Query 021753
Match_columns 308
No_of_seqs 157 out of 527
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 08:48:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021753.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021753hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dnh_A Uncharacterized protein 100.0 3.9E-50 1.3E-54 370.7 22.4 229 8-300 25-258 (258)
2 2arz_A Hypothetical protein PA 100.0 6E-48 2.1E-52 352.0 24.3 236 7-302 4-242 (247)
3 1xhn_A CREG, cellular represso 100.0 2.9E-28 9.8E-33 213.3 16.8 164 6-200 14-183 (184)
4 3gas_A Heme oxygenase; FMN-bin 100.0 4.4E-28 1.5E-32 223.6 17.0 146 11-199 87-239 (259)
5 3swj_A CHUZ, putative uncharac 99.9 1.2E-26 4.3E-31 213.0 17.3 148 9-199 85-239 (251)
6 3tgv_A Heme-binding protein HU 99.9 4.1E-25 1.4E-29 187.2 13.7 134 12-187 4-141 (148)
7 1vl7_A Hypothetical protein AL 99.9 5.5E-21 1.9E-25 162.4 13.7 136 9-186 17-157 (157)
8 3gas_A Heme oxygenase; FMN-bin 99.6 1.9E-15 6.4E-20 139.2 9.9 79 208-301 3-82 (259)
9 3swj_A CHUZ, putative uncharac 99.5 5.5E-15 1.9E-19 135.4 7.6 78 208-301 4-82 (251)
10 1rfe_A Hypothetical protein RV 99.4 9.5E-12 3.3E-16 104.7 16.1 143 1-183 2-146 (162)
11 2hq7_A Protein, related to gen 99.4 4.9E-12 1.7E-16 104.5 13.2 136 11-196 7-144 (146)
12 2iab_A Hypothetical protein; N 99.3 1.2E-11 4E-16 104.7 12.6 132 11-196 13-146 (155)
13 3ec6_A General stress protein 99.3 4.9E-11 1.7E-15 98.4 15.9 126 10-185 3-130 (139)
14 3db0_A LIN2891 protein; putati 99.3 7E-11 2.4E-15 95.8 14.6 122 11-182 6-127 (128)
15 2i02_A General stress protein 99.3 1.8E-11 6.1E-16 101.8 11.1 126 10-184 10-138 (148)
16 3f7e_A Pyridoxamine 5'-phospha 99.2 3.7E-11 1.3E-15 98.1 10.5 122 13-179 6-127 (131)
17 2asf_A Hypothetical protein RV 99.2 1.2E-10 4E-15 95.9 13.1 122 12-185 11-134 (137)
18 2re7_A Uncharacterized protein 99.2 3.6E-10 1.2E-14 92.1 14.9 125 10-183 6-133 (134)
19 2fhq_A Putative general stress 99.2 1.9E-10 6.5E-15 94.3 12.5 124 11-186 9-134 (141)
20 2hhz_A Pyridoxamine 5'-phospha 99.1 1.3E-09 4.3E-14 91.0 14.9 126 12-186 4-132 (150)
21 2aq6_A Pyridoxine 5'-phosphate 99.1 2E-09 6.7E-14 88.8 13.5 132 11-182 6-143 (147)
22 2ig6_A NIMC/NIMA family protei 99.1 4.8E-09 1.6E-13 88.3 15.4 124 11-186 19-144 (150)
23 3dmb_A Putative general stress 98.9 2.5E-08 8.4E-13 83.5 13.9 126 11-186 8-136 (147)
24 2hti_A BH0577 protein; structu 98.9 4.4E-08 1.5E-12 84.7 14.6 98 7-114 10-111 (185)
25 2fg9_A 5-nitroimidazole antibi 98.9 2.7E-08 9.1E-13 85.8 12.8 100 9-114 25-127 (178)
26 3u5w_A Putative uncharacterize 98.9 3.7E-08 1.3E-12 82.6 13.1 87 12-115 12-98 (148)
27 2hq9_A MLL6688 protein; struct 98.8 4.9E-08 1.7E-12 81.2 13.4 88 9-114 7-94 (149)
28 2htd_A Predicted flavin-nucleo 98.8 6E-08 2.1E-12 80.5 12.6 85 11-114 28-114 (140)
29 3u35_A General stress protein; 98.8 4.3E-08 1.5E-12 85.4 11.3 127 10-186 26-155 (182)
30 2qea_A Putative general stress 98.8 8.8E-08 3E-12 81.1 12.8 122 11-185 5-131 (160)
31 2q9k_A Uncharacterized protein 98.7 9.7E-08 3.3E-12 80.6 12.3 116 13-196 12-130 (151)
32 3cp3_A Uncharacterized protein 98.7 1.8E-07 6.2E-12 77.9 13.3 116 11-179 16-135 (148)
33 3fkh_A Putative pyridoxamine 5 98.7 1.2E-07 4.2E-12 79.0 11.7 123 12-192 11-133 (138)
34 2fur_A Hypothetical protein; s 98.5 3.9E-07 1.3E-11 80.6 10.7 99 9-114 19-118 (209)
35 3ba3_A Protein LP_0091, pyrido 98.5 1.1E-06 3.6E-11 74.1 12.7 128 12-185 4-136 (145)
36 2vpa_A NIMA-related protein; c 98.4 8.1E-07 2.8E-11 79.2 9.9 102 10-114 43-147 (216)
37 1dnl_A Pyridoxine 5'-phosphate 98.2 5E-06 1.7E-10 73.2 10.1 77 20-114 29-106 (199)
38 1ty9_A Phenazine biosynthesis 98.2 1.3E-05 4.6E-10 71.8 12.1 77 20-114 54-131 (222)
39 2i51_A Uncharacterized conserv 98.0 5.6E-05 1.9E-09 66.1 11.7 140 23-185 25-172 (195)
40 1nrg_A Pyridoxine 5'-phosphate 98.0 4.9E-05 1.7E-09 69.8 11.0 76 22-115 78-154 (261)
41 2ou5_A Pyridoxamine 5'-phospha 97.9 6.7E-05 2.3E-09 64.6 10.8 122 23-186 30-157 (175)
42 1ci0_A Protein (PNP oxidase); 97.9 9.7E-05 3.3E-09 66.4 12.2 76 21-114 54-132 (228)
43 2ol5_A PAI 2 protein; structur 97.7 0.00031 1.1E-08 61.7 12.0 98 10-114 10-113 (202)
44 2a2j_A Pyridoxamine 5'-phospha 97.6 0.00035 1.2E-08 63.5 10.6 76 21-115 79-155 (246)
45 3in6_A FMN-binding protein; st 97.1 0.011 3.8E-07 49.6 13.2 65 11-80 18-85 (148)
46 3r5l_A Deazaflavin-dependent n 96.3 0.033 1.1E-06 45.1 10.1 81 21-128 14-99 (122)
47 3r5z_A Putative uncharacterize 95.4 0.25 8.4E-06 41.2 11.9 99 25-175 40-144 (145)
48 3r5y_A Putative uncharacterize 95.0 0.13 4.5E-06 42.9 9.3 78 24-128 41-123 (147)
49 3h96_A F420-H2 dependent reduc 94.9 0.13 4.5E-06 42.7 9.1 101 23-175 31-142 (143)
50 3a6r_A FMN-binding protein; el 92.4 0.24 8.2E-06 40.0 6.0 85 13-114 4-96 (122)
51 1unn_C POL IV, DNA polymerase 40.2 13 0.00044 28.6 2.0 31 274-304 11-41 (115)
No 1
>3dnh_A Uncharacterized protein ATU2129; APC6114, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2, protein structure initiative; 1.94A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.9e-50 Score=370.71 Aligned_cols=229 Identities=16% Similarity=0.202 Sum_probs=205.0
Q ss_pred CCCHHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEec-CCeEEEEecCCchhhcccccCCCceEEEeCCCC-C
Q 021753 8 VLTLAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLK-KGKPFIWVPEKDMHNVNTIIDERGSFAVASPTP-G 85 (308)
Q Consensus 8 ~~s~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d-~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~-~ 85 (308)
..+.++.+|+||+.+++|+|+|++. .+|+|++|.+.|+.| +|.|||++|.++.|++||..||||||+|.++.. +
T Consensus 25 ~~~~~~~ar~lL~~~~~g~LaTv~~----~dG~P~~s~v~y~~d~~g~~~~~~s~~~~h~~NL~~dprvSl~V~~~~~~d 100 (258)
T 3dnh_A 25 PFEAVRVARDVLHTSRTAALATLDP----VSGYPYTTATNIGIEPDGTPFFFAAGLTLHARNMETDARISVTLAPFGKGD 100 (258)
T ss_dssp -CCHHHHHHHHHHHCCEEEEEEECT----TTCCEEEEEEECEECTTSCEEEEEETTSHHHHHHHHCCEEEEEECCGGGSC
T ss_pred CHHHHHHHHHHHHhCCEEEEEeccC----CCCceEEEEEEEEECCCCCEEEEEeCCcHHHHHHhhCCCEEEEEecCCCCC
Confidence 3478999999999999999999972 234999999999999 999999999999999999999999999998754 5
Q ss_pred chhhhhcccCCCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchhhhhccC
Q 021753 86 PLAKLLHSIKKIPTRVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLKDLLDER 165 (308)
Q Consensus 86 ~l~~~~~~~~~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~~~ld~~ 165 (308)
++. ++||+|+|+++++++++. +.++++|++ |||+++.|.+ .
T Consensus 101 ~~~---------~~rvtl~G~a~~v~~~e~----~~l~~~y~~-------------------------rhP~a~~~~~-~ 141 (258)
T 3dnh_A 101 ALT---------LPRLTLVGRADRIGPDEV----PLAIARYIA-------------------------RYPKAKLYLS-L 141 (258)
T ss_dssp GGG---------SCEEEEEEEEEECCGGGH----HHHHHHHHH-------------------------HCTTHHHHTS-S
T ss_pred hhh---------CCeEEEEEEEEEcCchHH----HHHHHHHHH-------------------------HCcChHHccc-C
Confidence 666 899999999999987753 568999999 9999999998 9
Q ss_pred CCeEEEEEEEeEEEEEeCCCc-eeeechhhhcc--cccccchhhHHHHHHHHhhchhHHHHHHHHHHHhccCCCCceEEE
Q 021753 166 EKYVVYKFNISSCMYIDGHGG-THEVDLKDVQT--SKADMLAPLSAKLIDGINQSEARRKALVLFCFVYLNANAKDAFML 242 (308)
Q Consensus 166 ~df~~~rL~~~~~~lv~gfG~-a~~v~~~d~~~--A~pDpl~~~~~~~l~hmN~dh~~~~al~~~~~~~~~~~~~~a~~~ 242 (308)
+||.||||+|++++|++|||+ ++||+++||.+ ++||||+..|++||+|||+|| +++..||+ +.++..++|+|+
T Consensus 142 ~df~l~rl~~~~v~~v~GFG~~a~~v~~~d~~~~~a~~d~l~~~~~~ii~hmN~dH---d~l~~~~~-~~~~~~~~a~~~ 217 (258)
T 3dnh_A 142 PDTRLYRLRTEGVQINGGPARNASNITPADLRTDLSGAEELMAAAESEATRLNAIK---GEASRLAV-LAGAKTGRWKIT 217 (258)
T ss_dssp TTEEEEEEEEEEEEEEC------CCCCHHHHSCCCTTCHHHHHHHHHHHHHHHTST---THHHHHHH-HTTCCCSSCEEE
T ss_pred CCeEEEEEEEeEEEEEcccCcccccCCHHHhcccCCCCchhHHHHHHHHHHHHhhH---HHHHHHHH-hCCCCCCcEEEE
Confidence 999999999999999999999 99999999999 889999999999999999999 67999999 989888999999
Q ss_pred eecCCCceEEeecCCCCCCCCCCCccceEEEeeCCCcCCCHHHHHHHHHHHHHHHHhh
Q 021753 243 AVDRKGFDVLGKVPGPATKDGMPGFLWKEFRFTFKEEAHDVESFCSQLAQMEEEVVRK 300 (308)
Q Consensus 243 ~vDr~G~dlr~~~~~~~~~~~~~~~~~~~~Rl~F~~pv~~~~~~~~~l~~l~~~A~~~ 300 (308)
+||++||||+++ ++++||+|+ +|++++|++|++|+++|++.
T Consensus 218 ~vD~~G~dl~~~--------------~~~~Ri~F~---~d~~~~r~~lv~m~~~ar~~ 258 (258)
T 3dnh_A 218 SIDPDGIDLASA--------------SDLARLWFA---ERVETLKQFEKALAQLLKGS 258 (258)
T ss_dssp EEETTEEEEECS--------------SCEEEEECS---SCCCSHHHHHHHHHHHTC--
T ss_pred EEccCcCEEEEC--------------CEEEEeeCC---CCHHHHHHHHHHHHHHhhcC
Confidence 999999999984 578999999 99999999999999999863
No 2
>2arz_A Hypothetical protein PA4388; hypothetical protein,structural genomics,MCSG, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa} SCOP: b.45.1.1
Probab=100.00 E-value=6e-48 Score=352.03 Aligned_cols=236 Identities=17% Similarity=0.201 Sum_probs=213.7
Q ss_pred CCCCHHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEec-CCeEEEEecCCchhhcccccCCCceEEEeCCCC-
Q 021753 7 TVLTLAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLK-KGKPFIWVPEKDMHNVNTIIDERGSFAVASPTP- 84 (308)
Q Consensus 7 ~~~s~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d-~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~- 84 (308)
..++.++.+|++|+.+++|+|+|++... +|+|++|.+.|+.+ +|.+||+++..+.|++||..||+|||+|.++..
T Consensus 4 ~~~~~~~~~r~ll~~~~~~~LaT~~~~~---dG~P~~s~v~~~~d~~g~~~f~~s~~s~k~~nl~~nprvsl~v~~~~~~ 80 (247)
T 2arz_A 4 MSVEAAKNARELLLKEYRAVLSTHSKKW---PGFPFGSVVPYCLDAEGRPLILISRIAQHTHNLQADPRCSMLVGERGAE 80 (247)
T ss_dssp -CHHHHHHHHHHHHHCSEEEEEEECSSS---TTCEEEEEEECEECTTSCEEEEEETTSHHHHHHHHCCEEEEEEECTTCS
T ss_pred CChHHHHHHHHHHHhCCEEEEEEcCCCC---CCcceEEEEEEEECCCCCEEEEEeChhHHHHHHHhCCCeEEEEecCCCC
Confidence 4567889999999999999999997422 34999999999999 899999999999999999999999999987653
Q ss_pred CchhhhhcccCCCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchhhhhcc
Q 021753 85 GPLAKLLHSIKKIPTRVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLKDLLDE 164 (308)
Q Consensus 85 ~~l~~~~~~~~~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~~~ld~ 164 (308)
+++. .++|+|.|+++.+++++ .+.+++.|.+ +||..+.|.+
T Consensus 81 ~~~~---------~~~v~l~G~a~~v~d~e----~~~~~~~~~~-------------------------~~P~~~~~~~- 121 (247)
T 2arz_A 81 DIQA---------VGRLTLLAEARQLAEEE----VAAAAERYYR-------------------------YFPESADYHR- 121 (247)
T ss_dssp STTS---------SCEEEEEEEEEECCHHH----HHHHHHHHHH-------------------------HCGGGTTCBT-
T ss_pred Chhh---------CceEEEEEEEEECCcHH----HHHHHHHHHH-------------------------HCcChhhccc-
Confidence 5555 78999999999998643 2458899988 9999877876
Q ss_pred CCCeEEEEEEEeEEEEEeCCCceeeechhhhcccccccchh-hHHHHHHHHhhchhHHHHHHHHHHHhccCCCCceEEEe
Q 021753 165 REKYVVYKFNISSCMYIDGHGGTHEVDLKDVQTSKADMLAP-LSAKLIDGINQSEARRKALVLFCFVYLNANAKDAFMLA 243 (308)
Q Consensus 165 ~~df~~~rL~~~~~~lv~gfG~a~~v~~~d~~~A~pDpl~~-~~~~~l~hmN~dh~~~~al~~~~~~~~~~~~~~a~~~~ 243 (308)
.++|.||||+|++++|++|||+++||+++||.+| |||+. .+++||+|||+||. +++..||+++.++..+.|+|++
T Consensus 122 ~~~~~l~rl~~~~~~~~~gfG~~~~v~~~~~~~a--dp~~~~~~~~ii~hmN~dH~--~~l~~~~~~~~~~~~~~~~~~~ 197 (247)
T 2arz_A 122 VHDFDFWVLQPVQWRFIGGFGAIHWLAAERVPLA--NPFAGEAERGMVEHMNSDHA--AAIAHYVELAGLPAHAAAQLAG 197 (247)
T ss_dssp TBBEEEEEEEEEEEEEECTTCCEEEEETTTSCCC--CTTTTHHHHHHHHHHHHHCH--HHHHHHHHHHCCCCSSCCEEEE
T ss_pred ccCcEEEEEEEEEEEEEcCCCceEEeChhhhccc--hhhhhhhHHHHHHHHHHHHH--HHHHHHHHHhCCCCccceEEEE
Confidence 8999999999999999999999999999999998 99999 99999999999999 9999999999998878899999
Q ss_pred ecCCCceEEeecCCCCCCCCCCCccceEEEeeCCCcCCCHHHHHHHHHHHHHHHHhhhc
Q 021753 244 VDRKGFDVLGKVPGPATKDGMPGFLWKEFRFTFKEEAHDVESFCSQLAQMEEEVVRKVS 302 (308)
Q Consensus 244 vDr~G~dlr~~~~~~~~~~~~~~~~~~~~Rl~F~~pv~~~~~~~~~l~~l~~~A~~~~~ 302 (308)
||++||||+++ .+++||+|++|++|.++++++|++|+++|++.+.
T Consensus 198 iD~~G~~l~~~--------------~~~~Ri~F~~~~~~~~~~~~~l~~m~~~a~~~~~ 242 (247)
T 2arz_A 198 IDTEGFHLRIG--------------QGLHWLPFPAACGNPGAVRQALVQLARAERWPTV 242 (247)
T ss_dssp ECSSEEEEEET--------------TEEEEEECSSCCCSHHHHHHHHHHHHHCSSCCCC
T ss_pred EccCCCEEEEC--------------CEEEEEeCCCcCCCHHHHHHHHHHHHHHhHhhcC
Confidence 99999999995 3689999999999999999999999999987663
No 3
>1xhn_A CREG, cellular repressor of E1A-stimulated genes; beta-barrel, unknown function; HET: MSE; 1.95A {Homo sapiens} SCOP: b.45.1.1
Probab=99.96 E-value=2.9e-28 Score=213.28 Aligned_cols=164 Identities=13% Similarity=0.185 Sum_probs=136.9
Q ss_pred CCCCCHHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEe----c-CCeEEEEecCCchhhcccccCCCceEEEe
Q 021753 6 ATVLTLAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYML----K-KGKPFIWVPEKDMHNVNTIIDERGSFAVA 80 (308)
Q Consensus 6 ~~~~s~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~----d-~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~ 80 (308)
..++..++.||+|++.+++|+|||++...+ .+|+||+|++.|+. + +|.|||+++.++.|++||..||+|||+|.
T Consensus 14 ~~~~~~~~~ar~ll~~~~~g~LaTi~~~~~-~dG~P~~s~v~~~~~~~~d~~g~~~f~~s~~~~~~~nl~~nprvSl~v~ 92 (184)
T 1xhn_A 14 PPREDAARVARFVTHVSDWGALATISTLEA-VRGRPFADVLSLSDGPPGAGSGVPYFYLSPLQLSVSNLQENPYATLTMT 92 (184)
T ss_dssp CCTTCHHHHHHHHHHHCSEEEEEEECCCGG-GTTCEEEEEEECBSCSTTCCCSCCEEEECTTSHHHHHHHHCCEEEEEEE
T ss_pred CCChHHHHHHHHHHHhCCEEEEEecccCCC-CCCcceEEEEEEEeccCcCCCCCEEEEEeCccHhHHHHhhCCCEEEEEe
Confidence 345789999999999999999999974210 04599999999998 7 79999999999999999999999999999
Q ss_pred CCCCCchhh-hhcccCCCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchh
Q 021753 81 SPTPGPLAK-LLHSIKKIPTRVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLK 159 (308)
Q Consensus 81 ~~~~~~l~~-~~~~~~~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~ 159 (308)
+..+..+.. ..++..+.++||+|.|+++++++++. +.++++|++ +||.++
T Consensus 93 ~~~~~~~~~~~~dp~~~~~~rvtl~G~a~~v~d~e~----~~~~~~~~~-------------------------~hP~~~ 143 (184)
T 1xhn_A 93 LAQTNFCKKHGFDPQSPLCVHIMLSGTVTKVNETEM----DIAKHSLFI-------------------------RHPEMK 143 (184)
T ss_dssp GGGTTHHHHHTCCTTSTTSCEEEEEEEEEECCGGGH----HHHHHHHHH-------------------------HCGGGG
T ss_pred cCCCccccccCCCCccccCceEEEEEEEEECChHHH----HHHHHHHHH-------------------------HCcChh
Confidence 765322211 12222334789999999999987542 457889998 999999
Q ss_pred hhhccCCCeEEEEEEEeEEEEEeCCCceeeechhhhccccc
Q 021753 160 DLLDEREKYVVYKFNISSCMYIDGHGGTHEVDLKDVQTSKA 200 (308)
Q Consensus 160 ~~ld~~~df~~~rL~~~~~~lv~gfG~a~~v~~~d~~~A~p 200 (308)
.|++ .++|.||||+|++++|++|||+++||+++||.+|++
T Consensus 144 ~~~~-~~~~~~~~l~i~~i~~v~gFG~~~~v~~~~~~~a~~ 183 (184)
T 1xhn_A 144 TWPS-SHNWFFAKLNITNIWVLDYFGGPKIVTPEEYYNVTV 183 (184)
T ss_dssp GSCG-GGCCEEEEEEEEEEEEECSSSSCEECCHHHHHHCC-
T ss_pred Hccc-CCCEEEEEEEEeEEEEEccCCceEEeCHHHHhhccC
Confidence 9988 899999999999999999999999999999998876
No 4
>3gas_A Heme oxygenase; FMN-binding split barrel, oxidoreductase; HET: HEM; 1.80A {Helicobacter pylori}
Probab=99.96 E-value=4.4e-28 Score=223.60 Aligned_cols=146 Identities=10% Similarity=0.127 Sum_probs=130.5
Q ss_pred HHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEecCCeEEEEecCCchhhcccccCC-CceEEEeCCCC---Cc
Q 021753 11 LAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLKKGKPFIWVPEKDMHNVNTIIDE-RGSFAVASPTP---GP 86 (308)
Q Consensus 11 ~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d~G~p~~~vs~~a~Ht~nl~~dp-r~SL~v~~~~~---~~ 86 (308)
..+.++++++.+++++|||++. +|+|++|+++|+.++|.+||+||.+++|++||..|| ||||+|.+++. ++
T Consensus 87 l~~ei~~ll~~~~~~~LAT~~~-----~G~P~~S~v~f~~~~g~~~iliS~lA~Ht~NL~~np~rvSllviede~~~~~~ 161 (259)
T 3gas_A 87 VEEEVKAFKEGFDSVCLATLHP-----NGHVVCSYAPLMSDGKQYYIYVSEVAEHFAGLKNNPHNVEVMFLEDESKAKSA 161 (259)
T ss_dssp HHHHHHHHHHTCSEEEEEEECT-----TSCEEEEEEEEEEETTEEEEEEETTSHHHHHHHHSTTSEEEEEECCTTTSSBT
T ss_pred HHHHHHHHHHhCCEEEEEeeCc-----CCCEEEEEEEEEEECCEEEEEEeCchHHHHHHHhCCCeEEEEEEeCccccCCh
Confidence 4578999999999999999973 349999999999999999999999999999999999 99999988654 56
Q ss_pred hhhhhcccCCCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcc---hhhhhc
Q 021753 87 LAKLLHSIKKIPTRVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNEN---LKDLLD 163 (308)
Q Consensus 87 l~~~~~~~~~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~---~~~~ld 163 (308)
++ .+|||+.|+++++++++ . ++.++++|++ |||+ ++.|.+
T Consensus 162 ~a---------~~Rlt~~g~A~~v~~~~-~--~~~~~~~~~~-------------------------r~p~~~~~~~~~~ 204 (259)
T 3gas_A 162 IL---------RKRLRYKTNTRFIERGA-E--FDKAFDSFIE-------------------------KTGGAGGIKTIRA 204 (259)
T ss_dssp TB---------CCEEEEEEEEEEECSSH-H--HHHHHHHHHH-------------------------HHCSTTTHHHHHT
T ss_pred hh---------cCeEEEEEEEEECCCch-H--HHHHHHHHHH-------------------------HcCCchhhHhccc
Confidence 66 89999999999998742 2 3568899998 9998 778888
Q ss_pred cCCCeEEEEEEEeEEEEEeCCCceeeechhhhcccc
Q 021753 164 EREKYVVYKFNISSCMYIDGHGGTHEVDLKDVQTSK 199 (308)
Q Consensus 164 ~~~df~~~rL~~~~~~lv~gfG~a~~v~~~d~~~A~ 199 (308)
++||.||||+|++++||+|||+++||++++|....
T Consensus 205 -~~DF~l~rl~p~~~r~v~GFG~a~~l~~~~l~~~~ 239 (259)
T 3gas_A 205 -MQDFHLIALDFKEGRFVKGFGQAYDILGDKIAYVG 239 (259)
T ss_dssp -CTTEEEEEEEEEEEEEEEETTEEEEEETTEEEESC
T ss_pred -CCCeEEEEEEEeEEEEEccccEEEEeCHHHHHHhh
Confidence 99999999999999999999999999999988754
No 5
>3swj_A CHUZ, putative uncharacterized protein; heme oxygenase, bacterial iron aquisition, heme bindin; HET: HEM; 2.41A {Campylobacter jejuni}
Probab=99.94 E-value=1.2e-26 Score=213.01 Aligned_cols=148 Identities=10% Similarity=0.146 Sum_probs=131.1
Q ss_pred CCHHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEecCCeEEEEecCCchhhcccccCC-CceEEEeCCCC---
Q 021753 9 LTLAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLKKGKPFIWVPEKDMHNVNTIIDE-RGSFAVASPTP--- 84 (308)
Q Consensus 9 ~s~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d~G~p~~~vs~~a~Ht~nl~~dp-r~SL~v~~~~~--- 84 (308)
....+.+|+|++.+++++|||++. +|+|++|+++|+.++|.+||++|.++.|++||..|| ||||+|.+++.
T Consensus 85 ~~l~~e~~~ll~~~~~~~LAT~~~-----dG~P~~s~v~~~~~~g~~~~~~s~~a~h~~NL~~nP~rvSl~v~e~e~~~~ 159 (251)
T 3swj_A 85 SGVEKELNEFMLSFNSVALATLNA-----NGEVVCSYAPFVSTQWGNYIYISEVSEHFNNIKVNPNNIEIMFLEDESKAA 159 (251)
T ss_dssp SHHHHHHHHHHHTCSEEEEEEECT-----TSCEEEEEEEEEEETTEEEEEEETTSHHHHHHHHSTTCEEEEEECCTTTSS
T ss_pred hhHHHHHHHHHhhCCEEEEEEECC-----CCCEEEEEEEEEEECCEEEEEEeCchHHHHHHHhCCCeEEEEEEcCccccc
Confidence 467889999999999999999973 359999999999999999999999999999999999 99999987653
Q ss_pred CchhhhhcccCCCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcch---hhh
Q 021753 85 GPLAKLLHSIKKIPTRVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENL---KDL 161 (308)
Q Consensus 85 ~~l~~~~~~~~~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~---~~~ 161 (308)
++++ .+||++.|+++.+++++. ++.++++|.+ |||++ +.|
T Consensus 160 ~~~~---------~~rltl~G~a~~v~~~~e---~~~~~~~~~~-------------------------k~p~a~~~~~~ 202 (251)
T 3swj_A 160 SVIL---------RKRLRYRVNASFLERGER---FDQIYDEFEK-------------------------QTGGEGGIKTI 202 (251)
T ss_dssp CTTC---------CCEEEEEEEEEECCSSHH---HHHHHHHHHH-------------------------HHCSTTTHHHH
T ss_pred Cccc---------cceEEEEEEEEEecChhH---HHHHHHHHHH-------------------------HCCCchhhhhc
Confidence 5666 789999999999987532 2457888988 99985 566
Q ss_pred hccCCCeEEEEEEEeEEEEEeCCCceeeechhhhcccc
Q 021753 162 LDEREKYVVYKFNISSCMYIDGHGGTHEVDLKDVQTSK 199 (308)
Q Consensus 162 ld~~~df~~~rL~~~~~~lv~gfG~a~~v~~~d~~~A~ 199 (308)
.+ ++||.||||+|++++||+|||+++||+++||..+.
T Consensus 203 ~~-~~Df~l~rl~p~~~r~v~GFG~a~~l~~~~l~~~~ 239 (251)
T 3swj_A 203 RK-MLDFHLVKLEFKKGRFVKGFGQAYDIENGNVTHVG 239 (251)
T ss_dssp HT-CTTEEEEEEEEEEEEEEEETTEEEEESSSCCEESC
T ss_pred Cc-ccCEEEEEEEeeEEEEECCcceeEEeCHHHHHHhh
Confidence 66 89999999999999999999999999999998765
No 6
>3tgv_A Heme-binding protein HUTZ; 2.00A {Vibrio cholerae}
Probab=99.92 E-value=4.1e-25 Score=187.20 Aligned_cols=134 Identities=12% Similarity=0.176 Sum_probs=114.8
Q ss_pred HHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEecCCeEEEEecCCchhhcccccCCCceEEEeCCCC---Cchh
Q 021753 12 AEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLKKGKPFIWVPEKDMHNVNTIIDERGSFAVASPTP---GPLA 88 (308)
Q Consensus 12 ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~---~~l~ 88 (308)
-+.++.+++..++++|||++. +|+|++|.++|+.++|.+||++|.+++|++||..||||||+|.+++. ++++
T Consensus 4 ~~ei~~fl~~~~~~~LaT~~~-----~G~P~~s~v~~~~~~~~~~~~~s~~~~~~~nl~~~prvsl~v~~~~~~~~~~~~ 78 (148)
T 3tgv_A 4 EPEIKEFRQERKTLQLATVDA-----QGRPNVSYAPFVQNQEGYFVLISHIARHARNLEVNPQVSIMMIEDETEAKQLFA 78 (148)
T ss_dssp HHHHHHHHHHCCEEEEEEECT-----TCCEEEEEEEEEEETTEEEEEEETTSHHHHHHHHSCEEEEEEECCGGGCSCGGG
T ss_pred hHHHHHHHhhCCEEEEEEECC-----CCCEEEEEEEEEEECCEEEEEECCccHHHHHHHhCCCeEEEEecCcccccCccc
Confidence 357899999999999999974 35999999999999999999999999999999999999999987643 4555
Q ss_pred hhhcccCCCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcc-hhhhhccCCC
Q 021753 89 KLLHSIKKIPTRVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNEN-LKDLLDEREK 167 (308)
Q Consensus 89 ~~~~~~~~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~-~~~~ld~~~d 167 (308)
.+|||+.|++..+++++... +.+.++|.. +||. ++.|.+ ++|
T Consensus 79 ---------~~rltl~G~a~~v~~~~~~~--~~~~~~~~~-------------------------~~~~~a~~~~~-~~D 121 (148)
T 3tgv_A 79 ---------RKRLTFDAVASMVERDSELW--CQVIAQMGE-------------------------RFGEIIDGLSQ-LQD 121 (148)
T ss_dssp ---------CCEEEEEEEEEEECTTSHHH--HHHHHHHHH-------------------------HHCTHHHHHTT-CTT
T ss_pred ---------ceEEEEeeeEEEcCCCcHHH--HHHHHHHHh-------------------------hcchhhhHhhc-cCC
Confidence 88999999999998765432 456777776 7654 566776 999
Q ss_pred eEEEEEEEeEEEEEeCCCce
Q 021753 168 YVVYKFNISSCMYIDGHGGT 187 (308)
Q Consensus 168 f~~~rL~~~~~~lv~gfG~a 187 (308)
|.||||+|++++||+|||--
T Consensus 122 F~~~rl~p~~~r~V~GFG~~ 141 (148)
T 3tgv_A 122 FMLFRLQPEQGLFVKGFGLE 141 (148)
T ss_dssp EEEEEEEECSCCEEESCGGG
T ss_pred EEEEEEEeEEEEEECccccc
Confidence 99999999999999999954
No 7
>1vl7_A Hypothetical protein ALR5027; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, oxidoreductase; 1.50A {Nostoc SP} SCOP: b.45.1.1
Probab=99.85 E-value=5.5e-21 Score=162.42 Aligned_cols=136 Identities=10% Similarity=0.146 Sum_probs=112.7
Q ss_pred CCHHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEec-CCeEEEEecCCchhhcccccCCCceEEEeCCC---C
Q 021753 9 LTLAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLK-KGKPFIWVPEKDMHNVNTIIDERGSFAVASPT---P 84 (308)
Q Consensus 9 ~s~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d-~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~---~ 84 (308)
....+.++.+|..+..++|||++. +|.|++|.+.|+.+ +|.+||+.+..+.|++||..||++||+|..++ .
T Consensus 17 ~~~~~~~~~ll~~~~~~~LaTv~~-----dG~P~~~~v~~~~~~~g~~~f~t~~~s~k~~nl~~np~vsl~v~~~~~~~~ 91 (157)
T 1vl7_A 17 EKAQAEYAGFIQEFQSAIISTISE-----QGIPNGSYAPFVIDDAKNIYIYVSGLAVHTKNIEANPLVNVLFVDDEAKTN 91 (157)
T ss_dssp ------CHHHHTTCSEEEEEEECT-----TSCEEEEEEEEEECTTCCEEEEECTTSHHHHHHHHCCEEEEEEECCGGGCS
T ss_pred HhHHHHHHHHHHhCCEEEEEEECC-----CCCEEEEEEEEEEcCCCCEEEEEeCccHHHHHHHhCCcEEEEEEcCccccC
Confidence 456788999999999999999973 35999999999999 59999999999999999999999999998765 2
Q ss_pred CchhhhhcccCCCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcch-hhhhc
Q 021753 85 GPLAKLLHSIKKIPTRVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENL-KDLLD 163 (308)
Q Consensus 85 ~~l~~~~~~~~~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~-~~~ld 163 (308)
+++. ..+|++.|+++.+++++.. ++.+++.|.+ +||.. +.|.+
T Consensus 92 ~~~~---------~~~v~i~G~a~~v~~~~~~--~~~~~~~~~~-------------------------~~p~~~~~~~~ 135 (157)
T 1vl7_A 92 QIFA---------RRRLSFDCTATLIERESQK--WNQVVDQFQE-------------------------RFGQIIEVLRG 135 (157)
T ss_dssp SGGG---------CCEEEEEEEEEEECTTSHH--HHHHHHHHHH-------------------------HHTHHHHHHHH
T ss_pred Cccc---------CceEEEEEEEEEcCCCcHH--HHHHHHHHHH-------------------------HCchHHHHhhc
Confidence 4555 6899999999999876332 2457888888 89984 66666
Q ss_pred cCCCeEEEEEEEeEEEEEeCCCc
Q 021753 164 EREKYVVYKFNISSCMYIDGHGG 186 (308)
Q Consensus 164 ~~~df~~~rL~~~~~~lv~gfG~ 186 (308)
.++|.+|+|+|++++|++|||+
T Consensus 136 -~~~~~l~~l~~~~~~~~~GFG~ 157 (157)
T 1vl7_A 136 -LADFRIFQLTPKEGRFVIGFGA 157 (157)
T ss_dssp -HSCCEEEEEEEEEEEEECSSCC
T ss_pred -cCCEEEEEEEEeEEEEEcCcCC
Confidence 7899999999999999999995
No 8
>3gas_A Heme oxygenase; FMN-binding split barrel, oxidoreductase; HET: HEM; 1.80A {Helicobacter pylori}
Probab=99.60 E-value=1.9e-15 Score=139.22 Aligned_cols=79 Identities=14% Similarity=0.227 Sum_probs=73.3
Q ss_pred HHHHHHHhhchhHHHHHHHHHHHhccCC-CCceEEEeecCCCceEEeecCCCCCCCCCCCccceEEEeeCCCcCCCHHHH
Q 021753 208 AKLIDGINQSEARRKALVLFCFVYLNAN-AKDAFMLAVDRKGFDVLGKVPGPATKDGMPGFLWKEFRFTFKEEAHDVESF 286 (308)
Q Consensus 208 ~~~l~hmN~dh~~~~al~~~~~~~~~~~-~~~a~~~~vDr~G~dlr~~~~~~~~~~~~~~~~~~~~Rl~F~~pv~~~~~~ 286 (308)
++||+|||+||+ +++..||+++.++. +..|+|++||++||+|+++. ...+||+|++|++|++++
T Consensus 3 ~~ii~HMN~DH~--dal~~y~~~~~~~~~~~~a~m~~iD~~G~~l~~~~-------------~~~~ri~F~~~~~~~~~~ 67 (259)
T 3gas_A 3 NRIIEHMNAHHV--EDMKGLLKKFGQVHHAENVAFKSVDSQGIVIGYNN-------------NQTLRIEFNHEVKDPKDY 67 (259)
T ss_dssp HHHHHHHHHHCH--HHHHHHHHHHHCCCSCCSCEEEEEETTEEEEEETT-------------TEEEEEECSSCCCCGGGH
T ss_pred hHHHHHHHHhhH--HHHHHHHHHhCCCCCCCceEEEEEecCccEEEECC-------------ceEEEEeCCCcCCCHHHH
Confidence 579999999999 99999999999995 67999999999999999941 478999999999999999
Q ss_pred HHHHHHHHHHHHhhh
Q 021753 287 CSQLAQMEEEVVRKV 301 (308)
Q Consensus 287 ~~~l~~l~~~A~~~~ 301 (308)
|++|++|+++|++++
T Consensus 68 r~~lV~m~~~A~~~l 82 (259)
T 3gas_A 68 KNATIELCQSVEKTH 82 (259)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999885
No 9
>3swj_A CHUZ, putative uncharacterized protein; heme oxygenase, bacterial iron aquisition, heme bindin; HET: HEM; 2.41A {Campylobacter jejuni}
Probab=99.55 E-value=5.5e-15 Score=135.44 Aligned_cols=78 Identities=19% Similarity=0.327 Sum_probs=70.2
Q ss_pred HHHHHHHhhchhHHHHHHHHHHHhccCC-CCceEEEeecCCCceEEeecCCCCCCCCCCCccceEEEeeCCCcCCCHHHH
Q 021753 208 AKLIDGINQSEARRKALVLFCFVYLNAN-AKDAFMLAVDRKGFDVLGKVPGPATKDGMPGFLWKEFRFTFKEEAHDVESF 286 (308)
Q Consensus 208 ~~~l~hmN~dh~~~~al~~~~~~~~~~~-~~~a~~~~vDr~G~dlr~~~~~~~~~~~~~~~~~~~~Rl~F~~pv~~~~~~ 286 (308)
.+||+|||+||+ +++..||+++.++. ++.|+|++||++||+|.++. ...+||+|++|+ +++++
T Consensus 4 ~~i~~HMN~DH~--d~~~~~a~~~~~~~~~~~~~~~~iD~~g~~l~~~~-------------~~~~ri~F~~~~-~~~~~ 67 (251)
T 3swj_A 4 ESIISHMNDHHK--SNLVDLCKKFGGIEQVQDVFLKSVDFNGLDLVYND-------------KENLRVEFPKKA-DENTI 67 (251)
T ss_dssp HHHHHHHHHSCS--HHHHHHHHHHTCCSCCC-CEEEEEETTEEEEEC----------------CEEEEECSSCC-CTTTH
T ss_pred HHHHHHHHHhHH--HHHHHHHHHhCCCCCCCeeEEEEEecccCEEEeCC-------------ceEEEEeCCCCC-CHHHH
Confidence 579999999999 99999999999995 78999999999999999841 468999999999 99999
Q ss_pred HHHHHHHHHHHHhhh
Q 021753 287 CSQLAQMEEEVVRKV 301 (308)
Q Consensus 287 ~~~l~~l~~~A~~~~ 301 (308)
|.+|++|+++|++++
T Consensus 68 r~~lv~m~~~a~~~~ 82 (251)
T 3swj_A 68 KDTIISLCMSAKSEQ 82 (251)
T ss_dssp HHHHHHHHHHHSSSC
T ss_pred HHHHHHHHHhccccC
Confidence 999999999999874
No 10
>1rfe_A Hypothetical protein RV2991; structural genomics, TB, FMN BIN PSI, protein structure initiative, TB structural genomics consortium; 2.00A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=99.40 E-value=9.5e-12 Score=104.69 Aligned_cols=143 Identities=17% Similarity=0.138 Sum_probs=105.5
Q ss_pred CCCCCCCCCCHHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEecCCeEEEEecCCchhhcccccCCCceEEEe
Q 021753 1 MKSNNATVLTLAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLKKGKPFIWVPEKDMHNVNTIIDERGSFAVA 80 (308)
Q Consensus 1 ~~~~~~~~~s~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~ 80 (308)
|..++...++. +.++.+|..+..++|+|++. +|.|+++.+.|+.++|.+||..+..+.|.+||..||+++|+|.
T Consensus 2 ~~rr~~~~~~~-~~~~~~l~~~~~~~LaT~~~-----~G~P~~~pv~~~~~~~~l~~~t~~~~~k~~~l~~np~v~l~~~ 75 (162)
T 1rfe_A 2 TKQRADIVMSE-AEIADFVNSSRTGTLATIGP-----DGQPHLTAMWYAVIDGEIWLETKAKSQKAVNLRRDPRVSFLLE 75 (162)
T ss_dssp CCCCTTTCCCH-HHHHHHHHHCCCEEEEEECT-----TSCEEEEEECCEEETTEEEEEEETTSHHHHHHHHCCEEEEEEE
T ss_pred cccccccCCCH-HHHHHHHhcCcEEEEEEECC-----CCCEEEEEEEEEEECCEEEEEecCccHHHHHHhhCCeEEEEEE
Confidence 45555666775 77999999999999999863 3499999999999999999999999999999999999999998
Q ss_pred CCCCCchhhhhcccCCCCcEEEEEEEEEEcCchhHH-HHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchh
Q 021753 81 SPTPGPLAKLLHSIKKIPTRVALSGDIAPLKSEKAQ-LAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLK 159 (308)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~Rvtl~G~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~ 159 (308)
+... ... ...|++.|+++.+.+++.. ..+..+.+.|.. ...+...
T Consensus 76 ~~~~-~~~---------~~~v~~~G~a~~v~d~~~~~~~~~~l~~~~~~------------------------~~~~~~~ 121 (162)
T 1rfe_A 76 DGDT-YDT---------LRGVSFEGVAEIVEEPEALHRVGVSVWERYTG------------------------PYTDECK 121 (162)
T ss_dssp ECSS-GGG---------CEEEEEEEEEEEECCHHHHHHHHHHHHHHHTC------------------------CCCGGGH
T ss_pred cCCC-ccc---------ccEEEEEEEEEEeCChHHHHHHHHHHHHHhcC------------------------cccchhH
Confidence 6432 111 4589999999999875432 222223333321 0112233
Q ss_pred hhhc-cCCCeEEEEEEEeEEEEEeC
Q 021753 160 DLLD-EREKYVVYKFNISSCMYIDG 183 (308)
Q Consensus 160 ~~ld-~~~df~~~rL~~~~~~lv~g 183 (308)
.+.+ ...++.+|+|+|+++.+.+.
T Consensus 122 ~~~~~~~~~~~v~~i~~~~~~~~~~ 146 (162)
T 1rfe_A 122 PMVDQMMNKRVGVRIVARRTRSWDH 146 (162)
T ss_dssp HHHHHHTTTEEEEEEEEEEEEEEEG
T ss_pred HHHHhccCceEEEEEEEEEEEEecc
Confidence 3333 25799999999999998865
No 11
>2hq7_A Protein, related to general stress protein 26(GS2 B.subtilis; NP_350077.1, structural genomics, joint center for structural genomics; 2.00A {Clostridium acetobutylicum} SCOP: b.45.1.1
Probab=99.38 E-value=4.9e-12 Score=104.53 Aligned_cols=136 Identities=8% Similarity=-0.006 Sum_probs=102.0
Q ss_pred HHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEec--CCeEEEEecCCchhhcccccCCCceEEEeCCCCCchh
Q 021753 11 LAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLK--KGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPLA 88 (308)
Q Consensus 11 ~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d--~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l~ 88 (308)
..+.++.+|+.+..++|+|++. +|.|+++.+.|..+ +|.++|..+..+.|.+||..||+++|+|..+..
T Consensus 7 ~~~~~~~~l~~~~~~~LaT~~~-----~G~P~~~pv~~~~~~~~~~l~f~t~~~s~k~~~l~~np~v~l~~~~~~~---- 77 (146)
T 2hq7_A 7 FLIESNELVESSKIVMVGTNGE-----NGYPNIKAMMRLKHDGLKKFWLSTNTSTRMVERLKKNNKICLYFVDDNK---- 77 (146)
T ss_dssp HHHHHHHHHHHCSEEEEEEECG-----GGCEEEEEEEEEEEETTTEEEEEEECCHHHHHHHHHCCEEEEEEECSSS----
T ss_pred HHHHHHHHHhcCCEEEEEEECC-----CCCEEEEEEEEEEEcCCCEEEEEecCCCHHHHHHhhCCeEEEEEECCCC----
Confidence 5678999999999999999863 24899999999876 389999999999999999999999999987522
Q ss_pred hhhcccCCCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchhhhhccCCCe
Q 021753 89 KLLHSIKKIPTRVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLKDLLDEREKY 168 (308)
Q Consensus 89 ~~~~~~~~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~~~ld~~~df 168 (308)
...|.+.|+++.+.+.+... .+.+.+.. . .+|+. .+ .++|
T Consensus 78 ---------~~~v~v~G~a~~v~d~~~~~---~~~~~~~~---~---------------------~~~~~---~~-~~~~ 117 (146)
T 2hq7_A 78 ---------FAGLMLVGTIEILHDRASKE---MLWTDGCE---I---------------------YYPLG---ID-DPDY 117 (146)
T ss_dssp ---------SEEEEEEEEEEEECCHHHHH---HHCCTTHH---H---------------------HCTTG---GG-CTTE
T ss_pred ---------ceEEEEEEEEEEEcCHHHHH---HHHHHHHH---H---------------------HCCCC---CC-CCCE
Confidence 45899999999998754320 11111111 0 12221 12 5789
Q ss_pred EEEEEEEeEEEEEeCCCceeeechhhhc
Q 021753 169 VVYKFNISSCMYIDGHGGTHEVDLKDVQ 196 (308)
Q Consensus 169 ~~~rL~~~~~~lv~gfG~a~~v~~~d~~ 196 (308)
.+|||+|+++.+.+|+|++. ...+++.
T Consensus 118 ~~~~i~p~~~~~w~~~~~~~-f~~~~~~ 144 (146)
T 2hq7_A 118 TALCFTAEWGNYYRHLKNIT-FKIDEIY 144 (146)
T ss_dssp EEEEEEEEEEEEEETTEEEE-EEGGGC-
T ss_pred EEEEEEccEEEEEeCCCCeE-EEccccc
Confidence 99999999999999999763 3444543
No 12
>2iab_A Hypothetical protein; NP_828636.1, structural genomics, JOIN for structural genomics, JCSG; 2.00A {Streptomyces avermitilis}
Probab=99.33 E-value=1.2e-11 Score=104.70 Aligned_cols=132 Identities=12% Similarity=0.177 Sum_probs=99.6
Q ss_pred HHHHHHHHHhhCCceEEeeeccCCCCCC-CceeeeeeeeEecCCeEEEEecCCchhhcccccCCCceEEEeCCCCCchhh
Q 021753 11 LAEKCKNILAANWQGRLNTIKADAEGSK-ESIYTSKVKYMLKKGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPLAK 89 (308)
Q Consensus 11 ~ae~aRtll~~~~~~~LaT~~~~~~G~~-g~P~~S~v~y~~d~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l~~ 89 (308)
..+.++.+|..+..|.|+|++. + |.|+.+.+.|+.++|.+||+.+..+.+.+||..||+|+|+|....
T Consensus 13 ~~~~~~~~L~~~~~~~LaT~~~-----d~G~P~~~pv~~~~d~~~l~f~t~~~s~K~~~l~~np~Vsl~v~~~~------ 81 (155)
T 2iab_A 13 RIQDTLNRLELDVDAWVSTAGA-----DGGAPYLVPLSYLWDGETFLVATPAASPTGRNLSETGRVRLGIGPTR------ 81 (155)
T ss_dssp HHHHHHHHHHHCCEEEEEEECT-----TSSCEEEEEEECEECSSCEEEEEETTSHHHHHHHHHCEEEEEESSTT------
T ss_pred hHHHHHHHHhCCCeEEEEEecC-----CCCCceEEEEEEEEECCEEEEEECCCCHHHHHHhhCCcEEEEEEcCC------
Confidence 4577999999999999999963 3 599999999999999999999999999999999999999998741
Q ss_pred hhcccCCCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcc-hhhhhccCCCe
Q 021753 90 LLHSIKKIPTRVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNEN-LKDLLDEREKY 168 (308)
Q Consensus 90 ~~~~~~~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~-~~~~ld~~~df 168 (308)
..|++.|.++.+.+++.. +.+.+.|.+ +++. ...+ .+++
T Consensus 82 ---------~~v~v~G~a~~v~d~~~~---~~~~~~~~~-------------------------k~~~~~~~~---~~~~ 121 (155)
T 2iab_A 82 ---------DLVLVEGTALPLEPAGLP---DGVGDTFAE-------------------------KTGFDPRRL---TTSY 121 (155)
T ss_dssp ---------CEEEEEEEEEEECGGGCC---TTHHHHHHH-------------------------HHSCCGGGC---SSCE
T ss_pred ---------CEEEEEEEEEEecCchhH---HHHHHHHHH-------------------------HhCCCcccc---CCCE
Confidence 267899999999765421 123344444 3321 1111 3689
Q ss_pred EEEEEEEeEEEEEeCCCceeeechhhhc
Q 021753 169 VVYKFNISSCMYIDGHGGTHEVDLKDVQ 196 (308)
Q Consensus 169 ~~~rL~~~~~~lv~gfG~a~~v~~~d~~ 196 (308)
.+|+|+|+++.+-+ +..++....++
T Consensus 122 ~~~ri~p~~v~~w~---~~~~l~~r~~~ 146 (155)
T 2iab_A 122 LYFRISPRRVQAWR---EANELSGRELM 146 (155)
T ss_dssp EEEEEEEEEEEEES---SGGGSTTCEEE
T ss_pred EEEEEEEEEEEEec---CCCCcCcceEE
Confidence 99999999988655 35555554443
No 13
>3ec6_A General stress protein 26; alpha-beta structure, structural genomics of niaid; HET: FAD; 1.60A {Bacillus anthracis} SCOP: b.45.1.0
Probab=99.33 E-value=4.9e-11 Score=98.44 Aligned_cols=126 Identities=18% Similarity=0.239 Sum_probs=96.5
Q ss_pred CHHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEecCCeEEEEecCCchhhcccccCCCceEEEeCCCCCchhh
Q 021753 10 TLAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLKKGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPLAK 89 (308)
Q Consensus 10 s~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l~~ 89 (308)
...+.++.+|..+..++|+|++ +| .|+++.+.|..++|.+||.-+..+.+.+||..||+++|+|.... ++..
T Consensus 3 ~l~~~~~~~L~~~~~~~LaT~~---dg---~P~~~pv~~~~~~~~l~f~t~~~s~k~~~l~~np~v~l~v~~~~-d~~~- 74 (139)
T 3ec6_A 3 HLKEKITTIIQGQRTGVLSTVR---ND---KPHSAFMMFFHEDFVLYVATDRQSKKITDIENNPNVHVLLGREG-KKLD- 74 (139)
T ss_dssp CHHHHHHHHHHSCCEEEEEEEE---TT---EEEEEEEECEEETTEEEEEEETTCHHHHHHHHCCEEEEEECC----CTT-
T ss_pred hHHHHHHHHHhcCCEEEEEEec---CC---CEEEEEEEEEEeCCEEEEEECCCCHHHHHHHhCCcEEEEEEecC-CCCC-
Confidence 4568899999999999999985 25 89999999998899999999999999999999999999986421 1111
Q ss_pred hhcccCCCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchhhhhc--cCCC
Q 021753 90 LLHSIKKIPTRVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLKDLLD--EREK 167 (308)
Q Consensus 90 ~~~~~~~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~~~ld--~~~d 167 (308)
...+++.|+++.+.+.+. ++.+.. +.++.|.+ ..++
T Consensus 75 --------~~~v~v~G~a~~~~d~~~-------~~~~~~---------------------------~~~~~~~~~~~~~~ 112 (139)
T 3ec6_A 75 --------EDYIEVEGLASIEEDSTL-------KNKFWN---------------------------NSLKRWLLRPEDPN 112 (139)
T ss_dssp --------CCEEEEEEEEEEECCHHH-------HHHHCC---------------------------GGGGGTCSSTTCTT
T ss_pred --------ccEEEEEEEEEEEcCHHH-------HHHHHH---------------------------HHHHHHhCCCCCCC
Confidence 347999999999986542 233322 33344433 2678
Q ss_pred eEEEEEEEeEEEEEeCCC
Q 021753 168 YVVYKFNISSCMYIDGHG 185 (308)
Q Consensus 168 f~~~rL~~~~~~lv~gfG 185 (308)
+.++|++|+++.|.++.|
T Consensus 113 ~~~i~i~p~~~~~~d~~g 130 (139)
T 3ec6_A 113 YVLIKINPDTIYYIDGAG 130 (139)
T ss_dssp EEEEEEEEEEEEEEC---
T ss_pred EEEEEEEeeEEEEEcCCC
Confidence 999999999999999988
No 14
>3db0_A LIN2891 protein; putative pyridoxamine 5'-phosphate oxidase, STR genomics, joint center for structural genomics, JCSG; 2.00A {Listeria innocua}
Probab=99.29 E-value=7e-11 Score=95.80 Aligned_cols=122 Identities=11% Similarity=0.043 Sum_probs=88.9
Q ss_pred HHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEecCCeEEEEecCCchhhcccccCCCceEEEeCCCCCchhhh
Q 021753 11 LAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLKKGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPLAKL 90 (308)
Q Consensus 11 ~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l~~~ 90 (308)
..+.++.+|.....+.|+|++ +| .|+++.+.|+.++|.+||..+..+.+.+||..||+++|+|... + ..
T Consensus 6 ~~~~~~~~l~~~~~~~LaT~~---~g---~P~~~pv~~~~~~~~l~f~t~~~s~k~~~l~~np~v~l~v~~~-~--~~-- 74 (128)
T 3db0_A 6 LEDKILAILEQHQVGVLTSVQ---GD---FPHARYMTFLHDGLTLYTPSGKELPKTEEVRRNPHVCVLIGYD-S--PG-- 74 (128)
T ss_dssp HHHHHHHHHHTCCEEEEEEEE---TT---EEEEEEEECEEETTEEEEEC----CTTCCCCCCCEEEEEECCC-S--TT--
T ss_pred HHHHHHHHHhhCCEEEEEEec---CC---CEEEEEEEEEecCCEEEEEECCCCHHHHHHHhCCceEEEEEEc-C--CC--
Confidence 567899999999999999984 25 8999999999989999999999999999999999999998653 1 11
Q ss_pred hcccCCCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchhhhhccCCCeEE
Q 021753 91 LHSIKKIPTRVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLKDLLDEREKYVV 170 (308)
Q Consensus 91 ~~~~~~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~~~ld~~~df~~ 170 (308)
...+++.|+++.+.+.+.. +++.+.+.+ ++.. -.+ .+++.+
T Consensus 75 -------~~~v~v~G~a~~v~d~~~~---~~~~~~~~~-------------------------~~~~---~~~-~~~~~~ 115 (128)
T 3db0_A 75 -------SAFLEINGLASLEEDESIK---ERIWENISK-------------------------DWFQ---GED-SPSFVV 115 (128)
T ss_dssp -------CCEEEEEEEEEECCCHHHH---HHHHHHHCS-------------------------SCCC----------CCE
T ss_pred -------CcEEEEEEEEEEEcCHHHH---HHHHHHHHH-------------------------HhCC---CCC-CCCEEE
Confidence 4579999999999765432 223333332 2221 112 579999
Q ss_pred EEEEEeEEEEEe
Q 021753 171 YKFNISSCMYID 182 (308)
Q Consensus 171 ~rL~~~~~~lv~ 182 (308)
+||+|+++.|+.
T Consensus 116 ~ri~p~~~~~~~ 127 (128)
T 3db0_A 116 IKIVPEQIRILN 127 (128)
T ss_dssp EEEEEEEEEEEC
T ss_pred EEEEeEEEEEec
Confidence 999999999875
No 15
>2i02_A General stress protein of COG3871; pyridoxamine 5'-phosphate like family protein, structural genomics, joint center for structural genomics; HET: MSE FMN P33; 1.80A {Nostoc punctiforme} SCOP: b.45.1.1
Probab=99.29 E-value=1.8e-11 Score=101.76 Aligned_cols=126 Identities=15% Similarity=0.178 Sum_probs=95.1
Q ss_pred CHHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeee--Eec-CCeEEEEecCCchhhcccccCCCceEEEeCCCCCc
Q 021753 10 TLAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKY--MLK-KGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGP 86 (308)
Q Consensus 10 s~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y--~~d-~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~ 86 (308)
...+.++.+|..+..++|+|++. +|.|+++.+.| ..+ +|.+||+.+..+.+.+||..||+++|++.....
T Consensus 10 ~~~~~~~~~l~~~~~~~LaT~~~-----dG~P~~~pv~~~~~~~~~~~l~f~t~~~s~k~~~l~~np~v~l~~~~~~~-- 82 (148)
T 2i02_A 10 QEIQKLHELIKNIDYGMFTTVDD-----DGSLHSYPMSKSGDINSEATLWFFTYAGSHKVTEIEHHEQVNVSFSSPEQ-- 82 (148)
T ss_dssp HHHHHHHHHHTTCCEEEEEEECT-----TSCEEEEEEECBCC---CCEEEEEEETTSHHHHHHHHCCEEEEEEEETTT--
T ss_pred HHHHHHHHHHhcCCEEEEEEEcC-----CCCEEEEEeEeeEEEcCCCeEEEEEcCCCHHHHHHHhCCcEEEEEEcCCC--
Confidence 45678999999999999999963 35999999999 456 889999999999999999999999999987543
Q ss_pred hhhhhcccCCCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchhhhhccCC
Q 021753 87 LAKLLHSIKKIPTRVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLKDLLDERE 166 (308)
Q Consensus 87 l~~~~~~~~~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~~~ld~~~ 166 (308)
...|++.|+++.+++.+.. .+.+.. .- ...+|+. .+ .+
T Consensus 83 -----------~~~v~v~G~a~~v~d~~~~------~~~~~~-~~--------------------~~~~~~~---~~-~~ 120 (148)
T 2i02_A 83 -----------QRYVSISGTSQLVKDRNKM------RELWKP-EL--------------------QTWFPKG---LD-EP 120 (148)
T ss_dssp -----------TEEEEEEEEEEEECCHHHH------HHHCCG-GG--------------------GGTCTTG---GG-CT
T ss_pred -----------CeEEEEEEEEEEEcCHHHH------HHHHhH-HH--------------------HHHccCC---CC-CC
Confidence 3478999999999875431 122111 00 0022321 22 57
Q ss_pred CeEEEEEEEeEEEEEeCC
Q 021753 167 KYVVYKFNISSCMYIDGH 184 (308)
Q Consensus 167 df~~~rL~~~~~~lv~gf 184 (308)
+|.+|+|+|+++.|.++-
T Consensus 121 ~~~v~~i~~~~~~~~~~~ 138 (148)
T 2i02_A 121 DIALLKVNINQVNYWDST 138 (148)
T ss_dssp TEEEEEEEEEEEEEEEGG
T ss_pred CEEEEEEEeCEEEEEcCC
Confidence 899999999999999874
No 16
>3f7e_A Pyridoxamine 5'-phosphate oxidase-related, FMN- binding; F420 dependent reductase, unknown function; HET: MSE; 1.23A {Mycobacterium smegmatis}
Probab=99.24 E-value=3.7e-11 Score=98.09 Aligned_cols=122 Identities=10% Similarity=0.054 Sum_probs=92.5
Q ss_pred HHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEecCCeEEEEecCCchhhcccccCCCceEEEeCCCCCchhhhhc
Q 021753 13 EKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLKKGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPLAKLLH 92 (308)
Q Consensus 13 e~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l~~~~~ 92 (308)
+.++.+|.....+.|+|++. +|.|+.+.+.|+.++|..||.-+..+.|.+||..||+++|+|.+....
T Consensus 6 ~~~~~~l~~~~~~~LaT~~~-----dG~P~~~pv~~~~d~~~l~f~t~~~s~k~~~l~~np~v~l~v~~~~~~------- 73 (131)
T 3f7e_A 6 EGYESLLERPLYGHLATVRP-----DGTPQVNAMWFAWDGEVLRFTHTTKRQKYRNIKANPAVAMSVIDPDNP------- 73 (131)
T ss_dssp TTCHHHHHSCCCEEEEEECT-----TSCEEEEEECCEECSSCEEEEEETTSHHHHHHHHCCEEEEEEECSSCT-------
T ss_pred HHHHHHHhCCCcEEEEEECC-----CCCEEEEEEEEEEECCEEEEEECCCCHHHHHHhhCCcEEEEEEcCCCC-------
Confidence 45788999999999999863 359999999999998899999999999999999999999999985431
Q ss_pred ccCCCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchhhhhccCCCeEEEE
Q 021753 93 SIKKIPTRVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLKDLLDEREKYVVYK 172 (308)
Q Consensus 93 ~~~~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~~~ld~~~df~~~r 172 (308)
...|.+.|+++.+.+++.....+.+.+.|.. ... .+.+..++..++|
T Consensus 74 -----~~~v~v~G~a~~v~~~~~~~~~~~l~~ky~~-------------------------~~~---~~~~~~~~~~v~r 120 (131)
T 3f7e_A 74 -----YRYLEVRGLVEDIVPDPTGAFYLKLNDRYDG-------------------------PLT---EPPADKADRVIIV 120 (131)
T ss_dssp -----TCEEEEEEEEEEEEECTTCHHHHHHHHHTTC-------------------------SCC---SCCTTGGGEEEEE
T ss_pred -----eeEEEEEEEEEEeccCccHHHHHHHHHHhCC-------------------------ccc---CCCCCCCCEEEEE
Confidence 3489999999988754333333445555542 111 1112256789999
Q ss_pred EEEeEEE
Q 021753 173 FNISSCM 179 (308)
Q Consensus 173 L~~~~~~ 179 (308)
++|+++.
T Consensus 121 i~~~~~~ 127 (131)
T 3f7e_A 121 VRPTAFS 127 (131)
T ss_dssp EEEEEEE
T ss_pred EEeEEEE
Confidence 9999874
No 17
>2asf_A Hypothetical protein RV2074; H37RV, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: CIT; 1.60A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=99.23 E-value=1.2e-10 Score=95.90 Aligned_cols=122 Identities=14% Similarity=0.067 Sum_probs=96.9
Q ss_pred HHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEec-C-CeEEEEecCCchhhcccccCCCceEEEeCCCCCchhh
Q 021753 12 AEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLK-K-GKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPLAK 89 (308)
Q Consensus 12 ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d-~-G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l~~ 89 (308)
.+.++.+|+.+..++|+|++. +|.|+.+.+.|+.+ + |.+||..+..+.|.+||..||+++|++.+.
T Consensus 11 ~~~~~~~L~~~~~~~LaT~~~-----dG~P~~~pv~~~~~~~~~~l~f~t~~~s~k~~~l~~np~V~l~~~~~------- 78 (137)
T 2asf_A 11 SDDALAFLSERHLAMLTTLRA-----DNSPHVVAVGFTFDPKTHIARVITTGGSQKAVNADRSGLAVLSQVDG------- 78 (137)
T ss_dssp CHHHHHHTTSSCCEEEEEECT-----TSCEEEEEECCEEETTTTEEEEEEETTCHHHHHHHHHCEEEEEEEET-------
T ss_pred cHHHHHHHhCCCeEEEEEECC-----CCCEEEEEEEEEEECCCCEEEEEeCCCCHHHHHHhhCCeEEEEEECC-------
Confidence 467899999999999999863 34999999999988 3 899999999999999999999999998752
Q ss_pred hhcccCCCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchhhhhccCCCeE
Q 021753 90 LLHSIKKIPTRVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLKDLLDEREKYV 169 (308)
Q Consensus 90 ~~~~~~~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~~~ld~~~df~ 169 (308)
...+++.|+++.+.+.+.. +.+.+.|.. ++|.. .. .+++.
T Consensus 79 --------~~~v~v~G~a~~~~d~~~~---~~~~~~~~~-------------------------~~~~~---~~-~~~~~ 118 (137)
T 2asf_A 79 --------ARWLSLEGRAAVNSDIDAV---RDAELRYAQ-------------------------RYRTP---RP-NPRRV 118 (137)
T ss_dssp --------TEEEEEEEEEEEECCHHHH---HHHHHHHHH-------------------------HSCCC---CC-CTTEE
T ss_pred --------CCEEEEEEEEEEecCHHHH---HHHHHHHHH-------------------------hcCcc---cC-CCCEE
Confidence 2378899999999865432 345566665 55531 12 67899
Q ss_pred EEEEEEeEEEEEeCCC
Q 021753 170 VYKFNISSCMYIDGHG 185 (308)
Q Consensus 170 ~~rL~~~~~~lv~gfG 185 (308)
+|+|+|+++.-..+.+
T Consensus 119 viri~~~~v~g~~~~~ 134 (137)
T 2asf_A 119 VIEVQIERVLGSADLL 134 (137)
T ss_dssp EEEEEEEEEEECTTTC
T ss_pred EEEEEEEEEEEecccc
Confidence 9999999998655433
No 18
>2re7_A Uncharacterized protein; general stress protein COG3871, structural genomics, joint C structural genomics, JCSG; 2.50A {Psychrobacter arcticus}
Probab=99.21 E-value=3.6e-10 Score=92.13 Aligned_cols=125 Identities=12% Similarity=-0.012 Sum_probs=94.7
Q ss_pred CHHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEec---CCeEEEEecCCchhhcccccCCCceEEEeCCCCCc
Q 021753 10 TLAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLK---KGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGP 86 (308)
Q Consensus 10 s~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d---~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~ 86 (308)
...+.++.+|..+..++|+|++. +|.|+++.+.|... +|.++|.-+..+.+.+||..||+++|.+..+..
T Consensus 6 ~~~~~~~~~l~~~~~~~LaT~~~-----dG~P~~~pv~~~~~~~~~~~l~f~t~~~s~K~~~l~~np~v~l~~~~~~~-- 78 (134)
T 2re7_A 6 KHIDKIQAVIKDVKFAMISTSNK-----KGDIHAWPMTTSEVNLDNKEIWFIGDKTSDVVKDIQDDARIGLTYATQDE-- 78 (134)
T ss_dssp CCHHHHHHHHHHCSCEEEEEECT-----TSCEEEEEECCSEEETTTTEEEEEEETTSHHHHHHHHCCEEEEEEECTTS--
T ss_pred HHHHHHHHHHhcCCEEEEEEEcC-----CCCEEEEecEeeeecCCCceEEEEECCCCHHHHHHhhCCcEEEEEEcCCC--
Confidence 35788999999999999999863 35999999988643 788999999999999999999999999987542
Q ss_pred hhhhhcccCCCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchhhhhccCC
Q 021753 87 LAKLLHSIKKIPTRVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLKDLLDERE 166 (308)
Q Consensus 87 l~~~~~~~~~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~~~ld~~~ 166 (308)
...+++.|+++.+.+.+.. +.+.+.+.. . .+|+. .+ .+
T Consensus 79 -----------~~~v~v~G~a~~~~d~~~~---~~~~~~~~~---~---------------------~~~~~---~~-~~ 116 (134)
T 2re7_A 79 -----------KNYVSISGDAELPTDKAKL---DELWSPVYS---A---------------------FFANG---KE-DA 116 (134)
T ss_dssp -----------SCEEEEEEEEECCCCHHHH---HHHCCHHHH---H---------------------TSTTG---GG-CT
T ss_pred -----------CeEEEEEEEEEEECCHHHH---HHHhhHHHH---H---------------------HccCC---CC-CC
Confidence 3368889999999875432 111111111 0 23321 12 57
Q ss_pred CeEEEEEEEeEEEEEeC
Q 021753 167 KYVVYKFNISSCMYIDG 183 (308)
Q Consensus 167 df~~~rL~~~~~~lv~g 183 (308)
++.+|+++|+++.|.+|
T Consensus 117 ~~~~~~i~~~~~~~w~~ 133 (134)
T 2re7_A 117 NIQLIKVVPHGVECWLS 133 (134)
T ss_dssp TEEEEEEEEEEEEEECC
T ss_pred CEEEEEEEeCEEEEecC
Confidence 89999999999999875
No 19
>2fhq_A Putative general stress protein; alpha-beta structure, structural genomics, PSI, protein STRU initiative; HET: MSE; 1.87A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1
Probab=99.20 E-value=1.9e-10 Score=94.33 Aligned_cols=124 Identities=14% Similarity=0.174 Sum_probs=95.6
Q ss_pred HHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEec-C-CeEEEEecCCchhhcccccCCCceEEEeCCCCCchh
Q 021753 11 LAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLK-K-GKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPLA 88 (308)
Q Consensus 11 ~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d-~-G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l~ 88 (308)
..+.++.+|.....++|+|.+. +|.|+++.+.|+.+ + |..||..+..+.|.+||..||+++|+|..+.
T Consensus 9 ~~~~~~~~l~~~~~~~LaT~~~-----~G~P~~~pv~~~~~~~~~~l~f~t~~~s~k~~~l~~np~v~l~~~~~~----- 78 (141)
T 2fhq_A 9 MKEKAVELLQKCEVVTLASVNK-----EGYPRPVPMSKIAAEGISTIWMSTGADSLKTIDFLSNPKAGLCFQEKG----- 78 (141)
T ss_dssp HHHHHHHHHHTCSEEEEEEECT-----TSCEEEEEEECCEEETTTEEEEEEETTSHHHHHHHHCCEEEEEEEETT-----
T ss_pred HHHHHHHHHhcCCEEEEEEECC-----CCCEEEEeeEEEEeCCCCeEEEEeCCCCHHHHHHHhCCcEEEEEEeCC-----
Confidence 4678999999999999999863 34999999999875 3 8999999999999999999999999998743
Q ss_pred hhhcccCCCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchhhhhccCCCe
Q 021753 89 KLLHSIKKIPTRVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLKDLLDEREKY 168 (308)
Q Consensus 89 ~~~~~~~~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~~~ld~~~df 168 (308)
..|++.|+++.+.+++.. +++.+.+.. .++|.. .+ .+++
T Consensus 79 ----------~~v~v~G~a~~v~d~~~~---~~~~~~~~~------------------------~~~p~~---~~-~~~~ 117 (141)
T 2fhq_A 79 ----------DSVALMGEVEVVTDEKLK---QELWQDWFI------------------------EHFPGG---PT-DPGY 117 (141)
T ss_dssp ----------EEEEEEEEEEEECCHHHH---HHSCCGGGG------------------------GTCTTC---TT-CTTE
T ss_pred ----------CEEEEEEEEEEECCHHHH---HHHHHHHHH------------------------HHcCCC---CC-CCCE
Confidence 278999999999875331 111111111 033321 22 5689
Q ss_pred EEEEEEEeEEEEEeCCCc
Q 021753 169 VVYKFNISSCMYIDGHGG 186 (308)
Q Consensus 169 ~~~rL~~~~~~lv~gfG~ 186 (308)
.+|+|+|+++.+.++ |+
T Consensus 118 ~~~~i~p~~~~~~~~-~~ 134 (141)
T 2fhq_A 118 VLLKFTANHATYWIE-GT 134 (141)
T ss_dssp EEEEEEEEEEEEEET-TE
T ss_pred EEEEEEcCEEEEeeC-Cc
Confidence 999999999999998 53
No 20
>2hhz_A Pyridoxamine 5'-phosphate oxidase-related; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.00A {Streptococcus suis}
Probab=99.13 E-value=1.3e-09 Score=91.05 Aligned_cols=126 Identities=14% Similarity=0.170 Sum_probs=97.2
Q ss_pred HHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEec-CCeEEEEecCCchhhcccccCCCceEEEeCCCCCchhhh
Q 021753 12 AEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLK-KGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPLAKL 90 (308)
Q Consensus 12 ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d-~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l~~~ 90 (308)
.+.++.+|..+..+.|||++. +|.|+++.+.|... +|..||.-+..+.+.+||..||+++|++...... .
T Consensus 4 ~~~~~~~l~~~~~~~LaTv~~-----dG~P~~~p~~~~~~~~~~l~f~t~~~s~k~~~l~~np~V~l~~~~~~~~-~--- 74 (150)
T 2hhz_A 4 LKDIMHILEDMKVGVFATLDE-----YGNPHARHAHITAANEEGIFFMTSPETHFYDQLMGDQRVAMTAISEEGY-L--- 74 (150)
T ss_dssp HHHHHHHHHHTCEEEEEEECT-----TCCEEEEEEEEEEEETTEEEEEECTTSHHHHHHHHCCEEEEEEEECSTT-C---
T ss_pred HHHHHHHHhcCCeEEEEEECC-----CCCEEEEEEEEEEEcCCEEEEEecCCCHHHHHHhhCCeEEEEEEcCCcc-e---
Confidence 467889999999999999863 34999999999875 7889999999999999999999999999874321 0
Q ss_pred hcccCCCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchhhhhc--cCCCe
Q 021753 91 LHSIKKIPTRVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLKDLLD--EREKY 168 (308)
Q Consensus 91 ~~~~~~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~~~ld--~~~df 168 (308)
...|.+.|+++.+.+++ ++ .+++ ++|.++.|.. ..+++
T Consensus 75 -------~~~v~i~G~a~~v~d~~-------~~-~~~~-------------------------~~p~~~~~~~~~~~~~~ 114 (150)
T 2hhz_A 75 -------IQVVRVEGTARPVENDY-------LK-TVFA-------------------------DNPYYQHIYKDESSDTM 114 (150)
T ss_dssp -------CEEEEEEEEEEEECHHH-------HH-HHHT-------------------------TCGGGGGGCC-----CC
T ss_pred -------eEEEEEEEEEEECCcHH-------HH-HHHH-------------------------hChhhhhcccCCCCCcE
Confidence 14799999999998653 22 4444 4455555542 25789
Q ss_pred EEEEEEEeEEEEEeCCCc
Q 021753 169 VVYKFNISSCMYIDGHGG 186 (308)
Q Consensus 169 ~~~rL~~~~~~lv~gfG~ 186 (308)
.+|+|+|.++.|.+.-++
T Consensus 115 ~v~~i~~~~~~~~d~~~~ 132 (150)
T 2hhz_A 115 QVFQIYAGHGFYHSLTQG 132 (150)
T ss_dssp EEEEEEEEEEEEEEGGGT
T ss_pred EEEEEEccEEEEEECCCC
Confidence 999999999999886553
No 21
>2aq6_A Pyridoxine 5'-phosphate oxidase; pyridoxal 5'-phosphate, STR genomics, PSI, protein structure initiative, TB structural consortium; HET: PLP; 1.70A {Mycobacterium tuberculosis} SCOP: b.45.1.1 PDB: 1xxo_A 1y30_A* 1w9a_A*
Probab=99.08 E-value=2e-09 Score=88.83 Aligned_cols=132 Identities=17% Similarity=0.153 Sum_probs=94.9
Q ss_pred HHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEecCC--eEEEEecCCchhhcccccCCCceEEEeCCCCCchh
Q 021753 11 LAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLKKG--KPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPLA 88 (308)
Q Consensus 11 ~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d~G--~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l~ 88 (308)
..+.++.+|+.+..++|+|.+. +|.|+.+.+.|+.+++ ..||.-+..+.+.+||..||+++|+|..+..
T Consensus 6 ~~~~~~~~l~~~~~~~LaT~~~-----~G~P~~~pv~~~~~~~~~~l~~~t~~~~~k~~~l~~np~v~l~~~~~~~---- 76 (147)
T 2aq6_A 6 FDDKLLAVISGNSIGVLATIKH-----DGRPQLSNVQYHFDPRKLLIQVSIAEPRAKTRNLRRDPRASILVDADDG---- 76 (147)
T ss_dssp HHHHHHHHHHTCSEEEEEEECT-----TSCEEEEEEECEEETTTTEEEEEEETTSHHHHHHHHCCEEEEEEECTTS----
T ss_pred ChHHHHHHHhcCCeEEEEEECC-----CCCEEEEEEEEEEcCCCCEEEEEecCCCHHHHHHhhCCcEEEEEEcCCC----
Confidence 4577999999999999999863 3489999999999844 6777777788999999999999999987432
Q ss_pred hhhcccCCCCcEEEEEEEEEEcCch--hHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchhhhhcc--
Q 021753 89 KLLHSIKKIPTRVALSGDIAPLKSE--KAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLKDLLDE-- 164 (308)
Q Consensus 89 ~~~~~~~~~~~Rvtl~G~~~~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~~~ld~-- 164 (308)
...|++.|+++.+.+. +.....+.+.+.|..... +++....+.+.
T Consensus 77 ---------~~~v~v~G~a~~~~d~~~~~~~~~~~l~~~~~~~~~----------------------~~~~~~~~~~~~~ 125 (147)
T 2aq6_A 77 ---------WSYAVAEGTAQLTPPAAAPDDDTVEALIALYRNIAG----------------------EHSDWDDYRQAMV 125 (147)
T ss_dssp ---------SCEEEEEEECEECCCCCSTTSHHHHHHHHHHHHHTC----------------------SCSCHHHHHHHHH
T ss_pred ---------cEEEEEEEEEEEcCCCCCccHHHHHHHHHHHHhccC----------------------CCCchhHHHHhcc
Confidence 2369999999999874 222223445555542000 12222233321
Q ss_pred CCCeEEEEEEEeEEEEEe
Q 021753 165 REKYVVYKFNISSCMYID 182 (308)
Q Consensus 165 ~~df~~~rL~~~~~~lv~ 182 (308)
.....+++|+|+++..-+
T Consensus 126 ~~~~~~i~i~~~~i~~~~ 143 (147)
T 2aq6_A 126 TDRRVLLTLPISHVYGLP 143 (147)
T ss_dssp HTTEEEEEEECCEEEEEC
T ss_pred cCceEEEEEEEEEEEccc
Confidence 268899999999998765
No 22
>2ig6_A NIMC/NIMA family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: FMN; 1.80A {Clostridium acetobutylicum}
Probab=99.06 E-value=4.8e-09 Score=88.28 Aligned_cols=124 Identities=15% Similarity=0.119 Sum_probs=99.4
Q ss_pred HHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEe-cCCeEEEEecCCchhhcccccCCCceEEEeCCCCCchhh
Q 021753 11 LAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYML-KKGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPLAK 89 (308)
Q Consensus 11 ~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~-d~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l~~ 89 (308)
..+.++.+|..+..++|||++ +| .|++..+.|.. ++|..||.-+..+.+.+||..||+++|++..+.
T Consensus 19 ~~~~~~~~l~~~~~~~LaTv~---dG---~P~~rpv~~~~~~~~~l~f~t~~~s~K~~~l~~np~V~l~~~~~~------ 86 (150)
T 2ig6_A 19 GMKRALEFLKECGVFYLATNE---GD---QPRVRPFGAVFEYEGKLYIVSNNTKKCFKQMIQNPKVEISGMNKK------ 86 (150)
T ss_dssp HHHHHHHHHHHHCSEEEEEEE---TT---EEEEEEECCCEEETTEEEEEEETTSHHHHHHHHCCEEEEEEECTT------
T ss_pred CHHHHHHHHHhCCeEEEEEcc---CC---ceEEEEeEEEEEcCCEEEEEeCCCcHHHHHHHHCCCEEEEEEcCC------
Confidence 457789999999999999985 25 89999999975 488999999999999999999999999998643
Q ss_pred hhcccCCCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchhhhhc-cCCCe
Q 021753 90 LLHSIKKIPTRVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLKDLLD-EREKY 168 (308)
Q Consensus 90 ~~~~~~~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~~~ld-~~~df 168 (308)
...|.+.|+++.+.+.+. ++.++. .+|.+..|.. ..+++
T Consensus 87 --------~~~v~i~G~a~~v~d~e~-------~~~~~~-------------------------~~p~~~~~~~~~dp~~ 126 (150)
T 2ig6_A 87 --------GQWIRLTGEVANDDRREV-------KELALE-------------------------AVPSLKNMYSVDDGIF 126 (150)
T ss_dssp --------SCEEEEEEEEEECCCHHH-------HHHHHH-------------------------HSGGGGGTCCTTSSCE
T ss_pred --------CeEEEEEEEEEEECCHHH-------HHHHHH-------------------------hChHHHHhhcCCCCcE
Confidence 136899999999987643 233443 3355554432 37899
Q ss_pred EEEEEEEeEEEEEeCCCc
Q 021753 169 VVYKFNISSCMYIDGHGG 186 (308)
Q Consensus 169 ~~~rL~~~~~~lv~gfG~ 186 (308)
.+|+|++.++.|-+.-|.
T Consensus 127 ~l~~v~~~~a~~wd~~~~ 144 (150)
T 2ig6_A 127 AVLYFTKGEGTICSFKGE 144 (150)
T ss_dssp EEEEEEEEEEEEECSSSC
T ss_pred EEEEEECCEEEEEeCCCC
Confidence 999999999999987664
No 23
>3dmb_A Putative general stress protein 26 with A PNP-OXI fold; PNP-oxidase like fold, structural genomics; HET: MSE; 2.30A {Xanthomonas campestris PV}
Probab=98.91 E-value=2.5e-08 Score=83.45 Aligned_cols=126 Identities=11% Similarity=0.025 Sum_probs=94.3
Q ss_pred HHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEec---CCeEEEEecCCchhhcccccCCCceEEEeCCCCCch
Q 021753 11 LAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLK---KGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPL 87 (308)
Q Consensus 11 ~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d---~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l 87 (308)
..+.++.+|..++.|+|+|++. + .|+.+.+.|..+ +|..+|+-+..+...+||..||+++|.+..+..
T Consensus 8 l~~~~~~~l~~~~~~~LaT~~~-----d-~~~~~pm~~~~~~d~~g~l~F~T~~~s~K~~~l~~np~v~l~~~~~~~--- 78 (147)
T 3dmb_A 8 LQDKFWKALKSDRTVMLGLDGV-----E-DGHARPMTAQIEGDSGGPIWFFTSKDNALIAMLGQGRRVIGAFSSKGH--- 78 (147)
T ss_dssp HHHHHHHHHHHHCEEEEEETTS-----S-SCCCEEEEEECSSSSCCCEEEEECTTCTTHHHHTTCEEEEEEEECTTS---
T ss_pred HHHHHHHHHhcCCEEEEEEEcC-----C-CCceEeCccccccCCCceEEEEecCCcHHHHHHhhCCeEEEEEEcCCC---
Confidence 4578899999999999999853 2 378888888764 488999999999999999999999999987543
Q ss_pred hhhhcccCCCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchhhhhccCCC
Q 021753 88 AKLLHSIKKIPTRVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLKDLLDEREK 167 (308)
Q Consensus 88 ~~~~~~~~~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~~~ld~~~d 167 (308)
..-|++.|+++.+.+.+.. +.+...+.. + .+|.- .+ .++
T Consensus 79 ----------~~~v~v~G~a~~~~d~~~~---~~~~~~~~~---~---------------------~~~~g---~~-dp~ 117 (147)
T 3dmb_A 79 ----------DLFASISGSLREDTDPAVV---DRLWNPYVA---A---------------------WYEGG---KD-DPK 117 (147)
T ss_dssp ----------SEEEEEEEEEEECCCHHHH---HHHCCHHHH---H---------------------HCTTG---GG-CTT
T ss_pred ----------CeEEEEEEEEEEecCHHHH---HHHhhHHHH---H---------------------HccCC---CC-CCC
Confidence 2368899999999875432 111111211 0 12221 23 789
Q ss_pred eEEEEEEEeEEEEEeCCCc
Q 021753 168 YVVYKFNISSCMYIDGHGG 186 (308)
Q Consensus 168 f~~~rL~~~~~~lv~gfG~ 186 (308)
+.+|+++|+++.|-++-|.
T Consensus 118 ~~vl~v~p~~~e~W~~~~~ 136 (147)
T 3dmb_A 118 LALLRLDADHAQIWLNGSS 136 (147)
T ss_dssp CEEEEEEEEEEEEEECCCC
T ss_pred EEEEEEEcCEEEEEECCCC
Confidence 9999999999999988764
No 24
>2hti_A BH0577 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, FMN-binding protein; HET: FAD; 2.50A {Bacillus halodurans} SCOP: b.45.1.1
Probab=98.87 E-value=4.4e-08 Score=84.71 Aligned_cols=98 Identities=11% Similarity=0.103 Sum_probs=77.1
Q ss_pred CCCCHHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEecCCeEEEEecCCchhhcccccCCCceEEEeCC----
Q 021753 7 TVLTLAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLKKGKPFIWVPEKDMHNVNTIIDERGSFAVASP---- 82 (308)
Q Consensus 7 ~~~s~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~---- 82 (308)
-.++..|.++.+|..+..|+|+|.. +| .|+++.+.|+.++|..||..+....+.+||..||++++.|...
T Consensus 10 ~~~~d~e~i~~~L~~~~~~~Lat~~---~g---~P~~~Pv~f~~~~~~ly~hta~~~~k~~~l~~np~V~~~v~~~~~~~ 83 (185)
T 2hti_A 10 RECKDEKKITEFLNKARTGFLGLST---ND---QPYVIPLNFVWHNHAIYFHGASEGRKIKMIEANPEVCFTICEDLGTI 83 (185)
T ss_dssp -CCCCHHHHHHHHHHCCCEEEEEEE---TT---EEEEEEECCEEETTEEEEEEESSSHHHHHHHHCCEEEEEEEECC---
T ss_pred ccCCCHHHHHHHHhcCCEEEEEEee---CC---EEEEEEEEEEEECCEEEEEeCCcCHHHHHhhcCCeEEEEEEeccccc
Confidence 3478888899999999999999986 24 8999999999999999999999899999999999999999886
Q ss_pred CCCchhhhhcccCCCCcEEEEEEEEEEcCchh
Q 021753 83 TPGPLAKLLHSIKKIPTRVALSGDIAPLKSEK 114 (308)
Q Consensus 83 ~~~~l~~~~~~~~~~~~Rvtl~G~~~~v~~~~ 114 (308)
......++ .+.-.-|.+.|+++.+.+.+
T Consensus 84 ~~~v~~~~----t~~y~sV~v~G~a~~v~d~~ 111 (185)
T 2hti_A 84 VSPVPAHT----DTAYMSVIIFGTIEPVSAIE 111 (185)
T ss_dssp --------------CEEEEEEEEEEEECCCHH
T ss_pred cccccccC----cceEEEEEEEEEEEEECCHH
Confidence 32100000 01124699999999998753
No 25
>2fg9_A 5-nitroimidazole antibiotic resistance protein; STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: FAD; 2.20A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1
Probab=98.86 E-value=2.7e-08 Score=85.83 Aligned_cols=100 Identities=3% Similarity=-0.048 Sum_probs=76.8
Q ss_pred CCHHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEecCCeEEEEecCCchhhcccccCCCceEEEeCCCCCc--
Q 021753 9 LTLAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLKKGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGP-- 86 (308)
Q Consensus 9 ~s~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~-- 86 (308)
.+..+.++.+|..+..|+|+|... +|.|+++.+.|+.++|..||..+....+.+||..||++++.|.......
T Consensus 25 ~~d~~ei~~~L~~~~~~~Lat~~~-----dg~P~v~Pv~f~~~~~~lyfhta~~~~k~~~l~~np~V~~~v~~~~~~is~ 99 (178)
T 2fg9_A 25 IEDKQRIESIILQADACFVGITDL-----EGNPYVVPMNFGYENDTLYLHSGPEGGKIEMLQRNNNVCITFSLGHKLVYQ 99 (178)
T ss_dssp ECCHHHHHHHHHHCSCEEEEEECT-----TSCEEEEEECCEEETTEEEEEECSCSHHHHHHHHCCEEEEEEECCCEEEEE
T ss_pred CCCHHHHHHHHHhCCEEEEEEECC-----CCcEEEEEEEEEEECCEEEEEcCCcchHHHHhhcCCcEEEEEEeCCceeec
Confidence 466688999999999999999862 3489999999999989999999888999999999999999998754310
Q ss_pred hh-hhhcccCCCCcEEEEEEEEEEcCchh
Q 021753 87 LA-KLLHSIKKIPTRVALSGDIAPLKSEK 114 (308)
Q Consensus 87 l~-~~~~~~~~~~~Rvtl~G~~~~v~~~~ 114 (308)
.. ....+ .+.-.-|.+.|+++.+.+.+
T Consensus 100 ~~~~~~~~-t~~y~sV~v~G~a~~v~d~~ 127 (178)
T 2fg9_A 100 HKQVACSY-SMRSESAMCRGKVEFIEDME 127 (178)
T ss_dssp C----CEE-EEEEEEEEEEEECEEECSHH
T ss_pred cCCCCCCC-cccEEEEEEEEEEEEECCHH
Confidence 00 00000 01123589999999998754
No 26
>3u5w_A Putative uncharacterized protein; ssgcid, seattle structural genomics center for infectious DI FMN-binding protein; 2.05A {Brucella melitensis biovar abortus} SCOP: b.45.1.0 PDB: 3u0i_A
Probab=98.85 E-value=3.7e-08 Score=82.58 Aligned_cols=87 Identities=8% Similarity=0.111 Sum_probs=71.7
Q ss_pred HHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEecCCeEEEEecCCchhhcccccCCCceEEEeCCCCCchhhhh
Q 021753 12 AEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLKKGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPLAKLL 91 (308)
Q Consensus 12 ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l~~~~ 91 (308)
.+.++.+|..+..|+|+|.. +| .|+.+.+.|+.++|..||... ...+..||..||+++|.|....+. ..
T Consensus 12 ~~e~~~lL~~~~~~~Lat~~---dg---~P~~~Pv~~~~~~~~ly~~~~-~g~K~~~l~~np~V~~~v~~~~~~-~~--- 80 (148)
T 3u5w_A 12 DYDIREMIQHKHVGRLGYVV---DD---RPIIVPMTFRFSGGSFYSFTT-DGQKTNAMRKNDAICILFDQIESQ-TK--- 80 (148)
T ss_dssp HHHHHHHHHHCCEEEEEEEE---TT---EEEEEEEECEEETTEEEEEEC-CHHHHHHHHHCCEEEEEEEEESSS-SS---
T ss_pred HHHHHHHHhcCCEEEEEEcc---CC---cEEEEEEEEEEECCEEEEEEC-CchhHHHHhcCCcEEEEEEecCCC-Cc---
Confidence 45689999999999999984 35 999999999999999888875 468889999999999999875431 11
Q ss_pred cccCCCCcEEEEEEEEEEcCchhH
Q 021753 92 HSIKKIPTRVALSGDIAPLKSEKA 115 (308)
Q Consensus 92 ~~~~~~~~Rvtl~G~~~~v~~~~~ 115 (308)
-..|++.|+++.+.+++.
T Consensus 81 ------y~sV~v~G~a~~v~d~~e 98 (148)
T 3u5w_A 81 ------WRTVLVQGRYREIAREDE 98 (148)
T ss_dssp ------EEEEEEEEEEEECCGGGH
T ss_pred ------EEEEEEEEEEEEeCCHHH
Confidence 237999999999987544
No 27
>2hq9_A MLL6688 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: FAD; 1.95A {Mesorhizobium loti} SCOP: b.45.1.1
Probab=98.84 E-value=4.9e-08 Score=81.18 Aligned_cols=88 Identities=22% Similarity=0.270 Sum_probs=72.4
Q ss_pred CCHHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEecCCeEEEEecCCchhhcccccCCCceEEEeCCCCCchh
Q 021753 9 LTLAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLKKGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPLA 88 (308)
Q Consensus 9 ~s~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l~ 88 (308)
++. +.++.+|..+..|+|+|.. +| .|+.+.+.|+.++|..||. +....+.+||..||+++|.|....+. ..
T Consensus 7 ~~~-~~~~~~L~~~~~~~Lat~~---~g---~P~~~pv~~~~~~~~l~~~-t~~~~k~~~l~~~p~V~~~v~~~~~~-~~ 77 (149)
T 2hq9_A 7 LSA-LECTKVLTANRVGRLACAK---DG---QPYVVPLYYAYSDAHLYAF-SMPGKKIEWMRANPRVSVQVDEHGQG-RG 77 (149)
T ss_dssp CCH-HHHHHHHHHCCEEEEEEEE---TT---EEEEEEEECEEETTEEEEE-ECSSHHHHHHHHCCEEEEEEEEECST-TC
T ss_pred cCH-HHHHHHHHhCCEEEEEEcc---CC---eEEEEEEEEEEECCEEEEE-eCccHHHHHHhcCCcEEEEEEecCCC-Cc
Confidence 344 6699999999999999985 34 8999999999998998888 56679999999999999999875431 11
Q ss_pred hhhcccCCCCcEEEEEEEEEEcCchh
Q 021753 89 KLLHSIKKIPTRVALSGDIAPLKSEK 114 (308)
Q Consensus 89 ~~~~~~~~~~~Rvtl~G~~~~v~~~~ 114 (308)
-..|.+.|+++.+++++
T Consensus 78 ---------y~sV~v~G~a~~v~d~~ 94 (149)
T 2hq9_A 78 ---------WKSVVVDGRYEELPDLI 94 (149)
T ss_dssp ---------EEEEEEEEEEEECCSCG
T ss_pred ---------EEEEEEEEEEEEEcCcc
Confidence 23699999999998754
No 28
>2htd_A Predicted flavin-nucleotide-binding protein from family structurally related to pyridoxine...; putative pyridoxamine 5'-phosphate oxidase; HET: MSE; 1.60A {Lactobacillus delbrueckii subsp}
Probab=98.80 E-value=6e-08 Score=80.48 Aligned_cols=85 Identities=15% Similarity=0.048 Sum_probs=71.9
Q ss_pred HHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeE--ecCCeEEEEecCCchhhcccccCCCceEEEeCCCCCchh
Q 021753 11 LAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYM--LKKGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPLA 88 (308)
Q Consensus 11 ~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~--~d~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l~ 88 (308)
.-+.++.+++. ..+.|+|++. +|.|+++.+.|+ .++|..+|.......+.+||..||+++|++.++..
T Consensus 28 l~~~~~~~l~~-~~~~LATv~~-----dG~P~~~p~~f~~~~d~~~l~f~~~~~~~k~~nL~~np~V~l~~~~~~~---- 97 (140)
T 2htd_A 28 LTEEQVNLFKN-NLVYLATVDA-----DGNPQVGPKGSMTVLDPSHLQYLEKTKGEAYENIKRGSKVALVAADVPS---- 97 (140)
T ss_dssp CCHHHHHHHHH-SCEEEEEECT-----TCCEEEEEETTCEEEETTEEEEEESSCCHHHHHHHTTCCEEEEEEETTT----
T ss_pred CCHHHHHHHhC-CCEEEEEECC-----CCCEEEecceeEEecCCCEEEEeccCCchHHHHhhcCCeEEEEEEecCC----
Confidence 34678899999 8999999963 359999998884 46899999888888999999999999999998644
Q ss_pred hhhcccCCCCcEEEEEEEEEEcCchh
Q 021753 89 KLLHSIKKIPTRVALSGDIAPLKSEK 114 (308)
Q Consensus 89 ~~~~~~~~~~~Rvtl~G~~~~v~~~~ 114 (308)
..++.+.|+++.+.+++
T Consensus 98 ---------~~~v~i~G~a~~v~d~~ 114 (140)
T 2htd_A 98 ---------HTAVRVLATAEVHEDDD 114 (140)
T ss_dssp ---------TEEEEEEEEEEEESSSH
T ss_pred ---------CCEEEEEEEEEEecChH
Confidence 34899999999998754
No 29
>3u35_A General stress protein; PNP-oxidase like fold, FMN/FAD, protein BI; HET: PGE; 2.50A {Xanthomonas axonopodis PV} PDB: 3u34_A*
Probab=98.77 E-value=4.3e-08 Score=85.43 Aligned_cols=127 Identities=10% Similarity=0.011 Sum_probs=95.8
Q ss_pred CHHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEec---CCeEEEEecCCchhhcccccCCCceEEEeCCCCCc
Q 021753 10 TLAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLK---KGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGP 86 (308)
Q Consensus 10 s~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d---~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~ 86 (308)
...+.+..+|..++.|+|+|++. + .|+...+.|..+ +|..+|+-+..+...+||..||+++|.+..+..
T Consensus 26 el~e~i~~~L~~~~~~~LaTv~~-----d-gp~~rpm~~~~d~d~~g~l~F~T~~~s~K~~~l~~np~v~l~~~~~~~-- 97 (182)
T 3u35_A 26 ELQEKFWKALKSDRTVMLGLDGV-----E-DGHARPMTAQIEGDSGGPIWFFTSKDNALIAMLGQGRRVIGAFSSKGH-- 97 (182)
T ss_dssp HHHHHHHHHHHHHCEEEECCTTS-----G-GGCCEEEECBCSSSSCSCEEEEEETTCGGGGGCTTCEEEEEEEECTTS--
T ss_pred HHHHHHHHHHccCCEEEEEEecC-----C-CCcEEEEEEEEeecCCCEEEEEECCCCHHHHHHHHCCcEEEEEECCCC--
Confidence 45778999999999999999853 2 378888877764 488999999999999999999999999987543
Q ss_pred hhhhhcccCCCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchhhhhccCC
Q 021753 87 LAKLLHSIKKIPTRVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLKDLLDERE 166 (308)
Q Consensus 87 l~~~~~~~~~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~~~ld~~~ 166 (308)
..-|+|.|.++.+.+.+.. +.+...+.. + .+|.- .+ .+
T Consensus 98 -----------~~~V~v~G~a~vv~D~e~~---~~lw~~~~~---~---------------------~~p~g---~~-dP 135 (182)
T 3u35_A 98 -----------DLFASISGSLREDTDPAMV---DRLWNPYVA---A---------------------WYEGG---KT-DP 135 (182)
T ss_dssp -----------SEEEEEEEEEEECCCHHHH---HHHCCHHHH---T---------------------TCTTG---GG-CT
T ss_pred -----------CeEEEEEEEEEEEcCHHHH---HHHHHHHHH---H---------------------hccCC---CC-CC
Confidence 2368999999999875432 112122221 0 23321 23 78
Q ss_pred CeEEEEEEEeEEEEEeCCCc
Q 021753 167 KYVVYKFNISSCMYIDGHGG 186 (308)
Q Consensus 167 df~~~rL~~~~~~lv~gfG~ 186 (308)
++.++|++|+++.|-++.+.
T Consensus 136 ~~~vlrv~p~~~e~Wd~~~~ 155 (182)
T 3u35_A 136 NLALLRLDADHAQIWLNESS 155 (182)
T ss_dssp TEEEEEEEEEEEEEEEEEEE
T ss_pred CEEEEEEEeCEEEEEeCCCC
Confidence 99999999999999988763
No 30
>2qea_A Putative general stress protein 26; structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.46A {Jannaschia SP}
Probab=98.77 E-value=8.8e-08 Score=81.08 Aligned_cols=122 Identities=11% Similarity=0.046 Sum_probs=92.0
Q ss_pred HHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEe-c-CCe-EEEEecCCchhhcccccCCC-ceEEEeCCCCCc
Q 021753 11 LAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYML-K-KGK-PFIWVPEKDMHNVNTIIDER-GSFAVASPTPGP 86 (308)
Q Consensus 11 ~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~-d-~G~-p~~~vs~~a~Ht~nl~~dpr-~SL~v~~~~~~~ 86 (308)
..+.++.+|..+..++|+| +| .|+...+.|.. + +|. .+|+-+..+...+||..||+ ++|.+.....
T Consensus 5 ~~~~~~~~L~~~~~~~LaT-----dG---~P~~rpv~~~~~~~~g~~l~f~t~~~s~K~~~l~~np~~v~l~~~~~~~-- 74 (160)
T 2qea_A 5 LTHEFWDRLEDVRSGMLGI-----KG---QGRLIPMSPQTDDDAPGAIWFITAKGTDLAKGVAAGPQPAQFVVSDDGE-- 74 (160)
T ss_dssp HHHHHHHHHTTCCCEEEEE-----TT---SSCCEEECCBCCTTSCSCEEEEEETTSHHHHHTSSSCEEEEEEEEETTT--
T ss_pred HHHHHHHHHhcCCEEEEEe-----CC---CeeEEEeeeeEecCCCCEEEEEECCCCHHHHHHHhCCceEEEEEECCCC--
Confidence 3578999999999999999 25 89999999974 4 788 99999999999999999999 9999987542
Q ss_pred hhhhhcccCCCCcEEEEEEEEEEcCchhHH-HHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchhhhhccC
Q 021753 87 LAKLLHSIKKIPTRVALSGDIAPLKSEKAQ-LAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLKDLLDER 165 (308)
Q Consensus 87 l~~~~~~~~~~~~Rvtl~G~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~~~ld~~ 165 (308)
..-+.+.|.++.+.+.+.. ..+..+.+.|+ |+. .+ .
T Consensus 75 -----------~~~v~v~G~a~~v~d~~~~~~~~~~~~~~~~----------------------------~~~---~~-~ 111 (160)
T 2qea_A 75 -----------GLYADLDGTLERSTDREALDEFWSFVADAWF----------------------------DGG---QH-D 111 (160)
T ss_dssp -----------TEEEEEEEEEEEECCHHHHHHSCCHHHHHHC----------------------------TTC---SS-C
T ss_pred -----------CeEEEEEEEEEEEcCHHHHHHHHHHHHHHHc----------------------------cCC---CC-C
Confidence 2368889999999875432 11111112221 211 12 5
Q ss_pred CCeEEEEEEEeEEEEEeCCC
Q 021753 166 EKYVVYKFNISSCMYIDGHG 185 (308)
Q Consensus 166 ~df~~~rL~~~~~~lv~gfG 185 (308)
+++.+|+++|+++.|-++-+
T Consensus 112 p~~~v~~i~p~~~e~w~~~~ 131 (160)
T 2qea_A 112 PDVCLLKFTPASGEISITEG 131 (160)
T ss_dssp TTEEEEEEEEEEEEEEEECC
T ss_pred CCEEEEEEECCEEEEEECCC
Confidence 78999999999999988653
No 31
>2q9k_A Uncharacterized protein; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: UNL; 1.59A {Exiguobacterium sibiricum}
Probab=98.75 E-value=9.7e-08 Score=80.65 Aligned_cols=116 Identities=13% Similarity=-0.058 Sum_probs=91.3
Q ss_pred HHHHHHHhhCCceEEeeeccCCCCCC-CceeeeeeeeEe--cCCeEEEEecCCchhhcccccCCCceEEEeCCCCCchhh
Q 021753 13 EKCKNILAANWQGRLNTIKADAEGSK-ESIYTSKVKYML--KKGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPLAK 89 (308)
Q Consensus 13 e~aRtll~~~~~~~LaT~~~~~~G~~-g~P~~S~v~y~~--d~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l~~ 89 (308)
+.++.+|.....+.|+|++ .+ |.|+.|.+.|+. |+|..+|..+....+.+||..||+++|++.++..
T Consensus 12 ~e~~elL~~~~~~~LATv~-----~d~G~P~~sp~~~~~~~d~~~l~f~~~~~~~k~~nl~~np~Vsl~v~~~~~----- 81 (151)
T 2q9k_A 12 EQQMKALTDLPLVFLITHD-----QSKSWPITHAISWVYAKDETTIRFAIEADSLLVKTLADHPVFTLIFFADQS----- 81 (151)
T ss_dssp HHHHHHTSSCCCEEEEECC-----TTSSSCEEEEECCEEEEETTEEEEEEETTCTHHHHHHHSCCEEEEEEETTE-----
T ss_pred HHHHHHHhcCCEEEEEEEc-----CCCCcEeEeeeEEEEEeCCCEEEEEECCCcHHHHHHHhCCcEEEEEECCCC-----
Confidence 4799999999999999986 34 599999998884 5899999999999999999999999999986432
Q ss_pred hhcccCCCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchhhhhccCCCeE
Q 021753 90 LLHSIKKIPTRVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLKDLLDEREKYV 169 (308)
Q Consensus 90 ~~~~~~~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~~~ld~~~df~ 169 (308)
-+.+.|+++.+.+... . .| .+..
T Consensus 82 ----------~~~i~G~A~~v~d~~e--------------------------------------~-----~~----~~~~ 104 (151)
T 2q9k_A 82 ----------TYSLTCTDVAAWETTA--------------------------------------R-----LP----LKVA 104 (151)
T ss_dssp ----------EEEEEEEEEEEECCSS--------------------------------------C-----CS----SCEE
T ss_pred ----------EEEEEEEEEEEeCccc--------------------------------------c-----CC----cceE
Confidence 3678999998875321 1 11 1457
Q ss_pred EEEEEEeEEEEEeCCCceeeechhhhc
Q 021753 170 VYKFNISSCMYIDGHGGTHEVDLKDVQ 196 (308)
Q Consensus 170 ~~rL~~~~~~lv~gfG~a~~v~~~d~~ 196 (308)
+++++|++++=+-..| +...+.-.|.
T Consensus 105 li~v~i~~v~~~~f~g-~~~~~~~~~~ 130 (151)
T 2q9k_A 105 LYEGQIKEVRDILFYG-AAVSDRPRVY 130 (151)
T ss_dssp EEEEEEEEEEECSCTT-CCCSSCCCCC
T ss_pred EEEEEEEEEEEccccC-ceeeccceee
Confidence 8999999999987777 4444444453
No 32
>3cp3_A Uncharacterized protein; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Corynebacterium diphtheriae nctc 13129ORGANISM_TAXID}
Probab=98.73 E-value=1.8e-07 Score=77.89 Aligned_cols=116 Identities=14% Similarity=0.161 Sum_probs=86.2
Q ss_pred HHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEec----CCeEEEEecCCchhhcccccCCCceEEEeCCCCCc
Q 021753 11 LAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLK----KGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGP 86 (308)
Q Consensus 11 ~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d----~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~ 86 (308)
..+.++.+|..+..|.|+|.. +| .|+.+.+.|+.+ +|..||..+ ......||..||+++|.|.+....
T Consensus 16 ~~~e~~~~L~~~~~~~Lat~~---dg---~P~v~Pv~f~~~~~~~~~~lyf~ta-~~~K~~~l~~np~V~~~v~~~~~~- 87 (148)
T 3cp3_A 16 DSSDSLSRLSSESVGRLVVHR---KD---DLDIFPVNFVLDYSAEQPRVYFRTA-EGTKLFSVNLNSDVLFEVDRFDDA- 87 (148)
T ss_dssp CHHHHHHHHHTCSEEEEEEEE---TT---EEEEEEEEEEEECSSSSCEEEEEEC---CCSSCTTSCSEEEEEEEECC---
T ss_pred CHHHHHHHHhcCCEEEEEEEe---CC---EEEEEEEEEEEEecCCCCEEEEEcC-CCchHHHHhcCCcEEEEEEECCCC-
Confidence 346789999999999999984 34 899999999988 688999888 677889999999999999874321
Q ss_pred hhhhhcccCCCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchhhhhccCC
Q 021753 87 LAKLLHSIKKIPTRVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLKDLLDERE 166 (308)
Q Consensus 87 l~~~~~~~~~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~~~ld~~~ 166 (308)
. .--|.+.|+++.+.+.+.. ...+. . ..+.|.. ..
T Consensus 88 ~----------~~sV~v~G~a~~v~d~~e~-------~~~l~-------------------------~--~~~~~~~-~~ 122 (148)
T 3cp3_A 88 E----------GWSVVLKGNAYVVRDTEEA-------RHADT-------------------------L--GLKPWLP-TL 122 (148)
T ss_dssp C----------EEEEEEEEEEEECCCHHHH-------HHHTT-------------------------S--CCCCCCT-TC
T ss_pred C----------CeEEEEEEEEEEECCHHHH-------HHHHh-------------------------c--cccccCC-CC
Confidence 1 1268999999999876432 22332 1 1223333 46
Q ss_pred CeEEEEEEEeEEE
Q 021753 167 KYVVYKFNISSCM 179 (308)
Q Consensus 167 df~~~rL~~~~~~ 179 (308)
...+|||+|+++.
T Consensus 123 ~~~viri~~~~~t 135 (148)
T 3cp3_A 123 KYNFVRIDVREVS 135 (148)
T ss_dssp CCEEEEEEEEEEE
T ss_pred ceEEEEEEeEEEE
Confidence 8899999999886
No 33
>3fkh_A Putative pyridoxamine 5'-phosphate oxidase; NP_601736.1, STR genomics, joint center for structural genomics, JCSG; HET: P33; 2.51A {Corynebacterium glutamicum atcc 13032}
Probab=98.71 E-value=1.2e-07 Score=79.00 Aligned_cols=123 Identities=13% Similarity=0.124 Sum_probs=85.9
Q ss_pred HHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEecCCeEEEEecCCchhhcccccCCCceEEEeCCCCCchhhhh
Q 021753 12 AEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLKKGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPLAKLL 91 (308)
Q Consensus 12 ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l~~~~ 91 (308)
.+.++.+|..+..|.|+|.. +| .||...+.|+.++|..||.-+. .....||..||+++|.|.+..+. .
T Consensus 11 ~~e~~~lL~~~~~g~La~~~---dg---~P~vvPv~f~~~~~~iyfh~a~-g~K~~~i~~~~~V~f~vd~~~~~--~--- 78 (138)
T 3fkh_A 11 EQEALERLQSVSLGRVVVRR---SD---EMDIFPVNFIVDKGAIYIRTAE-GNKLFSMNLNHDVLFEADEVKDG--K--- 78 (138)
T ss_dssp HHHHHHHHTTCSEEEEEEEE---TT---EEEEEEEEEEEETTEEEEEEEC---------CCSEEEEEEEEEETT--E---
T ss_pred HHHHHHHHccCCEEEEEEee---CC---EEEEEEEEEEEECCEEEEEeCC-ChHHHHhhcCCCEEEEEEECCCC--C---
Confidence 45689999999999999984 35 9999999999999999998887 55788999999999999875432 1
Q ss_pred cccCCCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchhhhhccCCCeEEE
Q 021753 92 HSIKKIPTRVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLKDLLDEREKYVVY 171 (308)
Q Consensus 92 ~~~~~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~~~ld~~~df~~~ 171 (308)
+| .|.+.|+++.+.+++.. +++... ....|.. .....++
T Consensus 79 ---~~---SV~v~G~a~~v~d~~e~------~~a~~~----------------------------~~~~~~~-~~~~~~i 117 (138)
T 3fkh_A 79 ---AW---SVVVRATAEIVRKLDEI------AYADTL----------------------------ELKPWIP-TLKYNYV 117 (138)
T ss_dssp ---EE---EEEEEEEEEECCSHHHH------HHHHHS----------------------------CCCCSSC-CSSEEEE
T ss_pred ---CE---EEEEEEEEEEECCHHHH------HHHHhc----------------------------ccCCCCC-CCccEEE
Confidence 23 79999999999876543 122110 0123333 5677999
Q ss_pred EEEEeEEEEEeCCCceeeech
Q 021753 172 KFNISSCMYIDGHGGTHEVDL 192 (308)
Q Consensus 172 rL~~~~~~lv~gfG~a~~v~~ 192 (308)
|++|+++. |+...+.+
T Consensus 118 rI~p~~it-----Gr~~~~~~ 133 (138)
T 3fkh_A 118 RIVPNEIT-----GREFTLGE 133 (138)
T ss_dssp EEEEEEEE-----EEEEECCC
T ss_pred EEEEEEEE-----EEEeecCC
Confidence 99999986 65555543
No 34
>2fur_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Thermoplasma acidophilum} SCOP: b.45.1.1
Probab=98.55 E-value=3.9e-07 Score=80.57 Aligned_cols=99 Identities=10% Similarity=-0.004 Sum_probs=76.2
Q ss_pred CCHHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEecCCeEEEEecCCchhhcccccCCCceEEEeCCCCCchh
Q 021753 9 LTLAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLKKGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPLA 88 (308)
Q Consensus 9 ~s~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l~ 88 (308)
.+..+.++.+|..+..|+|+|.. +| .|+++.+.|+.++|..||..+....+.+||..||++++.|.........
T Consensus 19 ~~d~~ei~~~L~~~~~~~Lat~~---dg---~P~v~Pv~f~~~~~~lyfhta~~~~k~~~l~~np~V~~~v~~~~~~v~~ 92 (209)
T 2fur_A 19 SYSDEDLVAMLDRNFTCTVSFID---GG---IPYAIPMMLASEGKTIYLHGSMKSRIYGILKTGQLIAISLLEINGIVLA 92 (209)
T ss_dssp ECCHHHHHHHHHHCSEEEEEEEE---TT---EEEEEEEECEEETTEEEEEEETTSHHHHHHHTTCCEEEEEEEEEEEEEC
T ss_pred cCCHHHHHHHHHhCCEEEEEEcc---CC---EEEEEEEEEEEECCEEEEEeCCcCHHHHHhhcCCeEEEEEEcCCeeecC
Confidence 35567799999999999999986 24 8999999999999999999999899999999999999999875321000
Q ss_pred -hhhcccCCCCcEEEEEEEEEEcCchh
Q 021753 89 -KLLHSIKKIPTRVALSGDIAPLKSEK 114 (308)
Q Consensus 89 -~~~~~~~~~~~Rvtl~G~~~~v~~~~ 114 (308)
..+.. .+.-.-|.+.|+++.+.+++
T Consensus 93 ~~~~~~-t~~y~sV~v~G~a~~v~d~~ 118 (209)
T 2fur_A 93 KEIKNN-SINYVSALIFGRPYEIDDTE 118 (209)
T ss_dssp SBGGGC-EEEEEEEEEEECCEECCCHH
T ss_pred CCCCCC-ccEEEEEEEEEEEEEECCHH
Confidence 00000 01124689999999998753
No 35
>3ba3_A Protein LP_0091, pyridoxamine 5'-phosphate oxidase-like protein; NP_783940.1, structural genomics; HET: MSE; 1.55A {Lactobacillus plantarum WCFS1}
Probab=98.54 E-value=1.1e-06 Score=74.06 Aligned_cols=128 Identities=10% Similarity=0.046 Sum_probs=99.2
Q ss_pred HHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeE--ec-CCeEEEEecCCchhhcccccCCCceEEEeCCCCCchh
Q 021753 12 AEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYM--LK-KGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPLA 88 (308)
Q Consensus 12 ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~--~d-~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l~ 88 (308)
++.+-.+|..+..++|||.. +| .|.+..+.|. .. ++..||+-+......++|..||+++++....+... .
T Consensus 4 ~~~i~~~L~~~~~~~LAT~~---~g---~P~vR~v~f~~~~~~~~~LYF~T~~~k~k~~ql~~Np~V~i~~~~~d~~~-~ 76 (145)
T 3ba3_A 4 ISLLKQVVQSTNKIALSTAV---NN---EADVKIVNFVWYEAQPDTLYFSSVKTSPALKVYDQNPDIAFITIPNDGTA-G 76 (145)
T ss_dssp CHHHHHHHHTEEEEEEEEEE---TT---EEEEEEEECEECTTSTTEEEEEEETTCTHHHHHTTCCEEEEEEEECTTCT-T
T ss_pred HHHHHHHHHhCCcEEEEECC---CC---CEEEEEEEEEEEecCCCEEEEEECCCCHHHHHHHhCCCEEEEEECCCCCc-c
Confidence 35677788999999999942 24 9999999999 33 89999999999999999999999999755433211 1
Q ss_pred hhhcccCCCCcEEEEE-EEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchhhhhc-cCC
Q 021753 89 KLLHSIKKIPTRVALS-GDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLKDLLD-ERE 166 (308)
Q Consensus 89 ~~~~~~~~~~~Rvtl~-G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~~~ld-~~~ 166 (308)
..-|.+. |.+...+++.. .+++.++. ..|.++.+.+ ...
T Consensus 77 ---------~~~IRi~~G~a~~~~~~~~-----~~k~~~~e-------------------------~~P~~k~~y~~~~~ 117 (145)
T 3ba3_A 77 ---------NPYLRAQHVKLQRSTKTMT-----DLLPQYLE-------------------------TVPNYQQVWDAIGS 117 (145)
T ss_dssp ---------CCEEEEEEEEEEECSCCHH-----HHHHHHHH-------------------------HSTTHHHHHHHHGG
T ss_pred ---------ceEEEEEeEEEEEcCCchH-----HHHHHHHH-------------------------hChhhhhcccCCCC
Confidence 3467779 99999864222 25677777 7788888776 345
Q ss_pred CeEEEEEEEeEEEEEeCCC
Q 021753 167 KYVVYKFNISSCMYIDGHG 185 (308)
Q Consensus 167 df~~~rL~~~~~~lv~gfG 185 (308)
.|.+|+|++.++.+.++-|
T Consensus 118 ~l~vf~i~~~~a~~~~~~~ 136 (145)
T 3ba3_A 118 TLVVFELKLTDLFVDAGVG 136 (145)
T ss_dssp GEEEEEEECSEEEEECCTT
T ss_pred cEEEEEEECCEEEEECCCC
Confidence 7999999999999998554
No 36
>2vpa_A NIMA-related protein; cofactor, atomic resolution, antibiotic resistance, oxidoreductase; 1.2A {Deinococcus radiodurans} SCOP: b.45.1.1 PDB: 1w3p_A 1w3q_A 1w3r_A* 1w3o_A 2x1k_A 2x1j_A
Probab=98.44 E-value=8.1e-07 Score=79.17 Aligned_cols=102 Identities=11% Similarity=0.022 Sum_probs=73.9
Q ss_pred CHHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEecCCe--EEEEecCCchhhcccccCCCceEEEeCCCCCch
Q 021753 10 TLAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLKKGK--PFIWVPEKDMHNVNTIIDERGSFAVASPTPGPL 87 (308)
Q Consensus 10 s~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d~G~--p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l 87 (308)
...+.++.+|..+..|+|+|...+. -.+|.|+++.+.|+.++|. .||..+....+.+||..||+++|.|........
T Consensus 43 ~d~~ei~~~L~~~~~~~Lat~~~~~-~~dg~P~v~Pv~f~~d~~~~~Lyfhta~~~~K~~~l~~np~V~~~v~~~~~~v~ 121 (216)
T 2vpa_A 43 QSDEWIRELLLRGTIARVATLWQGE-DGAAFPFITPLAYAYRPEQGDLVYHTNVVGRLRANAGQGHPATLEVSEIGQFLP 121 (216)
T ss_dssp CCHHHHHHHHHHCCEEEEEEEEECT-TSCEEEEEEEEECEEETTTTEEEEECCCCCSSBSSCSSEEEEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHhCCEEEEEEccCCC-CCCCceEEEEEEEEEECCeeEEEEEecCcCHHHHHhccCCcEEEEEEeCCeecc
Confidence 5567799999999999999986100 0124899999999999777 888888888999999999999999987542000
Q ss_pred h-hhhcccCCCCcEEEEEEEEEEcCchh
Q 021753 88 A-KLLHSIKKIPTRVALSGDIAPLKSEK 114 (308)
Q Consensus 88 ~-~~~~~~~~~~~Rvtl~G~~~~v~~~~ 114 (308)
. ..+.. .|.-.-|.+.|+++.+ +++
T Consensus 122 ~~~~~~~-t~~y~sV~v~G~a~~v-d~~ 147 (216)
T 2vpa_A 122 SNSPLEL-SVQYRSVMVFGTARVL-AGE 147 (216)
T ss_dssp CSSGGGC-EEEEEEEEEEEEEEEC-CHH
T ss_pred CccCCCC-cccEEEEEEEEEEEEE-CHH
Confidence 0 00000 0112469999999999 653
No 37
>1dnl_A Pyridoxine 5'-phosphate oxidase; beta barrel, protein-FMN complex, oxidoreductase; HET: MSE FMN; 1.80A {Escherichia coli K12} SCOP: b.45.1.1 PDB: 1g79_A* 1g76_A* 1g78_A* 1g77_A* 1jnw_A* 1wv4_A*
Probab=98.24 E-value=5e-06 Score=73.16 Aligned_cols=77 Identities=13% Similarity=0.032 Sum_probs=61.3
Q ss_pred hhCCceEEeeeccCCCCCCCceeeeeeeeE-ecCCeEEEEecCCchhhcccccCCCceEEEeCCCCCchhhhhcccCCCC
Q 021753 20 AANWQGRLNTIKADAEGSKESIYTSKVKYM-LKKGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPLAKLLHSIKKIP 98 (308)
Q Consensus 20 ~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~-~d~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l~~~~~~~~~~~ 98 (308)
.....++|||++. +|.|....|.+. .+++.++|+-...+.+.+||..||+++|++..+.. .
T Consensus 29 ~~~~~~~LATv~~-----dG~P~~R~v~~~~~d~~gl~F~T~~~S~K~~~L~~np~v~l~f~~~~~-------------~ 90 (199)
T 1dnl_A 29 ADPTAMVVATVDE-----HGQPYQRIVLLKHYDEKGMVFYTNLGSRKAHQIENNPRVSLLFPWHTL-------------E 90 (199)
T ss_dssp SCTTEEEEEEECT-----TSCEEEEEEECCEEETTEEEEEEETTSHHHHHHHHCCEEEEEECCGGG-------------T
T ss_pred CCCcEEEEEEECC-----CCCEEEEEEEEEEEcCCEEEEEECCCCHHHHHHhhCCeEEEEEEcCCC-------------C
Confidence 3457899999973 348999888774 45445888888888999999999999999987432 3
Q ss_pred cEEEEEEEEEEcCchh
Q 021753 99 TRVALSGDIAPLKSEK 114 (308)
Q Consensus 99 ~Rvtl~G~~~~v~~~~ 114 (308)
..|.|.|.++.+.+++
T Consensus 91 ~qvri~G~a~~v~d~~ 106 (199)
T 1dnl_A 91 RQVMVIGKAERLSTLE 106 (199)
T ss_dssp EEEEEEEEEEECCHHH
T ss_pred EEEEEEEEEEEeCCcc
Confidence 4789999999998754
No 38
>1ty9_A Phenazine biosynthesis protein PHZG; chorismate, oxidoreductase; HET: FMN; 1.80A {Pseudomonas fluorescens} SCOP: b.45.1.1 PDB: 1t9m_A*
Probab=98.19 E-value=1.3e-05 Score=71.75 Aligned_cols=77 Identities=12% Similarity=0.026 Sum_probs=61.3
Q ss_pred hhCCceEEeeeccCCCCCCCceeeeeeeeE-ecCCeEEEEecCCchhhcccccCCCceEEEeCCCCCchhhhhcccCCCC
Q 021753 20 AANWQGRLNTIKADAEGSKESIYTSKVKYM-LKKGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPLAKLLHSIKKIP 98 (308)
Q Consensus 20 ~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~-~d~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l~~~~~~~~~~~ 98 (308)
...+.++|||++. +|.|....|-+. .+++.++|+-...+.+.+||..||+++|++..+.. .
T Consensus 54 ~~~~~~~LATvd~-----dG~P~~R~v~l~~~d~~gl~F~T~~~S~K~~eL~~nP~val~f~~~~~-------------~ 115 (222)
T 1ty9_A 54 REPRALALATADS-----QGRPSTRIVVISEISDAGVVFSTHAGSQKGRELLHNPWASGVLYWRET-------------S 115 (222)
T ss_dssp SSTTEEEEEEECT-----TCCEEEEEEECCEECSSEEEEEEETTSHHHHHHHHCCEEEEEEEETTT-------------T
T ss_pred CCCCEEEEEEECC-----CCCEEEEEEEEEEEcCCEEEEEECCCCcchHHHhhCCeEEEEEEcCCC-------------C
Confidence 3457899999973 348999888764 45455888888889999999999999999987543 3
Q ss_pred cEEEEEEEEEEcCchh
Q 021753 99 TRVALSGDIAPLKSEK 114 (308)
Q Consensus 99 ~Rvtl~G~~~~v~~~~ 114 (308)
..|.|.|.++.+.+++
T Consensus 116 rqvrI~G~ae~v~~~~ 131 (222)
T 1ty9_A 116 QQIILNGQAVRLPNAK 131 (222)
T ss_dssp EEEEEEEEEEECCHHH
T ss_pred eEEEEEEEEEEEccHH
Confidence 4689999999998544
No 39
>2i51_A Uncharacterized conserved protein of COG5135; pyridoxamine 5'-phosphate oxidase-related protein, structura genomics; HET: MSE FMN; 1.40A {Nostoc punctiforme}
Probab=97.99 E-value=5.6e-05 Score=66.14 Aligned_cols=140 Identities=8% Similarity=0.063 Sum_probs=87.1
Q ss_pred CceEEeeeccCCCCCCCceeeeeeeeE-ecC--CeEEEEecCCchhhcccccCCCceEEEeCCCCCchhhhhcccCCCCc
Q 021753 23 WQGRLNTIKADAEGSKESIYTSKVKYM-LKK--GKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPLAKLLHSIKKIPT 99 (308)
Q Consensus 23 ~~~~LaT~~~~~~G~~g~P~~S~v~y~-~d~--G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l~~~~~~~~~~~~ 99 (308)
+.++|||++. +|.|....|-+. .++ +.++|+-...+...+||..||+++|++..+.. ..
T Consensus 25 ~~~~LATv~~-----dG~P~~R~v~~~~~d~~~~~l~F~T~~~S~K~~~l~~np~v~l~f~~~~~-------------~~ 86 (195)
T 2i51_A 25 RYLQLATVQP-----NGRPANRTLVFRGFLEDTNQLRFITDTRSAKADQIQQQPWAEICWYFPNT-------------RE 86 (195)
T ss_dssp GEEEEEEECT-----TSCEEEEEEECCCBCTTSSCEEEEEETTSHHHHHHHHCCEEEEEEEETTT-------------TE
T ss_pred CEEEEEEECC-----CCCeeEEEEEEEEEcCCCCeEEEEEcCCccHHHHHhhCCeEEEEEEeCCC-------------CE
Confidence 3699999973 348998887664 343 48999999999999999999999999987533 33
Q ss_pred EEEEEEEEEEcCchhHHHHHHHHHHHHhhhh----hh-hccccccccccccCCccccccCCcchhhhhccCCCeEEEEEE
Q 021753 100 RVALSGDIAPLKSEKAQLAAECLKEVMLSEQ----RV-IGESSYTVSGVLSSSNFITTSRNENLKDLLDEREKYVVYKFN 174 (308)
Q Consensus 100 Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~rhp~~~~~ld~~~df~~~rL~ 174 (308)
.|.|.|.++.+.+++........+..|.... +. ...++.+ ..+.+.......+++. .+...++|..|+|.
T Consensus 87 qvri~G~a~~v~~~~~~~~~~~~r~~~w~~~~~~sr~~~~~~spg--~~~~~~~~~~~~~~~~---~~p~p~~w~~~~v~ 161 (195)
T 2i51_A 87 QFRMAGDLTLISSDDSHQDLQPARIAMWQELSDAARLQFGWPYPG--KPRIKESGAFEPSPPD---PIEPVPNFCLLLLD 161 (195)
T ss_dssp EEEEEEEEEEECSSSTTGGGHHHHHHHHHHSCHHHHHGGGSCCTT--SBCCCCGGGGCCCCCC---SSSCCTTEEEEEEE
T ss_pred EEEEEEEEEEEChHHhhhhhHHHHHHHHHhCChhhhhhcccCCCC--CCccchhHHhhhhccC---CCCCCCceEEEEEE
Confidence 6889999999987654200112334444311 00 0111111 1111111111112221 12235689999999
Q ss_pred EeEEEEEeCCC
Q 021753 175 ISSCMYIDGHG 185 (308)
Q Consensus 175 ~~~~~lv~gfG 185 (308)
|++|-|..|-.
T Consensus 162 P~~iefwq~~~ 172 (195)
T 2i51_A 162 PVQVDHLELRG 172 (195)
T ss_dssp EEEEEEEESSS
T ss_pred ccEEEEEecCC
Confidence 99998887654
No 40
>1nrg_A Pyridoxine 5'-phosphate oxidase; PLP, FMN, oxidoreductase; HET: FMN PLP; 1.95A {Homo sapiens} SCOP: b.45.1.1 PDB: 3hy8_A*
Probab=97.95 E-value=4.9e-05 Score=69.75 Aligned_cols=76 Identities=12% Similarity=-0.016 Sum_probs=61.0
Q ss_pred CCceEEeeeccCCCCCCCceeeeeeeeE-ecCCeEEEEecCCchhhcccccCCCceEEEeCCCCCchhhhhcccCCCCcE
Q 021753 22 NWQGRLNTIKADAEGSKESIYTSKVKYM-LKKGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPLAKLLHSIKKIPTR 100 (308)
Q Consensus 22 ~~~~~LaT~~~~~~G~~g~P~~S~v~y~-~d~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l~~~~~~~~~~~~R 100 (308)
.+.++|||++. +|.|....|-+. .+++.++|+-...+.+.+||..||+++|++..+.. ...
T Consensus 78 ~~~~~LATvd~-----dG~P~~R~V~lk~~d~~gl~F~Tn~~S~K~~eL~~NP~vaL~f~~~~~-------------~rq 139 (261)
T 1nrg_A 78 ANAMCLATCTR-----DGKPSARMLLLKGFGKDGFRFFTNFESRKGKELDSNPFASLVFYWEPL-------------NRQ 139 (261)
T ss_dssp TTEEEEEEECT-----TSCEEEEEEECCCEETTEEEEEEETTSHHHHHHHHSCEEEEEEEEGGG-------------TEE
T ss_pred CcEEEEEEECC-----CCCeeEEEEEEEEEcCCEEEEEECCCChhHHHHhhCCeEEEEEEeCCC-------------CEE
Confidence 56799999973 348999888764 45444999999999999999999999999986432 347
Q ss_pred EEEEEEEEEcCchhH
Q 021753 101 VALSGDIAPLKSEKA 115 (308)
Q Consensus 101 vtl~G~~~~v~~~~~ 115 (308)
|.|.|.++.+.+++.
T Consensus 140 VrI~G~ae~v~d~e~ 154 (261)
T 1nrg_A 140 VRVEGPVKKLPEEEA 154 (261)
T ss_dssp EEEEEEEEECCHHHH
T ss_pred EEEEEEEEEecCcch
Confidence 899999999987654
No 41
>2ou5_A Pyridoxamine 5'-phosphate oxidase-related, FMN-BI; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: MSE FMN; 1.60A {Jannaschia SP}
Probab=97.92 E-value=6.7e-05 Score=64.59 Aligned_cols=122 Identities=9% Similarity=-0.024 Sum_probs=79.8
Q ss_pred CceEEeeeccCCCCCCCceeeeeeee-Eec--CCeEEEEecCCchhhcccccCCCceEEEeCCCCCchhhhhcccCCCCc
Q 021753 23 WQGRLNTIKADAEGSKESIYTSKVKY-MLK--KGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPLAKLLHSIKKIPT 99 (308)
Q Consensus 23 ~~~~LaT~~~~~~G~~g~P~~S~v~y-~~d--~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l~~~~~~~~~~~~ 99 (308)
+.++|||++ .+| |..-.|-+ ..+ ++.++|+-...+...+||..||+++|++..+.. ..
T Consensus 30 ~~~~LATv~-----~dG-P~~R~v~~~~~~~~~~~l~F~T~~~s~K~~~l~~nP~v~l~f~~~~~-------------~~ 90 (175)
T 2ou5_A 30 RHPTLATIG-----TDG-PDLRTLVLRAASHAEATLEFHTDAASPKVAHIRRDARVAIHIWIPKA-------------SL 90 (175)
T ss_dssp GSCEEEEEE-----TTE-EEEEECCCCEEETTTTEEEEEEETTSHHHHHHHHCCEEEEEEEEGGG-------------TE
T ss_pred ceEEEEEeC-----CCC-CceeEEEEEEEEcCCCEEEEEECCCChHHHHHhhCCcEEEEEEeCCC-------------CE
Confidence 679999996 457 88855544 233 478898999889999999999999999987432 33
Q ss_pred EEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchh---hhhccCCCeEEEEEEEe
Q 021753 100 RVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLK---DLLDEREKYVVYKFNIS 176 (308)
Q Consensus 100 Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~---~~ld~~~df~~~rL~~~ 176 (308)
.|.|.|.++.+.+++..+ ...-..... ++.+ ..|... .++...++|.+|++.|+
T Consensus 91 qvri~G~a~~~~d~~~~w--~~~~~~~~~-------------~~~~--------~~~~~~~~~~l~~~p~~~~~~~v~p~ 147 (175)
T 2ou5_A 91 QVRAKAIAKILPGDPNLF--AQLPEAARM-------------NYQG--------PVPGTPLPAEPDATPNRFTRLICHLS 147 (175)
T ss_dssp EEEEEEEEEEEECCHHHH--HHSCHHHHG-------------GGSS--------SCTTCBSSCCCCCCSCCEEEEEEEEE
T ss_pred EEEEEEEEEEeCcHHHHH--HHCCHhHHh-------------cccC--------CCCCCccccccCCCCCcEEEEEEEee
Confidence 678899999997762111 110000100 0111 001100 01223578999999999
Q ss_pred EEEEEeCCCc
Q 021753 177 SCMYIDGHGG 186 (308)
Q Consensus 177 ~~~lv~gfG~ 186 (308)
++.|.++-+.
T Consensus 148 ~vefw~~~~~ 157 (175)
T 2ou5_A 148 EIDVLHLTTP 157 (175)
T ss_dssp EEEEEECCSS
T ss_pred EEEEEeCCCC
Confidence 9999987664
No 42
>1ci0_A Protein (PNP oxidase); B6 metabolism, structural genomics, PSI, protein structure initiative; HET: FMN; 2.70A {Saccharomyces cerevisiae} SCOP: b.45.1.1
Probab=97.92 E-value=9.7e-05 Score=66.41 Aligned_cols=76 Identities=7% Similarity=0.008 Sum_probs=60.1
Q ss_pred hCCceEEeeec-cCCCCCCCceeeeeeeeE-ecCCeEEEEecCC-chhhcccccCCCceEEEeCCCCCchhhhhcccCCC
Q 021753 21 ANWQGRLNTIK-ADAEGSKESIYTSKVKYM-LKKGKPFIWVPEK-DMHNVNTIIDERGSFAVASPTPGPLAKLLHSIKKI 97 (308)
Q Consensus 21 ~~~~~~LaT~~-~~~~G~~g~P~~S~v~y~-~d~G~p~~~vs~~-a~Ht~nl~~dpr~SL~v~~~~~~~l~~~~~~~~~~ 97 (308)
....++|||++ . +|.|..-.|-+. .+++.++|+-... +.+.++|..||+|+|++..+..
T Consensus 54 ~~~~~~LATvd~~-----dG~P~~R~V~lk~~d~~g~~F~Tn~~~S~K~~eL~~NP~val~f~~~~~------------- 115 (228)
T 1ci0_A 54 LPEAITFSSAELP-----SGRVSSRILLFKELDHRGFTIYSNWGTSRKAHDIATNPNAAIVFFWKDL------------- 115 (228)
T ss_dssp CTTEEEEEEEETT-----TTEEEEEEEECCEECSSSEEEEEECSSSHHHHHHHHCCEEEEEEEETTT-------------
T ss_pred CCCEEEEEEeeCC-----CCCeEEEEEEEEEECCCEEEEEeCCCCCcchHHHhhCCeEEEEEEeCCC-------------
Confidence 34578999986 4 248999888763 4533389999999 9999999999999999987533
Q ss_pred CcEEEEEEEEEEcCchh
Q 021753 98 PTRVALSGDIAPLKSEK 114 (308)
Q Consensus 98 ~~Rvtl~G~~~~v~~~~ 114 (308)
...|.|.|.++.+++++
T Consensus 116 ~rqVrI~G~ae~v~~~~ 132 (228)
T 1ci0_A 116 QRQVRVEGITEHVNRET 132 (228)
T ss_dssp TEEEEEEEEEEECCHHH
T ss_pred CEEEEEEEEEEEcCchh
Confidence 33689999999998654
No 43
>2ol5_A PAI 2 protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.50A {Geobacillus stearothermophilus}
Probab=97.73 E-value=0.00031 Score=61.70 Aligned_cols=98 Identities=6% Similarity=0.042 Sum_probs=73.6
Q ss_pred CHHHHHHHHHhhCCceEEeeeccCCCCCCCceeeeeeeeEecCC--eEEEEecCCchhhcccccCCCceEEEeCCCCCch
Q 021753 10 TLAEKCKNILAANWQGRLNTIKADAEGSKESIYTSKVKYMLKKG--KPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPL 87 (308)
Q Consensus 10 s~ae~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d~G--~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l 87 (308)
+..+.+..+|+.+..|+|+|.. +| .||++-++|+.+++ ..|+.++.-..+.++|.. +++++.|..+..-..
T Consensus 10 ~d~~~i~~il~~~~~g~L~~~~---~~---~py~~plpf~~~~~~~~Ly~H~A~~n~k~~~l~~-~~V~~~~~g~~~yis 82 (202)
T 2ol5_A 10 NDPDVAYQVIEENSFATLVSMH---QR---ELFATHLPLLLDREKTCLYGHFARSNPQWNDIQH-QTVLAIFHGPHCYIS 82 (202)
T ss_dssp -CCTHHHHHHHHSCEEEEEEEE---TT---EEEEEEEECEECTTSSEEEEEEETTSGGGGGCTT-SCEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHCCEEEEEEcc---CC---ccEEEEeeEEEECCCCEEEEEECCcChHHHhhCC-CCEEEEEEcCCEEec
Confidence 4456789999999999999985 23 89999999999854 899999999999999988 999998886543000
Q ss_pred hhhhcc----cCCCCcEEEEEEEEEEcCchh
Q 021753 88 AKLLHS----IKKIPTRVALSGDIAPLKSEK 114 (308)
Q Consensus 88 ~~~~~~----~~~~~~Rvtl~G~~~~v~~~~ 114 (308)
..++.. --|.-..|.+.|+++.+++++
T Consensus 83 ps~y~~~~~vpT~nY~SV~~~G~~~~v~D~~ 113 (202)
T 2ol5_A 83 PSWYETNQAVPTWNYVAVHVYGNVELINDQG 113 (202)
T ss_dssp GGGSSCSCCCCEEEEEEEEEEEEEEECCCHH
T ss_pred hhhcccCCCCCCcceEEEEEEEEEEEECCHH
Confidence 111210 012346899999999998543
No 44
>2a2j_A Pyridoxamine 5'-phosphate oxidase; beta barrel, structural genomics, mycobacterium tuberculosis structural proteomics project, XMTB; HET: CME; 2.50A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=97.60 E-value=0.00035 Score=63.47 Aligned_cols=76 Identities=12% Similarity=0.083 Sum_probs=60.4
Q ss_pred hCCceEEeeeccCCCCCCCceeeeeeeeE-ecCCeEEEEecCCchhhcccccCCCceEEEeCCCCCchhhhhcccCCCCc
Q 021753 21 ANWQGRLNTIKADAEGSKESIYTSKVKYM-LKKGKPFIWVPEKDMHNVNTIIDERGSFAVASPTPGPLAKLLHSIKKIPT 99 (308)
Q Consensus 21 ~~~~~~LaT~~~~~~G~~g~P~~S~v~y~-~d~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~~~l~~~~~~~~~~~~ 99 (308)
....++|||++ +| .|..-.|-+. .+++.++|+-...+...++|..||+|+|++..+.. ..
T Consensus 79 e~~~~~LATvd---dG---~P~~R~Vllk~~d~~gl~F~Tn~~S~K~~eL~~NP~vaL~f~~~~~-------------~r 139 (246)
T 2a2j_A 79 EPNAMVLATVA---DG---KPVTRSVLCKILDESGVAFFTSYTSAKGEQLAVTPYASATFPWYQL-------------GR 139 (246)
T ss_dssp STTEEEEEEEE---TT---EEEEEEEEEEEEETTEEEEEEETTSHHHHHHHHSCEEEEEEEEGGG-------------TE
T ss_pred CCceEEEEEcC---CC---ceEEEEEEEEEEcCCEEEEEEcCCChhhHHHhhCCeEEEEEEeCCC-------------CE
Confidence 34689999986 25 8998887664 45445999999999999999999999999986432 34
Q ss_pred EEEEEEEEEEcCchhH
Q 021753 100 RVALSGDIAPLKSEKA 115 (308)
Q Consensus 100 Rvtl~G~~~~v~~~~~ 115 (308)
.|.|.|.++.+++++.
T Consensus 140 qVrI~G~ae~v~~~es 155 (246)
T 2a2j_A 140 QAHVQGPVSKVSTEEI 155 (246)
T ss_dssp EEEEEEEEEECCHHHH
T ss_pred EEEEEEEEEEeccHhH
Confidence 7889999999986543
No 45
>3in6_A FMN-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: FMN; 2.12A {Syntrophomonas wolfei subsp}
Probab=97.09 E-value=0.011 Score=49.56 Aligned_cols=65 Identities=18% Similarity=0.185 Sum_probs=51.8
Q ss_pred HHHHHHHHHhh-CCceEEeeeccCCCCCCCceeeeeee--eEecCCeEEEEecCCchhhcccccCCCceEEEe
Q 021753 11 LAEKCKNILAA-NWQGRLNTIKADAEGSKESIYTSKVK--YMLKKGKPFIWVPEKDMHNVNTIIDERGSFAVA 80 (308)
Q Consensus 11 ~ae~aRtll~~-~~~~~LaT~~~~~~G~~g~P~~S~v~--y~~d~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~ 80 (308)
..|.+|.++.. --.|.|||.+. +|.|-.+++. +++|++...|.=.......+||+.||+++++|.
T Consensus 18 ~~~~~r~l~~~~v~~~~LATAdk-----dG~PNVa~~~~~~~~Dd~tI~iad~f~~kT~~NL~eNP~aav~~~ 85 (148)
T 3in6_A 18 LLEKARSLINANYISTTLSTVDR-----NYEVNIAVISVLEMIGDDTIICARFGADKTYANLKETGKGVFMVL 85 (148)
T ss_dssp HHHHHHHHHHHTCSSEEEEEECT-----TCCEEEEECCCEEEETTTEEEEEESSCHHHHHHHHHHCEEEEEEE
T ss_pred HHHHHHHHHhCCcceEEEEEcCC-----CCCccEEEEeeeEEecCCEEEEEeccchhHHHHHHhCCcEEEEEE
Confidence 46889999987 46899999984 3489998864 567788766654555688899999999999987
No 46
>3r5l_A Deazaflavin-dependent nitroreductase; PA-824, split barrel-like fold, DUF385, deazaflavin-dependen nitroreductase, nitroimidazoles; HET: MES; 1.55A {Mycobacterium tuberculosis} PDB: 3r5p_A 3r5w_A* 3r5r_A*
Probab=96.28 E-value=0.033 Score=45.13 Aligned_cols=81 Identities=9% Similarity=0.044 Sum_probs=55.5
Q ss_pred hCCceEEeeeccCCCCCCCceeeeeeeeEecCCeEEEEecC-----CchhhcccccCCCceEEEeCCCCCchhhhhcccC
Q 021753 21 ANWQGRLNTIKADAEGSKESIYTSKVKYMLKKGKPFIWVPE-----KDMHNVNTIIDERGSFAVASPTPGPLAKLLHSIK 95 (308)
Q Consensus 21 ~~~~~~LaT~~~~~~G~~g~P~~S~v~y~~d~G~p~~~vs~-----~a~Ht~nl~~dpr~SL~v~~~~~~~l~~~~~~~~ 95 (308)
......|.|..+. .|.|+.+.+.|+.++|..++..|. ...-.+||.++|+++|.+...
T Consensus 14 g~p~~~Ltt~GRk----SG~pr~tPv~~~~~g~~~~vvas~~G~~~~p~W~~Nl~A~P~v~v~~~~~------------- 76 (122)
T 3r5l_A 14 KIPVALLTTTGRK----TGQPRVNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKE------------- 76 (122)
T ss_dssp SCCCEEEEEECTT----TCSEEEEEEEEEEETTEEEEECSCCGGGCSCHHHHHHHHCCEEEEEETTE-------------
T ss_pred CCcEEEEEEcCCC----CCCEEEEEEEEEEECCEEEEEEecCCCCCCCHHHHhhccCCcEEEEECCE-------------
Confidence 3456788888642 259999999999887777665553 235589999999999987531
Q ss_pred CCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhh
Q 021753 96 KIPTRVALSGDIAPLKSEKAQLAAECLKEVMLS 128 (308)
Q Consensus 96 ~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~ 128 (308)
+..+.+..+++++... +.+++.+
T Consensus 77 ------~~~~~A~~l~~~Er~~----~~~~~~~ 99 (122)
T 3r5l_A 77 ------VLDLTARDATDEERAE----YWPQLVT 99 (122)
T ss_dssp ------EEEEEEEECCHHHHHH----HHHHHHH
T ss_pred ------EEEEEEEECCcchHHH----HHHHHHH
Confidence 2346677787665533 4444444
No 47
>3r5z_A Putative uncharacterized protein; split barrel-like fold, DUF385, deazaflavin-dependent reduct F420-dependent reductase, FDR; HET: F42; 1.50A {Nocardia farcinica}
Probab=95.35 E-value=0.25 Score=41.17 Aligned_cols=99 Identities=8% Similarity=-0.007 Sum_probs=65.7
Q ss_pred eEEeeeccCCCCCCCceeeeeeeeEecCCeEEEEecCC-----chhhcccccCCCceEEEeCCCCCchhhhhcccCCCCc
Q 021753 25 GRLNTIKADAEGSKESIYTSKVKYMLKKGKPFIWVPEK-----DMHNVNTIIDERGSFAVASPTPGPLAKLLHSIKKIPT 99 (308)
Q Consensus 25 ~~LaT~~~~~~G~~g~P~~S~v~y~~d~G~p~~~vs~~-----a~Ht~nl~~dpr~SL~v~~~~~~~l~~~~~~~~~~~~ 99 (308)
..|.|..+. . |.|+.+.+.|+.++|..++..|.. ..-.+||.++|++.+.+...
T Consensus 40 ~lLtt~GRk-S---G~~r~tPl~~~~~~~~~~vVas~gG~~~~p~W~~Nl~A~p~v~v~~g~~----------------- 98 (145)
T 3r5z_A 40 VVLTTKGAK-T---GKLRKTPLMRVEHNGEYAVVASLGGAPKHPVWYHNIKAEPHVELRDGTE----------------- 98 (145)
T ss_dssp EEEEEECTT-T---CCEEEEEEECEEETTEEEEECCBTTBSSCCHHHHHHHHCCEEEEEETTE-----------------
T ss_pred EEEEEcCCC-C---CCEEEEEEEEEEECCEEEEEEcCCCCCCCChHHHHhhhCCcEEEEECCE-----------------
Confidence 456665432 1 699999999998888877766653 26678999999999887431
Q ss_pred EEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchhhhhc-cCCCeEEEEEEE
Q 021753 100 RVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLKDLLD-EREKYVVYKFNI 175 (308)
Q Consensus 100 Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~~~ld-~~~df~~~rL~~ 175 (308)
+..+.+..++++|.. ++.+++.+ .+|.-..|-. ..-..-+|+|+|
T Consensus 99 --~~~~~Ar~~~~~Er~----~~w~~~~~-------------------------~~p~y~~Yq~~t~R~iPv~~L~p 144 (145)
T 3r5z_A 99 --VGDYTAREVTGEEKR----VWWERAVE-------------------------VWPDYAEYQTKTTREIPVFVLTP 144 (145)
T ss_dssp --EEEEEEEECCHHHHH----HHHHHHHH-------------------------HCTHHHHHGGGCSSCCCEEEEEE
T ss_pred --EEEEEEEECCchHHH----HHHHHHHH-------------------------HCcCHHHHHHhcCCcCceEEEEe
Confidence 234567778776553 34555555 5565555554 234666777776
No 48
>3r5y_A Putative uncharacterized protein; PA-824, nitroimidazoles, split barrel-like fold, DUF385, DEA dependent nitroreductase, unknown function; HET: F42; 1.80A {Nocardia farcinica}
Probab=95.01 E-value=0.13 Score=42.91 Aligned_cols=78 Identities=14% Similarity=0.074 Sum_probs=53.3
Q ss_pred ceEEeeeccCCCCCCCceeeeeeeeEecCCeEEEEecCC-----chhhcccccCCCceEEEeCCCCCchhhhhcccCCCC
Q 021753 24 QGRLNTIKADAEGSKESIYTSKVKYMLKKGKPFIWVPEK-----DMHNVNTIIDERGSFAVASPTPGPLAKLLHSIKKIP 98 (308)
Q Consensus 24 ~~~LaT~~~~~~G~~g~P~~S~v~y~~d~G~p~~~vs~~-----a~Ht~nl~~dpr~SL~v~~~~~~~l~~~~~~~~~~~ 98 (308)
...|.|..+. .|.|+.+.+.|+.++|..++..|.- ..-.+||.++|++.|.+...
T Consensus 41 ~~lLtt~GRk----SG~~r~tPl~~~~~~g~~~vVas~gG~~~~p~W~~Nl~A~p~v~v~~g~~---------------- 100 (147)
T 3r5y_A 41 LVILTTVGRK----TGALRKTPVMRVEHDGRYAVVASQGGAPTHPAWYFNLVADPRAQLRDKDA---------------- 100 (147)
T ss_dssp EEEEEEECTT----TCCEEEEEEECCEETTEEEEECCGGGCSSCCHHHHHHHHCCEEEEEETTE----------------
T ss_pred EEEEEEcCCC----CCCEEEEEEEEEEECCEEEEEEcCCCCCCCChHHHhhhhCCcEEEEECCE----------------
Confidence 3456666432 1699999999998888876666542 36788999999998876431
Q ss_pred cEEEEEEEEEEcCchhHHHHHHHHHHHHhh
Q 021753 99 TRVALSGDIAPLKSEKAQLAAECLKEVMLS 128 (308)
Q Consensus 99 ~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~ 128 (308)
+..+.+..++++|.. ++.+++.+
T Consensus 101 ---~~~~~Ar~~~~~Er~----~~w~~~~~ 123 (147)
T 3r5y_A 101 ---VLSVVARELAGPERA----EWWERAVR 123 (147)
T ss_dssp ---EEEEEEEECCHHHHH----HHHHHHHH
T ss_pred ---EEEEEEEECCchHHH----HHHHHHHH
Confidence 234667778776553 34555555
No 49
>3h96_A F420-H2 dependent reductase A; pnpox, flavin, aflatoxin, flavoprotein; 2.00A {Mycobacterium smegmatis str}
Probab=94.94 E-value=0.13 Score=42.71 Aligned_cols=101 Identities=8% Similarity=0.099 Sum_probs=68.8
Q ss_pred CceEEeeeccCCCCCCCceeeeeeeeEecC---CeEEEEecC-----CchhhcccccCCCceEEEeCCCCCchhhhhccc
Q 021753 23 WQGRLNTIKADAEGSKESIYTSKVKYMLKK---GKPFIWVPE-----KDMHNVNTIIDERGSFAVASPTPGPLAKLLHSI 94 (308)
Q Consensus 23 ~~~~LaT~~~~~~G~~g~P~~S~v~y~~d~---G~p~~~vs~-----~a~Ht~nl~~dpr~SL~v~~~~~~~l~~~~~~~ 94 (308)
....|.|..+. .|.|+.+.+.|+.++ |..++..|. ...-.+||.++|++.+.+...
T Consensus 31 ~~llLtt~GRk----SG~~r~tPl~~~~~g~~~~~~~vvas~gG~~~~p~W~~Nl~A~p~v~v~~g~~------------ 94 (143)
T 3h96_A 31 PMVLVHHVGRK----TGKAAVTPMMYLPSDDDPGTIYVFASKAGAASNPAWYYNLTTAGTAQVEVGTE------------ 94 (143)
T ss_dssp CEEEEEEECTT----TCCEEEEEEECEECSSCTTEEEEECCGGGCSSCCHHHHHHHHHSEEEEEETTE------------
T ss_pred cEEEEEEcCCC----CCCEEEEEEEEEEecCcCCcEEEEEcCCCCCCCChHHHhhhhCCcEEEEECCE------------
Confidence 44577776542 159999999999886 776666664 357789999999999877431
Q ss_pred CCCCcEEEEEEEEEEcCchhHHHHHHHHHHHHhhhhhhhccccccccccccCCccccccCCcchhhhhc-cC--CCeEEE
Q 021753 95 KKIPTRVALSGDIAPLKSEKAQLAAECLKEVMLSEQRVIGESSYTVSGVLSSSNFITTSRNENLKDLLD-ER--EKYVVY 171 (308)
Q Consensus 95 ~~~~~Rvtl~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rhp~~~~~ld-~~--~df~~~ 171 (308)
++.+.+..++++|.. ++.+++.+ ++|.-..|-. .. -..-+|
T Consensus 95 -------~~~~~A~~~~~~Er~----~~~~~~~~-------------------------~~P~y~~Yq~~t~~~R~iPv~ 138 (143)
T 3h96_A 95 -------TYAVGVTEVTGEDRD----RIYSEQAR-------------------------RYPGFADYEKKTAGIRTIPVL 138 (143)
T ss_dssp -------EEEEEEEEECHHHHH----HHHHHHHH-------------------------HCTHHHHHHHHTTTTCCCCEE
T ss_pred -------EEEEEEEecCchHHH----HHHHHHHH-------------------------HCcCHHHHHHhcCCCCcccEE
Confidence 234566777765543 35566666 6676666655 22 367788
Q ss_pred EEEE
Q 021753 172 KFNI 175 (308)
Q Consensus 172 rL~~ 175 (308)
+|+|
T Consensus 139 ~L~p 142 (143)
T 3h96_A 139 ALTR 142 (143)
T ss_dssp EEEE
T ss_pred EEee
Confidence 8876
No 50
>3a6r_A FMN-binding protein; electron transport, flavoprotein; HET: FMN; 1.20A {Desulfovibrio vulgaris} PDB: 1axj_A* 1flm_A* 3awh_A* 3amf_A* 3a6q_A* 1wll_A* 3a20_A* 1wli_A* 1wlk_A* 2e83_A*
Probab=92.40 E-value=0.24 Score=40.05 Aligned_cols=85 Identities=19% Similarity=0.122 Sum_probs=62.7
Q ss_pred HHHHHHHhhCCceEEeeeccCCCCCCCceeeee--eeeE--ecCCeEEEEecCCchhhcccccCCCceEEEeCCCC----
Q 021753 13 EKCKNILAANWQGRLNTIKADAEGSKESIYTSK--VKYM--LKKGKPFIWVPEKDMHNVNTIIDERGSFAVASPTP---- 84 (308)
Q Consensus 13 e~aRtll~~~~~~~LaT~~~~~~G~~g~P~~S~--v~y~--~d~G~p~~~vs~~a~Ht~nl~~dpr~SL~v~~~~~---- 84 (308)
|..+.++.......|+|.+ +| .|+..- ..|+ +||.+.+|....+..+-.||..||++++.|...+-
T Consensus 4 e~~~e~l~~~~~~~iaT~~---~g---~Pnvvptw~~~~~v~dD~~ili~~~~~~kT~~Nl~~N~kvai~v~~~e~~g~~ 77 (122)
T 3a6r_A 4 GTFFEVLKNQGVVAIATQG---ED---GPHLVNTWNSYLKVLDGNRIVVPVGGMHKTEANVARDERVLMTLGSRKVAGRN 77 (122)
T ss_dssp HHHHHHTTSCCEEEEEEEC---SS---SEEEEEEEGGGCEEETTTEEEEEESSCHHHHHHHHHCCEEEEEEEEEEEECSS
T ss_pred HHHHHHHhcCCeEEEEEcC---CC---CCcEEeeeceEEEEecCCEEEEEccccHHHHHHHhhCCeEEEEEEeccccccc
Confidence 4566667655567788875 24 788744 4554 57899999999999999999999999999986541
Q ss_pred CchhhhhcccCCCCcEEEEEEEEEEcCchh
Q 021753 85 GPLAKLLHSIKKIPTRVALSGDIAPLKSEK 114 (308)
Q Consensus 85 ~~l~~~~~~~~~~~~Rvtl~G~~~~v~~~~ 114 (308)
++. .-..+.|+++-+.+.+
T Consensus 78 g~~-----------~gf~ikGta~~~~~G~ 96 (122)
T 3a6r_A 78 GPG-----------TGFLIRGSAAFRTDGP 96 (122)
T ss_dssp SEE-----------EEEEEEEEEEEESSSH
T ss_pred CCC-----------ceEEEEEEEEEEeccH
Confidence 111 2467789999997653
No 51
>1unn_C POL IV, DNA polymerase IV; beta-clamp, translesion, transferase, DNA-directed D polymerase, DNA replication; HET: DNA; 1.9A {Escherichia coli} SCOP: d.240.1.1
Probab=40.25 E-value=13 Score=28.59 Aligned_cols=31 Identities=16% Similarity=0.242 Sum_probs=28.1
Q ss_pred eeCCCcCCCHHHHHHHHHHHHHHHHhhhccC
Q 021753 274 FTFKEEAHDVESFCSQLAQMEEEVVRKVSGF 304 (308)
Q Consensus 274 l~F~~pv~~~~~~~~~l~~l~~~A~~~~~~~ 304 (308)
-.|++.+.|.++++..|..|++++...+|+-
T Consensus 11 ~Tf~~d~~~~~~l~~~l~~l~~~v~~rLr~~ 41 (115)
T 1unn_C 11 RTMAEDIHHWSECEAIIERLYPELERRLAKV 41 (115)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eECCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 4688999999999999999999999999863
Done!