Query         021751
Match_columns 308
No_of_seqs    252 out of 599
Neff          4.2 
Searched_HMMs 46136
Date          Fri Mar 29 05:23:17 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021751.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021751hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PF03479 DUF296:  Domain of unk 100.0 3.2E-29 6.9E-34  207.9   9.5  115  111-226     1-118 (120)
  2 COG1661 Predicted DNA-binding   99.9 3.7E-25 7.9E-30  190.9  13.8  122  109-234     7-131 (141)
  3 PF02178 AT_hook:  AT hook moti  87.3    0.26 5.6E-06   27.3   0.6   13   84-96      1-13  (13)
  4 smart00384 AT_hook DNA binding  70.0       3 6.6E-05   27.2   1.5   15   84-98      1-15  (26)
  5 TIGR01252 acetolac_decarb alph  34.5 1.5E+02  0.0033   28.1   7.0   92  137-232   106-209 (232)
  6 PF02196 RBD:  Raf-like Ras-bin  32.7   2E+02  0.0044   22.0   6.3   43  111-155    10-54  (71)
  7 PF15344 FAM217:  FAM217 family  31.6      18 0.00038   34.5   0.3   11   11-21     52-62  (233)
  8 smart00455 RBD Raf-like Ras-bi  31.3   2E+02  0.0043   22.1   6.0   36  111-146     9-46  (70)
  9 cd01817 RGS12_RBD Ubiquitin do  27.7 1.8E+02  0.0039   23.2   5.3   43  113-155    11-55  (73)
 10 cd01760 RBD Ubiquitin-like dom  26.8 1.5E+02  0.0032   23.2   4.7   37  112-148    10-48  (72)
 11 PF03306 AAL_decarboxy:  Alpha-  25.7      96  0.0021   29.0   4.1  111  115-232    83-207 (220)
 12 PF14201 DUF4318:  Domain of un  20.6 1.5E+02  0.0033   23.5   3.7   22  120-141    16-37  (74)
 13 PF15382 DUF4609:  Domain of un  20.1      82  0.0018   24.8   2.0   30   85-114     2-32  (70)

No 1  
>PF03479 DUF296:  Domain of unknown function (DUF296);  InterPro: IPR005175 This putative conserved domain is found in proteins that contain AT-hook motifs IPR000637 from INTERPRO, suggesting a DNA-binding function for the proteins as a whole, however, the function of this domain is unknown. Overexpression of a protein containing this domain, Q9S7C9 from SWISSPROT, in Arabidopsis thaliana causes late flowering and modified leaf development []. ; PDB: 2DT4_A 2P6Y_A 3HWU_A 3HTN_A 2NMU_A 2H6L_A 2HX0_A.
Probab=99.96  E-value=3.2e-29  Score=207.91  Aligned_cols=115  Identities=37%  Similarity=0.484  Sum_probs=100.4

Q ss_pred             ccEEEEEecCCCcHHHHHHHHHHHcCCceEEEEeeceeeeEEEcCCC--CCCceEeeecceEEEEeeeeccCCCCCCCCC
Q 021751          111 LRTHVMEIADGCDIVESVATFARRRQRGVCILSGTGTVTNVTLRQPA--SPGAIVSLHGRFEILSLSGSFLPPPAPPAAS  188 (308)
Q Consensus       111 mr~hVIrL~~GeDIvesI~~Farr~~~a~~VLSgiGAVsnVTLr~~~--~~g~~~tleG~FEILSLsGnis~~~~~~~~~  188 (308)
                      ||+|++||++||||+++|++||+++++.+|++||+|+|++|+|++++  ..+.+.+++|+|||+||+|||+..+ .+++.
T Consensus         1 ~r~~~~rl~~Gedl~~~l~~~~~~~~i~~~~is~iGsl~~~~l~~~~~~~~~~~~~~~g~~Ei~sl~G~i~~~~-g~~~~   79 (120)
T PF03479_consen    1 GRVFVIRLDPGEDLLESLEAFAREHGIRSGVISGIGSLSNVTLGYYDPPSYYEPLEFEGPFEIISLSGTISPED-GKPFV   79 (120)
T ss_dssp             EEEEEEEEETTSBHHHHHHHHHHHHT-SSEEEEEEEEEEEEEEEEEETTTEEEEEEEESEEEEEEEEEEEEEET-TEEEE
T ss_pred             CcEEEEEECCCCHHHHHHHHHHHHCCCcEEEEEEEeEEeEEEEEEecccCCcceEEecccEEEEEeEEEEECCC-CCCcc
Confidence            68999999999999999999999999999999999999999999984  4578999999999999999999843 36789


Q ss_pred             eEEEEEeCCCCcEEceecc-cceeecCcEEEEEeeecCc
Q 021751          189 GLTIYLAGGQGQVVGGSVV-GTLMTSGPVVIMAASFSNA  226 (308)
Q Consensus       189 HLHIsLAg~dGqVvGGHV~-G~LIAAg~V~VVaasF~n~  226 (308)
                      ||||+|++.||+|+||||. |.++++.+|+|+..++.+.
T Consensus        80 HlHisl~~~~g~v~gGHl~~g~v~~t~Ev~i~~~~~~~~  118 (120)
T PF03479_consen   80 HLHISLADPDGQVFGGHLLEGTVFATAEVVITELSGINF  118 (120)
T ss_dssp             EEEEEEE-TTSEEEEEEEEEEEEEEEEEEEEEEETTEEE
T ss_pred             eEEEEEECCCCeEEeeEeCCCEEeEEEEEEEEEecCccc
Confidence            9999999999999999999 8887777777776554443


No 2  
>COG1661 Predicted DNA-binding protein with PD1-like DNA-binding motif [General function prediction only]
Probab=99.93  E-value=3.7e-25  Score=190.92  Aligned_cols=122  Identities=16%  Similarity=0.250  Sum_probs=112.9

Q ss_pred             CCccEEEEEecCCCcHHHHHHHHHHHcCCceEEEEeeceeeeEEEcCCCC---CCceEeeecceEEEEeeeeccCCCCCC
Q 021751          109 NALRTHVMEIADGCDIVESVATFARRRQRGVCILSGTGTVTNVTLRQPAS---PGAIVSLHGRFEILSLSGSFLPPPAPP  185 (308)
Q Consensus       109 ~~mr~hVIrL~~GeDIvesI~~Farr~~~a~~VLSgiGAVsnVTLr~~~~---~g~~~tleG~FEILSLsGnis~~~~~~  185 (308)
                      ..-|.|++||++|+|+++.|.+||+++++.+++++|+|+|++++|++++.   .|.+++++++||||||.|||+..+   
T Consensus         7 ~~gr~~~~Rld~G~d~~~~l~~~a~~~~i~aa~v~~iGal~~~~l~~~~~~~~~y~~~~~~e~~EvlSL~G~i~~~~---   83 (141)
T COG1661           7 SSGRVIALRLDPGEDLFSELEAFAEQEDIHAAVVTAIGALRDAKLRYFDPEEKEYETIPVNEPLEVLSLLGNIALDD---   83 (141)
T ss_pred             ccceEEEEEeCCCccHHHHHHHHHHhcCceEEEEEEeeeeeeeEEEEecCCCCceEEEecCCcEEEEEecceeecCC---
Confidence            34689999999999999999999999999999999999999999999974   489999999999999999999987   


Q ss_pred             CCCeEEEEEeCCCCcEEceecccceeecCcEEEEEeeecCcceeccCCc
Q 021751          186 AASGLTIYLAGGQGQVVGGSVVGTLMTSGPVVIMAASFSNAAYERLPLE  234 (308)
Q Consensus       186 ~~~HLHIsLAg~dGqVvGGHV~G~LIAAg~V~VVaasF~n~~yeRlP~e  234 (308)
                      |+.|||++|++++|.++||||++..+.. .+.|++..+....+.|.+++
T Consensus        84 p~~HlHa~l~~~~G~~~GGHL~~~~V~~-t~Ev~I~el~~~~~~R~~d~  131 (141)
T COG1661          84 PFVHLHAALGDENGITLGGHLLEGEVFP-TAEVFIRELPGELFRREFDP  131 (141)
T ss_pred             CcEEEEEEEecCCCcEEeeeecccEEeE-EEEEEEEEccccceeEecCC
Confidence            6999999999999999999999777765 67788889999999999887


No 3  
>PF02178 AT_hook:  AT hook motif;  InterPro: IPR017956 AT hooks are DNA-binding motifs with a preference for A/T rich regions. These motifs are found in a variety of proteins, including the high mobility group (HMG) proteins [], in DNA-binding proteins from plants [] and in hBRG1 protein, a central ATPase of the human switching/sucrose non-fermenting (SWI/SNF) remodeling complex [].  High mobility group (HMG) proteins are a family of relatively low molecular weight non-histone components in chromatin []. HMG-I and HMG-Y (HMGA) are proteins of about 100 amino acid residues which are produced by the alternative splicing of a single gene. HMG-I/Y proteins bind preferentially to the minor groove of AT-rich regions in double-stranded DNA in a non-sequence specific manner [, ]. It is suggested that these proteins could function in nucleosome phasing and in the 3' end processing of mRNA transcripts. They are also involved in the transcription regulation of genes containing, or in close proximity to, AT-rich regions. ; GO: 0003677 DNA binding; PDB: 2EZE_A 2EZD_A 2EZF_A 2EZG_A.
Probab=87.33  E-value=0.26  Score=27.27  Aligned_cols=13  Identities=46%  Similarity=0.851  Sum_probs=4.2

Q ss_pred             CCCCCCCCCCCCC
Q 021751           84 RRPRGRPAGSKNK   96 (308)
Q Consensus        84 rrpRGRPpGSknK   96 (308)
                      +|+||||+.+.+|
T Consensus         1 ~r~RGRP~k~~~~   13 (13)
T PF02178_consen    1 KRKRGRPRKNAKK   13 (13)
T ss_dssp             S--SS--TT----
T ss_pred             CCcCCCCccccCC
Confidence            5899999987654


No 4  
>smart00384 AT_hook DNA binding domain with preference for A/T rich regions. Small DNA-binding motif first described in the high mobility group non-histone chromosomal protein HMG-I(Y).
Probab=70.03  E-value=3  Score=27.18  Aligned_cols=15  Identities=33%  Similarity=0.687  Sum_probs=11.9

Q ss_pred             CCCCCCCCCCCCCCC
Q 021751           84 RRPRGRPAGSKNKPK   98 (308)
Q Consensus        84 rrpRGRPpGSknKpk   98 (308)
                      +|+||||+..++...
T Consensus         1 kRkRGRPrK~~~~~~   15 (26)
T smart00384        1 KRKRGRPRKAPKDXX   15 (26)
T ss_pred             CCCCCCCCCCCCccc
Confidence            589999998877554


No 5  
>TIGR01252 acetolac_decarb alpha-acetolactate decarboxylase. Puruvate can be fermented to 2,3-butanediol. It is first converted to alpha-acetolactate by alpha-acetolactate synthase, then decarboxylated to acetoin by this enzyme. Acetoin can be reduced in some species to 2,3-butanediol by acetoin reductase.
Probab=34.47  E-value=1.5e+02  Score=28.08  Aligned_cols=92  Identities=18%  Similarity=0.306  Sum_probs=52.8

Q ss_pred             CceEEEEeeceeeeEEEcCCCC---CCce----EeeecceEEEEeeeecc----CCCC-CCCCCeEEEEEeCCCCcEEce
Q 021751          137 RGVCILSGTGTVTNVTLRQPAS---PGAI----VSLHGRFEILSLSGSFL----PPPA-PPAASGLTIYLAGGQGQVVGG  204 (308)
Q Consensus       137 ~a~~VLSgiGAVsnVTLr~~~~---~g~~----~tleG~FEILSLsGnis----~~~~-~~~~~HLHIsLAg~dGqVvGG  204 (308)
                      -..+-+---|..+.|+.|-.-.   +|..    +.=.-.||+-.++||+.    |.-- +-...++|+-+-+. -+.+||
T Consensus       106 N~f~Airi~G~F~~v~~Rsvp~Q~kPy~~l~e~~~~Q~~f~~~nv~GTlvGF~sP~~~~gi~v~G~HlHFisd-Dr~~GG  184 (232)
T TIGR01252       106 NVFYAIRITGEFPKVQTRTVPKQEKPYPPFVEVVKGQPEFHFDNVTGTIVGFWTPAYAKGINVAGYHLHFISE-DRTFGG  184 (232)
T ss_pred             ccEEEEEEEEEeceeEEEecCCCCCCCcCHHHHhcCCceEEEeccEEEEEEEecchhccccCCceEEEEEecC-CCCCCc
Confidence            4677888889999999996532   2422    12233488888888875    3210 11123444444433 356799


Q ss_pred             ecccceeecCcEEEEEeeecCcceeccC
Q 021751          205 SVVGTLMTSGPVVIMAASFSNAAYERLP  232 (308)
Q Consensus       205 HV~G~LIAAg~V~VVaasF~n~~yeRlP  232 (308)
                      ||....+....|  -+..+.+... +||
T Consensus       185 HVld~~~~~~~~--~i~~~~~~~~-~lP  209 (232)
T TIGR01252       185 HVLDYIIDNGTL--EIGQIQEFNL-QLP  209 (232)
T ss_pred             ceeEEEeeeeEE--EEeecccEEE-eCC
Confidence            999877754444  4444443332 455


No 6  
>PF02196 RBD:  Raf-like Ras-binding domain;  InterPro: IPR003116 This is the Ras-binding domain found in proteins related to Ras. It is found in association with the PE-bind and pkinase domains.; GO: 0005057 receptor signaling protein activity, 0007165 signal transduction; PDB: 1RFA_A 1C1Y_B 3KUD_B 1GUA_B 3KUC_B 2L05_A 3NY5_D 1RRB_A 1WFY_A 1WXM_A.
Probab=32.73  E-value=2e+02  Score=21.99  Aligned_cols=43  Identities=16%  Similarity=0.277  Sum_probs=32.7

Q ss_pred             ccEEEEEecCCCcHHHHHHHHHHHcCC--ceEEEEeeceeeeEEEcC
Q 021751          111 LRTHVMEIADGCDIVESVATFARRRQR--GVCILSGTGTVTNVTLRQ  155 (308)
Q Consensus       111 mr~hVIrL~~GeDIvesI~~Farr~~~--a~~VLSgiGAVsnVTLr~  155 (308)
                      -+.-++.+.+|+-|.+.|...|++++.  ..|.+-=+|  .+-.|-+
T Consensus        10 ~q~t~V~vrpg~ti~d~L~~~~~kr~L~~~~~~V~~~~--~~k~l~~   54 (71)
T PF02196_consen   10 GQRTVVQVRPGMTIRDALSKACKKRGLNPECCDVRLVG--EKKPLDW   54 (71)
T ss_dssp             TEEEEEEE-TTSBHHHHHHHHHHTTT--CCCEEEEEEE--EEEEE-T
T ss_pred             CCEEEEEEcCCCCHHHHHHHHHHHcCCCHHHEEEEEcC--CCccccC
Confidence            356789999999999999999999994  677777777  5555544


No 7  
>PF15344 FAM217:  FAM217 family
Probab=31.62  E-value=18  Score=34.55  Aligned_cols=11  Identities=55%  Similarity=1.295  Sum_probs=10.4

Q ss_pred             CCCCCCCCccc
Q 021751           11 LPPPFHTRDFQ   21 (308)
Q Consensus        11 ~~~~~~~~~~~   21 (308)
                      |||||+|=|+|
T Consensus        52 LPPPFNSwDL~   62 (233)
T PF15344_consen   52 LPPPFNSWDLH   62 (233)
T ss_pred             CCCCCcchhHH
Confidence            89999999987


No 8  
>smart00455 RBD Raf-like Ras-binding domain.
Probab=31.26  E-value=2e+02  Score=22.08  Aligned_cols=36  Identities=17%  Similarity=0.370  Sum_probs=30.4

Q ss_pred             ccEEEEEecCCCcHHHHHHHHHHHcCC--ceEEEEeec
Q 021751          111 LRTHVMEIADGCDIVESVATFARRRQR--GVCILSGTG  146 (308)
Q Consensus       111 mr~hVIrL~~GeDIvesI~~Farr~~~--a~~VLSgiG  146 (308)
                      -+...+.+.+|.-|.+.|+..|++++.  ..|.+.-.|
T Consensus         9 ~~~~~V~vrpg~tl~e~L~~~~~kr~l~~~~~~v~~~g   46 (70)
T smart00455        9 NQRTVVKVRPGKTVRDALAKALKKRGLNPECCVVRLRG   46 (70)
T ss_pred             CCEEEEEECCCCCHHHHHHHHHHHcCCCHHHEEEEEcC
Confidence            367889999999999999999999995  566666666


No 9  
>cd01817 RGS12_RBD Ubiquitin domain of RGS12 and RGS14. RGS12 (regulator of G signalling 12), and RGS14, are members of a family of GTPase-activating proteins (GAP's) specific for the G-alpha subunit, which act as key inhibitors of G-protein-mediated cell responses in eukaryotes.  Their domain architecture includes tandem RBD domains as well as  PDZ , PTB, and RGS, and GoLoco domains.
Probab=27.68  E-value=1.8e+02  Score=23.17  Aligned_cols=43  Identities=21%  Similarity=0.186  Sum_probs=31.5

Q ss_pred             EEEEEecCCCcHHHHHHHHHHHcCC--ceEEEEeeceeeeEEEcC
Q 021751          113 THVMEIADGCDIVESVATFARRRQR--GVCILSGTGTVTNVTLRQ  155 (308)
Q Consensus       113 ~hVIrL~~GeDIvesI~~Farr~~~--a~~VLSgiGAVsnVTLr~  155 (308)
                      .=++.+.+|+-|.+.|+..|++++.  ..|.+--.|.=.-+.+.+
T Consensus        11 ~T~V~vrpG~ti~d~L~kllekRgl~~~~~~vf~~g~~k~l~~~q   55 (73)
T cd01817          11 TTVVPTRPGESIRDLLSGLCEKRGINYAAVDLFLVGGDKPLVLDQ   55 (73)
T ss_pred             eEEEEecCCCCHHHHHHHHHHHcCCChhHEEEEEecCCcccccCC
Confidence            4578999999999999999999995  556555555444343433


No 10 
>cd01760 RBD Ubiquitin-like domain of RBD-like S/T kinases. The ras-binding domain (RBD) of the serine/threonine kinase raf is structurally quite similar to the beta-grasp fold of ubiquitin. A raf-like RBD is also present in RGS12 and other members of a family of GTPase activating proteins and TIAM1, a guanine nucleotide exchange protein.
Probab=26.84  E-value=1.5e+02  Score=23.17  Aligned_cols=37  Identities=16%  Similarity=0.257  Sum_probs=29.9

Q ss_pred             cEEEEEecCCCcHHHHHHHHHHHcCC--ceEEEEeecee
Q 021751          112 RTHVMEIADGCDIVESVATFARRRQR--GVCILSGTGTV  148 (308)
Q Consensus       112 r~hVIrL~~GeDIvesI~~Farr~~~--a~~VLSgiGAV  148 (308)
                      +.-++.+.+|+-|.+.|+..|++++.  ..|.|--.|.-
T Consensus        10 ~~t~V~vrpg~ti~d~L~~~c~kr~l~~~~~~v~~~~~~   48 (72)
T cd01760          10 QRTVVPVRPGMSVRDVLAKACKKRGLNPECCDVFLLGLD   48 (72)
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHcCCCHHHEEEEEecCC
Confidence            56789999999999999999999995  55665555543


No 11 
>PF03306 AAL_decarboxy:  Alpha-acetolactate decarboxylase;  InterPro: IPR005128 Alpha-acetolactate decarboxylase plays a dual role in the cell: (i) it catalyzes the second step of the acetoin pathway,  (S)-2-hydroxy-2-methyl-3-oxobutanoate = (R)-2-acetoin + CO2  and thus potentially the internal pH of cells and (ii) it controls the pool of alpha-acetolactate during leucine and valine synthesis.; GO: 0047605 acetolactate decarboxylase activity, 0019751 polyol metabolic process, 0005789 endoplasmic reticulum membrane; PDB: 1XV2_B.
Probab=25.75  E-value=96  Score=29.04  Aligned_cols=111  Identities=15%  Similarity=0.242  Sum_probs=57.2

Q ss_pred             EEEecCCCcHHHHHHHHHHHcCCceEEEEeeceeeeEEEcCCCC---CCc----eEeeecceEEEEeeeecc----CCC-
Q 021751          115 VMEIADGCDIVESVATFARRRQRGVCILSGTGTVTNVTLRQPAS---PGA----IVSLHGRFEILSLSGSFL----PPP-  182 (308)
Q Consensus       115 VIrL~~GeDIvesI~~Farr~~~a~~VLSgiGAVsnVTLr~~~~---~g~----~~tleG~FEILSLsGnis----~~~-  182 (308)
                      +.....-++|.+.|.+.....+ ....+---|..+.|++|-...   +|.    ++.-+-.||.-.++||+.    |.- 
T Consensus        83 ~~~~~~~~~l~~~l~~~~~~~N-~f~airi~G~F~~v~~Rsv~~qe~Py~~l~e~~~~Q~~f~~~ni~GTlVGf~sP~~~  161 (220)
T PF03306_consen   83 LDSPMSKEELEAKLDELLPSKN-LFYAIRIDGTFSSVKTRSVPKQEKPYPPLAEVAKNQPEFTFENIEGTLVGFYSPEYM  161 (220)
T ss_dssp             -EEEEEHHHHHHHHHHHSS-TT-S-EEEEEEEEEEEEEEE------SS---THHHHTT--EEEEEEEEEEEEEEEE-GGG
T ss_pred             cCCCCCHHHHHHHHHHhcCCCc-eEEEEEEEEEECeEEEEeccCccCCCCChhHHhccCceEEecCcEEEEEEEEcchhc
Confidence            3444556777777777766444 356667799999999996533   232    111233477777777775    321 


Q ss_pred             -C-CCCCCeEEEEEeCCCCcEEceecccceeecCcEEEEEeeecCcceeccC
Q 021751          183 -A-PPAASGLTIYLAGGQGQVVGGSVVGTLMTSGPVVIMAASFSNAAYERLP  232 (308)
Q Consensus       183 -~-~~~~~HLHIsLAg~dGqVvGGHV~G~LIAAg~V~VVaasF~n~~yeRlP  232 (308)
                       + .-+.-|||..=.   -+.+||||....+....|.  +..+.+... ++|
T Consensus       162 ~gi~v~G~HlHFls~---Dr~~GGHvld~~~~~~~v~--~~~~~~~~l-~lP  207 (220)
T PF03306_consen  162 GGINVPGFHLHFLSD---DRTFGGHVLDFELDNGTVE--IDVFDDFEL-ELP  207 (220)
T ss_dssp             BTTB-CEEEEEEEET---TSS-EEEEEEEEEEEEEEE--EEE-SEEEE-E--
T ss_pred             cccCCceEEEEEecC---CCCCCCCeEEEEeceEEEE--EEecCCEEE-ECc
Confidence             1 122346665432   4568999997766554443  334443332 455


No 12 
>PF14201 DUF4318:  Domain of unknown function (DUF4318)
Probab=20.57  E-value=1.5e+02  Score=23.51  Aligned_cols=22  Identities=9%  Similarity=0.256  Sum_probs=17.9

Q ss_pred             CCCcHHHHHHHHHHHcCCceEE
Q 021751          120 DGCDIVESVATFARRRQRGVCI  141 (308)
Q Consensus       120 ~GeDIvesI~~Farr~~~a~~V  141 (308)
                      .-++|.++|..||.+++..+-.
T Consensus        16 s~e~i~~aIE~YC~~~~~~l~F   37 (74)
T PF14201_consen   16 SKEEICEAIEKYCIKNGESLEF   37 (74)
T ss_pred             CHHHHHHHHHHHHHHcCCceEE
Confidence            4578999999999998876544


No 13 
>PF15382 DUF4609:  Domain of unknown function (DUF4609)
Probab=20.12  E-value=82  Score=24.84  Aligned_cols=30  Identities=40%  Similarity=0.482  Sum_probs=20.1

Q ss_pred             CCCCCCCCCCCCCCCC-eeeeeCCCCCccEE
Q 021751           85 RPRGRPAGSKNKPKPP-IIITRDSANALRTH  114 (308)
Q Consensus        85 rpRGRPpGSknKpk~p-~~it~~s~~~mr~h  114 (308)
                      +|-.+-..||+|-..| |||||.+-..+..+
T Consensus         2 kpd~kqksskkk~viPqIiITraS~ETL~S~   32 (70)
T PF15382_consen    2 KPDVKQKSSKKKVVIPQIIITRASNETLISY   32 (70)
T ss_pred             CcchhhhccccccccceEEEEecCccceeec
Confidence            3444556678887755 88999887665554


Done!