Your job contains 1 sequence.
>021756
MNRGIEILSPASYLENSNWLFQESKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIP
GKTVGDVIKQYKELEEDVSDIEAGLIPIPGYGNDSFTLEWVDSNQGYDGLKNFYGPGGKR
GSSTRPSDQERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKY
FNRQLTGGKDKRRSSIHDITTVNLDETATSSSENNKPPSPSPSAAVIQLQQQPKTVDMSN
EQFNWKSQNEGTAMLFNSMNGTAFMAPFCGISSYGPKLQEQNLLGGNLNGSQFGAYSAYF
QMQSMQHQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021756
(308 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2042872 - symbol:AT2G38090 species:3702 "Arabi... 925 7.0e-93 1
UNIPROTKB|Q8S9H7 - symbol:DIVARICATA "Transcription facto... 854 2.4e-85 1
TAIR|locus:2154508 - symbol:AT5G58900 species:3702 "Arabi... 708 7.0e-70 1
TAIR|locus:2150149 - symbol:AT5G01200 species:3702 "Arabi... 662 5.2e-65 1
TAIR|locus:2166459 - symbol:AT5G05790 species:3702 "Arabi... 612 1.0e-59 1
TAIR|locus:2074723 - symbol:AT3G11280 species:3702 "Arabi... 600 1.9e-58 1
TAIR|locus:2028461 - symbol:AT1G49010 species:3702 "Arabi... 339 8.6e-45 2
TAIR|locus:2159607 - symbol:AT5G08520 species:3702 "Arabi... 465 3.9e-44 1
TAIR|locus:2175478 - symbol:AT5G04760 species:3702 "Arabi... 421 1.8e-39 1
TAIR|locus:2171711 - symbol:AT5G23650 species:3702 "Arabi... 387 2.2e-38 2
TAIR|locus:2075775 - symbol:AT3G10580 species:3702 "Arabi... 236 3.2e-28 2
TAIR|locus:2133667 - symbol:AT4G09450 species:3702 "Arabi... 238 3.6e-27 2
TAIR|locus:2094942 - symbol:AT3G16350 species:3702 "Arabi... 297 2.5e-26 1
TAIR|locus:2171519 - symbol:AT5G47390 species:3702 "Arabi... 293 6.6e-26 1
TAIR|locus:2020653 - symbol:AT1G70000 species:3702 "Arabi... 278 2.6e-24 1
TAIR|locus:2011216 - symbol:AT1G19000 species:3702 "Arabi... 276 4.2e-24 1
TAIR|locus:2165106 - symbol:AT5G56840 species:3702 "Arabi... 272 1.1e-23 1
TAIR|locus:2151621 - symbol:AT5G61620 species:3702 "Arabi... 270 1.8e-23 1
TAIR|locus:2027181 - symbol:AT1G74840 species:3702 "Arabi... 267 3.8e-23 1
TAIR|locus:2075760 - symbol:AT3G10590 species:3702 "Arabi... 238 4.4e-20 1
UNIPROTKB|Q58FS3 - symbol:RAD "Transcription factor RADIA... 196 1.3e-15 1
TAIR|locus:2025182 - symbol:RL6 "RAD-like 6" species:3702... 192 3.3e-15 1
TAIR|locus:4010713631 - symbol:RL4 "RAD-like 4" species:3... 185 1.9e-14 1
TAIR|locus:2016417 - symbol:RL5 "RAD-like 5" species:3702... 184 2.5e-14 1
TAIR|locus:2136283 - symbol:RL1 "RAD-like 1" species:3702... 184 2.5e-14 1
TAIR|locus:2115260 - symbol:RL3 "RAD-like 3" species:3702... 183 3.2e-14 1
TAIR|locus:2049374 - symbol:MEE3 "MATERNAL EFFECT EMBRYO ... 177 1.7e-13 1
DICTYBASE|DDB_G0274463 - symbol:mybJ "myb domain-containi... 192 1.1e-12 1
TAIR|locus:504955890 - symbol:AT3G10595 species:3702 "Ara... 107 7.3e-10 2
TAIR|locus:2171494 - symbol:AT5G47290 "AT5G47290" species... 99 2.2e-07 2
DICTYBASE|DDB_G0289151 - symbol:mybI "myb domain-containi... 143 1.0e-06 2
UNIPROTKB|I3LNQ0 - symbol:I3LNQ0 "Uncharacterized protein... 139 1.2e-06 1
UNIPROTKB|I3LSN5 - symbol:I3LSN5 "Uncharacterized protein... 139 1.3e-06 1
UNIPROTKB|Q1RMH9 - symbol:DNAJC2 "DnaJ homolog subfamily ... 139 1.7e-06 1
UNIPROTKB|Q99543 - symbol:DNAJC2 "DnaJ homolog subfamily ... 139 1.7e-06 1
UNIPROTKB|F1SB54 - symbol:DNAJC2 "Uncharacterized protein... 139 1.7e-06 1
UNIPROTKB|Q4R8H2 - symbol:DNAJC2 "DnaJ homolog subfamily ... 139 1.7e-06 1
UNIPROTKB|E2RS54 - symbol:DNAJC2 "Uncharacterized protein... 139 1.7e-06 1
UNIPROTKB|F1P3V8 - symbol:DNAJC2 "Uncharacterized protein... 136 3.7e-06 1
MGI|MGI:99470 - symbol:Dnajc2 "DnaJ (Hsp40) homolog, subf... 136 3.7e-06 1
TAIR|locus:2167210 - symbol:RVE1 "REVEILLE 1" species:370... 132 5.0e-06 1
TAIR|locus:504955668 - symbol:AT3G10113 species:3702 "Ara... 129 8.4e-06 1
TAIR|locus:2014114 - symbol:EPR1 "EARLY-PHYTOCHROME-RESPO... 129 1.0e-05 1
RGD|620524 - symbol:Dnajc2 "DnaJ (Hsp40) homolog, subfami... 132 1.1e-05 1
UNIPROTKB|Q6P2Y3 - symbol:dnajc2 "DnaJ homolog subfamily ... 131 1.4e-05 1
DICTYBASE|DDB_G0277927 - symbol:mybH "SWIRM domain-contai... 121 5.0e-05 3
TAIR|locus:2075049 - symbol:RVE8 "REVEILLE 8" species:370... 121 5.3e-05 1
TAIR|locus:2025411 - symbol:ASG4 "ALTERED SEED GERMINATIO... 119 8.3e-05 1
TAIR|locus:2169135 - symbol:RVE2 "REVEILLE 2" species:370... 118 0.00011 1
DICTYBASE|DDB_G0288783 - symbol:mybG "myb domain-containi... 119 0.00017 1
TAIR|locus:2044345 - symbol:CCA1 "circadian clock associa... 120 0.00023 1
ZFIN|ZDB-GENE-040426-1912 - symbol:dnajc2 "DnaJ (Hsp40) h... 120 0.00024 1
TAIR|locus:2124928 - symbol:AT4G01280 species:3702 "Arabi... 115 0.00027 1
TAIR|locus:2151251 - symbol:LCL1 "LHY/CCA1-like 1" specie... 114 0.00033 1
TAIR|locus:2149589 - symbol:AT5G52660 species:3702 "Arabi... 112 0.00071 1
TAIR|locus:2200970 - symbol:LHY "LATE ELONGATED HYPOCOTYL... 115 0.00091 1
>TAIR|locus:2042872 [details] [associations]
symbol:AT2G38090 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002685 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT006122 EMBL:AY519529
EMBL:AK118135 IPI:IPI00542058 RefSeq:NP_181344.2 UniGene:At.46819
ProteinModelPortal:Q8GXN7 SMR:Q8GXN7 EnsemblPlants:AT2G38090.1
GeneID:818387 KEGG:ath:AT2G38090 TAIR:At2g38090
HOGENOM:HOG000237920 InParanoid:Q8GXN7 OMA:HRQFLMG PhylomeDB:Q8GXN7
ProtClustDB:CLSN2918198 Genevestigator:Q8GXN7 Uniprot:Q8GXN7
Length = 298
Score = 925 (330.7 bits), Expect = 7.0e-93, P = 7.0e-93
Identities = 190/312 (60%), Positives = 220/312 (70%)
Query: 1 MNRGIEILSPASYLENSNWLFQESKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIP 60
MNRGIE++SPA+YLE SNWLFQE++GTKWT +ENK+FENALA YDKDTPDRW +VAAM+P
Sbjct: 1 MNRGIEVMSPATYLETSNWLFQENRGTKWTAEENKKFENALAFYDKDTPDRWSRVAAMLP 60
Query: 61 GKTVGDVIKQYKELEEDVSDIEAGLIPIPGYGNDSFTLEW--VDSNQGYDG--LKNFY-- 114
GKTVGDVIKQY+ELEEDVSDIEAGLIPIPGY +DSFTL+W D G +G + +Y
Sbjct: 61 GKTVGDVIKQYRELEEDVSDIEAGLIPIPGYASDSFTLDWGGYDGASGNNGFNMNGYYFS 120
Query: 115 GPGGKRGSSTRPSDQERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVA 174
GGKRGS+ R ++ ERKKGVPWTEEEHRQFLMGLKK+GKGDWRNI+RNFVTTRTPTQVA
Sbjct: 121 AAGGKRGSAARTAEHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVA 180
Query: 175 SHAQKYFNRQLTGGKDKRRSSIHDITTVNLDETATXXXXXXXXXXXXXXAAVIQLQQQPK 234
SHAQKYF RQ+ GGKDKRRSSIHDITTVN+ ++ P
Sbjct: 181 SHAQKYFIRQVNGGKDKRRSSIHDITTVNIPDSPDAAAADNATANAPCSP--------PS 232
Query: 235 TVDMSNEQFNWKSQN--EGTAMLFNSMNGTAFMAPFCGISS--YGPKLQEQXXXXXXXXX 290
E W+ Q + TA F + N AF G+SS Y KLQEQ
Sbjct: 233 VGGNQRETSEWEGQTLYDETAAAFYNQN--AFSETLLGMSSTPYMAKLQEQSFLNA---- 286
Query: 291 SQFGAYSAYFQM 302
SQF +Y+AY QM
Sbjct: 287 SQFESYNAYLQM 298
>UNIPROTKB|Q8S9H7 [details] [associations]
symbol:DIVARICATA "Transcription factor DIVARICATA"
species:4151 "Antirrhinum majus" [GO:0009908 "flower development"
evidence=IMP] [GO:0048262 "determination of dorsal/ventral
asymmetry" evidence=IMP] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0009908
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 GO:GO:0048262 EMBL:AY077453
ProteinModelPortal:Q8S9H7 Uniprot:Q8S9H7
Length = 307
Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
Identities = 172/308 (55%), Positives = 212/308 (68%)
Query: 5 IEILSPASYLENSNWLFQESKGT-KWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKT 63
+EIL+P+SY +S+W +ES+ T +WT ENK FENALAV+D++TP+RW +VA +PGKT
Sbjct: 1 MEILAPSSYFSSSSWFLEESRSTTRWTAAENKAFENALAVFDENTPNRWERVAERVPGKT 60
Query: 64 VGDVIKQYKELEEDVSDIEAGLIPIPGYGNDS-FTLEWVDSNQGYDGLKNFYGPGGKRGS 122
VGDV++QYKELE+DVS IEAG +P+PGY S FTLEW S G+DG K YG GG++ S
Sbjct: 61 VGDVMRQYKELEDDVSSIEAGFVPVPGYSTSSPFTLEW-GSGHGFDGFKQSYGTGGRKSS 119
Query: 123 STRPSDQERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFN 182
S RPS+QERKKGVPWTEEEH+ FLMGLKK+GKGDWRNISRNFV TRTPTQVASHAQKYF
Sbjct: 120 SGRPSEQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFI 179
Query: 183 RQLTGGKDKRRSSIHDITTVNLDETATXXXXXXXXXXXXXXAAVIQLQQQPKTVDMSNEQ 242
RQL+GGKDKRR+SIHDITTVNL + T + QQQ + +
Sbjct: 180 RQLSGGKDKRRASIHDITTVNLSDNQTPSPDNKKPPSSPDHSMA---QQQTSSTSIHKLP 236
Query: 243 FNWKSQNEGTAMLFNSM--NGTAFMA-PFCGISSYGPKLQEQXXXXXXXXXSQFGAYSAY 299
F W + T M F S +G F + PF G++SYG K+Q Q + G+ +
Sbjct: 237 FQWDQTSNETIMGFASSGHHGNMFQSNPF-GMNSYGFKMQGQQMQRGGFCDTYLGSQNMA 295
Query: 300 FQMQSMQH 307
FQMQS H
Sbjct: 296 FQMQSGLH 303
>TAIR|locus:2154508 [details] [associations]
symbol:AT5G58900 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB016885
HOGENOM:HOG000237920 EMBL:BT005473 EMBL:AY519533 EMBL:AK118891
IPI:IPI00547099 RefSeq:NP_200698.1 UniGene:At.7757
ProteinModelPortal:Q9FIL9 SMR:Q9FIL9 DNASU:836007
EnsemblPlants:AT5G58900.1 GeneID:836007 KEGG:ath:AT5G58900
TAIR:At5g58900 eggNOG:NOG325121 InParanoid:Q9FIL9 OMA:PFTLDWA
PhylomeDB:Q9FIL9 ProtClustDB:CLSN2914846 ArrayExpress:Q9FIL9
Genevestigator:Q9FIL9 Uniprot:Q9FIL9
Length = 288
Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
Identities = 155/283 (54%), Positives = 186/283 (65%)
Query: 5 IEILSPA-SYLENSNWLFQESK--------GTKWTPQENKQFENALAVYDKDTPDRWIKV 55
+E++ P+ S++ NWL +E+K G WT ENK FENALAVYD +TPDRW KV
Sbjct: 1 MEVMRPSTSHVSGGNWLMEETKSGVAASGEGATWTAAENKAFENALAVYDDNTPDRWQKV 60
Query: 56 AAMIPGKTVGDVIKQYKELEEDVSDIEAGLIPIPGY-GNDSFTLEWVDSNQGYDGLKNFY 114
AA+IPGKTV DVI+QY +LE DVS IEAGLIP+PGY + FTL+W G +G K +
Sbjct: 61 AAVIPGKTVSDVIRQYNDLEADVSSIEAGLIPVPGYITSPPFTLDWAGGGGGCNGFKPGH 120
Query: 115 GPGGKRGSSTRPSDQERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVA 174
KR + R + ERKKGVPWTEEEH+ FLMGLKK+GKGDWRNISRNFV TRTPTQVA
Sbjct: 121 QVCNKRSQAGRSPELERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVA 180
Query: 175 SHAQKYFNRQLTGGKDKRRSSIHDITTVNLDETATXXXXXXXXXXXXXXAAVIQLQQQPK 234
SHAQKYF RQL+GGKDKRR+SIHDITTVNL+E A+ + V+ Q+
Sbjct: 181 SHAQKYFIRQLSGGKDKRRASIHDITTVNLEEEASLETNKS--------SIVVGDQRSRL 232
Query: 235 TVDMSNEQFNW-KSQNEGT-AMLFNSMNGTAFMAPFCGISSYG 275
T F W ++ N GT A FN G A G+ SYG
Sbjct: 233 TA------FPWNQTDNNGTQADAFNITIGNAIS----GVHSYG 265
>TAIR|locus:2150149 [details] [associations]
symbol:AT5G01200 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL137189
HOGENOM:HOG000237920 EMBL:AY519530 IPI:IPI00517812 PIR:T45960
RefSeq:NP_195740.1 UniGene:At.27639 ProteinModelPortal:Q9LFB6
SMR:Q9LFB6 EnsemblPlants:AT5G01200.1 GeneID:831676
KEGG:ath:AT5G01200 TAIR:At5g01200 eggNOG:NOG260690
InParanoid:Q9LFB6 OMA:SAANSDY PhylomeDB:Q9LFB6
ProtClustDB:CLSN2916637 ArrayExpress:Q9LFB6 Genevestigator:Q9LFB6
Uniprot:Q9LFB6
Length = 267
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 145/251 (57%), Positives = 173/251 (68%)
Query: 1 MNRGIEILSPASYLENSNWLFQESKGTKWTPQENKQFENALAVYD-KDTPDRWIKVAAMI 59
M RG+ + SPA N+NW+FQE + WT +ENK+FE ALA D KD + W K+A +I
Sbjct: 6 MYRGVNMFSPA----NTNWIFQEVREATWTAEENKRFEKALAYLDDKDNLESWSKIADLI 61
Query: 60 PGKTVGDVIKQYKELEEDVSDIEAGLIPIPGYGNDSFTLEWVDSNQGYD-GLKNF-YG-- 115
PGKTV DVIK+YKELE+DVSDIEAGLIPIPGYG D+ + +N Y GL+N YG
Sbjct: 62 PGKTVADVIKRYKELEDDVSDIEAGLIPIPGYGGDASSA----ANSDYFFGLENSSYGYD 117
Query: 116 --PGGKRGS--------STRPSDQERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFV 165
GGKR S S P ++ERKKGVPWTE+EH +FLMGLKK+GKGDWRNI+++FV
Sbjct: 118 YVVGGKRSSPAMTDCFRSPMP-EKERKKGVPWTEDEHLRFLMGLKKYGKGDWRNIAKSFV 176
Query: 166 TTRTPTQVASHAQKYFNRQLTGGKDKRRSSIHDITTVNL---DETATXXXXXXXXXXXXX 222
TTRTPTQVASHAQKYF RQLT GKDKRRSSIHDITTVN+ D +AT
Sbjct: 177 TTRTPTQVASHAQKYFLRQLTDGKDKRRSSIHDITTVNIPDADASATATTADVALSPTPA 236
Query: 223 XAAVIQLQQQP 233
+ + LQ P
Sbjct: 237 NSFDVFLQPNP 247
>TAIR|locus:2166459 [details] [associations]
symbol:AT5G05790 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB005237
HOGENOM:HOG000237920 ProtClustDB:CLSN2684400 EMBL:AY519531
EMBL:BT026054 IPI:IPI00544524 RefSeq:NP_196198.1 UniGene:At.32952
ProteinModelPortal:Q9FFJ9 SMR:Q9FFJ9 EnsemblPlants:AT5G05790.1
GeneID:830464 KEGG:ath:AT5G05790 TAIR:At5g05790 eggNOG:NOG242423
InParanoid:Q9FFJ9 OMA:ISRNFVG PhylomeDB:Q9FFJ9 ArrayExpress:Q9FFJ9
Genevestigator:Q9FFJ9 Uniprot:Q9FFJ9
Length = 277
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 125/207 (60%), Positives = 154/207 (74%)
Query: 5 IEILSPA-SYLENSNWLF--QES---KGTKWTPQENKQFENALAVYDKDTPDRWIKVAAM 58
+E L P S++ S+ F QE + + WT +ENK+FE ALAVY DTPDRW KVAAM
Sbjct: 1 METLHPLLSHVPTSDHRFVVQEMMCLQSSSWTKEENKKFERALAVYADDTPDRWFKVAAM 60
Query: 59 IPGKTVGDVIKQYKELEEDVSDIEAGLIPIPGYGNDS-FTLEWVDSNQGYDGLKNFYGPG 117
IPGKT+ DV++QY +LEED+ DIEAGL+PIPGY + + + V S + +D + P
Sbjct: 61 IPGKTISDVMRQYSKLEEDLFDIEAGLVPIPGYRSVTPCGFDQVVSPRDFDAYRKL--PN 118
Query: 118 GKRGSSTRPSDQERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHA 177
G RG DQ+R+KGVPWTEEEHR+FL+GL K+GKGDWRNISRNFV ++TPTQVASHA
Sbjct: 119 GARGF-----DQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHA 173
Query: 178 QKYFNRQLTGGKDKRRSSIHDITTVNL 204
QKY+ RQL+G KDKRR SIHDITTVNL
Sbjct: 174 QKYYQRQLSGAKDKRRPSIHDITTVNL 200
>TAIR|locus:2074723 [details] [associations]
symbol:AT3G11280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009751 "response to salicylic acid stimulus" evidence=IEP]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0019344 "cysteine biosynthetic process" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002686 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009739 InterPro:IPR017884 PROSITE:PS51293 EMBL:AC073395
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 UniGene:At.23548 EMBL:AY056180 EMBL:AY091265
EMBL:AY550308 IPI:IPI00541857 RefSeq:NP_187737.1 RefSeq:NP_850558.1
ProteinModelPortal:Q9C773 SMR:Q9C773 STRING:Q9C773 PRIDE:Q9C773
DNASU:820299 EnsemblPlants:AT3G11280.1 EnsemblPlants:AT3G11280.2
GeneID:820299 KEGG:ath:AT3G11280 TAIR:At3g11280 InParanoid:Q9C773
OMA:FEAAINF PhylomeDB:Q9C773 ProtClustDB:CLSN2684400
ArrayExpress:Q9C773 Genevestigator:Q9C773 Uniprot:Q9C773
Length = 263
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 128/208 (61%), Positives = 148/208 (71%)
Query: 5 IEILSPASYLENSNWLF--QE------SKGTKWTPQENKQFENALAVYDKDTPDRWIKVA 56
+E L P S+L S+ F QE S WT +ENK FE ALA+Y +D+PDRW KVA
Sbjct: 1 METLHPFSHLPISDHRFVVQEMVSLHSSSSGSWTKEENKMFERALAIYAEDSPDRWFKVA 60
Query: 57 AMIPGKTVGDVIKQYKELEEDVSDIEAGLIPIPGYGNDSFTLEWVDSNQGYDGLKNFYGP 116
+MIPGKTV DV+KQY +LEEDV DIEAG +PIPGY S L G+D P
Sbjct: 61 SMIPGKTVFDVMKQYSKLEEDVFDIEAGRVPIPGYPAASSPL-------GFDTDMCRKRP 113
Query: 117 GGKRGSSTRPSDQERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASH 176
G RGS DQ+RKKGVPWTEEEHR+FL+GL K+GKGDWRNISRNFV ++TPTQVASH
Sbjct: 114 SGARGS-----DQDRKKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVVSKTPTQVASH 168
Query: 177 AQKYFNRQLTGGKDKRRSSIHDITTVNL 204
AQKY+ RQL+G KDKRR SIHDITT NL
Sbjct: 169 AQKYYQRQLSGAKDKRRPSIHDITTGNL 196
>TAIR|locus:2028461 [details] [associations]
symbol:AT1G49010 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009651 "response
to salt stress" evidence=IEP] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0016556 "mRNA modification" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046686
GO:GO:0009733 GO:GO:0009753 GO:GO:0003677 GO:GO:0009651
GO:GO:0003700 GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009739 EMBL:AC016041 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237920
EMBL:AY086906 EMBL:AY519528 EMBL:BT024862 IPI:IPI00544296
PIR:F96527 RefSeq:NP_564537.1 UniGene:At.38318
ProteinModelPortal:Q9M9A3 SMR:Q9M9A3 STRING:Q9M9A3 PRIDE:Q9M9A3
EnsemblPlants:AT1G49010.1 GeneID:841324 KEGG:ath:AT1G49010
TAIR:At1g49010 eggNOG:NOG253185 InParanoid:Q9M9A3 OMA:YVVPVAY
PhylomeDB:Q9M9A3 ProtClustDB:CLSN2688585 ArrayExpress:Q9M9A3
Genevestigator:Q9M9A3 Uniprot:Q9M9A3
Length = 314
Score = 339 (124.4 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 66/100 (66%), Positives = 79/100 (79%)
Query: 104 NQGYDGLKNFYGPGGKRGSSTRPSDQERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRN 163
N G G+ + GG+ G S ++QER+KG+PWTEEEHR FL+GL KFGKGDWR+ISRN
Sbjct: 107 NPGTSGISS--SNGGRSGGSR--AEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRN 162
Query: 164 FVTTRTPTQVASHAQKYFNRQLTGGKDKRRSSIHDITTVN 203
FV +RTPTQVASHAQKYF R + +D+RRSSIHDITTVN
Sbjct: 163 FVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITTVN 202
Score = 149 (57.5 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 30/72 (41%), Positives = 47/72 (65%)
Query: 23 ESKGTKWTPQENKQFENALAVY---DKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDVS 79
ES W+ +E K FENA+A++ ++ T D+W K+++M+P K + +V K Y+ L EDV
Sbjct: 2 ESVVATWSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKHYQILLEDVK 61
Query: 80 DIEAGLIPIPGY 91
IE G +P+P Y
Sbjct: 62 AIENGQVPLPRY 73
>TAIR|locus:2159607 [details] [associations]
symbol:AT5G08520 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB006697
HOGENOM:HOG000237920 EMBL:AY072090 EMBL:AY096571 EMBL:AY519532
IPI:IPI00516280 RefSeq:NP_196469.1 UniGene:At.8762
ProteinModelPortal:Q9FNN6 SMR:Q9FNN6 STRING:Q9FNN6 PaxDb:Q9FNN6
PRIDE:Q9FNN6 EnsemblPlants:AT5G08520.1 GeneID:830751
KEGG:ath:AT5G08520 TAIR:At5g08520 eggNOG:NOG259915
InParanoid:Q9FNN6 OMA:NSMNRER PhylomeDB:Q9FNN6
ProtClustDB:CLSN2687300 ArrayExpress:Q9FNN6 Genevestigator:Q9FNN6
Uniprot:Q9FNN6
Length = 298
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 94/190 (49%), Positives = 129/190 (67%)
Query: 24 SKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDVSDIEA 83
S G+ W+ +++ FE ALA ++ +RW K+AA +PGK+V + + Y+ L EDV+ IE+
Sbjct: 7 SDGSVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVEDVTRIES 66
Query: 84 GLIPIPGYGNDSFTLEWVDSNQGYDGLKNFYGPGGKRGSSTRP----SDQERKKGVPWTE 139
G +P+P YG+ E + + G +G + G G S + SDQER+KG+ WTE
Sbjct: 67 GCVPLPAYGSP----EGSNGHAGDEGASSKKGGNSHAGESNQAGKSKSDQERRKGIAWTE 122
Query: 140 EEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNRQLTGGKDKRRSSIHDI 199
+EHR FL+GL K+GKGDWR+ISRNFV TRTPTQVASHAQKYF R + KD+RRSSIHDI
Sbjct: 123 DEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDI 182
Query: 200 TTVNLDETAT 209
T+V + +T
Sbjct: 183 TSVGNADVST 192
>TAIR|locus:2175478 [details] [associations]
symbol:AT5G04760 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010286 "heat acclimation" evidence=RCA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL162972
EMBL:AB008271 UniGene:At.20111 UniGene:At.68528
HOGENOM:HOG000237920 EMBL:AY050976 EMBL:AY091177 EMBL:AY088362
EMBL:AB493736 IPI:IPI00530948 PIR:T48472 RefSeq:NP_196096.1
ProteinModelPortal:Q9LZ21 SMR:Q9LZ21 IntAct:Q9LZ21
EnsemblPlants:AT5G04760.1 GeneID:830354 KEGG:ath:AT5G04760
TAIR:At5g04760 eggNOG:NOG276102 InParanoid:Q9LZ21 OMA:WRNISRW
PhylomeDB:Q9LZ21 ProtClustDB:CLSN2686445 ArrayExpress:Q9LZ21
Genevestigator:Q9LZ21 Uniprot:Q9LZ21
Length = 215
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 92/218 (42%), Positives = 131/218 (60%)
Query: 27 TKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDVSDIEAGLI 86
++WT E+K FE AL ++ + +P+RW ++A + K+ G+V + Y+ L DV +I++G +
Sbjct: 4 SQWTRSEDKMFEQALVLFPEGSPNRWERIADQLH-KSAGEVREHYEVLVHDVFEIDSGRV 62
Query: 87 PIPGYGNDSFTLEWVDSNQGYDGLKNFYGPGGKRGSSTRPSDQERKKGVPWTEEEHRQFL 146
+P Y +DS + G+D G K G S ERK+G PWTE EH+ FL
Sbjct: 63 DVPDYMDDSAA-----AAAGWDSAGQI-SFGSKHGES------ERKRGTPWTENEHKLFL 110
Query: 147 MGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNRQLTGGKDKRRSSIHDITTVNLDE 206
+GLK++GKGDWR+ISRN V TRTPTQVASHAQKYF RQ + K+++RSSIHDITTV+
Sbjct: 111 IGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDITTVD--- 167
Query: 207 TATXXXXXXXXXXXXXXAAVIQLQQQPKTVDMSNEQFN 244
AT + +Q QQ + + +Q N
Sbjct: 168 -ATLAMPGSNMDWTGQHGSPVQAPQQQQIMSEFGQQLN 204
>TAIR|locus:2171711 [details] [associations]
symbol:AT5G23650 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB025633
HOGENOM:HOG000237920 EMBL:DQ056685 IPI:IPI00534696
RefSeq:NP_197754.1 UniGene:At.54959 ProteinModelPortal:Q9LT00
SMR:Q9LT00 EnsemblPlants:AT5G23650.1 GeneID:832430
KEGG:ath:AT5G23650 TAIR:At5g23650 eggNOG:NOG311780
InParanoid:Q9LT00 OMA:HYNILAR PhylomeDB:Q9LT00
ProtClustDB:CLSN2914851 Genevestigator:Q9LT00 Uniprot:Q9LT00
Length = 337
Score = 387 (141.3 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 90/188 (47%), Positives = 116/188 (61%)
Query: 20 LFQE-SKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDV 78
L QE S G+ W+ ++ FE ALA+Y+ T RW K+A ++PGKT+ VI+ Y L DV
Sbjct: 3 LGQEISVGSSWSKDDDIAFEKALAIYNDKTEIRWKKIATVVPGKTLEQVIEHYNILARDV 62
Query: 79 SDIEAGLIPIPGYGNDSFTLEWVDSNQGYDGLKNFYGPGG---KRGSSTRPSD---QERK 132
IE+G + +P Y D F LE + N G + GG K S + Q+R+
Sbjct: 63 MLIESGCVRLPDY--DDF-LE--EPNHNAFGKERSILEGGNDRKYESKHKGKSKLKQKRR 117
Query: 133 KGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNRQLTGGKDKR 192
+GVPW EHRQFL GLKK+GKGDWR+ISR+ V TRT TQVASHAQKYF + K ++
Sbjct: 118 RGVPWKPFEHRQFLHGLKKYGKGDWRSISRHCVVTRTSTQVASHAQKYFAHINSEDKKRK 177
Query: 193 RSSIHDIT 200
R SIHDIT
Sbjct: 178 RPSIHDIT 185
Score = 40 (19.1 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 9/42 (21%), Positives = 14/42 (33%)
Query: 234 KTVDMSNEQFNWKSQNEGTAMLFNSMNGTAFMAPFCGISSYG 275
K++ W+ N A N+ + P I YG
Sbjct: 190 KSISTKQRPITWQKINNNGATASNTQANQTTLQPSLDIPIYG 231
>TAIR|locus:2075775 [details] [associations]
symbol:AT3G10580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 EMBL:AC011560 EMBL:AC013428 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237920
ProtClustDB:CLSN2684024 IPI:IPI00530835 RefSeq:NP_187669.1
UniGene:At.53250 ProteinModelPortal:Q9SQY8 SMR:Q9SQY8
EnsemblPlants:AT3G10580.1 GeneID:820225 KEGG:ath:AT3G10580
TAIR:At3g10580 InParanoid:Q9SQY8 OMA:NIAQFLQ PhylomeDB:Q9SQY8
Genevestigator:Q9SQY8 Uniprot:Q9SQY8
Length = 287
Score = 236 (88.1 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 45/70 (64%), Positives = 55/70 (78%)
Query: 131 RKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNRQLTGGKD 190
+KKG+PW+ EEHR FL GL K+GKGDW++ISR VT+R+P QVASHAQKYF RQ K
Sbjct: 91 KKKGIPWSPEEHRLFLDGLNKYGKGDWKSISRECVTSRSPMQVASHAQKYFLRQKN--KK 148
Query: 191 KRRSSIHDIT 200
+R SIHD+T
Sbjct: 149 GKRFSIHDMT 158
Score = 94 (38.1 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 29 WTPQENKQFENALAVYDKD-TPDRWIKVAAMIPGKTVGDVIKQYKELEEDVSDIEAGLIP 87
W ++K+FE AL + + +PD +A + K + +V Y+ L +DV+ IE+G P
Sbjct: 8 WKRDDDKRFELALVRFPAEGSPDFLENIAQFLQ-KPLKEVYSYYQALVDDVTLIESGKYP 66
Query: 88 IPGYGNDSF 96
+P Y D +
Sbjct: 67 LPKYPEDDY 75
>TAIR|locus:2133667 [details] [associations]
symbol:AT4G09450 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL161514
HOGENOM:HOG000237920 EMBL:AY122911 IPI:IPI00520050 PIR:C85096
RefSeq:NP_192683.1 UniGene:At.33693 ProteinModelPortal:Q9M0P7
SMR:Q9M0P7 DNASU:826528 EnsemblPlants:AT4G09450.1 GeneID:826528
KEGG:ath:AT4G09450 TAIR:At4g09450 eggNOG:NOG301281
InParanoid:Q9M0P7 OMA:EGLNKFG PhylomeDB:Q9M0P7
ProtClustDB:CLSN2684024 Genevestigator:Q9M0P7 Uniprot:Q9M0P7
Length = 200
Score = 238 (88.8 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
Identities = 45/70 (64%), Positives = 53/70 (75%)
Query: 131 RKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNRQLTGGKD 190
+K G+PW+EEE R FL GL KFGKGDW+NISR V +RT TQVASHAQKYF RQ +
Sbjct: 87 KKTGIPWSEEEQRLFLEGLNKFGKGDWKNISRYCVKSRTSTQVASHAQKYFARQKQESTN 146
Query: 191 KRRSSIHDIT 200
+R SIHD+T
Sbjct: 147 TKRPSIHDMT 156
Score = 82 (33.9 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 28 KWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDVSDIEAGLIP 87
+WT ++K+FE AL + +P+ +I+ A K V +V Y L D+ IE+G
Sbjct: 6 QWTRVDDKRFELALLQIPEGSPN-FIENIAYYLQKPVKEVEYYYCALVHDIERIESGKYV 64
Query: 88 IPGYGNDSF 96
+P Y D +
Sbjct: 65 LPKYPEDDY 73
>TAIR|locus:2094942 [details] [associations]
symbol:AT3G16350 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
InterPro:IPR001005 InterPro:IPR001878 InterPro:IPR009057
Pfam:PF00249 SMART:SM00343 SMART:SM00717 GO:GO:0046686
EMBL:CP002686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0008270 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:BT005832 IPI:IPI00535787 RefSeq:NP_188256.1
UniGene:At.47678 ProteinModelPortal:Q84TG2 SMR:Q84TG2 PRIDE:Q84TG2
EnsemblPlants:AT3G16350.1 GeneID:820882 KEGG:ath:AT3G16350
TAIR:At3g16350 InParanoid:Q84TG2 OMA:GMATRHE PhylomeDB:Q84TG2
ProtClustDB:CLSN2913348 Genevestigator:Q84TG2 Uniprot:Q84TG2
Length = 387
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 64/106 (60%), Positives = 75/106 (70%)
Query: 104 NQGYDGLKNFYGPGGKRGSSTRPSDQERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRN 163
N+GY L + P GSS R ERK+GVPWTEEEHR FL+GL+K GKGDWR ISRN
Sbjct: 112 NEGY--LSD--DPAHGSGSSHRRG--ERKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRN 165
Query: 164 FVTTRTPTQVASHAQKYFNRQLTGGKDKRRSSIHDITTVNLDETAT 209
+VT+RTPTQVASHAQKYF R + + KRRSS+ D+ T DE T
Sbjct: 166 YVTSRTPTQVASHAQKYFIRHTSSSRRKRRSSLFDMVT---DEMVT 208
>TAIR|locus:2171519 [details] [associations]
symbol:AT5G47390 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
InterPro:IPR001005 InterPro:IPR001878 InterPro:IPR009057
Pfam:PF00249 PROSITE:PS50158 SMART:SM00343 SMART:SM00717
GO:GO:0009737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046686
GO:GO:0009753 GO:GO:0009723 GO:GO:0003677 GO:GO:0009651
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB018117
HOGENOM:HOG000237594 EMBL:AY072077 EMBL:AY096661 EMBL:AY084295
EMBL:AY519516 EMBL:AK226931 IPI:IPI00516324 RefSeq:NP_199550.1
UniGene:At.23392 ProteinModelPortal:Q9LVS0 SMR:Q9LVS0 STRING:Q9LVS0
PaxDb:Q9LVS0 PRIDE:Q9LVS0 EnsemblPlants:AT5G47390.1 GeneID:834786
KEGG:ath:AT5G47390 TAIR:At5g47390 eggNOG:NOG267183
InParanoid:Q9LVS0 OMA:SSRQSAF PhylomeDB:Q9LVS0
ProtClustDB:CLSN2686371 ArrayExpress:Q9LVS0 Genevestigator:Q9LVS0
Uniprot:Q9LVS0
Length = 365
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 57/79 (72%), Positives = 64/79 (81%)
Query: 121 GSSTRPSDQERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKY 180
GSS S +ERKKG PWTEEEHR FL+GL+K GKGDWR ISRN+VTTRTPTQVASHAQKY
Sbjct: 85 GSS---SSRERKKGTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKY 141
Query: 181 FNRQLTGGKDKRRSSIHDI 199
F RQ + KRRSS+ D+
Sbjct: 142 FIRQSNVSRRKRRSSLFDM 160
>TAIR|locus:2020653 [details] [associations]
symbol:AT1G70000 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0080167 "response to karrikin" evidence=IEP] InterPro:IPR001005
InterPro:IPR001878 InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50158
SMART:SM00343 SMART:SM00717 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0046686 GO:GO:0009733 GO:GO:0009753
GO:GO:0009723 GO:GO:0003677 GO:GO:0009651 GO:GO:0008270
GO:GO:0003700 GO:GO:0003682 GO:GO:0080167 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC002062
EMBL:BT006413 EMBL:AY519509 EMBL:AK227711 IPI:IPI00529630
PIR:F96722 RefSeq:NP_001185359.1 RefSeq:NP_177158.1
UniGene:At.35354 UniGene:At.67206 ProteinModelPortal:O04544
SMR:O04544 PRIDE:O04544 EnsemblPlants:AT1G70000.1
EnsemblPlants:AT1G70000.2 GeneID:843337 KEGG:ath:AT1G70000
TAIR:At1g70000 eggNOG:NOG270059 HOGENOM:HOG000237594
InParanoid:O04544 OMA:SMNNLSQ PhylomeDB:O04544
ProtClustDB:CLSN2913574 ArrayExpress:O04544 Genevestigator:O04544
Uniprot:O04544
Length = 261
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 52/73 (71%), Positives = 59/73 (80%)
Query: 128 DQERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNRQLTG 187
++ERK+G PWTEEEHR FL GL K GKGDWR ISRNFV TRTPTQVASHAQKYF R+
Sbjct: 91 NRERKRGTPWTEEEHRLFLTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRTNQ 150
Query: 188 GKDKRRSSIHDIT 200
+ +RRSS+ DIT
Sbjct: 151 NRRRRRSSLFDIT 163
>TAIR|locus:2011216 [details] [associations]
symbol:AT1G19000 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC068602
EMBL:AY045881 EMBL:AY079415 EMBL:AK316815 IPI:IPI00546856
PIR:G86323 RefSeq:NP_173334.1 RefSeq:NP_849689.1 UniGene:At.23413
ProteinModelPortal:Q9LMC7 SMR:Q9LMC7 IntAct:Q9LMC7 STRING:Q9LMC7
PRIDE:Q9LMC7 EnsemblPlants:AT1G19000.1 EnsemblPlants:AT1G19000.2
GeneID:838481 KEGG:ath:AT1G19000 TAIR:At1g19000 InParanoid:Q9LMC7
OMA:GYASAND PhylomeDB:Q9LMC7 ProtClustDB:CLSN2682289
ArrayExpress:Q9LMC7 Genevestigator:Q9LMC7 Uniprot:Q9LMC7
Length = 285
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 51/78 (65%), Positives = 63/78 (80%)
Query: 131 RKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNRQLTGGKD 190
RK+GVPWTE EH++FL+GL+K GKGDW+ ISRNFV +RTPTQVASHAQKYF R+ +
Sbjct: 98 RKRGVPWTENEHKRFLIGLQKVGKGDWKGISRNFVKSRTPTQVASHAQKYFLRRTNLNRR 157
Query: 191 KRRSSIHDITTVNLDETA 208
+RRSS+ DITT + E A
Sbjct: 158 RRRSSLFDITTETVTEMA 175
>TAIR|locus:2165106 [details] [associations]
symbol:AT5G56840 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001005 InterPro:IPR001878
InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50158 SMART:SM00343
SMART:SM00717 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB013392
HOGENOM:HOG000237594 EMBL:AY519517 EMBL:BT012528 EMBL:BT014956
IPI:IPI00548744 RefSeq:NP_200495.1 UniGene:At.29361
ProteinModelPortal:Q9FJS9 SMR:Q9FJS9 EnsemblPlants:AT5G56840.1
GeneID:835786 KEGG:ath:AT5G56840 TAIR:At5g56840 eggNOG:NOG244478
InParanoid:Q9FJS9 OMA:ESNIRPI PhylomeDB:Q9FJS9
ProtClustDB:CLSN2916792 Genevestigator:Q9FJS9 Uniprot:Q9FJS9
Length = 233
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 53/82 (64%), Positives = 65/82 (79%)
Query: 130 ERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNRQLTGGK 189
+RKKGVPWT EEHR FL+GL+K GKGDWR ISRNFV T++PTQVASHAQKYF RQ T
Sbjct: 86 DRKKGVPWTAEEHRTFLIGLEKLGKGDWRGISRNFVVTKSPTQVASHAQKYFLRQTTTLH 145
Query: 190 DKRR-SSIHDITTV-NLDETAT 209
KRR +S+ D+ + N++E +T
Sbjct: 146 HKRRRTSLFDMVSAGNVEENST 167
>TAIR|locus:2151621 [details] [associations]
symbol:AT5G61620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001005 InterPro:IPR001878
InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50158 SMART:SM00343
SMART:SM00717 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB012239 IPI:IPI00529008
RefSeq:NP_200970.1 UniGene:At.55665 ProteinModelPortal:Q9FKF9
SMR:Q9FKF9 PaxDb:Q9FKF9 PRIDE:Q9FKF9 EnsemblPlants:AT5G61620.1
GeneID:836284 KEGG:ath:AT5G61620 TAIR:At5g61620 eggNOG:NOG325297
HOGENOM:HOG000152521 InParanoid:Q9FKF9 OMA:HNGHNAR PhylomeDB:Q9FKF9
ProtClustDB:CLSN2713497 Genevestigator:Q9FKF9 Uniprot:Q9FKF9
Length = 317
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 52/87 (59%), Positives = 63/87 (72%)
Query: 114 YGPGGKRGSSTRPSDQERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQV 173
Y G+ S + E+KKG PWTEEEHR FL+GL K GKGDWR I+++FV+TRTPTQV
Sbjct: 87 YHSDGQIHSKKGKTAHEKKKGKPWTEEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQV 146
Query: 174 ASHAQKYFNRQLTGGKDKRRSSIHDIT 200
ASHAQKYF R K KRR+S+ DI+
Sbjct: 147 ASHAQKYFIRLNVNDKRKRRASLFDIS 173
>TAIR|locus:2027181 [details] [associations]
symbol:AT1G74840 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0046686
GO:GO:0009733 GO:GO:0009753 GO:GO:0009723 GO:GO:0003677
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC008263
EMBL:AC013258 HOGENOM:HOG000237594 ProtClustDB:CLSN2682289
EMBL:AY070098 EMBL:AY096393 EMBL:AY519510 IPI:IPI00526439
PIR:H96777 RefSeq:NP_177622.1 UniGene:At.11594
ProteinModelPortal:Q9S7N6 SMR:Q9S7N6 IntAct:Q9S7N6 STRING:Q9S7N6
EnsemblPlants:AT1G74840.1 GeneID:843823 KEGG:ath:AT1G74840
TAIR:At1g74840 InParanoid:Q9S7N6 OMA:GTRREIM PhylomeDB:Q9S7N6
ArrayExpress:Q9S7N6 Genevestigator:Q9S7N6 Uniprot:Q9S7N6
Length = 265
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 49/72 (68%), Positives = 60/72 (83%)
Query: 130 ERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNRQLTGGK 189
ERK+GVPWTEEEH+ FL+GL++ GKGDW+ ISRNFV TRT TQVASHAQKYF R+ +
Sbjct: 91 ERKRGVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQKYFLRRSNLNR 150
Query: 190 DKRRSSIHDITT 201
+RRSS+ D+TT
Sbjct: 151 RRRRSSLFDMTT 162
>TAIR|locus:2075760 [details] [associations]
symbol:AT3G10590 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002686 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 EMBL:AC011560 EMBL:AC013428 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AY550300 EMBL:DQ446652 IPI:IPI00540507
RefSeq:NP_187670.1 UniGene:At.50167 ProteinModelPortal:Q9SQY9
SMR:Q9SQY9 PRIDE:Q9SQY9 EnsemblPlants:AT3G10590.1 GeneID:820227
KEGG:ath:AT3G10590 TAIR:At3g10590 InParanoid:Q9SQY9
PhylomeDB:Q9SQY9 ArrayExpress:Q9SQY9 Genevestigator:Q9SQY9
Uniprot:Q9SQY9
Length = 206
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 63/176 (35%), Positives = 95/176 (53%)
Query: 28 KWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDVSDIEAGLIP 87
+WT +N++F++AL+ + D R + VA +P K + +V Y++L DV + L
Sbjct: 6 RWTEDDNRRFKSALSQFPPDNK-RLVNVAQHLP-KPLEEVKYYYEKLVNDVY-LPKPLEN 62
Query: 88 IPGYGNDSFTLEWVDSNQGYDGLKNFYGPGGKRGSSTRPSDQERKKGV---PWTEEEHRQ 144
+ + +E + Y+ + N + S +R+K PWTEEEHR
Sbjct: 63 VTQHLQKPMEME--EMKYMYEKMANDVNQMPEYVPLAESSQSKRRKKDTPNPWTEEEHRL 120
Query: 145 FLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNRQLTGGKDKRRSSIHDIT 200
FL GLKK+G+G S NFV T+TP QV+SHAQ Y+ RQ + K ++R SI DIT
Sbjct: 121 FLQGLKKYGEGASTLTSTNFVKTKTPRQVSSHAQ-YYKRQKSDNKKEKRRSIFDIT 175
>UNIPROTKB|Q58FS3 [details] [associations]
symbol:RAD "Transcription factor RADIALIS" species:4151
"Antirrhinum majus" [GO:0009908 "flower development" evidence=IMP]
[GO:0048262 "determination of dorsal/ventral asymmetry"
evidence=IMP] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0009908 GO:GO:0048262
EMBL:AY954971 PDB:2CJJ PDBsum:2CJJ ProteinModelPortal:Q58FS3
SMR:Q58FS3 EvolutionaryTrace:Q58FS3 Uniprot:Q58FS3
Length = 93
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 36/66 (54%), Positives = 45/66 (68%)
Query: 26 GTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDVSDIEAGL 85
G W+ +ENK FE ALAVYDKDTPDRW VA + G+T +V K Y+ L ED+ IE+G
Sbjct: 8 GRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIESGK 67
Query: 86 IPIPGY 91
+P P Y
Sbjct: 68 VPFPNY 73
>TAIR|locus:2025182 [details] [associations]
symbol:RL6 "RAD-like 6" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001005 InterPro:IPR009057
SMART:SM00717 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
SUPFAM:SSF46689 PROSITE:PS51293 EMBL:AC025814 HOGENOM:HOG000238103
EMBL:AY519525 EMBL:DQ395346 EMBL:BT026091 IPI:IPI00526625
IPI:IPI00775691 PIR:H96782 RefSeq:NP_001077825.1 RefSeq:NP_177661.1
UniGene:At.64902 ProteinModelPortal:Q1A173 SMR:Q1A173
EnsemblPlants:AT1G75250.2 GeneID:843862 KEGG:ath:AT1G75250
TAIR:At1g75250 eggNOG:NOG253755 InParanoid:Q9FRL6 OMA:PLPNYKT
ProtClustDB:CLSN2682492 ArrayExpress:Q1A173 Genevestigator:Q1A173
Uniprot:Q1A173
Length = 97
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 36/63 (57%), Positives = 44/63 (69%)
Query: 29 WTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDVSDIEAGLIPI 88
WT +NK FE ALAVYDKDTPDRW VA + GKTV +V + Y L ED+ +IE G +P+
Sbjct: 12 WTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRVPL 71
Query: 89 PGY 91
P Y
Sbjct: 72 PNY 74
>TAIR|locus:4010713631 [details] [associations]
symbol:RL4 "RAD-like 4" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:AC006439 EMBL:DQ487660 EMBL:DQ652756
EMBL:DQ395345 IPI:IPI00846254 RefSeq:NP_001077912.1
UniGene:At.49279 ProteinModelPortal:Q1G3C4 SMR:Q1G3C4 PRIDE:Q1G3C4
EnsemblPlants:AT2G18328.1 GeneID:5007884 KEGG:ath:AT2G18328
TAIR:At2g18328 eggNOG:NOG285168 OMA:EEDVGHI PhylomeDB:Q1G3C4
ProtClustDB:CLSN2920147 Genevestigator:Q1G3C4 Uniprot:Q1G3C4
Length = 77
Score = 185 (70.2 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 35/67 (52%), Positives = 47/67 (70%)
Query: 27 TKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDVSDIEAGLI 86
+ WT +E+KQFE ALA +DKDTPDRW K+A + GK+ +V + Y+ L DV+DIE+G
Sbjct: 9 SSWTAREDKQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRDVNDIESGRY 68
Query: 87 PIPGYGN 93
P P Y N
Sbjct: 69 PQPRYRN 75
>TAIR|locus:2016417 [details] [associations]
symbol:RL5 "RAD-like 5" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001005 InterPro:IPR009057
SMART:SM00717 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
SUPFAM:SSF46689 PROSITE:PS51293 InterPro:IPR017877 EMBL:AC025808
HOGENOM:HOG000238103 EMBL:AY519524 EMBL:DQ395347 EMBL:AK119034
EMBL:BT005657 IPI:IPI00517217 IPI:IPI00526097 RefSeq:NP_564087.2
UniGene:At.41742 ProteinModelPortal:Q8GW75 SMR:Q8GW75
EnsemblPlants:AT1G19510.1 GeneID:838537 KEGG:ath:AT1G19510
TAIR:At1g19510 eggNOG:NOG289750 InParanoid:Q8GW75 OMA:HFEQLVH
PhylomeDB:Q8GW75 Genevestigator:Q8GW75 Uniprot:Q8GW75
Length = 100
Score = 184 (69.8 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 24 SKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDVSDIEA 83
S + WT ++NK FE ALAVYDKDTPDRW VA + K+ +V + Y L ED+ +IE
Sbjct: 7 SSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIEQ 66
Query: 84 GLIPIPGY 91
L+P+P Y
Sbjct: 67 DLVPLPKY 74
>TAIR|locus:2136283 [details] [associations]
symbol:RL1 "RAD-like 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002687 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 EMBL:AL161594 EMBL:AL050351
EMBL:AY519527 EMBL:BT024650 EMBL:DQ375231 IPI:IPI00518965
PIR:T08573 RefSeq:NP_195636.2 UniGene:At.64218
ProteinModelPortal:F4JVB8 SMR:F4JVB8 EnsemblPlants:AT4G39250.1
GeneID:830081 KEGG:ath:AT4G39250 TAIR:At4g39250 eggNOG:NOG329125
HOGENOM:HOG000238103 InParanoid:Q0NZY1 OMA:RHYEILV Uniprot:F4JVB8
Length = 100
Score = 184 (69.8 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 34/75 (45%), Positives = 51/75 (68%)
Query: 17 SNWLFQESKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEE 76
S+ + +S G+ WT ++NK FE ALA YD+DTP+RW VA ++ GKT +V + Y+ L +
Sbjct: 3 SSSMSSQSSGS-WTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQ 61
Query: 77 DVSDIEAGLIPIPGY 91
D++ IE G +P P Y
Sbjct: 62 DINSIENGHVPFPNY 76
>TAIR|locus:2115260 [details] [associations]
symbol:RL3 "RAD-like 3" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:AL161589 eggNOG:KOG0724 EMBL:Z99708
EMBL:BT010770 EMBL:BT011255 IPI:IPI00524086 IPI:IPI00944270
PIR:G85431 RefSeq:NP_195375.4 UniGene:At.47987
ProteinModelPortal:Q6NNN0 SMR:Q6NNN0 IntAct:Q6NNN0 PRIDE:Q6NNN0
GeneID:829809 KEGG:ath:AT4G36570 TAIR:At4g36570 PhylomeDB:Q6NNN0
Genevestigator:Q6NNN0 Uniprot:Q6NNN0
Length = 81
Score = 183 (69.5 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 35/68 (51%), Positives = 44/68 (64%)
Query: 24 SKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDVSDIEA 83
S WT +ENK FE ALA YD+DTPDRW VA + GK+ +V + Y+ L DV+DIE+
Sbjct: 7 SSSASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRDVNDIES 66
Query: 84 GLIPIPGY 91
G P P Y
Sbjct: 67 GRYPHPNY 74
>TAIR|locus:2049374 [details] [associations]
symbol:MEE3 "MATERNAL EFFECT EMBRYO ARREST 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0009793 "embryo development ending
in seed dormancy" evidence=IMP] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0010114 "response to red light" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0010114 GO:GO:0009630
GO:GO:0009793 SUPFAM:SSF46689 PROSITE:PS51293 InterPro:IPR017877
EMBL:AC007119 HOGENOM:HOG000238103 EMBL:AY519526 EMBL:BT008554
EMBL:BT008698 EMBL:AK229516 IPI:IPI00543218 PIR:G84603
RefSeq:NP_179759.1 UniGene:At.43298 ProteinModelPortal:Q9SIJ5
SMR:Q9SIJ5 IntAct:Q9SIJ5 PRIDE:Q9SIJ5 EnsemblPlants:AT2G21650.1
GeneID:816703 KEGG:ath:AT2G21650 TAIR:At2g21650 eggNOG:NOG308303
InParanoid:Q9SIJ5 OMA:KHIESGH PhylomeDB:Q9SIJ5
ProtClustDB:CLSN2683609 Genevestigator:Q9SIJ5 Uniprot:Q9SIJ5
Length = 101
Score = 177 (67.4 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 33/63 (52%), Positives = 41/63 (65%)
Query: 29 WTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDVSDIEAGLIPI 88
WT ++NK FE ALAVYD+DTPDRW VA + GKT + +QY L D+ IE G +P
Sbjct: 14 WTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIESIENGHVPF 73
Query: 89 PGY 91
P Y
Sbjct: 74 PDY 76
>DICTYBASE|DDB_G0274463 [details] [associations]
symbol:mybJ "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
dictyBase:DDB_G0274463 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GenomeReviews:CM000151_GR GO:GO:0006351 GO:GO:0003682
EMBL:AAFI02000012 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 RefSeq:XP_644160.1 ProteinModelPortal:Q869R9
EnsemblProtists:DDB0220506 GeneID:8619589 KEGG:ddi:DDB_G0274463
eggNOG:NOG264937 OMA:KGAWKEI Uniprot:Q869R9
Length = 734
Score = 192 (72.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 40/84 (47%), Positives = 56/84 (66%)
Query: 121 GSSTRPSDQERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKY 180
G T P+ ++ WT+EEH +FL G++ GKG W+ I++ FV TRTPTQ+ SHAQKY
Sbjct: 363 GGKTNPTGKKTSLKQGWTKEEHIRFLNGIQIHGKGAWKEIAQ-FVGTRTPTQIQSHAQKY 421
Query: 181 FNRQLTGGKDKRRSSIHDITTVNL 204
+ RQ K+KR SIHD++ +L
Sbjct: 422 YLRQKQETKNKR--SIHDLSLQDL 443
>TAIR|locus:504955890 [details] [associations]
symbol:AT3G10595 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003682
EMBL:AC013428 SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
HOGENOM:HOG000237920 EMBL:BT015072 EMBL:BT015666 IPI:IPI00517930
RefSeq:NP_683547.2 UniGene:At.49612 ProteinModelPortal:Q9LPN9
SMR:Q9LPN9 EnsemblPlants:AT3G10595.1 GeneID:820228
KEGG:ath:AT3G10595 TAIR:At3g10595 eggNOG:NOG296411
InParanoid:Q9LPN9 OMA:KETHEWF PhylomeDB:Q9LPN9
ProtClustDB:CLSN2915149 Genevestigator:Q9LPN9 Uniprot:Q9LPN9
Length = 183
Score = 107 (42.7 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 23/69 (33%), Positives = 40/69 (57%)
Query: 137 WTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNRQLTGGKDKRRSSI 196
WT+E H FL+GL +FGK DWR I+ + ++P QV +A+ ++ Q +++ I
Sbjct: 84 WTKETHEWFLIGLDRFGK-DWRKIAV-LLDCKSPIQVEIYAENFYQWQ-----SSKKNVI 136
Query: 197 HDITTVNLD 205
+D+ + D
Sbjct: 137 NDLNVASTD 145
Score = 88 (36.0 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 29 WTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDVSDIEAGLIPI 88
WT +EN+ F++AL ++ R+ VA + ++V DV + YKEL D+ ++ + +
Sbjct: 6 WTTEENEMFKDALVMFTAFLLTRFESVAEYVD-RSVDDVKEHYKELVNDLLEMGSSRVAF 64
Query: 89 P 89
P
Sbjct: 65 P 65
>TAIR|locus:2171494 [details] [associations]
symbol:AT5G47290 "AT5G47290" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB018117
IPI:IPI00548425 RefSeq:NP_199540.1 UniGene:At.65655
ProteinModelPortal:Q9LVT0 SMR:Q9LVT0 EnsemblPlants:AT5G47290.1
GeneID:834776 KEGG:ath:AT5G47290 TAIR:At5g47290 PhylomeDB:Q9LVT0
ProtClustDB:CLSN2686360 Genevestigator:Q9LVT0 Uniprot:Q9LVT0
Length = 96
Score = 99 (39.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 31/74 (41%), Positives = 43/74 (58%)
Query: 26 GT-KWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIK-QYKELEEDVSDIEA 83
GT KWT +ENK FE AL V D+P + +AA + +T D IK Y +L +D++ IE+
Sbjct: 3 GTMKWTWEENKAFEVAL-VQVPDSPAKLEIIAAQM--RTSVDEIKYHYDKLLQDIAVIES 59
Query: 84 GLIPIPGYGNDSFT 97
G +P Y S T
Sbjct: 60 GRDVVPEYSPRSAT 73
Score = 43 (20.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 132 KKGVPWTEEEHRQF 145
KKG W+ +EH +
Sbjct: 78 KKGTRWSAQEHESY 91
>DICTYBASE|DDB_G0289151 [details] [associations]
symbol:mybI "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
dictyBase:DDB_G0289151 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GenomeReviews:CM000154_GR
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
PROSITE:PS51294 EMBL:AAFI02000130 RefSeq:XP_636387.1
ProteinModelPortal:Q54HX6 EnsemblProtists:DDB0233332 GeneID:8626988
KEGG:ddi:DDB_G0289151 eggNOG:NOG265212 OMA:CKLIKEN Uniprot:Q54HX6
Length = 977
Score = 143 (55.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 31/71 (43%), Positives = 48/71 (67%)
Query: 129 QERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNR--QLT 186
+++K+ WT EEH +F+ L K+G D ++IS+ +V+TR PTQV +HAQKYF R +
Sbjct: 167 EKKKQSRYWTPEEHSRFIEALSKYGHKDVKSISQ-YVSTRNPTQVRTHAQKYFLRIDRER 225
Query: 187 GGKDKRRSSIH 197
G K + + SI+
Sbjct: 226 GRKLESKESIN 236
Score = 43 (20.2 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 13/46 (28%), Positives = 17/46 (36%)
Query: 227 IQLQQQPKTVDMSNEQFNWKSQNEGTAMLFNSMNGTAFMAPFCGIS 272
+ LQQ P + FN S N NS N + GI+
Sbjct: 874 VPLQQSPHAPPQQSPHFNNNSNNNNNNSNNNSNNSNNNSSGSSGIN 919
Score = 37 (18.1 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 226 VIQLQQQPKTVDMSNEQFNWKSQ 248
+IQ QQQ + M +Q ++Q
Sbjct: 633 IIQQQQQVQQQQMQQQQMMMQNQ 655
Score = 37 (18.1 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 228 QLQQQPKTVDMSNEQFNWKSQNEGTAMLFNSMNGTAFMAP 267
Q QQQ + Q N S + ++ +S+NG +P
Sbjct: 721 QQQQQQQQQQQQIYQQNLNSNSGNSSPNISSINGDFVRSP 760
>UNIPROTKB|I3LNQ0 [details] [associations]
symbol:I3LNQ0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 Gene3D:1.10.287.110
SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
GeneTree:ENSGT00530000063419 Ensembl:ENSSSCT00000023342
Uniprot:I3LNQ0
Length = 503
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 27 TKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDV 78
T WT +E K E AL Y +TP+RW K+A +PG+T D +K+YKEL E V
Sbjct: 434 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMV 485
>UNIPROTKB|I3LSN5 [details] [associations]
symbol:I3LSN5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 Gene3D:1.10.287.110
SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
GeneTree:ENSGT00530000063419 Ensembl:ENSSSCT00000028055 OMA:HEDSTRD
Uniprot:I3LSN5
Length = 508
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 27 TKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDV 78
T WT +E K E AL Y +TP+RW K+A +PG+T D +K+YKEL E V
Sbjct: 439 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMV 490
>UNIPROTKB|Q1RMH9 [details] [associations]
symbol:DNAJC2 "DnaJ homolog subfamily C member 2"
species:9913 "Bos taurus" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0043130 "ubiquitin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0030544 "Hsp70 protein
binding" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0000085 "G2 phase of mitotic cell cycle" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253
Pfam:PF00226 GO:GO:0005829 GO:GO:0005634 GO:GO:0045893
GO:GO:0003677 GO:GO:0006260 GO:GO:0031965 GO:GO:0000085
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 GO:GO:0043130 InterPro:IPR017877
GeneTree:ENSGT00530000063419 EMBL:BC114887 IPI:IPI00703453
RefSeq:NP_001068805.1 UniGene:Bt.61294 ProteinModelPortal:Q1RMH9
STRING:Q1RMH9 PRIDE:Q1RMH9 Ensembl:ENSBTAT00000004925 GeneID:507897
KEGG:bta:507897 CTD:27000 eggNOG:COG5269 HOGENOM:HOG000006900
HOVERGEN:HBG008782 InParanoid:Q1RMH9 KO:K09522 OMA:RWFEAFI
OrthoDB:EOG4D26PN NextBio:20868264 Uniprot:Q1RMH9
Length = 621
Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 27 TKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDV 78
T WT +E K E AL Y +TP+RW K+A +PG+T D +K+YKEL E V
Sbjct: 552 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMV 603
>UNIPROTKB|Q99543 [details] [associations]
symbol:DNAJC2 "DnaJ homolog subfamily C member 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0000085 "G2
phase of mitotic cell cycle" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0030308 "negative regulation of cell
growth" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0030544 "Hsp70 protein binding" evidence=IPI] [GO:0051083 "'de
novo' cotranslational protein folding" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
GO:GO:0005829 GO:GO:0045893 GO:GO:0030308 GO:GO:0003677
GO:GO:0006260 GO:GO:0031965 GO:GO:0000085 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 GO:GO:0043130 CTD:27000 eggNOG:COG5269
HOGENOM:HOG000006900 HOVERGEN:HBG008782 KO:K09522 OMA:RWFEAFI
EMBL:X98260 EMBL:AC004668 EMBL:BC000859 EMBL:BC139751
IPI:IPI00455199 IPI:IPI00830108 RefSeq:NP_001123359.1
RefSeq:NP_055192.1 UniGene:Hs.558476 ProteinModelPortal:Q99543
SMR:Q99543 STRING:Q99543 PhosphoSite:Q99543 DMDM:296439472
PaxDb:Q99543 PRIDE:Q99543 DNASU:27000 Ensembl:ENST00000249270
Ensembl:ENST00000379263 GeneID:27000 KEGG:hsa:27000 UCSC:uc003vbo.3
UCSC:uc010lix.3 GeneCards:GC07M102952 HGNC:HGNC:13192 HPA:HPA020454
MIM:605502 neXtProt:NX_Q99543 PharmGKB:PA162383835
InParanoid:Q99543 GenomeRNAi:27000 NextBio:49486
ArrayExpress:Q99543 Bgee:Q99543 CleanEx:HS_DNAJC2
Genevestigator:Q99543 GermOnline:ENSG00000105821 GO:GO:0051083
Uniprot:Q99543
Length = 621
Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 27 TKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDV 78
T WT +E K E AL Y +TP+RW K+A +PG+T D +K+YKEL E V
Sbjct: 552 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMV 603
>UNIPROTKB|F1SB54 [details] [associations]
symbol:DNAJC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0030544 "Hsp70
protein binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253
Pfam:PF00226 GO:GO:0005829 GO:GO:0045893 GO:GO:0003677
GO:GO:0031965 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 Gene3D:1.10.287.110
SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
InterPro:IPR017877 PROSITE:PS50090 GeneTree:ENSGT00530000063419
KO:K09522 EMBL:CU570825 RefSeq:XP_003130290.1
Ensembl:ENSSSCT00000016801 GeneID:100514533 KEGG:ssc:100514533
OMA:FQSWRDF Uniprot:F1SB54
Length = 621
Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 27 TKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDV 78
T WT +E K E AL Y +TP+RW K+A +PG+T D +K+YKEL E V
Sbjct: 552 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMV 603
>UNIPROTKB|Q4R8H2 [details] [associations]
symbol:DNAJC2 "DnaJ homolog subfamily C member 2"
species:9541 "Macaca fascicularis" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005829
"cytosol" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0043130 "ubiquitin binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226 GO:GO:0005829
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 GO:GO:0043130 HOVERGEN:HBG008782 OrthoDB:EOG4D26PN
EMBL:AB168480 HSSP:Q96KC8 ProteinModelPortal:Q4R8H2 PRIDE:Q4R8H2
Uniprot:Q4R8H2
Length = 621
Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 27 TKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDV 78
T WT +E K E AL Y +TP+RW K+A +PG+T D +K+YKEL E V
Sbjct: 552 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMV 603
>UNIPROTKB|E2RS54 [details] [associations]
symbol:DNAJC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 GeneTree:ENSGT00530000063419 OMA:RWFEAFI
EMBL:AAEX03011249 Ensembl:ENSCAFT00000006800 Uniprot:E2RS54
Length = 627
Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 27 TKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDV 78
T WT +E K E AL Y +TP+RW K+A +PG+T D +K+YKEL E V
Sbjct: 558 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMV 609
>UNIPROTKB|F1P3V8 [details] [associations]
symbol:DNAJC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0000085
"G2 phase of mitotic cell cycle" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0030544 "Hsp70 protein binding" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
GO:GO:0005829 GO:GO:0045893 GO:GO:0003677 GO:GO:0006260
GO:GO:0031965 GO:GO:0000085 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 InterPro:IPR017877 PROSITE:PS50090
GeneTree:ENSGT00530000063419 OMA:RWFEAFI EMBL:AADN02036895
IPI:IPI00571328 Ensembl:ENSGALT00000013428 Uniprot:F1P3V8
Length = 621
Score = 136 (52.9 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 25/50 (50%), Positives = 34/50 (68%)
Query: 29 WTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDV 78
WT +E K E AL Y +TP+RW K+AA +PG++ D +K+YKEL E V
Sbjct: 554 WTTEEQKLLEQALKTYPVNTPERWEKIAAAVPGRSKKDCMKRYKELVEMV 603
>MGI|MGI:99470 [details] [associations]
symbol:Dnajc2 "DnaJ (Hsp40) homolog, subfamily C, member 2"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005829
"cytosol" evidence=ISO] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030544 "Hsp70 protein binding" evidence=ISO] [GO:0042393
"histone binding" evidence=ISO] [GO:0043130 "ubiquitin binding"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:2000279 "negative regulation of
DNA biosynthetic process" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 InterPro:IPR001623
InterPro:IPR018253 Pfam:PF00226 MGI:MGI:99470 GO:GO:0005829
GO:GO:0005634 GO:GO:0045893 GO:GO:0030308 GO:GO:0003677
GO:GO:0006260 GO:GO:0031965 GO:GO:0000085 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 InterPro:IPR017930 GO:GO:0043130
GeneTree:ENSGT00530000063419 CTD:27000 eggNOG:COG5269
HOGENOM:HOG000006900 HOVERGEN:HBG008782 KO:K09522 OMA:RWFEAFI
OrthoDB:EOG4D26PN EMBL:D63784 EMBL:AK131964 EMBL:BC052027
EMBL:U53208 IPI:IPI00126317 PIR:A57591 RefSeq:NP_033610.1
UniGene:Mm.266312 ProteinModelPortal:P54103 SMR:P54103
STRING:P54103 PhosphoSite:P54103 PaxDb:P54103 PRIDE:P54103
Ensembl:ENSMUST00000030771 GeneID:22791 KEGG:mmu:22791
UCSC:uc008woy.1 InParanoid:P54103 NextBio:303379 Bgee:P54103
CleanEx:MM_DNAJC2 Genevestigator:P54103
GermOnline:ENSMUSG00000029014 Uniprot:P54103
Length = 621
Score = 136 (52.9 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 27 TKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDV 78
T WT +E K E AL Y +TP+RW K+A +PG+T D +++YKEL E V
Sbjct: 552 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMRRYKELVEMV 603
>TAIR|locus:2167210 [details] [associations]
symbol:RVE1 "REVEILLE 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IMP] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0007623 "circadian rhythm" evidence=IEP;RCA] [GO:0009734 "auxin
mediated signaling pathway" evidence=IMP] [GO:0009851 "auxin
biosynthetic process" evidence=IMP] [GO:0010600 "regulation of
auxin biosynthetic process" evidence=IMP] [GO:0009651 "response to
salt stress" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009739 "response to gibberellin stimulus"
evidence=RCA] [GO:0009751 "response to salicylic acid stimulus"
evidence=RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 EMBL:CP002688 GO:GO:0009734 GO:GO:0003677
GO:GO:0007623 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009851 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0010600 IPI:IPI00524365
RefSeq:NP_568344.2 UniGene:At.21718 ProteinModelPortal:F4KGY6
SMR:F4KGY6 EnsemblPlants:AT5G17300.1 GeneID:831595
KEGG:ath:AT5G17300 OMA:TKERERW Uniprot:F4KGY6
Length = 387
Score = 132 (51.5 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 33/89 (37%), Positives = 53/89 (59%)
Query: 103 SNQGYDGLKNFYGPGGKRGSSTRPSDQERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISR 162
++Q + G N Y P ++ T ++ER WT+EEH++F+ LK +G+ WR I
Sbjct: 32 NDQSFGG--NDYAPKVRK-PYTITKERER-----WTDEEHKKFVEALKLYGRA-WRRIEE 82
Query: 163 NFVTTRTPTQVASHAQKYFN---RQLTGG 188
+ V ++T Q+ SHAQK+F+ R+ TGG
Sbjct: 83 H-VGSKTAVQIRSHAQKFFSKVAREATGG 110
>TAIR|locus:504955668 [details] [associations]
symbol:AT3G10113 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002686 GO:GO:0006355 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
UniGene:At.27131 IPI:IPI00534114 RefSeq:NP_683543.1
UniGene:At.53244 ProteinModelPortal:F4J2J6 SMR:F4J2J6
EnsemblPlants:AT3G10113.1 GeneID:820173 KEGG:ath:AT3G10113
PhylomeDB:F4J2J6 Uniprot:F4J2J6
Length = 336
Score = 129 (50.5 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 132 KKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNRQLTGGKDK 191
K+ W+EEEH +FL +K +G+G WR I + + T+T Q+ SHAQK+F++ +
Sbjct: 63 KQREKWSEEEHDRFLEAIKLYGRG-WRQIQEH-IGTKTAVQIRSHAQKFFSKMAQEADSR 120
Query: 192 RRSSIHDI 199
S+ I
Sbjct: 121 SEGSVKAI 128
>TAIR|locus:2014114 [details] [associations]
symbol:EPR1 "EARLY-PHYTOCHROME-RESPONSIVE1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0009723 "response to ethylene stimulus" evidence=IEP]
[GO:0046686 "response to cadmium ion" evidence=IEP] [GO:0007623
"circadian rhythm" evidence=IEP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 EMBL:CP002684
GO:GO:0046686 GO:GO:0009723 GO:GO:0003677 GO:GO:0007623
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AC013354 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00891668
RefSeq:NP_001117304.1 UniGene:At.27131 ProteinModelPortal:B3H5A8
SMR:B3H5A8 EnsemblPlants:AT1G18330.2 GeneID:838413
KEGG:ath:AT1G18330 TAIR:At1g18330 eggNOG:NOG263004
HOGENOM:HOG000064617 OMA:NSCTSDI PhylomeDB:B3H5A8
ProtClustDB:CLSN2682175 Genevestigator:B3H5A8 Uniprot:B3H5A8
Length = 372
Score = 129 (50.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 132 KKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNRQLTGGKDK 191
K+ W+EEEH +FL +K +G+G WR I + + T+T Q+ SHAQK+F++ +
Sbjct: 74 KQREKWSEEEHDRFLEAIKLYGRG-WRQIQEH-IGTKTAVQIRSHAQKFFSKMAQEADSR 131
Query: 192 RRSSIHDI 199
S+ I
Sbjct: 132 SEGSVKAI 139
>RGD|620524 [details] [associations]
symbol:Dnajc2 "DnaJ (Hsp40) homolog, subfamily C, member 2"
species:10116 "Rattus norvegicus" [GO:0000085 "G2 phase of mitotic
cell cycle" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO;ISS] [GO:0006260
"DNA replication" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0030544 "Hsp70 protein binding" evidence=IEA;ISO]
[GO:0031965 "nuclear membrane" evidence=IEA;ISO] [GO:0042393
"histone binding" evidence=ISO;ISS] [GO:0043130 "ubiquitin binding"
evidence=ISO;ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 InterPro:IPR001623
InterPro:IPR018253 Pfam:PF00226 RGD:620524 GO:GO:0005829
GO:GO:0005634 GO:GO:0045893 GO:GO:0030308 GO:GO:0003677
GO:GO:0006260 GO:GO:0031965 GO:GO:0000085 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 InterPro:IPR017930 GO:GO:0043130
GeneTree:ENSGT00530000063419 CTD:27000 eggNOG:COG5269
HOGENOM:HOG000006900 HOVERGEN:HBG008782 KO:K09522 OrthoDB:EOG4D26PN
HSSP:Q96KC8 EMBL:AY322161 EMBL:AY322163 EMBL:BC088838 EMBL:AF118853
IPI:IPI00358140 IPI:IPI00991289 RefSeq:NP_446228.2 UniGene:Rn.11908
ProteinModelPortal:Q7TQ20 STRING:Q7TQ20 PhosphoSite:Q7TQ20
PRIDE:Q7TQ20 Ensembl:ENSRNOT00000016909 GeneID:116456
KEGG:rno:116456 InParanoid:Q7TQ18 NextBio:618962
Genevestigator:Q7TQ20 Uniprot:Q7TQ20
Length = 621
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 29 WTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDV 78
WT +E K E AL Y +TP+RW K+A +PG+T D +++YKEL E V
Sbjct: 554 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMRRYKELVEMV 603
>UNIPROTKB|Q6P2Y3 [details] [associations]
symbol:dnajc2 "DnaJ homolog subfamily C member 2"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0043130 "ubiquitin binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 GO:GO:0043130 GeneTree:ENSGT00530000063419
CTD:27000 eggNOG:COG5269 HOGENOM:HOG000006900 HOVERGEN:HBG008782
KO:K09522 OrthoDB:EOG4D26PN EMBL:BC064251 RefSeq:NP_001186412.1
UniGene:Str.15500 ProteinModelPortal:Q6P2Y3 STRING:Q6P2Y3
Ensembl:ENSXETT00000049978 GeneID:394933 KEGG:xtr:394933
Xenbase:XB-GENE-964533 InParanoid:Q6P2Y3 Bgee:Q6P2Y3 Uniprot:Q6P2Y3
Length = 620
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 29 WTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDV 78
WT +E K E AL Y +TP+RW K+A +PG++ D +K+YKEL E V
Sbjct: 553 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRSKKDCMKRYKELVEMV 602
>DICTYBASE|DDB_G0277927 [details] [associations]
symbol:mybH "SWIRM domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000555
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF01398 Pfam:PF04433 PROSITE:PS50934
SMART:SM00232 SMART:SM00717 dictyBase:DDB_G0277927 GO:GO:0005634
GO:GO:0006355 GenomeReviews:CM000152_GR GO:GO:0003677
EMBL:AAFI02000023 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 eggNOG:NOG329351 HSSP:Q5VVJ2 RefSeq:XP_642011.1
ProteinModelPortal:Q54Z40 MEROPS:M67.A12 EnsemblProtists:DDB0220617
GeneID:8621224 KEGG:ddi:DDB_G0277927 KO:K11865 OMA:PIQQSPI
Uniprot:Q54Z40
Length = 1217
Score = 121 (47.7 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 136 PWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNR--QLTGGKDKR 192
PW+ EEH FL ++K+G+G+W+ IS + +R Q+ +HA+ YF++ Q G K+
Sbjct: 231 PWSNEEHELFLKAIEKYGRGNWKLIS-TLIKSRNTLQIKNHARIYFDKISQQNGPPSKK 288
Score = 55 (24.4 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 27 TKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTV 64
+ WT +E + F A +YDKD K+ + KT+
Sbjct: 151 SSWTKEEERLFVEAYKLYDKDNK----KIQEHVKTKTI 184
Score = 37 (18.1 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 233 PKTVDMSNEQFNWKSQNEGTAMLFNSMNGTA 263
PKT + N+KS N F S+N ++
Sbjct: 450 PKTPTYTTS--NYKSSNNPLNRSFGSINNSS 478
>TAIR|locus:2075049 [details] [associations]
symbol:RVE8 "REVEILLE 8" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0032922 "circadian
regulation of gene expression" evidence=IMP] [GO:0043966 "histone
H3 acetylation" evidence=IMP] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0003700 GO:GO:0003682
GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
GO:GO:0032922 GO:GO:0048573 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237512
GO:GO:0043966 ProtClustDB:CLSN2689417 EMBL:AY091106 EMBL:AY122969
IPI:IPI00517009 RefSeq:NP_187571.2 UniGene:At.40072
ProteinModelPortal:Q8RWU3 SMR:Q8RWU3 STRING:Q8RWU3 PRIDE:Q8RWU3
EnsemblPlants:AT3G09600.1 GeneID:820117 KEGG:ath:AT3G09600
TAIR:At3g09600 InParanoid:Q8RWU3 OMA:RVISPQH PhylomeDB:Q8RWU3
Genevestigator:Q8RWU3 Uniprot:Q8RWU3
Length = 298
Score = 121 (47.7 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 137 WTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYF 181
WTEEEH +FL L+ F + DW+ I +FV ++T Q+ SHAQKYF
Sbjct: 46 WTEEEHDKFLEALQLFDR-DWKKIE-DFVGSKTVIQIRSHAQKYF 88
>TAIR|locus:2025411 [details] [associations]
symbol:ASG4 "ALTERED SEED GERMINATION 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0009651 "response to salt stress" evidence=IEP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:Y12776
EMBL:AC061957 GO:GO:0003677 GO:GO:0009651 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AY519508 EMBL:AJ937211 EMBL:BT029347
IPI:IPI00536561 RefSeq:NP_171659.1 UniGene:At.49839
ProteinModelPortal:Q6R0H0 SMR:Q6R0H0 IntAct:Q6R0H0
EnsemblPlants:AT1G01520.1 GeneID:839337 KEGG:ath:AT1G01520
TAIR:At1g01520 eggNOG:KOG0724 HOGENOM:HOG000237512
InParanoid:Q6R0H0 OMA:SHIMEQG PhylomeDB:Q6R0H0
ProtClustDB:CLSN2682863 Genevestigator:Q6R0H0 Uniprot:Q6R0H0
Length = 287
Score = 119 (46.9 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 137 WTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNR-QLTGGKD 190
WTE+EH +FL L F + DW+ I + FV ++T Q+ SHAQKYF + Q G K+
Sbjct: 64 WTEQEHDKFLEALHLFDR-DWKKI-KAFVGSKTVIQIRSHAQKYFLKVQKNGTKE 116
>TAIR|locus:2169135 [details] [associations]
symbol:RVE2 "REVEILLE 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0007623
"circadian rhythm" evidence=IEP;RCA] [GO:0009845 "seed germination"
evidence=IMP] [GO:0009909 "regulation of flower development"
evidence=IMP] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 EMBL:CP002688 GO:GO:0009733
GO:GO:0009753 GO:GO:0009723 GO:GO:0003677 GO:GO:0007623
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0009845
GO:GO:0009909 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00528444
RefSeq:NP_198542.1 UniGene:At.30502 UniGene:At.68589
ProteinModelPortal:F4K5X6 SMR:F4K5X6 PRIDE:F4K5X6
EnsemblPlants:AT5G37260.1 GeneID:833700 KEGG:ath:AT5G37260
OMA:SSHTEES ArrayExpress:F4K5X6 Uniprot:F4K5X6
Length = 287
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 132 KKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNR 183
K+ WTE EH +F+ LK +G+ WR I + V T+T Q+ SHAQK+F +
Sbjct: 34 KQREKWTEAEHEKFVEALKLYGRA-WRRIEEH-VGTKTAVQIRSHAQKFFTK 83
>DICTYBASE|DDB_G0288783 [details] [associations]
symbol:mybG "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 dictyBase:DDB_G0288783 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GenomeReviews:CM000154_GR
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
EMBL:AAFI02000125 RefSeq:XP_636518.1 HSSP:Q5VVJ2
ProteinModelPortal:Q54IF9 PRIDE:Q54IF9 EnsemblProtists:DDB0220514
GeneID:8626803 KEGG:ddi:DDB_G0288783 eggNOG:NOG279643 OMA:NNTGERI
Uniprot:Q54IF9
Length = 423
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 137 WTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYF 181
WT+EEH++FL L F + DW+ I +FV ++T Q+ SHAQKYF
Sbjct: 44 WTDEEHQKFLEALTLFDR-DWKKIE-SFVGSKTVIQIRSHAQKYF 86
>TAIR|locus:2044345 [details] [associations]
symbol:CCA1 "circadian clock associated 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0010243 "response to
organic nitrogen" evidence=IEP] [GO:0048574 "long-day
photoperiodism, flowering" evidence=IGI;RCA] [GO:0007623 "circadian
rhythm" evidence=IEP;IGI;RCA;IMP;TAS] [GO:0019904 "protein domain
specific binding" evidence=ISS] [GO:0043496 "regulation of protein
homodimerization activity" evidence=IMP] [GO:0009409 "response to
cold" evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042754 "negative regulation of circadian rhythm"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009639 "response to red or far
red light" evidence=RCA] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=RCA] [GO:0042752 "regulation of
circadian rhythm" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0009737
GO:GO:0005634 GO:GO:0046686 GO:GO:0045892 GO:GO:0045893
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733 GO:GO:0009753
GO:GO:0009723 GO:GO:0007623 GO:GO:0009651 GO:GO:0009409
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
GO:GO:0010243 GO:GO:0043496 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC005310 GO:GO:0048574
EMBL:U28422 EMBL:U79156 EMBL:AY519511 EMBL:BT001096 EMBL:BT001105
IPI:IPI00522826 IPI:IPI00545715 PIR:T02684 RefSeq:NP_850460.1
RefSeq:NP_850461.1 UniGene:At.10956 ProteinModelPortal:P92973
SMR:P92973 IntAct:P92973 STRING:P92973 PRIDE:P92973
EnsemblPlants:AT2G46830.1 GeneID:819296 KEGG:ath:AT2G46830
GeneFarm:1652 TAIR:At2g46830 eggNOG:NOG310744 HOGENOM:HOG000084594
InParanoid:P92973 KO:K12134 OMA:HPEMANE PhylomeDB:P92973
ProtClustDB:CLSN2918288 GO:GO:0042754 Uniprot:P92973
Length = 608
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 137 WTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNR 183
WTEEEH +F+ L+ +G+ W+ I + V T+T Q+ SHAQK+F++
Sbjct: 27 WTEEEHNRFIEALRLYGRA-WQKIEEH-VATKTAVQIRSHAQKFFSK 71
>ZFIN|ZDB-GENE-040426-1912 [details] [associations]
symbol:dnajc2 "DnaJ (Hsp40) homolog, subfamily C,
member 2" species:7955 "Danio rerio" [GO:0003682 "chromatin
binding" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0043130 "ubiquitin binding" evidence=ISS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 InterPro:IPR001623
Pfam:PF00226 ZFIN:ZDB-GENE-040426-1912 GO:GO:0005829 GO:GO:0005634
GO:GO:0045893 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0042393 Gene3D:1.10.287.110 SMART:SM00271
SUPFAM:SSF46565 PROSITE:PS50076 GO:GO:0043130
GeneTree:ENSGT00530000063419 CTD:27000 HOGENOM:HOG000006900
HOVERGEN:HBG008782 KO:K09522 EMBL:BC055125 EMBL:BC067568
IPI:IPI00505401 RefSeq:NP_997976.1 UniGene:Dr.80721
ProteinModelPortal:Q6NWJ4 Ensembl:ENSDART00000103463 GeneID:403080
KEGG:dre:403080 eggNOG:NOG297510 InParanoid:Q6NWJ4 NextBio:20816872
Bgee:Q6NWJ4 Uniprot:Q6NWJ4
Length = 618
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 23 ESKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEE 76
+S WT +E K E AL Y T +RW +++ +PG++ D +K+YKEL E
Sbjct: 547 DSNAAAWTTEEQKLLEQALKTYPVSTAERWERISEAVPGRSKKDCMKRYKELVE 600
>TAIR|locus:2124928 [details] [associations]
symbol:AT4G01280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0000303 "response
to superoxide" evidence=RCA] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=RCA] [GO:0009873 "ethylene mediated
signaling pathway" evidence=RCA] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0009737 GO:GO:0046686
EMBL:CP002687 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0003700 GO:GO:0003682
GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 HOGENOM:HOG000237512 ProtClustDB:CLSN2682863
EMBL:AB493668 IPI:IPI00656826 RefSeq:NP_001031568.1
UniGene:At.44234 ProteinModelPortal:C0SVG5 SMR:C0SVG5
EnsemblPlants:AT4G01280.2 GeneID:827903 KEGG:ath:AT4G01280
TAIR:At4g01280 eggNOG:NOG272389 OMA:KSGANEH PhylomeDB:C0SVG5
Genevestigator:C0SVG5 Uniprot:C0SVG5
Length = 303
Score = 115 (45.5 bits), Expect = 0.00027, P = 0.00027
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 131 RKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNR-QLTGGK 189
+K WT++EH +FL L F + DW+ I FV ++T Q+ SHAQKYF + Q +G
Sbjct: 56 KKSRENWTDQEHDKFLEALHLFDR-DWKKIEA-FVGSKTVVQIRSHAQKYFLKVQKSGAN 113
Query: 190 D 190
+
Sbjct: 114 E 114
>TAIR|locus:2151251 [details] [associations]
symbol:LCL1 "LHY/CCA1-like 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0007623 "circadian
rhythm" evidence=IMP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 GO:GO:0005634 EMBL:CP002688
GO:GO:0046686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0007623 GO:GO:0009651 GO:GO:0003700
GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009739 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237512
EMBL:AY519514 EMBL:AJ937209 IPI:IPI00528959 RefSeq:NP_568108.1
RefSeq:NP_850756.1 UniGene:At.20108 ProteinModelPortal:Q6R0G4
SMR:Q6R0G4 STRING:Q6R0G4 EnsemblPlants:AT5G02840.1
EnsemblPlants:AT5G02840.2 GeneID:831766 KEGG:ath:AT5G02840
TAIR:At5g02840 eggNOG:NOG319149 InParanoid:Q6R0G4 OMA:AYTITKS
PhylomeDB:Q6R0G4 ProtClustDB:CLSN2689417 Genevestigator:Q6R0G4
Uniprot:Q6R0G4
Length = 293
Score = 114 (45.2 bits), Expect = 0.00033, P = 0.00033
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 137 WTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYF 181
WTE EH +FL L+ F + DW+ I +FV ++T Q+ SHAQKYF
Sbjct: 51 WTEGEHDKFLEALQLFDR-DWKKIE-DFVGSKTVIQIRSHAQKYF 93
>TAIR|locus:2149589 [details] [associations]
symbol:AT5G52660 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009737 "response
to abscisic acid stimulus" evidence=IEP] [GO:0009739 "response to
gibberellin stimulus" evidence=IEP] [GO:0009751 "response to
salicylic acid stimulus" evidence=IEP] [GO:0009753 "response to
jasmonic acid stimulus" evidence=IEP] [GO:0046686 "response to
cadmium ion" evidence=IEP] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0009737 EMBL:CP002688
GO:GO:0046686 GO:GO:0009753 GO:GO:0009723 GO:GO:0003677
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
HOGENOM:HOG000237512 eggNOG:NOG279643 EMBL:BT002002 EMBL:AY550303
EMBL:BT025882 IPI:IPI00536078 RefSeq:NP_568776.2 UniGene:At.29606
UniGene:At.67328 ProteinModelPortal:Q8H0W3 SMR:Q8H0W3
EnsemblPlants:AT5G52660.2 GeneID:835343 KEGG:ath:AT5G52660
TAIR:At5g52660 InParanoid:Q8H0W3 OMA:STSEPND PhylomeDB:Q8H0W3
ProtClustDB:CLSN2680521 ArrayExpress:Q8H0W3 Genevestigator:Q8H0W3
Uniprot:Q8H0W3
Length = 331
Score = 112 (44.5 bits), Expect = 0.00071, P = 0.00071
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 137 WTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYF 181
WTE EH +FL L+ F + DW+ I F+ ++T Q+ SHAQKYF
Sbjct: 75 WTEPEHDKFLEALQLFDR-DWKKIEA-FIGSKTVIQIRSHAQKYF 117
>TAIR|locus:2200970 [details] [associations]
symbol:LHY "LATE ELONGATED HYPOCOTYL" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA;TAS] [GO:0009651 "response to salt stress"
evidence=IEP;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IEP;RCA] [GO:0009733 "response to auxin stimulus"
evidence=IEP;RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP;RCA] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP;RCA] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP;RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP;RCA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0048574 "long-day photoperiodism, flowering"
evidence=IGI;RCA] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA;IMP] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0007623 "circadian rhythm"
evidence=IGI;RCA] [GO:0009409 "response to cold" evidence=IGI]
[GO:0042754 "negative regulation of circadian rhythm" evidence=IMP]
[GO:0009639 "response to red or far red light" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0046686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0007623 GO:GO:0009651 GO:GO:0009409 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0044212 GO:GO:0009739 GO:GO:0043433
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 GO:GO:0048574 HOGENOM:HOG000084594 GO:GO:0042754
EMBL:AC007323 EMBL:AJ006404 EMBL:AY519507 EMBL:AK316728
EMBL:AK316829 IPI:IPI00517620 RefSeq:NP_001030924.1
RefSeq:NP_171614.1 RefSeq:NP_849568.1 UniGene:At.25466
ProteinModelPortal:Q6R0H1 SMR:Q6R0H1 IntAct:Q6R0H1 STRING:Q6R0H1
PRIDE:Q6R0H1 EnsemblPlants:AT1G01060.1 EnsemblPlants:AT1G01060.2
EnsemblPlants:AT1G01060.3 GeneID:839341 KEGG:ath:AT1G01060
GeneFarm:1653 TAIR:At1g01060 eggNOG:NOG269073 InParanoid:Q6R0H1
KO:K12133 OMA:QKFFTKL PhylomeDB:Q6R0H1 ProtClustDB:CLSN2682827
Uniprot:Q6R0H1
Length = 645
Score = 115 (45.5 bits), Expect = 0.00091, P = 0.00091
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 137 WTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNR 183
WTE+EH +FL L+ +G+ W+ I + + T+T Q+ SHAQK+F +
Sbjct: 27 WTEDEHERFLEALRLYGRA-WQRIEEH-IGTKTAVQIRSHAQKFFTK 71
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.130 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 308 285 0.00085 115 3 11 23 0.43 34
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 56
No. of states in DFA: 616 (65 KB)
Total size of DFA: 228 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.25u 0.13s 24.38t Elapsed: 00:00:01
Total cpu time: 24.26u 0.13s 24.39t Elapsed: 00:00:01
Start: Fri May 10 10:21:40 2013 End: Fri May 10 10:21:41 2013