNAAKWMNSLKEQWEELPPYFITS 177
Query: 285 SVTNQGRDEILLHMAQLRN 303
S GRDE+L ++ + N
Sbjct: 178 SEKKLGRDEVLDYVGNILN 196
>gi|313887114|ref|ZP_07820810.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas
asaccharolytica PR426713P-I]
gi|332300425|ref|YP_004442346.1| GTP-binding protein engB [Porphyromonas asaccharolytica DSM 20707]
gi|312923343|gb|EFR34156.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas
asaccharolytica PR426713P-I]
gi|332177488|gb|AEE13178.1| GTP-binding protein engB [Porphyromonas asaccharolytica DSM 20707]
Length = 203
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 122/197 (61%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ A FV+SS + CP LPE+A +GRSNVGKSSL+N L K LA+TS+ PGKTQ I
Sbjct: 3 IHSATFVQSSPSVKSCPQSTLPEYAFIGRSNVGKSSLINMLTGHKGLAMTSQKPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN+SW+LVDLPGYGYA E R + K Y R LV++F+L+D + I
Sbjct: 63 NHFLINESWHLVDLPGYGYARRSLEQREQFRKLIDQYVTKREALVNLFVLVDIRHEPQRI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DLE+ + +G+ IP ++VFTK DK K+ + + +Q + ++ PP +TS
Sbjct: 123 DLEFINEMGEKGIPFSIVFTKADKIGKQVQ-----RDAVEAYQSRLLEDWEELPPLFVTS 177
Query: 285 SVTNQGRDEILLHMAQL 301
+ T GRDE+L ++ QL
Sbjct: 178 ASTGLGRDELLDYIEQL 194
>gi|332667993|ref|YP_004450781.1| GTP-binding protein engB [Haliscomenobacter hydrossis DSM 1100]
gi|332336807|gb|AEE53908.1| GTP-binding protein engB [Haliscomenobacter hydrossis DSM 1100]
Length = 227
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 121/199 (60%), Gaps = 5/199 (2%)
Query: 103 AQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
++A AEF S CP + PEFA +GRSNVGKSSL+N L +K+LA TS+ PGKTQ
Sbjct: 23 TEIATAEFKGSFPSIGQCPKEEWPEFAFIGRSNVGKSSLINMLCDKKELAHTSQKPGKTQ 82
Query: 163 CINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAK 222
+N++ IN WY+VDLPGYGYA + R +W K +DY + R +L F+L+D++I +
Sbjct: 83 LLNYYLINQQWYIVDLPGYGYAKISQSKRKEWRKMIQDYLVKRPSLCCAFVLVDSNIKPQ 142
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D+E+ +WLG+ IP LVFTK D+ K + EEN+ QE + ++ P
Sbjct: 143 EKDIEFINWLGEMHIPFVLVFTKTDRLKPQD-----IEENIKLMQEKLLEYWNELPQQFF 197
Query: 283 TSSVTNQGRDEILLHMAQL 301
TS+ GR EIL ++ L
Sbjct: 198 TSASKRVGRTEILDYIEGL 216
>gi|228471282|ref|ZP_04056088.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas uenonis
60-3]
gi|228306924|gb|EEK16022.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas uenonis
60-3]
Length = 203
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 122/197 (61%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ A FV+SS + CP LPE+A +GRSNVGKSSL+N L K LA+TS+ PGKTQ I
Sbjct: 3 IHSATFVQSSPSVKSCPQSTLPEYAFIGRSNVGKSSLINMLTGHKGLAMTSQKPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN SW+LVDLPGYGYA E R + K Y R LV++F+L+D + I
Sbjct: 63 NHFLINQSWHLVDLPGYGYARRSLEQREQFRKLITQYVSKREALVNLFVLVDIRHEPQRI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DLE+ + +G+ IP ++VFTK DK K+ +E + ++ + ++ PP +TS
Sbjct: 123 DLEFINEMGEKGIPFSIVFTKADKIGKQVQ-----QEAVEAYRSRLLEDWEELPPLFVTS 177
Query: 285 SVTNQGRDEILLHMAQL 301
+ T GRDE+L ++ QL
Sbjct: 178 ASTGMGRDELLDYIDQL 194
>gi|282879591|ref|ZP_06288322.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella timonensis
CRIS 5C-B1]
gi|281306539|gb|EFA98568.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella timonensis
CRIS 5C-B1]
Length = 199
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 123/197 (62%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ QA+FV SS CP+D E+A +GRSNVGKSSL+N L + LA TS TPGKT I
Sbjct: 3 ITQAKFVLSSPNLGKCPTDQRIEYAFIGRSNVGKSSLINMLCNHQGLAKTSSTPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN+ WYLVDLPGYGYA ++++ + K Y L+R LV+VF+LID + I
Sbjct: 63 NHFLINNDWYLVDLPGYGYAKRSKKVQEEIQKLITTYLLHREQLVNVFVLIDVRHEQQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E+ WLG N+IP T++FTK DK G + + N++ + ++ ++ P + +TS
Sbjct: 123 DREFIDWLGLNEIPFTIIFTKADKL-----GTVKAKMNVDKWMSQLKDVWEELPRYFITS 177
Query: 285 SVTNQGRDEILLHMAQL 301
S GR E+L ++ ++
Sbjct: 178 SEKKTGRQELLDYIDEI 194
>gi|34540179|ref|NP_904658.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas
gingivalis W83]
gi|188995479|ref|YP_001929731.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas
gingivalis ATCC 33277]
gi|419970136|ref|ZP_14485646.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas
gingivalis W50]
gi|81572162|sp|Q7MX68.1|ENGB_PORGI RecName: Full=Probable GTP-binding protein EngB
gi|238689267|sp|B2RL89.1|ENGB_PORG3 RecName: Full=Probable GTP-binding protein EngB
gi|34396491|gb|AAQ65557.1| GTP-binding protein [Porphyromonas gingivalis W83]
gi|188595159|dbj|BAG34134.1| putative GTP-binding protein [Porphyromonas gingivalis ATCC 33277]
gi|392611551|gb|EIW94287.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas
gingivalis W50]
Length = 201
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/195 (45%), Positives = 121/195 (62%), Gaps = 5/195 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +A FV S+ CP LPE+A +GRSNVGKSSL+N L +K LA+TS+ PGKTQ
Sbjct: 2 EIKKAAFVISNTDVRKCPDTRLPEYAFIGRSNVGKSSLINMLTGQKGLAMTSQKPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF I+DSWYLVDLPGYGYA R + + Y L R L S+F+LID +
Sbjct: 62 INHFIIDDSWYLVDLPGYGYARLGASNRESLRRIIETYILCREQLSSLFVLIDCRHEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP ++VFTK DK R +EN +++ + ++ PP +T
Sbjct: 122 IDLEFLQWLGENGIPFSIVFTKADKL-----SFSRLKENTEAYKQKLLETWEELPPVFIT 176
Query: 284 SSVTNQGRDEILLHM 298
SS G++E+L ++
Sbjct: 177 SSEKKTGKEELLDYI 191
>gi|300727729|ref|ZP_07061115.1| GTP-binding protein [Prevotella bryantii B14]
gi|299775017|gb|EFI71623.1| GTP-binding protein [Prevotella bryantii B14]
Length = 200
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 120/196 (61%), Gaps = 5/196 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ ++EF S+ CP D PE+A +GRSNVGKSSL+N L K LA TS TPGKT I
Sbjct: 3 IKKSEFTISAPTVSKCPKDNKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN+ WYLVDLPGYG+A + ++ ++ Y L R L +VF+LID + I
Sbjct: 63 NHFIINNEWYLVDLPGYGFAKRSKSVQQKLEQMISSYILQRQQLYNVFVLIDVRHEQQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E+ WLG++QIP +VFTK DK G + ++N + + +Q ++ PP+ +TS
Sbjct: 123 DREFVDWLGKSQIPFAIVFTKADKL-----GPVKAKKNAEAWMKQLQDTWEDLPPYFITS 177
Query: 285 SVTNQGRDEILLHMAQ 300
S G++EIL ++ Q
Sbjct: 178 SEKKLGKEEILDYIEQ 193
>gi|429737925|ref|ZP_19271760.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella
saccharolytica F0055]
gi|429161478|gb|EKY03877.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella
saccharolytica F0055]
Length = 213
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 120/198 (60%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ ++ F S+ CP D E+A +GRSNVGKSSL+N L K LA TS TPGKT
Sbjct: 14 EIKKSAFTLSAPTVSQCPKDNKVEYAFIGRSNVGKSSLINMLCNHKGLAKTSSTPGKTLL 73
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IND+WYLVDLPGYG+A + ++ + Y L R LV+VF+LID +
Sbjct: 74 INHFIINDAWYLVDLPGYGFAKRSKTVQKQLQQIISGYILQREQLVNVFVLIDVRHEQQK 133
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
ID E+ WLG++ IP T+VFTK DK G + +N + + ++ ++ PP+ +T
Sbjct: 134 IDREFVDWLGESSIPFTIVFTKADKL-----GPVKARQNAERWMKQLESGWEELPPYFIT 188
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GRDE+L ++ ++
Sbjct: 189 SSEKRMGRDEVLGYIEEI 206
>gi|333377283|ref|ZP_08469018.1| GTP-binding protein engB [Dysgonomonas mossii DSM 22836]
gi|332884603|gb|EGK04860.1| GTP-binding protein engB [Dysgonomonas mossii DSM 22836]
Length = 201
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 117/197 (59%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ A+FV S+ CP DG PE+A +GRSNVGKSSL+N L RK LA+TS PGKTQ I
Sbjct: 3 IKDAQFVISNTDYRKCPQDGKPEYAFIGRSNVGKSSLINMLTNRKGLAMTSSKPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN+ WYLVDLPGYGYA ++ R K +Y L R+ L +FLL+D + I
Sbjct: 63 NHFIINNEWYLVDLPGYGYAQRGKDGREQIRKIIDNYILKRTELTCLFLLLDCRHEPQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DL++ +WLG+ IP +VFTK DK K R ++N + + ++ P TS
Sbjct: 123 DLDFINWLGEEGIPFVIVFTKTDKISK-----GRLKDNSEAYINKLHETWEEIPTIFYTS 177
Query: 285 SVTNQGRDEILLHMAQL 301
S G DEIL ++ +
Sbjct: 178 SEQRAGGDEILDYIDNI 194
>gi|311745594|ref|ZP_07719379.1| ribosome biogenesis GTP-binding protein YsxC [Algoriphagus sp. PR1]
gi|126578156|gb|EAZ82376.1| ribosome biogenesis GTP-binding protein YsxC [Algoriphagus sp. PR1]
Length = 203
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ QA+FV S+ +CP E A +GRSNVGKSSL+N L + LA TS+ PGKTQ I
Sbjct: 2 IQQAQFVISNTNPGNCPKPDRAEIAFIGRSNVGKSSLINMLTGKSGLAKTSQKPGKTQLI 61
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN+ WYLVDLPGYG+A +++ W+ Y R L VF+LID+ + + I
Sbjct: 62 NHFMINEKWYLVDLPGYGFAKINVKVKQGWESMISTYLTKRENLCGVFVLIDSRLEPQKI 121
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DLE+ W G +P LVFTK DK+ K K +N+ F + + F+ AP + +TS
Sbjct: 122 DLEFLYWCGTEGVPAVLVFTKADKQSKNKT-----NQNIQKFLKKMVDIFEEAPQYFVTS 176
Query: 285 SVTNQGRDEILLHMAQL 301
+ + QG++E+ + +L
Sbjct: 177 AESAQGKEELTSFIEEL 193
>gi|258647974|ref|ZP_05735443.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella tannerae
ATCC 51259]
gi|260851815|gb|EEX71684.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella tannerae
ATCC 51259]
Length = 204
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 126/198 (63%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEF SS R + CP+ +PE+A +GRSNVGKSSL+N L R LA TS TPGKT
Sbjct: 2 KINTAEFKISSARLDQCPATMIPEYAFIGRSNVGKSSLINMLTGRSALAKTSSTPGKTLL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IND W+LVDLPGYG+A ++ R + K + Y R L ++F+LID+ + +
Sbjct: 62 INHFIINDEWFLVDLPGYGFAKRSKKEREELRKMIERYVTRREQLTNLFVLIDSRLRPQT 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ +LG+ +P +++FTK DK K+ + N+ F ++ ++ PP+ ++
Sbjct: 122 IDLEFIRFLGEAGVPFSIIFTKADKNKRGV-----LKSNVQGFLATLKEEWEELPPYFIS 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS + GR++IL ++ Q+
Sbjct: 177 SSTSKLGREDILNYIEQI 194
>gi|334147248|ref|YP_004510177.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas
gingivalis TDC60]
gi|333804404|dbj|BAK25611.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas
gingivalis TDC60]
Length = 201
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 88/195 (45%), Positives = 120/195 (61%), Gaps = 5/195 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +A FV S+ CP LPE+A +GRSNVGKSSL+N L +K LA+TS+ PGKTQ
Sbjct: 2 EIKKAAFVISNTDVRKCPDTRLPEYAFIGRSNVGKSSLINMLTGQKGLAMTSQKPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF I+DSWYLVDLPGYGYA R + + Y L R L S+F+LID +
Sbjct: 62 INHFIIDDSWYLVDLPGYGYARLGASNRESLRRIIETYILCREQLSSLFVLIDCRHEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+N IP +VFTK DK R +EN +++ + ++ PP +T
Sbjct: 122 IDLEFLQWLGENGIPFGIVFTKADKL-----SFSRLKENTEAYKQKLLETWEELPPVFIT 176
Query: 284 SSVTNQGRDEILLHM 298
SS G++E+L ++
Sbjct: 177 SSEKKTGKEELLDYI 191
>gi|436833740|ref|YP_007318956.1| putative GTP-binding protein engB [Fibrella aestuarina BUZ 2]
gi|384065153|emb|CCG98363.1| putative GTP-binding protein engB [Fibrella aestuarina BUZ 2]
Length = 211
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 123/213 (57%), Gaps = 15/213 (7%)
Query: 98 KYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKT 157
+Y ++ QAEFV S+ CP PE+A +GRSNVGKSSL+N LV+R LA TS
Sbjct: 2 RYLCTMKIHQAEFVISNSDPAKCPKPDRPEYAFIGRSNVGKSSLINRLVQRD-LAKTSGK 60
Query: 158 PGKTQCINHFRIND---------SWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTL 208
PGKTQ INHF IN +WYLVDLPGYGYA P+ +R + Y R L
Sbjct: 61 PGKTQLINHFSINSGKLTPKGETAWYLVDLPGYGYAKVPKNVRDQFAGMISTYLTGRENL 120
Query: 209 VSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQE 268
+F+LID IP + IDL++ + LG+ ++P LVFTK +K K G R L +
Sbjct: 121 RCIFVLIDMRIPPQQIDLDFITRLGEERLPFVLVFTKAEKLKS----GAR-STALEIYHA 175
Query: 269 LIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQL 301
+ F T P + +TS+ T +GRDEIL ++ +
Sbjct: 176 AVAQIFDTFPTYFITSATTGEGRDEILAYLDDM 208
>gi|325269826|ref|ZP_08136436.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella
multiformis DSM 16608]
gi|324987799|gb|EGC19772.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella
multiformis DSM 16608]
Length = 199
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 121/199 (60%), Gaps = 5/199 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ ++EF SS CPSD E+A +GRSNVGKSSL+N L K LA TS PGKT I
Sbjct: 3 IKKSEFTISSPSIARCPSDTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN+ WYLVDLPGYGYA + +R ++ Y L R LV+VF+LID + I
Sbjct: 63 NHFIINNEWYLVDLPGYGYAKNSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHEQQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E+ WLG++ IP +++FTK DK K + N + + ++ ++ PP+ +TS
Sbjct: 123 DREFVDWLGESNIPFSIIFTKADKLSPSK-----AKSNALLWMKKLEDRWEALPPYFITS 177
Query: 285 SVTNQGRDEILLHMAQLRN 303
+ T G++E+L ++ Q+ N
Sbjct: 178 AETKAGKEEVLDYIEQINN 196
>gi|332292523|ref|YP_004431132.1| ribosome biogenesis GTP-binding protein YsxC [Krokinobacter sp.
4H-3-7-5]
gi|332170609|gb|AEE19864.1| ribosome biogenesis GTP-binding protein YsxC [Krokinobacter sp.
4H-3-7-5]
Length = 203
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 126/199 (63%), Gaps = 6/199 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A FV S+ CP+ +PE+A +GRSNVGKSSL+N L RK LA TS PGKTQ
Sbjct: 2 KIKSASFVVSNSEVTKCPNTRIPEYAFIGRSNVGKSSLINMLTNRKSLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN++W+LVDLPGYGYA ++ + + KF DYF R ++S F+L+D +
Sbjct: 62 INHFLINENWHLVDLPGYGYARVSKKDKKYFQKFITDYFEQREQMISAFVLVDCRHEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQE-LIQGFFQTAPPWIM 282
ID+E+ +LG+ +IP +++FTK DK + + E N+ +++ ++ G + P + +
Sbjct: 122 IDMEFMEYLGEKEIPFSIIFTKADKLRPQA-----LERNIEVYKKIMLDGVWWEFPKYFV 176
Query: 283 TSSVTNQGRDEILLHMAQL 301
+S+ G+DEIL ++ L
Sbjct: 177 SSASHGDGQDEILGYIEDL 195
>gi|449467975|ref|XP_004151697.1| PREDICTED: GTP-binding protein At2g22870-like, partial [Cucumis
sativus]
Length = 154
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 106/156 (67%), Gaps = 7/156 (4%)
Query: 151 LALTSKTPGKTQCINHFR-INDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLV 209
L LT TP K + I + IN + P +A R DW FTK YF+NR TLV
Sbjct: 3 LGLTGLTPSKKKNIQILKDING----IIKPSRSFAKVSETARMDWSSFTKGYFMNRDTLV 58
Query: 210 SVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQEL 269
+V LLIDAS+P + IDL+ A+WLG+N IPMT VFTKCDK K K GKRP+EN+ +FQ+L
Sbjct: 59 AVLLLIDASVPPQKIDLDCANWLGRNNIPMTFVFTKCDKMKVSK--GKRPDENIREFQQL 116
Query: 270 IQGFFQTAPPWIMTSSVTNQGRDEILLHMAQLRNYW 305
I+ ++ P WIMTSSVT GRDE+LLHM+QLRNYW
Sbjct: 117 IRQNYKVHPSWIMTSSVTGLGRDELLLHMSQLRNYW 152
>gi|325856392|ref|ZP_08172108.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella denticola
CRIS 18C-A]
gi|327312485|ref|YP_004327922.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella denticola
F0289]
gi|325483576|gb|EGC86548.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella denticola
CRIS 18C-A]
gi|326944463|gb|AEA20348.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella denticola
F0289]
Length = 199
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 120/197 (60%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ ++EF SS CP+D E+A +GRSNVGKSSL+N L K LA TS PGKT I
Sbjct: 3 IKKSEFTISSPSVSRCPADTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN+ WYLVDLPGYGYA + +R ++ Y L R LV+VF+LID + I
Sbjct: 63 NHFIINNEWYLVDLPGYGYAKNSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHEQQTI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E+ WLG + IP +++FTK DK K + N + + ++ ++T PP+ +TS
Sbjct: 123 DREFVDWLGGSNIPFSIIFTKADKLSPAK-----AKSNALMWMKKLEDRWETLPPYFITS 177
Query: 285 SVTNQGRDEILLHMAQL 301
+ +G+DEIL ++ Q+
Sbjct: 178 AEKKEGKDEILDYIEQI 194
>gi|409198030|ref|ZP_11226693.1| GTP-binding protein YsxC [Marinilabilia salmonicolor JCM 21150]
Length = 199
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 126/198 (63%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +A F+ SS +DCP+ PE+A +GRSNVGKSSLLN L R+KLA S TPGKT+
Sbjct: 2 RITEASFLTSSANPKDCPAPNKPEYAFIGRSNVGKSSLLNMLCDRRKLAKISGTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN+SWY+VDLPGYGYA + R + K + Y +R+ L ++F+LID+
Sbjct: 62 INHFLINNSWYMVDLPGYGYAKLSKSEREKFKKMIEGYLTDRTNLSNLFVLIDSRHAPIQ 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
DL++ +G +P +VFTK DK K + E+N+ ++E + ++ PP +T
Sbjct: 122 ADLDFMQNMGIKGVPFAVVFTKTDKLKPAQ-----LEDNITKYKERLLEDWEELPPIFLT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS T QG++E+L ++ ++
Sbjct: 177 SSSTRQGQEELLSYIEKI 194
>gi|150026105|ref|YP_001296931.1| ribosome biogenesis GTP-binding protein YsxC [Flavobacterium
psychrophilum JIP02/86]
gi|166225953|sp|A6H1A5.1|ENGB_FLAPJ RecName: Full=Probable GTP-binding protein EngB
gi|149772646|emb|CAL44129.1| Probable GTP-binding protein EngB [Flavobacterium psychrophilum
JIP02/86]
Length = 205
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 124/198 (62%), Gaps = 4/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEF+ S+ CP + LPE+A +GRSNVGKSSL+N L K LA TS PGKTQ
Sbjct: 2 KINTAEFIISNSIVSLCPQEHLPEYAFIGRSNVGKSSLINMLTNHKSLAKTSGRPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF+IN++W+LVDLPGYGYA ++ + + +F DYF R LV F+LID A+
Sbjct: 62 INHFKINNNWFLVDLPGYGYAKVSKKTKEVFQQFITDYFEKREQLVCAFVLIDIRHEAQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ ++LG+ ++P +VFTK DK K GK + L++ ++ P +T
Sbjct: 122 IDLEFITYLGEIELPFCIVFTKADKISK----GKVAQHVAAYRTALLKNNWEEMPHHFVT 177
Query: 284 SSVTNQGRDEILLHMAQL 301
S+ + G++ +L ++ ++
Sbjct: 178 SATEHTGKESLLSYIDEV 195
>gi|359496880|ref|XP_003635362.1| PREDICTED: GTP-binding protein At2g22870-like [Vitis vinifera]
Length = 160
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/123 (63%), Positives = 94/123 (76%), Gaps = 2/123 (1%)
Query: 183 YAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLV 242
+A AP R DW FTK YFLNR+TLV+V LLIDAS+P + IDL+ A+WLG+N IPMT V
Sbjct: 38 FAKAPESARMDWSAFTKGYFLNRATLVAVLLLIDASVPPQKIDLDCANWLGRNNIPMTFV 97
Query: 243 FTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQLR 302
FTKCDK K K GKRP+EN+ +FQ ++ + PPWIMTSSVT GRDE+LLHM+QLR
Sbjct: 98 FTKCDKMKGGK--GKRPDENIKNFQVMMGQNYGKHPPWIMTSSVTGLGRDELLLHMSQLR 155
Query: 303 NYW 305
NYW
Sbjct: 156 NYW 158
>gi|340349291|ref|ZP_08672311.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella nigrescens
ATCC 33563]
gi|445115980|ref|ZP_21378408.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella nigrescens
F0103]
gi|339612028|gb|EGQ16843.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella nigrescens
ATCC 33563]
gi|444840244|gb|ELX67281.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella nigrescens
F0103]
Length = 204
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/194 (43%), Positives = 117/194 (60%), Gaps = 5/194 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +EF SS CP+D E+A +GRSNVGKSSL+N L K LA TS PGKT I
Sbjct: 3 IKTSEFSISSPSIARCPNDTKNEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN WY+VDLPGYGYA + + +R ++ Y L R LV+VF+LID + I
Sbjct: 63 NHFIINKEWYIVDLPGYGYAKSSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHEQQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E+ WLGQ+ IP ++VFTK DK + K + N + E ++ ++ PP+ +TS
Sbjct: 123 DREFVDWLGQSNIPFSIVFTKADKLSEGK-----AKANAEAWMEKLEDTWEVTPPYFITS 177
Query: 285 SVTNQGRDEILLHM 298
+ GR+EIL ++
Sbjct: 178 AEKKTGREEILDYI 191
>gi|383810573|ref|ZP_09966067.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral
taxon 306 str. F0472]
gi|383356941|gb|EID34431.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral
taxon 306 str. F0472]
Length = 199
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 118/197 (59%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ ++EF SS CP D E+A +GRSNVGKSSL+N L K LA TS PGKT I
Sbjct: 3 IKKSEFTISSPSLSKCPDDTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN+ WYLVDLPGYGYA + +R ++ Y L R LV+VF+LID + I
Sbjct: 63 NHFIINNEWYLVDLPGYGYAKNSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHEQQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E+ WLG++ +P +++FTK DK K + N + + +Q ++ PP+ +TS
Sbjct: 123 DREFVDWLGESNVPFSIIFTKADKLSPAK-----AKSNALLWMKKLQDRWEVLPPYFITS 177
Query: 285 SVTNQGRDEILLHMAQL 301
S GRDE+L ++ Q+
Sbjct: 178 SEDKTGRDEVLDYIDQI 194
>gi|431797188|ref|YP_007224092.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Echinicola
vietnamensis DSM 17526]
gi|430787953|gb|AGA78082.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Echinicola
vietnamensis DSM 17526]
Length = 201
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 117/197 (59%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +A F+ S+ +CP PEFA +GRSNVGKSSL+N L K LA TS PGKTQ I
Sbjct: 2 IKKATFLTSNSDFRNCPDPTKPEFAFIGRSNVGKSSLINMLANNKNLAKTSGKPGKTQLI 61
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF W++VDLPGYG+A + ++ DW+K K Y +R L + F+LID+ + +
Sbjct: 62 NHFDAEGKWWIVDLPGYGFAQVSKSIKADWEKMIKGYLTSRPNLKATFVLIDSRLDPQKR 121
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DL++ W QN +P+ LVFTK DK K G N+N F Q F+ P + +TS
Sbjct: 122 DLDFILWCAQNGVPIVLVFTKADKLSVSKVKG-----NVNKFLAASQVIFEEPPLYFVTS 176
Query: 285 SVTNQGRDEILLHMAQL 301
S T GR+E++ M ++
Sbjct: 177 STTAVGREELVGFMEEV 193
>gi|387132003|ref|YP_006297976.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella intermedia
17]
gi|386374851|gb|AFJ07638.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella intermedia
17]
Length = 204
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +EF SS CP+D E+A +GRSNVGKSSL+N L K LA TS PGKT I
Sbjct: 3 IKTSEFSISSPTISKCPNDTKNEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN WY+VDLPGYGYA + +R ++ Y L R LV+VF+LID + I
Sbjct: 63 NHFIINKEWYIVDLPGYGYAKNSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHEQQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E+ WLGQ+ IP +++FTK DK G + + N + + ++ ++ PP+ +TS
Sbjct: 123 DREFIDWLGQSNIPFSIIFTKADKL-----SGGKAKANAEAWMKKLEDTWEITPPYFITS 177
Query: 285 SVTNQGRDEILLHMAQL 301
S + GR+E+L ++ +
Sbjct: 178 SESKVGREEVLGYIESI 194
>gi|260592424|ref|ZP_05857882.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella veroralis
F0319]
gi|260535660|gb|EEX18277.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella veroralis
F0319]
Length = 199
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 118/197 (59%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ ++EF SS CP D E+A +GRSNVGKSSL+N L K LA TS PGKT I
Sbjct: 3 IKKSEFTISSPSLAKCPDDTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN+ WYLVDLPGYGYA + +R ++ Y L R LV+VF+LID + I
Sbjct: 63 NHFIINNEWYLVDLPGYGYAKNSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHEQQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E+ WLG++ +P +++FTK DK K + N + + +Q ++ PP+ +TS
Sbjct: 123 DREFVDWLGESNVPFSIIFTKADKLSPAK-----AKSNALLWMKKLQDRWEVLPPYFITS 177
Query: 285 SVTNQGRDEILLHMAQL 301
S GRDE+L ++ Q+
Sbjct: 178 SEDKAGRDEVLDYIDQI 194
>gi|223939366|ref|ZP_03631245.1| GTP-binding protein HSR1-related [bacterium Ellin514]
gi|223891970|gb|EEF58452.1| GTP-binding protein HSR1-related [bacterium Ellin514]
Length = 196
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 113/192 (58%), Gaps = 5/192 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+ A F S+ E CP + LPEFA +GRSNVGKSSL+N L RK LA SK PG T+
Sbjct: 2 NINSAVFEVSAPNLETCPEETLPEFAFIGRSNVGKSSLVNLLAGRKDLARVSKVPGYTKL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F IN +W LVDLPGYGYA RE ++ +Y RS L VF+LID+ +
Sbjct: 62 INFFTINKAWRLVDLPGYGYAHIARENSARFNDAVSNYLAKRSNLYCVFVLIDSRHKPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+ P L+FTK DK K + + N++ F+E I G+F+ P +
Sbjct: 122 IDLEFVQWLGEQSAPCALIFTKTDKVK-----AAQLQTNMDLFKESISGWFENVPEILSC 176
Query: 284 SSVTNQGRDEIL 295
SSVT G EIL
Sbjct: 177 SSVTKNGVREIL 188
>gi|254494964|ref|ZP_01052919.2| GTPase of unknown function [Polaribacter sp. MED152]
gi|213690546|gb|EAQ42347.2| GTPase of unknown function [Polaribacter sp. MED152]
Length = 194
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 114/177 (64%), Gaps = 5/177 (2%)
Query: 119 DCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDL 178
+ P D +PE+A +GRSNVGKSSL+N L+ RK LA S PGKTQ INHF+IND+W+LVDL
Sbjct: 8 NAPKDRIPEYAFIGRSNVGKSSLINMLMERKDLAKISGKPGKTQLINHFKINDNWFLVDL 67
Query: 179 PGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 238
PGYGYA ++ R + F ++YF R LV F+LID+ + IDL++ +LG+NQIP
Sbjct: 68 PGYGYAQVSKKKRVIFQYFIENYFKEREQLVCTFVLIDSRHDPQKIDLDFMRFLGENQIP 127
Query: 239 MTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEIL 295
LVFTK DK G + + + +++ + ++T P +TSS T GR E L
Sbjct: 128 FCLVFTKADKL-----GSSKLNKQITSYKKKLLQHWETLPMTFLTSSSTGLGRKEFL 179
>gi|255037700|ref|YP_003088321.1| HSR1-like GTP-binding protein [Dyadobacter fermentans DSM 18053]
gi|254950456|gb|ACT95156.1| GTP-binding protein HSR1-related [Dyadobacter fermentans DSM 18053]
Length = 202
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 116/192 (60%), Gaps = 5/192 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +A +V S+ + CP LPE+A +GRSNVGKSSL+N L +K LA TS+ PGKTQ
Sbjct: 2 KVQEARYVMSNSDYQKCPEPVLPEYAFIGRSNVGKSSLINMLTSKKALAKTSQQPGKTQM 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF I+D+WYLVDLPGYGYA + R W+K DY R L+ F+L+D A
Sbjct: 62 INHFIIDDAWYLVDLPGYGYAKVSKVEREKWEKMIHDYLHYRENLICTFVLVDVRHSAMA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
+DL + + LG+ IP ++FTK DK K + + + ++ + ++ P +T
Sbjct: 122 VDLNFMAALGEAGIPFEIIFTKADKLKPAQVASQ-----VEAYKRKMAELWEEVPEMYVT 176
Query: 284 SSVTNQGRDEIL 295
S+ N+GR+ IL
Sbjct: 177 SAEKNEGREPIL 188
>gi|429726804|ref|ZP_19261590.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral
taxon 473 str. F0040]
gi|429145752|gb|EKX88837.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral
taxon 473 str. F0040]
Length = 201
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 124/200 (62%), Gaps = 6/200 (3%)
Query: 105 VAQAEFVKSSVRTEDCPSDG-LPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+ A+F SS R + CP D +PE+A +GRSNVGKSSL+N L RK LA TS TPGKT
Sbjct: 3 IKSADFFISSGRADQCPQDSQIPEYAFIGRSNVGKSSLINMLTGRKALAKTSSTPGKTML 62
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN+ W+LVDLPGYG+A ++ + + Y L R L +F+LID+ +P +
Sbjct: 63 INHFMINNEWFLVDLPGYGFARRGKKEMEKFRNLIEYYILERQQLTCLFVLIDSRLPPQK 122
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG+ IP +++FT+ DK K + ++N+ F + +Q ++ P +T
Sbjct: 123 IDLEFIQWLGEEGIPFSIIFTQADKNKVGE-----LKKNVQGFLKKLQEEWEELPKHFVT 177
Query: 284 SSVTNQGRDEILLHMAQLRN 303
SS GR E+L ++ ++ +
Sbjct: 178 SSEKGTGRTELLDYIEEINH 197
>gi|392389966|ref|YP_006426569.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Ornithobacterium
rhinotracheale DSM 15997]
gi|390521044|gb|AFL96775.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Ornithobacterium
rhinotracheale DSM 15997]
Length = 217
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 119/192 (61%), Gaps = 5/192 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A+FV+S+ CP+ PE+A +GRSNVGKSSL+N L KKLA TS TPGKTQ
Sbjct: 2 KITSAKFVESNSDWRKCPAPDRPEYAFIGRSNVGKSSLINMLADNKKLAKTSGTPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+NHF IN WYLVDLPGYGYA ++ R + + Y LNR L+++++L+DA
Sbjct: 62 VNHFLINGEWYLVDLPGYGYAQVSKKTRKKFSELITGYILNRKNLINLYVLVDARHDPMK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ +L + IP ++V TK DK +NL +Q+ + +QT PP+ T
Sbjct: 122 IDLEFMEFLSKKGIPFSIVLTKIDKL-----SSSALAKNLMKYQKKMLNTWQTLPPFYKT 176
Query: 284 SSVTNQGRDEIL 295
S+ + G++E+L
Sbjct: 177 SATSKVGKEELL 188
>gi|357042492|ref|ZP_09104197.1| GTP-binding protein engB [Prevotella histicola F0411]
gi|355369444|gb|EHG16839.1| GTP-binding protein engB [Prevotella histicola F0411]
Length = 199
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 119/197 (60%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ ++EF SS CP D E+A +GRSNVGKSSL+N L K LA TS PGKT I
Sbjct: 3 IKKSEFTISSPNVTKCPEDTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN+ WYLVDLPGYGYA + + +R ++ Y L R LV+VF+LID + I
Sbjct: 63 NHFIINNEWYLVDLPGYGYAKSSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHEQQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E+ WLG++ +P +++FTK DK K + N + + ++ ++ PP+ +TS
Sbjct: 123 DREFVDWLGESNVPFSIIFTKADKLSPAK-----AKSNALLWMKKLEDRWENLPPYFITS 177
Query: 285 SVTNQGRDEILLHMAQL 301
+ G+DE+L ++ Q+
Sbjct: 178 AEQKMGKDEVLDYIEQI 194
>gi|345879820|ref|ZP_08831387.1| GTP-binding protein engB [Prevotella oulorum F0390]
gi|343920160|gb|EGV30898.1| GTP-binding protein engB [Prevotella oulorum F0390]
Length = 198
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 118/195 (60%), Gaps = 5/195 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ ++ FV S+ CP+D E+A +GRSNVGKSSL+N L K LA TS TPGKT
Sbjct: 2 EIKKSAFVVSAPTVSKCPNDDKIEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IND WYLVDLPGYGYA + ++ ++ Y L R LV+VF+LID +
Sbjct: 62 INHFIINDEWYLVDLPGYGYAKRSKTVQQKLEQMISGYILQRKQLVNVFVLIDVRHDPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
ID E+ WLG++ +P ++FTK DK G + + N + ++ ++T PP+ +T
Sbjct: 122 IDREFIDWLGESGVPFAIIFTKADKL-----GPGKAKMNAQQWMNALKDRWETLPPYFIT 176
Query: 284 SSVTNQGRDEILLHM 298
SS GRD +L ++
Sbjct: 177 SSEKKLGRDAVLDYI 191
>gi|281419987|ref|ZP_06250986.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella copri DSM
18205]
gi|281405787|gb|EFB36467.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella copri DSM
18205]
Length = 201
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 118/198 (59%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ ++EF S+ R CP D E+A +GRSNVGKSSL+N L K LA TS TPGKT
Sbjct: 2 EIKKSEFTISAPRVSMCPKDTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN+ WYLVDLPGYG+A + ++ ++ Y L R L +VF+LID +
Sbjct: 62 INHFIINNEWYLVDLPGYGFAKRSKTVQKQLEQMISSYILQRQQLANVFVLIDVRHDQQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
ID E+ WLG++ +P +VFTK DK G + N + ++ ++ PP+ +T
Sbjct: 122 IDREFVDWLGESGVPFCIVFTKADKL-----GPVKARMNAEKWMHALEDRWEALPPYFIT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GRDE+L ++ ++
Sbjct: 177 SSEKKLGRDEVLDYIDEI 194
>gi|167751930|ref|ZP_02424057.1| hypothetical protein ALIPUT_00172 [Alistipes putredinis DSM 17216]
gi|167660171|gb|EDS04301.1| ribosome biogenesis GTP-binding protein YsxC [Alistipes putredinis
DSM 17216]
Length = 198
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 117/192 (60%), Gaps = 5/192 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
Q+ +A+FV SS R P D LPEFA +GRSNVGKSSL+N L R LA S TPGKT+
Sbjct: 2 QINKAQFVCSSERLSQLPKDSLPEFAFIGRSNVGKSSLVNMLTGRSGLAKVSGTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHFRINDSWYLVDLPGYGYA + R ++ K DY L + +F+L+D+ + +
Sbjct: 62 INHFRINDSWYLVDLPGYGYARTSKTQRDEFAKIITDYVLRCERMHFLFVLVDSRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDL + LG+ IP +VFTK DK + ++ +++++ ++ PP +
Sbjct: 122 IDLRFIEMLGREGIPFGIVFTKTDKLSAAQLA-----RSVERYKQVLGEQWEGLPPMFRS 176
Query: 284 SSVTNQGRDEIL 295
SS GR+EIL
Sbjct: 177 SSEKRTGREEIL 188
>gi|325954327|ref|YP_004237987.1| GTP-binding protein engB [Weeksella virosa DSM 16922]
gi|323436945|gb|ADX67409.1| GTP-binding protein engB [Weeksella virosa DSM 16922]
Length = 205
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 120/197 (60%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V AEF+KS+ +DCP LPE+A +GRSNVGKSSL+N L ++ LA TS TPGKTQ +
Sbjct: 3 VQSAEFIKSAQTYKDCPKPDLPEYAFIGRSNVGKSSLINMLTNKRDLAKTSGTPGKTQLL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F IN +WYL DLPGYGYA + R +++ DY R+ LV F+L+D+ +
Sbjct: 63 NTFLINSNWYLTDLPGYGYAKVSKTNRAGFERMIYDYLEFRTNLVCTFVLVDSRHEPQKN 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DL++ WLG QIP ++FTK DK K ++NLN ++ + ++ P TS
Sbjct: 123 DLKFMEWLGHKQIPFAIIFTKLDKLSSAK-----FQKNLNTYKRELLKTWEDLPMIFATS 177
Query: 285 SVTNQGRDEILLHMAQL 301
S + GR+E+L ++ L
Sbjct: 178 SSSFIGRNELLDYINTL 194
>gi|308808330|ref|XP_003081475.1| Predicted GTPase (ISS) [Ostreococcus tauri]
gi|116059938|emb|CAL55997.1| Predicted GTPase (ISS) [Ostreococcus tauri]
Length = 396
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 111/176 (63%), Gaps = 5/176 (2%)
Query: 127 EFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYGYA-A 185
E AL+GRSNVGKSSLLN + A+ S PG T +NH+ ++ W LVDLPGYGYA A
Sbjct: 126 EVALIGRSNVGKSSLLNLVTFGAGAAVVSAKPGTTCSMNHYSVDGRWRLVDLPGYGYAEA 185
Query: 186 APRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTK 245
P E+ WD FTK+YF R L V LLIDAS+P D +YA+WL +N+ P T+VFTK
Sbjct: 186 EPGEIEA-WDAFTKEYFATRENLAGVLLLIDASVPPTANDEKYANWLIENETPFTIVFTK 244
Query: 246 CDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQL 301
CD+ K K G E+N F+ ++ + P I TSSVT QGRDE+L ++ L
Sbjct: 245 CDRDKPK---GPSVEDNKAAFRAKLEERWHRLPSMISTSSVTTQGRDEVLKFISSL 297
>gi|302346369|ref|YP_003814667.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella
melaninogenica ATCC 25845]
gi|302150963|gb|ADK97224.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella
melaninogenica ATCC 25845]
Length = 198
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 118/197 (59%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +EF SS CP D E+A +GRSNVGKSSL+N L K LA TS PGKT I
Sbjct: 3 IKNSEFTISSPSLSKCPEDTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSSKPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN+ WYLVDLPGYGYA + + +R ++ Y L R LV+VF+LID + I
Sbjct: 63 NHFIINNEWYLVDLPGYGYAKSSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHEQQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E+ WLG++ +P +++FTK DK K + N + + +Q ++ PP+ +TS
Sbjct: 123 DREFVDWLGESNVPFSIIFTKADKLSPAK-----AKSNALLWMKKLQDRWEELPPYFITS 177
Query: 285 SVTNQGRDEILLHMAQL 301
+ GR+E+L ++ ++
Sbjct: 178 AENKTGREEVLNYIDEI 194
>gi|406882922|gb|EKD30602.1| putative GTP-binding protein engB, partial [uncultured bacterium]
Length = 199
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 125/198 (63%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +A F SS P+ LPEFA +GRSNVGKSSL+N+L ++ KLA TS TPGKTQ
Sbjct: 2 KIIKAIFSGSSQNVTGKPAQKLPEFAFIGRSNVGKSSLINALCQQGKLAHTSGTPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+NHF INDSWYLVDLPGYGYA + R K+Y L +F+L+D+ + +
Sbjct: 62 VNHFLINDSWYLVDLPGYGYAKISKADREKLAAINKNYINESEELKVLFVLLDSRLEIQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDL++ LG+ ++P L++TKCDK+ G +E + + +++ +++ PP ++
Sbjct: 122 IDLQFLITLGEAEVPFALIYTKCDKQ-----GVTSLKERVENNNKVLFEYWEELPPIFLS 176
Query: 284 SSVTNQGRDEILLHMAQL 301
S+ T +GR+E+L ++ +
Sbjct: 177 SAETGKGREEVLDYIESI 194
>gi|288802585|ref|ZP_06408024.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella
melaninogenica D18]
gi|288335113|gb|EFC73549.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella
melaninogenica D18]
Length = 198
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 118/197 (59%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +EF SS CP D E+A +GRSNVGKSSL+N L K LA TS PGKT I
Sbjct: 3 IKNSEFTISSPSLSKCPEDTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSSKPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN+ WYLVDLPGYGYA + + +R ++ Y L R LV+VF+LID + I
Sbjct: 63 NHFIINNDWYLVDLPGYGYAKSSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHEQQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E+ WLG++ +P +++FTK DK K + N + + +Q ++ PP+ +TS
Sbjct: 123 DREFVDWLGESNVPFSIIFTKADKLSPAK-----AKSNALLWMKKLQDRWEELPPYFITS 177
Query: 285 SVTNQGRDEILLHMAQL 301
+ GR+E+L ++ ++
Sbjct: 178 AENKTGREEVLNYIDEI 194
>gi|440747699|ref|ZP_20926955.1| GTP-binding protein EngB [Mariniradius saccharolyticus AK6]
gi|436483875|gb|ELP39903.1| GTP-binding protein EngB [Mariniradius saccharolyticus AK6]
Length = 202
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 120/202 (59%), Gaps = 6/202 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +A F S+ CP PE A +GRSNVGKSSL+N L K LA TS PGKTQ I
Sbjct: 2 IKKAIFSVSNSDYTKCPKTDKPEIAFIGRSNVGKSSLINMLAGVKDLAKTSGKPGKTQLI 61
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF I+ WY+VDLPGYGYA + ++ W+K + Y NR L++V +LID+ + + I
Sbjct: 62 NHFEIDGRWYMVDLPGYGYAVVSKSTKSSWEKMIRGYLTNRDNLIAVMVLIDSRLEPQKI 121
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DLE+ +W G++ +P L FTK DK G ++ + ++ F + + F P + +TS
Sbjct: 122 DLEFITWCGEHDVPFVLAFTKADKL-----GLEKTKVSIQRFLDAAKEIFGEEPQYFITS 176
Query: 285 SVTNQGRDEIL-LHMAQLRNYW 305
+ +G++E++ A++ Y+
Sbjct: 177 ANKREGKEELIKFFEAEISEYY 198
>gi|404404540|ref|ZP_10996124.1| GTP-binding protein YsxC [Alistipes sp. JC136]
Length = 198
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 115/192 (59%), Gaps = 5/192 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
Q+ +AEF SS R P D L + A +GRSNVGKSSL+N L R LA S TPGKT+
Sbjct: 2 QITKAEFKCSSERISQVPKDDLKDIAFIGRSNVGKSSLINMLTARGGLAKVSGTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+NHFRIND+WYLVDLPGYGYA + R ++ K DY L + +F+L D + +
Sbjct: 62 VNHFRINDTWYLVDLPGYGYARTSKAQRGEFSKLITDYILKCEKMHFLFVLADIRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDL + LG+N IP ++FTK DK K + ++++ F+ + ++ PP ++
Sbjct: 122 IDLRFIEMLGENGIPFAIIFTKADKLSKTQQ-----QKSVERFRAALAEQWEELPPMFVS 176
Query: 284 SSVTNQGRDEIL 295
SS GR+EIL
Sbjct: 177 SSEKGTGREEIL 188
>gi|288927638|ref|ZP_06421485.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral
taxon 317 str. F0108]
gi|288330472|gb|EFC69056.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral
taxon 317 str. F0108]
Length = 201
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 121/197 (61%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ ++ F S+ CP+D E+A +GRSNVGKSSL+N L K LA TS TPGKT I
Sbjct: 3 IKKSAFTLSAPSIRLCPTDNKIEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF INDSWYLVDLPGYG+A + ++ + Y L R LV++F+LID + I
Sbjct: 63 NHFIINDSWYLVDLPGYGFAKRSKTVQQKLQQMISSYILQREQLVNLFVLIDIRHEQQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E+ WLG++ +P T+VFTK DK G + ++N + + ++ ++ PP+ +TS
Sbjct: 123 DREFIDWLGESGVPFTIVFTKADKL-----GLVKAKQNAEKWMKQLEDSWEELPPYFITS 177
Query: 285 SVTNQGRDEILLHMAQL 301
S GR+E+L ++ ++
Sbjct: 178 SEKRIGREELLNYIDEI 194
>gi|336398689|ref|ZP_08579489.1| GTP-binding protein engB [Prevotella multisaccharivorax DSM 17128]
gi|336068425|gb|EGN57059.1| GTP-binding protein engB [Prevotella multisaccharivorax DSM 17128]
Length = 200
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 115/199 (57%), Gaps = 5/199 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ AE+ SS CP D EFA +GRSNVGKSSL+N L + K LA TS PGKT I
Sbjct: 3 ITTAEYSVSSPTVSHCPKDHRAEFAFIGRSNVGKSSLINMLCQHKGLAKTSAVPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN WYLVDLPGYGYA + R D+ + Y L R L +VF+LID + + I
Sbjct: 63 NHFIINREWYLVDLPGYGYAKRSKTDRDKLDRMIRSYILQREELSNVFVLIDIRLEQQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E+ WLG + IP +++FTK DK K + N + + +++ P + +TS
Sbjct: 123 DREFVDWLGASGIPFSIIFTKADKLSVSK-----AKANAQAWMNALLDTWESLPTYFITS 177
Query: 285 SVTNQGRDEILLHMAQLRN 303
+ GR+E+L ++ Q+ N
Sbjct: 178 ADRRTGREEVLDYIGQILN 196
>gi|395218427|ref|ZP_10402078.1| HSR1-like GTP-binding protein [Pontibacter sp. BAB1700]
gi|394454469|gb|EJF09119.1| HSR1-like GTP-binding protein [Pontibacter sp. BAB1700]
Length = 200
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 115/197 (58%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +A+F+ S+ R + CP PE+A +GRSNVGKSSL+N L +K LA TS++PGKTQ I
Sbjct: 3 IKEAKFLISNTRVDLCPEPNKPEYAFIGRSNVGKSSLINMLTEQKGLAKTSQSPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IND WYLVDLPGYGYA +E R W K Y R L VF+LID+ +
Sbjct: 63 NHFLINDQWYLVDLPGYGYAKVSKESREQWRKMINYYMQKRENLTCVFVLIDSRHEPMKV 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DL++ LG+ +P +VFTK DK+ K + + + +Q + P TS
Sbjct: 123 DLDFMQHLGELGVPFVIVFTKTDKQSATKT-----DSTIAAYARKMQETWDELPRMFKTS 177
Query: 285 SVTNQGRDEILLHMAQL 301
+ GR+EIL + ++
Sbjct: 178 AEKRTGREEILQFIEEV 194
>gi|291513697|emb|CBK62907.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Alistipes shahii
WAL 8301]
Length = 198
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 116/192 (60%), Gaps = 5/192 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
Q+ +AEF SS R P D L + A +GRSNVGKSSL+N L R LA S TPGKT+
Sbjct: 2 QITKAEFKCSSERISQVPKDDLKDIAFIGRSNVGKSSLINMLTARTGLAKVSGTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHFRIND+WYLVDLPGYGYA + R+++ K DY + + +F+L D + +
Sbjct: 62 INHFRINDAWYLVDLPGYGYARTSKTQRSEFSKLITDYVIKCEKMHFLFVLADIRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDL + LG+N IP ++FTK DK K + E+++ F+ + ++ PP ++
Sbjct: 122 IDLRFIEMLGENGIPFGIIFTKADKLSKTQR-----EKSVERFRTALAQQWEELPPMFVS 176
Query: 284 SSVTNQGRDEIL 295
SS GR+EIL
Sbjct: 177 SSEKAVGREEIL 188
>gi|340354163|ref|ZP_08676954.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella pallens
ATCC 700821]
gi|339607435|gb|EGQ12370.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella pallens
ATCC 700821]
Length = 204
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 116/197 (58%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +EF SS CP D E+A +GRSNVGKSSL+N L K LA TS PGKT I
Sbjct: 3 IKSSEFTLSSPSITKCPVDTKNEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN WY+VDLPGYGYA + +R ++ Y L R LV+VF+LID + I
Sbjct: 63 NHFIINKEWYIVDLPGYGYAKNSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHEQQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E+ WLGQ+ IP ++VFTK DK K + N + + ++ ++T PP+ +TS
Sbjct: 123 DREFVDWLGQSNIPFSIVFTKADKLSVGK-----AKANAEAWIKQLEDTWETTPPYFITS 177
Query: 285 SVTNQGRDEILLHMAQL 301
+ G++E+L ++ +
Sbjct: 178 AEKKSGKEELLNYIEAI 194
>gi|288925742|ref|ZP_06419673.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella buccae
D17]
gi|315608306|ref|ZP_07883295.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella buccae
ATCC 33574]
gi|402308788|ref|ZP_10827791.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. MSX73]
gi|288337397|gb|EFC75752.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella buccae
D17]
gi|315249936|gb|EFU29936.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella buccae
ATCC 33574]
gi|400374757|gb|EJP27671.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. MSX73]
Length = 202
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 120/198 (60%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ ++EF+ S+ R CP D E+A +GRSNVGKSSL+N L K LA TS TPGKT
Sbjct: 2 EIKKSEFIISAPRVSMCPKDDRLEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN+ WYLVDLPGYG+A + + ++ Y L R L +VF+LID + +
Sbjct: 62 INHFIINNEWYLVDLPGYGFAKRSKTVLKQLEQMIAGYILQRKQLANVFVLIDIRLDPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
ID E+ WLG++ +P +VFTK DK G + + N + +Q ++ PP+ +T
Sbjct: 122 IDREFIDWLGESNVPFAIVFTKADKL-----GPVKAKANAARWMTSLQDRWEELPPYFIT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
S+ GR+E+L ++ ++
Sbjct: 177 SAEKRTGREELLDYIDEI 194
>gi|303237178|ref|ZP_07323748.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella disiens
FB035-09AN]
gi|302482565|gb|EFL45590.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella disiens
FB035-09AN]
Length = 225
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +EF SS CP+D E+A +GRSNVGKSSL+N L K LA TS PGKT I
Sbjct: 3 IKNSEFSISSPTIAKCPNDTKNEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN WY+VDLPGYGYA + +R ++ Y L R LV+VF+LID + I
Sbjct: 63 NHFIINKEWYIVDLPGYGYAKNSKTVRNKLEQMIAQYLLQRKQLVNVFVLIDIRHEQQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E+ WLG++ IP ++VFTK DK K + N + + ++ ++ PP+ +TS
Sbjct: 123 DREFIDWLGKSNIPFSIVFTKADKLSVGK-----AKANAAAWMKKLEDTWEEIPPYFVTS 177
Query: 285 SVTNQGRDEILLHMAQL 301
S + GR+E+L ++ ++
Sbjct: 178 SESKLGREEVLDYIGRI 194
>gi|345884488|ref|ZP_08835894.1| GTP-binding protein engB [Prevotella sp. C561]
gi|345042700|gb|EGW46794.1| GTP-binding protein engB [Prevotella sp. C561]
Length = 199
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 118/197 (59%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +EF SS CP D E+A +GRSNVGKSSL+N L K LA TS PGKT I
Sbjct: 3 IKNSEFTISSPSLAKCPEDSKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN+ WYLVDLPGYGYA + + +R ++ Y L R LV+VF+LID + I
Sbjct: 63 NHFIINNEWYLVDLPGYGYAKSSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHEQQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E+ WLG++ +P +++FTK DK K + N + + +Q ++ PP+ +TS
Sbjct: 123 DREFVDWLGESNVPFSIIFTKADKLSPAK-----AKSNALLWMKKLQDRWEELPPYFITS 177
Query: 285 SVTNQGRDEILLHMAQL 301
+ G++E+L ++ ++
Sbjct: 178 AENKTGKEEVLDYIDRI 194
>gi|307566351|ref|ZP_07628790.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella amnii CRIS
21A-A]
gi|307344928|gb|EFN90326.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella amnii CRIS
21A-A]
Length = 201
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 117/197 (59%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +EF SS CP+D PE+A +GRSNVGKSSL+N L K LA TS PGKT I
Sbjct: 3 IKDSEFTISSPTVFKCPNDNKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN WYLVDLPGYGYA + + +R ++ Y L R L++VF+LID + I
Sbjct: 63 NHFIINKEWYLVDLPGYGYAKSSKSVRNKLEQMIAQYILQRKQLINVFVLIDIRHEQQTI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E+ WLG++ IP +++FTK DK K + N + ++ ++ PP+ +TS
Sbjct: 123 DREFVDWLGKSNIPFSIIFTKADKLTTGK-----AKSNALLWMRKLEDTWEELPPYFITS 177
Query: 285 SVTNQGRDEILLHMAQL 301
+ G++E+L ++ +
Sbjct: 178 AEKKTGKEEVLNYIESI 194
>gi|260911896|ref|ZP_05918462.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral
taxon 472 str. F0295]
gi|260634012|gb|EEX52136.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral
taxon 472 str. F0295]
Length = 201
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 120/197 (60%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ ++ F S+ CP D E+A +GRSNVGKSSL+N L K LA TS TPGKT I
Sbjct: 3 IKKSAFTLSAPSIGLCPKDNKIEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF INDSWYLVDLPGYG+A + ++ + Y L R LV++F+LID + I
Sbjct: 63 NHFIINDSWYLVDLPGYGFAKRSKTVQQKLQQMISSYILQREQLVNLFVLIDIRHEQQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E+ WLG++ +P T+VFTK DK G + ++N + + ++ ++ PP+ +TS
Sbjct: 123 DREFIDWLGESGVPFTIVFTKADKL-----GLVKAKQNAEKWMKQLEDSWEEQPPYFITS 177
Query: 285 SVTNQGRDEILLHMAQL 301
S GR+E+L ++ ++
Sbjct: 178 SEKRIGREELLNYIDEI 194
>gi|406025117|ref|YP_006705418.1| GTP-binding protein EngB [Cardinium endosymbiont cEper1 of Encarsia
pergandiella]
gi|404432716|emb|CCM09998.1| Probable GTP-binding protein EngB [Cardinium endosymbiont cEper1 of
Encarsia pergandiella]
Length = 201
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 115/192 (59%), Gaps = 5/192 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ V SS R + CP + PE A +GRSNVGKSSL+N+L++RK+LA SK PGKT+
Sbjct: 2 KIHSVRLVSSSARYQACPREARPEVAFIGRSNVGKSSLINALLQRKQLARVSKMPGKTKL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
I+HF +N+ Y VDLPGYG+A R + W+K + Y L R +V+VFLL+DA I +
Sbjct: 62 IHHFLVNNQIYFVDLPGYGWAQVGRATKIQWEKMLQSYLLYRPNMVTVFLLMDAKIGLQS 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDL WLG ++IP +V TK DK+ K+ +++ +Q + T PP M
Sbjct: 122 IDLGCIGWLGVHRIPFVIVLTKADKKNKRV-----VQKHYMALTATLQEDWATIPPIFMV 176
Query: 284 SSVTNQGRDEIL 295
S+ G + +L
Sbjct: 177 SAHDRVGLENLL 188
>gi|424899417|ref|ZP_18322959.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Prevotella bivia
DSM 20514]
gi|388591617|gb|EIM31856.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Prevotella bivia
DSM 20514]
Length = 206
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 116/197 (58%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +EF S+ CP D PE+A +GRSNVGKSSL+N L K LA TS PGKT I
Sbjct: 3 IKNSEFTISAPTVSKCPEDNKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSSKPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN WYLVDLPGYGYA + +R ++ Y L R L++VF+LID + I
Sbjct: 63 NHFIINKEWYLVDLPGYGYAKNSKSVRAKLEQMIAQYILQRKQLMNVFVLIDIRHEQQTI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E+ WLG++ +P +++FTK DK R + N + + ++ ++ PP+ +TS
Sbjct: 123 DREFIDWLGKSNVPFSIIFTKADKLT-----AGRAKSNALLWMKKLEDTWEELPPYFITS 177
Query: 285 SVTNQGRDEILLHMAQL 301
+ G++E+L ++ +
Sbjct: 178 AEKKTGKEEVLDYIESI 194
>gi|282858564|ref|ZP_06267735.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella bivia
JCVIHMP010]
gi|282588689|gb|EFB93823.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella bivia
JCVIHMP010]
Length = 201
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 116/197 (58%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +EF S+ CP D PE+A +GRSNVGKSSL+N L K LA TS PGKT I
Sbjct: 3 IKNSEFTISAPTVSKCPEDNKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSSKPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN WYLVDLPGYGYA + +R ++ Y L R L++VF+LID + I
Sbjct: 63 NHFIINKEWYLVDLPGYGYAKNSKSVRAKLEQMIAQYILQRKQLMNVFVLIDIRHEQQTI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E+ WLG++ +P +++FTK DK R + N + + ++ ++ PP+ +TS
Sbjct: 123 DREFIDWLGKSNVPFSIIFTKADKLT-----AGRAKSNALLWMKKLEDTWEELPPYFITS 177
Query: 285 SVTNQGRDEILLHMAQL 301
+ G++E+L ++ +
Sbjct: 178 AEKKTGKEEVLDYIESI 194
>gi|223557993|gb|ACM90999.1| GTP-binding cell division protein [uncultured bacterium URE4]
Length = 198
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 117/196 (59%), Gaps = 5/196 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A F SS + E P+ LPEFA +GRSNVGKSSL+N+L KLA TS+TPGKTQ
Sbjct: 2 KIRTAIFSGSSTKVEQKPARKLPEFAFIGRSNVGKSSLINALTGNSKLAKTSQTPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+NHF IND+WYLVDLPGYGYA P + R DY LV +F+L+D+ +
Sbjct: 62 VNHFLINDNWYLVDLPGYGYARLPDKERAKLRHIIWDYVNRSEELVMLFVLLDSRHDMQE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
+DL + S LG+ IP L+FTK DK+ + + +E ++ PP ++
Sbjct: 122 VDLRFISELGEKGIPFGLIFTKADKQGATVTAAQVEKNKARLLEE-----WEELPPVFIS 176
Query: 284 SSVTNQGRDEILLHMA 299
SSV+ GR+EIL ++
Sbjct: 177 SSVSGLGREEILNYIG 192
>gi|83595990|gb|ABC25349.1| GTP-binding protein [uncultured marine bacterium Ant29B7]
Length = 215
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 117/196 (59%), Gaps = 6/196 (3%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+A F+KSS R E+CP +PE+A +GRSNVGKSSL+N LV K LA S PGKTQ INH
Sbjct: 13 KASFIKSSARNEECPDLHVPEYAFIGRSNVGKSSLINRLVGNKYLAKISGRPGKTQLINH 72
Query: 167 FRINDS-WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPID 225
F I D W LVDLPGYGYA + RT++ + Y NR LV+VF+L+D + +D
Sbjct: 73 FSIEDGQWALVDLPGYGYAKVSKIQRTEFSRMIAYYLRNRKNLVNVFVLVDGRHEPQKLD 132
Query: 226 LEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSS 285
L + LG IP ++VFTK DK +G + N +E + PP +TS+
Sbjct: 133 LAFVKKLGNWGIPFSIVFTKMDKLSNSDSGKNQALMNSTLLKE-----WDNLPPMFLTSA 187
Query: 286 VTNQGRDEILLHMAQL 301
+ GR E+L ++++L
Sbjct: 188 ESGLGRSELLAYISKL 203
>gi|387789793|ref|YP_006254858.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Solitalea
canadensis DSM 3403]
gi|379652626|gb|AFD05682.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Solitalea
canadensis DSM 3403]
Length = 213
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 117/191 (61%), Gaps = 5/191 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ AEFV S+ + P LPE+A +GRSNVGKSSL+N L +K LA TS+TPGKTQ I
Sbjct: 3 IKSAEFVCSNTQVSKLPPPSLPEYAFIGRSNVGKSSLINMLTGKKGLAKTSQTPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF+IN++W+LVDLPGYG+A + W KF + Y R L V +L+D+ + + I
Sbjct: 63 NHFQINNNWFLVDLPGYGFARVSKTSAEKWGKFIRQYLSKRENLQCVMVLVDSRLEPQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DL++ LG+ +P +VFTK DK+ K K +N+ F+ + ++ P +TS
Sbjct: 123 DLQFIDSLGELGLPFVIVFTKSDKQSKGKTA-----QNVQLFKNELLKTWEEVPQLFVTS 177
Query: 285 SVTNQGRDEIL 295
+ GR+E+L
Sbjct: 178 AEDKSGREELL 188
>gi|406875419|gb|EKD25211.1| putative GTP-binding protein engB [uncultured bacterium (gcode 4)]
Length = 197
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 123/202 (60%), Gaps = 9/202 (4%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ A FVKS+ + E+CP LPEFA++GRSNVGKSSL+N++ KL+ S TPGKT+ I
Sbjct: 3 IRSAVFVKSASKLEECPETNLPEFAMIGRSNVGKSSLINTIANHSKLSKVSVTPGKTKLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
+F +ND WYLVDLPGYGYA ++ R T DYF+ R L VF+LID +I + I
Sbjct: 63 GYFLMNDEWYLVDLPGYGYAQIGQKNRMHRLGITHDYFIGRENLKKVFVLIDGNILPQSI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLND--FQELIQGFFQTAPPWIM 282
DL++ L Q IP +V TK DK +K E +L+ F+E + P
Sbjct: 123 DLDFIHSLDQKNIPFDIVMTKIDKATQK-------EFSLHTRLFKEELAKIVTHMPKIFP 175
Query: 283 TSSVTNQGRDEILLHMAQLRNY 304
S+VT +G++++L ++ +L N+
Sbjct: 176 ISNVTKRGKEKLLDYIEELINW 197
>gi|373501009|ref|ZP_09591377.1| GTP-binding protein engB [Prevotella micans F0438]
gi|371950861|gb|EHO68713.1| GTP-binding protein engB [Prevotella micans F0438]
Length = 200
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 114/191 (59%), Gaps = 5/191 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +AEF+ S+ + CP EFA +GRSNVGKSSL+N L K LA TS PGKT I
Sbjct: 3 IKKAEFIISAPDFKKCPQHSGLEFAFIGRSNVGKSSLINMLCDHKGLAKTSAMPGKTLLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN+ W+LVDLPGYGYA + +R ++ Y L+R LV+VF+LID + I
Sbjct: 63 NHFLINNEWHLVDLPGYGYARNSKSMRNKLEQMIAQYILHREQLVNVFVLIDIRHEQQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E+ WLG+N +P +++FTK DK + + N + + + ++ PP +TS
Sbjct: 123 DREFIDWLGKNGVPFSIIFTKADKLRPGQ-----ANANAQAWLKALDDGWEEYPPHFITS 177
Query: 285 SVTNQGRDEIL 295
+ GRDE+L
Sbjct: 178 ATNKTGRDELL 188
>gi|354603382|ref|ZP_09021380.1| ribosome biogenesis GTP-binding protein YsxC [Alistipes
indistinctus YIT 12060]
gi|353348762|gb|EHB93029.1| ribosome biogenesis GTP-binding protein YsxC [Alistipes
indistinctus YIT 12060]
Length = 212
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 113/191 (59%), Gaps = 5/191 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ A F SS + CP+D EFA +GRSNVGKSSL+N L LA S TPGKT+ I
Sbjct: 3 ITSAVFRCSSQKLSQCPADNRWEFAFIGRSNVGKSSLINMLTDSPALAKVSATPGKTRLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF IN WYLVDLPGYGYA + R ++ K DY L R + +F+L+D+ + + I
Sbjct: 63 NHFLINGCWYLVDLPGYGYARVSKGQRKEFSKLILDYILKREQMYFLFVLVDSRLEPQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DL++ S LG++ IP +VFTKCDK + E N+ ++ + ++ PP TS
Sbjct: 123 DLDFMSLLGEHGIPFGIVFTKCDKLSANQT-----ESNIARYRRTLLESWEELPPIFRTS 177
Query: 285 SVTNQGRDEIL 295
S QGR+ IL
Sbjct: 178 SEKRQGREPIL 188
>gi|298373028|ref|ZP_06983018.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroidetes oral
taxon 274 str. F0058]
gi|298275932|gb|EFI17483.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroidetes oral
taxon 274 str. F0058]
Length = 200
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 121/198 (61%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
Q+ +AEFV S+ CP E A +GRSNVGKSSL+N L +K LA TS PGKT
Sbjct: 2 QINEAEFVISNSDFRRCPQGDTTEVAFIGRSNVGKSSLINYLTGKKDLAKTSSKPGKTLL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF IN +++VDLPGYG+A + R K +DY + R L ++F+L+D+ + +
Sbjct: 62 INHFLINKRFHIVDLPGYGFAKVSKTHREKLRKIIEDYIMFRPQLANLFVLLDSRLSPQA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDLE+ WLG +P ++VFTK DK+ + R +N+ ++ + +++ PP MT
Sbjct: 122 IDLEFMEWLGLGGVPFSIVFTKTDKQSR-----SRLMQNIETYRTKLYETWESLPPIFMT 176
Query: 284 SSVTNQGRDEILLHMAQL 301
SS +GR+EIL ++ ++
Sbjct: 177 SSEKREGREEILDYIEKI 194
>gi|374372859|ref|ZP_09630520.1| GTP-binding protein engB [Niabella soli DSM 19437]
gi|373234935|gb|EHP54727.1| GTP-binding protein engB [Niabella soli DSM 19437]
Length = 211
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 119/210 (56%), Gaps = 17/210 (8%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A ++KSS CP PE+A +GRSNVGKSSL+N L +K LA TS PGKTQ
Sbjct: 2 EIISATYIKSSPDYGQCPKADRPEYAFIGRSNVGKSSLINMLCNKKALAKTSAAPGKTQL 61
Query: 164 INHFRINDS------------WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSV 211
INHF I + WYLVDLPGYGYA ++ R W + Y L R L+++
Sbjct: 62 INHFEIISATRDKSGKQEKRPWYLVDLPGYGYAKVSQKQRKSWSAMIEKYILKRENLITL 121
Query: 212 FLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQ 271
F+LID+ + IDLE+ + LG IP LVFTK DK K N++ F ++
Sbjct: 122 FVLIDSRHEPQLIDLEFINQLGAWSIPFALVFTKADKNKPGAT-----IRNVDAFLNKLR 176
Query: 272 GFFQTAPPWIMTSSVTNQGRDEILLHMAQL 301
++ PP +TS++ GR+E+L ++ +L
Sbjct: 177 ETWEALPPHFITSAIDKNGREEVLEYVGKL 206
>gi|392964182|ref|ZP_10329603.1| ribosome biogenesis GTP-binding protein YsxC [Fibrisoma limi BUZ 3]
gi|387847077|emb|CCH51647.1| ribosome biogenesis GTP-binding protein YsxC [Fibrisoma limi BUZ 3]
Length = 201
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 113/191 (59%), Gaps = 5/191 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V QA+FV S+ CP+ PE+A +GRSNVGKSSL+N L R LA S PGKTQ I
Sbjct: 3 VKQAQFVISNSDPAKCPAPDRPEYAFIGRSNVGKSSLINMLTSRTSLAKISGKPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF I++ WYLVDLPGYGYA + R + Y RS L+ F+L+D+ I + I
Sbjct: 63 NHFLIDNEWYLVDLPGYGYAQVSKTERDKFAALINGYLTTRSNLLCTFVLVDSRIAPQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DL++ + LG+ IP +V TK +K K + L ++ + ++ AP I+TS
Sbjct: 123 DLDFMTNLGEQGIPFVIVMTKSEKLSATK-----LQATLEQYRATLLETWEEAPQIIVTS 177
Query: 285 SVTNQGRDEIL 295
++T GR+E+L
Sbjct: 178 AITAAGREEVL 188
>gi|212551105|ref|YP_002309422.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus
Azobacteroides pseudotrichonymphae genomovar. CFP2]
gi|212549343|dbj|BAG84011.1| GTPase EngB [Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
Length = 209
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 113/198 (57%), Gaps = 6/198 (3%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ A FV + CP DG PE+A +GRSNVGKSSL+N L +K LALTS PGKTQ I
Sbjct: 11 IKNAVFVVGNTDVGKCPRDGFPEYAFIGRSNVGKSSLINMLTGQKGLALTSSIPGKTQLI 70
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRST-LVSVFLLIDASIPAKP 223
N+F IN+ WYLVDLPGYGYA ++ R + +Y R L +F+LID +
Sbjct: 71 NYFLINNEWYLVDLPGYGYAQGGKQKRRTLQRIIDNYLCQRKKELTCIFVLIDCRHNPQK 130
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D E+ LG N P +VFTK DK K +EN++ +Q + ++ P +T
Sbjct: 131 NDTEFIQQLGGNGFPFVIVFTKIDKLSNKS-----LKENIDVYQSTLLKNWEELPSIFVT 185
Query: 284 SSVTNQGRDEILLHMAQL 301
SS GRDEIL ++ ++
Sbjct: 186 SSERKIGRDEILNYIEEI 203
>gi|110639099|ref|YP_679308.1| ribosome biogenesis GTP-binding protein YsxC [Cytophaga
hutchinsonii ATCC 33406]
gi|119369188|sp|Q11RJ8.1|ENGB_CYTH3 RecName: Full=Probable GTP-binding protein EngB
gi|110281780|gb|ABG59966.1| GTP-binding protein [Cytophaga hutchinsonii ATCC 33406]
Length = 199
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 116/194 (59%), Gaps = 5/194 (2%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A+F+ S + CP PE+A +GRSNVGKSSL+NSL K LA+TS PGKTQ IN F
Sbjct: 5 AKFISSYDDYQKCPEITKPEYAFIGRSNVGKSSLINSLTGVKNLAMTSSKPGKTQLINLF 64
Query: 168 RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
I ++W L DLPGYG+A A + R W + DY NR+ L +VFLL+D+ DLE
Sbjct: 65 TIEETWILADLPGYGFAKASQSSRIKWGRMVHDYLKNRTNLTTVFLLVDSRHEPMKSDLE 124
Query: 228 YASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVT 287
+WL N IP +L+FTK DK+ + + L + +++ ++ P +TSS +
Sbjct: 125 QITWLASNGIPFSLIFTKIDKQSL-----TQTNKILASWTKVLSENWEELPKMFLTSSES 179
Query: 288 NQGRDEILLHMAQL 301
+G +E+L ++ ++
Sbjct: 180 GKGTEELLTYIDEI 193
>gi|390948002|ref|YP_006411762.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Alistipes
finegoldii DSM 17242]
gi|390424571|gb|AFL79077.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Alistipes
finegoldii DSM 17242]
Length = 197
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 118/200 (59%), Gaps = 5/200 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
Q+ +AEF SS R P D L + A +GRSNVGKSSL+N L R+ LA S TPGKT+
Sbjct: 2 QINKAEFKCSSERISQVPKDALKDIAFIGRSNVGKSSLINMLTGRQGLAKVSGTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF I+++WYLVDLPGYGYA + R+++ K DY L + +F+L D + +
Sbjct: 62 INHFLIDNAWYLVDLPGYGYARTSKTKRSEFSKIITDYVLKCEKMHFLFVLADIRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDL++ LG N IP ++FTK DK K + E+++ ++ + ++ P ++
Sbjct: 122 IDLQFIEMLGMNGIPFAVIFTKADKLSKTQR-----EKSVERYRAALAEQWEELPRMFVS 176
Query: 284 SSVTNQGRDEILLHMAQLRN 303
SS GR+EIL + + N
Sbjct: 177 SSQHGTGREEILGFIGECLN 196
>gi|334364138|ref|ZP_08513135.1| ribosome biogenesis GTP-binding protein YsxC [Alistipes sp. HGB5]
gi|313159636|gb|EFR58994.1| ribosome biogenesis GTP-binding protein YsxC [Alistipes sp. HGB5]
Length = 197
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 118/200 (59%), Gaps = 5/200 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
Q+ +AEF SS R P D L + A +GRSNVGKSSL+N L R+ LA S TPGKT+
Sbjct: 2 QINKAEFKCSSERISQVPKDALKDIAFIGRSNVGKSSLINMLTGRQGLAKVSGTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
INHF I+++WYLVDLPGYGYA + R+++ K DY L + +F+L D + +
Sbjct: 62 INHFLIDNAWYLVDLPGYGYARTSKTKRSEFSKIITDYVLKCEKMHFLFVLADLRLEPQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDL++ LG N IP ++FTK DK K + E+++ ++ + ++ P ++
Sbjct: 122 IDLQFIEMLGMNGIPFAVIFTKADKLSKTQR-----EKSVERYRAALAEQWEELPRMFVS 176
Query: 284 SSVTNQGRDEILLHMAQLRN 303
SS GR+EIL + + N
Sbjct: 177 SSQHGTGREEILGFIGECLN 196
>gi|334136423|ref|ZP_08509889.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp.
HGF7]
gi|333606033|gb|EGL17381.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp.
HGF7]
Length = 213
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 113/191 (59%), Gaps = 7/191 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V QAEF+ S+V P D LPE AL GRSNVGKSSL+N ++ RK LA TS PGKTQ
Sbjct: 2 KVNQAEFIISAVGPGQYPEDALPEIALAGRSNVGKSSLINRMISRKNLARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N++RIND Y VDLPGYGYA + R +W KF ++Y L R L +V L+D P
Sbjct: 62 LNYYRINDDLYFVDLPGYGYAKVSKTKRAEWGKFIENYLLKREPLKAVMQLVDLRHPPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D +WL +P+ +V TK DK K K ++ + + D E F + P+I+
Sbjct: 122 DDQAMYTWLKHMDVPVIVVATKADKVPKGK--WQKHAKIIKDDLE-----FDRSGPFIIF 174
Query: 284 SSVTNQGRDEI 294
SS T G+DE+
Sbjct: 175 SSETGMGKDEL 185
>gi|284038921|ref|YP_003388851.1| ribosome biogenesis GTP-binding protein YsxC [Spirosoma linguale
DSM 74]
gi|283818214|gb|ADB40052.1| ribosome biogenesis GTP-binding protein YsxC [Spirosoma linguale
DSM 74]
Length = 201
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 119/203 (58%), Gaps = 5/203 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V QAEF S+ CP PE+A +GRSNVGKSSL+N L R LA S PGKTQ I
Sbjct: 3 VKQAEFFVSNSDPAKCPKPDRPEYAFIGRSNVGKSSLINMLTSRSSLAKISGKPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF I++ WYLVDLPGYGYA + R + Y +R L+ +F+L+D+ I + +
Sbjct: 63 NHFIIDNEWYLVDLPGYGYAQVSKTEREKFAALIDGYLTSRPNLLCIFVLVDSRIAPQKL 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DL++ + LG+ +P +VFTK +K G + + L +++ + ++ AP + +TS
Sbjct: 123 DLDFMANLGERGLPFVIVFTKTEKL-----GPTKLQATLETYRDRLLEDWEEAPQFFVTS 177
Query: 285 SVTNQGRDEILLHMAQLRNYWLK 307
+VT GR++IL + L + K
Sbjct: 178 AVTAVGREDILSFIRPLNEGYKK 200
>gi|375148737|ref|YP_005011178.1| GTP-binding protein engB [Niastella koreensis GR20-10]
gi|361062783|gb|AEW01775.1| GTP-binding protein engB [Niastella koreensis GR20-10]
Length = 217
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 116/204 (56%), Gaps = 18/204 (8%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ A ++ SS CP PE+A +GRSNVGKSSL+N L +KLA TS PGKTQ I
Sbjct: 3 IQSATYLISSPDYTKCPKADRPEYAFIGRSNVGKSSLINMLCDNQKLAKTSSAPGKTQLI 62
Query: 165 NHFRIN-------------DSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSV 211
NHF I DSWYLVDLPGYG+A + R W++ ++Y R L+SV
Sbjct: 63 NHFDIKSYPQAHVGGSVKPDSWYLVDLPGYGFAKVSQSTRKQWEQMIENYLRKRENLISV 122
Query: 212 FLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQ 271
F+LID+ + +DL++ LG+ ++P L FTK DK + K +N+ DF + ++
Sbjct: 123 FVLIDSRHNPQKLDLDFCDQLGKWEVPFCLAFTKADKETQ-----KVVSKNVKDFLDAMR 177
Query: 272 GFFQTAPPWIMTSSVTNQGRDEIL 295
+Q P +TS+ GRD++L
Sbjct: 178 KTWQFLPQSFVTSAEKKMGRDKML 201
>gi|357040205|ref|ZP_09101994.1| GTP-binding protein engB [Desulfotomaculum gibsoniae DSM 7213]
gi|355356869|gb|EHG04650.1| GTP-binding protein engB [Desulfotomaculum gibsoniae DSM 7213]
Length = 202
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 111/192 (57%), Gaps = 7/192 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A+FV S+ + CP+ PE AL GRSNVGKSSL N LV RK+LA TS TPG+TQ
Sbjct: 2 KITSADFVTSATNLDKCPAGSHPEVALAGRSNVGKSSLFNVLVNRKRLARTSNTPGRTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F IND +LVDLPGYG+A P ++ W K + Y R L V LL+D
Sbjct: 62 INFFIINDKLHLVDLPGYGFAKVPVRVKAQWGKMIEGYLAGREQLRGVILLVDVRHKPTQ 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D + +WL +IP +V TK DK + R +NL ++ +Q A P ++
Sbjct: 122 DDQQMYNWLKAYRIPTAVVATKADKLSR-----GRAIQNLAVVRKNLQ--LADADPLVLF 174
Query: 284 SSVTNQGRDEIL 295
S+VT QG+++IL
Sbjct: 175 SAVTGQGKEDIL 186
>gi|225166344|ref|ZP_03728026.1| GTPase EngB [Diplosphaera colitermitum TAV2]
gi|224799414|gb|EEG17961.1| GTPase EngB [Diplosphaera colitermitum TAV2]
Length = 213
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 115/198 (58%), Gaps = 5/198 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A F KS+ P G EFA +GRSNVGKSSLLN L +K LA S TPGKT+
Sbjct: 18 KIKTAVFEKSAPNLATSPVWGCREFAFIGRSNVGKSSLLNLLTEQKDLAKVSATPGKTRM 77
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F+IN++W LVDLPGYG+A + R+D+++ Y R L VF+LID+ +P +
Sbjct: 78 INFFKINNAWSLVDLPGYGFAKVAQHKRSDFNQAVARYLEKRDNLACVFVLIDSRLPPQQ 137
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDL++ WL P L+FTK DK+ + K ++ F E + + PP + +
Sbjct: 138 IDLDFIQWLEGTGRPFALIFTKTDKQSPTQTRAK-----ISLFTEALAEWRTEPPPILTS 192
Query: 284 SSVTNQGRDEILLHMAQL 301
SS T GR EIL +A +
Sbjct: 193 SSKTKSGRREILEFIAGM 210
>gi|449458692|ref|XP_004147081.1| PREDICTED: GTP-binding protein At2g22870-like [Cucumis sativus]
Length = 225
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 88/114 (77%), Gaps = 3/114 (2%)
Query: 69 LFVPPETEVSIDDSSLSTRILKGSNIVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEF 128
LF+PP V DD S IL GSNIVL YA D++V + EFVKSS R DCP D PEF
Sbjct: 115 LFIPPG--VDADDIS-DEMILPGSNIVLGPYAGDSRVKEVEFVKSSARARDCPKDSKPEF 171
Query: 129 ALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYG 182
A++GRSNVGKSSL+N+LVR+K++ALTSK PGKTQ INHF +N SWY+VDLPGYG
Sbjct: 172 AILGRSNVGKSSLINALVRKKEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYG 225
>gi|225175196|ref|ZP_03729192.1| small GTP-binding protein [Dethiobacter alkaliphilus AHT 1]
gi|225169372|gb|EEG78170.1| small GTP-binding protein [Dethiobacter alkaliphilus AHT 1]
Length = 197
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 109/193 (56%), Gaps = 11/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEF+ S+ E P+D LPE A VGRSNVGKS+LLNSLV RKKLALTS PGKT+
Sbjct: 2 KIKSAEFIISAAGAEQFPTDMLPEVAFVGRSNVGKSTLLNSLVNRKKLALTSGNPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F IN+++Y DLPGYG+A E++ W ++Y R TL V L+D P
Sbjct: 62 INFFLINEAFYFADLPGYGFARVSHEMKKQWGLLIENYLQTRETLQVVAQLVDLRHPPTA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
DL WL IP +V TK DK R ++ K+ E L + P I
Sbjct: 122 DDLAMYQWLIHFNIPTIIVATKADKISRGNRQKHVKQVREGLG---------LGSQGPVI 172
Query: 282 MTSSVTNQGRDEI 294
M S+ T +G+D+I
Sbjct: 173 MFSAKTGEGKDDI 185
>gi|189502027|ref|YP_001957744.1| hypothetical protein Aasi_0617 [Candidatus Amoebophilus asiaticus
5a2]
gi|238692308|sp|B3ES13.1|ENGB_AMOA5 RecName: Full=Probable GTP-binding protein EngB
gi|189497468|gb|ACE06015.1| hypothetical protein Aasi_0617 [Candidatus Amoebophilus asiaticus
5a2]
Length = 210
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 114/197 (57%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +A FV SS + CP E A +GRSNVGKSSL+N ++ +KKLA TS PGKTQ I
Sbjct: 3 IQEAIFVTSSATYKKCPPADKAEIAFIGRSNVGKSSLVNMILGQKKLAKTSARPGKTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
NHF +N +YLVDLPGYG+A A + R W+K Y L R L +F+L+D +P + I
Sbjct: 63 NHFLVNQKYYLVDLPGYGWAQASKTQRIGWNKMVNQYLLYRENLACLFVLLDIRLPPQKI 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DL + ++L N IP +V TK DK K ++ L F+ + + + +++TS
Sbjct: 123 DLLFINFLIDNDIPFAIVLTKADKISK-----QQVVNQLATFKRTLAPSTKESLNYVVTS 177
Query: 285 SVTNQGRDEILLHMAQL 301
S G+ E L + Q+
Sbjct: 178 SKNQAGKIEALNCIGQI 194
>gi|297616506|ref|YP_003701665.1| ribosome biogenesis GTP-binding protein YsxC [Syntrophothermus
lipocalidus DSM 12680]
gi|297144343|gb|ADI01100.1| ribosome biogenesis GTP-binding protein YsxC [Syntrophothermus
lipocalidus DSM 12680]
Length = 198
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 113/201 (56%), Gaps = 9/201 (4%)
Query: 101 RDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGK 160
++ +V +AEF S V E P+ GLPE AL GRSNVGKSSL+N L R+ LALTS TPGK
Sbjct: 2 KNMRVKKAEFKGSYVDIESLPASGLPEIALAGRSNVGKSSLINCLANRRNLALTSSTPGK 61
Query: 161 TQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIP 220
T+ IN++ +D+W+LVDLPGYGYA + R W + Y R L V ++D
Sbjct: 62 TRTINYYLFDDAWFLVDLPGYGYAKVSQAERKRWSLLIEKYLKERRQLKGVVQVVDIRHH 121
Query: 221 AKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPW 280
D + WLG +QIP T+V TK DK + K IQ + + P
Sbjct: 122 PTETDKLMSEWLGYHQIPRTVVATKADKIARGK---------WKTQLAAIQRELRLSDPP 172
Query: 281 IMTSSVTNQGRDEILLHMAQL 301
+ SS+T +GRDE++ + ++
Sbjct: 173 LCFSSLTGEGRDELVRAIGEM 193
>gi|193215228|ref|YP_001996427.1| ribosome biogenesis GTP-binding protein YsxC [Chloroherpeton
thalassium ATCC 35110]
gi|238692681|sp|B3QS35.1|ENGB_CHLT3 RecName: Full=Probable GTP-binding protein EngB
gi|193088705|gb|ACF13980.1| GTP-binding protein HSR1-related [Chloroherpeton thalassium ATCC
35110]
Length = 193
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 111/194 (57%), Gaps = 13/194 (6%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEF KS R ED P DGLPE A GRSNVGKSSL+N+L+ +K LA S TPGKT+
Sbjct: 2 KIESAEFYKSVTRLEDLPKDGLPEIAFAGRSNVGKSSLMNTLMGKKDLARASATPGKTRE 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F +N +Y VDLPGYG+A + L+ +W + + Y +R+ L + LLID+ PA P
Sbjct: 62 INFFLVNGKYYFVDLPGYGFAKVSKSLQENWQQLMEGYLKSRAELKLIVLLIDSRHPALP 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKK--KNGGKRPEENLNDFQELIQGFFQTAPPWI 281
IDLE +L +V TK DK + + E+ DF E I F
Sbjct: 122 IDLEMNEFLSFFGRRFAIVRTKTDKLNQSALAKSKRESEKAFYDF-EFIMDF-------- 172
Query: 282 MTSSVTNQGRDEIL 295
SSVT +G+ E+L
Sbjct: 173 --SSVTGKGKKELL 184
>gi|294783777|ref|ZP_06749101.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp.
1_1_41FAA]
gi|294480655|gb|EFG28432.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp.
1_1_41FAA]
Length = 194
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 119/202 (58%), Gaps = 12/202 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPS--DGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
++ +A+FVKS+V +D P D + EFA VGRSNVGKSSL+NSL R KLA TSKTPG+T
Sbjct: 2 KIKKADFVKSAVYEKDYPEQLDKM-EFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRT 60
Query: 162 QCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
Q IN+F IND +Y+VDLPGYG+A P+E++ W + + Y ++ + VF+L+D
Sbjct: 61 QLINYFLINDEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKL-VFVLLDIRRVP 119
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+E WL N++ ++FTK DK + + E FF
Sbjct: 120 SDEDIEMLEWLEYNEMDYKIIFTKIDKLSNNERAKQLKAIKTRLVFEKEDVFFH------ 173
Query: 282 MTSSVTNQGRDEILLHMAQLRN 303
SS+TN+GRDEIL M + N
Sbjct: 174 --SSLTNKGRDEILTFMEEKLN 193
>gi|333977881|ref|YP_004515826.1| GTP-binding protein engB [Desulfotomaculum kuznetsovii DSM 6115]
gi|333821362|gb|AEG14025.1| GTP-binding protein engB [Desulfotomaculum kuznetsovii DSM 6115]
Length = 194
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 106/191 (55%), Gaps = 9/191 (4%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ AEFVKS V + CP+ G PE AL GRSNVGKSSLLN LV R+ LA TS TPG+T+ +
Sbjct: 3 IVSAEFVKSVVDLQRCPAGGRPEVALAGRSNVGKSSLLNCLVNRRNLARTSNTPGRTRTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + IN+ +YLVDLPGYGYA P ++R W + Y R L V ++D P
Sbjct: 63 NFYLINNRFYLVDLPGYGYARVPEKMRASWGPLIEGYLSRRPELRGVIQIVDLRHPPTAQ 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTA-PPWIMT 283
D++ WL + +P +V TK DK K + L + Q T P I
Sbjct: 123 DVQLYQWLKHHHLPAVVVATKADKLSK--------SQGLRQLLVVRQTLGLTGDDPLIKF 174
Query: 284 SSVTNQGRDEI 294
S+ T +GRDE+
Sbjct: 175 SARTREGRDEL 185
>gi|262066526|ref|ZP_06026138.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
periodonticum ATCC 33693]
gi|291379760|gb|EFE87278.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
periodonticum ATCC 33693]
Length = 194
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 119/202 (58%), Gaps = 12/202 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPS--DGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
++ +A+F+KS+V +D P D + EFA VGRSNVGKSSL+NSL R KLA TSKTPG+T
Sbjct: 2 KIKKADFIKSAVYEKDYPEQLDKM-EFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRT 60
Query: 162 QCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
Q IN+F IND +Y+VDLPGYG+A P+E++ W + + Y ++ + VF+L+D
Sbjct: 61 QLINYFLINDEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKL-VFVLLDIRRVP 119
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+E WL N++ ++FTK DK + + E FF
Sbjct: 120 SDEDIEMLEWLEYNEMDYKIIFTKIDKLSNNERAKQLKAIKTRLIFEKEDVFFH------ 173
Query: 282 MTSSVTNQGRDEILLHMAQLRN 303
SS+TN+GRDEIL M + N
Sbjct: 174 --SSLTNKGRDEILTFMEEKLN 193
>gi|359497226|ref|XP_002264972.2| PREDICTED: GTP-binding protein At2g22870, partial [Vitis vinifera]
Length = 213
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/116 (63%), Positives = 88/116 (75%), Gaps = 7/116 (6%)
Query: 69 LFVPP--ETEVSIDDSSLSTRILKGSNIVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLP 126
LFVPP + E DD +L GSNIVL YA AQ+ + EFVKSS R +DCP D P
Sbjct: 83 LFVPPGVDPEEVTDD-----MVLPGSNIVLGPYAGHAQIKEVEFVKSSSRPKDCPKDDRP 137
Query: 127 EFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYG 182
EFA++GRSNVGKSSL+N+LVR+K++ALTSK PGKTQ INHF +N SWY+VDLPGYG
Sbjct: 138 EFAILGRSNVGKSSLINALVRKKEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYG 193
>gi|258516483|ref|YP_003192705.1| small GTP-binding protein [Desulfotomaculum acetoxidans DSM 771]
gi|257780188|gb|ACV64082.1| small GTP-binding protein [Desulfotomaculum acetoxidans DSM 771]
Length = 201
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 109/195 (55%), Gaps = 13/195 (6%)
Query: 104 QVAQAEFVKSSVRTEDCP-SDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
+V AEFV SS + CP PE GRSNVGKSSL+N LV RK LA TSKTPG+TQ
Sbjct: 2 KVTSAEFVISSPGIKLCPEGQEYPEIGFAGRSNVGKSSLINKLVNRKNLARTSKTPGRTQ 61
Query: 163 CINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAK 222
+N+F IN ++Y+VD PGYGYA P+ +R W K + Y NR L V LL+D
Sbjct: 62 LLNYFLINRAFYIVDFPGYGYAKVPQSVRAGWGKMIEGYLKNRKELSGVVLLLDIRHKPT 121
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPW 280
D++ WL +IP LV TK DK R ++ K L QE I
Sbjct: 122 AQDVQMFDWLQHYEIPTLLVATKADKLSRSQQIKQEKVIRTALGREQEKI---------- 171
Query: 281 IMTSSVTNQGRDEIL 295
++ SS+T QG+DE+L
Sbjct: 172 LLFSSLTGQGKDELL 186
>gi|333370331|ref|ZP_08462342.1| ribosome biogenesis GTP-binding protein YsxC [Desmospora sp. 8437]
gi|332978063|gb|EGK14801.1| ribosome biogenesis GTP-binding protein YsxC [Desmospora sp. 8437]
Length = 200
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 116/201 (57%), Gaps = 10/201 (4%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V ++EFV S+V P+D LPE AL GRSNVGKSSL+N L+ RK LA TS PGKTQ
Sbjct: 2 KVTESEFVISAVGPAQYPADALPEIALAGRSNVGKSSLINRLIHRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN +RIN + + D+PGYG+A P+ ++ W + + Y NR L V +ID P
Sbjct: 62 INFYRINGALFFADMPGYGFAKVPKSVKAAWGRMIEGYLSNRDELRGVIQVIDVRHPPTR 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D+ WL ++P +V TK DK + R +++L +E ++ + P I+
Sbjct: 122 DDVAMYEWLKHYRMPTMIVATKADKIPR-----GRWQKHLKQVREGLR--LEAGVPLILF 174
Query: 284 SSVTNQGRDEILLHMAQLRNY 304
S+ T QG++E+ A++R +
Sbjct: 175 SAQTGQGKEEVW---AEIRKW 192
>gi|334339590|ref|YP_004544570.1| ribosome biogenesis GTP-binding protein YsxC [Desulfotomaculum
ruminis DSM 2154]
gi|334090944|gb|AEG59284.1| ribosome biogenesis GTP-binding protein YsxC [Desulfotomaculum
ruminis DSM 2154]
Length = 201
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 113/199 (56%), Gaps = 11/199 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +EF+ S+V P LPE A VGRSNVGKSSL+N ++ RK LA TSKTPG+TQ
Sbjct: 2 KIQSSEFITSAVNPGGYPPGDLPEVAFVGRSNVGKSSLINKMLNRKGLARTSKTPGRTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN FR+N+++ +VDLPGYGYA P E+R W K + Y NR+ L VFLL+D
Sbjct: 62 INFFRVNENFMMVDLPGYGYAKVPEEVRVRWGKMVEGYLKNRANLQGVFLLLDCRHVPTA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D + WL +P +V TK DK + + Q +I+ +P +
Sbjct: 122 QDKQMYQWLAHYGVPAVVVATKIDKLSNNQWAKQ---------QGVIKRTLPLSPEHRLV 172
Query: 284 --SSVTNQGRDEILLHMAQ 300
S+ T +GR+E+L +AQ
Sbjct: 173 PFSAETGRGREELLEVIAQ 191
>gi|340751564|ref|ZP_08688374.1| GTP-binding protein engB [Fusobacterium mortiferum ATCC 9817]
gi|229420529|gb|EEO35576.1| GTP-binding protein engB [Fusobacterium mortiferum ATCC 9817]
Length = 201
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/147 (51%), Positives = 103/147 (70%), Gaps = 4/147 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSD-GLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
++ QAEFVKS+V +D P + EFA VGRSNVGKSSL+NS+ RKKLA TSKTPG+TQ
Sbjct: 2 KIKQAEFVKSAVYEKDYPMELKNIEFAFVGRSNVGKSSLINSITGRKKLAKTSKTPGRTQ 61
Query: 163 CINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLN-RSTLVSVFLLIDASIPA 221
IN+F++N+ +Y+VDLPGYG+A P+E++ +W K + Y + R LV V L I IP+
Sbjct: 62 LINYFKVNNEFYIVDLPGYGFAKVPKEMKAEWGKTMERYVASARKKLVFVLLDI-RRIPS 120
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDK 248
+ D+E WL + IP ++FTK DK
Sbjct: 121 EE-DMEMLVWLDHHDIPFKIIFTKMDK 146
>gi|147677143|ref|YP_001211358.1| ribosome biogenesis GTP-binding protein YsxC [Pelotomaculum
thermopropionicum SI]
gi|189037182|sp|A5D451.1|ENGB_PELTS RecName: Full=Probable GTP-binding protein EngB
gi|146273240|dbj|BAF58989.1| predicted GTPase [Pelotomaculum thermopropionicum SI]
Length = 198
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 109/192 (56%), Gaps = 7/192 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEF+ S+ +T D P+ +PE AL GRSNVGKSSLLN LV RK LA S TPG+T+
Sbjct: 2 KIKNAEFITSAAKTADYPAGNIPEVALAGRSNVGKSSLLNRLVNRKSLARISSTPGRTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F +N + LVDLPGYGYA R W + ++Y R L V LL+D+ P
Sbjct: 62 INFFLVNGLFRLVDLPGYGYAKVSARERQGWRRMVEEYLKTRENLKGVVLLVDSRHPPTV 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
+D++ WL IP + TK DK + K ++L +E++ P +
Sbjct: 122 LDVQMYEWLKYQGIPAAVAATKADKISRSKRA-----QSLKVIREVLN--LTAKEPLVFF 174
Query: 284 SSVTNQGRDEIL 295
S+ T++GR+E+L
Sbjct: 175 SAETSEGREEML 186
>gi|296328557|ref|ZP_06871076.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|296154366|gb|EFG95165.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
Length = 194
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 117/202 (57%), Gaps = 12/202 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPS--DGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
++ +A+FVKS+V +D P D + EFA VGRSNVGKSSL+NSL R KLA TSKTPG+T
Sbjct: 2 KIKKADFVKSAVYEKDYPEQLDKM-EFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRT 60
Query: 162 QCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
Q IN+F IND +Y+VDLPGYG+A P+E++ W + + Y ++ + VF+L+D
Sbjct: 61 QLINYFLINDEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKL-VFVLLDIRRVP 119
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+E WL N++ ++FTK DK E + +
Sbjct: 120 SDEDIEMLEWLEYNEMDYKIIFTKIDKLSN--------NERAKQLKAIKTRLIFDNEDVF 171
Query: 282 MTSSVTNQGRDEILLHMAQLRN 303
SS+TN+GRDEIL M + N
Sbjct: 172 FHSSLTNKGRDEILNFMEEKLN 193
>gi|237742955|ref|ZP_04573436.1| GTP-binding protein [Fusobacterium sp. 4_1_13]
gi|421144654|ref|ZP_15604563.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum subsp. fusiforme ATCC 51190]
gi|229430603|gb|EEO40815.1| GTP-binding protein [Fusobacterium sp. 4_1_13]
gi|395488961|gb|EJG09807.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum subsp. fusiforme ATCC 51190]
Length = 194
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 117/202 (57%), Gaps = 11/202 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSD-GLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
++ +A+FVKS+V +D P EFA VGRSNVGKSSL+NSL R KLA TSKTPG+TQ
Sbjct: 2 KIKKADFVKSAVYEKDYPEQLDKIEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61
Query: 163 CINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAK 222
IN+F IND +Y+VDLPGYG+A P+E++ W + + Y ++ + VF+L+D
Sbjct: 62 LINYFLINDEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKL-VFVLLDIRRVPS 120
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D+E WL N++ ++FTK DK E + +
Sbjct: 121 DEDIEMLEWLEYNEMDYKIIFTKIDKLSN--------NERAKQLKAIKTRLVFDNEDVFF 172
Query: 283 TSSVTNQGRDEILLHM-AQLRN 303
SS+TN+GRDEIL M A+L N
Sbjct: 173 HSSLTNKGRDEILDFMEAKLNN 194
>gi|19705309|ref|NP_602804.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|254302269|ref|ZP_04969627.1| GTP-binding protein [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|24418375|sp|Q8RHK1.1|ENGB_FUSNN RecName: Full=Probable GTP-binding protein EngB
gi|19713278|gb|AAL94103.1| GTP-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|148322461|gb|EDK87711.1| GTP-binding protein [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 194
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 117/202 (57%), Gaps = 12/202 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPS--DGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
++ +A+FVKS+V +D P D + EFA VGRSNVGKSSL+NSL R KLA TSKTPG+T
Sbjct: 2 KIKKADFVKSAVYEKDYPEQLDKM-EFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRT 60
Query: 162 QCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
Q IN+F IND +Y+VDLPGYG+A P+E++ W + + Y ++ + VF+L+D
Sbjct: 61 QLINYFLINDEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKL-VFVLLDIRRVP 119
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+E WL N++ ++FTK DK E + +
Sbjct: 120 SDEDIEMLEWLEYNEMDYKIIFTKIDKLSN--------NERAKQLKAIKTRLVFDNEDVF 171
Query: 282 MTSSVTNQGRDEILLHMAQLRN 303
SS+TN+GRDEIL M + N
Sbjct: 172 FHSSLTNKGRDEILNFMEEKLN 193
>gi|294053817|ref|YP_003547475.1| ribosome biogenesis GTP-binding protein YsxC [Coraliomargarita
akajimensis DSM 45221]
gi|293613150|gb|ADE53305.1| ribosome biogenesis GTP-binding protein YsxC [Coraliomargarita
akajimensis DSM 45221]
Length = 216
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 95/150 (63%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A F S+ EDCP LPEFA VGRSNVGKSSL+N L +K LA+TS PGKTQ
Sbjct: 2 KIETAVFRASAGALEDCPPSSLPEFAFVGRSNVGKSSLINMLTGKKGLAMTSSKPGKTQR 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F+INDSW+LVDLPGYGYA + + D++ Y R L +FLL+D+ + +
Sbjct: 62 INIFKINDSWHLVDLPGYGYAKLSKSKQHDFNVHVSAYLNERENLKQIFLLVDSQLEPQG 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
DL +A WL ++P +++ TK D+ K
Sbjct: 122 GDLAFAEWLEHCKLPYSVILTKTDRSSDSK 151
>gi|422340208|ref|ZP_16421162.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum subsp. polymorphum F0401]
gi|355370148|gb|EHG17536.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum subsp. polymorphum F0401]
Length = 194
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 117/202 (57%), Gaps = 12/202 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPS--DGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
++ +A+FVKS+V +D P D + EFA VGRSNVGKSSL+NSL R KLA TSKTPG+T
Sbjct: 2 KIRKADFVKSAVYEKDYPEQLDKM-EFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRT 60
Query: 162 QCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
Q IN+F IND +Y+VDLPGYG+A P+E++ W + + Y ++ + VF+L+D
Sbjct: 61 QLINYFLINDEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKL-VFVLLDIRRVP 119
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+E WL N++ ++FTK DK E + +
Sbjct: 120 SDEDIEMLEWLEYNEMDYKIIFTKIDKLSN--------NERAKQLKAIKTRLVFDNEDVF 171
Query: 282 MTSSVTNQGRDEILLHMAQLRN 303
SS+TN+GRDEIL M + N
Sbjct: 172 FHSSLTNKGRDEILNFMEEKLN 193
>gi|374997637|ref|YP_004973136.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfosporosinus orientis DSM 765]
gi|357216003|gb|AET70621.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfosporosinus orientis DSM 765]
Length = 199
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 90/144 (62%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V +AE+ S+V+ E P+DGLPE A+ GRSNVGKSSL+NS + R+ LA T TPGKTQ +
Sbjct: 4 VKKAEYTASAVKYEQYPTDGLPEIAMAGRSNVGKSSLINSFLGRRNLARTGNTPGKTQTL 63
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N +R+ND+W+LVDLPGYGYA + + W ++Y R L +V ++D
Sbjct: 64 NFYRVNDAWFLVDLPGYGYAKVAKTVNAQWGPMMENYLKKREQLRAVIQIVDIRHAPSVE 123
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK 248
D E WL Q+P +V TK DK
Sbjct: 124 DREMHEWLRVKQVPTMVVATKADK 147
>gi|333922906|ref|YP_004496486.1| GTP-binding protein engB [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333748467|gb|AEF93574.1| GTP-binding protein engB [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 197
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 115/205 (56%), Gaps = 15/205 (7%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+V P + LPE A VGRSNVGKSSL+N LV R+ LA TS TPG+TQ
Sbjct: 2 KIVTAEFVTSAVNPGGYPPEDLPEVAFVGRSNVGKSSLINKLVNRRGLAKTSSTPGRTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F++N+ + LVDLPGYG+A P +R W + + Y NR +L VF L+D
Sbjct: 62 INFFKVNNRFLLVDLPGYGFAKVPETVRAKWGQMIEGYLKNRESLKGVFQLVDCRHTPTV 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D + WL Q+P +V TK DK + + Q +I+ AP ++
Sbjct: 122 QDRQMYEWLLHYQVPTVVVATKVDKLSNNQWAKQ---------QAVIKKTLSLAPEHLLI 172
Query: 284 --SSVTNQGRDEILLHMAQLRNYWL 306
S+ T +GRDE+L Q+ ++W+
Sbjct: 173 AFSAETGRGRDELL----QVISHWV 193
>gi|421527263|ref|ZP_15973867.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum ChDC F128]
gi|402256697|gb|EJU07175.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum ChDC F128]
Length = 194
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 117/202 (57%), Gaps = 12/202 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPS--DGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
++ +A+FVKS++ +D P D + EFA VGRSNVGKSSL+NSL R KLA TSKTPG+T
Sbjct: 2 KIKKADFVKSAIYEKDYPEQLDKM-EFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRT 60
Query: 162 QCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
Q IN+F IND +Y+VDLPGYG+A P+E++ W + + Y ++ + VF+L+D
Sbjct: 61 QLINYFLINDEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKL-VFVLLDIRRVP 119
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+E WL N++ ++FTK DK E + +
Sbjct: 120 SDEDIEMLEWLEYNEMDYKIIFTKIDKLSN--------NERAKQLKAIKTRLVFDNEDVF 171
Query: 282 MTSSVTNQGRDEILLHMAQLRN 303
SS+TN+GRDEIL M + N
Sbjct: 172 FHSSLTNKGRDEILNFMEEKLN 193
>gi|281412764|ref|YP_003346843.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga
naphthophila RKU-10]
gi|281373867|gb|ADA67429.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga
naphthophila RKU-10]
Length = 195
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 109/191 (57%), Gaps = 8/191 (4%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ E VK + D P E A VGRSNVGKSSLLN+L KK+A SKTPGKT+ I
Sbjct: 3 IQDVELVKVARTPGDYPPPLKGEVAFVGRSNVGKSSLLNALFN-KKIAFVSKTPGKTRSI 61
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + +N +Y VDLPGYGYA ++ R W + +DYF NR +L VFLL+D IP +
Sbjct: 62 NFYLVNSKYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDS 121
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DL W+ IP T+V TK DK K + K+ EE+ +F G + P TS
Sbjct: 122 DLMMVEWMKSLNIPFTIVLTKMDKVKMSER-AKKLEEHQKEFSRY--GEYTIIP----TS 174
Query: 285 SVTNQGRDEIL 295
SVT +G E+L
Sbjct: 175 SVTGEGISELL 185
>gi|414153437|ref|ZP_11409763.1| putative GTP-binding protein EngB [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411455116|emb|CCO07666.1| putative GTP-binding protein EngB [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 204
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 108/194 (55%), Gaps = 11/194 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEF+ S+V P LPE A VGRSNVGKSSL+N LV RK LA TS TPG+TQ
Sbjct: 2 KIVAAEFLTSAVNPGGYPPGDLPEIAFVGRSNVGKSSLINRLVNRKGLARTSSTPGRTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F+IND + +VDLPGYGYA P E++ W K + Y NR L V LL+D
Sbjct: 62 INFFKINDRFIMVDLPGYGYARVPEEVKARWGKMIEGYLKNRENLRGVCLLLDCRHTPTA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP--PWI 281
D++ WL ++P +V TK DK + + Q +I+ AP I
Sbjct: 122 QDIQMYRWLQYYRLPAAVVATKADKLSNNQWAKQ---------QSVIKKTLSLAPEHSLI 172
Query: 282 MTSSVTNQGRDEIL 295
S+ T +GRDE+L
Sbjct: 173 AFSAETGRGRDELL 186
>gi|323703639|ref|ZP_08115282.1| ribosome biogenesis GTP-binding protein YsxC [Desulfotomaculum
nigrificans DSM 574]
gi|323531411|gb|EGB21307.1| ribosome biogenesis GTP-binding protein YsxC [Desulfotomaculum
nigrificans DSM 574]
Length = 197
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 115/205 (56%), Gaps = 15/205 (7%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+V P + LPE A VGRSNVGKSSL+N LV R+ LA TS TPG+TQ
Sbjct: 2 KIVTAEFVTSAVNPGGYPPEDLPEVAFVGRSNVGKSSLINKLVNRRGLAKTSSTPGRTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F++N+ + LVDLPGYG+A P +R W + + Y NR +L VF L+D
Sbjct: 62 INFFKVNNRFLLVDLPGYGFAKVPETVRAKWGQMIEGYLKNRESLKGVFQLVDCRHTPTV 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D + WL Q+P +V TK DK + + Q +I+ AP ++
Sbjct: 122 QDRQMYEWLLHYQVPTVVVATKVDKLSNNQWAKQ---------QAVIKKTLSLAPEHLLI 172
Query: 284 --SSVTNQGRDEILLHMAQLRNYWL 306
S+ T +GRDE+L Q+ ++W+
Sbjct: 173 AFSAETGRGRDELL----QVISHWV 193
>gi|222100001|ref|YP_002534569.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga
neapolitana DSM 4359]
gi|254783217|sp|B9K8C0.1|ENGB_THENN RecName: Full=Probable GTP-binding protein EngB
gi|221572392|gb|ACM23204.1| GTP-binding protein engB [Thermotoga neapolitana DSM 4359]
Length = 195
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 108/185 (58%), Gaps = 12/185 (6%)
Query: 115 VRTEDCPSDGLP----EFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRIN 170
V+ P D P E A VGRSNVGKSSLLN+L RK +A SKTPGKT+ IN + +N
Sbjct: 9 VKVAKTPGDYPPPLKGEVAFVGRSNVGKSSLLNALFNRK-IAYVSKTPGKTRSINFYLVN 67
Query: 171 DSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYAS 230
+Y VDLPGYGYA ++ R W K +DYF NR +L VFLL+D IP + DL
Sbjct: 68 SRYYFVDLPGYGYAKVSKKERVQWKKLVEDYFTNRWSLQMVFLLVDGRIPPQETDLMMVE 127
Query: 231 WLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQG 290
WL +P T+V TK DK K + K+ +E+ F + G + P TSSVT +G
Sbjct: 128 WLKSLNVPFTIVLTKMDKVKMSER-KKKLDEHKKAFSKY--GEYTIIP----TSSVTGEG 180
Query: 291 RDEIL 295
D++L
Sbjct: 181 IDDLL 185
>gi|379723753|ref|YP_005315884.1| protein EngB [Paenibacillus mucilaginosus 3016]
gi|378572425|gb|AFC32735.1| EngB [Paenibacillus mucilaginosus 3016]
Length = 225
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 108/191 (56%), Gaps = 7/191 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V QAEFV S+V P+D LPE AL GRSNVGKSSL+N +++RK LA TS PGKTQ
Sbjct: 2 KVNQAEFVISAVGPSQYPADALPEIALAGRSNVGKSSLINRMIQRKNLARTSSKPGKTQQ 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N++RIN + VDLPGYGYA + R W KF + Y R L V +ID P
Sbjct: 62 LNYYRINQDLFFVDLPGYGYAQVSKTEREKWGKFIEQYLTEREPLKLVLQVIDVRHPPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D +WL N +P+ +V TK DK + K +++L +E + P I+
Sbjct: 122 DDQAMYAWLKHNGVPLCIVVTKADKIPRGKW-----QQHLKIVRETLGA--DKDDPMILF 174
Query: 284 SSVTNQGRDEI 294
SS G+DE+
Sbjct: 175 SSELGIGKDEL 185
>gi|375009747|ref|YP_004983380.1| GTP-binding protein engB [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288596|gb|AEV20280.1| GTP-binding protein engB [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 195
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 105/191 (54%), Gaps = 11/191 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V +AE V S+V+ E P G PE AL GRSNVGKSS +N ++ RK LA TS PGKTQ +
Sbjct: 3 VKKAELVTSAVKPEQYPDGGRPEVALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + INDS+Y VD+PGYG+A ++ R W K + YF R L + LL+D P
Sbjct: 63 NFYLINDSFYFVDVPGYGFARVSKQERQKWGKMMETYFTTREVLKAAVLLVDLRHPPTKD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D+ +L +IP+ ++ TK DK R K + K E L P I+
Sbjct: 123 DVMMYEFLKHYEIPVIVIATKADKVPRGKHQKHAKIARETLR---------MADGDPLIL 173
Query: 283 TSSVTNQGRDE 293
S+ T QG+DE
Sbjct: 174 FSAETGQGKDE 184
>gi|337750705|ref|YP_004644867.1| protein EngB [Paenibacillus mucilaginosus KNP414]
gi|336301894|gb|AEI44997.1| EngB [Paenibacillus mucilaginosus KNP414]
Length = 225
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 108/191 (56%), Gaps = 7/191 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V QAEFV S+V P+D LPE AL GRSNVGKSSL+N +++RK LA TS PGKTQ
Sbjct: 2 KVNQAEFVISAVGPSQYPADALPEIALAGRSNVGKSSLINRMIQRKNLARTSSKPGKTQQ 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N++RIN + VDLPGYGYA + R W KF + Y R L V +ID P
Sbjct: 62 LNYYRINQDLFFVDLPGYGYAQVSKTEREKWGKFIEQYLTEREPLKLVLQVIDVRHPPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D +WL N +P+ +V TK DK + K +++L +E + P I+
Sbjct: 122 DDQAMYAWLKHNGVPLCIVVTKADKIPRGKW-----QQHLKIVRETLGA--DKDDPMILF 174
Query: 284 SSVTNQGRDEI 294
SS G+DE+
Sbjct: 175 SSELGIGKDEL 185
>gi|253575676|ref|ZP_04853012.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251845014|gb|EES73026.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 214
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 113/201 (56%), Gaps = 10/201 (4%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +AEF+ S+V P D LPE AL GRSNVGKSSL+N ++ RK LA TS TPGKTQ
Sbjct: 2 KVTKAEFIISAVGPNQYPEDALPEIALAGRSNVGKSSLINRMINRKNLARTSSTPGKTQH 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N++R+ND Y VD+PGYGYA + R W K + Y R TL V +ID P
Sbjct: 62 LNYYRVNDRLYFVDVPGYGYAKVSKSQREVWGKMIEKYLQERETLKLVLQIIDLRHPPTK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D WL ++P+ +V TK DK K R +++L +E + + P I+
Sbjct: 122 DDELMYDWLKAYELPVCVVATKADKVPK-----SRWQKHLKIIKEAL--VLRAGDPLILF 174
Query: 284 SSVTNQGRDEILLHMAQLRNY 304
S+ G+DE+ AQ++ Y
Sbjct: 175 SAEEGIGKDEL---WAQIKRY 192
>gi|34762743|ref|ZP_00143732.1| GTP-binding protein [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|27887593|gb|EAA24673.1| GTP-binding protein [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
Length = 194
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 116/202 (57%), Gaps = 12/202 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPS--DGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
++ +A+FVKS+V +D P D + EFA VGRSNVGKSSL+NSL R KLA TSKTPG+T
Sbjct: 2 KIKKADFVKSAVYEKDYPEQLDKM-EFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRT 60
Query: 162 QCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
Q IN+F IND +Y+VDLPGYG+A P+E++ W + + Y ++ + VF+L+D
Sbjct: 61 QLINYFLINDEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKL-VFVLLDIRRVP 119
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+E WL N + ++FTK DK E + +
Sbjct: 120 SDEDIEMLEWLEYNDMDYKIIFTKIDKLSN--------NERAKQLKAIKTRLVFDNEDVF 171
Query: 282 MTSSVTNQGRDEILLHMAQLRN 303
SS+TN+GRDEIL M + N
Sbjct: 172 FHSSLTNKGRDEILNFMEEKLN 193
>gi|386726505|ref|YP_006192831.1| GTP-binding protein YsxC [Paenibacillus mucilaginosus K02]
gi|384093630|gb|AFH65066.1| GTP-binding protein YsxC [Paenibacillus mucilaginosus K02]
Length = 225
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 108/191 (56%), Gaps = 7/191 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V QAEFV S+V P+D LPE AL GRSNVGKSSL+N +++RK LA TS PGKTQ
Sbjct: 2 KVNQAEFVISAVGPSQYPADALPEIALAGRSNVGKSSLINRMIQRKNLARTSSKPGKTQQ 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N++RIN + VDLPGYGYA + R W KF + Y R L V +ID P
Sbjct: 62 LNYYRINQDLFFVDLPGYGYAQVSKTEREKWGKFIEQYLTEREPLKLVLQVIDVRHPPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D +WL N +P+ +V TK DK + K +++L +E + P I+
Sbjct: 122 DDQAMYAWLKHNGVPLCIVVTKADKIPRGKW-----QQHLKIVRETLGA--DKDDPMILF 174
Query: 284 SSVTNQGRDEI 294
SS G+DE+
Sbjct: 175 SSELGIGKDEL 185
>gi|392427520|ref|YP_006468514.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfosporosinus acidiphilus SJ4]
gi|391357483|gb|AFM43182.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfosporosinus acidiphilus SJ4]
Length = 196
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 89/144 (61%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +AE+V S+V+ E P LPE A+ GRSNVGKSSL+N + RK LA T TPGKTQ +
Sbjct: 4 IRKAEYVASAVKYEQYPVGDLPEIAMAGRSNVGKSSLINRFLSRKNLARTGNTPGKTQTL 63
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N +R+ND+W+LVDLPGYGYA + + W + YF R +L +V ++D
Sbjct: 64 NFYRVNDAWFLVDLPGYGYAKVAKSVNAQWGGMMETYFKKRESLRAVIQIVDIRHAPSRE 123
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK 248
D+E WL QIP +V TK DK
Sbjct: 124 DVEMQQWLRMRQIPTMVVATKADK 147
>gi|256846927|ref|ZP_05552381.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp.
3_1_36A2]
gi|294784268|ref|ZP_06749563.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp.
3_1_27]
gi|256717725|gb|EEU31284.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp.
3_1_36A2]
gi|294488134|gb|EFG35485.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp.
3_1_27]
Length = 194
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 114/201 (56%), Gaps = 10/201 (4%)
Query: 104 QVAQAEFVKSSVRTEDCPSD-GLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
++ +A+FVKS+V +D P EFA VGRSNVGKSSL+NSL R KLA TSKTPG+TQ
Sbjct: 2 KIKKADFVKSAVYEKDYPEQLDKIEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61
Query: 163 CINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAK 222
IN+F IND +Y+VDLPGYG+A P+E++ W + + Y ++ + VF+L+D
Sbjct: 62 LINYFLINDEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKL-VFVLLDIRRVPS 120
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D+E WL N + ++FTK DK E + +
Sbjct: 121 DEDIEMLEWLEYNDMDYKIIFTKIDKLSN--------NERAKQLKAIKTRLVFDNEDVFF 172
Query: 283 TSSVTNQGRDEILLHMAQLRN 303
SS+TN+GRDEIL M + N
Sbjct: 173 HSSLTNKGRDEILNFMEEKLN 193
>gi|430750765|ref|YP_007213673.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Thermobacillus
composti KWC4]
gi|430734730|gb|AGA58675.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Thermobacillus
composti KWC4]
Length = 195
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 103/191 (53%), Gaps = 7/191 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ EFV +VR E P DGLPE AL GRSNVGKSSL+N ++ RK LA TS PGKTQ
Sbjct: 2 KIVSTEFVIGAVRHEQLPEDGLPEIALAGRSNVGKSSLINRMIERKNLARTSSQPGKTQQ 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +R+N S Y VD PGYGYA + R W +F + Y R L L++D P
Sbjct: 62 LNFYRVNGSLYFVDFPGYGYAKVSKAQRAKWGRFIESYIRERKQLKLQLLIVDLRHPPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D WL IP +V TK DK + R E +L +E + P +M
Sbjct: 122 DDRLMYDWLRHFGIPTCVVATKADKVPR-----TRRERHLRVVRETLG--MTPDVPLVMF 174
Query: 284 SSVTNQGRDEI 294
SS T +GR+E+
Sbjct: 175 SSETGEGREEL 185
>gi|262340870|ref|YP_003283725.1| GTP-binding protein [Blattabacterium sp. (Blattella germanica) str.
Bge]
gi|262272207|gb|ACY40115.1| GTP-binding protein [Blattabacterium sp. (Blattella germanica) str.
Bge]
Length = 208
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 113/194 (58%), Gaps = 6/194 (3%)
Query: 112 KSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRIND 171
K S +T + PE+A VGRSNVGKSSL+N + RKK+A S PG+TQ INHF IN+
Sbjct: 9 KGSSKTINVFIHNFPEYAFVGRSNVGKSSLINWITGRKKIAKVSSYPGRTQYINHFLINN 68
Query: 172 SWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASW 231
WYL+DLPGYG+ A ++++ K DY +R LV +FLLID+ + IDL++
Sbjct: 69 QWYLIDLPGYGF-FAEKKIKEKAQKLISDYIFHRKNLVGLFLLIDSRFLIQQIDLDFIQK 127
Query: 232 LGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGR 291
L ++ +VFTK DK K E+N++ E I+ T P W S+ GR
Sbjct: 128 LNNKKMDFCIVFTKTDKL-----NYKLIEKNISFCIEKIENNGFTMPVWFKVSAKKKDGR 182
Query: 292 DEILLHMAQLRNYW 305
+ I+ ++ +L +++
Sbjct: 183 NNIIQYIKKLNDFY 196
>gi|15644215|ref|NP_229266.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga maritima
MSB8]
gi|418045523|ref|ZP_12683618.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga maritima
MSB8]
gi|13124246|sp|Q9X1H7.1|ENGB_THEMA RecName: Full=Probable GTP-binding protein EngB
gi|335892384|pdb|3PQC|A Chain A, Crystal Structure Of Thermotoga Maritima Ribosome
Biogenesis Gtp- Binding Protein Engb (YsxcYIHA) IN
COMPLEX WITH GDP
gi|335892385|pdb|3PQC|B Chain B, Crystal Structure Of Thermotoga Maritima Ribosome
Biogenesis Gtp- Binding Protein Engb (YsxcYIHA) IN
COMPLEX WITH GDP
gi|335892386|pdb|3PR1|A Chain A, Crystal Structure Of Apo Thermotoga Maritima Ribosome
Biogenesis Gtp- Binding Protein Engb
gi|4982031|gb|AAD36534.1|AE001797_14 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351676408|gb|EHA59561.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga maritima
MSB8]
Length = 195
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 109/191 (57%), Gaps = 8/191 (4%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ E VK + D P E A VGRSNVGKSSLLN+L RK +A SKTPGKT+ I
Sbjct: 3 IRDVELVKVARTPGDYPPPLKGEVAFVGRSNVGKSSLLNALFNRK-IAFVSKTPGKTRSI 61
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + +N +Y VDLPGYGYA ++ R W + +DYF NR +L VFLL+D IP +
Sbjct: 62 NFYLVNSKYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDS 121
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DL W+ IP T+V TK DK K + K+ EE+ F + G + P TS
Sbjct: 122 DLMMVEWMKSLNIPFTIVLTKMDKVKMSER-AKKLEEHRKVFSK--YGEYTIIP----TS 174
Query: 285 SVTNQGRDEIL 295
SVT +G E+L
Sbjct: 175 SVTGEGISELL 185
>gi|116751466|ref|YP_848153.1| HSR1-related GTP-binding protein [Syntrophobacter fumaroxidans
MPOB]
gi|116700530|gb|ABK19718.1| GTP-binding protein, HSR1-related [Syntrophobacter fumaroxidans
MPOB]
Length = 198
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 109/197 (55%), Gaps = 12/197 (6%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ AEF ++VR+ P D LPE A GRSNVGKSSL+N L++R+KL TS+TPG+TQ I
Sbjct: 7 IKSAEFKTAAVRSGQYPDDHLPEVAFAGRSNVGKSSLINCLLQRRKLVRTSRTPGQTQTI 66
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F IN +Y VDLPGYG+A P +R W + Y R L V ++DA P P
Sbjct: 67 NFFLINGLFYCVDLPGYGFARVPMAVRAQWGPMVESYLGGRPNLRGVVQILDARHPPSPD 126
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
DL+ +WL +IP V TK DK R K R +L ++ + ++
Sbjct: 127 DLKLWNWLIDRKIPAVPVLTKADKVPRTKWDAAASRASLSLGIPRDRL----------LL 176
Query: 283 TSSVTNQGRDEILLHMA 299
SS T GRD +LL +A
Sbjct: 177 FSSETRHGRDALLLQVA 193
>gi|407796094|ref|ZP_11143050.1| GTP-binding protein YsxC [Salimicrobium sp. MJ3]
gi|407019448|gb|EKE32164.1| GTP-binding protein YsxC [Salimicrobium sp. MJ3]
Length = 195
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 114/192 (59%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +AE V S+V PSD +PE AL GRSNVGKSS +N++++RK LA TS PGKTQ
Sbjct: 2 RVNEAEIVISAVSKTQYPSDPIPEIALAGRSNVGKSSFINTMIQRKNLARTSGKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IN S++ VD+PGYGYA + RT W K +YF R LVS L++D
Sbjct: 62 LNFYIINKSFHFVDVPGYGYAKVSKAERTRWGKMMDEYFGEREQLVSAVLVVDLRHEPTD 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQT--APPWI 281
D + + +P+T++ TK DK KK GKRP + ++LI+ + P I
Sbjct: 122 EDCMMYDYFKYHDLPVTIIATKMDKVKK----GKRPAQ-----KKLIREVLEVDEKDPLI 172
Query: 282 MTSSVTNQGRDE 293
+ S+ T++G+DE
Sbjct: 173 LFSAETSEGKDE 184
>gi|357009626|ref|ZP_09074625.1| GTP-binding protein YsxC [Paenibacillus elgii B69]
Length = 216
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 111/191 (58%), Gaps = 7/191 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V QAEF+ S+V P+D LPE AL GRSNVGKSSL+N ++ RK LA TS PGKTQ
Sbjct: 2 KVNQAEFIISAVGPSQYPTDALPEIALAGRSNVGKSSLINRMISRKNLARTSSKPGKTQQ 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N+++IN + VDLPGYGYA + R W KF ++Y L+R L V L+ID P
Sbjct: 62 LNYYKINSDLFFVDLPGYGYAQVSKTEREKWGKFIENYLLHREFLKLVLLVIDLRHPPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D SWL + P+ +V TK DK + K +++L +E + + P ++
Sbjct: 122 DDQAMYSWLKHHGTPLCIVTTKADKIPRSKW-----QQHLKIVKETLGA--DKSDPVVLF 174
Query: 284 SSVTNQGRDEI 294
SS G+DE+
Sbjct: 175 SSELGLGKDEL 185
>gi|451980845|ref|ZP_21929230.1| putative GTP-binding protein EngB [Nitrospina gracilis 3/211]
gi|451761967|emb|CCQ90471.1| putative GTP-binding protein EngB [Nitrospina gracilis 3/211]
Length = 203
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 109/202 (53%), Gaps = 13/202 (6%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +AEF+ +V + P+ LPE A +GRSNVGKSSL+NSLV RKKL TS TPGKTQ
Sbjct: 2 KIVKAEFITGAVSRKQFPNQPLPEIAFIGRSNVGKSSLINSLVNRKKLVKTSATPGKTQM 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F IND W L DLPGYG+A P +++ W +DY R L SV L++D
Sbjct: 62 INFFNINDVWMLADLPGYGFAKVPPQVQKKWQVLIEDYLQERERLESVVLIVDIRRKPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK---RKKKKNGGKRPEENLNDFQELIQGFFQTAPPW 280
+DL WL + +V TK DK ++K+ K +E D +
Sbjct: 122 LDLVMRDWLEDAGLDYVVVATKSDKLSQTERKQQMAKIKKEFGGDGVRTV---------- 171
Query: 281 IMTSSVTNQGRDEILLHMAQLR 302
+M SS N GR E+ H + R
Sbjct: 172 LMYSSKNNHGRKELWNHFSNRR 193
>gi|338811976|ref|ZP_08624175.1| ribosome biogenesis GTP-binding protein YsxC [Acetonema longum DSM
6540]
gi|337275945|gb|EGO64383.1| ribosome biogenesis GTP-binding protein YsxC [Acetonema longum DSM
6540]
Length = 214
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 118/214 (55%), Gaps = 21/214 (9%)
Query: 100 ARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPG 159
A+ V +AE++ S+VR E P PE A +GRSNVGKSSL+NS+ R + LALTS TPG
Sbjct: 7 AQKPDVIRAEYLISAVRQEQYPPGDEPEIAFIGRSNVGKSSLINSVCRHRGLALTSATPG 66
Query: 160 KTQCINHFRI------NDS-----WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTL 208
KTQ IN FR+ N+S + VDLPGYGYA R R W KF ++YFL S L
Sbjct: 67 KTQTINFFRVFFKLSHNNSEARRQIFFVDLPGYGYAKTGRSTRRQWAKFIEEYFLQSSRL 126
Query: 209 VSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQE 268
++ LID P D+ + WL + +P+ +V TK DK + + + +
Sbjct: 127 KRIYQLIDIRHPPMESDILFHQWLRRQGLPVKIVATKSDKITRSR---------MKEHMG 177
Query: 269 LIQGFFQTAPPWIMT-SSVTNQGRDEILLHMAQL 301
+I P I+ S+++ GRDE+L + Q+
Sbjct: 178 VIARTLGIEPEQILIHSALSGAGRDELLDDIVQI 211
>gi|289766536|ref|ZP_06525914.1| GTP-binding protein [Fusobacterium sp. D11]
gi|289718091|gb|EFD82103.1| GTP-binding protein [Fusobacterium sp. D11]
Length = 194
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 114/201 (56%), Gaps = 10/201 (4%)
Query: 104 QVAQAEFVKSSVRTEDCPSD-GLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
++ +A+F+KS+V +D P EFA VGRSNVGKSSL+NSL R KLA TSKTPG+TQ
Sbjct: 2 KIRKADFIKSAVYEKDYPEQLDKIEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61
Query: 163 CINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAK 222
IN+F IND +Y+VDLPGYG+A P+E++ W + + Y ++ + VF+L+D
Sbjct: 62 LINYFLINDEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKI-VFVLLDIRRVPS 120
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D+E WL N + ++FTK DK E + +
Sbjct: 121 DEDIEMLEWLEYNDMDYKIIFTKIDKLSN--------NERAKQLKAIKTRLVFDNEDVFF 172
Query: 283 TSSVTNQGRDEILLHMAQLRN 303
S++TN+GRDEIL M + N
Sbjct: 173 HSALTNKGRDEILDFMEEKLN 193
>gi|148270457|ref|YP_001244917.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga petrophila
RKU-1]
gi|166232160|sp|A5IMB8.1|ENGB_THEP1 RecName: Full=Probable GTP-binding protein EngB
gi|147736001|gb|ABQ47341.1| small GTP-binding protein [Thermotoga petrophila RKU-1]
Length = 195
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 108/191 (56%), Gaps = 8/191 (4%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ E VK + D P E A VGRSNVGKSSLLN+L KK+A SKTPGKT+ I
Sbjct: 3 IQDVELVKVARTPGDYPPPLKGEVAFVGRSNVGKSSLLNALFN-KKIAFVSKTPGKTRSI 61
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + +N +Y VDLPGYGYA ++ R W + +DYF NR +L VFLL+D IP +
Sbjct: 62 NFYLVNSKYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDS 121
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D W+ IP T+V TK DK K + K+ EE+ +F G + P TS
Sbjct: 122 DFMMIEWMKSLNIPFTIVLTKMDKVKMSER-AKKLEEHQKEFSRY--GEYTIIP----TS 174
Query: 285 SVTNQGRDEIL 295
SVT +G E+L
Sbjct: 175 SVTGEGISELL 185
>gi|404368995|ref|ZP_10974341.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
ulcerans ATCC 49185]
gi|313688287|gb|EFS25122.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
ulcerans ATCC 49185]
Length = 196
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 102/147 (69%), Gaps = 4/147 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSD-GLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
V QA+FVKS+V +D P EFA VGRSNVGKSSL+NS+ RKKLA TSKTPG+TQ
Sbjct: 2 NVKQADFVKSAVYEKDYPEQLNNMEFAFVGRSNVGKSSLINSITGRKKLAKTSKTPGRTQ 61
Query: 163 CINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDA-SIPA 221
IN+F+IN+ +++VDLPGYG+A P+E++ +W K T D ++ VF+L+D IP+
Sbjct: 62 LINYFKINNEFFIVDLPGYGFAKVPKEMKAEWGK-TMDRYIASPRKKLVFVLLDIRRIPS 120
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDK 248
+ D+E +L + IP ++FTK DK
Sbjct: 121 QE-DIEMLVYLDHHDIPFKIIFTKIDK 146
>gi|374583393|ref|ZP_09656487.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfosporosinus youngiae DSM 17734]
gi|374419475|gb|EHQ91910.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfosporosinus youngiae DSM 17734]
Length = 208
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 89/144 (61%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +AE+ S+V+ E P+DGLPE A+ GRSNVGKSSL+N + R+ LA T TPGKTQ +
Sbjct: 4 IKKAEYAASAVKYEQYPTDGLPEIAMAGRSNVGKSSLINRFLGRRNLARTGNTPGKTQTL 63
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N +R+ND+W+ VDLPGYGYA + + W ++Y R L +V ++D
Sbjct: 64 NFYRVNDAWFFVDLPGYGYAKVAKTVNAQWGPMMENYLKKREPLRAVIQIVDIRHAPSAE 123
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK 248
D+E WL Q+P +V TK DK
Sbjct: 124 DIEMQQWLRSMQVPTMVVATKVDK 147
>gi|402574572|ref|YP_006623915.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfosporosinus meridiei DSM 13257]
gi|402255769|gb|AFQ46044.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfosporosinus meridiei DSM 13257]
Length = 204
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 90/144 (62%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +AE+V S+V+ E P DGLPE A+ GRSNVGKSSL+NS + R+ LA T TPGKTQ +
Sbjct: 4 IKKAEYVASAVKYEQYPVDGLPEIAMAGRSNVGKSSLINSFLGRRNLARTGNTPGKTQTL 63
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N +R+ND+W+ VDLPGYGYA + + W ++Y R L +V ++D
Sbjct: 64 NFYRVNDAWFFVDLPGYGYAKVAKTVNAQWGPMMENYLKKREPLRAVIQIVDIRHAPSVE 123
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK 248
D+E WL ++P +V TK DK
Sbjct: 124 DVEMQQWLRTMEVPTMVVATKVDK 147
>gi|373496132|ref|ZP_09586680.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp.
12_1B]
gi|371966043|gb|EHO83535.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp.
12_1B]
Length = 196
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 102/147 (69%), Gaps = 4/147 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSD-GLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
V QA+FVKS+V +D P EFA VGRSNVGKSSL+NS+ RKKLA TSKTPG+TQ
Sbjct: 2 NVKQADFVKSAVYEKDYPEQLNNMEFAFVGRSNVGKSSLINSITGRKKLAKTSKTPGRTQ 61
Query: 163 CINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDA-SIPA 221
IN+F+IN+ +++VDLPGYG+A P+E++ +W K T D ++ VF+L+D IP+
Sbjct: 62 LINYFKINNEFFIVDLPGYGFAKVPKEMKAEWGK-TMDRYIASPRKKLVFVLLDIRRIPS 120
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDK 248
+ D+E +L + IP ++FTK DK
Sbjct: 121 QE-DIEMLVYLDHHDIPFKIIFTKMDK 146
>gi|56421184|ref|YP_148502.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus
kaustophilus HTA426]
gi|81819655|sp|Q5KWK2.1|ENGB_GEOKA RecName: Full=Probable GTP-binding protein EngB
gi|56381026|dbj|BAD76934.1| GTP-binding protein [Geobacillus kaustophilus HTA426]
Length = 195
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 104/191 (54%), Gaps = 11/191 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V +AE V S+V+ E P G PE AL GRSNVGKSS +N ++ RK LA TS PGKTQ +
Sbjct: 3 VKKAELVTSAVKPEQYPDGGRPEVALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + INDS+Y VD+PGYG+A ++ R W + YF R L + LL+D P
Sbjct: 63 NFYLINDSFYFVDVPGYGFARVSKQERQKWGNMMETYFTTREALKAAVLLVDLRHPPTKD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D+ +L +IP+ ++ TK DK R K + K E L P I+
Sbjct: 123 DVMMYEFLKHYEIPVIVIATKADKVPRGKHQKHAKIARETLR---------MADGDPLIL 173
Query: 283 TSSVTNQGRDE 293
S+ T QG+DE
Sbjct: 174 FSAETGQGKDE 184
>gi|261418335|ref|YP_003252017.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp.
Y412MC61]
gi|297529187|ref|YP_003670462.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp.
C56-T3]
gi|319767706|ref|YP_004133207.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp.
Y412MC52]
gi|448238931|ref|YP_007402989.1| ribosome biogenesis GTP-binding protein [Geobacillus sp. GHH01]
gi|261374792|gb|ACX77535.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp.
Y412MC61]
gi|297252439|gb|ADI25885.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp.
C56-T3]
gi|317112572|gb|ADU95064.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp.
Y412MC52]
gi|445207773|gb|AGE23238.1| ribosome biogenesis GTP-binding protein [Geobacillus sp. GHH01]
Length = 195
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 104/191 (54%), Gaps = 11/191 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V +AE V S+V+ E P G PE AL GRSNVGKSS +N ++ RK LA TS PGKTQ +
Sbjct: 3 VKKAELVTSAVKPEQYPDGGRPEVALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + INDS+Y VD+PGYG+A ++ R W + YF R L + LL+D P
Sbjct: 63 NFYLINDSFYFVDVPGYGFARVSKQERQKWGNMMETYFTTREVLKAAVLLVDLRHPPTKD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D+ +L +IP+ ++ TK DK R K + K E L P I+
Sbjct: 123 DVMMYEFLKHYEIPVIVIATKADKVPRGKHQKHAKIARETLR---------MADGDPLIL 173
Query: 283 TSSVTNQGRDE 293
S+ T QG+DE
Sbjct: 174 FSAETGQGKDE 184
>gi|261405364|ref|YP_003241605.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp.
Y412MC10]
gi|261281827|gb|ACX63798.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp.
Y412MC10]
Length = 214
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 110/191 (57%), Gaps = 7/191 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +AEFV S+V P D LPE AL GRSNVGKSSL+N ++ RK LA TS TPGKTQ
Sbjct: 2 KVTKAEFVISAVVPAQYPEDALPEIALAGRSNVGKSSLINRMISRKNLARTSATPGKTQQ 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N++R+ND YLVD PGYGYA + R + + + Y L+R L V L++D P
Sbjct: 62 LNYYRVNDDLYLVDFPGYGYAKVSKTQRAAFGEMIERYLLSREELKLVLLIVDMRHPPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D+ WL P+ +V TK DK K R ++++ +E + F+ ++M
Sbjct: 122 DDISMYEWLQHYNRPVCVVATKADKIPK-----TRRQKHVKIVKETLG--FKPYHSFVMF 174
Query: 284 SSVTNQGRDEI 294
SS G+DE+
Sbjct: 175 SSELGLGKDEL 185
>gi|422939794|ref|ZP_16967166.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
gi|339890663|gb|EGQ79756.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
Length = 194
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 115/201 (57%), Gaps = 10/201 (4%)
Query: 104 QVAQAEFVKSSVRTEDCPSD-GLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
++ +A+F+KS+V +D P + EFA VGRSNVGKSSL+NSL R KLA TSKTPG+TQ
Sbjct: 2 KIRKADFIKSAVYEKDYPEELDKIEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61
Query: 163 CINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAK 222
IN+F IN +Y+VDLPGYG+A P+E++ W + + Y ++ + VF+L+D
Sbjct: 62 LINYFLINGEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKL-VFVLLDIRRVPS 120
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D+E WL N++ ++FTK DK E + +
Sbjct: 121 DEDIEMLEWLEYNEMDYKIIFTKIDKLSN--------NERAKQLKAIKTRLVFDNEDVFF 172
Query: 283 TSSVTNQGRDEILLHMAQLRN 303
SS+TN+GRDEIL M + N
Sbjct: 173 HSSLTNKGRDEILNFMEEKLN 193
>gi|329924530|ref|ZP_08279592.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp.
HGF5]
gi|328940609|gb|EGG36929.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp.
HGF5]
Length = 214
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 110/191 (57%), Gaps = 7/191 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +AEFV S+V P D LPE AL GRSNVGKSSL+N ++ RK LA TS TPGKTQ
Sbjct: 2 KVTKAEFVISAVVPAQYPEDALPEIALAGRSNVGKSSLINRMISRKNLARTSATPGKTQQ 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N++R+ND YLVD PGYGYA + R + + + Y L+R L V L++D P
Sbjct: 62 LNYYRVNDDLYLVDFPGYGYAKVSKTQRAAFGEMIERYLLSREELKLVLLIVDMRHPPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D+ WL P+ +V TK DK K R ++++ +E + F+ ++M
Sbjct: 122 DDISMYEWLQHYNRPVCVVATKADKIPK-----TRRQKHVKIVKETLG--FKPYHSFVMF 174
Query: 284 SSVTNQGRDEI 294
SS G+DE+
Sbjct: 175 SSELGLGKDEL 185
>gi|138896215|ref|YP_001126668.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus
thermodenitrificans NG80-2]
gi|196250171|ref|ZP_03148865.1| small GTP-binding protein [Geobacillus sp. G11MC16]
gi|166225956|sp|A4IRG9.1|ENGB_GEOTN RecName: Full=Probable GTP-binding protein EngB
gi|134267728|gb|ABO67923.1| GTP-binding protein-like protein [Geobacillus thermodenitrificans
NG80-2]
gi|196210355|gb|EDY05120.1| small GTP-binding protein [Geobacillus sp. G11MC16]
Length = 195
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 105/191 (54%), Gaps = 11/191 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +AE V S+V+ E P G PE AL GRSNVGKSS +N ++ RK LA TS PGKTQ +
Sbjct: 3 ITKAELVISAVKPEQYPDSGRPEVALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + INDS+Y VD+PGYG+A ++ R W K + YF R TL + LL+D P
Sbjct: 63 NFYLINDSFYFVDVPGYGFARVSKQERQKWGKMMETYFTTRETLKAALLLVDLRHPPTKD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D+ + +IP+ ++ TK DK R K++ K E L I+
Sbjct: 123 DVMMYEFFKHYEIPVIVIATKADKVPRGKQQKHAKIARETLR---------LAAGDSLIL 173
Query: 283 TSSVTNQGRDE 293
SS T QG++E
Sbjct: 174 FSSETGQGKEE 184
>gi|118581676|ref|YP_902926.1| ribosome biogenesis GTP-binding protein YsxC [Pelobacter
propionicus DSM 2379]
gi|166225967|sp|A1AU48.1|ENGB_PELPD RecName: Full=Probable GTP-binding protein EngB
gi|118504386|gb|ABL00869.1| small GTP-binding protein [Pelobacter propionicus DSM 2379]
Length = 200
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 90/148 (60%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +AEF+KS+V+ +D P + LPE A VGRSNVGKSSL+N L RK L TS TPG+TQ
Sbjct: 2 EVIKAEFIKSAVKPKDYPLETLPEVAFVGRSNVGKSSLINVLANRKSLVRTSSTPGRTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F IN LVDLPGYGYA AP ++R W + Y R L +V L++D
Sbjct: 62 INFFDINGVLTLVDLPGYGYAKAPPDVRKQWGPMIETYLARRGNLRAVVLILDIRRIPSD 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKK 251
DL+ WL IP V TKCDK K
Sbjct: 122 GDLQMLGWLETYDIPPIFVLTKCDKLSK 149
>gi|297742908|emb|CBI35744.3| unnamed protein product [Vitis vinifera]
Length = 96
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 79/95 (83%)
Query: 88 ILKGSNIVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVR 147
+L GSNIVL YA AQ+ + EFVKSS R +DCP D PEFA++GRSNVGKSSL+N+LVR
Sbjct: 2 VLPGSNIVLGPYAGHAQIKEVEFVKSSSRPKDCPKDDRPEFAILGRSNVGKSSLINALVR 61
Query: 148 RKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYG 182
+K++ALTSK PGKTQ INHF +N SWY+VDLPGYG
Sbjct: 62 KKEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYG 96
>gi|167628601|ref|YP_001679100.1| GTP-binding protein [Heliobacterium modesticaldum Ice1]
gi|238687891|sp|B0TFJ0.1|ENGB_HELMI RecName: Full=Probable GTP-binding protein EngB
gi|167591341|gb|ABZ83089.1| GTP-binding protein [Heliobacterium modesticaldum Ice1]
Length = 205
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 110/194 (56%), Gaps = 11/194 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +AEFV S+V+ E P D LPE ALVGRSNVGKSSL+N L R+ LA TS TPGKTQ
Sbjct: 2 KIKEAEFVISAVKGEQYPEDNLPEVALVGRSNVGKSSLINKLCNRRHLARTSSTPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +RIN + Y+VDLPGYGYA+ + R W + Y R L V L+D P
Sbjct: 62 LNFYRINQAAYIVDLPGYGYASVSKTQRASWGPMMEHYLKKRLQLRGVIQLVDIRHPPTK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+ WL +I ++ TK DK R + K+ ++L +E+ P I
Sbjct: 122 DDIAMREWLNHFKIGAAVIATKADKINRGRYAKHVKQIRQDLAIPKEI---------PII 172
Query: 282 MTSSVTNQGRDEIL 295
+ S+ T G++++L
Sbjct: 173 VFSAETGHGKEDVL 186
>gi|237743263|ref|ZP_04573744.1| GTP-binding protein [Fusobacterium sp. 7_1]
gi|260495114|ref|ZP_05815243.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp.
3_1_33]
gi|336401436|ref|ZP_08582205.1| GTP-binding protein engB [Fusobacterium sp. 21_1A]
gi|336420040|ref|ZP_08600286.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp.
11_3_2]
gi|423137612|ref|ZP_17125255.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum subsp. animalis F0419]
gi|229433042|gb|EEO43254.1| GTP-binding protein [Fusobacterium sp. 7_1]
gi|260197557|gb|EEW95075.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp.
3_1_33]
gi|336161023|gb|EGN64039.1| GTP-binding protein engB [Fusobacterium sp. 21_1A]
gi|336162181|gb|EGN65163.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp.
11_3_2]
gi|371959810|gb|EHO77485.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum subsp. animalis F0419]
Length = 194
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 111/193 (57%), Gaps = 10/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSD-GLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
++ +A+F+KS+V +D P EFA VGRSNVGKSSL+NSL R KLA TSKTPG+TQ
Sbjct: 2 KIRKADFIKSAVYEKDYPEQLDKIEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61
Query: 163 CINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAK 222
IN+F IND +Y+VDLPGYG+A P+E++ W + + Y ++ + VF+L+D
Sbjct: 62 LINYFLINDEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKL-VFVLLDIRRVPS 120
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D+E WL N + ++FTK DK E + +
Sbjct: 121 DEDIEMLEWLEYNDMDYKIIFTKIDKLSN--------NERAKQLKAIKTRLVFDNEDVFF 172
Query: 283 TSSVTNQGRDEIL 295
S++TN+GRDEIL
Sbjct: 173 HSAITNKGRDEIL 185
>gi|435854697|ref|YP_007316016.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Halobacteroides
halobius DSM 5150]
gi|433671108|gb|AGB41923.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Halobacteroides
halobius DSM 5150]
Length = 194
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 116/200 (58%), Gaps = 11/200 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ EFV S+ + E+ P LPE AL GRSNVGKSSL+N ++ R+KLA TS PGKTQ
Sbjct: 2 KINNPEFVCSTHKREEYPFHNLPEVALAGRSNVGKSSLINKVINRRKLAFTSSKPGKTQS 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN +++++ +Y VDLPGYG+A P +++ +W ++Y NRS L V L+ID+
Sbjct: 62 INFYKMDNYFYFVDLPGYGFAKVPDKVKEEWGVMIENYLFNRSHLEGVILVIDSRHKPTN 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP--PWI 281
DL WL + +P +V TK DK K+ + +R +E +LI+ P P+
Sbjct: 122 DDLMMYDWLLEMNMPTLIVATKVDKLKRSQ---RRQQE------KLIKERLHLTPFVPFT 172
Query: 282 MTSSVTNQGRDEILLHMAQL 301
S+ T +G+ E+ + Q
Sbjct: 173 FFSAKTGEGKKEVFKFINQF 192
>gi|340758790|ref|ZP_08695372.1| GTP-binding protein engB [Fusobacterium varium ATCC 27725]
gi|251836569|gb|EES65104.1| GTP-binding protein engB [Fusobacterium varium ATCC 27725]
Length = 196
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 102/147 (69%), Gaps = 4/147 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSD-GLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
+ QA+FVKS+V +D P EFA VGRSNVGKSSL+NS+ RKKLA TSKTPG+TQ
Sbjct: 2 NIKQADFVKSAVYEKDYPEQLNNMEFAFVGRSNVGKSSLINSITGRKKLAKTSKTPGRTQ 61
Query: 163 CINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDA-SIPA 221
IN+F+IN+ +++VDLPGYG+A P+E++ +W K T D ++ VF+L+D IP+
Sbjct: 62 LINYFKINNEFFIVDLPGYGFAKVPKEMKAEWGK-TMDRYIASPRKKLVFVLLDIRRIPS 120
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDK 248
+ D+E +L + IP ++FTK DK
Sbjct: 121 QE-DIEMLVYLDHHDIPFKIIFTKMDK 146
>gi|308070420|ref|YP_003872025.1| GTP-binding protein engB [Paenibacillus polymyxa E681]
gi|305859699|gb|ADM71487.1| Probable GTP-binding protein engB [Paenibacillus polymyxa E681]
Length = 203
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 89/145 (61%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +AEF+ S+V + P D LPE AL GRSNVGKSSL+N L+ RK LA TS TPGKTQ
Sbjct: 2 KVTKAEFIISAVGPDQFPVDALPEIALAGRSNVGKSSLINRLINRKNLARTSSTPGKTQQ 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N++RIND Y VD PGYGYA + R W + + Y L R L V ++D P
Sbjct: 62 LNYYRINDDLYFVDFPGYGYAKVSKTSRKAWGQMIESYLLEREPLKLVLQMVDLRHPPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK 248
D+ WL N +P+ +V TK DK
Sbjct: 122 DDIMMYDWLRHNGLPVCVVGTKADK 146
>gi|315645734|ref|ZP_07898858.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus vortex
V453]
gi|315279212|gb|EFU42522.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus vortex
V453]
Length = 214
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 110/191 (57%), Gaps = 7/191 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +A+FV S+V P D LPE AL GRSNVGKSSL+N ++ RK LA TS TPGKTQ
Sbjct: 2 KVTKADFVISAVVPAQYPEDALPEIALAGRSNVGKSSLINRMIARKNLARTSSTPGKTQQ 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N++R+ND YLVD PGYGYA + R + + + Y LNR L V L++D P
Sbjct: 62 LNYYRVNDDLYLVDFPGYGYAKVSKTQRAAFGEMIERYLLNREELKLVLLIVDMRHPPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D+ WL P+ +V TK DK K R ++++ ++ + F+ ++M
Sbjct: 122 DDISMYEWLQHYNRPVCVVATKADKIPK-----TRRQKHVKIVKDTLG--FKPYHSFVMF 174
Query: 284 SSVTNQGRDEI 294
SS G+DE+
Sbjct: 175 SSELGLGKDEL 185
>gi|310643601|ref|YP_003948359.1| GTPase engb [Paenibacillus polymyxa SC2]
gi|309248551|gb|ADO58118.1| GTPase EngB [Paenibacillus polymyxa SC2]
gi|392304351|emb|CCI70714.1| putative GTP-binding protein engB [Paenibacillus polymyxa M1]
Length = 203
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 89/145 (61%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +AEF+ S+V + P D LPE AL GRSNVGKSSL+N ++ RK LA TS TPGKTQ
Sbjct: 2 KVTKAEFIISAVGPDQFPVDALPEIALAGRSNVGKSSLINRMINRKNLARTSSTPGKTQQ 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N++RIND Y VD PGYGYA + R W + + Y L R L V ++D P
Sbjct: 62 LNYYRINDELYFVDFPGYGYAKVSKTSRKAWGQMIESYLLEREPLKLVLQMVDLRHPPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK 248
D+ WL N +P+ +V TK DK
Sbjct: 122 DDIMMYDWLRHNGLPVCVVGTKADK 146
>gi|373106648|ref|ZP_09520948.1| ribosome biogenesis GTP-binding protein YsxC [Stomatobaculum
longum]
gi|371651587|gb|EHO17013.1| ribosome biogenesis GTP-binding protein YsxC [Stomatobaculum
longum]
Length = 223
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 107/185 (57%), Gaps = 7/185 (3%)
Query: 117 TEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLV 176
T P LPEFA G+SNVGKSSLLN+LV RK LA TS PGKTQ IN +R+N + Y V
Sbjct: 37 TSALPESVLPEFAFAGKSNVGKSSLLNALVNRKALARTSAQPGKTQTINFYRVNGAVYFV 96
Query: 177 DLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQ 236
DLPGYGYA+A ++ W K + Y L +VFLL+D D+ +W+
Sbjct: 97 DLPGYGYASASEAVKASWGKMIERYLHEDKQLRAVFLLLDLRHAPSENDVLMYNWIIDQG 156
Query: 237 IPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILL 296
+P LV TK DK K+ + E+ +E + +T P I+ SSVT QGR+E+L
Sbjct: 157 LPAVLVGTKADKLKRSQ-----LEKQKKLLRETLGAPKET--PLILFSSVTKQGREELLR 209
Query: 297 HMAQL 301
+A++
Sbjct: 210 LVAEM 214
>gi|170289148|ref|YP_001739386.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga sp. RQ2]
gi|403253600|ref|ZP_10919901.1| GTP-binding protein YsxC [Thermotoga sp. EMP]
gi|238688853|sp|B1LBK5.1|ENGB_THESQ RecName: Full=Probable GTP-binding protein EngB
gi|170176651|gb|ACB09703.1| small GTP-binding protein [Thermotoga sp. RQ2]
gi|402811134|gb|EJX25622.1| GTP-binding protein YsxC [Thermotoga sp. EMP]
Length = 195
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 107/191 (56%), Gaps = 8/191 (4%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ E VK + D P E A VGRSNVGKSSLLN+L RK +A SKTPGKT+ I
Sbjct: 3 IRDVELVKIARTPGDYPPPLKGEVAFVGRSNVGKSSLLNALFNRK-VAFVSKTPGKTRSI 61
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + +N +Y VDLPGYGYA ++ R W + +DYF NR +L VFLL+D IP +
Sbjct: 62 NFYLVNSKYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDS 121
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D W+ IP T+V TK DK K + K+ EE+ F G + P TS
Sbjct: 122 DFMMIEWMKSLNIPFTIVLTKMDKVKMSER-AKKLEEHRKVFSR--YGEYTIIP----TS 174
Query: 285 SVTNQGRDEIL 295
SVT +G E+L
Sbjct: 175 SVTGEGISELL 185
>gi|403379302|ref|ZP_10921359.1| GTP-binding protein YsxC [Paenibacillus sp. JC66]
Length = 195
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 113/191 (59%), Gaps = 7/191 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ QAEFV S+V + P+D LPE AL GRSNVGKSSL+N ++ RK LA TS PGKTQ
Sbjct: 2 KIKQAEFVISAVSSAQYPNDALPEIALAGRSNVGKSSLINRMLGRKNLARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N++RIN+ + VDLPGYGYA + +R +W KF + Y L R L + LL+D P
Sbjct: 62 LNYYRINEQLFFVDLPGYGYAKVSKTMRAEWGKFIERYLLEREPLKLLLLLVDLRHPPTK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D WL ++IP+ +V TK DK K K + +E +Q A P IM
Sbjct: 122 DDQAMYEWLHYHEIPLCVVATKADKIPKGKWA-----RHSKQVKETLQ--LDPAIPLIMF 174
Query: 284 SSVTNQGRDEI 294
SS T G+DE+
Sbjct: 175 SSETGMGKDEL 185
>gi|390455661|ref|ZP_10241189.1| GTP-binding protein YsxC [Paenibacillus peoriae KCTC 3763]
Length = 203
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 88/145 (60%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +AEF+ S+V P D LPE AL GRSNVGKSSL+N ++ RK LA TS TPGKTQ
Sbjct: 2 KVTKAEFIISAVGPNQFPVDALPEIALAGRSNVGKSSLINRMISRKNLARTSSTPGKTQQ 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N++RIND Y VD PGYGYA + R W + + Y L R L V ++D P
Sbjct: 62 LNYYRINDDLYFVDFPGYGYAKVSKTSRKAWGQMIESYLLEREQLKLVLQMVDLRHPPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK 248
D+ WL N +P+ +V TK DK
Sbjct: 122 DDIMMYDWLRHNGLPVCVVGTKADK 146
>gi|375309928|ref|ZP_09775206.1| gtpase engb [Paenibacillus sp. Aloe-11]
gi|375077881|gb|EHS56111.1| gtpase engb [Paenibacillus sp. Aloe-11]
Length = 203
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 88/145 (60%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +AEF+ S+V P D LPE AL GRSNVGKSSL+N ++ RK LA TS TPGKTQ
Sbjct: 2 KVTKAEFIISAVGPSQFPVDALPEIALAGRSNVGKSSLINRMINRKNLARTSSTPGKTQQ 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N++RIND Y VD PGYGYA + R W + + Y L R L V ++D P
Sbjct: 62 LNYYRINDDLYFVDFPGYGYAKVSKTSRKAWGQMIESYLLEREQLKLVLQMVDLRHPPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK 248
D+ WL N +P+ +V TK DK
Sbjct: 122 DDIMMYDWLRHNGLPVCVVGTKADK 146
>gi|345023379|ref|ZP_08786992.1| GTP-binding protein YsxC [Ornithinibacillus scapharcae TW25]
Length = 193
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 110/193 (56%), Gaps = 13/193 (6%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V AE V S+V + P+D LPE AL GRSNVGKSS +N L+ RK LA TS PGKTQ
Sbjct: 2 KVTNAEIVISAVSQKQYPNDQLPEIALAGRSNVGKSSFINKLINRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +RIND++Y VD+PGYGYA + R W K ++YF R TL +V L+ D
Sbjct: 62 LNFYRINDAFYFVDVPGYGYAKVSKTEREKWGKMMEEYFQTRQTLKAVLLITDIRHEPTR 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLN-DFQELIQGFFQTAPPW 280
D++ +L ++P+ ++ TK DK + K+ KR L D +LI F
Sbjct: 122 DDIQMYEFLKHFELPVVVIATKLDKIPKGKRAQHIKRTINTLQMDKGDLILPF------- 174
Query: 281 IMTSSVTNQGRDE 293
SS T +G+DE
Sbjct: 175 ---SSETGEGKDE 184
>gi|354583582|ref|ZP_09002480.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus lactis
154]
gi|353197462|gb|EHB62943.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus lactis
154]
Length = 216
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 110/191 (57%), Gaps = 7/191 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +AEFV S+V P D LPE AL GRSNVGKSSL+N ++ RK LA TS TPGKTQ
Sbjct: 2 KVTKAEFVISAVGPAQYPEDALPEIALAGRSNVGKSSLINRMISRKNLARTSATPGKTQQ 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N++R+N+ YLVD PGYGYA + R + + + Y L+R L V L++D P
Sbjct: 62 LNYYRVNEDLYLVDFPGYGYAKVSKSQRAAFGEMVEKYLLSRDELKLVLLVVDMRHPPTK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D+ WL P+ +V TK DK K R ++++ +E + FQ ++M
Sbjct: 122 DDVSMYEWLQHYDRPVCVVATKADKIPK-----TRRQKHVKIVKETLG--FQPHHSFVMF 174
Query: 284 SSVTNQGRDEI 294
SS G++E+
Sbjct: 175 SSELGLGKEEL 185
>gi|374319916|ref|YP_005073045.1| GTP-binding protein YsxC [Paenibacillus terrae HPL-003]
gi|357198925|gb|AET56822.1| GTP-binding protein YsxC [Paenibacillus terrae HPL-003]
Length = 204
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 89/145 (61%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +AEF+ S+V + P D LPE AL GRSNVGKSSL+N L+ RK LA TS TPGKTQ
Sbjct: 2 KVTKAEFIISAVGPDQFPVDALPEIALAGRSNVGKSSLINRLISRKNLARTSSTPGKTQQ 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N++RIND Y VD PGYGYA + R W + + Y L R L V ++D P
Sbjct: 62 LNYYRINDDLYFVDFPGYGYAKVSKTSRKAWGQMIESYLLEREPLKLVLQMVDLRHPPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK 248
D+ WL + +P+ +V TK DK
Sbjct: 122 DDIMMHDWLRHHGLPVCVVGTKADK 146
>gi|311031430|ref|ZP_07709520.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus sp. m3-13]
Length = 194
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 110/191 (57%), Gaps = 7/191 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V QAE V S+V+ E PS+ LPEFAL GRSNVGKSS +N ++ RK LA TS PGKTQ
Sbjct: 2 KVTQAEIVISAVKPEQYPSEFLPEFALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IN+ + VD+PGYG+A P+ R W + + Y NR L +V ++D P
Sbjct: 62 LNFYLINEMLHFVDVPGYGFAKVPKSERDAWGRMMETYLTNREQLRAVLQIVDLRHPPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D+ +L ++P+ ++ TK DK K K +++L +E + I+
Sbjct: 122 DDVTMYEYLKHYELPVVVIATKADKIPKGK-----WQKHLKVIKETLG--MDKEDELILF 174
Query: 284 SSVTNQGRDEI 294
SS T QG+DE+
Sbjct: 175 SSETGQGKDEV 185
>gi|257126668|ref|YP_003164782.1| ribosome biogenesis GTP-binding protein YsxC [Leptotrichia buccalis
C-1013-b]
gi|257050607|gb|ACV39791.1| small GTP-binding protein [Leptotrichia buccalis C-1013-b]
Length = 195
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 110/193 (56%), Gaps = 10/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPS-DGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
++ ++EFVKS+V +D P + + EF+ +GRSNVGKSSL+NSL +RK LA TSKTPG+TQ
Sbjct: 2 EINKSEFVKSAVVEKDYPDFNNIVEFSFIGRSNVGKSSLINSLTKRKSLARTSKTPGRTQ 61
Query: 163 CINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAK 222
IN+F IND + VDLPGYG+A P ++ +W K + Y ++ V VFLL+D
Sbjct: 62 LINYFLINDKIHFVDLPGYGFAKVPDAVKKNWGKTIESYLISNREKV-VFLLLDLRRVPS 120
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D+E WL I ++FTK DK E +E+ +
Sbjct: 121 NEDMEMLKWLEHFGIEYYIIFTKADKLSN--------NEKFKQLKEIRKKLVFKNEDVFF 172
Query: 283 TSSVTNQGRDEIL 295
SS+ N GR+E+L
Sbjct: 173 YSSLKNTGREELL 185
>gi|254515981|ref|ZP_05128041.1| GTP-binding protein EngB [gamma proteobacterium NOR5-3]
gi|219675703|gb|EED32069.1| GTP-binding protein EngB [gamma proteobacterium NOR5-3]
Length = 231
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 89/142 (62%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+AEF+ S+ + CP D E A GRSN GKSS +NSL + KLA TSKTPG+TQ IN
Sbjct: 24 KAEFLTSAAKVSQCPDDSGWEVAFAGRSNAGKSSAINSLTQNHKLARTSKTPGRTQLINF 83
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + + +VDLPGYGYA P++L+ DW + + Y R +L + LL D P +P DL
Sbjct: 84 FTVGEQQRIVDLPGYGYAKVPQKLKQDWTRQMEAYLQERQSLRGLILLSDCRHPLQPFDL 143
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
+ W + ++P+ ++ TKCDK
Sbjct: 144 QMLGWAAEAEMPVHMLLTKCDK 165
>gi|347542089|ref|YP_004856725.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus
Arthromitus sp. SFB-rat-Yit]
gi|346985124|dbj|BAK80799.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus
Arthromitus sp. SFB-rat-Yit]
Length = 188
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 95/144 (65%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ ++F+KS V++ED P+DGL E A+VGRSNVGKSSL+NS+++RK+LA S TPGKT+ +
Sbjct: 3 IYDSKFIKSVVKSEDFPNDGLKEIAIVGRSNVGKSSLINSMLQRKRLAKVSSTPGKTRTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F IN+ +YLVDLPGYGYA + R W + YF NR+ + V LLID+
Sbjct: 63 NFFLINNLFYLVDLPGYGYAKLSKSERNSWKYMVESYFDNRACIDKVILLIDSRHAPFES 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK 248
D+ W+ + + ++ TK DK
Sbjct: 123 DIVMYDWINSLKYKLDIIATKSDK 146
>gi|296134050|ref|YP_003641297.1| ribosome biogenesis GTP-binding protein YsxC [Thermincola potens
JR]
gi|296032628|gb|ADG83396.1| ribosome biogenesis GTP-binding protein YsxC [Thermincola potens
JR]
Length = 205
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 106/193 (54%), Gaps = 11/193 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ AEF+ S+ + P +G PE A GRSNVGKSSL+N+L RK LA TS PGKTQ +
Sbjct: 3 ITAAEFIISAPGPKQYPVEGYPEIAFAGRSNVGKSSLINTLTNRKGLAKTSSRPGKTQLL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + IN S Y VDLPGYG+A +E ++ W K ++Y NR LV+V LID
Sbjct: 63 NFYLINKSLYFVDLPGYGFARVSKETKSYWGKMIENYLKNREELVAVVQLIDIRHAPSRD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP--PWIM 282
D+ WL +IP LV K DK + K ++I+ AP P ++
Sbjct: 123 DITMHQWLKHYRIPTVLVLNKADKITRGK---------WAQHAKIIRQSLMPAPETPVVV 173
Query: 283 TSSVTNQGRDEIL 295
S+ T QGR+E+L
Sbjct: 174 FSAETRQGREELL 186
>gi|409913458|ref|YP_006891923.1| GTPase EngB [Geobacter sulfurreducens KN400]
gi|298507043|gb|ADI85766.1| GTPase EngB [Geobacter sulfurreducens KN400]
Length = 206
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 100/192 (52%), Gaps = 10/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+ AEFV S R E P L E A VGRSNVGKSSL+N LV RK L TS TPG+TQ
Sbjct: 3 NITSAEFVTSGTRPEHYPPGDLLEIAFVGRSNVGKSSLINVLVNRKSLVRTSSTPGRTQL 62
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN FR+N S LVDLPGYG+A P E++ W + Y RS L V L++D
Sbjct: 63 INFFRVNGSLMLVDLPGYGFARVPPEVKRQWGPMVETYLAGRSCLACVVLIVDVRRTPAE 122
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI-M 282
D WL IP+ +V TKCDK K + + LI AP +
Sbjct: 123 EDRLMLQWLRAYDIPVLVVITKCDKVSKNERAKQ---------ASLISRTLGLAPDEMAF 173
Query: 283 TSSVTNQGRDEI 294
S+++ +GRD I
Sbjct: 174 FSALSREGRDAI 185
>gi|39998104|ref|NP_954055.1| GTP-binding protein YsxC [Geobacter sulfurreducens PCA]
gi|81831965|sp|Q748I9.1|ENGB_GEOSL RecName: Full=Probable GTP-binding protein EngB
gi|39985049|gb|AAR36405.1| GTPase EngB [Geobacter sulfurreducens PCA]
Length = 206
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 100/192 (52%), Gaps = 10/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+ AEFV S R E P L E A VGRSNVGKSSL+N LV RK L TS TPG+TQ
Sbjct: 3 NITSAEFVTSGTRPEHYPPGDLLEIAFVGRSNVGKSSLINVLVNRKSLVRTSSTPGRTQL 62
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN FR+N S LVDLPGYG+A P E++ W + Y RS L V L++D
Sbjct: 63 INFFRVNGSLMLVDLPGYGFARVPPEVKRQWGPMVETYLAGRSCLACVVLIVDVRRTPAE 122
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI-M 282
D WL IP+ +V TKCDK K + + LI AP +
Sbjct: 123 EDRLMLQWLRAYDIPVLVVITKCDKVSKNERAKQ---------ASLISRTLGLAPDEMAF 173
Query: 283 TSSVTNQGRDEI 294
S+++ +GRD I
Sbjct: 174 FSALSREGRDAI 185
>gi|387819497|ref|YP_005679844.1| GTP-binding protein EngB [Clostridium botulinum H04402 065]
gi|322807541|emb|CBZ05116.1| GTP-binding protein EngB [Clostridium botulinum H04402 065]
Length = 199
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 11/202 (5%)
Query: 96 LSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTS 155
+ + + + ++ +AEFV S+V+ P DG PE A VGRSNVGKS+L+N+L R+KL S
Sbjct: 1 MERLSMEMEIKKAEFVISAVKKTQYPEDGRPEVAFVGRSNVGKSTLINTLTNRRKLVKVS 60
Query: 156 KTPGKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLI 215
TPGKT+ IN F IND+ Y VDLPGYGYA ++ + +W + Y + R L + LL+
Sbjct: 61 STPGKTRLINFFVINDNMYFVDLPGYGYAKVSKKEKENWGYIMEQYLVERDQLKKIVLLV 120
Query: 216 DASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQ 275
D+ D+ +W+ + +V TK DK K+ ++N +++I+ +
Sbjct: 121 DSRHKPTSDDINMYNWIKHYNYEVLVVGTKLDKLKR---------NDINKNKKIIRDTLK 171
Query: 276 TAP--PWIMTSSVTNQGRDEIL 295
++ SS++ +G++E+L
Sbjct: 172 MDKDDKILLISSLSKEGKEEVL 193
>gi|293376040|ref|ZP_06622293.1| ribosome biogenesis GTP-binding protein YsxC [Turicibacter
sanguinis PC909]
gi|325844606|ref|ZP_08168249.1| ribosome biogenesis GTP-binding protein YsxC [Turicibacter sp.
HGF1]
gi|292645341|gb|EFF63398.1| ribosome biogenesis GTP-binding protein YsxC [Turicibacter
sanguinis PC909]
gi|325489031|gb|EGC91418.1| ribosome biogenesis GTP-binding protein YsxC [Turicibacter sp.
HGF1]
Length = 208
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 105/193 (54%), Gaps = 11/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+ +AE++KS V+ E P+DGLPE GRSNVGKSS +NSL RK LA S PGKTQ
Sbjct: 2 HITKAEYIKSCVKAEHYPTDGLPEMIFAGRSNVGKSSFINSLTNRKHLARVSSRPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IND YLVD+PGYGYA R L+ + + ++Y + R L+ LL+D
Sbjct: 62 LNFYNINDMMYLVDVPGYGYAKVNRSLKESFGRMIEEYLVERDELILGVLLVDYRHKPTA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+ +IP ++ TK DK R + K K +E L F ++
Sbjct: 122 EDIAMYQLYKYYEIPSVVIGTKKDKVNRSQYKKQEKLIKETLG---------FDQDDVFV 172
Query: 282 MTSSVTNQGRDEI 294
SS T++GRDE+
Sbjct: 173 AYSSETHEGRDEV 185
>gi|260891335|ref|ZP_05902598.1| ribosome biogenesis GTP-binding protein YsxC [Leptotrichia
hofstadii F0254]
gi|260858718|gb|EEX73218.1| ribosome biogenesis GTP-binding protein YsxC [Leptotrichia
hofstadii F0254]
Length = 196
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 110/193 (56%), Gaps = 10/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPS-DGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
+++++EFVKS+V +D P + EF+ +GRSNVGKSSL+NSL +RK LA TSKTPG+TQ
Sbjct: 2 EISKSEFVKSAVVEKDYPEFNNTVEFSFIGRSNVGKSSLINSLTKRKNLARTSKTPGRTQ 61
Query: 163 CINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAK 222
IN+F IN+ + VDLPGYG+A P ++ +W K + Y ++ V VFLL+D
Sbjct: 62 LINYFLINNKIHFVDLPGYGFAKVPEAVKRNWGKTIESYLVSNREKV-VFLLLDLRRVPS 120
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D+E WL +I ++FTK DK E +E+ +
Sbjct: 121 NEDMEMLKWLEHFEIEYYIIFTKADKLSN--------NEKFKQLKEIRKKLVFKNEDVFF 172
Query: 283 TSSVTNQGRDEIL 295
SS+ N GR E+L
Sbjct: 173 YSSLKNTGRKELL 185
>gi|410659262|ref|YP_006911633.1| GTP-binding protein EngB [Dehalobacter sp. DCA]
gi|409021617|gb|AFV03648.1| GTP-binding protein EngB [Dehalobacter sp. DCA]
Length = 203
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 90/154 (58%), Gaps = 4/154 (2%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+AEF+ S+V+ + P PE A+ GRSNVGKSSL+N LV RK LA KTPGKTQ IN
Sbjct: 5 KAEFMISAVKPQQYPEGTRPELAVSGRSNVGKSSLINKLVNRKGLAKVGKTPGKTQTINF 64
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F IND WYLVDLPGYGYA +E R W K + YF R L V L+D D
Sbjct: 65 FNINDEWYLVDLPGYGYAKVSQETRMQWGKMMQTYFRLRENLKGVIQLVDIRHQPTEEDR 124
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPE 260
L N IP+ +V TK DK + G+RP+
Sbjct: 125 MMLEMLKVNNIPVLVVATKADKIAR----GQRPK 154
>gi|291280219|ref|YP_003497054.1| GTP-binding protein [Deferribacter desulfuricans SSM1]
gi|290754921|dbj|BAI81298.1| GTP-binding protein [Deferribacter desulfuricans SSM1]
Length = 191
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 105/188 (55%), Gaps = 8/188 (4%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+AE++KS+V +D P LPE A VGRSNVGKSS++N+LV RKKL S+ PGKT+ IN
Sbjct: 2 KAEYIKSAVYEKDYPDTDLPEIAFVGRSNVGKSSMINTLVNRKKLVKVSQKPGKTRTINF 61
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F IND VDLPGYGYA ++ R W + Y RS L +V L+ID + D
Sbjct: 62 FNINDELIFVDLPGYGYAKVSKKDRELWKVMIETYLTKRSQLKAVVLIIDIRVGPTNDDK 121
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSV 286
W +P + FTKCDK K ++ L + + F +++ SSV
Sbjct: 122 LMYEWFMAYNVPTIVAFTKCDKLSNNK-----IQKQLAIIK---KEFGDGLGDYVLFSSV 173
Query: 287 TNQGRDEI 294
T +G+DE+
Sbjct: 174 TRRGKDEL 181
>gi|145219093|ref|YP_001129802.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium
phaeovibrioides DSM 265]
gi|189037185|sp|A4SCU1.1|ENGB_PROVI RecName: Full=Probable GTP-binding protein EngB
gi|145205257|gb|ABP36300.1| GTP-binding protein, HSR1-related protein [Chlorobium
phaeovibrioides DSM 265]
Length = 191
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 109/195 (55%), Gaps = 11/195 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A FV+S D P + PE GRSNVGKSSLLNSL RK LA TS TPGKT+
Sbjct: 2 KITNAAFVRSVSDLSDLPEESFPEIVFAGRSNVGKSSLLNSLTGRKGLAKTSSTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN+F +ND+ Y VD+PGYGYAA + W + Y +R+ + V LL+D+ PA
Sbjct: 62 INYFLLNDNLYFVDIPGYGYAAVSHAEKDAWGRLLAGYVGDRAAIALVVLLLDSRHPAMK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK-RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D + +L + P +V TK DK +K++ KR E+ + GF +
Sbjct: 122 SDRDMMDFLAYHDRPYGIVLTKDDKLTQKERTHAKRATESC----AMNAGFI------VS 171
Query: 283 TSSVTNQGRDEILLH 297
SSV+ +G++E+L H
Sbjct: 172 YSSVSGKGKNELLDH 186
>gi|322421712|ref|YP_004200935.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter sp. M18]
gi|320128099|gb|ADW15659.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter sp. M18]
Length = 211
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 88/149 (59%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V +F+KS+ R P LPE A GRSNVGKSSL+N LV RK L TS TPG+TQ I
Sbjct: 3 VKNTQFIKSATRPAHYPEGNLPEIAFAGRSNVGKSSLVNVLVNRKSLVRTSSTPGRTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F++ND + LVDLPGYGYA P ++ DW + Y R+ L V L++D
Sbjct: 63 NFFQVNDDFMLVDLPGYGYAKVPLAVKKDWRPMMETYLAKRANLRGVVLILDIRRVPNED 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
DL+ +WL +P +V TKCDK K +
Sbjct: 123 DLQMLAWLRAYSVPPIIVVTKCDKLSKNE 151
>gi|95931072|ref|ZP_01313799.1| GTP-binding [Desulfuromonas acetoxidans DSM 684]
gi|95132881|gb|EAT14553.1| GTP-binding [Desulfuromonas acetoxidans DSM 684]
Length = 202
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 106/191 (55%), Gaps = 8/191 (4%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
Q+ A+FVKS+ R + P PE A GRSNVGKSSLLN +V+RK L TS TPG+TQ
Sbjct: 2 QIKTAQFVKSATRPGNYPPAERPEIAFAGRSNVGKSSLLNVMVQRKSLVRTSSTPGRTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F +N+ YLVDLPGYG+A P ++ W + Y +R +L +V +L D +
Sbjct: 62 INFFDLNEEIYLVDLPGYGFAKVPMAVKKQWGPMIQTYLQSRQSLCAVVVLFDIRRVPRE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
DL+ WL + ++P V TK DK + + + + + A + +
Sbjct: 122 EDLQLLDWLEEYEVPTIPVITKVDKVSRNRRAAQ--------IAPIAEATGLPAEAFSLF 173
Query: 284 SSVTNQGRDEI 294
S++T +GRDEI
Sbjct: 174 SALTKEGRDEI 184
>gi|308274309|emb|CBX30908.1| Probable GTP-binding protein engB [uncultured Desulfobacterium sp.]
Length = 202
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 86/147 (58%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ AEFVKS+V+ P + PE A GRSNVGKSSL+N+L+ RK L TS TPG+TQ I
Sbjct: 3 IKSAEFVKSAVKPSQYPEESQPEIAFAGRSNVGKSSLINTLLNRKNLVKTSSTPGRTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F IND+ VD+PGYGYA P +R W + Y R TL V L++D P
Sbjct: 63 NFFLINDTLGFVDIPGYGYAKVPAAVRKTWGTMIETYIQTRKTLKGVVLILDLRRIPGPE 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKK 251
++ + WL IP LV TK DK K
Sbjct: 123 EITFMDWLNYYNIPFILVLTKADKLSK 149
>gi|395242947|ref|ZP_10419935.1| Probable GTP-binding protein EngB [Lactobacillus hominis CRBIP
24.179]
gi|394484767|emb|CCI80943.1| Probable GTP-binding protein EngB [Lactobacillus hominis CRBIP
24.179]
Length = 194
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 97/148 (65%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +EFV S+V + P D LPEFAL GRSNVGKSSL+N++ R+KLA TS+ PGKTQ
Sbjct: 2 KVNSSEFVISAVSNKQYPKDDLPEFALAGRSNVGKSSLINTITNRRKLARTSQQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N ++IND+ YLVD+PGYGYA ++ R + + +DY R+ L + LL+DA
Sbjct: 62 LNFYKINDALYLVDVPGYGYAKVSKKQREQFGEMIQDYLETRADLKGLILLVDARHDPTK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKK 251
D+ +++ +P+ +V TK DK KK
Sbjct: 122 DDINMFNYMTYLDLPILVVATKMDKLKK 149
>gi|452995866|emb|CCQ92254.1| GTPase involved in ribosome 50S subunit assembly [Clostridium
ultunense Esp]
Length = 215
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 104/188 (55%), Gaps = 7/188 (3%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QAEF+ S+V P DGLPE AL GRSNVGKSS +NS++ RK LA S PGKTQ +N
Sbjct: 5 QAEFIGSAVHPSQYPQDGLPEIALAGRSNVGKSSFINSMLNRKNLARISSKPGKTQTLNF 64
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
+R+ +Y VDLPGYGYA ++ R W + Y R TL+ + L+D P D
Sbjct: 65 YRVGGRFYFVDLPGYGYAEVSKKEREAWGAMIERYIKGRKTLLFLIQLVDIRHPPSGQDR 124
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSV 286
+ W+ + IP +V TK DK + R + +LN+ ++++ P SS
Sbjct: 125 QMREWIVHSGIPSLVVATKADKISR-----GRWQAHLNEIKKILS--LTPEDPLFPYSSE 177
Query: 287 TNQGRDEI 294
T GR+E+
Sbjct: 178 TKVGREEV 185
>gi|168183544|ref|ZP_02618208.1| GTP-binding protein [Clostridium botulinum Bf]
gi|237796683|ref|YP_002864235.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
Ba4 str. 657]
gi|182673313|gb|EDT85274.1| GTP-binding protein [Clostridium botulinum Bf]
gi|229260786|gb|ACQ51819.1| GTP-binding protein [Clostridium botulinum Ba4 str. 657]
Length = 194
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 114/196 (58%), Gaps = 11/196 (5%)
Query: 102 DAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
+ ++ +AEFV S+V+ P DG PE A VGRSNVGKS+L+N+L R+KL S TPGKT
Sbjct: 2 EMEIKKAEFVISAVKRGQYPEDGRPEIAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKT 61
Query: 162 QCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
+ IN F IND+ Y VDLPGYGYA ++ + +W + Y + R+ L + LL+D+
Sbjct: 62 RLINFFLINDNMYFVDLPGYGYAKVSKKEKENWGYIMEQYLVERNQLKKIVLLVDSRHKP 121
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP--P 279
D+ +W+ + +V TK DK K+ ++N +++I+ +
Sbjct: 122 TSDDINMYNWIKHYNYEVLVVGTKLDKLKR---------NDINKNKKIIRDTLKMDKDDK 172
Query: 280 WIMTSSVTNQGRDEIL 295
++ SS++ +G++E+L
Sbjct: 173 ILLISSLSKEGKEEVL 188
>gi|148381176|ref|YP_001255717.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
A str. ATCC 3502]
gi|153931772|ref|YP_001385551.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
A str. ATCC 19397]
gi|153935229|ref|YP_001388957.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
A str. Hall]
gi|153938105|ref|YP_001392578.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
F str. Langeland]
gi|168179123|ref|ZP_02613787.1| GTP-binding protein [Clostridium botulinum NCTC 2916]
gi|170757263|ref|YP_001782866.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
B1 str. Okra]
gi|226950655|ref|YP_002805746.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
A2 str. Kyoto]
gi|384463546|ref|YP_005676141.1| GTP-binding protein [Clostridium botulinum F str. 230613]
gi|421839007|ref|ZP_16272694.1| GTP-binding protein YsxC [Clostridium botulinum CFSAN001627]
gi|148290660|emb|CAL84789.1| probable GTP-binding protein Engb [Clostridium botulinum A str.
ATCC 3502]
gi|152927816|gb|ABS33316.1| GTP-binding protein [Clostridium botulinum A str. ATCC 19397]
gi|152931143|gb|ABS36642.1| GTP-binding protein [Clostridium botulinum A str. Hall]
gi|152934001|gb|ABS39499.1| GTP-binding protein [Clostridium botulinum F str. Langeland]
gi|169122475|gb|ACA46311.1| GTP-binding protein [Clostridium botulinum B1 str. Okra]
gi|182669944|gb|EDT81920.1| GTP-binding protein [Clostridium botulinum NCTC 2916]
gi|226842026|gb|ACO84692.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
A2 str. Kyoto]
gi|295320563|gb|ADG00941.1| GTP-binding protein [Clostridium botulinum F str. 230613]
gi|409736332|gb|EKN37764.1| GTP-binding protein YsxC [Clostridium botulinum CFSAN001627]
Length = 194
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 113/196 (57%), Gaps = 11/196 (5%)
Query: 102 DAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
+ ++ +AEFV S+V+ P DG PE A VGRSNVGKS+L+N+L R+KL S TPGKT
Sbjct: 2 EMEIKKAEFVISAVKKTQYPEDGRPEVAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKT 61
Query: 162 QCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
+ IN F IND+ Y VDLPGYGYA ++ + +W + Y + R L + LL+D+
Sbjct: 62 RLINFFVINDNMYFVDLPGYGYAKVSKKEKENWGYIMEQYLVERDQLKKIVLLVDSRHKP 121
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP--P 279
D+ +W+ + +V TK DK K+ ++N +++I+ +
Sbjct: 122 TSDDINMYNWIKHYNYEVLVVGTKLDKLKR---------NDINKNKKIIRDTLKMDKDDK 172
Query: 280 WIMTSSVTNQGRDEIL 295
++ SS++ +G++E+L
Sbjct: 173 ILLISSLSKEGKEEVL 188
>gi|385799533|ref|YP_005835937.1| ribosome biogenesis GTP-binding protein YsxC [Halanaerobium
praevalens DSM 2228]
gi|309388897|gb|ADO76777.1| ribosome biogenesis GTP-binding protein YsxC [Halanaerobium
praevalens DSM 2228]
Length = 199
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 92/145 (63%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +AEF KS + EDCP PE A GRSNVGKSSL+N + ++KKLA TS TPG+TQC
Sbjct: 2 KINKAEFYKSVYKYEDCPRLQQPEVAFSGRSNVGKSSLINRMTKQKKLARTSNTPGRTQC 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N+F ++D +YLVDLPGYG+A P++++ DW + Y R LV V +ID+
Sbjct: 62 LNYFNVDDKFYLVDLPGYGFANVPQKVKDDWAELIDTYLNYRENLVGVVQIIDSRHKPTK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK 248
D +WL + + +V TK DK
Sbjct: 122 DDKLMVNWLQASGLNFLIVATKVDK 146
>gi|395239295|ref|ZP_10417177.1| Probable GTP-binding protein engB [Lactobacillus gigeriorum CRBIP
24.85]
gi|394476533|emb|CCI87154.1| Probable GTP-binding protein engB [Lactobacillus gigeriorum CRBIP
24.85]
Length = 198
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 106/190 (55%), Gaps = 16/190 (8%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +E+ S+VR + P D LPE A+ GRSNVGKSSL+N+ V RK LA TS PGKTQ +
Sbjct: 3 IKNSEYAVSAVREDQYPKDELPELAMAGRSNVGKSSLINTFVNRKNLARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N +R+ND +YLVD+PGYGYA ++ R ++ + +DY R+ L + +L+D
Sbjct: 63 NFYRVNDEFYLVDVPGYGYARVSQKKRQEFGEMIQDYLETRANLEGILILVDGRHEPTKD 122
Query: 225 DL---EYASWLGQNQIPMTLVFTKCDKRKK----------KKNGGKRPEENLNDFQELIQ 271
D+ +YA +L IP+ +V TK DK K+ KK RPE+ L F +
Sbjct: 123 DIAMYQYAQYLN---IPILVVATKIDKVKRNQRNKSIAGIKKAMNLRPEDELLTFSSFDK 179
Query: 272 GFFQTAPPWI 281
WI
Sbjct: 180 TNLDKLSTWI 189
>gi|197120176|ref|YP_002140603.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter
bemidjiensis Bem]
gi|238690880|sp|B5EEM1.1|ENGB_GEOBB RecName: Full=Probable GTP-binding protein EngB
gi|197089536|gb|ACH40807.1| GTPase EngB [Geobacter bemidjiensis Bem]
Length = 214
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 88/151 (58%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V Q EF+KS+ + P LPE A GRSNVGKSSL+N LV RK L TS TPG+TQ I
Sbjct: 3 VKQTEFIKSATKPAHYPEGNLPEIAFAGRSNVGKSSLVNVLVNRKNLVRTSSTPGRTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F++ND + LVDLPGYGYA P ++ +W + Y R L V L++D
Sbjct: 63 NFFQVNDDFMLVDLPGYGYAKVPLAVKKEWRPMMETYLSKRRNLRGVVLILDIRRTPTEE 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNG 255
DL+ +WL +P +V TKCDK K +
Sbjct: 123 DLQMLAWLRAFSVPPIVVITKCDKVSKNERA 153
>gi|424826853|ref|ZP_18251704.1| GTP-binding protein YsxC [Clostridium sporogenes PA 3679]
gi|365980554|gb|EHN16580.1| GTP-binding protein YsxC [Clostridium sporogenes PA 3679]
Length = 194
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 112/196 (57%), Gaps = 11/196 (5%)
Query: 102 DAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
+ ++ +AEFV S+V+ P DG PE A VGRSNVGKS+L+N+L R+KL S TPGKT
Sbjct: 2 EMEIKKAEFVISAVKKAQYPGDGRPEIAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKT 61
Query: 162 QCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
+ IN F IND+ Y VDLPGYGYA ++ + +W + Y + R L + LL+D+
Sbjct: 62 RLINFFLINDNMYFVDLPGYGYAKVSKKEKENWGYIMEQYLVERDQLKKIVLLVDSRHKP 121
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP--P 279
D+ +W+ + +V TK DK K+ ++N +++I+ +
Sbjct: 122 TGDDINMYNWIKHYNYEVLVVGTKLDKLKR---------NDINKNKKIIRDTLKMDKDDK 172
Query: 280 WIMTSSVTNQGRDEIL 295
++ SS+ +G++E+L
Sbjct: 173 ILLISSLNKEGKEEVL 188
>gi|440781229|ref|ZP_20959571.1| GTP-binding protein YsxC [Clostridium pasteurianum DSM 525]
gi|440220834|gb|ELP60040.1| GTP-binding protein YsxC [Clostridium pasteurianum DSM 525]
Length = 194
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 89/145 (61%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ QAEF+ S+V+ E P D LPE A VGRSNVGKSS++N+L RKKL S TPGKT+
Sbjct: 2 EIKQAEFIISAVKREQYPKDQLPEIAFVGRSNVGKSSIINALTNRKKLVKVSGTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F IND+ Y VDLPGYGYA +E + DW K + Y NR+ L V LL+D
Sbjct: 62 INFFLINDNSYFVDLPGYGYAKISKEQKKDWGKIIETYLKNRNPLKKVVLLLDCRRIPNE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK 248
D+ +W+ ++ TK DK
Sbjct: 122 DDILMYNWIKHYGYNCMIISTKSDK 146
>gi|239827921|ref|YP_002950545.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp.
WCH70]
gi|259645899|sp|C5D5L1.1|ENGB_GEOSW RecName: Full=Probable GTP-binding protein EngB
gi|239808214|gb|ACS25279.1| small GTP-binding protein [Geobacillus sp. WCH70]
Length = 193
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 107/191 (56%), Gaps = 11/191 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V +AE S+V+ E P LPEFAL GRSNVGKSS +N ++ RK LA TS PGKTQ +
Sbjct: 3 VTKAEIAVSAVKPEQYPDGALPEFALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + IN+S+Y VD+PGYG+A ++ R W K + YF R L +V L++D P
Sbjct: 63 NFYLINESFYFVDVPGYGFARVSKKEREAWGKMMETYFTTREQLRAVVLIVDLRHPPTKD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D+ +L QIP ++ TK DK + K + K E LN ++ I+
Sbjct: 123 DVMMYEFLKHYQIPTIIIATKADKVPKGKWQKHLKVVRETLNIIED---------DKLIL 173
Query: 283 TSSVTNQGRDE 293
S+ T QG++E
Sbjct: 174 FSAETGQGKEE 184
>gi|253702485|ref|YP_003023674.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter sp. M21]
gi|259645898|sp|C6E8C5.1|ENGB_GEOSM RecName: Full=Probable GTP-binding protein EngB
gi|251777335|gb|ACT19916.1| small GTP-binding protein [Geobacter sp. M21]
Length = 214
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 87/151 (57%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V EF+KS+ R P LPE A GRSNVGKSSL+N LV RK L TS TPG+TQ I
Sbjct: 3 VKNTEFIKSATRPAHYPEGHLPEIAFAGRSNVGKSSLVNVLVNRKNLVRTSSTPGRTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F++ND + LVDLPGYGYA P ++ +W + Y R L V L++D
Sbjct: 63 NFFQVNDDFMLVDLPGYGYAKVPLAVKKEWRPMMETYLSKRRNLRGVVLILDIRRTPTEE 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNG 255
DL+ +WL +P +V TKCDK K +
Sbjct: 123 DLQMLTWLRAFSVPPVIVITKCDKVSKNERA 153
>gi|193211890|ref|YP_001997843.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobaculum parvum
NCIB 8327]
gi|238692673|sp|B3QQY9.1|ENGB_CHLP8 RecName: Full=Probable GTP-binding protein EngB
gi|193085367|gb|ACF10643.1| small GTP-binding protein [Chlorobaculum parvum NCIB 8327]
Length = 192
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 103/193 (53%), Gaps = 11/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+ A+F S PSDG PE VGRSNVGKSSLLNSL RK LA TS TPGKT+
Sbjct: 2 NITSADFFCSYSSLNGLPSDGRPEIVFVGRSNVGKSSLLNSLCARKGLAKTSSTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN+F IN++ Y VDLPGYGYA R W K DY + R + V LL+DA P
Sbjct: 62 INYFLINENLYFVDLPGYGYAKVGHGERESWGKLLTDYVVKRDEIALVVLLVDARHPGMG 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKK-KKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D E +L P +V TK DK K+ +K+ +R E+ I +
Sbjct: 122 SDREMMEFLDYCGRPFGIVLTKWDKLKQAEKSKARRTIESCASNARFIVNY--------- 172
Query: 283 TSSVTNQGRDEIL 295
SS++ GRD++L
Sbjct: 173 -SSLSGAGRDKLL 184
>gi|342731986|ref|YP_004770825.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|384455403|ref|YP_005667997.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus
Arthromitus sp. SFB-mouse-Yit]
gi|417961245|ref|ZP_12603702.1| Putative GTP-binding protein engB [Candidatus Arthromitus sp.
SFB-2]
gi|417967675|ref|ZP_12608744.1| Putative GTP-binding protein engB [Candidatus Arthromitus sp.
SFB-co]
gi|418372236|ref|ZP_12964328.1| Putative GTP-binding protein engB [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|342329441|dbj|BAK56083.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|346983745|dbj|BAK79421.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus
Arthromitus sp. SFB-mouse-Yit]
gi|380333925|gb|EIA24416.1| Putative GTP-binding protein engB [Candidatus Arthromitus sp.
SFB-2]
gi|380340898|gb|EIA29434.1| Putative GTP-binding protein engB [Candidatus Arthromitus sp.
SFB-co]
gi|380341905|gb|EIA30350.1| Putative GTP-binding protein engB [Candidatus Arthromitus sp.
SFB-mouse-SU]
Length = 188
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 94/144 (65%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ ++F+KS+V +D P+DGL E A+VGRSNVGKSSL+NSL++RK++A S TPGKT+ +
Sbjct: 3 IYDSKFIKSAVSCKDFPNDGLKEIAIVGRSNVGKSSLINSLLQRKRIAKVSSTPGKTRTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F IN+S+YLVDLPGYGYA + R W + YF NR + V LLID+
Sbjct: 63 NFFLINNSFYLVDLPGYGYAKVSKSERDSWKYIAESYFNNRVYIDRVILLIDSRHDPFES 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK 248
D+ +W+ + ++ TK DK
Sbjct: 123 DVTMYNWINSLNYKIDIIATKSDK 146
>gi|254443449|ref|ZP_05056925.1| GTPase, putative [Verrucomicrobiae bacterium DG1235]
gi|198257757|gb|EDY82065.1| GTPase, putative [Verrucomicrobiae bacterium DG1235]
Length = 216
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 114/195 (58%), Gaps = 5/195 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEF+ S+ EDCP LPE A +GRSNVGKSSL+N L ++K LA SK PG T+
Sbjct: 2 KIESAEFLTSAKDLEDCPRSSLPEVAFIGRSNVGKSSLVNMLTKQKSLAKVSKKPGATKL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N F +N W LVDLPGYG+A + + D+++ Y + R+ L + L+DA
Sbjct: 62 LNFFTMNKWWNLVDLPGYGFAQVSKGKQVDFNEAVSGYLMGRTQLKLICALVDARNEPME 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
+DL + +WL +P +VFTK D +++++ +R N++ +QE ++ P I
Sbjct: 122 LDLGFLNWLEDCPVPHVIVFTKTD--EEQEDIWRR---NMDIYQETLEALELRVPEMIPC 176
Query: 284 SSVTNQGRDEILLHM 298
SSV GR +L ++
Sbjct: 177 SSVDRAGRGVLLQYI 191
>gi|404328531|ref|ZP_10968979.1| GTP-binding protein YsxC [Sporolactobacillus vineae DSM 21990 =
SL153]
Length = 212
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 109/192 (56%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ QAE++ S+V P DGLPE AL GRSNVGKSS +N ++ R+ L TS+ PGKTQ
Sbjct: 2 KINQAEYIISAVGPGQYPKDGLPEIALAGRSNVGKSSFINKMLGRRNLVRTSEKPGKTQK 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N+F+IN S+Y VD+PGYGYA ++ + W + + YF R L +V ++D P
Sbjct: 62 LNYFKINRSFYFVDVPGYGYAKVSKQDKAAWGRMLEAYFSEREMLSAVVHVVDLRHPPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP--PWI 281
D+ +L P+ + TK DK KK + R ++I + +P P I
Sbjct: 122 DDVTMHDYLAYFNHPVITIATKADKIKKGQYQKNR---------QIIARDLKLSPDDPLI 172
Query: 282 MTSSVTNQGRDE 293
+ SSVT G+DE
Sbjct: 173 LFSSVTGMGKDE 184
>gi|431794976|ref|YP_007221881.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430785202|gb|AGA70485.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 210
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 89/151 (58%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +AEF+ S+V P PE AL GRSNVGKSSL+N + RK LA T TPGKTQ I
Sbjct: 4 IRKAEFITSAVSVNGYPEGPEPEIALAGRSNVGKSSLINKFINRKNLARTGNTPGKTQMI 63
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N +RIND W VDLPGYGYA +EL+ +W K ++YF R L +V ++D
Sbjct: 64 NFYRINDEWGFVDLPGYGYAKVSKELKANWGKMMEEYFSRRGNLRAVIQVVDIRHIPSLE 123
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNG 255
D E +L +P+ +V TK DK K + G
Sbjct: 124 DEEMHGFLRNRGLPVLVVATKADKISKGQWG 154
>gi|417963797|ref|ZP_12605665.1| Putative GTP-binding protein engB, partial [Candidatus Arthromitus
sp. SFB-3]
gi|380331767|gb|EIA22745.1| Putative GTP-binding protein engB, partial [Candidatus Arthromitus
sp. SFB-3]
Length = 180
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 94/144 (65%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ ++F+KS+V +D P+DGL E A+VGRSNVGKSSL+NSL++RK++A S TPGKT+ +
Sbjct: 3 IYDSKFIKSAVSCKDFPNDGLKEIAIVGRSNVGKSSLINSLLQRKRIAKVSSTPGKTRTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F IN+S+YLVDLPGYGYA + R W + YF NR + V LLID+
Sbjct: 63 NFFLINNSFYLVDLPGYGYAKVSKSERDSWKYIAESYFNNRVYIDRVILLIDSRHDPFES 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK 248
D+ +W+ + ++ TK DK
Sbjct: 123 DVTMYNWINSLNYKIDIIATKSDK 146
>gi|268319666|ref|YP_003293322.1| Probable GTP-binding protein EngB [Lactobacillus johnsonii FI9785]
gi|262398041|emb|CAX67055.1| Probable GTP-binding protein EngB [Lactobacillus johnsonii FI9785]
Length = 194
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 96/148 (64%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V AEFV S+V + P D LPEFAL GRSNVGKSSL+N++V R+KLA TS+ PGKTQ
Sbjct: 2 KVVDAEFVISAVSEKQYPKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +++N+ YLVD+PGYGYA ++ R + + +DY R+ L + LL+DA
Sbjct: 62 LNFYKVNNELYLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLILLVDARHNPTA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKK 251
D+ ++ IP+ +V TK DK KK
Sbjct: 122 DDINMFNYALYLDIPILVVATKMDKLKK 149
>gi|295695317|ref|YP_003588555.1| ribosome biogenesis GTP-binding protein YsxC [Kyrpidia tusciae DSM
2912]
gi|295410919|gb|ADG05411.1| ribosome biogenesis GTP-binding protein YsxC [Kyrpidia tusciae DSM
2912]
Length = 199
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 109/193 (56%), Gaps = 14/193 (7%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
QV +A ++V + P DGLPEFALVGRSNVGKSSL+N L RKKLA TS TPG+T+
Sbjct: 2 QVTEAILAGTAVSPDRFPKDGLPEFALVGRSNVGKSSLINRLAMRKKLAHTSNTPGRTRT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +RIN +YLVDLPGYGYA + R W +++ +R +L V +ID P
Sbjct: 62 LNFYRINSRFYLVDLPGYGYAQVSKSERLRWGAMVENFLAHRESLAGVIHVIDLRHPPTA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D A WL + + + +V TK DK R + ++ ++ E L + +
Sbjct: 122 DDRLMAEWLRAHDLAVLVVATKADKIARSRWESHRRQAEATLQPSR------------CV 169
Query: 282 MTSSVTNQGRDEI 294
+ S+ T GRD++
Sbjct: 170 VFSAETGAGRDQV 182
>gi|433444019|ref|ZP_20409098.1| ribosome biogenesis GTP-binding protein [Anoxybacillus flavithermus
TNO-09.006]
gi|432001832|gb|ELK22700.1| ribosome biogenesis GTP-binding protein [Anoxybacillus flavithermus
TNO-09.006]
Length = 193
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 106/192 (55%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ E V S+VR E P+ LPEFAL GRSNVGKSS +N ++ RK A TS PGKTQ
Sbjct: 2 KITNVEMVISAVRQEQYPAGQLPEFALAGRSNVGKSSFINKMINRKNFARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +RIND++Y VD+PGYG+A + R W K + YF R L + L++D P
Sbjct: 62 LNFYRINDAFYFVDVPGYGFAKVSKTEREAWGKMIETYFTTREQLKAALLIVDLRHPPTK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+ +L IP ++ TK DK R K + K +E L LI + I
Sbjct: 122 DDVMMYEFLKHYNIPTLVIATKADKIPRGKWQQHEKVAKETL----RLI-----SDDELI 172
Query: 282 MTSSVTNQGRDE 293
+ S+ T QG+DE
Sbjct: 173 IFSAETGQGKDE 184
>gi|42518938|ref|NP_964868.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
johnsonii NCC 533]
gi|385826074|ref|YP_005862416.1| putative GTP-binding protein [Lactobacillus johnsonii DPC 6026]
gi|38606910|gb|AAR25449.1| GTP binding protein [Lactobacillus johnsonii]
gi|41583225|gb|AAS08834.1| probable GTP-binding protein EngB [Lactobacillus johnsonii NCC 533]
gi|329667518|gb|AEB93466.1| putative GTP-binding protein [Lactobacillus johnsonii DPC 6026]
Length = 194
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 96/148 (64%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V AEFV S+V + P D LPEFAL GRSNVGKSSL+N++V R+KLA TS+ PGKTQ
Sbjct: 2 KVVDAEFVISAVSEKQYPKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +++N+ YLVD+PGYGYA ++ R + + +DY R+ L + LL+DA
Sbjct: 62 LNFYKVNNELYLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLILLVDARHNPTA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKK 251
D+ ++ IP+ +V TK DK KK
Sbjct: 122 DDINMFNYALYLDIPILVVATKMDKLKK 149
>gi|409352083|ref|ZP_11234530.1| Ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
equicursoris CIP 110162]
gi|407876319|emb|CCK86588.1| Ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
equicursoris CIP 110162]
Length = 197
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 99/150 (66%), Gaps = 6/150 (4%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ Q++F S+V+ P DGL E AL GRSNVGKSSL+N++++RK LA TS +PGKTQ +
Sbjct: 3 IKQSDFAVSAVKASQYPQDGLDEIALAGRSNVGKSSLINTILQRKNLARTSSSPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N +R+ND++YLVD+PGYGYA ++ R ++ + +DY R+ L + LLID
Sbjct: 63 NFYRVNDNFYLVDVPGYGYAKVSKKQREEFGEMIQDYLETRAYLKGLILLIDGRHEPTAD 122
Query: 225 DL---EYASWLGQNQIPMTLVFTKCDKRKK 251
D+ +YA +L +P+ +V TK DK KK
Sbjct: 123 DIAMYDYAQYLN---LPILVVATKMDKIKK 149
>gi|423719070|ref|ZP_17693252.1| ribosome biogenesis GTP-binding protein ysxC [Geobacillus
thermoglucosidans TNO-09.020]
gi|383367973|gb|EID45248.1| ribosome biogenesis GTP-binding protein ysxC [Geobacillus
thermoglucosidans TNO-09.020]
Length = 193
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 107/193 (55%), Gaps = 15/193 (7%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V +AE V S+V+ E P LPEFAL GRSNVGKSS +N ++ RK LA TS PGKTQ +
Sbjct: 3 VTKAELVISAVKPEQYPDGLLPEFALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + IN+S Y VD+PGYG+A ++ R W K + YF R L +V L++D P
Sbjct: 63 NFYLINESLYFVDVPGYGFAKVSKKEREAWGKMMETYFTTREQLRAVVLIVDLRHPPTKD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK----RKKKKNGGKRPEENLNDFQELIQGFFQTAPPW 280
D+ +L +IP +V TK DK + +K R N+ D EL
Sbjct: 123 DVMMYEFLKHYEIPTIIVATKADKVPKGKWQKHQKVVRETLNIADGDEL----------- 171
Query: 281 IMTSSVTNQGRDE 293
I+ S+ T QG++E
Sbjct: 172 IVFSAETGQGKEE 184
>gi|227889796|ref|ZP_04007601.1| GTPase [Lactobacillus johnsonii ATCC 33200]
gi|227849660|gb|EEJ59746.1| GTPase [Lactobacillus johnsonii ATCC 33200]
Length = 194
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 96/148 (64%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V AEFV S+V + P D LPEFAL GRSNVGKSSL+N++V R+KLA TS+ PGKTQ
Sbjct: 2 KVVDAEFVISAVSEKQYPKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +++N+ YLVD+PGYGYA ++ R + + +DY R+ L + LL+DA
Sbjct: 62 LNFYKVNNELYLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLILLVDARHNPTA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKK 251
D+ ++ IP+ +V TK DK KK
Sbjct: 122 DDINMFNYALYLDIPILVVATKMDKLKK 149
>gi|336234454|ref|YP_004587070.1| GTP-binding protein engB [Geobacillus thermoglucosidasius C56-YS93]
gi|335361309|gb|AEH46989.1| GTP-binding protein engB [Geobacillus thermoglucosidasius C56-YS93]
Length = 193
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 107/193 (55%), Gaps = 15/193 (7%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V +AE V S+V+ E P LPEFAL GRSNVGKSS +N ++ RK LA TS PGKTQ +
Sbjct: 3 VTKAELVISAVKPEQYPDGLLPEFALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + IN+S Y VD+PGYG+A ++ R W K + YF R L +V L++D P
Sbjct: 63 NFYLINESLYFVDVPGYGFAKVSKKEREAWGKMMETYFTTREQLRAVVLIVDLRHPPTKD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK----RKKKKNGGKRPEENLNDFQELIQGFFQTAPPW 280
D+ +L +IP +V TK DK + +K R N+ D EL
Sbjct: 123 DVMMYEFLKHYEIPAIIVATKADKVPKGKWQKHQKVVRETLNIADGDEL----------- 171
Query: 281 IMTSSVTNQGRDE 293
I+ S+ T QG++E
Sbjct: 172 IVFSAETGQGKEE 184
>gi|417837748|ref|ZP_12483986.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
johnsonii pf01]
gi|338761291|gb|EGP12560.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
johnsonii pf01]
Length = 194
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 96/148 (64%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V AEFV S+V + P D LPEFAL GRSNVGKSSL+N++V R+KLA TS+ PGKTQ
Sbjct: 2 KVVDAEFVISAVSEKQYPKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +++N+ YLVD+PGYGYA ++ R + + +DY R+ L + LL+DA
Sbjct: 62 LNFYKVNNKLYLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLILLVDARHNPTA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKK 251
D+ ++ IP+ +V TK DK KK
Sbjct: 122 DDINMFNYALYLDIPILVVATKMDKLKK 149
>gi|212638449|ref|YP_002314969.1| ribosome biogenesis GTP-binding protein YsxC [Anoxybacillus
flavithermus WK1]
gi|226741194|sp|B7GH28.1|ENGB_ANOFW RecName: Full=Probable GTP-binding protein EngB
gi|212559929|gb|ACJ32984.1| GTP-binding protein YscX, possible signaling factor [Anoxybacillus
flavithermus WK1]
Length = 193
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 106/192 (55%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ E V S+V+ E P+ LPEFAL GRSNVGKSS +N ++ RK A TS PGKTQ
Sbjct: 2 KITNVEMVISAVKQEQYPAGQLPEFALAGRSNVGKSSFINKMINRKNFARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +RIND++Y VD+PGYG+A + R W K + YF R L + L++D P
Sbjct: 62 LNFYRINDAFYFVDVPGYGFAKVSKTEREAWGKMIETYFTTREQLKAALLIVDLRHPPTK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+ +L IP ++ TK DK R K + K +E L LI + I
Sbjct: 122 DDVMMYEFLKHYNIPTLVIATKADKIPRGKWQQHAKVAKETL----RLI-----SDDELI 172
Query: 282 MTSSVTNQGRDE 293
+ S+ T QG+DE
Sbjct: 173 IFSAETGQGKDE 184
>gi|392957358|ref|ZP_10322882.1| GTP-binding protein YsxC [Bacillus macauensis ZFHKF-1]
gi|391876765|gb|EIT85361.1| GTP-binding protein YsxC [Bacillus macauensis ZFHKF-1]
Length = 195
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 112/201 (55%), Gaps = 11/201 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +A+ V S+V+ E P D LPE L GRSNVGKSS +N ++ RK LA TS PGKTQ
Sbjct: 2 KVTKADIVISAVKPEQYPVDQLPEIGLAGRSNVGKSSFINKMIARKNLARTSSRPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IND Y VD+PGYG+A + R W K + Y + R L +V LL+D
Sbjct: 62 LNFYIINDQLYFVDVPGYGFAKVSKSEREAWGKMIERYIMERPQLKAVVLLVDLRHAPSV 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D+ WL +IP+ +V TKCDK K K +++L +E ++ + P ++
Sbjct: 122 DDVLMYEWLKHYEIPVIIVATKCDKIPKGKW-----QKHLKVVKETLKK--KPEDPLLLF 174
Query: 284 SSVTNQGRD----EILLHMAQ 300
SS T G+D I+ HM +
Sbjct: 175 SSETGYGKDAAWGSIIEHMKR 195
>gi|170758960|ref|YP_001788547.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
A3 str. Loch Maree]
gi|169405949|gb|ACA54360.1| GTP-binding protein [Clostridium botulinum A3 str. Loch Maree]
Length = 194
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 112/196 (57%), Gaps = 11/196 (5%)
Query: 102 DAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
+ ++ +AEF+ S+V+ P DG PE A VGRSNVGKS+L+N+L R+KL S TPGKT
Sbjct: 2 EMEIKKAEFIISAVKKGQYPEDGRPEVAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKT 61
Query: 162 QCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
+ IN F IND+ Y VDLPGYGYA + + +W + Y + R L + LL+D+
Sbjct: 62 RLINFFVINDNMYFVDLPGYGYAKVSKREKENWGYIMEQYLVERDQLKKIVLLVDSRHKP 121
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP--P 279
D+ +W+ + +V TK DK K+ ++N +++I+ +
Sbjct: 122 TSDDINMYNWIKHYNYEVLVVGTKLDKLKR---------NDINKNKKIIRDTLKMDKDDK 172
Query: 280 WIMTSSVTNQGRDEIL 295
++ SS++ +G++E+L
Sbjct: 173 ILLISSLSKEGKEEVL 188
>gi|269120910|ref|YP_003309087.1| GTP-binding protein HSR1-like protein [Sebaldella termitidis ATCC
33386]
gi|268614788|gb|ACZ09156.1| GTP-binding protein HSR1-related protein [Sebaldella termitidis
ATCC 33386]
Length = 204
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 89/145 (61%), Gaps = 1/145 (0%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ + +F+KS+V D P EFA +GRSNVGKSSL+NSL R+ LA TSKTPG+TQ
Sbjct: 2 RIKKTDFIKSAVVINDYPETTEIEFAFIGRSNVGKSSLINSLTNRRNLARTSKTPGRTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F +N+ +Y VDLPGYG+A P ++ +W K DY LN VFLL+D
Sbjct: 62 INFFDVNEDFYFVDLPGYGFAKVPEAVKKNWGKIIADY-LNSDREKIVFLLLDIRRVPSA 120
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK 248
D+E WL I ++FTK DK
Sbjct: 121 EDIEMLKWLEHYSINYYIIFTKTDK 145
>gi|187776854|ref|ZP_02993327.1| hypothetical protein CLOSPO_00393 [Clostridium sporogenes ATCC
15579]
gi|187775513|gb|EDU39315.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
sporogenes ATCC 15579]
Length = 199
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 112/196 (57%), Gaps = 11/196 (5%)
Query: 102 DAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
+ ++ +AEFV S+V+ P DG PE A VGRSNVGKS+L+N+L R+KL S TPGKT
Sbjct: 7 EMEIKKAEFVISAVKKAQYPEDGRPEIAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKT 66
Query: 162 QCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
+ IN F IN++ Y VDLPGYGYA ++ + +W + Y + R L + LL+D+
Sbjct: 67 RLINFFLINENMYFVDLPGYGYAKVSKKEKENWGYIMEQYLVERDQLKKIVLLVDSRHKP 126
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP--P 279
D+ +W+ + +V TK DK K+ ++N +++I+ +
Sbjct: 127 TSDDINMYNWIKHYNYEVLVVGTKLDKLKR---------NDINKNKKIIRDTLKMDKDDK 177
Query: 280 WIMTSSVTNQGRDEIL 295
++ SS+ +G++E+L
Sbjct: 178 ILLISSLNKEGKEEVL 193
>gi|89895940|ref|YP_519427.1| ribosome biogenesis GTP-binding protein YsxC [Desulfitobacterium
hafniense Y51]
gi|219670373|ref|YP_002460808.1| ribosome biogenesis GTP-binding protein YsxC [Desulfitobacterium
hafniense DCB-2]
gi|423076881|ref|ZP_17065589.1| ribosome biogenesis GTP-binding protein YsxC [Desulfitobacterium
hafniense DP7]
gi|119369191|sp|Q24SK9.1|ENGB_DESHY RecName: Full=Probable GTP-binding protein EngB
gi|254783194|sp|B8FVH0.1|ENGB_DESHD RecName: Full=Probable GTP-binding protein EngB
gi|89335388|dbj|BAE84983.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219540633|gb|ACL22372.1| small GTP-binding protein domain protein [Desulfitobacterium
hafniense DCB-2]
gi|361851833|gb|EHL04121.1| ribosome biogenesis GTP-binding protein YsxC [Desulfitobacterium
hafniense DP7]
Length = 201
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 91/151 (60%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +AEFV S+V + P PE AL GRSNVGKSSL+N + R+ LA T TPGKTQ +
Sbjct: 4 IRKAEFVTSAVNIKGYPELTGPEIALAGRSNVGKSSLINKFINRRNLARTGNTPGKTQML 63
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N +RIND W VDLPGYGYA +E++ +W K ++YF R L +V ++D
Sbjct: 64 NFYRINDQWSFVDLPGYGYAKVSKEIKANWGKMMEEYFSRRENLRAVIQVVDIRHVPSVE 123
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNG 255
D E ++L IP+ +V TK DK K + G
Sbjct: 124 DQEMHAFLRNRGIPVLVVATKADKISKGQWG 154
>gi|344924339|ref|ZP_08777800.1| GTP-binding protein YsxC [Candidatus Odyssella thessalonicensis
L13]
Length = 220
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 109/204 (53%), Gaps = 5/204 (2%)
Query: 98 KYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKT 157
+Y R EF++ + D +PE A GRSNVGKSSL+N+L RK LA TS T
Sbjct: 20 EYGRLLFTQSCEFIRGVQKLTDLVDFEVPEIAFAGRSNVGKSSLINALTGRKTLARTSNT 79
Query: 158 PGKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDA 217
PG+TQ +N F + YLVD+PGYGYA P+ + +W K Y R TL V++L+DA
Sbjct: 80 PGRTQQLNFFDLGGRLYLVDMPGYGYAEVPKSVVAEWRKLIDFYLRGRPTLQRVYVLLDA 139
Query: 218 SIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTA 277
+ K DLE L + + +V TKCD K G + ++ ++ ++L+Q
Sbjct: 140 RVEIKKHDLEIMEQLDKAAVSYQVVLTKCD-----KVGPLQLKKIISKLEDLLQNHPAAH 194
Query: 278 PPWIMTSSVTNQGRDEILLHMAQL 301
P + TSS G +E+ MAQ
Sbjct: 195 PTVMPTSSAKGSGIEELRAEMAQF 218
>gi|408411358|ref|ZP_11182521.1| Ribosome biogenesis GTP-binding protein YsxC [Lactobacillus sp.
66c]
gi|407874482|emb|CCK84327.1| Ribosome biogenesis GTP-binding protein YsxC [Lactobacillus sp.
66c]
Length = 197
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 98/150 (65%), Gaps = 6/150 (4%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ Q++F S+V+ P DGL E AL GRSNVGKSSL+N++++RK LA TS +PGKTQ +
Sbjct: 3 IKQSDFAVSAVKASQYPQDGLDEIALAGRSNVGKSSLINTILQRKNLARTSSSPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N +R+ND +YLVD+PGYGYA ++ R ++ + +DY R+ L + LLID
Sbjct: 63 NFYRVNDDFYLVDVPGYGYAKVSKKQREEFGEMIQDYLETRAYLKGLILLIDGRHEPTAD 122
Query: 225 DL---EYASWLGQNQIPMTLVFTKCDKRKK 251
D+ +YA +L +P+ +V TK DK KK
Sbjct: 123 DIAMYDYAQYLN---LPILVVATKMDKIKK 149
>gi|358467640|ref|ZP_09177330.1| hypothetical protein HMPREF9093_01810, partial [Fusobacterium sp.
oral taxon 370 str. F0437]
gi|357067501|gb|EHI77614.1| hypothetical protein HMPREF9093_01810, partial [Fusobacterium sp.
oral taxon 370 str. F0437]
Length = 179
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 103/177 (58%), Gaps = 9/177 (5%)
Query: 127 EFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYGYAAA 186
EFA VGRSNVGKSSL+NSL R KLA TSKTPG+TQ IN+F IND +Y+VDLPGYG+A
Sbjct: 11 EFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQLINYFLINDEFYIVDLPGYGFAKV 70
Query: 187 PRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKC 246
P+E++ W + + Y ++ + VF+L+D D+E WL N++ ++FTK
Sbjct: 71 PKEMKKQWGQTMERYIASKRKKL-VFVLLDIRRVPSDEDIEMLEWLEYNEMDYKIIFTKI 129
Query: 247 DKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQLRN 303
DK + + E FF SS+TN+GRDEIL M + N
Sbjct: 130 DKLSNNERAKQLKAIKTRLVFEKEDVFFH--------SSLTNKGRDEILTFMEEKLN 178
>gi|268318043|ref|YP_003291762.1| small GTP-binding protein [Rhodothermus marinus DSM 4252]
gi|262335577|gb|ACY49374.1| small GTP-binding protein [Rhodothermus marinus DSM 4252]
Length = 198
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 98/183 (53%), Gaps = 6/183 (3%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A F +S R ED P DGLPE A GRSNVGKSSLLN+L+R LA TS TPGKT+ +N +
Sbjct: 6 ARFFRSVTRWEDLPDDGLPEVAFAGRSNVGKSSLLNALLRAPGLARTSSTPGKTRQLNFY 65
Query: 168 RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
R+N+ Y VDLPGYGYA +E R W + Y R TL V LID+ P P+D
Sbjct: 66 RVNEQLYFVDLPGYGYARTSQEERRLWGRLITRYLQERPTLALVVHLIDSRHPPTPLDEA 125
Query: 228 YASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVT 287
+ +P + TK D K G R + + + + +Q P I TS+ T
Sbjct: 126 MMDLMRGQHVPYLIALTKAD-----KVSGNRRAQAVREVERALQARAMEV-PIIPTSAHT 179
Query: 288 NQG 290
G
Sbjct: 180 GLG 182
>gi|312110030|ref|YP_003988346.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp.
Y4.1MC1]
gi|311215131|gb|ADP73735.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp.
Y4.1MC1]
Length = 193
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 106/193 (54%), Gaps = 15/193 (7%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V +AE V S+V+ E P LPEFAL GRSNVGKSS +N ++ RK LA TS PGKTQ +
Sbjct: 3 VTKAELVISAVKPEQYPDGLLPEFALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + IN+S Y VD+PGYG+A ++ R W K YF R L +V L++D P
Sbjct: 63 NFYLINESLYFVDVPGYGFAKVSKKEREAWGKMMGTYFTTREQLRAVVLIVDLRHPPTKD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK----RKKKKNGGKRPEENLNDFQELIQGFFQTAPPW 280
D+ +L +IP +V TK DK + +K R N+ D EL
Sbjct: 123 DVMMYEFLKHYEIPAIIVATKADKVPKGKWQKHQKVVRETLNIADGDEL----------- 171
Query: 281 IMTSSVTNQGRDE 293
I+ S+ T QG++E
Sbjct: 172 IVFSAETGQGKEE 184
>gi|392395205|ref|YP_006431807.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfitobacterium dehalogenans ATCC 51507]
gi|390526283|gb|AFM02014.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 213
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 91/151 (60%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +AEFV S+V + P PE AL GRSNVGKSSL+N + R+ LA T TPGKTQ +
Sbjct: 4 IRKAEFVTSAVDIKGYPELTGPEIALAGRSNVGKSSLINKFINRRNLARTGNTPGKTQML 63
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N +RIND W VDLPGYGYA +E++ +W K ++YF R L +V ++D
Sbjct: 64 NFYRINDEWSFVDLPGYGYAKVSKEIKANWGKMMEEYFSRRENLRAVIQVVDIRHVPSVE 123
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNG 255
D E ++L IP+ +V TK DK K + G
Sbjct: 124 DQEMHAFLRNRGIPVLVVATKADKISKGQWG 154
>gi|402815462|ref|ZP_10865054.1| putative GTP-binding protein EngB [Paenibacillus alvei DSM 29]
gi|402506502|gb|EJW17025.1| putative GTP-binding protein EngB [Paenibacillus alvei DSM 29]
Length = 197
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 107/193 (55%), Gaps = 11/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEF+ S+V P DG PE L GRSNVGKSSL+N L+ RK LA TS PGKTQ
Sbjct: 2 KITNAEFIISAVGASQYPDDGFPEIGLAGRSNVGKSSLINRLIMRKNLARTSSQPGKTQQ 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N++RIND+ Y VD+PGYGYA + R W + + YF R TL V L++D
Sbjct: 62 LNYYRINDNMYFVDVPGYGYAKVSKTQRAAWGRMIEAYFQERETLKLVLLVVDLRHAPTA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP--PWI 281
D WL IP+ +V TK DK K +L + ++ +P P++
Sbjct: 122 DDCMMHDWLTHYGIPVCVVATKADKISKN---------HLPRHVKQVRTTLGLSPDAPFV 172
Query: 282 MTSSVTNQGRDEI 294
M SS T QGR+E+
Sbjct: 173 MFSSETGQGREEL 185
>gi|374603435|ref|ZP_09676414.1| GTP-binding protein YsxC [Paenibacillus dendritiformis C454]
gi|374390906|gb|EHQ62249.1| GTP-binding protein YsxC [Paenibacillus dendritiformis C454]
Length = 207
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 106/191 (55%), Gaps = 7/191 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEF+ S+V P DG PE L GRSNVGKSSL+N ++ RK LA TS PGKTQ
Sbjct: 2 KITNAEFIISAVGPAQYPDDGFPEIGLAGRSNVGKSSLINKMIMRKNLARTSSQPGKTQQ 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N++RINDS Y VD+PGYGYA + R W K + YF R L V L++D P
Sbjct: 62 LNYYRINDSMYFVDVPGYGYAKVSKVQRAAWGKMIEAYFRERDALRLVLLVVDLRHPPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D WL ++P+ +V TK DK K R ++L + + P ++
Sbjct: 122 DDCMMHQWLTHYEVPVAVVATKADKVPK-----SRWPKHLKQVRTTLG--LHADTPLVLF 174
Query: 284 SSVTNQGRDEI 294
S+ T QGR+E+
Sbjct: 175 SAETGQGREEL 185
>gi|406983139|gb|EKE04386.1| ribosome biogenesis GTP-binding protein YsxC [uncultured bacterium]
Length = 192
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 87/144 (60%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEF+ SS ++CP LPE A++GRSNVGKSS +N++ RK LA TS TPGKT+
Sbjct: 2 KIINAEFITSSDCLKNCPDFNLPEIAMIGRSNVGKSSFINAITNRKNLARTSNTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN ++IND + DLPGYGYA + + W K +DY NR L V LIDA +
Sbjct: 62 INFYKINDELIITDLPGYGYAKTSKAEQEKWRKTLEDYLTNREPLAGVIQLIDARHSVQN 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCD 247
D++ WL IP+ V TK D
Sbjct: 122 NDIQMRDWLDYYNIPVITVATKVD 145
>gi|21674964|ref|NP_663029.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium tepidum
TLS]
gi|25452938|sp|Q8KAK5.1|ENGB_CHLTE RecName: Full=Probable GTP-binding protein EngB
gi|21648196|gb|AAM73371.1| GTP-binding protein [Chlorobium tepidum TLS]
Length = 192
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 101/193 (52%), Gaps = 11/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+ A+F S PSDG PE VGRSNVGKSSLLNSL RK LA TS TPGKT+
Sbjct: 2 NITTADFFCSYSSLNGLPSDGRPEIVFVGRSNVGKSSLLNSLCARKGLAKTSSTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN+F IND+ Y VDLPGYGYA + R W K Y R + V LL+D+ P
Sbjct: 62 INYFIINDNLYFVDLPGYGYAKVGQGERESWGKLLTGYIQKRGEIALVVLLVDSRHPGMA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKK-KKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
DLE +L P +V TK DK K+ +K+ R E+ I +
Sbjct: 122 SDLEMMEFLDYCGRPFGIVLTKWDKLKQAEKSKASRTIESCAPNARFIVNY--------- 172
Query: 283 TSSVTNQGRDEIL 295
SS++ GRD +L
Sbjct: 173 -SSLSGSGRDRLL 184
>gi|376316540|emb|CCF99929.1| GTP-binding protein [uncultured Flavobacteriia bacterium]
Length = 222
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 105/199 (52%), Gaps = 12/199 (6%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V A+F+ S CP + E A +GRSNVGKSS++N + K LA TS+ PGKT+
Sbjct: 14 EVVSADFLASYPDLATCPDGEMWEIAFIGRSNVGKSSIINMITDSKDLAKTSQNPGKTRS 73
Query: 164 INHFRINDS-------WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLID 216
IN FRI W LVDLPG+GYA R R W K +D+ R L+ F LID
Sbjct: 74 INLFRIKSQTPKAEMVWDLVDLPGFGYAKFSRTERVKWRKRIRDFLEKRPKLLCTFFLID 133
Query: 217 ASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQT 276
+ ID E+ W+GQ +P ++FTK DK K K NLN I ++
Sbjct: 134 VRHSMQEIDREWLQWIGQKGLPFFIIFTKADKL--SKTALKAQLANLN---ASIGEMWEP 188
Query: 277 APPWIMTSSVTNQGRDEIL 295
P +TS+ +GRDEIL
Sbjct: 189 LPETFVTSAEKKRGRDEIL 207
>gi|352517648|ref|YP_004886965.1| GTPase [Tetragenococcus halophilus NBRC 12172]
gi|348601755|dbj|BAK94801.1| GTPase [Tetragenococcus halophilus NBRC 12172]
Length = 193
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 108/190 (56%), Gaps = 7/190 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V AE V S+V + P L E AL GRSNVGKSS +N+L+ RKKLA TS PG+TQ
Sbjct: 2 KVHAAEIVISAVSKKQYPKSALAEVALAGRSNVGKSSFINTLIDRKKLARTSSKPGRTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN + I + ++ VDLPGYGYA ++ R W + +YF NR L +V LID
Sbjct: 62 INFYLIENKFHFVDLPGYGYAKVSKQERAKWGEMIDEYFANRKQLQAVVSLIDMRHDPSE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D++ +L P+ +V TK DK K K E+ ++ +E++ F +++
Sbjct: 122 GDIQMYDFLKYYNFPVIVVATKADKAAKNKR-----EQQISRIKEILD--FDENDRFVVF 174
Query: 284 SSVTNQGRDE 293
S+VT +G++E
Sbjct: 175 STVTKEGKEE 184
>gi|189501178|ref|YP_001960648.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium
phaeobacteroides BS1]
gi|238692282|sp|B3EP28.1|ENGB_CHLPB RecName: Full=Probable GTP-binding protein EngB
gi|189496619|gb|ACE05167.1| GTP-binding protein HSR1-related [Chlorobium phaeobacteroides BS1]
Length = 192
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 106/196 (54%), Gaps = 9/196 (4%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A F KS + P + LPE VGRSNVGKS+LLNSL RK LA TS TPGKTQ
Sbjct: 2 KIRNATFYKSVSAIDHLPKEQLPEIVFVGRSNVGKSTLLNSLTARKGLAKTSSTPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN+F IN+S Y VDLPGYGYA + + +W K Y R ++ V LLID+ P
Sbjct: 62 INYFVINESCYFVDLPGYGYAKVDKGKKYEWGKLLSHYVSTRDSITLVVLLIDSRHPDME 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D A +L P +V TK DK K++ R ++ + + +
Sbjct: 122 SDHLMAEFLEHCGRPYGVVLTKYDKLKQQAKAAARLA---------VKSYSLKSKFIVNY 172
Query: 284 SSVTNQGRDEILLHMA 299
S+++ QG++E+L +A
Sbjct: 173 SAISGQGKEELLEQLA 188
>gi|315917135|ref|ZP_07913375.1| GTP-binding protein [Fusobacterium gonidiaformans ATCC 25563]
gi|317058769|ref|ZP_07923254.1| GTP-binding protein [Fusobacterium sp. 3_1_5R]
gi|313684445|gb|EFS21280.1| GTP-binding protein [Fusobacterium sp. 3_1_5R]
gi|313691010|gb|EFS27845.1| GTP-binding protein [Fusobacterium gonidiaformans ATCC 25563]
Length = 204
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 121/197 (61%), Gaps = 12/197 (6%)
Query: 104 QVAQAEFVKSSVRTEDCPSD-GLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
++ +A+++KS+V +D P EFA VGRSNVGKSSL+NSL R KLA TSKTPG+TQ
Sbjct: 2 RIKRADYLKSAVYEKDYPEILNSVEFAFVGRSNVGKSSLINSLTSRTKLARTSKTPGRTQ 61
Query: 163 CINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDA-SIPA 221
IN F IN +Y+VDLPGYG+A P+ ++ +W + Y +++ + VF+L+D IP+
Sbjct: 62 LINFFTINQEFYIVDLPGYGFAKVPKAMKKEWGSTIERYIISKRKKL-VFVLLDIRRIPS 120
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
+ D+E WL +++P ++FTK D K L D ++ I+ F +
Sbjct: 121 EE-DMEMLRWLDFHELPFKIIFTKTD-----KISNNEKFRLLKDIRKKIE--FHNEDVFF 172
Query: 282 MTSSVTNQGRDEILLHM 298
SS++++GR+E+L M
Sbjct: 173 Y-SSLSHKGREEVLQFM 188
>gi|121534152|ref|ZP_01665977.1| GTP-binding protein, HSR1-related [Thermosinus carboxydivorans
Nor1]
gi|121307255|gb|EAX48172.1| GTP-binding protein, HSR1-related [Thermosinus carboxydivorans
Nor1]
Length = 207
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 108/205 (52%), Gaps = 16/205 (7%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V +A++V S+VR + P + LPE A +GRSNVGKSSL+NSL R LA S +PGKTQ I
Sbjct: 8 VIKAQYVASAVRPDQYPPEELPEIAFIGRSNVGKSSLINSLCRHHGLARVSASPGKTQTI 67
Query: 165 NHFRIND--------SWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLID 216
N++ + WYLVDLPGYGYA A + R W +F ++YFL L V L+D
Sbjct: 68 NYYVVTAKLPNERRLEWYLVDLPGYGYARAGQTQRRQWTRFVEEYFLRSPRLKLVCQLVD 127
Query: 217 ASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQT 276
P + D+ WL + +P+ +V TK DK + + G
Sbjct: 128 LRHPPQASDVAMYGWLKTHNLPVQVVATKTDKIGRTHVA--------RHLAAIKNGLKLE 179
Query: 277 APPWIMTSSVTNQGRDEILLHMAQL 301
I S++ QGRD++L + Q+
Sbjct: 180 TGGIIAYSALNGQGRDDLLDVIGQI 204
>gi|78186100|ref|YP_374143.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium luteolum
DSM 273]
gi|119369228|sp|Q3B6D1.1|ENGB_PELLD RecName: Full=Probable GTP-binding protein EngB
gi|78166002|gb|ABB23100.1| GTP-binding protein [Chlorobium luteolum DSM 273]
Length = 207
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A F++S +D P + +PE GRSNVGKSSLLNSL RK LA TS TPGKT+
Sbjct: 2 KIINAAFIRSVSALQDLPDERVPEIVFAGRSNVGKSSLLNSLTGRKGLAKTSSTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N+F IND Y VD+PGYGYAA + W + Y R + V LL+D+ PA
Sbjct: 62 LNYFLINDDLYFVDIPGYGYAAVSHTEKDAWGRLLAGYVGGRQAIALVVLLLDSRHPAME 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK-RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D E +L + P +V TK DK +K++ KR + E I +
Sbjct: 122 SDREMMEFLAYHDRPYGIVLTKDDKLTQKERAKAKRVTASCALNAEFIVSY--------- 172
Query: 283 TSSVTNQGRDEILLH 297
SS++ +G+ E+L H
Sbjct: 173 -SSISGKGKKELLAH 186
>gi|88705359|ref|ZP_01103070.1| GTP-binding protein engB [Congregibacter litoralis KT71]
gi|88700449|gb|EAQ97557.1| GTP-binding protein engB [Congregibacter litoralis KT71]
Length = 230
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+A F+ S+ + CP D E A GRSN GKSS +NSL + KLA TSKTPG+TQ IN
Sbjct: 24 KAAFLTSAAKVSQCPEDIGWEVAFAGRSNAGKSSAINSLTQNHKLARTSKTPGRTQLINF 83
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + + +VDLPGYGYA P++L+ DW K + Y R +L + LL D P +P D
Sbjct: 84 FTVGEQQRIVDLPGYGYAKVPQKLKQDWTKQMEAYLQERQSLRGLILLSDCRHPLQPFDQ 143
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKR 258
+ +W + +P+ ++ TKCDK K GK+
Sbjct: 144 QMLTWAAEADMPVHMLLTKCDKL--SKGAGKQ 173
>gi|116629800|ref|YP_814972.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
ATCC 33323]
gi|238853431|ref|ZP_04643810.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
202-4]
gi|282851696|ref|ZP_06261061.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
224-1]
gi|311110559|ref|ZP_07711956.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
MV-22]
gi|420148371|ref|ZP_14655639.1| Putative GTP-binding protein EngB [Lactobacillus gasseri CECT 5714]
gi|122273262|sp|Q042T8.1|ENGB_LACGA RecName: Full=Probable GTP-binding protein EngB
gi|116095382|gb|ABJ60534.1| Predicted GTPase [Lactobacillus gasseri ATCC 33323]
gi|238834003|gb|EEQ26261.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
202-4]
gi|282557664|gb|EFB63261.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
224-1]
gi|311065713|gb|EFQ46053.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
MV-22]
gi|398399923|gb|EJN53519.1| Putative GTP-binding protein EngB [Lactobacillus gasseri CECT 5714]
Length = 194
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 95/148 (64%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V EFV S+V + P D LPEFAL GRSNVGKSSL+N++V R+KLA TS+ PGKTQ
Sbjct: 2 KVVDTEFVISAVSEKQYPKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +++N+ YLVD+PGYGYA ++ R + + +DY R+ L + LL+DA
Sbjct: 62 LNFYKVNNELYLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLILLVDARHDPTA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKK 251
D+ ++ IP+ +V TK DK KK
Sbjct: 122 DDINMFNYALYLDIPILVVATKMDKLKK 149
>gi|23099530|ref|NP_692996.1| ribosome biogenesis GTP-binding protein YsxC [Oceanobacillus
iheyensis HTE831]
gi|81846051|sp|Q8EPM2.1|ENGB_OCEIH RecName: Full=Probable GTP-binding protein EngB
gi|22777760|dbj|BAC14031.1| GTP-binding protein (EngB family) [Oceanobacillus iheyensis HTE831]
Length = 195
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 111/190 (58%), Gaps = 7/190 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V AE V S+V + P D LPE AL GRSNVGKSS +N L+ RK LA TS PGKTQ
Sbjct: 2 KVNHAEIVISAVSKKQYPEDQLPEIALAGRSNVGKSSFINRLINRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +RIN+S+Y VD+PGYGYA ++ R W + ++YF R TL +V L+ D
Sbjct: 62 LNFYRINESFYFVDVPGYGYAKVSKKEREKWGRMMEEYFQTRDTLRAVVLVTDLRHDPTQ 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D++ ++ +P+ ++ TK DK K K ++++N +++++ +I
Sbjct: 122 DDIQMYDFIKYFDLPVIIIGTKLDKITKNKR-----QKHINRAKQVLE--MDETDLFIPF 174
Query: 284 SSVTNQGRDE 293
S+ +G+DE
Sbjct: 175 SAEIGEGKDE 184
>gi|300361499|ref|ZP_07057676.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
JV-V03]
gi|300354118|gb|EFJ69989.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
JV-V03]
Length = 194
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 95/148 (64%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V EFV S+V + P D LPEFAL GRSNVGKSSL+N++V R+KLA TS+ PGKTQ
Sbjct: 2 KVVDTEFVISAVSEKQYPKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +++N+ YLVD+PGYGYA ++ R + + +DY R+ L + LL+DA
Sbjct: 62 LNFYKVNNELYLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLVLLVDARHDPTA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKK 251
D+ ++ IP+ +V TK DK KK
Sbjct: 122 DDINMFNYALYLDIPILVVATKMDKLKK 149
>gi|419842352|ref|ZP_14365702.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
necrophorum subsp. funduliforme ATCC 51357]
gi|386902261|gb|EIJ67103.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
necrophorum subsp. funduliforme ATCC 51357]
Length = 204
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 117/197 (59%), Gaps = 12/197 (6%)
Query: 104 QVAQAEFVKSSVRTEDCPSD-GLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
++ +A+++KS+V +D P EFA VGRSNVGKSSL+NSL R KLA TSKTPG+TQ
Sbjct: 2 RIKRADYLKSAVYEKDYPERLNSVEFAFVGRSNVGKSSLINSLTSRTKLARTSKTPGRTQ 61
Query: 163 CINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDA-SIPA 221
IN F IN +Y+VDLPGYG+A P+ ++ +W + Y ++ T + VF+L+D IP+
Sbjct: 62 LINFFLINQEFYIVDLPGYGFAKVPKAMKKEWGSTIERYIISARTKL-VFVLLDIRRIPS 120
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
+ D+E WL + +P ++FTK DK E +E+ +
Sbjct: 121 EE-DMEMLRWLDFHNLPFKIIFTKTDKISNN--------EKFRLLKEIRKKIEFHNEDVF 171
Query: 282 MTSSVTNQGRDEILLHM 298
SS++++GR+E+L M
Sbjct: 172 FYSSLSHKGREEVLQFM 188
>gi|58337155|ref|YP_193740.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
acidophilus NCFM]
gi|227903731|ref|ZP_04021536.1| GTPase [Lactobacillus acidophilus ATCC 4796]
gi|81311481|sp|Q5FKR5.1|ENGB_LACAC RecName: Full=Probable GTP-binding protein EngB
gi|58254472|gb|AAV42709.1| GTP-binding protein ENGB family [Lactobacillus acidophilus NCFM]
gi|227868618|gb|EEJ76039.1| GTPase [Lactobacillus acidophilus ATCC 4796]
Length = 196
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 103/167 (61%), Gaps = 10/167 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +E+ S+V+ E P D LPE AL GRSNVGKSSL+N+L++RK LA TS PGKTQ +
Sbjct: 3 IKSSEYAVSAVKEEQYPKDNLPEIALAGRSNVGKSSLINTLLKRKNLARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + +ND +YLVD+PGYGYA ++ R ++ + +DY R L + +LID+
Sbjct: 63 NFYLVNDDFYLVDVPGYGYAKVSQKRRQEFGEMIQDYLETRPNLKGLIILIDSRHEPTKD 122
Query: 225 DL---EYASWLGQNQIPMTLVFTKCDKRKKKKNG----GKRPEENLN 264
D+ EYA +L IP+ +V TK DK KK + G R + +LN
Sbjct: 123 DISMYEYAQYLN---IPILVVCTKMDKIKKNQTNKVMTGLRKKLDLN 166
>gi|373114185|ref|ZP_09528402.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
necrophorum subsp. funduliforme 1_1_36S]
gi|371653072|gb|EHO18478.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
necrophorum subsp. funduliforme 1_1_36S]
Length = 204
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 117/197 (59%), Gaps = 12/197 (6%)
Query: 104 QVAQAEFVKSSVRTEDCPSD-GLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
++ +A+++KS+V +D P EFA VGRSNVGKSSL+NSL R KLA TSKTPG+TQ
Sbjct: 2 RIKRADYLKSAVYEKDYPERLNSVEFAFVGRSNVGKSSLINSLTSRTKLARTSKTPGRTQ 61
Query: 163 CINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDA-SIPA 221
IN F IN +Y+VDLPGYG+A P+ ++ +W + Y ++ T + VF+L+D IP+
Sbjct: 62 LINFFIINQEFYIVDLPGYGFAKVPKAMKKEWGSTIERYIISTRTKL-VFVLLDIRRIPS 120
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
+ D+E WL + +P ++FTK DK E +E+ +
Sbjct: 121 EE-DMEMLRWLDFHNLPFKIIFTKTDKISNN--------EKFRLLKEIRKKIEFHNEDVF 171
Query: 282 MTSSVTNQGRDEILLHM 298
SS++++GR+E+L M
Sbjct: 172 FYSSLSHKGREEVLQFM 188
>gi|421501626|ref|ZP_15948585.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
necrophorum subsp. funduliforme Fnf 1007]
gi|402265778|gb|EJU15238.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
necrophorum subsp. funduliforme Fnf 1007]
Length = 204
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 117/197 (59%), Gaps = 12/197 (6%)
Query: 104 QVAQAEFVKSSVRTEDCPSD-GLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
++ +A+++KS+V +D P EFA VGRSNVGKSSL+NSL R KLA TSKTPG+TQ
Sbjct: 2 RIKRADYLKSAVYEKDYPERLNSVEFAFVGRSNVGKSSLINSLTSRTKLARTSKTPGRTQ 61
Query: 163 CINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDA-SIPA 221
IN F IN +Y+VDLPGYG+A P+ ++ +W + Y ++ T + VF+L+D IP+
Sbjct: 62 LINFFIINQEFYIVDLPGYGFAKVPKAMKKEWGSTIERYIISARTKL-VFVLLDIRRIPS 120
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
+ D+E WL + +P ++FTK DK E +E+ +
Sbjct: 121 EE-DMEMLRWLDFHNLPFKIIFTKTDKISNN--------EKFRLLKEIRKKIEFHNEDVF 171
Query: 282 MTSSVTNQGRDEILLHM 298
SS++++GR+E+L M
Sbjct: 172 FYSSLSHKGREEVLQFM 188
>gi|134300397|ref|YP_001113893.1| ribosome biogenesis GTP-binding protein YsxC [Desulfotomaculum
reducens MI-1]
gi|172044336|sp|A4J7L5.1|ENGB_DESRM RecName: Full=Probable GTP-binding protein EngB
gi|134053097|gb|ABO51068.1| small GTP-binding protein [Desulfotomaculum reducens MI-1]
Length = 205
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/146 (48%), Positives = 86/146 (58%), Gaps = 1/146 (0%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+V P LPE A VGRSNVGKSSL+N +V RK LA TS TPG+TQ
Sbjct: 2 KIVAAEFVTSAVNPGGYPPGNLPEVAFVGRSNVGKSSLINKVVNRKGLAKTSSTPGRTQL 61
Query: 164 INHFRI-NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAK 222
IN F I ND + +VDLPGYGYA P ++R W K + Y R L V LLID+
Sbjct: 62 INFFNINNDQFLMVDLPGYGYAKVPTDVRIKWGKMIEGYLKERECLKGVVLLIDSRHTPT 121
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDK 248
D + WL +P +V TK DK
Sbjct: 122 AQDKQMYEWLQYYHVPTVVVATKVDK 147
>gi|345304334|ref|YP_004826236.1| GTP-binding protein engB [Rhodothermus marinus SG0.5JP17-172]
gi|345113567|gb|AEN74399.1| GTP-binding protein engB [Rhodothermus marinus SG0.5JP17-172]
Length = 198
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 98/183 (53%), Gaps = 6/183 (3%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A F +S R ED P DGLPE A GRSNVGKSSLLN+L+R LA TS TPGKT+ +N +
Sbjct: 6 ARFFRSVTRWEDLPDDGLPEVAFAGRSNVGKSSLLNALLRAPGLARTSSTPGKTRQLNFY 65
Query: 168 RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
R+N+ Y VDLPGYGYA ++ R W + Y R TL V LID+ P P+D
Sbjct: 66 RVNEQLYFVDLPGYGYARTSQQERRLWGRLITRYLQERPTLALVVHLIDSRHPPTPLDEA 125
Query: 228 YASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVT 287
+ +P + TK D K G R + + + + +Q P I TS+ T
Sbjct: 126 MMDLMRGQHVPYLIALTKTD-----KVSGNRRAQAVREVERALQARAMEV-PIIPTSAHT 179
Query: 288 NQG 290
G
Sbjct: 180 GLG 182
>gi|220932326|ref|YP_002509234.1| HSR1-like GTP-binding protein [Halothermothrix orenii H 168]
gi|254783200|sp|B8CY70.1|ENGB_HALOH RecName: Full=Probable GTP-binding protein EngB
gi|219993636|gb|ACL70239.1| GTP-binding protein HSR1-related [Halothermothrix orenii H 168]
Length = 199
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 96/160 (60%), Gaps = 3/160 (1%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ FV S+ +D P+ PEFA GRSNVGKSSL+N+LV R+KLA TS PG+TQ
Sbjct: 2 KIKNPRFVISAYDFDDFPTHNWPEFAFSGRSNVGKSSLINTLVNRRKLARTSSRPGRTQS 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F I+D +YLVDLPGYG+A PR+++ +W + + Y NR L + ++DA
Sbjct: 62 INFFNIDDRFYLVDLPGYGFANVPRKVKEEWGRLIEGYLNNRPNLAGIVQIVDARHKPTR 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENL 263
DL W+ + IP + TK DK + G ++ +E L
Sbjct: 122 DDLMMVDWIKASGIPCLIAATKVDKISR---GSRKKQEEL 158
>gi|404494413|ref|YP_006718519.1| GTP-binding protein YsxC [Pelobacter carbinolicus DSM 2380]
gi|119369227|sp|Q3A0Y0.2|ENGB_PELCD RecName: Full=Probable GTP-binding protein EngB
gi|114843263|gb|ABA89977.2| GTPase EngB [Pelobacter carbinolicus DSM 2380]
Length = 207
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 106/196 (54%), Gaps = 10/196 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
Q+ AEF+KS+ + P LPE A GRSNVGKSSL+N LV R+ L TS TPG+TQ
Sbjct: 2 QIKSAEFIKSAAKPVGYPPGDLPEVAFAGRSNVGKSSLINVLVNRRGLVRTSSTPGRTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N F +N + LVDLPG+G+A P ++ W + T+ Y R+ L +V LL D +
Sbjct: 62 LNFFEVNQHFMLVDLPGFGFAKVPVSVKKAWGRMTRTYLEERTNLKAVVLLFDIRREPRD 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK-RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
+L+ WL + IP V TK DK K ++ RP + FF
Sbjct: 122 EELQLLDWLEELNIPTIPVITKVDKVTKNRRRAQIRPILEATGLPQEAFSFF-------- 173
Query: 283 TSSVTNQGRDEILLHM 298
S++T +GR++IL +
Sbjct: 174 -SALTREGREDILQRL 188
>gi|398817591|ref|ZP_10576206.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Brevibacillus
sp. BC25]
gi|398029712|gb|EJL23161.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Brevibacillus
sp. BC25]
Length = 214
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 104/193 (53%), Gaps = 11/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +EF+ S+V + P+DGL E ALVGRSNVGKSSLLN ++ RK LA S PGKTQ
Sbjct: 2 KVTSSEFIISAVGPKQYPTDGLHEIALVGRSNVGKSSLLNKMMNRKGLARISSRPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N+FR+N Y VD PGYGYA + ++ W K + Y NR L V L+D
Sbjct: 62 LNYFRVNQMLYFVDFPGYGYAKVAKTIKEQWGKMIEGYLKNREELRFVIQLVDIRHAPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+ W Q IP +V TK DK R + K ++LN + I
Sbjct: 122 DDVAMYDWCKQIGIPTVVVATKGDKIARGRWLQHTKIIRQSLN---------LRGDDTII 172
Query: 282 MTSSVTNQGRDEI 294
+ SS T QG+DE+
Sbjct: 173 VFSSETGQGKDEL 185
>gi|218781246|ref|YP_002432564.1| small GTP-binding protein [Desulfatibacillum alkenivorans AK-01]
gi|226741189|sp|B8FLF0.1|ENGB_DESAA RecName: Full=Probable GTP-binding protein EngB
gi|218762630|gb|ACL05096.1| small GTP-binding protein [Desulfatibacillum alkenivorans AK-01]
Length = 205
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 116/205 (56%), Gaps = 15/205 (7%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ A+F+ S+ + + P LPE A GRSNVGKSSL+NSL++RKKL TS TPG+TQ +
Sbjct: 3 IKSAKFMSSATKPGNYPPPELPEIAFAGRSNVGKSSLINSLLKRKKLVKTSSTPGRTQLL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F +N+S VDLPGYGYA +E+R W + + + R TL V L++D
Sbjct: 63 NFFEVNESLVFVDLPGYGYAKVSKEMRKKWGQMIETFITTRKTLHGVVLILDLRRIPGGQ 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPE--ENLNDFQELIQGFFQTAPPWIM 282
+ E +W N IP+ LV TK DK +++ ++ E + L ++I F
Sbjct: 123 ERENLAWFDLNNIPVILVATKADKFSRQRQLAQQKEMAKALGIPLDVIHVF--------- 173
Query: 283 TSSVTNQGRDEI---LLHMAQLRNY 304
S+ T QGRDE+ +L + ++ ++
Sbjct: 174 -SAKTGQGRDELWESILDLCEIDDF 197
>gi|310778381|ref|YP_003966714.1| ribosome biogenesis GTP-binding protein YsxC [Ilyobacter polytropus
DSM 2926]
gi|309747704|gb|ADO82366.1| ribosome biogenesis GTP-binding protein YsxC [Ilyobacter polytropus
DSM 2926]
Length = 196
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 99/147 (67%), Gaps = 4/147 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSD-GLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
+ QA++VKS+V +D P + EFA VGRSNVGKSSL+NS+ R+KLA TSKTPG+TQ
Sbjct: 2 NIKQADYVKSAVFEKDYPEEVASYEFAFVGRSNVGKSSLINSITGRRKLAKTSKTPGRTQ 61
Query: 163 CINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDA-SIPA 221
IN+F IN ++ VDLPGYG+A P+ ++ +W K T + +L + VF+L+D IP+
Sbjct: 62 LINYFIINKEFFFVDLPGYGFAKVPKIMKEEWGK-TMETYLASARQKLVFVLLDIRRIPS 120
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDK 248
+ D+ WL +IP ++FTK DK
Sbjct: 121 ED-DINMLKWLEHYEIPFKIIFTKVDK 146
>gi|302874449|ref|YP_003843082.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
cellulovorans 743B]
gi|307690944|ref|ZP_07633390.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
cellulovorans 743B]
gi|302577306|gb|ADL51318.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
cellulovorans 743B]
Length = 201
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 105/194 (54%), Gaps = 11/194 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ QAEFV S+V+T P D +PE A VGRSNVGKSSL+N+L RKKL S+TPGKT+
Sbjct: 2 EIKQAEFVTSAVKTSQYPQDDIPEVAFVGRSNVGKSSLINTLTNRKKLVKVSQTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N F IN+ + VDLPGYGYA + R W K + Y NR L V LL+D+
Sbjct: 62 VNFFIINNVMHFVDLPGYGYAKVSKNERDSWGKTIETYLHNRPQLKKVILLLDSRRVPNE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D+ W+ +V TK DK K + LN Q++I + M
Sbjct: 122 DDILMYDWILHYGYEAVIVLTKVDKLTKNE---------LNKNQKIIAEAIKLPKGAKMY 172
Query: 284 --SSVTNQGRDEIL 295
SS+ G++E+L
Sbjct: 173 KFSSLKKTGKEELL 186
>gi|188585731|ref|YP_001917276.1| GTP-binding protein HSR1-related [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|229813286|sp|B2A1E8.1|ENGB_NATTJ RecName: Full=Probable GTP-binding protein EngB
gi|179350418|gb|ACB84688.1| GTP-binding protein HSR1-related [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 193
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 108/191 (56%), Gaps = 7/191 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V AE++ S+ + PS+ PE + +GRSNVGKSSL+N+L+ RK LA TSK PGKT+
Sbjct: 2 KVTNAEYMASAYLSSQFPSEMYPEISFIGRSNVGKSSLINTLINRKNLAYTSKQPGKTRT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F IN S Y VDLPGYG+A + ++ DW++ Y R+TL L+ID K
Sbjct: 62 INFFLINKSLYFVDLPGYGFAKVSKTMQKDWEQLVNAYLSQRNTLKLSILIIDGRHGPKD 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D++ +L + P+ LV TK DK K K + E + EL Q I
Sbjct: 122 ADIDMFDYLLDFERPVLLVATKMDKVKANKRKQRITE--MRSALELDQD-----DELITF 174
Query: 284 SSVTNQGRDEI 294
SS T +G++E+
Sbjct: 175 SSATGEGKNEL 185
>gi|310829088|ref|YP_003961445.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium limosum
KIST612]
gi|308740822|gb|ADO38482.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium limosum
KIST612]
Length = 193
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 105/195 (53%), Gaps = 17/195 (8%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V QAE V S+V+ P D LPE L+GRSNVGKSS +N+L++RK LA TS PGKTQ
Sbjct: 2 KVTQAEIVISAVQQSQYPEDNLPEIVLLGRSNVGKSSFINTLIQRKGLARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N ++IND++Y VD+PGYGYA ++ R W ++Y R +V V LL+D+
Sbjct: 62 MNFYKINDAFYFVDMPGYGYAKVSKKEREKWGVMIEEYLQKRENMVLVLLLVDSRHEPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPP---- 279
D WL + ++ TK DK K + ++ + F T P
Sbjct: 122 DDRLMYDWLTYYGLDPVIIATKADKISKVRQ------------KKAVDNIFNTLRPRKRS 169
Query: 280 -WIMTSSVTNQGRDE 293
I+ S+ T G+DE
Sbjct: 170 DVILFSAATKMGKDE 184
>gi|295425158|ref|ZP_06817863.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
amylolyticus DSM 11664]
gi|295065217|gb|EFG56120.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
amylolyticus DSM 11664]
Length = 196
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 99/151 (65%), Gaps = 6/151 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +E+ S+VR + P D LPE AL GRSNVGKSSL+N+LV RK LA TS PGKTQ
Sbjct: 2 KINSSEYAVSAVREDQYPKDDLPEIALAGRSNVGKSSLINTLVNRKNLARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDA-SIPAK 222
+N + +N S+YLVD+PGYGYA ++ R ++ + +DY R+ L + +L+D+ +P+K
Sbjct: 62 LNFYLVNKSFYLVDVPGYGYAKVSQKKRQEFGEMIQDYLETRANLKGLIILVDSRHVPSK 121
Query: 223 PID--LEYASWLGQNQIPMTLVFTKCDKRKK 251
EYA +L +P+ +V TK DK KK
Sbjct: 122 DDQSMYEYAQYLN---LPILVVCTKIDKLKK 149
>gi|335041125|ref|ZP_08534241.1| GTP-binding protein engB [Caldalkalibacillus thermarum TA2.A1]
gi|334178923|gb|EGL81572.1| GTP-binding protein engB [Caldalkalibacillus thermarum TA2.A1]
Length = 213
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 108/193 (55%), Gaps = 11/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V QAE V S+V ++ P + LPE AL GRSNVGKSS +N ++ RK LA TS PGKTQ
Sbjct: 2 KVTQAELVISAVSSKQYPQEALPEIALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +RIN ++ VDLPGYGYA ++ R W +F ++Y R L + L+D I KP
Sbjct: 62 LNFYRINGQFFFVDLPGYGYARVSKKERERWGRFIEEYLTTRQQLQLICHLVD--IRHKP 119
Query: 224 I--DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D A WL +P ++ TK DK K K ++L +E +Q P I
Sbjct: 120 TRDDQMMADWLQAMALPRLVIATKADKISKGKIA-----KHLKLVKETLQ--LAKDVPLI 172
Query: 282 MTSSVTNQGRDEI 294
S+ T G++E+
Sbjct: 173 AFSAETGLGKEEV 185
>gi|312113265|ref|YP_004010861.1| ribosome biogenesis GTP-binding protein YsxC [Rhodomicrobium
vannielii ATCC 17100]
gi|311218394|gb|ADP69762.1| ribosome biogenesis GTP-binding protein YsxC [Rhodomicrobium
vannielii ATCC 17100]
Length = 214
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 105/196 (53%), Gaps = 5/196 (2%)
Query: 106 AQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCIN 165
A AEFV P PE A GRSNVGKSSLLN+L+ R+ LA S TPG+T+ +N
Sbjct: 23 APAEFVLGVTDVAALPEGNRPEVAFAGRSNVGKSSLLNALLSRRNLARVSNTPGRTREVN 82
Query: 166 HFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPID 225
+F + D+ Y+VD+PGYGYA AP+ L W + DY R L V LLID+ KP D
Sbjct: 83 YFSVGDALYVVDMPGYGYAKAPKALVKGWTQLIHDYLRGRPQLKRVMLLIDSRHGLKPSD 142
Query: 226 LEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSS 285
E + L + + V TK DK K G + + + + +++ P + TSS
Sbjct: 143 KEIMTLLDKAAVSYQGVLTKADKPKAGDLG-----QVVRETEAVMRTHPAAHPVVLTTSS 197
Query: 286 VTNQGRDEILLHMAQL 301
V G +E+ +A+L
Sbjct: 198 VDGAGIEELRTAIAEL 213
>gi|304311551|ref|YP_003811149.1| GTP-binding protein [gamma proteobacterium HdN1]
gi|301797284|emb|CBL45504.1| GTP-binding protein [gamma proteobacterium HdN1]
Length = 236
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 109 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFR 168
+F+ S+ + CP D E A GRSN GKSS +N + ++ KLA TSKTPG+TQ +N F
Sbjct: 42 QFLTSAAKLSQCPPDEGREVAFAGRSNAGKSSAINRITQQSKLARTSKTPGRTQLLNFFS 101
Query: 169 INDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEY 228
++D LVDLPGYGYA P L+ +W + +Y NR +LV V L++D P KP D
Sbjct: 102 VDDHKRLVDLPGYGYAEVPEALKVEWQRHLTEYLENRVSLVGVILIMDVRHPLKPFDQMM 161
Query: 229 ASWLGQNQIPMTLVFTKCDKRKKKKNGGKR 258
W Q P+ ++ TK DK +N G++
Sbjct: 162 LDWARAYQFPLHILLTKADKL--SRNAGQK 189
>gi|226311385|ref|YP_002771279.1| GTP-binding protein EngB [Brevibacillus brevis NBRC 100599]
gi|226094333|dbj|BAH42775.1| probable GTP-binding protein EngB [Brevibacillus brevis NBRC
100599]
Length = 215
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 105/193 (54%), Gaps = 11/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +EF+ S+V + P+DGL E ALVGRSNVGKSSLLN ++ RK LA S PGKTQ
Sbjct: 2 KVTSSEFIISAVGPKQYPTDGLHEIALVGRSNVGKSSLLNKMMNRKGLARISSRPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N+FR+N Y VD PGYGYA + ++ W K + Y NR+ L + L+D
Sbjct: 62 LNYFRVNQMLYFVDFPGYGYAKVAKTIKEQWGKMIEGYLKNRNELRFIIQLVDIRHAPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+ W Q +P +V TK DK R + K ++LN + I
Sbjct: 122 DDIAMYDWCKQIGLPTVVVATKGDKIARGRWLQHTKIIRQSLN---------LRGDDTII 172
Query: 282 MTSSVTNQGRDEI 294
+ SS T QG+DE+
Sbjct: 173 VFSSETGQGKDEL 185
>gi|326796700|ref|YP_004314520.1| GTP-binding protein engB [Marinomonas mediterranea MMB-1]
gi|326547464|gb|ADZ92684.1| GTP-binding protein engB [Marinomonas mediterranea MMB-1]
Length = 212
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Query: 102 DAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
D+ A F+KS+ + CP D E A GRSN GKS+ LN+L ++KLA TSKTPG+T
Sbjct: 5 DSVFQSAHFIKSAEKLSQCPVDQGLEVAFAGRSNAGKSTALNTLTNQRKLARTSKTPGRT 64
Query: 162 QCINHFRIN-DSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIP 220
Q IN F +N + L+DLPGYG+A P ++ +W K +DY +NR +LV V L++D P
Sbjct: 65 QLINCFGMNVEDRRLIDLPGYGFAKVPVAMKINWQKHMQDYLMNRRSLVGVVLVMDVRHP 124
Query: 221 AKPIDLEYASWLGQNQIPMTLVFTKCDKRKK 251
K D+ W N++ + ++ TK DK K+
Sbjct: 125 LKEFDVMMLDWAKSNKVQVHVLLTKSDKLKR 155
>gi|194334829|ref|YP_002016689.1| ribosome biogenesis GTP-binding protein YsxC [Prosthecochloris
aestuarii DSM 271]
gi|238693315|sp|B4S596.1|ENGB_PROA2 RecName: Full=Probable GTP-binding protein EngB
gi|194312647|gb|ACF47042.1| small GTP-binding protein [Prosthecochloris aestuarii DSM 271]
Length = 192
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 107/201 (53%), Gaps = 12/201 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A F KS + P LPE VGRSNVGKS+LLN+L RK LA TS TPGKTQ
Sbjct: 2 KIDSATFYKSCSELKGLPVSSLPEIVFVGRSNVGKSTLLNTLTGRKALAKTSSTPGKTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN+F IND Y VDLPGYGYA + R +W + Y R + V LLID+ P
Sbjct: 62 INYFTINDRLYFVDLPGYGYAKVAKGQRYEWGRLLGGYISEREEISLVVLLIDSRHPDME 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D + +L Q P +V TK DK K+K+ + ++ ++ F +
Sbjct: 122 SDQQMIEFLEYYQRPYGIVLTKYDKLKQKEK---------SRVRKALKSFSLKTKFIVNY 172
Query: 284 SSVTNQGRDEILLHMAQLRNY 304
S+++ +G++ +L QL NY
Sbjct: 173 SALSGEGKESLL---EQLENY 190
>gi|170016866|ref|YP_001727785.1| ribosome biogenesis GTP-binding protein YsxC [Leuconostoc citreum
KM20]
gi|414597013|ref|ZP_11446584.1| Probable GTP-binding protein EngB [Leuconostoc citreum LBAE E16]
gi|421876598|ref|ZP_16308154.1| Probable GTP-binding protein EngB [Leuconostoc citreum LBAE C10]
gi|421878287|ref|ZP_16309769.1| Probable GTP-binding protein EngB [Leuconostoc citreum LBAE C11]
gi|238688953|sp|B1MXT9.1|ENGB_LEUCK RecName: Full=Probable GTP-binding protein EngB
gi|169803723|gb|ACA82341.1| Predicted GTPase [Leuconostoc citreum KM20]
gi|372557675|emb|CCF24274.1| Probable GTP-binding protein EngB [Leuconostoc citreum LBAE C10]
gi|390447901|emb|CCF25889.1| Probable GTP-binding protein EngB [Leuconostoc citreum LBAE C11]
gi|390482127|emb|CCF28645.1| Probable GTP-binding protein EngB [Leuconostoc citreum LBAE E16]
Length = 194
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 103/193 (53%), Gaps = 12/193 (6%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V E V S+V P+DG PE ALVGRSNVGKSSL N+L++RK A TS PGKTQ +
Sbjct: 3 VNNVEMVMSAVSAAQYPTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + + + Y VD+PGYGYA ++ R + ++Y +R L V L+DA
Sbjct: 63 NFYDVENQLYFVDVPGYGYAKVSKKQREAFGNMIEEYITSRKQLRGVISLVDARHDPSED 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQ---GFFQTAPPWI 281
D+ WL IP+ +V TK DK K K N ++ I+ GF +A ++
Sbjct: 123 DVAMYEWLHYYNIPILVVATKSDKISKSK---------FNKYENNIKKQLGFDSSASDFL 173
Query: 282 MTSSVTNQGRDEI 294
SS T GRD +
Sbjct: 174 FFSSETKYGRDSV 186
>gi|421858709|ref|ZP_16290972.1| predicted GTPase [Paenibacillus popilliae ATCC 14706]
gi|410831778|dbj|GAC41409.1| predicted GTPase [Paenibacillus popilliae ATCC 14706]
Length = 207
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 106/191 (55%), Gaps = 7/191 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEF+ S+V P DGLPE L GRSNVGKSSL+N ++ RK LA TS PGKTQ
Sbjct: 2 KITNAEFIISAVGPAQYPDDGLPEIGLAGRSNVGKSSLINKMMMRKNLARTSSQPGKTQQ 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N++RIND+ Y VD+PGYGYA + R W K + YF R L V L++D P
Sbjct: 62 LNYYRINDNMYFVDVPGYGYAKVSKVQRAAWGKMIEAYFRERDALRLVLLVVDLRHPPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D WL ++P+ +V TK DK K R ++L + + P ++
Sbjct: 122 DDCMMHQWLTHYEVPVAVVATKADKVPK-----SRWPKHLKQVRTTLD--LHADNPLVLF 174
Query: 284 SSVTNQGRDEI 294
S+ T QGR E+
Sbjct: 175 SAETGQGRQEL 185
>gi|119383630|ref|YP_914686.1| ribosome biogenesis GTP-binding protein YsxC [Paracoccus
denitrificans PD1222]
gi|119373397|gb|ABL68990.1| small GTP-binding protein [Paracoccus denitrificans PD1222]
Length = 216
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 96/182 (52%), Gaps = 5/182 (2%)
Query: 109 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFR 168
+F+K V + P PE GRSN GKSSL+N+L RK LA S TPG+TQ IN+F
Sbjct: 28 DFLKGVVAMDGLPPADRPEVCFAGRSNAGKSSLINALTGRKSLARASNTPGRTQEINYFT 87
Query: 169 INDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEY 228
+ + YLVDLPGYG+A AP + W K+Y R TL F LID+ K +D E
Sbjct: 88 LGERAYLVDLPGYGFAKAPVAVVAKWQALLKNYLSGRPTLRRAFTLIDSRHGVKDVDHEI 147
Query: 229 ASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTN 288
L ++ +P +V TK D K G + E + QE +Q P ++TSS
Sbjct: 148 MKLLDRSAVPFQVVLTKAD-----KIGAQAMEATVAQVQEALQKHPAAYPELVITSSEKG 202
Query: 289 QG 290
QG
Sbjct: 203 QG 204
>gi|399888208|ref|ZP_10774085.1| GTP-binding protein YsxC [Clostridium arbusti SL206]
Length = 198
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 108/194 (55%), Gaps = 11/194 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ QAEF+ S+V+ E P GLPE A VGRSNVGKSS++N++ RKKL S TPGKT+
Sbjct: 2 EIKQAEFIISAVKREQFPDTGLPEVAFVGRSNVGKSSIINAITNRKKLVKVSGTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F IN++ Y VDLPGYGYA +E + +W K + Y +R+ L V LL+D
Sbjct: 62 INFFLINNNSYFVDLPGYGYAKISKEQKKEWGKMMEIYLQDRNELKKVVLLLDCRRVPNE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK--NGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+ +W+ +V TK DK K + K + LN Q+ F+
Sbjct: 122 DDILMYNWITHYGYNCMIVATKSDKLNKSELVRSEKTIKHTLNLNQDEKISFY------- 174
Query: 282 MTSSVTNQGRDEIL 295
SS+ GR+E+L
Sbjct: 175 --SSLKKVGREELL 186
>gi|88658079|ref|YP_507406.1| GTPase EngB [Ehrlichia chaffeensis str. Arkansas]
gi|119369195|sp|Q2GGM7.1|ENGB_EHRCR RecName: Full=Probable GTP-binding protein EngB
gi|88599536|gb|ABD45005.1| GTP-binding protein EngB [Ehrlichia chaffeensis str. Arkansas]
Length = 200
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 112/197 (56%), Gaps = 8/197 (4%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+++ EF+ + + P +PE A+ GRSNVGKSSL+N++ KK A TS PG T+ I
Sbjct: 7 MSKCEFMIGATHIKSLPDFSIPEIAIAGRSNVGKSSLINAITNNKKNAKTSSKPGCTKQI 66
Query: 165 NHFRIN-DSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
N + IN D LVDLPGYGY+ A + ++ + Y LN L+ V LLIDA + K
Sbjct: 67 NFYLINKDFMVLVDLPGYGYSKADKTTINNYLCLMEYYLLNSRNLLKVILLIDAKVGFKE 126
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDL++ +WL +QI LV TK DK KK + + N+N + L F P I T
Sbjct: 127 IDLDFINWLELHQIHYQLVLTKIDKIKK-----EMLDVNVNYIKNLNLDFIMY--PIIST 179
Query: 284 SSVTNQGRDEILLHMAQ 300
SS QG +E++ +AQ
Sbjct: 180 SSQCKQGIEELIYEIAQ 196
>gi|301057780|ref|ZP_07198849.1| ribosome biogenesis GTP-binding protein YsxC [delta proteobacterium
NaphS2]
gi|300448091|gb|EFK11787.1| ribosome biogenesis GTP-binding protein YsxC [delta proteobacterium
NaphS2]
Length = 198
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 109/186 (58%), Gaps = 7/186 (3%)
Query: 109 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFR 168
EF+KS+ + E P PE A G+SNVGKSSL+N+L R+KLA TS TPG+TQ IN FR
Sbjct: 4 EFIKSAFKEEHYPPSDRPEVAFAGKSNVGKSSLINTLTGRRKLARTSSTPGRTQAINFFR 63
Query: 169 INDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEY 228
+ YLVDLPGYG+A P +++ W +DY +R TL +V +++D D +
Sbjct: 64 FGKTLYLVDLPGYGFARVPMKVKKSWGLMVEDYLRSRQTLKAVVVILDIRRDPSAGDADL 123
Query: 229 ASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTN 288
+WL I +V TK DK +++ GKR ++ ++G +AP ++ SS T
Sbjct: 124 INWLNYYHIVPIVVLTKADKVSRQQ-AGKRTAR----IKKSLKGVSFSAP--VLFSSHTR 176
Query: 289 QGRDEI 294
QG +++
Sbjct: 177 QGVEDL 182
>gi|110802133|ref|YP_698700.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
perfringens SM101]
gi|119369186|sp|Q0ST57.1|ENGB_CLOPS RecName: Full=Probable GTP-binding protein EngB
gi|110682634|gb|ABG86004.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
perfringens SM101]
Length = 197
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 110/197 (55%), Gaps = 11/197 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +EF+ S+V+ E P D LPE A VGRSNVGKSS++NSL R+ LA S+TPGKT+
Sbjct: 2 KIKSSEFIISAVKREQYPDDNLPEIAFVGRSNVGKSSIINSLTNRRGLAKVSQTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F +N +YLVDLPGYGYA ++ + W + Y LNR L V LL+D
Sbjct: 62 INFFLLNKDFYLVDLPGYGYAKVSKKEKASWGATIERYLLNRGPLKKVVLLVDCRHKPTA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGG--KRPEENLNDFQELIQGFFQTAPPWI 281
D++ W+ + ++ TK DK + G K +E L ++ FF
Sbjct: 122 DDVQMYEWIKHYGYEVVVIATKSDKISNNQIGKSEKLIKETLGLPKDYKLKFF------- 174
Query: 282 MTSSVTNQGRDEILLHM 298
SS+ +G+DE++ ++
Sbjct: 175 --SSLNKKGKDELVDYL 189
>gi|262039420|ref|ZP_06012727.1| ribosome biogenesis GTP-binding protein YsxC [Leptotrichia
goodfellowii F0264]
gi|261746556|gb|EEY34088.1| ribosome biogenesis GTP-binding protein YsxC [Leptotrichia
goodfellowii F0264]
Length = 198
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 114/204 (55%), Gaps = 12/204 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ ++EFVKS+V +D P EF+ +GRSNVGKSSL+NSL R+ LA TSKTPG+TQ
Sbjct: 2 EIKKSEFVKSAVYEKDYPEKKGIEFSFIGRSNVGKSSLINSLTNRRNLARTSKTPGRTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLID-ASIPAK 222
IN+F I+ Y VDLPGYG+A P ++ +W + Y + V VFLL+D IP+
Sbjct: 62 INYFLIDSEIYFVDLPGYGFAKVPEAVKRNWGTTIETYLKSERDKV-VFLLLDLRRIPSG 120
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D+E WL I ++FTK DK E +E+ +
Sbjct: 121 E-DMEMLRWLEHYNIEYYIIFTKSDKLSN--------NEKAKQLKEIKKKLEFNNEDVFF 171
Query: 283 TSSVTNQGRDEIL-LHMAQLRNYW 305
+S++ N G++E+L +++NY+
Sbjct: 172 SSALKNTGKEELLDFIYEKVKNYY 195
>gi|399050838|ref|ZP_10740882.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Brevibacillus
sp. CF112]
gi|433542104|ref|ZP_20498538.1| GTP-binding protein EngB [Brevibacillus agri BAB-2500]
gi|398051554|gb|EJL43876.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Brevibacillus
sp. CF112]
gi|432186619|gb|ELK44086.1| GTP-binding protein EngB [Brevibacillus agri BAB-2500]
Length = 222
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 101/193 (52%), Gaps = 11/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V AEFV S+V + P DGL E ALVGRSNVGKSSLLN ++ RK LA S PGKTQ
Sbjct: 2 KVTSAEFVISAVGPKQYPEDGLHEIALVGRSNVGKSSLLNKMMNRKGLARISSRPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N+FR+N Y VD PGYGYA + ++ W K + Y R L V L+D
Sbjct: 62 LNYFRVNQMLYFVDFPGYGYAKVAKTIKEQWGKMIEGYLKKRKELRFVIQLVDIRHAPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+ W Q IP +V TK DK R + K + LN + I
Sbjct: 122 DDVAMYEWCKQIGIPTVVVATKGDKIARGRWLQHTKIIRQTLN---------MRGDDTII 172
Query: 282 MTSSVTNQGRDEI 294
+ SS T QG+DE+
Sbjct: 173 VFSSETGQGKDEL 185
>gi|326693799|ref|ZP_08230804.1| GTP-binding protein YsxC [Leuconostoc argentinum KCTC 3773]
Length = 196
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 103/193 (53%), Gaps = 12/193 (6%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V E V S+V P+DG PE ALVGRSNVGKSSL N+L++RK A TS PGKTQ +
Sbjct: 3 VHNVEMVMSAVSAAQYPTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + + D Y VD+PGYGYA ++ R + + ++Y +R L V L+DA
Sbjct: 63 NFYNVEDQLYFVDVPGYGYAKVSKKQREAFGQMIEEYITSRKQLRGVISLVDARHDPSAD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQ---GFFQTAPPWI 281
D+ WL IP+ +V TK DK K K N ++ I+ GF ++
Sbjct: 123 DIAMYEWLHYYNIPILVVATKADKISKSK---------FNKYEANIKRTLGFDDEDSDFL 173
Query: 282 MTSSVTNQGRDEI 294
SS T G+D++
Sbjct: 174 FFSSETKYGKDQV 186
>gi|342217774|ref|ZP_08710412.1| ribosome biogenesis GTP-binding protein YsxC [Megasphaera sp. UPII
135-E]
gi|341592761|gb|EGS35621.1| ribosome biogenesis GTP-binding protein YsxC [Megasphaera sp. UPII
135-E]
Length = 204
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 114/201 (56%), Gaps = 18/201 (8%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A + ++V+ E P++ LPE A +GRSNVGKSSL+NSL K LA S PGKTQ
Sbjct: 5 EIINARYTATAVKKEQYPAEQLPEIAFLGRSNVGKSSLINSLCNYKGLARVSGAPGKTQT 64
Query: 164 INHFR---------INDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLL 214
IN++R + +YLVDLPGYGYA + R W F ++Y +L + LL
Sbjct: 65 INYYRAELRAVGEEVRHPFYLVDLPGYGYAKTGIKQREMWSHFIREYVQTSPSLRLLCLL 124
Query: 215 IDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFF 274
+D+ P ID++ WL + + + L+ TK DK K K+ ++N++ ++E+ F
Sbjct: 125 VDSRHPGLEIDIQAYEWLITSSVKVQLIATKADKLKAKER-----QKNMSLYKEI---FS 176
Query: 275 QTAPPWIMTSSVTNQGRDEIL 295
QT P I+ SS+ QG +L
Sbjct: 177 QTETP-ILYSSLKRQGSQLVL 196
>gi|340385210|ref|XP_003391103.1| PREDICTED: probable GTP-binding protein EngB-like [Amphimedon
queenslandica]
Length = 215
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 115/216 (53%), Gaps = 22/216 (10%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA F+ S+ R D P+D E A GRSN GKSSL+N+L RRK LA TS+TPG+T+ IN
Sbjct: 6 QATFLVSASRVRDFPADEGLEVAFAGRSNAGKSSLINALCRRKALARTSRTPGRTRLINF 65
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + DS LVDLPGYGYA APR + W + ++Y R +L + LL+D P +D
Sbjct: 66 FSVADSLRLVDLPGYGYAKAPRSMSEAWGRLVEEYLQGRRSLAGLVLLMDIRHPLTALDR 125
Query: 227 EYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDF------------QELIQG 272
+ IP+ +V +K DK K++ K L D + +G
Sbjct: 126 IMLNGCRLGGIPLLVVLSKADKLASKRRIMAIKEVRSALGDLFAQDSAKERAVPDAMGEG 185
Query: 273 FFQTAPPWIMTSSVTNQ-GRDEILLHMAQLRNYWLK 307
+PP +M S+ + G +E++LH++ WL+
Sbjct: 186 ---RSPPKVMAHSLPAKIGYEELVLHLSA----WLE 214
>gi|410662249|ref|YP_006914620.1| GTP-binding protein EngB [Dehalobacter sp. CF]
gi|409024605|gb|AFV06635.1| GTP-binding protein EngB [Dehalobacter sp. CF]
Length = 195
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 85/148 (57%), Gaps = 4/148 (2%)
Query: 113 SSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDS 172
S+V+ + P PE A+ GRSNVGKSSL+N LV RK LA KTPGKTQ IN F IND
Sbjct: 3 SAVKPQQYPEGTRPELAVSGRSNVGKSSLINKLVNRKGLAKVGKTPGKTQTINFFNINDE 62
Query: 173 WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWL 232
WYLVDLPGYGYA +E R W K + YF R L V L+D D L
Sbjct: 63 WYLVDLPGYGYAKVSQETRMQWGKMMQTYFRLRENLKGVIQLVDIRHQPTEEDRMMLEML 122
Query: 233 GQNQIPMTLVFTKCDKRKKKKNGGKRPE 260
N IP+ +V TK DK + G+RP+
Sbjct: 123 KVNNIPVLVVATKADKIAR----GQRPK 146
>gi|375088365|ref|ZP_09734705.1| ribosome biogenesis GTP-binding protein YsxC [Dolosigranulum pigrum
ATCC 51524]
gi|374562403|gb|EHR33733.1| ribosome biogenesis GTP-binding protein YsxC [Dolosigranulum pigrum
ATCC 51524]
Length = 197
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 91/151 (60%)
Query: 103 AQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
QV A+ + S+VR E P +GLPE AL GRSNVGKSS +N+++ RKKLA TS PGKT+
Sbjct: 2 VQVNYADILISAVRPEQYPDEGLPEIALAGRSNVGKSSFINTMINRKKLARTSSKPGKTR 61
Query: 163 CINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAK 222
+N F IN + VD+PGYGYA + R W + +DYF R L V ++D
Sbjct: 62 TLNFFNINHDFLFVDVPGYGYAKVSKSEREKWSQMMEDYFSAREELSLVVQIVDFRHEPT 121
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
+D++ +L +P+ +V TK DK KK +
Sbjct: 122 ELDIQMYEYLKYFDLPVLIVATKADKIKKSR 152
>gi|297583716|ref|YP_003699496.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
selenitireducens MLS10]
gi|297142173|gb|ADH98930.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
selenitireducens MLS10]
Length = 212
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 108/200 (54%), Gaps = 11/200 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V QAE V S+ + + P +PE AL GRSNVGKSS +N+L+ RK LA TS+ PGKTQ
Sbjct: 2 KVNQAELVISAAKQDQFPGTMIPEVALSGRSNVGKSSFINTLINRKGLARTSQRPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IND ++ VD+PGYGYA + R W K + YF +R L V LID+
Sbjct: 62 LNFYIINDRFHFVDVPGYGYAKVSKAERAAWGKTLELYFSSREQLNGVVQLIDSRHKPSE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+ WL + + L+ TKCDK R K K+ +LN + P I
Sbjct: 122 DDILMYDWLKHHGHKVVLIATKCDKIPRGKWAKSKKQISGDLNR---------DPSDPLI 172
Query: 282 MTSSVTNQGRDEILLHMAQL 301
M SS T QG++E + L
Sbjct: 173 MFSSETGQGKEEAWREIKDL 192
>gi|222053643|ref|YP_002536005.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter daltonii
FRC-32]
gi|254783197|sp|B9LZU0.1|ENGB_GEOSF RecName: Full=Probable GTP-binding protein EngB
gi|221562932|gb|ACM18904.1| small GTP-binding protein domain protein [Geobacter daltonii
FRC-32]
Length = 207
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 85/151 (56%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ EF+KS+ R P LPE A GRSNVGKSSL+N LV RK L TS TPG+TQ I
Sbjct: 3 IKYVEFIKSATRAAHYPPGDLPEIAFAGRSNVGKSSLINVLVNRKSLVRTSSTPGRTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F +N + LVDLPGYG+A P ++ W ++Y R+ L V L++D
Sbjct: 63 NFFDVNGQFTLVDLPGYGFAKVPLAVKKQWGPMMENYLAKRANLRGVILILDIRRTPVAE 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNG 255
D++ WL I LV TKCDK K + G
Sbjct: 123 DIQMLHWLQAYSIKPILVITKCDKVSKNERG 153
>gi|238855231|ref|ZP_04645550.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
jensenii 269-3]
gi|260664592|ref|ZP_05865444.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
jensenii SJ-7A-US]
gi|313471946|ref|ZP_07812438.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
jensenii 1153]
gi|238832123|gb|EEQ24441.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
jensenii 269-3]
gi|239529126|gb|EEQ68127.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
jensenii 1153]
gi|260561657|gb|EEX27629.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
jensenii SJ-7A-US]
Length = 195
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 95/150 (63%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +E+ S+VR + P D LPE AL GRSNVGKSSL+NS + RK LA TS PGKTQ
Sbjct: 2 KITSSEYSVSAVREDQYPRDVLPEIALAGRSNVGKSSLINSFLNRKNLARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +++NDS+YLVD+PGYGYA ++ R + + +DY R+ L + ++IDA
Sbjct: 62 LNFYKVNDSFYLVDVPGYGYAKVSKKQREQFGEMIQDYLETRANLEGLIIIIDARHEPTT 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D+ ++ +P+ +V TK DK KK +
Sbjct: 122 DDIAMYNYALLLDLPILVVTTKMDKLKKSQ 151
>gi|261749612|ref|YP_003257298.1| EngB GTP-binding protein [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497705|gb|ACX84155.1| putative EngB GTP-binding protein [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 206
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 114/205 (55%), Gaps = 5/205 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +F S +++ PE+A +GRSNVGKSSL+N + R+KLA S TPG+T+
Sbjct: 2 KITSVKFEGSKIQSNQLFLSNFPEYAFIGRSNVGKSSLINWITNRRKLAKVSSTPGRTKF 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N F IN WYL+DLPGYGY++ ++ + K DY R LV++FLLID+ I +
Sbjct: 62 VNPFLINHKWYLIDLPGYGYSSICQKKKEKTQKLMMDYIFYRKNLVNLFLLIDSRIFLQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D+ + L QIP +VFTK DK + +N++ ++ I+ + P +
Sbjct: 122 SDIHFIKKLKIFQIPFCIVFTKTDKI-----HPRFLNKNIDFCKKEIEKILFSMPKYFKV 176
Query: 284 SSVTNQGRDEILLHMAQLRNYWLKH 308
S GR++I+ ++ + + K+
Sbjct: 177 SIKNRSGREKIIQYIQNINEIFQKN 201
>gi|339448217|ref|ZP_08651773.1| GTP-binding protein YsxC [Lactobacillus fructivorans KCTC 3543]
Length = 195
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 100/190 (52%), Gaps = 7/190 (3%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V E V S+V + PS G PE +GRSNVGKSSL N L+ RK A TS PGKTQ +
Sbjct: 3 VNDVELVMSAVDPKQYPSTGYPEIGFLGRSNVGKSSLTNVLINRKDYAHTSGQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N +R+ND++Y VD+PGYGYA + R W + + Y R L V LID
Sbjct: 63 NFYRVNDAFYFVDVPGYGYAKVSKSEREKWAQMIETYLTQREQLRGVVNLIDGRHAPSDY 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D++ WL IP+ V TK DK K K K+ E+ L EL + P +M S
Sbjct: 123 DIQMRDWLDYYGIPVLYVATKVDKIPKSKR--KKQEQILRKGLEL-----EDDEPLVMFS 175
Query: 285 SVTNQGRDEI 294
+ T G D++
Sbjct: 176 AKTKVGADQV 185
>gi|73667065|ref|YP_303081.1| ribosome biogenesis GTP-binding protein YsxC [Ehrlichia canis str.
Jake]
gi|119369194|sp|Q3YS22.1|ENGB_EHRCJ RecName: Full=Probable GTP-binding protein EngB
gi|72394206|gb|AAZ68483.1| GTP-binding domain [Ehrlichia canis str. Jake]
Length = 200
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 111/199 (55%), Gaps = 8/199 (4%)
Query: 103 AQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
A +++ EF+ + + P+ +PE A+ GRSNVGKSSL+N++ KK A TS PG T+
Sbjct: 5 AIMSKCEFIIGATHVKSFPNFSIPEIAIAGRSNVGKSSLINAITNNKKNAKTSSRPGCTK 64
Query: 163 CINHFRINDSWY-LVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
IN + IN S+ LVDLPGYGY+ A R ++ + Y LN L+ V LLID +
Sbjct: 65 QINFYLINKSFMVLVDLPGYGYSKATRATINNYLFLMEYYLLNSKNLLKVILLIDVKVGF 124
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
K IDL++ +WL N I LV TK D+ K + + N+N + L GF P I
Sbjct: 125 KEIDLDFINWLELNHIYYQLVLTKIDRVSK-----EILDVNINYIKNLNLGF--VIYPVI 177
Query: 282 MTSSVTNQGRDEILLHMAQ 300
SS QG E++ +AQ
Sbjct: 178 SASSKYKQGIGELIYEIAQ 196
>gi|188996268|ref|YP_001930519.1| small GTP-binding protein [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931335|gb|ACD65965.1| small GTP-binding protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 197
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 91/146 (62%), Gaps = 1/146 (0%)
Query: 103 AQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
+ + +FVKS+V+ ED P PE A+VGRSNVGKSSL+N++ +R +A S TPGKT+
Sbjct: 2 SSLKSVKFVKSAVKPEDFPPPDKPEIAIVGRSNVGKSSLINAIFKRS-IAKVSATPGKTK 60
Query: 163 CINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAK 222
IN F +ND Y VDLPGYG+AA + + +W + +DY LNR L + +L+D P
Sbjct: 61 LINFFLLNDDIYFVDLPGYGFAAVSHKEKQNWKRMIEDYLLNRENLNLIIMLVDTRYPPT 120
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDK 248
+D+ WL + P +V TK DK
Sbjct: 121 NLDILMKEWLESFEKPYIVVGTKIDK 146
>gi|389843642|ref|YP_006345722.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Mesotoga prima
MesG1.Ag.4.2]
gi|387858388|gb|AFK06479.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Mesotoga prima
MesG1.Ag.4.2]
Length = 190
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 104/194 (53%), Gaps = 7/194 (3%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V E V++ + P E A GRSNVGKSSLLNSL RK LA TS TPGKT+ I
Sbjct: 3 VKSTELVRTVFSKGEYPPPLRREIAFAGRSNVGKSSLLNSLFGRK-LAKTSSTPGKTRSI 61
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + +N Y VDLPGYGYA A R W K DYF +R L V +L+D P +P
Sbjct: 62 NFYGVNREIYFVDLPGYGYAKASMSEREKWKKLIIDYFESREELSLVVVLVDIRHPLQPA 121
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D++ W+ IP LV TK DK +N E+++ D EL PP + S
Sbjct: 122 DIQMLEWVTYYTIPFILVLTKADKL--SRNQQIIAEKSIKD--ELAS--LGVYPPVFVVS 175
Query: 285 SVTNQGRDEILLHM 298
+V QG +E+L+ +
Sbjct: 176 AVKKQGIEELLIAL 189
>gi|406990624|gb|EKE10262.1| ribosome biogenesis GTP-binding protein YsxC [uncultured bacterium]
Length = 214
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 105/192 (54%), Gaps = 5/192 (2%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
F+ S + D P L E A G SNVGKSSL+N+L RK LA S TPG+TQC+N FR+
Sbjct: 22 FITSVAKLSDLPEPALSEIAFAGHSNVGKSSLINALFGRKSLARVSHTPGRTQCLNFFRL 81
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
+Y+VD+PGYGYAA + W + DY R +L VFLLID+ K DL
Sbjct: 82 GKYFYIVDMPGYGYAAVSKSKIKVWTQLIHDYLKGRVSLKRVFLLIDSRHGLKTSDLAVM 141
Query: 230 SWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQ 289
L + + +V TK DK ++ K+ +NL +E ++ P ++TS+ Q
Sbjct: 142 KALDKAAVSYQIVLTKADKSTQEHL--KKLTQNL---KEALKKHPAAFPELLLTSAQKGQ 196
Query: 290 GRDEILLHMAQL 301
G DE+ +A+L
Sbjct: 197 GLDELRETIAEL 208
>gi|237755489|ref|ZP_04584111.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237692353|gb|EEP61339.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 197
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 90/146 (61%), Gaps = 1/146 (0%)
Query: 103 AQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
+ +FVKS+V+ ED P PE A+VGRSNVGKSSL+N++ +R +A S TPGKT+
Sbjct: 2 GSLKSVKFVKSAVKPEDFPPPNKPEIAIVGRSNVGKSSLINAIFKRS-IAKVSATPGKTR 60
Query: 163 CINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAK 222
IN F +ND Y VDLPGYG+AA + + +W + +DY LNR L + +L+D P
Sbjct: 61 LINFFLLNDDIYFVDLPGYGFAAVSHKEKQNWKRMIEDYLLNRENLNLIIMLVDTRYPPT 120
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDK 248
+D+ WL + P +V TK DK
Sbjct: 121 NLDVLMKEWLESFEKPYIVVGTKIDK 146
>gi|15895894|ref|NP_349243.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
acetobutylicum ATCC 824]
gi|337737847|ref|YP_004637294.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
acetobutylicum DSM 1731]
gi|384459357|ref|YP_005671777.1| GTPase EngB [Clostridium acetobutylicum EA 2018]
gi|24418388|sp|Q97FU0.1|ENGB_CLOAB RecName: Full=Probable GTP-binding protein EngB
gi|15025663|gb|AAK80583.1|AE007761_2 Predicted GTPase, YSXC B.subtilis ortholog [Clostridium
acetobutylicum ATCC 824]
gi|325510046|gb|ADZ21682.1| GTPase EngB [Clostridium acetobutylicum EA 2018]
gi|336293511|gb|AEI34645.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
acetobutylicum DSM 1731]
Length = 200
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 110/200 (55%), Gaps = 7/200 (3%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ QAEF+ S+ + P DG E A VGRSNVGKSSL+N++ R+KL S TPGKT+ +
Sbjct: 3 IKQAEFIISAAWKKQFPIDGKDEIAFVGRSNVGKSSLINAITNRRKLVKVSGTPGKTRLV 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F IN+ +Y VDLPGYGYA ++ W + + Y + R L V LL+D+
Sbjct: 63 NFFMINNDFYFVDLPGYGYAKVSKKELEKWSQTIEGYLVGREQLKKVILLVDSRHKPTKD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D+ +W+ ++ TK DK K+ + K E L +E ++ F + + S
Sbjct: 123 DITMYNWIKYYDYKCIVIATKSDKIKRSE---KVKNEKL--IKETLK--FNDSDEFYFFS 175
Query: 285 SVTNQGRDEILLHMAQLRNY 304
S T QGRDE++ ++ NY
Sbjct: 176 SATKQGRDELINNICSGINY 195
>gi|18310371|ref|NP_562305.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
perfringens str. 13]
gi|110800363|ref|YP_696084.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
perfringens ATCC 13124]
gi|168207810|ref|ZP_02633815.1| GTP-binding protein [Clostridium perfringens E str. JGS1987]
gi|168215329|ref|ZP_02640954.1| GTP-binding protein [Clostridium perfringens CPE str. F4969]
gi|168217820|ref|ZP_02643445.1| GTP-binding protein [Clostridium perfringens NCTC 8239]
gi|169342290|ref|ZP_02863368.1| GTP-binding protein [Clostridium perfringens C str. JGS1495]
gi|422346055|ref|ZP_16426969.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
perfringens WAL-14572]
gi|422874313|ref|ZP_16920798.1| GTP-binding protein YsxC [Clostridium perfringens F262]
gi|24418379|sp|Q8XKK5.1|ENGB_CLOPE RecName: Full=Probable GTP-binding protein EngB
gi|119369185|sp|Q0TQK6.1|ENGB_CLOP1 RecName: Full=Probable GTP-binding protein EngB
gi|18145051|dbj|BAB81095.1| probable GTP binding protein [Clostridium perfringens str. 13]
gi|110675010|gb|ABG83997.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
perfringens ATCC 13124]
gi|169299617|gb|EDS81676.1| GTP-binding protein [Clostridium perfringens C str. JGS1495]
gi|170660856|gb|EDT13539.1| GTP-binding protein [Clostridium perfringens E str. JGS1987]
gi|170713286|gb|EDT25468.1| GTP-binding protein [Clostridium perfringens CPE str. F4969]
gi|182380168|gb|EDT77647.1| GTP-binding protein [Clostridium perfringens NCTC 8239]
gi|373226677|gb|EHP48999.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
perfringens WAL-14572]
gi|380304790|gb|EIA17076.1| GTP-binding protein YsxC [Clostridium perfringens F262]
Length = 197
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 110/197 (55%), Gaps = 11/197 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +EF+ S+V+ E P D LPE A VGRSNVGKSS++NSL R+ LA S+TPGKT+
Sbjct: 2 KIKSSEFIISAVKREQYPDDNLPEIAFVGRSNVGKSSIINSLTNRRGLAKVSQTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F +N +YLVDLPGYGYA ++ + W + Y LNR L V LL+D
Sbjct: 62 INFFLLNKDFYLVDLPGYGYAKVSKKEKASWGATIERYLLNRGPLKKVVLLVDCRHKPTA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGG--KRPEENLNDFQELIQGFFQTAPPWI 281
D++ W+ + ++ TK DK + G K +E L ++ FF
Sbjct: 122 DDVQMYEWIKHYGYEVVVIATKSDKISNNQIGKSEKLIKETLGLPKDHKLKFF------- 174
Query: 282 MTSSVTNQGRDEILLHM 298
SS+ +G+DE++ ++
Sbjct: 175 --SSLNKKGKDELVDYL 189
>gi|332686390|ref|YP_004456164.1| GTP-binding protein EngB [Melissococcus plutonius ATCC 35311]
gi|379727581|ref|YP_005319766.1| GTP-binding protein EngB [Melissococcus plutonius DAT561]
gi|332370399|dbj|BAK21355.1| GTP-binding protein EngB [Melissococcus plutonius ATCC 35311]
gi|376318484|dbj|BAL62271.1| GTP-binding protein EngB [Melissococcus plutonius DAT561]
Length = 193
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V AE V S+V P LPE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ
Sbjct: 2 KVHNAEIVISAVSPLQYPERELPEIALAGRSNVGKSSFINTLINRKNLARTSGKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + I DS Y VD+PGYGYA + R W K + Y +R+ L +V L+D P
Sbjct: 62 LNFYLIEDSLYFVDVPGYGYAKVSKTERAKWGKMIETYITSRNQLEAVVSLVDFRHPPTV 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWI 281
D + +L +IP+ LV TK D K P N + +I+ F + +I
Sbjct: 122 EDKQMYDFLKYYEIPVILVATKVD---------KIPSSKWNKHENIIKKTLNFDSQDKFI 172
Query: 282 MTSSVTNQGRDE 293
+ SSVT +G++E
Sbjct: 173 LFSSVTKKGKEE 184
>gi|407718594|ref|YP_006795999.1| GTP-binding protein YsxC [Leuconostoc carnosum JB16]
gi|407242350|gb|AFT82000.1| GTP-binding protein YsxC [Leuconostoc carnosum JB16]
Length = 194
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 104/190 (54%), Gaps = 6/190 (3%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V + V S+V P+DG PE ALVGRSNVGKSSL N+L++RK A TS PGKTQ +
Sbjct: 3 VHNVDMVMSAVSAAQYPTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + + D Y VD+PGYGYA ++ R ++ + ++Y +R L V L+DA
Sbjct: 63 NFYNVEDQLYFVDVPGYGYAKVSKKQREEFGRMIEEYITSRKQLRGVVSLVDARHDPSED 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D+ WL IP+ +V TK DK K K + E N+ + I GF + S
Sbjct: 123 DVSMYEWLHYYNIPILIVATKSDKISKSK--FNKYEANI----KRILGFDDEDSDFQFFS 176
Query: 285 SVTNQGRDEI 294
S T G+D++
Sbjct: 177 SETKYGKDQV 186
>gi|403070279|ref|ZP_10911611.1| GTP-binding protein YsxC [Oceanobacillus sp. Ndiop]
Length = 195
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 90/150 (60%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +AE V S+V + P D LPE AL GRSNVGKSS +N L+ RK LA TS PGKTQ
Sbjct: 2 KVTKAEIVISAVSKKQYPGDMLPEIALAGRSNVGKSSFINKLINRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N ++IND +Y VD+PGYGYA ++ + W ++YFL R L +V L+ D
Sbjct: 62 LNFYKINDIFYFVDVPGYGYAKVSKKEKEKWGPMMEEYFLTRENLKAVLLITDLRHEPTK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
DL +L N + + ++ TK DK K K
Sbjct: 122 DDLRMYDFLKYNGVQVIIIGTKLDKIPKTK 151
>gi|444335379|ref|YP_007391748.1| GTP binding protein [Blattabacterium sp. (Blatta orientalis) str.
Tarazona]
gi|444299758|gb|AGD97995.1| GTP binding protein [Blattabacterium sp. (Blatta orientalis) str.
Tarazona]
Length = 209
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 113/201 (56%), Gaps = 11/201 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +F S +++ PE+A +GRSNVGKSSL+N + R+KLA S TPG+TQ
Sbjct: 2 KITSVKFEGSKIQSNQLFLSNFPEYAFIGRSNVGKSSLINWITNRRKLAKVSSTPGRTQF 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N F IN WYL+DLPGYGY++ ++ + K DY R LV++FLLID+ I +
Sbjct: 62 VNPFLINHKWYLIDLPGYGYSSICQKKKEKTQKLMMDYIFYRKNLVNLFLLIDSRIFMQK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK---RKKKKNGGKRPEENLNDFQELIQGFFQTAPPW 280
D+ + L QIP +VFTK DK R KN E +F++++ F+ P +
Sbjct: 122 SDIHFIKKLKIFQIPFCIVFTKTDKIHPRILNKN----IEFCKKEFEKIL---FE-MPKY 173
Query: 281 IMTSSVTNQGRDEILLHMAQL 301
S GRD+I+ ++ +
Sbjct: 174 FKVSIKNRIGRDKIIQYIQNI 194
>gi|304407486|ref|ZP_07389138.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus
curdlanolyticus YK9]
gi|304343437|gb|EFM09279.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus
curdlanolyticus YK9]
Length = 195
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 104/193 (53%), Gaps = 11/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEF+ S+VR + P D LPE AL GRSNVGKSSL+N ++ RK LA TS PGKTQ
Sbjct: 2 KITSAEFIISAVRPDQYPEDALPEIALAGRSNVGKSSLINRMILRKNLARTSSQPGKTQQ 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N+++IN+ Y VD PGYGYA + R W + + + R L V L++D
Sbjct: 62 LNYYKINEQIYFVDFPGYGYAKVSKTEREAWGRMIETFLKVREELKLVLLIVDIRHAPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP--PWI 281
D WL +IP+ +V TK D K P+ + +L++ Q P I
Sbjct: 122 DDCLMYDWLKHYEIPICIVVTKAD---------KIPKSKWDKQIKLVKETLQADPTDKVI 172
Query: 282 MTSSVTNQGRDEI 294
M SS GR+++
Sbjct: 173 MFSSELGLGREQL 185
>gi|374290162|ref|YP_005037215.1| GTP-binding protein [Blattabacterium sp. (Cryptocercus punctulatus)
str. Cpu]
gi|358376954|gb|AEU09142.1| GTP-binding protein [Blattabacterium sp. (Cryptocercus punctulatus)
str. Cpu]
Length = 213
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 107/202 (52%), Gaps = 6/202 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +F KS + PE+A GRSNVGKSSL+N ++ KK A S PG+T+
Sbjct: 2 KIFSVKFKKSIENSNQFFYSTFPEYAFSGRSNVGKSSLINFIINSKKEAKVSSYPGRTKF 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F IN WYL+DLPGYGY+ + + K KDY R+ LV +FLLID I +
Sbjct: 62 INFFLINHKWYLIDLPGYGYSFQKNRI-IEKKKLIKDYIFYRTNLVYLFLLIDCRIIIQK 120
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
+DL++ L I +VFTK DK K + N+N +E I+ F + P +
Sbjct: 121 LDLDFIKKLKTYNIHFCIVFTKTDKI-----NSKILDRNINYCKEKIEKNFFSMPKYFKV 175
Query: 284 SSVTNQGRDEILLHMAQLRNYW 305
S GR++++ + L Y+
Sbjct: 176 SVKKKYGREKLIQVIQNLNEYF 197
>gi|427412665|ref|ZP_18902857.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella ratti
ACS-216-V-Col6b]
gi|425716472|gb|EKU79456.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella ratti
ACS-216-V-Col6b]
Length = 230
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 113/220 (51%), Gaps = 21/220 (9%)
Query: 94 IVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLAL 153
+ K + ++ +++V S+VR + P E A +GRSNVGKSSL+NSL + LAL
Sbjct: 14 VYTCKAPQGPRIIASKYVASAVRPDQYPEGDTVEVAFLGRSNVGKSSLINSLCNHRGLAL 73
Query: 154 TSKTPGKTQCINHFRIND------------SWYLVDLPGYGYAAAPRELRTDWDKFTKDY 201
S PGKT+ IN F I W+LVDLPGYGYA + R W F DY
Sbjct: 74 VSGQPGKTKTINFFTITSKEDISETEERRYEWFLVDLPGYGYAKTDKSNRNIWSSFIADY 133
Query: 202 FLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEE 261
L L+ + LL+D P PID E +WL + +P+ +V TK DK K+ ++
Sbjct: 134 ILQSERLMLLCLLVDGRHPELPIDQEAFNWLREAGVPLQIVVTKVDKLNSKER-----QQ 188
Query: 262 NLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQL 301
N+ I+ F P I SS+ + GR+ +L + Q+
Sbjct: 189 NM----RFIKENFPCEAPAIPYSSLKHTGRELLLQRINQV 224
>gi|333981891|ref|YP_004511101.1| GTP-binding protein engB [Methylomonas methanica MC09]
gi|333805932|gb|AEF98601.1| GTP-binding protein engB [Methylomonas methanica MC09]
Length = 202
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 85/144 (59%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA+F+ S+ R +D P D E A GRSN GKSS +N+LV++ LA SKTPG+TQ +N
Sbjct: 7 QAKFINSAPRLQDAPPDQGMEIAFAGRSNAGKSSAINTLVQQNALARVSKTPGRTQLLNF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I+ LVDLPGYGYA P ++ DW K ++Y NR L + L++D P D
Sbjct: 67 FEIDTERKLVDLPGYGYAKVPVAVKRDWQKMMENYLKNRKALCGIVLVMDIRHPMTEFDW 126
Query: 227 EYASWLGQNQIPMTLVFTKCDKRK 250
+ W +P+ ++ TK DK K
Sbjct: 127 QMVEWCEHTHLPLHILLTKADKLK 150
>gi|302039585|ref|YP_003799907.1| GTP-binding protein EngB [Candidatus Nitrospira defluvii]
gi|300607649|emb|CBK43982.1| GTP-binding protein EngB [Candidatus Nitrospira defluvii]
Length = 200
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 91/154 (59%), Gaps = 7/154 (4%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
AEF+KSSV E P D LPE A VGRSNVGKSSL+NSL+ RKKLA SKTPGKT+ +N F
Sbjct: 6 AEFIKSSVSPEQFPPDRLPEIAFVGRSNVGKSSLINSLLHRKKLAKVSKTPGKTRAVNFF 65
Query: 168 RINDS------WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
+ S LVDLPGYGYA + +R W + Y R +L +V LLI+A +
Sbjct: 66 TVRTSDPKLSLLSLVDLPGYGYAKVSKTMRAQWGPMIEQYLEQRQSLGAVILLIEARV-W 124
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNG 255
P D+ W+ M +V TK DK ++ +
Sbjct: 125 MPQDVMTVQWVQSLGCGMIIVLTKADKLRQSERA 158
>gi|347753004|ref|YP_004860569.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus coagulans
36D1]
gi|347585522|gb|AEP01789.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus coagulans
36D1]
Length = 194
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 106/193 (54%), Gaps = 11/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +AE V S+VR E P LPE AL GRSNVGKSS +N ++ RK LA TS PGKTQ
Sbjct: 2 KVTEAELVISAVRQEQYPEGHLPEIALAGRSNVGKSSFINKMINRKALARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N ++I + Y VD+PGYG+A ++ R W + + Y +R L +V L++D P
Sbjct: 62 LNFYKIENKLYFVDVPGYGFAKVSKKEREKWGRMIETYMTSRKQLKTVVLIVDVRHPPTN 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGG--KRPEENLNDFQELIQGFFQTAPPWI 281
D ++L +IP +V TK DK K K K +E LN + I
Sbjct: 122 DDCLMYNFLKYYKIPCIVVATKADKIPKGKWASHLKTAKETLN---------LEKEDEII 172
Query: 282 MTSSVTNQGRDEI 294
+ SS T +G+D++
Sbjct: 173 LFSSETGEGKDKV 185
>gi|387929926|ref|ZP_10132603.1| GTP-binding protein YsxC [Bacillus methanolicus PB1]
gi|387586744|gb|EIJ79068.1| GTP-binding protein YsxC [Bacillus methanolicus PB1]
Length = 194
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 89/150 (59%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AE V S+V+ + P LPEFAL GRSNVGKSS +N ++ RK LA TS PGKTQ
Sbjct: 2 KINSAEIVVSAVKPDQYPGQALPEFALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IN ++Y VD+PGYGYA + R W K + YF +R L + L++D P
Sbjct: 62 LNFYLINGAFYFVDVPGYGYAKVSKSERAAWGKMIETYFTSREQLKAAVLIVDLRHPPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D+ +L +IP ++ TK DK K K
Sbjct: 122 DDVMMYDFLKHYEIPCIVIATKADKIPKGK 151
>gi|339320295|ref|YP_004679990.1| GTPase EngB [Candidatus Midichloria mitochondrii IricVA]
gi|338226420|gb|AEI89304.1| GTPase EngB [Candidatus Midichloria mitochondrii IricVA]
Length = 195
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 112/194 (57%), Gaps = 10/194 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA F+ S+ + P LPE A +GRSNVGKSSL+N++V K+A TSKTPG+TQ IN
Sbjct: 5 QATFLTSAANLRNLPKTQLPEIAFIGRSNVGKSSLINAIVGNAKIAKTSKTPGRTQQINF 64
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F++ + + +VDLPGYGYA+AP ++ W +F +Y NR L VF+LID+ I K +DL
Sbjct: 65 FKLPE-FIIVDLPGYGYASAPIKVIQKWQEFNLEYIKNRQQLKLVFILIDSRIGFKELDL 123
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSV 286
L + + +++TK D+ K + + ND L++ P ++ SS
Sbjct: 124 NLIEQLNEAGVKCRIIYTKVDQLNKSEIEILKSITTFNDRYPLLE------PNALIASSK 177
Query: 287 TNQGRDEI---LLH 297
+G + I +LH
Sbjct: 178 NKEGIERIRKVILH 191
>gi|381182038|ref|ZP_09890862.1| GTP-binding protein YsxC [Listeriaceae bacterium TTU M1-001]
gi|380318071|gb|EIA21366.1| GTP-binding protein YsxC [Listeriaceae bacterium TTU M1-001]
Length = 194
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 104/191 (54%), Gaps = 11/191 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V E V S+V E P+D LPEFAL GRSNVGKSS +N ++RRK +A S+ PGKTQ +
Sbjct: 3 VNNVELVISAVWQEQYPADSLPEFALAGRSNVGKSSFINKMIRRKSMARISQKPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N ++I ++ Y VD+PGYG+A + R W + + Y +R L +V +ID
Sbjct: 63 NFYKIEETLYFVDVPGYGFAKVSKREREKWGEMIETYITSREQLRAVIQIIDLRHKPTND 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D+ +L QIP+ +V TK DK R K + K E L+ F ++M
Sbjct: 123 DVMMYEFLKYYQIPVIIVATKADKIPRSKWQKHAKIVRETLD---------FDKEDDFVM 173
Query: 283 TSSVTNQGRDE 293
SS T G++E
Sbjct: 174 FSSETGMGKEE 184
>gi|328957598|ref|YP_004374984.1| ribosome biogenesis GTP-binding protein YsxC [Carnobacterium sp.
17-4]
gi|328673922|gb|AEB29968.1| ribosome biogenesis GTP-binding protein YsxC [Carnobacterium sp.
17-4]
Length = 195
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 110/192 (57%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +A+ V S+V P+ GLPE AL GRSNVGKSS +N+++ RK LA TS PGKTQ
Sbjct: 2 KVNKADIVISAVSPAQYPNTGLPEIALAGRSNVGKSSFINTMINRKGLARTSGKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N++ I D++Y VD+PGYGYA + R W + + YF R TL + ++D P
Sbjct: 62 LNYYIIEDTFYFVDVPGYGYAKVSKTERAKWGQMLETYFTQRDTLKAALSVVDLRHPPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D++ +L + IP+ ++ TK DK R K K ++ LN +E ++
Sbjct: 122 DDVQMYEFLKYHSIPVIVIATKADKIPRSKWNKHIKVVKDKLNLREE---------DEFV 172
Query: 282 MTSSVTNQGRDE 293
+ SS T +G+D+
Sbjct: 173 LFSSETGEGKDK 184
>gi|336114567|ref|YP_004569334.1| small GTP-binding protein [Bacillus coagulans 2-6]
gi|335367997|gb|AEH53948.1| small GTP-binding protein [Bacillus coagulans 2-6]
Length = 194
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 106/193 (54%), Gaps = 11/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +AE V S+VR E P LPE AL GRSNVGKSS +N ++ RK LA TS PGKTQ
Sbjct: 2 KVTEAELVISAVRQEQYPEGHLPEIALAGRSNVGKSSFINKMINRKALARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N ++I + Y VD+PGYG+A ++ R W + + Y +R L +V L++D P
Sbjct: 62 LNFYKIENKMYFVDVPGYGFAKVSKKEREKWGQMIEAYMTSRKQLKTVVLIVDVRHPPTN 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGG--KRPEENLNDFQELIQGFFQTAPPWI 281
D ++L +IP +V TK DK K K K +E LN + I
Sbjct: 122 DDCLMYNFLKYYKIPCIVVATKADKIPKGKWASHLKTAKETLN---------LEKEDEII 172
Query: 282 MTSSVTNQGRDEI 294
+ SS T +G+D++
Sbjct: 173 LFSSETGEGKDKV 185
>gi|157273342|gb|ABV27241.1| GTP-binding protein [Candidatus Chloracidobacterium thermophilum]
Length = 201
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 101/191 (52%), Gaps = 11/191 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V A F+KS+ D P LPE A +GRSNVGKSSL+NSL+ + LA TS TPG+TQ
Sbjct: 2 KVVAATFLKSATVAADYPPPTLPEVAFLGRSNVGKSSLINSLLGVRGLARTSNTPGRTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F IN VDLPGYGYA P+++R W + Y +RS L L++D + +P
Sbjct: 62 INFFEINRELRFVDLPGYGYARVPQKIRERWRPMIESYLYHRSALALCVLIVDVRLAPQP 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
+D WL P LV TK DK + + L+ L + P+
Sbjct: 122 LDRTMYEWLVATSRPFCLVATKADKLSR--------SQLLSQLSVLRAAYGPDVLPY--- 170
Query: 284 SSVTNQGRDEI 294
SS+T G D++
Sbjct: 171 SSLTRAGADQV 181
>gi|312143238|ref|YP_003994684.1| ribosome biogenesis GTP-binding protein YsxC [Halanaerobium
hydrogeniformans]
gi|311903889|gb|ADQ14330.1| ribosome biogenesis GTP-binding protein YsxC [Halanaerobium
hydrogeniformans]
Length = 200
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 89/145 (61%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+++ A+F KS + E+CP PE A GRSNVGKSSL+N + +RKKLA TS TPG+TQ
Sbjct: 2 KLSNAKFYKSVYKYEECPRLQQPEVAFSGRSNVGKSSLINRITKRKKLARTSNTPGRTQS 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N+F I+D +YLVDLPGYG+A P++++ DW + Y R L+ + +ID+
Sbjct: 62 LNYFNIDDKFYLVDLPGYGFANVPKKVKDDWAELIDSYLNYRENLIGIVQIIDSRHKPTK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK 248
D WL + + + TK DK
Sbjct: 122 DDKMMVEWLKASGLSFLIAATKVDK 146
>gi|373455368|ref|ZP_09547204.1| ribosome biogenesis GTP-binding protein YsxC [Dialister
succinatiphilus YIT 11850]
gi|371935008|gb|EHO62781.1| ribosome biogenesis GTP-binding protein YsxC [Dialister
succinatiphilus YIT 11850]
Length = 213
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 111/203 (54%), Gaps = 20/203 (9%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+ + +V+++V +DG E A +GRSNVGKSSL+NSL RKKLA S+ PGKT+
Sbjct: 11 HIFSSAYVRAAVNRSQYVNDGKKEIAFIGRSNVGKSSLINSLCGRKKLAFVSREPGKTRT 70
Query: 164 INHFRIN-----------DSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVF 212
IN++ I WYLVDLPGYG+A ++ + W F DY + +L +
Sbjct: 71 INYYAIQSRRMENEEEVRQDWYLVDLPGYGFAKTSQQNKDSWSAFIADYLEHSPSLQMIG 130
Query: 213 LLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQG 272
LLID P PID++ WL + ++ TK DK K+ + L ++L++
Sbjct: 131 LLIDLRHPGLPIDMKAYEWLRSIAPSLQIIGTKGDKLKRNE---------LVKNKKLLEK 181
Query: 273 FFQTAPPWIMTSSVTNQGRDEIL 295
+F P I S++T +GR+E+L
Sbjct: 182 YFPGDFPPIAYSALTGEGREELL 204
>gi|117926943|ref|YP_867560.1| small GTP-binding protein [Magnetococcus marinus MC-1]
gi|117610699|gb|ABK46154.1| small GTP-binding protein [Magnetococcus marinus MC-1]
Length = 218
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 87/141 (61%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
AEFV +V+ E P DGLPE A GRSNVGKSSLLN L+ R++LA S TPG+T+ +N F
Sbjct: 12 AEFVVGAVKPEQYPDDGLPEVAFAGRSNVGKSSLLNKLLNRRQLARVSNTPGRTRELNFF 71
Query: 168 RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
RIN ++Y VDLPGYGYA R R WD+ YF +R L +V LL+D D
Sbjct: 72 RINQAYYYVDLPGYGYAKVGRGQREVWDRGIGLYFNSRRDLRAVILLLDIRRGMTEQDQA 131
Query: 228 YASWLGQNQIPMTLVFTKCDK 248
++ + +P+ V TK DK
Sbjct: 132 MLDFIFKMGLPVLPVLTKSDK 152
>gi|227877366|ref|ZP_03995437.1| GTPase [Lactobacillus crispatus JV-V01]
gi|256842925|ref|ZP_05548413.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus 125-2-CHN]
gi|256848700|ref|ZP_05554134.1| ATP-dependent protease [Lactobacillus crispatus MV-1A-US]
gi|262045892|ref|ZP_06018856.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus MV-3A-US]
gi|293381820|ref|ZP_06627792.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus 214-1]
gi|312978252|ref|ZP_07789995.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus CTV-05]
gi|423317764|ref|ZP_17295661.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus FB049-03]
gi|423321102|ref|ZP_17298974.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus FB077-07]
gi|227863034|gb|EEJ70482.1| GTPase [Lactobacillus crispatus JV-V01]
gi|256614345|gb|EEU19546.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus 125-2-CHN]
gi|256714239|gb|EEU29226.1| ATP-dependent protease [Lactobacillus crispatus MV-1A-US]
gi|260573851|gb|EEX30407.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus MV-3A-US]
gi|290921606|gb|EFD98636.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus 214-1]
gi|310894771|gb|EFQ43842.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus CTV-05]
gi|405596425|gb|EKB69761.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus FB077-07]
gi|405597823|gb|EKB71073.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus FB049-03]
Length = 196
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 103/167 (61%), Gaps = 10/167 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ + + S+VR + P D LPE AL GRSNVGKSSL+N+L++RK LA TS PGKTQ +
Sbjct: 3 IESSSYAVSAVREDQYPKDNLPEIALAGRSNVGKSSLINTLLKRKNLARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N +++N+ +YLVD+PGYGYA ++ R ++ + +DY R L + +L+D+
Sbjct: 63 NFYKVNEKFYLVDVPGYGYAKVSQKKRQEFGEMIQDYLETRPNLKGLIILVDSRHEPTKD 122
Query: 225 DL---EYASWLGQNQIPMTLVFTKCDKRKKKKNG----GKRPEENLN 264
D+ +YA +L IP+ +V TK DK KK + G + + NLN
Sbjct: 123 DIAMYDYAQYLN---IPILVVCTKMDKIKKSQTNKVMSGLKKKLNLN 166
>gi|295692730|ref|YP_003601340.1| GTP-binding protein engb [Lactobacillus crispatus ST1]
gi|295030836|emb|CBL50315.1| Probable GTP-binding protein engB [Lactobacillus crispatus ST1]
Length = 196
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 103/167 (61%), Gaps = 10/167 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ + + S+VR + P D LPE AL GRSNVGKSSL+N+L++RK LA TS PGKTQ +
Sbjct: 3 IKSSSYAVSAVREDQYPKDNLPEIALAGRSNVGKSSLINTLLKRKNLARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N +++N+ +YLVD+PGYGYA ++ R ++ + +DY R L + +L+D+
Sbjct: 63 NFYKVNEKFYLVDVPGYGYAKVSQKKRQEFGEMIQDYLETRPNLKGLIILVDSRHEPTKD 122
Query: 225 DL---EYASWLGQNQIPMTLVFTKCDKRKKKKNG----GKRPEENLN 264
D+ +YA +L IP+ +V TK DK KK + G + + NLN
Sbjct: 123 DIAMYDYAQYLN---IPILVVCTKMDKIKKSQTNKVMSGLKKKLNLN 166
>gi|331005490|ref|ZP_08328868.1| GTP-binding protein EngB [gamma proteobacterium IMCC1989]
gi|330420682|gb|EGG94970.1| GTP-binding protein EngB [gamma proteobacterium IMCC1989]
Length = 208
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 88/144 (61%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A F++S+ + CP+ E A GRSN GKSS +N+L KKLA TSKTPG+TQ IN+F
Sbjct: 10 AVFLQSASKLSQCPTAITAEVAFAGRSNAGKSSAINTLTDNKKLARTSKTPGRTQLINYF 69
Query: 168 RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
IN LVDLPGYGYA P ++ +WDK +Y +R L + LL+D P + D
Sbjct: 70 SINAEKSLVDLPGYGYAKVPISMKREWDKNLTEYLQSRDVLKGLVLLMDIRHPMQEFDTM 129
Query: 228 YASWLGQNQIPMTLVFTKCDKRKK 251
+ N++P+ ++ TKCDK KK
Sbjct: 130 MLNQAIDNEMPVRILLTKCDKLKK 153
>gi|325290591|ref|YP_004266772.1| GTP-binding protein engB [Syntrophobotulus glycolicus DSM 8271]
gi|324965992|gb|ADY56771.1| GTP-binding protein engB [Syntrophobotulus glycolicus DSM 8271]
Length = 217
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 82/144 (56%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ + E++ S+V+ E P E A+ GRSNVGKSSL+N + RK +A +TPGKTQ I
Sbjct: 3 IRKVEYIISAVKPEQYPPGVSMELAVAGRSNVGKSSLINKFLNRKNMARVGQTPGKTQAI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F IND WYLVDLPGYGYA E++ W + + YF R L+ V L+D
Sbjct: 63 NFFHINDEWYLVDLPGYGYAKVSLEVKARWGRMMQTYFQKRGNLLGVIQLVDIRHKPTED 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK 248
D L IPM LV TK DK
Sbjct: 123 DKTMVKMLRDRGIPMLLVATKADK 146
>gi|163791245|ref|ZP_02185661.1| GTP-binding protein [Carnobacterium sp. AT7]
gi|159873515|gb|EDP67603.1| GTP-binding protein [Carnobacterium sp. AT7]
Length = 195
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 109/192 (56%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +A+ V S+V PS GLPE AL GRSNVGKSS +N+++ RK LA TS PGKTQ
Sbjct: 2 KVNKADIVISAVSPAQYPSTGLPEIALAGRSNVGKSSFINTMINRKGLARTSGKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N++ I DS+Y VD+PGYGYA + R W + + YF R TL ++D P
Sbjct: 62 LNYYIIEDSFYFVDVPGYGYAKVSKTERAKWGQMLEVYFTQRETLKVALSVVDLRHPPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D++ +L + IP+ +V TK DK R K K ++ LN +E ++
Sbjct: 122 DDVQMYEFLKYHSIPVIVVATKADKIPRGKWNKHIKIVKDKLNIREE---------DHFV 172
Query: 282 MTSSVTNQGRDE 293
+ SS T +G+++
Sbjct: 173 LFSSETGEGKEQ 184
>gi|259046800|ref|ZP_05737201.1| ribosome biogenesis GTP-binding protein YsxC [Granulicatella
adiacens ATCC 49175]
gi|259036568|gb|EEW37823.1| ribosome biogenesis GTP-binding protein YsxC [Granulicatella
adiacens ATCC 49175]
Length = 199
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 88/145 (60%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +AEF S+V P+ LPE AL GRSNVGKSS +N L++RK LA TS PGKTQ
Sbjct: 2 KVNKAEFTISAVSPAQYPAGDLPEIALSGRSNVGKSSFINKLIQRKSLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IN+ +Y VD+PGYGYA ++ R W K ++Y R +L V +L+D
Sbjct: 62 LNFYHINELFYFVDVPGYGYAKVSKKEREKWGKMIEEYITTRQSLRLVLILVDFRHEPSQ 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK 248
D++ +L IP +V TKCDK
Sbjct: 122 EDVQMREFLEYYNIPYRIVMTKCDK 146
>gi|294501425|ref|YP_003565125.1| hypothetical protein BMQ_4688 [Bacillus megaterium QM B1551]
gi|295706773|ref|YP_003599848.1| hypothetical protein BMD_4674 [Bacillus megaterium DSM 319]
gi|384044739|ref|YP_005492756.1| GTPase EngB [Bacillus megaterium WSH-002]
gi|294351362|gb|ADE71691.1| GTP-binding conserved hypothetical protein [Bacillus megaterium QM
B1551]
gi|294804432|gb|ADF41498.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
gi|345442430|gb|AEN87447.1| GTPase EngB [Bacillus megaterium WSH-002]
Length = 195
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 91/150 (60%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V QA+ V S+VR E P + LPEFAL GRSNVGKSS +N ++ RK LA TS PGKTQ
Sbjct: 2 KVTQADIVISAVRPEQYPKENLPEFALAGRSNVGKSSFINKMLNRKSLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N F IN+ + VD+PGYG+A ++ R W K + Y NR L +V +++D
Sbjct: 62 LNFFLINEILHFVDVPGYGFAKVSKKEREAWGKMIETYLTNREQLKAVLMIVDLRHAPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D+ +L + +P+ ++ TK DK K K
Sbjct: 122 DDVMMYEFLKHHDLPVMVIATKADKIPKGK 151
>gi|357403764|ref|YP_004915688.1| GTP-binding protein [Methylomicrobium alcaliphilum 20Z]
gi|351716429|emb|CCE22089.1| Putative GTP-binding protein [Methylomicrobium alcaliphilum 20Z]
Length = 202
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 106/200 (53%), Gaps = 10/200 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA+F+ S+ +D P D E A GRSN GKSS +N+L +K LA SKTPG+TQ +N
Sbjct: 7 QAKFINSAPHVKDAPEDIGLEVAFAGRSNAGKSSAINTLTGQKSLARISKTPGRTQLLNF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I ++ VDLPGYGYA P E++ W + + Y NR TL + L++D P D
Sbjct: 67 FSITETTRFVDLPGYGYAKVPLEIKKQWHRMIETYLNNRKTLCGIVLVMDIRHPLTEFDR 126
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSV 286
+ W Q ++P+ ++ TK DK K + L Q+ I G Q + S++
Sbjct: 127 QMVDWCKQTRLPLHILLTKADKLKFGA-----AKNTLLAVQKEISG-AQVPVTVQLFSAL 180
Query: 287 TNQGRDEILLHMAQLRNYWL 306
QG DEI QL + WL
Sbjct: 181 KRQGVDEI----HQLLDQWL 196
>gi|395242145|ref|ZP_10419144.1| GTPase [Lactobacillus pasteurii CRBIP 24.76]
gi|394480506|emb|CCI85384.1| GTPase [Lactobacillus pasteurii CRBIP 24.76]
Length = 195
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 106/190 (55%), Gaps = 16/190 (8%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ ++E+ S+V+ P D PE AL GRSNVGKSSL+N+L+ RK LA TS PGKTQ +
Sbjct: 3 IKKSEYAVSAVKESQYPKDNFPEIALAGRSNVGKSSLINTLINRKNLARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N +RIN +YLVD+PGYGYA ++ R ++ + +DY R L + +L+D
Sbjct: 63 NFYRINGEFYLVDVPGYGYAKVSQKKRQEFGEMIQDYLETRENLKGLMILVDGRHEPTQD 122
Query: 225 DL---EYASWLGQNQIPMTLVFTKCDKRKK----------KKNGGKRPEENLNDFQELIQ 271
D+ +YA +L +P+ +V TK DK KK KK+ G R ++ L F + +
Sbjct: 123 DIAMYQYAQYL---DLPILVVATKIDKIKKSQVNKAISVIKKSLGLRDKDQLLTFSSVQK 179
Query: 272 GFFQTAPPWI 281
W+
Sbjct: 180 FHLAELQGWV 189
>gi|339498009|ref|ZP_08658985.1| GTP-binding protein YsxC [Leuconostoc pseudomesenteroides KCTC
3652]
Length = 197
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 105/204 (51%), Gaps = 16/204 (7%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V E V S+V P+DG PE ALVGRSNVGKSSL N+L+ RK A TS PGKTQ +
Sbjct: 3 VHNVEMVMSAVSATQYPTDGKPEIALVGRSNVGKSSLTNTLINRKNFARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + + D Y VD+PGYGYA ++ R + ++Y +R L V L+DA
Sbjct: 63 NFYNVEDQLYFVDVPGYGYAKVSKKQREAFGHMIEEYITSRKQLRGVISLVDARHDPSDD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQ---GFFQTAPPWI 281
D+ WL IP+ +V TK DK + + N ++ I+ GF + +
Sbjct: 123 DISMYEWLHYYNIPILVVATKSDKISRSR---------FNKYESNIKRTLGFDEEDSDFQ 173
Query: 282 MTSSVTNQGRDE----ILLHMAQL 301
SS T G+DE I H+ Q+
Sbjct: 174 FFSSETKYGKDEVWQWIETHLNQM 197
>gi|333398282|ref|ZP_08480095.1| GTP-binding protein YsxC [Leuconostoc gelidum KCTC 3527]
gi|406600262|ref|YP_006745608.1| GTP-binding protein YsxC [Leuconostoc gelidum JB7]
gi|406371797|gb|AFS40722.1| GTP-binding protein YsxC [Leuconostoc gelidum JB7]
Length = 194
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 102/193 (52%), Gaps = 12/193 (6%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V + V S+V P+DG PE ALVGRSNVGKSSL N+L++RK A TS PGKTQ +
Sbjct: 3 VHNVDMVMSAVSAAQYPTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + + D Y VD+PGYGYA ++ R ++ ++Y +R L V L+DA
Sbjct: 63 NFYNVEDKLYFVDVPGYGYAKVSKKQREEFGHMIEEYITSRKQLRGVVSLVDARHEPSDD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQ---GFFQTAPPWI 281
D+ WL IP+ +V TK DK K K N + I+ GF + +
Sbjct: 123 DVSMYEWLHYYNIPILIVATKSDKISKSK---------FNKYASNIKQTLGFNEDESDFQ 173
Query: 282 MTSSVTNQGRDEI 294
SS T G+D++
Sbjct: 174 FFSSETKYGKDQV 186
>gi|379012037|ref|YP_005269849.1| GTP-binding protein EngB [Acetobacterium woodii DSM 1030]
gi|375302826|gb|AFA48960.1| GTP-binding protein EngB [Acetobacterium woodii DSM 1030]
Length = 194
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 107/200 (53%), Gaps = 11/200 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +AE V S+V P D LPE L+GRSNVGKS+ +N+L+ R+ LA TS PGKTQ
Sbjct: 2 KVTKAEIVISAVAEAQYPDDNLPEIVLLGRSNVGKSTFVNTLIERRGLARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +RIND ++ VD+PGYGYA A + R W K + Y NR+ +F LID+
Sbjct: 62 MNFYRINDQFHFVDMPGYGYAKASKTEREKWGKMIEKYLRNRNNATLIFQLIDSRHEPSE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKK--KKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+ WL + ++ TK DK K +K R LN ++A I
Sbjct: 122 DDILMYEWLVHYGLNPLIIGTKADKISKINQKKSVNRIANILN---------LRSAQEVI 172
Query: 282 MTSSVTNQGRDEILLHMAQL 301
+ SS T G++ + H+ +
Sbjct: 173 LFSSETKLGKEVVWEHIENV 192
>gi|182627119|ref|ZP_02954837.1| hypothetical protein CJD_0168 [Clostridium perfringens D str.
JGS1721]
gi|177907508|gb|EDT70166.1| hypothetical protein CJD_0168 [Clostridium perfringens D str.
JGS1721]
Length = 197
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 110/197 (55%), Gaps = 11/197 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +EF+ S+V+ E P + LPE A VGRSNVGKSS++NSL R+ LA S+TPGKT+
Sbjct: 2 KIKSSEFIISAVKREQYPDNNLPEIAFVGRSNVGKSSIINSLTNRRGLAKVSQTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F +N +YLVDLPGYGYA ++ + W + Y LNR L V LL+D
Sbjct: 62 INFFLLNKDFYLVDLPGYGYAKVSKKEKASWGATIERYLLNRGPLKKVVLLVDCRHKPTA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGG--KRPEENLNDFQELIQGFFQTAPPWI 281
D++ W+ + ++ TK DK + G K +E L ++ FF
Sbjct: 122 DDVQMYEWIKHYGYEVVVIATKSDKISNNQIGKSEKLIKETLGLPKDHKLKFF------- 174
Query: 282 MTSSVTNQGRDEILLHM 298
SS+ +G+DE++ ++
Sbjct: 175 --SSLNKKGKDELVDYL 189
>gi|189347671|ref|YP_001944200.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium limicola
DSM 245]
gi|238692196|sp|B3EGV8.1|ENGB_CHLL2 RecName: Full=Probable GTP-binding protein EngB
gi|189341818|gb|ACD91221.1| GTP-binding protein HSR1-related [Chlorobium limicola DSM 245]
Length = 192
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 100/194 (51%), Gaps = 9/194 (4%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A F KS P + PE VGRSNVGKSSLLNSL K LA TS TPGKT+
Sbjct: 2 KIINAVFYKSVSALTGLPEETFPEIVFVGRSNVGKSSLLNSLTGVKGLAKTSSTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN+F+IN + Y VDLPGYGYAA + W Y R + V +L+D+ PA
Sbjct: 62 INYFQINGNIYFVDLPGYGYAAVGHAEKAHWGNLLVSYIEKRRAIALVLVLVDSRHPAMA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D E ++L P ++ TK DK +K+ R E ++ F A +
Sbjct: 122 SDREMMAFLEYLDRPYGIIMTKDDKLTQKERAAARRE---------MESFSAKAKFIVNY 172
Query: 284 SSVTNQGRDEILLH 297
SS + +G+ E+L H
Sbjct: 173 SSFSGKGKAELLAH 186
>gi|300173594|ref|YP_003772760.1| GTP-binding protein engB [Leuconostoc gasicomitatum LMG 18811]
gi|299887973|emb|CBL91941.1| GTP-binding protein engB [Leuconostoc gasicomitatum LMG 18811]
Length = 194
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 102/193 (52%), Gaps = 12/193 (6%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V + V S+V P+DG PE ALVGRSNVGKSSL N+L++RK A TS PGKTQ +
Sbjct: 3 VHNVDMVMSAVSAAQYPTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + + D Y VD+PGYGYA ++ R ++ ++Y +R L V L+DA
Sbjct: 63 NFYNVEDKLYFVDVPGYGYAKVSKKQREEFGHMIEEYITSRKQLRGVVSLVDARHEPSDD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQ---GFFQTAPPWI 281
D+ WL IP+ +V TK DK K K N + I+ GF + +
Sbjct: 123 DVSMYEWLHYYNIPILIVATKSDKISKSK---------FNKYASNIKQTLGFDEDESDFQ 173
Query: 282 MTSSVTNQGRDEI 294
SS T G+D++
Sbjct: 174 FFSSETKYGKDQV 186
>gi|399516026|ref|ZP_10757650.1| GTP-binding protein EngB [Leuconostoc pseudomesenteroides 4882]
gi|398649120|emb|CCJ65677.1| GTP-binding protein EngB [Leuconostoc pseudomesenteroides 4882]
Length = 197
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 101/193 (52%), Gaps = 12/193 (6%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V E V S+V P+DG PE ALVGRSNVGKSSL N+L+ RK A TS PGKTQ +
Sbjct: 3 VHNVEMVMSAVSATQYPTDGKPEIALVGRSNVGKSSLTNTLINRKNFARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + + D Y VD+PGYGYA ++ R + ++Y +R L V L+DA
Sbjct: 63 NFYNVEDQLYFVDVPGYGYAKVSKKQREAFGHMIEEYITSRKQLRGVISLVDARHDPSDD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQ---GFFQTAPPWI 281
D+ WL IP+ +V TK DK + + N ++ I+ GF + +
Sbjct: 123 DISMYEWLHYYNIPILVVATKSDKISRSR---------FNKYESNIKRTLGFDEEDSDFQ 173
Query: 282 MTSSVTNQGRDEI 294
SS T G+DE+
Sbjct: 174 FFSSETKYGKDEV 186
>gi|429766110|ref|ZP_19298384.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium celatum
DSM 1785]
gi|429185090|gb|EKY26079.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium celatum
DSM 1785]
Length = 206
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 106/193 (54%), Gaps = 11/193 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ ++EF+ S+V+ P DG E A VGRSNVGKSS++N+L R+KLA S+TPGKT+ I
Sbjct: 3 IKKSEFIISAVKRNQYPIDGRNEIAFVGRSNVGKSSIINALTNRRKLAKVSQTPGKTRLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F IND +YLVDLPGYGYA ++ + W K + Y +R L V LL+D+
Sbjct: 63 NFFLINDDFYLVDLPGYGYAKVSKKEKESWGKTIETYLTDRDELKRVILLVDSRHKPTAD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRP--EENLNDFQELIQGFFQTAPPWIM 282
D+ W+ ++ TK DK + G R +E L G T +
Sbjct: 123 DIMMYEWIKHYDYDCIVIATKSDKLSNNELGKSRKLIKETL--------GLGNTDKFYFF 174
Query: 283 TSSVTNQGRDEIL 295
SS+ +G+DE++
Sbjct: 175 -SSLNKKGKDELI 186
>gi|407788370|ref|ZP_11135502.1| GTP-binding protein YsxC [Celeribacter baekdonensis B30]
gi|407197651|gb|EKE67705.1| GTP-binding protein YsxC [Celeribacter baekdonensis B30]
Length = 215
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 101/196 (51%), Gaps = 5/196 (2%)
Query: 106 AQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCIN 165
AQ EFVK V + P D E GRSNVGKSSL+N+L K LA S TPG+TQ IN
Sbjct: 24 AQTEFVKGVVAMDGMPPDDRLEVCFAGRSNVGKSSLINALTGHKALARASNTPGRTQEIN 83
Query: 166 HFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPID 225
F +DS YLVDLPGYGYA AP + W + K Y R+TL F+LID+ K +D
Sbjct: 84 FFTASDSHYLVDLPGYGYAKAPIQTVEKWQRLLKAYLSGRATLRRAFVLIDSRHGVKSVD 143
Query: 226 LEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSS 285
E L ++ + +V TK DK K+ + L + + P I+TSS
Sbjct: 144 EEIMDRLDKSAVTFQVVLTKADKVKEVERAAI-----LEQVRTAVAKHPAAYPELIVTSS 198
Query: 286 VTNQGRDEILLHMAQL 301
G D + +A L
Sbjct: 199 EKGWGIDVLRAVIATL 214
>gi|260583671|ref|ZP_05851419.1| ribosome biogenesis GTP-binding protein YsxC [Granulicatella
elegans ATCC 700633]
gi|260158297|gb|EEW93365.1| ribosome biogenesis GTP-binding protein YsxC [Granulicatella
elegans ATCC 700633]
Length = 197
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 100/188 (53%), Gaps = 10/188 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V AEF S+V P+D E AL GRSNVGKSS +N L++RK LA TS PGKTQ
Sbjct: 2 KVTNAEFTISAVGPNQYPTDQKVEIALSGRSNVGKSSFINRLIQRKSLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IND +Y VD+PGYGYA ++ R W K ++Y R L V +L+D
Sbjct: 62 LNFYHINDLFYFVDVPGYGYAKVSKKEREKWGKMIEEYITTRENLELVLILVDFRHEPST 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK--RKK--------KKNGGKRPEENLNDFQELIQGF 273
D++ +L +IP ++ TKCDK R K +K GK PEE F
Sbjct: 122 EDVQMREFLEYYEIPYRIIMTKCDKIPRGKWNKHVSQIRKAFGKPPEELFLTFSSETGEG 181
Query: 274 FQTAPPWI 281
+ A WI
Sbjct: 182 VEKAWEWI 189
>gi|163781961|ref|ZP_02176961.1| hypothetical protein HG1285_03723 [Hydrogenivirga sp. 128-5-R1-1]
gi|159883181|gb|EDP76685.1| hypothetical protein HG1285_03723 [Hydrogenivirga sp. 128-5-R1-1]
Length = 184
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 110/190 (57%), Gaps = 14/190 (7%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+ EF+KS+ T D P PE VGRSNVGKSSL+N +V + +A SK PG+T+ IN+
Sbjct: 2 KVEFLKST--TADFPPPDKPEVVFVGRSNVGKSSLIN-MVTGRNIARVSKEPGRTRTINY 58
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNR-STLVSVFLLIDASIPAKPID 225
F +NDS YLVD+PGYG+A P+E + W + ++YF R + VFLLIDA + +D
Sbjct: 59 FLLNDSVYLVDVPGYGFARVPKEEQDKWKRMMENYFKGRKENIRVVFLLIDAVAGVQKLD 118
Query: 226 LEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSS 285
+ WL +P +V TK DK K+K+ L +EL+ + +M+S+
Sbjct: 119 RQMIEWLQFVGLPFVVVLTKTDKAKQKE-----LSRTLKQVKELV-----GSSAIVMSSA 168
Query: 286 VTNQGRDEIL 295
+G+ EIL
Sbjct: 169 REGRGKKEIL 178
>gi|205374362|ref|ZP_03227160.1| GTPase EngB [Bacillus coahuilensis m4-4]
Length = 193
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 88/150 (58%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V AE V S+VR E P D LPEFAL GRSNVGKSS +N ++ RK LA S PGKTQ
Sbjct: 2 KVNNAEIVISAVRPEQYPDDNLPEFALAGRSNVGKSSFINKMLGRKSLARISSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + I + Y VD+PGYGYA + R W K + YF +R L + L++D P
Sbjct: 62 LNFYIIEEQLYFVDVPGYGYAKVSKTERAAWGKMIETYFTSRDKLEAAVLIVDLRHPPTK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D+ ++ +IP+ ++ TK DK K K
Sbjct: 122 DDIMMYDFIKHYEIPVIIIATKADKIPKGK 151
>gi|296110625|ref|YP_003621006.1| GTP-binding protein [Leuconostoc kimchii IMSNU 11154]
gi|339490283|ref|YP_004704788.1| GTP-binding protein YsxC [Leuconostoc sp. C2]
gi|295832156|gb|ADG40037.1| GTP-binding protein [Leuconostoc kimchii IMSNU 11154]
gi|338851955|gb|AEJ30165.1| GTP-binding protein YsxC [Leuconostoc sp. C2]
Length = 194
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 104/190 (54%), Gaps = 6/190 (3%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V + V S+V P+DG PE ALVGRSNVGKSSL N+L++RK A TS PGKTQ +
Sbjct: 3 VHNVDMVMSAVSASQYPTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + + D Y VD+PGYGYA ++ R ++ + ++Y +R L V L+DA
Sbjct: 63 NFYNVEDKLYFVDVPGYGYAKVSKKQREEFGRMIEEYITSRKQLRGVVSLVDARHEPSDD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D+ WL IP+ +V TK DK K K + E N+ + + GF + S
Sbjct: 123 DVSMYEWLHFYNIPILVVATKSDKISKGK--FNKYESNI----KRVLGFDSDDSDFQFFS 176
Query: 285 SVTNQGRDEI 294
S T G+D++
Sbjct: 177 SETKYGKDQV 186
>gi|384917732|ref|ZP_10017842.1| ribosome biogenesis GTP-binding protein YsxC [Citreicella sp. 357]
gi|384468373|gb|EIE52808.1| ribosome biogenesis GTP-binding protein YsxC [Citreicella sp. 357]
Length = 217
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 99/182 (54%), Gaps = 5/182 (2%)
Query: 109 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFR 168
+F+K V E P D PE GRSNVGKSSL+N+L RK LA S TPG+TQ IN+F
Sbjct: 29 DFLKGVVAMEGLPPDDRPEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINYFL 88
Query: 169 INDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEY 228
+ DS YLVDLPGYG+A AP + W + K Y R++L F+LIDA K +D E
Sbjct: 89 LGDSGYLVDLPGYGFANAPLPVVEKWQRLLKHYLSGRASLRRAFVLIDARHGIKAVDEEI 148
Query: 229 ASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTN 288
+ L ++ + V TK DK + + + L ++ + P ++TSS
Sbjct: 149 MTLLDRSAVTFQAVLTKIDKIRDSER-----DTVLTQVRDRLSRHPAAYPEIVLTSSEKG 203
Query: 289 QG 290
+G
Sbjct: 204 EG 205
>gi|421870974|ref|ZP_16302596.1| ribosome biogenesis GTP-binding protein YsxC [Brevibacillus
laterosporus GI-9]
gi|372459601|emb|CCF12145.1| ribosome biogenesis GTP-binding protein YsxC [Brevibacillus
laterosporus GI-9]
Length = 211
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 105/191 (54%), Gaps = 7/191 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEF+ S+V + P D LPE ALVGRSNVGKSSL+N ++ RK +A TS PGKTQ
Sbjct: 2 KITSAEFIISAVGPQQYPKDRLPEIALVGRSNVGKSSLINKMLSRKAIARTSSRPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N+F++N+ Y VD PGYGYA + +++ W Y R L V L+D
Sbjct: 62 LNYFKVNNQMYFVDFPGYGYAKVSKSIKSTWGGMIDAYLSKREELKFVVQLVDIRHAPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D+ + + IP +V TK DK + R ++L ++ + FQ+ I+
Sbjct: 122 EDVSMYEYCKELGIPTIVVATKGDKISR-----GRWLQHLKVIRQTLN--FQSTDALIVF 174
Query: 284 SSVTNQGRDEI 294
S+ QGRDE+
Sbjct: 175 STEMGQGRDEL 185
>gi|340029432|ref|ZP_08665495.1| GTP-binding protein YsxC [Paracoccus sp. TRP]
Length = 216
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 110/241 (45%), Gaps = 39/241 (16%)
Query: 50 ISHAVEPEPEPHVAISLEKLFVPPETEVSIDDSSLSTRILKGSNIVLSKYARDAQVAQAE 109
+S ++ PEP+P A + +LF P +
Sbjct: 3 VSFSLAPEPDPAEAEAARQLFAGP----------------------------------VD 28
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
F+K V + P+ PE GRSNVGKSSL+N+L RK LA S TPG+TQ IN+F++
Sbjct: 29 FLKGVVAMDGLPAADRPEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRTQEINYFKL 88
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
D YLVDLPGYG+A AP + W K Y R TL F LID+ K +D +
Sbjct: 89 GDRAYLVDLPGYGFAKAPVAVVAKWQALLKSYLSGRPTLRRAFALIDSRHGVKDVDHQIM 148
Query: 230 SWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQ 289
L + +P +V TK DK ++ + QE +Q P ++TSS
Sbjct: 149 QLLDRAAVPFQVVLTKADKITAQQLAA-----TIEQVQEALQKHPAAFPQLVVTSSDKGL 203
Query: 290 G 290
G
Sbjct: 204 G 204
>gi|339007536|ref|ZP_08640110.1| putative GTP-binding protein EngB [Brevibacillus laterosporus LMG
15441]
gi|338774739|gb|EGP34268.1| putative GTP-binding protein EngB [Brevibacillus laterosporus LMG
15441]
Length = 211
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 105/191 (54%), Gaps = 7/191 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEF+ S+V + P D LPE ALVGRSNVGKSSL+N ++ RK +A TS PGKTQ
Sbjct: 2 KITSAEFIISAVGPQQYPKDRLPEIALVGRSNVGKSSLINKMLSRKAIARTSSRPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N+F++N+ Y VD PGYGYA + +++ W Y R L V L+D
Sbjct: 62 LNYFKVNNQMYFVDFPGYGYAKVSKSIKSTWGGMIDAYLSKREELRFVVQLVDIRHAPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D+ + + IP +V TK DK + R ++L ++ + FQ+ I+
Sbjct: 122 EDVSMYEYCKELGIPTIVVATKGDKISR-----GRWLQHLKVIRQTLN--FQSTDALIVF 174
Query: 284 SSVTNQGRDEI 294
S+ QGRDE+
Sbjct: 175 STEMGQGRDEL 185
>gi|114765425|ref|ZP_01444540.1| GTP-binding protein [Pelagibaca bermudensis HTCC2601]
gi|114542268|gb|EAU45298.1| GTP-binding protein [Roseovarius sp. HTCC2601]
Length = 217
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 100/191 (52%), Gaps = 5/191 (2%)
Query: 100 ARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPG 159
AR + +F+K V + P D E GRSNVGKSSL+N+L RK +A S TPG
Sbjct: 20 ARKLFAGEVDFLKGVVGMDGLPPDDRVEVCFAGRSNVGKSSLINALTGRKGIARASNTPG 79
Query: 160 KTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASI 219
+TQ IN F + + YLVDLPGYG+A AP + W + K Y R +L F+LIDA
Sbjct: 80 RTQEINFFTLGEERYLVDLPGYGFANAPVAVVEKWQRLLKQYLSGRVSLRRAFVLIDARH 139
Query: 220 PAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPP 279
KP+D E + L ++ + V TK DK K+K E+ L +E + P
Sbjct: 140 GVKPVDEEIMTLLDRSAVTFQAVLTKADKVKEKGR-----EKVLAQVREKLAKHPAAFPE 194
Query: 280 WIMTSSVTNQG 290
++TSS G
Sbjct: 195 LVLTSSEKGDG 205
>gi|315038090|ref|YP_004031658.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
amylovorus GRL 1112]
gi|325956543|ref|YP_004291955.1| GTP-binding protein YsxC [Lactobacillus acidophilus 30SC]
gi|385817431|ref|YP_005853821.1| GTP-binding protein YsxC [Lactobacillus amylovorus GRL1118]
gi|312276223|gb|ADQ58863.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
amylovorus GRL 1112]
gi|325333108|gb|ADZ07016.1| GTP-binding protein YsxC [Lactobacillus acidophilus 30SC]
gi|327183369|gb|AEA31816.1| GTP-binding protein YsxC [Lactobacillus amylovorus GRL1118]
Length = 196
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 94/150 (62%), Gaps = 6/150 (4%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ + + S+V+ P D LPE AL GRSNVGKSSL+N+L++RK LA TS PGKTQ +
Sbjct: 3 IKSSSYAVSAVKESQYPKDNLPEIALAGRSNVGKSSLINTLLKRKNLARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + +ND +YLVD+PGYGYA ++ R ++ + +DY R L + +LID+
Sbjct: 63 NFYLVNDEFYLVDVPGYGYAKVSQKRRQEFGEMIQDYLETRPNLKGLIILIDSRHEPTKD 122
Query: 225 DL---EYASWLGQNQIPMTLVFTKCDKRKK 251
D+ EYA +L IP+ +V TK DK KK
Sbjct: 123 DIAMYEYAQYLN---IPILVVCTKMDKIKK 149
>gi|114567167|ref|YP_754321.1| GTP-binding protein [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114338102|gb|ABI68950.1| GTP-binding protein [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 219
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 84/147 (57%)
Query: 102 DAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
+ ++ +AE V P +PE AL GRSNVGKSSL+N + RK LA +S TPGKT
Sbjct: 28 ELKIKKAELEGIYVDINQLPVGNIPEIALAGRSNVGKSSLINKICNRKNLAKSSSTPGKT 87
Query: 162 QCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
+ IN++ IND W++VDLPGYGYA RE + W K + Y R L V L+D
Sbjct: 88 RTINYYLINDQWFMVDLPGYGYARVSREEKARWKKMVEAYLSQREQLRGVIQLLDIRHEP 147
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDK 248
D+ WL QIP+ +V TK DK
Sbjct: 148 GENDILMKDWLLHLQIPVLVVATKADK 174
>gi|219856299|ref|YP_002473421.1| hypothetical protein CKR_2956 [Clostridium kluyveri NBRC 12016]
gi|219570023|dbj|BAH08007.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 201
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 107/202 (52%), Gaps = 7/202 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ QAEF+ S+V P D E A VGRSNVGKSSL+N+L RKKL S TPGKT+
Sbjct: 6 EIKQAEFIISAVHPSQYPKDKRIEIAFVGRSNVGKSSLINALTNRKKLVKVSGTPGKTRL 65
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F IN+ +Y VDLPGYGYA + + W K +DY R L V LL+D
Sbjct: 66 INFFLINNEFYFVDLPGYGYAKISKTEKKSWGKVVEDYLRGREELKRVILLLDCRHKPTN 125
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D+ WL +V TK DK K + +NL ++ ++ +T +
Sbjct: 126 DDITMYKWLKYYNYNTIIVATKVDKVSK-----SQLFKNLKIIKDTLKP--ETGDEILTF 178
Query: 284 SSVTNQGRDEILLHMAQLRNYW 305
SS+ QG++E L + + +++
Sbjct: 179 SSLNKQGKEEFLKVLESVIDFY 200
>gi|333394690|ref|ZP_08476509.1| GTP-binding protein YsxC [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
gi|336392423|ref|ZP_08573822.1| GTP-binding protein YsxC [Lactobacillus coryniformis subsp.
torquens KCTC 3535]
gi|420145898|ref|ZP_14653345.1| Putative GTP-binding protein EngB [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
gi|398402428|gb|EJN55770.1| Putative GTP-binding protein EngB [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
Length = 195
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 106/191 (55%), Gaps = 7/191 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
Q+ E V S+V P+DGLPE AL GRSNVGKSS++N L++RKK+A TS TPGKTQ
Sbjct: 2 QIQDVELVISAVAPMQYPTDGLPEIALTGRSNVGKSSMINKLIQRKKMARTSSTPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +++ND++Y VD+PGYGYA ++ R + + + Y R L V LID
Sbjct: 62 LNFYKLNDAFYFVDVPGYGYAKVSKKDRESFSQMIETYLQERDNLRGVISLIDVRHEPTK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
DL +L +P+ +V TK DK + K + E L EL Q ++
Sbjct: 122 DDLAMYKYLQFFGVPVLVVATKGDKVPRGK--WNQRESKLKKALELNQ-----TDDLVVF 174
Query: 284 SSVTNQGRDEI 294
SS T G D+I
Sbjct: 175 SSTTGIGGDQI 185
>gi|393200096|ref|YP_006461938.1| GTPase [Solibacillus silvestris StLB046]
gi|406665862|ref|ZP_11073633.1| putative GTP-binding protein EngB [Bacillus isronensis B3W22]
gi|327439427|dbj|BAK15792.1| predicted GTPase [Solibacillus silvestris StLB046]
gi|405386381|gb|EKB45809.1| putative GTP-binding protein EngB [Bacillus isronensis B3W22]
Length = 193
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 86/150 (57%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V E + S VR E P DGLPEFAL GRSNVGKSS +N ++ RK +A S PGKTQ
Sbjct: 2 KVHNVEMIGSFVRPEQFPEDGLPEFALAGRSNVGKSSFINRMIGRKAMARISSKPGKTQQ 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N ++I + Y VD+PGYGYA + R W + + YF+ R L +V L++D
Sbjct: 62 LNFYKIEEQLYYVDVPGYGYAKVSKSERAAWGRMIEQYFMGREQLRAVVLIVDIRHNPTS 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D +L IP+ +V TK DK K K
Sbjct: 122 DDCMMYDFLKHYNIPVIVVATKADKIPKGK 151
>gi|149181759|ref|ZP_01860250.1| GTP-binding protein [Bacillus sp. SG-1]
gi|148850500|gb|EDL64659.1| GTP-binding protein [Bacillus sp. SG-1]
Length = 196
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 107/194 (55%), Gaps = 7/194 (3%)
Query: 101 RDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGK 160
R+ +V E V S+VR E P + LPEFAL GRSNVGKSS +N ++ RK +A S PGK
Sbjct: 2 REVKVNNVELVISAVRPEQYPGEFLPEFALAGRSNVGKSSFINRMIGRKSMARISSRPGK 61
Query: 161 TQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIP 220
TQ +N ++I +S Y VD+PGYG+A ++ R W + + Y R L +V ++D P
Sbjct: 62 TQTLNFYKIEESLYFVDVPGYGFAKVSKKEREAWGRMIETYITMREQLKAVIQIVDLRHP 121
Query: 221 AKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPW 280
D+ +L N IP ++ TK DK K K +++L +E + +
Sbjct: 122 PTEDDIMMYDFLKHNGIPCVIIATKADKIPKGK-----WQKHLKVTKEALD--IEEGDEI 174
Query: 281 IMTSSVTNQGRDEI 294
I+ SS T G+D++
Sbjct: 175 ILFSSETGLGKDQV 188
>gi|153955957|ref|YP_001396722.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium kluyveri
DSM 555]
gi|189037173|sp|A5N2K5.1|ENGB_CLOK5 RecName: Full=Probable GTP-binding protein EngB
gi|146348815|gb|EDK35351.1| EngB [Clostridium kluyveri DSM 555]
Length = 197
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 107/202 (52%), Gaps = 7/202 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ QAEF+ S+V P D E A VGRSNVGKSSL+N+L RKKL S TPGKT+
Sbjct: 2 EIKQAEFIISAVHPSQYPKDKRIEIAFVGRSNVGKSSLINALTNRKKLVKVSGTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F IN+ +Y VDLPGYGYA + + W K +DY R L V LL+D
Sbjct: 62 INFFLINNEFYFVDLPGYGYAKISKTEKKSWGKVVEDYLRGREELKRVILLLDCRHKPTN 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D+ WL +V TK DK K + +NL ++ ++ +T +
Sbjct: 122 DDITMYKWLKYYNYNTIIVATKVDKVSK-----SQLFKNLKIIKDTLKP--ETGDEILTF 174
Query: 284 SSVTNQGRDEILLHMAQLRNYW 305
SS+ QG++E L + + +++
Sbjct: 175 SSLNKQGKEEFLKVLESVIDFY 196
>gi|383754370|ref|YP_005433273.1| putative GTP-binding protein [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381366422|dbj|BAL83250.1| putative GTP-binding protein [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 207
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 108/200 (54%), Gaps = 17/200 (8%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ Q ++V S+V+ + P LPE +GRSNVGKSSL+NSL R LA S PGKTQ I
Sbjct: 7 ITQGQYVASAVKKDQYPEGDLPEIVFIGRSNVGKSSLINSLTRVNNLARVSSQPGKTQTI 66
Query: 165 NHFRIN---------DSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLI 215
N F + ++YLVDLPGYGYA +E R W KF ++Y LN L V LI
Sbjct: 67 NFFEVGVKIEEAEERKAFYLVDLPGYGYAKTGKEKRKIWSKFIEEYLLNSPRLSFVCQLI 126
Query: 216 DASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQ 275
D+ D+E +WL N +P+ ++ TK DK K + +N+ + +
Sbjct: 127 DSRHEPMASDVEMFNWLVDNGLPVLIIATKVDKIGKNERA-----KNIAAIKRKLGIKEI 181
Query: 276 TAPPWIMTSSVTNQGRDEIL 295
+ P+ SS+ N+GR ++L
Sbjct: 182 SVLPY---SSLKNEGRSDLL 198
>gi|354557899|ref|ZP_08977156.1| GTP-binding protein engB [Desulfitobacterium metallireducens DSM
15288]
gi|353549573|gb|EHC19014.1| GTP-binding protein engB [Desulfitobacterium metallireducens DSM
15288]
Length = 212
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 85/144 (59%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +AE+ S+V P PE AL GRSNVGKSSL+N + RK LA T TPGKT+ +
Sbjct: 3 IHKAEYTTSAVNRNQYPEHSEPEIALAGRSNVGKSSLINKFINRKNLARTGNTPGKTRML 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + IND++Y VDLPGYGYA +++ + W K +DYF R L +V ++D
Sbjct: 63 NFYHINDAFYFVDLPGYGYAKVSKDVHSQWGKMMEDYFSTRENLRAVIQIVDIRHKPSLE 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK 248
D E +L IP+ +V TK DK
Sbjct: 123 DQEMHGFLRIRGIPVLVVATKADK 146
>gi|89092189|ref|ZP_01165143.1| hypothetical protein MED92_05238 [Neptuniibacter caesariensis]
gi|89083277|gb|EAR62495.1| hypothetical protein MED92_05238 [Oceanospirillum sp. MED92]
Length = 218
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 86/157 (54%), Gaps = 1/157 (0%)
Query: 96 LSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTS 155
+S R A F KS+ + CP D E A GRSN GKSS +N+L KLA TS
Sbjct: 1 MSSDQRIVHYNSARFNKSAAKLHQCPEDIGAEVAFAGRSNAGKSSAINTLTNNGKLARTS 60
Query: 156 KTPGKTQCINHFRIN-DSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLL 214
KTPG+TQ IN F +N + LVDLPGYGYA P E++ W K +Y R L V L+
Sbjct: 61 KTPGRTQLINFFDLNLEGVRLVDLPGYGYAKVPVEMKVHWQKHLGEYLEKRQCLQGVVLV 120
Query: 215 IDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKK 251
+D P K D W +Q+P+ ++ TK DK KK
Sbjct: 121 MDIRHPMKEFDQMMVEWCENSQMPLHVLLTKADKLKK 157
>gi|256847018|ref|ZP_05552464.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
coleohominis 101-4-CHN]
gi|256715682|gb|EEU30657.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
coleohominis 101-4-CHN]
Length = 196
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 107/190 (56%), Gaps = 7/190 (3%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V + S+V + PS PE ALVGRSNVGKSSL N+L+ RK A TS PGKTQ +
Sbjct: 3 VNHVDLTISAVHPDQYPSTDYPEIALVGRSNVGKSSLTNALINRKNFAHTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + + D Y VD+PGYGYA ++ R ++ + ++Y RS L V +L+D
Sbjct: 63 NFYNVEDKLYFVDVPGYGYAKVSKKQREEFGQMIENYLTQRSQLRGVIMLVDGRHAPTAD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D++ WL ++P+ +V TK DK K + R ++ + D E FQ P ++ S
Sbjct: 123 DVQMYQWLAYYELPILVVATKIDKVKPSQ--FTRVQKLVKDKLE-----FQEKQPLVLFS 175
Query: 285 SVTNQGRDEI 294
+++ +G++++
Sbjct: 176 AMSKRGKEDV 185
>gi|381210507|ref|ZP_09917578.1| GTP-binding protein YsxC [Lentibacillus sp. Grbi]
Length = 193
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 94/162 (58%), Gaps = 2/162 (1%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V AE V S+V + P+D LPE AL GRSNVGKSS +N L++RK LA TS PGKTQ
Sbjct: 2 KVTDAEIVISAVSKKQYPNDRLPEIALAGRSNVGKSSFINRLIQRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN ++IN+ +Y D+PGYGYA ++ R W ++YF R TL + ++ D
Sbjct: 62 INFYKINNKFYFTDVPGYGYAKVSKKEREKWGAMMEEYFAMRDTLKACVMITDVRHEPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGG--KRPEENL 263
D+ +L ++P+ ++ TK DK K K KR E L
Sbjct: 122 DDVLMYDFLKYYELPVIVIATKLDKIAKGKRASHLKRTHETL 163
>gi|251798420|ref|YP_003013151.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp.
JDR-2]
gi|247546046|gb|ACT03065.1| small GTP-binding protein [Paenibacillus sp. JDR-2]
Length = 201
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 104/193 (53%), Gaps = 11/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ Q+EF+ S+VR P D LPE AL GRSNVGKSSL+N L+ RK LA TS PGKTQ
Sbjct: 2 KITQSEFIISAVRPSQYPVDALPEIALAGRSNVGKSSLINKLILRKNLARTSSQPGKTQQ 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N++R+ND Y VD PGYGYA + R + + + Y +R L L+ID
Sbjct: 62 LNYYRVNDMVYFVDFPGYGYAKVSKTQRELFGQMIETYIRDRKELKLQLLVIDMRHAPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP--PWI 281
D+ WL +P +V TK D K P+ + ++I+ + P +
Sbjct: 122 DDVLMYHWLKHYNVPTCIVCTKAD---------KIPKGKWDKHVKVIKETLEADPRDSLV 172
Query: 282 MTSSVTNQGRDEI 294
M SS T GR+++
Sbjct: 173 MFSSETGLGREKL 185
>gi|451818372|ref|YP_007454573.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451784351|gb|AGF55319.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 198
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 107/192 (55%), Gaps = 7/192 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +++FV S+V+ P D E A VGRSNVGKSS++N+L R KLA S+TPGKT+
Sbjct: 2 RIKKSDFVTSAVKKNQYPIDNRAEIAFVGRSNVGKSSIINALTNRNKLAKVSQTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F IND +YLVDLPGYGYA + + W K + Y +R L V LL+D+
Sbjct: 62 INFFIINDDFYLVDLPGYGYAKVSKSEKESWGKTIETYLTSREQLKRVVLLVDSRHKPTG 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D+ W+ + +V TK DK +N K+ E+ + + EL +
Sbjct: 122 DDILMYKWIKHFGYDVIIVATKSDKL--SRNELKKNEKIIKETLEL-----TSEDKLYFF 174
Query: 284 SSVTNQGRDEIL 295
SSV+ GRD+++
Sbjct: 175 SSVSKDGRDQLI 186
>gi|339624624|ref|ZP_08660413.1| GTP-binding protein YsxC [Fructobacillus fructosus KCTC 3544]
Length = 194
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 101/193 (52%), Gaps = 12/193 (6%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V E V S+V P DG PEFALVGRSNVGKSSL N+L+ RK A TS PGKTQ +
Sbjct: 3 VHNVEMVMSAVSPSQYPEDGRPEFALVGRSNVGKSSLTNTLINRKNFARTSGQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + + D+ Y VD+PGYGYA ++ R + + + Y R L V L+DA
Sbjct: 63 NFYSVEDALYFVDVPGYGYAKVSKKKREAFGQMIETYISTRKQLRGVISLVDARHKPSQE 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPP---WI 281
D+ WL IP+ LV TK DK + K LN + +I+ P +
Sbjct: 123 DIMMYQWLAYYNIPVLLVATKADKIARGK---------LNQSESIIKKAVDFDPSNSDFC 173
Query: 282 MTSSVTNQGRDEI 294
SSVT G++++
Sbjct: 174 FFSSVTKSGKEKV 186
>gi|254556940|ref|YP_003063357.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
plantarum JDM1]
gi|300768255|ref|ZP_07078160.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308180929|ref|YP_003925057.1| GTPase EngB [Lactobacillus plantarum subsp. plantarum ST-III]
gi|380032874|ref|YP_004889865.1| ribosome biogenesis GTPase, YsxC/EngB family [Lactobacillus
plantarum WCFS1]
gi|418275670|ref|ZP_12890993.1| ribosome biogenesis GTPase, YsxC/EngB family [Lactobacillus
plantarum subsp. plantarum NC8]
gi|448821641|ref|YP_007414803.1| putative GTP-binding protein EngB [Lactobacillus plantarum ZJ316]
gi|38257507|sp|Q88VE3.1|ENGB_LACPL RecName: Full=Probable GTP-binding protein EngB
gi|254045867|gb|ACT62660.1| GTPase EngB [Lactobacillus plantarum JDM1]
gi|300494319|gb|EFK29482.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308046420|gb|ADN98963.1| GTPase EngB [Lactobacillus plantarum subsp. plantarum ST-III]
gi|342242117|emb|CCC79351.1| ribosome biogenesis GTPase, YsxC/EngB family [Lactobacillus
plantarum WCFS1]
gi|376009221|gb|EHS82550.1| ribosome biogenesis GTPase, YsxC/EngB family [Lactobacillus
plantarum subsp. plantarum NC8]
gi|448275138|gb|AGE39657.1| putative GTP-binding protein EngB [Lactobacillus plantarum ZJ316]
Length = 197
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 101/193 (52%), Gaps = 11/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V E V S+V P+ G PE L GRSNVGKSSL+N L+ R A TS PGKTQ
Sbjct: 2 EVHNVELVMSAVAPSQYPTTGFPEIGLAGRSNVGKSSLINVLINRNSYARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +++ D Y VD+PGYGYA ++ R W + + Y +R TL V +L+DA
Sbjct: 62 LNFYKVEDQLYFVDVPGYGYAKVSKKEREKWGQMIETYLTSRETLRGVVILVDARHAPTK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWI 281
D+ W+ ++P+ +V TK D K P N + LI+ FQ +I
Sbjct: 122 DDVAMYEWMRYYEMPLLVVATKSD---------KIPRGKWNKQESLIKKTLNFQAEDDFI 172
Query: 282 MTSSVTNQGRDEI 294
S+ T +G+D +
Sbjct: 173 AFSAKTKEGKDAV 185
>gi|408374776|ref|ZP_11172459.1| GTP-binding protein [Alcanivorax hongdengensis A-11-3]
gi|407765435|gb|EKF73889.1| GTP-binding protein [Alcanivorax hongdengensis A-11-3]
Length = 214
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 86/144 (59%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA F++S+ R + CP+D E A GRSN GKSS +N L ++ LA TSKTPG+TQ +N
Sbjct: 12 QARFLQSAQRLDQCPADEGLEVAFAGRSNAGKSSAINRLTSQRTLARTSKTPGRTQLLNF 71
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F +++ LVDLPGYGYA + R +W + Y R LV + L++D P K DL
Sbjct: 72 FELDEHRRLVDLPGYGYAKVAKTKRNEWQQHLDHYLAERQALVGLVLMMDIRHPLKDFDL 131
Query: 227 EYASWLGQNQIPMTLVFTKCDKRK 250
W Q ++P+ ++ TK DK K
Sbjct: 132 LMLEWSAQAEMPIHILMTKADKLK 155
>gi|119369275|sp|Q0AWF4.2|ENGB_SYNWW RecName: Full=Probable GTP-binding protein EngB
Length = 193
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 84/147 (57%)
Query: 102 DAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
+ ++ +AE V P +PE AL GRSNVGKSSL+N + RK LA +S TPGKT
Sbjct: 2 ELKIKKAELEGIYVDINQLPVGNIPEIALAGRSNVGKSSLINKICNRKNLAKSSSTPGKT 61
Query: 162 QCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
+ IN++ IND W++VDLPGYGYA RE + W K + Y R L V L+D
Sbjct: 62 RTINYYLINDQWFMVDLPGYGYARVSREEKARWKKMVEAYLSQREQLRGVIQLLDIRHEP 121
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDK 248
D+ WL QIP+ +V TK DK
Sbjct: 122 GENDILMKDWLLHLQIPVLVVATKADK 148
>gi|326803637|ref|YP_004321455.1| ribosome biogenesis GTP-binding protein YsxC [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650781|gb|AEA00964.1| ribosome biogenesis GTP-binding protein YsxC [Aerococcus urinae
ACS-120-V-Col10a]
Length = 200
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
Q EF+ S+ + P PE AL GRSNVGKSS +N++ KK+A S PGKTQ
Sbjct: 3 QAQNIEFMLSAASPKQYPVSDRPEIALAGRSNVGKSSFINTMTNHKKIARISSKPGKTQQ 62
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N++ +++S YLVD+PGYGYA + R+ W K DYF+ R L +VFLL+D
Sbjct: 63 LNYYNLDNSLYLVDVPGYGYAKVSKTERSRWQKQLADYFIQRENLEAVFLLVDFRHRPSK 122
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK--NGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+ +L Q Q+P ++ TK DK KK + N + +E+L+ T +
Sbjct: 123 DDINMKDFLDQCQVPYFIIATKADKVKKNQWHNHLQAIKEDLD---------LVTEDQIL 173
Query: 282 MTSSVTNQGRDE 293
SS +GRDE
Sbjct: 174 PYSSANREGRDE 185
>gi|415884183|ref|ZP_11546212.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus methanolicus
MGA3]
gi|387591978|gb|EIJ84295.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus methanolicus
MGA3]
Length = 193
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 92/150 (61%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AE V S+V+ + PS+ LPEFAL GRSNVGKSS +N ++ RK LA TS PGKTQ
Sbjct: 2 KINSAEIVISAVKPDQYPSEALPEFALAGRSNVGKSSFINKMLNRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IN++++ VD+PGYGYA + R W + + YF +R L +V L++D
Sbjct: 62 LNFYLINEAFHFVDVPGYGYAKVSKSERAAWGEMIETYFTSREQLKAVILIVDFRHEPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D+ +L +IP ++ TK DK K K
Sbjct: 122 DDVMMYDFLKHYEIPCIVIATKADKIPKGK 151
>gi|339504813|ref|YP_004692233.1| GTP-binding protein EngB [Roseobacter litoralis Och 149]
gi|338758806|gb|AEI95270.1| putative GTP-binding protein EngB [Roseobacter litoralis Och 149]
Length = 216
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 96/185 (51%), Gaps = 5/185 (2%)
Query: 106 AQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCIN 165
+ EFVK V P E GRSNVGKSSL+N+L RK LA S TPG+TQ IN
Sbjct: 25 GETEFVKGVVAMSGLPDPDRMEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRTQEIN 84
Query: 166 HFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPID 225
F +S YLVDLPGYGYA AP + W + K Y R TL F+LIDA AK +D
Sbjct: 85 FFTAGESHYLVDLPGYGYANAPVPVVEKWQRLLKQYLSGRQTLRRAFVLIDARHGAKKVD 144
Query: 226 LEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSS 285
E S L + +V TK DK K+K+ E+ L+ + + P ++TSS
Sbjct: 145 EEILSLLDSAAVTFQVVLTKADKVKEKER-----EKVLDQVRNALSKHPAAFPELVVTSS 199
Query: 286 VTNQG 290
G
Sbjct: 200 EKGWG 204
>gi|342214203|ref|ZP_08706904.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp. oral
taxon 780 str. F0422]
gi|341594434|gb|EGS37123.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp. oral
taxon 780 str. F0422]
Length = 230
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 107/207 (51%), Gaps = 21/207 (10%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A+++ S+V+ + P E A +GRSNVGKSSL+NSL + LAL S TPGKT+
Sbjct: 24 RIIAAKYIASAVKADQYPEGDTIEIAFLGRSNVGKSSLINSLCNYRGLALVSGTPGKTKT 83
Query: 164 INHFRIND------------SWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSV 211
IN F I W+LVDLPGYGYA W F +Y L ++ +
Sbjct: 84 INFFSIESKEDLPDDMERRFDWFLVDLPGYGYAKTGGSNTNIWSSFIANYILQSERMMLL 143
Query: 212 FLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQ 271
LLID P PID E WL + +P+ +V TK DK K + ++ L +E
Sbjct: 144 CLLIDGRHPELPIDQEAFDWLQSHGVPLQIVVTKADKLKMNER-----QKQLKTIEER-- 196
Query: 272 GFFQTAPPWIMTSSVTNQGRDEILLHM 298
+ T P I+ SS+ + GRD +L +
Sbjct: 197 --YPTGYPPILYSSLKHTGRDRLLARI 221
>gi|116621147|ref|YP_823303.1| small GTP-binding protein [Candidatus Solibacter usitatus
Ellin6076]
gi|122254883|sp|Q026Q1.1|ENGB_SOLUE RecName: Full=Probable GTP-binding protein EngB
gi|116224309|gb|ABJ83018.1| small GTP-binding protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 191
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 86/142 (60%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+AEFV SS + + PSD LPE A +GRSNVGKSSL+N+L KKLA TS TPG+TQ IN
Sbjct: 5 KAEFVVSSGKPDTFPSDRLPEIAFLGRSNVGKSSLINALTGHKKLAFTSNTPGRTQTINF 64
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
+R+++ +YLVDLPGYGYA P W + Y R TL L++D DL
Sbjct: 65 YRVDEKFYLVDLPGYGYARVPAGFAEQWKVLIEHYLEFRETLKFSCLILDTRRGWMEKDL 124
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
+ WL + P +V TK DK
Sbjct: 125 DLKRWLDHHGRPYLVVATKTDK 146
>gi|152976884|ref|YP_001376401.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cytotoxicus
NVH 391-98]
gi|189037170|sp|A7GTE8.1|ENGB_BACCN RecName: Full=Probable GTP-binding protein EngB
gi|152025636|gb|ABS23406.1| small GTP-binding protein [Bacillus cytotoxicus NVH 391-98]
Length = 198
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 87/150 (58%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +AE V S+VR + P LPE AL GRSNVGKSS +N+++ RKKL S PGKTQ
Sbjct: 2 KVTKAEIVISAVRPDQYPGGDLPEIALAGRSNVGKSSFINTILNRKKLVRISSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N F IND + VD+PGYGYA + R W K + YF R L + L+ID P
Sbjct: 62 LNFFIINDMMHFVDVPGYGYAKVSKSERAAWGKMIETYFTTREQLDATVLVIDLRHPPTK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D+ +L +IP ++ TK DK K K
Sbjct: 122 DDVMMYDFLKHYEIPTIIIATKADKIPKGK 151
>gi|329114453|ref|ZP_08243215.1| Putative GTP-binding protein EngB [Acetobacter pomorum DM001]
gi|326696529|gb|EGE48208.1| Putative GTP-binding protein EngB [Acetobacter pomorum DM001]
Length = 227
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 112/224 (50%), Gaps = 7/224 (3%)
Query: 80 DDSSLSTRILKGSNIVLS--KYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVG 137
DD++ S R LK + + + R EFV + R P LPE A GRSNVG
Sbjct: 3 DDAASSFRELKDEARIAAALEEGRRLFAGSCEFVFGAQRLGQLPPQTLPEIAFAGRSNVG 62
Query: 138 KSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKF 197
KSSL+N+L RK LA S PG+T+ +N F + D LVD+PGYGYA A + ++ DW
Sbjct: 63 KSSLVNALTGRKTLARASSEPGRTKQLNFFNLADRLMLVDMPGYGYAKAAKSVKEDWQDM 122
Query: 198 TKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGK 257
DY R +L V LL+DA + K DLE L + + +V TKCD K K
Sbjct: 123 MFDYLRGRPSLQRVVLLLDARVEMKAHDLEVMDLLDKAAVSFQVVLTKCDSVKPGPLARK 182
Query: 258 RPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQL 301
+ E + I+ P +TSS T +G + + +A+
Sbjct: 183 QAE-----VEAEIRRHPAAFPYLSLTSSQTGEGIEGLRAELAEF 221
>gi|404495322|ref|YP_006719428.1| GTP-binding protein YsxC [Geobacter metallireducens GS-15]
gi|418067208|ref|ZP_12704557.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter
metallireducens RCH3]
gi|119369199|sp|Q39YG6.1|ENGB_GEOMG RecName: Full=Probable GTP-binding protein EngB
gi|78192941|gb|ABB30708.1| GTPase EngB [Geobacter metallireducens GS-15]
gi|373559209|gb|EHP85515.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter
metallireducens RCH3]
Length = 204
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 84/150 (56%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V+ AEFV S R P LPE A GRSNVGKSSL+N LV RK L TS TPG+TQ
Sbjct: 2 KVSSAEFVTSGTRPAHYPPPELPEVAFAGRSNVGKSSLINVLVNRKGLVRTSSTPGRTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN FR+N S LVDLPGYG+A P ++ +W + Y R L V L++D
Sbjct: 62 INFFRVNGSLMLVDLPGYGFAKVPLAVKKEWGPMVETYLSTRPNLSCVVLIVDIRREPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D WL + + +V TKCDK K +
Sbjct: 122 EDQLMLQWLRAYNVAVLVVVTKCDKVSKNE 151
>gi|116618614|ref|YP_818985.1| ribosome biogenesis GTP-binding protein YsxC [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
gi|227432007|ref|ZP_03914027.1| GTPase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
gi|381336988|ref|YP_005174763.1| GTP-binding protein YsxC [Leuconostoc mesenteroides subsp.
mesenteroides J18]
gi|122271186|sp|Q03W10.1|ENGB_LEUMM RecName: Full=Probable GTP-binding protein EngB
gi|116097461|gb|ABJ62612.1| Predicted GTPase [Leuconostoc mesenteroides subsp. mesenteroides
ATCC 8293]
gi|227352292|gb|EEJ42498.1| GTPase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
gi|356644954|gb|AET30797.1| GTP-binding protein YsxC [Leuconostoc mesenteroides subsp.
mesenteroides J18]
Length = 194
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 100/193 (51%), Gaps = 12/193 (6%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V E V S+V P+DG PE ALVGRSNVGKSSL N+L++RK A TS PGKTQ +
Sbjct: 3 VHNVEMVMSAVSASQYPTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + + D Y VD+PGYGYA + R + ++Y +R L V L+DA
Sbjct: 63 NFYDVEDKLYFVDVPGYGYAKVSKAQREAFGVMIEEYITSRKQLRGVISLVDARHEPSED 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQ---GFFQTAPPWI 281
D+ WL IP+ +V TK DK + K N + +I+ GF +
Sbjct: 123 DISMYEWLHYYNIPILVVATKSDKISRGK---------FNKAESVIKKALGFDNEDSDFQ 173
Query: 282 MTSSVTNQGRDEI 294
SS T G+DE+
Sbjct: 174 FFSSETKYGKDEV 186
>gi|15615611|ref|NP_243915.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus halodurans
C-125]
gi|13124217|sp|Q9K8F7.1|ENGB_BACHD RecName: Full=Probable GTP-binding protein EngB
gi|10175671|dbj|BAB06768.1| GTP-binding protein [Bacillus halodurans C-125]
Length = 194
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 107/191 (56%), Gaps = 9/191 (4%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +AE +V+ E P+ LPE AL GRSNVGKSS +N ++ RKKLA TS+ PGKTQ
Sbjct: 2 KVTKAELDCVAVKPEQYPNSPLPEVALAGRSNVGKSSFINKMINRKKLARTSQRPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDA-SIPAK 222
+N + IND + VD+PGYG+A ++ R W + + Y R L +V +ID P K
Sbjct: 62 LNFYNINDILHFVDVPGYGFAKVSKKDREAWGRMIETYLQQRGQLKAVLQIIDIRHDPTK 121
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
L Y WL +IP+ ++ TKCDK K GK P+ N L + P ++
Sbjct: 122 DDQLMY-DWLKHFEIPVIIIATKCDKIPK----GKWPKHVKNIASVLEK---DGGDPIVI 173
Query: 283 TSSVTNQGRDE 293
SS T G+DE
Sbjct: 174 FSSETGVGKDE 184
>gi|373857606|ref|ZP_09600347.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus sp. 1NLA3E]
gi|372452738|gb|EHP26208.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus sp. 1NLA3E]
Length = 194
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 90/150 (60%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V AE + S+V+ E P +PEFAL GRSNVGKSS +N ++ RK LA TS PGKTQ
Sbjct: 2 KVNNAEIIISAVKPEQYPGGIMPEFALAGRSNVGKSSFINKMLNRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IN+ ++ VD+PGYGYA + R W K + Y +R L +V L++D P
Sbjct: 62 LNFYLINEQFHFVDVPGYGYAKVSKSEREAWGKMLEIYITSREQLRAVLLIVDLRHPPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D+ +L QIP+ ++ TK DK K K
Sbjct: 122 DDVLMYDFLKHYQIPVIVIATKADKIPKSK 151
>gi|119503604|ref|ZP_01625687.1| GTP-binding protein EngB [marine gamma proteobacterium HTCC2080]
gi|119460666|gb|EAW41758.1| GTP-binding protein EngB [marine gamma proteobacterium HTCC2080]
Length = 221
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 88/144 (61%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A F++S+ + PSD E A GRSN GKSS +N+L +KLA TS+TPG+TQ IN F
Sbjct: 19 ASFMQSASSLGNAPSDTGSEVAFAGRSNAGKSSAINTLTSNRKLARTSRTPGRTQLINFF 78
Query: 168 RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
++DS LVDLPGYGYA P +++ +W++ DY R +L + LL+D P D +
Sbjct: 79 SLSDSQRLVDLPGYGYAKVPLKMKQEWNRHMADYLQRRESLRGLILLMDIRHPLTDADEQ 138
Query: 228 YASWLGQNQIPMTLVFTKCDKRKK 251
W + Q+P+ + TK DK K+
Sbjct: 139 MIGWASKAQMPIHALLTKADKLKR 162
>gi|329121866|ref|ZP_08250481.1| ribosome biogenesis GTP-binding protein YsxC [Dialister
micraerophilus DSM 19965]
gi|327467804|gb|EGF13296.1| ribosome biogenesis GTP-binding protein YsxC [Dialister
micraerophilus DSM 19965]
Length = 213
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 104/197 (52%), Gaps = 20/197 (10%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
+VKS+V + D E A +GRSNVGKSSL+NSL KKLA S+ PGKT+ IN++ +
Sbjct: 17 YVKSAVNAKQYAEDEYVEIAFIGRSNVGKSSLINSLCGNKKLARVSREPGKTRTINYYAV 76
Query: 170 N-----------DSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDAS 218
WYLVDLPGYG+A ++ + W F DY L+ + LL+D
Sbjct: 77 QSRKAINEEEERQDWYLVDLPGYGFAKTSQKNKDMWSSFISDYIYKSEKLILICLLVDLR 136
Query: 219 IPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP 278
P +D++ WL + + + ++ TK DK G +NL +++ FQ
Sbjct: 137 HPGLAMDMKAYEWLVNSGVDVQIIATKADKL-----GNNEKRKNLAQVKKI----FQLKN 187
Query: 279 PWIMTSSVTNQGRDEIL 295
P I SS+ N+GR E+L
Sbjct: 188 PPIAYSSLKNEGRKELL 204
>gi|125973114|ref|YP_001037024.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
thermocellum ATCC 27405]
gi|256003908|ref|ZP_05428894.1| GTP-binding protein HSR1-related protein [Clostridium thermocellum
DSM 2360]
gi|281417306|ref|ZP_06248326.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
thermocellum JW20]
gi|385778980|ref|YP_005688145.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
thermocellum DSM 1313]
gi|419723004|ref|ZP_14250139.1| GTP-binding protein engB [Clostridium thermocellum AD2]
gi|419725092|ref|ZP_14252147.1| GTP-binding protein engB [Clostridium thermocellum YS]
gi|125713339|gb|ABN51831.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
thermocellum ATCC 27405]
gi|255992036|gb|EEU02132.1| GTP-binding protein HSR1-related protein [Clostridium thermocellum
DSM 2360]
gi|281408708|gb|EFB38966.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
thermocellum JW20]
gi|316940660|gb|ADU74694.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
thermocellum DSM 1313]
gi|380771712|gb|EIC05577.1| GTP-binding protein engB [Clostridium thermocellum YS]
gi|380780771|gb|EIC10434.1| GTP-binding protein engB [Clostridium thermocellum AD2]
Length = 207
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 104/187 (55%), Gaps = 7/187 (3%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A F ++VR E P + LPE VGRSNVGKSSL+N+++ RK LA + TPG+T+ IN +
Sbjct: 12 ARFEITAVRPEQYPKNDLPEITFVGRSNVGKSSLINTMLNRKNLAKVAATPGRTRVINFY 71
Query: 168 RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
I+D Y VDLPGYG+A P+ ++T W + Y + R L V +L+D D+
Sbjct: 72 NIDDKLYFVDLPGYGFAKVPKTMKTGWKDIIETYLIERKQLKKVIMLVDIRHSPTSDDVL 131
Query: 228 YASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVT 287
WL + +V TK DK + K +E ++D + +++ + I SS T
Sbjct: 132 MHEWLKAMRKSYVVVATKLDKIPRTK-----IKERISDIRSILK--LEDDVKIIPFSSET 184
Query: 288 NQGRDEI 294
QGRDE+
Sbjct: 185 RQGRDEL 191
>gi|347753757|ref|YP_004861321.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Candidatus
Chloracidobacterium thermophilum B]
gi|347586275|gb|AEP10805.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Candidatus
Chloracidobacterium thermophilum B]
Length = 205
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 87/150 (58%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V A F+KS+ + P LPE A +GRSNVGKSSL+NSL+ + LA TS+TPG+TQ
Sbjct: 2 KVVAATFLKSATAAAEYPPPTLPEVAFLGRSNVGKSSLINSLLGMRGLARTSQTPGRTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F IN VDLPGYGYA P+ +R W + Y RS L L++DA + +P
Sbjct: 62 INFFEINRELRFVDLPGYGYARVPQAVRERWRPMIEGYLNRRSALALCVLIVDARLEPQP 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
+DL WL +V TK DK + +
Sbjct: 122 LDLTMYEWLAAMSRRFCVVATKADKLSRSQ 151
>gi|408790465|ref|ZP_11202084.1| GTP-binding protein EngB [Lactobacillus florum 2F]
gi|408520189|gb|EKK20277.1| GTP-binding protein EngB [Lactobacillus florum 2F]
Length = 200
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 95/191 (49%), Gaps = 7/191 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V + V S+V P+ G PE +GRSNVGKSSL N L+ RK A TS PGKTQ
Sbjct: 2 KVTDVQLVMSAVSPAQYPTTGYPEIGFLGRSNVGKSSLTNVLIERKDYAHTSGQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + +N Y VD+PGYGYA ++ R W + + Y RSTL V LID+
Sbjct: 62 LNFYELNHKLYFVDVPGYGYAKVSKQAREKWAEMIETYLTQRSTLAGVVNLIDSRHALSD 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D + WL QIP V TK DK K K + D Q+ Q +M
Sbjct: 122 YDRQMHDWLAYYQIPTLYVATKMDKLAKSK-----VKAQAKDLQQ--QLHLTADQSLVMF 174
Query: 284 SSVTNQGRDEI 294
S+ T QG EI
Sbjct: 175 SAKTKQGAPEI 185
>gi|114770123|ref|ZP_01447661.1| GTP-binding protein [Rhodobacterales bacterium HTCC2255]
gi|114548960|gb|EAU51843.1| GTP-binding protein [alpha proteobacterium HTCC2255]
Length = 216
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 102/182 (56%), Gaps = 5/182 (2%)
Query: 109 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFR 168
+F+K V + P E GRSNVGKSSL+N+L RK LA TS TPG+TQ IN F
Sbjct: 28 DFLKGVVGMDGMPPADRMEVCFAGRSNVGKSSLINALTGRKSLARTSNTPGRTQEINFFT 87
Query: 169 INDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEY 228
+++S YLVD+PGYG+A AP + W K Y R++L VFLLID+ K +D E
Sbjct: 88 LSESHYLVDVPGYGFANAPLPVVKKWQTLLKAYLSGRASLRRVFLLIDSRHGVKSVDEEI 147
Query: 229 ASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTN 288
LG++ + +V TK DK KK E+ +++ ++ + P +++TSS
Sbjct: 148 MELLGRSAVTFQVVLTKSDKPKKND-----LEKVISETGRIVAKYPAAYPEFVLTSSEKG 202
Query: 289 QG 290
G
Sbjct: 203 DG 204
>gi|304322174|ref|YP_003855817.1| GTP-binding protein [Parvularcula bermudensis HTCC2503]
gi|303301076|gb|ADM10675.1| GTP-binding protein [Parvularcula bermudensis HTCC2503]
Length = 213
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 98/198 (49%), Gaps = 5/198 (2%)
Query: 93 NIVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLA 152
N LS+ AR +F+ P LPEFA GRSNVGKSSL+N L RK LA
Sbjct: 7 NTALSEDARKLFRGDCQFMLGVTTMAALPPPDLPEFAFAGRSNVGKSSLINRLTGRKALA 66
Query: 153 LTSKTPGKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVF 212
TS TPG+T+ +N F + LVDLPGYGYA A R W T+D+ R L V
Sbjct: 67 RTSNTPGRTRELNFFDLGGRLRLVDLPGYGYAKASRSAVESWTGLTRDFLRGRPNLRRVH 126
Query: 213 LLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQG 272
+L+D+ KP+D E S L ++ +P LV TK DK K + + E I
Sbjct: 127 ILVDSRHGLKPVDEETMSLLDESAVPYQLVLTKIDKIKPTE-----AARRIKAVGEAIGR 181
Query: 273 FFQTAPPWIMTSSVTNQG 290
P I TSS T G
Sbjct: 182 RPAAHPDIIATSSETGDG 199
>gi|452752316|ref|ZP_21952059.1| GTP-binding protein EngB [alpha proteobacterium JLT2015]
gi|451960392|gb|EMD82805.1| GTP-binding protein EngB [alpha proteobacterium JLT2015]
Length = 230
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 110/210 (52%), Gaps = 7/210 (3%)
Query: 91 GSNIVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKK 150
G + ++YARD + A F S + P DG+PE A GRSNVGKSSLLN+L +
Sbjct: 20 GVSAGAARYARDLFKSGAHFSMSVGHLDQLPEDGVPEIAFAGRSNVGKSSLLNALCAQHG 79
Query: 151 LALTSKTPGKTQCINHFRIND--SWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTL 208
LA TS TPG+TQ +N F + LVD+PGYG+A AP+++ W + DY R TL
Sbjct: 80 LARTSNTPGRTQLLNLFPVGKPPELRLVDMPGYGFAKAPKKVVDQWKRLVFDYLRGRPTL 139
Query: 209 VSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQE 268
V LLID K +DL+ + L + + +V TK DK K+ N+ +
Sbjct: 140 RRVMLLIDVRRGIKDVDLDVMAMLDEAAVTYQIVLTKGDKVKQTG-----AAWNVAEAGR 194
Query: 269 LIQGFFQTAPPWIMTSSVTNQGRDEILLHM 298
I P + TS+ N+G DE+ + M
Sbjct: 195 QIARRPAAFPLVLATSAEKNEGLDELRVAM 224
>gi|320353916|ref|YP_004195255.1| ribosome biogenesis GTP-binding protein YsxC [Desulfobulbus
propionicus DSM 2032]
gi|320122418|gb|ADW17964.1| ribosome biogenesis GTP-binding protein YsxC [Desulfobulbus
propionicus DSM 2032]
Length = 209
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 97/188 (51%), Gaps = 8/188 (4%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+ +F+ S+ P+ P+ A GRSNVGKSSLLN LV R L TS PGKTQ +N+
Sbjct: 6 KVQFLLSAHAIGQLPAPVYPDIAFAGRSNVGKSSLLNRLVDRSNLVKTSSKPGKTQSLNY 65
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + +S YLVDLPGYGYA ++ R W +Y RSTL V ++ID K +D
Sbjct: 66 FLVEESLYLVDLPGYGYAQVSQQTRQSWQGLITEYVTTRSTLACVVVIIDLRHELKQLDR 125
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSV 286
E WL P V+TK DK + + + + L G TA I+ SS
Sbjct: 126 ELVDWLRYLDTPYLPVYTKADKLSR--------NQQMKNAAALDAGLTLTADDRIIFSSS 177
Query: 287 TNQGRDEI 294
T QG D +
Sbjct: 178 TGQGLDSL 185
>gi|404369993|ref|ZP_10975320.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium sp.
7_2_43FAA]
gi|226913876|gb|EEH99077.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium sp.
7_2_43FAA]
Length = 201
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 108/195 (55%), Gaps = 12/195 (6%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ ++FV S+V+ E P GLPE A VGRSNVGKSS++N+L RKKLA S+TPGKT+
Sbjct: 3 KIKNSDFVISAVKKEQYPITGLPEIAFVGRSNVGKSSIINALTNRKKLAKVSQTPGKTRL 62
Query: 164 INHFRIN-DSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAK 222
IN F IN D +YLVDLPGYGYA + + W K + Y R L V LL+D+
Sbjct: 63 INFFIINGDEFYLVDLPGYGYAKVSKTEKASWGKTIETYLNGRQELKRVVLLVDSRHKPT 122
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPW 280
D++ W+ ++ TK DK + + K E LN +E FF
Sbjct: 123 ADDIQMHEWIKFYGYDEVVIATKSDKLSNNELRKSEKVIRETLNLGKEDKLYFF------ 176
Query: 281 IMTSSVTNQGRDEIL 295
SS+ +G+DE++
Sbjct: 177 ---SSLNKKGKDELV 188
>gi|408356356|ref|YP_006844887.1| GTPase [Amphibacillus xylanus NBRC 15112]
gi|407727127|dbj|BAM47125.1| GTPase [Amphibacillus xylanus NBRC 15112]
Length = 194
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 91/150 (60%), Gaps = 4/150 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V Q+EF S+V P++ LPE AL GRSNVGKSS +N ++ RK LA TS PGKTQ
Sbjct: 2 KVTQSEFTISAVSPNQYPTENLPEIALAGRSNVGKSSFINKMINRKALARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N++ IN+ +Y VD+PGYGYA + R W K + YF R L + L++D I KP
Sbjct: 62 LNYYLINEFFYFVDVPGYGYAKVSKTEREAWGKMMETYFSEREPLRATILVVD--IRHKP 119
Query: 224 I--DLEYASWLGQNQIPMTLVFTKCDKRKK 251
D+ +L IP+ ++ TK DK KK
Sbjct: 120 TNDDVMMYDFLKHYDIPVIIIATKLDKIKK 149
>gi|325570036|ref|ZP_08145961.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus
casseliflavus ATCC 12755]
gi|325156864|gb|EGC69035.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus
casseliflavus ATCC 12755]
Length = 200
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 104/192 (54%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +AE V S+V P LPE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ
Sbjct: 8 KVHEAEIVISAVSPAQYPDTPLPEIALAGRSNVGKSSFINTLINRKNLARTSSKPGKTQT 67
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + I ++ + VD+PGYGYA + R W K + Y R L +V L+D
Sbjct: 68 LNFYLIENTLHFVDVPGYGYAKVSKTERAKWGKMIETYLEQREQLRAVVSLVDLRHAPSQ 127
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWI 281
D++ +L +IP+ +V TK D K P N + +I+ F A +I
Sbjct: 128 EDVQMYEFLKYYEIPVIVVATKAD---------KIPRGKWNKHESMIKKALSFDPADTFI 178
Query: 282 MTSSVTNQGRDE 293
+ SS+T QG++E
Sbjct: 179 LFSSITKQGKEE 190
>gi|407800539|ref|ZP_11147399.1| GTP-binding protein [Oceaniovalibus guishaninsula JLT2003]
gi|407057458|gb|EKE43434.1| GTP-binding protein [Oceaniovalibus guishaninsula JLT2003]
Length = 214
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 102/197 (51%), Gaps = 6/197 (3%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
Q EF+K V P E GRSNVGKSSL+N+L R+ LA S TPG+TQ +
Sbjct: 23 AGQTEFLKGVVAMSGLPPADRAEVCFAGRSNVGKSSLINALTGRRGLARASNTPGRTQEV 82
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F D YLVDLPGYG+A AP ++ W + KDY RSTL FLLIDA AK +
Sbjct: 83 NFFTAGD-IYLVDLPGYGFANAPVKVVQTWQRLMKDYLSGRSTLRRAFLLIDARHGAKAV 141
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E + L ++ + V TK DK + G L+ + + P ++TS
Sbjct: 142 DEEIMALLDRSAVTFQAVMTKIDKPR-----GDDLRRALDVTRAALARHPAAFPEIVLTS 196
Query: 285 SVTNQGRDEILLHMAQL 301
S T QG D + +A L
Sbjct: 197 SETGQGIDTLRGLIATL 213
>gi|300725096|ref|YP_003714424.1| GTPase [Xenorhabdus nematophila ATCC 19061]
gi|297631641|emb|CBJ92354.1| putative GTPase with nucleoside triP hydrolase domain, involved in
coordination of cell cycle [Xenorhabdus nematophila ATCC
19061]
Length = 200
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 82/139 (58%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
FV S+ P D E A GRSN GKSS LN+L R+K LA TSKTPG+TQ IN F +
Sbjct: 4 FVTSAPDIRHLPQDVGIEVAFAGRSNAGKSSALNALTRQKSLARTSKTPGRTQLINLFEV 63
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
D LVDLPGYGYA P E++ W K +Y R L+ + +L+D P K +D++
Sbjct: 64 EDGIRLVDLPGYGYAEVPEEMKRKWQKALGEYLQKRECLLGLVVLMDIRHPLKDLDMQMI 123
Query: 230 SWLGQNQIPMTLVFTKCDK 248
W Q+P+ ++ TK DK
Sbjct: 124 EWAVVMQVPVMVLLTKADK 142
>gi|257865955|ref|ZP_05645608.1| GTP-binding protein [Enterococcus casseliflavus EC30]
gi|257872288|ref|ZP_05651941.1| GTP-binding protein [Enterococcus casseliflavus EC10]
gi|257875582|ref|ZP_05655235.1| GTP-binding protein [Enterococcus casseliflavus EC20]
gi|257799889|gb|EEV28941.1| GTP-binding protein [Enterococcus casseliflavus EC30]
gi|257806452|gb|EEV35274.1| GTP-binding protein [Enterococcus casseliflavus EC10]
gi|257809748|gb|EEV38568.1| GTP-binding protein [Enterococcus casseliflavus EC20]
Length = 194
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 104/192 (54%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V AE V S+V P+ LPE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ
Sbjct: 2 KVHDAEIVISAVSPAQYPATPLPEIALAGRSNVGKSSFINTLINRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + I ++ + VD+PGYGYA + R W K + Y R L +V L+D
Sbjct: 62 LNFYLIENTLHFVDVPGYGYAKVSKTERAKWGKMIETYLEQREQLRAVVSLVDLRHAPSQ 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWI 281
D++ +L +IP+ +V TK D K P N + +I+ F A +I
Sbjct: 122 EDIQMYEFLKYYEIPVIVVATKAD---------KIPRGKWNKHESMIKKALSFDPADTFI 172
Query: 282 MTSSVTNQGRDE 293
+ SS+T QG++E
Sbjct: 173 LFSSITKQGKEE 184
>gi|257065891|ref|YP_003152147.1| ribosome biogenesis GTP-binding protein YsxC [Anaerococcus prevotii
DSM 20548]
gi|256797771|gb|ACV28426.1| GTP-binding protein HSR1-related [Anaerococcus prevotii DSM 20548]
Length = 195
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 81/134 (60%)
Query: 118 EDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVD 177
E P + LPE A VGRSNVGKSS +NS + RKKLA TS PGKT+ IN +RIND + LVD
Sbjct: 16 EQWPREDLPELAFVGRSNVGKSSFINSFLCRKKLAKTSSVPGKTRTINFYRINDKFRLVD 75
Query: 178 LPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQI 237
LPGYGYA ++ + WDK +Y R L VFLL+D +D + W+ +
Sbjct: 76 LPGYGYAKVSKKEKAKWDKLINEYLHQREALREVFLLVDIRHEPTALDKQMYDWIRETGF 135
Query: 238 PMTLVFTKCDKRKK 251
++ TK DK KK
Sbjct: 136 TGFVIATKFDKIKK 149
>gi|227500205|ref|ZP_03930274.1| GTPase [Anaerococcus tetradius ATCC 35098]
gi|227217727|gb|EEI83031.1| GTPase [Anaerococcus tetradius ATCC 35098]
Length = 195
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 82/131 (62%)
Query: 121 PSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPG 180
P + LPE ALVGRSNVGKSS +NS + RKKLA TS PGKT+ IN +RIND + LVDLPG
Sbjct: 19 PGEDLPEIALVGRSNVGKSSFINSFLGRKKLAKTSSKPGKTRTINFYRINDKFRLVDLPG 78
Query: 181 YGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMT 240
YGYA + + WDK +Y R +L VFL++D +D + W+ ++
Sbjct: 79 YGYAKVSKAEKDKWDKLINEYLHQRESLREVFLIVDIRHEPTTLDCQMYKWIRESGFTGF 138
Query: 241 LVFTKCDKRKK 251
++ TK DK KK
Sbjct: 139 VIATKFDKIKK 149
>gi|158521131|ref|YP_001529001.1| HSR1-like GTP-binding protein [Desulfococcus oleovorans Hxd3]
gi|238686898|sp|A8ZXG6.1|ENGB_DESOH RecName: Full=Probable GTP-binding protein EngB
gi|158509957|gb|ABW66924.1| GTP-binding protein HSR1-related [Desulfococcus oleovorans Hxd3]
Length = 197
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ AEFV S+V+ P LPE A GRSNVGKSS++N LV RK L TS TPGKT+ I
Sbjct: 3 IRSAEFVISAVQPSQYPDTDLPEIAFAGRSNVGKSSMINLLVNRKNLVKTSSTPGKTRLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F IN VDLPGYGYA R+ + W + Y +R TL + LL+D +
Sbjct: 63 NFFDINGQLMFVDLPGYGYAKVSRKEQKTWGPMVERYLSSRKTLRGLMLLMDLRREPRED 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
+ W IP +V TK DK KK +R E+ + A I+ S
Sbjct: 123 EFLMMQWCAHYDIPWKMVLTKADKFKKTAADRRR--------HEIARAVGIGADEMILFS 174
Query: 285 SVTNQGRDEILLHMAQL 301
++ GRD L +A++
Sbjct: 175 TLQKMGRDPALETIARM 191
>gi|333906855|ref|YP_004480441.1| GTP-binding protein engB [Marinomonas posidonica IVIA-Po-181]
gi|333476861|gb|AEF53522.1| GTP-binding protein engB [Marinomonas posidonica IVIA-Po-181]
Length = 214
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 102 DAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
D+ A F+KS+ + CP D E A GRSN GKS+ LN+L +KKLA TSKTPG+T
Sbjct: 5 DSTFQSAYFIKSAEKLSQCPLDQGVEVAFAGRSNAGKSTALNTLTNQKKLARTSKTPGRT 64
Query: 162 QCINHFRIN-DSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIP 220
Q IN F +N D L+DLPGYG+A P E++ W +DY +NR +L V L++D P
Sbjct: 65 QLINCFGLNLDDRRLIDLPGYGFAKVPIEMKKVWQAHMQDYLMNRRSLAGVVLVMDIRHP 124
Query: 221 AKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPW 280
K D W N + + ++ TK DK K+ Q+ I G QT
Sbjct: 125 LKEFDEMMLDWAKANGMKVHVLLTKSDKLKRGPAKSTMLSIQRELKQQNIDGSVQT---- 180
Query: 281 IMTSSVTNQGRDEILLHMAQLRNYWL 306
S++ G D++ + +A+ WL
Sbjct: 181 --FSALNGDGVDDLRIKLAE----WL 200
>gi|333448172|ref|ZP_08483114.1| GTP-binding protein YsxC [Leuconostoc inhae KCTC 3774]
Length = 205
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 86/149 (57%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V + V S+V P+DG PE ALVGRSNVGKSSL N+L++RK A TS PGKTQ +
Sbjct: 3 VHNVDMVMSAVSAAQYPTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + + D Y VD+PGYGYA ++ R ++ ++Y +R L V L+DA
Sbjct: 63 NFYNVEDKLYFVDVPGYGYAKVSKKQREEFGHMIEEYITSRKQLRGVVSLVDARHEPSDD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D+ WL IP+ +V TK DK K K
Sbjct: 123 DVSMYEWLHYYNIPILIVATKSDKISKSK 151
>gi|444920162|ref|ZP_21240005.1| Putative GTP-binding protein EngB [Wohlfahrtiimonas chitiniclastica
SH04]
gi|444508481|gb|ELV08650.1| Putative GTP-binding protein EngB [Wohlfahrtiimonas chitiniclastica
SH04]
Length = 203
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 83/142 (58%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
F+ S+ + P + E A GRSN GKSS LN+L + LA TSKTPG+TQ IN+F +
Sbjct: 13 FLTSANQLNQLPDNDGREVAFAGRSNAGKSSALNALTSQNTLARTSKTPGRTQLINYFEV 72
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
++ YLVDLPGYGYA P +R W + YF R LV + +L+D P P+DL+
Sbjct: 73 DEKSYLVDLPGYGYAKVPERIRLHWRSVLQGYFETRKNLVGLVMLMDVRHPLTPLDLQML 132
Query: 230 SWLGQNQIPMTLVFTKCDKRKK 251
W +P ++ TK DK K+
Sbjct: 133 EWCEAQNLPTHILLTKADKLKR 154
>gi|420264700|ref|ZP_14767322.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus sp. C1]
gi|394767380|gb|EJF48039.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus sp. C1]
Length = 194
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 104/192 (54%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +AE V S+V P LPE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ
Sbjct: 2 KVHEAEIVISAVSPAQYPDTPLPEIALAGRSNVGKSSFINTLINRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + I ++ + VD+PGYGYA + R W K + Y R L +V L+D
Sbjct: 62 LNFYLIENTLHFVDVPGYGYAKVSKTERAKWGKMIETYLEQREQLRAVVSLVDLRHAPSQ 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWI 281
D++ +L +IP+ +V TK D K P N + +I+ F A +I
Sbjct: 122 EDVQMYEFLKYYEIPVIVVATKAD---------KIPRGKWNKHESMIKKALSFDPADTFI 172
Query: 282 MTSSVTNQGRDE 293
+ SS+T QG++E
Sbjct: 173 LFSSITKQGKEE 184
>gi|260427039|ref|ZP_05781018.1| ribosome biogenesis GTP-binding protein YsxC [Citreicella sp. SE45]
gi|260421531|gb|EEX14782.1| ribosome biogenesis GTP-binding protein YsxC [Citreicella sp. SE45]
Length = 217
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 102/191 (53%), Gaps = 5/191 (2%)
Query: 100 ARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPG 159
AR + +F+K V + P D E GRSNVGKSSL+N+L RK LA S TPG
Sbjct: 20 ARKLFAGEVDFLKGVVAMDGLPPDDRTEVCFAGRSNVGKSSLINALTGRKALARASNTPG 79
Query: 160 KTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASI 219
+TQ IN F + + YLVDLPGYG+A AP + W + K Y R++L F+LID+
Sbjct: 80 RTQEINFFTLGEERYLVDLPGYGFANAPVAVVEKWQRLLKQYLSGRASLRRAFVLIDSRH 139
Query: 220 PAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPP 279
K +D E + L ++ + V TK DK ++K+ E+ L+ +E + P
Sbjct: 140 GVKAVDEEIMTLLDRSAVTFQAVLTKSDKIREKER-----EKVLDQVREKLSKHPAAYPE 194
Query: 280 WIMTSSVTNQG 290
++TSS G
Sbjct: 195 LVLTSSEKGDG 205
>gi|313891565|ref|ZP_07825175.1| ribosome biogenesis GTP-binding protein YsxC [Dialister
microaerophilus UPII 345-E]
gi|313120024|gb|EFR43206.1| ribosome biogenesis GTP-binding protein YsxC [Dialister
microaerophilus UPII 345-E]
Length = 213
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 104/197 (52%), Gaps = 20/197 (10%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
+VKS+V + D E A +GRSNVGKSSL+NSL KKLA S+ PGKT+ IN++ +
Sbjct: 17 YVKSAVNAKQYVEDEYVEIAFIGRSNVGKSSLINSLCGNKKLARVSREPGKTRTINYYAV 76
Query: 170 N-----------DSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDAS 218
WYLVDLPGYG+A ++ + W F DY L+ + LL+D
Sbjct: 77 QSRKAINEKEERQDWYLVDLPGYGFAKTSQKNKDMWSSFISDYIYKSEKLILICLLVDLR 136
Query: 219 IPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP 278
P +D++ WL + + + ++ TK DK G +NL +++ FQ
Sbjct: 137 HPGLAMDMKAYEWLVNSGVDVQIIATKADKL-----GNNEKRKNLAQVKKI----FQLKN 187
Query: 279 PWIMTSSVTNQGRDEIL 295
P I SS+ N+GR E+L
Sbjct: 188 PPIAYSSLKNEGRKELL 204
>gi|345859931|ref|ZP_08812262.1| small GTP-binding domain protein [Desulfosporosinus sp. OT]
gi|344326989|gb|EGW38436.1| small GTP-binding domain protein [Desulfosporosinus sp. OT]
Length = 188
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 82/136 (60%)
Query: 113 SSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDS 172
S+V+ + P GLPE A+ GRSNVGKSSL+N + R+ LA T TPGKTQ +N + +ND+
Sbjct: 3 SAVKHDQYPVGGLPEIAMAGRSNVGKSSLINKFLGRRNLARTGNTPGKTQTLNFYSVNDA 62
Query: 173 WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWL 232
W+LVDLPGYGYA + + W + Y R +L +V ++D D+E WL
Sbjct: 63 WFLVDLPGYGYAKVAKTVNAQWGPMMETYLKKRESLRAVLQIVDIRHAPSIEDIEMQQWL 122
Query: 233 GQNQIPMTLVFTKCDK 248
++P +V TK DK
Sbjct: 123 RTMEVPTLVVATKVDK 138
>gi|89068161|ref|ZP_01155578.1| GTP-binding protein [Oceanicola granulosus HTCC2516]
gi|89046400|gb|EAR52457.1| GTP-binding protein [Oceanicola granulosus HTCC2516]
Length = 218
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 93/185 (50%), Gaps = 5/185 (2%)
Query: 106 AQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCIN 165
+ FVK V P PE GRSNVGKS+L+N+L RK LA S TPG+TQ IN
Sbjct: 27 GEVTFVKGVVAMSGLPGADRPEVCFAGRSNVGKSTLINALTGRKALARASNTPGRTQEIN 86
Query: 166 HFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPID 225
+F + DS YLVDLPGYG+A AP + W K Y R TL F+LIDA AK +D
Sbjct: 87 YFALADSHYLVDLPGYGFANAPVAVVAKWQALLKQYLQGRQTLRRAFVLIDARHGAKAVD 146
Query: 226 LEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSS 285
E + L + V TK DK K + + L+ + + P ++TSS
Sbjct: 147 EEIMALLDSAAVTFQCVLTKADKIKASER-----DRVLDQVRATLARHPAAYPEIVLTSS 201
Query: 286 VTNQG 290
G
Sbjct: 202 EKGDG 206
>gi|340357280|ref|ZP_08679900.1| ribosome biogenesis GTP-binding protein YsxC [Sporosarcina
newyorkensis 2681]
gi|339617915|gb|EGQ22524.1| ribosome biogenesis GTP-binding protein YsxC [Sporosarcina
newyorkensis 2681]
Length = 193
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 86/150 (57%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V E + S+V+ E P++G PEFAL GRSNVGKSS +N ++ RK LA TS PGKTQ
Sbjct: 2 KVHNVEMIMSAVKPEQYPTEGYPEFALAGRSNVGKSSFINKMIGRKSLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N ++I + + VD+PGYGYA + R W K + Y R L +V L++D P
Sbjct: 62 LNFYKIEEQLFFVDVPGYGYAKVSKTEREAWGKMIERYITAREELRAVLLIVDLRHPPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D +L +P +V TK DK K K
Sbjct: 122 DDCMMYDFLAHYNVPTIVVATKADKIPKGK 151
>gi|257869244|ref|ZP_05648897.1| GTP-binding protein [Enterococcus gallinarum EG2]
gi|357050130|ref|ZP_09111341.1| GTP-binding protein engB [Enterococcus saccharolyticus 30_1]
gi|257803408|gb|EEV32230.1| GTP-binding protein [Enterococcus gallinarum EG2]
gi|355382179|gb|EHG29284.1| GTP-binding protein engB [Enterococcus saccharolyticus 30_1]
Length = 195
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 103/192 (53%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V AE V S+V P LPE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ
Sbjct: 2 KVHDAEIVISAVSPAQYPDTHLPEIALAGRSNVGKSSFINTLINRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + I ++ + VD+PGYGYA + R W K + Y R L +V L+D
Sbjct: 62 LNFYLIENTLHFVDVPGYGYAKVSKTERAKWGKMIETYLAERQQLRAVVSLVDLRHAPSQ 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWI 281
D++ +L +IP+ +V TK D K P N + +I+ F A +I
Sbjct: 122 EDIQMYQFLKYYEIPVIVVATKAD---------KIPRGKWNKHESVIKKALEFDPADTFI 172
Query: 282 MTSSVTNQGRDE 293
+ SS+T QG++E
Sbjct: 173 LFSSITKQGKEE 184
>gi|365902984|ref|ZP_09440807.1| GTP-binding protein YsxC [Lactobacillus malefermentans KCTC 3548]
Length = 202
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 102/193 (52%), Gaps = 11/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V E V S+V P+ G PE ALVGRSNVGKSSL N L+ R+ A TS PGKTQ
Sbjct: 3 EVNNVELVMSAVSPTQYPTTGYPEIALVGRSNVGKSSLTNVLINRRSYARTSSQPGKTQT 62
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +++ + Y VD+PGYGYA R+ R W + + Y R L V L+DA
Sbjct: 63 LNFYKVEEDLYFVDVPGYGYAKVSRQEREKWGEMIETYLTQREQLKGVISLVDARHEPSQ 122
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQG--FFQTAPPWI 281
D++ WL +IP+ +V TK DK + K N + +I+ F +I
Sbjct: 123 EDVQMYQWLSYYEIPILVVATKSDKIVRGK---------WNKQESIIKKKLEFDKKDSFI 173
Query: 282 MTSSVTNQGRDEI 294
M S+ T G+++I
Sbjct: 174 MFSAQTKMGKEDI 186
>gi|338741687|ref|YP_004678649.1| GTP-binding protein [Hyphomicrobium sp. MC1]
gi|337762250|emb|CCB68085.1| GTP-binding protein, putative EngB [Hyphomicrobium sp. MC1]
Length = 218
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 105/193 (54%), Gaps = 6/193 (3%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF-R 168
F + + + P D PE A GRSNVGKSSL+N+LV + +LA S TPG+TQ +N F
Sbjct: 25 FSRGTPDLDHLPPDDRPEIAFAGRSNVGKSSLINALVGQLRLARASNTPGRTQDLNFFTE 84
Query: 169 INDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEY 228
ND YLVD+PGYG+A AP++ W+K + Y R TL+ VFLL+DA KP+D E
Sbjct: 85 PNDELYLVDMPGYGFAEAPKDKVAAWNKVLRAYLAGRRTLLRVFLLVDARHGLKPVDDEI 144
Query: 229 ASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTN 288
+ L + +V TK DK K E+ QE + P I+TSS
Sbjct: 145 MALLDGAAVSYQVVLTKVDKISKTD-----LEKVAERTQEALAKHPAAFPQLILTSSEKA 199
Query: 289 QGRDEILLHMAQL 301
G +E+ +AQL
Sbjct: 200 LGFEELRGTIAQL 212
>gi|335357156|ref|ZP_08549026.1| GTP-binding protein [Lactobacillus animalis KCTC 3501]
Length = 197
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 86/149 (57%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V E S+VR E P++G PE AL GRSNVGKSSL+N+L+ RK A TS PGKTQ +
Sbjct: 3 VHNVELTISAVRPEQYPAEGYPEIALSGRSNVGKSSLINTLINRKNYARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + I D Y VD+PGYGYA ++ R W K + YF R L V L+DA +
Sbjct: 63 NFYNIEDELYFVDVPGYGYAKVSKKDREKWGKMIETYFETRQELRGVISLVDARHEPTEL 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D + +L +P+ +V TK DK + K
Sbjct: 123 DCQMIEFLHYYNLPILVVGTKIDKIARGK 151
>gi|225850861|ref|YP_002731095.1| ribosome biogenesis GTP-binding protein YsxC [Persephonella marina
EX-H1]
gi|225646661|gb|ACO04847.1| ribosome biogenesis GTP-binding protein YsxC [Persephonella marina
EX-H1]
Length = 203
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 87/144 (60%), Gaps = 1/144 (0%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ + +F+KS+V +D P PE A+VGRSNVGKSSL+N++ +R +A S +PGKT+ I
Sbjct: 4 IKKVQFIKSAVNPKDYPQPKYPEVAVVGRSNVGKSSLINAIFKRN-IAKVSSSPGKTRLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F +ND VDLPGYGYAA + R W K + YF R L V +L+D+ P +
Sbjct: 63 NFFLLNDRISFVDLPGYGYAAVSKAERAKWKKMIEKYFQTRENLSLVIMLVDSRHPPTKL 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK 248
D+ WL IP +V TK DK
Sbjct: 123 DIMMKEWLEDLGIPYIVVATKADK 146
>gi|257091947|ref|YP_003165588.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257044471|gb|ACV33659.1| GTP-binding protein HSR1-related [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 234
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 86/148 (58%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA F + D PSD L E A GRSN GKSS +N+L +LA SKTPG+TQ +N+
Sbjct: 6 QAAFHTTVADLRDLPSDSLCEVAFAGRSNAGKSSAINTLANHSRLAFVSKTPGRTQHLNY 65
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
FR+ D Y VDLPGYG+A AP E+R+ W+ Y +R L + L++D+ P +D+
Sbjct: 66 FRLADGKYFVDLPGYGFAKAPEEIRSQWEGLLAPYLRHREVLRGLVLIMDSRHPLTELDV 125
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKN 254
+ W P+ ++ +K DK +++
Sbjct: 126 QMLRWFAPTGKPLHVLLSKADKLTRQEQ 153
>gi|403387719|ref|ZP_10929776.1| GTP-binding protein YsxC [Clostridium sp. JC122]
Length = 196
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 89/145 (61%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ Q+EFV S+V+ + P D EFA VGRSNVGKSSL+N+L RKKL S TPGKT+
Sbjct: 2 EIKQSEFVISAVKPQQYPIDNRVEFAFVGRSNVGKSSLINTLTNRKKLVKVSGTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F IN+ +Y VDLPGYGYA ++ + W K + Y ++R L + LL+D+
Sbjct: 62 INFFLINNEFYFVDLPGYGYAKVSKKEKDSWGKMMEKYLIDRPQLKKIVLLVDSRHKPTN 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK 248
D+ +W+ + +V TK DK
Sbjct: 122 DDVIMYNWVKHYGYNVIVVATKRDK 146
>gi|392949119|ref|ZP_10314714.1| ribosome biogenesis GTPase, YsxC/EngB family [Lactobacillus
pentosus KCA1]
gi|392435708|gb|EIW13637.1| ribosome biogenesis GTPase, YsxC/EngB family [Lactobacillus
pentosus KCA1]
Length = 197
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 100/193 (51%), Gaps = 11/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V E V S+V P+ G PE L GRSNVGKSSL+N L+ R A TS PGKTQ
Sbjct: 2 EVHNVELVMSAVAPSQYPTTGFPEIGLAGRSNVGKSSLINVLINRNSYARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +++ D Y VD+PGYGYA ++ R W + + Y R TL V +L+DA
Sbjct: 62 LNFYKVEDQLYFVDVPGYGYAKVSKKEREKWGQMIETYLTTRETLRGVVILVDARHAPTK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWI 281
D+ W+ ++P+ +V TK D K P N + LI+ FQ +I
Sbjct: 122 DDVAMYEWMRYYEMPLLVVATKSD---------KIPRGKWNKQESLIKKTLNFQPEDDFI 172
Query: 282 MTSSVTNQGRDEI 294
S+ T +G+D +
Sbjct: 173 AFSAKTKEGKDAV 185
>gi|297205853|ref|ZP_06923248.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
jensenii JV-V16]
gi|297148979|gb|EFH29277.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
jensenii JV-V16]
Length = 196
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 93/150 (62%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +E+ S+VR + P D LPE AL GRSNVGKSSL+NS + RK LA TS PGKTQ
Sbjct: 2 KIISSEYSVSAVREDQYPRDILPEIALAGRSNVGKSSLINSFLNRKNLARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +++N+S+YLVD+PGYGYA + R + + +DY R L + ++IDA
Sbjct: 62 LNFYKVNNSFYLVDVPGYGYARVSKAQREQFGEMIQDYLETRGNLEGLIIIIDARHEPTV 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D+ ++ +P+ +V TK DK KK +
Sbjct: 122 DDIAMYNYALLLDLPILVVATKMDKIKKSQ 151
>gi|126653685|ref|ZP_01725604.1| GTP-binding protein [Bacillus sp. B14905]
gi|126589722|gb|EAZ83857.1| GTP-binding protein [Bacillus sp. B14905]
Length = 193
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 85/150 (56%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V E V S+VR + P DGLPEFAL GRSNVGKSS +N ++ RK LA S PGKTQ
Sbjct: 2 KVHNVEMVISAVRPDQYPEDGLPEFALAGRSNVGKSSFINRMIGRKALARISSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N ++I + + VD+PGYGYA + R W K + YF R L +V +ID P
Sbjct: 62 LNFYKIEEQLFFVDVPGYGYAKVSKSEREAWGKMIERYFTGRQELKAVVQIIDLRHPPTA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D +L IP ++ TK DK K K
Sbjct: 122 DDRMMYDFLKHYNIPCIVIATKADKIPKGK 151
>gi|152994783|ref|YP_001339618.1| HSR1-like GTP-binding protein [Marinomonas sp. MWYL1]
gi|150835707|gb|ABR69683.1| GTP-binding protein HSR1-related [Marinomonas sp. MWYL1]
Length = 214
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 102 DAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
D+ A F+KS+ + CP D E A GRSN GKS+ LN+L +KKLA TSKTPG+T
Sbjct: 5 DSTFQSAHFIKSAEKLSQCPLDQGVEVAFAGRSNAGKSTALNTLTNQKKLARTSKTPGRT 64
Query: 162 QCINHFRIN-DSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIP 220
Q IN F +N D L+DLPGYG+A P ++ W +DY +NR +L V L++D P
Sbjct: 65 QLINCFGLNVDDRRLIDLPGYGFAKVPIAMKKVWQAHMQDYLMNRRSLAGVVLVMDIRHP 124
Query: 221 AKPIDLEYASWLGQNQIPMTLVFTKCDKRKK 251
K D W N++ + ++ TK DK K+
Sbjct: 125 LKEFDEMMLDWAKSNRMKVHVLLTKSDKLKR 155
>gi|334882265|emb|CCB83253.1| putative GTP-binding protein engB [Lactobacillus pentosus MP-10]
gi|339639090|emb|CCC18309.1| putative GTP-binding protein EngB [Lactobacillus pentosus IG1]
Length = 197
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 100/193 (51%), Gaps = 11/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V E V S+V P+ G PE L GRSNVGKSSL+N L+ R A TS PGKTQ
Sbjct: 2 EVHNVELVMSAVAPSQYPTTGFPEIGLAGRSNVGKSSLINVLINRNSYARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +++ D Y VD+PGYGYA ++ R W + + Y R TL V +L+DA
Sbjct: 62 LNFYKVEDQLYFVDVPGYGYAKVSKKEREKWGQMIETYLTTRDTLRGVVILVDARHAPTK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWI 281
D+ W+ ++P+ +V TK D K P N + LI+ FQ +I
Sbjct: 122 DDVAMYEWMRYYEMPLLVVATKSD---------KIPRGKWNKQESLIKKTLNFQPEDDFI 172
Query: 282 MTSSVTNQGRDEI 294
S+ T +G+D +
Sbjct: 173 AFSAKTKEGKDAV 185
>gi|410727506|ref|ZP_11365722.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Clostridium sp.
Maddingley MBC34-26]
gi|410598580|gb|EKQ53149.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Clostridium sp.
Maddingley MBC34-26]
Length = 198
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 105/192 (54%), Gaps = 7/192 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ ++EF+ S+V+ P D E A VGRSNVGKSSL+NSL RKKLA S+TPGKT+
Sbjct: 2 RIKKSEFITSAVKKNQYPIDNRVEIAFVGRSNVGKSSLINSLTNRKKLAKVSQTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N F IND +YLVDLPGYGYA + + W K + Y +R L V LL+D+
Sbjct: 62 VNFFLINDDFYLVDLPGYGYAKVSQAEKDSWGKTVEMYLNDREQLKRVVLLVDSRHKPTG 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D+ W+ + ++ TK DK +N + E+ + D +L
Sbjct: 122 DDIMMHEWIKHFGYDVIVIATKSDKL--TRNELNKNEKVIRDTLKL-----NLEDKLYFF 174
Query: 284 SSVTNQGRDEIL 295
SS+ GRDE++
Sbjct: 175 SSLNRNGRDELI 186
>gi|342216045|ref|ZP_08708692.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus sp.
oral taxon 375 str. F0436]
gi|341586935|gb|EGS30335.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus sp.
oral taxon 375 str. F0436]
Length = 199
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 88/150 (58%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A + +V + P L E A GRSNVGKSS +N+L +RKKLA TS PGKT+
Sbjct: 2 KINDASLEQMAVGPKQYPKTDLKEIAFAGRSNVGKSSFINALTQRKKLAYTSSKPGKTRT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN +RI++ + LVDLPGYGYA + +R DW + + Y NRS ++ + LL+D+ I
Sbjct: 62 INFYRIDNCFRLVDLPGYGYAKVSKAMRDDWAQMIEGYLANRSNIIEIILLVDSRIEPTS 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D E W+ N ++ TK DK K +
Sbjct: 122 QDREMYQWIVDNGFSGIVIATKADKLSKNQ 151
>gi|90415434|ref|ZP_01223368.1| hypothetical protein GB2207_08961 [gamma proteobacterium HTCC2207]
gi|90332757|gb|EAS47927.1| hypothetical protein GB2207_08961 [marine gamma proteobacterium
HTCC2207]
Length = 236
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 87/142 (61%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
F+ S+ + CP D E A GRSN GKSS +N+L R + LA TSKTPG+TQ IN F +
Sbjct: 37 FLTSAPSIKQCPEDSGCEVAFAGRSNAGKSSAINTLTRIRGLARTSKTPGRTQLINFFDL 96
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
+ LVDLPGYGYA P E++ +WD+ +Y R +L + LL+D P + DL+
Sbjct: 97 GNDKRLVDLPGYGYAKVPIEMKREWDRDLAEYLQLRQSLAGLVLLMDIRHPLQEFDLQML 156
Query: 230 SWLGQNQIPMTLVFTKCDKRKK 251
+W Q +P+ ++ TK DK K+
Sbjct: 157 NWAAQAGLPVHILLTKSDKLKR 178
>gi|56964398|ref|YP_176129.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus clausii
KSM-K16]
gi|81822069|sp|Q5WEP2.1|ENGB_BACSK RecName: Full=Probable GTP-binding protein EngB
gi|56910641|dbj|BAD65168.1| GTP-binding protein [Bacillus clausii KSM-K16]
Length = 197
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 108/200 (54%), Gaps = 13/200 (6%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +AE +V+ E P + LPE AL GRSNVGKSS +N ++ RK LA TS PGKTQ
Sbjct: 2 KVTKAELAHVAVKAEQYPKNQLPELALAGRSNVGKSSFINKMLNRKGLARTSGQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDA-SIPAK 222
+N + IN+ Y VD+PGYGYA + R W K + Y R L +V L+D P++
Sbjct: 62 LNFYEINERLYFVDVPGYGYAKVSKTERAAWGKMIETYLSEREELKAVLQLVDIRHRPSE 121
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
L Y +W+ IP+ LV TK DK K K ++ L + + + + P +
Sbjct: 122 DDQLMY-NWMKHYGIPVILVATKADKIPKGK-----WQKQLTAIAKTLDK--EASDPLLF 173
Query: 283 TSSVTNQGRDE----ILLHM 298
SS T G+DE IL H+
Sbjct: 174 FSSATGLGKDEAWRTILNHL 193
>gi|219122173|ref|XP_002181426.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407412|gb|EEC47349.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 197
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 106/200 (53%), Gaps = 23/200 (11%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
FV +V E CP E +GRSNVGKSSL+N + RK LA TSK PGKTQ N F
Sbjct: 6 FVTGAVTMEGCPPSDRGEAVFIGRSNVGKSSLVNMVTNRKSLAYTSKRPGKTQQFNFFAD 65
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLI---------DASIP 220
DS+ +VDLPG+GYA P ELR +W F Y NR TL +F L+ DASI
Sbjct: 66 QDSFNIVDLPGFGYAKVPEELRKEWSIFMDAYIANRKTLRVLFHLVDGRHGPTDEDASIM 125
Query: 221 AKPIDL--EYASWLGQNQIPMTLVFTKCDKRKK----KKNGGKRPEENLNDFQELIQGFF 274
+ DL YA+++ +V TK DK K K GK + ++ ++ ++
Sbjct: 126 RRVGDLLPGYATYV--------VVLTKADKNVKGAASNKKAGKVSSDVVDAVRQAMKQNG 177
Query: 275 QTAPPWIMTSSVTNQGRDEI 294
P I+TS+ T GRD+I
Sbjct: 178 VGNAPVILTSAETKLGRDDI 197
>gi|323137576|ref|ZP_08072653.1| ribosome biogenesis GTP-binding protein YsxC [Methylocystis sp.
ATCC 49242]
gi|322397202|gb|EFX99726.1| ribosome biogenesis GTP-binding protein YsxC [Methylocystis sp.
ATCC 49242]
Length = 217
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 104/198 (52%), Gaps = 10/198 (5%)
Query: 109 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFR 168
+F+ +S + D P G PE A GRSNVGKSSLLN+L RK LA S TPG+TQ +N F
Sbjct: 19 DFIFASAKPNDLPPLGPPEIAFAGRSNVGKSSLLNALTNRKTLARVSHTPGRTQQLNFFA 78
Query: 169 INDS-----WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+ + LVD+PGYGYAA +E W +DY R++L VF+L+D KP
Sbjct: 79 LGGAPGAERLRLVDMPGYGYAAVGKEKVASWSVLMRDYLRGRASLARVFVLVDGRRGVKP 138
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
+D E L Q+ + ++ TK D+ K + E L E + P I T
Sbjct: 139 VDAEMFDLLDQSAVSYQVILTKHDELKVAERA-----EVLAATAEALSRRPAAYPEIIFT 193
Query: 284 SSVTNQGRDEILLHMAQL 301
SS T +G E+ +A+L
Sbjct: 194 SSHTGEGIAELRGAVARL 211
>gi|119475280|ref|ZP_01615633.1| GTP-binding protein XF1430 [marine gamma proteobacterium HTCC2143]
gi|119451483|gb|EAW32716.1| GTP-binding protein XF1430 [marine gamma proteobacterium HTCC2143]
Length = 202
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 86/145 (59%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QAEF S+ + DCPSD E A GRSN GKSS +N+L K++A TSKTPG+TQ +N
Sbjct: 10 QAEFRTSAAKLADCPSDDGCEVAFAGRSNAGKSSAINTLTDNKRMARTSKTPGRTQLLNF 69
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + + LVDLPGYG+A P ++ W + +Y R +L + LL+D P + D
Sbjct: 70 FDVGERQRLVDLPGYGFAKVPLAVKEKWQRHLGEYLRERESLAGLVLLMDCRHPLQEFDR 129
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKK 251
+W ++P+ ++ TK DK KK
Sbjct: 130 MMLAWAEGCEMPVHILLTKADKLKK 154
>gi|433449630|ref|ZP_20412494.1| GTP-binding protein YsxC [Weissella ceti NC36]
gi|429539144|gb|ELA07182.1| GTP-binding protein YsxC [Weissella ceti NC36]
Length = 200
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 101/194 (52%), Gaps = 12/194 (6%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
QV + S+VR P DG PE ALVGRSNVGKSSL N+L+ RK A TS PGKTQ
Sbjct: 2 QVHNVDLKISAVRPNQYPDDGFPEVALVGRSNVGKSSLTNTLINRKAYARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + + D+ Y VD+PGYGYA ++ R W + Y R L V L+DA
Sbjct: 62 LNFYNVEDAVYFVDVPGYGYAKVSKKEREKWGAMIETYLSQRKQLRGVISLVDARHSPSE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQ---GFFQTAPPW 280
D+ +WL IP+ +V TK DK + K N + LI+ F ++ +
Sbjct: 122 DDINMYNWLLYYNIPVLVVATKADKIARGK---------WNQAEALIKRELDFDPSSSEF 172
Query: 281 IMTSSVTNQGRDEI 294
M SS T G++ +
Sbjct: 173 TMFSSETKYGKERV 186
>gi|407775416|ref|ZP_11122710.1| GTP-binding protein YsxC [Thalassospira profundimaris WP0211]
gi|407281423|gb|EKF06985.1| GTP-binding protein YsxC [Thalassospira profundimaris WP0211]
Length = 220
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 104/195 (53%), Gaps = 11/195 (5%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
FV + E P + E GRSNVGKSSL+N++ RK +A TS TPG+TQ +N+F +
Sbjct: 33 FVLGVAQLEQLPPEDKTEICFAGRSNVGKSSLINAITGRKDIARTSNTPGRTQQLNYFDL 92
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
+ + Y+VDLPGYG+A AP+++ W K Y R TL VF+LID+ K DL+
Sbjct: 93 DGACYIVDLPGYGFAQAPKDIVDTWHALIKQYLRGRVTLRRVFVLIDSRHGFKKADLDMM 152
Query: 230 SWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQ---TAPPWIMTSSV 286
L + +P +V TK DK KK + + +E++ G + P TSS
Sbjct: 153 KLLDEAAVPYQVVLTKADKLKKGQLEKR--------IKEVVDGLIKHPAALPQIFATSSE 204
Query: 287 TNQGRDEILLHMAQL 301
N G E+ ++ L
Sbjct: 205 KNTGLAELRAEISTL 219
>gi|323489957|ref|ZP_08095178.1| GTP-binding protein [Planococcus donghaensis MPA1U2]
gi|323396253|gb|EGA89078.1| GTP-binding protein [Planococcus donghaensis MPA1U2]
Length = 193
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 104/192 (54%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V E V S+VR + P DGLPEFAL GRSNVGKSS +N ++ RK +A S PGKTQ
Sbjct: 2 KVNNVELVISAVRPDQYPEDGLPEFALAGRSNVGKSSFINKMIGRKSMARISSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N ++I + + VD+PGYGYA + R W K + Y +R L +V ++D P
Sbjct: 62 LNFYKIEEKLFYVDVPGYGYAKVSKSEREAWGKMIERYITDREPLRAVIQIVDLRHPPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQT--APPWI 281
D+ ++ +IP ++ TK D K P+ + +++++ + P I
Sbjct: 122 DDIAMYDFMKHFEIPCIIIATKAD---------KIPKGKWDKHKKIVRTTLDMDKSDPLI 172
Query: 282 MTSSVTNQGRDE 293
+ SS T G+DE
Sbjct: 173 VFSSETGLGKDE 184
>gi|406887457|gb|EKD34232.1| hypothetical protein ACD_75C02423G0008 [uncultured bacterium]
Length = 194
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 105/193 (54%), Gaps = 8/193 (4%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+ EF+ S + + P LPE + GRSNVGKSSL+N+L+ RK L S PGKTQ +N+
Sbjct: 5 KVEFLLSVHQLKQLPPVELPEISFAGRSNVGKSSLINTLIGRKSLVKVSARPGKTQGLNY 64
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
FR+ D +++VDLPGYG+A P+ ++ W + +R +L V +++D K D
Sbjct: 65 FRVGDDFFIVDLPGYGFAKVPKVMQNAWQSLISTFLESRESLKCVVVIMDIRHEPKKQDT 124
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSV 286
+ WL + IP V+TK DK G E+N N L G I+ S+
Sbjct: 125 QLIQWLKEKSIPCLPVYTKTDKLS-----GNEREKNAN---LLDAGHSIRRQDRILFSAK 176
Query: 287 TNQGRDEILLHMA 299
T QGRDE++ +A
Sbjct: 177 TGQGRDELIAALA 189
>gi|227893378|ref|ZP_04011183.1| GTPase [Lactobacillus ultunensis DSM 16047]
gi|227864793|gb|EEJ72214.1| GTPase [Lactobacillus ultunensis DSM 16047]
Length = 196
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 91/147 (61%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ + + S+V+ P D LPE AL GRSNVGKSSL+N+L++RK LA TS PGKTQ +
Sbjct: 3 IKSSSYAVSAVKESQYPKDNLPEIALAGRSNVGKSSLINTLLKRKNLARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + +ND +YLVD+PGYGYA ++ R ++ + +DY R L + +LID+
Sbjct: 63 NFYMVNDDFYLVDVPGYGYAKVSQKKRQEFGEMIQDYLETRPNLKGLIILIDSRHEPTKD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKK 251
D+ ++ IP+ +V TK DK KK
Sbjct: 123 DIAMYNYAQYLNIPILVVCTKMDKIKK 149
>gi|299535611|ref|ZP_07048932.1| GTP-binding protein [Lysinibacillus fusiformis ZC1]
gi|424739021|ref|ZP_18167446.1| GTP-binding protein [Lysinibacillus fusiformis ZB2]
gi|298728811|gb|EFI69365.1| GTP-binding protein [Lysinibacillus fusiformis ZC1]
gi|422947109|gb|EKU41509.1| GTP-binding protein [Lysinibacillus fusiformis ZB2]
Length = 193
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 85/150 (56%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V E V S+VR + P DGLPEFAL GRSNVGKSS +N ++ RK LA S PGKTQ
Sbjct: 2 KVHNVEMVISAVRPDQYPEDGLPEFALAGRSNVGKSSFINRMIGRKALARISSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N ++I + + VD+PGYGYA + R W K + YF R L +V +ID P
Sbjct: 62 LNFYKIEEQLFFVDVPGYGYAKVSKTEREAWGKMIERYFTGRQELKAVVQIIDLRHPPTA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D +L IP ++ TK DK K K
Sbjct: 122 DDRMMYDFLKHYNIPCIVIATKADKIPKGK 151
>gi|258541763|ref|YP_003187196.1| ribosome biogenesis GTP-binding protein YsxC [Acetobacter
pasteurianus IFO 3283-01]
gi|384041684|ref|YP_005480428.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-12]
gi|384050199|ref|YP_005477262.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-03]
gi|384053309|ref|YP_005486403.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-07]
gi|384056541|ref|YP_005489208.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-22]
gi|384059182|ref|YP_005498310.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-26]
gi|384062476|ref|YP_005483118.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-32]
gi|384118552|ref|YP_005501176.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|421848409|ref|ZP_16281397.1| GTP-binding protein [Acetobacter pasteurianus NBRC 101655]
gi|421852390|ref|ZP_16285079.1| GTP-binding protein [Acetobacter pasteurianus subsp. pasteurianus
LMG 1262 = NBRC 106471]
gi|256632841|dbj|BAH98816.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-01]
gi|256635898|dbj|BAI01867.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-03]
gi|256638953|dbj|BAI04915.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-07]
gi|256642007|dbj|BAI07962.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-22]
gi|256645062|dbj|BAI11010.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-26]
gi|256648117|dbj|BAI14058.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-32]
gi|256651170|dbj|BAI17104.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654161|dbj|BAI20088.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-12]
gi|371460770|dbj|GAB26600.1| GTP-binding protein [Acetobacter pasteurianus NBRC 101655]
gi|371479470|dbj|GAB30282.1| GTP-binding protein [Acetobacter pasteurianus subsp. pasteurianus
LMG 1262 = NBRC 106471]
Length = 227
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 112/224 (50%), Gaps = 7/224 (3%)
Query: 80 DDSSLSTRILKGSNIVLS--KYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVG 137
DD++ S R LK + + + R EFV + + P LPE A GRSNVG
Sbjct: 3 DDAASSFRELKDEARIAAALEEGRRLFAGSCEFVFGAQKLGQLPPQTLPEIAFAGRSNVG 62
Query: 138 KSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKF 197
KSSL+N+L RK LA S PG+T+ +N F + D LVD+PGYGYA A + ++ DW
Sbjct: 63 KSSLVNALTGRKTLARASSEPGRTKQLNFFNLADRLMLVDMPGYGYAKAAKSVKEDWQDM 122
Query: 198 TKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGK 257
DY R +L V LL+DA + K DLE L + + +V TKCD K K
Sbjct: 123 MFDYLRGRPSLQRVVLLLDARVEMKAHDLEVMDLLDKAAVSFQVVLTKCDSVKPGPLARK 182
Query: 258 RPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQL 301
+ E + I+ P +TSS T +G + + +A+
Sbjct: 183 QAE-----VEAEIRRHPAAFPYLSLTSSQTGEGIEGLRAELAEF 221
>gi|456014399|gb|EMF48014.1| GTP-binding protein EngB [Planococcus halocryophilus Or1]
Length = 193
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 103/192 (53%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V E V S+VR + P DGLPEFAL GRSNVGKSS +N ++ RK +A S PGKTQ
Sbjct: 2 KVNNVELVISAVRPDQYPEDGLPEFALAGRSNVGKSSFINKMIGRKSMARISSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N ++I + + VD+PGYGYA + R W K + Y R L +V ++D P
Sbjct: 62 LNFYKIEEKLFYVDVPGYGYAKVSKSEREAWGKMIERYITGREPLRAVIQIVDLRHPPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQT--APPWI 281
D+ ++ +IP ++ TK D K P+ + +++++ + P I
Sbjct: 122 DDVAMYDFMKHFEIPCIIIATKAD---------KIPKGKWDKHKKIVRTTLEMEKTDPLI 172
Query: 282 MTSSVTNQGRDE 293
+ SS T G+DE
Sbjct: 173 VFSSETGLGKDE 184
>gi|429760072|ref|ZP_19292562.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella atypica
KON]
gi|429178477|gb|EKY19755.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella atypica
KON]
Length = 232
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 113/216 (52%), Gaps = 21/216 (9%)
Query: 98 KYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKT 157
K + ++ A++ S V+ + P E A +GRSNVGKSSL+NSL + LAL S
Sbjct: 20 KEIKGPRIIAAKYNTSCVKADQYPEGDTVEVAFLGRSNVGKSSLINSLCNYRGLALVSGQ 79
Query: 158 PGKTQCINHFRINDS------------WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNR 205
PGKT+ IN+F I W+LVDLPGYG+A ++ R W F DY L+
Sbjct: 80 PGKTKTINYFDIESKEDISETEERRYHWFLVDLPGYGFAKTNKDNRNMWSSFISDYILHS 139
Query: 206 STLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLND 265
L+ + LLID P PID WL + +P+ +V TK DK K E+++N
Sbjct: 140 ERLMLLCLLIDGRHPEMPIDKVAFDWLVEAGVPLQIVVTKVDKLNAK-------EKSINL 192
Query: 266 FQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQL 301
+ ++ + T P IM SS+ + GR+ + + Q+
Sbjct: 193 AK--VKAMYPTDSPPIMYSSLKHTGRELLQQRINQV 226
>gi|427392473|ref|ZP_18886478.1| ribosome biogenesis GTP-binding protein YsxC [Alloiococcus otitis
ATCC 51267]
gi|425731434|gb|EKU94252.1| ribosome biogenesis GTP-binding protein YsxC [Alloiococcus otitis
ATCC 51267]
Length = 201
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 107/190 (56%), Gaps = 9/190 (4%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +A+ + S+V + P GLPE AL GRSNVGKSS +NS+V RKKLA TS PGKT+ +
Sbjct: 6 IQKADILISAVSQDQYPDQGLPEVALAGRSNVGKSSFINSMVNRKKLAHTSSKPGKTRTL 65
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N +++ + LVD+PGYG+A + + W ++YF +R +LV V L+D +
Sbjct: 66 NFYQVENELLLVDVPGYGFAKVSKAEQNRWAAMMEEYFASRESLVLVIQLVDFRHKPSQL 125
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF-FQTAPPWIMT 283
D++ +L +P+ +V TK DK K P + Q++ Q +++
Sbjct: 126 DIQMYEYLSHFNLPVLVVATKADKVK--------PSKRDKQIQDITQALNLYDGDQFMVY 177
Query: 284 SSVTNQGRDE 293
S+ + +GRD+
Sbjct: 178 SAESKEGRDQ 187
>gi|401680482|ref|ZP_10812397.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp. ACP1]
gi|400218390|gb|EJO49270.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp. ACP1]
Length = 232
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 113/216 (52%), Gaps = 21/216 (9%)
Query: 98 KYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKT 157
K + ++ A++ S V+ + P E A +GRSNVGKSSL+NSL + LAL S
Sbjct: 20 KEIKGPRIIAAKYNTSCVKADQYPEGDTVEVAFLGRSNVGKSSLINSLCNYRGLALVSGQ 79
Query: 158 PGKTQCINHFRINDS------------WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNR 205
PGKT+ IN+F I W+LVDLPGYG+A ++ R W F DY L+
Sbjct: 80 PGKTKTINYFDIESKEDISETEERRYHWFLVDLPGYGFAKTNKDNRNMWSSFISDYILHS 139
Query: 206 STLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLND 265
L+ + LLID P PID WL + +P+ +V TK DK K E+++N
Sbjct: 140 ERLMLLCLLIDGRHPEMPIDKVAFDWLVEAGVPLQIVVTKVDKLNAK-------EKSINL 192
Query: 266 FQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQL 301
+ ++ + T P IM SS+ + GR+ + + Q+
Sbjct: 193 AK--VKAMYPTDSPPIMYSSLKHTGRELLQQRINQV 226
>gi|153813471|ref|ZP_01966139.1| hypothetical protein RUMOBE_03891 [Ruminococcus obeum ATCC 29174]
gi|149830415|gb|EDM85507.1| ribosome biogenesis GTP-binding protein YsxC [Ruminococcus obeum
ATCC 29174]
Length = 201
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 96/178 (53%), Gaps = 7/178 (3%)
Query: 117 TEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLV 176
T P GLPE A G+SNVGKSSL+N L+ RK LA TS PGKTQ IN ++IND LV
Sbjct: 15 TSKIPDTGLPEVAFAGKSNVGKSSLINGLMNRKALARTSAQPGKTQTINFYKINDELDLV 74
Query: 177 DLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQ 236
DLPGYGYA + W K ++Y L +VFLLID D + W+ N
Sbjct: 75 DLPGYGYARVTPAEKEKWGKMIENYLHTSHNLKAVFLLIDIRHDPSANDRQMYEWILHNG 134
Query: 237 IPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEI 294
++ TK DK K+ + ++NL +E +Q + I S+ T QGRDEI
Sbjct: 135 YEPIIIATKLDKLKR-----SQVQKNLKAIREGLQ--LKKGTTVIPYSAETKQGRDEI 185
>gi|372267077|ref|ZP_09503125.1| ribosome biogenesis GTP-binding protein YsxC [Alteromonas sp. S89]
Length = 218
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 86/144 (59%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
AEF+ S+ +CP D E A GRSN GKSS +N+L KLA TSKTPG+TQ IN
Sbjct: 13 HAEFLISAPTLAECPVDSGAEVAFAGRSNAGKSSAINALTDNNKLARTSKTPGRTQLINF 72
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F +++S LVDLPGYGYA R ++ +W + Y NR L + LL+D P K DL
Sbjct: 73 FHLSESQRLVDLPGYGYAKVARAMKDEWQRNLAFYLENRQCLKGLVLLMDIRQPLKEFDL 132
Query: 227 EYASWLGQNQIPMTLVFTKCDKRK 250
+ +W ++ +P ++ TK DK K
Sbjct: 133 QMLNWAVKSGLPAHILLTKADKLK 156
>gi|110835513|ref|YP_694372.1| GTP-binding protein [Alcanivorax borkumensis SK2]
gi|119368787|sp|Q0VL48.1|ENGB_ALCBS RecName: Full=Probable GTP-binding protein EngB
gi|110648624|emb|CAL18100.1| GTP-binding protein [Alcanivorax borkumensis SK2]
Length = 208
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 88/149 (59%)
Query: 102 DAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
+ ++ QA F++S+ R + CP D E A GRSN GKSS +N L ++ LA TSKTPG+T
Sbjct: 7 EKRLHQALFLQSAQRLDQCPPDEGREVAFAGRSNAGKSSAINRLTGQRSLARTSKTPGRT 66
Query: 162 QCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
Q +N F++++ LVDLPGYGYA + R +W + Y R LV + L++D P
Sbjct: 67 QLLNFFQLDEERRLVDLPGYGYAKVSKSKRNEWQEHLDHYLSERQALVGLVLMMDIRHPL 126
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDKRK 250
K DL W Q +P+ ++ TK DK K
Sbjct: 127 KDFDLMMLEWSAQANMPIHILMTKADKLK 155
>gi|256850971|ref|ZP_05556360.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
jensenii 27-2-CHN]
gi|260661185|ref|ZP_05862099.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
jensenii 115-3-CHN]
gi|256616033|gb|EEU21221.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
jensenii 27-2-CHN]
gi|260548122|gb|EEX24098.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
jensenii 115-3-CHN]
Length = 196
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 93/150 (62%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +E+ S+VR + P D LPE AL GRSNVGKSSL+NS + RK LA TS PGKTQ
Sbjct: 2 KIISSEYSVSAVREDQYPRDILPEIALAGRSNVGKSSLINSFLNRKNLARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +++N+S+YLVD+PGYGYA + R + + +DY R L + ++IDA
Sbjct: 62 LNFYKVNNSFYLVDVPGYGYARVSKAQREQFGEMIQDYLETRGNLEGLIIIIDARHEPTV 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D+ ++ +P+ +V TK DK KK +
Sbjct: 122 DDIAMYNYALLLDLPILVVATKMDKIKKSQ 151
>gi|87120351|ref|ZP_01076246.1| putative GTPase, involved in coordination of cell cycle (EngB)
[Marinomonas sp. MED121]
gi|86164454|gb|EAQ65724.1| putative GTPase, involved in coordination of cell cycle (EngB)
[Marinomonas sp. MED121]
Length = 211
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 109/201 (54%), Gaps = 11/201 (5%)
Query: 102 DAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
D+ A F+KS+ + CP D E A GRSN GKS+ LN+L +KKLA TSKTPG+T
Sbjct: 5 DSIFRSAHFIKSAEKLSQCPVDQGLEVAFAGRSNAGKSTALNTLTDQKKLARTSKTPGRT 64
Query: 162 QCINHFRIN-DSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIP 220
Q IN F +N + L+DLPGYG+A P ++ W +DY +NR +L V L++D P
Sbjct: 65 QLINCFGLNVEDRRLIDLPGYGFAKVPVAMKMKWQAHMQDYLMNRRSLAGVVLVMDIRHP 124
Query: 221 AKPIDLEYASWLGQNQIPMTLVFTKCDKRKK--KKNGGKRPEENLNDFQELIQGFFQTAP 278
K D W N++ + ++ TK DK K+ K+ + + L D + + G QT
Sbjct: 125 LKEFDHMMLDWAKSNKMQVHVILTKSDKLKRGPAKSTKLQVAKALKDLE--VIGSVQT-- 180
Query: 279 PWIMTSSVTNQGRDEILLHMA 299
S + G DE+ L ++
Sbjct: 181 ----FSGLNGDGIDELRLKLS 197
>gi|392531121|ref|ZP_10278258.1| GTP-binding protein YsxC [Carnobacterium maltaromaticum ATCC 35586]
gi|414084148|ref|YP_006992856.1| ribosome biogenesis GTP-binding protein YsxC [Carnobacterium
maltaromaticum LMA28]
gi|412997732|emb|CCO11541.1| ribosome biogenesis GTP-binding protein YsxC [Carnobacterium
maltaromaticum LMA28]
Length = 195
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 102/191 (53%), Gaps = 11/191 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V +A+ V S+V PS GLPE AL GRSNVGKSS +N ++ RK LA TS PGKTQ +
Sbjct: 3 VHKADIVISAVAPAQYPSTGLPEIALAGRSNVGKSSFINRMINRKGLARTSSKPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + I D +Y VD+PGYGYA + R W + + Y R TL +V ++D
Sbjct: 63 NFYIIQDQFYFVDVPGYGYAKVSKTERAKWGQMLETYLTKRDTLKAVLSVVDLRHAPSKE 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWIM 282
D++ +L +P+ +V TK D K P N ++++ F ++M
Sbjct: 123 DVQMYQFLKYYDLPVIVVATKAD---------KIPRSKWNKHIKIVKDTLEFDKNDEFVM 173
Query: 283 TSSVTNQGRDE 293
SS T +G+DE
Sbjct: 174 FSSETGEGKDE 184
>gi|295109359|emb|CBL23312.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Ruminococcus
obeum A2-162]
Length = 201
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 96/178 (53%), Gaps = 7/178 (3%)
Query: 117 TEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLV 176
T P GLPE A G+SNVGKSSL+N L+ RK LA TS PGKTQ IN ++IND LV
Sbjct: 15 TSKIPDTGLPEVAFAGKSNVGKSSLINGLMNRKALARTSAQPGKTQTINFYKINDELDLV 74
Query: 177 DLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQ 236
DLPGYGYA + W K ++Y L +VFLLID D + W+ N
Sbjct: 75 DLPGYGYARVTPAEKEKWGKMIENYLHTSHNLKAVFLLIDIRHDPSANDRQMYEWILHNG 134
Query: 237 IPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEI 294
++ TK DK K+ + ++NL +E +Q + I S+ T QGRDEI
Sbjct: 135 YEPIIIATKLDKLKR-----SQVQKNLKAIREGLQ--LRKGTTVIPYSAETKQGRDEI 185
>gi|403237692|ref|ZP_10916278.1| GTP-binding protein YsxC [Bacillus sp. 10403023]
Length = 198
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 88/150 (58%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V A+ V S+V+ E P LPEFAL GRSNVGKSS +N ++ RK LA TS PGKTQ
Sbjct: 2 KVTSADIVISAVKPEQYPEGDLPEFALAGRSNVGKSSFINKMINRKALARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N F IN+ Y VD+PGYGYA ++ R W K + Y R L +V L++D P
Sbjct: 62 LNFFIINELLYFVDVPGYGYAKVSKKEREAWGKMIETYLTTREQLKAVVLIVDLRHPPTN 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D+ + ++P+ ++ TK DK K K
Sbjct: 122 DDVLMYDFAKHYELPVVVIATKADKIPKGK 151
>gi|359411829|ref|ZP_09204294.1| GTP-binding protein engB [Clostridium sp. DL-VIII]
gi|357170713|gb|EHI98887.1| GTP-binding protein engB [Clostridium sp. DL-VIII]
Length = 198
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 87/145 (60%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ ++EF+ S+V+ P D E A VGRSNVGKSSL+NSL RKKLA S+TPGKT+
Sbjct: 2 RIKKSEFITSAVKKNQYPVDNRVEVAFVGRSNVGKSSLINSLTNRKKLAKVSQTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N F IND +YLVDLPGYGYA ++ + W K + Y R L V LL+D+
Sbjct: 62 VNFFLINDDFYLVDLPGYGYAKVSKQEKDSWGKTVEMYLSGREQLKRVVLLVDSRHKPTN 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK 248
D+ W+ + +V TK DK
Sbjct: 122 DDIIMHEWIKHFGYDVIVVATKSDK 146
>gi|303229336|ref|ZP_07316126.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella atypica
ACS-134-V-Col7a]
gi|303231340|ref|ZP_07318074.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella atypica
ACS-049-V-Sch6]
gi|302513936|gb|EFL55944.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella atypica
ACS-049-V-Sch6]
gi|302515872|gb|EFL57824.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella atypica
ACS-134-V-Col7a]
Length = 232
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 113/216 (52%), Gaps = 21/216 (9%)
Query: 98 KYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKT 157
K + ++ A++ S V+ + P E A +GRSNVGKSSL+NSL + LAL S
Sbjct: 20 KEIKGPRIIAAKYNTSCVKADQYPEGDTVEVAFLGRSNVGKSSLINSLCNYRGLALVSGQ 79
Query: 158 PGKTQCINHFRINDS------------WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNR 205
PGKT+ IN+F I W+LVDLPGYG+A ++ R W F DY L+
Sbjct: 80 PGKTKTINYFDIESKEDISETEERRYHWFLVDLPGYGFAKTNKDNRNMWSSFISDYILHS 139
Query: 206 STLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLND 265
L+ + LLID P PID WL + +P+ +V TK DK K E+++N
Sbjct: 140 ERLMLLCLLIDGRHPEMPIDKVAFDWLVEAGVPLQIVVTKVDKLNAK-------EKSVNL 192
Query: 266 FQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQL 301
+ ++ + T P IM SS+ + GR+ + + Q+
Sbjct: 193 AK--VKAMYPTDSPPIMYSSLKHTGRELLQQRINQV 226
>gi|329897111|ref|ZP_08271856.1| GTP-binding protein EngB [gamma proteobacterium IMCC3088]
gi|328921435|gb|EGG28824.1| GTP-binding protein EngB [gamma proteobacterium IMCC3088]
Length = 211
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 89/145 (61%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QAEF+ S+ + CP+D E A GRSN GKSS +NSL + KKLA TSKTPG+TQ +N
Sbjct: 17 QAEFLASAAKFHQCPADLGWEVAFAGRSNAGKSSAINSLTKNKKLARTSKTPGRTQLLNF 76
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F +++ LVDLPGYG+A P ++ W + + Y R++L + LL+D P +P D
Sbjct: 77 FSLSEQQRLVDLPGYGFAKVPVAMKKAWTEQLETYLQERASLKGLILLMDIRHPLQPFDE 136
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKK 251
+ +W +P ++ TK DK K+
Sbjct: 137 QLINWALSADMPCHILLTKADKLKR 161
>gi|148266199|ref|YP_001232905.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter
uraniireducens Rf4]
gi|189037180|sp|A5G964.1|ENGB_GEOUR RecName: Full=Probable GTP-binding protein EngB
gi|146399699|gb|ABQ28332.1| small GTP-binding protein [Geobacter uraniireducens Rf4]
Length = 204
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 84/149 (56%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ EF+KS+ R P+ PE A GRSNVGKSSL+N LV RK L TS TPG+TQ I
Sbjct: 3 IKNVEFIKSATRPAHYPAGDFPEIAFAGRSNVGKSSLINVLVNRKSLVRTSSTPGRTQLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F +N + LVDLPGYG+A P ++ +W + Y RS L V L++D
Sbjct: 63 NFFDVNGEFTLVDLPGYGFARVPLAVKKEWGPMMETYLSKRSNLRGVILILDIRRTPVAE 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D++ WL + +V TKCDK K +
Sbjct: 123 DVQMLHWLRAYSVKPIIVVTKCDKVSKNE 151
>gi|238018910|ref|ZP_04599336.1| hypothetical protein VEIDISOL_00770 [Veillonella dispar ATCC 17748]
gi|237864394|gb|EEP65684.1| hypothetical protein VEIDISOL_00770 [Veillonella dispar ATCC 17748]
Length = 232
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 107/207 (51%), Gaps = 21/207 (10%)
Query: 98 KYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKT 157
K + ++ A++ S V+ + P E A +GRSNVGKSSL+NSL + LAL S
Sbjct: 20 KEPKGPRIIAAKYNTSCVKADQYPEGDTVEIAFIGRSNVGKSSLINSLCNYRGLALVSGQ 79
Query: 158 PGKTQCINHFRINDS------------WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNR 205
PGKT+ IN+F + W+LVDLPGYG+A + R W F DY L+
Sbjct: 80 PGKTKTINYFDVESKEDISETEERRYHWFLVDLPGYGFAKTNKGNRNLWSSFIADYILHS 139
Query: 206 STLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLND 265
L+ + LLID P PID WL + +P+ +V TK DK K+ NL
Sbjct: 140 ERLMLLCLLIDGRHPEMPIDKVAYDWLVEAGVPLQIVVTKVDKLTAKEKSA-----NL-- 192
Query: 266 FQELIQGFFQTAPPWIMTSSVTNQGRD 292
+I+ + TA P I+ SS+ + GR+
Sbjct: 193 --AIIKEMYPTATPPILYSSLKHTGRE 217
>gi|269798315|ref|YP_003312215.1| GTP-binding protein HSR1-like protein [Veillonella parvula DSM
2008]
gi|269094944|gb|ACZ24935.1| GTP-binding protein HSR1-related protein [Veillonella parvula DSM
2008]
Length = 232
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 111/209 (53%), Gaps = 21/209 (10%)
Query: 96 LSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTS 155
+ K A+ ++ A++ S V+ + P E A +GRSNVGKSSL+NSL + LAL S
Sbjct: 18 IRKEAKGPRIIAAKYNTSCVKADQYPEGDTVEIAFLGRSNVGKSSLINSLCNYRGLALVS 77
Query: 156 KTPGKTQCINHFRIND------------SWYLVDLPGYGYAAAPRELRTDWDKFTKDYFL 203
PGKT+ IN+F I +W+LVDLPGYG+A + R W F DY L
Sbjct: 78 GQPGKTKTINYFDIESKEDISETEERRYNWFLVDLPGYGFAKTNKGNRNLWSSFIADYIL 137
Query: 204 NRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENL 263
+ L+ + LLID P ID WL + +P+ +V TK DK K E+++
Sbjct: 138 HSERLMLLCLLIDGRHPEMAIDKVAFDWLVEAGVPLQIVVTKADKLTAK-------EKSV 190
Query: 264 NDFQELIQGFFQTAPPWIMTSSVTNQGRD 292
N +I+ + TA P I+ SS+ + GR+
Sbjct: 191 N--LSIIKELYPTATPPILYSSLKHTGRE 217
>gi|374334346|ref|YP_005091033.1| GTP-binding protein YsxC [Oceanimonas sp. GK1]
gi|372984033|gb|AEY00283.1| GTP-binding protein YsxC [Oceanimonas sp. GK1]
Length = 211
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 91/153 (59%), Gaps = 3/153 (1%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A F+ S+ P+D E A GRSN GKSS LN++ ++K LA TSKTPG+TQ IN F
Sbjct: 11 AHFITSAPNIRQMPADTGVEIAFAGRSNAGKSSALNTITQQKSLARTSKTPGRTQLINVF 70
Query: 168 RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
+++ L+DLPGYGYA P E++ W + +Y R++L + +L+D P K ID +
Sbjct: 71 ELSEGKRLIDLPGYGYAKVPEEMKLKWQEALSEYLQQRTSLKGLVVLMDIRHPLKDIDQQ 130
Query: 228 YASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPE 260
W ++P+ + TKCDK K+G ++ E
Sbjct: 131 LLQWASDCELPVLALLTKCDKL---KSGARKAE 160
>gi|398306533|ref|ZP_10510119.1| GTP-binding protein YsxC [Bacillus vallismortis DV1-F-3]
Length = 195
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 109/202 (53%), Gaps = 11/202 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V ++E V S+V+ E P GLPE AL GRSNVGKSS +NSL+ RK LA TS PGKTQ
Sbjct: 2 KVTKSEIVISAVKPEQYPDGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IND + VD+PGYG+A + R W + + Y +R L +V ++D
Sbjct: 62 LNFYIINDELHFVDVPGYGFAKVSKTEREAWGRMIETYITSREELKAVVQIVDLRHAPSA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP--PWI 281
D++ +L IP+ ++ TK D K P+ + ++++ P I
Sbjct: 122 DDVQMYEFLKYYGIPVIIIATKAD---------KIPKGKWDKHAKVVRQTLNIDPEDELI 172
Query: 282 MTSSVTNQGRDEILLHMAQLRN 303
+ SS T +G+DE + ++ N
Sbjct: 173 LFSSETKKGKDEAWGAIKKMIN 194
>gi|336322813|ref|YP_004602780.1| GTP-binding protein engB [Flexistipes sinusarabici DSM 4947]
gi|336106394|gb|AEI14212.1| GTP-binding protein engB [Flexistipes sinusarabici DSM 4947]
Length = 197
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 82/142 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+AEF+ S+ T P LPE A +GRSNVGKSS++N+L+ RKKL TPGKT+ IN
Sbjct: 2 KAEFITSAADTGGFPETSLPEIAFIGRSNVGKSSMINALLGRKKLVKVGNTPGKTKLINF 61
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I D + VDLPGYGYA + R W + ++Y R L + L+ID D
Sbjct: 62 FNIEDKYIFVDLPGYGYAKTSKAERKKWGRLIENYLKARKQLKACVLIIDIRRIPSGDDF 121
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
WL +N+IP+ L TK DK
Sbjct: 122 LMIEWLSENEIPIILTATKKDK 143
>gi|406026623|ref|YP_006725455.1| ribosome biogenesis GTP-binding protein [Lactobacillus buchneri
CD034]
gi|405125112|gb|AFR99872.1| ribosome biogenesis GTP-binding protein [Lactobacillus buchneri
CD034]
Length = 195
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V + S+V + P+ PE ALVGRSNVGKSSL N L+ R K A TS PGKTQ
Sbjct: 2 EVHNVDLTISAVAEKQYPNTQFPEIALVGRSNVGKSSLTNVLINRNKFARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + I D Y VD+PGYGYA A + R W + + Y R L V L+D
Sbjct: 62 LNFYNIEDKLYFVDVPGYGYAKASKASREKWGRMIETYLTKREQLRGVITLVDGRHAPTA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQ--TAPPWI 281
D+ +WL IPM V TK DK K N + LI+ Q P I
Sbjct: 122 DDVSMHNWLKYYNIPMLTVATKMDKISSGK---------WNKQESLIKKTLQLDADEPLI 172
Query: 282 MTSSVTNQGRDEI 294
+ S++T G++EI
Sbjct: 173 LFSALTKTGKNEI 185
>gi|398311679|ref|ZP_10515153.1| GTP-binding protein YsxC [Bacillus mojavensis RO-H-1]
Length = 195
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 104/192 (54%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V ++E V S+V+ E P GLPE AL GRSNVGKSS +NSL+ RK LA TS PGKTQ
Sbjct: 2 KVTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IND + VD+PGYG+A + R W + + Y R L +V ++D
Sbjct: 62 LNFYIINDELHFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSN 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP--PWI 281
D++ +L IP+ ++ TK D K P+ + ++++ P I
Sbjct: 122 DDVQMYEFLKYYGIPVIIIATKAD---------KIPKGKWDKHAKVVRQTLNIDPEDELI 172
Query: 282 MTSSVTNQGRDE 293
+ SS T +G+DE
Sbjct: 173 LYSSETKKGKDE 184
>gi|126463487|ref|YP_001044601.1| ribosome biogenesis GTP-binding protein YsxC [Rhodobacter
sphaeroides ATCC 17029]
gi|332559540|ref|ZP_08413862.1| GTP-binding protein YsxC [Rhodobacter sphaeroides WS8N]
gi|126105151|gb|ABN77829.1| GTP-binding protein, HSR1-related [Rhodobacter sphaeroides ATCC
17029]
gi|332277252|gb|EGJ22567.1| GTP-binding protein YsxC [Rhodobacter sphaeroides WS8N]
Length = 217
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 100/193 (51%), Gaps = 5/193 (2%)
Query: 109 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFR 168
+FVK E P E GRSNVGKSSL+N+L RK LA S TPG+TQ IN+F
Sbjct: 29 DFVKGVTTMEALPPADRIEVCFAGRSNVGKSSLINALTGRKSLARASNTPGRTQEINYFA 88
Query: 169 INDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEY 228
+ S YLVDLPGYGYA AP+ + W + K Y R TL F+LID K +D E
Sbjct: 89 LGPSRYLVDLPGYGYAEAPKPIVERWQRLLKGYLAGRQTLRRAFVLIDTRHGVKSVDEEI 148
Query: 229 ASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTN 288
+ L ++ + +V TK DK + + E L+ + ++ P +MTSS
Sbjct: 149 LTLLDRSAVTFQVVMTKADKVSQAER-----EAVLDQVRGALKKHPAAYPELVMTSSEKG 203
Query: 289 QGRDEILLHMAQL 301
G + + +A L
Sbjct: 204 MGIETLRTIVATL 216
>gi|260101783|ref|ZP_05752020.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
helveticus DSM 20075]
gi|260084427|gb|EEW68547.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
helveticus DSM 20075]
Length = 196
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 91/147 (61%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ + + S+VR + P D LPE AL GRSNVGKSSL+N+L+ RK LA TS PGKTQ +
Sbjct: 3 IKSSNYAVSAVREDQYPKDNLPEIALSGRSNVGKSSLINTLLNRKNLARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + IND +YLVD+PGYGYA ++ R ++ + +DY R L + +LID+
Sbjct: 63 NFYLINDEFYLVDVPGYGYARVSQKKRQEFGEMIQDYLETRPNLKGLVILIDSRHEPTKD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKK 251
D+ ++ +P+ +V TK DK KK
Sbjct: 123 DIAMYNYAQYLNLPILVVCTKIDKIKK 149
>gi|254427895|ref|ZP_05041602.1| GTPase, putative [Alcanivorax sp. DG881]
gi|196194064|gb|EDX89023.1| GTPase, putative [Alcanivorax sp. DG881]
Length = 203
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 85/144 (59%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA F++S+ R + CP D E A GRSN GKSS +N L ++ LA TSKTPG+TQ +N
Sbjct: 12 QALFLQSAQRLDQCPPDEGLEVAFAGRSNAGKSSAINRLTSQRTLARTSKTPGRTQLLNF 71
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F++++ LVDLPGYGYA + R +W + Y R LV + L++D P K DL
Sbjct: 72 FQLDEERRLVDLPGYGYAKVAKSTRNEWQQHLDHYLSERQALVGLVLMMDIRHPLKDFDL 131
Query: 227 EYASWLGQNQIPMTLVFTKCDKRK 250
W Q +P+ ++ TK DK K
Sbjct: 132 LMLEWSAQANMPIHILMTKADKLK 155
>gi|161507350|ref|YP_001577304.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
helveticus DPC 4571]
gi|172048268|sp|A8YUS5.1|ENGB_LACH4 RecName: Full=Probable GTP-binding protein EngB
gi|160348339|gb|ABX27013.1| GTP-binding protein [Lactobacillus helveticus DPC 4571]
Length = 196
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 91/147 (61%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ + + S+VR + P D LPE AL GRSNVGKSSL+N+L+ RK LA TS PGKTQ +
Sbjct: 3 IKSSNYAVSAVREDQYPKDNLPEIALSGRSNVGKSSLINTLLNRKNLARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + IND +YLVD+PGYGYA ++ R ++ + +DY R L + +LID+
Sbjct: 63 NFYLINDEFYLVDVPGYGYARVSQKKRQEFGEMIQDYLETRPNLKGLVILIDSRHEPTKD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKK 251
D+ ++ +P+ +V TK DK KK
Sbjct: 123 DIAMYNYAQYLNLPILVVCTKIDKIKK 149
>gi|77464647|ref|YP_354151.1| ribosome biogenesis GTP-binding protein YsxC [Rhodobacter
sphaeroides 2.4.1]
gi|119369248|sp|Q3IYY4.1|ENGB_RHOS4 RecName: Full=Probable GTP-binding protein EngB
gi|77389065|gb|ABA80250.1| Probable GTP-binding protein [Rhodobacter sphaeroides 2.4.1]
Length = 217
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 100/193 (51%), Gaps = 5/193 (2%)
Query: 109 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFR 168
+FVK E P E GRSNVGKSSL+N+L RK LA S TPG+TQ IN+F
Sbjct: 29 DFVKGVTTMEALPPADRIEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINYFA 88
Query: 169 INDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEY 228
+ S YLVDLPGYGYA AP+ + W + K Y R TL F+LID K +D E
Sbjct: 89 LGPSRYLVDLPGYGYAEAPKPIVQRWQRLLKGYLAGRQTLRRAFVLIDTRHGVKSVDEEI 148
Query: 229 ASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTN 288
+ L ++ + +V TK DK + + E L+ + ++ P +MTSS
Sbjct: 149 LTLLDRSAVTFQVVMTKADKVSQAER-----EAVLDQVRGALKKHPAAYPELVMTSSEKG 203
Query: 289 QGRDEILLHMAQL 301
G + + +A L
Sbjct: 204 MGIETLRTIVATL 216
>gi|389694014|ref|ZP_10182108.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Microvirga sp.
WSM3557]
gi|388587400|gb|EIM27693.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Microvirga sp.
WSM3557]
Length = 218
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+A+F+ ++ ++ P E A GRSNVGKSSL+N+L R LA TS TPG+TQ +
Sbjct: 20 AGEADFIWAANSLKNLPPMSKVEIAFAGRSNVGKSSLVNALTGRNTLARTSHTPGRTQQL 79
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F +ND ++LVD+PGYGYAA ++ W + DY R++L V++LIDA KP+
Sbjct: 80 NFFNVNDRFHLVDMPGYGYAAVDKQKVAAWTQLIHDYLRGRASLARVYVLIDARHGIKPV 139
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D LG + +V TK D+ K + KR + L ++ F P + TS
Sbjct: 140 DEAVLETLGTAAVSYQIVLTKADELKPDEL-DKRMADTLQKIEKRAAAF----PEILPTS 194
Query: 285 SVTNQGRDEILLHMAQL 301
S T G E+ +A+L
Sbjct: 195 SRTGFGIPELRAGIARL 211
>gi|257884403|ref|ZP_05664056.1| GTP-binding protein [Enterococcus faecium 1,231,501]
gi|257820241|gb|EEV47389.1| GTP-binding protein [Enterococcus faecium 1,231,501]
Length = 195
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 105/199 (52%), Gaps = 11/199 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V QAE + S+V + P LPE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ
Sbjct: 2 KVHQAEIIISAVAPKQYPETQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + I ++ + VD+PGYGYA + R W K + Y R L +V L+D
Sbjct: 62 LNFYLIENALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTREQLRAVVSLVDLRHKPSQ 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWI 281
D++ +L IP+ +V TK D K P N ++ I+ F +I
Sbjct: 122 EDIQMYQFLKYYDIPVIVVATKAD---------KIPRGKWNKYESEIKKALDFDHNDTFI 172
Query: 282 MTSSVTNQGRDEILLHMAQ 300
+ SSVT QG++E + Q
Sbjct: 173 LFSSVTKQGKEEAWAAIEQ 191
>gi|221640559|ref|YP_002526821.1| ribosome biogenesis GTP-binding protein YsxC [Rhodobacter
sphaeroides KD131]
gi|429207206|ref|ZP_19198465.1| GTP-binding protein EngB [Rhodobacter sp. AKP1]
gi|221161340|gb|ACM02320.1| GTP-binding protein engB [Rhodobacter sphaeroides KD131]
gi|428189581|gb|EKX58134.1| GTP-binding protein EngB [Rhodobacter sp. AKP1]
Length = 217
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 100/193 (51%), Gaps = 5/193 (2%)
Query: 109 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFR 168
+FVK E P E GRSNVGKSSL+N+L RK LA S TPG+TQ IN+F
Sbjct: 29 DFVKGVTTMEALPPADRIEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINYFA 88
Query: 169 INDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEY 228
+ S YLVDLPGYGYA AP+ + W + K Y R TL F+LID K +D E
Sbjct: 89 LGPSRYLVDLPGYGYAEAPKPIVERWQRLLKGYLAGRQTLRRAFVLIDTRHGVKSVDEEI 148
Query: 229 ASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTN 288
+ L ++ + +V TK DK + + E L+ + ++ P +MTSS
Sbjct: 149 LTLLDRSAVTFQVVMTKADKVSQAER-----EAVLDQVRGALKKHPAAYPELVMTSSEKG 203
Query: 289 QGRDEILLHMAQL 301
G + + +A L
Sbjct: 204 MGIETLRTIVATL 216
>gi|89098931|ref|ZP_01171811.1| GTP-binding protein [Bacillus sp. NRRL B-14911]
gi|89086335|gb|EAR65456.1| GTP-binding protein [Bacillus sp. NRRL B-14911]
Length = 195
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V AE V S+V+ P + LPEFAL GRSNVGKSS +N ++ RK LA TS PGKTQ
Sbjct: 2 KVNSAEIVISAVKPAQYPEESLPEFALAGRSNVGKSSFINKMLNRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IN+ + VD+PGYGYA ++ R W + + YF +R L + L++D P
Sbjct: 62 LNFYLINEMMHFVDVPGYGYAKVSKKEREAWGRMIETYFTSREQLKAAVLIVDLRHPPTK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+ +L + I ++ TK DK + K++ K +E L + +
Sbjct: 122 DDIMMYDFLKHHGIRCIIIATKADKIPKTKRQKHFKITKETLE---------LEPGDDIV 172
Query: 282 MTSSVTNQGRDE 293
+ SS T +G+DE
Sbjct: 173 LFSSETGEGKDE 184
>gi|331701127|ref|YP_004398086.1| GTP-binding protein engB [Lactobacillus buchneri NRRL B-30929]
gi|329128470|gb|AEB73023.1| GTP-binding protein engB [Lactobacillus buchneri NRRL B-30929]
Length = 195
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V + S+V + P+ PE ALVGRSNVGKSSL N L+ R K A TS PGKTQ
Sbjct: 2 EVHNVDLTISAVAEKQYPNTQFPEIALVGRSNVGKSSLTNVLINRNKFARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + I D Y VD+PGYGYA A + R W + + Y R L V L+D
Sbjct: 62 LNFYNIEDKLYFVDVPGYGYAKASKASREKWGRMIETYLTKREQLRGVITLVDGRHAPTD 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQ--TAPPWI 281
D+ +WL IPM V TK DK K N + LI+ Q P I
Sbjct: 122 DDVSMHNWLKYYNIPMLTVATKMDKISSGK---------WNKQESLIKKTLQLDAYEPLI 172
Query: 282 MTSSVTNQGRDEI 294
+ S++T G++EI
Sbjct: 173 LFSALTKTGKNEI 185
>gi|403384274|ref|ZP_10926331.1| GTP-binding protein [Kurthia sp. JC30]
Length = 206
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 99/192 (51%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V + + S+VR E P DG PEFAL GRSNVGKSS +N ++ RK LA S PGKTQ
Sbjct: 2 KVHNVDMIMSAVRPEQYPEDGYPEFALAGRSNVGKSSFINRMIGRKALARISAKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N ++I + + VD+PGYGYA + R W K + Y R L +V +ID
Sbjct: 62 LNFYKIEEQLFFVDVPGYGYAKVSKSEREAWGKMIETYLTGRRPLKAVVQIIDLRHEPSD 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP--PWI 281
D +L IP L+ TK DK KK K NL ++I+ P P I
Sbjct: 122 DDCMMYDFLKHYGIPTILIATKADKVKKGKWA-----HNL----KVIKNVLDKDPSDPII 172
Query: 282 MTSSVTNQGRDE 293
+ SS T G DE
Sbjct: 173 LFSSETGMGYDE 184
>gi|417007052|ref|ZP_11945261.1| GTP-binding protein YsxC [Lactobacillus helveticus MTCC 5463]
gi|328468551|gb|EGF39553.1| GTP-binding protein YsxC [Lactobacillus helveticus MTCC 5463]
Length = 194
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 92/149 (61%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ + + S+VR + P D LPE AL GRSNVGKSSL+N+L+ RK LA TS PGKTQ +
Sbjct: 3 IKSSNYAVSAVREDQYPKDNLPEIALSGRSNVGKSSLINTLLNRKNLARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + IND +YLVD+PGYGYA ++ R ++ + +DY R L + +LID+
Sbjct: 63 NFYLINDEFYLVDVPGYGYARVSQKKRQEFGEMIQDYLETRPNLKGLVILIDSRHEPTKD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D+ ++ +P+ +V TK DK KK +
Sbjct: 123 DIAMYNYAQYLNLPILVVCTKIDKIKKSQ 151
>gi|296331634|ref|ZP_06874103.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305675407|ref|YP_003867079.1| ribosome biogenesis GTP-binding protein [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151229|gb|EFG92109.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305413651|gb|ADM38770.1| putative ribosome biogenesis GTP-binding protein [Bacillus subtilis
subsp. spizizenii str. W23]
Length = 195
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 109/202 (53%), Gaps = 11/202 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V ++E V S+V+ E P GLPE AL GRSNVGKSS +NSL+ RK LA TS PGKTQ
Sbjct: 2 KVTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IND+ + VD+PGYG+A + R W + + Y R L +V ++D
Sbjct: 62 LNFYIINDALHFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSN 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP--PWI 281
D++ +L IP+ ++ TK D K P+ + ++++ P I
Sbjct: 122 DDVQMYEFLKYYGIPVIVIATKAD---------KIPKGKWDKHAKVVRQTLNIDPEDELI 172
Query: 282 MTSSVTNQGRDEILLHMAQLRN 303
+ SS T +G+DE + ++ N
Sbjct: 173 LFSSETKKGKDEAWGAIKKMIN 194
>gi|295397567|ref|ZP_06807646.1| ribosome biogenesis GTP-binding protein YsxC [Aerococcus viridans
ATCC 11563]
gi|294974191|gb|EFG49939.1| ribosome biogenesis GTP-binding protein YsxC [Aerococcus viridans
ATCC 11563]
Length = 201
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 108/189 (57%), Gaps = 7/189 (3%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V EF+ S+VR E P+ +PE AL GRSNVGKSS +N+++ RKKLA TS PGKTQ +
Sbjct: 3 VHNVEFLISAVRPEQYPAPIIPEIALAGRSNVGKSSFINTMINRKKLARTSSKPGKTQQL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N+++I D +Y VD+PGYGYA + + W + + YF R L L++D
Sbjct: 63 NYYQIEDLFYFVDVPGYGYARVSKTEKAKWGEMLETYFATRENLALALLIVDFRHKPTKD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D++ ++ + +P ++ TK DK KK + ++L+D + ++ ++ + S
Sbjct: 123 DIQMKEFMDYHGVPYFVIATKTDKIKKSQWN-----KHLSDIYKTLE--LESIDQILPFS 175
Query: 285 SVTNQGRDE 293
+ T GRDE
Sbjct: 176 AETKDGRDE 184
>gi|150016213|ref|YP_001308467.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
beijerinckii NCIMB 8052]
gi|189037172|sp|A6LT31.1|ENGB_CLOB8 RecName: Full=Probable GTP-binding protein EngB
gi|149902678|gb|ABR33511.1| GTP-binding protein, HSR1-related [Clostridium beijerinckii NCIMB
8052]
Length = 198
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 103/194 (53%), Gaps = 11/194 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +++F+ S+V+ P D E A VGRSNVGKSSL+NSL RKKLA S+TPGKT+
Sbjct: 2 RIKKSDFITSAVKKNQYPIDNRVEVAFVGRSNVGKSSLINSLTNRKKLAKVSQTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N F IND +YLVDLPGYGYA + + W K + Y R L V LL+D+
Sbjct: 62 VNFFLINDDFYLVDLPGYGYAKVSKAEKDSWGKTVEMYLTGREQLKRVVLLVDSRHKPTG 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+ W+ + +V TK DK R + K K +E L +
Sbjct: 122 DDIIMHEWIKHFGYDVIVVATKSDKLTRNELKKNEKVIKETLK---------LNSDDKLY 172
Query: 282 MTSSVTNQGRDEIL 295
SS+ G+DE++
Sbjct: 173 FFSSLNKDGKDELI 186
>gi|389878568|ref|YP_006372133.1| ribosome biogenesis GTP-binding protein YsxC [Tistrella mobilis
KA081020-065]
gi|388529352|gb|AFK54549.1| ribosome biogenesis GTP-binding protein YsxC [Tistrella mobilis
KA081020-065]
Length = 221
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 99/192 (51%), Gaps = 5/192 (2%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
FV + D P D LPE A GRSNVGKSSL+N+L R LA S TPG+TQ +N FR
Sbjct: 27 FVMGAASLRDLPPDELPEIAFAGRSNVGKSSLINALTERGNLARVSNTPGRTQQLNFFRF 86
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
D +VD+PGYGYA AP+ + W K Y RS L V++LID K D E
Sbjct: 87 ADRMMMVDMPGYGYAEAPKAMVKAWQKMVFSYLRGRSNLARVYVLIDGRHGVKENDREVF 146
Query: 230 SWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQ 289
L + +V TK DK +K KR + + + + + P I+TSS +
Sbjct: 147 KLLDDAAVSYQVVVTKADK-EKAPVLAKRLQAIETELRRHVAAY----PEVIVTSSRKMR 201
Query: 290 GRDEILLHMAQL 301
G + + +A+L
Sbjct: 202 GMETLRAAIARL 213
>gi|225848212|ref|YP_002728375.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225644647|gb|ACN99697.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 194
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 89/144 (61%), Gaps = 1/144 (0%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ EF+KS+V+ ED P PE A+VGRSNVGKSSL+N++ +R +A S TPGKT+ I
Sbjct: 3 IKSVEFIKSAVKPEDYPPPDKPEVAVVGRSNVGKSSLINAIFKRS-VAKVSSTPGKTRLI 61
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F +N+ Y VDLPGYG+A+ ++ R W K ++Y LNR L + +L+D P +
Sbjct: 62 NFFTLNNDIYFVDLPGYGFASVSQKERLSWQKMIENYLLNRENLKLIIMLVDTRYPPTNL 121
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK 248
D+ WL + +V TK DK
Sbjct: 122 DILMKQWLDTFEKQYFVVGTKIDK 145
>gi|89053125|ref|YP_508576.1| ribosome biogenesis GTP-binding protein YsxC [Jannaschia sp. CCS1]
gi|119369206|sp|Q28UR1.1|ENGB_JANSC RecName: Full=Probable GTP-binding protein EngB
gi|88862674|gb|ABD53551.1| GTP-binding protein [Jannaschia sp. CCS1]
Length = 218
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 95/182 (52%), Gaps = 5/182 (2%)
Query: 109 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFR 168
+F+K V + P E GRSNVGKS+L+N+L RK LA S TPG+TQ IN+F
Sbjct: 29 DFLKGVVAMDGLPPADRIEVCFAGRSNVGKSTLINALTGRKGLARASNTPGRTQEINYFT 88
Query: 169 INDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEY 228
+ DS YLVDLPGYGYA AP + W K Y R+TL F+LIDA K +D E
Sbjct: 89 LLDSHYLVDLPGYGYAEAPLHVVQQWQALLKSYLQGRATLRRAFVLIDARHGVKAVDEEI 148
Query: 229 ASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTN 288
L +P V TK DK K G+ + +L ++ + P I+TSS
Sbjct: 149 MKLLDIAAVPFQTVLTKSDKVK-----GRDRDASLARTRKALANHPAAYPEIILTSSEKG 203
Query: 289 QG 290
G
Sbjct: 204 DG 205
>gi|225028674|ref|ZP_03717866.1| hypothetical protein EUBHAL_02953 [Eubacterium hallii DSM 3353]
gi|224953984|gb|EEG35193.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium hallii
DSM 3353]
Length = 197
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 100/178 (56%), Gaps = 7/178 (3%)
Query: 117 TEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLV 176
T P + LPE A G+SNVGKSSL+N+LV RK LA TS PGKTQ IN + +N+ Y+V
Sbjct: 15 TSKLPKNTLPEVAFAGKSNVGKSSLINALVNRKSLARTSGQPGKTQTINFYNVNEEMYIV 74
Query: 177 DLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQ 236
DLPGYGYA +E+ W ++Y L VFLLID D++ W+ N
Sbjct: 75 DLPGYGYAKVSKEVAAKWGPMIENYLHTSEQLRMVFLLIDLRHKPTNNDVQMYRWILSNG 134
Query: 237 IPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEI 294
+V TK DK K+ + ++ + L D ++I+G P + S+VT GRDEI
Sbjct: 135 FSPVIVATKADKIKRSQL--QKQLKLLKDTLKVIEGV-----PIVPFSAVTKAGRDEI 185
>gi|423204420|ref|ZP_17190976.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas veronii
AMC34]
gi|404627285|gb|EKB24090.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas veronii
AMC34]
Length = 218
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 81/142 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+ FV S+ P+DG E A GRSN GKSS LN+L + K LA TSKTPG+TQ IN
Sbjct: 10 KVHFVTSAPDIRHLPNDGGVEIAFAGRSNAGKSSALNTLTKHKNLARTSKTPGRTQLINL 69
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + LVDLPGYGYA P E++ W K +Y R +L + +L+D P K D+
Sbjct: 70 FELEPGKRLVDLPGYGYAQVPLEMKLKWQKSLAEYLQRRESLKGLVILMDIRHPLKDTDM 129
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
W Q+P+ L+ TK DK
Sbjct: 130 NMLEWSSHRQLPVMLLLTKADK 151
>gi|410943107|ref|ZP_11374848.1| GTP-binding protein YsxC [Gluconobacter frateurii NBRC 101659]
Length = 222
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 103/199 (51%), Gaps = 5/199 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ EF S + E P G PE A GRSNVGKSS++N+L RK LA S PG+T+ +
Sbjct: 21 AGECEFFFGSQKIEQLPPVGRPEVAFAGRSNVGKSSIINALTGRKALARASSEPGRTKQL 80
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F ++D LVD+PGYG+A A + ++ DW Y R+TL V LL+DA I K
Sbjct: 81 NFFNLSDRISLVDMPGYGFAKAAKSVKEDWQNMMFAYLRGRTTLARVILLLDARIELKAS 140
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D + L + + +V TKCD+ + K + D + L P + TS
Sbjct: 141 DKDVMELLDRAAVVFQIVLTKCDQVRPNALKAK-----IADVEALALKHAAAYPRIVCTS 195
Query: 285 SVTNQGRDEILLHMAQLRN 303
S T +G +++ +A+ +
Sbjct: 196 SQTGEGIEDLRAEIARFAD 214
>gi|350266992|ref|YP_004878299.1| GTP-binding protein [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|386759377|ref|YP_006232593.1| GTP-binding protein [Bacillus sp. JS]
gi|349599879|gb|AEP87667.1| GTP-binding protein [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|384932659|gb|AFI29337.1| GTP-binding protein [Bacillus sp. JS]
Length = 195
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 108/202 (53%), Gaps = 11/202 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V ++E V S+V+ E P GLPE AL GRSNVGKSS +NSL+ RK LA TS PGKTQ
Sbjct: 2 KVTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IND + VD+PGYG+A + R W + + Y R L +V ++D
Sbjct: 62 LNFYIINDELHFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSN 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP--PWI 281
D++ +L IP+ ++ TK D K P+ + ++++ P I
Sbjct: 122 DDVQMYEFLKYYGIPVIIIATKAD---------KIPKGKWDKHAKVVRQTLNIDPEDELI 172
Query: 282 MTSSVTNQGRDEILLHMAQLRN 303
+ SS T +G+DE + ++ N
Sbjct: 173 LFSSETKKGKDEAWGAIKKMIN 194
>gi|110678769|ref|YP_681776.1| ribosome biogenesis GTP-binding protein YsxC [Roseobacter
denitrificans OCh 114]
gi|119369250|sp|Q16AA3.1|ENGB_ROSDO RecName: Full=Probable GTP-binding protein EngB
gi|109454885|gb|ABG31090.1| GTP-binding protein [Roseobacter denitrificans OCh 114]
Length = 216
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 94/185 (50%), Gaps = 5/185 (2%)
Query: 106 AQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCIN 165
EFVK V P E GRSNVGKSSL+N+L RK LA S TPG+TQ IN
Sbjct: 25 GDTEFVKGVVAMSGLPDPDRLEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRTQEIN 84
Query: 166 HFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPID 225
F +S YLVDLPGYGYA AP + W + K Y R TL F+LIDA K +D
Sbjct: 85 FFTAGESHYLVDLPGYGYANAPVPVVEKWQRLLKQYLSGRQTLRRAFVLIDARHGVKKVD 144
Query: 226 LEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSS 285
E S L + +V TK DK K+K+ E+ L+ + + P ++TSS
Sbjct: 145 EEILSLLDSAAVTFQVVLTKADKVKEKER-----EKVLDQVRTALSKHPAAFPELVITSS 199
Query: 286 VTNQG 290
G
Sbjct: 200 EKGWG 204
>gi|406675270|ref|ZP_11082459.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas veronii
AMC35]
gi|423203186|ref|ZP_17189764.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas veronii
AER39]
gi|404613415|gb|EKB10437.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas veronii
AER39]
gi|404627602|gb|EKB24402.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas veronii
AMC35]
Length = 218
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 81/142 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+ FV S+ P+DG E A GRSN GKSS LN+L + K LA TSKTPG+TQ IN
Sbjct: 10 KVHFVTSAPDIRHLPNDGGVEIAFAGRSNAGKSSALNTLTKHKNLARTSKTPGRTQLINL 69
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + LVDLPGYGYA P E++ W K +Y R +L + +L+D P K D+
Sbjct: 70 FELEPGKRLVDLPGYGYAQVPLEMKLKWQKSLAEYLQRRESLKGLVILMDIRHPLKDTDM 129
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
W Q+P+ L+ TK DK
Sbjct: 130 NMLEWSSHRQLPVMLLLTKADK 151
>gi|392989333|ref|YP_006487926.1| GTP-binding protein YsxC [Enterococcus hirae ATCC 9790]
gi|392336753|gb|AFM71035.1| GTP-binding protein YsxC [Enterococcus hirae ATCC 9790]
Length = 195
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 102/192 (53%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V QAE V S+V + P LPE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ
Sbjct: 2 KVHQAEIVISAVAPKQYPESDLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + I ++ + VD+PGYGYA + R W K + Y R L +V L+D
Sbjct: 62 LNFYLIENALHFVDVPGYGYAKVSKTERAKWGKMIETYITTREQLRAVVSLVDLRHKPSQ 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWI 281
D++ +L IP+ +V TK D K P N + I+ F +I
Sbjct: 122 EDIQMYEFLKYYDIPVIVVATKAD---------KIPRGKWNKHESEIKKALDFDNNDQFI 172
Query: 282 MTSSVTNQGRDE 293
+ SSVT QG++E
Sbjct: 173 LFSSVTKQGKEE 184
>gi|30250379|ref|NP_842449.1| ribosome biogenesis GTP-binding protein YsxC [Nitrosomonas europaea
ATCC 19718]
gi|81584537|sp|Q82S94.1|ENGB_NITEU RecName: Full=Probable GTP-binding protein EngB
gi|30181174|emb|CAD86370.1| putative GTP-binding protein [Nitrosomonas europaea ATCC 19718]
Length = 222
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 83/147 (56%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
AEF + R +D P E A GRSN GKSS +N+LV R++ A SKTPG+TQ IN
Sbjct: 8 HAEFYTTVNRLQDLPQTAGVEVAFAGRSNAGKSSAINTLVGRERFAFVSKTPGRTQHINF 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F++ + ++VDLPGYGYA P +R W Y R +L + L++D P +DL
Sbjct: 68 FQLGEERFMVDLPGYGYAQVPLAIRQHWGHLLSSYLQTRQSLYGMILIMDIRHPLTKLDL 127
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKK 253
+ W Q + P+ ++ TK DK K +
Sbjct: 128 QMLDWFRQTKKPVHVLLTKADKLSKSR 154
>gi|423211849|ref|ZP_17198382.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas veronii
AER397]
gi|404612650|gb|EKB09708.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas veronii
AER397]
Length = 218
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 81/142 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+ FV S+ P+DG E A GRSN GKSS LN+L + K LA TSKTPG+TQ IN
Sbjct: 10 KVHFVTSAPDIRHLPNDGGVEIAFAGRSNAGKSSALNTLTKHKNLARTSKTPGRTQLINL 69
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + LVDLPGYGYA P E++ W K +Y R +L + +L+D P K D+
Sbjct: 70 FELEPGKRLVDLPGYGYAQVPLEMKLKWQKSLAEYLQRRESLKGLVILMDIRHPLKDTDM 129
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
W Q+P+ L+ TK DK
Sbjct: 130 NMLEWSSHRQLPVMLLLTKADK 151
>gi|255528414|ref|ZP_05395213.1| GTP-binding protein HSR1-related protein [Clostridium
carboxidivorans P7]
gi|296184881|ref|ZP_06853292.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
carboxidivorans P7]
gi|255507895|gb|EET84336.1| GTP-binding protein HSR1-related protein [Clostridium
carboxidivorans P7]
gi|296050663|gb|EFG90086.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
carboxidivorans P7]
Length = 195
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 106/201 (52%), Gaps = 9/201 (4%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ Q+EFV S+V P D E A VGRSNVGKSSL+N+LV R+KL S TPGKT+
Sbjct: 2 EIKQSEFVISAVVPNQYPQDNRVEIAFVGRSNVGKSSLINTLVNRRKLVKVSGTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N F IN+ +Y VDLPGYGYA + + W K + Y R L V LL+D
Sbjct: 62 VNFFLINNEFYFVDLPGYGYAKVSKSEKESWGKVIERYLTGREQLKKVMLLVDCRHKPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D+ W+ +V TK DK KK + +NL +E F + I+T
Sbjct: 122 DDIIMYKWIKHYNYDAIIVATKIDKLKKAE-----LRKNLKVIRE---TFELSDDEEILT 173
Query: 284 -SSVTNQGRDEILLHMAQLRN 303
SS+ G++E+L + Q N
Sbjct: 174 FSSLKKLGKEELLDAIEQCIN 194
>gi|217977386|ref|YP_002361533.1| ribosome biogenesis GTP-binding protein YsxC [Methylocella
silvestris BL2]
gi|217502762|gb|ACK50171.1| GTP-binding protein HSR1-related [Methylocella silvestris BL2]
Length = 226
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 110/202 (54%), Gaps = 10/202 (4%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
A+ +F+ ++ P G PE A GRSNVGKSSLLN+L RK LA TS TPG+T+ +
Sbjct: 24 AAECDFLWAASSVASLPPPGAPEIAFAGRSNVGKSSLLNALTNRKSLARTSHTPGRTREL 83
Query: 165 NHF----RINDS-WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASI 219
N F I+D+ LVD+PGYGYAAA +E W + +DY R+ L+ F+LID
Sbjct: 84 NFFGLGGGIDDARLRLVDMPGYGYAAASKEQIASWTQLMQDYLRGRAPLLRAFVLIDGRH 143
Query: 220 PAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPP 279
KP D E L + + +V TK D+ K+ + +R EE L ++ + P
Sbjct: 144 GLKPPDYEMMDLLDRCALSYQIVLTKQDE-VKEADAARRIEETLKAIEKRPAAY----PQ 198
Query: 280 WIMTSSVTNQGRDEILLHMAQL 301
I TSS T G E+ +A+L
Sbjct: 199 AIFTSSRTADGVAELRAAIARL 220
>gi|302671760|ref|YP_003831720.1| GTP-binding protein [Butyrivibrio proteoclasticus B316]
gi|302396233|gb|ADL35138.1| GTP-binding protein [Butyrivibrio proteoclasticus B316]
Length = 200
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 104/188 (55%), Gaps = 13/188 (6%)
Query: 117 TEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLV 176
T P + PEFA G+SNVGKSSL+N ++ RK A TS+ PGKTQ IN++ IND +YLV
Sbjct: 15 TSTLPDNIHPEFAFAGKSNVGKSSLINGIMNRKNYARTSQEPGKTQTINYYNINDEFYLV 74
Query: 177 DLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQ 236
DLPGYG+A P +++ W K ++Y L+ VFLLID D++ W+
Sbjct: 75 DLPGYGFARVPEKVKEQWGKMIENYLHTSRQLLRVFLLIDIRHEPSANDVQMYKWIVHQG 134
Query: 237 IPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT---SSVTNQGRDE 293
++ TK DK KK ++ E++LN + + P I S+++ +GR E
Sbjct: 135 FQPVIIATKSDKIKKSQH-----EKHLNMLRNTL-----GLPDEIKIFPYSALSKEGRQE 184
Query: 294 ILLHMAQL 301
I M +L
Sbjct: 185 IYDFMDEL 192
>gi|452749938|ref|ZP_21949695.1| GTP-binding protein YsxC [Pseudomonas stutzeri NF13]
gi|452006247|gb|EMD98522.1| GTP-binding protein YsxC [Pseudomonas stutzeri NF13]
Length = 228
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA F+ S+ + + CP+D E A GRSN GKSS LN+L LA TSKTPG+TQ +N
Sbjct: 24 QASFMISAAKVDQCPADEGLEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNF 82
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
FR++D LVDLPGYGYA P L+ W + + Y +R +L VFL++D P D
Sbjct: 83 FRLDDDRRLVDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLAGVFLMMDIRHPLTEFDR 142
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
W +Q+P+ ++ TK DK
Sbjct: 143 MMLDWASASQMPLHILLTKSDK 164
>gi|51246489|ref|YP_066373.1| hypothetical protein DP2637 [Desulfotalea psychrophila LSv54]
gi|81641346|sp|Q6AJW0.1|ENGB_DESPS RecName: Full=Probable GTP-binding protein EngB
gi|50877526|emb|CAG37366.1| conserved hypothetical GTP-binding protein [Desulfotalea
psychrophila LSv54]
Length = 193
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
F+ S + P DGLPEFA GRSNVGKSSL+N+L+RR S PGKTQ +N F+
Sbjct: 8 FLLSVHGLDQLPEDGLPEFAFAGRSNVGKSSLMNTLLRRSGFVKVSGRPGKTQGLNFFQA 67
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
+ LVDLPGYG+A +E++ +W K Y R L V ++ID K +D +
Sbjct: 68 AEDCMLVDLPGYGFARVSKEMQNNWQKLITSYISEREALKCVVVIIDIRHEPKALDRQLL 127
Query: 230 SWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQ 289
WL + ++P+ ++TK DK N R L+ G I+ SS T Q
Sbjct: 128 DWLREQKVPVLPIYTKIDKLSG--NQLSRHAAILD------AGHGIKKDERILFSSKTGQ 179
Query: 290 GRDEIL 295
GRDE++
Sbjct: 180 GRDELI 185
>gi|403515255|ref|YP_006656075.1| GTP-binding protein YsxC [Lactobacillus helveticus R0052]
gi|403080693|gb|AFR22271.1| GTP-binding protein YsxC [Lactobacillus helveticus R0052]
Length = 196
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 91/147 (61%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ + + S+VR + P D LPE AL GRSNVGKSSL+N+++ RK LA TS PGKTQ +
Sbjct: 3 IKSSNYAVSAVREDQYPKDNLPEIALSGRSNVGKSSLINTILNRKNLARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + IND +YLVD+PGYGYA ++ R ++ + +DY R L + +LID+
Sbjct: 63 NFYLINDEFYLVDVPGYGYARVSQKKRQEFGEMIQDYLETRPNLKGLVILIDSRHEPTKD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKK 251
D+ ++ +P+ +V TK DK KK
Sbjct: 123 DIAMYNYAQYLNLPILVVCTKIDKIKK 149
>gi|377809582|ref|YP_005004803.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus
claussenii ATCC BAA-344]
gi|361056323|gb|AEV95127.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus
claussenii ATCC BAA-344]
Length = 196
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 103/194 (53%), Gaps = 12/194 (6%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V E S+V E P+ G PE A+VGRSNVGKSSL N+L+ RK A TS PGKTQ
Sbjct: 2 EVHNVELQISAVAPEQYPTQGYPEIAMVGRSNVGKSSLTNTLINRKSYARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +R+ + + VD+PGYGYA ++ R W + Y +R+ L V LIDA
Sbjct: 62 LNFYRVEEKVFFVDVPGYGYAKVSQKEREKWGTMIETYLTSRNQLKGVISLIDARHQPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQ---GFFQTAPPW 280
D+ +L IP+ +V TK D K P N + LI+ GF + +
Sbjct: 122 DDVSMYQYLNYYNIPILVVATKSD---------KIPRGKWNKQESLIKKTIGFDKKNSAF 172
Query: 281 IMTSSVTNQGRDEI 294
M S+ T +G+D++
Sbjct: 173 QMFSAQTKEGKDQV 186
>gi|389819477|ref|ZP_10209345.1| GTP-binding protein [Planococcus antarcticus DSM 14505]
gi|388463275|gb|EIM05639.1| GTP-binding protein [Planococcus antarcticus DSM 14505]
Length = 194
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 103/192 (53%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V E V S+VR + P DGLPEFAL GRSNVGKSS +N ++ RK +A S PGKTQ
Sbjct: 2 KVNNVELVISAVRPDQYPEDGLPEFALAGRSNVGKSSFINKMIGRKSMARISSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N ++I + + VD+PGYGYA + R W K + Y +R L +V ++D P
Sbjct: 62 LNFYKIEEKLFYVDVPGYGYAKVSKSEREAWGKMIERYITDREPLRAVIQIVDLRHPPSK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQT--APPWI 281
D+ ++ +IP ++ TK D K P+ + +++++ P I
Sbjct: 122 DDIAMYEFMKHFEIPCIIIATKAD---------KIPKGKWDKHKKIVRTTLDMDKTDPLI 172
Query: 282 MTSSVTNQGRDE 293
+ S+ T G+DE
Sbjct: 173 VFSAETGLGKDE 184
>gi|52081302|ref|YP_080093.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|319647215|ref|ZP_08001437.1| GTPase EngB [Bacillus sp. BT1B_CT2]
gi|404490181|ref|YP_006714287.1| GTP-binding protein YsxC [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423683281|ref|ZP_17658120.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
licheniformis WX-02]
gi|81825232|sp|Q65GJ7.1|ENGB_BACLD RecName: Full=Probable GTP-binding protein EngB
gi|52004513|gb|AAU24455.1| GTP-binding domain,Small GTP-binding protein domain [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|52349183|gb|AAU41817.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|317390562|gb|EFV71367.1| GTPase EngB [Bacillus sp. BT1B_CT2]
gi|383440055|gb|EID47830.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
licheniformis WX-02]
Length = 195
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 108/200 (54%), Gaps = 11/200 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V ++E V S+V+ E P GLPE AL GRSNVGKSS +N+++ RK LA TS PGKTQ
Sbjct: 2 KVTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINTMINRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IND + VD+PGYG+A + R W + + Y +R L +V ++D
Sbjct: 62 LNFYIINDVLHFVDVPGYGFAKVSKTEREAWGRMIETYLTSREELKAVVQIVDLRHAPSQ 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+ +L +IP+ ++ TK DK + K + K +E LN + I
Sbjct: 122 DDVMMYDFLKHYEIPVIVIATKADKIPKGKWEKHAKVVKETLN---------IEKEDRLI 172
Query: 282 MTSSVTNQGRDEILLHMAQL 301
+ SS T +G+ E + Q+
Sbjct: 173 LFSSETKKGKQEAWSAIEQM 192
>gi|339481433|ref|ZP_08657092.1| GTP-binding protein YsxC [Leuconostoc pseudomesenteroides KCTC
3652]
Length = 162
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 84/149 (56%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V E V S+V P+DG PE ALVGRSNVGKSSL N+L++RK A TS PGKTQ +
Sbjct: 3 VHNVEMVMSAVSASQYPTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + + D Y VD+PGYGYA + R + ++Y +R L V L+DA
Sbjct: 63 NFYDVEDKLYFVDVPGYGYAKVSKAQREAFGVMIEEYITSRKQLRGVISLVDARHEPSED 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D+ WL IP+ +V TK DK + K
Sbjct: 123 DISMYEWLHYYNIPILVVATKSDKISRGK 151
>gi|403668370|ref|ZP_10933645.1| GTP-binding protein [Kurthia sp. JC8E]
Length = 205
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 101/192 (52%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V + + S+V+ E P +G PEFAL GRSNVGKSS +N ++ RK LA S PGKTQ
Sbjct: 2 KVHNVDMIMSAVKPEQYPEEGYPEFALAGRSNVGKSSFINRMIGRKALARISAKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N ++I + + VD+PGYGYA ++ R W K + Y + R L +V +ID
Sbjct: 62 LNFYKIEEQLFFVDVPGYGYAKVSKKEREAWGKMIETYLVARRQLKAVIQIIDLRHEPSD 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP--PWI 281
D +L IP L+ TK DK KK K + ++I+ P P I
Sbjct: 122 EDCMMYDFLKHYNIPTILIATKADKVKKGK---------WDHHLKIIRNVLDKDPNDPII 172
Query: 282 MTSSVTNQGRDE 293
+ SS T +G DE
Sbjct: 173 LFSSETGKGFDE 184
>gi|325295391|ref|YP_004281905.1| GTP-binding protein engB [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065839|gb|ADY73846.1| GTP-binding protein engB [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 194
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 107/200 (53%), Gaps = 12/200 (6%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ + + K+ E+ P E A VGRSNVGKSSLLN+LV K+A S PGKT+
Sbjct: 2 KIKKVKLYKTVYAPEELPQTPYKEVAFVGRSNVGKSSLLNTLVNNYKIAKVSSEPGKTRS 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IND +++VDLPGYG+A P + + W + Y R TL VFLL+D+ +
Sbjct: 62 VNFYLINDKFFMVDLPGYGFAKVPFKEQKRWRDLIEKYLKERDTLKGVFLLVDSKVGPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRK--KKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D + WL IP +V TK DK K +K+ ++ EE L D I F
Sbjct: 122 KDKQMKDWLDFFGIPYVVVATKVDKLKSSEKQKLKRKVEEGLKDKNLEIIPF-------- 173
Query: 282 MTSSVTNQGRDEILLHMAQL 301
SS T +GR E+L + +L
Sbjct: 174 --SSKTREGRVEVLKRIERL 191
>gi|262198758|ref|YP_003269967.1| ribosome biogenesis GTP-binding protein YsxC [Haliangium ochraceum
DSM 14365]
gi|262082105|gb|ACY18074.1| ribosome biogenesis GTP-binding protein YsxC [Haliangium ochraceum
DSM 14365]
Length = 198
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 110/197 (55%), Gaps = 13/197 (6%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
AEFV S+ + P+ LPE A GRSNVGKSSL+N+LV LA TS+TPG+T+ +N F
Sbjct: 6 AEFVTSAAKPSQFPAPTLPEIAFAGRSNVGKSSLINTLVDIAGLARTSRTPGRTRLVNWF 65
Query: 168 RI----NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+I VDLPGYGYA P +R W +DY +R+TL ++ +LIDA A+
Sbjct: 66 QIVPAKGKPMLFVDLPGYGYAKVPTAMRASWRPLIEDYLSDRATLRALVVLIDARRGAQE 125
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
+++ WL ++P V TK DK K K ++P E+ + PP I+
Sbjct: 126 EEIDLLDWLRSAEVPAITVVTKADKLSKNK---RKPAA-----AEIQRDLGLRRPP-ILF 176
Query: 284 SSVTNQGRDEILLHMAQ 300
SS++ G +++ +A+
Sbjct: 177 SSLSGDGLNDLWQAIAR 193
>gi|258405422|ref|YP_003198164.1| ribosome biogenesis GTP-binding protein YsxC [Desulfohalobium
retbaense DSM 5692]
gi|257797649|gb|ACV68586.1| ribosome biogenesis GTP-binding protein YsxC [Desulfohalobium
retbaense DSM 5692]
Length = 205
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 102/187 (54%), Gaps = 10/187 (5%)
Query: 109 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFR 168
E ++ E PS +P+ AL GRSNVGKSSL+N+L RKKLA S TPGKT+ +N +R
Sbjct: 5 ELETTAYTAEQFPSLDVPQVALAGRSNVGKSSLINALAGRKKLAKISSTPGKTRSLNFYR 64
Query: 169 I-NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
D +YLVDLPGYGYA + R W YF + L +V +L+D+ +P + +DLE
Sbjct: 65 AAGDGFYLVDLPGYGYAKRSKTERGQWAALMDVYFQKSTGLQAVVVLLDSRLPPQKLDLE 124
Query: 228 YASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVT 287
S+L + IP+ TK DK K K + + Q + + P I+ S+ T
Sbjct: 125 LISFLQRESIPLIAALTKADKCKNK---------DRSRVQRQWKELLSPSAPLILFSAKT 175
Query: 288 NQGRDEI 294
G+ +
Sbjct: 176 GMGKQTL 182
>gi|84685376|ref|ZP_01013274.1| GTP-binding protein [Maritimibacter alkaliphilus HTCC2654]
gi|84666533|gb|EAQ13005.1| GTP-binding protein [Rhodobacterales bacterium HTCC2654]
Length = 218
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 94/186 (50%), Gaps = 5/186 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
AQ +F+K V P D E GRSNVGKSSL+N+L RK LA S TPG+TQ I
Sbjct: 26 AAQTDFLKGVVAMNGLPPDDRIEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRTQEI 85
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F D YLVDLPGYG+A AP + W K K Y R++L F+LID K +
Sbjct: 86 NFFTTTDGPYLVDLPGYGFANAPVAVVEKWQKLLKSYLSGRASLRRAFVLIDTRHGIKAV 145
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E + L ++ + V TK DK K ++ L +E + P +MTS
Sbjct: 146 DEEIMTLLDKSAVTFQAVLTKADKVKAADR-----DKILKQVREKLSKHPAAYPELVMTS 200
Query: 285 SVTNQG 290
S G
Sbjct: 201 SEKGDG 206
>gi|16079871|ref|NP_390697.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis
subsp. subtilis str. 168]
gi|221310759|ref|ZP_03592606.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. 168]
gi|221315084|ref|ZP_03596889.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. NCIB 3610]
gi|221320003|ref|ZP_03601297.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. JH642]
gi|221324285|ref|ZP_03605579.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. SMY]
gi|321312351|ref|YP_004204638.1| GTP-binding protein YsxC [Bacillus subtilis BSn5]
gi|384176403|ref|YP_005557788.1| GTP-binding protein [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|402776976|ref|YP_006630920.1| ribosome 50S subunit assembly GTPase [Bacillus subtilis QB928]
gi|418031998|ref|ZP_12670481.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. SC-8]
gi|428280277|ref|YP_005562012.1| GTPase EngB [Bacillus subtilis subsp. natto BEST195]
gi|430755953|ref|YP_007208676.1| GTP-binding protein EngB [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|443632146|ref|ZP_21116326.1| GTPase EngB [Bacillus subtilis subsp. inaquosorum KCTC 13429]
gi|449095262|ref|YP_007427753.1| ribosome biogenesis GTP-binding protein [Bacillus subtilis XF-1]
gi|452915110|ref|ZP_21963736.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis
MB73/2]
gi|586754|sp|P38424.1|ENGB_BACSU RecName: Full=Probable GTP-binding protein EngB
gi|49259156|pdb|1SUL|A Chain A, Crystal Structure Of The Apo-Ysxc
gi|49259157|pdb|1SUL|B Chain B, Crystal Structure Of The Apo-Ysxc
gi|49259162|pdb|1SVI|A Chain A, Crystal Structure Of The Gtp-Binding Protein Ysxc
Complexed With Gdp
gi|49259165|pdb|1SVW|A Chain A, Crystal Structure Of Ysxc Complexed With Gmppnp
gi|49259166|pdb|1SVW|B Chain B, Crystal Structure Of Ysxc Complexed With Gmppnp
gi|496558|emb|CAA53985.1| unnamed protein product [Bacillus subtilis subsp. subtilis str.
168]
gi|1770079|emb|CAA99541.1| hypothetical protein [Bacillus subtilis]
gi|2635284|emb|CAB14779.1| GTPase involved in ribosome 50S subunit assembly [Bacillus subtilis
subsp. subtilis str. 168]
gi|291485234|dbj|BAI86309.1| GTPase EngB [Bacillus subtilis subsp. natto BEST195]
gi|320018625|gb|ADV93611.1| GTP-binding protein YsxC [Bacillus subtilis BSn5]
gi|349595627|gb|AEP91814.1| GTP-binding protein [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|351470861|gb|EHA30982.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. SC-8]
gi|402482156|gb|AFQ58665.1| GTPase involved in ribosome 50S subunit assembly [Bacillus subtilis
QB928]
gi|407960015|dbj|BAM53255.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis
BEST7613]
gi|407965658|dbj|BAM58897.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis
BEST7003]
gi|430020473|gb|AGA21079.1| GTP-binding protein EngB [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|443348261|gb|ELS62318.1| GTPase EngB [Bacillus subtilis subsp. inaquosorum KCTC 13429]
gi|449029177|gb|AGE64416.1| ribosome biogenesis GTP-binding protein [Bacillus subtilis XF-1]
gi|452115458|gb|EME05854.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis
MB73/2]
Length = 195
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 108/202 (53%), Gaps = 11/202 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V ++E V S+V+ E P GLPE AL GRSNVGKSS +NSL+ RK LA TS PGKTQ
Sbjct: 2 KVTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IND + VD+PGYG+A + R W + + Y R L +V ++D
Sbjct: 62 LNFYIINDELHFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSN 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP--PWI 281
D++ +L IP+ ++ TK D K P+ + ++++ P I
Sbjct: 122 DDVQMYEFLKYYGIPVIVIATKAD---------KIPKGKWDKHAKVVRQTLNIDPEDELI 172
Query: 282 MTSSVTNQGRDEILLHMAQLRN 303
+ SS T +G+DE + ++ N
Sbjct: 173 LFSSETKKGKDEAWGAIKKMIN 194
>gi|402773365|ref|YP_006592902.1| ribosome biogenesis GTP-binding protein YsxC [Methylocystis sp.
SC2]
gi|401775385|emb|CCJ08251.1| Ribosome biogenesis GTP-binding protein YsxC [Methylocystis sp.
SC2]
Length = 220
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 88/147 (59%), Gaps = 5/147 (3%)
Query: 109 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFR 168
+F+ +S + D P G PE A GRSNVGKSSLLN+L +RK LA S TPG+TQ +N F
Sbjct: 22 DFIFASAKASDLPVIGPPEIAFAGRSNVGKSSLLNALTKRKTLARVSNTPGRTQQLNFFA 81
Query: 169 IN-----DSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+ + LVD+PGYGYAA +E +W + +DY R++L VF+L+D KP
Sbjct: 82 LGGGPDAERLRLVDMPGYGYAAVGKEKVANWSQLMRDYLRGRASLARVFVLVDGRRGVKP 141
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRK 250
+D E L Q+ + ++ TK D+ K
Sbjct: 142 LDEEMFDLLDQSAVSYQVILTKHDELK 168
>gi|418293620|ref|ZP_12905528.1| GTP-binding protein YsxC [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379065011|gb|EHY77754.1| GTP-binding protein YsxC [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 223
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA F+ S+ + + CP+D E A GRSN GKSS LN+L LA TSKTPG+TQ +N
Sbjct: 24 QASFMISAAKVDQCPADEGLEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNF 82
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
FR++D LVDLPGYGYA P L+ W + + Y +R +L VFL++D P D
Sbjct: 83 FRLDDERRLVDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLAGVFLMMDIRHPLTEFDR 142
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
W +Q+P+ ++ TK DK
Sbjct: 143 MMLDWSNASQMPLHILLTKSDK 164
>gi|392419280|ref|YP_006455884.1| GTP-binding protein YsxC [Pseudomonas stutzeri CCUG 29243]
gi|390981468|gb|AFM31461.1| GTP-binding protein YsxC [Pseudomonas stutzeri CCUG 29243]
Length = 217
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA F+ S+ + + CP+D E A GRSN GKSS LN+L LA TSKTPG+TQ +N
Sbjct: 13 QATFMISAAKVDQCPADEGLEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNF 71
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
FR++D LVDLPGYGYA P L+ W + + Y +R +L VFL++D P D
Sbjct: 72 FRLDDERRLVDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLAGVFLMMDIRHPLTEFDR 131
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
W +Q+P+ ++ TK DK
Sbjct: 132 MMLDWASASQMPLHILLTKSDK 153
>gi|310657904|ref|YP_003935625.1| GTP-binding protein [[Clostridium] sticklandii]
gi|308824682|emb|CBH20720.1| GTP-binding protein [[Clostridium] sticklandii]
Length = 202
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 84/140 (60%)
Query: 109 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFR 168
E V S++ P D LPE A VGRSNVGKSS +N+L+ R+ LA S+ PGKT+ IN ++
Sbjct: 7 ELVISAMSKTQYPHDELPEVAFVGRSNVGKSSAINTLLNRRSLARVSQNPGKTRTINFYK 66
Query: 169 INDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEY 228
IN+ +Y VDLPGYGYA + R W ++YF N L +FLL+D K D+
Sbjct: 67 INEEFYFVDLPGYGYAKTAKTERQHWGTVMQEYFENSQDLRHIFLLLDIRHEPKEDDILM 126
Query: 229 ASWLGQNQIPMTLVFTKCDK 248
+ IP+T++ TK DK
Sbjct: 127 YKYAVHYNIPVTIIATKSDK 146
>gi|397688707|ref|YP_006526026.1| GTP-binding protein YsxC [Pseudomonas stutzeri DSM 10701]
gi|395810263|gb|AFN79668.1| GTP-binding protein YsxC [Pseudomonas stutzeri DSM 10701]
Length = 240
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA F+ S+ + + CP+D E A GRSN GKSS LN+L LA TSKTPG+TQ +N
Sbjct: 41 QATFMISAAKVDQCPADEGLEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNF 99
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
FR++D LVDLPGYGYA P L+ W + + Y +R +L VFL++D P D
Sbjct: 100 FRLDDEHRLVDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLAGVFLMMDIRHPLTEFDR 159
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
W +Q+P+ ++ TK DK
Sbjct: 160 MMLDWSSASQMPLHILLTKSDK 181
>gi|226942364|ref|YP_002797437.1| ribosome biogenesis GTP-binding protein YsxC [Azotobacter
vinelandii DJ]
gi|259645889|sp|C1DH55.1|ENGB_AZOVD RecName: Full=Probable GTP-binding protein EngB
gi|226717291|gb|ACO76462.1| GTPase, MMR_HSR1 family [Azotobacter vinelandii DJ]
Length = 216
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 83/142 (58%), Gaps = 1/142 (0%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA F+ S+ R + CP+D E A GRSN GKSS LN+L LA TSKTPG+TQ +N
Sbjct: 13 QAAFMLSAARVDQCPADDGLEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNF 71
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
FR++D LVDLPGYGYA P L+ W + Y +R +L V LL+D P D
Sbjct: 72 FRLDDRRRLVDLPGYGYAKVPIPLKQHWQHHLEAYLGSRRSLAGVVLLMDIRHPLTDFDR 131
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
W G + +PM ++ TK DK
Sbjct: 132 MMLDWAGASGMPMHILLTKADK 153
>gi|317051090|ref|YP_004112206.1| ribosome biogenesis GTP-binding protein YsxC [Desulfurispirillum
indicum S5]
gi|316946174|gb|ADU65650.1| ribosome biogenesis GTP-binding protein YsxC [Desulfurispirillum
indicum S5]
Length = 204
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 90/147 (61%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q +F+ S+ CP PE +GRSNVGKSSL+N++ R+ +A+TSKTPG+T+ IN+
Sbjct: 9 QVQFITSAPSLAKCPVPDRPEIVFLGRSNVGKSSLINAVTGRRNIAITSKTPGRTRLINY 68
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F +N Y VDLPGYG+A P +R +W++ +Y R + +++DA A+ DL
Sbjct: 69 FDVNGDLYCVDLPGYGFARVPTGMRDEWNRSLYEYLERRENIALAIMIVDARHEAQKNDL 128
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKK 253
S L + ++P+ +V TK DK K +
Sbjct: 129 RMFSLLQELEVPVFIVATKADKLTKNQ 155
>gi|330996286|ref|ZP_08320171.1| ribosome biogenesis GTP-binding protein YsxC [Paraprevotella
xylaniphila YIT 11841]
gi|329573478|gb|EGG55085.1| ribosome biogenesis GTP-binding protein YsxC [Paraprevotella
xylaniphila YIT 11841]
Length = 157
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 94/157 (59%), Gaps = 5/157 (3%)
Query: 145 LVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLN 204
L KKLA TS TPGKT INHF IN WYLVDLPGYGYA ++ + + Y L
Sbjct: 2 LANNKKLAKTSSTPGKTLLINHFLINKEWYLVDLPGYGYAKISKKEQEKLQQIISSYILR 61
Query: 205 RSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLN 264
R + ++F+L+D+ + ID+E+ WLG+N IP ++VFTK DK K K + N++
Sbjct: 62 REQMTNLFVLVDSRHEPQKIDMEFIEWLGENGIPFSIVFTKADKSKPTK-----LKANID 116
Query: 265 DFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQL 301
+ + ++ ++ PP+ +TSS GR E+L ++ +
Sbjct: 117 IYLKTLKEQWEELPPYFITSSENKTGRTELLNYIESI 153
>gi|94501575|ref|ZP_01308092.1| GTP-binding protein [Bermanella marisrubri]
gi|94426258|gb|EAT11249.1| GTP-binding protein [Oceanobacter sp. RED65]
Length = 200
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 84/145 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+A+F+ S+ CP D E A GRSN GKSS LN+L ++ KLA TSKTPG+TQ IN
Sbjct: 7 KAQFLISAPSIRQCPEDNGAEVAFAGRSNAGKSSALNTLAQQNKLARTSKTPGRTQLINF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I + LVDLPGYG+A P ++ +W K +Y R +L ++ L++D P DL
Sbjct: 67 FEIEEGLRLVDLPGYGFAKVPERMKREWQKNMSEYLEQRKSLKAMVLVMDIRHPLSEFDL 126
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKK 251
W +P ++ TK DK KK
Sbjct: 127 MMCQWALDCNMPTHILLTKADKLKK 151
>gi|421616996|ref|ZP_16057996.1| GTP-binding protein YsxC [Pseudomonas stutzeri KOS6]
gi|409781059|gb|EKN60665.1| GTP-binding protein YsxC [Pseudomonas stutzeri KOS6]
Length = 217
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA F+ S+ + + CP+D E A GRSN GKSS LN+L LA TSKTPG+TQ +N
Sbjct: 13 QATFMISAAKVDQCPADEGLEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNF 71
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
FR++D LVDLPGYGYA P L+ W + + Y +R +L VFL++D P D
Sbjct: 72 FRLDDQRRLVDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLAGVFLMMDIRHPLTEFDR 131
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
W +Q+P+ ++ TK DK
Sbjct: 132 MMLDWASASQMPLHILLTKSDK 153
>gi|311069312|ref|YP_003974235.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus atrophaeus
1942]
gi|419820031|ref|ZP_14343648.1| GTP-binding protein YsxC [Bacillus atrophaeus C89]
gi|310869829|gb|ADP33304.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus atrophaeus
1942]
gi|388475884|gb|EIM12590.1| GTP-binding protein YsxC [Bacillus atrophaeus C89]
Length = 195
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 106/202 (52%), Gaps = 11/202 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +++ V S+V+ E P GLPE AL GRSNVGKSS +NSL+ RK LA TS PGKTQ
Sbjct: 2 KVTKSDIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IND + VD+PGYG+A + R W + + Y R L +V ++D
Sbjct: 62 LNFYIINDDLHFVDVPGYGFAKVSKTEREAWGRMIETYITTREELKAVVQIVDLRHAPSA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK--NGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+ +L IP+ ++ TK DK K K K + LN + I
Sbjct: 122 DDVSMYDFLKHYGIPVIIIATKADKIPKGKWDKHAKVVRQTLN---------IEPEDELI 172
Query: 282 MTSSVTNQGRDEILLHMAQLRN 303
+ SS T +G+DE + ++ N
Sbjct: 173 LFSSETKKGKDEAWGAIKKMIN 194
>gi|254461126|ref|ZP_05074542.1| GTP-binding protein [Rhodobacterales bacterium HTCC2083]
gi|206677715|gb|EDZ42202.1| GTP-binding protein [Rhodobacteraceae bacterium HTCC2083]
Length = 217
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 97/196 (49%), Gaps = 5/196 (2%)
Query: 106 AQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCIN 165
Q EFVK V P E GRSNVGKS+L+N+L K LA S TPG+TQ IN
Sbjct: 26 GQTEFVKGVVAMSGLPDADRMEVCFAGRSNVGKSTLINALTGHKALARASNTPGRTQEIN 85
Query: 166 HFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPID 225
F +S YLVDLPGYGYA AP + W + K Y R TL F+LIDA K +D
Sbjct: 86 FFTAAESHYLVDLPGYGYANAPLPVVEKWQRLLKQYLSGRQTLRRAFVLIDARHGVKAVD 145
Query: 226 LEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSS 285
E S L + + V TK DK K E+ LN + + P ++TSS
Sbjct: 146 HEIMSLLDSSAVTFQCVLTKADKVKLVDR-----EKVLNQVRGELAKHPAAFPEMVLTSS 200
Query: 286 VTNQGRDEILLHMAQL 301
G +++ +A L
Sbjct: 201 EKGDGIEQLRAIIATL 216
>gi|118444919|ref|YP_878859.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium novyi NT]
gi|166225951|sp|A0Q2K7.1|ENGB_CLONN RecName: Full=Probable GTP-binding protein EngB
gi|118135375|gb|ABK62419.1| GTP-binding protein [Clostridium novyi NT]
Length = 200
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 103/196 (52%), Gaps = 17/196 (8%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +EF+ S+VR P D E A VGRSN GKSSL+N + R+KLA TS TPGKT+ I
Sbjct: 3 IKNSEFIISAVRPSQYPVDNRVEMAFVGRSNAGKSSLINVITNRRKLAKTSSTPGKTRQI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F IN+ +Y VDLPGYG+A + + W + Y +NR L + LL+D+
Sbjct: 63 NFFLINNEFYFVDLPGYGFAKVSKSEQQKWGSMMEQYLINRHQLKKIVLLVDSRHKPSKE 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQT-----APP 279
D++ W+ +V TK DK +K NDFQ+ + +T
Sbjct: 123 DVQMYEWIKYYGYETIIVATKSDKLRK------------NDFQKNRKIIKETLNIRDEDK 170
Query: 280 WIMTSSVTNQGRDEIL 295
++ SS+ G++E+L
Sbjct: 171 FMFFSSLNKSGKEELL 186
>gi|397689190|ref|YP_006526444.1| ribosome biogenesis GTP-binding protein YsxC [Melioribacter roseus
P3M]
gi|395810682|gb|AFN73431.1| ribosome biogenesis GTP-binding protein YsxC [Melioribacter roseus
P3M]
Length = 194
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 112/197 (56%), Gaps = 6/197 (3%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ + EFV S+ + P D LP L GRSNVGKSS +N+L K+A TS TPGKT+ I
Sbjct: 1 MKKIEFVASAFNMNEIPKDDLPCAVLCGRSNVGKSSFINALFSPLKVARTSSTPGKTRSI 60
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N++ + +YLVDLPG+GYA + + W+ +YF + + +VF LIDA +P+
Sbjct: 61 NYYLVERKFYLVDLPGFGYAKVSKSEKNYWELLITNYFDTNNNISTVFHLIDARHKPQPL 120
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
DL ++ ++P L+ +K DK K+ + G + ++ + F E+I G + S
Sbjct: 121 DLMLNEFVRSRELPYFLILSKTDKLKQSEIAGAK-KDVIEVFPEIIFG-----TNAFLFS 174
Query: 285 SVTNQGRDEILLHMAQL 301
+V + G+ EI+ ++ L
Sbjct: 175 AVKHTGKKEIIKLLSSL 191
>gi|315653482|ref|ZP_07906403.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
ATCC 55195]
gi|315489173|gb|EFU78814.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
ATCC 55195]
Length = 195
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 93/152 (61%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V ++FV S+V + P D LPEFAL GRSNVGKSSL+N+++ R+ LA TS+ PGKTQ
Sbjct: 2 KVNNSKFVISAVSDKQYPQDDLPEFALSGRSNVGKSSLINAVLNRRNLARTSQQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + +N Y VD+PGYGYA +E R + + +DY R+ L + LL+DA
Sbjct: 62 LNFYLVNTDLYFVDVPGYGYAKVSKEQRQKFGEMIQDYLETRADLKGLVLLVDARHDPTV 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNG 255
D+ ++ IP+ +V TK DK KK G
Sbjct: 122 DDINMFNYALCLNIPILVVATKIDKLKKSAIG 153
>gi|377578489|ref|ZP_09807466.1| putative GTP-binding protein EngB [Escherichia hermannii NBRC
105704]
gi|377540075|dbj|GAB52631.1| putative GTP-binding protein EngB [Escherichia hermannii NBRC
105704]
Length = 211
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 95/167 (56%), Gaps = 5/167 (2%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F++ + LVDLPGYGYA P E++ W + +Y R L + +L+D P K +D
Sbjct: 68 FQVAEGRRLVDLPGYGYAEVPEEMKLKWQRALAEYLHARQCLQGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF 273
+ W ++QIP+ ++ TK DK +G ++ + LN +E + F
Sbjct: 128 QMIHWAVESQIPVLVLLTKADKL---ASGARKAQ--LNMVREAVLAF 169
>gi|255262598|ref|ZP_05341940.1| ribosome biogenesis GTP-binding protein YsxC [Thalassiobium sp.
R2A62]
gi|255104933|gb|EET47607.1| ribosome biogenesis GTP-binding protein YsxC [Thalassiobium sp.
R2A62]
Length = 217
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 94/186 (50%), Gaps = 5/186 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +FVK V P E GRSNVGKS+L+N+L RK LA S TPG+TQ I
Sbjct: 25 AGETDFVKGVVAMSGLPDPDRIEVCFAGRSNVGKSTLINALTGRKGLARASNTPGRTQEI 84
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N+F + + YLVDLPGYG+A AP + W + K Y R TL F+LIDA KP+
Sbjct: 85 NYFTMGEHGYLVDLPGYGFANAPLTVVEKWQRLLKQYLSGRQTLRRAFVLIDARHGVKPV 144
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E S L + V TK DK K K+ E ++ + + P ++TS
Sbjct: 145 DDEIMSLLDSAAVTFQAVLTKADKVKLKER-----ERIMDQVRGALAKHPAAYPEIVLTS 199
Query: 285 SVTNQG 290
S G
Sbjct: 200 SEKGDG 205
>gi|409396717|ref|ZP_11247697.1| GTP-binding protein YsxC [Pseudomonas sp. Chol1]
gi|409118899|gb|EKM95290.1| GTP-binding protein YsxC [Pseudomonas sp. Chol1]
Length = 211
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA F+ S+ + + CP+D E A GRSN GKSS LN+L LA TSKTPG+TQ +N
Sbjct: 13 QATFMISAAKVDQCPADEGLEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNF 71
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
FR++D LVDLPGYGYA P L+ W + + Y +R +L VFL++D P D
Sbjct: 72 FRLDDERRLVDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLAGVFLMMDIRHPLTEFDR 131
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
W +Q+P+ ++ TK DK
Sbjct: 132 MMLDWSSASQMPLHILLTKSDK 153
>gi|307546852|ref|YP_003899331.1| GTPase EngB [Halomonas elongata DSM 2581]
gi|307218876|emb|CBV44146.1| GTPase EngB [Halomonas elongata DSM 2581]
Length = 206
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 93/167 (55%), Gaps = 4/167 (2%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A F+ S+ CP+D E A GRSN GKSS +N L R+K LA TSKTPG+TQ IN F
Sbjct: 9 ARFLTSAPTLAQCPADTGAEVAFAGRSNAGKSSAINVLTRQKALARTSKTPGRTQLINFF 68
Query: 168 RIND--SWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPID 225
+ D LVDLPGYGYA P ++ +W + DY R++L + LL+D P D
Sbjct: 69 TLGDDTELRLVDLPGYGYAKVPDSVKLEWQRHLADYLQRRTSLRGLVLLMDVRHPLTEFD 128
Query: 226 LEYASWLGQNQIPMTLVFTKCDKRKK--KKNGGKRPEENLNDFQELI 270
W + +P+ ++ TK DK K KN ++ L ++++L+
Sbjct: 129 QTMLGWADEQDMPVHILLTKADKLKSGAAKNALQQVRSQLREWEDLV 175
>gi|431586020|ref|ZP_19520535.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1861]
gi|431739973|ref|ZP_19528892.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2039]
gi|430593198|gb|ELB31184.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1861]
gi|430604100|gb|ELB41600.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2039]
Length = 195
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 104/199 (52%), Gaps = 11/199 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V QAE + S+V + P LPE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ
Sbjct: 2 KVHQAEIIISAVSPKQYPETQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + I ++ + VD+PGYGYA + R W K + Y R L +V L+D
Sbjct: 62 LNFYLIENALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTREQLRAVVSLVDLRHKPSQ 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWI 281
D++ +L IP+ +V TK D K P N + I+ F +I
Sbjct: 122 EDIQMYQFLKYYDIPVIVVATKAD---------KIPRGKWNKHESEIKKALDFDHNDTFI 172
Query: 282 MTSSVTNQGRDEILLHMAQ 300
+ SSVT QG++E + Q
Sbjct: 173 LFSSVTKQGKEEAWAAIEQ 191
>gi|253680894|ref|ZP_04861697.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
D str. 1873]
gi|416365424|ref|ZP_11682769.1| GTP-binding protein YsxC [Clostridium botulinum C str. Stockholm]
gi|253562743|gb|EES92189.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
D str. 1873]
gi|338194024|gb|EGO86584.1| GTP-binding protein YsxC [Clostridium botulinum C str. Stockholm]
Length = 196
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 106/197 (53%), Gaps = 11/197 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +EF+ S+V+ P+D E A VGRSN GKS+L+N++ RKKLA TS TPGKT+ I
Sbjct: 3 IKNSEFIISAVKPAQYPTDNRIEMAFVGRSNAGKSTLINTITNRKKLAKTSSTPGKTRLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F IN+ +Y VDLPGYG+A + + W + Y +NR L + LL+D+
Sbjct: 63 NFFLINNDFYFVDLPGYGFAKVSKSEQQKWGSMMETYLVNRPQLKKIVLLVDSRHKPTKD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKK--KNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D++ W+ +V TK DK KK + K E LN +E FF
Sbjct: 123 DVQMYEWIKYYGYEAIIVATKSDKLKKNDFQKNKKIIRETLNIREEDKFTFF-------- 174
Query: 283 TSSVTNQGRDEILLHMA 299
S++ G++E+L +A
Sbjct: 175 -SALNKSGKEELLELLA 190
>gi|392940445|ref|ZP_10306089.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Thermoanaerobacter siderophilus SR4]
gi|392292195|gb|EIW00639.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Thermoanaerobacter siderophilus SR4]
Length = 194
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 101/192 (52%), Gaps = 8/192 (4%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ E V+++ E P D P+ +VGRSNVGKS+L+N+++ RK LA TS PGKT+
Sbjct: 2 KIKTVELVRTAFNEEQYPKDNFPQIVIVGRSNVGKSTLINTVLNRKNLAKTSSKPGKTRG 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN + IN+ +YLVDLPGYGYA +E++ W + + L LLID
Sbjct: 62 INFYLINNGFYLVDLPGYGYAKVSKEMKKQWAHNIETFLNTSKNLRHALLLIDIRRTPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D +W ++P T+V TK DK K E +N + + + F + I+
Sbjct: 122 DDFLMVNWFRHKELPFTVVLTKADKVNK--------SEIVNTVEGICKTFNIDSERIIVF 173
Query: 284 SSVTNQGRDEIL 295
SS+ G ++L
Sbjct: 174 SSLKKMGVSQVL 185
>gi|313884146|ref|ZP_07817912.1| ribosome biogenesis GTP-binding protein YsxC [Eremococcus coleocola
ACS-139-V-Col8]
gi|312620593|gb|EFR32016.1| ribosome biogenesis GTP-binding protein YsxC [Eremococcus coleocola
ACS-139-V-Col8]
Length = 198
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 83/147 (56%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
V AE V S+V P D LPE AL GRSNVGKSS +NSL+ RK LA TS PGKTQ
Sbjct: 2 HVHDAELVISAVNPSQYPQDQLPEVALAGRSNVGKSSFINSLIARKNLARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IN ++ VD+PGYGYA ++ R W K + Y R + +FLL+D
Sbjct: 62 LNFYAINQAFRFVDVPGYGYARVSKDFRLAWSKMIEKYLSQRENMELLFLLMDMRHEPTR 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRK 250
+D E + +P +V TK DK K
Sbjct: 122 LDREMKDFAENLDLPYAIVLTKADKIK 148
>gi|229828302|ref|ZP_04454371.1| hypothetical protein GCWU000342_00360 [Shuttleworthia satelles DSM
14600]
gi|229792896|gb|EEP29010.1| hypothetical protein GCWU000342_00360 [Shuttleworthia satelles DSM
14600]
Length = 204
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 101/185 (54%), Gaps = 7/185 (3%)
Query: 117 TEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLV 176
T P + LPE A GRSNVGKSSL+N+L+ RK A TS PGKTQ IN++RIND Y V
Sbjct: 16 TSALPKNQLPEVAFAGRSNVGKSSLINALMNRKSYARTSSQPGKTQTINYYRINDQIYCV 75
Query: 177 DLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQ 236
DLPGYG+A RE + W K + Y + L +VFLL+D D + W+
Sbjct: 76 DLPGYGFARVSREEKEAWGKMIEKYLVTSEQLAAVFLLLDIRHRPNANDKQMFDWIQYMG 135
Query: 237 IPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILL 296
++ TK DK K+ + G+ L +E ++ T I S++T QGR++I
Sbjct: 136 YQAIVIATKADKIKRSQIPGQ-----LRQMKEELKADEDTII--IPFSALTKQGREDIWD 188
Query: 297 HMAQL 301
M Q+
Sbjct: 189 LMDQV 193
>gi|257898294|ref|ZP_05677947.1| GTP-binding protein [Enterococcus faecium Com15]
gi|293557137|ref|ZP_06675691.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1039]
gi|294614148|ref|ZP_06694069.1| GTP-binding protein [Enterococcus faecium E1636]
gi|425054575|ref|ZP_18458080.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
505]
gi|425058923|ref|ZP_18462280.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
504]
gi|430835747|ref|ZP_19453734.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0680]
gi|430838152|ref|ZP_19456102.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0688]
gi|430849633|ref|ZP_19467406.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1185]
gi|430858089|ref|ZP_19475718.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1552]
gi|431497646|ref|ZP_19514800.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1634]
gi|257836206|gb|EEV61280.1| GTP-binding protein [Enterococcus faecium Com15]
gi|291592998|gb|EFF24586.1| GTP-binding protein [Enterococcus faecium E1636]
gi|291600706|gb|EFF31004.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1039]
gi|403035527|gb|EJY46913.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
505]
gi|403037043|gb|EJY48369.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
504]
gi|430489109|gb|ELA65742.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0680]
gi|430492432|gb|ELA68846.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0688]
gi|430537384|gb|ELA77727.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1185]
gi|430546041|gb|ELA86007.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1552]
gi|430588581|gb|ELB26773.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1634]
Length = 195
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 104/199 (52%), Gaps = 11/199 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V QAE + S+V + P LPE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ
Sbjct: 2 KVHQAEIIISAVAPKQYPETQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + I ++ + VD+PGYGYA + R W K + Y R L +V L+D
Sbjct: 62 LNFYLIENALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTREQLRAVVSLVDLRHKPSQ 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWI 281
D++ +L IP+ +V TK D K P N + I+ F +I
Sbjct: 122 EDIQMYQFLKYYDIPVIVVATKAD---------KIPRGKWNKHESEIKKALDFDRNDTFI 172
Query: 282 MTSSVTNQGRDEILLHMAQ 300
+ SSVT QG++E + Q
Sbjct: 173 LFSSVTKQGKEEAWAAIEQ 191
>gi|366166715|ref|ZP_09466470.1| GTP-binding protein YsxC [Acetivibrio cellulolyticus CD2]
Length = 193
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 107/198 (54%), Gaps = 7/198 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+ A F K +V+ E P + +PE VGRSNVGKSSL+N+L+ RK LA + PGKT+
Sbjct: 2 NINNARFEKGAVKPEQYPDNDIPEVTFVGRSNVGKSSLINALLNRKSLARIASKPGKTRE 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN + I+D Y VDLPGYGYA +++++ W + + Y L V +L+D
Sbjct: 62 INFYNIDDVLYFVDLPGYGYAKVSKDIKSAWGESIETYLNESKKLKLVVMLVDIRHSPSE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D + WL + +P +V TK DK + K +E L+D ++ + I
Sbjct: 122 DDQMMSKWLTSSSLPFIVVATKKDKIPRSK-----VKERLSDISNTLE--LGSGNMLIPF 174
Query: 284 SSVTNQGRDEILLHMAQL 301
SS T GR+EI+ ++A L
Sbjct: 175 SSETKDGREEIMNYIASL 192
>gi|300811980|ref|ZP_07092437.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
delbrueckii subsp. bulgaricus PB2003/044-T3-4]
gi|313123480|ref|YP_004033739.1| GTP-binding protein engb [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|422845461|ref|ZP_16892171.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
delbrueckii subsp. lactis DSM 20072]
gi|300497041|gb|EFK32106.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
delbrueckii subsp. bulgaricus PB2003/044-T3-4]
gi|312280043|gb|ADQ60762.1| Probable GTP-binding protein engB [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|325684389|gb|EGD26558.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
delbrueckii subsp. lactis DSM 20072]
Length = 200
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ Q+EF S+V+ P GL E AL GRSNVGKSS +N+L++RK LA TS +PGKTQ +
Sbjct: 3 INQSEFSVSAVKASQYPEGGLDEIALAGRSNVGKSSFINTLLQRKNLARTSSSPGKTQTL 62
Query: 165 NHFRIND---SWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
N +R++ +YLVD+PGYGYA ++ R ++ + +DY R+ L + LLID
Sbjct: 63 NFYRVDSDQADFYLVDVPGYGYAKVSKKQREEFGEMIQDYLETRAYLKGLILLIDGRHEP 122
Query: 222 KPIDL---EYASWLGQNQIPMTLVFTKCDKRKK----KKNGGKRPEENLN 264
D+ +YA +L +P+ LV TK DK KK K R NLN
Sbjct: 123 TADDIAMYDYAQYL---NLPILLVATKMDKIKKNAFNKTEAAFRKHLNLN 169
>gi|302391294|ref|YP_003827114.1| ribosome biogenesis GTP-binding protein YsxC [Acetohalobium
arabaticum DSM 5501]
gi|302203371|gb|ADL12049.1| ribosome biogenesis GTP-binding protein YsxC [Acetohalobium
arabaticum DSM 5501]
Length = 194
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 85/142 (59%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+++ S+ D P LPE AL GRSNVGKSSL+N +V R + A TS PGKTQ +N
Sbjct: 5 NVKYLCSATSPADYPRHNLPEIALAGRSNVGKSSLINQMVNRNRFAHTSSKPGKTQTLNF 64
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
+ I++ + VDLPGYG+A P E++ W + ++Y +RS L V L++DA DL
Sbjct: 65 YNIDNIFSFVDLPGYGFARVPDEVKDKWSEMIEEYLFHRSNLAGVILIVDARHEPTDDDL 124
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
WL + Q+P +V TK DK
Sbjct: 125 MMYEWLLEMQLPHLVVGTKVDK 146
>gi|419953065|ref|ZP_14469211.1| GTP-binding protein YsxC [Pseudomonas stutzeri TS44]
gi|387970341|gb|EIK54620.1| GTP-binding protein YsxC [Pseudomonas stutzeri TS44]
Length = 211
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA F+ S+ + + CP+D E A GRSN GKSS LN+L LA TSKTPG+TQ +N
Sbjct: 13 QATFMISAAKVDQCPADEGWEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNF 71
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
FR++D LVDLPGYGYA P L+ W + + Y +R +L VFL++D P D
Sbjct: 72 FRLDDERRLVDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLAGVFLMMDIRHPLTEFDC 131
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
W +Q+P+ ++ TK DK
Sbjct: 132 MMLDWSSASQMPLHILLTKSDK 153
>gi|146284373|ref|YP_001174526.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas stutzeri
A1501]
gi|145572578|gb|ABP81684.1| GTP-binding protein EngB [Pseudomonas stutzeri A1501]
Length = 227
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA F+ S+ + + CP+D E A GRSN GKSS LN+L LA TSKTPG+TQ +N
Sbjct: 24 QASFMISAAKVDQCPADEGLEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNF 82
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
FR++D LVDLPGYGYA P L+ W + + Y +R +LV VFL++D P D
Sbjct: 83 FRLDDERRLVDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLVGVFLMMDIRHPLTEFDR 142
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
W + +P+ ++ TK DK
Sbjct: 143 MMLDWANASDMPLHILLTKSDK 164
>gi|269123059|ref|YP_003305636.1| GTP-binding protein HSR1-like protein [Streptobacillus moniliformis
DSM 12112]
gi|268314385|gb|ACZ00759.1| GTP-binding protein HSR1-related protein [Streptobacillus
moniliformis DSM 12112]
Length = 191
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 103/199 (51%), Gaps = 10/199 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSD-GLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQ 162
++ AE+ KS ++ D P E A VGRSNVGKSSL+N++V+R LA TSKTPG+TQ
Sbjct: 2 EIKSAEYSKSCIKLSDYPEKMNNTEIAFVGRSNVGKSSLINTIVKRNNLARTSKTPGRTQ 61
Query: 163 CINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAK 222
+N F +N Y VDLPGYG+A P ++ +W +Y LN VF+L+D
Sbjct: 62 LVNFFLVNKDRYFVDLPGYGFAKVPANIKKNWGNIISEY-LNSERKKVVFVLLDIRRVPS 120
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D+E +L I ++FTKCDK E +E+ + +
Sbjct: 121 GEDIEMLEYLEHYNIEYYIIFTKCDKLSN--------NEKFRQLKEIKKKLEFSNEDVFF 172
Query: 283 TSSVTNQGRDEILLHMAQL 301
SS+ N G EIL + +L
Sbjct: 173 HSSLKNIGTAEILDFIDKL 191
>gi|227551677|ref|ZP_03981726.1| GTPase [Enterococcus faecium TX1330]
gi|257895723|ref|ZP_05675376.1| GTP-binding protein [Enterococcus faecium Com12]
gi|293377668|ref|ZP_06623857.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
PC4.1]
gi|293571861|ref|ZP_06682877.1| GTP-binding protein [Enterococcus faecium E980]
gi|424762816|ref|ZP_18190300.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX1337RF]
gi|431106134|ref|ZP_19497291.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1613]
gi|431737543|ref|ZP_19526496.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1972]
gi|431752043|ref|ZP_19540729.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2620]
gi|431756857|ref|ZP_19545489.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E3083]
gi|431762084|ref|ZP_19550646.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E3548]
gi|227179240|gb|EEI60212.1| GTPase [Enterococcus faecium TX1330]
gi|257832288|gb|EEV58709.1| GTP-binding protein [Enterococcus faecium Com12]
gi|291608115|gb|EFF37421.1| GTP-binding protein [Enterococcus faecium E980]
gi|292643668|gb|EFF61789.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
PC4.1]
gi|402423921|gb|EJV56120.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX1337RF]
gi|430569666|gb|ELB08656.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1613]
gi|430598630|gb|ELB36365.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1972]
gi|430614652|gb|ELB51632.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2620]
gi|430620711|gb|ELB57513.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E3083]
gi|430624776|gb|ELB61426.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E3548]
Length = 195
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 102/192 (53%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V QAE + S+V + P LPE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ
Sbjct: 2 KVHQAEIIISAVAPKQYPETQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + I ++ + VD+PGYGYA + R W K + Y R L +V L+D
Sbjct: 62 LNFYLIENALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTREQLRAVVSLVDLRHKPSQ 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWI 281
D++ +L IP+ +V TK D K P N + I+ F +I
Sbjct: 122 EDIQMYQFLKYYDIPVIVVATKAD---------KIPRGKWNKHESEIKKALDFDHNDTFI 172
Query: 282 MTSSVTNQGRDE 293
+ SSVT QG++E
Sbjct: 173 LFSSVTKQGKEE 184
>gi|332637217|ref|ZP_08416080.1| GTP-binding protein YsxC [Weissella cibaria KACC 11862]
Length = 209
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 92/153 (60%), Gaps = 4/153 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V E V S+VR P+DGLPE A VGRSNVGKSSL N L+ RK A TS PGKTQ
Sbjct: 2 EVHNVEMVMSAVRASQYPTDGLPEVAFVGRSNVGKSSLTNVLINRKSFARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDAS-IPAK 222
+N +++ D + VD+PGYGYA ++ R ++ +Y R L + L+DA +P+K
Sbjct: 62 LNFYKVEDQIFFVDVPGYGYAKVSKKAREEFAVMIGEYLRTREPLKGIVQLVDARHMPSK 121
Query: 223 PIDLEYASWLGQNQI--PMTLVFTKCDKRKKKK 253
D+E +WL + I P+ +V TK DK + K
Sbjct: 122 E-DIEMYNWLTSDDIGLPVLVVATKADKISRGK 153
>gi|326391011|ref|ZP_08212560.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
ethanolicus JW 200]
gi|325992956|gb|EGD51399.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
ethanolicus JW 200]
Length = 194
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 101/192 (52%), Gaps = 8/192 (4%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ E V+++ E P D P+ +VGRSNVGKS+L+N+++ RK LA TS PGKT+
Sbjct: 2 KIKTVELVRTAFNEEQYPKDNFPQIVIVGRSNVGKSTLINTVLNRKNLAKTSSKPGKTRG 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN + IN+ +YLVDLPGYGYA +E++ W + + L LLID
Sbjct: 62 INFYLINNGFYLVDLPGYGYAKVSKEMKKQWAHNIETFLNTSKNLRHALLLIDIRRTPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D +W ++P T+V TK DK K E +N + + + F + I+
Sbjct: 122 DDFLMVNWFRHKELPFTVVLTKADKVNK--------SEIVNAVEGICKTFNIDSERIIVF 173
Query: 284 SSVTNQGRDEIL 295
SS+ G ++L
Sbjct: 174 SSLKKMGVSQVL 185
>gi|429244626|ref|ZP_19208065.1| GTP-binding protein YsxC [Clostridium botulinum CFSAN001628]
gi|428758344|gb|EKX80777.1| GTP-binding protein YsxC [Clostridium botulinum CFSAN001628]
Length = 180
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 101/177 (57%), Gaps = 11/177 (6%)
Query: 121 PSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPG 180
P DG PE A VGRSNVGKS+L+N+L R+KL S TPGKT+ IN F IND+ Y VDLPG
Sbjct: 7 PEDGRPEVAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKTRLINFFVINDNMYFVDLPG 66
Query: 181 YGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMT 240
YGYA ++ + +W + Y + R L + LL+D+ D+ +W+ +
Sbjct: 67 YGYAKVSKKEKENWGYIMEQYLVERDQLKKIVLLVDSRHKPTSDDINMYNWIKHYNYEVL 126
Query: 241 LVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP--PWIMTSSVTNQGRDEIL 295
+V TK DK K+ ++N +++I+ + ++ SS++ +G++E+L
Sbjct: 127 VVGTKLDKLKR---------NDINKNKKIIRDTLKMDKDDKILLISSLSKEGKEEVL 174
>gi|386022783|ref|YP_005940808.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas stutzeri
DSM 4166]
gi|327482756|gb|AEA86066.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas stutzeri
DSM 4166]
Length = 216
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA F+ S+ + + CP+D E A GRSN GKSS LN+L LA TSKTPG+TQ +N
Sbjct: 13 QASFMISAAKVDQCPADEGLEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNF 71
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
FR++D LVDLPGYGYA P L+ W + + Y +R +LV VFL++D P D
Sbjct: 72 FRLDDERRLVDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLVGVFLMMDIRHPLTEFDR 131
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
W + +P+ ++ TK DK
Sbjct: 132 MMLDWANASDMPLHILLTKSDK 153
>gi|290477053|ref|YP_003469965.1| GTPase with nucleoside triP hydrolase domain, involved in
coordination of cell cycle [Xenorhabdus bovienii
SS-2004]
gi|289176398|emb|CBJ83205.1| putative GTPase with nucleoside triP hydrolase domain, involved in
coordination of cell cycle [Xenorhabdus bovienii
SS-2004]
Length = 207
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 81/139 (58%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
FV S+ P D E A GRSN GKSS LN+L ++K LA TSKTPG+TQ IN F +
Sbjct: 13 FVTSAPDIRHLPQDVGIEVAFAGRSNAGKSSALNALTKQKSLARTSKTPGRTQLINLFEV 72
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
D LVDLPGYGYA P E++ W +Y R L+ + +L+D P K +D++
Sbjct: 73 EDGIRLVDLPGYGYAEVPEEMKRKWQNALGEYLQKRECLLGLVVLMDIRHPLKDLDMQMI 132
Query: 230 SWLGQNQIPMTLVFTKCDK 248
W Q+P+ ++ TK DK
Sbjct: 133 EWAVVMQVPVMVLLTKADK 151
>gi|31747868|gb|AAN10193.1| probable GTP-binding protein [Candidatus Fritschea bemisiae]
Length = 197
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 99/163 (60%), Gaps = 5/163 (3%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A F+ S+++ E+ P LPE A+VGRSNVGKSSL+N L+ K LA S TPGKTQ IN+F
Sbjct: 9 ASFLTSALKGEELPRLNLPEIAIVGRSNVGKSSLINHLLNAKGLAKVSSTPGKTQRINYF 68
Query: 168 RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
++++ LVDLPGYGYAAA ++++ +W + Y NR L + L+D+ D +
Sbjct: 69 IVDEALLLVDLPGYGYAAASKQIQKNWGLWIDTYLKNRE-LKGLLFLLDSRRELTREDAQ 127
Query: 228 YASWLGQNQIPMTLVFTKCDKRKKKKNGGK----RPEENLNDF 266
+ W + + LV TK DK +K+ G + E+ L++F
Sbjct: 128 FLRWASYENLSLLLVLTKADKLSQKEKHGALKRIQEEKTLSEF 170
>gi|313893181|ref|ZP_07826758.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp. oral
taxon 158 str. F0412]
gi|313442534|gb|EFR60949.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp. oral
taxon 158 str. F0412]
Length = 222
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 107/207 (51%), Gaps = 21/207 (10%)
Query: 98 KYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKT 157
K + ++ A++ S V+ + P E A +GRSNVGKSSL+NSL + LAL S
Sbjct: 10 KEPKGPRIIAAKYNTSCVKADQYPEGDTVEIAFLGRSNVGKSSLINSLCNYRGLALVSGQ 69
Query: 158 PGKTQCINHFRIND------------SWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNR 205
PGKT+ IN+F I +W+LVDLPGYG+A + R W F DY L+
Sbjct: 70 PGKTKTINYFDIESKEDISETEERRYNWFLVDLPGYGFAKTNKGNRNLWSSFIADYILHS 129
Query: 206 STLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLND 265
L+ + LLID P PID WL + +P+ +V TK DK K+ NL
Sbjct: 130 ERLMLLCLLIDGRHPEMPIDKVAYDWLVEAGVPLQIVVTKADKLTAKEKSA-----NLAK 184
Query: 266 FQELIQGFFQTAPPWIMTSSVTNQGRD 292
+E+ + T P I+ SS+ + GR+
Sbjct: 185 IKEM----YPTDTPPILYSSLKHTGRE 207
>gi|291536691|emb|CBL09803.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Roseburia
intestinalis M50/1]
gi|291537975|emb|CBL11086.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Roseburia
intestinalis XB6B4]
Length = 199
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 95/178 (53%), Gaps = 7/178 (3%)
Query: 117 TEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLV 176
T P E A G+SNVGKSSL+N+L+ RK LA TS PGKTQ IN + IND+ YLV
Sbjct: 15 TSKVPDTAYAEVAFAGKSNVGKSSLINALMNRKALARTSAQPGKTQTINFYNINDAMYLV 74
Query: 177 DLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQ 236
DLPGYGYA A E++ W K ++Y L +VFLLID D W+
Sbjct: 75 DLPGYGYAKASEEVKAKWGKMIENYLHTSKQLKAVFLLIDIRHDPSANDRMMYEWMVYQG 134
Query: 237 IPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEI 294
++ TK DK K+ + ++N+ +E + Q I S+ T QGRDEI
Sbjct: 135 FAPIIIATKLDKIKR-----SQIQKNVKAIREGLN--VQPGTTIIPFSAETKQGRDEI 185
>gi|257887187|ref|ZP_05666840.1| GTP-binding protein [Enterococcus faecium 1,141,733]
gi|431033025|ref|ZP_19490871.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1590]
gi|257823241|gb|EEV50173.1| GTP-binding protein [Enterococcus faecium 1,141,733]
gi|430564126|gb|ELB03310.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1590]
Length = 195
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 102/192 (53%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V QAE + S+V + P LPE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ
Sbjct: 2 KVHQAEIIISAVAPKQYPETQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + I ++ + VD+PGYGYA + R W K + Y R L +V L+D
Sbjct: 62 LNFYLIENALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTREQLRAVVSLVDLRHKPSQ 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWI 281
D++ +L IP+ +V TK D K P N + I+ F +I
Sbjct: 122 EDIQMYQFLKYYDIPVIVVATKAD---------KIPRGKWNKHESEIKKALDFDHNDTFI 172
Query: 282 MTSSVTNQGRDE 293
+ SSVT QG++E
Sbjct: 173 LFSSVTKQGKEE 184
>gi|315924141|ref|ZP_07920367.1| ribosome biogenesis GTP-binding protein YsxC [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315622543|gb|EFV02498.1| ribosome biogenesis GTP-binding protein YsxC [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 212
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V +AE + S+V ++ P D LPE L+GRSNVGKSS +N+L+RR+ LA TS PGKTQ +
Sbjct: 3 VTKAEIIISAVSSKQYPQDHLPELVLLGRSNVGKSSFVNTLIRRRNLARTSSQPGKTQTM 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N ++IND + VD+PGYGYA ++ R W + Y R L VFLL+D+
Sbjct: 63 NFYQINDLFRFVDMPGYGYARVSKKSREKWGAMIETYLQKRENLAGVFLLVDSRHEPSED 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK----RKKK 252
D +WL + +V TK DK RK+K
Sbjct: 123 DELMFNWLTYYGLVPMVVMTKFDKLNAMRKRK 154
>gi|344941872|ref|ZP_08781160.1| GTP-binding protein engB [Methylobacter tundripaludum SV96]
gi|344263064|gb|EGW23335.1| GTP-binding protein engB [Methylobacter tundripaludum SV96]
Length = 210
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 104/199 (52%), Gaps = 14/199 (7%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA+F+ SS + P D E A GRSN GKSS +N+L R+ LA SKTPG+TQ +N
Sbjct: 7 QAKFINSSPHLSNTPPDQGLEVAFAGRSNAGKSSAINTLTRQNGLARISKTPGRTQMLNF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F IN+ VDLPGYGYA P E++ W + + Y +R +L ++ L++D P D
Sbjct: 67 FEINERQRFVDLPGYGYAKVPLEVKKKWHELMETYLTSRKSLCAIILVMDVRHPLTEFDW 126
Query: 227 EYASWLGQNQIPMTLVFTKCDKRK--KKKNGGKRPEENLND--FQELIQGFFQTAPPWIM 282
+ W ++P+ ++ TK DK KN + ++ L D F IQ F
Sbjct: 127 QMVEWCEHTRLPLHILLTKADKLNYGAAKNTLLQVQKELKDSNFPLTIQLF--------- 177
Query: 283 TSSVTNQGRDEILLHMAQL 301
SS+ G DE+ + QL
Sbjct: 178 -SSLKKTGIDEVHAALDQL 195
>gi|46445869|ref|YP_007234.1| hypothetical protein pc0235 [Candidatus Protochlamydia amoebophila
UWE25]
gi|81627683|sp|Q6MEP0.1|ENGB_PARUW RecName: Full=Probable GTP-binding protein EngB
gi|46399510|emb|CAF22959.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 206
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 104 QVAQAEFVKSSVRTEDCP------SDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKT 157
+ QA+F+K+++ +D P D LPE A+VGRSNVGKSSLLN L K L TS T
Sbjct: 3 KAVQAKFIKTAILNKDYPIIRSPSGDILPEVAVVGRSNVGKSSLLNHLFEAKHLVKTSAT 62
Query: 158 PGKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDA 217
PGKTQ +N F +ND DLPGYGYA P +R +W + Y +R +L + L+D
Sbjct: 63 PGKTQALNFFSLNDQIAFADLPGYGYAKVPPSVRKEWGPMVRSYLESRESLKLILFLLDI 122
Query: 218 SIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D+++ W+ ++ + LV TK DK +K+
Sbjct: 123 RRIPNEEDIQFLEWVLYHEKALILVLTKIDKVNQKE 158
>gi|145300976|ref|YP_001143817.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas salmonicida
subsp. salmonicida A449]
gi|418362655|ref|ZP_12963281.1| GTP-binding protein YsxC [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|166225938|sp|A4ST47.1|ENGB_AERS4 RecName: Full=Probable GTP-binding protein EngB
gi|142853748|gb|ABO92069.1| GTP binding protein [Aeromonas salmonicida subsp. salmonicida A449]
gi|356686104|gb|EHI50715.1| GTP-binding protein YsxC [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 217
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 81/142 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+ FV S+ P+DG E A GRSN GKSS LN+L + K LA TSKTPG+TQ IN
Sbjct: 10 KVHFVTSAPDIRHLPNDGGVEIAFAGRSNAGKSSALNTLTKHKNLARTSKTPGRTQLINL 69
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + LVDLPGYGYA P E++ W K +Y R +L + +L+D P K D+
Sbjct: 70 FELEPGKRLVDLPGYGYAQVPLEMKLKWQKSLAEYLQRRESLKGLVILMDIRHPLKDTDM 129
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
W ++P+ L+ TK DK
Sbjct: 130 NMLEWSSHRELPVMLLLTKADK 151
>gi|146278899|ref|YP_001169058.1| ribosome biogenesis GTP-binding protein YsxC [Rhodobacter
sphaeroides ATCC 17025]
gi|145557140|gb|ABP71753.1| GTP-binding protein, HSR1-related [Rhodobacter sphaeroides ATCC
17025]
Length = 217
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 99/193 (51%), Gaps = 5/193 (2%)
Query: 109 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFR 168
+FVK E P E GRSNVGKSSL+N+L RK LA S TPG+TQ IN+F
Sbjct: 29 DFVKGVTTMEALPPADRIEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINYFA 88
Query: 169 INDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEY 228
+ S YLVDLPGYGYA AP+ + W + K Y R TL F+LID K +D E
Sbjct: 89 LGPSRYLVDLPGYGYAEAPKPIVERWQRLLKGYLAGRQTLRRAFVLIDTRHGIKSVDEEI 148
Query: 229 ASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTN 288
+ L ++ + +V TK DK + + E L + ++ P +MTSS
Sbjct: 149 LNLLDRSAVTFQVVMTKADKVSQAER-----EAVLGQVRGALKKHPAAYPELVMTSSEKG 203
Query: 289 QGRDEILLHMAQL 301
G + + +A L
Sbjct: 204 LGIETLRTIIATL 216
>gi|69246839|ref|ZP_00604148.1| GTP-binding protein [Enterococcus faecium DO]
gi|257878468|ref|ZP_05658121.1| GTP-binding protein [Enterococcus faecium 1,230,933]
gi|257882890|ref|ZP_05662543.1| GTP-binding protein [Enterococcus faecium 1,231,502]
gi|257889332|ref|ZP_05668985.1| GTP-binding protein [Enterococcus faecium 1,231,410]
gi|257894345|ref|ZP_05673998.1| GTP-binding protein [Enterococcus faecium 1,231,408]
gi|260560057|ref|ZP_05832235.1| GTP-binding protein [Enterococcus faecium C68]
gi|261207454|ref|ZP_05922140.1| GTP-binding protein [Enterococcus faecium TC 6]
gi|289565865|ref|ZP_06446306.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
D344SRF]
gi|293559816|ref|ZP_06676334.1| GTP-binding protein [Enterococcus faecium E1162]
gi|293568081|ref|ZP_06679418.1| GTP-binding protein [Enterococcus faecium E1071]
gi|294617406|ref|ZP_06697040.1| GTP-binding protein [Enterococcus faecium E1679]
gi|294623405|ref|ZP_06702261.1| GTP-binding protein [Enterococcus faecium U0317]
gi|314939703|ref|ZP_07846927.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX0133a04]
gi|314942231|ref|ZP_07849083.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX0133C]
gi|314948864|ref|ZP_07852234.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX0082]
gi|314950806|ref|ZP_07853878.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX0133A]
gi|314993229|ref|ZP_07858608.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX0133B]
gi|314995228|ref|ZP_07860341.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX0133a01]
gi|383328982|ref|YP_005354866.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
Aus0004]
gi|389868800|ref|YP_006376223.1| GTP-binding protein [Enterococcus faecium DO]
gi|415899099|ref|ZP_11551516.1| GTP-binding protein [Enterococcus faecium E4453]
gi|416136839|ref|ZP_11598777.1| GTP-binding protein [Enterococcus faecium E4452]
gi|424786777|ref|ZP_18213557.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
V689]
gi|424802703|ref|ZP_18228177.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
S447]
gi|424825911|ref|ZP_18250862.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
R501]
gi|424852848|ref|ZP_18277233.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
R499]
gi|424869042|ref|ZP_18292765.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
R497]
gi|424938815|ref|ZP_18354579.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
R496]
gi|424953932|ref|ZP_18368860.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
R494]
gi|424958953|ref|ZP_18373568.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
R446]
gi|424959230|ref|ZP_18373830.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
P1986]
gi|424965980|ref|ZP_18379852.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
P1190]
gi|424968749|ref|ZP_18382352.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
P1140]
gi|424971518|ref|ZP_18384948.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
P1139]
gi|424973243|ref|ZP_18386532.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
P1137]
gi|424978260|ref|ZP_18391203.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
P1123]
gi|424980438|ref|ZP_18393233.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV99]
gi|424985480|ref|ZP_18397954.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV69]
gi|424986794|ref|ZP_18399198.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV38]
gi|424989817|ref|ZP_18402069.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV26]
gi|424995122|ref|ZP_18407020.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV168]
gi|424998648|ref|ZP_18410319.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV165]
gi|425000177|ref|ZP_18411755.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV161]
gi|425005955|ref|ZP_18417152.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV102]
gi|425006509|ref|ZP_18417681.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV1]
gi|425010569|ref|ZP_18421509.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E422]
gi|425015124|ref|ZP_18425765.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E417]
gi|425016878|ref|ZP_18427419.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
C621]
gi|425020516|ref|ZP_18430819.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
C497]
gi|425027858|ref|ZP_18435110.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
C1904]
gi|425030758|ref|ZP_18435919.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
515]
gi|425037123|ref|ZP_18441809.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
514]
gi|425037974|ref|ZP_18442608.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
513]
gi|425043366|ref|ZP_18447607.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
511]
gi|425046467|ref|ZP_18450481.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
510]
gi|425048862|ref|ZP_18452744.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
509]
gi|425051886|ref|ZP_18455526.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
506]
gi|425059761|ref|ZP_18463082.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
503]
gi|427396228|ref|ZP_18888987.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus durans
FB129-CNAB-4]
gi|430825540|ref|ZP_19443744.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0164]
gi|430827670|ref|ZP_19445802.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0269]
gi|430830754|ref|ZP_19448810.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0333]
gi|430833039|ref|ZP_19451052.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0679]
gi|430843990|ref|ZP_19461888.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1050]
gi|430845991|ref|ZP_19463856.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1133]
gi|430851716|ref|ZP_19469451.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1258]
gi|430854864|ref|ZP_19472576.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1392]
gi|430860252|ref|ZP_19477856.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1573]
gi|430871327|ref|ZP_19483719.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1575]
gi|430949097|ref|ZP_19486016.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1576]
gi|431005417|ref|ZP_19489063.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1578]
gi|431146192|ref|ZP_19499089.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1620]
gi|431229832|ref|ZP_19502035.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1622]
gi|431252331|ref|ZP_19504389.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1623]
gi|431293391|ref|ZP_19506859.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1626]
gi|431370184|ref|ZP_19509883.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1627]
gi|431412500|ref|ZP_19511935.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1630]
gi|431541950|ref|ZP_19518179.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1731]
gi|431658069|ref|ZP_19523869.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1904]
gi|431746229|ref|ZP_19535063.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2134]
gi|431750068|ref|ZP_19538795.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2297]
gi|431754866|ref|ZP_19543526.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2883]
gi|431759388|ref|ZP_19548002.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E3346]
gi|431767242|ref|ZP_19555697.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1321]
gi|431770866|ref|ZP_19559262.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1644]
gi|431772321|ref|ZP_19560662.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2369]
gi|431775736|ref|ZP_19564006.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2560]
gi|431778832|ref|ZP_19567038.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E4389]
gi|431781852|ref|ZP_19569992.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E6012]
gi|431785771|ref|ZP_19573794.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E6045]
gi|447912524|ref|YP_007393936.1| GTP-binding protein EngB [Enterococcus faecium NRRL B-2354]
gi|68195072|gb|EAN09534.1| GTP-binding protein [Enterococcus faecium DO]
gi|257812696|gb|EEV41454.1| GTP-binding protein [Enterococcus faecium 1,230,933]
gi|257818548|gb|EEV45876.1| GTP-binding protein [Enterococcus faecium 1,231,502]
gi|257825692|gb|EEV52318.1| GTP-binding protein [Enterococcus faecium 1,231,410]
gi|257830724|gb|EEV57331.1| GTP-binding protein [Enterococcus faecium 1,231,408]
gi|260073892|gb|EEW62216.1| GTP-binding protein [Enterococcus faecium C68]
gi|260078345|gb|EEW66050.1| GTP-binding protein [Enterococcus faecium TC 6]
gi|289162325|gb|EFD10184.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
D344SRF]
gi|291589163|gb|EFF20974.1| GTP-binding protein [Enterococcus faecium E1071]
gi|291596312|gb|EFF27571.1| GTP-binding protein [Enterococcus faecium E1679]
gi|291597171|gb|EFF28366.1| GTP-binding protein [Enterococcus faecium U0317]
gi|291606235|gb|EFF35651.1| GTP-binding protein [Enterococcus faecium E1162]
gi|313590558|gb|EFR69403.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX0133a01]
gi|313592284|gb|EFR71129.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX0133B]
gi|313597021|gb|EFR75866.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX0133A]
gi|313599003|gb|EFR77848.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX0133C]
gi|313641038|gb|EFS05618.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX0133a04]
gi|313644737|gb|EFS09317.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX0082]
gi|364089638|gb|EHM32307.1| GTP-binding protein [Enterococcus faecium E4453]
gi|364091664|gb|EHM34108.1| GTP-binding protein [Enterococcus faecium E4452]
gi|378938676|gb|AFC63748.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
Aus0004]
gi|388534049|gb|AFK59241.1| GTP-binding protein [Enterococcus faecium DO]
gi|402919318|gb|EJX39927.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
S447]
gi|402923293|gb|EJX43597.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
V689]
gi|402924904|gb|EJX45087.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
R501]
gi|402933043|gb|EJX52503.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
R499]
gi|402936027|gb|EJX55226.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
R496]
gi|402936097|gb|EJX55295.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
R497]
gi|402937926|gb|EJX56982.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
R494]
gi|402938359|gb|EJX57374.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
R446]
gi|402942060|gb|EJX60694.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
P1190]
gi|402950850|gb|EJX68824.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
P1140]
gi|402951100|gb|EJX69052.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
P1986]
gi|402958727|gb|EJX76026.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
P1139]
gi|402959088|gb|EJX76366.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
P1137]
gi|402962756|gb|EJX79669.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
P1123]
gi|402965915|gb|EJX82596.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV69]
gi|402966555|gb|EJX83179.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV99]
gi|402975789|gb|EJX91722.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV38]
gi|402978172|gb|EJX93934.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV168]
gi|402981008|gb|EJX96564.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV26]
gi|402982347|gb|EJX97817.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV165]
gi|402984474|gb|EJX99782.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV102]
gi|402989788|gb|EJY04695.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV161]
gi|402996791|gb|EJY11155.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E417]
gi|402997041|gb|EJY11391.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV1]
gi|402999285|gb|EJY13482.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E422]
gi|403005102|gb|EJY18850.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
C1904]
gi|403005956|gb|EJY19633.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
C621]
gi|403009095|gb|EJY22563.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
C497]
gi|403012027|gb|EJY25295.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
514]
gi|403016988|gb|EJY29769.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
515]
gi|403020092|gb|EJY32651.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
511]
gi|403020467|gb|EJY33005.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
513]
gi|403024197|gb|EJY36372.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
510]
gi|403029680|gb|EJY41423.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
509]
gi|403036446|gb|EJY47795.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
506]
gi|403043316|gb|EJY54235.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
503]
gi|425722898|gb|EKU85789.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus durans
FB129-CNAB-4]
gi|430446005|gb|ELA55704.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0164]
gi|430482343|gb|ELA59461.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0333]
gi|430484272|gb|ELA61293.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0269]
gi|430486494|gb|ELA63330.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0679]
gi|430496580|gb|ELA72639.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1050]
gi|430539811|gb|ELA80050.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1133]
gi|430542298|gb|ELA82406.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1258]
gi|430547743|gb|ELA87659.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1392]
gi|430552689|gb|ELA92417.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1573]
gi|430557942|gb|ELA97378.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1576]
gi|430558025|gb|ELA97459.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1575]
gi|430561450|gb|ELB00718.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1578]
gi|430573818|gb|ELB12596.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1622]
gi|430575732|gb|ELB14429.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1620]
gi|430578757|gb|ELB17309.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1623]
gi|430582028|gb|ELB20463.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1626]
gi|430583931|gb|ELB22289.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1627]
gi|430589455|gb|ELB27583.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1630]
gi|430592997|gb|ELB30984.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1731]
gi|430600429|gb|ELB38074.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1904]
gi|430608998|gb|ELB46204.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2134]
gi|430610541|gb|ELB47685.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2297]
gi|430618694|gb|ELB55535.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2883]
gi|430626188|gb|ELB62774.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E3346]
gi|430631250|gb|ELB67573.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1321]
gi|430634515|gb|ELB70634.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1644]
gi|430638009|gb|ELB73990.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2369]
gi|430642384|gb|ELB78162.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2560]
gi|430643493|gb|ELB79232.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E4389]
gi|430646930|gb|ELB82391.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E6045]
gi|430648253|gb|ELB83660.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E6012]
gi|445188233|gb|AGE29875.1| GTP-binding protein EngB [Enterococcus faecium NRRL B-2354]
Length = 195
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 104/199 (52%), Gaps = 11/199 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V QAE + S+V + P LPE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ
Sbjct: 2 KVHQAEIIISAVAPKQYPDTQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + I ++ + VD+PGYGYA + R W K + Y R L +V L+D
Sbjct: 62 LNFYLIENALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTRDQLRAVVSLVDLRHKPSQ 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWI 281
D++ +L IP+ +V TK D K P N + I+ F +I
Sbjct: 122 EDIQMYQFLKYYDIPVIVVATKAD---------KIPRGKWNKHESEIKKALDFDRNDTFI 172
Query: 282 MTSSVTNQGRDEILLHMAQ 300
+ SSVT QG++E + Q
Sbjct: 173 LFSSVTKQGKEEAWAAIEQ 191
>gi|329296747|ref|ZP_08254083.1| GTP-binding protein YsxC [Plautia stali symbiont]
Length = 213
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 82/139 (58%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
F+ S+ P+D E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN F +
Sbjct: 11 FMLSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
+ LVDLPGYGYA P E++ W + +Y R L + +L+D P K +D +
Sbjct: 71 VEGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLQKRQALKGLVVLMDIRHPLKDLDQQMV 130
Query: 230 SWLGQNQIPMTLVFTKCDK 248
W GQ+ IP+ ++ TK DK
Sbjct: 131 EWAGQSGIPVMILLTKADK 149
>gi|430819913|ref|ZP_19438557.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0045]
gi|430822581|ref|ZP_19441159.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0120]
gi|430865141|ref|ZP_19480899.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1574]
gi|431743074|ref|ZP_19531955.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2071]
gi|431764162|ref|ZP_19552705.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E4215]
gi|430440116|gb|ELA50393.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0045]
gi|430443158|gb|ELA53155.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0120]
gi|430553219|gb|ELA92920.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1574]
gi|430607438|gb|ELB44758.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2071]
gi|430631347|gb|ELB67669.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E4215]
Length = 195
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 104/199 (52%), Gaps = 11/199 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V QAE + S+V + P LPE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ
Sbjct: 2 KVHQAEIIISAVAPKQYPDTQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + I ++ + VD+PGYGYA + R W K + Y R L +V L+D
Sbjct: 62 LNFYLIENTLHFVDVPGYGYAKVSKTERAKWGKMIETYLTTRDQLRAVVSLVDLRHKPSQ 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWI 281
D++ +L IP+ +V TK D K P N + I+ F +I
Sbjct: 122 EDIQMYQFLKYYDIPVIVVATKAD---------KIPRGKWNKHESEIKKALDFDRNDTFI 172
Query: 282 MTSSVTNQGRDEILLHMAQ 300
+ SSVT QG++E + Q
Sbjct: 173 LFSSVTKQGKEEAWAAIEQ 191
>gi|390630932|ref|ZP_10258904.1| GTP-binding protein YsxC [Weissella confusa LBAE C39-2]
gi|390483820|emb|CCF31252.1| GTP-binding protein YsxC [Weissella confusa LBAE C39-2]
Length = 209
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 92/153 (60%), Gaps = 4/153 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V E V S+VR P+DGLPE A VGRSNVGKSSL N L+ RK A TS PGKTQ
Sbjct: 2 EVHNVEMVMSAVRASQYPTDGLPEVAFVGRSNVGKSSLTNVLINRKSFARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDA-SIPAK 222
+N +++ D + VD+PGYGYA ++ R ++ +Y R L + L+DA +P+K
Sbjct: 62 LNFYKVEDQIFFVDVPGYGYAKVSKKAREEFAVMIGEYLRTREPLKGIVQLVDARHMPSK 121
Query: 223 PIDLEYASWLGQNQI--PMTLVFTKCDKRKKKK 253
D+E +WL + I P+ +V TK DK + K
Sbjct: 122 E-DIEMYNWLTSDDIGLPVLVVATKADKISRGK 153
>gi|406580643|ref|ZP_11055834.1| GTP-binding protein YsxC [Enterococcus sp. GMD4E]
gi|406582950|ref|ZP_11058045.1| GTP-binding protein YsxC [Enterococcus sp. GMD3E]
gi|406585294|ref|ZP_11060286.1| GTP-binding protein YsxC [Enterococcus sp. GMD2E]
gi|406590462|ref|ZP_11064829.1| GTP-binding protein YsxC [Enterococcus sp. GMD1E]
gi|410937248|ref|ZP_11369109.1| GTP-binding protein YsxC [Enterococcus sp. GMD5E]
gi|404453626|gb|EKA00671.1| GTP-binding protein YsxC [Enterococcus sp. GMD4E]
gi|404457356|gb|EKA03900.1| GTP-binding protein YsxC [Enterococcus sp. GMD3E]
gi|404462810|gb|EKA08517.1| GTP-binding protein YsxC [Enterococcus sp. GMD2E]
gi|404469295|gb|EKA14107.1| GTP-binding protein YsxC [Enterococcus sp. GMD1E]
gi|410734359|gb|EKQ76279.1| GTP-binding protein YsxC [Enterococcus sp. GMD5E]
Length = 195
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 104/199 (52%), Gaps = 11/199 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V QAE + S+V + P LPE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ
Sbjct: 2 KVHQAEIIISAVAPKQYPDTQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + I ++ + VD+PGYGYA + R W K + Y R L +V L+D
Sbjct: 62 LNFYLIENALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTRDQLRAVVSLVDLRHKPSQ 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWI 281
D++ +L IP+ +V TK D K P N + I+ F +I
Sbjct: 122 EDIQMYQFLKYYDIPVIVVATKAD---------KIPRGKWNKHESEIKKALDFDHNDTFI 172
Query: 282 MTSSVTNQGRDEILLHMAQ 300
+ SSVT QG++E + Q
Sbjct: 173 LFSSVTKQGKEEAWAAIEQ 191
>gi|294794044|ref|ZP_06759181.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp.
3_1_44]
gi|294455614|gb|EFG23986.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp.
3_1_44]
Length = 232
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 108/207 (52%), Gaps = 21/207 (10%)
Query: 98 KYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKT 157
K + ++ A++ S V+ + P E A +GRSNVGKSSL+NSL + LAL S
Sbjct: 20 KEPKGPRIIAAKYNTSCVKADQYPEGDTVEIAFLGRSNVGKSSLINSLCNYRGLALVSGQ 79
Query: 158 PGKTQCINHFRIND------------SWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNR 205
PGKT+ IN+F I +W+LVDLPGYG+A + R W F DY L+
Sbjct: 80 PGKTKTINYFDIESKEDISETEECRYNWFLVDLPGYGFAKTNKGNRNLWSSFIADYILHS 139
Query: 206 STLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLND 265
L+ + LLID P ID WL + +P+ +V TK DK K+ NL+
Sbjct: 140 ERLMLLCLLIDGRHPEMAIDKVAFDWLVEAGVPLQIVVTKADKLTAKEKSA-----NLSI 194
Query: 266 FQELIQGFFQTAPPWIMTSSVTNQGRD 292
+EL + TA P I+ SS+ + GR+
Sbjct: 195 IKEL----YPTATPPILYSSLKHTGRE 217
>gi|254293246|ref|YP_003059269.1| GTP-binding protein HSR1-related [Hirschia baltica ATCC 49814]
gi|254041777|gb|ACT58572.1| GTP-binding protein HSR1-related [Hirschia baltica ATCC 49814]
Length = 213
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 85/146 (58%)
Query: 106 AQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCIN 165
++ FVK V + P PE A GRSNVGKSSL+N+L RK+LA S PG+TQ IN
Sbjct: 22 SEVNFVKGVVNMQGLPPADRPEIAFAGRSNVGKSSLINALFNRKQLARASGQPGRTQEIN 81
Query: 166 HFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPID 225
F I ++ Y+VDLPGYG+A AP+ + W FT+ Y R+ L VFLLID+ +D
Sbjct: 82 FFTILEALYVVDLPGYGFAKAPKAVVDKWTNFTQTYLRGRTNLQRVFLLIDSRRGVGDVD 141
Query: 226 LEYASWLGQNQIPMTLVFTKCDKRKK 251
L + + +V TK DK KK
Sbjct: 142 RGIMKVLDRAALNYQIVLTKADKLKK 167
>gi|296112713|ref|YP_003626651.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis RH4]
gi|416155879|ref|ZP_11604172.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis
101P30B1]
gi|416220221|ref|ZP_11625313.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis
103P14B1]
gi|416228461|ref|ZP_11627615.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis
46P47B1]
gi|416235793|ref|ZP_11630336.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis
12P80B1]
gi|416241966|ref|ZP_11633100.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis BC7]
gi|416247274|ref|ZP_11635580.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis BC8]
gi|416250069|ref|ZP_11637078.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis CO72]
gi|416254154|ref|ZP_11638588.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis O35E]
gi|421779529|ref|ZP_16216021.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis RH4]
gi|295920407|gb|ADG60758.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis BBH18]
gi|326563796|gb|EGE14047.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis
46P47B1]
gi|326563958|gb|EGE14208.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis
12P80B1]
gi|326566809|gb|EGE16948.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis
103P14B1]
gi|326569867|gb|EGE19917.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis BC8]
gi|326571527|gb|EGE21542.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis BC7]
gi|326575192|gb|EGE25120.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis CO72]
gi|326576722|gb|EGE26629.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis
101P30B1]
gi|326577603|gb|EGE27480.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis O35E]
gi|407813239|gb|EKF84021.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis RH4]
Length = 224
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 90/149 (60%), Gaps = 1/149 (0%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
Q+ Q +F+ S+ + CP D E A GRSN GKSS +N++ +K+LA +SKTPG+TQ
Sbjct: 9 QIHQTKFLLSAPTFKLCPEDTGFEVAFAGRSNAGKSSAINTITHQKQLARSSKTPGRTQM 68
Query: 164 INHFRINDSWY-LVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAK 222
IN F + D +VDLPGYGYAA P ++ W K +DY ++R +L + L+ D P K
Sbjct: 69 INFFMVGDEQARIVDLPGYGYAAVPESMKIKWQKELEDYLVSRQSLAGLVLMTDIRHPLK 128
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDKRKK 251
D + W ++P+ ++ TK DK K+
Sbjct: 129 YFDEQMLHWAKDGKLPVHVLLTKSDKLKR 157
>gi|294792179|ref|ZP_06757327.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp.
6_1_27]
gi|294457409|gb|EFG25771.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp.
6_1_27]
Length = 232
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 106/201 (52%), Gaps = 21/201 (10%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A++ S V+ + P E A +GRSNVGKSSL+NSL + LAL S PGKT+
Sbjct: 26 RIIAAKYNTSCVKADQYPEGDTVEIAFLGRSNVGKSSLINSLCNYRGLALVSGQPGKTKT 85
Query: 164 INHFRIND------------SWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSV 211
IN+F I +W+LVDLPGYG+A + R W F DY L+ L+ +
Sbjct: 86 INYFDIESKEDISDTEERRYNWFLVDLPGYGFAKTNKGNRNLWSSFIADYILHSERLMLL 145
Query: 212 FLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQ 271
LLID P ID WL + +P+ +V TK DK K+ NL+ +EL
Sbjct: 146 CLLIDGRHPEMAIDKVAFDWLVEAGVPLQIVVTKADKLTAKEKSA-----NLSIIKEL-- 198
Query: 272 GFFQTAPPWIMTSSVTNQGRD 292
+ TA P I+ SS+ + GR+
Sbjct: 199 --YPTATPPILYSSLKHTGRE 217
>gi|288553615|ref|YP_003425550.1| GTP-binding protein YsxC [Bacillus pseudofirmus OF4]
gi|288544775|gb|ADC48658.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus pseudofirmus
OF4]
Length = 195
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 86/150 (57%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +AE +V+ E P+ LPE AL GRSNVGKSS +N ++ RK LA TS+ PGKTQ
Sbjct: 2 KVTKAELFTVAVKPEQYPNTPLPEIALAGRSNVGKSSFINKMINRKSLARTSQRPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IN+ + VD+PGYG+A ++ R W K + Y R L +V LID
Sbjct: 62 LNFYAINEQLHFVDVPGYGFAKVSKKEREAWGKMIETYIQQREQLRAVVQLIDVRHKPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D WL IP+ ++ TKCDK K K
Sbjct: 122 DDKLMYEWLKHFDIPVIVIATKCDKIPKGK 151
>gi|386817266|ref|ZP_10104484.1| cell division checkpoint GTPase YihA [Thiothrix nivea DSM 5205]
gi|386421842|gb|EIJ35677.1| cell division checkpoint GTPase YihA [Thiothrix nivea DSM 5205]
Length = 203
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 87/150 (58%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA F++S+ + P++ E A GRSN GKSS++N + +K LA TSKTPG+TQ IN
Sbjct: 7 QAAFLQSATTRKTMPAEAGLEIAFAGRSNAGKSSVINRVCSQKSLARTSKTPGRTQLINF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
FR+ D +LVDLPGYGYA P ++ +W KF + Y + RSTL + L++D P D
Sbjct: 67 FRLPDGSFLVDLPGYGYAKVPEAVKLEWQKFIESYLVQRSTLRGLVLVMDIRHPMTEYDQ 126
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGG 256
W +P+ ++ K DK + G
Sbjct: 127 AMLRWAYGRALPVHVLLNKADKLTRGAGAG 156
>gi|345864937|ref|ZP_08817132.1| putative GTP-binding protein EngB [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345124017|gb|EGW53902.1| putative GTP-binding protein EngB [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 201
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 100/189 (52%), Gaps = 11/189 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+A F+KS+ + P+D E A GRSN GKSS LN L +K LA TSKTPG+TQ +N
Sbjct: 7 RARFLKSAAKLSQAPADQGIEVAFAGRSNAGKSSALNLLCNQKSLARTSKTPGRTQLLNF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F +++ LVDLPGYGYA +++T W DY R L + L++D P K D+
Sbjct: 67 FGLDEQRRLVDLPGYGYAKVAEQVKTIWQSALADYIAQRECLRGLILMMDVRHPLKKFDI 126
Query: 227 EYASWLGQNQIPMTLVFTKCDKRK--KKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
+ W + +P ++ TK DK K + + +E L +F E+ F S
Sbjct: 127 QMLEWNIHHGLPTHILLTKADKLKPGAAQRTLRSVQEELAEFPEITLQLF---------S 177
Query: 285 SVTNQGRDE 293
S+ QG DE
Sbjct: 178 SLKRQGIDE 186
>gi|117620801|ref|YP_854796.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|166225937|sp|A0KEY0.1|ENGB_AERHH RecName: Full=Probable GTP-binding protein EngB
gi|117562208|gb|ABK39156.1| GTP-binding protein YihA [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 216
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 81/142 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+ FV S+ P+DG E A GRSN GKSS LN+L + K LA TSKTPG+TQ IN
Sbjct: 10 KVHFVTSAPDIRHLPNDGGVEIAFAGRSNAGKSSALNTLTKHKNLARTSKTPGRTQLINL 69
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + LVDLPGYGYA P E++ W K +Y R +L + +L+D P K D+
Sbjct: 70 FELEPGKRLVDLPGYGYAQVPLEMKLKWQKSLAEYLQRRESLKGLVILMDIRHPLKDTDM 129
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
W ++P+ L+ TK DK
Sbjct: 130 NMLEWSSHRKLPVMLLLTKADK 151
>gi|416217117|ref|ZP_11624066.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis 7169]
gi|416239163|ref|ZP_11631713.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis BC1]
gi|326560968|gb|EGE11333.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis 7169]
gi|326567351|gb|EGE17466.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis BC1]
Length = 224
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 90/149 (60%), Gaps = 1/149 (0%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
Q+ Q +F+ S+ + CP D E A GRSN GKSS +N++ +K+LA +SKTPG+TQ
Sbjct: 9 QIHQTKFLLSAPTFKLCPEDTGFEVAFAGRSNAGKSSAINTITHQKQLARSSKTPGRTQM 68
Query: 164 INHFRINDSWY-LVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAK 222
IN F + D +VDLPGYGYAA P ++ W K +DY ++R +L + L+ D P K
Sbjct: 69 INFFMVGDEQARIVDLPGYGYAAVPESMKIKWQKELEDYLVSRQSLAGLVLMTDIRHPLK 128
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDKRKK 251
D + W ++P+ ++ TK DK K+
Sbjct: 129 YFDEQMLHWAKDGKLPVHVLLTKSDKLKR 157
>gi|182417604|ref|ZP_02948926.1| GTP-binding protein [Clostridium butyricum 5521]
gi|237668408|ref|ZP_04528392.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium butyricum
E4 str. BoNT E BL5262]
gi|182378559|gb|EDT76088.1| GTP-binding protein [Clostridium butyricum 5521]
gi|237656756|gb|EEP54312.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium butyricum
E4 str. BoNT E BL5262]
Length = 198
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 86/147 (58%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ Q+EF+ S+V+ E P D E A VGRSNVGKSS++NSL RKKLA S TPGKT+
Sbjct: 2 RIKQSEFIISAVKREQYPLDNRNEVAFVGRSNVGKSSIINSLTNRKKLAKVSGTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N F IN+ +YLVDLPGYGYA + + W K + Y R L + LL+D+
Sbjct: 62 VNFFLINNDFYLVDLPGYGYAKVSKSEKDSWGKTIEMYLTEREQLKRIVLLVDSRHKPTG 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRK 250
D+ W + +V TK DK K
Sbjct: 122 DDILMYEWAKHFGYDVVVVATKSDKLK 148
>gi|37524399|ref|NP_927743.1| GTPase EngB [Photorhabdus luminescens subsp. laumondii TTO1]
gi|81572743|sp|Q7N9E9.1|ENGB_PHOLL RecName: Full=Probable GTP-binding protein EngB
gi|36783823|emb|CAE12685.1| Probable GTP-binding protein engB [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 210
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 81/139 (58%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
F+ S+ P D E A GRSN GKSS LN+L ++K LA TSKTPG+TQ IN F +
Sbjct: 13 FITSAPDIRHLPQDMGIEVAFAGRSNAGKSSALNALTKQKSLARTSKTPGRTQLINLFEV 72
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
+ LVDLPGYGYA P E++ W K +Y R L+ + +L+D P K +D +
Sbjct: 73 EEGIRLVDLPGYGYAEVPEEMKRKWQKALGEYLQKRECLIGLVVLMDIRHPLKDLDQQMI 132
Query: 230 SWLGQNQIPMTLVFTKCDK 248
W Q+P+ ++ TK DK
Sbjct: 133 QWAVAMQVPVMVLLTKADK 151
>gi|386392642|ref|ZP_10077423.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Desulfovibrio
sp. U5L]
gi|385733520|gb|EIG53718.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Desulfovibrio
sp. U5L]
Length = 209
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 106/193 (54%), Gaps = 10/193 (5%)
Query: 109 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFR 168
+ V ++ ++ P P+ AL GRSNVGKS+L+N L RK LA S TPGKT+ +N ++
Sbjct: 14 DLVVTAYLSDQIPVVAEPQIALAGRSNVGKSTLVNCLAGRKGLAKISATPGKTRSLNFYQ 73
Query: 169 INDSWY-LVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
+ Y LVDLPGYGYA R W K + Y L +V L+D +P + +D+E
Sbjct: 74 ARATGYCLVDLPGYGYARCSMAERDKWAKLIEAYLRKTDQLRAVVALVDCRLPPQRLDIE 133
Query: 228 YASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVT 287
WL +IPM +V TK DK K++ ++ E ++EL Q F PP I+ S T
Sbjct: 134 LVDWLRARRIPMIMVLTKADKCKQRDREARKKE-----WRELAQPAF---PP-ILFSGKT 184
Query: 288 NQGRDEILLHMAQ 300
GR+ + +A+
Sbjct: 185 GLGREALCRVLAE 197
>gi|194017131|ref|ZP_03055743.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus pumilus ATCC
7061]
gi|194010999|gb|EDW20569.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus pumilus ATCC
7061]
Length = 195
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 104/192 (54%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +++ V S+V+ E PS GLPE AL GRSNVGKSS +NSL+ RK LA TS PGKTQ
Sbjct: 2 KVTKSDIVISAVKPEQYPSGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IND + VD+PGYG+A + R W + + Y R L +V ++D
Sbjct: 62 LNFYIINDMLHFVDVPGYGFAKVSKTEREAWGRMIETYITMREELKAVVQIVDLRHKPSV 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPP--WI 281
D+ +L +P+ ++ TK D K P+ ++++ AP +
Sbjct: 122 DDVNMYEFLKYYGVPVIVIATKAD---------KIPKGKWEKHAKVVKQTLDIAPSDELV 172
Query: 282 MTSSVTNQGRDE 293
+ SS T +G+DE
Sbjct: 173 LFSSETKKGKDE 184
>gi|347759151|ref|YP_004866713.1| hypothetical protein MICA_2409 [Micavibrio aeruginosavorus ARL-13]
gi|347591669|gb|AEP10711.1| conserved hypothetical protein [Micavibrio aeruginosavorus ARL-13]
Length = 213
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 83/141 (58%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
EF + P +G PE A GRSNVGKSSL+N+L RK LA TS TPG+TQ +N F
Sbjct: 22 CEFFAGVMDLNGLPPEGAPEIAFAGRSNVGKSSLINALTARKTLARTSNTPGRTQQLNFF 81
Query: 168 RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
+ ++LVD+PGYGYA +++R +WD Y R +L SVF+LID+ K +DL+
Sbjct: 82 DLGGVFWLVDMPGYGYAKVSKKMREEWDNLIFSYLRGRPSLRSVFVLIDSRHGLKDVDLD 141
Query: 228 YASWLGQNQIPMTLVFTKCDK 248
L + +V TK DK
Sbjct: 142 LIKMLDAAGVSARIVLTKVDK 162
>gi|387907300|ref|YP_006337636.1| GTP-binding protein [Blattabacterium sp. (Blaberus giganteus)]
gi|387582193|gb|AFJ90971.1| GTP-binding protein [Blattabacterium sp. (Blaberus giganteus)]
Length = 211
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 104/180 (57%), Gaps = 6/180 (3%)
Query: 124 GLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYGY 183
PE+A +GRSNVGKSSL+NS+ + KK+A S +PG+TQC+N+F IN WYLVDLPGYG+
Sbjct: 22 NFPEYAFIGRSNVGKSSLINSIAK-KKIAKVSSSPGRTQCMNYFLINHKWYLVDLPGYGF 80
Query: 184 AAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVF 243
+ R+ + K K+Y ++ + +FLLID+ + IDL + L + +VF
Sbjct: 81 FSVKRD-KKKTQKLIKNYIFHKKNITYLFLLIDSRFIIQKIDLYFIQKLNDIKTHFCIVF 139
Query: 244 TKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQLRN 303
TK DK K + + + + ++ GF+ P W S+ G + ++ ++ +L +
Sbjct: 140 TKTDKLKNHRFVDQNISLCIKEIEK--NGFY--MPIWFKVSAKNKYGINNLIQYIKKLND 195
>gi|414341261|ref|YP_006982782.1| protein EngB [Gluconobacter oxydans H24]
gi|411026596|gb|AFV99850.1| EngB [Gluconobacter oxydans H24]
gi|453330535|dbj|GAC87281.1| ribosome biogenesis GTP-binding protein YsxC [Gluconobacter
thailandicus NBRC 3255]
Length = 222
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 103/199 (51%), Gaps = 5/199 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ EF S + E P G PE A GRSNVGKSS++N+L RK LA S PG+T+ +
Sbjct: 21 AGECEFFFGSQKIEQLPPVGRPEVAFAGRSNVGKSSIINALTGRKALARASSEPGRTKQL 80
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F ++D LVD+PGYG+A A + ++ DW Y R+TL V LL+DA I K
Sbjct: 81 NFFNLSDRISLVDMPGYGFAKAAKSVKEDWQNMMFAYLRGRTTLARVILLLDARIELKAS 140
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D + L + + +V TKCD+ + K + + + L P + TS
Sbjct: 141 DKDVMELLDRAAVVFQIVLTKCDQVRPTALKAK-----IAEVEALALKHAAAYPRIVCTS 195
Query: 285 SVTNQGRDEILLHMAQLRN 303
S T +G +++ +A+ +
Sbjct: 196 SQTGEGIEDLRAEIARFAD 214
>gi|251777864|ref|ZP_04820784.1| GTP-binding protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243082179|gb|EES48069.1| GTP-binding protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 198
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 106/192 (55%), Gaps = 7/192 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ Q+EF+ S+V+ P+D E A VGRSNVGKSSL+NSL RKKLA S TPGKT+
Sbjct: 2 RIKQSEFIISAVKPHQYPTDNRNEVAFVGRSNVGKSSLINSLTNRKKLAKVSGTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F IN+ +YLVDLPGYGYA + + W K + Y +R L + L+D+
Sbjct: 62 INFFLINNDFYLVDLPGYGYAKVSKSEKDTWGKTIETYLSHREELKRIVCLVDSRHKPTG 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D+ W + +V TK DK K + K+ E+ + D +L + +
Sbjct: 122 DDIMMYEWAKHFGYDVVIVATKSDKLKNAE--FKKSEKLIRDTLKLTKD-----DKFYFY 174
Query: 284 SSVTNQGRDEIL 295
SS+ +G +E++
Sbjct: 175 SSLNKKGTEELI 186
>gi|157693221|ref|YP_001487683.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus pumilus
SAFR-032]
gi|166920109|sp|A8FFV6.1|ENGB_BACP2 RecName: Full=Probable GTP-binding protein EngB
gi|157681979|gb|ABV63123.1| possible GTPase [Bacillus pumilus SAFR-032]
Length = 195
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 104/192 (54%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +++ V S+V+ E PS GLPE AL GRSNVGKSS +NSL+ RK LA TS PGKTQ
Sbjct: 2 KVTKSDIVISAVKPEQYPSGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IND + VD+PGYG+A + R W + + Y R L +V ++D
Sbjct: 62 LNFYIINDMLHFVDVPGYGFAKVSKTEREAWGRMIETYITMREELKAVVQIVDLRHKPSV 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPP--WI 281
D+ +L +P+ ++ TK D K P+ ++++ AP +
Sbjct: 122 DDVNMYEFLKYYGVPVIVIATKAD---------KIPKGKWEKHAKVVKQTLDIAPSDELV 172
Query: 282 MTSSVTNQGRDE 293
+ SS T +G+DE
Sbjct: 173 LFSSETKKGKDE 184
>gi|417001175|ref|ZP_11941089.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella parvula
ACS-068-V-Sch12]
gi|333975658|gb|EGL76537.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella parvula
ACS-068-V-Sch12]
Length = 232
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 108/207 (52%), Gaps = 21/207 (10%)
Query: 98 KYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKT 157
K + ++ A++ S V+ + P E A +GRSNVGKSSL+NSL + LAL S
Sbjct: 20 KEPKGPRIIAAKYNTSCVKADQYPEGDTVEIAFLGRSNVGKSSLINSLCNYRGLALVSGQ 79
Query: 158 PGKTQCINHFRIND------------SWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNR 205
PGKT+ IN+F I +W+LVDLPGYG+A + R W F DY L+
Sbjct: 80 PGKTKTINYFDIESKEDISDTEERRYNWFLVDLPGYGFAKTNKGNRNLWSSFIADYILHS 139
Query: 206 STLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLND 265
L+ + LLID P ID WL + +P+ +V TK DK K+ NL+
Sbjct: 140 ERLMLLCLLIDGRHPEMTIDKVAFDWLVEAGVPLQIVVTKADKLTAKEKSA-----NLSI 194
Query: 266 FQELIQGFFQTAPPWIMTSSVTNQGRD 292
+EL + TA P I+ SS+ + GR+
Sbjct: 195 IKEL----YPTATPPILYSSLKHTGRE 217
>gi|116492901|ref|YP_804636.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus
pentosaceus ATCC 25745]
gi|122265635|sp|Q03F28.1|ENGB_PEDPA RecName: Full=Probable GTP-binding protein EngB
gi|116103051|gb|ABJ68194.1| Predicted GTPase [Pediococcus pentosaceus ATCC 25745]
Length = 195
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 101/193 (52%), Gaps = 11/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V E S+VR + P G PE ALVGRSNVGKSSL N+L+ RK A TS PGKTQ
Sbjct: 2 EVHNVELQISAVRPDQYPEQGYPEIALVGRSNVGKSSLTNTLINRKSYARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +R+ D + VD+PGYGYA ++ R W K + Y +R L V L+DA
Sbjct: 62 LNFYRVEDQLFFVDVPGYGYAKVSQKEREKWGKMIEKYITSRKELKGVISLVDARHEPTD 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWI 281
D+ +L IP+ +V TK DK + K N + I+ F + +
Sbjct: 122 DDITMYQYLRYYDIPVLVVATKSDKIARGK---------WNQHESKIKKALDFDGSSAFQ 172
Query: 282 MTSSVTNQGRDEI 294
M S+ T G++E+
Sbjct: 173 MFSAQTKMGKEEV 185
>gi|241896577|ref|ZP_04783873.1| GTPase [Weissella paramesenteroides ATCC 33313]
gi|241870169|gb|EER73920.1| GTPase [Weissella paramesenteroides ATCC 33313]
Length = 208
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 93/153 (60%), Gaps = 4/153 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V Q E V S+VR P+DGLPE A VGRSNVGKSSL N L+ RK A TS PGKTQ
Sbjct: 2 EVHQVEMVMSAVRESQYPTDGLPEVAFVGRSNVGKSSLTNVLINRKSFARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDAS-IPAK 222
+N +++ + + VD+PGYGYA ++ R D+ +Y R L + L+DA +P++
Sbjct: 62 LNFYKVENQVFFVDVPGYGYAKVSKKAREDFAIMIGEYLRKRVPLKGIVQLVDARHLPSR 121
Query: 223 PIDLEYASWLGQNQI--PMTLVFTKCDKRKKKK 253
D+E +WL + I P+ +V TK DK + K
Sbjct: 122 E-DIEMYNWLISDDIGLPVLVVATKADKISRGK 153
>gi|387126627|ref|YP_006295232.1| GTP-binding protein EngB [Methylophaga sp. JAM1]
gi|386273689|gb|AFI83587.1| GTP-binding protein EngB [Methylophaga sp. JAM1]
Length = 204
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 101/192 (52%), Gaps = 14/192 (7%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A + S+ + PSD E A GRSN GKSS +N++ K LA SKTPG+TQ IN F
Sbjct: 8 AHYTVSATQLSQLPSDSGFEVAFAGRSNAGKSSAINTITGIKALARISKTPGRTQMINFF 67
Query: 168 RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
++D LVDLPGYGYA P +++ W Y R +L + L++D P K DL+
Sbjct: 68 HLDDERALVDLPGYGYAKVPEKMKLKWQTTLSKYLETRQSLRGLMLMMDIRHPLKNFDLQ 127
Query: 228 YASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLND--FQELIQGFFQTAPPWIMT 283
W Q ++P+ ++ TK DK R N ++ + L D + +Q F
Sbjct: 128 MLDWAKQAELPIHILLTKSDKLGRGAGGNALQQVRKELKDVGLEASVQLF---------- 177
Query: 284 SSVTNQGRDEIL 295
SS+ +QGRDE +
Sbjct: 178 SSLNHQGRDEAI 189
>gi|452975368|gb|EME75187.1| GTP-binding protein YsxC [Bacillus sonorensis L12]
Length = 195
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 106/202 (52%), Gaps = 11/202 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V ++E V S+V+ E P GLPE AL GRSNVGKSS +N+++ RK LA TS PGKTQ
Sbjct: 2 KVTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINTMINRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IND + VD+PGYG+A + R W + + Y R L +V ++D
Sbjct: 62 LNFYIINDVLHFVDVPGYGFAKVSKSEREAWGRMIETYLTLREELKAVVQIVDLRHAPSE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+ +L IP+ ++ TK DK + K + K + LN + I
Sbjct: 122 DDVMMYDFLKHYGIPVIVIATKADKIPKGKWEKHAKVVRQTLN---------IEQGDQLI 172
Query: 282 MTSSVTNQGRDEILLHMAQLRN 303
+ SS T +G+ E + Q+ N
Sbjct: 173 LFSSETKKGKQEAWAAIEQMIN 194
>gi|431925391|ref|YP_007238425.1| cell division checkpoint GTPase YihA [Pseudomonas stutzeri RCH2]
gi|431823678|gb|AGA84795.1| cell division checkpoint GTPase YihA [Pseudomonas stutzeri RCH2]
Length = 217
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA F+ S+ + + CP+D E A GRSN GKSS LN+L LA TSKTPG+TQ +N
Sbjct: 13 QATFMISAAKVDQCPADEGLEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNF 71
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
FR+++ LVDLPGYGYA P L+ W + + Y +R +L VFL++D P D
Sbjct: 72 FRLDEERRLVDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLAGVFLMMDIRHPLTEFDR 131
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
W +Q+P+ ++ TK DK
Sbjct: 132 MMLDWASASQMPLHILLTKSDK 153
>gi|423199151|ref|ZP_17185734.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas hydrophila
SSU]
gi|404629505|gb|EKB26252.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas hydrophila
SSU]
Length = 216
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 80/142 (56%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+ FV S+ P+DG E A GRSN GKSS LN+L + K LA TSKTPG+TQ IN
Sbjct: 10 KVHFVTSAPDIRHLPNDGGVEIAFAGRSNAGKSSALNTLTKHKNLARTSKTPGRTQLINL 69
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + LVDLPGYGYA P E++ W K +Y R +L + +L+D P K D+
Sbjct: 70 FELEPGKRLVDLPGYGYAQVPLEMKLKWQKSLAEYLQRRESLKGLVILMDIRHPLKDTDM 129
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
W +P+ L+ TK DK
Sbjct: 130 NMLEWSAHRALPVMLLLTKADK 151
>gi|52426052|ref|YP_089189.1| ribosome biogenesis GTP-binding protein YsxC [Mannheimia
succiniciproducens MBEL55E]
gi|81609396|sp|Q65R06.1|ENGB_MANSM RecName: Full=Probable GTP-binding protein EngB
gi|52308104|gb|AAU38604.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 205
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 81/139 (58%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
F+ S+ P D E A GRSN GKS+ LN+L +K LA TSKTPG+TQ IN F +
Sbjct: 13 FMTSAANIHQLPKDEGMEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 72
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
+ LVDLPGYGYAA P +++ W K +Y +R L V +L+D P K +D +
Sbjct: 73 EPQYKLVDLPGYGYAAVPEQMKLQWQKSLGEYLQHRECLKGVVILMDIRHPLKDLDQQMI 132
Query: 230 SWLGQNQIPMTLVFTKCDK 248
W + +P+ L+ TK DK
Sbjct: 133 EWAVSSDLPVLLLLTKADK 151
>gi|345017122|ref|YP_004819475.1| GTP-binding protein engB [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032465|gb|AEM78191.1| GTP-binding protein engB [Thermoanaerobacter wiegelii Rt8.B1]
Length = 194
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 101/192 (52%), Gaps = 8/192 (4%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ E V+++ E P D P+ +VGRSNVGKS+L+N+++ RK LA TS PGKT+
Sbjct: 2 KIKTVELVRTAFNEEQYPKDNFPQIVIVGRSNVGKSTLINTVLNRKNLAKTSSKPGKTRG 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN + IN+ +YLVDLPGYGYA +E++ W + + L LLID
Sbjct: 62 INFYLINNGFYLVDLPGYGYAKVSKEMKKQWAHNIETFLNTSKYLRHALLLIDIRRTPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D +W ++P T+V TK DK K E +N + + + F + I+
Sbjct: 122 DDFLMVNWFRHKELPFTVVLTKADKVNK--------SEIVNAVEGICKTFNIDSERIIVF 173
Query: 284 SSVTNQGRDEIL 295
SS+ G ++L
Sbjct: 174 SSLKKMGVSQVL 185
>gi|377557321|ref|ZP_09786971.1| Putative GTP-binding protein engB [Lactobacillus gastricus PS3]
gi|376165727|gb|EHS84668.1| Putative GTP-binding protein engB [Lactobacillus gastricus PS3]
Length = 197
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 80/147 (54%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
QV + E S+V+ E P+ PE ALVGRSNVGKSSL N L+ RK A TS PGKTQ
Sbjct: 2 QVHEVELTISAVKAEQYPATNYPEIALVGRSNVGKSSLTNVLINRKNYAHTSGQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + + Y VD+PGYGYA ++ R + K + Y R L V LID
Sbjct: 62 LNFYEVEHQLYFVDVPGYGYAKVSKKQREQFGKMIEHYLTEREQLRGVVQLIDGRHAPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRK 250
D+ WL QIP +V TK DK K
Sbjct: 122 DDVMMYQWLAYYQIPTLVVATKIDKVK 148
>gi|339496103|ref|YP_004716396.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas stutzeri
ATCC 17588 = LMG 11199]
gi|338803475|gb|AEJ07307.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas stutzeri
ATCC 17588 = LMG 11199]
Length = 216
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA F+ S+ + + CP+D E A GRSN GKSS LN+ + LA TSKTPG+TQ +N
Sbjct: 13 QASFMISAAKVDQCPADEGLEVAFAGRSNAGKSSALNT-ITHANLARTSKTPGRTQLLNF 71
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
FR++D LVDLPGYGYA P L+ W + + Y +R +LV VFL++D P D
Sbjct: 72 FRLDDERRLVDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLVGVFLMMDIRHPLTEFDR 131
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
W + +P+ ++ TK DK
Sbjct: 132 MMLDWANASDMPLHILLTKSDK 153
>gi|376295225|ref|YP_005166455.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio
desulfuricans ND132]
gi|323457786|gb|EGB13651.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio
desulfuricans ND132]
Length = 193
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 106/193 (54%), Gaps = 10/193 (5%)
Query: 109 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFR 168
E VK+ + P+ AL GRSNVGKSSL+N L RK LA S PGKT+ +N++R
Sbjct: 6 ELVKTIYEIKQLEDVDAPQIALAGRSNVGKSSLVNRLAGRKALAKISSKPGKTRSLNYYR 65
Query: 169 IN-DSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
++ D +YLVDLPGYGYA ++ R W K + Y + L +V +L+DA + + +DLE
Sbjct: 66 VDPDGYYLVDLPGYGYAKCSKQERIKWAKLIEAYITGNTHLKAVAVLLDARLSPQKLDLE 125
Query: 228 YASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVT 287
++ IP+ V TK DK K+++ L Q+ Q Q P ++ SS T
Sbjct: 126 LTGYVRGLSIPVIPVLTKADKPKQRE---------LAQLQKQWQDILQQDRPPLLFSSKT 176
Query: 288 NQGRDEILLHMAQ 300
+G +++ + +
Sbjct: 177 GKGEEKLWARLGE 189
>gi|357633022|ref|ZP_09130900.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio sp.
FW1012B]
gi|357581576|gb|EHJ46909.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio sp.
FW1012B]
Length = 209
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 106/193 (54%), Gaps = 10/193 (5%)
Query: 109 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFR 168
+ V ++ ++ P P+ AL GRSNVGKS+L+N L RK LA S TPGKT+ +N ++
Sbjct: 14 DLVVTAYLSDQIPVVAEPQIALAGRSNVGKSTLVNCLAGRKGLAKISATPGKTRSLNFYQ 73
Query: 169 INDSWY-LVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
+ Y LVDLPGYGYA R W K + Y L +V L+D +P + +D+E
Sbjct: 74 ARATGYCLVDLPGYGYARCSMAERDKWAKLIEAYLSKTDQLRAVVALVDCRLPPQRLDIE 133
Query: 228 YASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVT 287
WL +IPM +V TK DK K++ ++ E ++EL Q F PP I+ S T
Sbjct: 134 LVDWLRARRIPMIMVLTKADKCKQRDREARKKE-----WRELAQPAF---PP-ILFSGKT 184
Query: 288 NQGRDEILLHMAQ 300
GR+ + +A+
Sbjct: 185 GLGREALCRVLAE 197
>gi|296135140|ref|YP_003642382.1| ribosome biogenesis GTP-binding protein YsxC [Thiomonas intermedia
K12]
gi|295795262|gb|ADG30052.1| ribosome biogenesis GTP-binding protein YsxC [Thiomonas intermedia
K12]
Length = 230
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 108/206 (52%), Gaps = 10/206 (4%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A F+ +S E+ P GLPE A VGRSN GKS+ +N+L ++++LA SKTPG+TQ IN F
Sbjct: 5 ARFMVTSSSMENLPVTGLPEIAFVGRSNAGKSTAINTLCQQRQLAFASKTPGRTQHINFF 64
Query: 168 RI----NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+ + S LVDLPGYGYAA + + W F Y R LV + LL D+ +
Sbjct: 65 AVGPKDSPSGLLVDLPGYGYAAVAKTDKKRWQLFLAQYLAERGPLVGLILLADSRLGLTE 124
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLND-FQELIQGFFQTAPPWIM 282
DL +++ +P+ ++ TK DK +++ G+R + D + Q TAP +
Sbjct: 125 TDLSLLAFMAPASVPLHVLLTKADKLNRQE--GQRAAQAARDQLAQHAQAVGMTAPISLQ 182
Query: 283 TSSVTNQGRDEILLHMAQLRNYWLKH 308
S T E +QL WL+
Sbjct: 183 LFSATKLSGVE---SASQLIESWLEE 205
>gi|218283666|ref|ZP_03489627.1| hypothetical protein EUBIFOR_02221 [Eubacterium biforme DSM 3989]
gi|218215655|gb|EEC89193.1| hypothetical protein EUBIFOR_02221 [Eubacterium biforme DSM 3989]
Length = 194
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 85/146 (58%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
+EFV S+V E P LPE +VGRSNVGKSS +N+L +KKLA TPGKT+ IN F
Sbjct: 3 SEFVISAVEKEQWPESDLPEVVVVGRSNVGKSSFINALTNKKKLAYVGNTPGKTRLINFF 62
Query: 168 RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
+I+++W LVD+PGYGYA +++ K YF R + V L+DA A DL+
Sbjct: 63 KIDNTWMLVDVPGYGYAKMSKQMLIKMGKMMDTYFNQREQICCVVQLVDARHGATHDDLD 122
Query: 228 YASWLGQNQIPMTLVFTKCDKRKKKK 253
+ I + +V TK DK K K
Sbjct: 123 MIEMIQSLGIQIVIVATKVDKIPKTK 148
>gi|240146202|ref|ZP_04744803.1| ribosome biogenesis GTP-binding protein YsxC [Roseburia
intestinalis L1-82]
gi|257201678|gb|EEU99962.1| ribosome biogenesis GTP-binding protein YsxC [Roseburia
intestinalis L1-82]
Length = 208
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 95/178 (53%), Gaps = 7/178 (3%)
Query: 117 TEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLV 176
T P E A G+SNVGKSSL+N+L+ RK LA TS PGKTQ IN + IND+ YLV
Sbjct: 15 TSKVPDTAYAEVAFAGKSNVGKSSLINALMNRKVLARTSAQPGKTQTINFYNINDAMYLV 74
Query: 177 DLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQ 236
DLPGYGYA A E++ W K ++Y L +VFLLID D W+
Sbjct: 75 DLPGYGYAKASEEVKAKWGKMIENYLHTSKQLKAVFLLIDIRHDPSANDRMMYEWMVYQG 134
Query: 237 IPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEI 294
++ TK DK K+ + ++N+ +E + Q I S+ T QGRDEI
Sbjct: 135 FAPIIIATKLDKIKR-----SQIQKNVKAIREGLN--VQPGTMIIPFSAETKQGRDEI 185
>gi|126734529|ref|ZP_01750275.1| GTP-binding protein [Roseobacter sp. CCS2]
gi|126715084|gb|EBA11949.1| GTP-binding protein [Roseobacter sp. CCS2]
Length = 215
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 97/185 (52%), Gaps = 6/185 (3%)
Query: 106 AQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCIN 165
+ +FVK V + P E GRSNVGKSSL+N++ RK LA S TPG+TQ IN
Sbjct: 25 GETDFVKGVVAMDGLPPADRVEVCFAGRSNVGKSSLINAITGRKGLARASNTPGRTQEIN 84
Query: 166 HFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPID 225
F D Y+VDLPGYG+A AP + W + K Y R TL VF+LIDA AK +D
Sbjct: 85 FFTAGD-IYVVDLPGYGFATAPVAVVEKWQRLLKQYLQGRQTLRRVFVLIDARHGAKAVD 143
Query: 226 LEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSS 285
E S L + + +V TK DK K G+ + +L+ + + P I+TSS
Sbjct: 144 EEIMSLLDSSAVTFQVVMTKVDKLK-----GEALQASLDKTRAALAKHPAAFPELILTSS 198
Query: 286 VTNQG 290
G
Sbjct: 199 EKGDG 203
>gi|421894266|ref|ZP_16324756.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus
pentosaceus IE-3]
gi|385272810|emb|CCG90128.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus
pentosaceus IE-3]
Length = 195
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 83/145 (57%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V E S+VR + P G PE ALVGRSNVGKSSL N+L+ RK A TS PGKTQ
Sbjct: 2 EVHNVELQISAVRPDQYPEQGYPEIALVGRSNVGKSSLTNTLINRKSYARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +R+ D + VD+PGYGYA ++ R W K + Y +R L V L+DA
Sbjct: 62 LNFYRVEDQLFFVDVPGYGYAKVSQKEREKWGKMIEKYITSRKELKGVISLVDARHEPTD 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK 248
D+ +L IP+ +V TK DK
Sbjct: 122 DDITMYQYLRYYDIPVLVVATKSDK 146
>gi|270291412|ref|ZP_06197634.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus
acidilactici 7_4]
gi|304385125|ref|ZP_07367471.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus
acidilactici DSM 20284]
gi|418069408|ref|ZP_12706686.1| GTP-binding protein YsxC [Pediococcus acidilactici MA18/5M]
gi|270280258|gb|EFA26094.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus
acidilactici 7_4]
gi|304329319|gb|EFL96539.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus
acidilactici DSM 20284]
gi|357536877|gb|EHJ20905.1| GTP-binding protein YsxC [Pediococcus acidilactici MA18/5M]
Length = 195
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 100/193 (51%), Gaps = 11/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V E S+V+ E P G PE ALVGRSNVGKSSL N+L+ RK A TS PGKTQ
Sbjct: 2 EVHNVELQISAVKPEQYPEQGYPEIALVGRSNVGKSSLTNTLINRKSYARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +R+ D + VD+PGYGYA ++ R W + + Y +R L V L+DA
Sbjct: 62 LNFYRVEDQLFFVDVPGYGYAKVSQKEREKWGRMIEKYLTSRKELKGVISLVDARHDPTD 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+ +L IP+ +V TK DK R K R ++ LN F +
Sbjct: 122 DDISMYQYLRYYDIPVLVVATKSDKIARGKWNQHESRIKKVLN---------FDQQDAFQ 172
Query: 282 MTSSVTNQGRDEI 294
M S+ T G+D I
Sbjct: 173 MFSAQTKFGKDAI 185
>gi|427439826|ref|ZP_18924390.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus lolii
NGRI 0510Q]
gi|425787958|dbj|GAC45178.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus lolii
NGRI 0510Q]
Length = 169
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 83/145 (57%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V E S+V+ E P G PE ALVGRSNVGKSSL N+L+ RK A TS PGKTQ
Sbjct: 8 EVHNVELQISAVKPEQYPEQGYPEIALVGRSNVGKSSLTNTLINRKSYARTSSQPGKTQT 67
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N +R+ D + VD+PGYGYA ++ R W + + Y +R L V L+DA
Sbjct: 68 LNFYRVEDQLFFVDVPGYGYAKVSQKEREKWGRMIEKYLTSRKELKGVISLVDARHDPTD 127
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK 248
D+ +L IP+ +V TK DK
Sbjct: 128 DDISMYQYLRYYDIPVLVVATKSDK 152
>gi|304437031|ref|ZP_07396994.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sp. oral
taxon 149 str. 67H29BP]
gi|304369982|gb|EFM23644.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sp. oral
taxon 149 str. 67H29BP]
Length = 207
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 91/153 (59%), Gaps = 9/153 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +A ++ S+VR + P + P A +GRSNVGKSSL+NSL R ++LA S PGKTQ I
Sbjct: 7 ITKAAYLASAVRRDQYPEEQRPAVAFIGRSNVGKSSLINSLTRIRQLAHVSGKPGKTQTI 66
Query: 165 NHF----RINDS-----WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLI 215
N + RI+ +LVDLPGYGYA A RE R W KF ++YFL+ L V LL+
Sbjct: 67 NFYELLMRIDGGEERHPVHLVDLPGYGYAKAARESRKTWAKFIEEYFLHAENLHFVCLLL 126
Query: 216 DASIPAKPIDLEYASWLGQNQIPMTLVFTKCDK 248
D P D + WL + IP+ ++ TK DK
Sbjct: 127 DIRHAPMPSDRKMFEWLVSHDIPVLVIATKADK 159
>gi|410692767|ref|YP_003623388.1| putative GTP-binding protein engB [Thiomonas sp. 3As]
gi|294339191|emb|CAZ87545.1| putative GTP-binding protein engB [Thiomonas sp. 3As]
Length = 230
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 108/206 (52%), Gaps = 10/206 (4%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A F+ +S E+ P GLPE A VGRSN GKS+ +N+L ++++LA SKTPG+TQ IN F
Sbjct: 5 ARFMVTSSSMENLPVTGLPEIAFVGRSNAGKSTAINTLCQQRQLAFASKTPGRTQHINFF 64
Query: 168 RI----NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+ + S LVDLPGYGYAA + + W F Y R LV + LL D+ +
Sbjct: 65 AVGPKDSPSGLLVDLPGYGYAAVAKTDKKRWQLFLAQYLAERGPLVGLILLADSRLGLTE 124
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLND-FQELIQGFFQTAPPWIM 282
DL +++ +P+ ++ TK DK +++ G+R + D + Q TAP +
Sbjct: 125 TDLSLLAFMAPASVPLHVLLTKADKLNRQE--GQRAAQAARDQLAQHAQAVGMTAPISLQ 182
Query: 283 TSSVTNQGRDEILLHMAQLRNYWLKH 308
S T E +QL WL+
Sbjct: 183 LFSATKLSGVE---SASQLIESWLEE 205
>gi|104773863|ref|YP_618843.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
delbrueckii subsp. bulgaricus ATCC 11842]
gi|116513870|ref|YP_812776.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|385815490|ref|YP_005851881.1| GTP-binding protein ENGB family [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|418029244|ref|ZP_12667792.1| hypothetical protein LDBUL1632_00586 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|119369207|sp|Q1GAP7.1|ENGB_LACDA RecName: Full=Probable GTP-binding protein EngB
gi|122275360|sp|Q04B34.1|ENGB_LACDB RecName: Full=Probable GTP-binding protein EngB
gi|103422944|emb|CAI97606.1| Conserved hypothetical protein [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116093185|gb|ABJ58338.1| Predicted GTPase [Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|325125527|gb|ADY84857.1| GTP-binding protein ENGB family [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|354690962|gb|EHE90904.1| hypothetical protein LDBUL1632_00586 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 200
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ Q+EF S+V+ P GL E AL GRSNVGKSS +N+L++RK LA TS +PGKTQ +
Sbjct: 3 INQSEFSVSAVKASQYPEGGLDEIALAGRSNVGKSSFINTLLQRKNLARTSSSPGKTQTL 62
Query: 165 NHFRIND---SWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
N +R++ +YLVD+PGYGYA ++ R ++ + +DY R+ L + L+ID
Sbjct: 63 NFYRVDSDQADFYLVDVPGYGYAKVSKKQREEFGEMIQDYLETRAYLKGLILMIDGRHEP 122
Query: 222 KPIDL---EYASWLGQNQIPMTLVFTKCDKRKK----KKNGGKRPEENLN 264
D+ +YA +L +P+ LV TK DK KK K R NLN
Sbjct: 123 TVDDIAMYDYAQYL---NLPILLVATKMDKIKKNAFNKTEAAFRKHLNLN 169
>gi|385814047|ref|YP_005850440.1| GTP-binding protein engB [Lactobacillus helveticus H10]
gi|323466766|gb|ADX70453.1| Probable GTP-binding protein engB [Lactobacillus helveticus H10]
Length = 196
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 90/147 (61%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ + + S+VR + P D L E AL GRSNVGKSSL+N+L+ RK LA TS PGKTQ +
Sbjct: 3 IKSSNYAVSAVREDQYPKDNLSEIALSGRSNVGKSSLINTLLNRKNLARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + IND +YLVD+PGYGYA ++ R ++ + +DY R L + +LID+
Sbjct: 63 NFYLINDEFYLVDVPGYGYARVSQKKRQEFGEMIQDYLETRPNLKGLVILIDSRHEPTKD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKK 251
D+ ++ +P+ +V TK DK KK
Sbjct: 123 DIAMYNYAQYLNLPILVVCTKIDKIKK 149
>gi|325265778|ref|ZP_08132465.1| ribosome biogenesis GTP-binding protein YsxC [Kingella
denitrificans ATCC 33394]
gi|324982761|gb|EGC18386.1| ribosome biogenesis GTP-binding protein YsxC [Kingella
denitrificans ATCC 33394]
Length = 220
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 111/202 (54%), Gaps = 11/202 (5%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A+F + +D P D E A VGRSN GKSS +N+L +LA SKTPG+TQ IN F
Sbjct: 7 AKFFTTVNHLKDLP-DTAAEIAFVGRSNAGKSSAINALCNHVRLAYVSKTPGRTQHINFF 65
Query: 168 RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
+++ ++VDLPGYGYA P +R W K DY R +L+ + L++D P KP+D++
Sbjct: 66 ELSNGHFMVDLPGYGYAQVPEAIRAHWVKLLGDYLQTRPSLLGLVLIMDIRHPLKPLDIQ 125
Query: 228 YASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI-MTSSV 286
+ Q + P+ ++ +K DK K + + L+ ++ ++ F + + + SS+
Sbjct: 126 MLDFFAQTERPVHILLSKADKLSKNEQ-----IKTLSSVKKALKPFTERQTVTVQLFSSL 180
Query: 287 TNQGRDEILLHMAQLRNYWLKH 308
QG +E+ H+ Q W H
Sbjct: 181 KKQGIEEV-EHIVQ---SWFDH 198
>gi|163815262|ref|ZP_02206639.1| hypothetical protein COPEUT_01422 [Coprococcus eutactus ATCC 27759]
gi|158449457|gb|EDP26452.1| ribosome biogenesis GTP-binding protein YsxC [Coprococcus eutactus
ATCC 27759]
Length = 206
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 102/191 (53%), Gaps = 9/191 (4%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V AE T P + LPE A G+SNVGKSSL+N L+ RK LA TS PGKTQ I
Sbjct: 3 VKSAELETVCGITSKLPDNELPEIAFAGKSNVGKSSLINGLLNRKSLARTSAQPGKTQTI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDA-SIPAKP 223
N + IN Y VDLPGYGYA E+R W K ++Y + L VFLLID +P++
Sbjct: 63 NFYNINKELYFVDLPGYGYAKVSVEIRAKWGKMIENYLHTSAQLKKVFLLIDIRHVPSEN 122
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
L Y W+ N ++ TK DK K+ + ++NL +E + I
Sbjct: 123 DCLMY-DWIVNNGYEPVIICTKLDKIKR-----SQVQKNLKQIKEKLG--LVPGTRMIPF 174
Query: 284 SSVTNQGRDEI 294
S++T QG+D+I
Sbjct: 175 SALTKQGKDDI 185
>gi|400286443|ref|ZP_10788475.1| ribosome biogenesis GTP-binding protein YsxC [Psychrobacter sp.
PAMC 21119]
Length = 287
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 91/148 (61%), Gaps = 1/148 (0%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ Q EF+ S+ CP D E A GRSN GKSS +N+L +++LA +SKTPG+TQ
Sbjct: 43 RIQQTEFMTSAPTFRLCPPDVGLEVAFAGRSNAGKSSAINALTNQRQLARSSKTPGRTQM 102
Query: 164 INHFRINDSWY-LVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAK 222
IN F I D LVDLPGYGYAA P E++ +W ++Y ++RS+L + L+ D P K
Sbjct: 103 INFFSIGDKHRRLVDLPGYGYAAVPLEMKKEWQVELEEYLVSRSSLAGLVLMTDIRHPLK 162
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDKRK 250
D + W + ++P+ ++ TK DK K
Sbjct: 163 FFDEQMLFWAKEGELPVHILLTKADKLK 190
>gi|339022174|ref|ZP_08646137.1| GTP-binding protein [Acetobacter tropicalis NBRC 101654]
gi|338750807|dbj|GAA09441.1| GTP-binding protein [Acetobacter tropicalis NBRC 101654]
Length = 227
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 101/193 (52%), Gaps = 5/193 (2%)
Query: 109 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFR 168
+F+ + + P LPE A GRSNVGKSSL+N+L RK LA S PG+T+ +N F
Sbjct: 33 DFIFGAQKLGQLPPQTLPEIAFAGRSNVGKSSLVNALTGRKTLARASSEPGRTKQLNFFN 92
Query: 169 INDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEY 228
+ D LVD+PGYGYA A + ++ DW + DY R L V LL+DA I KP D E
Sbjct: 93 LADRLMLVDMPGYGYAKAAKSVKEDWQEMMFDYLRGRPGLKRVMLLLDARIELKPHDEEV 152
Query: 229 ASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTN 288
L + + +V TKCD K R EE + + + P ++SS T
Sbjct: 153 MKLLDRAAVSFQIVLTKCDAVKPAPLA--RKEEAI---LAVARRHAAACPFLSLSSSETG 207
Query: 289 QGRDEILLHMAQL 301
QG +++ +A+
Sbjct: 208 QGIEQLRAELAEF 220
>gi|336054312|ref|YP_004562599.1| GTPase [Lactobacillus kefiranofaciens ZW3]
gi|333957689|gb|AEG40497.1| GTPase [Lactobacillus kefiranofaciens ZW3]
Length = 196
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 91/150 (60%), Gaps = 6/150 (4%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ + + S+V+ P D LPE AL GRSNVGKSSL+N+ ++RK LA TS PGKTQ +
Sbjct: 3 IKSSSYAVSAVKESQYPQDNLPEIALAGRSNVGKSSLINTFLKRKNLARTSSQPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + +N+ +YLVD+PGYGYA ++ R ++ + +DY R L + +L+D
Sbjct: 63 NFYLVNEEFYLVDVPGYGYAKVSQKKRQEFGQMIQDYLETRPNLKGLIILVDGRHEPTKD 122
Query: 225 DL---EYASWLGQNQIPMTLVFTKCDKRKK 251
D+ YA +L IP+ +V TK DK KK
Sbjct: 123 DIAMYNYAQYLN---IPILVVCTKMDKIKK 149
>gi|229918355|ref|YP_002887001.1| ribosome biogenesis GTP-binding protein YsxC [Exiguobacterium sp.
AT1b]
gi|259645896|sp|C4L4J3.1|ENGB_EXISA RecName: Full=Probable GTP-binding protein EngB
gi|229469784|gb|ACQ71556.1| small GTP-binding protein [Exiguobacterium sp. AT1b]
Length = 197
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 105/190 (55%), Gaps = 7/190 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +AEFV S+V + P LPE AL GRSNVGKSS +N + +RK LA TS PGKTQ
Sbjct: 2 KINKAEFVTSAVAPDHYPVHELPEVALAGRSNVGKSSFINKICQRKALARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N F IND VD+PGYGYA + R W + Y ++ L V LL+D
Sbjct: 62 LNFFNINDEIMFVDVPGYGYAKVSKTEREKWGVMMEQYLTSQEALRGVVLLVDIRHDPTG 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D+ ++L +IP+ +V TK DK KK + +++ + +Q F + ++
Sbjct: 122 DDVTMYNFLKHYEIPVIVVATKLDKIKKSQR-----QKHEAAVKRKLQ--FDPSDRFVAF 174
Query: 284 SSVTNQGRDE 293
S+ T +G+DE
Sbjct: 175 SAETAEGKDE 184
>gi|172058153|ref|YP_001814613.1| ribosome biogenesis GTP-binding protein YsxC [Exiguobacterium
sibiricum 255-15]
gi|407477828|ref|YP_006791705.1| GTP-binding protein EngB [Exiguobacterium antarcticum B7]
gi|229807534|sp|B1YJV8.1|ENGB_EXIS2 RecName: Full=Probable GTP-binding protein EngB
gi|171990674|gb|ACB61596.1| small GTP-binding protein [Exiguobacterium sibiricum 255-15]
gi|407061907|gb|AFS71097.1| GTP-binding protein EngB [Exiguobacterium antarcticum B7]
Length = 193
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 102/189 (53%), Gaps = 7/189 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +A+F+ S V E P LPE AL GRSNVGKSS +N LV+RK LA TS PGKTQ
Sbjct: 2 KIYKADFITSGVNPEHYPEPLLPEVALAGRSNVGKSSFINKLVQRKALARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N F IND VD+PGYGYA + R W K + YF R L V LL+D
Sbjct: 62 LNFFNINDEVMFVDVPGYGYAKVSKTEREAWGKMMEKYFTTREILKGVVLLVDIRHEPSA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D+ +L + + +V TK DK K+ G+R ++ + + +Q F +I
Sbjct: 122 DDVIMYDFLKYYDLSVIVVATKLDKIKR----GQR-DKQIAAIKRKLQ--FDGQDTFIPF 174
Query: 284 SSVTNQGRD 292
SS T +G D
Sbjct: 175 SSETGEGVD 183
>gi|418035991|ref|ZP_12674429.1| hypothetical protein LDBUL1519_01129 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|354689150|gb|EHE89162.1| hypothetical protein LDBUL1519_01129 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 200
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ Q+EF S+V+ P GL E AL GRSNVGKSS +N+L++RK LA TS +PGKTQ +
Sbjct: 3 INQSEFSVSAVKASQYPKGGLDEIALAGRSNVGKSSFINTLLQRKNLARTSSSPGKTQTL 62
Query: 165 NHFRIND---SWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
N +R++ +YLVD+PGYGYA ++ R ++ + +DY R+ L + L+ID
Sbjct: 63 NFYRVDSDQADFYLVDVPGYGYAKVSKKQREEFGEMIQDYLETRAYLKGLILMIDGRHEP 122
Query: 222 KPIDL---EYASWLGQNQIPMTLVFTKCDKRKK----KKNGGKRPEENLN 264
D+ +YA +L +P+ LV TK DK KK K R NLN
Sbjct: 123 TVDDIAMYDYAQYL---NLPILLVATKMDKIKKNAFNKTEAAFRKHLNLN 169
>gi|29376444|ref|NP_815598.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
V583]
gi|227519262|ref|ZP_03949311.1| GTPase [Enterococcus faecalis TX0104]
gi|227555531|ref|ZP_03985578.1| GTPase [Enterococcus faecalis HH22]
gi|229545497|ref|ZP_04434222.1| GTPase [Enterococcus faecalis TX1322]
gi|229549743|ref|ZP_04438468.1| GTPase [Enterococcus faecalis ATCC 29200]
gi|255972439|ref|ZP_05423025.1| GTP-binding protein [Enterococcus faecalis T1]
gi|255975539|ref|ZP_05426125.1| GTP-binding protein [Enterococcus faecalis T2]
gi|256762853|ref|ZP_05503433.1| GTP-binding protein [Enterococcus faecalis T3]
gi|256853437|ref|ZP_05558807.1| GTPase EngB [Enterococcus faecalis T8]
gi|256959235|ref|ZP_05563406.1| GTP-binding protein [Enterococcus faecalis DS5]
gi|256961588|ref|ZP_05565759.1| GTP-binding protein [Enterococcus faecalis Merz96]
gi|256964804|ref|ZP_05568975.1| GTP-binding protein [Enterococcus faecalis HIP11704]
gi|257079303|ref|ZP_05573664.1| GTP-binding protein [Enterococcus faecalis JH1]
gi|257082258|ref|ZP_05576619.1| GTP-binding protein [Enterococcus faecalis E1Sol]
gi|257084875|ref|ZP_05579236.1| GTP-binding protein [Enterococcus faecalis Fly1]
gi|257087128|ref|ZP_05581489.1| GTP-binding protein [Enterococcus faecalis D6]
gi|257416358|ref|ZP_05593352.1| GTP-binding protein [Enterococcus faecalis ARO1/DG]
gi|257419606|ref|ZP_05596600.1| GTP-binding protein [Enterococcus faecalis T11]
gi|257422288|ref|ZP_05599278.1| GTPase engB [Enterococcus faecalis X98]
gi|293382410|ref|ZP_06628347.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
R712]
gi|293388259|ref|ZP_06632775.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
S613]
gi|294779795|ref|ZP_06745182.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
PC1.1]
gi|300861039|ref|ZP_07107126.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TUSoD Ef11]
gi|307268263|ref|ZP_07549647.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX4248]
gi|307272886|ref|ZP_07554133.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0855]
gi|307275639|ref|ZP_07556780.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX2134]
gi|307280531|ref|ZP_07561580.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0860]
gi|307287932|ref|ZP_07567965.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0109]
gi|307295962|ref|ZP_07575794.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0411]
gi|312900931|ref|ZP_07760225.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0470]
gi|312902701|ref|ZP_07761905.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0635]
gi|312908363|ref|ZP_07767327.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
DAPTO 512]
gi|312910564|ref|ZP_07769406.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
DAPTO 516]
gi|312950950|ref|ZP_07769860.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0102]
gi|384513544|ref|YP_005708637.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
OG1RF]
gi|384518925|ref|YP_005706230.1| GTPase, EngB subfamily [Enterococcus faecalis 62]
gi|397700152|ref|YP_006537940.1| GTPase, EngB subfamily [Enterococcus faecalis D32]
gi|421514291|ref|ZP_15960982.1| GTP-binding protein EngB [Enterococcus faecalis ATCC 29212]
gi|422686335|ref|ZP_16744533.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX4000]
gi|422690261|ref|ZP_16748318.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0630]
gi|422692748|ref|ZP_16750763.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0031]
gi|422695299|ref|ZP_16753287.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX4244]
gi|422697135|ref|ZP_16755081.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX1346]
gi|422702081|ref|ZP_16759921.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX1342]
gi|422704827|ref|ZP_16762637.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX1302]
gi|422705484|ref|ZP_16763286.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0043]
gi|422708739|ref|ZP_16766267.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0027]
gi|422713230|ref|ZP_16769983.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0309A]
gi|422717233|ref|ZP_16773923.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0309B]
gi|422719413|ref|ZP_16776054.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0017]
gi|422723964|ref|ZP_16780454.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX2137]
gi|422725148|ref|ZP_16781616.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0312]
gi|422730191|ref|ZP_16786584.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0012]
gi|422732502|ref|ZP_16788833.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0645]
gi|422735820|ref|ZP_16792086.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX1341]
gi|422741794|ref|ZP_16795816.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX2141]
gi|422868916|ref|ZP_16915441.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX1467]
gi|424672898|ref|ZP_18109841.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
599]
gi|424678390|ref|ZP_18115230.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV103]
gi|424681763|ref|ZP_18118549.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV116]
gi|424684575|ref|ZP_18121286.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV129]
gi|424687718|ref|ZP_18124347.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV25]
gi|424691000|ref|ZP_18127527.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV31]
gi|424694689|ref|ZP_18131085.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV37]
gi|424697262|ref|ZP_18133592.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV41]
gi|424702120|ref|ZP_18138283.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV62]
gi|424704340|ref|ZP_18140442.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV63]
gi|424712807|ref|ZP_18144976.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV65]
gi|424715919|ref|ZP_18145241.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV68]
gi|424722311|ref|ZP_18151375.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV72]
gi|424724517|ref|ZP_18153460.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV73]
gi|424726710|ref|ZP_18155364.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV81]
gi|424740465|ref|ZP_18168847.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV85]
gi|424749822|ref|ZP_18177899.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV93]
gi|424759979|ref|ZP_18187634.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
R508]
gi|428767324|ref|YP_007153435.1| probable GTP-binding protein engB [Enterococcus faecalis str.
Symbioflor 1]
gi|430361686|ref|ZP_19426763.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
OG1X]
gi|430368573|ref|ZP_19428314.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
M7]
gi|81838891|sp|Q833M8.1|ENGB_ENTFA RecName: Full=Probable GTP-binding protein EngB
gi|29343908|gb|AAO81668.1| GTP-binding protein [Enterococcus faecalis V583]
gi|227073274|gb|EEI11237.1| GTPase [Enterococcus faecalis TX0104]
gi|227175336|gb|EEI56308.1| GTPase [Enterococcus faecalis HH22]
gi|229305012|gb|EEN71008.1| GTPase [Enterococcus faecalis ATCC 29200]
gi|229309413|gb|EEN75400.1| GTPase [Enterococcus faecalis TX1322]
gi|255963457|gb|EET95933.1| GTP-binding protein [Enterococcus faecalis T1]
gi|255968411|gb|EET99033.1| GTP-binding protein [Enterococcus faecalis T2]
gi|256684104|gb|EEU23799.1| GTP-binding protein [Enterococcus faecalis T3]
gi|256711896|gb|EEU26934.1| GTPase EngB [Enterococcus faecalis T8]
gi|256949731|gb|EEU66363.1| GTP-binding protein [Enterococcus faecalis DS5]
gi|256952084|gb|EEU68716.1| GTP-binding protein [Enterococcus faecalis Merz96]
gi|256955300|gb|EEU71932.1| GTP-binding protein [Enterococcus faecalis HIP11704]
gi|256987333|gb|EEU74635.1| GTP-binding protein [Enterococcus faecalis JH1]
gi|256990288|gb|EEU77590.1| GTP-binding protein [Enterococcus faecalis E1Sol]
gi|256992905|gb|EEU80207.1| GTP-binding protein [Enterococcus faecalis Fly1]
gi|256995158|gb|EEU82460.1| GTP-binding protein [Enterococcus faecalis D6]
gi|257158186|gb|EEU88146.1| GTP-binding protein [Enterococcus faecalis ARO1/DG]
gi|257161434|gb|EEU91394.1| GTP-binding protein [Enterococcus faecalis T11]
gi|257164112|gb|EEU94072.1| GTPase engB [Enterococcus faecalis X98]
gi|291080186|gb|EFE17550.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
R712]
gi|291082341|gb|EFE19304.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
S613]
gi|294453169|gb|EFG21584.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
PC1.1]
gi|300850078|gb|EFK77828.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TUSoD Ef11]
gi|306496293|gb|EFM65872.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0411]
gi|306501077|gb|EFM70384.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0109]
gi|306504079|gb|EFM73295.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0860]
gi|306507744|gb|EFM76873.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX2134]
gi|306510500|gb|EFM79523.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0855]
gi|306515423|gb|EFM83954.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX4248]
gi|310625777|gb|EFQ09060.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
DAPTO 512]
gi|310631099|gb|EFQ14382.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0102]
gi|310633755|gb|EFQ17038.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0635]
gi|311289112|gb|EFQ67668.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
DAPTO 516]
gi|311292030|gb|EFQ70586.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0470]
gi|315025927|gb|EFT37859.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX2137]
gi|315028965|gb|EFT40897.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX4000]
gi|315033239|gb|EFT45171.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0017]
gi|315036724|gb|EFT48656.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0027]
gi|315143499|gb|EFT87515.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX2141]
gi|315147582|gb|EFT91598.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX4244]
gi|315149320|gb|EFT93336.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0012]
gi|315152207|gb|EFT96223.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0031]
gi|315157012|gb|EFU01029.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0043]
gi|315159834|gb|EFU03851.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0312]
gi|315161526|gb|EFU05543.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0645]
gi|315163616|gb|EFU07633.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX1302]
gi|315167355|gb|EFU11372.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX1341]
gi|315169562|gb|EFU13579.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX1342]
gi|315174261|gb|EFU18278.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX1346]
gi|315574491|gb|EFU86682.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0309B]
gi|315576776|gb|EFU88967.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0630]
gi|315581847|gb|EFU94038.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0309A]
gi|323481058|gb|ADX80497.1| GTPase, EngB subfamily [Enterococcus faecalis 62]
gi|327535433|gb|AEA94267.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
OG1RF]
gi|329572879|gb|EGG54504.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX1467]
gi|397336791|gb|AFO44463.1| GTPase, EngB subfamily [Enterococcus faecalis D32]
gi|401672682|gb|EJS79149.1| GTP-binding protein EngB [Enterococcus faecalis ATCC 29212]
gi|402350447|gb|EJU85350.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV116]
gi|402351718|gb|EJU86598.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV103]
gi|402353404|gb|EJU88236.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
599]
gi|402360911|gb|EJU95504.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV129]
gi|402363066|gb|EJU97575.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV31]
gi|402363510|gb|EJU97988.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV25]
gi|402370126|gb|EJV04366.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV62]
gi|402370235|gb|EJV04458.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV37]
gi|402376200|gb|EJV10159.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV41]
gi|402379684|gb|EJV13476.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV65]
gi|402382429|gb|EJV16096.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV63]
gi|402389193|gb|EJV22594.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV68]
gi|402389318|gb|EJV22717.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV72]
gi|402394788|gb|EJV27938.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV73]
gi|402398711|gb|EJV31635.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV81]
gi|402402078|gb|EJV34814.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV85]
gi|402404050|gb|EJV36684.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
R508]
gi|402407515|gb|EJV40041.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV93]
gi|427185497|emb|CCO72721.1| probable GTP-binding protein engB [Enterococcus faecalis str.
Symbioflor 1]
gi|429512239|gb|ELA01847.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
OG1X]
gi|429516329|gb|ELA05823.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
M7]
Length = 193
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 100/190 (52%), Gaps = 11/190 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V AE V S+V + P LPE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ +
Sbjct: 3 VHNAEIVISAVSPKQYPESQLPEIALAGRSNVGKSSFINTLINRKNLARTSGKPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + I D+ + VD+PGYGYA + R W K + Y R L +V LID P
Sbjct: 63 NFYLIEDALHFVDVPGYGYAKVSKTERAKWGKMIETYITQREQLRAVVSLIDLRHPPTQD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWIM 282
D++ +L +P+ +V TK D K P N + +I+ F +I+
Sbjct: 123 DIQMYEFLKYYDLPVIIVATKAD---------KIPRGKWNKHESVIKKALNFDKQDDFII 173
Query: 283 TSSVTNQGRD 292
SS T +G++
Sbjct: 174 FSSETKEGKE 183
>gi|20807122|ref|NP_622293.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
tengcongensis MB4]
gi|254479256|ref|ZP_05092599.1| putative small GTP-binding protein domain protein
[Carboxydibrachium pacificum DSM 12653]
gi|24418374|sp|Q8RC22.1|ENGB_THETN RecName: Full=Probable GTP-binding protein EngB
gi|20515616|gb|AAM23897.1| predicted GTPases [Thermoanaerobacter tengcongensis MB4]
gi|214034794|gb|EEB75525.1| putative small GTP-binding protein domain protein
[Carboxydibrachium pacificum DSM 12653]
Length = 194
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 105/193 (54%), Gaps = 10/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ P D +P+ A+VG+SNVGKS+L+N+++ RK LA S TPGKT+
Sbjct: 2 KIKTAEFVGSAFNESQYPKDKIPQIAIVGKSNVGKSTLINTVLGRKNLAKVSSTPGKTRG 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRS-TLVSVFLLIDASIPAK 222
IN + +N ++Y+VDLPGYGYA +E++ W + + FLN S L LLID
Sbjct: 62 INFYLVNRAFYIVDLPGYGYAKVSKEMKKQW-AYNIETFLNTSKNLKHALLLIDIRREPT 120
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D +W +P ++V TK DK K E + + + F ++ I+
Sbjct: 121 EDDFMMVNWFSFKNLPFSVVLTKADKVNK--------SEANKAIENICRSFNISSDRVIV 172
Query: 283 TSSVTNQGRDEIL 295
S+V G EIL
Sbjct: 173 FSAVEKTGISEIL 185
>gi|416053384|ref|ZP_11578849.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
e str. SC1083]
gi|347991159|gb|EGY32658.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
e str. SC1083]
Length = 204
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 91/164 (55%), Gaps = 2/164 (1%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
F+ SS + P D E A GRSN GKS+ LN+L +K LA TSKTPG+TQ IN F +
Sbjct: 13 FLTSSPNLKSLPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 72
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
LVDLPGYGYAA P +++ W + +Y R L + +L+D P K +D +
Sbjct: 73 EPQCKLVDLPGYGYAAVPEQMKLQWQQVLGEYLQKRECLAGIVILMDIRHPLKDVDQQMI 132
Query: 230 SWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQ 271
W +Q+P+ L+ TK DK + ++ K E + FQ IQ
Sbjct: 133 EWAVASQLPVLLLLTKADKLSQSERSKQVKMVREAILPFQGDIQ 176
>gi|401565806|ref|ZP_10806624.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sp.
FOBRC6]
gi|400185012|gb|EJO19247.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sp.
FOBRC6]
Length = 207
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 111/205 (54%), Gaps = 17/205 (8%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +A ++ S+VR + P + P A +GRSNVGKSSL+NSL R ++LA S PGKTQ I
Sbjct: 7 ITKATYLASAVRRDQYPEERRPAVAFIGRSNVGKSSLINSLTRIRQLARVSSKPGKTQTI 66
Query: 165 NHF----RINDS-----WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLI 215
N + RI+ +LVDLPGYGYA RE R W KF ++YFL+ L V LL+
Sbjct: 67 NFYELLLRIDGGEERHPVHLVDLPGYGYAKVGRESRKTWAKFIEEYFLHAEELRFVCLLL 126
Query: 216 DASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQ 275
D D SWL ++ IP+ ++ TK DK K + + Q+ +
Sbjct: 127 DIRHTPMESDCRMFSWLVEHDIPVLVIATKADKIGKNARNAQ-----IAAIQKKLGVPEL 181
Query: 276 TAPPWIMTSSVTNQGRDEILLHMAQ 300
T P+ +S N+GR ++L MA+
Sbjct: 182 TILPY---ASTKNEGRSDLLDVMAE 203
>gi|295094046|emb|CBK83137.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Coprococcus sp.
ART55/1]
Length = 198
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 97/192 (50%), Gaps = 11/192 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V AE T P + LPE A G+SNVGKSSL+N L+ RK LA TS PGKTQ I
Sbjct: 3 VKSAELETVCGITSKLPDNDLPEIAFAGKSNVGKSSLINGLLNRKSLARTSAQPGKTQTI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + +N + Y VDLPGYGYA E+R W K + Y L VFLLID
Sbjct: 63 NFYNVNKNLYFVDLPGYGYAKVSVEIRAKWGKMIERYLHGSPQLKKVFLLIDIRHVPSEN 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT- 283
D W+ N ++ TK DK K+ + ++NL +LI+ P M
Sbjct: 123 DCMMYDWIVDNGYEPVIICTKLDKIKR-----SQVQKNL----KLIREKLDLVPGTTMIP 173
Query: 284 -SSVTNQGRDEI 294
S+ T QGRDEI
Sbjct: 174 FSAQTKQGRDEI 185
>gi|417810492|ref|ZP_12457171.1| GTPase [Lactobacillus salivarius GJ-24]
gi|335349288|gb|EGM50788.1| GTPase [Lactobacillus salivarius GJ-24]
Length = 196
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 99/191 (51%), Gaps = 7/191 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
QV S+VR E P LPE AL GRSNVGKSSL+N+L+ R+ A TS PGKTQ
Sbjct: 2 QVHNVNLTISAVRPEQYPDTKLPEVALAGRSNVGKSSLINTLINRRNYARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + I D Y VD+PGYGYA ++ R W + + YF R L L+DA
Sbjct: 62 LNFYNIEDLLYFVDVPGYGYAKVSQKEREKWARMIETYFSTRQELKGAISLVDARHEPSE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
+D + +L IP+ +V TK DK K K + E + +L + I+
Sbjct: 122 LDCQMIEFLHYYNIPVLVVGTKIDKIPKSKRN--KSESQIRKKLQLTKN-----DRLILF 174
Query: 284 SSVTNQGRDEI 294
S+V G+DE+
Sbjct: 175 SAVDKTGKDEV 185
>gi|260771615|ref|ZP_05880535.1| GTP-binding protein EngB [Vibrio metschnikovii CIP 69.14]
gi|260613392|gb|EEX38591.1| GTP-binding protein EngB [Vibrio metschnikovii CIP 69.14]
Length = 218
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 90/153 (58%), Gaps = 3/153 (1%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
F+ S+ P+D E A GRSN GKSS LN L +K LA TSKTPG+TQ IN F++
Sbjct: 12 FITSAPDIRHLPADDGIEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 71
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
D ++VDLPGYG+A P E++ W K +Y RS+L + +L+D P K +D +
Sbjct: 72 TDGCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQQRSSLKGLVVLMDIRHPMKDLDQQLV 131
Query: 230 SWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEEN 262
W + IP+ ++ TK DK K+G ++ + N
Sbjct: 132 LWAVECAIPVQVLLTKADKL---KSGARKAQLN 161
>gi|71064836|ref|YP_263563.1| ribosome biogenesis GTP-binding protein YsxC [Psychrobacter
arcticus 273-4]
gi|71037821|gb|AAZ18129.1| cell division checkpoint GTPase YihA [Psychrobacter arcticus 273-4]
Length = 302
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 92/148 (62%), Gaps = 1/148 (0%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ Q EF+ S+ CP+D E A GRSN GKSS +N+L +++LA +SKTPG+TQ
Sbjct: 63 RIQQTEFMMSAPTFRLCPADIGLEVAFAGRSNAGKSSAINALTNQRQLARSSKTPGRTQM 122
Query: 164 INHFRINDS-WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAK 222
IN F + D+ LVDLPGYGYAA P E++ +W ++Y ++RS+L + L+ D P K
Sbjct: 123 INFFNVGDADRRLVDLPGYGYAAVPLEMKKEWQVELEEYLVSRSSLAGLVLMTDIRHPLK 182
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDKRK 250
D + W ++P+ ++ TK DK K
Sbjct: 183 FFDEQMLRWAKDGELPVHILLTKADKLK 210
>gi|350560181|ref|ZP_08929021.1| ribosome biogenesis GTP-binding protein YsxC [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349782449|gb|EGZ36732.1| ribosome biogenesis GTP-binding protein YsxC [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 216
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+AEFV + R + P D E A GRSN GKSS LN+L R+ LA +TPG+TQ IN
Sbjct: 7 EAEFVLGAGRLDQLPDDAGAEIAFAGRSNAGKSSALNTLCERRALARVGRTPGRTQEINV 66
Query: 167 FRIN--DSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
FR+ W LVDLPGYGYA R WD+ DY R +L + L++D P P+
Sbjct: 67 FRLPPLGRWRLVDLPGYGYAKVSARQRAHWDRLIGDYLRERRSLAGLVLIMDIRHPLTPL 126
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNG 255
D WL P+ ++ TK DK + + G
Sbjct: 127 DEAMLHWLEGRPRPLHVLLTKADKVSRSEAG 157
>gi|116627470|ref|YP_820089.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
thermophilus LMD-9]
gi|386086275|ref|YP_006002149.1| GTPase EngB [Streptococcus thermophilus ND03]
gi|386344274|ref|YP_006040438.1| GTP-binding protein EngB [Streptococcus thermophilus JIM 8232]
gi|387909367|ref|YP_006339673.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
thermophilus MN-ZLW-002]
gi|122267932|sp|Q03LM9.1|ENGB_STRTD RecName: Full=Probable GTP-binding protein EngB
gi|116100747|gb|ABJ65893.1| Predicted GTPase [Streptococcus thermophilus LMD-9]
gi|312277988|gb|ADQ62645.1| GTPase EngB [Streptococcus thermophilus ND03]
gi|339277735|emb|CCC19483.1| putative GTP-binding protein EngB [Streptococcus thermophilus JIM
8232]
gi|387574302|gb|AFJ83008.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
thermophilus MN-ZLW-002]
Length = 199
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 99/189 (52%), Gaps = 11/189 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
AE + S+ P D LPE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ +N
Sbjct: 11 NAEILLSAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSGKPGKTQLLNF 70
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
+ I+D VD+PGYGYA ++ R W K ++Y + R L V L+D D+
Sbjct: 71 YNIDDKLRFVDVPGYGYARVSKKARAKWGKMIEEYLVTRDNLRVVVSLVDLRHEPTQDDI 130
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQG--FFQTAPPWIMTS 284
+ +L +IP+ +V TK D K P N + +I+ F +I+ S
Sbjct: 131 QMYEFLKYYEIPVIVVATKAD---------KIPRGKWNKHESIIKKKLNFDKNDHFIVFS 181
Query: 285 SVTNQGRDE 293
SVT G DE
Sbjct: 182 SVTRDGYDE 190
>gi|169829417|ref|YP_001699575.1| GTP-binding protein [Lysinibacillus sphaericus C3-41]
gi|168993905|gb|ACA41445.1| Probable GTP-binding protein [Lysinibacillus sphaericus C3-41]
Length = 186
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 82/144 (56%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
V S+VR + P DGLPEFAL GRSNVGKSS +N ++ RK LA S PGKTQ +N ++I
Sbjct: 1 MVISAVRPDQYPEDGLPEFALAGRSNVGKSSFINRMIGRKALARISSKPGKTQTLNFYKI 60
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
+ + VD+PGYGYA + R W K + YF R L +V ++D P D
Sbjct: 61 EEQLFFVDVPGYGYAKVSKSEREAWGKMIERYFTGRQELKAVVQIVDLRHPPTADDRMMY 120
Query: 230 SWLGQNQIPMTLVFTKCDKRKKKK 253
+L IP ++ TK DK K K
Sbjct: 121 DFLKHYNIPCIVIATKADKIPKGK 144
>gi|333375151|ref|ZP_08466975.1| ribosome biogenesis GTP-binding protein YsxC [Kingella kingae ATCC
23330]
gi|332971568|gb|EGK10518.1| ribosome biogenesis GTP-binding protein YsxC [Kingella kingae ATCC
23330]
Length = 209
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 105/188 (55%), Gaps = 7/188 (3%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A+F + +D P D E A VGRSN GKSS +N+L +LA SKTPG+TQ IN F
Sbjct: 7 AQFFTTVNHLKDLP-DTQAEIAFVGRSNAGKSSAINTLCNHVRLAYVSKTPGRTQHINFF 65
Query: 168 RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
++ + ++VDLPGYGYA P +R W K DY R +L+ + L++DA P KP+D++
Sbjct: 66 KLANQHFMVDLPGYGYAQVPEAVRAHWVKLLGDYLQTRQSLLGLVLIMDARHPLKPLDIQ 125
Query: 228 YASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI-MTSSV 286
+ P+ ++ +K DK K + + L+ ++ ++ F + + + SS+
Sbjct: 126 MLDFFALTGRPVHILLSKSDKLSKNEQ-----IKTLSSVKKALKPFMERQTVSVQLFSSL 180
Query: 287 TNQGRDEI 294
QG DE+
Sbjct: 181 KKQGIDEV 188
>gi|239616939|ref|YP_002940261.1| ribosome biogenesis GTP-binding protein YsxC [Kosmotoga olearia TBF
19.5.1]
gi|259645901|sp|C5CEL1.1|ENGB_KOSOT RecName: Full=Probable GTP-binding protein EngB
gi|239505770|gb|ACR79257.1| small GTP-binding protein [Kosmotoga olearia TBF 19.5.1]
Length = 190
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 107/196 (54%), Gaps = 18/196 (9%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ + E VK++ + D P E A GRSNVGKS+LLN+L +RK LA TS PGKT+ I
Sbjct: 3 IKKVELVKTAFKPGDYPEPVKREVAFAGRSNVGKSTLLNTLFQRK-LAHTSSKPGKTRSI 61
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + +N +Y VDLPGYG+A+A ++ W + +DYF R L V +L+D+ P +
Sbjct: 62 NFYLVNSKYYFVDLPGYGFASASKQELARWKELIEDYFSTRDNLNLVTILMDSRHPMQKN 121
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF-----FQTAPP 279
D + W+ IP +V TK DK N+ +++IQ + +PP
Sbjct: 122 DYKMLEWIKDYSIPFIVVLTKTDKLSG------------NELKKMIQIYEKELKLWGSPP 169
Query: 280 WIMTSSVTNQGRDEIL 295
I S+ T +G +E+L
Sbjct: 170 IIPFSAKTRRGLNELL 185
>gi|126728215|ref|ZP_01744031.1| GTP-binding protein [Sagittula stellata E-37]
gi|126711180|gb|EBA10230.1| GTP-binding protein [Sagittula stellata E-37]
Length = 216
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 97/191 (50%), Gaps = 5/191 (2%)
Query: 100 ARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPG 159
AR V + +F+K V + P D E GRSNVGKSSL+N+L RK LA S TPG
Sbjct: 19 ARKLFVGEVDFLKGVVAMDGLPPDDRAEVCFAGRSNVGKSSLINALTGRKGLARASNTPG 78
Query: 160 KTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASI 219
+TQ IN+F + YLVDLPGYG+A AP + W K Y R +L F+LID
Sbjct: 79 RTQEINYFTLGSERYLVDLPGYGFANAPVAVVAKWQALLKAYLAGRVSLRRAFVLIDHRH 138
Query: 220 PAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPP 279
K +D E + L ++ + +V TK DK K G ++ L + + P
Sbjct: 139 GVKAVDNEIMTLLDRSAVTFQVVMTKADKVK-----GAEHDKILEQVRGQLAKHPAAYPE 193
Query: 280 WIMTSSVTNQG 290
++TSS G
Sbjct: 194 IVVTSSEKGDG 204
>gi|378765068|ref|YP_005193527.1| ribosome biogenesis GTP-binding protein YsxC [Pantoea ananatis LMG
5342]
gi|386077331|ref|YP_005990856.1| GTP-binding protein EngB [Pantoea ananatis PA13]
gi|354986512|gb|AER30636.1| GTP-binding protein EngB [Pantoea ananatis PA13]
gi|365184540|emb|CCF07490.1| ribosome biogenesis GTP-binding protein YsxC [Pantoea ananatis LMG
5342]
Length = 246
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 89/154 (57%), Gaps = 3/154 (1%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
F+ S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN F +
Sbjct: 46 FILSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 105
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
+ LVDLPGYGYA P E++ W + +Y R L + +L+D P K +D +
Sbjct: 106 AEGKRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRQALKGLVILMDIRHPLKDLDQQMI 165
Query: 230 SWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENL 263
W +++IP+ L+ TK DK +G ++ + N+
Sbjct: 166 QWAVESEIPVLLLLTKADKL---ASGARKAQLNM 196
>gi|344338736|ref|ZP_08769667.1| GTP-binding protein engB [Thiocapsa marina 5811]
gi|343801318|gb|EGV19261.1| GTP-binding protein engB [Thiocapsa marina 5811]
Length = 214
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 87/144 (60%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+A F+ ++ R + CP+D E A GRSN GKSS +N+L + LA TSKTPG+TQ +
Sbjct: 7 RAHFLTAAARVDQCPADEGREVAFAGRSNAGKSSAINALCHQNALARTSKTPGRTQQLIF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F+++++ LVDLPGYGYA P ++ DW + Y RS+L + +++D P D
Sbjct: 67 FQLDETRRLVDLPGYGYAKVPDSVKRDWQQHMAAYLEQRSSLGGLVVVMDIRHPLAEFDR 126
Query: 227 EYASWLGQNQIPMTLVFTKCDKRK 250
+ W G+ +PM ++ TK DK K
Sbjct: 127 QMLHWGGRADLPMLVLLTKADKLK 150
>gi|299822780|ref|ZP_07054666.1| ribosome biogenesis GTP-binding protein YsxC [Listeria grayi DSM
20601]
gi|299816309|gb|EFI83547.1| ribosome biogenesis GTP-binding protein YsxC [Listeria grayi DSM
20601]
Length = 195
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 103/201 (51%), Gaps = 11/201 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V E V S+V E P GLPEFAL GRSNVGKSS +N+++ RK +A S PGKTQ +
Sbjct: 3 VNNVELVISAVWQEQYPEGGLPEFALAGRSNVGKSSFINTMIGRKSMARISSKPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + I D+ + VD+PGYG+A ++ R W + + Y +R L +V +ID
Sbjct: 63 NFYNIEDTLFFVDVPGYGFAKVSKKEREKWGEMIETYITSREPLRAVVQIIDLRHKPTKD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D+ +L IP+ ++ TK DK R K K +E L+ F ++
Sbjct: 123 DVMMYEFLKYYDIPVIIIATKADKIPRSKWYKNAKVVKETLD---------FDANDKLVL 173
Query: 283 TSSVTNQGRDEILLHMAQLRN 303
SS T G++E H+ N
Sbjct: 174 FSSETKMGKEEAWQHIESFLN 194
>gi|336450404|ref|ZP_08620855.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Idiomarina sp.
A28L]
gi|336282799|gb|EGN76020.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Idiomarina sp.
A28L]
Length = 213
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 104/200 (52%), Gaps = 10/200 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+A F S+ P D E A GRSN GKSS LN L R+K LA TSKTPG+TQ IN
Sbjct: 10 KAHFTISAPDIRHLPPDEGMEVAFAGRSNAGKSSALNVLTRQKSLARTSKTPGRTQQINV 69
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F ++D L+DLPGYG+A P ++ W + +Y R L + +L+D P K +D
Sbjct: 70 FALDDHRRLIDLPGYGFAQVPLAMKLKWQEALSEYLEKRKCLRGLVVLMDVRHPMKDLDQ 129
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSV 286
E W + +P+ +V TK DK + G+R +E L QE I GF I+ SS+
Sbjct: 130 ELIHWAVASDLPVLVVLTKIDKLR----SGQR-KEALMQIQEAIPGFGGDVSV-ILFSSL 183
Query: 287 TNQGRDEILLHMAQLRNYWL 306
G E + Q +YW
Sbjct: 184 NKSGLPE----LEQKLHYWF 199
>gi|258544865|ref|ZP_05705099.1| ribosome biogenesis GTP-binding protein YsxC [Cardiobacterium
hominis ATCC 15826]
gi|258519888|gb|EEV88747.1| ribosome biogenesis GTP-binding protein YsxC [Cardiobacterium
hominis ATCC 15826]
Length = 204
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 85/150 (56%), Gaps = 1/150 (0%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA F S+ R + +D E A GRSN GKSS LN+L +K LA S+TPG+TQ IN+
Sbjct: 7 QASFAFSANREDQLAADARIEIAFAGRSNAGKSSALNTLTNQKALARVSRTPGRTQLINY 66
Query: 167 FRINDS-WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPID 225
F + ++ YLVDLPGYGYA P ++R W Y L R+ L + LL+D P K +D
Sbjct: 67 FALPEAGCYLVDLPGYGYAEVPEQMRAHWQALLGRYLLTRAVLRGIVLLMDIRHPMKDLD 126
Query: 226 LEYASWLGQNQIPMTLVFTKCDKRKKKKNG 255
+ + Q+P ++ TK DK + G
Sbjct: 127 IRMLECCAERQLPAHILLTKADKLSRGAAG 156
>gi|381400873|ref|ZP_09925792.1| GTP-binding protein YsxC [Kingella kingae PYKK081]
gi|380834157|gb|EIC14006.1| GTP-binding protein YsxC [Kingella kingae PYKK081]
Length = 209
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 105/188 (55%), Gaps = 7/188 (3%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A+F + +D P D E A VGRSN GKSS +N+L +LA SKTPG+TQ IN F
Sbjct: 7 AQFFTTVNHLKDLP-DTQAEIAFVGRSNTGKSSAINTLCNHVRLAYVSKTPGRTQHINFF 65
Query: 168 RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
++ + ++VDLPGYGYA P +R W K DY R +L+ + L++DA P KP+D++
Sbjct: 66 KLANQHFMVDLPGYGYAQVPEAVRAHWVKLLGDYLQTRQSLLGLVLIMDARHPLKPLDIQ 125
Query: 228 YASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI-MTSSV 286
+ P+ ++ +K DK K + + L+ ++ ++ F + + + SS+
Sbjct: 126 MLDFFALTGRPVHILLSKSDKLSKNEQ-----IKTLSSVKKALKPFMERQTVSVQLFSSL 180
Query: 287 TNQGRDEI 294
QG DE+
Sbjct: 181 KKQGIDEV 188
>gi|387770409|ref|ZP_10126589.1| ribosome biogenesis GTP-binding protein YsxC [Pasteurella bettyae
CCUG 2042]
gi|386904220|gb|EIJ69016.1| ribosome biogenesis GTP-binding protein YsxC [Pasteurella bettyae
CCUG 2042]
Length = 205
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 81/139 (58%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
F+ S+ + P D E A GRSN GKS+ LN+L +K LA TSKTPG+TQ IN F +
Sbjct: 13 FMTSAAKINQLPEDSGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 72
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
LVDLPGYGYAA P +++ W K +Y +R L V +L+D P K +D +
Sbjct: 73 EPQCKLVDLPGYGYAAVPEQMKLQWQKSLGEYLQHRECLQGVVILMDIRHPLKDLDQQMI 132
Query: 230 SWLGQNQIPMTLVFTKCDK 248
W + +P+ L+ TK DK
Sbjct: 133 EWSVSSNLPILLLLTKSDK 151
>gi|315641096|ref|ZP_07896175.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus italicus
DSM 15952]
gi|315483104|gb|EFU73621.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus italicus
DSM 15952]
Length = 222
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 100/192 (52%), Gaps = 11/192 (5%)
Query: 102 DAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
+ +V A+ V S+V P LPE AL GRSNVGKSS +N+L+ RK LA TS PGKT
Sbjct: 25 NMKVHHADIVISAVSPAQYPESELPEIALAGRSNVGKSSFINTLIERKNLARTSSKPGKT 84
Query: 162 QCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPA 221
Q +N + I D + VD+PGYGYA + R W K + Y RS L +V L+D
Sbjct: 85 QTLNFYNIEDVLHFVDVPGYGYAKVSKTERAKWGKMIETYLTQRSQLKAVVSLVDFRHEP 144
Query: 222 KPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPP 279
D++ +L IP+ +V TK D K P N + +I+ F+
Sbjct: 145 SVEDVQMYQFLKYYDIPVIVVATKID---------KIPRGKWNKHESMIKKAMTFEKEDT 195
Query: 280 WIMTSSVTNQGR 291
+I+ SSVT G+
Sbjct: 196 FILFSSVTKDGK 207
>gi|227890606|ref|ZP_04008411.1| GTPase [Lactobacillus salivarius ATCC 11741]
gi|417788065|ref|ZP_12435748.1| GTP-binding protein EngB [Lactobacillus salivarius NIAS840]
gi|227867544|gb|EEJ74965.1| GTPase [Lactobacillus salivarius ATCC 11741]
gi|334308242|gb|EGL99228.1| GTP-binding protein EngB [Lactobacillus salivarius NIAS840]
Length = 196
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 99/191 (51%), Gaps = 7/191 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
QV S+VR E P LPE AL GRSNVGKSSL+N+L+ R+ A TS PGKTQ
Sbjct: 2 QVHNVNLTISAVRPEQYPDAKLPEVALAGRSNVGKSSLINTLINRRNYARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + I D Y VD+PGYGYA ++ R W + + YF R L L+DA
Sbjct: 62 LNFYNIEDLLYFVDVPGYGYAKVSQKEREKWARMIETYFSTRQELKGAISLVDARHEPSE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
+D + +L IP+ +V TK DK K K + E + +L + I+
Sbjct: 122 LDCQMIEFLHYYNIPVLVVGTKIDKIPKSKRN--KSESQIRKKLQLTKN-----DRLILF 174
Query: 284 SSVTNQGRDEI 294
S+V G+DE+
Sbjct: 175 SAVDKTGKDEV 185
>gi|377831393|ref|ZP_09814370.1| GTPase [Lactobacillus mucosae LM1]
gi|377554820|gb|EHT16522.1| GTPase [Lactobacillus mucosae LM1]
Length = 196
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 95/191 (49%), Gaps = 8/191 (4%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V + S+V E P PE ALVGRSNVGKSSL N L+ RK A TS PGKTQ
Sbjct: 2 EVHHVDLTISAVAEEQYPKTDYPEIALVGRSNVGKSSLTNVLINRKNFAHTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + + D + VD+PGYGYA ++ R + K + Y R L V L+DA
Sbjct: 62 LNFYNVEDQLFFVDVPGYGYAKVSKKQREKFGKMIETYLTTRPQLKGVIELVDARHAPSD 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D+ WL Q+P+ +V TK DK K P ++ + T P +
Sbjct: 122 DDVAMYQWLKYYQVPLLVVGTKIDKVK--------PSARTKSISQITKTLGMTDTPLQLF 173
Query: 284 SSVTNQGRDEI 294
S+ T G+DE+
Sbjct: 174 SAETKFGKDEV 184
>gi|317050145|ref|YP_004117793.1| ribosome biogenesis GTP-binding protein YsxC [Pantoea sp. At-9b]
gi|316951762|gb|ADU71237.1| ribosome biogenesis GTP-binding protein YsxC [Pantoea sp. At-9b]
Length = 213
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 101/186 (54%), Gaps = 8/186 (4%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN F +
Sbjct: 11 FVLSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
+ LVDLPGYGYA P E++ W + +Y R L + +L+D P K +D +
Sbjct: 71 VEGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLQKRQALKGLVVLMDIRHPLKDLDQQMI 130
Query: 230 SWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQEL-IQGFFQTAPPWIMTSSVTN 288
W Q++IP+ ++ TK DK +G ++ + N+ L QG Q M SS+
Sbjct: 131 EWAVQSEIPVLVLLTKADKL---ASGARKAQLNMVREASLAFQGDVQVE----MFSSLKK 183
Query: 289 QGRDEI 294
G D++
Sbjct: 184 LGVDKL 189
>gi|393770889|ref|ZP_10359365.1| ribosome biogenesis GTP-binding protein YsxC [Novosphingobium sp.
Rr 2-17]
gi|392723545|gb|EIZ80934.1| ribosome biogenesis GTP-binding protein YsxC [Novosphingobium sp.
Rr 2-17]
Length = 214
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 94/159 (59%), Gaps = 2/159 (1%)
Query: 94 IVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLAL 153
I L++ AR F+KS+ + P+ +PE AL GRSNVGKSSLLN++V RK +A
Sbjct: 7 IELTERARKLFAGPVAFLKSAPELKFLPNPDVPEIALSGRSNVGKSSLLNAIVGRKAIAR 66
Query: 154 TSKTPGKTQCINHFRIND--SWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSV 211
TS TPG+TQ +N F + + + LVD+PGYG+A AP ++ W + +DY R L
Sbjct: 67 TSVTPGRTQELNFFDVGEPLKFRLVDMPGYGFAKAPPKVVEQWRRLVRDYLRGRVELKRT 126
Query: 212 FLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRK 250
+L+DA KP+D+E L + + +V TK DK K
Sbjct: 127 LVLVDARHGVKPVDVEMMKMLDEAAVGYRVVLTKADKIK 165
>gi|300714615|ref|YP_003739418.1| GTP-binding protein EngB [Erwinia billingiae Eb661]
gi|299060451|emb|CAX57558.1| Probable GTP-binding protein EngB [Erwinia billingiae Eb661]
Length = 214
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 95/165 (57%), Gaps = 5/165 (3%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
FV S+ P+D E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN F++
Sbjct: 11 FVTSAPDIRHLPADTGLEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFQV 70
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
+ + LVDLPGYGYA P E++ W + +Y +R L + +L+D P K +D +
Sbjct: 71 AEGYRLVDLPGYGYAEVPEEMKLKWQRALAEYLRDRQCLKGLVVLMDIRHPLKDLDQQMI 130
Query: 230 SWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFF 274
W Q+ I + ++ TK DK +G ++ + LN +E +GF
Sbjct: 131 LWAVQSGIQVLVLLTKADKL---ASGARKAQ--LNAVRETAKGFI 170
>gi|389572048|ref|ZP_10162136.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus sp. M 2-6]
gi|388428534|gb|EIL86331.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus sp. M 2-6]
Length = 195
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 103/192 (53%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +++ V S+V+ E PS GLPE AL GRSNVGKSS +NSL+ RK LA TS PGKTQ
Sbjct: 2 KVTKSDIVISAVKPEQYPSGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IND + VD+PGYG+A + R W + + Y R L +V ++D
Sbjct: 62 LNFYIINDMLHFVDVPGYGFAKVSKTEREAWGRMIETYITMREELKAVVQIVDLRHKPSA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPP--WI 281
D+ +L +P+ ++ TK D K P+ ++++ P I
Sbjct: 122 DDVNMYEFLKYYGVPVIIIATKAD---------KIPKGKWEKHAKVVKQTLDIDPSDELI 172
Query: 282 MTSSVTNQGRDE 293
+ SS T +G+DE
Sbjct: 173 LFSSETKKGKDE 184
>gi|386017734|ref|YP_005936033.1| GTP-binding protein EngB [Pantoea ananatis AJ13355]
gi|327395815|dbj|BAK13237.1| probable GTP-binding protein EngB [Pantoea ananatis AJ13355]
Length = 246
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 89/154 (57%), Gaps = 3/154 (1%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
F+ S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN F +
Sbjct: 46 FILSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 105
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
+ LVDLPGYGYA P E++ W + +Y R L + +L+D P K +D +
Sbjct: 106 AEGKRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRQALKGLVVLMDIRHPLKDLDQQMI 165
Query: 230 SWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENL 263
W +++IP+ L+ TK DK +G ++ + N+
Sbjct: 166 QWAVESEIPVLLLLTKADKL---ASGARKAQLNM 196
>gi|404379814|ref|ZP_10984863.1| ribosome biogenesis GTP-binding protein YsxC [Simonsiella muelleri
ATCC 29453]
gi|294484328|gb|EFG32011.1| ribosome biogenesis GTP-binding protein YsxC [Simonsiella muelleri
ATCC 29453]
Length = 210
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 85/146 (58%), Gaps = 1/146 (0%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A F + +D P D E A VGRSN GKSS +N+L +LA SKTPG+TQ IN F
Sbjct: 7 ARFFTTVNHLKDLP-DTPAEIAFVGRSNAGKSSAINTLCNHVRLAYVSKTPGRTQHINFF 65
Query: 168 RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
+ + ++VDLPGYGYA P +RT W K DY R L+ + L++DA P KP+D++
Sbjct: 66 ELTNGHFMVDLPGYGYAQVPEAIRTHWVKLLGDYLQTRRQLIGLVLIMDARHPLKPLDIQ 125
Query: 228 YASWLGQNQIPMTLVFTKCDKRKKKK 253
+ + P+ ++ +K DK K +
Sbjct: 126 MLDFFALTEKPVHILLSKADKLSKNE 151
>gi|385265702|ref|ZP_10043789.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus sp. 5B6]
gi|452856472|ref|YP_007498155.1| GTPase involved in ribosome 50S subunit assembly [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|385150198|gb|EIF14135.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus sp. 5B6]
gi|452080732|emb|CCP22497.1| GTPase involved in ribosome 50S subunit assembly [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 195
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 103/192 (53%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V ++E V S+V+ E P+ GLPE AL GRSNVGKSS +NSL+ RK LA TS PGKTQ
Sbjct: 2 KVTKSEIVISAVKPEQYPNGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IND + VD+PGYG+A + R W + + Y R L + ++D
Sbjct: 62 LNFYIINDELHFVDVPGYGFAKVSKSEREAWGRMIETYMTTREELKACVQIVDLRHAPSA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP--PWI 281
D+ +L IP+ ++ TK D K P+ + ++++ P I
Sbjct: 122 EDVNMYEFLKYYGIPVIVIATKAD---------KIPKGKWDKHLKVVKQTLDMDPEDELI 172
Query: 282 MTSSVTNQGRDE 293
+ SS T +G+DE
Sbjct: 173 LFSSETKKGKDE 184
>gi|332289351|ref|YP_004420203.1| ribosome biogenesis GTP-binding protein YsxC [Gallibacterium anatis
UMN179]
gi|330432247|gb|AEC17306.1| ribosome biogenesis GTP-binding protein YsxC [Gallibacterium anatis
UMN179]
Length = 204
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 82/139 (58%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
FV S+ P+D E A GRSN GKS+ LN+L +K LA TSKTPG+TQ IN F +
Sbjct: 13 FVMSAANIRQLPADAGVEVAFAGRSNAGKSTALNTLANQKNLAKTSKTPGRTQLINLFEV 72
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
+++ ++DLPGYGYAA P +++ W K +Y R L V +L+D P K +D +
Sbjct: 73 SENCKIIDLPGYGYAAVPEKVKLQWQKSLGEYLQQRQCLGGVVILMDIRHPLKDLDQQMI 132
Query: 230 SWLGQNQIPMTLVFTKCDK 248
W +P+ L+ TK DK
Sbjct: 133 EWAVSADLPILLLLTKADK 151
>gi|13124224|sp|Q9PDE9.2|ENGB_XYLFA RecName: Full=Probable GTP-binding protein EngB
Length = 203
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 83/141 (58%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A+++ S+ T P+D E A GRSN GKSS+LN+L R+ LA SKTPG+TQ + +F
Sbjct: 8 AKYLLSAHTTHQLPADDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYF 67
Query: 168 RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
+ YLVDLPGYGYA P+EL+ W F YF R L + +++D P K DL+
Sbjct: 68 TVTPQRYLVDLPGYGYAKVPKELQIHWQTFIDSYFHQRQALRGLVVVMDIRHPLKEYDLQ 127
Query: 228 YASWLGQNQIPMTLVFTKCDK 248
++ Q +P + TK DK
Sbjct: 128 MLAYARQRGLPAQALLTKADK 148
>gi|93005116|ref|YP_579553.1| ribosome biogenesis GTP-binding protein YsxC [Psychrobacter
cryohalolentis K5]
gi|92392794|gb|ABE74069.1| cell division checkpoint GTPase YihA [Psychrobacter cryohalolentis
K5]
Length = 256
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 92/148 (62%), Gaps = 1/148 (0%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ Q EF+ S+ CP+D E A GRSN GKSS +N+L +++LA +SKTPG+TQ
Sbjct: 22 RIQQTEFMMSAPTFRLCPADIGLEVAFAGRSNAGKSSAINALTNQRQLARSSKTPGRTQM 81
Query: 164 INHFRINDS-WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAK 222
IN F + D+ LVDLPGYGYAA P E++ +W ++Y ++RS+L + L+ D P K
Sbjct: 82 INFFNVGDADRRLVDLPGYGYAAVPLEMKKEWQVELEEYLVSRSSLAGLVLMSDIRHPLK 141
Query: 223 PIDLEYASWLGQNQIPMTLVFTKCDKRK 250
D + W ++P+ ++ TK DK K
Sbjct: 142 FFDEQMLRWAKDGELPVHILLTKADKLK 169
>gi|417935771|ref|ZP_12579088.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis X]
gi|343402680|gb|EGV15185.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis X]
Length = 195
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 101/189 (53%), Gaps = 11/189 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
AE + S+ P D LPE AL GRSNVGKSS +N+++ RK LA TS PGKTQ +N
Sbjct: 7 NAEILLSAANKSHYPQDKLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I+D VD+PGYGYA ++ R W + ++Y R L +V L+D D+
Sbjct: 67 FNIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDV 126
Query: 227 EYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
+ +L +IP+ +V TK DK R K ++ LN F + +I+ S
Sbjct: 127 QMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLN---------FDPSDDFILFS 177
Query: 285 SVTNQGRDE 293
SVT +G D+
Sbjct: 178 SVTKEGMDQ 186
>gi|397905709|ref|ZP_10506551.1| GTP-binding protein EngB [Caloramator australicus RC3]
gi|397161228|emb|CCJ33886.1| GTP-binding protein EngB [Caloramator australicus RC3]
Length = 193
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 88/145 (60%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ +AE K +V P+ G PE AL GRSNVGKSSL+N+LV K LA TS +PGKT+
Sbjct: 2 KIKKAELEKVAVFPYQYPNTGRPEIALAGRSNVGKSSLINTLVNIKSLARTSSSPGKTRT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F INDS+YLVDLPGYGYA +E + W K +DY R L + LL+D+
Sbjct: 62 INFFNINDSFYLVDLPGYGYAKVSKEEKKKWGKMIEDYLNGREELKLIALLVDSRHAPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK 248
D +++ + + ++ TK DK
Sbjct: 122 DDKLMLNFIRHSGKKLVVIATKIDK 146
>gi|192361932|ref|YP_001983930.1| putative GTPase [Cellvibrio japonicus Ueda107]
gi|190688097|gb|ACE85775.1| putative GTPase, involved in coordination of cell cycle (EngB)
[Cellvibrio japonicus Ueda107]
Length = 219
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Query: 106 AQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCIN 165
+A F+ S+ CP + E A GRSN GKSS +N+L +LA TSKTPG+TQ IN
Sbjct: 8 GKARFLTSAPSIRQCPPETGREVAFAGRSNAGKSSAINALTNNHRLARTSKTPGRTQLIN 67
Query: 166 HFRINDSWY-LVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
F + D Y LVDLPGYGYA REL+ W + +Y R TL + LL+D P +
Sbjct: 68 FFTLGDEAYRLVDLPGYGYAKVSRELKEQWQRDLSEYLERRKTLQGLVLLMDIRHPLQEF 127
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK 248
D W Q Q+P+ ++ TK DK
Sbjct: 128 DSAILHWAMQGQMPVHILLTKADK 151
>gi|110598119|ref|ZP_01386397.1| GTP-binding [Chlorobium ferrooxidans DSM 13031]
gi|110340251|gb|EAT58748.1| GTP-binding [Chlorobium ferrooxidans DSM 13031]
Length = 202
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 100/195 (51%), Gaps = 9/195 (4%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A F S P + PE GRSNVGKS+LLNSL K LA TS TPGKT+
Sbjct: 12 KITSAAFHISVSALSGLPEESTPEIVFAGRSNVGKSTLLNSLTGLKALAKTSSTPGKTRL 71
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN+F IN +Y VDLPGYGYAA +E + W Y R ++ V LL D+ PA
Sbjct: 72 INYFLINQEFYFVDLPGYGYAAVGQEQKAAWGHLLSSYIEERQSISLVVLLFDSRHPAME 131
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D ++L ++ P +V TK DK +K+ R +++ A +
Sbjct: 132 SDRAMINFLEFHERPYGIVLTKFDKLTQKEMAKTR---------RIMESCAAKAKFIVNY 182
Query: 284 SSVTNQGRDEILLHM 298
SS + +G+ E+L H+
Sbjct: 183 SSFSGKGKSELLAHL 197
>gi|291619507|ref|YP_003522249.1| EngB [Pantoea ananatis LMG 20103]
gi|291154537|gb|ADD79121.1| EngB [Pantoea ananatis LMG 20103]
Length = 246
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 89/154 (57%), Gaps = 3/154 (1%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
F+ S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN F +
Sbjct: 46 FILSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 105
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
+ LVDLPGYGYA P E++ W + +Y R L + +L+D P K +D +
Sbjct: 106 AEGKRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRQALKGLVVLMDIRHPLKDLDQQMI 165
Query: 230 SWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENL 263
W +++IP+ L+ TK DK +G ++ + N+
Sbjct: 166 QWAVESEIPVLLLLTKADKL---ASGARKAQLNM 196
>gi|372487981|ref|YP_005027546.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Dechlorosoma
suillum PS]
gi|359354534|gb|AEV25705.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Dechlorosoma
suillum PS]
Length = 252
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 81/142 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+A F+ + D P D L E A GRSN GKSS +N+L +LA SKTPG+TQ +N
Sbjct: 6 KAVFLTTVAHLRDLPEDALAEVAFAGRSNAGKSSAINTLANHTRLAFVSKTPGRTQHLNF 65
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F++ + +LVDLPGYGYA AP E+R+ W+ Y +R L + L++D+ P +D
Sbjct: 66 FKLEEGKFLVDLPGYGYAKAPEEIRSQWEGLLGPYLQHRGPLSGLVLIMDSRHPLTELDQ 125
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
W P+ ++ +K DK
Sbjct: 126 NLIDWFAATGKPLHIMLSKADK 147
>gi|430841435|ref|ZP_19459354.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1007]
gi|431071688|ref|ZP_19494659.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1604]
gi|430494211|gb|ELA70461.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1007]
gi|430567321|gb|ELB06407.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1604]
Length = 195
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 101/192 (52%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V QAE + S+V + P LPE AL GRSNVGKSS +N+L+ RK LA S PGKTQ
Sbjct: 2 KVHQAEIIISAVSPKQYPETQLPEIALAGRSNVGKSSFINTLIDRKNLARISGKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + I ++ + VD+PGYGYA + R W K + Y R L +V L+D
Sbjct: 62 LNFYLIENALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTREQLRAVVSLVDLRHKPSQ 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWI 281
D++ +L IP+ +V TK D K P N + I+ F +I
Sbjct: 122 EDIQMYQFLKYYDIPVIVVATKAD---------KIPRGKWNKHESEIKKALDFDHNDTFI 172
Query: 282 MTSSVTNQGRDE 293
+ SSVT QG++E
Sbjct: 173 LFSSVTKQGKEE 184
>gi|15838031|ref|NP_298719.1| ribosome biogenesis GTP-binding protein YsxC [Xylella fastidiosa
9a5c]
gi|9106445|gb|AAF84239.1|AE003973_7 GTP-binding protein [Xylella fastidiosa 9a5c]
Length = 229
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 83/141 (58%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A+++ S+ T P+D E A GRSN GKSS+LN+L R+ LA SKTPG+TQ + +F
Sbjct: 34 AKYLLSAHTTHQLPADDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYF 93
Query: 168 RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
+ YLVDLPGYGYA P+EL+ W F YF R L + +++D P K DL+
Sbjct: 94 TVTPQRYLVDLPGYGYAKVPKELQIHWQTFIDSYFHQRQALRGLVVVMDIRHPLKEYDLQ 153
Query: 228 YASWLGQNQIPMTLVFTKCDK 248
++ Q +P + TK DK
Sbjct: 154 MLAYARQRGLPAQALLTKADK 174
>gi|330831500|ref|YP_004394452.1| GTPase EngB [Aeromonas veronii B565]
gi|328806636|gb|AEB51835.1| GTPase EngB [Aeromonas veronii B565]
Length = 205
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 76/129 (58%)
Query: 120 CPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLP 179
P+DG E A GRSN GKSS LN+L + K LA TSKTPG+TQ IN F + LVDLP
Sbjct: 10 LPNDGGVEIAFAGRSNAGKSSALNTLTKHKNLARTSKTPGRTQLINLFELEPGKRLVDLP 69
Query: 180 GYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPM 239
GYGYA P E++ W K +Y R +L + +L+D P K D+ W Q+P+
Sbjct: 70 GYGYAQVPLEMKLKWQKSLAEYLQRRESLKGLVILMDIRHPLKDTDMNMLEWSSHRQLPV 129
Query: 240 TLVFTKCDK 248
L+ TK DK
Sbjct: 130 MLLLTKADK 138
>gi|289577857|ref|YP_003476484.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
italicus Ab9]
gi|289527570|gb|ADD01922.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
italicus Ab9]
Length = 192
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 84/148 (56%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ EF KS+ E P D LP+ + GRSNVGKS+L+N+++ RK LA TS PGKT+
Sbjct: 2 KIKTVEFTKSAFNEEQYPKDDLPQIVIAGRSNVGKSTLINTVLNRKNLAKTSSRPGKTRG 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN + IN+ +YLVDLPGYGYA +E++ W + + L LLID
Sbjct: 62 INFYLINNKFYLVDLPGYGYAKVSKEMKNQWAHNIETFLNTSRNLRHGLLLIDIRRVPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKK 251
DL +W +P T+V TK DK K
Sbjct: 122 DDLLMINWFKYKNLPFTVVLTKADKVNK 149
>gi|116333988|ref|YP_795515.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus brevis
ATCC 367]
gi|122269328|sp|Q03QN8.1|ENGB_LACBA RecName: Full=Probable GTP-binding protein EngB
gi|116099335|gb|ABJ64484.1| Predicted GTPase [Lactobacillus brevis ATCC 367]
Length = 197
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 81/150 (54%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V E V S+V P+ G PE ALVGRSNVGKSSL N L+ R A TS PGKTQ
Sbjct: 2 EVNHVELVMSAVDPAQYPTTGYPEIALVGRSNVGKSSLTNVLINRNSYARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + + D Y VD+PGYGYA + R W + + Y R L V L+DA
Sbjct: 62 LNFYNVEDQLYFVDVPGYGYAKVSKTEREKWGQMIETYLTQRDQLRGVISLVDARHAPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D++ WL ++P +V TK DK + K
Sbjct: 122 DDIQMYRWLAYYELPTLIVATKSDKIARGK 151
>gi|389578832|ref|ZP_10168859.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Desulfobacter
postgatei 2ac9]
gi|389400467|gb|EIM62689.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Desulfobacter
postgatei 2ac9]
Length = 199
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 103/202 (50%), Gaps = 8/202 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ EF+KS+V+ P PE A GRSNVGKSSL+N+L+ RK + TS PG TQ
Sbjct: 2 KIRAVEFIKSAVKPAQYPEYDFPEIAFAGRSNVGKSSLINTLINRKDMVKTSSRPGCTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F IND LVDLPGYGYA +++R W + Y R L+ + LLID
Sbjct: 62 INFFLINDGLSLVDLPGYGYAKVSKKIRAQWQPMVETYMGTRKNLLGLILLIDIRRDPGK 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
+LE WL QIP LV TK DK K K L F F + ++
Sbjct: 122 EELEMVRWLETKQIPCLLVLTKADKLSKTK--------QLKQFDAACTAFNRDRNGIVLF 173
Query: 284 SSVTNQGRDEILLHMAQLRNYW 305
S+ T QGR I + L +++
Sbjct: 174 SAKTRQGRQIIWDEIHNLIDWY 195
>gi|333902485|ref|YP_004476358.1| GTP-binding protein engB [Pseudomonas fulva 12-X]
gi|333117750|gb|AEF24264.1| GTP-binding protein engB [Pseudomonas fulva 12-X]
Length = 215
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 83/142 (58%), Gaps = 1/142 (0%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA F+ S+ + + CP D E A GRSN GKSS LN+L LA TSKTPG+TQ +N
Sbjct: 13 QATFLISAAKVDQCPDDQGYEVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNF 71
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
FR++D LVDLPGYGYA P L+ W K + Y +R +L + L++D P D
Sbjct: 72 FRLDDERRLVDLPGYGYAKVPIPLKQHWQKHLEAYLGSRESLRGLILMMDIRHPLTEFDR 131
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
W G + +PM ++ TK DK
Sbjct: 132 MMLDWSGASGMPMHILLTKADK 153
>gi|340001440|ref|YP_004732324.1| ATP/GTP-binding protein [Salmonella bongori NCTC 12419]
gi|339514802|emb|CCC32572.1| ATP/GTP-binding protein [Salmonella bongori NCTC 12419]
Length = 210
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 101/188 (53%), Gaps = 6/188 (3%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVMSAPDIRHLPSDSGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 68 FEVVDGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSV 286
+ W ++ I + ++ TK DK +G ++ + LN +E + F SS+
Sbjct: 128 QMIQWAVESNIQVLVLLTKADKL---ASGARKAQ--LNRVREAVLAFNGDVQVEAF-SSL 181
Query: 287 TNQGRDEI 294
QG D++
Sbjct: 182 KKQGVDKL 189
>gi|419707484|ref|ZP_14234968.1| Putative GTP-binding protein engB [Streptococcus salivarius PS4]
gi|383282830|gb|EIC80810.1| Putative GTP-binding protein engB [Streptococcus salivarius PS4]
Length = 199
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 99/189 (52%), Gaps = 11/189 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
AE + S+ P D LPE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ +N
Sbjct: 11 NAEILLSAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSGKPGKTQLLNF 70
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
+ I+D VD+PGYGYA ++ R W K ++Y + R L V L+D D+
Sbjct: 71 YNIDDKLRFVDVPGYGYARVSKKERAKWGKMIEEYLVTRDNLRVVVSLVDLRHEPTQDDI 130
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQG--FFQTAPPWIMTS 284
+ +L +IP+ +V TK D K P N + +I+ F +I+ S
Sbjct: 131 QMYEFLKYYEIPVIIVATKAD---------KIPRGKWNKHESVIKKKLNFDKNDHFIVFS 181
Query: 285 SVTNQGRDE 293
SVT G DE
Sbjct: 182 SVTRDGYDE 190
>gi|169832607|ref|YP_001694973.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae Hungary19A-6]
gi|238688373|sp|B1ICY8.1|ENGB_STRPI RecName: Full=Probable GTP-binding protein EngB
gi|168995109|gb|ACA35721.1| GTP-binding protein [Streptococcus pneumoniae Hungary19A-6]
Length = 195
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 101/189 (53%), Gaps = 11/189 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
AE + S+ P D LPE AL GRSNVGKSS +N+++ RK LA TS PGKTQ +N
Sbjct: 7 NAEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I+D VD+PGYGYA ++ R W + ++Y R L +V L+D D+
Sbjct: 67 FNIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDV 126
Query: 227 EYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
+ +L +IP+ +V TK DK R K ++ LN F + +I+ S
Sbjct: 127 QMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLN---------FDPSDDFILFS 177
Query: 285 SVTNQGRDE 293
SV+ +G DE
Sbjct: 178 SVSKEGMDE 186
>gi|119358159|ref|YP_912803.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium
phaeobacteroides DSM 266]
gi|166225950|sp|A1BJ02.1|ENGB_CHLPD RecName: Full=Probable GTP-binding protein EngB
gi|119355508|gb|ABL66379.1| GTP-binding protein, HSR1-related protein [Chlorobium
phaeobacteroides DSM 266]
Length = 192
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 107/201 (53%), Gaps = 17/201 (8%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ A F S+ P +PE GRSNVGKS+LLNSL K LA TS TPGKT+
Sbjct: 2 KITDAAFYISAAALSGLPDLQIPEIVFAGRSNVGKSTLLNSLAGIKGLAKTSSTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F +N +++ VDLPGYG+AA E W K Y RS + V LL+D+ PA
Sbjct: 62 INFFLVNKAFFFVDLPGYGFAAVGHEQHEAWKKLLTTYIERRSAITLVVLLVDSRHPAMQ 121
Query: 224 ID---LEYASWLGQNQIPMTLVFTKCDK-RKKKKNGGKRPEENLNDFQELIQGFFQTAPP 279
D ++Y ++LG+ P +V TK DK + ++ +R E+ E I +
Sbjct: 122 SDREMIDYLTYLGK---PYGIVLTKDDKLTQSQRIKARRVMESSALNAEFIVNY------ 172
Query: 280 WIMTSSVTNQGRDEILLHMAQ 300
SS +++ R E+L H+AQ
Sbjct: 173 ----SSFSSKARLELLAHLAQ 189
>gi|333369682|ref|ZP_08461788.1| ribosome biogenesis GTP-binding protein YsxC [Psychrobacter sp.
1501(2011)]
gi|332970221|gb|EGK09214.1| ribosome biogenesis GTP-binding protein YsxC [Psychrobacter sp.
1501(2011)]
Length = 234
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 119/218 (54%), Gaps = 21/218 (9%)
Query: 96 LSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTS 155
LS + ++ Q EF+ S+ + CP+D E A GRSN GKSS +N L +++LA +S
Sbjct: 24 LSHLSPRKRLEQTEFLMSAPTFKLCPADTGYEVAFAGRSNAGKSSAINVLTNQRQLARSS 83
Query: 156 KTPGKTQCINHFRI-NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLL 214
KTPG+TQ IN F I N+ LVDLPGYGYAA P +++ W ++Y ++R +L + LL
Sbjct: 84 KTPGRTQMINFFSIGNEEARLVDLPGYGYAAVPEKMKLVWQTELEEYLVSRESLAGLVLL 143
Query: 215 IDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKK--KKN---GGKRPEENLNDFQEL 269
+D+ P K D + W ++P+ ++ TK DK K KN KR E L D
Sbjct: 144 MDSRHPLKFFDEQMLHWAKDGELPVHVLLTKADKFKYGPAKNILLQTKRELEKL-DLPFS 202
Query: 270 IQGFFQTAPPWIMTSSVTNQGRDEILLHMAQLRNYWLK 307
IQ F SS+ +G DE+ A++ WL+
Sbjct: 203 IQLF----------SSLKKEGIDEL----AEVMGRWLR 226
>gi|150388895|ref|YP_001318944.1| ribosome biogenesis GTP-binding protein YsxC [Alkaliphilus
metalliredigens QYMF]
gi|166920106|sp|A6TM67.1|ENGB_ALKMQ RecName: Full=Probable GTP-binding protein EngB
gi|149948757|gb|ABR47285.1| GTP-binding protein, HSR1-related [Alkaliphilus metalliredigens
QYMF]
Length = 208
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 86/145 (59%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ ++ V S+V + P +GLPE AL GRSNVGKSSL+N+++ RKKLA S +PGKT+
Sbjct: 2 KIKTSDIVMSAVAPKQYPEEGLPEIALAGRSNVGKSSLINTILNRKKLARVSSSPGKTRT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IN ++LVDLPGYGYA + ++ W K + Y NR L V LLID
Sbjct: 62 LNFYLINKEFHLVDLPGYGYARVSKGEKSSWGKMLETYLSNRPNLYEVVLLIDIRHEPSE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK 248
D + W+ +V TK DK
Sbjct: 122 QDQQMYQWIRHYGYGTIVVATKSDK 146
>gi|90961519|ref|YP_535435.1| GTP-binding protein [Lactobacillus salivarius UCC118]
gi|385840235|ref|YP_005863559.1| GTP-binding protein engB [Lactobacillus salivarius CECT 5713]
gi|418961154|ref|ZP_13513041.1| GTP-binding protein [Lactobacillus salivarius SMXD51]
gi|119369208|sp|Q1WUI3.1|ENGB_LACS1 RecName: Full=Probable GTP-binding protein EngB
gi|90820713|gb|ABD99352.1| GTP-binding protein [Lactobacillus salivarius UCC118]
gi|300214356|gb|ADJ78772.1| Probable GTP-binding protein engB [Lactobacillus salivarius CECT
5713]
gi|380344821|gb|EIA33167.1| GTP-binding protein [Lactobacillus salivarius SMXD51]
Length = 196
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 99/191 (51%), Gaps = 7/191 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
QV S+VR E P LPE AL GRSNVGKSSL+N+L+ R+ A TS PGKTQ
Sbjct: 2 QVHNVNLTISAVRPEQYPDAKLPEVALAGRSNVGKSSLINTLINRRNYARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + I D Y VD+PGYGYA ++ R W + + YF R L L+DA
Sbjct: 62 LNFYNIEDLLYFVDVPGYGYAKVSQKEREKWARMIETYFSTRQELKGAISLVDARHEPSE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
+D + +L IP+ +V TK DK K K + E + +L + I+
Sbjct: 122 LDCQMIEFLHYYNIPVLVVGTKIDKIPKSKRN--KSESQIRKKLQLTKN-----DRLILF 174
Query: 284 SSVTNQGRDEI 294
S+V G+DE+
Sbjct: 175 SAVDKIGKDEV 185
>gi|55820661|ref|YP_139103.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
thermophilus LMG 18311]
gi|55822552|ref|YP_140993.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
thermophilus CNRZ1066]
gi|445373898|ref|ZP_21426336.1| GTP-binding protein YsxC [Streptococcus thermophilus MTCC 5460]
gi|445388795|ref|ZP_21428053.1| GTP-binding protein YsxC [Streptococcus thermophilus MTCC 5461]
gi|81820325|sp|Q5M0S3.1|ENGB_STRT1 RecName: Full=Probable GTP-binding protein EngB
gi|81820489|sp|Q5M5A9.1|ENGB_STRT2 RecName: Full=Probable GTP-binding protein EngB
gi|55736646|gb|AAV60288.1| GTP-binding protein [Streptococcus thermophilus LMG 18311]
gi|55738537|gb|AAV62178.1| GTP-binding protein [Streptococcus thermophilus CNRZ1066]
gi|444750543|gb|ELW75345.1| GTP-binding protein YsxC [Streptococcus thermophilus MTCC 5461]
gi|444750719|gb|ELW75512.1| GTP-binding protein YsxC [Streptococcus thermophilus MTCC 5460]
Length = 199
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 99/189 (52%), Gaps = 11/189 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
AE + S+ P D LPE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ +N
Sbjct: 11 NAEILLSAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSGKPGKTQLLNF 70
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
+ I+D VD+PGYGYA ++ R W K ++Y + R L V L+D D+
Sbjct: 71 YNIDDKLRFVDVPGYGYARVSKKERAKWGKMIEEYLVTRDNLRVVVSLVDLRHEPTQDDI 130
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQG--FFQTAPPWIMTS 284
+ +L +IP+ +V TK D K P N + +I+ F +I+ S
Sbjct: 131 QMYEFLKYYEIPVIVVATKAD---------KIPRGKWNKHESIIKKKLNFDKNDHFIVFS 181
Query: 285 SVTNQGRDE 293
SVT G DE
Sbjct: 182 SVTRDGYDE 190
>gi|228478240|ref|ZP_04062848.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
salivarius SK126]
gi|312863700|ref|ZP_07723938.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
vestibularis F0396]
gi|340399275|ref|YP_004728300.1| putative GTP-binding protein engB [Streptococcus salivarius CCHSS3]
gi|387761729|ref|YP_006068706.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
salivarius 57.I]
gi|387783675|ref|YP_006069758.1| putative GTP-binding protein engB [Streptococcus salivarius
JIM8777]
gi|418018248|ref|ZP_12657804.1| putative GTP-binding protein [Streptococcus salivarius M18]
gi|421451945|ref|ZP_15901306.1| GTP-binding protein YihA [Streptococcus salivarius K12]
gi|228249919|gb|EEK09189.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
salivarius SK126]
gi|311101236|gb|EFQ59441.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
vestibularis F0396]
gi|338743268|emb|CCB93776.1| putative GTP-binding protein engB [Streptococcus salivarius CCHSS3]
gi|338744557|emb|CCB94923.1| putative GTP-binding protein engB [Streptococcus salivarius
JIM8777]
gi|339292496|gb|AEJ53843.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
salivarius 57.I]
gi|345527097|gb|EGX30408.1| putative GTP-binding protein [Streptococcus salivarius M18]
gi|400182376|gb|EJO16638.1| GTP-binding protein YihA [Streptococcus salivarius K12]
Length = 199
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 99/189 (52%), Gaps = 11/189 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
AE + S+ P D LPE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ +N
Sbjct: 11 NAEILLSAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSGKPGKTQLLNF 70
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
+ I+D VD+PGYGYA ++ R W K ++Y + R L V L+D D+
Sbjct: 71 YNIDDKLRFVDVPGYGYARVSKKERAKWGKMIEEYLVTRDNLRVVVSLVDLRHEPTQDDI 130
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQG--FFQTAPPWIMTS 284
+ +L +IP+ +V TK D K P N + +I+ F +I+ S
Sbjct: 131 QMYEFLKYYEIPVIVVATKAD---------KIPRGKWNKHESIIKKKLNFDKNDHFIVFS 181
Query: 285 SVTNQGRDE 293
SVT G DE
Sbjct: 182 SVTRDGYDE 190
>gi|160893845|ref|ZP_02074628.1| hypothetical protein CLOL250_01399 [Clostridium sp. L2-50]
gi|156864497|gb|EDO57928.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium sp.
L2-50]
Length = 201
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 98/191 (51%), Gaps = 7/191 (3%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ AE T P +PE A G+SNVGKSSL+N L+ RK LA TS PGKTQ I
Sbjct: 3 IKSAELETVCGITSTLPETEMPEIAFAGKSNVGKSSLINGLLNRKSLARTSSQPGKTQTI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N++ IN Y VDLPGYGYA E+R W K + Y L VFLLID
Sbjct: 63 NYYNINHDLYFVDLPGYGYAQVSVEIRAKWGKMVERYLHTSKQLRLVFLLIDIRHEPSEN 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D W+ +N ++ TK DK K+ + ++NL ++ IQ T I S
Sbjct: 123 DCIMYDWIVKNGYEPVIIATKLDKIKR-----SQIQKNLKIIRQKIQPVEGTI--IIPFS 175
Query: 285 SVTNQGRDEIL 295
+ T QG++EIL
Sbjct: 176 AQTKQGKEEIL 186
>gi|417149115|ref|ZP_11989206.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
1.2264]
gi|386161336|gb|EIH23139.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
1.2264]
Length = 210
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 68 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT-SS 285
+ W + I + ++ TK DK +G ++ + LN +E + F + T SS
Sbjct: 128 QMIEWAVDSNIAVLMLLTKADKL---ASGARKAQ--LNMVREAVLAF--NGDVQVETFSS 180
Query: 286 VTNQGRDEI 294
+ QG D++
Sbjct: 181 LKKQGVDKL 189
>gi|404377252|ref|ZP_10982389.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia sp.
1_1_43]
gi|226838512|gb|EEH70541.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia sp.
1_1_43]
Length = 210
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 68 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT-SS 285
+ W + I + ++ TK DK +G ++ + LN +E + F I T SS
Sbjct: 128 QMIEWAVDSNIAVLVLLTKADKL---ASGARKAQ--LNMVREAVLAF--NGDVQIETFSS 180
Query: 286 VTNQGRDEI 294
+ QG D++
Sbjct: 181 LKKQGVDKL 189
>gi|312866664|ref|ZP_07726878.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
parasanguinis F0405]
gi|311097745|gb|EFQ55975.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
parasanguinis F0405]
Length = 200
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 101/186 (54%), Gaps = 11/186 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
A+ + S+ P D +PE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ +N
Sbjct: 7 NADILLSAANKSHYPQDEIPEVALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I+D LVD+PGYGYA ++ R W + ++Y +R L +V L+D D+
Sbjct: 67 FNIDDKLRLVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLKAVVSLVDFRHEPSADDV 126
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWIMTS 284
+ +L +IP+ LV TK D K P N + +I+ F A +I+ S
Sbjct: 127 QMYEFLKYYEIPVILVATKAD---------KIPRGKWNKHESIIKKKLDFDPADTFIVFS 177
Query: 285 SVTNQG 290
SVT +G
Sbjct: 178 SVTREG 183
>gi|309805713|ref|ZP_07699753.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LactinV 09V1-c]
gi|329921292|ref|ZP_08277730.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
SPIN 1401G]
gi|308164966|gb|EFO67209.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LactinV 09V1-c]
gi|328934584|gb|EGG31088.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
SPIN 1401G]
Length = 195
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 92/152 (60%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V ++FV S+V + P D LPE AL GRSNVGKSSL+N+++ R+ LA TS+ PGKTQ
Sbjct: 2 KVNNSKFVISAVSDKQYPQDDLPEIALSGRSNVGKSSLINAVLNRRNLARTSQQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + +N Y VD+PGYGYA +E R + + +DY R+ L + LL+DA
Sbjct: 62 LNFYLVNTDLYFVDVPGYGYAKVSKEQRQKFGEMIQDYLETRADLKGLVLLVDARHDPTV 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNG 255
D+ ++ IP+ +V TK DK KK G
Sbjct: 122 DDINMFNYALCLNIPILVVATKIDKLKKSAIG 153
>gi|188590593|ref|YP_001921995.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
E3 str. Alaska E43]
gi|238691973|sp|B2UX10.1|ENGB_CLOBA RecName: Full=Probable GTP-binding protein EngB
gi|188500874|gb|ACD54010.1| GTP-binding protein [Clostridium botulinum E3 str. Alaska E43]
Length = 198
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 105/192 (54%), Gaps = 7/192 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ Q+EF+ S+V+ P D E A VGRSNVGKSSL+NSL RKKLA S TPGKT+
Sbjct: 2 RIKQSEFIISAVKPHQYPIDNRNEVAFVGRSNVGKSSLINSLTNRKKLAKVSGTPGKTRL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F IN+ +YLVDLPGYGYA + + W K + Y +R L + L+D+
Sbjct: 62 INFFLINNDFYLVDLPGYGYAKVSKSEKDTWGKTIETYLSHREELKRIVCLVDSRHKPTG 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D+ W + +V TK DK K + K+ E+ + D +L + +
Sbjct: 122 DDIMMYEWAKHFGYDVVIVATKSDKLKNAE--FKKSEKLIRDTLKLTKD-----DKFYFY 174
Query: 284 SSVTNQGRDEIL 295
SS+ +G +E++
Sbjct: 175 SSLNKKGTEELI 186
>gi|427429275|ref|ZP_18919310.1| GTP-binding protein EngB [Caenispirillum salinarum AK4]
gi|425880468|gb|EKV29164.1| GTP-binding protein EngB [Caenispirillum salinarum AK4]
Length = 226
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 98/195 (50%), Gaps = 5/195 (2%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+A FV + P + LPE GRSNVGKSSL+N+L R KLA TS TPG+TQ +N
Sbjct: 33 EATFVLGAAALVQIPEEPLPEVCFAGRSNVGKSSLINALTNRNKLARTSDTPGRTQELNF 92
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D + DLPGYG+A AP+E W T Y R+ L V +L+D+ K D
Sbjct: 93 FNLGDRLMIADLPGYGFAKAPKEKVKQWTAVTMAYLQGRAQLRRVMVLVDSRHGLKDSDH 152
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSV 286
+ L Q + +V TK DK K G + E+ + + Q+ + P I TSS
Sbjct: 153 DVMKMLDQAAVNYQVVLTKIDKLK-----GNQAEKRVAETQDALAKHVAAHPVVIPTSSA 207
Query: 287 TNQGRDEILLHMAQL 301
G E+ + L
Sbjct: 208 KGDGIPELRAEIGAL 222
>gi|255658242|ref|ZP_05403651.1| ribosome biogenesis GTP-binding protein YsxC [Mitsuokella multacida
DSM 20544]
gi|260849552|gb|EEX69559.1| ribosome biogenesis GTP-binding protein YsxC [Mitsuokella multacida
DSM 20544]
Length = 234
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 108/213 (50%), Gaps = 22/213 (10%)
Query: 97 SKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSK 156
+K A + Q +++ S+V+ + P LPE +GRSNVGKSSL+NSL R + LA S
Sbjct: 22 AKTAELVVITQGKYIASAVKKDQYPERELPEVVFIGRSNVGKSSLINSLTRIRGLARVSS 81
Query: 157 TPGKTQCINHFRIN--------------DSWYLVDLPGYGYAAAPRELRTDWDKFTKDYF 202
PGKTQ IN F + +YLVDLPGYGYA +E R W KF +Y
Sbjct: 82 QPGKTQTINFFELTAKLRDPESGEEQGRKDFYLVDLPGYGYAKTGKERRKIWKKFIDEYL 141
Query: 203 LNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEEN 262
L L V LID D+E WL ++ +P+ ++ TK D K G ++N
Sbjct: 142 LTSPQLQFVCQLIDIRHEPMASDVEMFQWLVEHHVPVLIIATKAD-----KIGKNARQKN 196
Query: 263 LNDFQELIQGFFQTAPPWIMTSSVTNQGRDEIL 295
+ + + + P+ SSV N+GR ++L
Sbjct: 197 IAAIRRALGVKEISILPY---SSVKNEGRSDLL 226
>gi|259500683|ref|ZP_05743585.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
DSM 13335]
gi|302191373|ref|ZP_07267627.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
AB-1]
gi|312871414|ref|ZP_07731509.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LEAF 3008A-a]
gi|312872272|ref|ZP_07732342.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LEAF 2062A-h1]
gi|312875467|ref|ZP_07735470.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LEAF 2053A-b]
gi|325912884|ref|ZP_08175262.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
UPII 60-B]
gi|259168067|gb|EEW52562.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
DSM 13335]
gi|311088978|gb|EFQ47419.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LEAF 2053A-b]
gi|311092095|gb|EFQ50469.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LEAF 2062A-h1]
gi|311093067|gb|EFQ51416.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LEAF 3008A-a]
gi|325477877|gb|EGC81011.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
UPII 60-B]
Length = 195
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 92/152 (60%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V ++FV S+V + P D LPE AL GRSNVGKSSL+N+++ R+ LA TS+ PGKTQ
Sbjct: 2 KVNNSKFVISAVSDKQYPQDDLPEIALSGRSNVGKSSLINAVLNRRNLARTSQQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + +N Y VD+PGYGYA +E R + + +DY R+ L + LL+DA
Sbjct: 62 LNFYLVNTDLYFVDVPGYGYAKVSKEQRQKFGEMIQDYLETRADLKGLVLLVDARHDPTV 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNG 255
D+ ++ IP+ +V TK DK KK G
Sbjct: 122 DDINMFNYALCLNIPILVVATKIDKLKKSAIG 153
>gi|257090205|ref|ZP_05584566.1| GTP-binding protein [Enterococcus faecalis CH188]
gi|256999017|gb|EEU85537.1| GTP-binding protein [Enterococcus faecalis CH188]
Length = 193
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 99/190 (52%), Gaps = 11/190 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V AE V S+V + P LPE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ +
Sbjct: 3 VHNAEIVISAVSPKQYPESQLPEIALAGRSNVGKSSFINTLINRKNLARTSGKPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + I D+ + VD+PGYGYA + R W K + Y R L V LID P
Sbjct: 63 NFYLIEDALHFVDVPGYGYAKVSKTERAKWGKMIETYITQREQLRVVVSLIDLRHPPTQD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWIM 282
D++ +L +P+ +V TK D K P N + +I+ F +I+
Sbjct: 123 DIQMYEFLKYYDLPVIIVATKAD---------KIPRGKWNKHESVIKKALNFDKQDDFII 173
Query: 283 TSSVTNQGRD 292
SS T +G++
Sbjct: 174 FSSETKEGKE 183
>gi|345301540|ref|YP_004830898.1| GTP-binding protein engB [Enterobacter asburiae LF7a]
gi|345095477|gb|AEN67113.1| GTP-binding protein engB [Enterobacter asburiae LF7a]
Length = 209
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 102/191 (53%), Gaps = 12/191 (6%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNALTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R L + +L+D P K +D
Sbjct: 68 FEVADGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRQCLKGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF---FQTAPPWIMT 283
+ W ++I + ++ TK DK +G ++ + N+ +E + F Q P
Sbjct: 128 QMIDWAVASEIAVLVLLTKADKL---ASGARKAQVNM--VREAVLAFNGDVQVEP----F 178
Query: 284 SSVTNQGRDEI 294
SS+ QG D++
Sbjct: 179 SSLKKQGVDKL 189
>gi|331270301|ref|YP_004396793.1| HSR1-like GTP-binding protein [Clostridium botulinum BKT015925]
gi|329126851|gb|AEB76796.1| GTP-binding protein, HSR1-related protein [Clostridium botulinum
BKT015925]
Length = 197
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 91/164 (55%), Gaps = 12/164 (7%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +EF+ S+V+ + P D E A VGRSN GKS+L+N++ RKKLA TS TPGKT+ I
Sbjct: 3 IKNSEFIISAVKPDQYPIDNRIEMAFVGRSNAGKSTLINTITNRKKLAKTSSTPGKTRLI 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F IN+ +Y VDLPGYG+A + + W + Y +NR L + LL+D+
Sbjct: 63 NFFLINNDFYFVDLPGYGFAKVSKSEQQKWGSMMETYLVNRPQLKKIVLLVDSRHKPTKD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQE 268
D++ W+ +V TK DK KK NDFQ+
Sbjct: 123 DVQMYEWIKYYGYEAIIVATKSDKLKK------------NDFQK 154
>gi|307705962|ref|ZP_07642787.1| conserved hypothetical protein [Streptococcus mitis SK564]
gi|307620472|gb|EFN99583.1| conserved hypothetical protein [Streptococcus mitis SK564]
Length = 195
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 101/192 (52%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+ AE + S+ P D LPE AL GRSNVGKSS +N+++ RK LA TS PGKTQ
Sbjct: 4 NIHNAEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQL 63
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N F I+D VD+PGYGYA ++ R W + ++Y R L +V L+D
Sbjct: 64 LNFFNIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSA 123
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D++ +L +IP+ +V TK DK R K ++ LN F + +I
Sbjct: 124 DDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLN---------FDPSDDFI 174
Query: 282 MTSSVTNQGRDE 293
+ SSV+ G DE
Sbjct: 175 LFSSVSKAGMDE 186
>gi|309804144|ref|ZP_07698222.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LactinV 11V1-d]
gi|309807084|ref|ZP_07701063.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LactinV 03V1-b]
gi|309807950|ref|ZP_07701878.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LactinV 01V1-a]
gi|309809256|ref|ZP_07703125.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
SPIN 2503V10-D]
gi|312873935|ref|ZP_07733971.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LEAF 2052A-d]
gi|325911981|ref|ZP_08174383.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
UPII 143-D]
gi|349611375|ref|ZP_08890611.1| GTP-binding protein engB [Lactobacillus sp. 7_1_47FAA]
gi|308163727|gb|EFO65996.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LactinV 11V1-d]
gi|308166514|gb|EFO68714.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LactinV 03V1-b]
gi|308168801|gb|EFO70891.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LactinV 01V1-a]
gi|308170369|gb|EFO72393.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
SPIN 2503V10-D]
gi|311090484|gb|EFQ48892.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LEAF 2052A-d]
gi|325476166|gb|EGC79330.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
UPII 143-D]
gi|348608697|gb|EGY58667.1| GTP-binding protein engB [Lactobacillus sp. 7_1_47FAA]
Length = 195
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 92/152 (60%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V ++FV S+V + P D LPE AL GRSNVGKSSL+N+++ R+ LA TS+ PGKTQ
Sbjct: 2 KVNNSKFVISAVSDKQYPQDDLPEIALSGRSNVGKSSLINAVLNRRNLARTSQQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + +N Y VD+PGYGYA +E R + + +DY R+ L + LL+DA
Sbjct: 62 LNFYLVNTDLYFVDVPGYGYAKVSKEQRQKFGEMIQDYLETRADLKGLVLLVDARHDPTV 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNG 255
D+ ++ IP+ +V TK DK KK G
Sbjct: 122 DDINMFNYALCLNIPILVVATKIDKLKKSAIG 153
>gi|154686955|ref|YP_001422116.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
amyloliquefaciens FZB42]
gi|375363232|ref|YP_005131271.1| putative GTP-binding protein engB [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|384266365|ref|YP_005422072.1| GTP-binding protein EngB [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387899401|ref|YP_006329697.1| GTP-binding protein [Bacillus amyloliquefaciens Y2]
gi|394991896|ref|ZP_10384692.1| GTP-binding protein YsxC [Bacillus sp. 916]
gi|421730777|ref|ZP_16169903.1| GTP-binding protein YsxC [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|451346033|ref|YP_007444664.1| GTP-binding protein YsxC [Bacillus amyloliquefaciens IT-45]
gi|166225941|sp|A7Z7A9.1|ENGB_BACA2 RecName: Full=Probable GTP-binding protein EngB
gi|154352806|gb|ABS74885.1| YsxC [Bacillus amyloliquefaciens FZB42]
gi|371569226|emb|CCF06076.1| putative GTP-binding protein engB [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|380499718|emb|CCG50756.1| putative GTP-binding protein EngB [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|387173511|gb|AFJ62972.1| GTP-binding protein [Bacillus amyloliquefaciens Y2]
gi|393807255|gb|EJD68578.1| GTP-binding protein YsxC [Bacillus sp. 916]
gi|407074931|gb|EKE47918.1| GTP-binding protein YsxC [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|449849791|gb|AGF26783.1| GTP-binding protein YsxC [Bacillus amyloliquefaciens IT-45]
Length = 195
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 102/192 (53%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V ++E V S+V+ E P GLPE AL GRSNVGKSS +NSL+ RK LA TS PGKTQ
Sbjct: 2 KVTKSEIVISAVKPEQYPDGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IND + VD+PGYG+A + R W + + Y R L + ++D
Sbjct: 62 LNFYIINDELHFVDVPGYGFAKVSKSEREAWGRMIETYMTTREELKACVQIVDLRHAPSA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP--PWI 281
D+ +L IP+ ++ TK D K P+ + ++++ P I
Sbjct: 122 EDVNMYEFLKYYGIPVIVIATKAD---------KIPKGKWDKHLKVVKQTLDMDPEDELI 172
Query: 282 MTSSVTNQGRDE 293
+ SS T +G+DE
Sbjct: 173 LFSSETKKGKDE 184
>gi|58040259|ref|YP_192223.1| ribosome biogenesis GTP-binding protein YsxC [Gluconobacter oxydans
621H]
gi|81556980|sp|Q5FPX9.1|ENGB_GLUOX RecName: Full=Probable GTP-binding protein EngB
gi|58002673|gb|AAW61567.1| Probable GTP-binding protein EngB [Gluconobacter oxydans 621H]
Length = 227
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 101/197 (51%), Gaps = 5/197 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ EF S + + P G PE A GRSNVGKSS++N+L R+ LA S PG+T+ +
Sbjct: 22 AGECEFFFGSQKIDQLPPVGRPEVAFAGRSNVGKSSIINALTGRRALARASSEPGRTKQL 81
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F + D LVD+PGYG+A A + ++ DW Y R+TL V LL+DA I K
Sbjct: 82 NFFNLADRLSLVDMPGYGFAKAAKSVKEDWQDMMFAYLRGRTTLERVILLLDARIELKAS 141
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D + L + + +V TKCD+ K K K + + + L P I TS
Sbjct: 142 DKDVMELLDRAAVVFQIVLTKCDQVKPKALAAK-----IAEVEALALKHAAAYPRIIATS 196
Query: 285 SVTNQGRDEILLHMAQL 301
S T G +++ +A+
Sbjct: 197 SETGFGIEDLRAEIARF 213
>gi|387879643|ref|YP_006309946.1| GTP-binding protein [Streptococcus parasanguinis FW213]
gi|419799945|ref|ZP_14325260.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
parasanguinis F0449]
gi|385696625|gb|EIG27098.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
parasanguinis F0449]
gi|386793096|gb|AFJ26131.1| GTP-binding protein, putative [Streptococcus parasanguinis FW213]
Length = 200
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 101/186 (54%), Gaps = 11/186 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
A+ + S+ P D +PE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ +N
Sbjct: 7 NADILLSAANKSHYPQDEIPEVALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I+D LVD+PGYGYA ++ R W + ++Y +R L +V L+D D+
Sbjct: 67 FNIDDKLRLVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLKAVVSLVDFRHEPSADDV 126
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWIMTS 284
+ +L +IP+ LV TK D K P N + +I+ F A +I+ S
Sbjct: 127 QMYEFLKYYEIPVILVATKAD---------KIPRGKWNKHESIIKKKLDFDPADTFIVFS 177
Query: 285 SVTNQG 290
SVT +G
Sbjct: 178 SVTREG 183
>gi|256384099|gb|ACU78669.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma mycoides
subsp. capri str. GM12]
gi|256384931|gb|ACU79500.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma mycoides
subsp. capri str. GM12]
gi|296455974|gb|ADH22209.1| ribosome biogenesis GTP-binding protein YsxC [synthetic Mycoplasma
mycoides JCVI-syn1.0]
Length = 196
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 94/167 (56%), Gaps = 3/167 (1%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ QA F+ S+ + +D + E L+GRSNVGKSS +NSL KLA S TPGKT+ +
Sbjct: 2 IKQASFITSAANKSNWINDDVSEICLIGRSNVGKSSFINSLTNNNKLAKISNTPGKTRLL 61
Query: 165 NHFRINDSWY-LVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
N F IN Y LVD PGYGYA L+ + K ++YF+NR L VFLL+D
Sbjct: 62 NFFEINKGEYRLVDAPGYGYAKVDDNLKIQFAKMMEEYFINRKNLKGVFLLLDLRHKPSN 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK--NGGKRPEENLNDFQE 268
D+ +L IP+ ++ TK DK KK + K +E +N +QE
Sbjct: 122 DDIMMYQFLKHYNIPVVIIGTKLDKLKKSEYIKNEKMIKETINFYQE 168
>gi|407698104|ref|YP_006822892.1| GTPase [Alcanivorax dieselolei B5]
gi|407255442|gb|AFT72549.1| GTPase, putative [Alcanivorax dieselolei B5]
Length = 222
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 83/144 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA F+KS+ E CP D E A GRSN GKSS +N L ++ LA TSKTPG+TQ +N
Sbjct: 23 QAAFLKSAQIVEQCPPDEGLEVAFAGRSNAGKSSAINRLTGQRSLARTSKTPGRTQLLNF 82
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F +++ LVDLPGYGYA + +R W + DY R L + LL+D P + D
Sbjct: 83 FTLDEQRRLVDLPGYGYAKVDKAVRMQWQEHLDDYLARRECLTGLVLLMDIRHPLREFDQ 142
Query: 227 EYASWLGQNQIPMTLVFTKCDKRK 250
W ++ +P+ ++ TK DK K
Sbjct: 143 LMLEWSARSGMPLLILLTKADKLK 166
>gi|154497948|ref|ZP_02036326.1| hypothetical protein BACCAP_01928 [Bacteroides capillosus ATCC
29799]
gi|150272938|gb|EDN00095.1| ribosome biogenesis GTP-binding protein YsxC [Pseudoflavonifractor
capillosus ATCC 29799]
Length = 199
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 101/189 (53%), Gaps = 7/189 (3%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+AEFV+S+ ++ D P DGLP+ GRSNVGKSS++N ++ RK LA PGKT IN+
Sbjct: 7 RAEFVRSAAKSADFPRDGLPQVVFAGRSNVGKSSVINKILLRKNLARVGAAPGKTTHINY 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I++ YLVDLPGYGYA + R W + + +F + + + +++DA D
Sbjct: 67 FLIDEKLYLVDLPGYGYAKVSQAERDRWGRLIESWFADNALMTLGIMVVDARHKPTADDC 126
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSV 286
A W Q+ P +V K DK +K + E NL +E + I S+
Sbjct: 127 TMAEWFKQSGKPFLVVANKLDKLRKSE-----IEPNLARIRETLG--LPDDVKVIAFSAE 179
Query: 287 TNQGRDEIL 295
+GR E+L
Sbjct: 180 KGEGRQELL 188
>gi|417917255|ref|ZP_12560817.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
parasanguinis SK236]
gi|342830904|gb|EGU65229.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
parasanguinis SK236]
Length = 200
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 101/186 (54%), Gaps = 11/186 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
A+ + S+ P D +PE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ +N
Sbjct: 7 NADILLSAANKSHYPQDEIPEVALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I+D LVD+PGYGYA ++ R W + ++Y +R L +V L+D D+
Sbjct: 67 FNIDDKLRLVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLKAVVSLVDFRHEPSADDV 126
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWIMTS 284
+ +L +IP+ LV TK D K P N + +I+ F A +I+ S
Sbjct: 127 QMYEFLKYYEIPVILVATKAD---------KIPRGKWNKHESIIKKKLDFDPADTFIVFS 177
Query: 285 SVTNQG 290
SVT +G
Sbjct: 178 SVTREG 183
>gi|256619397|ref|ZP_05476243.1| GTP-binding protein [Enterococcus faecalis ATCC 4200]
gi|256598924|gb|EEU18100.1| GTP-binding protein [Enterococcus faecalis ATCC 4200]
Length = 193
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 83/144 (57%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V AE V S+V + P LPE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ +
Sbjct: 3 VHNAEIVISAVSPKQYPESQLPEIALAGRSNVGKSSFINTLINRKNLARTSGKPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + I D+ + VD+PGYGYA + R W K + Y R L +V LID P
Sbjct: 63 NFYLIEDALHFVDVPGYGYAKVSKTERAKWGKMIETYITQREQLRAVVSLIDLRHPPTQD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK 248
D++ +L +P+ +V TK DK
Sbjct: 123 DIQMYEFLKYYDLPVIIVATKADK 146
>gi|260599982|ref|YP_003212553.1| GTP-binding protein YsxC [Cronobacter turicensis z3032]
gi|260219159|emb|CBA34514.1| Probable GTP-binding protein engB [Cronobacter turicensis z3032]
Length = 220
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 88/157 (56%), Gaps = 3/157 (1%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 17 QTHFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 76
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R L + +L+D P K +D
Sbjct: 77 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQ 136
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENL 263
+ W + IP+ ++ TK DK +G ++ + N+
Sbjct: 137 QMIEWAVDSDIPVLVLLTKADKL---ASGARKAQLNM 170
>gi|189423527|ref|YP_001950704.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter lovleyi SZ]
gi|238692100|sp|B3E2D1.1|ENGB_GEOLS RecName: Full=Probable GTP-binding protein EngB
gi|189419786|gb|ACD94184.1| small GTP-binding protein [Geobacter lovleyi SZ]
Length = 200
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 91/156 (58%), Gaps = 5/156 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+ Q F+KS+V+ D P LPE A GRSNVGKSSL+N +V RK L TS TPG+TQ
Sbjct: 2 HIHQTTFIKSAVKPADYPPVDLPEIAFAGRSNVGKSSLINVIVERKALVRTSSTPGRTQL 61
Query: 164 INHFRIND---SWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDA-SI 219
IN F++ S LVDLPGYGYA P +++ W + Y R +L V L++D I
Sbjct: 62 INFFQVTGVPFSLNLVDLPGYGYAKVPLDVKRQWGPMMERYLSGRESLRGVVLILDIRRI 121
Query: 220 PAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNG 255
P++ DL+ +WL + +V TKCDK K +
Sbjct: 122 PSEE-DLQMLNWLRSYKRRPIIVLTKCDKVTKNERA 156
>gi|414155604|ref|ZP_11411915.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
F0442]
gi|410872829|gb|EKS20768.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
F0442]
Length = 200
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 101/186 (54%), Gaps = 11/186 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
A+ + S+ P D +PE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ +N
Sbjct: 7 NADILLSAANKSHYPQDEIPEVALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I+D LVD+PGYGYA ++ R W + ++Y +R L +V L+D D+
Sbjct: 67 FNIDDKLRLVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLKAVVSLVDFRHEPSADDI 126
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPP--WIMTS 284
+ +L +IP+ LV TK D K P N + +I+ + P +I+ S
Sbjct: 127 QMYEFLKYYEIPVILVATKAD---------KIPRGKWNKHESIIKKKLEFDPSDDFIIFS 177
Query: 285 SVTNQG 290
SVT +G
Sbjct: 178 SVTKEG 183
>gi|410462243|ref|ZP_11315835.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409984641|gb|EKO40938.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 208
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 101/181 (55%), Gaps = 10/181 (5%)
Query: 121 PSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWY-LVDLP 179
P+ P+ AL GRSNVGKS+L+N L RK LA TS TPGKT+ +N + Y LVDLP
Sbjct: 26 PTLDAPQIALAGRSNVGKSTLINCLAGRKALAKTSATPGKTRSLNFYMAETQGYCLVDLP 85
Query: 180 GYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPM 239
GYGYA +E R W K + Y TL +V LID +P + +D+E SWL +IP+
Sbjct: 86 GYGYARCSKEERDKWAKLIEAYLATTKTLRAVTALIDCRLPPQRLDMELVSWLRSRRIPV 145
Query: 240 TLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMA 299
+ TK +K ++ ++ E ++EL Q F PP ++ S T GR+ + A
Sbjct: 146 LVALTKAEKVPQRDREARKKE-----WRELAQPAF---PP-VVFSGKTGLGREALCRVFA 196
Query: 300 Q 300
+
Sbjct: 197 E 197
>gi|300856720|ref|YP_003781704.1| GTP-binding protein [Clostridium ljungdahlii DSM 13528]
gi|300436835|gb|ADK16602.1| predicted GTP-binding protein [Clostridium ljungdahlii DSM 13528]
Length = 196
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 104/193 (53%), Gaps = 9/193 (4%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ Q+EF+ S+V P D E A VGRSNVGKSSL+N+L RKKL S TPGKT+
Sbjct: 2 EIKQSEFIISAVSPRQYPVDNRVEVAFVGRSNVGKSSLINTLTNRKKLVKVSATPGKTRQ 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F IN+ +YLVDLPGYGYA ++ + W + Y R L + L++D
Sbjct: 62 INFFLINNDFYLVDLPGYGYAKVSKKEKESWGNIIEKYLNARQQLKKIVLILDCRHKPTA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D+ W+ + +V TK DK K + +NL ++ ++ + I+T
Sbjct: 122 DDITMYKWIKHYNYDIAIVATKIDKVSK-----NQLSKNLKVIRDTLK---MSGEDEILT 173
Query: 284 SSVTN-QGRDEIL 295
S N QG+++IL
Sbjct: 174 FSALNKQGKEKIL 186
>gi|406670721|ref|ZP_11077966.1| ribosome biogenesis GTP-binding protein YsxC [Facklamia hominis
CCUG 36813]
gi|405582237|gb|EKB56243.1| ribosome biogenesis GTP-binding protein YsxC [Facklamia hominis
CCUG 36813]
Length = 197
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 88/150 (58%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
Q+ +A FV S+V+ + P D L E AL GRSNVGKSS +N +V+RK LA TS PGKTQ
Sbjct: 2 QIKEANFVISAVKPDQYPQDDLLEVALAGRSNVGKSSFINRMVQRKALARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IN S+ VD+PGYGYA ++ R + K Y R + +FLL+D
Sbjct: 62 LNFYEINKSFRFVDVPGYGYARVSKQSRHAFSKLNASYLSQRPNIALLFLLMDIRHEPTR 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
+D E ++ IP ++ TK DK K+ +
Sbjct: 122 LDKEMFAFAESLDIPFAVILTKLDKIKRSQ 151
>gi|182680231|ref|YP_001834377.1| ribosome biogenesis GTP-binding protein YsxC [Beijerinckia indica
subsp. indica ATCC 9039]
gi|182636114|gb|ACB96888.1| GTP-binding protein HSR1-related [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 244
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 123/239 (51%), Gaps = 22/239 (9%)
Query: 71 VPPET---EVSIDDSSLSTRILKGSNIVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLPE 127
V PET EV +D S + I G + +A++ F ++ R++ P +G PE
Sbjct: 7 VVPETQGPEVGLDPISDAEEIEAGRKL----FAQECTF----FWGAAARSQ-LPPEGAPE 57
Query: 128 FALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDS-----WYLVDLPGYG 182
A GRSNVGKSSLLN+L RK LA TS TPG+TQ +N F + + LVD+PGYG
Sbjct: 58 IAFAGRSNVGKSSLLNALTGRKTLARTSHTPGRTQELNFFALGPTIESARMRLVDMPGYG 117
Query: 183 YAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPMTLV 242
YAAA +E W +D+ R L+ V++LID KPID E L Q+ I +V
Sbjct: 118 YAAASKEKIAAWTSLCRDFLRGRVPLLRVYVLIDGRHGLKPIDSETLDLLDQSAISYQIV 177
Query: 243 FTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMAQL 301
TK D+ KK + + + + + P I TSS + +G ++ +A+L
Sbjct: 178 LTKRDEVKKSEQAAR-----IASVKAALAKRPAAYPDVIFTSSQSGEGIADLRAAIARL 231
>gi|261866835|ref|YP_003254757.1| ribosome biogenesis GTP-binding protein YsxC [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|415770614|ref|ZP_11484957.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans D17P-2]
gi|416074686|ref|ZP_11584615.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
b str. SCC1398]
gi|416107974|ref|ZP_11590812.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
c str. SCC2302]
gi|444344584|ref|ZP_21152810.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
b str. SCC4092]
gi|444346334|ref|ZP_21154302.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
c str. AAS4A]
gi|261412167|gb|ACX81538.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans D11S-1]
gi|348004598|gb|EGY45096.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
c str. SCC2302]
gi|348006689|gb|EGY47084.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
b str. SCC1398]
gi|348656787|gb|EGY74394.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans D17P-2]
gi|443541786|gb|ELT52188.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
c str. AAS4A]
gi|443543822|gb|ELT53946.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
b str. SCC4092]
Length = 204
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 81/139 (58%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
F+ SS + P D E A GRSN GKS+ LN+L +K LA TSKTPG+TQ IN F +
Sbjct: 13 FLTSSPNLKSLPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 72
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
LVDLPGYGYAA P +++ W + +Y R L + +L+D P K +D +
Sbjct: 73 EPQCKLVDLPGYGYAAVPEQMKLQWQQALGEYLQKRECLAGIVILMDIRHPLKDLDQQMI 132
Query: 230 SWLGQNQIPMTLVFTKCDK 248
W +Q+P+ L+ TK DK
Sbjct: 133 EWAVASQLPVLLLLTKADK 151
>gi|239907036|ref|YP_002953777.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio
magneticus RS-1]
gi|239796902|dbj|BAH75891.1| probable GTP-binding protein EngB [Desulfovibrio magneticus RS-1]
Length = 208
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 101/181 (55%), Gaps = 10/181 (5%)
Query: 121 PSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWY-LVDLP 179
P+ P+ AL GRSNVGKS+L+N L RK LA TS TPGKT+ +N + Y LVDLP
Sbjct: 26 PTLDAPQIALAGRSNVGKSTLINCLAGRKSLAKTSATPGKTRSLNFYMAETQGYCLVDLP 85
Query: 180 GYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPM 239
GYGYA +E R W K + Y TL +V LID +P + +D+E SWL +IP+
Sbjct: 86 GYGYARCSKEERDKWAKLIEAYLATTKTLRAVTALIDCRLPPQRLDMELVSWLRSRRIPV 145
Query: 240 TLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEILLHMA 299
+ TK +K ++ ++ E ++EL Q F PP ++ S T GR+ + A
Sbjct: 146 LVALTKAEKVPQRDREARKKE-----WRELAQPAF---PP-VVFSGKTGLGREALCRVFA 196
Query: 300 Q 300
+
Sbjct: 197 E 197
>gi|167038047|ref|YP_001665625.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167040912|ref|YP_001663897.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
sp. X514]
gi|256752434|ref|ZP_05493293.1| small GTP-binding protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300914948|ref|ZP_07132264.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
sp. X561]
gi|307723818|ref|YP_003903569.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
sp. X513]
gi|320116456|ref|YP_004186615.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
brockii subsp. finnii Ako-1]
gi|238687604|sp|B0K530.1|ENGB_THEPX RecName: Full=Probable GTP-binding protein EngB
gi|238687677|sp|B0KBA1.1|ENGB_THEP3 RecName: Full=Probable GTP-binding protein EngB
gi|166855152|gb|ABY93561.1| small GTP-binding protein [Thermoanaerobacter sp. X514]
gi|166856881|gb|ABY95289.1| small GTP-binding protein [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256748703|gb|EEU61748.1| small GTP-binding protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300889883|gb|EFK85029.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
sp. X561]
gi|307580879|gb|ADN54278.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
sp. X513]
gi|319929547|gb|ADV80232.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
brockii subsp. finnii Ako-1]
Length = 192
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 83/148 (56%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ EF +S+ E P D LP+ +VGRSNVGKS+L+N+++ RK LA TS PGKT+
Sbjct: 2 KIKTVEFARSAFNEEQYPKDNLPQIVIVGRSNVGKSTLINTVLNRKNLAKTSSRPGKTRG 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN + IN+ +YLVDLPGYGYA +E++ W + + L LID
Sbjct: 62 INFYLINNKFYLVDLPGYGYAKVSKEMKKQWAHNIETFLNTSQNLRHGLFLIDIRRNPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKK 251
D +W +P T+V TK DK K
Sbjct: 122 DDFLMINWFKHKNLPFTVVLTKADKVNK 149
>gi|322372511|ref|ZP_08047047.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
C150]
gi|321277553|gb|EFX54622.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
C150]
Length = 199
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 99/189 (52%), Gaps = 11/189 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
AE + S+ P D LPE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ +N
Sbjct: 11 NAEILLSAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSGKPGKTQLLNF 70
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
+ I+D VD+PGYGYA ++ R W K ++Y + R L V L+D D+
Sbjct: 71 YNIDDKLRFVDVPGYGYARVSKKERAKWGKMIEEYLVTRDNLRVVVSLVDLRHEPTQDDI 130
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQG--FFQTAPPWIMTS 284
+ +L +IP+ +V TK D K P N + +I+ F +I+ S
Sbjct: 131 QMYEFLKYYEIPVIVVATKAD---------KIPRGKWNKHESVIKKKLNFDKNDHFIVFS 181
Query: 285 SVTNQGRDE 293
SVT G DE
Sbjct: 182 SVTRDGYDE 190
>gi|331649708|ref|ZP_08350788.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
M605]
gi|331041341|gb|EGI13491.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
M605]
Length = 215
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 13 QTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINL 72
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 73 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 132
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT-SS 285
+ W + I + ++ TK DK +G ++ + LN +E + F + T SS
Sbjct: 133 QMIEWAVDSNIAVLVLLTKADKL---ASGARKAQ--LNMVREAVLAF--NGDVQVETFSS 185
Query: 286 VTNQGRDEI 294
+ QG D++
Sbjct: 186 LKKQGVDKL 194
>gi|294634244|ref|ZP_06712787.1| ribosome biogenesis GTP-binding protein YsxC [Edwardsiella tarda
ATCC 23685]
gi|291092331|gb|EFE24892.1| ribosome biogenesis GTP-binding protein YsxC [Edwardsiella tarda
ATCC 23685]
Length = 254
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 89/154 (57%), Gaps = 3/154 (1%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
FV S+ P+D E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN F +
Sbjct: 49 FVTSAPDIRHLPADIGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 108
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
+D LVDLPGYGYA P E++ W + +Y R L + +L+D P K +D +
Sbjct: 109 DDGVRLVDLPGYGYAEVPEEMKRKWQRALGEYLQQRQCLKGLVVLMDIRHPLKDLDQQMI 168
Query: 230 SWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENL 263
+W + +P+ L+ TK DK +G ++ + NL
Sbjct: 169 AWAVEAGLPVLLLLTKADKL---ASGARKAQLNL 199
>gi|227529062|ref|ZP_03959111.1| GTPase [Lactobacillus vaginalis ATCC 49540]
gi|227351074|gb|EEJ41365.1| GTPase [Lactobacillus vaginalis ATCC 49540]
Length = 202
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 100/195 (51%), Gaps = 7/195 (3%)
Query: 100 ARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPG 159
+ QV + S+V ++ P+ PE ALVGRSNVGKSSL N L+ R+ A TS PG
Sbjct: 2 CKAVQVNNVDLTISAVESKQYPATNYPEIALVGRSNVGKSSLTNVLINRRNFAHTSSQPG 61
Query: 160 KTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASI 219
KTQ +N + + D Y VD+PGYGYA ++ R + K ++Y R L V L+D
Sbjct: 62 KTQTLNFYNVEDELYFVDVPGYGYAKVSKKERERFGKMIEEYLTTRQQLRGVIQLVDGRH 121
Query: 220 PAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPP 279
D+ WL IP +V TK D K K N R + ++ +L P
Sbjct: 122 KPTADDVSMYQWLAYYDIPTLIVGTKID--KVKPNARNRVKNDIIKTLDLT-----PKTP 174
Query: 280 WIMTSSVTNQGRDEI 294
++ S+V QG+D++
Sbjct: 175 LVLFSAVKKQGKDQV 189
>gi|416058784|ref|ZP_11580682.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
e str. SCC393]
gi|347999450|gb|EGY40281.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
e str. SCC393]
Length = 230
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 82/142 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+ F+ SS + P D E A GRSN GKS+ LN+L +K LA TSKTPG+TQ IN
Sbjct: 36 KTHFLTSSPNLKSLPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINL 95
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + LVDLPGYGYAA P +++ W + +Y R L + +L+D P K +D
Sbjct: 96 FEVEPQCKLVDLPGYGYAAVPEQMKLQWQQALGEYLQKRECLAGIVILMDIRHPLKDLDQ 155
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
+ W +Q+P+ L+ TK DK
Sbjct: 156 QMIKWAVASQLPVLLLLTKADK 177
>gi|308174517|ref|YP_003921222.1| GTPase [Bacillus amyloliquefaciens DSM 7]
gi|384160348|ref|YP_005542421.1| GTP-binding protein YsxC [Bacillus amyloliquefaciens TA208]
gi|384165285|ref|YP_005546664.1| ribosome 50S subunit assembly GTPase [Bacillus amyloliquefaciens
LL3]
gi|384169426|ref|YP_005550804.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
amyloliquefaciens XH7]
gi|307607381|emb|CBI43752.1| GTPase involved in ribosome 50S subunit assembly [Bacillus
amyloliquefaciens DSM 7]
gi|328554436|gb|AEB24928.1| GTP-binding protein YsxC [Bacillus amyloliquefaciens TA208]
gi|328912840|gb|AEB64436.1| GTPase involved in ribosome 50S subunit assembly [Bacillus
amyloliquefaciens LL3]
gi|341828705|gb|AEK89956.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
amyloliquefaciens XH7]
Length = 195
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 102/192 (53%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V ++E V S+V+ E P GLPE AL GRSNVGKSS +NSL+ RK LA TS PGKTQ
Sbjct: 2 KVTKSEIVISAVKPEQYPDGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IND + VD+PGYG+A + R W + + Y R L + ++D
Sbjct: 62 LNFYIINDELHFVDVPGYGFAKVSKSEREAWGRMIETYMTTREELKACVQIVDLRHAPSA 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP--PWI 281
D+ +L IP+ ++ TK D K P+ + ++++ P I
Sbjct: 122 DDVNMYEFLKYYGIPVIVIATKAD---------KIPKGKWDKHLKVVKQTLDMDPEDELI 172
Query: 282 MTSSVTNQGRDE 293
+ SS T +G+DE
Sbjct: 173 LFSSETKKGKDE 184
>gi|337282066|ref|YP_004621537.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
parasanguinis ATCC 15912]
gi|335369659|gb|AEH55609.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
parasanguinis ATCC 15912]
Length = 200
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 101/186 (54%), Gaps = 11/186 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
A+ + S+ P D +PE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ +N
Sbjct: 7 NADILLSAANKSHYPQDEIPEVALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I+D LVD+PGYGYA ++ R W + ++Y +R L +V L+D D+
Sbjct: 67 FNIDDKLRLVDVPGYGYARVSKKEREKWGRMIEEYLTSRKNLKAVVSLVDFRHEPSADDV 126
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWIMTS 284
+ +L +IP+ LV TK D K P N + +I+ F A +I+ S
Sbjct: 127 QMYEFLKYYEIPVILVATKAD---------KIPRGKWNKHESIIKKKLDFDPADTFIVFS 177
Query: 285 SVTNQG 290
SVT +G
Sbjct: 178 SVTREG 183
>gi|295113199|emb|CBL31836.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Enterococcus sp.
7L76]
Length = 193
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 100/190 (52%), Gaps = 11/190 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V AE + S+V + P LPE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ +
Sbjct: 3 VHNAEIMISAVSPKQYPESQLPEIALAGRSNVGKSSFINTLINRKNLARTSGKPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N + I D+ + VD+PGYGYA + R W K + Y R L +V LID P
Sbjct: 63 NFYLIEDALHFVDVPGYGYAKVSKTERAKWGKMIETYITQREQLRAVVSLIDLRHPPTQD 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWIM 282
D++ +L +P+ +V TK D K P N + +I+ F +I+
Sbjct: 123 DIQMYEFLKYYDLPVIIVATKAD---------KIPRGKWNKHESVIKKALNFDKQDDFII 173
Query: 283 TSSVTNQGRD 292
SS T +G++
Sbjct: 174 FSSETKEGKE 183
>gi|84499799|ref|ZP_00998087.1| GTP-binding protein [Oceanicola batsensis HTCC2597]
gi|84392943|gb|EAQ05154.1| GTP-binding protein [Oceanicola batsensis HTCC2597]
Length = 216
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 81/146 (55%)
Query: 106 AQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCIN 165
+ EFVK V + P E GRSNVGKSSL+N+L + LA S TPG+TQ IN
Sbjct: 25 GETEFVKGVVAMDGLPPADRMEVCFAGRSNVGKSSLINALTGTRNLARASNTPGRTQEIN 84
Query: 166 HFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPID 225
+F + D YLVDLPGYGYA AP + W + + Y R TL F+LIDA K +D
Sbjct: 85 YFTLGDRGYLVDLPGYGYANAPLPVVEKWQRLLRQYLSGRQTLRRAFVLIDARHGVKKVD 144
Query: 226 LEYASWLGQNQIPMTLVFTKCDKRKK 251
E S L + +V TK DK ++
Sbjct: 145 EEIMSLLDSAAVTFEVVLTKIDKVRR 170
>gi|366158351|ref|ZP_09458213.1| GTP-binding protein YsxC [Escherichia sp. TW09308]
gi|432374189|ref|ZP_19617220.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE11]
gi|430893611|gb|ELC15935.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE11]
Length = 210
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 68 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT-SS 285
+ W + I + ++ TK DK +G ++ + LN +E + F + T SS
Sbjct: 128 QMIEWAVDSNIAVLVLLTKADKL---ASGARKAQ--LNMVREAVLAF--NGDVQVETFSS 180
Query: 286 VTNQGRDEI 294
+ QG D++
Sbjct: 181 LKKQGVDKL 189
>gi|291612510|ref|YP_003522667.1| ribosome biogenesis GTP-binding protein YsxC [Sideroxydans
lithotrophicus ES-1]
gi|291582622|gb|ADE10280.1| ribosome biogenesis GTP-binding protein YsxC [Sideroxydans
lithotrophicus ES-1]
Length = 204
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 99/188 (52%), Gaps = 6/188 (3%)
Query: 106 AQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCIN 165
+QA F + +D P G E A VGRSN GKSS +N+L +LA TSKTPG+TQ +N
Sbjct: 5 SQAAFYTTVNHMKDLPLHGGKEVAFVGRSNAGKSSAINTLANHTRLAFTSKTPGRTQHLN 64
Query: 166 HFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPID 225
+F + ++ YLVDLPGYGYA P +++ W+ +Y R L + +++DA P D
Sbjct: 65 YFSLGNNNYLVDLPGYGYAKVPPDVQAHWEHLLSEYLQTREELCGLVVIMDARHPLTERD 124
Query: 226 LEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSS 285
W P+ ++ TK DK ++++ + L D +E + F + SS
Sbjct: 125 QGMLGWFAPTGKPIHILLTKSDKLSRQQS-----TQTLRDVKEFLAEHFPQCTAQLF-SS 178
Query: 286 VTNQGRDE 293
+ G DE
Sbjct: 179 LKKAGMDE 186
>gi|114322004|ref|YP_743687.1| cell division checkpoint GTPase YihA [Alkalilimnicola ehrlichii
MLHE-1]
gi|119368788|sp|Q0A4P0.1|ENGB_ALHEH RecName: Full=Probable GTP-binding protein EngB
gi|114228398|gb|ABI58197.1| cell division checkpoint GTPase YihA [Alkalilimnicola ehrlichii
MLHE-1]
Length = 206
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 87/158 (55%), Gaps = 6/158 (3%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA F+ S+ P D E A GRSNVGKSS +N+L +K LA TSKTPG+TQ IN
Sbjct: 7 QARFLTSAPDLRRMPPDQGREVAFAGRSNVGKSSAINTLTNQKSLARTSKTPGRTQLINV 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I D LVDLPGYGYA P +R WD+ +Y R L V L++D P D
Sbjct: 67 FPITDEAALVDLPGYGYAKVPAAVRRRWDQVLPEYLAGRRALRGVVLVMDLRHPLTDFDR 126
Query: 227 EYASWLGQNQIPMTLVFTKCDK------RKKKKNGGKR 258
+ W G +P+ ++ TK DK R + +N G++
Sbjct: 127 QMLDWCGHIGVPLHVLLTKADKFKAGAARNRGQNVGRQ 164
>gi|451967433|ref|ZP_21920675.1| putative GTP-binding protein EngB [Edwardsiella tarda NBRC 105688]
gi|451313754|dbj|GAC66037.1| putative GTP-binding protein EngB [Edwardsiella tarda NBRC 105688]
Length = 218
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 89/154 (57%), Gaps = 3/154 (1%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
FV S+ P+D E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN F +
Sbjct: 13 FVTSAPDIRHLPADIGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 72
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
+D LVDLPGYGYA P E++ W + +Y R L + +L+D P K +D +
Sbjct: 73 DDGVRLVDLPGYGYAEVPEEMKRKWQRALGEYLQQRQCLKGLVVLMDIRHPLKDLDQQMI 132
Query: 230 SWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENL 263
+W + +P+ L+ TK DK +G ++ + NL
Sbjct: 133 AWAVEAGLPVLLLLTKADKL---ASGARKAQLNL 163
>gi|301300955|ref|ZP_07207120.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
salivarius ACS-116-V-Col5a]
gi|300851422|gb|EFK79141.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
salivarius ACS-116-V-Col5a]
Length = 196
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 99/191 (51%), Gaps = 7/191 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
QV S+VR E P LPE AL GRSNVGKSSL+N+L+ R+ A TS PGKTQ
Sbjct: 2 QVHNVNLTISAVRPEQYPDAKLPEVALAGRSNVGKSSLINTLINRRNYARTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + I D Y VD+PGYGYA ++ R W + + YF R L L+DA
Sbjct: 62 LNFYNIEDLLYFVDVPGYGYAKVSQKEREKWARMIETYFSTRQELKGAISLVDARHEPSE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
+D + +L IP+ +V TK DK K K + E + +L + I+
Sbjct: 122 LDCQMIEFLHYYNIPVLVVGTKIDKIPKSKRN--KSESQIRKKLQLTKN-----DRLILF 174
Query: 284 SSVTNQGRDEI 294
S++ G+DE+
Sbjct: 175 SAIDKIGKDEV 185
>gi|317129824|ref|YP_004096106.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
cellulosilyticus DSM 2522]
gi|315474772|gb|ADU31375.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
cellulosilyticus DSM 2522]
Length = 197
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 106/200 (53%), Gaps = 11/200 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AE + S+ + P+ PE AL GRSNVGKSS +N+++ RK LA TS+ PGKTQ
Sbjct: 2 KINSAEIIISAAKPHQFPAGPFPEVALSGRSNVGKSSFINTMLARKGLARTSQRPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IN+ ++ VD+PGYGYA + R W + + YF R L V LID
Sbjct: 62 LNWYFINERFHFVDVPGYGYAKVSKSEREAWGRVMETYFQEREQLKGVVQLIDIRHKPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWI 281
D+ WL ++ P+ +V TK DK R K K+ +E+L T +
Sbjct: 122 DDVMMYDWLKHHEHPVLIVATKADKIPRGKWDKHVKQIKEHLE---------LHTEDKIV 172
Query: 282 MTSSVTNQGRDEILLHMAQL 301
+ SS T QG+++ M+ L
Sbjct: 173 VFSSETGQGKEKAWKEMSNL 192
>gi|416031612|ref|ZP_11572570.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
a str. H5P1]
gi|416066645|ref|ZP_11582050.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
f str. D18P1]
gi|429732448|ref|ZP_19267060.1| ribosome biogenesis GTP-binding protein YsxC [Aggregatibacter
actinomycetemcomitans Y4]
gi|348001339|gb|EGY42088.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
a str. H5P1]
gi|348002640|gb|EGY43319.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
f str. D18P1]
gi|429156158|gb|EKX98796.1| ribosome biogenesis GTP-binding protein YsxC [Aggregatibacter
actinomycetemcomitans Y4]
Length = 204
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 81/139 (58%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
F+ SS + P D E A GRSN GKS+ LN+L +K LA TSKTPG+TQ IN F +
Sbjct: 13 FLTSSPNLKSLPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 72
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
LVDLPGYGYAA P +++ W + +Y R L + +L+D P K +D +
Sbjct: 73 EPQCKLVDLPGYGYAAVPEQMKLQWQQALGEYLQKRECLAGIVILMDIRHPLKDLDQQMI 132
Query: 230 SWLGQNQIPMTLVFTKCDK 248
W +Q+P+ L+ TK DK
Sbjct: 133 KWAVASQLPVLLLLTKADK 151
>gi|71732506|gb|EAO34559.1| GTP-binding protein [Xylella fastidiosa subsp. sandyi Ann-1]
Length = 219
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 84/141 (59%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A+++ S+ PSD E A GRSN GKSS+LN+L R+ LA SKTPG+TQ + +F
Sbjct: 24 AKYLLSAHTIHQLPSDDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYF 83
Query: 168 RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
+ YLVDLPGYGYA P+EL+ W F YF +R +L + +++D P K DL+
Sbjct: 84 TVTPQRYLVDLPGYGYAKVPKELQIHWQAFIDTYFHHRQSLRGLVVVMDIRHPLKEYDLQ 143
Query: 228 YASWLGQNQIPMTLVFTKCDK 248
++ Q +P + TK DK
Sbjct: 144 MLAYARQRGLPAQALLTKADK 164
>gi|117626138|ref|YP_859461.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli APEC
O1]
gi|227885401|ref|ZP_04003206.1| GTP-binding protein [Escherichia coli 83972]
gi|300976574|ref|ZP_07173524.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
45-1]
gi|300985860|ref|ZP_07177624.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
200-1]
gi|301046668|ref|ZP_07193797.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
185-1]
gi|386631828|ref|YP_006151548.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli str.
'clone D i2']
gi|386636748|ref|YP_006156467.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli str.
'clone D i14']
gi|386641515|ref|YP_006108313.1| GTP-binding protein [Escherichia coli ABU 83972]
gi|422356619|ref|ZP_16437299.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
110-3]
gi|422364494|ref|ZP_16445010.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
153-1]
gi|422367993|ref|ZP_16448413.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
16-3]
gi|422376113|ref|ZP_16456366.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
60-1]
gi|422381927|ref|ZP_16462090.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
57-2]
gi|259645893|sp|A1AI47.1|ENGB_ECOK1 RecName: Full=Probable GTP-binding protein EngB
gi|115515262|gb|ABJ03337.1| putative GTP-binding protein [Escherichia coli APEC O1]
gi|227837659|gb|EEJ48125.1| GTP-binding protein [Escherichia coli 83972]
gi|300301380|gb|EFJ57765.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
185-1]
gi|300306499|gb|EFJ61019.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
200-1]
gi|300410032|gb|EFJ93570.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
45-1]
gi|307556007|gb|ADN48782.1| probable GTP-binding protein [Escherichia coli ABU 83972]
gi|315289565|gb|EFU48958.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
110-3]
gi|315292789|gb|EFU52141.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
153-1]
gi|315300260|gb|EFU59496.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
16-3]
gi|324006859|gb|EGB76078.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
57-2]
gi|324012583|gb|EGB81802.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
60-1]
gi|355422727|gb|AER86924.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli str.
'clone D i2']
gi|355427647|gb|AER91843.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli str.
'clone D i14']
Length = 215
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 13 QTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 72
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 73 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 132
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT-SS 285
+ W + I + ++ TK DK +G ++ + LN +E + F + T SS
Sbjct: 133 QMIEWAVDSNIAVLVLLTKADKL---ASGARKAQ--LNMVREAVLAF--NGDVQVETFSS 185
Query: 286 VTNQGRDEI 294
+ QG D++
Sbjct: 186 LKKQGVDKL 194
>gi|293470176|ref|ZP_06664587.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
B088]
gi|427807055|ref|ZP_18974122.1| gtp-binding protein [Escherichia coli chi7122]
gi|427811644|ref|ZP_18978709.1| hypothetical protein BN17_38121 [Escherichia coli]
gi|291321386|gb|EFE60825.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
B088]
gi|412965237|emb|CCK49168.1| gtp-binding protein [Escherichia coli chi7122]
gi|412971823|emb|CCJ46489.1| hypothetical protein BN17_38121 [Escherichia coli]
Length = 216
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 14 QTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 73
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 74 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 133
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT-SS 285
+ W + I + ++ TK DK +G ++ + LN +E + F + T SS
Sbjct: 134 QMIEWAVDSNIAVLVLLTKADKL---ASGARKAQ--LNMVREAVLAF--NGDVQVETFSS 186
Query: 286 VTNQGRDEI 294
+ QG D++
Sbjct: 187 LKKQGVDKL 195
>gi|402297606|ref|ZP_10817368.1| GTP-binding protein YsxC [Bacillus alcalophilus ATCC 27647]
gi|401727143|gb|EJT00339.1| GTP-binding protein YsxC [Bacillus alcalophilus ATCC 27647]
Length = 195
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 99/192 (51%), Gaps = 11/192 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V E +V+ E P+ LPE AL GRSNVGKSS +N ++ RK LA TS PGKTQ
Sbjct: 2 KVTNVELATVAVKPEQYPNTQLPEVALAGRSNVGKSSFINKMINRKALARTSGRPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + +N+ Y VD+PGYG+A + R W + + Y +R L +V LID
Sbjct: 62 LNFYMVNEMVYFVDVPGYGFAKVSKSEREAWGRMIETYLQSREPLKAVIQLIDIRHKPSQ 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAP--PWI 281
D WL +IP+ +V TK D K P+ Q++I+ P P +
Sbjct: 122 DDKLMYEWLKHFEIPVIIVATKSD---------KIPKGKWQKHQKVIEKELNKHPEDPVV 172
Query: 282 MTSSVTNQGRDE 293
+ SS T G++E
Sbjct: 173 LFSSETGNGKEE 184
>gi|365966651|ref|YP_004948213.1| ribosome biogenesis GTP-binding protein YsxC [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|365745564|gb|AEW76469.1| ribosome biogenesis GTP-binding protein YsxC [Aggregatibacter
actinomycetemcomitans ANH9381]
Length = 240
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 82/142 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+ F+ SS + P D E A GRSN GKS+ LN+L +K LA TSKTPG+TQ IN
Sbjct: 46 KTHFLTSSPNLKSLPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINL 105
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + LVDLPGYGYAA P +++ W + +Y R L + +L+D P K +D
Sbjct: 106 FEVEPQCKLVDLPGYGYAAVPEQMKLQWQQALGEYLQKRECLAGIVILMDIRHPLKDLDQ 165
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
+ W +Q+P+ L+ TK DK
Sbjct: 166 QMIEWAVASQLPVLLLLTKADK 187
>gi|422807553|ref|ZP_16855983.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia
fergusonii B253]
gi|324111948|gb|EGC05928.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia
fergusonii B253]
Length = 210
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 68 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT-SS 285
+ W + I + ++ TK DK +G ++ + LN +E + F + T SS
Sbjct: 128 QMIEWAVDSNIAVLVLLTKADKL---ASGARKAQ--LNMVREAVLAF--NGDVQVETFSS 180
Query: 286 VTNQGRDEI 294
+ QG D++
Sbjct: 181 LKKQGVDKL 189
>gi|432871789|ref|ZP_20091783.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE147]
gi|431407284|gb|ELG90496.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE147]
Length = 210
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 68 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT-SS 285
+ W + I + ++ TK DK +G ++ + LN +E + F + T SS
Sbjct: 128 QMIEWAVDSNIAVLVLLTKADKL---ASGARKAQ--LNMVREAVLAF--NGDVQVETFSS 180
Query: 286 VTNQGRDEI 294
+ QG D++
Sbjct: 181 LKKQGVDKL 189
>gi|417664509|ref|ZP_12314088.1| GTP-binding protein EngB [Escherichia coli AA86]
gi|330908183|gb|EGH36702.1| GTP-binding protein EngB [Escherichia coli AA86]
Length = 210
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 68 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT-SS 285
+ W + I + ++ TK DK +G ++ + LN +E + F + T SS
Sbjct: 128 QMIEWAVDSNIAVLVLLTKADKL---ASGARKAQ--LNMVREAVLAF--NGDVQVETFSS 180
Query: 286 VTNQGRDEI 294
+ QG D++
Sbjct: 181 LKKQGVDKL 189
>gi|424818147|ref|ZP_18243298.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia
fergusonii ECD227]
gi|325499167|gb|EGC97026.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia
fergusonii ECD227]
Length = 207
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 5 QTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 64
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 65 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 124
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT-SS 285
+ W + I + ++ TK DK +G ++ + LN +E + F + T SS
Sbjct: 125 QMIEWAVDSNIAVLVLLTKADKL---ASGARKAQ--LNMVREAVLAF--NGDVQVETFSS 177
Query: 286 VTNQGRDEI 294
+ QG D++
Sbjct: 178 LKKQGVDKL 186
>gi|422416061|ref|ZP_16493018.1| ribosome biogenesis GTP-binding protein YsxC [Listeria innocua FSL
J1-023]
gi|313623624|gb|EFR93787.1| ribosome biogenesis GTP-binding protein YsxC [Listeria innocua FSL
J1-023]
Length = 194
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 101/191 (52%), Gaps = 11/191 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V E V S+VR E P LPE+AL GRSNVGKSS +N+++RRK +A S+ PGKTQ +
Sbjct: 3 VNNVELVISAVRPEQYPETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N ++I ++ + VD+PGYG+A + R W + Y +R L V ++D
Sbjct: 63 NFYKIEEALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKPTED 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D +L +IP+ +V TK DK R K + K E L+ F +++
Sbjct: 123 DRMMYEFLKYYEIPVIVVATKADKIPRSKWQKNAKIVRETLD---------FDPDDKFVL 173
Query: 283 TSSVTNQGRDE 293
SS T G+DE
Sbjct: 174 FSSETKMGKDE 184
>gi|334702681|ref|ZP_08518547.1| GTP-binding protein YsxC [Aeromonas caviae Ae398]
Length = 204
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 76/129 (58%)
Query: 120 CPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLP 179
P+DG E A GRSN GKSS LN+L + K LA TSKTPG+TQ IN F + LVDLP
Sbjct: 10 LPNDGGVEIAFAGRSNAGKSSALNTLTKHKNLARTSKTPGRTQLINLFELEPGKRLVDLP 69
Query: 180 GYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIPM 239
GYGYA P E++ W K +Y R +L + +L+D P K D+ W ++P+
Sbjct: 70 GYGYAQVPLEMKLKWQKSLAEYLQRRESLKGLVILMDIRHPLKETDMNMLEWSSHRELPV 129
Query: 240 TLVFTKCDK 248
L+ TK DK
Sbjct: 130 MLLLTKADK 138
>gi|387121325|ref|YP_006287208.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans D7S-1]
gi|415764216|ref|ZP_11482316.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans D17P-3]
gi|416046189|ref|ZP_11575635.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
d str. I63B]
gi|347994796|gb|EGY36043.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans serotype
d str. I63B]
gi|348654341|gb|EGY69973.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans D17P-3]
gi|385875817|gb|AFI87376.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 240
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 82/142 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+ F+ SS + P D E A GRSN GKS+ LN+L +K LA TSKTPG+TQ IN
Sbjct: 46 KTHFLTSSPNLKSLPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINL 105
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + LVDLPGYGYAA P +++ W + +Y R L + +L+D P K +D
Sbjct: 106 FEVEPQCKLVDLPGYGYAAVPEQMKLQWQQALGEYLQKRECLAGIVILMDIRHPLKDLDQ 165
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
+ W +Q+P+ L+ TK DK
Sbjct: 166 QMIKWAVASQLPVLLLLTKADK 187
>gi|194468441|ref|ZP_03074427.1| small GTP-binding protein [Lactobacillus reuteri 100-23]
gi|194453294|gb|EDX42192.1| small GTP-binding protein [Lactobacillus reuteri 100-23]
Length = 196
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 100/193 (51%), Gaps = 11/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V + S+V E P +PE ALVGRSNVGKSSL N L+ R+ A TS PGKTQ
Sbjct: 2 EVHNVDLTISAVSDEQYPKTNIPEIALVGRSNVGKSSLTNVLINRRNFAHTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + + D Y VD+PGYGYA ++ R + K + Y R L V L+DA P
Sbjct: 62 LNFYDVEDKVYFVDVPGYGYAKVSKKERERFGKMIEQYLTQREQLRGVIQLVDARHEPTP 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFF--QTAPPWI 281
D+ +WL IP +V TK DK K+ N LI+ +++ P I
Sbjct: 122 DDVNMYNWLQYYNIPTLIVGTKIDKVKRSA---------WNRQLSLIKKALDVESSTPII 172
Query: 282 MTSSVTNQGRDEI 294
+ S+ +G+D++
Sbjct: 173 LFSATEKKGKDDV 185
>gi|88798525|ref|ZP_01114109.1| predicted GTPase [Reinekea blandensis MED297]
gi|88778625|gb|EAR09816.1| predicted GTPase [Reinekea sp. MED297]
Length = 207
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 86/145 (59%), Gaps = 1/145 (0%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A+F+ S+ + CP+D E A GRSN GKSS LN+L R KLA TSKTPG+TQ +N F
Sbjct: 8 AQFLTSAAKFSQCPTDTGAEVAFAGRSNAGKSSALNALTRNSKLARTSKTPGRTQLLNFF 67
Query: 168 RI-NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
+ +D LVDLPGYGYA R ++ DW++ +Y R +L + L++D P D
Sbjct: 68 TLSSDEHRLVDLPGYGYAKVNRNMKQDWEEHIGEYLAERLSLRGLVLVMDIRHPMTEFDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKK 251
W + ++P+ + TK DK K+
Sbjct: 128 MIIDWAVETEMPLLALLTKADKLKR 152
>gi|429117433|ref|ZP_19178351.1| GTP-binding protein EngB [Cronobacter sakazakii 701]
gi|426320562|emb|CCK04464.1| GTP-binding protein EngB [Cronobacter sakazakii 701]
Length = 222
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 92/167 (55%), Gaps = 5/167 (2%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 19 QTHFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 78
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R L + +L+D P K +D
Sbjct: 79 FEVADGKRLVDLPGYGYAEVPEEMKRKWKPYRGEYLEKRLCLKGLVVLMDIRHPLKDLDQ 138
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF 273
+ W + IP+ ++ TK DK +G ++ + LN +E + F
Sbjct: 139 QMIEWAVDSGIPVLVLLTKADKL---ASGARKAQ--LNMVREAVIAF 180
>gi|292670223|ref|ZP_06603649.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas noxia
ATCC 43541]
gi|292648175|gb|EFF66147.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas noxia
ATCC 43541]
Length = 202
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 112/205 (54%), Gaps = 17/205 (8%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +A ++ S+VR + P +G P A +GRSNVGKSSL+NSL R ++LA S PGKTQ I
Sbjct: 2 ITKAVYLASAVRRDQYPEEGRPAVAFIGRSNVGKSSLINSLTRIRQLARVSSKPGKTQTI 61
Query: 165 NHF----RIND-----SWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLI 215
N + RI+ S +LVDLPGYGYA A R+ R W KF ++Y L + L V LL+
Sbjct: 62 NFYELLLRIDGGAERYSVHLVDLPGYGYAKAARDSRKVWAKFIEEYLLYAAELRFVCLLL 121
Query: 216 DASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQ 275
D D SWL ++ IP+ ++ TK DK + + + + Q +
Sbjct: 122 DIRHTPMESDRRMFSWLVEHNIPVLVIATKSDKIGRNARRAR-----IAEIQRSLGVPEL 176
Query: 276 TAPPWIMTSSVTNQGRDEILLHMAQ 300
T P+ +S N+GR E+L M +
Sbjct: 177 TVLPY---ASPKNEGRSELLDVMKE 198
>gi|410456501|ref|ZP_11310361.1| GTP-binding protein YsxC [Bacillus bataviensis LMG 21833]
gi|409927885|gb|EKN65010.1| GTP-binding protein YsxC [Bacillus bataviensis LMG 21833]
Length = 193
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 104/190 (54%), Gaps = 7/190 (3%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V ++ V S+V+ + P LPEFAL GRSNVGKSS +N ++ RK LA S PGKTQ
Sbjct: 2 KVVSSDIVISAVKPDQYPETELPEFALAGRSNVGKSSFINKMLNRKGLARISSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IN+ + VD+PGYGYA + R W K + YF +R L + L++D P
Sbjct: 62 LNFYLINEILHFVDVPGYGYAKVSKTERAAWGKMIETYFTSREQLRAAVLIVDLRHPPTT 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
D+ +L +IP ++ TK DK K K +++L +E + +M
Sbjct: 122 DDVMMYDFLKHYEIPCVIIATKADKIPKGK-----WQKHLKVTRETLD--LDKNDHLVMF 174
Query: 284 SSVTNQGRDE 293
SS T +G+D+
Sbjct: 175 SSETGEGKDQ 184
>gi|365922026|ref|ZP_09446267.1| ribosome biogenesis GTP-binding protein YsxC [Cardiobacterium
valvarum F0432]
gi|364575033|gb|EHM52455.1| ribosome biogenesis GTP-binding protein YsxC [Cardiobacterium
valvarum F0432]
Length = 203
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 84/148 (56%), Gaps = 1/148 (0%)
Query: 102 DAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKT 161
+++ QA F S+ R P D E A GRSN GKSS LN+L +K LA S+TPG+T
Sbjct: 2 NSRYQQAVFAFSANREAQFPPDSRVEIAFAGRSNAGKSSALNTLTNQKTLARVSRTPGRT 61
Query: 162 QCINHFRINDS-WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIP 220
Q IN+F + D+ +LVDLPGYGYA P ++R W Y L R L V LL+D P
Sbjct: 62 QLINYFALPDAGCFLVDLPGYGYAEVPEQVRAHWQALLGRYLLQREVLRGVVLLMDIRHP 121
Query: 221 AKPIDLEYASWLGQNQIPMTLVFTKCDK 248
K +D+ + Q+P ++ TK DK
Sbjct: 122 MKELDIRMLECCAERQLPAHVLLTKADK 149
>gi|402836327|ref|ZP_10884867.1| ribosome biogenesis GTP-binding protein YsxC [Mogibacterium sp.
CM50]
gi|402271423|gb|EJU20667.1| ribosome biogenesis GTP-binding protein YsxC [Mogibacterium sp.
CM50]
Length = 198
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 83/145 (57%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
Q+++AE +V+ P +G+PE A GRSNVGKSSLLN L RRK LA S +PGKT+
Sbjct: 2 QISRAEIEAVAVKAAQYPDEGVPEIAFAGRSNVGKSSLLNLLTRRKSLARVSGSPGKTRT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN +RIND + +VDLPGYGYA + W + Y NR L+ V L+D
Sbjct: 62 INFYRINDEFRIVDLPGYGYARVSKSESEKWGTMIEGYLENRECLLKVIQLVDIRHKPST 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK 248
D++ +L + +V TK DK
Sbjct: 122 QDVQMYEYLKYYNLDGIVVATKADK 146
>gi|417829953|ref|ZP_12476493.1| cell division protein putative checkpoint GTPase [Shigella flexneri
J1713]
gi|419367702|ref|ZP_13908849.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC13E]
gi|419804623|ref|ZP_14329777.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
AI27]
gi|425117490|ref|ZP_18519260.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
8.0566]
gi|335573635|gb|EGM59986.1| cell division protein putative checkpoint GTPase [Shigella flexneri
J1713]
gi|378209436|gb|EHX69809.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC13E]
gi|384472341|gb|EIE56398.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
AI27]
gi|408562764|gb|EKK38916.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
8.0566]
Length = 207
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 5 QTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 64
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 65 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 124
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT-SS 285
+ W + I + ++ TK DK +G ++ + LN +E + F + T SS
Sbjct: 125 QMIEWAVDSNIAVLVLLTKADKL---ASGARKAQ--LNMVREAVLAF--NGDVQVETFSS 177
Query: 286 VTNQGRDEI 294
+ QG D++
Sbjct: 178 LKKQGVDKL 186
>gi|145698334|ref|NP_418301.3| GTP-binding protein required for normal cell division [Escherichia
coli str. K-12 substr. MG1655]
gi|157156230|ref|YP_001465345.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
E24377A]
gi|157163335|ref|YP_001460653.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli HS]
gi|161486045|ref|NP_756667.2| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
CFT073]
gi|161950010|ref|YP_405310.2| ribosome biogenesis GTP-binding protein YsxC [Shigella dysenteriae
Sd197]
gi|161986408|ref|YP_312789.2| ribosome biogenesis GTP-binding protein YsxC [Shigella sonnei
Ss046]
gi|162138322|ref|YP_543397.2| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
UTI89]
gi|170022121|ref|YP_001727075.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli ATCC
8739]
gi|170683684|ref|YP_001746193.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
SMS-3-5]
gi|187732245|ref|YP_001882562.1| ribosome biogenesis GTP-binding protein YsxC [Shigella boydii CDC
3083-94]
gi|188492392|ref|ZP_02999662.1| GTPase family protein [Escherichia coli 53638]
gi|191169445|ref|ZP_03031182.1| putative GTP-binding protein EngB [Escherichia coli B7A]
gi|191173902|ref|ZP_03035422.1| putative GTP-binding protein EngB [Escherichia coli F11]
gi|193063965|ref|ZP_03045051.1| putative GTP-binding protein EngB [Escherichia coli E22]
gi|193068077|ref|ZP_03049042.1| putative GTP-binding protein EngB [Escherichia coli E110019]
gi|215489198|ref|YP_002331629.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O127:H6 str. E2348/69]
gi|222158572|ref|YP_002558711.1| GTP-binding protein engB [Escherichia coli LF82]
gi|237702894|ref|ZP_04533375.1| GTPase EngB [Escherichia sp. 3_2_53FAA]
gi|238902932|ref|YP_002928728.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
BW2952]
gi|253775500|ref|YP_003038331.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|260846367|ref|YP_003224145.1| GTP-binding protein [Escherichia coli O103:H2 str. 12009]
gi|260857737|ref|YP_003231628.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O26:H11 str. 11368]
gi|260870581|ref|YP_003236983.1| GTP-binding protein [Escherichia coli O111:H- str. 11128]
gi|293407484|ref|ZP_06651403.1| GTP-binding protein engB [Escherichia coli FVEC1412]
gi|293413299|ref|ZP_06655960.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
B354]
gi|293417325|ref|ZP_06659949.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
B185]
gi|297517721|ref|ZP_06936107.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
OP50]
gi|298383227|ref|ZP_06992820.1| GTP-binding protein engB [Escherichia coli FVEC1302]
gi|301027904|ref|ZP_07191196.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
196-1]
gi|306813870|ref|ZP_07448046.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
NC101]
gi|307314015|ref|ZP_07593629.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli W]
gi|309783772|ref|ZP_07678418.1| conserved hypothetical protein [Shigella dysenteriae 1617]
gi|312969392|ref|ZP_07783594.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|331660414|ref|ZP_08361348.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TA206]
gi|332282740|ref|ZP_08395153.1| GTPase EngB [Shigella sp. D9]
gi|378715225|ref|YP_005280118.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KO11FL]
gi|383181121|ref|YP_005459126.1| GTP-binding protein YsxC [Shigella sonnei 53G]
gi|386282475|ref|ZP_10060126.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia sp.
4_1_40B]
gi|386597611|ref|YP_006094011.1| GTP-binding protein HSR1-like protein [Escherichia coli DH1]
gi|386601907|ref|YP_006103413.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
IHE3034]
gi|386606457|ref|YP_006112757.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
UM146]
gi|386611233|ref|YP_006126719.1| GTP-binding protein [Escherichia coli W]
gi|386616685|ref|YP_006136351.1| hypothetical protein UMNK88_4695 [Escherichia coli UMNK88]
gi|386621501|ref|YP_006141081.1| GTP-binding protein EngB [Escherichia coli NA114]
gi|386626767|ref|YP_006146495.1| GTP-binding protein required for normal cell division [Escherichia
coli O7:K1 str. CE10]
gi|386711767|ref|YP_006175488.1| cell division protein; predicted checkpoint GTPase [Escherichia
coli W]
gi|387609666|ref|YP_006098522.1| GTP-binding protein [Escherichia coli 042]
gi|387619173|ref|YP_006122195.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O83:H1 str. NRG 857C]
gi|387623509|ref|YP_006131137.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli DH1]
gi|407466865|ref|YP_006786693.1| GTP-binding protein YsxC [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407484409|ref|YP_006781559.1| GTP-binding protein YsxC [Escherichia coli O104:H4 str. 2011C-3493]
gi|410484955|ref|YP_006772501.1| GTP-binding protein YsxC [Escherichia coli O104:H4 str.
2009EL-2050]
gi|414578746|ref|ZP_11435907.1| putative GTP-binding protein EngB [Shigella sonnei 3233-85]
gi|415786133|ref|ZP_11493379.1| hypothetical protein ECEPECA14_2976 [Escherichia coli EPECa14]
gi|415838360|ref|ZP_11520338.1| hypothetical protein ECRN5871_2081 [Escherichia coli RN587/1]
gi|416269220|ref|ZP_11642392.1| GTP-binding protein EngB [Shigella dysenteriae CDC 74-1112]
gi|416279849|ref|ZP_11644994.1| GTP-binding protein EngB [Shigella boydii ATCC 9905]
gi|416334846|ref|ZP_11671588.1| GTP-binding protein EngB [Escherichia coli WV_060327]
gi|416345288|ref|ZP_11678881.1| GTP-binding protein EngB [Escherichia coli EC4100B]
gi|416900468|ref|ZP_11929713.1| hypothetical protein ECSTEC7V_4574 [Escherichia coli STEC_7v]
gi|417087884|ref|ZP_11954703.1| hypothetical protein i01_05525 [Escherichia coli cloneA_i1]
gi|417117073|ref|ZP_11967934.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
1.2741]
gi|417121893|ref|ZP_11971266.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
97.0246]
gi|417131675|ref|ZP_11976460.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
5.0588]
gi|417157335|ref|ZP_11994959.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0497]
gi|417161138|ref|ZP_11997471.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0741]
gi|417175648|ref|ZP_12005444.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
3.2608]
gi|417185543|ref|ZP_12010944.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
93.0624]
gi|417201965|ref|ZP_12018215.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
4.0522]
gi|417208241|ref|ZP_12020260.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
JB1-95]
gi|417221751|ref|ZP_12025191.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.154]
gi|417227733|ref|ZP_12029491.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
5.0959]
gi|417241829|ref|ZP_12037586.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
9.0111]
gi|417250104|ref|ZP_12041888.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
4.0967]
gi|417265189|ref|ZP_12052568.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
2.3916]
gi|417269399|ref|ZP_12056759.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
3.3884]
gi|417273185|ref|ZP_12060532.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
2.4168]
gi|417279337|ref|ZP_12066647.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
3.2303]
gi|417281241|ref|ZP_12068541.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
3003]
gi|417288015|ref|ZP_12075301.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW07793]
gi|417293452|ref|ZP_12080731.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli B41]
gi|417295702|ref|ZP_12082949.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
900105 (10e)]
gi|417583484|ref|ZP_12234281.1| hypothetical protein ECSTECB2F1_4211 [Escherichia coli STEC_B2F1]
gi|417589004|ref|ZP_12239764.1| hypothetical protein ECSTECC16502_4700 [Escherichia coli
STEC_C165-02]
gi|417594331|ref|ZP_12245017.1| hypothetical protein EC253486_4973 [Escherichia coli 2534-86]
gi|417604766|ref|ZP_12255327.1| hypothetical protein ECSTEC94C_4618 [Escherichia coli STEC_94C]
gi|417610621|ref|ZP_12261110.1| hypothetical protein ECSTECDG1313_5060 [Escherichia coli
STEC_DG131-3]
gi|417615525|ref|ZP_12265972.1| hypothetical protein ECSTECEH250_4634 [Escherichia coli STEC_EH250]
gi|417636819|ref|ZP_12287023.1| hypothetical protein ECSTECS1191_4797 [Escherichia coli STEC_S1191]
gi|417641883|ref|ZP_12292005.1| hypothetical protein ECTX1999_4616 [Escherichia coli TX1999]
gi|417669453|ref|ZP_12318988.1| hypothetical protein ECSTECO31_4316 [Escherichia coli STEC_O31]
gi|417674861|ref|ZP_12324291.1| hypothetical protein SD15574_4569 [Shigella dysenteriae 155-74]
gi|417714585|ref|ZP_12363538.1| hypothetical protein SFK272_4369 [Shigella flexneri K-272]
gi|417719504|ref|ZP_12368386.1| hypothetical protein SFK227_4300 [Shigella flexneri K-227]
gi|417758308|ref|ZP_12406367.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC2B]
gi|417807550|ref|ZP_12454477.1| GTP-binding protein YsxC [Escherichia coli O104:H4 str. LB226692]
gi|417835289|ref|ZP_12481728.1| GTP-binding protein YsxC [Escherichia coli O104:H4 str. 01-09591]
gi|417867767|ref|ZP_12512801.1| hypothetical protein C22711_4692 [Escherichia coli O104:H4 str.
C227-11]
gi|417944986|ref|ZP_12588224.1| GTP-binding protein YsxC [Escherichia coli XH140A]
gi|417976884|ref|ZP_12617674.1| GTP-binding protein YsxC [Escherichia coli XH001]
gi|418269934|ref|ZP_12888111.1| cell division protein putative checkpoint GTPase [Shigella sonnei
str. Moseley]
gi|418305491|ref|ZP_12917285.1| hypothetical protein UMNF18_4802 [Escherichia coli UMNF18]
gi|418943607|ref|ZP_13496779.1| GTP-binding protein YsxC [Escherichia coli O157:H43 str. T22]
gi|418999422|ref|ZP_13546996.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC1A]
gi|419004686|ref|ZP_13552192.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC1B]
gi|419010367|ref|ZP_13557773.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC1C]
gi|419016071|ref|ZP_13563403.1| putative GTP-binding protein EngB [Escherichia coli DEC1D]
gi|419020996|ref|ZP_13568291.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC1E]
gi|419026449|ref|ZP_13573659.1| putative GTP-binding protein EngB [Escherichia coli DEC2A]
gi|419031600|ref|ZP_13578737.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC2C]
gi|419037249|ref|ZP_13584318.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC2D]
gi|419042295|ref|ZP_13589308.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC2E]
gi|419144970|ref|ZP_13689695.1| putative GTP-binding protein EngB [Escherichia coli DEC6A]
gi|419150872|ref|ZP_13695516.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC6B]
gi|419156377|ref|ZP_13700929.1| putative GTP-binding protein EngB [Escherichia coli DEC6C]
gi|419161734|ref|ZP_13706222.1| putative GTP-binding protein EngB [Escherichia coli DEC6D]
gi|419166826|ref|ZP_13711272.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC6E]
gi|419172820|ref|ZP_13716690.1| putative GTP-binding protein EngB [Escherichia coli DEC7A]
gi|419177613|ref|ZP_13721418.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC7B]
gi|419183382|ref|ZP_13726986.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC7C]
gi|419188996|ref|ZP_13732497.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC7D]
gi|419193932|ref|ZP_13737369.1| putative GTP-binding protein EngB [Escherichia coli DEC7E]
gi|419199650|ref|ZP_13742936.1| putative GTP-binding protein EngB [Escherichia coli DEC8A]
gi|419206040|ref|ZP_13749192.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC8B]
gi|419212386|ref|ZP_13755447.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC8C]
gi|419218361|ref|ZP_13761346.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC8D]
gi|419223965|ref|ZP_13766873.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC8E]
gi|419229260|ref|ZP_13772096.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC9A]
gi|419235138|ref|ZP_13777900.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC9B]
gi|419240112|ref|ZP_13782816.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC9C]
gi|419245963|ref|ZP_13788591.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC9D]
gi|419251538|ref|ZP_13794103.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC9E]
gi|419257345|ref|ZP_13799843.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC10A]
gi|419263447|ref|ZP_13805853.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC10B]
gi|419269446|ref|ZP_13811788.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC10C]
gi|419274944|ref|ZP_13817230.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC10D]
gi|419280387|ref|ZP_13822627.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC10E]
gi|419286563|ref|ZP_13828723.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC10F]
gi|419292078|ref|ZP_13834159.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC11A]
gi|419297357|ref|ZP_13839390.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC11B]
gi|419302949|ref|ZP_13844938.1| putative GTP-binding protein EngB [Escherichia coli DEC11C]
gi|419308894|ref|ZP_13850781.1| putative GTP-binding protein EngB [Escherichia coli DEC11D]
gi|419313859|ref|ZP_13855713.1| putative GTP-binding protein EngB [Escherichia coli DEC11E]
gi|419319358|ref|ZP_13861151.1| putative GTP-binding protein EngB [Escherichia coli DEC12A]
gi|419325303|ref|ZP_13866988.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC12B]
gi|419331578|ref|ZP_13873168.1| putative GTP-binding protein EngB [Escherichia coli DEC12C]
gi|419336744|ref|ZP_13878257.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC12D]
gi|419342446|ref|ZP_13883897.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC12E]
gi|419347641|ref|ZP_13889006.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC13A]
gi|419357578|ref|ZP_13898822.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC13C]
gi|419362548|ref|ZP_13903752.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC13D]
gi|419372411|ref|ZP_13913518.1| putative GTP-binding protein EngB [Escherichia coli DEC14A]
gi|419377991|ref|ZP_13919004.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC14B]
gi|419383384|ref|ZP_13924322.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC14C]
gi|419388620|ref|ZP_13929483.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC14D]
gi|419393811|ref|ZP_13934610.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC15A]
gi|419399257|ref|ZP_13940015.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC15B]
gi|419409668|ref|ZP_13950348.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC15D]
gi|419415226|ref|ZP_13955855.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC15E]
gi|419702722|ref|ZP_14230309.1| GTP-binding protein YsxC [Escherichia coli SCI-07]
gi|419812010|ref|ZP_14336881.1| GTP-binding protein YsxC [Escherichia coli O32:H37 str. P4]
gi|419866527|ref|ZP_14388886.1| GTP-binding protein YsxC [Escherichia coli O103:H25 str. CVM9340]
gi|419871484|ref|ZP_14393540.1| GTP-binding protein YsxC [Escherichia coli O103:H2 str. CVM9450]
gi|419876841|ref|ZP_14398511.1| GTP-binding protein YsxC [Escherichia coli O111:H11 str. CVM9534]
gi|419879978|ref|ZP_14401395.1| GTP-binding protein YsxC [Escherichia coli O111:H11 str. CVM9545]
gi|419895922|ref|ZP_14415695.1| GTP-binding protein YsxC [Escherichia coli O111:H8 str. CVM9574]
gi|419904105|ref|ZP_14423112.1| GTP-binding protein YsxC [Escherichia coli O26:H11 str. CVM9942]
gi|419909426|ref|ZP_14428005.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O26:H11 str. CVM10026]
gi|419911929|ref|ZP_14430390.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli KD1]
gi|419921132|ref|ZP_14439227.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli KD2]
gi|419926188|ref|ZP_14443989.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
541-15]
gi|419927718|ref|ZP_14445451.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
541-1]
gi|419938066|ref|ZP_14454909.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli 75]
gi|419944323|ref|ZP_14460827.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
HM605]
gi|419947805|ref|ZP_14464120.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
CUMT8]
gi|420088855|ref|ZP_14600714.1| GTP-binding protein YsxC [Escherichia coli O111:H8 str. CVM9602]
gi|420097574|ref|ZP_14608870.1| GTP-binding protein YsxC [Escherichia coli O111:H8 str. CVM9634]
gi|420104969|ref|ZP_14615561.1| GTP-binding protein YsxC [Escherichia coli O111:H11 str. CVM9455]
gi|420111694|ref|ZP_14621517.1| GTP-binding protein YsxC [Escherichia coli O111:H11 str. CVM9553]
gi|420116412|ref|ZP_14625822.1| GTP-binding protein YsxC [Escherichia coli O26:H11 str. CVM10021]
gi|420122743|ref|ZP_14631653.1| GTP-binding protein YsxC [Escherichia coli O26:H11 str. CVM10030]
gi|420128757|ref|ZP_14637306.1| GTP-binding protein YsxC [Escherichia coli O26:H11 str. CVM10224]
gi|420134726|ref|ZP_14642828.1| GTP-binding protein YsxC [Escherichia coli O26:H11 str. CVM9952]
gi|420349800|ref|ZP_14851168.1| putative GTP-binding protein EngB [Shigella boydii 965-58]
gi|420361305|ref|ZP_14862245.1| putative GTP-binding protein EngB [Shigella sonnei 3226-85]
gi|420382723|ref|ZP_14882154.1| putative GTP-binding protein EngB [Shigella dysenteriae 225-75]
gi|421684780|ref|ZP_16124562.1| cell division protein putative checkpoint GTPase [Shigella flexneri
1485-80]
gi|421777455|ref|ZP_16214051.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
AD30]
gi|422334908|ref|ZP_16415912.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
4_1_47FAA]
gi|422751913|ref|ZP_16805819.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H252]
gi|422757342|ref|ZP_16811162.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H263]
gi|422764509|ref|ZP_16818258.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
E1167]
gi|422768943|ref|ZP_16822666.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
E1520]
gi|422773744|ref|ZP_16827426.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
E482]
gi|422778621|ref|ZP_16832268.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H120]
gi|422784555|ref|ZP_16837334.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW10509]
gi|422789070|ref|ZP_16841803.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H489]
gi|422793705|ref|ZP_16846399.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TA007]
gi|422803143|ref|ZP_16851633.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
M863]
gi|422819010|ref|ZP_16867222.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
M919]
gi|422832066|ref|ZP_16880191.1| GTP-binding protein engB [Escherichia coli B093]
gi|422841915|ref|ZP_16889883.1| GTP-binding protein engB [Escherichia coli H397]
gi|422963565|ref|ZP_16973179.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H494]
gi|422990125|ref|ZP_16980897.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. C227-11]
gi|422997022|ref|ZP_16987784.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. C236-11]
gi|423002118|ref|ZP_16992869.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 09-7901]
gi|423005773|ref|ZP_16996518.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 04-8351]
gi|423012334|ref|ZP_17003066.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-3677]
gi|423021565|ref|ZP_17012270.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4404]
gi|423026722|ref|ZP_17017416.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4522]
gi|423032550|ref|ZP_17023236.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4623]
gi|423035425|ref|ZP_17026101.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|423040546|ref|ZP_17031214.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|423047231|ref|ZP_17037889.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|423055769|ref|ZP_17044575.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|423057773|ref|ZP_17046571.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|423703381|ref|ZP_17677813.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H730]
gi|423708168|ref|ZP_17682548.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
B799]
gi|424753468|ref|ZP_18181423.1| GTP-binding protein YsxC [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424759276|ref|ZP_18186944.1| GTP-binding protein YsxC [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424768924|ref|ZP_18196162.1| GTP-binding protein YsxC [Escherichia coli O111:H8 str.
CFSAN001632]
gi|425122207|ref|ZP_18523875.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
8.0569]
gi|425285729|ref|ZP_18676740.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW00353]
gi|425307670|ref|ZP_18697332.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli N1]
gi|425382206|ref|ZP_18766184.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1865]
gi|429721606|ref|ZP_19256519.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429773682|ref|ZP_19305694.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02030]
gi|429778866|ref|ZP_19310830.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429782701|ref|ZP_19314624.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02092]
gi|429788094|ref|ZP_19319979.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02093]
gi|429794533|ref|ZP_19326372.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02281]
gi|429800493|ref|ZP_19332280.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02318]
gi|429804105|ref|ZP_19335860.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02913]
gi|429808753|ref|ZP_19340467.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-03439]
gi|429814695|ref|ZP_19346363.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-04080]
gi|429819655|ref|ZP_19351283.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-03943]
gi|429905974|ref|ZP_19371948.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429910108|ref|ZP_19376068.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-9941]
gi|429916007|ref|ZP_19381951.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429921056|ref|ZP_19386981.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429926862|ref|ZP_19392772.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429930793|ref|ZP_19396692.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429937335|ref|ZP_19403220.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429943014|ref|ZP_19408885.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429945694|ref|ZP_19411553.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429953258|ref|ZP_19419101.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429956602|ref|ZP_19422432.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec12-0466]
gi|432355895|ref|ZP_19599154.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE2]
gi|432360335|ref|ZP_19603545.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE4]
gi|432365135|ref|ZP_19608287.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE5]
gi|432379094|ref|ZP_19622074.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE12]
gi|432383778|ref|ZP_19626701.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE15]
gi|432384793|ref|ZP_19627700.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE16]
gi|432394530|ref|ZP_19637345.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE21]
gi|432395268|ref|ZP_19638065.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE25]
gi|432404260|ref|ZP_19647001.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE26]
gi|432408950|ref|ZP_19651650.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE28]
gi|432414175|ref|ZP_19656825.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE39]
gi|432419383|ref|ZP_19661971.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE44]
gi|432424283|ref|ZP_19666818.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE178]
gi|432428527|ref|ZP_19671005.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE181]
gi|432434137|ref|ZP_19676556.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE187]
gi|432438838|ref|ZP_19681213.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE188]
gi|432443412|ref|ZP_19685742.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE189]
gi|432448555|ref|ZP_19690849.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE191]
gi|432459023|ref|ZP_19701195.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE201]
gi|432463228|ref|ZP_19705357.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE204]
gi|432468219|ref|ZP_19710294.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE205]
gi|432473233|ref|ZP_19715267.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE206]
gi|432478223|ref|ZP_19720206.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE208]
gi|432483273|ref|ZP_19725219.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE210]
gi|432487614|ref|ZP_19729520.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE212]
gi|432491695|ref|ZP_19733552.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE213]
gi|432493132|ref|ZP_19734960.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE214]
gi|432506773|ref|ZP_19748489.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE220]
gi|432516270|ref|ZP_19753483.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE224]
gi|432520076|ref|ZP_19757253.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE228]
gi|432526354|ref|ZP_19763464.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE230]
gi|432528716|ref|ZP_19765786.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE233]
gi|432531650|ref|ZP_19768671.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE234]
gi|432540244|ref|ZP_19777133.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE235]
gi|432545698|ref|ZP_19782519.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE236]
gi|432551176|ref|ZP_19787923.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE237]
gi|432556113|ref|ZP_19792826.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE47]
gi|432561149|ref|ZP_19797799.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE49]
gi|432566242|ref|ZP_19802796.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE51]
gi|432571155|ref|ZP_19807658.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE53]
gi|432576126|ref|ZP_19812592.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE55]
gi|432578132|ref|ZP_19814576.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE56]
gi|432585408|ref|ZP_19821797.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE57]
gi|432590335|ref|ZP_19826684.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE58]
gi|432595134|ref|ZP_19831442.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE60]
gi|432598704|ref|ZP_19834978.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE62]
gi|432604691|ref|ZP_19840916.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE66]
gi|432605318|ref|ZP_19841526.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE67]
gi|432613884|ref|ZP_19850039.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE72]
gi|432619181|ref|ZP_19855277.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE75]
gi|432624232|ref|ZP_19860243.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE76]
gi|432629481|ref|ZP_19865444.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE77]
gi|432633808|ref|ZP_19869723.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE80]
gi|432634763|ref|ZP_19870659.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE81]
gi|432643460|ref|ZP_19879279.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE83]
gi|432648552|ref|ZP_19884335.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE86]
gi|432653534|ref|ZP_19889270.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE87]
gi|432658117|ref|ZP_19893812.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE93]
gi|432663106|ref|ZP_19898733.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE111]
gi|432663582|ref|ZP_19899190.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE116]
gi|432672951|ref|ZP_19908467.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE119]
gi|432677038|ref|ZP_19912477.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE142]
gi|432682656|ref|ZP_19918006.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE143]
gi|432687689|ref|ZP_19922975.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE156]
gi|432689187|ref|ZP_19924451.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE161]
gi|432701396|ref|ZP_19936538.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE169]
gi|432706591|ref|ZP_19941683.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE171]
gi|432708273|ref|ZP_19943347.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE6]
gi|432715738|ref|ZP_19950761.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE8]
gi|432716491|ref|ZP_19951503.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE9]
gi|432725346|ref|ZP_19960258.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE17]
gi|432729954|ref|ZP_19964825.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE18]
gi|432734633|ref|ZP_19969453.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE45]
gi|432734905|ref|ZP_19969718.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE42]
gi|432743643|ref|ZP_19978355.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE23]
gi|432747855|ref|ZP_19982515.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE43]
gi|432752314|ref|ZP_19986890.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE29]
gi|432756838|ref|ZP_19991380.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE22]
gi|432761718|ref|ZP_19996204.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE46]
gi|432762721|ref|ZP_19997181.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE48]
gi|432768237|ref|ZP_20002626.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE50]
gi|432772637|ref|ZP_20006946.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE54]
gi|432781043|ref|ZP_20015257.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE59]
gi|432781202|ref|ZP_20015411.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE63]
gi|432789907|ref|ZP_20024032.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE65]
gi|432795122|ref|ZP_20029192.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE78]
gi|432796633|ref|ZP_20030665.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE79]
gi|432799772|ref|ZP_20033772.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE84]
gi|432808105|ref|ZP_20042016.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE91]
gi|432811607|ref|ZP_20045461.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE101]
gi|432817651|ref|ZP_20051400.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE115]
gi|432818671|ref|ZP_20052391.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE118]
gi|432824803|ref|ZP_20058465.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE123]
gi|432829477|ref|ZP_20063090.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE135]
gi|432836871|ref|ZP_20070380.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE136]
gi|432841720|ref|ZP_20075173.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE140]
gi|432847118|ref|ZP_20079612.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE141]
gi|432866922|ref|ZP_20089073.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE146]
gi|432878271|ref|ZP_20095681.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE154]
gi|432882610|ref|ZP_20098332.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE158]
gi|432891501|ref|ZP_20104192.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE165]
gi|432901530|ref|ZP_20111549.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE192]
gi|432907726|ref|ZP_20116086.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE194]
gi|432915528|ref|ZP_20120783.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE190]
gi|432931656|ref|ZP_20131635.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE184]
gi|432940726|ref|ZP_20138600.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE183]
gi|432943552|ref|ZP_20140387.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE196]
gi|432951138|ref|ZP_20144858.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE197]
gi|432964713|ref|ZP_20153738.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE202]
gi|432965622|ref|ZP_20154543.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE203]
gi|432969456|ref|ZP_20158363.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE207]
gi|432976104|ref|ZP_20164935.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE209]
gi|432987727|ref|ZP_20176436.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE215]
gi|432988375|ref|ZP_20177052.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE217]
gi|432993084|ref|ZP_20181714.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE218]
gi|433002281|ref|ZP_20190796.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE223]
gi|433002783|ref|ZP_20191290.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE227]
gi|433010083|ref|ZP_20198492.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE229]
gi|433016202|ref|ZP_20204524.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE104]
gi|433021117|ref|ZP_20209191.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE105]
gi|433025791|ref|ZP_20213754.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE106]
gi|433030823|ref|ZP_20218665.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE109]
gi|433040898|ref|ZP_20228481.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE113]
gi|433045394|ref|ZP_20232865.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE117]
gi|433050333|ref|ZP_20237649.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE120]
gi|433055491|ref|ZP_20242641.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE122]
gi|433060406|ref|ZP_20247434.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE124]
gi|433065333|ref|ZP_20252232.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE125]
gi|433070227|ref|ZP_20256986.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE128]
gi|433075167|ref|ZP_20261798.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE129]
gi|433080092|ref|ZP_20266605.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE131]
gi|433084809|ref|ZP_20271251.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE133]
gi|433089611|ref|ZP_20275965.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE137]
gi|433094255|ref|ZP_20280501.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE138]
gi|433103480|ref|ZP_20289546.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE145]
gi|433113156|ref|ZP_20299001.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE150]
gi|433117814|ref|ZP_20303590.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE153]
gi|433122498|ref|ZP_20308150.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE157]
gi|433127516|ref|ZP_20313053.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE160]
gi|433132439|ref|ZP_20317857.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE163]
gi|433137111|ref|ZP_20322432.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE166]
gi|433141589|ref|ZP_20326823.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE167]
gi|433146519|ref|ZP_20331646.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE168]
gi|433151541|ref|ZP_20336534.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE174]
gi|433156074|ref|ZP_20340995.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE176]
gi|433161017|ref|ZP_20345829.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE177]
gi|433165901|ref|ZP_20350622.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE179]
gi|433170896|ref|ZP_20355508.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE180]
gi|433175751|ref|ZP_20360252.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE232]
gi|433180736|ref|ZP_20365105.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE82]
gi|433185624|ref|ZP_20369854.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE85]
gi|433190688|ref|ZP_20374771.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE88]
gi|433195917|ref|ZP_20379881.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE90]
gi|433200645|ref|ZP_20384524.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE94]
gi|433205617|ref|ZP_20389356.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE95]
gi|433210034|ref|ZP_20393693.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE97]
gi|433214913|ref|ZP_20398483.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE99]
gi|442595827|ref|ZP_21013663.1| GTP-binding protein EngB [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|442598567|ref|ZP_21016327.1| GTP-binding protein EngB [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|442607183|ref|ZP_21021972.1| GTP-binding protein EngB [Escherichia coli Nissle 1917]
gi|443615340|ref|YP_007379196.1| GTP-binding protein YsxC [Escherichia coli APEC O78]
gi|450227602|ref|ZP_21897575.1| GTP-binding protein YsxC [Escherichia coli O08]
gi|450253060|ref|ZP_21902333.1| GTP-binding protein YsxC [Escherichia coli S17]
gi|67462332|sp|P0A6P7.1|ENGB_ECOLI RecName: Full=Probable GTP-binding protein EngB
gi|67462333|sp|P0A6P8.1|ENGB_ECOL6 RecName: Full=Probable GTP-binding protein EngB
gi|119369193|sp|Q1R448.2|ENGB_ECOUT RecName: Full=Probable GTP-binding protein EngB
gi|119369257|sp|Q32A36.2|ENGB_SHIDS RecName: Full=Probable GTP-binding protein EngB
gi|119369259|sp|Q3YVA8.2|ENGB_SHISS RecName: Full=Probable GTP-binding protein EngB
gi|166920110|sp|A7ZU66.1|ENGB_ECO24 RecName: Full=Probable GTP-binding protein EngB
gi|166920111|sp|A8A6W6.1|ENGB_ECOHS RecName: Full=Probable GTP-binding protein EngB
gi|189037177|sp|B1IW48.1|ENGB_ECOLC RecName: Full=Probable GTP-binding protein EngB
gi|226741188|sp|B1LMP7.1|ENGB_ECOSM RecName: Full=Probable GTP-binding protein EngB
gi|238691700|sp|B2TVL1.1|ENGB_SHIB3 RecName: Full=Probable GTP-binding protein EngB
gi|254783196|sp|B7UNI7.1|ENGB_ECO27 RecName: Full=Probable GTP-binding protein EngB
gi|259645892|sp|C5A033.1|ENGB_ECOBW RecName: Full=Probable GTP-binding protein EngB
gi|33358154|pdb|1PUI|A Chain A, Structure Of Engb Gtpase
gi|33358155|pdb|1PUI|B Chain B, Structure Of Engb Gtpase
gi|145693205|gb|AAC76862.3| GTP-binding protein required for normal cell division [Escherichia
coli str. K-12 substr. MG1655]
gi|157069015|gb|ABV08270.1| putative GTP-binding protein EngB [Escherichia coli HS]
gi|157078260|gb|ABV17968.1| putative GTP-binding protein EngB [Escherichia coli E24377A]
gi|169757049|gb|ACA79748.1| GTP-binding protein HSR1-related [Escherichia coli ATCC 8739]
gi|170521402|gb|ACB19580.1| putative GTP-binding protein EngB [Escherichia coli SMS-3-5]
gi|187429237|gb|ACD08511.1| putative GTP-binding protein EngB [Shigella boydii CDC 3083-94]
gi|188487591|gb|EDU62694.1| GTPase family protein [Escherichia coli 53638]
gi|190900513|gb|EDV60325.1| putative GTP-binding protein EngB [Escherichia coli B7A]
gi|190905860|gb|EDV65479.1| putative GTP-binding protein EngB [Escherichia coli F11]
gi|192929430|gb|EDV83038.1| putative GTP-binding protein EngB [Escherichia coli E22]
gi|192958697|gb|EDV89135.1| putative GTP-binding protein EngB [Escherichia coli E110019]
gi|215267270|emb|CAS11719.1| GTP-binding protein [Escherichia coli O127:H6 str. E2348/69]
gi|222035577|emb|CAP78322.1| GTP-binding protein engB [Escherichia coli LF82]
gi|226902831|gb|EEH89090.1| GTPase EngB [Escherichia sp. 3_2_53FAA]
gi|238861392|gb|ACR63390.1| GTP-binding protein [Escherichia coli BW2952]
gi|253326544|gb|ACT31146.1| GTP-binding protein HSR1-related [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|257756386|dbj|BAI27888.1| GTP-binding protein [Escherichia coli O26:H11 str. 11368]
gi|257761514|dbj|BAI33011.1| GTP-binding protein [Escherichia coli O103:H2 str. 12009]
gi|257766937|dbj|BAI38432.1| GTP-binding protein [Escherichia coli O111:H- str. 11128]
gi|260451300|gb|ACX41722.1| GTP-binding protein HSR1-related protein [Escherichia coli DH1]
gi|284923966|emb|CBG37065.1| probable GTP-binding protein [Escherichia coli 042]
gi|291425401|gb|EFE98440.1| GTP-binding protein engB [Escherichia coli FVEC1412]
gi|291430845|gb|EFF03841.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
B185]
gi|291468047|gb|EFF10545.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
B354]
gi|294490765|gb|ADE89521.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
IHE3034]
gi|298276261|gb|EFI17781.1| GTP-binding protein engB [Escherichia coli FVEC1302]
gi|299878997|gb|EFI87208.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS
196-1]
gi|305852868|gb|EFM53315.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
NC101]
gi|306906332|gb|EFN36848.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli W]
gi|307628941|gb|ADN73245.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
UM146]
gi|308928355|gb|EFP73816.1| conserved hypothetical protein [Shigella dysenteriae 1617]
gi|312285939|gb|EFR13857.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|312948434|gb|ADR29261.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O83:H1 str. NRG 857C]
gi|315063150|gb|ADT77477.1| GTP-binding protein [Escherichia coli W]
gi|315138433|dbj|BAJ45592.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli DH1]
gi|320174863|gb|EFW49984.1| GTP-binding protein EngB [Shigella dysenteriae CDC 74-1112]
gi|320182136|gb|EFW57039.1| GTP-binding protein EngB [Shigella boydii ATCC 9905]
gi|320196912|gb|EFW71534.1| GTP-binding protein EngB [Escherichia coli WV_060327]
gi|320198936|gb|EFW73534.1| GTP-binding protein EngB [Escherichia coli EC4100B]
gi|323155159|gb|EFZ41346.1| hypothetical protein ECEPECA14_2976 [Escherichia coli EPECa14]
gi|323189711|gb|EFZ74990.1| hypothetical protein ECRN5871_2081 [Escherichia coli RN587/1]
gi|323380786|gb|ADX53054.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KO11FL]
gi|323934351|gb|EGB30764.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
E1520]
gi|323939085|gb|EGB35301.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
E482]
gi|323943760|gb|EGB39857.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H120]
gi|323949359|gb|EGB45248.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H252]
gi|323954360|gb|EGB50145.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H263]
gi|323959368|gb|EGB55029.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H489]
gi|323964212|gb|EGB59695.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
M863]
gi|323969731|gb|EGB65014.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TA007]
gi|323974267|gb|EGB69396.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW10509]
gi|324115641|gb|EGC09579.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
E1167]
gi|327250492|gb|EGE62200.1| hypothetical protein ECSTEC7V_4574 [Escherichia coli STEC_7v]
gi|331052363|gb|EGI24400.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TA206]
gi|332085127|gb|EGI90305.1| hypothetical protein SD15574_4569 [Shigella dysenteriae 155-74]
gi|332105092|gb|EGJ08438.1| GTPase EngB [Shigella sp. D9]
gi|332345854|gb|AEE59188.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|332998505|gb|EGK18103.1| hypothetical protein SFK272_4369 [Shigella flexneri K-272]
gi|333014000|gb|EGK33361.1| hypothetical protein SFK227_4300 [Shigella flexneri K-227]
gi|333972002|gb|AEG38807.1| GTP-binding protein EngB [Escherichia coli NA114]
gi|339417589|gb|AEJ59261.1| hypothetical protein UMNF18_4802 [Escherichia coli UMNF18]
gi|340731869|gb|EGR61008.1| GTP-binding protein YsxC [Escherichia coli O104:H4 str. 01-09591]
gi|340737808|gb|EGR72062.1| GTP-binding protein YsxC [Escherichia coli O104:H4 str. LB226692]
gi|341921056|gb|EGT70659.1| hypothetical protein C22711_4692 [Escherichia coli O104:H4 str.
C227-11]
gi|342363369|gb|EGU27478.1| GTP-binding protein YsxC [Escherichia coli XH140A]
gi|344193568|gb|EGV47648.1| GTP-binding protein YsxC [Escherichia coli XH001]
gi|345330626|gb|EGW63091.1| hypothetical protein ECSTECC16502_4700 [Escherichia coli
STEC_C165-02]
gi|345331438|gb|EGW63898.1| hypothetical protein EC253486_4973 [Escherichia coli 2534-86]
gi|345333510|gb|EGW65960.1| hypothetical protein ECSTECB2F1_4211 [Escherichia coli STEC_B2F1]
gi|345346871|gb|EGW79188.1| hypothetical protein ECSTEC94C_4618 [Escherichia coli STEC_94C]
gi|345352993|gb|EGW85230.1| hypothetical protein ECSTECDG1313_5060 [Escherichia coli
STEC_DG131-3]
gi|345357421|gb|EGW89616.1| hypothetical protein ECSTECEH250_4634 [Escherichia coli STEC_EH250]
gi|345384640|gb|EGX14501.1| hypothetical protein ECSTECS1191_4797 [Escherichia coli STEC_S1191]
gi|345389400|gb|EGX19205.1| hypothetical protein ECTX1999_4616 [Escherichia coli TX1999]
gi|349740503|gb|AEQ15209.1| GTP-binding protein required for normal cell division [Escherichia
coli O7:K1 str. CE10]
gi|354856875|gb|EHF17332.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. C236-11]
gi|354861192|gb|EHF21632.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. C227-11]
gi|354861484|gb|EHF21923.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 04-8351]
gi|354869898|gb|EHF30304.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 09-7901]
gi|354875827|gb|EHF36190.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-3677]
gi|354885106|gb|EHF45414.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4404]
gi|354888415|gb|EHF48672.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4522]
gi|354891933|gb|EHF52149.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4623]
gi|354903966|gb|EHF64062.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|354907493|gb|EHF67553.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|354909500|gb|EHF69531.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|354911777|gb|EHF71780.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|354919966|gb|EHF79903.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|355349372|gb|EHF98578.1| hypothetical protein i01_05525 [Escherichia coli cloneA_i1]
gi|371591669|gb|EHN80612.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H494]
gi|371603612|gb|EHN92263.1| GTP-binding protein engB [Escherichia coli H397]
gi|371615785|gb|EHO04171.1| GTP-binding protein engB [Escherichia coli B093]
gi|373244190|gb|EHP63680.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
4_1_47FAA]
gi|375321087|gb|EHS66960.1| GTP-binding protein YsxC [Escherichia coli O157:H43 str. T22]
gi|377838665|gb|EHU03775.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC1C]
gi|377838794|gb|EHU03903.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC1A]
gi|377841513|gb|EHU06578.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC1B]
gi|377852589|gb|EHU17505.1| putative GTP-binding protein EngB [Escherichia coli DEC1D]
gi|377855680|gb|EHU20545.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC1E]
gi|377857528|gb|EHU22377.1| putative GTP-binding protein EngB [Escherichia coli DEC2A]
gi|377870017|gb|EHU34711.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC2B]
gi|377871997|gb|EHU36651.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC2C]
gi|377873577|gb|EHU38210.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC2D]
gi|377885556|gb|EHU50050.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC2E]
gi|377988162|gb|EHV51341.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC6B]
gi|377988820|gb|EHV51991.1| putative GTP-binding protein EngB [Escherichia coli DEC6A]
gi|377991820|gb|EHV54969.1| putative GTP-binding protein EngB [Escherichia coli DEC6C]
gi|378003447|gb|EHV66489.1| putative GTP-binding protein EngB [Escherichia coli DEC6D]
gi|378005957|gb|EHV68948.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC6E]
gi|378009937|gb|EHV72885.1| putative GTP-binding protein EngB [Escherichia coli DEC7A]
gi|378020778|gb|EHV83510.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC7C]
gi|378023770|gb|EHV86439.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC7D]
gi|378028309|gb|EHV90928.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC7B]
gi|378034353|gb|EHV96918.1| putative GTP-binding protein EngB [Escherichia coli DEC7E]
gi|378042603|gb|EHW05050.1| putative GTP-binding protein EngB [Escherichia coli DEC8A]
gi|378043097|gb|EHW05535.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC8B]
gi|378047858|gb|EHW10215.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC8C]
gi|378057008|gb|EHW19244.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC8D]
gi|378060498|gb|EHW22688.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC8E]
gi|378068591|gb|EHW30689.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC9A]
gi|378073042|gb|EHW35096.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC9B]
gi|378079924|gb|EHW41892.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC9C]
gi|378086301|gb|EHW48179.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC9D]
gi|378089640|gb|EHW51482.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC9E]
gi|378097210|gb|EHW58969.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC10A]
gi|378102609|gb|EHW64285.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC10B]
gi|378107217|gb|EHW68839.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC10C]
gi|378113226|gb|EHW74797.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC10D]
gi|378124346|gb|EHW85755.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC10E]
gi|378124370|gb|EHW85778.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC11A]
gi|378125459|gb|EHW86859.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC10F]
gi|378137845|gb|EHW99107.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC11B]
gi|378143860|gb|EHX05041.1| putative GTP-binding protein EngB [Escherichia coli DEC11D]
gi|378145659|gb|EHX06816.1| putative GTP-binding protein EngB [Escherichia coli DEC11C]
gi|378154414|gb|EHX15488.1| putative GTP-binding protein EngB [Escherichia coli DEC11E]
gi|378161848|gb|EHX22822.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC12B]
gi|378164382|gb|EHX25327.1| putative GTP-binding protein EngB [Escherichia coli DEC12A]
gi|378165177|gb|EHX26114.1| putative GTP-binding protein EngB [Escherichia coli DEC12C]
gi|378179476|gb|EHX40202.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC12D]
gi|378182040|gb|EHX42695.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC13A]
gi|378182121|gb|EHX42775.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC12E]
gi|378195298|gb|EHX55797.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC13C]
gi|378197870|gb|EHX58345.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC13D]
gi|378212871|gb|EHX73191.1| putative GTP-binding protein EngB [Escherichia coli DEC14A]
gi|378214581|gb|EHX74887.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC14B]
gi|378223866|gb|EHX84076.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC14C]
gi|378227516|gb|EHX87687.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC14D]
gi|378234202|gb|EHX94281.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC15A]
gi|378239750|gb|EHX99729.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC15B]
gi|378250298|gb|EHY10203.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC15D]
gi|378254983|gb|EHY14842.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC15E]
gi|380346092|gb|EIA34393.1| GTP-binding protein YsxC [Escherichia coli SCI-07]
gi|383407459|gb|AFH13702.1| cell division protein; predicted checkpoint GTPase [Escherichia
coli W]
gi|385155229|gb|EIF17234.1| GTP-binding protein YsxC [Escherichia coli O32:H37 str. P4]
gi|385537438|gb|EIF84310.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
M919]
gi|385708229|gb|EIG45243.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
H730]
gi|385709081|gb|EIG46083.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
B799]
gi|386120524|gb|EIG69150.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia sp.
4_1_40B]
gi|386139617|gb|EIG80772.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
1.2741]
gi|386147968|gb|EIG94407.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
97.0246]
gi|386149529|gb|EIH00818.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
5.0588]
gi|386166085|gb|EIH32605.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0497]
gi|386174277|gb|EIH46277.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0741]
gi|386178340|gb|EIH55819.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
3.2608]
gi|386182843|gb|EIH65599.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
93.0624]
gi|386186852|gb|EIH75675.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
4.0522]
gi|386196781|gb|EIH90994.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
JB1-95]
gi|386201553|gb|EII00544.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.154]
gi|386207068|gb|EII11573.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
5.0959]
gi|386211946|gb|EII22397.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
9.0111]
gi|386220425|gb|EII36889.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
4.0967]
gi|386221371|gb|EII43815.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
2.3916]
gi|386228204|gb|EII55560.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
3.3884]
gi|386234362|gb|EII66340.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
2.4168]
gi|386238114|gb|EII75054.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
3.2303]
gi|386245570|gb|EII87300.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
3003]
gi|386248800|gb|EII94972.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW07793]
gi|386251640|gb|EIJ01332.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli B41]
gi|386259146|gb|EIJ14620.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
900105 (10e)]
gi|388334862|gb|EIL01443.1| GTP-binding protein YsxC [Escherichia coli O103:H25 str. CVM9340]
gi|388337026|gb|EIL03542.1| GTP-binding protein YsxC [Escherichia coli O103:H2 str. CVM9450]
gi|388342245|gb|EIL08292.1| GTP-binding protein YsxC [Escherichia coli O111:H11 str. CVM9534]
gi|388359646|gb|EIL23933.1| GTP-binding protein YsxC [Escherichia coli O111:H8 str. CVM9574]
gi|388368260|gb|EIL31902.1| GTP-binding protein YsxC [Escherichia coli O26:H11 str. CVM9942]
gi|388370215|gb|EIL33755.1| GTP-binding protein YsxC [Escherichia coli O111:H11 str. CVM9545]
gi|388373168|gb|EIL36502.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O26:H11 str. CVM10026]
gi|388383195|gb|EIL44982.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli KD2]
gi|388383728|gb|EIL45477.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
541-15]
gi|388392440|gb|EIL53858.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli KD1]
gi|388406871|gb|EIL67253.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
541-1]
gi|388410989|gb|EIL71182.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli 75]
gi|388419204|gb|EIL78952.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
HM605]
gi|388422497|gb|EIL82075.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
CUMT8]
gi|391264994|gb|EIQ23972.1| putative GTP-binding protein EngB [Shigella boydii 965-58]
gi|391277165|gb|EIQ35916.1| putative GTP-binding protein EngB [Shigella sonnei 3226-85]
gi|391280362|gb|EIQ39034.1| putative GTP-binding protein EngB [Shigella sonnei 3233-85]
gi|391298110|gb|EIQ56131.1| putative GTP-binding protein EngB [Shigella dysenteriae 225-75]
gi|394383853|gb|EJE61436.1| GTP-binding protein YsxC [Escherichia coli O111:H8 str. CVM9634]
gi|394384725|gb|EJE62280.1| GTP-binding protein YsxC [Escherichia coli O26:H11 str. CVM10224]
gi|394389342|gb|EJE66488.1| GTP-binding protein YsxC [Escherichia coli O111:H8 str. CVM9602]
gi|394397972|gb|EJE74194.1| GTP-binding protein YsxC [Escherichia coli O111:H11 str. CVM9553]
gi|394400821|gb|EJE76713.1| GTP-binding protein YsxC [Escherichia coli O111:H11 str. CVM9455]
gi|394403735|gb|EJE79274.1| GTP-binding protein YsxC [Escherichia coli O26:H11 str. CVM10021]
gi|394418395|gb|EJE92071.1| GTP-binding protein YsxC [Escherichia coli O26:H11 str. CVM10030]
gi|394421115|gb|EJE94604.1| GTP-binding protein YsxC [Escherichia coli O26:H11 str. CVM9952]
gi|397782930|gb|EJK93793.1| hypothetical protein ECSTECO31_4316 [Escherichia coli STEC_O31]
gi|397894966|gb|EJL11402.1| cell division protein putative checkpoint GTPase [Shigella sonnei
str. Moseley]
gi|404335842|gb|EJZ62310.1| cell division protein putative checkpoint GTPase [Shigella flexneri
1485-80]
gi|406780117|gb|AFS59541.1| GTP-binding protein YsxC [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407056706|gb|AFS76757.1| GTP-binding protein YsxC [Escherichia coli O104:H4 str. 2011C-3493]
gi|407062900|gb|AFS83947.1| GTP-binding protein YsxC [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408197635|gb|EKI22889.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW00353]
gi|408224837|gb|EKI48539.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli N1]
gi|408293000|gb|EKJ11470.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1865]
gi|408457553|gb|EKJ81348.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
AD30]
gi|408563868|gb|EKK39989.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
8.0569]
gi|421935240|gb|EKT92933.1| GTP-binding protein YsxC [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421944848|gb|EKU02088.1| GTP-binding protein YsxC [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421947454|gb|EKU04528.1| GTP-binding protein YsxC [Escherichia coli O111:H11 str.
CFSAN001630]
gi|429354860|gb|EKY91555.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02030]
gi|429355602|gb|EKY92289.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429356433|gb|EKY93109.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02092]
gi|429370602|gb|EKZ07166.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02093]
gi|429371062|gb|EKZ07622.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02281]
gi|429375285|gb|EKZ11822.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02318]
gi|429386723|gb|EKZ23169.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-02913]
gi|429389100|gb|EKZ25522.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-03439]
gi|429390209|gb|EKZ26624.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-03943]
gi|429399769|gb|EKZ36088.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. 11-04080]
gi|429401696|gb|EKZ37993.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429404299|gb|EKZ40576.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429412556|gb|EKZ48749.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429415276|gb|EKZ51442.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429422792|gb|EKZ58903.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429427373|gb|EKZ63457.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429431633|gb|EKZ67679.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429437904|gb|EKZ73899.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429442253|gb|EKZ78211.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429447424|gb|EKZ83343.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429454112|gb|EKZ89977.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec12-0466]
gi|429458403|gb|EKZ94228.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O104:H4 str. Ec11-9941]
gi|430871725|gb|ELB95352.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE2]
gi|430872617|gb|ELB96215.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE4]
gi|430882793|gb|ELC05863.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE5]
gi|430895603|gb|ELC17865.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE12]
gi|430902780|gb|ELC24584.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE15]
gi|430911745|gb|ELC33014.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE16]
gi|430913384|gb|ELC34506.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE21]
gi|430920119|gb|ELC41029.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE25]
gi|430922334|gb|ELC43090.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE26]
gi|430925758|gb|ELC46360.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE28]
gi|430932135|gb|ELC52568.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE39]
gi|430935616|gb|ELC55916.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE44]
gi|430941336|gb|ELC61489.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE178]
gi|430949674|gb|ELC69101.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE187]
gi|430950050|gb|ELC69441.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE181]
gi|430959558|gb|ELC77875.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE188]
gi|430961856|gb|ELC79855.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE189]
gi|430970240|gb|ELC87312.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE191]
gi|430978835|gb|ELC95629.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE201]
gi|430984933|gb|ELD01543.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE204]
gi|430990376|gb|ELD06811.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE205]
gi|430994986|gb|ELD11294.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE206]
gi|431001524|gb|ELD17105.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE208]
gi|431003009|gb|ELD18496.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE210]
gi|431013446|gb|ELD27179.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE212]
gi|431016942|gb|ELD30461.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE213]
gi|431030756|gb|ELD43762.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE214]
gi|431034508|gb|ELD46439.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE220]
gi|431037753|gb|ELD48728.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE224]
gi|431047138|gb|ELD57144.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE230]
gi|431047188|gb|ELD57193.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE228]
gi|431059831|gb|ELD69178.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE233]
gi|431066392|gb|ELD75021.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE235]
gi|431066734|gb|ELD75357.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE234]
gi|431070212|gb|ELD78518.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE236]
gi|431075322|gb|ELD82844.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE237]
gi|431080074|gb|ELD86880.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE47]
gi|431088067|gb|ELD93972.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE49]
gi|431089337|gb|ELD95156.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE51]
gi|431096779|gb|ELE02239.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE53]
gi|431104028|gb|ELE08635.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE55]
gi|431111218|gb|ELE15123.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE56]
gi|431114040|gb|ELE17594.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE57]
gi|431117252|gb|ELE20514.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE58]
gi|431125391|gb|ELE27806.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE60]
gi|431130217|gb|ELE32326.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE62]
gi|431136421|gb|ELE38289.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE66]
gi|431143843|gb|ELE45557.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE67]
gi|431145806|gb|ELE47411.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE72]
gi|431150113|gb|ELE51170.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE75]
gi|431155379|gb|ELE56135.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE76]
gi|431159910|gb|ELE60453.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE77]
gi|431166623|gb|ELE66930.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE80]
gi|431175769|gb|ELE75759.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE81]
gi|431176615|gb|ELE76558.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE83]
gi|431177262|gb|ELE77194.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE86]
gi|431186651|gb|ELE86191.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE87]
gi|431187166|gb|ELE86679.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE93]
gi|431196546|gb|ELE95472.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE111]
gi|431206195|gb|ELF04620.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE116]
gi|431207065|gb|ELF05373.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE119]
gi|431209704|gb|ELF07775.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE142]
gi|431216928|gb|ELF14520.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE143]
gi|431218791|gb|ELF16223.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE156]
gi|431234212|gb|ELF29619.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE161]
gi|431239484|gb|ELF33961.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE169]
gi|431239776|gb|ELF34246.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE171]
gi|431251140|gb|ELF45158.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE8]
gi|431254717|gb|ELF47985.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE6]
gi|431261653|gb|ELF53678.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE17]
gi|431269613|gb|ELF60919.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE9]
gi|431270347|gb|ELF61513.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE45]
gi|431270397|gb|ELF61562.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE18]
gi|431280672|gb|ELF71587.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE23]
gi|431289006|gb|ELF79753.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE43]
gi|431289833|gb|ELF80564.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE42]
gi|431293244|gb|ELF83624.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE29]
gi|431299082|gb|ELF88658.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE22]
gi|431304984|gb|ELF93507.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE46]
gi|431315052|gb|ELG02980.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE48]
gi|431321501|gb|ELG09102.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE50]
gi|431323059|gb|ELG10612.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE54]
gi|431323664|gb|ELG11136.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE59]
gi|431333919|gb|ELG21095.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE63]
gi|431334502|gb|ELG21660.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE65]
gi|431335079|gb|ELG22221.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE78]
gi|431347591|gb|ELG34474.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE79]
gi|431352274|gb|ELG39052.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE91]
gi|431353977|gb|ELG40728.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE84]
gi|431359459|gb|ELG46096.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE101]
gi|431359694|gb|ELG46320.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE115]
gi|431373039|gb|ELG58699.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE118]
gi|431377161|gb|ELG62294.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE123]
gi|431380855|gb|ELG65491.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE136]
gi|431381790|gb|ELG66141.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE135]
gi|431384772|gb|ELG68774.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE140]
gi|431391753|gb|ELG75359.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE141]
gi|431400648|gb|ELG84015.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE146]
gi|431417055|gb|ELG99525.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE154]
gi|431421283|gb|ELH03496.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE192]
gi|431422952|gb|ELH05082.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE158]
gi|431425855|gb|ELH07901.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE194]
gi|431429603|gb|ELH11528.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE165]
gi|431435130|gb|ELH16743.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE190]
gi|431458842|gb|ELH39161.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE184]
gi|431459418|gb|ELH39712.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE183]
gi|431466771|gb|ELH46788.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE196]
gi|431467010|gb|ELH47022.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE202]
gi|431476198|gb|ELH55992.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE203]
gi|431477122|gb|ELH56893.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE197]
gi|431485238|gb|ELH64902.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE209]
gi|431489980|gb|ELH69603.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE207]
gi|431493007|gb|ELH72602.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE215]
gi|431501568|gb|ELH80547.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE217]
gi|431503844|gb|ELH82578.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE223]
gi|431513853|gb|ELH91932.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE218]
gi|431520620|gb|ELH97941.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE229]
gi|431521363|gb|ELH98609.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE227]
gi|431525714|gb|ELI02495.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE104]
gi|431526283|gb|ELI03040.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE105]
gi|431529958|gb|ELI06648.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE106]
gi|431539829|gb|ELI15467.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE109]
gi|431547608|gb|ELI21904.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE113]
gi|431551891|gb|ELI25855.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE117]
gi|431561431|gb|ELI34801.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE120]
gi|431565151|gb|ELI38293.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE122]
gi|431565349|gb|ELI38482.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE124]
gi|431577390|gb|ELI50025.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE125]
gi|431578257|gb|ELI50868.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE128]
gi|431582030|gb|ELI54466.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE129]
gi|431592628|gb|ELI63198.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE131]
gi|431597105|gb|ELI67018.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE133]
gi|431600134|gb|ELI69810.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE137]
gi|431606369|gb|ELI75746.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE138]
gi|431615558|gb|ELI84686.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE145]
gi|431624099|gb|ELI92721.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE150]
gi|431630021|gb|ELI98363.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE153]
gi|431638294|gb|ELJ06332.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE157]
gi|431639520|gb|ELJ07376.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE160]
gi|431641857|gb|ELJ09590.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE163]
gi|431652855|gb|ELJ19975.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE166]
gi|431655071|gb|ELJ22112.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE167]
gi|431656829|gb|ELJ23803.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE168]
gi|431666578|gb|ELJ33206.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE174]
gi|431669353|gb|ELJ35777.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE176]
gi|431672918|gb|ELJ39151.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE177]
gi|431682918|gb|ELJ48563.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE179]
gi|431683318|gb|ELJ48955.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE180]
gi|431686991|gb|ELJ52544.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE232]
gi|431697509|gb|ELJ62618.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE82]
gi|431701093|gb|ELJ66014.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE85]
gi|431701148|gb|ELJ66068.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE88]
gi|431712801|gb|ELJ77078.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE90]
gi|431715345|gb|ELJ79510.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE95]
gi|431716481|gb|ELJ80593.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE94]
gi|431727835|gb|ELJ91570.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE97]
gi|431731157|gb|ELJ94667.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE99]
gi|441603989|emb|CCP98797.1| GTP-binding protein EngB [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|441652784|emb|CCQ04102.1| GTP-binding protein EngB [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|441711642|emb|CCQ07949.1| GTP-binding protein EngB [Escherichia coli Nissle 1917]
gi|443419848|gb|AGC84752.1| GTP-binding protein YsxC [Escherichia coli APEC O78]
gi|449313461|gb|EMD03670.1| GTP-binding protein YsxC [Escherichia coli O08]
gi|449314086|gb|EMD04265.1| GTP-binding protein YsxC [Escherichia coli S17]
Length = 210
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 68 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT-SS 285
+ W + I + ++ TK DK +G ++ + LN +E + F + T SS
Sbjct: 128 QMIEWAVDSNIAVLVLLTKADKL---ASGARKAQ--LNMVREAVLAF--NGDVQVETFSS 180
Query: 286 VTNQGRDEI 294
+ QG D++
Sbjct: 181 LKKQGVDKL 189
>gi|420388224|ref|ZP_14887552.1| putative GTP-binding protein EngB [Escherichia coli EPECa12]
gi|391301187|gb|EIQ59085.1| putative GTP-binding protein EngB [Escherichia coli EPECa12]
Length = 198
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 68 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT-SS 285
+ W + I + ++ TK DK +G ++ + LN +E + F + T SS
Sbjct: 128 QMIEWAVDSNIAVLVLLTKADKL---ASGARKAQ--LNMVREAVLAF--NGDVQVETFSS 180
Query: 286 VTNQGRDEI 294
+ QG D++
Sbjct: 181 LKKQGVDKL 189
>gi|156936144|ref|YP_001440060.1| ribosome biogenesis GTP-binding protein YsxC [Cronobacter sakazakii
ATCC BAA-894]
gi|389839022|ref|YP_006341106.1| ribosome biogenesis GTP-binding protein YsxC [Cronobacter sakazakii
ES15]
gi|429118495|ref|ZP_19179258.1| GTP-binding protein EngB [Cronobacter sakazakii 680]
gi|156534398|gb|ABU79224.1| hypothetical protein ESA_04042 [Cronobacter sakazakii ATCC BAA-894]
gi|387849498|gb|AFJ97595.1| ribosome biogenesis GTP-binding protein YsxC [Cronobacter sakazakii
ES15]
gi|426327041|emb|CCK09995.1| GTP-binding protein EngB [Cronobacter sakazakii 680]
Length = 222
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 92/167 (55%), Gaps = 5/167 (2%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 19 QTHFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 78
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R L + +L+D P K +D
Sbjct: 79 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQ 138
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF 273
+ W + IP+ ++ TK DK +G ++ + LN +E + F
Sbjct: 139 QMIEWAVDSGIPVLVLLTKADKL---ASGARKAQ--LNMVREAVIAF 180
>gi|148543886|ref|YP_001271256.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus reuteri
DSM 20016]
gi|184153286|ref|YP_001841627.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus reuteri
JCM 1112]
gi|227364794|ref|ZP_03848842.1| GTPase [Lactobacillus reuteri MM2-3]
gi|227544994|ref|ZP_03975043.1| GTPase [Lactobacillus reuteri CF48-3A]
gi|325682581|ref|ZP_08162098.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus reuteri
MM4-1A]
gi|338204254|ref|YP_004650399.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus reuteri
SD2112]
gi|423332832|ref|ZP_17310614.1| GTP-binding protein [Lactobacillus reuteri ATCC 53608]
gi|166920113|sp|A5VJ95.1|ENGB_LACRD RecName: Full=Probable GTP-binding protein EngB
gi|229807536|sp|B2G6R5.1|ENGB_LACRJ RecName: Full=Probable GTP-binding protein EngB
gi|148530920|gb|ABQ82919.1| small GTP-binding protein [Lactobacillus reuteri DSM 20016]
gi|183224630|dbj|BAG25147.1| GTP-binding protein [Lactobacillus reuteri JCM 1112]
gi|227070138|gb|EEI08513.1| GTPase [Lactobacillus reuteri MM2-3]
gi|227185011|gb|EEI65082.1| GTPase [Lactobacillus reuteri CF48-3A]
gi|324978420|gb|EGC15370.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus reuteri
MM4-1A]
gi|336449494|gb|AEI58109.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus reuteri
SD2112]
gi|337727950|emb|CCC03039.1| GTP-binding protein [Lactobacillus reuteri ATCC 53608]
Length = 196
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 100/193 (51%), Gaps = 11/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V + S+V E P +PE ALVGRSNVGKSSL N L+ R+ A TS PGKTQ
Sbjct: 2 EVHNVDLTISAVSDEQYPKTNIPEIALVGRSNVGKSSLTNVLINRRNFAHTSSQPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + + D Y VD+PGYGYA ++ R + K + Y R L V L+DA P
Sbjct: 62 LNFYDVEDKVYFVDVPGYGYAKVSKKERERFGKMIEQYLTQREQLRGVIQLVDARHEPTP 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFF--QTAPPWI 281
D+ +WL IP +V TK DK K+ N LI+ +++ P I
Sbjct: 122 DDVNMYNWLQYYNIPTLIVGTKIDKVKRSA---------WNRQLSLIKKTLDVESSTPII 172
Query: 282 MTSSVTNQGRDEI 294
+ S+ +G+D++
Sbjct: 173 LFSATEKKGKDDV 185
>gi|57239177|ref|YP_180313.1| ribosome biogenesis GTP-binding protein YsxC [Ehrlichia ruminantium
str. Welgevonden]
gi|58579135|ref|YP_197347.1| ribosome biogenesis GTP-binding protein YsxC [Ehrlichia ruminantium
str. Welgevonden]
gi|81557312|sp|Q5HB81.1|ENGB_EHRRW RecName: Full=Probable GTP-binding protein EngB
gi|57161256|emb|CAH58177.1| putative GTP binding protein EngB [Ehrlichia ruminantium str.
Welgevonden]
gi|58417761|emb|CAI26965.1| Probable GTP-binding protein engB [Ehrlichia ruminantium str.
Welgevonden]
Length = 200
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 104/197 (52%), Gaps = 8/197 (4%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
++Q +F+ + + P +PE AL GRSNVGKSSL+N++ +K A S PG T+ I
Sbjct: 7 MSQCQFIIGATSIKSLPDFSIPEVALAGRSNVGKSSLINAITNNRKNARISSKPGCTRQI 66
Query: 165 NHFRINDS-WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
N + IN LVDLPGYGY+ A R + + Y LNR L V LLIDA + K
Sbjct: 67 NFYLINKGLMVLVDLPGYGYSKADRATVNSYICLMEYYLLNRKNLSKVVLLIDAKVGFKE 126
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDL++ WL +QI LV TK D+ + + ++D Q F P I
Sbjct: 127 IDLDFIRWLEVHQILYQLVLTKIDRVQ-----SNVLDVIVSDIQNFNLNFI--IYPIINV 179
Query: 284 SSVTNQGRDEILLHMAQ 300
SS QG +E++ +AQ
Sbjct: 180 SSKCKQGIEELIYEIAQ 196
>gi|15834041|ref|NP_312814.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. Sakai]
gi|161367480|ref|NP_290489.2| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. EDL933]
gi|168755530|ref|ZP_02780537.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str.
EC4401]
gi|168768147|ref|ZP_02793154.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str.
EC4486]
gi|168780765|ref|ZP_02805772.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str.
EC4076]
gi|168786702|ref|ZP_02811709.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str.
EC869]
gi|168799576|ref|ZP_02824583.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str.
EC508]
gi|195937501|ref|ZP_03082883.1| GTPase EngB [Escherichia coli O157:H7 str. EC4024]
gi|208807401|ref|ZP_03249738.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. EC4206]
gi|208814207|ref|ZP_03255536.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. EC4045]
gi|208819675|ref|ZP_03259995.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. EC4042]
gi|209398819|ref|YP_002273380.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. EC4115]
gi|217326295|ref|ZP_03442379.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. TW14588]
gi|254795855|ref|YP_003080692.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. TW14359]
gi|261223491|ref|ZP_05937772.1| GTP-binding protein [Escherichia coli O157:H7 str. FRIK2000]
gi|261257254|ref|ZP_05949787.1| GTP-binding protein [Escherichia coli O157:H7 str. FRIK966]
gi|291285275|ref|YP_003502093.1| GTP-binding protein engB [Escherichia coli O55:H7 str. CB9615]
gi|387509308|ref|YP_006161564.1| GTP-binding protein YsxC [Escherichia coli O55:H7 str. RM12579]
gi|387885086|ref|YP_006315388.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
Xuzhou21]
gi|416315400|ref|ZP_11659338.1| GTP-binding protein EngB [Escherichia coli O157:H7 str. 1044]
gi|416319689|ref|ZP_11662241.1| GTP-binding protein EngB [Escherichia coli O157:H7 str. EC1212]
gi|416327971|ref|ZP_11667840.1| GTP-binding protein EngB [Escherichia coli O157:H7 str. 1125]
gi|416778888|ref|ZP_11876138.1| GTP-binding protein YsxC [Escherichia coli O157:H7 str. G5101]
gi|416790194|ref|ZP_11881031.1| GTP-binding protein YsxC [Escherichia coli O157:H- str. 493-89]
gi|416801967|ref|ZP_11885919.1| GTP-binding protein YsxC [Escherichia coli O157:H- str. H 2687]
gi|416812818|ref|ZP_11890841.1| GTP-binding protein YsxC [Escherichia coli O55:H7 str. 3256-97]
gi|416833615|ref|ZP_11900453.1| GTP-binding protein YsxC [Escherichia coli O157:H7 str. LSU-61]
gi|417142399|ref|ZP_11984974.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
97.0259]
gi|417311424|ref|ZP_12098160.1| GTP-binding protein [Escherichia coli PCN033]
gi|419047942|ref|ZP_13594870.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC3A]
gi|419059776|ref|ZP_13606573.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC3C]
gi|419065165|ref|ZP_13611871.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC3D]
gi|419072207|ref|ZP_13617803.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC3E]
gi|419078148|ref|ZP_13623643.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC3F]
gi|419083185|ref|ZP_13628625.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC4A]
gi|419089169|ref|ZP_13634516.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC4B]
gi|419100850|ref|ZP_13646034.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC4D]
gi|419106498|ref|ZP_13651618.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC4E]
gi|419111892|ref|ZP_13656940.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC4F]
gi|419123154|ref|ZP_13668092.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC5B]
gi|419128662|ref|ZP_13673529.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC5C]
gi|419134159|ref|ZP_13678978.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC5D]
gi|419139225|ref|ZP_13684013.1| putative GTP-binding protein EngB [Escherichia coli DEC5E]
gi|420277993|ref|ZP_14780270.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA40]
gi|420280184|ref|ZP_14782437.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW06591]
gi|420295050|ref|ZP_14797156.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW11039]
gi|420306928|ref|ZP_14808912.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW10119]
gi|420312223|ref|ZP_14814147.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1738]
gi|420317933|ref|ZP_14819800.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1734]
gi|421814932|ref|ZP_16250629.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
8.0416]
gi|421820665|ref|ZP_16256146.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
10.0821]
gi|421826642|ref|ZP_16261993.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FRIK920]
gi|421827513|ref|ZP_16262852.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli PA7]
gi|422835410|ref|ZP_16883465.1| GTP-binding protein engB [Escherichia coli E101]
gi|422976188|ref|ZP_16977024.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TA124]
gi|423728107|ref|ZP_17701870.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA31]
gi|424086590|ref|ZP_17823058.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FDA517]
gi|424093003|ref|ZP_17828909.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FRIK1996]
gi|424112527|ref|ZP_17846736.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
93-001]
gi|424137136|ref|ZP_17869554.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA10]
gi|424150063|ref|ZP_17881421.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA15]
gi|424163791|ref|ZP_17886841.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA24]
gi|424257731|ref|ZP_17892381.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA25]
gi|424336129|ref|ZP_17898317.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA28]
gi|424452397|ref|ZP_17904021.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA32]
gi|424465092|ref|ZP_17915392.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA39]
gi|424471325|ref|ZP_17921105.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA41]
gi|424477813|ref|ZP_17927111.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA42]
gi|424483597|ref|ZP_17932560.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW07945]
gi|424489792|ref|ZP_17938311.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW09098]
gi|424496488|ref|ZP_17944000.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW09195]
gi|424503113|ref|ZP_17949979.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4203]
gi|424509385|ref|ZP_17955734.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4196]
gi|424516789|ref|ZP_17961355.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW14313]
gi|424522918|ref|ZP_17967005.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW14301]
gi|424528789|ref|ZP_17972483.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4421]
gi|424547168|ref|ZP_17989480.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4402]
gi|424553364|ref|ZP_17995173.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4439]
gi|424565886|ref|ZP_18006871.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4437]
gi|425106743|ref|ZP_18509041.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
5.2239]
gi|425128674|ref|ZP_18529827.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
8.0586]
gi|425134441|ref|ZP_18535276.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
8.2524]
gi|425141035|ref|ZP_18541399.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
10.0833]
gi|425146709|ref|ZP_18546685.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
10.0869]
gi|425152825|ref|ZP_18552422.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
88.0221]
gi|425165043|ref|ZP_18563913.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FDA506]
gi|425170791|ref|ZP_18569248.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FDA507]
gi|425182894|ref|ZP_18580574.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FRIK1999]
gi|425195922|ref|ZP_18592676.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
NE1487]
gi|425202400|ref|ZP_18598592.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
NE037]
gi|425214535|ref|ZP_18609921.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli PA4]
gi|425220663|ref|ZP_18615609.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA23]
gi|425227308|ref|ZP_18621758.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA49]
gi|425233465|ref|ZP_18627488.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA45]
gi|425239387|ref|ZP_18633091.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TT12B]
gi|425245623|ref|ZP_18638913.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MA6]
gi|425251817|ref|ZP_18644744.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
5905]
gi|425257617|ref|ZP_18650095.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
CB7326]
gi|425263871|ref|ZP_18655846.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC96038]
gi|425269863|ref|ZP_18661473.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
5412]
gi|425297335|ref|ZP_18687442.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA38]
gi|425332466|ref|ZP_18720262.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1846]
gi|425338643|ref|ZP_18725965.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1847]
gi|425357048|ref|ZP_18743093.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1850]
gi|425362998|ref|ZP_18748629.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1856]
gi|425369264|ref|ZP_18754324.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1862]
gi|425388455|ref|ZP_18771997.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1866]
gi|425395183|ref|ZP_18778272.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1868]
gi|425401238|ref|ZP_18783927.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1869]
gi|425407333|ref|ZP_18789537.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1870]
gi|425413691|ref|ZP_18795436.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
NE098]
gi|425420089|ref|ZP_18801338.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FRIK523]
gi|425431303|ref|ZP_18811895.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
0.1304]
gi|428955783|ref|ZP_19027556.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
88.1042]
gi|428961913|ref|ZP_19033169.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
89.0511]
gi|428968404|ref|ZP_19039091.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
90.0091]
gi|428974209|ref|ZP_19044503.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
90.0039]
gi|428980640|ref|ZP_19050429.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
90.2281]
gi|428986360|ref|ZP_19055732.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
93.0055]
gi|428992498|ref|ZP_19061469.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
93.0056]
gi|428998395|ref|ZP_19066969.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
94.0618]
gi|429004784|ref|ZP_19072826.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
95.0183]
gi|429010822|ref|ZP_19078201.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
95.1288]
gi|429023187|ref|ZP_19089685.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0428]
gi|429035350|ref|ZP_19100856.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0939]
gi|429041458|ref|ZP_19106529.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0932]
gi|429047281|ref|ZP_19111976.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0107]
gi|429052637|ref|ZP_19117192.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
97.0003]
gi|429058197|ref|ZP_19122437.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
97.1742]
gi|429063712|ref|ZP_19127667.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
97.0007]
gi|429075692|ref|ZP_19138933.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0678]
gi|429829121|ref|ZP_19360098.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0109]
gi|429835586|ref|ZP_19365810.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
97.0010]
gi|432452125|ref|ZP_19694379.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE193]
gi|433035788|ref|ZP_20223473.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE112]
gi|444927606|ref|ZP_21246858.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
09BKT078844]
gi|444933215|ref|ZP_21252210.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0814]
gi|444938762|ref|ZP_21257481.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0815]
gi|444944333|ref|ZP_21262805.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0816]
gi|444960788|ref|ZP_21278598.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.1753]
gi|444966027|ref|ZP_21283577.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.1775]
gi|444972050|ref|ZP_21289377.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.1793]
gi|444977338|ref|ZP_21294402.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.1805]
gi|444982720|ref|ZP_21299614.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli ATCC
700728]
gi|444988090|ref|ZP_21304855.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA11]
gi|444993468|ref|ZP_21310097.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA19]
gi|444998646|ref|ZP_21315134.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA13]
gi|445004191|ref|ZP_21320569.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli PA2]
gi|445009611|ref|ZP_21325828.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA47]
gi|445014689|ref|ZP_21330782.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA48]
gi|445020610|ref|ZP_21336563.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli PA8]
gi|445026020|ref|ZP_21341831.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
7.1982]
gi|445031427|ref|ZP_21347081.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.1781]
gi|445036898|ref|ZP_21352412.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.1762]
gi|445053315|ref|ZP_21368318.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
95.0083]
gi|445056351|ref|ZP_21371251.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0670]
gi|450195820|ref|ZP_21892663.1| GTP-binding protein YsxC [Escherichia coli SEPT362]
gi|452969521|ref|ZP_21967748.1| GTP-binding protein YsxC [Escherichia coli O157:H7 str. EC4009]
gi|21362528|sp|Q8X8H0.1|ENGB_ECO57 RecName: Full=Probable GTP-binding protein EngB
gi|238058983|sp|B5YZ00.1|ENGB_ECO5E RecName: Full=Probable GTP-binding protein EngB
gi|13364263|dbj|BAB38210.1| essential GTPase for cell cycle [Escherichia coli O157:H7 str.
Sakai]
gi|189001573|gb|EDU70559.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str.
EC4076]
gi|189357180|gb|EDU75599.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str.
EC4401]
gi|189362605|gb|EDU81024.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str.
EC4486]
gi|189373339|gb|EDU91755.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str.
EC869]
gi|189378061|gb|EDU96477.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str.
EC508]
gi|208727202|gb|EDZ76803.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. EC4206]
gi|208735484|gb|EDZ84171.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. EC4045]
gi|208739798|gb|EDZ87480.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. EC4042]
gi|209160219|gb|ACI37652.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. EC4115]
gi|209752828|gb|ACI74721.1| hypothetical protein ECs4787 [Escherichia coli]
gi|209752830|gb|ACI74722.1| hypothetical protein ECs4787 [Escherichia coli]
gi|209752832|gb|ACI74723.1| hypothetical protein ECs4787 [Escherichia coli]
gi|209752834|gb|ACI74724.1| hypothetical protein ECs4787 [Escherichia coli]
gi|209752836|gb|ACI74725.1| hypothetical protein ECs4787 [Escherichia coli]
gi|217322516|gb|EEC30940.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
O157:H7 str. TW14588]
gi|254595255|gb|ACT74616.1| GTP-binding protein [Escherichia coli O157:H7 str. TW14359]
gi|290765148|gb|ADD59109.1| Probable GTP-binding protein engB [Escherichia coli O55:H7 str.
CB9615]
gi|320191045|gb|EFW65695.1| GTP-binding protein EngB [Escherichia coli O157:H7 str. EC1212]
gi|320639202|gb|EFX08829.1| GTP-binding protein YsxC [Escherichia coli O157:H7 str. G5101]
gi|320644590|gb|EFX13644.1| GTP-binding protein YsxC [Escherichia coli O157:H- str. 493-89]
gi|320649914|gb|EFX18422.1| GTP-binding protein YsxC [Escherichia coli O157:H- str. H 2687]
gi|320655221|gb|EFX23167.1| GTP-binding protein YsxC [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320666007|gb|EFX33026.1| GTP-binding protein YsxC [Escherichia coli O157:H7 str. LSU-61]
gi|326338133|gb|EGD61963.1| GTP-binding protein EngB [Escherichia coli O157:H7 str. 1044]
gi|326342573|gb|EGD66346.1| GTP-binding protein EngB [Escherichia coli O157:H7 str. 1125]
gi|338767001|gb|EGP21885.1| GTP-binding protein [Escherichia coli PCN033]
gi|371594309|gb|EHN83178.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TA124]
gi|371612390|gb|EHO00901.1| GTP-binding protein engB [Escherichia coli E101]
gi|374361302|gb|AEZ43009.1| GTP-binding protein YsxC [Escherichia coli O55:H7 str. RM12579]
gi|377888846|gb|EHU53316.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC3A]
gi|377901736|gb|EHU66050.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC3C]
gi|377905300|gb|EHU69571.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC3D]
gi|377906187|gb|EHU70436.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC3E]
gi|377916901|gb|EHU80975.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC3F]
gi|377922817|gb|EHU86792.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC4A]
gi|377926431|gb|EHU90365.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC4B]
gi|377937123|gb|EHV00910.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC4D]
gi|377943528|gb|EHV07238.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC4E]
gi|377953584|gb|EHV17153.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC4F]
gi|377961431|gb|EHV24899.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC5B]
gi|377969153|gb|EHV32533.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC5C]
gi|377969842|gb|EHV33216.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC5D]
gi|377980083|gb|EHV43351.1| putative GTP-binding protein EngB [Escherichia coli DEC5E]
gi|386155423|gb|EIH11778.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
97.0259]
gi|386798544|gb|AFJ31578.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
Xuzhou21]
gi|390637070|gb|EIN16629.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FRIK1996]
gi|390638119|gb|EIN17636.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FDA517]
gi|390656502|gb|EIN34368.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
93-001]
gi|390691719|gb|EIN66445.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA10]
gi|390697305|gb|EIN71729.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA15]
gi|390717265|gb|EIN90052.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA24]
gi|390718023|gb|EIN90788.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA25]
gi|390724196|gb|EIN96765.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA28]
gi|390736738|gb|EIO08061.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA31]
gi|390737376|gb|EIO08675.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA32]
gi|390755587|gb|EIO25123.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA40]
gi|390758335|gb|EIO27797.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA39]
gi|390761667|gb|EIO30944.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA41]
gi|390764751|gb|EIO33950.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA42]
gi|390783327|gb|EIO50934.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW06591]
gi|390785986|gb|EIO53526.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW07945]
gi|390792929|gb|EIO60276.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW11039]
gi|390799930|gb|EIO67053.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW09098]
gi|390813425|gb|EIO80041.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW10119]
gi|390821884|gb|EIO88048.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW09195]
gi|390822352|gb|EIO88479.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4203]
gi|390827445|gb|EIO93212.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4196]
gi|390840628|gb|EIP04647.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW14313]
gi|390842568|gb|EIP06409.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TW14301]
gi|390847699|gb|EIP11229.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4421]
gi|390866454|gb|EIP28414.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4402]
gi|390874783|gb|EIP35875.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4439]
gi|390889961|gb|EIP49651.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC4437]
gi|390897732|gb|EIP57039.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1738]
gi|390905663|gb|EIP64593.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1734]
gi|408063513|gb|EKG98004.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FRIK920]
gi|408074408|gb|EKH08690.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli PA7]
gi|408075079|gb|EKH09322.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FDA506]
gi|408080071|gb|EKH14161.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FDA507]
gi|408094418|gb|EKH27440.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FRIK1999]
gi|408105567|gb|EKH37718.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
NE1487]
gi|408112411|gb|EKH44066.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
NE037]
gi|408124877|gb|EKH55520.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli PA4]
gi|408134637|gb|EKH64457.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA23]
gi|408136722|gb|EKH66457.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA49]
gi|408143600|gb|EKH72879.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA45]
gi|408151981|gb|EKH80435.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
TT12B]
gi|408157042|gb|EKH85215.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MA6]
gi|408161159|gb|EKH89133.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
5905]
gi|408170214|gb|EKH97432.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
CB7326]
gi|408177147|gb|EKI03966.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC96038]
gi|408180095|gb|EKI06726.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
5412]
gi|408210479|gb|EKI35042.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA38]
gi|408242755|gb|EKI65309.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1846]
gi|408251697|gb|EKI73417.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1847]
gi|408270893|gb|EKI91047.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1850]
gi|408274068|gb|EKI94096.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1856]
gi|408281979|gb|EKJ01332.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1862]
gi|408303046|gb|EKJ20514.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1868]
gi|408304366|gb|EKJ21794.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1866]
gi|408315688|gb|EKJ31992.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1869]
gi|408321158|gb|EKJ37200.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
EC1870]
gi|408322923|gb|EKJ38896.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
NE098]
gi|408333639|gb|EKJ48585.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
FRIK523]
gi|408341648|gb|EKJ56091.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
0.1304]
gi|408544677|gb|EKK22126.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
5.2239]
gi|408563283|gb|EKK39420.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
8.0586]
gi|408575540|gb|EKK51198.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
10.0833]
gi|408578279|gb|EKK53798.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
8.2524]
gi|408588190|gb|EKK62778.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
10.0869]
gi|408593139|gb|EKK67467.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
88.0221]
gi|408598789|gb|EKK72730.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
8.0416]
gi|408608533|gb|EKK81923.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
10.0821]
gi|427200912|gb|EKV71319.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
89.0511]
gi|427201164|gb|EKV71560.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
88.1042]
gi|427217428|gb|EKV86490.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
90.0091]
gi|427221194|gb|EKV90062.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
90.2281]
gi|427224073|gb|EKV92795.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
90.0039]
gi|427237704|gb|EKW05229.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
93.0056]
gi|427237787|gb|EKW05310.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
93.0055]
gi|427242369|gb|EKW09780.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
94.0618]
gi|427255637|gb|EKW21886.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
95.0183]
gi|427257719|gb|EKW23836.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
95.1288]
gi|427272982|gb|EKW37688.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0428]
gi|427280221|gb|EKW44586.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0939]
gi|427288786|gb|EKW52387.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0932]
gi|427295665|gb|EKW58751.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0107]
gi|427297469|gb|EKW60503.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
97.0003]
gi|427307710|gb|EKW70145.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
97.1742]
gi|427310641|gb|EKW72880.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
97.0007]
gi|427324780|gb|EKW86240.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0678]
gi|429250588|gb|EKY35240.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0109]
gi|429251053|gb|EKY35681.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
97.0010]
gi|430977275|gb|ELC94126.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE193]
gi|431545538|gb|ELI20189.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE112]
gi|444534788|gb|ELV14972.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0814]
gi|444536241|gb|ELV16271.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
09BKT078844]
gi|444545042|gb|ELV23999.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0815]
gi|444554138|gb|ELV31718.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0816]
gi|444568752|gb|ELV45405.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.1753]
gi|444572221|gb|ELV48666.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.1775]
gi|444575640|gb|ELV51870.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.1793]
gi|444587766|gb|ELV63175.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.1805]
gi|444588932|gb|ELV64289.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli ATCC
700728]
gi|444589143|gb|ELV64486.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA11]
gi|444602938|gb|ELV77655.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA13]
gi|444603036|gb|ELV77752.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA19]
gi|444612200|gb|ELV86500.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli PA2]
gi|444618733|gb|ELV92804.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA47]
gi|444620086|gb|ELV94102.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA48]
gi|444626413|gb|ELW00207.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli PA8]
gi|444634958|gb|ELW08400.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
7.1982]
gi|444636945|gb|ELW10328.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.1781]
gi|444641771|gb|ELW14989.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.1762]
gi|444659309|gb|ELW31729.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
95.0083]
gi|444671739|gb|ELW43523.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0670]
gi|449315925|gb|EMD06051.1| GTP-binding protein YsxC [Escherichia coli SEPT362]
Length = 210
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 68 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT-SS 285
+ W + I + ++ TK DK +G ++ + LN +E + F + T SS
Sbjct: 128 QMIEWAVDSNIAVLVLLTKADKL---ASGARKAQ--LNMVREAVLAF--NGDVQVETFSS 180
Query: 286 VTNQGRDEI 294
+ QG D++
Sbjct: 181 LKKQGVDKL 189
>gi|308811190|ref|XP_003082903.1| putative endonuclease (ISS) [Ostreococcus tauri]
gi|116054781|emb|CAL56858.1| putative endonuclease (ISS), partial [Ostreococcus tauri]
Length = 820
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 90/135 (66%), Gaps = 3/135 (2%)
Query: 176 VDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQN 235
VDLPGYG+A AP LR W +FT++Y L R TL++V LLID+++ + +DLE WLG
Sbjct: 2 VDLPGYGFANAPEALREKWAEFTREYLLKRETLITVMLLIDSTVKPQRLDLECLDWLGAA 61
Query: 236 QIPMTLVFTKCDKRKKKKNGGK-RPEENLNDF-QELIQGF-FQTAPPWIMTSSVTNQGRD 292
IP+T+VFTK DKRKK G + P+E + +F +E + + + PP I TSS T +G+
Sbjct: 62 GIPVTIVFTKVDKRKKIAAGKRANPQETMEEFCREAMDNWDWDELPPMIYTSSETAEGKR 121
Query: 293 EILLHMAQLRNYWLK 307
E+L H+A LR ++ K
Sbjct: 122 EVLNHIASLRQFFKK 136
>gi|71274790|ref|ZP_00651078.1| GTP-binding protein, HSR1-related [Xylella fastidiosa Dixon]
gi|170729963|ref|YP_001775396.1| ribosome biogenesis GTP-binding protein YsxC [Xylella fastidiosa
M12]
gi|71164522|gb|EAO14236.1| GTP-binding protein, HSR1-related [Xylella fastidiosa Dixon]
gi|71729152|gb|EAO31274.1| GTP-binding protein, HSR1-related [Xylella fastidiosa Ann-1]
gi|167964756|gb|ACA11766.1| GTP-binding protein [Xylella fastidiosa M12]
Length = 219
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 82/141 (58%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A+++ S+ PSD E A GRSN GKSS+LN+L R+ LA SKTPG+TQ + +F
Sbjct: 24 AKYLLSAHTIHQLPSDDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYF 83
Query: 168 RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
+ YLVDLPGYGYA P+EL+ W F YF R L + +++D P K DL+
Sbjct: 84 TVTPQRYLVDLPGYGYAKVPKELQIHWQTFIDSYFHQRQALRGLVVVMDIRHPLKEYDLQ 143
Query: 228 YASWLGQNQIPMTLVFTKCDK 248
++ Q +P + TK DK
Sbjct: 144 MLAYARQRGLPAQALLTKADK 164
>gi|15600685|ref|NP_254179.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas
aeruginosa PAO1]
gi|107104594|ref|ZP_01368512.1| hypothetical protein PaerPA_01005673 [Pseudomonas aeruginosa PACS2]
gi|254243044|ref|ZP_04936366.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|313111567|ref|ZP_07797366.1| putative GTP-binding protein [Pseudomonas aeruginosa 39016]
gi|386069156|ref|YP_005984460.1| GTPase [Pseudomonas aeruginosa NCGM2.S1]
gi|416859109|ref|ZP_11913677.1| GTP-binding protein YsxC [Pseudomonas aeruginosa 138244]
gi|418586777|ref|ZP_13150815.1| GTP-binding protein YsxC [Pseudomonas aeruginosa MPAO1/P1]
gi|418591532|ref|ZP_13155428.1| GTP-binding protein YsxC [Pseudomonas aeruginosa MPAO1/P2]
gi|420142662|ref|ZP_14650252.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas
aeruginosa CIG1]
gi|421153151|ref|ZP_15612712.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas
aeruginosa ATCC 14886]
gi|421164023|ref|ZP_15622691.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas
aeruginosa ATCC 25324]
gi|421183620|ref|ZP_15641069.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas
aeruginosa E2]
gi|421520065|ref|ZP_15966736.1| GTP-binding protein YsxC [Pseudomonas aeruginosa PAO579]
gi|451983735|ref|ZP_21932011.1| GTP-binding protein EngB [Pseudomonas aeruginosa 18A]
gi|13124210|sp|Q9HT81.1|ENGB_PSEAE RecName: Full=Probable GTP-binding protein EngB
gi|9951827|gb|AAG08877.1|AE004962_1 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|126196422|gb|EAZ60485.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|310883868|gb|EFQ42462.1| putative GTP-binding protein [Pseudomonas aeruginosa 39016]
gi|334838766|gb|EGM17473.1| GTP-binding protein YsxC [Pseudomonas aeruginosa 138244]
gi|348037715|dbj|BAK93075.1| GTPase [Pseudomonas aeruginosa NCGM2.S1]
gi|375042733|gb|EHS35377.1| GTP-binding protein YsxC [Pseudomonas aeruginosa MPAO1/P1]
gi|375049591|gb|EHS42082.1| GTP-binding protein YsxC [Pseudomonas aeruginosa MPAO1/P2]
gi|403244572|gb|EJY58438.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas
aeruginosa CIG1]
gi|404345984|gb|EJZ72336.1| GTP-binding protein YsxC [Pseudomonas aeruginosa PAO579]
gi|404524137|gb|EKA34490.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas
aeruginosa ATCC 14886]
gi|404526687|gb|EKA36888.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas
aeruginosa ATCC 25324]
gi|404539714|gb|EKA49161.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas
aeruginosa E2]
gi|451758681|emb|CCQ84534.1| GTP-binding protein EngB [Pseudomonas aeruginosa 18A]
gi|453044800|gb|EME92522.1| GTP-binding protein YsxC [Pseudomonas aeruginosa PA21_ST175]
Length = 215
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 105/194 (54%), Gaps = 6/194 (3%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+A F+ S+ + + CP D E A GRSN GKSS LN+L LA TSKTPG+TQ +N
Sbjct: 13 KASFLISAAQVDQCPPDEGLEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNF 71
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F ++DS LVDLPGYGYA P L+ W + + Y +R++L VFL++D P D
Sbjct: 72 FALDDSRRLVDLPGYGYAKVPIPLKQHWQRHLEAYLSSRASLAGVFLMMDIRHPLTDFDR 131
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSV 286
W +Q+P+ ++ TK DK G L +E+ QG+ A + S+
Sbjct: 132 LMLDWAQASQLPIHVLMTKADKLAF----GAAKNALLKVRREVQQGWGDVATLQLF-SAP 186
Query: 287 TNQGRDEILLHMAQ 300
QG DE + +AQ
Sbjct: 187 KRQGVDEAQMVLAQ 200
>gi|420322607|ref|ZP_14824427.1| putative GTP-binding protein EngB [Shigella flexneri 2850-71]
gi|391245344|gb|EIQ04617.1| putative GTP-binding protein EngB [Shigella flexneri 2850-71]
Length = 210
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 68 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT-SS 285
+ W + I + ++ TK DK +G ++ + LN +E + F + T SS
Sbjct: 128 QMIEWAVDSNIAVLVLLTKADKL---ASGARKAQ--LNMVREAVLAF--NGDVQVETFSS 180
Query: 286 VTNQGRDEI 294
+ QG D++
Sbjct: 181 LKKQGVDKL 189
>gi|322515140|ref|ZP_08068143.1| ribosome biogenesis GTP-binding protein YsxC [Actinobacillus ureae
ATCC 25976]
gi|322118854|gb|EFX91044.1| ribosome biogenesis GTP-binding protein YsxC [Actinobacillus ureae
ATCC 25976]
Length = 206
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 81/142 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+ F+ S+ P D E A GRSN GKS+ LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 KTHFLTSAPDIRHLPEDNGVEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + + LVDLPGYGYAA P +++ W K +Y R L V +L+D P K +D
Sbjct: 68 FEVEPNCKLVDLPGYGYAAVPEQMKLQWQKALGEYLQKRECLRGVVILMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
+ W Q+P+ L+ TK DK
Sbjct: 128 QMIEWAVSTQLPVLLLLTKADK 149
>gi|388457938|ref|ZP_10140233.1| GTP-binding protein YsxC [Fluoribacter dumoffii Tex-KL]
Length = 209
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 84/148 (56%)
Query: 101 RDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGK 160
R+ ++A F+KS+ R P D E A GRSN GKSS LN L K LA TSKTPG+
Sbjct: 2 RENPYSKAVFLKSAARVSQLPDDSGYEVAFAGRSNAGKSSALNCLTGIKNLARTSKTPGR 61
Query: 161 TQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIP 220
TQ IN F I LVDLPGYGYA +++ DW K Y R +L + LL+D P
Sbjct: 62 TQLINLFEIAQERRLVDLPGYGYAKVALQVKMDWQKNLAHYLEVRQSLKGLILLMDIRHP 121
Query: 221 AKPIDLEYASWLGQNQIPMTLVFTKCDK 248
K +DL W + ++P+ ++ TK DK
Sbjct: 122 LKDLDLMMVDWALERELPVHILLTKADK 149
>gi|365925260|ref|ZP_09448023.1| GTP-binding protein [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 195
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 80/136 (58%)
Query: 113 SSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDS 172
S+VR E P +G PE ALVGRSNVGKSSL+N L+ RK A TS PGKTQ +N + +
Sbjct: 11 SAVRPEQYPDEGYPEVALVGRSNVGKSSLINRLINRKSYARTSSQPGKTQTLNFYDVESM 70
Query: 173 WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWL 232
YLVD+PGYGYA + R W + + Y + R L V LID +D++ +L
Sbjct: 71 LYLVDVPGYGYAKVSKAEREKWGRMIETYLVQREPLRGVVSLIDGRHEPTELDVQMVEFL 130
Query: 233 GQNQIPMTLVFTKCDK 248
+P+ LV TK DK
Sbjct: 131 QYYNLPVLLVATKIDK 146
>gi|331703271|ref|YP_004399958.1| putative GTP binding protein EngB [Mycoplasma mycoides subsp. capri
LC str. 95010]
gi|328801826|emb|CBW53979.1| Probable GTP binding protein EngB [Mycoplasma mycoides subsp. capri
LC str. 95010]
Length = 196
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 93/167 (55%), Gaps = 3/167 (1%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ QA F+ S+ + D + E L+GRSNVGKSS +NSL KLA S TPGKT+ +
Sbjct: 2 IKQASFITSAANKSNWIDDDVSEICLIGRSNVGKSSFINSLTNNNKLAKISNTPGKTRLL 61
Query: 165 NHFRINDSWY-LVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
N F IN Y LVD PGYGYA L+ + K ++YF+NR L VFLL+D
Sbjct: 62 NFFEINKGEYRLVDAPGYGYAKVDDNLKIQFAKMMEEYFINRKNLKGVFLLLDLRHKPSN 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK--NGGKRPEENLNDFQE 268
D+ +L IP+ ++ TK DK KK + K +E +N +QE
Sbjct: 122 DDIMMYQFLKHYNIPVVIIGTKLDKLKKSEYIKNEKMIKETINFYQE 168
>gi|170769691|ref|ZP_02904144.1| putative GTP-binding protein EngB [Escherichia albertii TW07627]
gi|170121499|gb|EDS90430.1| putative GTP-binding protein EngB [Escherichia albertii TW07627]
Length = 210
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QMHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 68 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT-SS 285
+ W + I + ++ TK DK +G ++ + LN +E + F + T SS
Sbjct: 128 QMIEWAVDSNIAVLVLLTKADKL---ASGARKAQ--LNMVREAVLAF--NGDVQVETFSS 180
Query: 286 VTNQGRDEI 294
+ QG D++
Sbjct: 181 LKKQGVDKL 189
>gi|419053740|ref|ZP_13600604.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC3B]
gi|419095073|ref|ZP_13640346.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC4C]
gi|419117427|ref|ZP_13662432.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC5A]
gi|428949710|ref|ZP_19021965.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
88.1467]
gi|429017285|ref|ZP_19084144.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
95.0943]
gi|429029208|ref|ZP_19095162.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0427]
gi|429069916|ref|ZP_19133336.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0672]
gi|429080940|ref|ZP_19144063.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0713]
gi|444949775|ref|ZP_21268055.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0839]
gi|444955422|ref|ZP_21273475.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0848]
gi|445042529|ref|ZP_21357889.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA35]
gi|445047733|ref|ZP_21362969.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
3.4880]
gi|377888947|gb|EHU53415.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC3B]
gi|377937617|gb|EHV01393.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC4C]
gi|377956907|gb|EHV20446.1| cell division protein putative checkpoint GTPase [Escherichia coli
DEC5A]
gi|427204451|gb|EKV74727.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
88.1467]
gi|427257252|gb|EKW23383.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
95.0943]
gi|427274652|gb|EKW39299.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
96.0427]
gi|427315291|gb|EKW77295.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0672]
gi|427325915|gb|EKW87342.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0713]
gi|444554497|gb|ELV32060.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0839]
gi|444559050|gb|ELV36298.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
99.0848]
gi|444651582|gb|ELW24383.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
PA35]
gi|444656835|gb|ELW29343.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
3.4880]
Length = 207
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 5 QTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 64
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 65 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 124
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT-SS 285
+ W + I + ++ TK DK +G ++ + LN +E + F + T SS
Sbjct: 125 QMIEWAVDSNIAVLVLLTKADKL---ASGARKAQ--LNMVREAVLAF--NGDVQVETFSS 177
Query: 286 VTNQGRDEI 294
+ QG D++
Sbjct: 178 LKKQGVDKL 186
>gi|365838984|ref|ZP_09380237.1| ribosome biogenesis GTP-binding protein YsxC [Anaeroglobus
geminatus F0357]
gi|364566005|gb|EHM43711.1| ribosome biogenesis GTP-binding protein YsxC [Anaeroglobus
geminatus F0357]
Length = 215
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 101 RDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGK 160
RD + E++ S+VR + P PE A +GRSNVGKSSL+NSL RK LA S PGK
Sbjct: 4 RDIALINTEYIASAVRPDQYPDGDRPEIAFLGRSNVGKSSLINSLCNRKGLAKVSGAPGK 63
Query: 161 TQCINHF-----------RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLV 209
T+ IN F + S +LVDLPGYG+A + RT W +F DY N L+
Sbjct: 64 TRTINFFAGDIRERTDGESVRRSLFLVDLPGYGFARTGGKNRTIWSRFIGDYIKNSPRLL 123
Query: 210 SVFLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQEL 269
+ LL+D P ID E +WL N +P+ +V TK DK + +++LN+ L
Sbjct: 124 LLCLLVDLRHPGLHIDGEAYAWLRNNGVPLQIVCTKADKLNQSDR-----QKHLNEINRL 178
Query: 270 IQGFFQTAPPWIMTSSVTNQGRDEIL 295
F A P I S++ GR +++
Sbjct: 179 ----FPAAHPAIAYSALKGYGRHQLI 200
>gi|116053642|ref|YP_793969.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas
aeruginosa UCBPP-PA14]
gi|296392357|ref|ZP_06881832.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas
aeruginosa PAb1]
gi|416877921|ref|ZP_11920060.1| GTP-binding protein YsxC [Pseudomonas aeruginosa 152504]
gi|421177756|ref|ZP_15635402.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas
aeruginosa CI27]
gi|122256338|sp|Q02DL7.1|ENGB_PSEAB RecName: Full=Probable GTP-binding protein EngB
gi|115588863|gb|ABJ14878.1| putative GTP-binding protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|334839045|gb|EGM17743.1| GTP-binding protein YsxC [Pseudomonas aeruginosa 152504]
gi|404528946|gb|EKA39004.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas
aeruginosa CI27]
Length = 215
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 105/194 (54%), Gaps = 6/194 (3%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+A F+ S+ + + CP D E A GRSN GKSS LN+L LA TSKTPG+TQ +N
Sbjct: 13 KASFLISAAQVDQCPPDEGLEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNF 71
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F ++DS LVDLPGYGYA P L+ W + + Y +R++L VFL++D P D
Sbjct: 72 FALDDSRRLVDLPGYGYAKVPIPLKQHWQRHLEAYLSSRASLAGVFLMMDIRHPLTDFDR 131
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSV 286
W +Q+P+ ++ TK DK G L +E+ QG+ A + S+
Sbjct: 132 LMLDWAQASQLPIHVLMTKADKLAF----GAAKNALLKVRREVQQGWGDVATLQLF-SAP 186
Query: 287 TNQGRDEILLHMAQ 300
QG DE + +AQ
Sbjct: 187 KRQGVDEAQMVLAQ 200
>gi|355650827|ref|ZP_09056293.1| GTP-binding protein engB [Pseudomonas sp. 2_1_26]
gi|354826581|gb|EHF10792.1| GTP-binding protein engB [Pseudomonas sp. 2_1_26]
Length = 215
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 105/194 (54%), Gaps = 6/194 (3%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+A F+ S+ + + CP D E A GRSN GKSS LN+L LA TSKTPG+TQ +N
Sbjct: 13 KASFLISAAQVDQCPPDEGLEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNF 71
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F ++DS LVDLPGYGYA P L+ W + + Y +R++L VFL++D P D
Sbjct: 72 FALDDSRRLVDLPGYGYAKVPIPLKQHWQRHLEAYLSSRASLAGVFLMMDIRHPLTDFDR 131
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSV 286
W +Q+P+ ++ TK DK G L +E+ QG+ A + S+
Sbjct: 132 LMLDWAQASQLPIHVLMTKADKLAF----GAAKNALLKVRREVQQGWGDVATLQLF-SAP 186
Query: 287 TNQGRDEILLHMAQ 300
QG DE + +AQ
Sbjct: 187 KRQGVDEAQMVLAQ 200
>gi|336247957|ref|YP_004591667.1| GTP-binding protein YsxC [Enterobacter aerogenes KCTC 2190]
gi|334734013|gb|AEG96388.1| GTP-binding protein YsxC [Enterobacter aerogenes KCTC 2190]
Length = 210
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 93/167 (55%), Gaps = 5/167 (2%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + + LVDLPGYGYA P E++ W K +Y R L + +L+D P K +D
Sbjct: 68 FEVAEGKRLVDLPGYGYAQVPEEMKIKWQKALGEYLEKRLCLKGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF 273
+ W ++ I + ++ TK DK +G ++ + N+ +E +Q F
Sbjct: 128 QMIEWAVESDIQVLVLLTKADKL---ASGARKAQVNM--VREAVQAF 169
>gi|334132076|ref|ZP_08505837.1| Putative GTP-binding protein [Methyloversatilis universalis FAM5]
gi|333442722|gb|EGK70688.1| Putative GTP-binding protein [Methyloversatilis universalis FAM5]
Length = 207
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 95/187 (50%), Gaps = 6/187 (3%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A F S + P+ PE A GRSN GKSS +N+LV +LA SKTPG+TQ IN+F
Sbjct: 8 AAFHISVAKPTGLPAAAGPEIAFAGRSNAGKSSAINTLVGHTRLAFVSKTPGRTQLINYF 67
Query: 168 RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
++ +LVDLPGYG+A P E+R W + Y R +LV + L++D+ P +D
Sbjct: 68 KLVKGGFLVDLPGYGFAQVPPEVRRAWAGLIERYLKERESLVGLVLIMDSRHPLTELDWN 127
Query: 228 YASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVT 287
W Q+ PM ++ TK DK + L D + + G + SS+
Sbjct: 128 MIQWFSQSGKPMHVLLTKADKLTRSAQA-----STLADVRNQLSGMGDQVTVQLF-SSLK 181
Query: 288 NQGRDEI 294
G DE+
Sbjct: 182 KTGVDEV 188
>gi|49078162|gb|AAT49757.1| PA5492, partial [synthetic construct]
Length = 216
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 105/194 (54%), Gaps = 6/194 (3%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+A F+ S+ + + CP D E A GRSN GKSS LN+L LA TSKTPG+TQ +N
Sbjct: 13 KASFLISAAQVDQCPPDEGLEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNF 71
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F ++DS LVDLPGYGYA P L+ W + + Y +R++L VFL++D P D
Sbjct: 72 FALDDSRRLVDLPGYGYAKVPIPLKQHWQRHLEAYLSSRASLAGVFLMMDIRHPLTDFDR 131
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSV 286
W +Q+P+ ++ TK DK G L +E+ QG+ A + S+
Sbjct: 132 LMLDWAQASQLPIHVLMTKADKLAF----GAAKNALLKVRREVQQGWGDVATLQLF-SAP 186
Query: 287 TNQGRDEILLHMAQ 300
QG DE + +AQ
Sbjct: 187 KRQGVDEAQMVLAQ 200
>gi|385260655|ref|ZP_10038798.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
SK140]
gi|385190898|gb|EIF38326.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
SK140]
Length = 195
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 100/189 (52%), Gaps = 11/189 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
AE + S+ P D LPE AL GRSNVGKSS +N+++ RK LA TS PGKTQ +N
Sbjct: 7 NAEILLSAANKSHYPEDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I+D VD+PGYGYA ++ R W + ++Y R L +V L+D D+
Sbjct: 67 FNIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDV 126
Query: 227 EYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
+ +L +IP+ +V TK DK R K ++ LN F + +I+ S
Sbjct: 127 QMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLN---------FDPSDDFILFS 177
Query: 285 SVTNQGRDE 293
SVT G D+
Sbjct: 178 SVTKAGMDQ 186
>gi|372278314|ref|ZP_09514350.1| GTP-binding protein YsxC [Oceanicola sp. S124]
Length = 217
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 104/244 (42%), Gaps = 43/244 (17%)
Query: 47 PIPISHAVEPEPEPHVAISLEKLFVPPETEVSIDDSSLSTRILKGSNIVLSKYARDAQVA 106
P P++ EP+PH+A KLF P
Sbjct: 5 PFPLAE----EPDPHMAEVGRKLFAGP--------------------------------- 27
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+F+K V + P E GRSNVGKSSL+N+L RK +A S TPG+TQ IN
Sbjct: 28 -VDFLKGVVAMDGLPPADRIEVCFAGRSNVGKSSLINALTGRKGIARASNTPGRTQEINF 86
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + + YLVDLPGYGYA AP + W + K Y R TL F+LIDA K +D
Sbjct: 87 FTLGEERYLVDLPGYGYANAPLSVVEKWQRLLKQYLQGRQTLRRAFVLIDARHGVKAVDE 146
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSV 286
E L + V TK DK K E LN + + P ++TSS
Sbjct: 147 EIMKLLDSAAVTFQCVLTKADKVKLADR-----ERVLNQVRGALSKHPAAFPELVLTSSE 201
Query: 287 TNQG 290
G
Sbjct: 202 KGDG 205
>gi|149203000|ref|ZP_01879971.1| GTP-binding protein [Roseovarius sp. TM1035]
gi|149143546|gb|EDM31582.1| GTP-binding protein [Roseovarius sp. TM1035]
Length = 216
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 97/195 (49%), Gaps = 5/195 (2%)
Query: 96 LSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTS 155
+S+ R +FVK V P E GRSNVGKSSL+N+L RK LA S
Sbjct: 15 ISEQGRKLFAGPVDFVKGVVAMSGLPPADRLEVCFAGRSNVGKSSLINALTGRKALARAS 74
Query: 156 KTPGKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLI 215
TPG+TQ IN F + +S YLVDLPGYGYA AP + W K Y R TL F+L+
Sbjct: 75 NTPGRTQEINFFALGESHYLVDLPGYGYANAPLAVVQKWQALLKQYLSGRQTLRRAFVLV 134
Query: 216 DASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQ 275
DA K +D E S L + + V TK D K N R + L+ + +
Sbjct: 135 DARHGIKTVDEEIMSLLDASAVTFQCVLTKTD----KINAADR-DRVLDQVRAKLAPHPA 189
Query: 276 TAPPWIMTSSVTNQG 290
P I+TSS ++G
Sbjct: 190 AYPELILTSSEKSEG 204
>gi|429102475|ref|ZP_19164449.1| GTP-binding protein EngB [Cronobacter turicensis 564]
gi|426289124|emb|CCJ90562.1| GTP-binding protein EngB [Cronobacter turicensis 564]
Length = 211
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 88/157 (56%), Gaps = 3/157 (1%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R L + +L+D P K +D
Sbjct: 68 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENL 263
+ W + IP+ ++ TK DK +G ++ + N+
Sbjct: 128 QMIEWAVDSDIPVLVLLTKADKL---ASGARKAQLNM 161
>gi|328952831|ref|YP_004370165.1| GTP-binding protein engB [Desulfobacca acetoxidans DSM 11109]
gi|328453155|gb|AEB08984.1| GTP-binding protein engB [Desulfobacca acetoxidans DSM 11109]
Length = 199
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 105/191 (54%), Gaps = 5/191 (2%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ AEFV S+ + E P LPE A GRSNVGKSSL+N+L+ R+ L TS PG TQ
Sbjct: 5 KILSAEFVVSAHQIEQLPGGVLPEVAFWGRSNVGKSSLINALLHRQNLVRTSSRPGCTQA 64
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN+F +N W+ VDLPGYGYA AP ++ W + Y + L +V L+DA P
Sbjct: 65 INYFLVNRVWHFVDLPGYGYAQAPLPVKEKWLRLISTYLETQKRLRAVVWLLDARRQPGP 124
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
+L++ L + + +V TK DK K+ G+R +L + A +I
Sbjct: 125 EELDWLDRLRSWRQEVVVVLTKADKIKR----GQRDRRQSEIAAQLAPSGVK-AQDFIWF 179
Query: 284 SSVTNQGRDEI 294
S++T +GR E+
Sbjct: 180 STLTQEGRREL 190
>gi|429106835|ref|ZP_19168704.1| GTP-binding protein EngB [Cronobacter malonaticus 681]
gi|426293558|emb|CCJ94817.1| GTP-binding protein EngB [Cronobacter malonaticus 681]
Length = 222
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 92/167 (55%), Gaps = 5/167 (2%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 19 QTHFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 78
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R L + +L+D P K +D
Sbjct: 79 FEVADGKRLVDLPGYGYAEVPEEMKRKWKRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQ 138
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF 273
+ W + IP+ ++ TK DK +G ++ + LN +E + F
Sbjct: 139 QMIEWAVDSGIPVLVLLTKADKL---ASGARKAQ--LNMVREAVIAF 180
>gi|161984817|ref|YP_410156.2| ribosome biogenesis GTP-binding protein YsxC [Shigella boydii
Sb227]
gi|416298144|ref|ZP_11651861.1| GTP-binding protein EngB [Shigella flexneri CDC 796-83]
gi|417684635|ref|ZP_12333972.1| hypothetical protein SB359474_4457 [Shigella boydii 3594-74]
gi|420327808|ref|ZP_14829547.1| putative GTP-binding protein EngB [Shigella flexneri CCH060]
gi|420355447|ref|ZP_14856511.1| putative GTP-binding protein EngB [Shigella boydii 4444-74]
gi|119369256|sp|Q31UD0.2|ENGB_SHIBS RecName: Full=Probable GTP-binding protein EngB
gi|320185488|gb|EFW60256.1| GTP-binding protein EngB [Shigella flexneri CDC 796-83]
gi|332088563|gb|EGI93677.1| hypothetical protein SB359474_4457 [Shigella boydii 3594-74]
gi|391246193|gb|EIQ05455.1| putative GTP-binding protein EngB [Shigella flexneri CCH060]
gi|391272351|gb|EIQ31205.1| putative GTP-binding protein EngB [Shigella boydii 4444-74]
Length = 210
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 68 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRHSLQGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT-SS 285
+ W + I + ++ TK DK +G ++ + LN +E + F + T SS
Sbjct: 128 QMIEWAVDSNIAVLVLLTKADKL---ASGARKAQ--LNMVREAVLAF--NGDVQVETFSS 180
Query: 286 VTNQGRDEI 294
+ QG D++
Sbjct: 181 LKKQGVDKL 189
>gi|429737527|ref|ZP_19271385.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sp. oral
taxon 138 str. F0429]
gi|429152333|gb|EKX95163.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sp. oral
taxon 138 str. F0429]
Length = 202
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 111/205 (54%), Gaps = 17/205 (8%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +A ++ S+VR + P + P A +GRSNVGKSSL+NSL R ++LA S PGKTQ I
Sbjct: 2 ITKATYLASAVRCDQYPEERRPAVAFIGRSNVGKSSLINSLTRIRQLARVSSKPGKTQTI 61
Query: 165 NHF----RINDS-----WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLI 215
N + RI+ +LVDLPGYGYA RE R W KF ++YFL+ L V LL+
Sbjct: 62 NFYELLLRIDGGEERHPVHLVDLPGYGYAKVGRESRKTWAKFIEEYFLHAEELRFVCLLL 121
Query: 216 DASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQ 275
D D SWL ++ IP+ ++ TK DK K + + Q+ +
Sbjct: 122 DIRHTPMESDCRMFSWLVEHDIPVLVIATKADKIGKNARNAQ-----IAAIQKKLGVPEL 176
Query: 276 TAPPWIMTSSVTNQGRDEILLHMAQ 300
T P+ +S N+GR ++L MA+
Sbjct: 177 TILPY---ASPKNEGRSDLLDVMAE 198
>gi|421276985|ref|ZP_15727805.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SPAR10]
gi|395876266|gb|EJG87342.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SPAR10]
Length = 195
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 100/189 (52%), Gaps = 11/189 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
AE + S+ P D LPE AL GRSNVGKSS +N+++ RK LA TS PGKTQ +N
Sbjct: 7 NAEILLSAANKSHYPQDKLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I+D VD+PGYGYA ++ R W + ++Y R L +V L+D D+
Sbjct: 67 FNIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDV 126
Query: 227 EYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
+ +L +IP+ +V TK DK R K ++ LN F + +I+ S
Sbjct: 127 QMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLN---------FDPSDDFILFS 177
Query: 285 SVTNQGRDE 293
SVT G D+
Sbjct: 178 SVTKAGMDQ 186
>gi|32035822|ref|ZP_00135658.1| COG0218: Predicted GTPase [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|126207582|ref|YP_001052807.1| ribosome biogenesis GTP-binding protein YsxC [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|303250228|ref|ZP_07336429.1| GTPase EngB [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|307251616|ref|ZP_07533522.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|307260548|ref|ZP_07542241.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|126096374|gb|ABN73202.1| putative GTP-binding protein EngB [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|302650939|gb|EFL81094.1| GTPase EngB [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306860927|gb|EFM92934.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306869777|gb|EFN01561.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
Length = 206
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 81/142 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+ F+ S+ P D E A GRSN GKS+ LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 KTHFLTSAPDIRHLPEDNGVEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + + LVDLPGYGYAA P +++ W K +Y R L V +L+D P K +D
Sbjct: 68 FEVEPNCKLVDLPGYGYAAVPEQMKIQWQKALGEYLQKRECLRGVVILMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
+ W Q+P+ L+ TK DK
Sbjct: 128 QMIEWAVSAQLPVLLLLTKADK 149
>gi|28198564|ref|NP_778878.1| ribosome biogenesis GTP-binding protein YsxC [Xylella fastidiosa
Temecula1]
gi|386084745|ref|YP_006001027.1| ribosome biogenesis GTP-binding protein YsxC [Xylella fastidiosa
subsp. fastidiosa GB514]
gi|32129522|sp|Q87DM6.1|ENGB_XYLFT RecName: Full=Probable GTP-binding protein EngB
gi|28056648|gb|AAO28527.1| GTP-binding protein [Xylella fastidiosa Temecula1]
gi|307579692|gb|ADN63661.1| ribosome biogenesis GTP-binding protein YsxC [Xylella fastidiosa
subsp. fastidiosa GB514]
Length = 203
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 84/141 (59%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A+++ S+ PSD E A GRSN GKSS+LN+L R+ LA SKTPG+TQ + +F
Sbjct: 8 AKYLLSAHTPHQLPSDDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYF 67
Query: 168 RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
+ YLVDLPGYGYA P+EL+ W F YF +R +L + +++D P K DL+
Sbjct: 68 TVTPQRYLVDLPGYGYAKVPKELQIHWQAFIDTYFHHRQSLRGLVVVMDIRHPLKEYDLQ 127
Query: 228 YASWLGQNQIPMTLVFTKCDK 248
++ Q +P + TK DK
Sbjct: 128 MLAYARQRGLPAQALLTKADK 148
>gi|218894595|ref|YP_002443465.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas
aeruginosa LESB58]
gi|424943700|ref|ZP_18359463.1| putative GTP-binding protein [Pseudomonas aeruginosa NCMG1179]
gi|226741187|sp|B7V729.1|ENGB_PSEA8 RecName: Full=Probable GTP-binding protein EngB
gi|218774824|emb|CAW30642.1| putative GTP-binding protein [Pseudomonas aeruginosa LESB58]
gi|346060146|dbj|GAA20029.1| putative GTP-binding protein [Pseudomonas aeruginosa NCMG1179]
Length = 215
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 105/194 (54%), Gaps = 6/194 (3%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+A F+ S+ + + CP D E A GRSN GKSS LN+L LA TSKTPG+TQ +N
Sbjct: 13 KASFLISAAQVDQCPPDEGLEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNF 71
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F ++DS LVDLPGYGYA P L+ W + + Y +R++L VFL++D P D
Sbjct: 72 FALDDSRRLVDLPGYGYAKVPIPLKQHWQRHLEAYLSSRASLAGVFLMMDIRHPLTDFDR 131
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSV 286
W +Q+P+ ++ TK DK G L +E+ QG+ A + S+
Sbjct: 132 LMLDWAQASQLPIHVLMTKADKLAF----GAAKNALLKVRREVQQGWGDVATLQLF-SAP 186
Query: 287 TNQGRDEILLHMAQ 300
QG DE + +AQ
Sbjct: 187 KRQGIDEAQMVLAQ 200
>gi|182681243|ref|YP_001829403.1| ribosome biogenesis GTP-binding protein YsxC [Xylella fastidiosa
M23]
gi|417558326|ref|ZP_12209308.1| GTPase [Xylella fastidiosa EB92.1]
gi|182631353|gb|ACB92129.1| GTP-binding protein HSR1-related [Xylella fastidiosa M23]
gi|338179130|gb|EGO82094.1| GTPase [Xylella fastidiosa EB92.1]
Length = 219
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 84/141 (59%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A+++ S+ PSD E A GRSN GKSS+LN+L R+ LA SKTPG+TQ + +F
Sbjct: 24 AKYLLSAHTPHQLPSDDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYF 83
Query: 168 RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
+ YLVDLPGYGYA P+EL+ W F YF +R +L + +++D P K DL+
Sbjct: 84 TVTPQRYLVDLPGYGYAKVPKELQIHWQAFIDTYFHHRQSLRGLVVVMDIRHPLKEYDLQ 143
Query: 228 YASWLGQNQIPMTLVFTKCDK 248
++ Q +P + TK DK
Sbjct: 144 MLAYARQRGLPAQALLTKADK 164
>gi|182684523|ref|YP_001836270.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae CGSP14]
gi|322377850|ref|ZP_08052339.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
M334]
gi|226741185|sp|B2IR86.1|ENGB_STRPS RecName: Full=Probable GTP-binding protein EngB
gi|182629857|gb|ACB90805.1| GTP-binding protein [Streptococcus pneumoniae CGSP14]
gi|321281273|gb|EFX58284.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
M334]
Length = 197
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 100/189 (52%), Gaps = 11/189 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
AE + S+ P D LPE AL GRSNVGKSS +N+++ RK LA TS PGKTQ +N
Sbjct: 9 NAEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNF 68
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I+D VD+PGYGYA ++ R W + ++Y R L +V L+D D+
Sbjct: 69 FNIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDV 128
Query: 227 EYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
+ +L +IP+ +V TK DK R K ++ LN F + +I+ S
Sbjct: 129 QMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLN---------FDPSDDFILFS 179
Query: 285 SVTNQGRDE 293
SV+ G DE
Sbjct: 180 SVSKAGMDE 188
>gi|289168391|ref|YP_003446660.1| hypothetical protein smi_1558 [Streptococcus mitis B6]
gi|288907958|emb|CBJ22798.1| conserved hypothetical protein [Streptococcus mitis B6]
Length = 197
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 100/189 (52%), Gaps = 11/189 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
AE + S+ P D LPE AL GRSNVGKSS +N+++ RK LA TS PGKTQ +N
Sbjct: 9 NAEILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNF 68
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I+D VD+PGYGYA ++ R W + ++Y R L +V L+D D+
Sbjct: 69 FNIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDFRHDPSADDV 128
Query: 227 EYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
+ +L +IP+ +V TK DK R K ++ LN F + +I+ S
Sbjct: 129 QMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLN---------FDPSDDFILFS 179
Query: 285 SVTNQGRDE 293
SV+ G DE
Sbjct: 180 SVSKAGMDE 188
>gi|33151575|ref|NP_872928.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus ducreyi
35000HP]
gi|71151867|sp|Q7VNY0.1|ENGB_HAEDU RecName: Full=Probable GTP-binding protein EngB
gi|33147795|gb|AAP95317.1| conserved possible cell division GTP-binding protein [Haemophilus
ducreyi 35000HP]
Length = 210
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 95/182 (52%), Gaps = 2/182 (1%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
F+ S+ P D E A GRSN GKS+ LN+L +K LA TSKTPG+TQ IN F +
Sbjct: 15 FLTSAPDIRHLPEDNGIEIAFAGRSNAGKSTALNALTNQKSLARTSKTPGRTQLINLFEV 74
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
LVDLPGYGYAA P +++ W K +Y R L + +L+D P K +D +
Sbjct: 75 EPQCKLVDLPGYGYAAVPEQMKLQWQKALGEYLQKRDCLAGIVILMDIRHPLKDLDQQMI 134
Query: 230 SWLGQNQIPMTLVFTKCDKRKK--KKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVT 287
W Q+P+ L+ TK DK + + K E + FQ IQ +A I ++
Sbjct: 135 EWAVSAQLPVLLLLTKADKLSQVARNKTAKMVNEAILPFQGDIQVEIYSALNKIGVDKLS 194
Query: 288 NQ 289
N+
Sbjct: 195 NK 196
>gi|417923037|ref|ZP_12566511.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK569]
gi|418968520|ref|ZP_13520109.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pseudopneumoniae ATCC BAA-960]
gi|419766852|ref|ZP_14293027.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK579]
gi|342837311|gb|EGU71505.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK569]
gi|383352590|gb|EID30276.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pseudopneumoniae ATCC BAA-960]
gi|383353623|gb|EID31228.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK579]
Length = 195
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 100/189 (52%), Gaps = 11/189 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
AE + S+ P D LPE AL GRSNVGKSS +N+++ RK LA TS PGKTQ +N
Sbjct: 7 NAEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I+D VD+PGYGYA ++ R W + ++Y R L +V L+D D+
Sbjct: 67 FNIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDV 126
Query: 227 EYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
+ +L +IP+ +V TK DK R K ++ LN F + +I+ S
Sbjct: 127 QMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLN---------FDPSDDFILFS 177
Query: 285 SVTNQGRDE 293
SV+ G DE
Sbjct: 178 SVSKAGMDE 186
>gi|432855928|ref|ZP_20083552.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE144]
gi|431396613|gb|ELG80090.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli
KTE144]
Length = 210
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 81/142 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 68 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
+ W + I + ++ TK DK
Sbjct: 128 QMIEWAVDSNIAVLVLLTKADK 149
>gi|418976387|ref|ZP_13524260.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK575]
gi|383351474|gb|EID29268.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK575]
Length = 195
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 100/189 (52%), Gaps = 11/189 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
AE + S+ P D LPE AL GRSNVGKSS +N+++ RK LA TS PGKTQ +N
Sbjct: 7 NAEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I+D VD+PGYGYA ++ R W + ++Y R L +V L+D D+
Sbjct: 67 FNIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDV 126
Query: 227 EYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
+ +L +IP+ +V TK DK R K ++ LN F + +I+ S
Sbjct: 127 QMYEFLKYYEIPVIIVATKVDKIPRGKWNKHESAIKKKLN---------FDPSDDFILFS 177
Query: 285 SVTNQGRDE 293
SV+ G DE
Sbjct: 178 SVSKAGMDE 186
>gi|315221694|ref|ZP_07863610.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
anginosus F0211]
gi|421491017|ref|ZP_15938384.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
anginosus SK1138]
gi|315189181|gb|EFU22880.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
anginosus F0211]
gi|400372014|gb|EJP24963.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
anginosus SK1138]
Length = 195
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 98/188 (52%), Gaps = 11/188 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
AE + S+ P D +PE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ +N
Sbjct: 7 NAEILLSAANKSHYPQDEIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I+D VD+PGYGYA + R W K ++Y +R L +V L+D D+
Sbjct: 67 FNIDDKLRFVDVPGYGYAKVSKTERAKWGKMIEEYLTSRENLRAVVSLVDVRHEPSTDDV 126
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWIMTS 284
+ +L +IP+ +V TK D K P N ++ +I+ F +I+ S
Sbjct: 127 QMYEFLKYYEIPVIVVATKAD---------KVPRGKWNKYESVIKKKLDFDKNDDFIIFS 177
Query: 285 SVTNQGRD 292
SV G D
Sbjct: 178 SVNKDGLD 185
>gi|58617188|ref|YP_196387.1| ribosome biogenesis GTP-binding protein YsxC [Ehrlichia ruminantium
str. Gardel]
gi|75432753|sp|Q5FGZ3.1|ENGB_EHRRG RecName: Full=Probable GTP-binding protein EngB
gi|58416800|emb|CAI27913.1| Probable GTP-binding protein engB [Ehrlichia ruminantium str.
Gardel]
Length = 200
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 104/197 (52%), Gaps = 8/197 (4%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
++Q +F+ + + P +PE AL GRSNVGKSSL+N++ +K A S PG T+ I
Sbjct: 7 MSQCQFIIGATSIKSLPDFSIPEVALAGRSNVGKSSLINAITNNRKNARISSKPGCTRQI 66
Query: 165 NHFRINDS-WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
N + IN LVDLPGYGY+ A R + + Y LNR L V LLIDA + K
Sbjct: 67 NFYLINKGLMVLVDLPGYGYSKADRATVNSYICLMEYYLLNRKNLSKVVLLIDAKVGFKE 126
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT 283
IDL++ WL +QI LV TK D+ + + ++D Q F P I
Sbjct: 127 IDLDFIRWLEVHQILYQLVLTKIDRVQ-----SNVLDVIVSDVQNFNLNFI--IYPIINV 179
Query: 284 SSVTNQGRDEILLHMAQ 300
SS QG +E++ +AQ
Sbjct: 180 SSKCKQGIEELIYEIAQ 196
>gi|336430075|ref|ZP_08610031.1| GTP-binding protein engB [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336001246|gb|EGN31391.1| GTP-binding protein engB [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 214
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 99/178 (55%), Gaps = 7/178 (3%)
Query: 117 TEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLV 176
T P + LPE A G+SNVGKSSL+N+++ RK LA TS PGKTQ IN++ +ND++YLV
Sbjct: 15 TSKLPDNLLPEIAFAGKSNVGKSSLINAVMNRKSLARTSSQPGKTQTINYYNVNDAFYLV 74
Query: 177 DLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQ 236
DLPGYGYA A ++ W K + Y + L +VFLLID D + W+
Sbjct: 75 DLPGYGYAKANEAIKAQWGKMVERYLRSSKQLKTVFLLIDIRHEPSANDRQMYQWICHQG 134
Query: 237 IPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEI 294
++ TK DK N + P+ L +E ++ T I S+ T QGR+EI
Sbjct: 135 YHPVIIATKMDKL----NRSQVPKA-LKTVREGLEADKGTV--IIPFSAQTKQGREEI 185
>gi|221232329|ref|YP_002511482.1| GTP-binding protein [Streptococcus pneumoniae ATCC 700669]
gi|225861401|ref|YP_002742910.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae Taiwan19F-14]
gi|307704382|ref|ZP_07641297.1| conserved hypothetical protein [Streptococcus mitis SK597]
gi|307708345|ref|ZP_07644812.1| GTP-binding protein [Streptococcus mitis NCTC 12261]
gi|383938704|ref|ZP_09991908.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pseudopneumoniae SK674]
gi|387788625|ref|YP_006253693.1| GTP-binding protein [Streptococcus pneumoniae ST556]
gi|415700031|ref|ZP_11457762.1| hypothetical protein CGSSp4595_1568 [Streptococcus pneumoniae
459-5]
gi|415749976|ref|ZP_11477920.1| hypothetical protein CGSSpSV35_1673 [Streptococcus pneumoniae SV35]
gi|415752792|ref|ZP_11479774.1| hypothetical protein CGSSpSV36_1391 [Streptococcus pneumoniae SV36]
gi|417850059|ref|ZP_12495974.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK1080]
gi|418123906|ref|ZP_12760837.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44378]
gi|418128451|ref|ZP_12765344.1| putative GTP-binding protein EngB [Streptococcus pneumoniae NP170]
gi|418137641|ref|ZP_12774479.1| hypothetical protein SPAR24_1540 [Streptococcus pneumoniae GA11663]
gi|418178629|ref|ZP_12815212.1| hypothetical protein SPAR73_1562 [Streptococcus pneumoniae GA41565]
gi|418221598|ref|ZP_12848251.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47751]
gi|418968445|ref|ZP_13520058.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK616]
gi|419440763|ref|ZP_13980808.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA40410]
gi|419473637|ref|ZP_14013486.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA13430]
gi|254783212|sp|B8ZLT0.1|ENGB_STRPJ RecName: Full=Probable GTP-binding protein EngB
gi|254783216|sp|C1CSI8.1|ENGB_STRZT RecName: Full=Probable GTP-binding protein EngB
gi|220674790|emb|CAR69363.1| putative GTP-binding protein [Streptococcus pneumoniae ATCC 700669]
gi|225726988|gb|ACO22839.1| GTP-binding protein [Streptococcus pneumoniae Taiwan19F-14]
gi|307615791|gb|EFN94997.1| GTP-binding protein [Streptococcus mitis NCTC 12261]
gi|307622067|gb|EFO01089.1| conserved hypothetical protein [Streptococcus mitis SK597]
gi|339455392|gb|EGP67999.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK1080]
gi|353795726|gb|EHD76072.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44378]
gi|353798950|gb|EHD79273.1| putative GTP-binding protein EngB [Streptococcus pneumoniae NP170]
gi|353842688|gb|EHE22734.1| hypothetical protein SPAR73_1562 [Streptococcus pneumoniae GA41565]
gi|353874908|gb|EHE54762.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47751]
gi|353900596|gb|EHE76147.1| hypothetical protein SPAR24_1540 [Streptococcus pneumoniae GA11663]
gi|379138367|gb|AFC95158.1| GTP-binding protein [Streptococcus pneumoniae ST556]
gi|379550801|gb|EHZ15897.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA13430]
gi|379577833|gb|EHZ42750.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA40410]
gi|381308439|gb|EIC49282.1| hypothetical protein CGSSpSV36_1391 [Streptococcus pneumoniae SV36]
gi|381315022|gb|EIC55786.1| hypothetical protein CGSSp4595_1568 [Streptococcus pneumoniae
459-5]
gi|381318270|gb|EIC58995.1| hypothetical protein CGSSpSV35_1673 [Streptococcus pneumoniae SV35]
gi|383340306|gb|EID18614.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK616]
gi|383714434|gb|EID70436.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pseudopneumoniae SK674]
Length = 195
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 100/189 (52%), Gaps = 11/189 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
AE + S+ P D LPE AL GRSNVGKSS +N+++ RK LA TS PGKTQ +N
Sbjct: 7 NAEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I+D VD+PGYGYA ++ R W + ++Y R L +V L+D D+
Sbjct: 67 FNIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDV 126
Query: 227 EYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
+ +L +IP+ +V TK DK R K ++ LN F + +I+ S
Sbjct: 127 QMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLN---------FDPSDDFILFS 177
Query: 285 SVTNQGRDE 293
SV+ G DE
Sbjct: 178 SVSKAGMDE 186
>gi|149376397|ref|ZP_01894159.1| predicted GTPase [Marinobacter algicola DG893]
gi|149359238|gb|EDM47700.1| predicted GTPase [Marinobacter algicola DG893]
Length = 212
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 100/188 (53%), Gaps = 7/188 (3%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A F+ S+ R E+CP D E A GRSN GKSS +N + KLA TSKTPG+T+ IN F
Sbjct: 19 ARFLISASRLEECPPDHGSEVAFAGRSNAGKSSAINCITTNGKLARTSKTPGRTRLINFF 78
Query: 168 RIN-DSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
+N ++ LVDLPGYGYA R+++ DW + Y +R L + L++D P D
Sbjct: 79 SLNRENCRLVDLPGYGYAKVSRDMKDDWQQHLGHYLNDRRCLRGLVLVMDIRHPLTDFDQ 138
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSV 286
W N +P+ ++ TK DK K G+ + ++L FQ IM S+
Sbjct: 139 MMVEWCEHNNLPLMILATKADKLK----FGQAKTAMMGISKKLEA--FQCVEHLIMFSAT 192
Query: 287 TNQGRDEI 294
+ +G DE
Sbjct: 193 SKRGVDEC 200
>gi|407692929|ref|YP_006817718.1| GTP-binding protein YsxC [Actinobacillus suis H91-0380]
gi|407388986|gb|AFU19479.1| GTP-binding protein YsxC [Actinobacillus suis H91-0380]
Length = 206
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 80/139 (57%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
F+ S+ P D E A GRSN GKS+ LN+L +K LA TSKTPG+TQ IN F +
Sbjct: 11 FLTSAPDIRHLPEDNGVEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 70
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
+ LVDLPGYGYAA P +++ W K +Y R L V +L+D P K +D +
Sbjct: 71 EPNCKLVDLPGYGYAAVPEQMKLQWQKALGEYLQKRECLRGVVILMDIRHPLKDLDQQMI 130
Query: 230 SWLGQNQIPMTLVFTKCDK 248
W Q+P+ L+ TK DK
Sbjct: 131 EWAVSAQLPVLLLLTKADK 149
>gi|322375631|ref|ZP_08050143.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
C300]
gi|321279339|gb|EFX56380.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
C300]
Length = 197
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 100/189 (52%), Gaps = 11/189 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
AE + S+ P D LPE AL GRSNVGKSS +N+++ RK LA TS PGKTQ +N
Sbjct: 9 NAEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNF 68
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I+D VD+PGYGYA ++ R W + ++Y R L +V L+D D+
Sbjct: 69 FNIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDV 128
Query: 227 EYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
+ +L +IP+ +V TK DK R K ++ LN F + +I+ S
Sbjct: 129 QMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLN---------FDPSDDFILFS 179
Query: 285 SVTNQGRDE 293
SVT G D+
Sbjct: 180 SVTKAGMDQ 188
>gi|116872987|ref|YP_849768.1| ribosome biogenesis GTP-binding protein YsxC [Listeria welshimeri
serovar 6b str. SLCC5334]
gi|123458496|sp|A0AJ07.1|ENGB_LISW6 RecName: Full=Probable GTP-binding protein EngB
gi|116741865|emb|CAK20989.1| GTP-binding protein, putative [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 194
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 101/191 (52%), Gaps = 11/191 (5%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
V E + S+VR E P LPE+AL GRSNVGKSS +N+++RRK +A S+ PGKTQ +
Sbjct: 3 VNNVELIISAVRPEQYPETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTL 62
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N ++I ++ + VD+PGYG+A + R W + Y +R L V ++D
Sbjct: 63 NFYKIEEALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKPTED 122
Query: 225 DLEYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIM 282
D +L +IP+ +V TK DK R K + K E L+ F +++
Sbjct: 123 DRMMYEFLKYYEIPVIVVATKADKIPRSKWQKNAKIVRETLD---------FDPDDKFVL 173
Query: 283 TSSVTNQGRDE 293
SS T G+DE
Sbjct: 174 FSSETKMGKDE 184
>gi|349700018|ref|ZP_08901647.1| GTP-binding protein YsxC [Gluconacetobacter europaeus LMG 18494]
Length = 221
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 98/194 (50%), Gaps = 5/194 (2%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
FV + + P LPE A GRSNVGKSSL+N+L R+ LA S PG+T+ +N F +
Sbjct: 31 FVFGAQQLGQLPDPVLPEIAFAGRSNVGKSSLINALTGRRALARASSEPGRTKQLNFFEL 90
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
D LVD+PGYG+A A + ++ DW Y R TL V LL+D+ + K D E
Sbjct: 91 ADRLTLVDMPGYGFAKAAKAVKEDWQGMMFSYLRGRPTLRRVVLLLDSRVEVKATDQEIM 150
Query: 230 SWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQ 289
L + + +V TKCD K E + + ++ P + TSS T +
Sbjct: 151 KLLDRAAVTFQVVLTKCDVPKPAML-----EAKMREVTAIVATHAAAFPDVLATSSETGE 205
Query: 290 GRDEILLHMAQLRN 303
G E+ +A+L N
Sbjct: 206 GIAELRAELARLAN 219
>gi|335029647|ref|ZP_08523154.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis SK1076]
gi|334268944|gb|EGL87376.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis SK1076]
Length = 195
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 100/189 (52%), Gaps = 11/189 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
AE + S+ P D LPE AL GRSNVGKSS +N+++ RK LA TS PGKTQ +N
Sbjct: 7 NAEILLSAANKSHYPEDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I+D VD+PGYGYA ++ R W + ++Y R L +V L+D D+
Sbjct: 67 FNIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPTADDV 126
Query: 227 EYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
+ +L +IP+ +V TK DK R K ++ LN F + +I+ S
Sbjct: 127 QMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLN---------FDPSDDFILFS 177
Query: 285 SVTNQGRDE 293
SVT G D+
Sbjct: 178 SVTKAGMDQ 186
>gi|417791949|ref|ZP_12439362.1| GTP-binding protein YsxC [Cronobacter sakazakii E899]
gi|449310240|ref|YP_007442596.1| GTP-binding protein YsxC [Cronobacter sakazakii SP291]
gi|333953934|gb|EGL71823.1| GTP-binding protein YsxC [Cronobacter sakazakii E899]
gi|449100273|gb|AGE88307.1| GTP-binding protein YsxC [Cronobacter sakazakii SP291]
Length = 211
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 92/167 (55%), Gaps = 5/167 (2%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R L + +L+D P K +D
Sbjct: 68 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF 273
+ W + IP+ ++ TK DK +G ++ + LN +E + F
Sbjct: 128 QMIEWAVDSGIPVLVLLTKADKL---ASGARKAQ--LNMVREAVIAF 169
>gi|161617123|ref|YP_001591088.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Paratyphi B str. SPB7]
gi|417369477|ref|ZP_12140656.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|417542924|ref|ZP_12194243.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|189037187|sp|A9MYC7.1|ENGB_SALPB RecName: Full=Probable GTP-binding protein EngB
gi|161366487|gb|ABX70255.1| hypothetical protein SPAB_04962 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|353584163|gb|EHC44347.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|353657725|gb|EHC98092.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
Length = 210
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 82/142 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVMSAPDIRHLPSDRGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 68 FEVVDGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
+ W ++ I + ++ TK DK
Sbjct: 128 QMIQWAVESNIQVLVLLTKADK 149
>gi|417745485|ref|ZP_12394004.1| cell division protein putative checkpoint GTPase [Shigella flexneri
2930-71]
gi|332764612|gb|EGJ94844.1| cell division protein putative checkpoint GTPase [Shigella flexneri
2930-71]
Length = 207
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 81/142 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 5 QTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 64
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 65 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 124
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
+ W + I + ++ TK DK
Sbjct: 125 QMIEWAVDSNIAVLVLLTKADK 146
>gi|429211047|ref|ZP_19202213.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas sp. M1]
gi|428158461|gb|EKX05008.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas sp. M1]
Length = 219
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 83/142 (58%), Gaps = 1/142 (0%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA F+ S+ + E CP D E A GRSN GKSS LN+L LA TSKTPG+TQ +N
Sbjct: 17 QATFLISAAKVEQCPEDSGREVAFAGRSNAGKSSALNALTH-ANLARTSKTPGRTQLLNF 75
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
FR++D LVDLPGYGYA P L+ W + + Y +R +L V L++D P D
Sbjct: 76 FRLDDERRLVDLPGYGYAKVPIPLKLHWQQHLEAYLSSRESLAGVVLMMDIRHPLTEFDR 135
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
W +++P+ ++ TK DK
Sbjct: 136 LMLDWAQASRLPIHVLLTKADK 157
>gi|419891459|ref|ZP_14411544.1| GTP-binding protein YsxC [Escherichia coli O111:H8 str. CVM9570]
gi|388349888|gb|EIL15320.1| GTP-binding protein YsxC [Escherichia coli O111:H8 str. CVM9570]
Length = 210
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTDQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 68 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT-SS 285
+ W + I + ++ TK DK +G ++ + LN +E + F + T SS
Sbjct: 128 QMIEWAVDSNIAVLVLLTKADKL---ASGARKAQ--LNMVREAVLAF--NGDVQVETFSS 180
Query: 286 VTNQGRDEI 294
+ QG D++
Sbjct: 181 LKKQGVDKL 189
>gi|119369192|sp|Q0TAJ6.2|ENGB_ECOL5 RecName: Full=Probable GTP-binding protein EngB
Length = 210
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 68 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT-SS 285
+ W + I + ++ TK DK +G ++ + LN +E + F + T SS
Sbjct: 128 QMIEWAVDSNIAVLVLLTKTDKL---ASGARKAQ--LNMVREAVLAF--NGDVQVETFSS 180
Query: 286 VTNQGRDEI 294
+ QG D++
Sbjct: 181 LKKQGVDKL 189
>gi|161486407|ref|NP_839017.2| ribosome biogenesis GTP-binding protein YsxC [Shigella flexneri 2a
str. 2457T]
gi|384545466|ref|YP_005729530.1| putative GTP-binding protein engB [Shigella flexneri 2002017]
gi|415859080|ref|ZP_11533405.1| hypothetical protein SF2457T_4463 [Shigella flexneri 2a str. 2457T]
gi|417704312|ref|ZP_12353411.1| hypothetical protein SFK218_4644 [Shigella flexneri K-218]
gi|417709607|ref|ZP_12358625.1| hypothetical protein SFVA6_4456 [Shigella flexneri VA-6]
gi|417725186|ref|ZP_12373975.1| hypothetical protein SFK304_4498 [Shigella flexneri K-304]
gi|417730556|ref|ZP_12379241.1| hypothetical protein SFK671_4264 [Shigella flexneri K-671]
gi|417735520|ref|ZP_12384161.1| hypothetical protein SF274771_4128 [Shigella flexneri 2747-71]
gi|418259219|ref|ZP_12882221.1| cell division protein putative checkpoint GTPase [Shigella flexneri
6603-63]
gi|420333499|ref|ZP_14835137.1| putative GTP-binding protein EngB [Shigella flexneri K-1770]
gi|420343954|ref|ZP_14845417.1| putative GTP-binding protein EngB [Shigella flexneri K-404]
gi|420376421|ref|ZP_14876169.1| putative GTP-binding protein EngB [Shigella flexneri 1235-66]
gi|119369258|sp|Q83PF4.5|ENGB_SHIFL RecName: Full=Probable GTP-binding protein EngB
gi|281603253|gb|ADA76237.1| putative GTP-binding protein engB [Shigella flexneri 2002017]
gi|313647097|gb|EFS11552.1| hypothetical protein SF2457T_4463 [Shigella flexneri 2a str. 2457T]
gi|332751497|gb|EGJ81898.1| hypothetical protein SFK671_4264 [Shigella flexneri K-671]
gi|332753187|gb|EGJ83570.1| hypothetical protein SF274771_4128 [Shigella flexneri 2747-71]
gi|332997588|gb|EGK17203.1| hypothetical protein SFVA6_4456 [Shigella flexneri VA-6]
gi|332998615|gb|EGK18212.1| hypothetical protein SFK218_4644 [Shigella flexneri K-218]
gi|333013840|gb|EGK33202.1| hypothetical protein SFK304_4498 [Shigella flexneri K-304]
gi|391245467|gb|EIQ04735.1| putative GTP-binding protein EngB [Shigella flexneri K-1770]
gi|391263275|gb|EIQ22285.1| putative GTP-binding protein EngB [Shigella flexneri K-404]
gi|391303792|gb|EIQ61622.1| putative GTP-binding protein EngB [Shigella flexneri 1235-66]
gi|397894871|gb|EJL11311.1| cell division protein putative checkpoint GTPase [Shigella flexneri
6603-63]
Length = 210
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 81/142 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 68 FEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
+ W + I + ++ TK DK
Sbjct: 128 QMIEWAVDSNIAVLVLLTKADK 149
>gi|297544145|ref|YP_003676447.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|296841920|gb|ADH60436.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 192
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 84/148 (56%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ EF +S+ E P D LP+ + GRSNVGKS+L+N+++ RK LA TS PGKT+
Sbjct: 2 KIKTVEFTRSAFNEEQYPKDDLPQIVIAGRSNVGKSTLINTVLNRKNLAKTSSKPGKTRG 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN + IN+ +YLVDLPGYGYA +E++ W + + L LLID
Sbjct: 62 INFYLINNKFYLVDLPGYGYAKVSKEMKKQWAHNIETFLNTSRNLRHGLLLIDIRRVPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKK 251
DL +W +P T+V TK DK K
Sbjct: 122 DDLLMINWFKYKNLPFTVVLTKADKVSK 149
>gi|425064233|ref|ZP_18467358.1| GTP-binding proteingB [Pasteurella multocida subsp. gallicida X73]
gi|425066394|ref|ZP_18469514.1| GTP-binding proteingB [Pasteurella multocida subsp. gallicida
P1059]
gi|404381407|gb|EJZ77881.1| GTP-binding proteingB [Pasteurella multocida subsp. gallicida X73]
gi|404381610|gb|EJZ78079.1| GTP-binding proteingB [Pasteurella multocida subsp. gallicida
P1059]
Length = 205
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 80/139 (57%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
F+ S+ P D E A GRSN GKS+ LN+L +K LA TSKTPG+TQ IN F +
Sbjct: 13 FLTSAPDIRALPEDSGIEIAFAGRSNAGKSTALNALTNQKSLARTSKTPGRTQLINLFEV 72
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
LVDLPGYGYAA P +++ W K +Y R L V +L+D P K +D +
Sbjct: 73 EPQCRLVDLPGYGYAAVPEQMKIQWQKALGEYLQKRQCLAGVVILMDIRHPLKDLDQQMI 132
Query: 230 SWLGQNQIPMTLVFTKCDK 248
W +++P+ L+ TK DK
Sbjct: 133 EWAVASELPVLLLLTKADK 151
>gi|342164187|ref|YP_004768826.1| GTP-binding protein YsxC [Streptococcus pseudopneumoniae IS7493]
gi|341934069|gb|AEL10966.1| GTP-binding protein YsxC [Streptococcus pseudopneumoniae IS7493]
Length = 195
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 100/189 (52%), Gaps = 11/189 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
AE + S+ P D LPE AL GRSNVGKSS +N+++ RK LA TS PGKTQ +N
Sbjct: 7 NAEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I+D VD+PGYGYA ++ R W + ++Y R L +V L+D D+
Sbjct: 67 FNIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDV 126
Query: 227 EYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
+ +L +IP+ +V TK DK R K ++ LN F + +I+ S
Sbjct: 127 QMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLN---------FDPSDDFILFS 177
Query: 285 SVTNQGRDE 293
SV+ G DE
Sbjct: 178 SVSKAGMDE 186
>gi|417692307|ref|ZP_12341505.1| putative GTP-binding protein [Shigella boydii 5216-82]
gi|332084079|gb|EGI89284.1| putative GTP-binding protein [Shigella boydii 5216-82]
Length = 210
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 68 FEVADGKCLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT-SS 285
+ W + I + ++ TK DK +G ++ + LN +E + F + T SS
Sbjct: 128 QMIEWAVDSNIAVLVLLTKADKL---ASGARKAQ--LNMVREAVLAF--NGDVQVETFSS 180
Query: 286 VTNQGRDEI 294
+ QG D++
Sbjct: 181 LKKQGVDKL 189
>gi|322387324|ref|ZP_08060934.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis ATCC 700779]
gi|419842677|ref|ZP_14366014.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis ATCC 700779]
gi|321141853|gb|EFX37348.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis ATCC 700779]
gi|385703622|gb|EIG40735.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis ATCC 700779]
Length = 195
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 100/189 (52%), Gaps = 11/189 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
AE + S+ P D LPE AL GRSNVGKSS +N+++ RK LA TS PGKTQ +N
Sbjct: 7 NAEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I+D VD+PGYGYA ++ R W + ++Y R L +V L+D D+
Sbjct: 67 FNIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPTADDV 126
Query: 227 EYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
+ +L +IP+ +V TK DK R K ++ LN F + +I+ S
Sbjct: 127 QMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLN---------FDPSDDFILFS 177
Query: 285 SVTNQGRDE 293
SVT G D+
Sbjct: 178 SVTKAGMDQ 186
>gi|343518679|ref|ZP_08755669.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus
pittmaniae HK 85]
gi|343393594|gb|EGV06149.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus
pittmaniae HK 85]
Length = 205
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 83/142 (58%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+ F+ S+ P+D E A GRSN GKS+ LN+L +K LA TSKTPG+TQ IN
Sbjct: 10 KTHFLTSAPNIRAIPADEGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINL 69
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + + LVDLPGYGYAA P +++ W K +Y +R L + +L+D P K +D
Sbjct: 70 FEVENGCKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQHRQCLAGLVVLMDIRHPLKDLDQ 129
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
+ W ++P+ L+ TK DK
Sbjct: 130 QMIDWAVSAELPVLLLLTKADK 151
>gi|254237827|ref|ZP_04931150.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|386061670|ref|YP_005978192.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas
aeruginosa M18]
gi|392987216|ref|YP_006485803.1| GTP-binding protein YsxC [Pseudomonas aeruginosa DK2]
gi|419757306|ref|ZP_14283650.1| GTP-binding protein YsxC [Pseudomonas aeruginosa PADK2_CF510]
gi|126169758|gb|EAZ55269.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|347307976|gb|AEO78090.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas
aeruginosa M18]
gi|384396347|gb|EIE42766.1| GTP-binding protein YsxC [Pseudomonas aeruginosa PADK2_CF510]
gi|392322721|gb|AFM68101.1| GTP-binding protein YsxC [Pseudomonas aeruginosa DK2]
Length = 215
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 105/194 (54%), Gaps = 6/194 (3%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+A F+ S+ + + CP D E A GRSN GKSS LN+L LA TSKTPG+TQ +N
Sbjct: 13 KASFLISAAQVDQCPPDEGLEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNF 71
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F ++DS LVDLPGYGYA P L+ W + + Y +R++L VFL++D P D
Sbjct: 72 FVLDDSRRLVDLPGYGYAKVPIPLKQHWQRHLEAYLSSRASLAGVFLMMDIRHPLTDFDR 131
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSV 286
W +Q+P+ ++ TK DK G L +E+ QG+ A + S+
Sbjct: 132 LMLDWAQASQLPIHVLMTKADKLAF----GAAKNALLKVRREVQQGWGDVATLQLF-SAP 186
Query: 287 TNQGRDEILLHMAQ 300
QG DE + +AQ
Sbjct: 187 KRQGVDEAQMVLAQ 200
>gi|15603376|ref|NP_246450.1| ribosome biogenesis GTP-binding protein YsxC [Pasteurella multocida
subsp. multocida str. Pm70]
gi|378775364|ref|YP_005177607.1| ribose biogenesis GTP-binding protein YsxC [Pasteurella multocida
36950]
gi|383311366|ref|YP_005364176.1| ribose biogenesis GTP-binding protein YsxC [Pasteurella multocida
subsp. multocida str. HN06]
gi|386835386|ref|YP_006240704.1| GTP-binding protein YihA [Pasteurella multocida subsp. multocida
str. 3480]
gi|417851571|ref|ZP_12497293.1| GTP-binding protein YsxC [Pasteurella multocida subsp. gallicida
str. Anand1_poultry]
gi|13431508|sp|P57947.1|ENGB_PASMU RecName: Full=Probable GTP-binding protein EngB
gi|12721898|gb|AAK03595.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
gi|338219164|gb|EGP04858.1| GTP-binding protein YsxC [Pasteurella multocida subsp. gallicida
str. Anand1_poultry]
gi|356597912|gb|AET16638.1| ribose biogenesis GTP-binding protein YsxC [Pasteurella multocida
36950]
gi|380872638|gb|AFF25005.1| ribose biogenesis GTP-binding protein YsxC [Pasteurella multocida
subsp. multocida str. HN06]
gi|385202090|gb|AFI46945.1| GTP-binding protein YihA [Pasteurella multocida subsp. multocida
str. 3480]
Length = 205
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 80/139 (57%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
F+ S+ P D E A GRSN GKS+ LN+L +K LA TSKTPG+TQ IN F +
Sbjct: 13 FLTSAPDIRALPEDSGIEIAFAGRSNAGKSTALNALTNQKSLARTSKTPGRTQLINLFEV 72
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
LVDLPGYGYAA P +++ W K +Y R L V +L+D P K +D +
Sbjct: 73 EPQCRLVDLPGYGYAAVPEQMKIQWQKALGEYLQKRQCLAGVVILMDIRHPLKDLDQQMI 132
Query: 230 SWLGQNQIPMTLVFTKCDK 248
W +++P+ L+ TK DK
Sbjct: 133 EWAVASELPVLLLLTKADK 151
>gi|315633423|ref|ZP_07888714.1| ribosome biogenesis GTP-binding protein YsxC [Aggregatibacter
segnis ATCC 33393]
gi|315477923|gb|EFU68664.1| ribosome biogenesis GTP-binding protein YsxC [Aggregatibacter
segnis ATCC 33393]
Length = 204
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 91/164 (55%), Gaps = 2/164 (1%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
F+ SS + P D E A GRSN GKS+ LN+L +K LA TSKTPG+TQ IN F +
Sbjct: 13 FLTSSPNLKSLPEDSGVEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 72
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
LVDLPGYGYAA P +++ W + +Y R L + +L+D P K +D +
Sbjct: 73 EPQCKLVDLPGYGYAAVPEQMKLQWQQALGEYLQKRECLAGIVILMDIRHPLKDLDQQMI 132
Query: 230 SWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQ 271
W +++P+ L+ TK DK + ++ K E + FQ IQ
Sbjct: 133 EWAVASKLPVLLLLTKADKLSQSERSKQVKMVREAILPFQGDIQ 176
>gi|85860199|ref|YP_462401.1| ribosome biogenesis GTP-binding protein YsxC [Syntrophus
aciditrophicus SB]
gi|119369274|sp|Q2LVW9.1|ENGB_SYNAS RecName: Full=Probable GTP-binding protein EngB
gi|85723290|gb|ABC78233.1| GTP-binding protein [Syntrophus aciditrophicus SB]
Length = 196
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 80/145 (55%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
++ EFVKS+ P LPE A VGRSNVGKSSL+N+L+RRK+LA TS TPG+TQ
Sbjct: 2 KIVTVEFVKSATLPSGYPPGSLPEVAFVGRSNVGKSSLINTLLRRKQLARTSNTPGRTQL 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
IN F +N VDLPGYG+A P ++ +W + Y +R L V ++D
Sbjct: 62 INFFNVNQELLFVDLPGYGFARVPEAVKREWGPMIETYLRDRECLRMVVFILDIRRDPSQ 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDK 248
DL WL V TK DK
Sbjct: 122 EDLALKGWLDYYGRRTLFVLTKSDK 146
>gi|336395734|ref|ZP_08577133.1| GTP-binding protein YsxC [Lactobacillus farciminis KCTC 3681]
Length = 194
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 87/150 (58%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
QV S+V ++ P +G PE AL+GRSNVGKSSL+N+L+ RK A TS TPGKTQ
Sbjct: 2 QVNNVSMNLSAVSSKQYPDEGYPEIALLGRSNVGKSSLINTLINRKSFARTSSTPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + I D YLVD+PGYG+A ++ R ++ ++Y R L V +L+D
Sbjct: 62 LNFYNIEDQLYLVDVPGYGFAKVSKKQREEFGAMIEEYLTTRKVLKGVVILVDGRRSPSD 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D+ ++ IP +V TK DK K+ +
Sbjct: 122 DDVSMYQFVSYYHIPTLIVATKMDKVKRNQ 151
>gi|355676851|ref|ZP_09060347.1| GTP-binding protein engB [Clostridium citroniae WAL-17108]
gi|354813440|gb|EHE98051.1| GTP-binding protein engB [Clostridium citroniae WAL-17108]
Length = 193
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 117 TEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLV 176
T P + LPEFA G+SNVGKSSL+N+L+ RK A TS +PGKTQ IN + IND+ Y V
Sbjct: 15 TSKLPENTLPEFAFSGKSNVGKSSLINALMNRKAYARTSSSPGKTQTINFYNINDALYYV 74
Query: 177 DLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQ 236
DLPGYGYA E + W K + Y N S L VFLL+D D W+ N
Sbjct: 75 DLPGYGYAKVALEAKEKWGKMIERYLKNSSMLKMVFLLVDIRHEPSANDKMMYDWIIYNG 134
Query: 237 IPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQGRDEI 294
++ TK DK R + + K + L +E I I S+ T QGRDEI
Sbjct: 135 YHPVIIATKLDKINRSQIQKHVKMIRQGLGMEKEGI---------LIPFSAETKQGRDEI 185
>gi|322391569|ref|ZP_08065038.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus peroris
ATCC 700780]
gi|321145652|gb|EFX41044.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus peroris
ATCC 700780]
Length = 195
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 100/189 (52%), Gaps = 11/189 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
AE + S+ P D LPE AL GRSNVGKSS +N+++ RK LA TS PGKTQ +N
Sbjct: 7 NAEILLSAANKSHYPEDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I+D VD+PGYGYA ++ R W + ++Y R L +V L+D D+
Sbjct: 67 FNIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDFRHDPSADDV 126
Query: 227 EYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
+ +L +IP+ +V TK DK R K ++ LN F + +I+ S
Sbjct: 127 QMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLN---------FDPSDDFILFS 177
Query: 285 SVTNQGRDE 293
SVT G D+
Sbjct: 178 SVTKAGMDQ 186
>gi|304399054|ref|ZP_07380923.1| ribosome biogenesis GTP-binding protein YsxC [Pantoea sp. aB]
gi|440758547|ref|ZP_20937711.1| GTP-binding protein EngB [Pantoea agglomerans 299R]
gi|304353514|gb|EFM17892.1| ribosome biogenesis GTP-binding protein YsxC [Pantoea sp. aB]
gi|436427721|gb|ELP25394.1| GTP-binding protein EngB [Pantoea agglomerans 299R]
Length = 211
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 82/139 (58%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
FV S+ P+D E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN F +
Sbjct: 11 FVMSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 70
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
+ LVDLPGYGYA P E++ W + +Y R L + +L+D P K +D +
Sbjct: 71 KEGKRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRQALKGLVILMDIRHPLKDLDRQMI 130
Query: 230 SWLGQNQIPMTLVFTKCDK 248
+W ++ IP+ L+ TK DK
Sbjct: 131 NWSVESGIPVLLLLTKADK 149
>gi|437833714|ref|ZP_20844795.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|435302021|gb|ELO78013.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
Length = 211
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 101/188 (53%), Gaps = 6/188 (3%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVMSAPDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 68 FEVVDGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSV 286
+ W ++ I + ++ TK DK +G ++ + LN +E + F SS+
Sbjct: 128 QMIQWAVESNIQVLVLLTKADKL---ASGARKAQ--LNMVREAVLAFNGDVQVEAF-SSL 181
Query: 287 TNQGRDEI 294
QG D++
Sbjct: 182 KKQGVDKL 189
>gi|120556475|ref|YP_960826.1| HSR1-like GTP-binding protein [Marinobacter aquaeolei VT8]
gi|387815855|ref|YP_005431348.1| GTPase [Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|120326324|gb|ABM20639.1| cell division checkpoint GTPase YihA [Marinobacter aquaeolei VT8]
gi|381340878|emb|CCG96925.1| GTP-binding protein involved in coordination of cell cycle
[Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 214
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 101/188 (53%), Gaps = 7/188 (3%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A F+ S+ + ++CP D E A GRSN GKSS LN++ KLA TSKTPG+T+ IN F
Sbjct: 15 ARFLISASKLDECPPDHGAEVAFAGRSNAGKSSALNAITANGKLARTSKTPGRTRLINFF 74
Query: 168 RIN-DSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
+N + LVDLPGYGYA R+++ DW + Y +R L + L++D P D
Sbjct: 75 SLNREHARLVDLPGYGYAKVSRDMKDDWQQHLGHYLNDRRCLRGLVLVMDIRHPLTDFDQ 134
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSV 286
W N +P+ ++ TK DK K G+ L ++L + +Q IM S+
Sbjct: 135 MMVEWCEHNHLPLMILATKADKLK----FGQAKTAMLGIAKKLKE--YQCVEHLIMFSAT 188
Query: 287 TNQGRDEI 294
+ +G DE
Sbjct: 189 SKRGVDEC 196
>gi|165975551|ref|YP_001651144.1| ribosome biogenesis GTP-binding protein YsxC [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|303251917|ref|ZP_07338088.1| GTPase EngB [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|307244896|ref|ZP_07526994.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|307247073|ref|ZP_07529126.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
gi|307249295|ref|ZP_07531290.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|307258306|ref|ZP_07540048.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|307262677|ref|ZP_07544306.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|165875652|gb|ABY68700.1| GTP-binding protein [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
gi|302649347|gb|EFL79532.1| GTPase EngB [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|306854218|gb|EFM86425.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|306856442|gb|EFM88592.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
gi|306858694|gb|EFM90755.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|306867645|gb|EFM99491.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306872005|gb|EFN03720.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 206
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 81/142 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+ F+ S+ P D E A GRSN GKS+ LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 KTHFLTSAPDIRHLPEDNGVEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + + LVDLPGYGYAA P +++ W K +Y R L V +L+D P K +D
Sbjct: 68 FEVEPNCKLVDLPGYGYAAVPEQMKLQWQKALGEYLQKRECLRGVVILMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
+ W Q+P+ L+ TK DK
Sbjct: 128 QMIEWAVSAQLPVLLLLTKADK 149
>gi|372277220|ref|ZP_09513256.1| GTP-binding protein YsxC [Pantoea sp. SL1_M5]
gi|390437334|ref|ZP_10225872.1| GTP-binding protein YsxC [Pantoea agglomerans IG1]
Length = 211
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 81/139 (58%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
FV S+ P+D E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN F +
Sbjct: 11 FVMSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 70
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
+ LVDLPGYGYA P E++ W + +Y R L + +L+D P K +D +
Sbjct: 71 KEGKRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRQALKGLVILMDIRHPLKDLDRQMI 130
Query: 230 SWLGQNQIPMTLVFTKCDK 248
W ++ IP+ L+ TK DK
Sbjct: 131 QWSVESGIPVLLLLTKADK 149
>gi|297569324|ref|YP_003690668.1| ribosome biogenesis GTP-binding protein YsxC [Desulfurivibrio
alkaliphilus AHT2]
gi|296925239|gb|ADH86049.1| ribosome biogenesis GTP-binding protein YsxC [Desulfurivibrio
alkaliphilus AHT2]
Length = 200
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 96/193 (49%), Gaps = 10/193 (5%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
QV + FV S P LPE A GRSNVGKSSLLN L+RRK L S PGKTQ
Sbjct: 3 QVEKVSFVDSVFSLAQLPVGDLPEIAFAGRSNVGKSSLLNCLLRRKNLVKVSARPGKTQS 62
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + + D +LVDLPGYG+A + L+ W + Y R L V L+ID K
Sbjct: 63 LNFYLVGDQLHLVDLPGYGFARVDKRLQAKWQELITAYLETRPNLRCVVLIIDLRHALKE 122
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPP-WIM 282
D A WL IP V+TK DK + + + L+ +P ++
Sbjct: 123 SDRMLAGWLQAQGIPWLPVYTKKDKLSRNQQQRQ---------ARLLDAALGVSPKDRLL 173
Query: 283 TSSVTNQGRDEIL 295
SS++ +GR E+L
Sbjct: 174 FSSLSGEGRQELL 186
>gi|313665181|ref|YP_004047052.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma leachii
PG50]
gi|392389005|ref|YP_005907414.1| GTP-binding protein engB [Mycoplasma leachii 99/014/6]
gi|312949369|gb|ADR23965.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma leachii
PG50]
gi|339276650|emb|CBV67229.1| Probable GTP-binding protein engB [Mycoplasma leachii 99/014/6]
Length = 196
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 94/167 (56%), Gaps = 3/167 (1%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ QA F+ S+ + +D + E L+GRSNVGKSS +NSL KLA S TPGKT+ +
Sbjct: 2 IKQASFITSAANKNNWINDDVSEICLIGRSNVGKSSFINSLTNNNKLAKISNTPGKTRLL 61
Query: 165 NHFRINDSWY-LVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
N F IN Y LVD PGYGYA L+ + K ++YF+NR L VFLL+D
Sbjct: 62 NFFEINKGEYRLVDAPGYGYAKVDDNLKIQFAKMMEEYFINRKNLKGVFLLLDLRHKPSN 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK--NGGKRPEENLNDFQE 268
D+ +L IP+ ++ TK DK K+ + K +E +N +QE
Sbjct: 122 DDVMMYQFLKHYNIPVVIIGTKLDKLKRNEYIKNEKMIKETINFYQE 168
>gi|330993394|ref|ZP_08317329.1| putative GTP-binding protein engB [Gluconacetobacter sp. SXCC-1]
gi|329759424|gb|EGG75933.1| putative GTP-binding protein engB [Gluconacetobacter sp. SXCC-1]
Length = 221
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 98/194 (50%), Gaps = 5/194 (2%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
FV + + P LPE A GRSNVGKSSL+N+L R+ LA S PG+T+ +N F +
Sbjct: 30 FVFGAQKLGQLPDPILPEIAFAGRSNVGKSSLINALTGRRALARASSEPGRTKQLNFFEM 89
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
LVD+PGYG+A A R ++ DW Y R TL V LL+D+ + K D E
Sbjct: 90 AHRLTLVDMPGYGFAKAARAVKEDWQGMMFSYLRGRPTLRRVVLLLDSRVEVKASDREIM 149
Query: 230 SWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVTNQ 289
L + + +V TKCD K K L + E++ P + TSS T
Sbjct: 150 KMLDRAAVTFQVVLTKCDVPKPNALAAK-----LREVSEIVATHAAAFPHVLATSSETGL 204
Query: 290 GRDEILLHMAQLRN 303
G +++ +A+L N
Sbjct: 205 GIEDLRAELARLAN 218
>gi|284009009|emb|CBA75939.1| probable GTP-binding protein [Arsenophonus nasoniae]
Length = 208
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 82/142 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q +FV S+ P+D E A GRSN GKSS LN+L ++K LA TSKTPG+TQ IN
Sbjct: 11 QTKFVTSAPDIHHLPNDHGIEIAFAGRSNAGKSSALNALTQQKNLARTSKTPGRTQLINL 70
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + + LVDLPGYGYA P ++ W + +Y R L + +L+D P K +D+
Sbjct: 71 FEVAEGIRLVDLPGYGYAEVPESVKRQWQQALSEYLQKRKCLKGLIILMDIRHPLKDMDI 130
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
+ W IP+ ++ TK DK
Sbjct: 131 QMIEWSVAMNIPILILLTKADK 152
>gi|307256115|ref|ZP_07537902.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306865296|gb|EFM97192.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
Length = 206
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 81/142 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+ F+ S+ P D E A GRSN GKS+ LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 KTHFLTSAPDIRHLPEDNGVEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + + LVDLPGYGYAA P +++ W K +Y R L V +L+D P K +D
Sbjct: 68 FEVEPNCKLVDLPGYGYAAVPEQMKLQWQKALGEYLQKRECLHGVVILMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
+ W Q+P+ L+ TK DK
Sbjct: 128 QMIEWAVSAQLPVLLLLTKADK 149
>gi|289812207|ref|ZP_06542836.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Typhi str. AG3]
Length = 163
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 82/142 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVMSAPDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 68 FEVVDGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
+ W ++ I + ++ TK DK
Sbjct: 128 QMIQWAVESNIQVLVLLTKADK 149
>gi|83950485|ref|ZP_00959218.1| GTP-binding protein [Roseovarius nubinhibens ISM]
gi|83838384|gb|EAP77680.1| GTP-binding protein [Roseovarius nubinhibens ISM]
Length = 216
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 94/186 (50%), Gaps = 5/186 (2%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ + +F+K V P E GRSNVGKSSL+N+L RK LA S TPG+TQ +
Sbjct: 24 LGEVDFLKGVVAMSGLPPADRIEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEV 83
Query: 165 NHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPI 224
N F + DS YLVDLPGYGYA AP + W K Y R+ L F+LIDA K +
Sbjct: 84 NFFTMADSHYLVDLPGYGYANAPLPIVAKWQALLKSYLSGRANLRRAFVLIDARHGVKAV 143
Query: 225 DLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
D E + L + + V TK DK K+ + E+ L + + P I+TS
Sbjct: 144 DEEIMALLDSSAVTFQTVLTKADKVKEAER-----EKILTQVRSRLATHPAAFPELIVTS 198
Query: 285 SVTNQG 290
S G
Sbjct: 199 SEKGWG 204
>gi|406669484|ref|ZP_11076754.1| ribosome biogenesis GTP-binding protein YsxC [Facklamia ignava CCUG
37419]
gi|405583180|gb|EKB57148.1| ribosome biogenesis GTP-binding protein YsxC [Facklamia ignava CCUG
37419]
Length = 194
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 87/145 (60%)
Query: 109 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFR 168
E + S+V P+ LPE AL GRSNVGKSS +N++V R+ +A TS PGKTQ +N +
Sbjct: 7 EMLTSAVSPAQYPAPNLPEIALAGRSNVGKSSFINAMVGRQGVARTSSQPGKTQTLNFYE 66
Query: 169 INDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEY 228
I+ + VDLPGYGYA + R +++F DY R LV++ LL+D P +DL
Sbjct: 67 IDHQFRFVDLPGYGYARVSKRERERFNQFISDYLHQRENLVALLLLMDFRHPPTVLDLGM 126
Query: 229 ASWLGQNQIPMTLVFTKCDKRKKKK 253
+ + +IP +V TK DK K+ +
Sbjct: 127 KEFADELEIPYAIVTTKIDKIKRSQ 151
>gi|407979344|ref|ZP_11160161.1| GTP-binding protein YsxC [Bacillus sp. HYC-10]
gi|407414051|gb|EKF35718.1| GTP-binding protein YsxC [Bacillus sp. HYC-10]
Length = 195
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 88/150 (58%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +++ V S+V+ E PS GLPE AL GRSNVGKSS +NSL+ RK LA TS PGKTQ
Sbjct: 2 KVTKSDIVISAVKPEQYPSGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IND + VD+PGYG+A + R W + + Y R L +V ++D
Sbjct: 62 LNFYIINDMLHFVDVPGYGFAKVSKTEREAWGRMIETYITMREELKAVVQIVDLRHKPSV 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D+ +L +P+ ++ TK DK K K
Sbjct: 122 DDVNMYEFLKYYGVPVIVIATKADKIPKGK 151
>gi|16762431|ref|NP_458048.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Typhi str. CT18]
gi|16767266|ref|NP_462881.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|29143919|ref|NP_807261.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|56415847|ref|YP_152922.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|62182463|ref|YP_218880.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|167551521|ref|ZP_02345276.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|167995106|ref|ZP_02576196.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168232924|ref|ZP_02657982.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|168237615|ref|ZP_02662673.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|168244253|ref|ZP_02669185.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|168263108|ref|ZP_02685081.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|168467330|ref|ZP_02701167.1| putative GTP-binding protein EngB [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|194447921|ref|YP_002048005.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194468507|ref|ZP_03074491.1| putative GTP-binding protein EngB [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194736984|ref|YP_002116922.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|197251708|ref|YP_002148921.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197264265|ref|ZP_03164339.1| putative GTP-binding protein EngB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|200387738|ref|ZP_03214350.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|204930344|ref|ZP_03221321.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|213162853|ref|ZP_03348563.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str.
E00-7866]
gi|213425461|ref|ZP_03358211.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str.
E02-1180]
gi|213581475|ref|ZP_03363301.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str.
E98-0664]
gi|213609177|ref|ZP_03369003.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str.
E98-2068]
gi|213650654|ref|ZP_03380707.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str.
J185]
gi|213852344|ref|ZP_03381876.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str.
M223]
gi|238913941|ref|ZP_04657778.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Tennessee
str. CDC07-0191]
gi|289829362|ref|ZP_06546974.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Typhi str. E98-3139]
gi|374979493|ref|ZP_09720828.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|375116811|ref|ZP_09761981.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SCSA50]
gi|378452905|ref|YP_005240265.1| GTPase EngB [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|378961777|ref|YP_005219263.1| GTP-binding protein engB [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|378986685|ref|YP_005249841.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|378991282|ref|YP_005254446.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
gi|379703243|ref|YP_005244971.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Typhimurium str. ST4/74]
gi|383498602|ref|YP_005399291.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|386589359|ref|YP_006085759.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|416427171|ref|ZP_11693394.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 315996572]
gi|416432229|ref|ZP_11696063.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-1]
gi|416435817|ref|ZP_11698030.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-3]
gi|416448651|ref|ZP_11706478.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-4]
gi|416452811|ref|ZP_11709242.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-1]
gi|416461628|ref|ZP_11715417.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-2]
gi|416464265|ref|ZP_11716285.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 531954]
gi|416473015|ref|ZP_11719632.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|416488267|ref|ZP_11725734.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. OH_2009072675]
gi|416502051|ref|ZP_11732538.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|416505716|ref|ZP_11734091.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. SARB31]
gi|416517833|ref|ZP_11739631.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. ATCC BAA710]
gi|416529101|ref|ZP_11744128.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. LQC 10]
gi|416537559|ref|ZP_11748999.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. SARB30]
gi|416547644|ref|ZP_11754666.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 19N]
gi|416548396|ref|ZP_11754790.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 29N]
gi|416560545|ref|ZP_11761264.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 42N]
gi|416573299|ref|ZP_11767786.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 4441 H]
gi|416580265|ref|ZP_11771748.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 81038-01]
gi|416587352|ref|ZP_11776006.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. MD_MDA09249507]
gi|416592845|ref|ZP_11779562.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 414877]
gi|416600754|ref|ZP_11784645.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 366867]
gi|416605989|ref|ZP_11787391.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 413180]
gi|416616321|ref|ZP_11794002.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 446600]
gi|416622869|ref|ZP_11797170.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 609458-1]
gi|416633001|ref|ZP_11801697.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 556150-1]
gi|416645243|ref|ZP_11807354.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 609460]
gi|416649420|ref|ZP_11809837.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|416659026|ref|ZP_11814621.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 556152]
gi|416664926|ref|ZP_11816378.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. MB101509-0077]
gi|416679426|ref|ZP_11823089.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. MB102109-0047]
gi|416694485|ref|ZP_11827196.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. MB110209-0055]
gi|416704798|ref|ZP_11830489.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. MB111609-0052]
gi|416710763|ref|ZP_11834740.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009083312]
gi|416718011|ref|ZP_11840200.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009085258]
gi|416723814|ref|ZP_11844439.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 315731156]
gi|416729370|ref|ZP_11847952.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|416742239|ref|ZP_11855708.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|416743751|ref|ZP_11856325.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|416758989|ref|ZP_11863957.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008284]
gi|416764150|ref|ZP_11867807.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|416770009|ref|ZP_11871412.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|417324851|ref|ZP_12110995.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|417345053|ref|ZP_12125267.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|417353884|ref|ZP_12130467.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|417361824|ref|ZP_12135626.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|417387064|ref|ZP_12151597.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|417394578|ref|ZP_12156715.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|417415031|ref|ZP_12158797.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|417471100|ref|ZP_12167147.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|417490178|ref|ZP_12172926.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|417521737|ref|ZP_12183372.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|417535198|ref|ZP_12188756.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|418484596|ref|ZP_13053592.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 80959-06]
gi|418491979|ref|ZP_13058481.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|418494955|ref|ZP_13061401.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|418499560|ref|ZP_13065965.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|418505903|ref|ZP_13072245.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|418506970|ref|ZP_13073297.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|418526420|ref|ZP_13092397.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|418764085|ref|ZP_13320189.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35185]
gi|418764409|ref|ZP_13320507.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35199]
gi|418768918|ref|ZP_13324956.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21539]
gi|418774546|ref|ZP_13330513.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 33953]
gi|418779831|ref|ZP_13335728.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35188]
gi|418782627|ref|ZP_13338489.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21559]
gi|418800410|ref|ZP_13356063.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35202]
gi|419728714|ref|ZP_14255678.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|419733491|ref|ZP_14260388.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|419738541|ref|ZP_14265302.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|419743170|ref|ZP_14269836.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|419749260|ref|ZP_14275744.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|419786615|ref|ZP_14312339.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|419792982|ref|ZP_14318611.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|421569880|ref|ZP_16015578.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|421575613|ref|ZP_16021225.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|421578859|ref|ZP_16024431.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|421583566|ref|ZP_16029087.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|421885453|ref|ZP_16316649.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Senftenberg str. SS209]
gi|422028237|ref|ZP_16374549.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|422033288|ref|ZP_16379366.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|427556589|ref|ZP_18929872.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|427574510|ref|ZP_18934463.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|427595814|ref|ZP_18939378.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|427620389|ref|ZP_18944259.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|427644111|ref|ZP_18949147.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|427658257|ref|ZP_18953871.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|427663514|ref|ZP_18958773.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|427680611|ref|ZP_18963664.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|427801577|ref|ZP_18969122.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|440763595|ref|ZP_20942633.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|440766213|ref|ZP_20945210.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|440771511|ref|ZP_20950426.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|452122226|ref|YP_007472474.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
gi|54037056|sp|P64069.1|ENGB_SALTI RecName: Full=Probable GTP-binding protein EngB
gi|54040979|sp|P64068.1|ENGB_SALTY RecName: Full=Probable GTP-binding protein EngB
gi|75479463|sp|Q57HL3.1|ENGB_SALCH RecName: Full=Probable GTP-binding protein EngB
gi|81599694|sp|Q5PKC6.1|ENGB_SALPA RecName: Full=Probable GTP-binding protein EngB
gi|238690012|sp|B5EZX3.1|ENGB_SALA4 RecName: Full=Probable GTP-binding protein EngB
gi|238690599|sp|B4TBT8.1|ENGB_SALHS RecName: Full=Probable GTP-binding protein EngB
gi|238690710|sp|B4TPL2.1|ENGB_SALSV RecName: Full=Probable GTP-binding protein EngB
gi|25306632|pir||AG0950 ATP/GTP-binding protein [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16422563|gb|AAL22840.1| putative GTPase involved in coordination of cell cycle [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|16504736|emb|CAD03099.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139555|gb|AAO71121.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56130104|gb|AAV79610.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62130096|gb|AAX67799.1| putative GTPase, involved in coordination of cell cycle [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|194406225|gb|ACF66444.1| putative GTP-binding protein EngB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194454871|gb|EDX43710.1| putative GTP-binding protein EngB [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194712486|gb|ACF91707.1| putative GTP-binding protein EngB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195630199|gb|EDX48839.1| putative GTP-binding protein EngB [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197215411|gb|ACH52808.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197242520|gb|EDY25140.1| putative GTP-binding protein EngB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197289331|gb|EDY28696.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|199604836|gb|EDZ03381.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|204320748|gb|EDZ05950.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|205323760|gb|EDZ11599.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|205327140|gb|EDZ13904.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205332795|gb|EDZ19559.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|205336858|gb|EDZ23622.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|205348121|gb|EDZ34752.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|267996284|gb|ACY91169.1| GTPase EngB [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|312915114|dbj|BAJ39088.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|321225285|gb|EFX50343.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322613071|gb|EFY10021.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 315996572]
gi|322619142|gb|EFY16025.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-1]
gi|322626008|gb|EFY22820.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-3]
gi|322626534|gb|EFY23340.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-4]
gi|322632355|gb|EFY29103.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-1]
gi|322635165|gb|EFY31886.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-2]
gi|322642758|gb|EFY39347.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 531954]
gi|322647923|gb|EFY44395.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322650673|gb|EFY47074.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. OH_2009072675]
gi|322652856|gb|EFY49193.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322657171|gb|EFY53451.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 19N]
gi|322662343|gb|EFY58558.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 81038-01]
gi|322666878|gb|EFY63054.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. MD_MDA09249507]
gi|322672148|gb|EFY68263.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 414877]
gi|322675870|gb|EFY71942.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 366867]
gi|322681716|gb|EFY77742.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 413180]
gi|322684091|gb|EFY80100.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 446600]
gi|322716957|gb|EFZ08528.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SCSA50]
gi|323132342|gb|ADX19772.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Typhimurium str. ST4/74]
gi|323193363|gb|EFZ78578.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 609458-1]
gi|323197720|gb|EFZ82853.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 556150-1]
gi|323200708|gb|EFZ85779.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 609460]
gi|323211490|gb|EFZ96331.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 556152]
gi|323218465|gb|EGA03173.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. MB101509-0077]
gi|323221055|gb|EGA05487.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. MB102109-0047]
gi|323226030|gb|EGA10249.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. MB110209-0055]
gi|323231710|gb|EGA15822.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. MB111609-0052]
gi|323236043|gb|EGA20121.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009083312]
gi|323239537|gb|EGA23586.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009085258]
gi|323243871|gb|EGA27882.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 315731156]
gi|323249233|gb|EGA33150.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323250525|gb|EGA34408.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323258979|gb|EGA42631.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323260224|gb|EGA43847.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008284]
gi|323265343|gb|EGA48840.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323270565|gb|EGA54011.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|332990829|gb|AEF09812.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
gi|353563296|gb|EHC29688.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|353577844|gb|EHC39884.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|353582998|gb|EHC43488.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|353601496|gb|EHC57116.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|353605081|gb|EHC59689.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|353623632|gb|EHC72865.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|353623868|gb|EHC73047.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|353631133|gb|EHC78507.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|353640706|gb|EHC85624.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|353657242|gb|EHC97747.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|357953421|gb|EHJ79967.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|363552796|gb|EHL37075.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. LQC 10]
gi|363555981|gb|EHL40201.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. SARB31]
gi|363559636|gb|EHL43793.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. ATCC BAA710]
gi|363563258|gb|EHL47337.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. SARB30]
gi|363570983|gb|EHL54901.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 29N]
gi|363571999|gb|EHL55895.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 4441 H]
gi|363574650|gb|EHL58513.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 42N]
gi|366058623|gb|EHN22910.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Montevideo str. 80959-06]
gi|366058753|gb|EHN23033.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|366060617|gb|EHN24879.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|366066590|gb|EHN30750.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|366070675|gb|EHN34781.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|366081931|gb|EHN45869.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|366828758|gb|EHN55638.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|372205752|gb|EHP19259.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|374355649|gb|AEZ47410.1| GTP-binding protein engB [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|379985060|emb|CCF88922.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Senftenberg str. SS209]
gi|380465423|gb|AFD60826.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|381298835|gb|EIC39910.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|381299932|gb|EIC40999.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|381302074|gb|EIC43121.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381311662|gb|EIC52474.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|381312257|gb|EIC53061.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|383796403|gb|AFH43485.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|392618006|gb|EIX00420.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392621598|gb|EIX03952.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392730994|gb|EIZ88229.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35185]
gi|392741084|gb|EIZ98194.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21539]
gi|392743046|gb|EJA00123.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35199]
gi|392750571|gb|EJA07532.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 33953]
gi|392751475|gb|EJA08425.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35188]
gi|392759819|gb|EJA16662.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21559]
gi|392783784|gb|EJA40394.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35202]
gi|402522063|gb|EJW29394.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|402523801|gb|EJW31112.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|402526160|gb|EJW33438.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|402532056|gb|EJW39256.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|414011986|gb|EKS95919.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|414013210|gb|EKS97097.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|414013457|gb|EKS97342.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|414027140|gb|EKT10384.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|414028033|gb|EKT11234.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|414030486|gb|EKT13584.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|414041507|gb|EKT24077.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|414041874|gb|EKT24426.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|414046654|gb|EKT28971.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|414055424|gb|EKT37317.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|414061620|gb|EKT43008.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|436419381|gb|ELP17258.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|436421086|gb|ELP18936.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|436423292|gb|ELP21106.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|451911230|gb|AGF83036.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
Length = 210
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 82/142 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVMSAPDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 68 FEVVDGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
+ W ++ I + ++ TK DK
Sbjct: 128 QMIQWAVESNIQVLVLLTKADK 149
>gi|83319725|ref|YP_424232.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma capricolum
subsp. capricolum ATCC 27343]
gi|119369215|sp|Q2SSN1.1|ENGB_MYCCT RecName: Full=Probable GTP-binding protein EngB
gi|83283611|gb|ABC01543.1| GTP-binding conserved hypothetical protein [Mycoplasma capricolum
subsp. capricolum ATCC 27343]
Length = 196
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 94/167 (56%), Gaps = 3/167 (1%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ QA F+ S+ + +D + E L+GRSNVGKSS +NSL KLA S TPGKT+ +
Sbjct: 2 IKQASFITSAANKSNWINDDVSEICLIGRSNVGKSSFINSLTNNNKLAKISNTPGKTRLL 61
Query: 165 NHFRINDSWY-LVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
N F IN Y LVD PGYGYA ++ + K ++YF+NR L VFLL+D
Sbjct: 62 NFFEINKGEYRLVDAPGYGYAKVDDSIKIQFAKMMEEYFINRKNLKGVFLLLDLRHKPSN 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK--NGGKRPEENLNDFQE 268
D+ +L IP+ ++ TK DK KK + K +E +N +QE
Sbjct: 122 DDIMMYQFLKHYNIPVVIIGTKLDKLKKNEYIKNEKMIKEAINFYQE 168
>gi|422344959|ref|ZP_16425882.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas noxia
F0398]
gi|355376101|gb|EHG23362.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas noxia
F0398]
Length = 207
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 112/205 (54%), Gaps = 17/205 (8%)
Query: 105 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCI 164
+ +A ++ S+VR + P +G P A +GRSNVGKSSL+NSL R ++LA S PGKTQ I
Sbjct: 7 ITKAVYLASAVRRDQYPEEGRPAVAFIGRSNVGKSSLINSLTRIRQLARVSSKPGKTQTI 66
Query: 165 NHF----RIND-----SWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLI 215
N + RI+ S +LVDLPGYGYA A R+ R W KF ++Y L + L V LL+
Sbjct: 67 NFYELLLRIDGGAERYSVHLVDLPGYGYAKAARDSRKVWAKFIEEYLLYAAELRFVCLLL 126
Query: 216 DASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQ 275
D D +WL ++ IP+ ++ TK DK + + + + Q +
Sbjct: 127 DIRHTPMESDRRMFAWLVEHNIPVLVIATKSDKIGRNARRAR-----IAEIQRSLGVPEL 181
Query: 276 TAPPWIMTSSVTNQGRDEILLHMAQ 300
T P+ +S N+GR E+L M +
Sbjct: 182 TVLPY---ASPKNEGRSELLDVMKE 203
>gi|433461291|ref|ZP_20418901.1| GTP-binding protein YsxC [Halobacillus sp. BAB-2008]
gi|432190118|gb|ELK47161.1| GTP-binding protein YsxC [Halobacillus sp. BAB-2008]
Length = 195
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 87/148 (58%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V A+ V S+ + P D +PE AL GRSNVGKSS +N +++RK LA TS PGKTQ
Sbjct: 2 KVNTADIVISAASKKQYPKDFIPEIALAGRSNVGKSSFINRMIQRKNLARTSSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N + IND ++ VD+PGYGYA ++ R W + ++YF R L + L+ID
Sbjct: 62 LNFYIINDQFHFVDVPGYGYAKVSKKERAKWGEMMEEYFAEREQLKATALVIDVRHKPTE 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKK 251
D +L +P+ +V TK DK KK
Sbjct: 122 DDQLMYDYLKHFGLPVMVVATKLDKIKK 149
>gi|30022557|ref|NP_834188.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus ATCC
14579]
gi|206969843|ref|ZP_03230797.1| GTP-binding protein [Bacillus cereus AH1134]
gi|218232512|ref|YP_002369276.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
B4264]
gi|296504960|ref|YP_003666660.1| GTPase EngB [Bacillus thuringiensis BMB171]
gi|365158737|ref|ZP_09354929.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus sp.
7_6_55CFAA_CT2]
gi|423411736|ref|ZP_17388856.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG3O-2]
gi|423426606|ref|ZP_17403637.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG3X2-2]
gi|423432478|ref|ZP_17409482.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG4O-1]
gi|423437915|ref|ZP_17414896.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG4X12-1]
gi|423502844|ref|ZP_17479436.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus HD73]
gi|423582677|ref|ZP_17558788.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD014]
gi|423585054|ref|ZP_17561141.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD045]
gi|423631192|ref|ZP_17606939.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD154]
gi|423634658|ref|ZP_17610311.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD156]
gi|423640452|ref|ZP_17616070.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD166]
gi|423650375|ref|ZP_17625945.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD169]
gi|423657421|ref|ZP_17632720.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD200]
gi|449091434|ref|YP_007423875.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
thuringiensis serovar kurstaki str. HD73]
gi|81837282|sp|Q817Q5.1|ENGB_BACCR RecName: Full=Probable GTP-binding protein EngB
gi|226741191|sp|B7HEA1.1|ENGB_BACC4 RecName: Full=Probable GTP-binding protein EngB
gi|29898115|gb|AAP11389.1| GTP-binding protein [Bacillus cereus ATCC 14579]
gi|206735531|gb|EDZ52699.1| GTP-binding protein [Bacillus cereus AH1134]
gi|218160469|gb|ACK60461.1| GTP-binding protein [Bacillus cereus B4264]
gi|296326012|gb|ADH08940.1| GTPase EngB [Bacillus thuringiensis BMB171]
gi|363626610|gb|EHL77593.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus sp.
7_6_55CFAA_CT2]
gi|401104602|gb|EJQ12575.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG3O-2]
gi|401110522|gb|EJQ18426.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG3X2-2]
gi|401116085|gb|EJQ23928.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG4O-1]
gi|401119898|gb|EJQ27703.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG4X12-1]
gi|401211492|gb|EJR18239.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD014]
gi|401234366|gb|EJR40847.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD045]
gi|401264081|gb|EJR70194.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD154]
gi|401280637|gb|EJR86557.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD156]
gi|401280947|gb|EJR86863.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD166]
gi|401282273|gb|EJR88176.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD169]
gi|401289316|gb|EJR95033.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD200]
gi|402459809|gb|EJV91540.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus HD73]
gi|449025191|gb|AGE80354.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
thuringiensis serovar kurstaki str. HD73]
Length = 198
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 85/150 (56%)
Query: 104 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQC 163
+V +A+ V S+V+ E P LPE AL GRSNVGKSS +N ++ RKKL S PGKTQ
Sbjct: 2 KVTKADIVISAVKPEQYPDSDLPEIALAGRSNVGKSSFINKILNRKKLVRISSKPGKTQT 61
Query: 164 INHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKP 223
+N F IN+ + VD+PGYGYA + R W K + YF R L + L++D
Sbjct: 62 LNFFLINEMMHFVDVPGYGYAKVSKSERAAWGKMIETYFTTREQLDAAVLVVDLRHQPTS 121
Query: 224 IDLEYASWLGQNQIPMTLVFTKCDKRKKKK 253
D+ +L +IP ++ TK DK K K
Sbjct: 122 DDVMMYDFLKHYEIPTIIIATKADKIPKGK 151
>gi|422015975|ref|ZP_16362566.1| GTP-binding protein YsxC [Providencia burhodogranariea DSM 19968]
gi|414095630|gb|EKT57291.1| GTP-binding protein YsxC [Providencia burhodogranariea DSM 19968]
Length = 205
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 82/140 (58%)
Query: 109 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFR 168
+FV S+ P D E A GRSN GKSS LN+L ++K LA TSKTPG+TQ IN F
Sbjct: 12 KFVISAPDIRHLPKDTGIEVAFAGRSNAGKSSALNALTQQKGLARTSKTPGRTQLINLFE 71
Query: 169 INDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEY 228
+ D LVDLPGYGYA P E++ W K +Y R + + +L+D P K +D++
Sbjct: 72 VEDGIRLVDLPGYGYAEVPEEMKRKWQKALGEYLQKRECIKGLVVLMDIRHPLKDLDMQM 131
Query: 229 ASWLGQNQIPMTLVFTKCDK 248
W ++P+ ++ TK DK
Sbjct: 132 IEWSVAMEVPVLVLLTKADK 151
>gi|417093078|ref|ZP_11957467.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus suis
R61]
gi|353531974|gb|EHC01651.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus suis
R61]
Length = 206
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 102/204 (50%), Gaps = 11/204 (5%)
Query: 92 SNIVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKL 151
S ++ +Y AE + S+V P D +PE AL GRSNVGKSS +N+L+ RK L
Sbjct: 3 STLIYERYKMKINTHNAEILLSAVSKAQYPCDDIPEIALAGRSNVGKSSFINTLLGRKNL 62
Query: 152 ALTSKTPGKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSV 211
A TS PGKTQ +N + I+D VD+PGYGYA + R W K ++Y R L V
Sbjct: 63 ARTSGKPGKTQQLNFYNIDDKIRFVDVPGYGYAKVSKTERAKWGKMIEEYLTTRENLRVV 122
Query: 212 FLLIDASIPAKPIDLEYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQ 271
L+D D++ +L +IP+ +V TK D K P N + +I+
Sbjct: 123 VSLVDMRHEPSADDVQMYDFLKYYEIPVIIVATKAD---------KIPRGKWNKHESMIK 173
Query: 272 GF--FQTAPPWIMTSSVTNQGRDE 293
F +++ SS T G D+
Sbjct: 174 KRLDFDKNDQFVIFSSETRHGYDQ 197
>gi|227355156|ref|ZP_03839567.1| GTP-binding protein [Proteus mirabilis ATCC 29906]
gi|227164943|gb|EEI49790.1| GTP-binding protein [Proteus mirabilis ATCC 29906]
Length = 200
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 83/142 (58%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+A F+ S+ P D E A GRSN GKSS LN+L ++ LA TSKTPG+TQ IN
Sbjct: 22 KAHFIISAPDIRHLPPDTGIEIAFAGRSNAGKSSALNALTQQNGLARTSKTPGRTQLINL 81
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F+I + LVDLPGYGYA P E++ W + +Y R L V +L+D P K +D+
Sbjct: 82 FQIEEGRRLVDLPGYGYAQVPEEMKRKWQRSLGEYLQKRECLKGVVILMDIRHPLKDLDM 141
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
+ W +++P ++ TK DK
Sbjct: 142 QMIDWAVDSELPTLVLLTKADK 163
>gi|92115232|ref|YP_575160.1| ribosome biogenesis GTP-binding protein YsxC [Chromohalobacter
salexigens DSM 3043]
gi|119369183|sp|Q1QSU7.1|ENGB_CHRSD RecName: Full=Probable GTP-binding protein EngB
gi|91798322|gb|ABE60461.1| cell division checkpoint GTPase YihA [Chromohalobacter salexigens
DSM 3043]
Length = 207
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 108/207 (52%), Gaps = 20/207 (9%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A F+ S+ CP D E A GRSN GKSS +N+L ++K LA TSKTPG+TQ IN F
Sbjct: 12 ARFLTSAPGLAQCPPDQGAEVAFAGRSNAGKSSAINTLTQQKALARTSKTPGRTQLINFF 71
Query: 168 RI-NDSWY-LVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPID 225
+ ND Y LVDLPGYG+A P +++ +W + +Y R+TL + L++D P D
Sbjct: 72 TLANDETYRLVDLPGYGFAKVPDQVKLEWQRHLSEYLYERATLRGLMLVMDVRHPLSEFD 131
Query: 226 LEYASWLGQNQIPMTLVFTKCDKRK--KKKNGGKRPEENLNDFQEL--IQGFFQTAPPWI 281
W + +P+ ++ TK DK K K+ L D+++L +Q F
Sbjct: 132 QMMLGWADEKAMPVHILLTKADKLKPGAAKSALLAVRRQLADWEDLVSVQLF-------- 183
Query: 282 MTSSVTNQGRDEILLHMAQLRNYWLKH 308
S++ QG DE M + WL H
Sbjct: 184 --SALKRQGVDEARARM----DAWLLH 204
>gi|417938689|ref|ZP_12581984.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis SK970]
gi|343390933|gb|EGV03511.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis SK970]
Length = 195
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 100/189 (52%), Gaps = 11/189 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
AE + S+ P D LPE AL GRSNVGKSS +N+++ RK LA TS PGKTQ +N
Sbjct: 7 NAEILLSAANKSHYPEDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I+D VD+PGYGYA ++ R W + ++Y R L +V L+D D+
Sbjct: 67 FNIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPTADDV 126
Query: 227 EYASWLGQNQIPMTLVFTKCDK--RKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTS 284
+ +L +IP+ +V TK DK R K ++ LN F + +I+ S
Sbjct: 127 QMYEFLKYYKIPVIIVATKADKIPRGKWNKHESAIKKKLN---------FDPSDDFILFS 177
Query: 285 SVTNQGRDE 293
SVT G D+
Sbjct: 178 SVTKAGMDQ 186
>gi|394990187|ref|ZP_10383019.1| ribosome biogenesis GTP-binding protein YsxC [Sulfuricella
denitrificans skB26]
gi|393790452|dbj|GAB72658.1| ribosome biogenesis GTP-binding protein YsxC [Sulfuricella
denitrificans skB26]
Length = 208
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 84/147 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
+A+F S+ + D P E A GRSN GKSS +N+L R +LA SKTPG+TQ IN
Sbjct: 6 EAQFFISADKLTDLPPPSGIEIAFAGRSNSGKSSAINTLANRNRLAFVSKTPGRTQLINF 65
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + + +LVDLPGYGYA P +R W Y + R +L + L++DA P P+D
Sbjct: 66 FSLGNDRFLVDLPGYGYAKVPEAMRVHWQSVLSRYLMERESLYGLVLIMDARHPLTPLDH 125
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKK 253
+ +W P+ ++ TK DK K++
Sbjct: 126 QMLNWFIPTCKPVHVLLTKADKLSKQQ 152
>gi|146329655|ref|YP_001209308.1| GTPase [Dichelobacter nodosus VCS1703A]
gi|146233125|gb|ABQ14103.1| GTPase [Dichelobacter nodosus VCS1703A]
Length = 199
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 81/146 (55%), Gaps = 1/146 (0%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
QA F S P D + E A GRSN GKSS LN+L + LA SKTPG+TQ IN+
Sbjct: 7 QATFSCSVHAAHQLPKDAVVEVAFAGRSNAGKSSALNALTNQATLARVSKTPGRTQLINY 66
Query: 167 FRINDSW-YLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPID 225
F + D+ YLVDLPGYGYA P +R W+ DY L R L V L++D P KP+D
Sbjct: 67 FALPDAGKYLVDLPGYGYAQVPDAVRQHWEHLLGDYLLTRQALKGVVLIMDIRHPLKPLD 126
Query: 226 LEYASWLGQNQIPMTLVFTKCDKRKK 251
+ +P+ ++ TK DK K
Sbjct: 127 QQLLDCCQARALPVHVLLTKADKLSK 152
>gi|291548431|emb|CBL21539.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Ruminococcus sp.
SR1/5]
Length = 203
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 92/179 (51%), Gaps = 9/179 (5%)
Query: 117 TEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLV 176
T P G PE A G+SNVGKSSL+N L+ RK LA TS PGKTQ IN + IN++ YLV
Sbjct: 15 TSKIPDTGRPEVAFAGKSNVGKSSLINGLMNRKALARTSAQPGKTQTINFYNINEAMYLV 74
Query: 177 DLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQ 236
DLPGYGYA + W K + Y N L +VFLL+D D + W+ N
Sbjct: 75 DLPGYGYAKVSAAEKEKWGKMIEGYLHNSKELRAVFLLVDIRHKPSANDKQMYDWICHNG 134
Query: 237 IPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMT-SSVTNQGRDEI 294
++ TK DK K+ + +E+ G I+ S+ T QGRDEI
Sbjct: 135 YEPVIIATKLDKLKR--------SQVAKSLKEIRIGLGLPKEGKILPFSAETKQGRDEI 185
>gi|395230168|ref|ZP_10408474.1| GTPase EngB [Citrobacter sp. A1]
gi|424730868|ref|ZP_18159460.1| ribosome biogenesis gtp-binding protein [Citrobacter sp. L17]
gi|394716098|gb|EJF21867.1| GTPase EngB [Citrobacter sp. A1]
gi|422894581|gb|EKU34390.1| ribosome biogenesis gtp-binding protein [Citrobacter sp. L17]
Length = 210
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 82/142 (57%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
Q FV S+ PSD E A GRSN GKSS LN+L +K LA TSKTPG+TQ IN
Sbjct: 8 QTHFVMSAPDIRHLPSDAGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINL 67
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F + D LVDLPGYGYA P E++ W + +Y R +L + +L+D P K +D
Sbjct: 68 FEVVDGKRLVDLPGYGYAEVPEEMKRKWQRALAEYLEKRQSLQGLVVLMDIRHPLKDLDQ 127
Query: 227 EYASWLGQNQIPMTLVFTKCDK 248
+ W ++ + + ++ TK DK
Sbjct: 128 QMILWAVESNVQVLVLLTKADK 149
>gi|417854312|ref|ZP_12499627.1| GTP-binding protein YsxC [Pasteurella multocida subsp. multocida
str. Anand1_goat]
gi|338218209|gb|EGP03998.1| GTP-binding protein YsxC [Pasteurella multocida subsp. multocida
str. Anand1_goat]
Length = 205
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 80/139 (57%)
Query: 110 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI 169
F+ S+ P D E A GRSN GKS+ LN+L +K LA TSKTPG+TQ IN F +
Sbjct: 13 FLTSAPDIRALPEDSGIEIAFAGRSNAGKSTALNALTNQKSLARTSKTPGRTQLINLFEV 72
Query: 170 NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYA 229
LVDLPGYGYAA P +++ W K +Y R L V +L+D P K +D +
Sbjct: 73 EPQCRLVDLPGYGYAAVPEQMKIQWQKALGEYLQKRQCLAGVVILMDIRHPLKDLDQQMI 132
Query: 230 SWLGQNQIPMTLVFTKCDK 248
W +++P+ L+ TK DK
Sbjct: 133 EWAVASKLPVLLLLTKADK 151
>gi|322389612|ref|ZP_08063160.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
parasanguinis ATCC 903]
gi|321143611|gb|EFX39041.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
parasanguinis ATCC 903]
Length = 200
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 101/186 (54%), Gaps = 11/186 (5%)
Query: 107 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINH 166
A+ + S+ P D +PE AL GRSNVGKSS +N+L+ RK LA TS PGKTQ +N
Sbjct: 7 NADILLSAANKSHYPQDEIPEVALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNF 66
Query: 167 FRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 226
F I+D LVD+PGYGYA ++ R W + ++Y +R L +V L+D D+
Sbjct: 67 FNIDDKLRLVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLKAVVSLVDFRHEPSADDV 126
Query: 227 EYASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGF--FQTAPPWIMTS 284
+ +L +IP+ LV TK D K P N + +I+ F + +I+ S
Sbjct: 127 QMYEFLKYYEIPVILVATKAD---------KIPRGKWNKHESIIKKKLDFDPSDTFIVFS 177
Query: 285 SVTNQG 290
SVT +G
Sbjct: 178 SVTKEG 183
>gi|325981834|ref|YP_004294236.1| ribosome biogenesis GTP-binding protein YsxC [Nitrosomonas sp.
AL212]
gi|325531353|gb|ADZ26074.1| ribosome biogenesis GTP-binding protein YsxC [Nitrosomonas sp.
AL212]
Length = 198
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 96/188 (51%), Gaps = 6/188 (3%)
Query: 108 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF 167
A F S+ D P E A GRSN GKSS +N+L R +LA SKTPG+TQ IN F
Sbjct: 7 ATFYTSAHERRDLPKHSGIEIAFSGRSNAGKSSAINALTNRNRLAFVSKTPGRTQLINFF 66
Query: 168 RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 227
++ + +LVDLPGYGYA P +R W +Y R++L + L++D P KP D++
Sbjct: 67 QLASNQFLVDLPGYGYAKVPEHVRLHWKNLLSNYLQTRNSLRGLILVMDIRHPLKPQDIQ 126
Query: 228 YASWLGQNQIPMTLVFTKCDKRKKKKNGGKRPEENLNDFQELIQGFFQTAPPWIMTSSVT 287
W + ++ TK DK K++ L I+ F+ + SS+T
Sbjct: 127 MLDWFSSTGKVIHILLTKADKLSKQQ-----ANITLQKVALFIKEFYPQCSVQLF-SSIT 180
Query: 288 NQGRDEIL 295
N G D+ +
Sbjct: 181 NIGVDDAM 188
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,881,628,172
Number of Sequences: 23463169
Number of extensions: 199119333
Number of successful extensions: 678398
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3381
Number of HSP's successfully gapped in prelim test: 6568
Number of HSP's that attempted gapping in prelim test: 667380
Number of HSP's gapped (non-prelim): 13044
length of query: 308
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 166
effective length of database: 9,027,425,369
effective search space: 1498552611254
effective search space used: 1498552611254
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)