Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>021753
MKSNNATVLTLAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLKKGKPFIWVP
EKDMHNVNTIIDERGSFAVASPTPGPLAKLLHSIKKIPTRVALSGDIAPLKSEKAQLAAE
CLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLKDLLDEREKYVVYKFNISSCMY
IDGHGGTHEVDLKDVQTSKADMLAPLSAKLIDGINQSEARRKALVLFCFVYLNANAKDAF
MLAVDRKGFDVLGKVPGPATKDGMPGFLWKEFRFTFKEEAHDVESFCSQLAQMEEEVVRK
VSGFSGLA

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  021753
        (308 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2095928 - symbol:AT3G04020 "AT3G04020" species...   775  5.5e-77   1


>TAIR|locus:2095928 [details] [associations]
            symbol:AT3G04020 "AT3G04020" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR012349 EMBL:CP002686 GO:GO:0016491
            GO:GO:0010181 Gene3D:2.30.110.10 SUPFAM:SSF50475 IPI:IPI00541247
            RefSeq:NP_187052.4 UniGene:At.40916 ProteinModelPortal:F4J2F8
            PRIDE:F4J2F8 DNASU:819557 EnsemblPlants:AT3G04020.1 GeneID:819557
            KEGG:ath:AT3G04020 OMA:SSCMFID ArrayExpress:F4J2F8 Uniprot:F4J2F8
        Length = 304

 Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
 Identities = 147/308 (47%), Positives = 216/308 (70%)

Query:     1 MKSNNATVLTLAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLKKGKPFIWVP 60
             MK + A +  LAEKCK ++ +NWQG LNT+K + + S   I+TSK+KY++++GKP++WVP
Sbjct:     2 MKGSKANLSALAEKCKTVIVSNWQGYLNTVKPEDKAS--IIHTSKIKYVMRRGKPYLWVP 59

Query:    61 EKDMHNVNTIIDERGSFAVASPTPGPLAKLLHSIKKIPTRVALSGDIAPLKSEKAQLAAE 120
             E + HNVN + DERGSF++A P PGPLA L  SI K+P RVA +G+I P+K ++     +
Sbjct:    60 ESEPHNVNIMFDERGSFSIAHPYPGPLAALFKSIGKLPERVAFTGEIVPVKEKRVDAVKK 119

Query:   121 CLKEVMLSEQRVIGEXXXXXXXXXXXXNFITTSRNENLKDLL-DEREKYVVYKFNISSCM 179
              ++E + SE + I +            + +  SR ++L+ L+ D +EKYV+YKF  SSCM
Sbjct:   120 YVEEAIQSEMKAISDTPNSVRSILNSSDQMYASRCDSLRALINDAKEKYVIYKFVPSSCM 179

Query:   180 YIDGHGGTHEVDLKDVQTSKADMLAPLSAKLIDGINQSEARRKALVLFCFVYLNANAKDA 239
             +ID +G T E+DLK ++ SK D L   S KL+DGIN++E+RR+AL+LFC  +L+ NA+DA
Sbjct:   180 FIDPNG-TKEIDLKVLELSKPDPLGTWSTKLVDGINKNESRRRALILFCLYFLDINARDA 238

Query:   240 FMLAVDRKGFDVLGKVPGPATKDGMPGFLWKEFRFTFKEEAHDVESFCSQLAQMEEEVVR 299
             +M++VDRKGF +LGKVP  + ++    + W+EFRF F+EE  DVE+FC QL +ME+EVV 
Sbjct:   239 YMVSVDRKGFHLLGKVP--SEQEAGDEYQWREFRFEFEEEVKDVEAFCHQLVEMEQEVVS 296

Query:   300 KVSGFSGL 307
             K +  +GL
Sbjct:   297 KFTDHTGL 304


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.133   0.381    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      308       296   0.00093  115 3  11 22  0.40    34
                                                     33  0.44    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  599 (64 KB)
  Total size of DFA:  201 KB (2114 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.59u 0.13s 23.72t   Elapsed:  00:00:01
  Total cpu time:  23.60u 0.13s 23.73t   Elapsed:  00:00:01
  Start:  Fri May 10 10:14:56 2013   End:  Fri May 10 10:14:57 2013

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