Query         021751
Match_columns 308
No_of_seqs    252 out of 599
Neff          4.2 
Searched_HMMs 29240
Date          Mon Mar 25 08:46:21 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021751.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021751hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2hx0_A Putative DNA-binding pr 100.0 1.2E-28   4E-33  211.8  15.4  127  103-236    10-138 (154)
  2 2p6y_A Hypothetical protein VC 100.0 3.2E-28 1.1E-32  206.3  16.2  120  110-236     1-122 (142)
  3 2dt4_A Hypothetical protein PH 100.0 4.7E-29 1.6E-33  211.0  11.0  120  112-235    10-132 (143)
  4 2h6l_A Hypothetical protein; N 100.0 6.3E-29 2.2E-33  210.9  10.5  122  111-236     9-133 (146)
  5 3htn_A Putative DNA binding pr 100.0 2.8E-28 9.7E-33  208.4  11.3  121  112-235    16-139 (149)
  6 3hwu_A Putative DNA-binding pr  99.9 3.3E-26 1.1E-30  195.0  11.4  121  112-235    13-136 (147)
  7 2ezd_A High mobility group pro  97.4 8.2E-05 2.8E-09   46.8   2.2   18   81-98      2-19  (26)
  8 2k9i_A Plasmid PRN1, complete   37.6      27 0.00091   23.3   3.0   24  115-138    11-34  (55)
  9 4i95_A Putative uncharacterize  32.0      29   0.001   29.6   2.9   41  138-180    37-84  (142)
 10 1t3g_A X-linked interleukin-1   25.3      41  0.0014   27.9   2.7   27  118-144    51-77  (159)

No 1  
>2hx0_A Putative DNA-binding protein; NESG, PSI-2, SCR59, structural genomics, protein structure initiative; 1.55A {Salmonella choleraesuis} SCOP: d.290.1.3 PDB: 2nmu_A
Probab=99.96  E-value=1.2e-28  Score=211.81  Aligned_cols=127  Identities=20%  Similarity=0.394  Sum_probs=111.9

Q ss_pred             eeeCCCCCccEEEEEecCCCcHHHHHHHHHHHcCC-ceEEEEeeceeeeEEEcCCCCCCceEeeecceEEEEeeeeccCC
Q 021751          103 ITRDSANALRTHVMEIADGCDIVESVATFARRRQR-GVCILSGTGTVTNVTLRQPASPGAIVSLHGRFEILSLSGSFLPP  181 (308)
Q Consensus       103 it~~s~~~mr~hVIrL~~GeDIvesI~~Farr~~~-a~~VLSgiGAVsnVTLr~~~~~g~~~tleG~FEILSLsGnis~~  181 (308)
                      ++.++++.+|+|++||++||||+++|++||+++++ ++||++++|+|++|+||+++... +++++|+|||+||+|||++.
T Consensus        10 ~~~~~~~~~r~~vlrL~~Gedl~~~i~~~~~~~gi~~a~v~s~iGsl~~~~l~~~~~~~-~~~~~g~~EIlsl~Gti~~~   88 (154)
T 2hx0_A           10 VSHHNASTARFYALRLLPGQEVFSQLHAFVQQNQLRAAWIAGCTGSLTDVALRYAGQEA-TTSLTGTFEVISLNGTLELT   88 (154)
T ss_dssp             --CCSCCCCEEEEEEECTTCBHHHHHHHHHHHHTCSSEEEEEEEEEEEEEEEECTTCSS-CEEEEEEEEEEEEEEEEETT
T ss_pred             eccCCCCCccEEEEEECCCCcHHHHHHHHHHHhCCCEEEEEEeEeeeEEeEEEccCCCc-cEecCCcEEEEEeeeeEeCC
Confidence            34578899999999999999999999999999997 67888999999999999997654 78899999999999999985


Q ss_pred             CCCCCCCeEEEEEeCCCCcEEceeccc-ceeecCcEEEEEeeecCcceeccCCccc
Q 021751          182 PAPPAASGLTIYLAGGQGQVVGGSVVG-TLMTSGPVVIMAASFSNAAYERLPLEEE  236 (308)
Q Consensus       182 ~~~~~~~HLHIsLAg~dGqVvGGHV~G-~LIAAg~V~VVaasF~n~~yeRlP~e~~  236 (308)
                           ..||||+|++.||+|+||||++ .+|. .++.|++.+|.+..|+|++|++-
T Consensus        89 -----~~HlHisl~~~~G~v~GGHL~~g~~V~-~t~Ev~i~~~~~~~~~R~~D~eT  138 (154)
T 2hx0_A           89 -----GEHLHLAVSDPYGVMLGGHMMPGCTVR-TTLELVIGELPALTFSRQPCAIS  138 (154)
T ss_dssp             -----EEEEEEEEECTTSCEEEEEECTTCEEE-EEEEEEEEECTTEEEEEEECTTT
T ss_pred             -----CCEEEEEEECCCCCEEccccCCCCcEE-EEEEEEEEEccCceEEEecCCCC
Confidence                 4999999999999999999996 5665 45667778999999999998763


No 2  
>2p6y_A Hypothetical protein VCA0587; NESG, Q9KM02_vibch, VCR80, structural genomics, PSI-2, prote structure initiative; 1.63A {Vibrio cholerae}
Probab=99.96  E-value=3.2e-28  Score=206.35  Aligned_cols=120  Identities=22%  Similarity=0.363  Sum_probs=106.9

Q ss_pred             CccEEEEEecCCCcHHHHHHHHHHHcCC-ceEEEEeeceeeeEEEcCCCCCCceEeeecceEEEEeeeeccCCCCCCCCC
Q 021751          110 ALRTHVMEIADGCDIVESVATFARRRQR-GVCILSGTGTVTNVTLRQPASPGAIVSLHGRFEILSLSGSFLPPPAPPAAS  188 (308)
Q Consensus       110 ~mr~hVIrL~~GeDIvesI~~Farr~~~-a~~VLSgiGAVsnVTLr~~~~~g~~~tleG~FEILSLsGnis~~~~~~~~~  188 (308)
                      .||+|++||++||||+++|++||+++++ ++||++|+|+|++|+||+++... +++++|+|||+||+|||++.     ..
T Consensus         1 ~~r~~~lrL~~Gedl~~~i~~~~~~~~i~~a~v~~~iGsl~~~~l~~~~~~~-~~~~~g~~EIlsl~Gti~~~-----~~   74 (142)
T 2p6y_A            1 MIHLIALRLTRGMDLKQQIVQLVQQHRIHAGSIASCVGCLSTLHIRLADSVS-TLQVSAPFEILSLSGTLTYQ-----HC   74 (142)
T ss_dssp             CCEEEEEEECTTCBHHHHHHHHHHHTTCSSEEEEEEEEEEEEEEEECTTSSC-EEEECSCEEEEEEEEEECSS-----CE
T ss_pred             CCcEEEEEECCCCcHHHHHHHHHHHhCCCEEEEEEeEEEEEeEEEECCCCCc-cEecCCcEEEEEeEEEEeCC-----CC
Confidence            3899999999999999999999999997 67888999999999999997644 68899999999999999985     59


Q ss_pred             eEEEEEeCCCCcEEceeccc-ceeecCcEEEEEeeecCcceeccCCccc
Q 021751          189 GLTIYLAGGQGQVVGGSVVG-TLMTSGPVVIMAASFSNAAYERLPLEEE  236 (308)
Q Consensus       189 HLHIsLAg~dGqVvGGHV~G-~LIAAg~V~VVaasF~n~~yeRlP~e~~  236 (308)
                      ||||+++|.||+|+||||++ .+|. .++.|++.+|.+..|+|+||++-
T Consensus        75 HlHisl~~~~G~v~GGHl~~g~~V~-~t~Ev~i~~~~~~~~~R~~D~eT  122 (142)
T 2p6y_A           75 HLHIAVADAQGRVWGGHLLEGNLIN-TTAELMIHHYPQHHFTREFDPNT  122 (142)
T ss_dssp             EEEEEEECTTSCEEEEEECTTCEEC-C-EEEEEEECTTEEEEEEEETTT
T ss_pred             EEEEEEECCCCCEEccccCCCCeEE-EEEEEEEEEccCCeEEEeeCCCC
Confidence            99999999999999999986 5664 56667778999999999998763


No 3  
>2dt4_A Hypothetical protein PH0802; PPC domain, structural genomics, unknown function; 1.60A {Pyrococcus horikoshii}
Probab=99.96  E-value=4.7e-29  Score=210.98  Aligned_cols=120  Identities=21%  Similarity=0.366  Sum_probs=107.5

Q ss_pred             cEEEEEecCCCcHHHHHHHHHHHcCCceEEEEeeceeeeEEEcCCCCC---CceEeeecceEEEEeeeeccCCCCCCCCC
Q 021751          112 RTHVMEIADGCDIVESVATFARRRQRGVCILSGTGTVTNVTLRQPASP---GAIVSLHGRFEILSLSGSFLPPPAPPAAS  188 (308)
Q Consensus       112 r~hVIrL~~GeDIvesI~~Farr~~~a~~VLSgiGAVsnVTLr~~~~~---g~~~tleG~FEILSLsGnis~~~~~~~~~  188 (308)
                      |+|++||++||||+++|++||+++++.+|+++++|+|++|+||+++..   |..++++|+|||+||+|||++.++ +++.
T Consensus        10 r~~~lrl~~Gedl~~~i~~~~~~~~i~~a~vs~iGsl~~~~l~~~~~~~~~~~~~~~~g~~EIlsl~Gti~~~~g-~p~~   88 (143)
T 2dt4_A           10 RTYLFRVPEGEELLTYIKNFCKKEGIETAIINGIGTLKNPKIGYFLEEKKEYKVIPLKGSYELISLIGNVSLKDG-EPFV   88 (143)
T ss_dssp             EEEEEEECTTCBHHHHHHHHHHHHTCCSEEEEEEEEEEEEEEEEEETTTTEEEEEECCSEEEEEEEEEEEEEETT-EEEE
T ss_pred             CEEEEEECCCCcHHHHHHHHHHHcCCCEEEEEEEEEEEEEEEEeecCccCcceeEeecCCEEEEEeEEEEECCCC-Ccee
Confidence            799999999999999999999999998888899999999999998754   567999999999999999999765 5689


Q ss_pred             eEEEEEeCCCCcEEceecccceeecCcEEEEEeeecCcceeccCCcc
Q 021751          189 GLTIYLAGGQGQVVGGSVVGTLMTSGPVVIMAASFSNAAYERLPLEE  235 (308)
Q Consensus       189 HLHIsLAg~dGqVvGGHV~G~LIAAg~V~VVaasF~n~~yeRlP~e~  235 (308)
                      ||||+|+|.||+|+||||+...++  +..|++.+|.+..|+|+| ++
T Consensus        89 HlHi~l~~~~G~v~GGHl~~g~v~--t~Ev~i~~~~~~~~~R~~-~e  132 (143)
T 2dt4_A           89 HAHVSLGNEEGIVFGGHLVEGEVF--VAEIFLQELKGEKIERKP-TK  132 (143)
T ss_dssp             EEEEEEECTTSCEEEEEEEEEEEE--EEEEEEEEEEESCCEEBC-CT
T ss_pred             eEEEEEECCCCCEeCCCCCCCceE--EEEEEEEEcCCCeEEEeC-CC
Confidence            999999999999999999966554  445677899999999999 54


No 4  
>2h6l_A Hypothetical protein; NESG GR103, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.00A {Archaeoglobus fulgidus} SCOP: d.290.1.3
Probab=99.96  E-value=6.3e-29  Score=210.86  Aligned_cols=122  Identities=20%  Similarity=0.250  Sum_probs=109.9

Q ss_pred             ccEEEEEecCCCcHHHHHHHHHHHcCCceEEEEeeceeeeEEEcCCCCC---CceEeeecceEEEEeeeeccCCCCCCCC
Q 021751          111 LRTHVMEIADGCDIVESVATFARRRQRGVCILSGTGTVTNVTLRQPASP---GAIVSLHGRFEILSLSGSFLPPPAPPAA  187 (308)
Q Consensus       111 mr~hVIrL~~GeDIvesI~~Farr~~~a~~VLSgiGAVsnVTLr~~~~~---g~~~tleG~FEILSLsGnis~~~~~~~~  187 (308)
                      -|+|++||++||||+++|++||+++++.+|+++|+|+|++|+|++++..   |.+++++|+|||+||+|||++.++ +++
T Consensus         9 gr~~~lrl~~Gedl~~~i~~~~~~~~i~~a~vs~iGsl~~~~l~~~~~~~~~y~~~~~~g~~EIlsl~Gti~~~dg-~p~   87 (146)
T 2h6l_A            9 GKGFLLRLDYGKDLVRQIEEFLEEKGIHAAHISAIGAVRSAVIGYYDQEKKEYVKKELMEPLEILSLSGNVSMKDS-KPF   87 (146)
T ss_dssp             CEEEEEECCTTSBHHHHHHHHHHHHTCCSEEEEEEEEEEEEEEEEEETTTTEEEEEEECSCEEEEEEEEEEEEETT-EEE
T ss_pred             CCEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEEEEEEEEEEEECCCCCCcceeEEEecCcEEEEEeEEEEECCCC-Cce
Confidence            3699999999999999999999999988777799999999999999764   468999999999999999999765 568


Q ss_pred             CeEEEEEeCCCCcEEceecccceeecCcEEEEEeeecCcceeccCCccc
Q 021751          188 SGLTIYLAGGQGQVVGGSVVGTLMTSGPVVIMAASFSNAAYERLPLEEE  236 (308)
Q Consensus       188 ~HLHIsLAg~dGqVvGGHV~G~LIAAg~V~VVaasF~n~~yeRlP~e~~  236 (308)
                      .||||+|+ .||+|+||||++.+|  .++.|++.+|.+..|+|+||++-
T Consensus        88 ~HlHi~l~-~~G~v~gGHl~~g~V--~t~Evvi~~~~~~~~~R~~D~et  133 (146)
T 2h6l_A           88 CHIHVLLG-KDGEVYGGHLFSAEV--FACEVFVLPLSGEAPERAFDEQT  133 (146)
T ss_dssp             EEEEEEEE-EBTEEEEEEEEEEEE--EEEEEEEEECBSCCCBEEECTTT
T ss_pred             eeEEEEEC-CCCcEEeeecCCCEE--EEEEEEEEEcCCCcEEEeECCCC
Confidence            99999999 999999999997776  46778889999999999998763


No 5  
>3htn_A Putative DNA binding protein; DUF269 family protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE 1PE; 1.50A {Bacteroides thetaiotaomicron vpi-5482} SCOP: d.290.1.0
Probab=99.95  E-value=2.8e-28  Score=208.40  Aligned_cols=121  Identities=15%  Similarity=0.222  Sum_probs=107.1

Q ss_pred             cEEEEEecCCCcHHHHHHHHHHHcCCceEEEEeeceeeeEEEcCCCCC---CceEeeecceEEEEeeeeccCCCCCCCCC
Q 021751          112 RTHVMEIADGCDIVESVATFARRRQRGVCILSGTGTVTNVTLRQPASP---GAIVSLHGRFEILSLSGSFLPPPAPPAAS  188 (308)
Q Consensus       112 r~hVIrL~~GeDIvesI~~Farr~~~a~~VLSgiGAVsnVTLr~~~~~---g~~~tleG~FEILSLsGnis~~~~~~~~~  188 (308)
                      |.|++||++||||+++|++||+++++.+|+++|+|+|++|+|++++..   |..++++|+|||+||+|||++.++ +++.
T Consensus        16 r~~~lrl~~Gedl~~~l~~~~~~~~i~~a~vs~iGsl~~~~l~~~~~~~~~y~~~~~~g~~EI~sl~Gti~~~dG-~p~~   94 (149)
T 3htn_A           16 NKYIVSINNHTEIVKALNAFCKEKGILSGSINGIGAIGELTLRFFNPKTKAYDDKTFREQMEISNLTGNISSMNE-QVYL   94 (149)
T ss_dssp             TEEEEEECTTCBHHHHHHHHHHHHTCCSEEEEEEEEEEEEEEEEECTTTCCEEEEEECSCEEEEEEEEEEEEETT-EEEE
T ss_pred             CEEEEEECCCChHHHHHHHHHHHcCCcEEEEEEEEEeeeEEEEccCCCcccceeEEecCceEEEEeEEEEEccCC-CceE
Confidence            899999999999999999999999998888899999999999998653   568899999999999999999765 5789


Q ss_pred             eEEEEEeCCCCcEEceecccceeecCcEEEEEeeecCcceeccCCcc
Q 021751          189 GLTIYLAGGQGQVVGGSVVGTLMTSGPVVIMAASFSNAAYERLPLEE  235 (308)
Q Consensus       189 HLHIsLAg~dGqVvGGHV~G~LIAAg~V~VVaasF~n~~yeRlP~e~  235 (308)
                      |||++|++.+|+|+||||+...|.. +..|++..+.. .++|.+|++
T Consensus        95 HlH~sl~~~~G~v~gGHl~~g~V~~-t~Ei~i~~~~~-~~~R~~D~~  139 (149)
T 3htn_A           95 HLHITVGRSDYSALAGHLLSAIQNG-AGEFVVEDYSE-RISRTYNPD  139 (149)
T ss_dssp             EEEEEEECTTSBEEEEEEEEEEEEE-EEEEEEEECCS-CCEEEEETT
T ss_pred             EEEEEEECCCCCEEeEEeCCCEEEE-EEEEEEEEcCC-eeEEeeCCc
Confidence            9999999999999999999776643 34456667777 899998875


No 6  
>3hwu_A Putative DNA-binding protein; YP_299413.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.30A {Ralstonia eutropha}
Probab=99.93  E-value=3.3e-26  Score=194.99  Aligned_cols=121  Identities=16%  Similarity=0.200  Sum_probs=105.2

Q ss_pred             cEEEEEecCCCcHHHHHHHHHHHcCCceEEEEeeceeeeEEEcCCCCC---CceEeeecceEEEEeeeeccCCCCCCCCC
Q 021751          112 RTHVMEIADGCDIVESVATFARRRQRGVCILSGTGTVTNVTLRQPASP---GAIVSLHGRFEILSLSGSFLPPPAPPAAS  188 (308)
Q Consensus       112 r~hVIrL~~GeDIvesI~~Farr~~~a~~VLSgiGAVsnVTLr~~~~~---g~~~tleG~FEILSLsGnis~~~~~~~~~  188 (308)
                      |.+++||++|+||+++|.+||+++++..++++++|++++|+|++++..   |...+++ ++||+||+|||++.++ .++.
T Consensus        13 ~~~~~rL~~Gedl~~~l~~~~~~~~i~~a~v~~iGsl~~~~l~~~~~~~~~y~~~~~~-~~Ei~sl~Gtis~~dG-~p~~   90 (147)
T 3hwu_A           13 TGYLMVLRHGDNVLQNLEQLARDEHIPSASFVGIGFMSEATFGFYDFGRKQFDPKTYR-NVEMANMTGSIAWKEG-KPSI   90 (147)
T ss_dssp             TEEEEEEETTCBHHHHHHHHHHHTTCSEEEEEEEEEEEEEEEEEEETTTTEEEEEEEE-EEEEEEEEEEEEEETT-EEEE
T ss_pred             CEEEEEECCCChHHHHHHHHHHHcCCCEEEEEEEecccEEEEEeecCCcCccccEEec-CcEEEEEEEEEEcCCC-CceE
Confidence            789999999999999999999999999999999999999999998753   5667888 8999999999998765 6799


Q ss_pred             eEEEEEeCCCCcEEceecccceeecCcEEEEEeeecCcceeccCCcc
Q 021751          189 GLTIYLAGGQGQVVGGSVVGTLMTSGPVVIMAASFSNAAYERLPLEE  235 (308)
Q Consensus       189 HLHIsLAg~dGqVvGGHV~G~LIAAg~V~VVaasF~n~~yeRlP~e~  235 (308)
                      |||++++|.+|+|+||||+...|..+++.|++..+. ..++|.+|++
T Consensus        91 HlH~~~~d~~g~v~GGHL~~g~V~~~t~Ei~i~~~~-~~~~R~~D~~  136 (147)
T 3hwu_A           91 HAHGTVTDGTFQGAGGHLLGLTVGTGSCEITVTVYP-QRLDRFVDPE  136 (147)
T ss_dssp             EEEEEEECTTCCEEEEEEEEEEEEEEEEEEEEEEES-SCCBEEEETT
T ss_pred             EEEEEEECCCCcEEeeEecCcEEEeEeEEEEEEEcC-CeEEEEECCc
Confidence            999999999999999999976776434455555664 5999999775


No 7  
>2ezd_A High mobility group protein HMG-I/HMG-Y; DNA binding protein, minor groove DNA binding, transcriptional CO-activator, architectural factor; HET: DNA; NMR {Homo sapiens} SCOP: j.10.1.1 PDB: 2eze_A*
Probab=97.37  E-value=8.2e-05  Score=46.78  Aligned_cols=18  Identities=61%  Similarity=1.003  Sum_probs=15.6

Q ss_pred             CCCCCCCCCCCCCCCCCC
Q 021751           81 EITRRPRGRPAGSKNKPK   98 (308)
Q Consensus        81 ~~~rrpRGRPpGSknKpk   98 (308)
                      ...|||||||.|||||.-
T Consensus         2 ptpKrpRgRpkGSKNk~~   19 (26)
T 2ezd_A            2 PTPKRPRGRPKGSKNKGA   19 (26)
T ss_dssp             CSCCCCSSCCTTCCCCSC
T ss_pred             CCCcCCCCCcCcccccCc
Confidence            357999999999999964


No 8  
>2k9i_A Plasmid PRN1, complete sequence; plasmid COPY control protein, ribbon helix helix protein, DNA binding protein; NMR {Sulfolobus islandicus} PDB: 3ft7_A
Probab=37.61  E-value=27  Score=23.33  Aligned_cols=24  Identities=4%  Similarity=0.036  Sum_probs=18.3

Q ss_pred             EEEecCCCcHHHHHHHHHHHcCCc
Q 021751          115 VMEIADGCDIVESVATFARRRQRG  138 (308)
Q Consensus       115 VIrL~~GeDIvesI~~Farr~~~a  138 (308)
                      .|.|.=-+|+.+.|..+|.+.+++
T Consensus        11 ~i~vrl~~el~~~l~~~a~~~g~s   34 (55)
T 2k9i_A           11 KLGVYIPQEWHDRLMEIAKEKNLT   34 (55)
T ss_dssp             EEEEEECHHHHHHHHHHHHHHTCC
T ss_pred             eEEEEcCHHHHHHHHHHHHHhCCC
Confidence            344444589999999999998864


No 9  
>4i95_A Putative uncharacterized protein; lipocalin-like domain of PF13924 family, structural genomics center for structural genomics, JCSG; HET: MSE; 1.81A {Bacteroides eggerthii} PDB: 4gzv_A
Probab=32.00  E-value=29  Score=29.62  Aligned_cols=41  Identities=24%  Similarity=0.395  Sum_probs=33.4

Q ss_pred             ceEEEEeeceeeeEEEcCCCCCCceEeeecceEEEE-------eeeeccC
Q 021751          138 GVCILSGTGTVTNVTLRQPASPGAIVSLHGRFEILS-------LSGSFLP  180 (308)
Q Consensus       138 a~~VLSgiGAVsnVTLr~~~~~g~~~tleG~FEILS-------LsGnis~  180 (308)
                      ..=|||.=|+..|++++.  ...++++..|.|||.|       +..|+.+
T Consensus        37 ~lKIlSdDgtF~Ni~m~~--~~~aiIt~~GtY~~~SD~~Y~E~IeKni~l   84 (142)
T 4i95_A           37 TFKVLSDDGRIVNFTIRP--GTDAIITGYGTYRQISAAAYKESIEKNIHL   84 (142)
T ss_dssp             EEEEECTTSEEEEEECCT--TSCCEEEEEEEEEEEETTEEEEEEEEESSS
T ss_pred             cEEEEcCCCcEEEEEEec--CCCcEEEEeEEEEecCCcceeeeecccccC
Confidence            466899999999999983  4689999999999986       5555544


No 10 
>1t3g_A X-linked interleukin-1 receptor accessory protein-like 1; TIR, IL-1RAPL, IL-1R, TLR, membrane protein; 2.30A {Homo sapiens}
Probab=25.32  E-value=41  Score=27.92  Aligned_cols=27  Identities=15%  Similarity=0.251  Sum_probs=24.2

Q ss_pred             ecCCCcHHHHHHHHHHHcCCceEEEEe
Q 021751          118 IADGCDIVESVATFARRRQRGVCILSG  144 (308)
Q Consensus       118 L~~GeDIvesI~~Farr~~~a~~VLSg  144 (308)
                      +.+|++|++.|.+..++-.+.++|||-
T Consensus        51 ~~~G~~i~~~i~~~I~~Sr~~IvVlS~   77 (159)
T 1t3g_A           51 LIPTGTYIEDVARCVDQSKRLIIVMTP   77 (159)
T ss_dssp             CCCCTTHHHHHHHHHHTBSEEEEEECH
T ss_pred             ccCccchHHHHHHHHHHcCEEEEEEcc
Confidence            679999999999998888899999875


Done!