Query 021756
Match_columns 308
No_of_seqs 240 out of 1366
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 08:50:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021756.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021756hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2k9n_A MYB24; R2R3 domain, DNA 99.9 2.1E-25 7.2E-30 180.9 13.9 103 26-186 1-103 (107)
2 1gv2_A C-MYB, MYB proto-oncoge 99.9 2.9E-25 1E-29 178.9 12.4 101 25-183 3-103 (105)
3 3osg_A MYB21; transcription-DN 99.9 1.6E-24 5.3E-29 180.7 13.5 104 24-186 9-112 (126)
4 1h8a_C AMV V-MYB, MYB transfor 99.9 1.1E-24 3.9E-29 181.5 11.8 106 19-182 20-125 (128)
5 3zqc_A MYB3; transcription-DNA 99.9 2.1E-24 7.1E-29 180.9 11.3 103 26-186 2-104 (131)
6 1h89_C C-MYB, MYB proto-oncoge 99.9 9.1E-23 3.1E-27 175.6 11.2 104 20-181 52-155 (159)
7 1h89_C C-MYB, MYB proto-oncoge 99.9 7.3E-23 2.5E-27 176.2 5.9 100 25-181 5-104 (159)
8 2cqq_A RSGI RUH-037, DNAJ homo 99.8 2.2E-19 7.5E-24 137.0 8.4 66 24-91 6-71 (72)
9 2cjj_A Radialis; plant develop 99.8 2.3E-19 7.7E-24 143.2 7.7 68 25-92 7-74 (93)
10 2cu7_A KIAA1915 protein; nucle 99.7 9.4E-18 3.2E-22 127.2 8.3 64 133-198 8-71 (72)
11 1h8a_C AMV V-MYB, MYB transfor 99.6 1.8E-16 6.2E-21 131.8 5.6 73 55-181 1-73 (128)
12 2cqr_A RSGI RUH-043, DNAJ homo 99.6 3.8E-16 1.3E-20 119.4 6.8 57 23-79 15-71 (73)
13 1wgx_A KIAA1903 protein; MYB D 99.6 8.1E-16 2.8E-20 117.5 6.8 52 25-76 7-58 (73)
14 4eef_G F-HB80.4, designed hema 99.5 1E-15 3.5E-20 116.6 0.9 48 25-72 19-66 (74)
15 1x41_A Transcriptional adaptor 99.5 6.3E-15 2.2E-19 107.9 4.9 49 134-183 8-56 (60)
16 1guu_A C-MYB, MYB proto-oncoge 99.5 1.4E-14 4.6E-19 102.8 6.5 48 134-182 3-50 (52)
17 2elk_A SPCC24B10.08C protein; 99.5 8.4E-15 2.9E-19 106.7 5.4 47 135-182 10-57 (58)
18 2yum_A ZZZ3 protein, zinc fing 99.5 1E-14 3.5E-19 110.9 5.6 51 134-185 8-63 (75)
19 1gvd_A MYB proto-oncogene prot 99.5 2.5E-14 8.5E-19 101.5 5.5 47 134-181 3-49 (52)
20 2xag_B REST corepressor 1; ami 99.5 1.2E-14 4.1E-19 144.7 4.3 50 133-184 379-428 (482)
21 1w0t_A Telomeric repeat bindin 99.5 6.1E-14 2.1E-18 100.0 6.3 48 134-182 2-51 (53)
22 2yus_A SWI/SNF-related matrix- 99.5 5.2E-14 1.8E-18 108.9 6.0 47 132-180 16-62 (79)
23 1ofc_X ISWI protein; nuclear p 99.5 4.1E-14 1.4E-18 134.0 6.5 131 27-182 111-274 (304)
24 2d9a_A B-MYB, MYB-related prot 99.5 3E-14 1E-18 104.0 4.3 48 134-182 8-55 (60)
25 1ity_A TRF1; helix-turn-helix, 99.5 1.1E-13 3.8E-18 103.8 7.2 53 131-184 7-61 (69)
26 2dim_A Cell division cycle 5-l 99.5 6.4E-14 2.2E-18 105.3 5.8 50 24-76 7-56 (70)
27 3sjm_A Telomeric repeat-bindin 99.4 2.1E-13 7.2E-18 101.4 6.8 49 133-182 10-60 (64)
28 2yum_A ZZZ3 protein, zinc fing 99.4 8.5E-13 2.9E-17 100.3 8.1 55 23-77 5-61 (75)
29 2dim_A Cell division cycle 5-l 99.4 3.4E-13 1.2E-17 101.3 5.6 49 133-182 8-56 (70)
30 2eqr_A N-COR1, N-COR, nuclear 99.4 7.2E-13 2.5E-17 97.4 6.9 49 127-177 5-53 (61)
31 2cqr_A RSGI RUH-043, DNAJ homo 99.4 5.7E-13 2E-17 101.7 5.9 50 132-182 16-68 (73)
32 2yus_A SWI/SNF-related matrix- 99.4 5.5E-13 1.9E-17 103.1 5.7 58 24-85 16-74 (79)
33 2din_A Cell division cycle 5-l 99.4 9.8E-13 3.4E-17 97.7 6.6 50 134-186 9-58 (66)
34 1ign_A Protein (RAP1); RAP1,ye 99.3 1.3E-11 4.5E-16 113.0 13.2 136 24-184 6-200 (246)
35 2din_A Cell division cycle 5-l 99.3 2.7E-12 9.4E-17 95.2 6.7 60 20-84 3-62 (66)
36 1x41_A Transcriptional adaptor 99.3 3.1E-12 1E-16 93.5 6.8 50 24-76 6-55 (60)
37 2ltp_A Nuclear receptor corepr 99.0 1.7E-13 5.7E-18 108.1 0.0 49 134-184 16-64 (89)
38 1guu_A C-MYB, MYB proto-oncoge 99.3 3.8E-12 1.3E-16 90.1 6.7 49 25-76 2-50 (52)
39 2ckx_A NGTRF1, telomere bindin 99.3 4.5E-12 1.6E-16 99.0 7.3 50 136-185 2-54 (83)
40 2aje_A Telomere repeat-binding 99.3 5.7E-12 1.9E-16 102.5 7.9 55 130-184 9-66 (105)
41 1gvd_A MYB proto-oncogene prot 99.3 5.4E-12 1.8E-16 89.4 6.6 49 25-76 2-50 (52)
42 2d9a_A B-MYB, MYB-related prot 99.3 7.1E-12 2.4E-16 91.2 7.1 51 23-76 5-55 (60)
43 2elk_A SPCC24B10.08C protein; 99.3 8.4E-12 2.9E-16 90.8 6.3 48 25-75 8-56 (58)
44 2juh_A Telomere binding protei 99.2 1.4E-11 4.7E-16 102.5 8.0 56 129-184 12-70 (121)
45 2llk_A Cyclin-D-binding MYB-li 99.2 8.2E-12 2.8E-16 95.3 5.6 43 133-178 22-64 (73)
46 2roh_A RTBP1, telomere binding 99.2 3E-11 1E-15 100.6 9.2 57 129-185 26-85 (122)
47 3sjm_A Telomeric repeat-bindin 99.2 1.9E-11 6.5E-16 90.8 7.1 50 24-76 9-60 (64)
48 1w0t_A Telomeric repeat bindin 99.2 2.4E-11 8.2E-16 86.5 7.0 47 26-75 2-50 (53)
49 1gv2_A C-MYB, MYB proto-oncoge 99.2 1.5E-11 5E-16 98.6 5.5 47 134-181 4-50 (105)
50 2cjj_A Radialis; plant develop 99.2 3.2E-11 1.1E-15 96.0 6.5 49 135-184 9-60 (93)
51 2cu7_A KIAA1915 protein; nucle 99.2 4.3E-11 1.5E-15 90.4 6.7 52 22-77 5-56 (72)
52 2iw5_B Protein corest, REST co 99.2 1.7E-11 6E-16 111.3 5.1 50 133-184 132-181 (235)
53 2k9n_A MYB24; R2R3 domain, DNA 99.1 4.8E-11 1.6E-15 96.3 5.6 46 135-181 2-47 (107)
54 1ity_A TRF1; helix-turn-helix, 99.1 1.1E-10 3.8E-15 87.3 7.0 50 24-76 8-59 (69)
55 2juh_A Telomere binding protei 99.1 7.1E-11 2.4E-15 98.2 6.3 87 22-159 13-103 (121)
56 3osg_A MYB21; transcription-DN 99.1 7.8E-11 2.7E-15 97.7 6.4 47 133-181 10-56 (126)
57 3zqc_A MYB3; transcription-DNA 99.1 7.1E-11 2.4E-15 98.5 5.8 46 135-181 3-48 (131)
58 2llk_A Cyclin-D-binding MYB-li 99.1 1.3E-10 4.6E-15 88.6 5.8 54 18-76 15-68 (73)
59 2yqk_A Arginine-glutamic acid 99.1 2.2E-10 7.4E-15 84.8 6.6 44 133-177 8-51 (63)
60 1x58_A Hypothetical protein 49 99.0 1.7E-10 5.7E-15 85.4 5.2 48 134-182 8-57 (62)
61 1wgx_A KIAA1903 protein; MYB D 99.0 1.2E-10 4.2E-15 88.9 4.4 45 135-180 9-56 (73)
62 2roh_A RTBP1, telomere binding 99.0 5.9E-10 2E-14 92.8 8.2 50 24-76 29-82 (122)
63 2eqr_A N-COR1, N-COR, nuclear 99.0 4.7E-10 1.6E-14 82.3 6.5 46 25-74 11-56 (61)
64 2crg_A Metastasis associated p 99.0 9.9E-10 3.4E-14 82.9 7.3 43 134-177 8-50 (70)
65 2cqq_A RSGI RUH-037, DNAJ homo 99.0 7.5E-10 2.5E-14 84.2 5.5 44 135-180 9-55 (72)
66 4eef_G F-HB80.4, designed hema 98.8 7.4E-10 2.5E-14 84.4 1.5 44 134-178 20-66 (74)
67 2ltp_A Nuclear receptor corepr 98.3 3.9E-10 1.3E-14 88.7 0.0 52 21-76 11-62 (89)
68 2ckx_A NGTRF1, telomere bindin 98.8 1.3E-08 4.3E-13 79.4 6.7 47 27-76 1-51 (83)
69 1ign_A Protein (RAP1); RAP1,ye 98.8 3.9E-09 1.3E-13 96.7 4.2 50 135-185 9-63 (246)
70 2y9y_A Imitation switch protei 98.7 2.4E-08 8.1E-13 96.8 7.7 135 27-184 124-292 (374)
71 2yqk_A Arginine-glutamic acid 98.7 3.8E-08 1.3E-12 72.6 6.7 47 24-74 7-54 (63)
72 1irz_A ARR10-B; helix-turn-hel 98.7 6E-08 2E-12 72.2 7.2 55 131-186 4-62 (64)
73 4b4c_A Chromodomain-helicase-D 98.6 2.6E-07 8.8E-12 81.9 11.4 50 25-75 6-57 (211)
74 2aje_A Telomere repeat-binding 98.6 7.2E-08 2.5E-12 78.3 6.5 51 23-76 10-64 (105)
75 2crg_A Metastasis associated p 98.5 1.1E-07 3.7E-12 71.7 6.1 45 26-74 8-53 (70)
76 4a69_C Nuclear receptor corepr 98.5 9.1E-08 3.1E-12 76.1 5.4 42 134-177 43-84 (94)
77 1x58_A Hypothetical protein 49 98.5 2.5E-07 8.6E-12 68.4 6.4 48 25-76 7-57 (62)
78 2iw5_B Protein corest, REST co 98.4 2.4E-07 8.2E-12 84.3 5.8 48 25-76 132-179 (235)
79 4a69_C Nuclear receptor corepr 98.3 7.3E-07 2.5E-11 70.8 6.2 45 26-74 43-87 (94)
80 1fex_A TRF2-interacting telome 97.9 1E-05 3.4E-10 59.0 3.7 47 135-181 3-57 (59)
81 3hm5_A DNA methyltransferase 1 97.8 3.9E-05 1.3E-09 60.9 6.6 50 135-186 31-85 (93)
82 2xag_B REST corepressor 1; ami 97.7 3.3E-05 1.1E-09 77.1 5.8 47 25-75 379-425 (482)
83 3hm5_A DNA methyltransferase 1 97.6 9.7E-05 3.3E-09 58.6 6.6 48 27-78 31-83 (93)
84 1ug2_A 2610100B20RIK gene prod 97.6 0.00011 3.9E-09 57.9 5.9 49 27-76 34-82 (95)
85 1fex_A TRF2-interacting telome 97.5 0.00022 7.6E-09 51.8 6.3 50 26-75 2-57 (59)
86 2xb0_X Chromo domain-containin 97.5 0.00064 2.2E-08 63.3 10.7 50 25-75 2-53 (270)
87 1ug2_A 2610100B20RIK gene prod 97.4 0.00033 1.1E-08 55.3 6.8 52 133-185 32-85 (95)
88 2lr8_A CAsp8-associated protei 96.4 3.9E-05 1.3E-09 57.6 0.0 48 27-76 15-62 (70)
89 2lr8_A CAsp8-associated protei 96.2 6.8E-05 2.3E-09 56.2 0.0 49 134-184 14-64 (70)
90 4iej_A DNA methyltransferase 1 96.7 0.0039 1.3E-07 49.4 6.6 48 27-78 31-83 (93)
91 1ofc_X ISWI protein; nuclear p 96.6 0.0027 9.1E-08 60.1 6.4 48 136-184 112-159 (304)
92 2ebi_A DNA binding protein GT- 96.3 0.0058 2E-07 46.8 5.5 54 25-78 3-66 (86)
93 2ebi_A DNA binding protein GT- 96.2 0.0059 2E-07 46.7 4.8 53 134-186 4-68 (86)
94 4iej_A DNA methyltransferase 1 95.8 0.019 6.6E-07 45.4 6.5 51 135-186 31-85 (93)
95 4b4c_A Chromodomain-helicase-D 95.8 0.012 4.1E-07 51.7 5.8 50 135-184 8-60 (211)
96 1irz_A ARR10-B; helix-turn-hel 93.6 0.18 6.2E-06 37.1 6.3 49 25-74 6-56 (64)
97 2y9y_A Imitation switch protei 90.2 0.4 1.4E-05 46.4 6.0 48 136-184 125-173 (374)
98 2xb0_X Chromo domain-containin 77.7 5.3 0.00018 36.9 7.2 44 135-178 4-50 (270)
99 2hzd_A Transcriptional enhance 70.6 9.6 0.00033 29.2 5.8 46 135-180 7-71 (82)
100 2lc3_A E3 ubiquitin-protein li 48.1 8.2 0.00028 29.8 1.9 48 130-183 9-79 (88)
101 2dn0_A Zinc fingers and homeob 36.7 1.1E+02 0.0039 21.7 7.4 55 17-72 3-57 (76)
102 2hzd_A Transcriptional enhance 34.2 63 0.0022 24.6 4.9 51 25-75 5-72 (82)
103 3i4p_A Transcriptional regulat 29.6 69 0.0023 26.1 4.9 40 33-76 4-43 (162)
104 2lm1_A Lysine-specific demethy 26.9 89 0.003 24.0 4.9 29 156-184 67-98 (107)
105 2li6_A SWI/SNF chromatin-remod 26.7 61 0.0021 25.5 3.9 28 156-184 72-99 (116)
106 3cz6_A DNA-binding protein RAP 22.6 47 0.0016 28.6 2.6 17 22-38 110-126 (168)
107 2eqy_A RBP2 like, jumonji, at 22.6 1.4E+02 0.0047 23.7 5.3 29 156-185 65-97 (122)
108 1c20_A DEAD ringer protein; DN 21.9 95 0.0033 24.8 4.2 30 156-185 75-108 (128)
109 2e1c_A Putative HTH-type trans 21.7 1.4E+02 0.0049 24.5 5.5 40 33-76 28-67 (171)
110 2gu0_A Nonstructural protein 2 21.6 26 0.00089 32.4 0.8 32 152-191 218-249 (312)
111 2jrz_A Histone demethylase jar 20.4 95 0.0032 24.5 3.9 29 156-184 63-94 (117)
No 1
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=99.93 E-value=2.1e-25 Score=180.91 Aligned_cols=103 Identities=17% Similarity=0.433 Sum_probs=90.8
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhhhhhhhccCCcCCCCCCCCCccccccccCC
Q 021756 26 GTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDVSDIEAGLIPIPGYGNDSFTLEWVDSNQ 105 (308)
Q Consensus 26 ~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~Dv~~IEag~v~lP~y~~~~f~l~~~~~~~ 105 (308)
++.||+|||++|..+|..|+.. +|..||..|||||..||++||.+.++ |..
T Consensus 1 K~~Wt~eED~~L~~~v~~~g~~---~W~~Ia~~~~~Rt~~qcr~Rw~~~L~------------p~i-------------- 51 (107)
T 2k9n_A 1 KVKFTEEEDLKLQQLVMRYGAK---DWIRISQLMITRNPRQCRERWNNYIN------------PAL-------------- 51 (107)
T ss_dssp CCSSCHHHHHHHHHHHHHHCSS---CHHHHHHHTTTSCHHHHHHHHHHHSS------------SCC--------------
T ss_pred CCCCCHHHHHHHHHHHHHHCCC---CHHHHhhhcCCCCHHHHHHHHHHHHc------------ccc--------------
Confidence 3679999999999999999964 49999999999999999999998764 211
Q ss_pred CCCCCccccCCCCCCCCCCCCCcccccCCCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHHHHHHHHh
Q 021756 106 GYDGLKNFYGPGGKRGSSTRPSDQERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNRQL 185 (308)
Q Consensus 106 ~~dg~~~~~~~ggkR~~~~~~~~~erkKg~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaqky~~r~~ 185 (308)
+.++||+|||.+|+.++.+||. +|..|| .+|++||+.||++||..+.++..
T Consensus 52 ---------------------------~~~~WT~eEd~~L~~~~~~~G~-~W~~Ia-~~l~gRt~~~~k~rw~~l~r~~~ 102 (107)
T 2k9n_A 52 ---------------------------RTDPWSPEEDMLLDQKYAEYGP-KWNKIS-KFLKNRSDNNIRNRWMMIARHRA 102 (107)
T ss_dssp ---------------------------TTCCCCHHHHHHHHHHHHHTCS-CHHHHH-HHHSSSCHHHHHHHHHHHHHHHH
T ss_pred ---------------------------cccccCHHHHHHHHHHHHHhCc-CHHHHH-HHCCCCCHHHHHHHHHHHHhhHH
Confidence 1248999999999999999999 999999 49999999999999998887765
Q ss_pred c
Q 021756 186 T 186 (308)
Q Consensus 186 s 186 (308)
.
T Consensus 103 ~ 103 (107)
T 2k9n_A 103 K 103 (107)
T ss_dssp S
T ss_pred H
Confidence 4
No 2
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=99.92 E-value=2.9e-25 Score=178.85 Aligned_cols=101 Identities=24% Similarity=0.493 Sum_probs=88.4
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhhhhhhhccCCcCCCCCCCCCccccccccC
Q 021756 25 KGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDVSDIEAGLIPIPGYGNDSFTLEWVDSN 104 (308)
Q Consensus 25 ~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~Dv~~IEag~v~lP~y~~~~f~l~~~~~~ 104 (308)
..+.||+|||++|..+|..|+.. +|..||+.|||||..||++||..+++ |..
T Consensus 3 ~k~~WT~eED~~L~~~v~~~g~~---~W~~Ia~~l~~Rt~~qcr~Rw~~~l~------------p~~------------- 54 (105)
T 1gv2_A 3 IKGPWTKEEDQRVIKLVQKYGPK---RWSVIAKHLKGRIGKQCRERWHNHLN------------PEV------------- 54 (105)
T ss_dssp CCSCCCHHHHHHHHHHHHHHCTT---CHHHHHTTSTTCCHHHHHHHHHHTTC------------CCC-------------
T ss_pred CCCCCCHHHHHHHHHHHHHhCCC---cHHHHhhhhcCCCHHHHHHHHHhccC------------Ccc-------------
Confidence 56889999999999999999974 49999999999999999999998753 211
Q ss_pred CCCCCCccccCCCCCCCCCCCCCcccccCCCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHHHHHHH
Q 021756 105 QGYDGLKNFYGPGGKRGSSTRPSDQERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNR 183 (308)
Q Consensus 105 ~~~dg~~~~~~~ggkR~~~~~~~~~erkKg~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaqky~~r 183 (308)
+.++||+|||.+|+.++.+||. +|..|| .+|||||+.||++||..++++
T Consensus 55 ----------------------------~~~~Wt~eEd~~L~~~~~~~G~-~W~~Ia-~~l~gRt~~~~k~rw~~~~~~ 103 (105)
T 1gv2_A 55 ----------------------------KKTSWTEEEDRIIYQAHKRLGN-RWAEIA-KLLPGRTDNAIKNHWNSTMRR 103 (105)
T ss_dssp ----------------------------CCCCCCHHHHHHHHHHHHHHSS-CHHHHH-TTCTTCCHHHHHHHHHHHTC-
T ss_pred ----------------------------cccCCCHHHHHHHHHHHHHhCC-CHHHHH-HHcCCCCHHHHHHHHHHHHhc
Confidence 1248999999999999999998 999999 599999999999999876543
No 3
>3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A
Probab=99.92 E-value=1.6e-24 Score=180.67 Aligned_cols=104 Identities=24% Similarity=0.491 Sum_probs=91.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhhhhhhhccCCcCCCCCCCCCcccccccc
Q 021756 24 SKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDVSDIEAGLIPIPGYGNDSFTLEWVDS 103 (308)
Q Consensus 24 ~~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~Dv~~IEag~v~lP~y~~~~f~l~~~~~ 103 (308)
...+.||+|||++|..+|+.|+. +|..||..|||||..||++||.+.++ |..
T Consensus 9 ~kk~~WT~eED~~L~~~v~~~G~----~W~~Ia~~~~~Rt~~qcr~Rw~~~l~------------p~~------------ 60 (126)
T 3osg_A 9 AKKQKFTPEEDEMLKRAVAQHGS----DWKMIAATFPNRNARQCRDRWKNYLA------------PSI------------ 60 (126)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHTT----CHHHHHHTCTTCCHHHHHHHHHHHTS------------TTS------------
T ss_pred CCCCCCCHHHHHHHHHHHHHhCC----CHHHHHHHcCCCCHHHHHHHHhhhcc------------ccc------------
Confidence 46789999999999999999986 39999999999999999999998764 211
Q ss_pred CCCCCCCccccCCCCCCCCCCCCCcccccCCCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHHHHHHH
Q 021756 104 NQGYDGLKNFYGPGGKRGSSTRPSDQERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNR 183 (308)
Q Consensus 104 ~~~~dg~~~~~~~ggkR~~~~~~~~~erkKg~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaqky~~r 183 (308)
+.++||+|||++|+.++++||. +|..|| .+|++||+.||++||..+.++
T Consensus 61 -----------------------------~~~~WT~eEd~~L~~~v~~~G~-~W~~Ia-~~l~gRt~~~~k~rw~~l~~k 109 (126)
T 3osg_A 61 -----------------------------SHTPWTAEEDALLVQKIQEYGR-QWAIIA-KFFPGRTDIHIKNRWVTISNK 109 (126)
T ss_dssp -----------------------------CCSCCCHHHHHHHHHHHHHHCS-CHHHHH-TTSTTCCHHHHHHHHHHHHHH
T ss_pred -----------------------------ccccCCHHHHHHHHHHHHHHCc-CHHHHH-HHcCCCCHHHHHHHHHHHHHh
Confidence 1248999999999999999998 999999 599999999999999888777
Q ss_pred Hhc
Q 021756 184 QLT 186 (308)
Q Consensus 184 ~~s 186 (308)
+..
T Consensus 110 ~~~ 112 (126)
T 3osg_A 110 LGI 112 (126)
T ss_dssp TTC
T ss_pred cCC
Confidence 654
No 4
>1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3
Probab=99.91 E-value=1.1e-24 Score=181.52 Aligned_cols=106 Identities=25% Similarity=0.472 Sum_probs=90.9
Q ss_pred ceecCCCCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhhhhhhhccCCcCCCCCCCCCccc
Q 021756 19 WLFQESKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDVSDIEAGLIPIPGYGNDSFTL 98 (308)
Q Consensus 19 ~~~~~~~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~Dv~~IEag~v~lP~y~~~~f~l 98 (308)
.|.+....+.||+|||++|..+|..|+.. +|..||..|||||..||++||..+++ |..
T Consensus 20 ~l~p~~~k~~Wt~eED~~L~~~v~~~g~~---~W~~Ia~~l~~Rt~~qcr~Rw~~~l~------------p~~------- 77 (128)
T 1h8a_C 20 VLNPELNKGPWTKEEDQRVIEHVQKYGPK---RWSDIAKHLKGRIGKQCRERWHNHLN------------PEV------- 77 (128)
T ss_dssp --CTTCCCSCCCHHHHHHHHHHHHHTCSC---CHHHHHHHSSSCCHHHHHHHHHHTTC------------SSS-------
T ss_pred hhCCCCCCCCCCHHHHHHHHHHHHHHCCC---CHHHHHHHhcCCcHHHHHHHHHHhcc------------ccc-------
Confidence 34566788999999999999999999964 49999999999999999999998753 210
Q ss_pred cccccCCCCCCCccccCCCCCCCCCCCCCcccccCCCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHH
Q 021756 99 EWVDSNQGYDGLKNFYGPGGKRGSSTRPSDQERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQ 178 (308)
Q Consensus 99 ~~~~~~~~~dg~~~~~~~ggkR~~~~~~~~~erkKg~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaq 178 (308)
+.++||+|||++|+.++++||. +|..|| .+|+|||+.||++||.
T Consensus 78 ----------------------------------~~~~WT~eEd~~L~~~~~~~G~-~W~~Ia-~~l~gRt~~~~k~r~~ 121 (128)
T 1h8a_C 78 ----------------------------------KKTSWTEEEDRIIYQAHKRLGN-RWAEIA-KLLPGRTDNAVKNHWN 121 (128)
T ss_dssp ----------------------------------CCSCCCHHHHHHHHHHHHHHCS-CHHHHG-GGSTTCCHHHHHHHHH
T ss_pred ----------------------------------ccccCCHHHHHHHHHHHHHHCc-CHHHHH-HHCCCCCHHHHHHHHH
Confidence 1248999999999999999998 999999 5999999999999997
Q ss_pred HHHH
Q 021756 179 KYFN 182 (308)
Q Consensus 179 ky~~ 182 (308)
.+++
T Consensus 122 ~~~~ 125 (128)
T 1h8a_C 122 STMR 125 (128)
T ss_dssp TTTT
T ss_pred HHHh
Confidence 6543
No 5
>3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis}
Probab=99.91 E-value=2.1e-24 Score=180.88 Aligned_cols=103 Identities=15% Similarity=0.380 Sum_probs=90.4
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhhhhhhhccCCcCCCCCCCCCccccccccCC
Q 021756 26 GTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDVSDIEAGLIPIPGYGNDSFTLEWVDSNQ 105 (308)
Q Consensus 26 ~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~Dv~~IEag~v~lP~y~~~~f~l~~~~~~~ 105 (308)
++.||+|||++|..+|..|+.. +|..||..|||||..||++||.+.++ |..
T Consensus 2 Kg~Wt~eED~~L~~~v~~~g~~---~W~~Ia~~~~~Rt~~qcr~Rw~~~l~------------p~~-------------- 52 (131)
T 3zqc_A 2 KGPFTEAEDDLIREYVKENGPQ---NWPRITSFLPNRSPKQCRERWFNHLD------------PAV-------------- 52 (131)
T ss_dssp CSSCCHHHHHHHHHHHHHHCSC---CGGGGTTSCTTSCHHHHHHHHHHHTS------------TTC--------------
T ss_pred CCCCCHHHHHHHHHHHHHhCcC---CHHHHHHHHCCCCHHHHHHHHhhccC------------ccc--------------
Confidence 4789999999999999999865 39999999999999999999998764 211
Q ss_pred CCCCCccccCCCCCCCCCCCCCcccccCCCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHHHHHHHHh
Q 021756 106 GYDGLKNFYGPGGKRGSSTRPSDQERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNRQL 185 (308)
Q Consensus 106 ~~dg~~~~~~~ggkR~~~~~~~~~erkKg~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaqky~~r~~ 185 (308)
+.++||+|||.+|+.++.+||. +|..|| .+|+|||+.||++||+.++.+..
T Consensus 53 ---------------------------~~~~Wt~eEd~~L~~~~~~~G~-~W~~Ia-~~l~gRt~~~~k~rw~~~l~~~~ 103 (131)
T 3zqc_A 53 ---------------------------VKHAWTPEEDETIFRNYLKLGS-KWSVIA-KLIPGRTDNAIKNRWNSSISKRI 103 (131)
T ss_dssp ---------------------------CCSCCCHHHHHHHHHHHHHSCS-CHHHHT-TTSTTCCHHHHHHHHHHTTGGGC
T ss_pred ---------------------------cCCCCCHHHHHHHHHHHHHHCc-CHHHHH-HHcCCCCHHHHHHHHHHHHHHHh
Confidence 1248999999999999999998 999999 59999999999999998876654
Q ss_pred c
Q 021756 186 T 186 (308)
Q Consensus 186 s 186 (308)
+
T Consensus 104 ~ 104 (131)
T 3zqc_A 104 S 104 (131)
T ss_dssp C
T ss_pred h
Confidence 3
No 6
>1h89_C C-MYB, MYB proto-oncogene protein; transcription/DNA; 2.45A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 a.4.1.3 PDB: 1h88_C
Probab=99.88 E-value=9.1e-23 Score=175.62 Aligned_cols=104 Identities=24% Similarity=0.468 Sum_probs=90.2
Q ss_pred eecCCCCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhhhhhhhccCCcCCCCCCCCCcccc
Q 021756 20 LFQESKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDVSDIEAGLIPIPGYGNDSFTLE 99 (308)
Q Consensus 20 ~~~~~~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~Dv~~IEag~v~lP~y~~~~f~l~ 99 (308)
|.+....+.||.|||++|..++..|+.. +|..||..|||||..||++||..++. |.
T Consensus 52 l~p~~~~~~Wt~eEd~~L~~~v~~~g~~---~W~~Ia~~l~~Rt~~qcr~Rw~~~l~------------p~--------- 107 (159)
T 1h89_C 52 LNPELIKGPWTKEEDQRVIKLVQKYGPK---RWSVIAKHLKGRIGKQCRERWHNHLN------------PE--------- 107 (159)
T ss_dssp TCTTCCCSCCCHHHHHHHHHHHHHHCSC---CHHHHHHTSTTCCHHHHHHHHHHTTC------------TT---------
T ss_pred cCCCcCCCCCChHHHHHHHHHHHHhCcc---cHHHHHHHcCCCCHHHHHHHHHHHhC------------cc---------
Confidence 4455678999999999999999999864 49999999999999999999988653 21
Q ss_pred ccccCCCCCCCccccCCCCCCCCCCCCCcccccCCCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHHH
Q 021756 100 WVDSNQGYDGLKNFYGPGGKRGSSTRPSDQERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQK 179 (308)
Q Consensus 100 ~~~~~~~~dg~~~~~~~ggkR~~~~~~~~~erkKg~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaqk 179 (308)
.+..+||+|||.+|+.++++||. +|..|| .+|||||+.||++||+.
T Consensus 108 --------------------------------~~~~~WT~eEd~~L~~~~~~~g~-~W~~Ia-~~l~gRt~~~~knr~~~ 153 (159)
T 1h89_C 108 --------------------------------VKKTSWTEEEDRIIYQAHKRLGN-RWAEIA-KLLPGRTDNAIKNHWNS 153 (159)
T ss_dssp --------------------------------SCCSCCCHHHHHHHHHHHHHHCS-CHHHHH-TTSTTCCHHHHHHHHHT
T ss_pred --------------------------------ccccCCChHHHHHHHHHHHHHCC-CHHHHH-HHCCCCCHHHHHHHHHH
Confidence 01248999999999999999998 999999 59999999999999975
Q ss_pred HH
Q 021756 180 YF 181 (308)
Q Consensus 180 y~ 181 (308)
++
T Consensus 154 ~~ 155 (159)
T 1h89_C 154 TM 155 (159)
T ss_dssp TT
T ss_pred HH
Confidence 53
No 7
>1h89_C C-MYB, MYB proto-oncogene protein; transcription/DNA; 2.45A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 a.4.1.3 PDB: 1h88_C
Probab=99.87 E-value=7.3e-23 Score=176.22 Aligned_cols=100 Identities=21% Similarity=0.468 Sum_probs=53.0
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhhhhhhhccCCcCCCCCCCCCccccccccC
Q 021756 25 KGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDVSDIEAGLIPIPGYGNDSFTLEWVDSN 104 (308)
Q Consensus 25 ~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~Dv~~IEag~v~lP~y~~~~f~l~~~~~~ 104 (308)
..+.||+|||++|.++|..|+.+ +|..||+.|||||..||++||..++. |..
T Consensus 5 ~k~~Wt~eED~~L~~~v~~~g~~---~W~~Ia~~l~~Rt~~qcr~Rw~~~l~------------p~~------------- 56 (159)
T 1h89_C 5 GKTRWTREEDEKLKKLVEQNGTD---DWKVIANYLPNRTDVQCQHRWQKVLN------------PEL------------- 56 (159)
T ss_dssp -----------------------------------------CHHHHHHTTTC------------TTC-------------
T ss_pred CCCCCCHHHHHHHHHHHHHhCCC---CHHHHHHHcCCCCHHHHHHHHHHccC------------CCc-------------
Confidence 56789999999999999999864 49999999999999999999987653 210
Q ss_pred CCCCCCccccCCCCCCCCCCCCCcccccCCCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHHHHH
Q 021756 105 QGYDGLKNFYGPGGKRGSSTRPSDQERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYF 181 (308)
Q Consensus 105 ~~~dg~~~~~~~ggkR~~~~~~~~~erkKg~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaqky~ 181 (308)
+.++||+|||.+|+.++++||.++|..|| .++++||+.||++||.+|+
T Consensus 57 ----------------------------~~~~Wt~eEd~~L~~~v~~~g~~~W~~Ia-~~l~~Rt~~qcr~Rw~~~l 104 (159)
T 1h89_C 57 ----------------------------IKGPWTKEEDQRVIKLVQKYGPKRWSVIA-KHLKGRIGKQCRERWHNHL 104 (159)
T ss_dssp ----------------------------CCSCCCHHHHHHHHHHHHHHCSCCHHHHH-HTSTTCCHHHHHHHHHHTT
T ss_pred ----------------------------CCCCCChHHHHHHHHHHHHhCcccHHHHH-HHcCCCCHHHHHHHHHHHh
Confidence 12489999999999999999987899999 5999999999999998774
No 8
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=99.79 E-value=2.2e-19 Score=137.00 Aligned_cols=66 Identities=29% Similarity=0.591 Sum_probs=62.1
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhhhhhhhccCCcCCCCC
Q 021756 24 SKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDVSDIEAGLIPIPGY 91 (308)
Q Consensus 24 ~~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~Dv~~IEag~v~lP~y 91 (308)
+....||.|||++|++||++|+.++++||++||++| |||+.||++||+.|++|+ .||+|.||+|.|
T Consensus 6 ~~~~~WT~eE~k~fe~al~~~p~~t~~RW~~IA~~l-gRt~~eV~~~y~~L~~d~-~~~~G~vp~P~~ 71 (72)
T 2cqq_A 6 SGAPEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHEL-GRSVTDVTTKAKQLKDSV-TCSPGMVSGPSS 71 (72)
T ss_dssp CCCCCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHH-TSCHHHHHHHHHHHHHSC-CCCSCCCSCSCC
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHh-CCCHHHHHHHHHHHHHhc-CccCCCCCCCCC
Confidence 456789999999999999999999999999999998 999999999999999996 689999999987
No 9
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=99.78 E-value=2.3e-19 Score=143.24 Aligned_cols=68 Identities=53% Similarity=0.943 Sum_probs=61.5
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhhhhhhhccCCcCCCCCC
Q 021756 25 KGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDVSDIEAGLIPIPGYG 92 (308)
Q Consensus 25 ~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~Dv~~IEag~v~lP~y~ 92 (308)
....||+|||++|++||+.|+.++++||.+||++|||||..||++||..|++||..||+|.+|+|.|.
T Consensus 7 ~~~~WT~eEd~~L~~al~~~~~~~~~rW~~IA~~vpGRT~~q~k~ry~~l~~dv~~iesg~vp~P~y~ 74 (93)
T 2cjj_A 7 SGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIESGKVPFPNYR 74 (93)
T ss_dssp -CCSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHSSCCC----
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Confidence 45789999999999999999999999999999999999999999999999999999999999999884
No 10
>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=99.72 E-value=9.4e-18 Score=127.19 Aligned_cols=64 Identities=39% Similarity=0.670 Sum_probs=59.4
Q ss_pred CCCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCC
Q 021756 133 KGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNRQLTGGKDKRRSSIHD 198 (308)
Q Consensus 133 Kg~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaqky~~r~~s~~k~krr~Sihd 198 (308)
+.++||+|||++|+++|++||. +|..||+ +|++||+.||++||++|+++....+.+++++|||+
T Consensus 8 ~~~~WT~eEd~~l~~~~~~~G~-~W~~Ia~-~~~~Rt~~q~k~r~~~~l~~~~~~g~~~~~~si~s 71 (72)
T 2cu7_A 8 YSVKWTIEEKELFEQGLAKFGR-RWTKISK-LIGSRTVLQVKSYARQYFKNKVKCGLDKETPNQKT 71 (72)
T ss_dssp CCCCCCHHHHHHHHHHHHHTCS-CHHHHHH-HHSSSCHHHHHHHHHHHHHHHSCSCTTCCCSCCCC
T ss_pred CCCCCCHHHHHHHHHHHHHHCc-CHHHHHH-HcCCCCHHHHHHHHHHHHHHHHhcCCCCCcccccc
Confidence 3469999999999999999999 9999995 99999999999999999999987778889999987
No 11
>1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3
Probab=99.63 E-value=1.8e-16 Score=131.81 Aligned_cols=73 Identities=21% Similarity=0.447 Sum_probs=44.2
Q ss_pred HHhhCCCCCHHHHHHHHHHhhhhhhhhccCCcCCCCCCCCCccccccccCCCCCCCccccCCCCCCCCCCCCCcccccCC
Q 021756 55 VAAMIPGKTVGDVIKQYKELEEDVSDIEAGLIPIPGYGNDSFTLEWVDSNQGYDGLKNFYGPGGKRGSSTRPSDQERKKG 134 (308)
Q Consensus 55 IAa~vPGRT~~qc~~rY~~L~~Dv~~IEag~v~lP~y~~~~f~l~~~~~~~~~dg~~~~~~~ggkR~~~~~~~~~erkKg 134 (308)
||+.|||||..||++||...+. |.. +.
T Consensus 1 Ia~~~~~Rt~~qC~~Rw~~~l~------------p~~-----------------------------------------~k 27 (128)
T 1h8a_C 1 MEAVIKNRTDVQCQHRWQKVLN------------PEL-----------------------------------------NK 27 (128)
T ss_dssp ---------------------C------------TTC-----------------------------------------CC
T ss_pred CccccCCCCHHHHHHHHHHhhC------------CCC-----------------------------------------CC
Confidence 7999999999999999987653 211 12
Q ss_pred CCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHHHHH
Q 021756 135 VPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYF 181 (308)
Q Consensus 135 ~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaqky~ 181 (308)
++||+|||++|+.++++||.++|..|| .+|++||+.||+.||.+|+
T Consensus 28 ~~Wt~eED~~L~~~v~~~g~~~W~~Ia-~~l~~Rt~~qcr~Rw~~~l 73 (128)
T 1h8a_C 28 GPWTKEEDQRVIEHVQKYGPKRWSDIA-KHLKGRIGKQCRERWHNHL 73 (128)
T ss_dssp SCCCHHHHHHHHHHHHHTCSCCHHHHH-HHSSSCCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHCCCCHHHHH-HHhcCCcHHHHHHHHHHhc
Confidence 489999999999999999987899999 5999999999999998764
No 12
>2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=99.63 E-value=3.8e-16 Score=119.41 Aligned_cols=57 Identities=35% Similarity=0.557 Sum_probs=53.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhhhhh
Q 021756 23 ESKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDVS 79 (308)
Q Consensus 23 ~~~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~Dv~ 79 (308)
++....||+|||++|+.||+.|+.++++||.+||++|||||..||++||..|++|+.
T Consensus 15 ~~~~~~WT~eEd~~L~~al~~~g~~~~~rW~~IA~~vpGRT~~qcr~Ry~~L~~d~~ 71 (73)
T 2cqr_A 15 RSAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCVPSKSKEDCIARYKLLVSGPS 71 (73)
T ss_dssp TCSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGCSSSCHHHHHHHHHHHHSSCC
T ss_pred ccCCCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHccc
Confidence 356678999999999999999999999999999999999999999999999998864
No 13
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=99.61 E-value=8.1e-16 Score=117.53 Aligned_cols=52 Identities=23% Similarity=0.450 Sum_probs=49.0
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhh
Q 021756 25 KGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEE 76 (308)
Q Consensus 25 ~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~ 76 (308)
....||+||+++|++||+.|+.++|+||++||++|||||+.||++||.+|+.
T Consensus 7 ~~~~WT~eE~k~fe~ALa~~~~~tp~rWe~IA~~V~gKT~eE~~~hY~~l~~ 58 (73)
T 1wgx_A 7 GDKEWNEKELQKLHCAFASLPKHKPGFWSEVAAAVGSRSPEECQRKYMENPR 58 (73)
T ss_dssp SSSCCCHHHHHHHHHHHHHSCSSSSSHHHHHHHHTTTSCHHHHHHHHHHSSS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCccHHHHHHHHcCCCCHHHHHHHHHHHHh
Confidence 3467999999999999999999999999999999999999999999999865
No 14
>4eef_G F-HB80.4, designed hemagglutinin binding protein; immunoglobulin, fusion of virus membrane with membrane, membrane fusion, sialic acid, virion; HET: NAG BMA; 2.70A {Artificial gene}
Probab=99.53 E-value=1e-15 Score=116.63 Aligned_cols=48 Identities=48% Similarity=0.796 Sum_probs=44.0
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHH
Q 021756 25 KGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYK 72 (308)
Q Consensus 25 ~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~ 72 (308)
.+..||.||+++||+||++|++++|+||++||+.|||||+.||+++|.
T Consensus 19 ss~~WT~eE~K~FE~ALa~yp~~tpdRWekIA~~VpGKT~eEVk~hY~ 66 (74)
T 4eef_G 19 SGRPWKFSENIAFEIALSFTNKDTPDRWKKVAQYVKGRTPEEVKKHYE 66 (74)
T ss_dssp ---CCCTTHHHHHHHHTSSSCSSCCSSSTTTGGGSCSSCHHHHHGGGC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHcCCCCHHHHHHHHH
Confidence 456899999999999999999999999999999999999999999985
No 15
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=99.53 E-value=6.3e-15 Score=107.91 Aligned_cols=49 Identities=29% Similarity=0.611 Sum_probs=45.0
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHHHHHHH
Q 021756 134 GVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNR 183 (308)
Q Consensus 134 g~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaqky~~r 183 (308)
..+||+|||++|+++|++||.++|..|| .+|++||+.||+.||++|+..
T Consensus 8 ~~~WT~eED~~L~~~v~~~G~~~W~~Ia-~~~~~Rt~~qcr~r~~~~l~~ 56 (60)
T 1x41_A 8 DPSWTAQEEMALLEAVMDCGFGNWQDVA-NQMCTKTKEECEKHYMKYFSG 56 (60)
T ss_dssp CSSSCHHHHHHHHHHHHHTCTTCHHHHH-HHHTTSCHHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHHHCcCcHHHHH-HHhCCCCHHHHHHHHHHHccC
Confidence 3589999999999999999977999999 599999999999999998753
No 16
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=99.53 E-value=1.4e-14 Score=102.78 Aligned_cols=48 Identities=31% Similarity=0.550 Sum_probs=44.6
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHHHHHH
Q 021756 134 GVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFN 182 (308)
Q Consensus 134 g~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaqky~~ 182 (308)
.++||+|||++|+.++++||.++|..|| .+|++||+.||+.||++|+.
T Consensus 3 ~~~Wt~eED~~L~~~v~~~G~~~W~~Ia-~~~~~Rt~~qcr~Rw~~~L~ 50 (52)
T 1guu_A 3 KTRWTREEDEKLKKLVEQNGTDDWKVIA-NYLPNRTDVQCQHRWQKVLN 50 (52)
T ss_dssp CCCCCHHHHHHHHHHHHHHCSSCHHHHH-HTSTTCCHHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCHHHHH-HHcCCCCHHHHHHHHHHHcC
Confidence 3589999999999999999999999999 59999999999999998863
No 17
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=99.52 E-value=8.4e-15 Score=106.72 Aligned_cols=47 Identities=23% Similarity=0.537 Sum_probs=44.1
Q ss_pred CCCCHHHHHHHHHHHhhhCCCChhhhhhhhcC-CCCHHHHHHHHHHHHH
Q 021756 135 VPWTEEEHRQFLMGLKKFGKGDWRNISRNFVT-TRTPTQVASHAQKYFN 182 (308)
Q Consensus 135 ~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~-tRT~~Q~~shaqky~~ 182 (308)
.+||+|||++|+++|++||.++|..|| .+|+ +||+.||+.||++||.
T Consensus 10 ~~WT~eED~~L~~~v~~~G~~~W~~IA-~~~~~~Rt~~qcr~r~~~~~~ 57 (58)
T 2elk_A 10 ENWGADEELLLIDACETLGLGNWADIA-DYVGNARTKEECRDHYLKTYI 57 (58)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCHHHHH-HHHCSSCCHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHCcCCHHHHH-HHHCCCCCHHHHHHHHHHHcc
Confidence 489999999999999999977999999 5999 9999999999999874
No 18
>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=1e-14 Score=110.93 Aligned_cols=51 Identities=35% Similarity=0.543 Sum_probs=46.7
Q ss_pred CCCCCHHHHHHHHHHHhhhCC-----CChhhhhhhhcCCCCHHHHHHHHHHHHHHHh
Q 021756 134 GVPWTEEEHRQFLMGLKKFGK-----GDWRNISRNFVTTRTPTQVASHAQKYFNRQL 185 (308)
Q Consensus 134 g~pWTeEE~~llL~gl~kyG~-----G~W~~Iar~~V~tRT~~Q~~shaqky~~r~~ 185 (308)
..+||+|||++|+++|++||. ++|..|| .+|++||+.||++||++|+.++.
T Consensus 8 ~~~WT~eEd~~L~~~v~~~g~~~~~~~~W~~IA-~~~~~Rt~~qcr~r~~~~l~~~~ 63 (75)
T 2yum_A 8 NQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIA-DELGNRTAKQVASQVQKYFIKLT 63 (75)
T ss_dssp SSCCCHHHHHHHHHHHHHSCCCSCHHHHHHHHH-HHHSSSCHHHHHHHHHHHHGGGS
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHH-HHhCCCCHHHHHHHHHHHHHHHH
Confidence 358999999999999999995 5999999 59999999999999999998764
No 19
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=99.49 E-value=2.5e-14 Score=101.53 Aligned_cols=47 Identities=23% Similarity=0.490 Sum_probs=43.6
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHHHHH
Q 021756 134 GVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYF 181 (308)
Q Consensus 134 g~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaqky~ 181 (308)
.++||+|||++|+.++.+||.++|..|| .+|++||+.||+.||++|+
T Consensus 3 k~~Wt~eED~~L~~~v~~~G~~~W~~Ia-~~~~~Rt~~qcr~Rw~~~L 49 (52)
T 1gvd_A 3 KGPWTKEEDQRLIKLVQKYGPKRWSVIA-KHLKGRIGKQCRERWHNHL 49 (52)
T ss_dssp CCSCCHHHHHHHHHHHHHHCTTCHHHHH-TTSTTCCHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHHCcChHHHHH-HHcCCCCHHHHHHHHHHHc
Confidence 3589999999999999999987899999 5999999999999998875
No 20
>2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B*
Probab=99.48 E-value=1.2e-14 Score=144.70 Aligned_cols=50 Identities=26% Similarity=0.491 Sum_probs=46.0
Q ss_pred CCCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHHHHHHHH
Q 021756 133 KGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNRQ 184 (308)
Q Consensus 133 Kg~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaqky~~r~ 184 (308)
...+||+||+.+|++||.+||+ +|..|| .+|+|||..||++||++|.+|+
T Consensus 379 ~~~~WT~eE~~~f~~al~~yGk-dw~~IA-~~VgTKT~~Qvk~fy~~~kkr~ 428 (482)
T 2xag_B 379 CNARWTTEEQLLAVQAIRKYGR-DFQAIS-DVIGNKSVVQVKNFFVNYRRRF 428 (482)
T ss_dssp CCSCCCHHHHHHHHHHHHHHTT-CHHHHH-HHHSSCCHHHHHHHHHHTTTTT
T ss_pred cCCCCCHHHHHHHHHHHHHHCc-CHHHHH-HHhCCCCHHHHHHHHHHHHHHh
Confidence 3579999999999999999999 999999 4899999999999999887665
No 21
>1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A
Probab=99.47 E-value=6.1e-14 Score=100.04 Aligned_cols=48 Identities=23% Similarity=0.482 Sum_probs=44.0
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcC--CCCHHHHHHHHHHHHH
Q 021756 134 GVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVT--TRTPTQVASHAQKYFN 182 (308)
Q Consensus 134 g~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~--tRT~~Q~~shaqky~~ 182 (308)
.++||+|||++|+.+|.+||.++|..|| .+++ +||+.||+.+|.+|.+
T Consensus 2 r~~WT~eEd~~L~~~v~~~G~~~W~~Ia-~~~~~~~Rt~~qcr~Rw~~~~k 51 (53)
T 1w0t_A 2 RQAWLWEEDKNLRSGVRKYGEGNWSKIL-LHYKFNNRTSVMLKDRWRTMKK 51 (53)
T ss_dssp CCCCCHHHHHHHHHHHHHHCTTCHHHHH-HHSCCSSCCHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHCcCCHHHHH-HHcCCCCCCHHHHHHHHHHHHc
Confidence 3589999999999999999988999999 5899 9999999999988754
No 22
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=99.46 E-value=5.2e-14 Score=108.91 Aligned_cols=47 Identities=30% Similarity=0.555 Sum_probs=42.8
Q ss_pred cCCCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHHHH
Q 021756 132 KKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKY 180 (308)
Q Consensus 132 kKg~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaqky 180 (308)
....+||+|||++||+||++|| ++|..|| .+|++||+.||+.||++|
T Consensus 16 ~~~~~WT~eEd~~Ll~~v~~~G-~~W~~IA-~~v~~RT~~qcr~r~~~~ 62 (79)
T 2yus_A 16 SAGREWTEQETLLLLEALEMYK-DDWNKVS-EHVGSRTQDECILHFLRL 62 (79)
T ss_dssp CCSCCCCHHHHHHHHHHHHHSS-SCHHHHH-HHHSSCCHHHHHHHHTTS
T ss_pred ccCCCcCHHHHHHHHHHHHHhC-CCHHHHH-HHcCCCCHHHHHHHHHHh
Confidence 3456999999999999999999 5999999 599999999999999766
No 23
>1ofc_X ISWI protein; nuclear protein, chromatin remodeling factor, ATPase, SANT domain, nucleosome recognition; HET: GLC G4D; 1.9A {Drosophila melanogaster} SCOP: a.4.1.3 a.4.1.13 a.187.1.1 PDB: 2nog_A
Probab=99.46 E-value=4.1e-14 Score=133.96 Aligned_cols=131 Identities=25% Similarity=0.349 Sum_probs=95.7
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhhhh----------hhhccCCcCCCCCCC---
Q 021756 27 TKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDV----------SDIEAGLIPIPGYGN--- 93 (308)
Q Consensus 27 ~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~Dv----------~~IEag~v~lP~y~~--- 93 (308)
+.||+.|...|++|+++||.+. |..||+.|+|||..||+..+.-+.+.. ..||.|...+..+..
T Consensus 111 ~~W~rrdf~~Fi~a~~kyGr~~---~~~IA~ev~~Kt~eEV~~Y~~vFw~ry~ei~d~ek~~~~IE~gE~ki~r~~~~~~ 187 (304)
T 1ofc_X 111 TAWTKRDFNQFIKANEKYGRDD---IDNIAKDVEGKTPEEVIEYNAVFWERCTELQDIERIMGQIERGEGKIQRRLSIKK 187 (304)
T ss_dssp TTCCHHHHHHHHHHHHHHCTTC---HHHHTTSSTTCCHHHHHHHHHHHHHHGGGCTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHhCHHH---HHHHHHHhcCCCHHHHHHHHHHHHHhHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5699999999999999999864 999999999999999977666555443 567777655432110
Q ss_pred ------CCccccccccCCCCCCCccccCCCCCCCCCCCCCcccccCCCCCCHHHHHHHHHHHhhhCC---CChhhhh---
Q 021756 94 ------DSFTLEWVDSNQGYDGLKNFYGPGGKRGSSTRPSDQERKKGVPWTEEEHRQFLMGLKKFGK---GDWRNIS--- 161 (308)
Q Consensus 94 ------~~f~l~~~~~~~~~dg~~~~~~~ggkR~~~~~~~~~erkKg~pWTeEE~~llL~gl~kyG~---G~W~~Ia--- 161 (308)
..+..+|....-.+. ..++..||+|||+.||.+|.+||. |.|..|.
T Consensus 188 ~l~~Ki~~~~~P~~~L~i~y~----------------------~~k~k~yteeEDRfLL~~l~k~G~~~~g~we~Ir~~I 245 (304)
T 1ofc_X 188 ALDQKMSRYRAPFHQLRLQYG----------------------NNKGKNYTEIEDRFLVCMLHKLGFDKENVYEELRAAI 245 (304)
T ss_dssp HHHHHHHTCSSHHHHCCCCCT----------------------TCCCSSCCHHHHHHHHHHHHHHCTTSTTHHHHHHHHH
T ss_pred HHHHHHHHhcCcHHHhccccC----------------------CCCCCccCHHHHHHHHHHHHHhcCCCcchHHHHHHHH
Confidence 111112222110010 013458999999999999999999 9999996
Q ss_pred h--------hhcCCCCHHHHHHHHHHHHH
Q 021756 162 R--------NFVTTRTPTQVASHAQKYFN 182 (308)
Q Consensus 162 r--------~~V~tRT~~Q~~shaqky~~ 182 (308)
| -||.+||+.+|..|++-++.
T Consensus 246 r~~p~FrFDwf~kSRTp~el~rRc~tLi~ 274 (304)
T 1ofc_X 246 RASPQFRFDWFIKSRTALELQRRCNTLIT 274 (304)
T ss_dssp HHCGGGTTCHHHHTCCHHHHHHHHHHHHH
T ss_pred HhCcchhhhHHHhcCCHHHHHHHHHHHHH
Confidence 2 37999999999999975543
No 24
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=99.46 E-value=3e-14 Score=103.95 Aligned_cols=48 Identities=27% Similarity=0.523 Sum_probs=44.1
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHHHHHH
Q 021756 134 GVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFN 182 (308)
Q Consensus 134 g~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaqky~~ 182 (308)
..+||+|||++|+.++.+||.++|..|| .+|++||+.||++||++|+.
T Consensus 8 k~~Wt~eED~~L~~~v~~~G~~~W~~Ia-~~~~~Rt~~qcr~Rw~~~l~ 55 (60)
T 2d9a_A 8 KVKWTHEEDEQLRALVRQFGQQDWKFLA-SHFPNRTDQQCQYRWLRVLS 55 (60)
T ss_dssp CSCCCHHHHHHHHHHHHHTCTTCHHHHH-HHCSSSCHHHHHHHHHHTSC
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCHHHHH-HHccCCCHHHHHHHHHHHcC
Confidence 4699999999999999999976999999 59999999999999988754
No 25
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=99.46 E-value=1.1e-13 Score=103.79 Aligned_cols=53 Identities=23% Similarity=0.466 Sum_probs=47.8
Q ss_pred ccCCCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcC--CCCHHHHHHHHHHHHHHH
Q 021756 131 RKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVT--TRTPTQVASHAQKYFNRQ 184 (308)
Q Consensus 131 rkKg~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~--tRT~~Q~~shaqky~~r~ 184 (308)
+++..+||+|||.+|+.+|++||.++|..|| .+++ +||+.||+.||.+|+...
T Consensus 7 ~~~r~~WT~eED~~L~~~v~~~G~~~W~~Ia-~~~~~~~Rt~~qcr~Rw~~~l~p~ 61 (69)
T 1ity_A 7 ARKRQAWLWEEDKNLRSGVRKYGEGNWSKIL-LHYKFNNRTSVMLKDRWRTMKKLK 61 (69)
T ss_dssp SSSCCCCCHHHHHHHHHHHHHHCSSCHHHHH-HHSCCSSCCHHHHHHHHHHHHHTS
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCcHHHHH-HHcCcCCCCHHHHHHHHHHHcCCC
Confidence 4556799999999999999999988999999 5899 999999999999887654
No 26
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=6.4e-14 Score=105.27 Aligned_cols=50 Identities=22% Similarity=0.526 Sum_probs=45.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhh
Q 021756 24 SKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEE 76 (308)
Q Consensus 24 ~~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~ 76 (308)
...+.||+|||++|..+|..|+.. +|..||..|||||..||++||..++.
T Consensus 7 ~k~~~Wt~eED~~L~~~v~~~G~~---~W~~Ia~~l~~Rt~~qcr~Rw~~~L~ 56 (70)
T 2dim_A 7 GKGGVWRNTEDEILKAAVMKYGKN---QWSRIASLLHRKSAKQCKARWYEWLD 56 (70)
T ss_dssp STTCCCCHHHHHHHHHHHHHTCSS---CHHHHHHHSTTCCHHHHHHHHHHTSC
T ss_pred CCCCCCCHHHHHHHHHHHHHHCcC---CHHHHHHHhcCCCHHHHHHHHHHHcC
Confidence 466899999999999999999954 49999999999999999999998764
No 27
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=99.43 E-value=2.1e-13 Score=101.44 Aligned_cols=49 Identities=29% Similarity=0.513 Sum_probs=43.5
Q ss_pred CCCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcC--CCCHHHHHHHHHHHHH
Q 021756 133 KGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVT--TRTPTQVASHAQKYFN 182 (308)
Q Consensus 133 Kg~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~--tRT~~Q~~shaqky~~ 182 (308)
+..+||+|||++|+++|++||.++|..||+ +++ +||+.||+.+|.++.+
T Consensus 10 kk~~WT~eED~~L~~~V~~~G~~~W~~Ia~-~~~~~~Rt~~qcr~Rw~nl~k 60 (64)
T 3sjm_A 10 KKQKWTVEESEWVKAGVQKYGEGNWAAISK-NYPFVNRTAVMIKDRWRTMKR 60 (64)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCTTCHHHHHH-HSCCSSCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHccCCCchHHHHh-hcCCCCCCHHHHHHHHHHHhc
Confidence 345899999999999999999989999995 655 9999999999988754
No 28
>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=8.5e-13 Score=100.27 Aligned_cols=55 Identities=27% Similarity=0.438 Sum_probs=48.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCC--ChhHHHHHhhCCCCCHHHHHHHHHHhhhh
Q 021756 23 ESKGTKWTPQENKQFENALAVYDKDT--PDRWIKVAAMIPGKTVGDVIKQYKELEED 77 (308)
Q Consensus 23 ~~~~~~WT~EEdk~Le~Ala~y~~~t--~dRW~~IAa~vPGRT~~qc~~rY~~L~~D 77 (308)
....+.||+|||++|+++|+.|+.++ +++|..||++|||||..||++||..++..
T Consensus 5 ~~~~~~WT~eEd~~L~~~v~~~g~~~~~~~~W~~IA~~~~~Rt~~qcr~r~~~~l~~ 61 (75)
T 2yum_A 5 SSGNQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASQVQKYFIK 61 (75)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHSCCCSCHHHHHHHHHHHHSSSCHHHHHHHHHHHHGG
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 34668899999999999999999765 37899999999999999999999777653
No 29
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=3.4e-13 Score=101.29 Aligned_cols=49 Identities=20% Similarity=0.531 Sum_probs=44.4
Q ss_pred CCCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHHHHHH
Q 021756 133 KGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFN 182 (308)
Q Consensus 133 Kg~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaqky~~ 182 (308)
+.++||+|||++|+.+|++||.++|..|| .+|++||+.||+.||.+|+.
T Consensus 8 k~~~Wt~eED~~L~~~v~~~G~~~W~~Ia-~~l~~Rt~~qcr~Rw~~~L~ 56 (70)
T 2dim_A 8 KGGVWRNTEDEILKAAVMKYGKNQWSRIA-SLLHRKSAKQCKARWYEWLD 56 (70)
T ss_dssp TTCCCCHHHHHHHHHHHHHTCSSCHHHHH-HHSTTCCHHHHHHHHHHTSC
T ss_pred CCCCCCHHHHHHHHHHHHHHCcCCHHHHH-HHhcCCCHHHHHHHHHHHcC
Confidence 34699999999999999999977999999 59999999999999988754
No 30
>2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=7.2e-13 Score=97.44 Aligned_cols=49 Identities=16% Similarity=0.256 Sum_probs=44.7
Q ss_pred CcccccCCCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHH
Q 021756 127 SDQERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHA 177 (308)
Q Consensus 127 ~~~erkKg~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~sha 177 (308)
.+.+|+...+||+||+++|+++|.+||+ +|..|| .+|++||..||..||
T Consensus 5 ~~~~r~~~~~WT~eE~~~F~~~~~~~gk-~w~~Ia-~~l~~rt~~~~v~~Y 53 (61)
T 2eqr_A 5 SSGDRQFMNVWTDHEKEIFKDKFIQHPK-NFGLIA-SYLERKSVPDCVLYY 53 (61)
T ss_dssp CCCCCSCCCSCCHHHHHHHHHHHHHSTT-CHHHHH-HHCTTSCHHHHHHHH
T ss_pred cccccccCCCCCHHHHHHHHHHHHHhCC-CHHHHH-HHcCCCCHHHHHHHH
Confidence 3456777789999999999999999998 999999 699999999999986
No 31
>2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=99.37 E-value=5.7e-13 Score=101.73 Aligned_cols=50 Identities=16% Similarity=0.500 Sum_probs=43.8
Q ss_pred cCCCCCCHHHHHHHHHHHhhhCCC---ChhhhhhhhcCCCCHHHHHHHHHHHHH
Q 021756 132 KKGVPWTEEEHRQFLMGLKKFGKG---DWRNISRNFVTTRTPTQVASHAQKYFN 182 (308)
Q Consensus 132 kKg~pWTeEE~~llL~gl~kyG~G---~W~~Iar~~V~tRT~~Q~~shaqky~~ 182 (308)
....+||.|||++|+.+|.+||.+ +|.+|| .+|||||+.||++||+.+..
T Consensus 16 ~~~~~WT~eEd~~L~~al~~~g~~~~~rW~~IA-~~vpGRT~~qcr~Ry~~L~~ 68 (73)
T 2cqr_A 16 SAEEPWTQNQQKLLELALQQYPRGSSDCWDKIA-RCVPSKSKEDCIARYKLLVS 68 (73)
T ss_dssp CSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHG-GGCSSSCHHHHHHHHHHHHS
T ss_pred cCCCCCCHHHHHHHHHHHHHcCCCCCchHHHHH-HHcCCCCHHHHHHHHHHHHH
Confidence 345689999999999999999942 899999 59999999999999987643
No 32
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=99.36 E-value=5.5e-13 Score=103.15 Aligned_cols=58 Identities=31% Similarity=0.469 Sum_probs=50.6
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHh-hhhhhhhccCC
Q 021756 24 SKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKEL-EEDVSDIEAGL 85 (308)
Q Consensus 24 ~~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L-~~Dv~~IEag~ 85 (308)
.....||+|||++|++||++|+ + +|.+||.+|+|||..||+.||.++ ++|+..+|++-
T Consensus 16 ~~~~~WT~eEd~~Ll~~v~~~G-~---~W~~IA~~v~~RT~~qcr~r~~~~~i~d~~~~~~~~ 74 (79)
T 2yus_A 16 SAGREWTEQETLLLLEALEMYK-D---DWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDS 74 (79)
T ss_dssp CCSCCCCHHHHHHHHHHHHHSS-S---CHHHHHHHHSSCCHHHHHHHHTTSCCCCSSCCCCCC
T ss_pred ccCCCcCHHHHHHHHHHHHHhC-C---CHHHHHHHcCCCCHHHHHHHHHHhcccccccccCCC
Confidence 4567899999999999999999 2 599999999999999999999998 77776666543
No 33
>2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=9.8e-13 Score=97.67 Aligned_cols=50 Identities=24% Similarity=0.452 Sum_probs=45.7
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHHHHHHHHhc
Q 021756 134 GVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNRQLT 186 (308)
Q Consensus 134 g~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaqky~~r~~s 186 (308)
..+||+|||++|+.+++.||. +|..||. +++||+.||++||+.|+.....
T Consensus 9 k~~WT~eED~~L~~~~~~~g~-~W~~Ia~--~~gRt~~qcr~Rw~~~l~~~~~ 58 (66)
T 2din_A 9 KTEWSREEEEKLLHLAKLMPT-QWRTIAP--IIGRTAAQCLEHYEFLLDKAAQ 58 (66)
T ss_dssp CCCCCHHHHHHHHHHHHHCTT-CHHHHHH--HHSSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCC-CHHHHhc--ccCcCHHHHHHHHHHHhChHhc
Confidence 458999999999999999999 9999994 6789999999999999888754
No 34
>1ign_A Protein (RAP1); RAP1,yeast,telomeres,homoeodomain, DNA binding protein/DNA complex; HET: DNA; 2.25A {Saccharomyces cerevisiae} SCOP: a.4.1.6 a.4.1.6 PDB: 3ukg_A
Probab=99.32 E-value=1.3e-11 Score=112.95 Aligned_cols=136 Identities=13% Similarity=0.183 Sum_probs=89.9
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCC--CChhHHHHHhhCCCCCHHHHHHHHHHhhhhhhhhccCCcCCCCCCCCCcccccc
Q 021756 24 SKGTKWTPQENKQFENALAVYDKD--TPDRWIKVAAMIPGKTVGDVIKQYKELEEDVSDIEAGLIPIPGYGNDSFTLEWV 101 (308)
Q Consensus 24 ~~~~~WT~EEdk~Le~Ala~y~~~--t~dRW~~IAa~vPGRT~~qc~~rY~~L~~Dv~~IEag~v~lP~y~~~~f~l~~~ 101 (308)
.....||+|||++|..++.+||.. +...|..||.+|||||..+|++||..++..- ++- .|..+.......
T Consensus 6 ~~k~~FT~EED~~Ile~v~k~Gn~r~ghk~W~~IAk~LpGRT~nsIRnRw~~~L~~~--ln~------vy~~ded~~Li~ 77 (246)
T 1ign_A 6 HNKASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHYVPNHTGNSIRHRFRVYLSKR--LEY------VYEVDKFGKLVR 77 (246)
T ss_dssp --CCCCCHHHHHHHHHHHHTSGGGTTCSHHHHHHTTTSTTSCHHHHHHHHHHTTGGG--CCC------EECBCTTSCBCB
T ss_pred CCCCCCCHHHHHHHHHHHHHhCcCccccccHHHHHHHcCCCCHHHHHHHHHHHHhhh--ccc------ccccCcchhhhh
Confidence 456799999999999999999863 2334999999999999999999999876531 110 011110000000
Q ss_pred ccCCCCCCCccccCCCCCCCCCCCCCcccccCCCCCCHHHHHHHHHHHhh-h----------------------------
Q 021756 102 DSNQGYDGLKNFYGPGGKRGSSTRPSDQERKKGVPWTEEEHRQFLMGLKK-F---------------------------- 152 (308)
Q Consensus 102 ~~~~~~dg~~~~~~~ggkR~~~~~~~~~erkKg~pWTeEE~~llL~gl~k-y---------------------------- 152 (308)
. ..|. +.......+ .. ...||.|||-.|...+++ |
T Consensus 78 d-------------~~Gn-~ikis~lp~-si-K~rftaeeDy~L~~~i~~~f~~~~~~~d~~~g~~~~~~~~~~~~~~~~ 141 (246)
T 1ign_A 78 D-------------DDGN-LIKTKVLPP-SI-KRKFSADEDYTLAIAVKKQFYRDLFQIDPDTGRSLITDEDTPTAIARR 141 (246)
T ss_dssp C-------------TTSC-BCEESSCCC-CS-CCCCCHHHHHHHHHHHHHHHHHHHHCBCSSSCCBCC------------
T ss_pred c-------------cCCC-ceeeeccCc-cc-cCccchhccHHHHHHHHHHHhhhhhhcCccccccccccccchhhhhhh
Confidence 0 0000 100000111 11 237999999999999987 2
Q ss_pred ----C------------------------CCChhhhhhhhcCCCCHHHHHHHHHHHHHHH
Q 021756 153 ----G------------------------KGDWRNISRNFVTTRTPTQVASHAQKYFNRQ 184 (308)
Q Consensus 153 ----G------------------------~G~W~~Iar~~V~tRT~~Q~~shaqky~~r~ 184 (308)
| .+.|+.|| .++|+||...+++||.|+.+..
T Consensus 142 ~~~~~~~~~~~~~~~f~~~~~~~~~gp~~~~~fk~ia-~~~P~HT~~SWRdRyrKfl~~~ 200 (246)
T 1ign_A 142 NMTMDPNHVPGSEPNFAAYRTQSRRGPIAREFFKHFA-EEHAAHTENAWRDRFRKFLLAY 200 (246)
T ss_dssp -------------------CCCCCCCCCCTTHHHHHH-HHTTTSCHHHHHHHHHHTHHHH
T ss_pred hcccCccccccCCcchhhhccccccCcchHHHHHHHH-HHCCCCChhhHHHHHHHHHhhc
Confidence 1 13799999 5999999999999999887665
No 35
>2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=2.7e-12 Score=95.25 Aligned_cols=60 Identities=20% Similarity=0.447 Sum_probs=53.0
Q ss_pred eecCCCCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhhhhhhhccC
Q 021756 20 LFQESKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEEDVSDIEAG 84 (308)
Q Consensus 20 ~~~~~~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~Dv~~IEag 84 (308)
|.+....+.||.|||++|..++..|+. +|..||. +||||..||++||..++.+...+|+|
T Consensus 3 L~P~~~k~~WT~eED~~L~~~~~~~g~----~W~~Ia~-~~gRt~~qcr~Rw~~~l~~~~~~~~~ 62 (66)
T 2din_A 3 SGSSGKKTEWSREEEEKLLHLAKLMPT----QWRTIAP-IIGRTAAQCLEHYEFLLDKAAQRDSG 62 (66)
T ss_dssp CSSSSSCCCCCHHHHHHHHHHHHHCTT----CHHHHHH-HHSSCHHHHHHHHHHHHHHHHHSSSC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCC----CHHHHhc-ccCcCHHHHHHHHHHHhChHhcCCCC
Confidence 445667889999999999999999986 4999999 88999999999999999887776665
No 36
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=99.31 E-value=3.1e-12 Score=93.54 Aligned_cols=50 Identities=26% Similarity=0.325 Sum_probs=45.4
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhh
Q 021756 24 SKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEE 76 (308)
Q Consensus 24 ~~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~ 76 (308)
.....||+|||++|.++|+.|+.+ +|..||++|||||..||++||..++.
T Consensus 6 ~~~~~WT~eED~~L~~~v~~~G~~---~W~~Ia~~~~~Rt~~qcr~r~~~~l~ 55 (60)
T 1x41_A 6 SGDPSWTAQEEMALLEAVMDCGFG---NWQDVANQMCTKTKEECEKHYMKYFS 55 (60)
T ss_dssp CCCSSSCHHHHHHHHHHHHHTCTT---CHHHHHHHHTTSCHHHHHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHHHHHHHHCcC---cHHHHHHHhCCCCHHHHHHHHHHHcc
Confidence 466889999999999999999964 49999999999999999999998764
No 37
>2ltp_A Nuclear receptor corepressor 2; SMRT, TRAC, SGC, structural genomics consortium, NESG, north structural genomics consortium; NMR {Homo sapiens}
Probab=98.99 E-value=1.7e-13 Score=108.08 Aligned_cols=49 Identities=33% Similarity=0.500 Sum_probs=45.9
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHHHHHHHH
Q 021756 134 GVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNRQ 184 (308)
Q Consensus 134 g~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaqky~~r~ 184 (308)
.++||+|||.+|+.++.+||. +|..|| .+|+|||+.||++||+.|+++.
T Consensus 16 ~~~WT~eEd~~l~~~~~~~G~-~W~~IA-~~l~gRt~~q~k~r~~~~lrk~ 64 (89)
T 2ltp_A 16 FQGWTEEEMGTAKKGLLEHGR-NWSAIA-RMVGSKTVSQCKNFYFNYKKRQ 64 (89)
Confidence 469999999999999999999 999999 5999999999999999998776
No 38
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=99.31 E-value=3.8e-12 Score=90.09 Aligned_cols=49 Identities=18% Similarity=0.466 Sum_probs=44.4
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhh
Q 021756 25 KGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEE 76 (308)
Q Consensus 25 ~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~ 76 (308)
..+.||.|||++|..+|..|+.+ +|..||..|||||..||++||..+++
T Consensus 2 ~~~~Wt~eED~~L~~~v~~~G~~---~W~~Ia~~~~~Rt~~qcr~Rw~~~L~ 50 (52)
T 1guu_A 2 GKTRWTREEDEKLKKLVEQNGTD---DWKVIANYLPNRTDVQCQHRWQKVLN 50 (52)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCSS---CHHHHHHTSTTCCHHHHHHHHHHHHS
T ss_pred CCCCCCHHHHHHHHHHHHHhCCC---CHHHHHHHcCCCCHHHHHHHHHHHcC
Confidence 46789999999999999999974 49999999999999999999998874
No 39
>2ckx_A NGTRF1, telomere binding protein TBP1; nuclear protein; 1.9A {Nicotiana tabacum} SCOP: a.4.1.3 PDB: 2qhb_A
Probab=99.29 E-value=4.5e-12 Score=98.97 Aligned_cols=50 Identities=16% Similarity=0.384 Sum_probs=45.5
Q ss_pred CCCHHHHHHHHHHHhhhCCCChhhhhhh---hcCCCCHHHHHHHHHHHHHHHh
Q 021756 136 PWTEEEHRQFLMGLKKFGKGDWRNISRN---FVTTRTPTQVASHAQKYFNRQL 185 (308)
Q Consensus 136 pWTeEE~~llL~gl~kyG~G~W~~Iar~---~V~tRT~~Q~~shaqky~~r~~ 185 (308)
|||+|||+.|+.||++||.|+|+.|++. ++++||+.||+++|.+++++..
T Consensus 2 ~WT~eEd~~L~~gv~k~G~g~W~~I~~~~~~~~~~RT~~~lKdrWrnllk~~~ 54 (83)
T 2ckx_A 2 PFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNADHRTYVDLKDKWKTLVHTAS 54 (83)
T ss_dssp CCCHHHHHHHHHHHHHHCSSCHHHHHHHHCTTCTTSCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCcHHHHHhhccccCCCCHHHHHHHHHHHHHhcc
Confidence 7999999999999999999999999964 3899999999999999877553
No 40
>2aje_A Telomere repeat-binding protein; DNA-binding, Trp, MYB motif, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.3
Probab=99.29 E-value=5.7e-12 Score=102.49 Aligned_cols=55 Identities=18% Similarity=0.397 Sum_probs=47.9
Q ss_pred cccCCCCCCHHHHHHHHHHHhhhCCCChhhhhhhh---cCCCCHHHHHHHHHHHHHHH
Q 021756 130 ERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNF---VTTRTPTQVASHAQKYFNRQ 184 (308)
Q Consensus 130 erkKg~pWTeEE~~llL~gl~kyG~G~W~~Iar~~---V~tRT~~Q~~shaqky~~r~ 184 (308)
.+++..+||+|||++|+.||++||.|+|+.|++.+ +++||+.+|+.+|.+++++-
T Consensus 9 ~rr~r~~WT~EEd~~L~~gV~k~G~g~W~~I~~~~~~~f~~RT~v~lKdrWrnllk~~ 66 (105)
T 2aje_A 9 QRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLCAFEDADHRTYVDLKDKWKTLVHTA 66 (105)
T ss_dssp CCCCCCSCCHHHHHHHHHHHHHHCSSSHHHHHSSSSSSTTCCCHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhCCCChHHHHHHhccccCCCCHHHHHHHHHHHHhhc
Confidence 45566799999999999999999999999999643 38999999999999876643
No 41
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=99.28 E-value=5.4e-12 Score=89.38 Aligned_cols=49 Identities=16% Similarity=0.389 Sum_probs=44.6
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhh
Q 021756 25 KGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEE 76 (308)
Q Consensus 25 ~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~ 76 (308)
..+.||+|||++|..+|..|+.. +|..||..|||||..||++||..++.
T Consensus 2 ~k~~Wt~eED~~L~~~v~~~G~~---~W~~Ia~~~~~Rt~~qcr~Rw~~~L~ 50 (52)
T 1gvd_A 2 IKGPWTKEEDQRLIKLVQKYGPK---RWSVIAKHLKGRIGKQCRERWHNHLN 50 (52)
T ss_dssp CCCSCCHHHHHHHHHHHHHHCTT---CHHHHHTTSTTCCHHHHHHHHHHTTS
T ss_pred CCCCCCHHHHHHHHHHHHHHCcC---hHHHHHHHcCCCCHHHHHHHHHHHcC
Confidence 46789999999999999999964 49999999999999999999998764
No 42
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=99.28 E-value=7.1e-12 Score=91.24 Aligned_cols=51 Identities=20% Similarity=0.403 Sum_probs=46.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhh
Q 021756 23 ESKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEE 76 (308)
Q Consensus 23 ~~~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~ 76 (308)
....+.||+|||++|..+|..|+.. +|..||.+|||||..||++||..++.
T Consensus 5 ~~~k~~Wt~eED~~L~~~v~~~G~~---~W~~Ia~~~~~Rt~~qcr~Rw~~~l~ 55 (60)
T 2d9a_A 5 SSGKVKWTHEEDEQLRALVRQFGQQ---DWKFLASHFPNRTDQQCQYRWLRVLS 55 (60)
T ss_dssp CCCCSCCCHHHHHHHHHHHHHTCTT---CHHHHHHHCSSSCHHHHHHHHHHTSC
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCC---CHHHHHHHccCCCHHHHHHHHHHHcC
Confidence 3467899999999999999999953 49999999999999999999998875
No 43
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=99.25 E-value=8.4e-12 Score=90.76 Aligned_cols=48 Identities=15% Similarity=0.293 Sum_probs=43.3
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCC-CCCHHHHHHHHHHhh
Q 021756 25 KGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIP-GKTVGDVIKQYKELE 75 (308)
Q Consensus 25 ~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vP-GRT~~qc~~rY~~L~ 75 (308)
..+.||+|||++|..+|++|+.+ +|..||.+|| |||..||++||.++.
T Consensus 8 ~~~~WT~eED~~L~~~v~~~G~~---~W~~IA~~~~~~Rt~~qcr~r~~~~~ 56 (58)
T 2elk_A 8 FDENWGADEELLLIDACETLGLG---NWADIADYVGNARTKEECRDHYLKTY 56 (58)
T ss_dssp CCCCCCHHHHHHHHHHHHHTTTT---CHHHHHHHHCSSCCHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHCcC---CHHHHHHHHCCCCCHHHHHHHHHHHc
Confidence 35679999999999999999965 4999999999 999999999998763
No 44
>2juh_A Telomere binding protein TBP1; helix, nucleus, nuclear protein; NMR {Nicotiana glutinosa}
Probab=99.24 E-value=1.4e-11 Score=102.52 Aligned_cols=56 Identities=16% Similarity=0.385 Sum_probs=49.2
Q ss_pred ccccCCCCCCHHHHHHHHHHHhhhCCCChhhhhhhh---cCCCCHHHHHHHHHHHHHHH
Q 021756 129 QERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNF---VTTRTPTQVASHAQKYFNRQ 184 (308)
Q Consensus 129 ~erkKg~pWTeEE~~llL~gl~kyG~G~W~~Iar~~---V~tRT~~Q~~shaqky~~r~ 184 (308)
..+++..+||+||+++|+.||++||.|+|..|++.+ +++||+.||+++|.++++..
T Consensus 12 ~~rr~r~~WT~EEd~~L~~gV~k~G~G~W~~Ia~~~~~~f~~RT~v~lKdRWrnllk~~ 70 (121)
T 2juh_A 12 SQRRIRRPFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNADHRTYVDLKDKWKTLVHTA 70 (121)
T ss_dssp CCCCSSCCCCHHHHHHHHHHHHHHGGGCHHHHHHHHCSCCSSCCSHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHhccccCCCCHHHHHHHHHHHHhhh
Confidence 345666799999999999999999999999999754 59999999999999987754
No 45
>2llk_A Cyclin-D-binding MYB-like transcription factor 1; helix bundle, SGC, structural genomics consortium, NESG, NOR structural genomics consortium; NMR {Homo sapiens}
Probab=99.23 E-value=8.2e-12 Score=95.32 Aligned_cols=43 Identities=23% Similarity=0.322 Sum_probs=39.6
Q ss_pred CCCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHH
Q 021756 133 KGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQ 178 (308)
Q Consensus 133 Kg~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaq 178 (308)
+.++||+|||++|++++++||. +|..||+ ++ +||+.||++||.
T Consensus 22 ~k~~wT~EED~~L~~l~~~~G~-kW~~IA~-~l-gRt~~q~knRw~ 64 (73)
T 2llk_A 22 HVGKYTPEEIEKLKELRIKHGN-DWATIGA-AL-GRSASSVKDRCR 64 (73)
T ss_dssp CCCSSCHHHHHHHHHHHHHHSS-CHHHHHH-HH-TSCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCC-CHHHHHH-Hh-CCCHHHHHHHHH
Confidence 3469999999999999999999 7999995 78 999999999996
No 46
>2roh_A RTBP1, telomere binding protein-1; plant, nucleus, DNA binding protein; NMR {Oryza sativa}
Probab=99.23 E-value=3e-11 Score=100.60 Aligned_cols=57 Identities=19% Similarity=0.366 Sum_probs=49.4
Q ss_pred ccccCCCCCCHHHHHHHHHHHhhhCCCChhhhhhhh---cCCCCHHHHHHHHHHHHHHHh
Q 021756 129 QERKKGVPWTEEEHRQFLMGLKKFGKGDWRNISRNF---VTTRTPTQVASHAQKYFNRQL 185 (308)
Q Consensus 129 ~erkKg~pWTeEE~~llL~gl~kyG~G~W~~Iar~~---V~tRT~~Q~~shaqky~~r~~ 185 (308)
..+++..+||+|||+.|++||++||.|+|..|++.+ +++||..||+.+|.++++.-.
T Consensus 26 ~~rr~r~~WT~EEd~~L~~gV~k~G~g~W~~I~~~~~~~~~~RT~vdlKdRWrnllk~~~ 85 (122)
T 2roh_A 26 GQRRIRRPFTVAEVELLVEAVEHLGTGRWRDVKFRAFENVHHRTYVDLKDKWKTLVHTAS 85 (122)
T ss_dssp CCCCCCCCCCHHHHHHHHHHHHHHSSSCHHHHHHHHHSSSCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCChHHHHHHhccccCCCCHHHHHHHHHHHHhhcc
Confidence 345566799999999999999999999999999743 489999999999999876553
No 47
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=99.22 E-value=1.9e-11 Score=90.84 Aligned_cols=50 Identities=18% Similarity=0.484 Sum_probs=44.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCC--CCCHHHHHHHHHHhhh
Q 021756 24 SKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIP--GKTVGDVIKQYKELEE 76 (308)
Q Consensus 24 ~~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vP--GRT~~qc~~rY~~L~~ 76 (308)
...+.||+|||++|..+|+.|+.+. |..||+.+| |||..||++||..++.
T Consensus 9 ~kk~~WT~eED~~L~~~V~~~G~~~---W~~Ia~~~~~~~Rt~~qcr~Rw~nl~k 60 (64)
T 3sjm_A 9 TKKQKWTVEESEWVKAGVQKYGEGN---WAAISKNYPFVNRTAVMIKDRWRTMKR 60 (64)
T ss_dssp -CCCCCCHHHHHHHHHHHHHHCTTC---HHHHHHHSCCSSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHccCCCc---hHHHHhhcCCCCCCHHHHHHHHHHHhc
Confidence 4678899999999999999999753 999999977 9999999999999875
No 48
>1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A
Probab=99.22 E-value=2.4e-11 Score=86.50 Aligned_cols=47 Identities=15% Similarity=0.392 Sum_probs=43.6
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCC--CCCHHHHHHHHHHhh
Q 021756 26 GTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIP--GKTVGDVIKQYKELE 75 (308)
Q Consensus 26 ~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vP--GRT~~qc~~rY~~L~ 75 (308)
.+.||+|||++|..+|+.||.+ +|..||..|| |||..||++||..++
T Consensus 2 r~~WT~eEd~~L~~~v~~~G~~---~W~~Ia~~~~~~~Rt~~qcr~Rw~~~~ 50 (53)
T 1w0t_A 2 RQAWLWEEDKNLRSGVRKYGEG---NWSKILLHYKFNNRTSVMLKDRWRTMK 50 (53)
T ss_dssp CCCCCHHHHHHHHHHHHHHCTT---CHHHHHHHSCCSSCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcC---CHHHHHHHcCCCCCCHHHHHHHHHHHH
Confidence 5789999999999999999964 4999999999 999999999999876
No 49
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=99.19 E-value=1.5e-11 Score=98.56 Aligned_cols=47 Identities=23% Similarity=0.477 Sum_probs=43.4
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHHHHH
Q 021756 134 GVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYF 181 (308)
Q Consensus 134 g~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaqky~ 181 (308)
.++||+|||++|+.+|++||.++|..|| .+|++||+.||+.||.+|+
T Consensus 4 k~~WT~eED~~L~~~v~~~g~~~W~~Ia-~~l~~Rt~~qcr~Rw~~~l 50 (105)
T 1gv2_A 4 KGPWTKEEDQRVIKLVQKYGPKRWSVIA-KHLKGRIGKQCRERWHNHL 50 (105)
T ss_dssp CSCCCHHHHHHHHHHHHHHCTTCHHHHH-TTSTTCCHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHhCCCcHHHHh-hhhcCCCHHHHHHHHHhcc
Confidence 3589999999999999999988999999 5999999999999998764
No 50
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=99.17 E-value=3.2e-11 Score=96.02 Aligned_cols=49 Identities=29% Similarity=0.588 Sum_probs=44.2
Q ss_pred CCCCHHHHHHHHHHHhhhCC---CChhhhhhhhcCCCCHHHHHHHHHHHHHHH
Q 021756 135 VPWTEEEHRQFLMGLKKFGK---GDWRNISRNFVTTRTPTQVASHAQKYFNRQ 184 (308)
Q Consensus 135 ~pWTeEE~~llL~gl~kyG~---G~W~~Iar~~V~tRT~~Q~~shaqky~~r~ 184 (308)
.+||.|||++|+.+|.+||. .+|.+|| .+|||||+.||++||+.++...
T Consensus 9 ~~WT~eEd~~L~~al~~~~~~~~~rW~~IA-~~vpGRT~~q~k~ry~~l~~dv 60 (93)
T 2cjj_A 9 RPWSAKENKAFERALAVYDKDTPDRWANVA-RAVEGRTPEEVKKHYEILVEDI 60 (93)
T ss_dssp CSCCHHHHHHHHHHHHHSCTTCTTHHHHHH-HHSTTCCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCCCchHHHHH-HHcCCCCHHHHHHHHHHHHHHH
Confidence 48999999999999999984 3799999 5999999999999999887665
No 51
>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=99.17 E-value=4.3e-11 Score=90.35 Aligned_cols=52 Identities=29% Similarity=0.539 Sum_probs=46.8
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhhh
Q 021756 22 QESKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEED 77 (308)
Q Consensus 22 ~~~~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~D 77 (308)
+....+.||.|||++|..+++.||. +|..||.+|||||..||+.||..++..
T Consensus 5 p~~~~~~WT~eEd~~l~~~~~~~G~----~W~~Ia~~~~~Rt~~q~k~r~~~~l~~ 56 (72)
T 2cu7_A 5 SSGYSVKWTIEEKELFEQGLAKFGR----RWTKISKLIGSRTVLQVKSYARQYFKN 56 (72)
T ss_dssp CSSCCCCCCHHHHHHHHHHHHHTCS----CHHHHHHHHSSSCHHHHHHHHHHHHHH
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHCc----CHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 3457789999999999999999997 499999999999999999999988653
No 52
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=99.16 E-value=1.7e-11 Score=111.31 Aligned_cols=50 Identities=26% Similarity=0.474 Sum_probs=45.7
Q ss_pred CCCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHHHHHHHH
Q 021756 133 KGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNRQ 184 (308)
Q Consensus 133 Kg~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaqky~~r~ 184 (308)
...+||+||+++|++||.+||+ +|..||+ +|+|||..||++||.+|.+|+
T Consensus 132 ~s~~WTeEE~~lFleAl~kYGK-DW~~IAk-~VgTKT~~QcKnfY~~~kKRl 181 (235)
T 2iw5_B 132 CNARWTTEEQLLAVQAIRKYGR-DFQAISD-VIGNKSVVQVKNFFVNYRRRF 181 (235)
T ss_dssp CCSSCCHHHHHHHHHHHHHHSS-CHHHHHH-HHSSCCHHHHHHHHHHTTTTT
T ss_pred cCCCCCHHHHHHHHHHHHHHCc-CHHHHHH-HcCCCCHHHHHHHHHHHHHHh
Confidence 3468999999999999999999 9999995 999999999999999887664
No 53
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=99.13 E-value=4.8e-11 Score=96.27 Aligned_cols=46 Identities=33% Similarity=0.574 Sum_probs=43.0
Q ss_pred CCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHHHHH
Q 021756 135 VPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYF 181 (308)
Q Consensus 135 ~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaqky~ 181 (308)
++||+|||.+|+.+|.+||.++|..|| .+|++||+.||+.||.+|+
T Consensus 2 ~~Wt~eED~~L~~~v~~~g~~~W~~Ia-~~~~~Rt~~qcr~Rw~~~L 47 (107)
T 2k9n_A 2 VKFTEEEDLKLQQLVMRYGAKDWIRIS-QLMITRNPRQCRERWNNYI 47 (107)
T ss_dssp CSSCHHHHHHHHHHHHHHCSSCHHHHH-HHTTTSCHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHHCCCCHHHHh-hhcCCCCHHHHHHHHHHHH
Confidence 479999999999999999988999999 5999999999999998774
No 54
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=99.12 E-value=1.1e-10 Score=87.30 Aligned_cols=50 Identities=16% Similarity=0.397 Sum_probs=45.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCC--CCCHHHHHHHHHHhhh
Q 021756 24 SKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIP--GKTVGDVIKQYKELEE 76 (308)
Q Consensus 24 ~~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vP--GRT~~qc~~rY~~L~~ 76 (308)
...+.||+|||++|..+|+.||.+ +|..||..|| |||..||++||..++.
T Consensus 8 ~~r~~WT~eED~~L~~~v~~~G~~---~W~~Ia~~~~~~~Rt~~qcr~Rw~~~l~ 59 (69)
T 1ity_A 8 RKRQAWLWEEDKNLRSGVRKYGEG---NWSKILLHYKFNNRTSVMLKDRWRTMKK 59 (69)
T ss_dssp SSCCCCCHHHHHHHHHHHHHHCSS---CHHHHHHHSCCSSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCC---cHHHHHHHcCcCCCCHHHHHHHHHHHcC
Confidence 456889999999999999999964 3999999999 9999999999999876
No 55
>2juh_A Telomere binding protein TBP1; helix, nucleus, nuclear protein; NMR {Nicotiana glutinosa}
Probab=99.11 E-value=7.1e-11 Score=98.22 Aligned_cols=87 Identities=17% Similarity=0.286 Sum_probs=69.6
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhC----CCCCHHHHHHHHHHhhhhhhhhccCCcCCCCCCCCCcc
Q 021756 22 QESKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMI----PGKTVGDVIKQYKELEEDVSDIEAGLIPIPGYGNDSFT 97 (308)
Q Consensus 22 ~~~~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~v----PGRT~~qc~~rY~~L~~Dv~~IEag~v~lP~y~~~~f~ 97 (308)
.....+.||.|||+.|..+|++||.+ +|..||..+ +|||..||++||..++.-. .|+ |
T Consensus 13 ~rr~r~~WT~EEd~~L~~gV~k~G~G---~W~~Ia~~~~~~f~~RT~v~lKdRWrnllk~~-~~~------p-------- 74 (121)
T 2juh_A 13 QRRIRRPFSVAEVEALVEAVEHLGTG---RWRDVKMRAFDNADHRTYVDLKDKWKTLVHTA-SIA------P-------- 74 (121)
T ss_dssp CCCSSCCCCHHHHHHHHHHHHHHGGG---CHHHHHHHHCSCCSSCCSHHHHHHHHHHHHHH-HTC------S--------
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCC---CHHHHHHHhccccCCCCHHHHHHHHHHHHhhh-ccC------C--------
Confidence 34567899999999999999999975 499999984 8999999999999987510 000 0
Q ss_pred ccccccCCCCCCCccccCCCCCCCCCCCCCcccccCCCCCCHHHHHHHHHHHhhhCCCChhh
Q 021756 98 LEWVDSNQGYDGLKNFYGPGGKRGSSTRPSDQERKKGVPWTEEEHRQFLMGLKKFGKGDWRN 159 (308)
Q Consensus 98 l~~~~~~~~~dg~~~~~~~ggkR~~~~~~~~~erkKg~pWTeEE~~llL~gl~kyG~G~W~~ 159 (308)
..+++.+|++||+.+++.+...||. +|.+
T Consensus 75 --------------------------------~~krg~~~p~e~~~rv~~~h~~~gn-~~~~ 103 (121)
T 2juh_A 75 --------------------------------QQRRGEPVPQDLLDRVLAAHAYWSQ-QQGK 103 (121)
T ss_dssp --------------------------------TTCCCSCCCHHHHHHHHHHHHHHHH-HHCC
T ss_pred --------------------------------cccCCCCCCHHHHHHHHHHHHHHcc-chhc
Confidence 0112448999999999999999998 7766
No 56
>3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A
Probab=99.11 E-value=7.8e-11 Score=97.69 Aligned_cols=47 Identities=23% Similarity=0.430 Sum_probs=43.7
Q ss_pred CCCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHHHHH
Q 021756 133 KGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYF 181 (308)
Q Consensus 133 Kg~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaqky~ 181 (308)
+.++||+|||++|+.++.+||. +|..|| .+|++||+.||+.||.+|+
T Consensus 10 kk~~WT~eED~~L~~~v~~~G~-~W~~Ia-~~~~~Rt~~qcr~Rw~~~l 56 (126)
T 3osg_A 10 KKQKFTPEEDEMLKRAVAQHGS-DWKMIA-ATFPNRNARQCRDRWKNYL 56 (126)
T ss_dssp SSCCCCHHHHHHHHHHHHHHTT-CHHHHH-HTCTTCCHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHhCC-CHHHHH-HHcCCCCHHHHHHHHhhhc
Confidence 4468999999999999999999 999999 5999999999999998875
No 57
>3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis}
Probab=99.10 E-value=7.1e-11 Score=98.49 Aligned_cols=46 Identities=26% Similarity=0.434 Sum_probs=43.3
Q ss_pred CCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHHHHH
Q 021756 135 VPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYF 181 (308)
Q Consensus 135 ~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaqky~ 181 (308)
++||+|||++|+.+|.+||.++|..|| .+|++||+.||+.||.+|+
T Consensus 3 g~Wt~eED~~L~~~v~~~g~~~W~~Ia-~~~~~Rt~~qcr~Rw~~~l 48 (131)
T 3zqc_A 3 GPFTEAEDDLIREYVKENGPQNWPRIT-SFLPNRSPKQCRERWFNHL 48 (131)
T ss_dssp SSCCHHHHHHHHHHHHHHCSCCGGGGT-TSCTTSCHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHhCcCCHHHHH-HHHCCCCHHHHHHHHhhcc
Confidence 489999999999999999988999999 5999999999999998875
No 58
>2llk_A Cyclin-D-binding MYB-like transcription factor 1; helix bundle, SGC, structural genomics consortium, NESG, NOR structural genomics consortium; NMR {Homo sapiens}
Probab=99.07 E-value=1.3e-10 Score=88.59 Aligned_cols=54 Identities=17% Similarity=0.377 Sum_probs=46.6
Q ss_pred CceecCCCCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhh
Q 021756 18 NWLFQESKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEE 76 (308)
Q Consensus 18 ~~~~~~~~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~ 76 (308)
|.|.+....+.||+|||++|.++++.||.. |..||..| |||..||++||..|..
T Consensus 15 ~~ldP~i~k~~wT~EED~~L~~l~~~~G~k----W~~IA~~l-gRt~~q~knRw~~L~~ 68 (73)
T 2llk_A 15 YFQGDRNHVGKYTPEEIEKLKELRIKHGND----WATIGAAL-GRSASSVKDRCRLMKD 68 (73)
T ss_dssp ----CCCCCCSSCHHHHHHHHHHHHHHSSC----HHHHHHHH-TSCHHHHHHHHHHCSC
T ss_pred eecCCCCCCCCCCHHHHHHHHHHHHHHCCC----HHHHHHHh-CCCHHHHHHHHHHHHH
Confidence 456678889999999999999999999964 99999999 9999999999998764
No 59
>2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.07 E-value=2.2e-10 Score=84.79 Aligned_cols=44 Identities=23% Similarity=0.579 Sum_probs=40.3
Q ss_pred CCCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHH
Q 021756 133 KGVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHA 177 (308)
Q Consensus 133 Kg~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~sha 177 (308)
+..+||+||+++|++||.+||+ +|..|++++|++||..||..+|
T Consensus 8 ~~~~WT~eE~~~Fe~~l~~yGK-df~~I~~~~v~~Kt~~~~v~fY 51 (63)
T 2yqk_A 8 IEKCWTEDEVKRFVKGLRQYGK-NFFRIRKELLPNKETGELITFY 51 (63)
T ss_dssp CCCSCCHHHHHHHHHHHHHTCS-CHHHHHHHSCTTSCHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHhCc-cHHHHHHHHcCCCcHHHHHHHH
Confidence 3468999999999999999999 9999996579999999999886
No 60
>1x58_A Hypothetical protein 4930532D21RIK; MUS musculus adult MALE testis cDNA, riken FULL-length enriched library, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.1
Probab=99.05 E-value=1.7e-10 Score=85.36 Aligned_cols=48 Identities=23% Similarity=0.450 Sum_probs=42.4
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCChhhhhh--hhcCCCCHHHHHHHHHHHHH
Q 021756 134 GVPWTEEEHRQFLMGLKKFGKGDWRNISR--NFVTTRTPTQVASHAQKYFN 182 (308)
Q Consensus 134 g~pWTeEE~~llL~gl~kyG~G~W~~Iar--~~V~tRT~~Q~~shaqky~~ 182 (308)
+.+||+||++.|++||++||+ +|..|+. .|+++||...++++|....+
T Consensus 8 r~~WT~EE~~~L~~gV~k~G~-~W~~I~~~y~f~~~RT~VdLKdk~r~L~k 57 (62)
T 1x58_A 8 RKDFTKEEVNYLFHGVKTMGN-HWNSILWSFPFQKGRRAVDLAHKYHRLIS 57 (62)
T ss_dssp SSSCCHHHHHHHHHHHHHHCS-CHHHHHHHSCCCTTCCHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHhH-hHHHHHHhCCCccCcccchHHHHHHHHHh
Confidence 358999999999999999999 9999994 27899999999999976543
No 61
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=99.04 E-value=1.2e-10 Score=88.85 Aligned_cols=45 Identities=20% Similarity=0.457 Sum_probs=40.8
Q ss_pred CCCCHHHHHHHHHHHhhhCC---CChhhhhhhhcCCCCHHHHHHHHHHH
Q 021756 135 VPWTEEEHRQFLMGLKKFGK---GDWRNISRNFVTTRTPTQVASHAQKY 180 (308)
Q Consensus 135 ~pWTeEE~~llL~gl~kyG~---G~W~~Iar~~V~tRT~~Q~~shaqky 180 (308)
.+||+||+++|+.||..|++ ++|.+|| .+|+|||..+|+.||+.+
T Consensus 9 ~~WT~eE~k~fe~ALa~~~~~tp~rWe~IA-~~V~gKT~eE~~~hY~~l 56 (73)
T 1wgx_A 9 KEWNEKELQKLHCAFASLPKHKPGFWSEVA-AAVGSRSPEECQRKYMEN 56 (73)
T ss_dssp SCCCHHHHHHHHHHHHHSCSSSSSHHHHHH-HHTTTSCHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHCCCCCccHHHHHH-HHcCCCCHHHHHHHHHHH
Confidence 37999999999999999987 4899999 599999999999998654
No 62
>2roh_A RTBP1, telomere binding protein-1; plant, nucleus, DNA binding protein; NMR {Oryza sativa}
Probab=99.03 E-value=5.9e-10 Score=92.81 Aligned_cols=50 Identities=20% Similarity=0.229 Sum_probs=45.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhC----CCCCHHHHHHHHHHhhh
Q 021756 24 SKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMI----PGKTVGDVIKQYKELEE 76 (308)
Q Consensus 24 ~~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~v----PGRT~~qc~~rY~~L~~ 76 (308)
...+.||.|||+.|..+|++||.+ +|..|+..+ +|||..||++||.+++.
T Consensus 29 r~r~~WT~EEd~~L~~gV~k~G~g---~W~~I~~~~~~~~~~RT~vdlKdRWrnllk 82 (122)
T 2roh_A 29 RIRRPFTVAEVELLVEAVEHLGTG---RWRDVKFRAFENVHHRTYVDLKDKWKTLVH 82 (122)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHSSS---CHHHHHHHHHSSSCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCC---ChHHHHHHhccccCCCCHHHHHHHHHHHHh
Confidence 456889999999999999999986 499999974 89999999999999874
No 63
>2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.02 E-value=4.7e-10 Score=82.28 Aligned_cols=46 Identities=22% Similarity=0.305 Sum_probs=41.9
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHh
Q 021756 25 KGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKEL 74 (308)
Q Consensus 25 ~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L 74 (308)
....||+||+++|+.+++.||.+ |..||++|||||+.||+++|..-
T Consensus 11 ~~~~WT~eE~~~F~~~~~~~gk~----w~~Ia~~l~~rt~~~~v~~Yy~~ 56 (61)
T 2eqr_A 11 FMNVWTDHEKEIFKDKFIQHPKN----FGLIASYLERKSVPDCVLYYYLT 56 (61)
T ss_dssp CCCSCCHHHHHHHHHHHHHSTTC----HHHHHHHCTTSCHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHhCCC----HHHHHHHcCCCCHHHHHHHHHHh
Confidence 45789999999999999999864 99999999999999999999754
No 64
>2crg_A Metastasis associated protein MTA3; transcription factor, helix turn helix, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.3
Probab=98.98 E-value=9.9e-10 Score=82.94 Aligned_cols=43 Identities=26% Similarity=0.477 Sum_probs=40.0
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHH
Q 021756 134 GVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHA 177 (308)
Q Consensus 134 g~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~sha 177 (308)
..+||+||+++|++||.+||+ +|..|++++|++||..||..+|
T Consensus 8 ~~~WT~eE~~~Fe~~l~~yGK-df~~I~~~~v~~Kt~~~~v~fY 50 (70)
T 2crg_A 8 MEEWSASEACLFEEALEKYGK-DFNDIRQDFLPWKSLTSIIEYY 50 (70)
T ss_dssp SCCCCHHHHHHHHHHHHHTCS-CHHHHHHTTCSSSCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCc-cHHHHHHHHcCCCCHHHHHHHH
Confidence 358999999999999999999 9999996579999999999987
No 65
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=98.95 E-value=7.5e-10 Score=84.19 Aligned_cols=44 Identities=32% Similarity=0.579 Sum_probs=39.7
Q ss_pred CCCCHHHHHHHHHHHhhhCCC---ChhhhhhhhcCCCCHHHHHHHHHHH
Q 021756 135 VPWTEEEHRQFLMGLKKFGKG---DWRNISRNFVTTRTPTQVASHAQKY 180 (308)
Q Consensus 135 ~pWTeEE~~llL~gl~kyG~G---~W~~Iar~~V~tRT~~Q~~shaqky 180 (308)
.+||.||+++|+.+|.+|+.| +|.+||. ++ +||..||++||+++
T Consensus 9 ~~WT~eE~k~fe~al~~~p~~t~~RW~~IA~-~l-gRt~~eV~~~y~~L 55 (72)
T 2cqq_A 9 PEWTEEDLSQLTRSMVKFPGGTPGRWEKIAH-EL-GRSVTDVTTKAKQL 55 (72)
T ss_dssp CCCCHHHHHHHHHHHHHSCTTCTTHHHHHHH-HH-TSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCcHHHHHHH-Hh-CCCHHHHHHHHHHH
Confidence 489999999999999999854 7999995 77 89999999999876
No 66
>4eef_G F-HB80.4, designed hemagglutinin binding protein; immunoglobulin, fusion of virus membrane with membrane, membrane fusion, sialic acid, virion; HET: NAG BMA; 2.70A {Artificial gene}
Probab=98.83 E-value=7.4e-10 Score=84.37 Aligned_cols=44 Identities=32% Similarity=0.677 Sum_probs=39.8
Q ss_pred CCCCCHHHHHHHHHHHhhhCCC---ChhhhhhhhcCCCCHHHHHHHHH
Q 021756 134 GVPWTEEEHRQFLMGLKKFGKG---DWRNISRNFVTTRTPTQVASHAQ 178 (308)
Q Consensus 134 g~pWTeEE~~llL~gl~kyG~G---~W~~Iar~~V~tRT~~Q~~shaq 178 (308)
+.+||.||+++|+.||.+|+++ +|.+|| ..|||||..+|+.||+
T Consensus 20 s~~WT~eE~K~FE~ALa~yp~~tpdRWekIA-~~VpGKT~eEVk~hY~ 66 (74)
T 4eef_G 20 GRPWKFSENIAFEIALSFTNKDTPDRWKKVA-QYVKGRTPEEVKKHYE 66 (74)
T ss_dssp --CCCTTHHHHHHHHTSSSCSSCCSSSTTTG-GGSCSSCHHHHHGGGC
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCCcHHHHHH-HHcCCCCHHHHHHHHH
Confidence 3589999999999999999986 899999 5999999999999986
No 67
>2ltp_A Nuclear receptor corepressor 2; SMRT, TRAC, SGC, structural genomics consortium, NESG, north structural genomics consortium; NMR {Homo sapiens}
Probab=98.33 E-value=3.9e-10 Score=88.69 Aligned_cols=52 Identities=21% Similarity=0.300 Sum_probs=46.3
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhh
Q 021756 21 FQESKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEE 76 (308)
Q Consensus 21 ~~~~~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~ 76 (308)
......+.||.|||.+|..++..||. +|..||.+|||||..||+.||..++.
T Consensus 11 ~p~~~~~~WT~eEd~~l~~~~~~~G~----~W~~IA~~l~gRt~~q~k~r~~~~lr 62 (89)
T 2ltp_A 11 RENLYFQGWTEEEMGTAKKGLLEHGR----NWSAIARMVGSKTVSQCKNFYFNYKK 62 (89)
Confidence 34557789999999999999999986 39999999999999999999987764
No 68
>2ckx_A NGTRF1, telomere binding protein TBP1; nuclear protein; 1.9A {Nicotiana tabacum} SCOP: a.4.1.3 PDB: 2qhb_A
Probab=98.76 E-value=1.3e-08 Score=79.42 Aligned_cols=47 Identities=17% Similarity=0.249 Sum_probs=43.2
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCChhHHHHHhh----CCCCCHHHHHHHHHHhhh
Q 021756 27 TKWTPQENKQFENALAVYDKDTPDRWIKVAAM----IPGKTVGDVIKQYKELEE 76 (308)
Q Consensus 27 ~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~----vPGRT~~qc~~rY~~L~~ 76 (308)
+.||.|||+.|..+|++||.+. |..|+.. |+|||..||++||.+++.
T Consensus 1 r~WT~eEd~~L~~gv~k~G~g~---W~~I~~~~~~~~~~RT~~~lKdrWrnllk 51 (83)
T 2ckx_A 1 RPFSVAEVEALVEAVEHLGTGR---WRDVKMRAFDNADHRTYVDLKDKWKTLVH 51 (83)
T ss_dssp CCCCHHHHHHHHHHHHHHCSSC---HHHHHHHHCTTCTTSCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCC---cHHHHHhhccccCCCCHHHHHHHHHHHHH
Confidence 4699999999999999999864 9999996 899999999999999874
No 69
>1ign_A Protein (RAP1); RAP1,yeast,telomeres,homoeodomain, DNA binding protein/DNA complex; HET: DNA; 2.25A {Saccharomyces cerevisiae} SCOP: a.4.1.6 a.4.1.6 PDB: 3ukg_A
Probab=98.76 E-value=3.9e-09 Score=96.66 Aligned_cols=50 Identities=22% Similarity=0.387 Sum_probs=45.1
Q ss_pred CCCCHHHHHHHHHHHhhhCCCC-----hhhhhhhhcCCCCHHHHHHHHHHHHHHHh
Q 021756 135 VPWTEEEHRQFLMGLKKFGKGD-----WRNISRNFVTTRTPTQVASHAQKYFNRQL 185 (308)
Q Consensus 135 ~pWTeEE~~llL~gl~kyG~G~-----W~~Iar~~V~tRT~~Q~~shaqky~~r~~ 185 (308)
.+||+|||++||+++++||..+ |..|| .+++|||+.||++||..|+++..
T Consensus 9 ~~FT~EED~~Ile~v~k~Gn~r~ghk~W~~IA-k~LpGRT~nsIRnRw~~~L~~~l 63 (246)
T 1ign_A 9 ASFTDEEDEFILDVVRKNPTRRTTHTLYDEIS-HYVPNHTGNSIRHRFRVYLSKRL 63 (246)
T ss_dssp CCCCHHHHHHHHHHHHTSGGGTTCSHHHHHHT-TTSTTSCHHHHHHHHHHTTGGGC
T ss_pred CCCCHHHHHHHHHHHHHhCcCccccccHHHHH-HHcCCCCHHHHHHHHHHHHhhhc
Confidence 5899999999999999999843 99999 59999999999999999877653
No 70
>2y9y_A Imitation switch protein 1 (DEL_ATPase); transcription, nuclear protein complex, chromatin remodeling nucleosome remodeling; 3.25A {Saccharomyces cerevisiae} PDB: 2y9z_A
Probab=98.69 E-value=2.4e-08 Score=96.76 Aligned_cols=135 Identities=21% Similarity=0.307 Sum_probs=89.1
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCC-CCCHHHHHHHHHHhh------hh----hhhhccCCcCCCCCC---
Q 021756 27 TKWTPQENKQFENALAVYDKDTPDRWIKVAAMIP-GKTVGDVIKQYKELE------ED----VSDIEAGLIPIPGYG--- 92 (308)
Q Consensus 27 ~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vP-GRT~~qc~~rY~~L~------~D----v~~IEag~v~lP~y~--- 92 (308)
+.||+.|-..|.+|+++||.+. ...||+.|. |||..||...++-+. .| +..||.|...+-...
T Consensus 124 ~~WnrrDF~~FI~a~~kyGR~d---~~~IA~ev~~~Kt~eEV~~Y~~vFw~Ry~Ei~d~erii~~IEkgE~ki~r~~~~~ 200 (374)
T 2y9y_A 124 TNWNKLEFRKFITVSGKYGRNS---IQAIARELAPGKTLEEVRAYAKAFWSNIERIEDYEKYLKIIENEEEKIKRVKMQQ 200 (374)
T ss_dssp CCSCHHHHHHHHHHHHHHCTTC---HHHHHSSCCCSSSHHHHHHHHHHHHHTCSSCSCCTTTHHHHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHhCHhH---HHHHHHHHccCCCHHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 4699999999999999999864 899999998 999999974332221 11 234554422110000
Q ss_pred ------CCCccccccccCCCCCCCccccCCCCCCCCCCCCCcccccCCCCCCHHHHHHHHHHHhhhCC---CChhhhhhh
Q 021756 93 ------NDSFTLEWVDSNQGYDGLKNFYGPGGKRGSSTRPSDQERKKGVPWTEEEHRQFLMGLKKFGK---GDWRNISRN 163 (308)
Q Consensus 93 ------~~~f~l~~~~~~~~~dg~~~~~~~ggkR~~~~~~~~~erkKg~pWTeEE~~llL~gl~kyG~---G~W~~Iar~ 163 (308)
...+..+|....-.|.+ . ..++..||+|||+.||.+|.+||- |.|..|-..
T Consensus 201 ~~L~~Ki~~y~~P~~~L~i~y~~-------~-------------~~k~k~yteeEDRfLL~~l~k~G~~~~g~we~Ir~~ 260 (374)
T 2y9y_A 201 EALRRKLSEYKNPFFDLKLKHPP-------S-------------SNNKRTYSEEEDRFILLMLFKYGLDRDDVYELVRDE 260 (374)
T ss_dssp HHHHHHHTTCSSHHHHCCCSSCC-------C-------------CSSCCCSCHHHHHHHHHHHHHHTTCSSCCHHHHHHH
T ss_pred HHHHHHHHHccCCHHHceeccCC-------C-------------CCCCCccCHHHHHHHHHHHHHhccCCCChHHHHHHH
Confidence 01122233321111110 0 012347999999999999999998 899999532
Q ss_pred -----------hcCCCCHHHHHHHHHHHHHHH
Q 021756 164 -----------FVTTRTPTQVASHAQKYFNRQ 184 (308)
Q Consensus 164 -----------~V~tRT~~Q~~shaqky~~r~ 184 (308)
|+.+||+.++..|+.-++.-.
T Consensus 261 Ir~~p~FrFDwF~kSRT~~EL~rRc~tLi~~I 292 (374)
T 2y9y_A 261 IRDCPLFELDFYFRSRTPVELARRGNTLLQCL 292 (374)
T ss_dssp HHHCSGGGSCHHHHTCCHHHHHHHHHHHHHHH
T ss_pred HHhCcchhhhHHHhcCCHHHHHHHHHHHHHHH
Confidence 389999999999997554433
No 71
>2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.68 E-value=3.8e-08 Score=72.63 Aligned_cols=47 Identities=28% Similarity=0.572 Sum_probs=42.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHh-hCCCCCHHHHHHHHHHh
Q 021756 24 SKGTKWTPQENKQFENALAVYDKDTPDRWIKVAA-MIPGKTVGDVIKQYKEL 74 (308)
Q Consensus 24 ~~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa-~vPGRT~~qc~~rY~~L 74 (308)
.....||+||.++|+.+|++|+.+ |..||. +||+||+.||++.|-.-
T Consensus 7 ~~~~~WT~eE~~~Fe~~l~~yGKd----f~~I~~~~v~~Kt~~~~v~fYY~w 54 (63)
T 2yqk_A 7 GIEKCWTEDEVKRFVKGLRQYGKN----FFRIRKELLPNKETGELITFYYYW 54 (63)
T ss_dssp CCCCSCCHHHHHHHHHHHHHTCSC----HHHHHHHSCTTSCHHHHHHHHHHH
T ss_pred cCCCCcCHHHHHHHHHHHHHhCcc----HHHHHHHHcCCCcHHHHHHHHhcc
Confidence 345689999999999999999996 999998 69999999999998643
No 72
>1irz_A ARR10-B; helix-turn-helix, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.11
Probab=98.65 E-value=6e-08 Score=72.18 Aligned_cols=55 Identities=33% Similarity=0.412 Sum_probs=46.0
Q ss_pred ccCCCCCCHHHHHHHHHHHhhhCCC--Chhhhhhhh--cCCCCHHHHHHHHHHHHHHHhc
Q 021756 131 RKKGVPWTEEEHRQFLMGLKKFGKG--DWRNISRNF--VTTRTPTQVASHAQKYFNRQLT 186 (308)
Q Consensus 131 rkKg~pWTeEE~~llL~gl~kyG~G--~W~~Iar~~--V~tRT~~Q~~shaqky~~r~~s 186 (308)
++.+..||+|.|+.|++||..+|.. .++.|-+ + |++.|..+|+||.|||+..+..
T Consensus 4 ~k~r~~WT~elH~~Fv~Av~~LG~~~AtPk~Il~-~M~v~gLT~~~VkSHLQKYR~~l~r 62 (64)
T 1irz_A 4 KKPRVLWTHELHNKFLAAVDHLGVERAVPKKILD-LMNVDKLTRENVASHLQKFRVALKK 62 (64)
T ss_dssp CCSSCSSCHHHHHHHHHHHHHHCTTTCCHHHHHH-HHCCTTCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCCcCCHHHHHHHHHHHHHhCCCCCCcHHHHH-HcCCCCCCHHHHHHHHHHHHHHHHc
Confidence 3456789999999999999999942 2788974 5 6789999999999999988753
No 73
>4b4c_A Chromodomain-helicase-DNA-binding protein 1; chromatin-remodeling, histone acetylation COMP chromatin regulation, transcription; 1.62A {Homo sapiens}
Probab=98.61 E-value=2.6e-07 Score=81.92 Aligned_cols=50 Identities=12% Similarity=0.127 Sum_probs=39.8
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhh--CCCCCHHHHHHHHHHhh
Q 021756 25 KGTKWTPQENKQFENALAVYDKDTPDRWIKVAAM--IPGKTVGDVIKQYKELE 75 (308)
Q Consensus 25 ~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~--vPGRT~~qc~~rY~~L~ 75 (308)
.-..||+.|...|.+|+.+||.. .+||+.|++. |.+||..+|.+.+..+.
T Consensus 6 ~~~~~t~~E~r~fira~~kfG~~-~~r~~~I~~da~L~~Ks~~~v~~y~~~f~ 57 (211)
T 4b4c_A 6 NIKGFSDAEIRRFIKSYKKFGGP-LERLDAIARDAELVDKSETDLRRLGELVH 57 (211)
T ss_dssp --CCSCHHHHHHHHHHHTTCSSG-GGCHHHHHHHTTCTTSCHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHCCc-hhHHHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 34679999999999999999942 3679999965 77999999987665543
No 74
>2aje_A Telomere repeat-binding protein; DNA-binding, Trp, MYB motif, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.3
Probab=98.59 E-value=7.2e-08 Score=78.27 Aligned_cols=51 Identities=18% Similarity=0.245 Sum_probs=45.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhC----CCCCHHHHHHHHHHhhh
Q 021756 23 ESKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMI----PGKTVGDVIKQYKELEE 76 (308)
Q Consensus 23 ~~~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~v----PGRT~~qc~~rY~~L~~ 76 (308)
....+.||.|||+.|..+|.+||.+ +|..|+..+ +|||..||++||..++.
T Consensus 10 rr~r~~WT~EEd~~L~~gV~k~G~g---~W~~I~~~~~~~f~~RT~v~lKdrWrnllk 64 (105)
T 2aje_A 10 RRIRRPFSVAEVEALVQAVEKLGTG---RWRDVKLCAFEDADHRTYVDLKDKWKTLVH 64 (105)
T ss_dssp CCCCCSCCHHHHHHHHHHHHHHCSS---SHHHHHSSSSSSTTCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCC---ChHHHHHHhccccCCCCHHHHHHHHHHHHh
Confidence 4567899999999999999999986 499999976 89999999999999875
No 75
>2crg_A Metastasis associated protein MTA3; transcription factor, helix turn helix, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.3
Probab=98.55 E-value=1.1e-07 Score=71.66 Aligned_cols=45 Identities=29% Similarity=0.533 Sum_probs=41.1
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCChhHHHHHh-hCCCCCHHHHHHHHHHh
Q 021756 26 GTKWTPQENKQFENALAVYDKDTPDRWIKVAA-MIPGKTVGDVIKQYKEL 74 (308)
Q Consensus 26 ~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa-~vPGRT~~qc~~rY~~L 74 (308)
...||+||.++|+.+|+.||.+ |..||. +||+||+.||++.|-.-
T Consensus 8 ~~~WT~eE~~~Fe~~l~~yGKd----f~~I~~~~v~~Kt~~~~v~fYY~w 53 (70)
T 2crg_A 8 MEEWSASEACLFEEALEKYGKD----FNDIRQDFLPWKSLTSIIEYYYMW 53 (70)
T ss_dssp SCCCCHHHHHHHHHHHHHTCSC----HHHHHHTTCSSSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCcc----HHHHHHHHcCCCCHHHHHHHHHhh
Confidence 4579999999999999999996 999999 69999999999998743
No 76
>4a69_C Nuclear receptor corepressor 2; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens} PDB: 1xc5_A
Probab=98.52 E-value=9.1e-08 Score=76.06 Aligned_cols=42 Identities=19% Similarity=0.306 Sum_probs=39.6
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHH
Q 021756 134 GVPWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHA 177 (308)
Q Consensus 134 g~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~sha 177 (308)
...||+||+++|++++..||+ +|..|+ .++++||..||..+|
T Consensus 43 ~~~WT~eE~~~F~~~~~~~gK-~F~~Ia-~~l~~Kt~~~cV~~Y 84 (94)
T 4a69_C 43 MNMWSEQEKETFREKFMQHPK-NFGLIA-SFLERKTVAECVLYY 84 (94)
T ss_dssp TCCCCHHHHHHHHHHHHHSTT-CHHHHH-HTCTTCCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCC-CHHHHH-HHcCCCCHHHHHHHH
Confidence 458999999999999999999 999999 699999999999986
No 77
>1x58_A Hypothetical protein 4930532D21RIK; MUS musculus adult MALE testis cDNA, riken FULL-length enriched library, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.1
Probab=98.48 E-value=2.5e-07 Score=68.35 Aligned_cols=48 Identities=15% Similarity=0.316 Sum_probs=43.4
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCCChhHHHHH---hhCCCCCHHHHHHHHHHhhh
Q 021756 25 KGTKWTPQENKQFENALAVYDKDTPDRWIKVA---AMIPGKTVGDVIKQYKELEE 76 (308)
Q Consensus 25 ~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IA---a~vPGRT~~qc~~rY~~L~~ 76 (308)
....||+||++.|.+.|.+||.. |..|+ .++++||..++.++|..|..
T Consensus 7 ~r~~WT~EE~~~L~~gV~k~G~~----W~~I~~~y~f~~~RT~VdLKdk~r~L~k 57 (62)
T 1x58_A 7 GRKDFTKEEVNYLFHGVKTMGNH----WNSILWSFPFQKGRRAVDLAHKYHRLIS 57 (62)
T ss_dssp CSSSCCHHHHHHHHHHHHHHCSC----HHHHHHHSCCCTTCCHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHhHh----HHHHHHhCCCccCcccchHHHHHHHHHh
Confidence 56789999999999999999973 99999 46789999999999999864
No 78
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=98.41 E-value=2.4e-07 Score=84.25 Aligned_cols=48 Identities=21% Similarity=0.380 Sum_probs=43.6
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhh
Q 021756 25 KGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEE 76 (308)
Q Consensus 25 ~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~ 76 (308)
....||.||+++|+.||+.|+.+ |..||..|+|||+.||+.+|.....
T Consensus 132 ~s~~WTeEE~~lFleAl~kYGKD----W~~IAk~VgTKT~~QcKnfY~~~kK 179 (235)
T 2iw5_B 132 CNARWTTEEQLLAVQAIRKYGRD----FQAISDVIGNKSVVQVKNFFVNYRR 179 (235)
T ss_dssp CCSSCCHHHHHHHHHHHHHHSSC----HHHHHHHHSSCCHHHHHHHHHHTTT
T ss_pred cCCCCCHHHHHHHHHHHHHHCcC----HHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999976 9999999999999999999986543
No 79
>4a69_C Nuclear receptor corepressor 2; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens} PDB: 1xc5_A
Probab=98.33 E-value=7.3e-07 Score=70.82 Aligned_cols=45 Identities=22% Similarity=0.364 Sum_probs=41.5
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHh
Q 021756 26 GTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKEL 74 (308)
Q Consensus 26 ~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L 74 (308)
...||+||.++|+.++..||++ |.+||++||+||+.||++.|-.-
T Consensus 43 ~~~WT~eE~~~F~~~~~~~gK~----F~~Ia~~l~~Kt~~~cV~~YY~~ 87 (94)
T 4a69_C 43 MNMWSEQEKETFREKFMQHPKN----FGLIASFLERKTVAECVLYYYLT 87 (94)
T ss_dssp TCCCCHHHHHHHHHHHHHSTTC----HHHHHHTCTTCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCC----HHHHHHHcCCCCHHHHHHHHhcc
Confidence 4679999999999999999986 99999999999999999998654
No 80
>1fex_A TRF2-interacting telomeric RAP1 protein; helix turn helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Synthetic} SCOP: a.4.1.3
Probab=97.86 E-value=1e-05 Score=59.03 Aligned_cols=47 Identities=15% Similarity=0.313 Sum_probs=41.7
Q ss_pred CCCCHHHHHHHHHHHhhh--------CCCChhhhhhhhcCCCCHHHHHHHHHHHH
Q 021756 135 VPWTEEEHRQFLMGLKKF--------GKGDWRNISRNFVTTRTPTQVASHAQKYF 181 (308)
Q Consensus 135 ~pWTeEE~~llL~gl~ky--------G~G~W~~Iar~~V~tRT~~Q~~shaqky~ 181 (308)
.++|+|||++|+.-|.+| |+.-|+.|++..++.+|-.+++.||.|++
T Consensus 3 ~~FT~edD~~L~~~v~~~~~~~~~~~Gn~iwk~la~~~~~~HtwqSwRdRy~k~l 57 (59)
T 1fex_A 3 IAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKSSLTQHSWQSLKDRYLKHL 57 (59)
T ss_dssp CCCCHHHHHHHHHHHHHTCCSTTTTTSSHHHHHHHHSCSSSCCSHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHhccccCCCccHHHHHHHHHhHCCCCCHHHHHHHHHHHc
Confidence 589999999999999999 55579999964799999999999988764
No 81
>3hm5_A DNA methyltransferase 1-associated protein 1; DNA methylation, chromatin, structural genomics consortium, SGC, activator, chromatin regulator; HET: DNA; 1.80A {Homo sapiens}
Probab=97.80 E-value=3.9e-05 Score=60.91 Aligned_cols=50 Identities=12% Similarity=0.189 Sum_probs=44.7
Q ss_pred CCCCHHHHHHHHHHHhhhCCCChhhhhhhhc-----CCCCHHHHHHHHHHHHHHHhc
Q 021756 135 VPWTEEEHRQFLMGLKKFGKGDWRNISRNFV-----TTRTPTQVASHAQKYFNRQLT 186 (308)
Q Consensus 135 ~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V-----~tRT~~Q~~shaqky~~r~~s 186 (308)
.+||.||...|++.+++||. +|..|+ ..+ ++||..++++||-...+++..
T Consensus 31 ~~WTkEETd~Lf~L~~~fdl-RW~vI~-DRy~~~~~~~Rt~EdLK~RyY~v~~~l~~ 85 (93)
T 3hm5_A 31 DAWTKAETDHLFDLSRRFDL-RFVVIH-DRYDHQQFKKRSVEDLKERYYHICAKLAN 85 (93)
T ss_dssp TTBCHHHHHHHHHHHHHTTT-CHHHHH-HHSCTTTSCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCC-Ceeeeh-hhhccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 48999999999999999999 999999 466 689999999999887777754
No 82
>2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B*
Probab=97.70 E-value=3.3e-05 Score=77.09 Aligned_cols=47 Identities=21% Similarity=0.386 Sum_probs=43.0
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhh
Q 021756 25 KGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELE 75 (308)
Q Consensus 25 ~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~ 75 (308)
....||.||..+|+.+|.+||.+ |..||..|++||+.||+.+|....
T Consensus 379 ~~~~WT~eE~~~f~~al~~yGkd----w~~IA~~VgTKT~~Qvk~fy~~~k 425 (482)
T 2xag_B 379 CNARWTTEEQLLAVQAIRKYGRD----FQAISDVIGNKSVVQVKNFFVNYR 425 (482)
T ss_dssp CCSCCCHHHHHHHHHHHHHHTTC----HHHHHHHHSSCCHHHHHHHHHHTT
T ss_pred cCCCCCHHHHHHHHHHHHHHCcC----HHHHHHHhCCCCHHHHHHHHHHHH
Confidence 45789999999999999999986 999999999999999999997643
No 83
>3hm5_A DNA methyltransferase 1-associated protein 1; DNA methylation, chromatin, structural genomics consortium, SGC, activator, chromatin regulator; HET: DNA; 1.80A {Homo sapiens}
Probab=97.64 E-value=9.7e-05 Score=58.62 Aligned_cols=48 Identities=17% Similarity=0.370 Sum_probs=43.3
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhC-----CCCCHHHHHHHHHHhhhhh
Q 021756 27 TKWTPQENKQFENALAVYDKDTPDRWIKVAAMI-----PGKTVGDVIKQYKELEEDV 78 (308)
Q Consensus 27 ~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~v-----PGRT~~qc~~rY~~L~~Dv 78 (308)
..||+||+..|..++..|+. ||..|+..+ ++||+.++++||..+...+
T Consensus 31 ~~WTkEETd~Lf~L~~~fdl----RW~vI~DRy~~~~~~~Rt~EdLK~RyY~v~~~l 83 (93)
T 3hm5_A 31 DAWTKAETDHLFDLSRRFDL----RFVVIHDRYDHQQFKKRSVEDLKERYYHICAKL 83 (93)
T ss_dssp TTBCHHHHHHHHHHHHHTTT----CHHHHHHHSCTTTSCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCC----CeeeehhhhccCCCCCCCHHHHHHHHHHHHHHH
Confidence 78999999999999999997 499999999 5899999999998876543
No 84
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=97.56 E-value=0.00011 Score=57.91 Aligned_cols=49 Identities=16% Similarity=0.313 Sum_probs=43.1
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhh
Q 021756 27 TKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEE 76 (308)
Q Consensus 27 ~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~ 76 (308)
-.||+|||+.+..+...-+. +++.|..||..|.+|+..||.+||++|..
T Consensus 34 vlWTRe~DR~IL~~cQ~~G~-s~~tFa~iA~~L~Nks~nqV~~RFq~Lm~ 82 (95)
T 1ug2_A 34 VLWTREADRVILTMCQEQGA-QPHTFSVISQQLGNKTPVEVSHRFRELMQ 82 (95)
T ss_dssp SSSCHHHHHHHHHHHHHTTS-CTTTHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred EEeccccCHHHHHHHHhcCC-ChhHHHHHHHHHccCCHHHHHHHHHHHHH
Confidence 46999999999999888765 35679999999999999999999999864
No 85
>1fex_A TRF2-interacting telomeric RAP1 protein; helix turn helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Synthetic} SCOP: a.4.1.3
Probab=97.50 E-value=0.00022 Score=51.82 Aligned_cols=50 Identities=6% Similarity=0.106 Sum_probs=42.7
Q ss_pred CCCCCHHHHHHHHHHHHHcCCC-----CChhHHHHHh-hCCCCCHHHHHHHHHHhh
Q 021756 26 GTKWTPQENKQFENALAVYDKD-----TPDRWIKVAA-MIPGKTVGDVIKQYKELE 75 (308)
Q Consensus 26 ~~~WT~EEdk~Le~Ala~y~~~-----t~dRW~~IAa-~vPGRT~~qc~~rY~~L~ 75 (308)
...+|.|||+.|.+.|+.|... ...-|..+|+ .+|++|-..|++||.+-+
T Consensus 2 R~~FT~edD~~L~~~v~~~~~~~~~~~Gn~iwk~la~~~~~~HtwqSwRdRy~k~l 57 (59)
T 1fex_A 2 RIAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKSSLTQHSWQSLKDRYLKHL 57 (59)
T ss_dssp CCCCCHHHHHHHHHHHHHTCCSTTTTTSSHHHHHHHHSCSSSCCSHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHhccccCCCccHHHHHHHHHhHCCCCCHHHHHHHHHHHc
Confidence 4679999999999999998432 3456999999 899999999999998754
No 86
>2xb0_X Chromo domain-containing protein 1; hydrolase, DNA-binding protein, transcription, chromatin REG; HET: GOL; 2.00A {Saccharomyces cerevisiae} PDB: 3ted_A
Probab=97.47 E-value=0.00064 Score=63.31 Aligned_cols=50 Identities=14% Similarity=0.108 Sum_probs=41.0
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhh--CCCCCHHHHHHHHHHhh
Q 021756 25 KGTKWTPQENKQFENALAVYDKDTPDRWIKVAAM--IPGKTVGDVIKQYKELE 75 (308)
Q Consensus 25 ~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~--vPGRT~~qc~~rY~~L~ 75 (308)
+.+.||..|...|.+++-+||.- .+||+.|++. |+.|+..++.+-|.+|.
T Consensus 2 p~~~ltekEiR~l~Ra~~kfG~~-~~R~e~I~~dA~L~~ks~~~i~~~~~~li 53 (270)
T 2xb0_X 2 PLGSIGESEVRALYKAILKFGNL-KEILDELIADGTLPVKSFEKYGETYDEMM 53 (270)
T ss_dssp TTCCCCHHHHHHHHHHHHHHSSC-TTCHHHHHHTTSSCCCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCH-HHHHHHHHHhcccccCCHHHHHHHHHHHH
Confidence 45789999999999999999964 3589999754 56899999888877664
No 87
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=97.42 E-value=0.00033 Score=55.33 Aligned_cols=52 Identities=25% Similarity=0.333 Sum_probs=45.4
Q ss_pred CCCCCCHHHHHHHHHHHhhhCC--CChhhhhhhhcCCCCHHHHHHHHHHHHHHHh
Q 021756 133 KGVPWTEEEHRQFLMGLKKFGK--GDWRNISRNFVTTRTPTQVASHAQKYFNRQL 185 (308)
Q Consensus 133 Kg~pWTeEE~~llL~gl~kyG~--G~W~~Iar~~V~tRT~~Q~~shaqky~~r~~ 185 (308)
+.+-||.|||+.+|...++-|. ..|..|| ..+.+||+.||++|+|.+++-..
T Consensus 32 ~VvlWTRe~DR~IL~~cQ~~G~s~~tFa~iA-~~L~Nks~nqV~~RFq~Lm~Lf~ 85 (95)
T 1ug2_A 32 KVVLWTREADRVILTMCQEQGAQPHTFSVIS-QQLGNKTPVEVSHRFRELMQLFH 85 (95)
T ss_dssp CCSSSCHHHHHHHHHHHHHTTSCTTTHHHHH-HHHSSCCHHHHHHHHHHHHHHHH
T ss_pred EEEEeccccCHHHHHHHHhcCCChhHHHHHH-HHHccCCHHHHHHHHHHHHHHHH
Confidence 4578999999999999999985 3799999 58899999999999998766654
No 88
>2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens}
Probab=96.38 E-value=3.9e-05 Score=57.55 Aligned_cols=48 Identities=15% Similarity=0.268 Sum_probs=41.1
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhh
Q 021756 27 TKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEE 76 (308)
Q Consensus 27 ~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~ 76 (308)
-.||+|||+.+..++..-|.. ++.|..||..| +||+.||.+||.+|+.
T Consensus 15 vlWTReeDR~IL~~cq~~G~s-~~tfa~iA~~L-nks~~QV~~RF~~Lm~ 62 (70)
T 2lr8_A 15 ILWTRNDDRVILLECQKRGPS-SKTFAYLAAKL-DKNPNQVSERFQQLMK 62 (70)
Confidence 469999999998888776652 46799999999 8999999999999864
No 89
>2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens}
Probab=96.21 E-value=6.8e-05 Score=56.21 Aligned_cols=49 Identities=20% Similarity=0.373 Sum_probs=41.9
Q ss_pred CCCCCHHHHHHHHHHHhhhCC--CChhhhhhhhcCCCCHHHHHHHHHHHHHHH
Q 021756 134 GVPWTEEEHRQFLMGLKKFGK--GDWRNISRNFVTTRTPTQVASHAQKYFNRQ 184 (308)
Q Consensus 134 g~pWTeEE~~llL~gl~kyG~--G~W~~Iar~~V~tRT~~Q~~shaqky~~r~ 184 (308)
.+-||.|||+.+|...++-|. ..|..||. -+ +||+.||.+|++.++.-.
T Consensus 14 vvlWTReeDR~IL~~cq~~G~s~~tfa~iA~-~L-nks~~QV~~RF~~Lm~Lf 64 (70)
T 2lr8_A 14 IILWTRNDDRVILLECQKRGPSSKTFAYLAA-KL-DKNPNQVSERFQQLMKLF 64 (70)
Confidence 357999999999999999886 37999995 55 999999999998876554
No 90
>4iej_A DNA methyltransferase 1-associated protein 1; DNA methylation, chromatin regulator, repressor, structural joint center for structural genomics; HET: DNA; 1.45A {Homo sapiens} PDB: 3hm5_A*
Probab=96.67 E-value=0.0039 Score=49.37 Aligned_cols=48 Identities=17% Similarity=0.369 Sum_probs=42.7
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCC-----CCCHHHHHHHHHHhhhhh
Q 021756 27 TKWTPQENKQFENALAVYDKDTPDRWIKVAAMIP-----GKTVGDVIKQYKELEEDV 78 (308)
Q Consensus 27 ~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vP-----GRT~~qc~~rY~~L~~Dv 78 (308)
..||.||...|-.++..|+. ||..|+.... .||++|+++||-.+...+
T Consensus 31 ~~WT~eETd~LfdLc~~fdl----Rw~vI~DRy~~~~~~~RtvEdLK~RYY~V~~~l 83 (93)
T 4iej_A 31 DAWTKAETDHLFDLSRRFDL----RFVVIHDRYDHQQFKKRSVEDLKERYYHICAKL 83 (93)
T ss_dssp TTBCHHHHHHHHHHHHHTTT----CHHHHHHHCCTTTSCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCC----CeEEEeeccccCCCCCCCHHHHHHHHHHHHHHH
Confidence 57999999999999999997 4999999985 699999999998876544
No 91
>1ofc_X ISWI protein; nuclear protein, chromatin remodeling factor, ATPase, SANT domain, nucleosome recognition; HET: GLC G4D; 1.9A {Drosophila melanogaster} SCOP: a.4.1.3 a.4.1.13 a.187.1.1 PDB: 2nog_A
Probab=96.63 E-value=0.0027 Score=60.09 Aligned_cols=48 Identities=29% Similarity=0.582 Sum_probs=43.3
Q ss_pred CCCHHHHHHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHHHHHHHH
Q 021756 136 PWTEEEHRQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNRQ 184 (308)
Q Consensus 136 pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaqky~~r~ 184 (308)
.||..+-..|+.|+.+||+.+|..|| ..|+++|+.+|+.+++-++.|.
T Consensus 112 ~W~rrdf~~Fi~a~~kyGr~~~~~IA-~ev~~Kt~eEV~~Y~~vFw~ry 159 (304)
T 1ofc_X 112 AWTKRDFNQFIKANEKYGRDDIDNIA-KDVEGKTPEEVIEYNAVFWERC 159 (304)
T ss_dssp TCCHHHHHHHHHHHHHHCTTCHHHHT-TSSTTCCHHHHHHHHHHHHHHG
T ss_pred ccCHHHHHHHHHHHHHhCHHHHHHHH-HHhcCCCHHHHHHHHHHHHHhH
Confidence 59999999999999999999999999 5899999999999877665554
No 92
>2ebi_A DNA binding protein GT-1; DNA-binding domain, phosphorylation; HET: DNA; NMR {Arabidopsis thaliana} PDB: 2jmw_A*
Probab=96.32 E-value=0.0058 Score=46.80 Aligned_cols=54 Identities=11% Similarity=0.326 Sum_probs=43.0
Q ss_pred CCCCCCHHHHHHHHHHHHHcC------CCCChhHHHHHhhCC----CCCHHHHHHHHHHhhhhh
Q 021756 25 KGTKWTPQENKQFENALAVYD------KDTPDRWIKVAAMIP----GKTVGDVIKQYKELEEDV 78 (308)
Q Consensus 25 ~~~~WT~EEdk~Le~Ala~y~------~~t~dRW~~IAa~vP----GRT~~qc~~rY~~L~~Dv 78 (308)
+...||.+|..+|..+..... ......|+.||+.|- .||+.||..+|..|...-
T Consensus 3 R~~~Wt~~Et~~Li~~~~e~~~~f~~~~~~~~~W~~Ia~~m~~~G~~rs~~qC~~K~~nL~k~Y 66 (86)
T 2ebi_A 3 RAETWVQDETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDRSPDMCTDKWRNLLKEF 66 (86)
T ss_dssp CSCCCCHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHccccchHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence 457899999999999886422 123457999999975 599999999999998653
No 93
>2ebi_A DNA binding protein GT-1; DNA-binding domain, phosphorylation; HET: DNA; NMR {Arabidopsis thaliana} PDB: 2jmw_A*
Probab=96.16 E-value=0.0059 Score=46.75 Aligned_cols=53 Identities=17% Similarity=0.359 Sum_probs=40.1
Q ss_pred CCCCCHHHHHHHHHHHhhh----CC-----CChhhhhhhhc---CCCCHHHHHHHHHHHHHHHhc
Q 021756 134 GVPWTEEEHRQFLMGLKKF----GK-----GDWRNISRNFV---TTRTPTQVASHAQKYFNRQLT 186 (308)
Q Consensus 134 g~pWTeEE~~llL~gl~ky----G~-----G~W~~Iar~~V---~tRT~~Q~~shaqky~~r~~s 186 (308)
+..||.+|-.+||.+...+ .. ..|..||..+- -.||+.||+..|.....+...
T Consensus 4 ~~~Wt~~Et~~Li~~~~e~~~~f~~~~~~~~~W~~Ia~~m~~~G~~rs~~qC~~K~~nL~k~Yk~ 68 (86)
T 2ebi_A 4 AETWVQDETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDRSPDMCTDKWRNLLKEFKK 68 (86)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCS
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHccccchHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 3579999999999998753 11 16999995321 279999999999887666543
No 94
>4iej_A DNA methyltransferase 1-associated protein 1; DNA methylation, chromatin regulator, repressor, structural joint center for structural genomics; HET: DNA; 1.45A {Homo sapiens} PDB: 3hm5_A*
Probab=95.84 E-value=0.019 Score=45.39 Aligned_cols=51 Identities=12% Similarity=0.214 Sum_probs=43.9
Q ss_pred CCCCHHHHHHHHHHHhhhCCCChhhhhhhhc----CCCCHHHHHHHHHHHHHHHhc
Q 021756 135 VPWTEEEHRQFLMGLKKFGKGDWRNISRNFV----TTRTPTQVASHAQKYFNRQLT 186 (308)
Q Consensus 135 ~pWTeEE~~llL~gl~kyG~G~W~~Iar~~V----~tRT~~Q~~shaqky~~r~~s 186 (308)
..||.||-..|+..+++|+- +|--|+--+- +.||..+++.||-...+++..
T Consensus 31 ~~WT~eETd~LfdLc~~fdl-Rw~vI~DRy~~~~~~~RtvEdLK~RYY~V~~~l~~ 85 (93)
T 4iej_A 31 DAWTKAETDHLFDLSRRFDL-RFVVIHDRYDHQQFKKRSVEDLKERYYHICAKLAN 85 (93)
T ss_dssp TTBCHHHHHHHHHHHHHTTT-CHHHHHHHCCTTTSCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCC-CeEEEeeccccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 36999999999999999998 9999994332 479999999999888888764
No 95
>4b4c_A Chromodomain-helicase-DNA-binding protein 1; chromatin-remodeling, histone acetylation COMP chromatin regulation, transcription; 1.62A {Homo sapiens}
Probab=95.81 E-value=0.012 Score=51.66 Aligned_cols=50 Identities=22% Similarity=0.347 Sum_probs=42.1
Q ss_pred CCCCHHHHHHHHHHHhhhC--CCChhhhhhh-hcCCCCHHHHHHHHHHHHHHH
Q 021756 135 VPWTEEEHRQFLMGLKKFG--KGDWRNISRN-FVTTRTPTQVASHAQKYFNRQ 184 (308)
Q Consensus 135 ~pWTeEE~~llL~gl~kyG--~G~W~~Iar~-~V~tRT~~Q~~shaqky~~r~ 184 (308)
..||+.|-+.|+.++.+|| .++|..|+++ -+.+||...|+..+..+..+.
T Consensus 8 ~~~t~~E~r~fira~~kfG~~~~r~~~I~~da~L~~Ks~~~v~~y~~~f~~~c 60 (211)
T 4b4c_A 8 KGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSETDLRRLGELVHNGC 60 (211)
T ss_dssp CCSCHHHHHHHHHHHTTCSSGGGCHHHHHHHTTCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCchhHHHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence 4799999999999999999 6799999853 277999999998877665543
No 96
>1irz_A ARR10-B; helix-turn-helix, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.11
Probab=93.63 E-value=0.18 Score=37.14 Aligned_cols=49 Identities=14% Similarity=0.194 Sum_probs=38.7
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhC--CCCCHHHHHHHHHHh
Q 021756 25 KGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMI--PGKTVGDVIKQYKEL 74 (308)
Q Consensus 25 ~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~v--PGRT~~qc~~rY~~L 74 (308)
..-.||.|.-+.|..||..+|.+. --+..|.+.| +|.|..+|..|.++.
T Consensus 6 ~r~~WT~elH~~Fv~Av~~LG~~~-AtPk~Il~~M~v~gLT~~~VkSHLQKY 56 (64)
T 1irz_A 6 PRVLWTHELHNKFLAAVDHLGVER-AVPKKILDLMNVDKLTRENVASHLQKF 56 (64)
T ss_dssp SSCSSCHHHHHHHHHHHHHHCTTT-CCHHHHHHHHCCTTCCHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHHhCCCC-CCcHHHHHHcCCCCCCHHHHHHHHHHH
Confidence 446799999999999999998442 2377887775 589999998876654
No 97
>2y9y_A Imitation switch protein 1 (DEL_ATPase); transcription, nuclear protein complex, chromatin remodeling nucleosome remodeling; 3.25A {Saccharomyces cerevisiae} PDB: 2y9z_A
Probab=90.16 E-value=0.4 Score=46.42 Aligned_cols=48 Identities=23% Similarity=0.469 Sum_probs=42.0
Q ss_pred CCCHHHHHHHHHHHhhhCCCChhhhhhhhcC-CCCHHHHHHHHHHHHHHH
Q 021756 136 PWTEEEHRQFLMGLKKFGKGDWRNISRNFVT-TRTPTQVASHAQKYFNRQ 184 (308)
Q Consensus 136 pWTeEE~~llL~gl~kyG~G~W~~Iar~~V~-tRT~~Q~~shaqky~~r~ 184 (308)
.||.-+=..|+.|+.+||+.+-..||. .|. ++|+.+|+.+++-++.|.
T Consensus 125 ~WnrrDF~~FI~a~~kyGR~d~~~IA~-ev~~~Kt~eEV~~Y~~vFw~Ry 173 (374)
T 2y9y_A 125 NWNKLEFRKFITVSGKYGRNSIQAIAR-ELAPGKTLEEVRAYAKAFWSNI 173 (374)
T ss_dssp CSCHHHHHHHHHHHHHHCTTCHHHHHS-SCCCSSSHHHHHHHHHHHHHTC
T ss_pred ccCHHHHHHHHHHHHHhCHhHHHHHHH-HHccCCCHHHHHHHHHHHHHhh
Confidence 599999999999999999999999994 777 999999998876665543
No 98
>2xb0_X Chromo domain-containing protein 1; hydrolase, DNA-binding protein, transcription, chromatin REG; HET: GOL; 2.00A {Saccharomyces cerevisiae} PDB: 3ted_A
Probab=77.74 E-value=5.3 Score=36.91 Aligned_cols=44 Identities=16% Similarity=0.178 Sum_probs=35.6
Q ss_pred CCCCHHHHHHHHHHHhhhC--CCChhhhhhh-hcCCCCHHHHHHHHH
Q 021756 135 VPWTEEEHRQFLMGLKKFG--KGDWRNISRN-FVTTRTPTQVASHAQ 178 (308)
Q Consensus 135 ~pWTeEE~~llL~gl~kyG--~G~W~~Iar~-~V~tRT~~Q~~shaq 178 (308)
++||+-|-+.|+.++.+|| .++|..|+++ -++.|+...++.-++
T Consensus 4 ~~ltekEiR~l~Ra~~kfG~~~~R~e~I~~dA~L~~ks~~~i~~~~~ 50 (270)
T 2xb0_X 4 GSIGESEVRALYKAILKFGNLKEILDELIADGTLPVKSFEKYGETYD 50 (270)
T ss_dssp CCCCHHHHHHHHHHHHHHSSCTTCHHHHHHTTSSCCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCHHHHHHHHHHhcccccCCHHHHHHHHH
Confidence 4799999999999999999 4699999642 377888887665444
No 99
>2hzd_A Transcriptional enhancer factor TEF-1; DNA-binding, helix-turn-helix, gene regulation; NMR {Homo sapiens}
Probab=70.57 E-value=9.6 Score=29.24 Aligned_cols=46 Identities=30% Similarity=0.398 Sum_probs=33.6
Q ss_pred CCCCHHHHHHHHHHHhhhCC-CChhh--------------hhh----hhcCCCCHHHHHHHHHHH
Q 021756 135 VPWTEEEHRQFLMGLKKFGK-GDWRN--------------ISR----NFVTTRTPTQVASHAQKY 180 (308)
Q Consensus 135 ~pWTeEE~~llL~gl~kyG~-G~W~~--------------Iar----~~V~tRT~~Q~~shaqky 180 (308)
.-|+++=+..|++||..|.+ |+++- ||. ..-..||..||.+|-|-.
T Consensus 7 ~vW~~~lE~aF~eaL~~yp~~g~~k~~ls~~gk~~gRNelIs~yI~~~tGk~RtrKQVSShiQvl 71 (82)
T 2hzd_A 7 GVWSPDIEQSFQEALSIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVL 71 (82)
T ss_dssp CCSCHHHHHHHHHHHHHSCSSSCCCCCHHHHCCCCCTHHHHHHHHHHHHSCCCCSHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHcCCCCccceeecccccccchhHHHHHHHHHHHcccCCccchhHHHHHH
Confidence 46999999999999999964 33331 221 134689999999998853
No 100
>2lc3_A E3 ubiquitin-protein ligase hectd1; helical bundle, structural genomics, northeast structural GE consortium, NESG, structural genomics consortium; NMR {Homo sapiens}
Probab=48.15 E-value=8.2 Score=29.78 Aligned_cols=48 Identities=21% Similarity=0.239 Sum_probs=32.5
Q ss_pred cccCCCCCCHHHH-----------------------HHHHHHHhhhCCCChhhhhhhhcCCCCHHHHHHHHHHHHHH
Q 021756 130 ERKKGVPWTEEEH-----------------------RQFLMGLKKFGKGDWRNISRNFVTTRTPTQVASHAQKYFNR 183 (308)
Q Consensus 130 erkKg~pWTeEE~-----------------------~llL~gl~kyG~G~W~~Iar~~V~tRT~~Q~~shaqky~~r 183 (308)
|.-|++.||.|+- ..||.-.+..|. |. +...|+...|+..-|.++|.-
T Consensus 9 ~~~~~~~Ws~Eq~~~~L~Sd~lpKkdiIkfLq~na~~~FL~e~KLlGn-----iK-NVaKtanK~qLiaAY~~lfE~ 79 (88)
T 2lc3_A 9 ENGKMGCWSIEHVEQYLGTDELPKNDLITYLQKNADAAFLRHWKLTGT-----NK-SIRKNRNCSQLIAAYKDFCEH 79 (88)
T ss_dssp CSCCCCCCCHHHHHHHBTSSSBCHHHHHHHHHHHSCHHHHHHTTCSSC-----HH-HHHHHSCHHHHHHHHHHHHHH
T ss_pred ccCccCcchHHHHhcccccccccHHHHHHHHHHcchHHHHHHHHHhcc-----HH-HHHhcCcHHHHHHHHHHHHhc
Confidence 4456789999991 234444444555 55 456788999998888887764
No 101
>2dn0_A Zinc fingers and homeoboxes protein 3; triple homeobox 1 protein, KIAA0395, TIX1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.70 E-value=1.1e+02 Score=21.74 Aligned_cols=55 Identities=9% Similarity=0.008 Sum_probs=39.9
Q ss_pred CCceecCCCCCCCCHHHHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHH
Q 021756 17 SNWLFQESKGTKWTPQENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYK 72 (308)
Q Consensus 17 ~~~~~~~~~~~~WT~EEdk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~ 72 (308)
++.+.........|.+....|+.+.....--+...=..||..+ |-+..+|..=|.
T Consensus 3 s~~~~~~~~R~~ft~~Ql~~Le~~F~~~~yp~~~~r~~La~~~-~l~~~qV~~WFq 57 (76)
T 2dn0_A 3 SGSSGASIYKNKKSHEQLSALKGSFCRNQFPGQSEVEHLTKVT-GLSTREVRKWFS 57 (76)
T ss_dssp CSCSCCCCCCCCCCHHHHHHHHHHHHHSSSCCSHHHHHHHHHH-CCCHHHHHHHHH
T ss_pred CCCCCCCCCCccCCHHHHHHHHHHHhcCCCcCHHHHHHHHHHh-CCChHHhhHHhH
Confidence 3445555567889999999999998875544444557889888 788888854443
No 102
>2hzd_A Transcriptional enhancer factor TEF-1; DNA-binding, helix-turn-helix, gene regulation; NMR {Homo sapiens}
Probab=34.19 E-value=63 Score=24.62 Aligned_cols=51 Identities=24% Similarity=0.339 Sum_probs=35.4
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCC------------ChhHHHHHhhCC-----CCCHHHHHHHHHHhh
Q 021756 25 KGTKWTPQENKQFENALAVYDKDT------------PDRWIKVAAMIP-----GKTVGDVIKQYKELE 75 (308)
Q Consensus 25 ~~~~WT~EEdk~Le~Ala~y~~~t------------~dRW~~IAa~vP-----GRT~~qc~~rY~~L~ 75 (308)
....|+++=+..|..||+.|+... ..|=+-||.+|- -||.+||-.|-+-|.
T Consensus 5 ~e~vW~~~lE~aF~eaL~~yp~~g~~k~~ls~~gk~~gRNelIs~yI~~~tGk~RtrKQVSShiQvlk 72 (82)
T 2hzd_A 5 AEGVWSPDIEQSFQEALSIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLA 72 (82)
T ss_dssp GSCCSCHHHHHHHHHHHHHSCSSSCCCCCHHHHCCCCCTHHHHHHHHHHHHSCCCCSHHHHHHHHHHH
T ss_pred cCCcCCHHHHHHHHHHHHHcCCCCccceeecccccccchhHHHHHHHHHHHcccCCccchhHHHHHHH
Confidence 457899999999999999998542 233455555553 367778776655543
No 103
>3i4p_A Transcriptional regulator, ASNC family; PSI, structural genom protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens str}
Probab=29.63 E-value=69 Score=26.08 Aligned_cols=40 Identities=13% Similarity=0.149 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhh
Q 021756 33 ENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEE 76 (308)
Q Consensus 33 Edk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~ 76 (308)
-|.++..+|..-+.- -|..||+.+ |-|...|++|.++|.+
T Consensus 4 ~d~~il~~L~~~~~~---s~~~la~~l-g~s~~tv~~rl~~L~~ 43 (162)
T 3i4p_A 4 LDRKILRILQEDSTL---AVADLAKKV-GLSTTPCWRRIQKMEE 43 (162)
T ss_dssp HHHHHHHHHTTCSCS---CHHHHHHHH-TCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCC---CHHHHHHHH-CcCHHHHHHHHHHHHH
Confidence 456666666654443 399999999 8999999999999875
No 104
>2lm1_A Lysine-specific demethylase LID; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Drosophila melanogaster}
Probab=26.93 E-value=89 Score=24.00 Aligned_cols=29 Identities=7% Similarity=0.323 Sum_probs=20.0
Q ss_pred ChhhhhhhhcCCCC---HHHHHHHHHHHHHHH
Q 021756 156 DWRNISRNFVTTRT---PTQVASHAQKYFNRQ 184 (308)
Q Consensus 156 ~W~~Iar~~V~tRT---~~Q~~shaqky~~r~ 184 (308)
.|..|++.+-...+ ..+++.+|.+|+...
T Consensus 67 ~W~~va~~lg~~~~~~~~~~lk~~Y~k~L~~y 98 (107)
T 2lm1_A 67 KWAKVANRMQYPSSKSVGATLKAHYERILHPF 98 (107)
T ss_dssp THHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHhCCCCCCcHHHHHHHHHHHHhHHH
Confidence 79999974422233 457889998886654
No 105
>2li6_A SWI/SNF chromatin-remodeling complex subunit SWI1; ligand binding, DNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=26.75 E-value=61 Score=25.54 Aligned_cols=28 Identities=11% Similarity=0.135 Sum_probs=21.1
Q ss_pred ChhhhhhhhcCCCCHHHHHHHHHHHHHHH
Q 021756 156 DWRNISRNFVTTRTPTQVASHAQKYFNRQ 184 (308)
Q Consensus 156 ~W~~Iar~~V~tRT~~Q~~shaqky~~r~ 184 (308)
.|..|++ .+.--....++.+|.+|+...
T Consensus 72 ~W~~Va~-~lg~~~~~~Lr~~Y~k~L~~y 99 (116)
T 2li6_A 72 QWSMVAQ-RLQISDYQQLESIYFRILLPY 99 (116)
T ss_dssp CHHHHHH-HHTSCCTTHHHHHHHHHHSHH
T ss_pred cHHHHHH-HhCCChHHHHHHHHHHHHHHH
Confidence 8999996 444444889999999985443
No 106
>3cz6_A DNA-binding protein RAP1; helical bundle, activator, chromosomal protein, nucleus, phosphoprotein, repressor, telomere; HET: MES; 1.85A {Saccharomyces cerevisiae} PDB: 3owt_A
Probab=22.62 E-value=47 Score=28.59 Aligned_cols=17 Identities=12% Similarity=0.388 Sum_probs=14.3
Q ss_pred cCCCCCCCCHHHHHHHH
Q 021756 22 QESKGTKWTPQENKQFE 38 (308)
Q Consensus 22 ~~~~~~~WT~EEdk~Le 38 (308)
++...+.||.|+|+.|+
T Consensus 110 P~N~pGIWT~eDDe~L~ 126 (168)
T 3cz6_A 110 PPNVPGIWTHDDDESLK 126 (168)
T ss_dssp CTTCTTCCCHHHHHHHH
T ss_pred CCCCCCCCChhhHHHHH
Confidence 34577899999999997
No 107
>2eqy_A RBP2 like, jumonji, at rich interactive domain 1B; ARID domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=22.55 E-value=1.4e+02 Score=23.75 Aligned_cols=29 Identities=14% Similarity=0.335 Sum_probs=20.2
Q ss_pred ChhhhhhhhcCC-CC---HHHHHHHHHHHHHHHh
Q 021756 156 DWRNISRNFVTT-RT---PTQVASHAQKYFNRQL 185 (308)
Q Consensus 156 ~W~~Iar~~V~t-RT---~~Q~~shaqky~~r~~ 185 (308)
.|..|++.+ .- .+ ..+++.+|.+|+....
T Consensus 65 ~W~~V~~~l-g~~~~~~~~~~Lr~~Y~k~L~~yE 97 (122)
T 2eqy_A 65 KWTKIATKM-GFAPGKAVGSHIRGHYERILNPYN 97 (122)
T ss_dssp THHHHHHHT-TCCSSSHHHHHHHHHHHHTHHHHH
T ss_pred cHHHHHHHh-CCCCCCcHHHHHHHHHHHHhHHHH
Confidence 899999744 32 22 3578999999866653
No 108
>1c20_A DEAD ringer protein; DNA-binding domain, ARID, AT-rich interaction domain, DNA- binding protein; NMR {Drosophila melanogaster} SCOP: a.4.3.1 PDB: 1kqq_A
Probab=21.85 E-value=95 Score=24.79 Aligned_cols=30 Identities=13% Similarity=0.257 Sum_probs=20.9
Q ss_pred ChhhhhhhhcCCCC----HHHHHHHHHHHHHHHh
Q 021756 156 DWRNISRNFVTTRT----PTQVASHAQKYFNRQL 185 (308)
Q Consensus 156 ~W~~Iar~~V~tRT----~~Q~~shaqky~~r~~ 185 (308)
.|..|++.+-...+ ..+++.+|.+|+....
T Consensus 75 ~W~~Va~~lg~~~~~~sa~~~Lk~~Y~k~L~~yE 108 (128)
T 1c20_A 75 LWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYE 108 (128)
T ss_dssp THHHHHHHTCCCSSCCSHHHHHHHHHHHHTHHHH
T ss_pred cHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 89999975422222 5688999999866553
No 109
>2e1c_A Putative HTH-type transcriptional regulator PH151; DNA-binding, transcriptional regulatory protein, archaeal; HET: DNA; 2.10A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2 PDB: 1ri7_A* 2zny_A* 2znz_A*
Probab=21.74 E-value=1.4e+02 Score=24.54 Aligned_cols=40 Identities=15% Similarity=0.223 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHcCCCCChhHHHHHhhCCCCCHHHHHHHHHHhhh
Q 021756 33 ENKQFENALAVYDKDTPDRWIKVAAMIPGKTVGDVIKQYKELEE 76 (308)
Q Consensus 33 Edk~Le~Ala~y~~~t~dRW~~IAa~vPGRT~~qc~~rY~~L~~ 76 (308)
-|..+..+|...+.-+ +..||+.+ |-|..-|.+|.+.|++
T Consensus 28 ~d~~IL~~L~~~~~~s---~~eLA~~l-glS~~tv~~rl~~L~~ 67 (171)
T 2e1c_A 28 IDKKIIKILQNDGKAP---LREISKIT-GLAESTIHERIRKLRE 67 (171)
T ss_dssp HHHHHHHHHHHCTTCC---HHHHHHHH-TSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCC---HHHHHHHH-CcCHHHHHHHHHHHHH
Confidence 3455666777665443 99999999 7999999999998865
No 110
>2gu0_A Nonstructural protein 2; NSP2, HIT motif, bristol, viral protein; 2.80A {Human rotavirus C}
Probab=21.64 E-value=26 Score=32.44 Aligned_cols=32 Identities=28% Similarity=0.456 Sum_probs=24.7
Q ss_pred hCCCChhhhhhhhcCCCCHHHHHHHHHHHHHHHhcCCCCC
Q 021756 152 FGKGDWRNISRNFVTTRTPTQVASHAQKYFNRQLTGGKDK 191 (308)
Q Consensus 152 yG~G~W~~Iar~~V~tRT~~Q~~shaqky~~r~~s~~k~k 191 (308)
||+|.|+.+. + .||++||...|...++..|..
T Consensus 218 HGkgHyRvV~--y------s~v~nHAdRv~at~ks~~K~~ 249 (312)
T 2gu0_A 218 HGKRHWRLVL--H------SQLMSHAERLDRKIKSDKKHG 249 (312)
T ss_dssp SSSSEEEEEE--G------GGHHHHHHHHHHHHHCCC---
T ss_pred cCCccEEEEe--h------HHhhhhHHHHHHHHhhhhhcC
Confidence 5999998886 2 689999999999998865544
No 111
>2jrz_A Histone demethylase jarid1C; bright/ARID domain, helical, structural genomics, structural genomics consortium, SGC, oxidoreductase; NMR {Homo sapiens} PDB: 2yqe_A
Probab=20.43 E-value=95 Score=24.48 Aligned_cols=29 Identities=10% Similarity=0.242 Sum_probs=19.2
Q ss_pred ChhhhhhhhcCCCC---HHHHHHHHHHHHHHH
Q 021756 156 DWRNISRNFVTTRT---PTQVASHAQKYFNRQ 184 (308)
Q Consensus 156 ~W~~Iar~~V~tRT---~~Q~~shaqky~~r~ 184 (308)
.|..|++.+=...+ ..+++.+|.+|+...
T Consensus 63 ~W~~Va~~lg~~~~~~a~~~Lk~~Y~k~L~~y 94 (117)
T 2jrz_A 63 RWARVAQRLNYPPGKNIGSLLRSHYERIVYPY 94 (117)
T ss_dssp THHHHHHHTTCCTTCTHHHHHHHHHHHTTHHH
T ss_pred cHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 89999974422222 457899998885443
Done!