Query 021757
Match_columns 308
No_of_seqs 191 out of 779
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 08:51:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021757.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021757hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1dh3_A Transcription factor CR 99.5 9.8E-15 3.3E-19 106.8 6.5 53 234-286 1-53 (55)
2 2wt7_A Proto-oncogene protein 99.3 1.2E-11 4E-16 92.3 9.1 57 233-289 1-57 (63)
3 1t2k_D Cyclic-AMP-dependent tr 99.2 3.4E-11 1.2E-15 89.0 8.9 53 234-286 1-53 (61)
4 2dgc_A Protein (GCN4); basic d 99.2 3.6E-11 1.2E-15 90.1 6.8 47 240-286 15-61 (63)
5 1jnm_A Proto-oncogene C-JUN; B 99.1 1.1E-10 3.7E-15 86.7 7.5 52 234-285 1-52 (62)
6 1gd2_E Transcription factor PA 99.0 1E-09 3.4E-14 84.0 8.4 61 236-296 10-70 (70)
7 1ci6_A Transcription factor AT 98.9 3.3E-09 1.1E-13 79.2 7.4 59 234-299 2-60 (63)
8 1gu4_A CAAT/enhancer binding p 98.5 5.6E-07 1.9E-11 70.1 9.5 56 233-288 14-69 (78)
9 1hjb_A Ccaat/enhancer binding 98.5 6.9E-07 2.4E-11 70.9 9.9 56 232-287 13-68 (87)
10 3a5t_A Transcription factor MA 98.4 1.1E-08 3.8E-13 84.0 -2.7 48 231-278 34-81 (107)
11 2wt7_B Transcription factor MA 98.2 9.7E-06 3.3E-10 64.7 9.9 55 231-285 24-78 (90)
12 2oqq_A Transcription factor HY 97.5 0.00029 1E-08 48.8 6.1 40 254-300 2-41 (42)
13 1deb_A APC protein, adenomatou 95.6 0.065 2.2E-06 38.6 7.8 50 257-306 5-54 (54)
14 1skn_P DNA-binding domain of S 95.5 0.0066 2.2E-07 48.5 2.6 32 231-262 59-90 (92)
15 2jee_A YIIU; FTSZ, septum, coi 95.3 0.095 3.2E-06 41.0 8.4 50 257-306 22-71 (81)
16 2w6a_A ARF GTPase-activating p 95.1 0.095 3.3E-06 38.9 7.4 41 257-297 22-62 (63)
17 3hnw_A Uncharacterized protein 94.8 0.13 4.5E-06 43.4 8.8 52 255-306 75-126 (138)
18 2jee_A YIIU; FTSZ, septum, coi 93.8 0.33 1.1E-05 38.0 8.4 49 255-303 6-54 (81)
19 3s9g_A Protein hexim1; cyclin 93.0 0.54 1.8E-05 38.1 8.6 47 258-304 40-93 (104)
20 1go4_E MAD1 (mitotic arrest de 92.6 0.71 2.4E-05 37.3 8.9 52 256-307 13-92 (100)
21 3hnw_A Uncharacterized protein 92.4 0.95 3.3E-05 38.1 9.9 52 255-306 82-133 (138)
22 3oja_B Anopheles plasmodium-re 91.1 2.2 7.4E-05 41.8 12.3 52 256-307 531-582 (597)
23 2eqb_B RAB guanine nucleotide 90.5 1.7 5.7E-05 35.0 8.9 19 282-300 75-93 (97)
24 3m48_A General control protein 90.2 0.33 1.1E-05 32.0 3.7 27 257-283 2-28 (33)
25 3he5_A Synzip1; heterodimeric 89.8 1.4 4.8E-05 30.6 6.8 44 256-306 4-47 (49)
26 3cve_A Homer protein homolog 1 89.6 1.8 6.2E-05 33.0 8.1 45 259-303 4-48 (72)
27 2oxj_A Hybrid alpha/beta pepti 89.6 0.46 1.6E-05 31.4 4.1 27 256-282 2-28 (34)
28 3a7p_A Autophagy protein 16; c 89.5 6.8 0.00023 33.8 12.5 66 235-300 69-134 (152)
29 1kd8_B GABH BLL, GCN4 acid bas 89.5 0.64 2.2E-05 31.1 4.7 30 256-285 2-31 (36)
30 2c9l_Y EB1, zebra, BZLF1 trans 89.3 2.1 7.1E-05 31.4 7.8 38 239-276 6-43 (63)
31 4etp_A Kinesin-like protein KA 89.2 0.93 3.2E-05 44.0 7.8 55 253-307 8-62 (403)
32 2dfs_A Myosin-5A; myosin-V, in 89.0 3.1 0.00011 45.2 12.4 26 280-305 1020-1045(1080)
33 1p9i_A Cortexillin I/GCN4 hybr 88.8 0.51 1.7E-05 30.1 3.7 26 282-307 5-30 (31)
34 3cvf_A Homer-3, homer protein 88.4 1.1 3.8E-05 34.7 6.3 44 259-302 10-53 (79)
35 3efg_A Protein SLYX homolog; x 88.3 1.2 4.3E-05 34.1 6.5 50 255-304 14-63 (78)
36 1gd2_E Transcription factor PA 88.3 0.73 2.5E-05 34.9 5.0 33 274-306 34-66 (70)
37 3u1c_A Tropomyosin alpha-1 cha 87.5 8 0.00028 30.6 11.0 54 253-306 42-95 (101)
38 3vmx_A Voltage-gated hydrogen 87.5 2.6 8.8E-05 29.9 7.1 39 261-299 3-41 (48)
39 3mq7_A Bone marrow stromal ant 87.1 3.3 0.00011 34.4 8.6 36 264-299 73-108 (121)
40 3c3f_A Alpha/beta peptide with 86.9 0.88 3E-05 30.1 4.1 28 256-283 2-29 (34)
41 1t2k_D Cyclic-AMP-dependent tr 86.8 4.4 0.00015 29.1 8.4 34 264-297 24-57 (61)
42 1kd8_A GABH AIV, GCN4 acid bas 86.8 0.83 2.9E-05 30.6 4.0 30 256-285 2-31 (36)
43 2v66_B Nuclear distribution pr 86.7 11 0.00038 30.8 11.6 51 257-307 37-87 (111)
44 3u06_A Protein claret segregat 86.5 1.3 4.6E-05 43.1 7.1 53 255-307 10-62 (412)
45 2v71_A Nuclear distribution pr 86.5 9.6 0.00033 33.8 11.9 51 257-307 90-140 (189)
46 3a7o_A Autophagy protein 16; c 86.5 2.9 9.8E-05 32.0 7.3 50 255-304 25-74 (75)
47 3o0z_A RHO-associated protein 86.4 7.1 0.00024 34.1 10.9 63 234-303 69-131 (168)
48 3efg_A Protein SLYX homolog; x 86.4 3.2 0.00011 31.7 7.8 50 258-307 10-59 (78)
49 3a2a_A Voltage-gated hydrogen 86.3 2 6.8E-05 31.4 6.1 39 261-299 10-48 (58)
50 3swy_A Cyclic nucleotide-gated 86.3 4 0.00014 28.6 7.5 45 259-306 2-46 (46)
51 2dgc_A Protein (GCN4); basic d 85.6 1.2 4.2E-05 32.7 4.9 31 276-306 30-60 (63)
52 3c3g_A Alpha/beta peptide with 85.4 1.2 4E-05 29.4 4.1 27 257-283 2-28 (33)
53 1uo4_A General control protein 85.2 1.1 3.7E-05 29.7 3.9 28 256-283 2-29 (34)
54 3bas_A Myosin heavy chain, str 85.2 11 0.00039 29.0 12.6 52 255-306 35-86 (89)
55 2hy6_A General control protein 84.9 1.2 4E-05 29.6 3.9 28 256-283 2-29 (34)
56 3m91_A Proteasome-associated A 84.8 4.3 0.00015 29.0 7.2 39 257-302 11-49 (51)
57 2w83_C C-JUN-amino-terminal ki 84.8 5.5 0.00019 30.8 8.2 46 259-304 6-58 (77)
58 2xdj_A Uncharacterized protein 84.6 3.8 0.00013 31.8 7.4 45 256-300 21-65 (83)
59 2bni_A General control protein 84.5 1.2 4.2E-05 29.5 3.9 28 256-283 2-29 (34)
60 2yy0_A C-MYC-binding protein; 84.5 1.7 5.7E-05 31.1 5.0 32 262-300 19-50 (53)
61 3swf_A CGMP-gated cation chann 84.2 2.7 9.3E-05 32.3 6.3 47 258-307 3-49 (74)
62 1dh3_A Transcription factor CR 84.0 1.7 5.7E-05 31.2 4.8 32 276-307 22-53 (55)
63 3s4r_A Vimentin; alpha-helix, 83.6 6.6 0.00022 30.8 8.6 27 277-303 57-83 (93)
64 1nkp_B MAX protein, MYC proto- 83.5 1.4 4.8E-05 33.4 4.6 22 255-276 47-68 (83)
65 2kz5_A Transcription factor NF 83.5 0.094 3.2E-06 41.8 -2.1 24 232-255 64-87 (91)
66 3u59_A Tropomyosin beta chain; 83.4 15 0.0005 28.9 11.0 9 298-306 87-95 (101)
67 2wq1_A General control protein 83.1 1.7 5.8E-05 28.6 4.1 27 257-283 2-28 (33)
68 3m9b_A Proteasome-associated A 83.1 1.4 4.8E-05 40.8 5.1 43 254-296 53-95 (251)
69 3mq7_A Bone marrow stromal ant 83.0 6.1 0.00021 32.8 8.4 49 258-306 60-108 (121)
70 2ve7_C Kinetochore protein NUF 82.9 1.1 3.7E-05 41.1 4.3 75 232-306 118-199 (250)
71 2oxj_A Hybrid alpha/beta pepti 82.6 2 7E-05 28.4 4.3 30 278-307 3-32 (34)
72 2v71_A Nuclear distribution pr 82.0 6.3 0.00021 35.0 8.8 34 264-297 90-123 (189)
73 3s9g_A Protein hexim1; cyclin 81.9 6.7 0.00023 31.7 8.1 31 254-284 64-94 (104)
74 3m48_A General control protein 81.8 1.9 6.6E-05 28.3 4.0 29 279-307 3-31 (33)
75 3i00_A HIP-I, huntingtin-inter 81.6 10 0.00035 31.2 9.4 48 251-305 36-83 (120)
76 1ci6_A Transcription factor AT 81.5 1.8 6.1E-05 31.7 4.3 28 278-305 25-52 (63)
77 1t6f_A Geminin; coiled-coil, c 81.4 2.9 0.0001 28.0 4.8 29 268-296 6-34 (37)
78 2oa5_A Hypothetical protein BQ 81.3 4.5 0.00015 33.2 7.0 25 255-279 8-32 (110)
79 1jnm_A Proto-oncogene C-JUN; B 81.2 12 0.00041 26.9 8.6 28 278-305 24-51 (62)
80 1gu4_A CAAT/enhancer binding p 81.1 11 0.00037 28.9 8.8 53 233-285 18-73 (78)
81 2yy0_A C-MYC-binding protein; 80.8 3 0.0001 29.8 5.2 14 290-303 33-46 (53)
82 1gk6_A Vimentin; intermediate 80.1 6.6 0.00023 28.3 6.9 50 257-306 2-51 (59)
83 3a7p_A Autophagy protein 16; c 80.1 5.7 0.0002 34.3 7.5 25 278-302 98-122 (152)
84 2zxx_A Geminin; coiled-coil, c 80.0 6.7 0.00023 30.4 7.2 37 269-305 34-70 (79)
85 2dfs_A Myosin-5A; myosin-V, in 79.9 13 0.00045 40.4 12.1 32 255-286 1016-1047(1080)
86 1a93_B MAX protein, coiled coi 79.7 2.8 9.5E-05 27.8 4.2 29 274-302 5-33 (34)
87 2wt7_B Transcription factor MA 79.5 15 0.00051 29.0 9.2 56 247-302 29-88 (90)
88 3oja_A Leucine-rich immune mol 79.2 22 0.00076 34.0 12.4 55 249-303 429-483 (487)
89 2wvr_A Geminin; DNA replicatio 78.9 5.3 0.00018 36.0 7.2 39 268-306 114-152 (209)
90 1uii_A Geminin; human, DNA rep 78.8 13 0.00045 29.0 8.6 36 268-303 45-80 (83)
91 1nlw_A MAD protein, MAX dimeri 78.7 4 0.00014 31.2 5.6 31 255-285 47-77 (80)
92 2wt7_A Proto-oncogene protein 78.7 16 0.00055 26.4 9.5 28 278-305 25-52 (63)
93 1x8y_A Lamin A/C; structural p 78.7 19 0.00066 27.6 9.6 53 254-306 27-79 (86)
94 3oja_B Anopheles plasmodium-re 78.4 7.2 0.00025 38.1 8.8 26 280-305 548-573 (597)
95 3m9b_A Proteasome-associated A 78.2 2.3 7.7E-05 39.4 4.8 44 261-304 53-96 (251)
96 1fmh_A General control protein 77.9 4.5 0.00015 26.1 4.7 28 257-284 3-30 (33)
97 4h22_A Leucine-rich repeat fli 77.6 11 0.00038 30.5 8.1 74 230-306 6-81 (103)
98 3jsv_C NF-kappa-B essential mo 77.2 22 0.00076 28.3 9.6 66 239-304 7-75 (94)
99 3o0z_A RHO-associated protein 77.0 14 0.00046 32.4 9.1 50 248-299 29-78 (168)
100 2fxo_A Myosin heavy chain, car 77.0 17 0.00059 29.6 9.4 23 280-302 101-123 (129)
101 2xv5_A Lamin-A/C; structural p 76.9 20 0.00068 27.1 9.0 49 258-306 8-56 (74)
102 1ic2_A Tropomyosin alpha chain 76.7 19 0.00066 27.1 8.9 51 255-305 20-70 (81)
103 1wt6_A Myotonin-protein kinase 76.7 25 0.00084 27.4 10.0 60 242-304 14-73 (81)
104 2r2v_A GCN4 leucine zipper; co 75.6 4 0.00014 27.0 4.1 28 256-283 2-29 (34)
105 1dip_A Delta-sleep-inducing pe 75.4 1.7 5.9E-05 33.5 2.7 25 273-297 19-43 (78)
106 2lw1_A ABC transporter ATP-bin 75.0 12 0.00042 28.6 7.5 51 254-304 21-77 (89)
107 2v4h_A NF-kappa-B essential mo 74.8 33 0.0011 28.0 11.4 66 241-306 31-106 (110)
108 3u59_A Tropomyosin beta chain; 74.7 21 0.0007 28.0 8.9 13 290-302 86-98 (101)
109 3u1c_A Tropomyosin alpha-1 cha 74.2 21 0.00073 28.1 8.9 47 256-302 24-70 (101)
110 3ol1_A Vimentin; structural ge 74.0 20 0.00068 29.0 8.9 33 273-305 66-98 (119)
111 1joc_A EEA1, early endosomal a 74.0 22 0.00074 29.0 9.2 47 255-301 11-57 (125)
112 3c3f_A Alpha/beta peptide with 73.9 5.3 0.00018 26.4 4.3 30 278-307 3-32 (34)
113 4h22_A Leucine-rich repeat fli 73.5 16 0.00056 29.6 8.1 47 255-301 37-83 (103)
114 3c3g_A Alpha/beta peptide with 73.2 5.7 0.0002 26.1 4.3 29 279-307 3-31 (33)
115 3m91_A Proteasome-associated A 73.2 16 0.00054 26.0 7.1 33 274-306 14-46 (51)
116 2wuj_A Septum site-determining 73.1 3 0.0001 29.9 3.4 27 256-282 28-54 (57)
117 2v66_B Nuclear distribution pr 73.1 27 0.00094 28.5 9.5 56 246-301 47-102 (111)
118 1dip_A Delta-sleep-inducing pe 73.0 3.7 0.00013 31.6 4.0 22 255-276 22-43 (78)
119 3iv1_A Tumor susceptibility ge 72.6 31 0.001 26.6 9.6 51 255-305 18-68 (78)
120 1nkp_A C-MYC, MYC proto-oncoge 72.6 10 0.00035 29.3 6.5 24 280-303 63-86 (88)
121 1am9_A Srebp-1A, protein (ster 72.2 5.8 0.0002 30.1 5.0 64 240-303 8-77 (82)
122 1gk7_A Vimentin; intermediate 71.6 5.7 0.00019 26.8 4.2 30 272-301 9-38 (39)
123 2ocy_A RAB guanine nucleotide 71.2 15 0.00052 31.6 7.9 49 257-305 46-94 (154)
124 2xdj_A Uncharacterized protein 70.7 25 0.00085 27.1 8.3 44 248-291 20-63 (83)
125 3nmd_A CGMP dependent protein 70.5 16 0.00054 27.8 7.0 28 252-279 37-64 (72)
126 3na7_A HP0958; flagellar bioge 70.1 17 0.00059 32.5 8.5 8 260-267 37-44 (256)
127 2wuj_A Septum site-determining 69.3 4.8 0.00016 28.8 3.7 29 278-306 29-57 (57)
128 1go4_E MAD1 (mitotic arrest de 68.2 8.5 0.00029 31.0 5.3 31 276-306 12-42 (100)
129 4ati_A MITF, microphthalmia-as 68.2 1.9 6.6E-05 35.2 1.6 25 284-308 92-116 (118)
130 2w83_C C-JUN-amino-terminal ki 68.0 9.3 0.00032 29.5 5.3 38 259-296 34-71 (77)
131 3oja_A Leucine-rich immune mol 68.0 45 0.0015 31.8 11.4 53 246-298 433-485 (487)
132 1hjb_A Ccaat/enhancer binding 67.4 34 0.0012 26.6 8.6 57 233-289 18-77 (87)
133 3htk_A Structural maintenance 67.0 27 0.00092 24.4 7.3 44 261-304 11-54 (60)
134 1fmh_B General control protein 67.0 9.2 0.00031 24.6 4.2 30 278-307 3-32 (33)
135 1nkp_B MAX protein, MYC proto- 65.8 20 0.00068 26.9 6.8 29 274-302 52-80 (83)
136 3q8t_A Beclin-1; autophagy, AT 65.6 47 0.0016 26.0 11.7 65 239-303 30-94 (96)
137 2j5u_A MREC protein; bacterial 65.4 3.1 0.0001 37.9 2.5 33 267-299 24-59 (255)
138 3ra3_A P1C; coiled coil domain 65.1 4.3 0.00015 25.3 2.3 24 265-288 3-26 (28)
139 3m0d_C TNF receptor-associated 65.1 37 0.0013 24.7 9.1 52 255-306 6-57 (65)
140 1kd8_B GABH BLL, GCN4 acid bas 65.1 9.8 0.00034 25.4 4.2 26 281-306 6-31 (36)
141 1wlq_A Geminin; coiled-coil; 2 65.0 27 0.00091 27.3 7.4 34 268-301 37-70 (83)
142 1nkp_A C-MYC, MYC proto-oncoge 64.9 28 0.00095 26.8 7.6 35 254-288 51-85 (88)
143 3ghg_A Fibrinogen alpha chain; 64.1 32 0.0011 35.1 9.7 34 273-306 114-147 (562)
144 3plt_A Sphingolipid long chain 63.7 30 0.001 31.7 8.6 67 233-304 92-159 (234)
145 3ghg_A Fibrinogen alpha chain; 63.3 26 0.00088 35.7 8.8 47 255-301 110-156 (562)
146 2bni_A General control protein 62.9 10 0.00035 25.0 4.0 29 278-306 3-31 (34)
147 1wt6_A Myotonin-protein kinase 62.5 23 0.00079 27.5 6.6 34 272-305 34-67 (81)
148 3tnu_A Keratin, type I cytoske 62.3 62 0.0021 26.3 10.2 52 255-306 77-128 (131)
149 3tnu_B Keratin, type II cytosk 62.1 61 0.0021 26.2 9.9 51 256-306 76-126 (129)
150 3bas_A Myosin heavy chain, str 61.8 49 0.0017 25.4 8.5 50 257-306 30-79 (89)
151 2oqq_A Transcription factor HY 61.5 21 0.00073 24.6 5.5 24 255-278 17-40 (42)
152 3cvf_A Homer-3, homer protein 61.2 53 0.0018 25.2 8.4 49 255-303 27-75 (79)
153 4emc_A Monopolin complex subun 60.9 20 0.00069 31.9 6.8 14 264-277 22-35 (190)
154 1uo4_A General control protein 60.8 13 0.00045 24.5 4.2 28 279-306 4-31 (34)
155 3htk_A Structural maintenance 60.5 40 0.0014 23.5 8.5 50 252-301 9-58 (60)
156 1uix_A RHO-associated kinase; 59.6 42 0.0014 25.4 7.4 30 260-289 2-31 (71)
157 1j1d_B Troponin T, TNT; THIN f 59.3 68 0.0023 25.8 9.2 43 265-307 45-87 (106)
158 3mq9_A Bone marrow stromal ant 58.6 65 0.0022 30.5 10.5 34 274-307 434-467 (471)
159 2oto_A M protein; helical coil 58.6 54 0.0019 27.2 8.9 31 258-288 53-83 (155)
160 2e7s_A RAB guanine nucleotide 58.2 31 0.0011 29.1 7.2 51 256-306 33-83 (135)
161 4ath_A MITF, microphthalmia-as 58.2 30 0.001 26.9 6.6 17 288-304 61-77 (83)
162 3qh9_A Liprin-beta-2; coiled-c 57.9 64 0.0022 25.0 8.8 28 255-282 26-53 (81)
163 2wq1_A General control protein 57.8 17 0.00059 23.8 4.3 28 280-307 4-31 (33)
164 1am9_A Srebp-1A, protein (ster 57.5 48 0.0016 25.0 7.6 27 254-280 49-75 (82)
165 3mq9_A Bone marrow stromal ant 57.1 75 0.0026 30.1 10.7 29 275-303 442-470 (471)
166 1p9i_A Cortexillin I/GCN4 hybr 55.9 17 0.00057 23.1 3.9 26 259-284 3-28 (31)
167 1fmh_A General control protein 55.5 21 0.00071 22.9 4.3 28 279-306 4-31 (33)
168 1s1c_X RHO-associated, coiled- 55.3 41 0.0014 25.5 6.7 31 259-289 3-33 (71)
169 1zme_C Proline utilization tra 54.9 11 0.00038 26.6 3.4 24 255-278 44-67 (70)
170 2j5u_A MREC protein; bacterial 54.3 7.7 0.00026 35.2 3.1 24 255-278 36-59 (255)
171 2hy6_A General control protein 54.1 15 0.00051 24.3 3.6 28 279-306 4-31 (34)
172 2fic_A Bridging integrator 1; 53.9 60 0.0021 28.2 8.8 11 292-302 199-209 (251)
173 1gk4_A Vimentin; intermediate 53.7 70 0.0024 24.2 11.9 71 234-306 7-77 (84)
174 1jcd_A Major outer membrane li 53.5 57 0.002 23.2 7.7 36 256-291 5-40 (52)
175 2xzr_A Immunoglobulin-binding 52.9 90 0.0031 25.2 10.7 71 237-307 34-107 (114)
176 3trt_A Vimentin; cytoskeleton, 52.7 61 0.0021 23.6 7.4 54 240-296 23-76 (77)
177 3w03_C DNA repair protein XRCC 51.9 22 0.00075 31.4 5.5 29 256-284 153-181 (184)
178 3i00_A HIP-I, huntingtin-inter 51.4 78 0.0027 25.9 8.4 38 244-281 36-80 (120)
179 4dzn_A Coiled-coil peptide CC- 51.3 40 0.0014 21.6 5.2 25 259-283 6-30 (33)
180 4b4t_K 26S protease regulatory 50.4 24 0.00083 34.3 6.1 45 259-303 46-90 (428)
181 2oto_A M protein; helical coil 50.1 60 0.002 27.0 7.8 44 260-303 34-77 (155)
182 3he5_B Synzip2; heterodimeric 50.1 56 0.0019 22.8 6.2 20 267-286 22-41 (52)
183 1nlw_A MAD protein, MAX dimeri 49.4 37 0.0013 25.7 5.8 15 286-300 64-78 (80)
184 3nmd_A CGMP dependent protein 48.6 45 0.0015 25.3 6.0 31 274-304 38-68 (72)
185 3bbp_D GRIP and coiled-coil do 48.6 17 0.00059 27.6 3.7 44 261-304 21-64 (71)
186 3vmx_A Voltage-gated hydrogen 48.6 56 0.0019 23.1 6.1 20 259-278 15-34 (48)
187 1d7m_A Cortexillin I; coiled-c 48.4 1E+02 0.0035 24.5 8.9 45 244-288 14-58 (101)
188 1ik9_A DNA repair protein XRCC 48.2 51 0.0017 29.3 7.4 15 108-122 60-74 (213)
189 3vkg_A Dynein heavy chain, cyt 48.1 46 0.0016 40.5 8.9 41 266-306 2032-2072(3245)
190 4ath_A MITF, microphthalmia-as 48.0 41 0.0014 26.2 5.8 33 254-286 48-80 (83)
191 2zvf_A Alanyl-tRNA synthetase; 47.6 12 0.00042 31.0 3.1 30 259-288 29-58 (171)
192 3mov_A Lamin-B1; LMNB1, B-type 47.4 99 0.0034 24.1 10.1 52 255-306 37-88 (95)
193 3oa7_A Head morphogenesis prot 47.2 68 0.0023 28.8 7.9 40 264-303 32-71 (206)
194 1ik9_A DNA repair protein XRCC 46.5 96 0.0033 27.5 8.9 24 256-279 140-163 (213)
195 1kd8_A GABH AIV, GCN4 acid bas 46.4 22 0.00074 23.8 3.4 17 287-303 12-28 (36)
196 3ra3_A P1C; coiled coil domain 45.8 23 0.00078 22.0 3.3 21 286-306 3-23 (28)
197 3e98_A GAF domain of unknown f 45.6 53 0.0018 29.6 7.2 16 270-285 97-112 (252)
198 3tnu_A Keratin, type I cytoske 45.4 1.1E+02 0.0037 24.8 8.5 7 291-297 92-98 (131)
199 1fmh_B General control protein 45.2 52 0.0018 21.1 5.0 29 257-285 3-31 (33)
200 1ytz_T Troponin T; muscle, THI 45.0 52 0.0018 26.5 6.3 61 247-307 20-87 (107)
201 1wle_A Seryl-tRNA synthetase; 45.0 64 0.0022 32.2 8.3 22 278-299 125-146 (501)
202 3q0x_A Centriole protein; cent 44.9 45 0.0015 30.3 6.6 58 233-296 162-219 (228)
203 2aze_A Transcription factor DP 44.8 55 0.0019 28.2 6.7 19 250-268 21-39 (155)
204 3a2a_A Voltage-gated hydrogen 44.7 67 0.0023 23.4 6.1 25 258-282 21-45 (58)
205 1hlo_A Protein (transcription 44.3 15 0.00052 27.5 2.9 14 254-267 28-41 (80)
206 3tnu_B Keratin, type II cytosk 43.7 1.2E+02 0.0041 24.4 8.5 25 258-282 46-70 (129)
207 1wle_A Seryl-tRNA synthetase; 43.2 2.5E+02 0.0085 27.9 12.2 19 287-305 120-138 (501)
208 2ve7_A Kinetochore protein HEC 43.0 34 0.0012 31.9 5.7 32 261-292 184-215 (315)
209 2efr_A General control protein 42.9 1.6E+02 0.0054 25.1 10.3 59 245-303 95-153 (155)
210 3vkg_A Dynein heavy chain, cyt 42.3 1.5E+02 0.0051 36.3 11.9 74 232-305 2010-2099(3245)
211 3q0x_A Centriole protein; cent 42.1 79 0.0027 28.6 7.7 15 272-286 202-216 (228)
212 4gkw_A Spindle assembly abnorm 41.7 1.1E+02 0.0038 26.0 8.0 27 279-305 136-162 (167)
213 1deq_A Fibrinogen (alpha chain 41.6 56 0.0019 31.9 7.0 35 272-306 116-150 (390)
214 1m1j_C Fibrinogen gamma chain; 41.3 73 0.0025 31.1 7.9 14 293-306 122-135 (409)
215 3m0a_A TNF receptor-associated 39.9 99 0.0034 22.0 8.8 16 290-305 40-55 (66)
216 2er8_A Regulatory protein Leu3 39.9 16 0.00054 26.1 2.3 21 254-274 48-68 (72)
217 3swk_A Vimentin; cytoskeleton, 39.6 1.2E+02 0.0043 23.0 8.4 28 278-305 51-78 (86)
218 3w03_C DNA repair protein XRCC 39.3 66 0.0022 28.3 6.5 34 255-288 145-178 (184)
219 2v4h_A NF-kappa-B essential mo 39.1 1.6E+02 0.0054 24.0 10.1 48 255-302 62-109 (110)
220 2lz1_A Nuclear factor erythroi 39.0 0.55 1.9E-05 37.3 -6.1 23 232-254 64-86 (90)
221 2oa5_A Hypothetical protein BQ 38.7 17 0.00059 29.8 2.5 22 279-300 11-32 (110)
222 1uii_A Geminin; human, DNA rep 38.7 1.4E+02 0.0047 23.3 7.7 23 259-281 50-72 (83)
223 2zvf_A Alanyl-tRNA synthetase; 38.3 73 0.0025 26.1 6.5 28 273-300 29-56 (171)
224 2ve7_C Kinetochore protein NUF 38.3 18 0.00062 32.8 2.9 37 271-307 143-179 (250)
225 4dzo_A Mitotic spindle assembl 37.8 63 0.0022 26.4 5.8 35 255-289 4-38 (123)
226 3a5t_A Transcription factor MA 37.0 2.3 7.9E-05 34.6 -2.9 37 270-306 59-95 (107)
227 4b4t_K 26S protease regulatory 36.7 65 0.0022 31.3 6.7 40 257-296 51-90 (428)
228 3lay_A Zinc resistance-associa 36.6 68 0.0023 27.8 6.2 9 121-129 30-38 (175)
229 1zxa_A CGMP-dependent protein 36.5 69 0.0024 23.9 5.3 32 251-282 21-52 (67)
230 2r2v_A GCN4 leucine zipper; co 36.5 56 0.0019 21.5 4.2 26 280-305 5-30 (34)
231 3cve_A Homer protein homolog 1 36.2 1.4E+02 0.0047 22.6 10.7 48 255-302 21-68 (72)
232 1deb_A APC protein, adenomatou 36.2 1.2E+02 0.004 21.8 6.2 24 258-281 13-36 (54)
233 3qh9_A Liprin-beta-2; coiled-c 35.9 1.5E+02 0.0052 22.9 7.9 41 257-297 35-75 (81)
234 2eqb_B RAB guanine nucleotide 35.3 1.7E+02 0.0058 23.3 11.7 52 255-306 12-63 (97)
235 3cl3_D NF-kappa-B essential mo 34.7 12 0.00041 31.5 1.0 17 291-307 56-72 (130)
236 1f5n_A Interferon-induced guan 34.3 3.8E+02 0.013 27.1 12.7 17 289-305 566-582 (592)
237 4emc_A Monopolin complex subun 33.5 1.8E+02 0.0062 25.7 8.4 22 263-284 35-56 (190)
238 1hlo_A Protein (transcription 33.4 41 0.0014 25.0 3.7 22 283-304 57-78 (80)
239 2qyw_A Vesicle transport throu 33.4 1.7E+02 0.0058 22.8 8.4 56 252-307 46-102 (102)
240 2q6q_A Spindle POLE BODY compo 32.7 1.6E+02 0.0055 22.3 8.2 30 276-305 31-60 (74)
241 2p4v_A Transcription elongatio 32.0 2.1E+02 0.0073 23.8 8.4 24 283-306 46-69 (158)
242 3mtu_A Tropomyosin alpha-1 cha 32.0 88 0.003 23.4 5.4 47 255-301 16-62 (75)
243 2fxo_A Myosin heavy chain, car 31.9 2E+02 0.0068 23.1 12.6 41 258-298 65-105 (129)
244 1m1j_A Fibrinogen alpha subuni 31.6 1.6E+02 0.0054 29.6 8.5 35 272-306 114-148 (491)
245 1jcd_A Major outer membrane li 31.2 1.4E+02 0.0048 21.1 7.6 19 258-276 14-32 (52)
246 2dq0_A Seryl-tRNA synthetase; 31.0 1.9E+02 0.0065 28.2 9.0 29 274-302 74-102 (455)
247 1ses_A Seryl-tRNA synthetase; 31.0 3.6E+02 0.012 25.8 11.2 27 274-300 69-95 (421)
248 1m1j_B Fibrinogen beta chain; 30.7 4.1E+02 0.014 26.3 12.6 12 234-245 106-117 (464)
249 3rrk_A V-type ATPase 116 kDa s 30.3 1.5E+02 0.0053 27.0 7.9 28 257-284 228-255 (357)
250 3mud_A DNA repair protein XRCC 29.2 2.1E+02 0.0073 24.9 8.1 13 108-120 63-75 (175)
251 3he4_A Synzip6; heterodimeric 29.1 83 0.0028 22.2 4.4 32 258-289 20-51 (56)
252 3s4r_A Vimentin; alpha-helix, 28.9 2E+02 0.0068 22.2 11.5 39 268-306 55-93 (93)
253 3uux_B Mitochondrial division 28.1 2E+02 0.0067 26.4 7.9 75 229-303 150-225 (242)
254 1lwu_C Fibrinogen gamma chain; 27.7 1.7E+02 0.0057 27.7 7.7 21 264-284 28-48 (323)
255 1m1j_B Fibrinogen beta chain; 27.4 1.9E+02 0.0067 28.7 8.4 6 111-116 42-47 (464)
256 2zqm_A Prefoldin beta subunit 27.4 1.4E+02 0.0047 22.9 6.0 19 260-278 75-93 (117)
257 2akf_A Coronin-1A; coiled coil 27.1 1.3E+02 0.0043 19.3 4.8 26 259-284 3-28 (32)
258 3ol1_A Vimentin; structural ge 27.0 2.4E+02 0.0082 22.5 11.4 33 267-299 67-99 (119)
259 3ljm_A Coil Ser L9C; de novo d 26.9 1.2E+02 0.0042 19.1 4.5 23 258-280 4-26 (31)
260 1lwu_C Fibrinogen gamma chain; 26.8 1.9E+02 0.0065 27.3 7.9 25 258-282 29-53 (323)
261 3qne_A Seryl-tRNA synthetase, 26.5 2E+02 0.0068 28.6 8.3 23 277-299 79-101 (485)
262 1grj_A GREA protein; transcrip 26.2 2.8E+02 0.0096 23.0 8.5 49 258-306 12-69 (158)
263 1deq_A Fibrinogen (alpha chain 26.1 1.9E+02 0.0064 28.3 7.8 45 255-299 113-157 (390)
264 3iv1_A Tumor susceptibility ge 26.0 2.2E+02 0.0076 21.7 10.4 55 251-305 21-75 (78)
265 4b4t_J 26S protease regulatory 25.9 76 0.0026 30.8 5.1 33 255-287 25-57 (405)
266 3gp4_A Transcriptional regulat 25.8 1.8E+02 0.0061 23.7 6.7 33 255-287 88-120 (142)
267 1gmj_A ATPase inhibitor; coile 25.8 2.3E+02 0.008 22.0 9.6 8 242-249 24-31 (84)
268 4e61_A Protein BIM1; EB1-like 25.8 1.4E+02 0.0048 24.1 5.8 18 263-280 19-36 (106)
269 2l5g_A GPS2 protein, G protein 25.2 80 0.0027 21.2 3.5 20 255-274 15-34 (38)
270 3qne_A Seryl-tRNA synthetase, 25.1 5.1E+02 0.018 25.7 11.5 17 288-304 76-92 (485)
271 2xv5_A Lamin-A/C; structural p 24.9 2.2E+02 0.0075 21.3 8.3 49 249-297 6-54 (74)
272 1ic2_A Tropomyosin alpha chain 24.5 2.2E+02 0.0074 21.1 11.5 47 252-298 24-70 (81)
273 1m1j_A Fibrinogen alpha subuni 24.0 2.8E+02 0.0095 27.9 8.7 47 255-301 111-157 (491)
274 4ani_A Protein GRPE; chaperone 23.9 1.9E+02 0.0064 25.8 6.9 25 257-281 68-92 (213)
275 3r2p_A Apolipoprotein A-I; amp 23.7 2.1E+02 0.007 24.2 7.0 15 255-269 89-103 (185)
276 3tq7_B Microtubule-associated 23.6 1.6E+02 0.0054 22.7 5.5 46 255-300 8-53 (82)
277 2nrj_A HBL B protein; enteroto 23.4 1.9E+02 0.0066 27.1 7.3 54 254-307 122-193 (346)
278 3trt_A Vimentin; cytoskeleton, 22.7 2.2E+02 0.0075 20.5 8.4 31 276-306 42-72 (77)
279 2ve7_A Kinetochore protein HEC 22.4 1.1E+02 0.0038 28.4 5.4 51 254-307 184-234 (315)
280 4dzn_A Coiled-coil peptide CC- 22.4 1.6E+02 0.0055 18.8 4.8 8 267-274 7-14 (33)
281 2i1j_A Moesin; FERM, coiled-co 22.2 71 0.0024 32.1 4.3 48 257-304 337-384 (575)
282 4dyl_A Tyrosine-protein kinase 22.2 4.9E+02 0.017 24.4 11.2 63 245-307 320-390 (406)
283 3s84_A Apolipoprotein A-IV; fo 22.1 2.4E+02 0.0084 25.6 7.5 62 243-307 164-226 (273)
284 1l8d_A DNA double-strand break 21.6 2.7E+02 0.0092 21.2 6.7 39 253-291 62-100 (112)
285 2aze_B Transcription factor E2 21.6 2.2E+02 0.0076 22.5 6.3 34 257-290 8-41 (106)
286 4e61_A Protein BIM1; EB1-like 21.5 3.2E+02 0.011 22.0 8.0 22 257-278 27-48 (106)
287 3kin_B Kinesin heavy chain; mo 21.3 98 0.0034 24.8 4.2 13 267-279 94-106 (117)
288 1joc_A EEA1, early endosomal a 21.2 3.2E+02 0.011 21.9 8.2 34 256-289 19-52 (125)
289 2l5g_B Putative uncharacterize 21.0 1.9E+02 0.0064 19.9 4.8 31 259-289 6-36 (42)
290 3fx0_A NF-kappa-B essential mo 20.9 43 0.0015 26.8 1.9 52 251-302 34-88 (96)
291 3tq2_A KE1; parallel three hel 20.9 1.8E+02 0.0062 18.9 5.3 30 273-302 5-34 (36)
292 3iox_A AGI/II, PA; alpha helix 20.8 3.7E+02 0.013 27.1 8.9 31 257-287 36-66 (497)
293 1fxk_C Protein (prefoldin); ar 20.7 3.1E+02 0.011 21.5 8.1 31 258-288 98-128 (133)
294 3q4f_C DNA repair protein XRCC 20.5 1.7E+02 0.0057 25.9 5.7 23 255-277 161-183 (186)
295 2xnx_M M protein, M1-BC1; cell 20.2 4E+02 0.014 22.6 8.8 9 294-302 98-106 (146)
296 1avy_A Fibritin, gpwac M; bact 20.0 2.5E+02 0.0087 21.3 5.8 33 257-289 10-42 (74)
297 3q8t_A Beclin-1; autophagy, AT 20.0 3.1E+02 0.011 21.2 12.4 65 241-305 25-89 (96)
No 1
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=99.53 E-value=9.8e-15 Score=106.80 Aligned_cols=53 Identities=34% Similarity=0.596 Sum_probs=49.4
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 234 KRARRMLSNRESARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYD 286 (308)
Q Consensus 234 KR~RR~lsNReSArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~ 286 (308)
||.+||++||+||++||.||++|+++||.+|..|+.||..|..++..|++.|.
T Consensus 1 kr~rR~~~NResA~rSR~RKk~~~~~LE~~v~~L~~eN~~L~~~~~~L~~~~~ 53 (55)
T 1dh3_A 1 KREVRLMKNREAARESRRKKKEYVKSLENRVAVLENQNKTLIEELKALKDLYS 53 (55)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTST
T ss_pred ChHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 58899999999999999999999999999999999999999999998877653
No 2
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=99.29 E-value=1.2e-11 Score=92.34 Aligned_cols=57 Identities=23% Similarity=0.365 Sum_probs=50.8
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 233 DKRARRMLSNRESARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESA 289 (308)
Q Consensus 233 ~KR~RR~lsNReSArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~ 289 (308)
+||.+|+++||++|++||.||++++.+|+.+|..|+.+|..|..++..|+.++..|.
T Consensus 1 Ekr~rrrerNR~AA~rcR~rKk~~~~~Le~~v~~L~~~n~~L~~ei~~L~~e~~~Lk 57 (63)
T 2wt7_A 1 EKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQTEIANLLKEKEKLE 57 (63)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 379999999999999999999999999999999999999999999886666555443
No 3
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=99.24 E-value=3.4e-11 Score=89.03 Aligned_cols=53 Identities=26% Similarity=0.382 Sum_probs=47.5
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 234 KRARRMLSNRESARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYD 286 (308)
Q Consensus 234 KR~RR~lsNReSArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~ 286 (308)
||.+|+++||++|++||.||++|+.+|+.+|..|+.+|..|..++..|+.++.
T Consensus 1 kR~~r~erNr~AA~k~R~rKk~~~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~ 53 (61)
T 1t2k_D 1 KRRKFLERNRAAASRSRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVA 53 (61)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68899999999999999999999999999999999999999998875444433
No 4
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=99.18 E-value=3.6e-11 Score=90.08 Aligned_cols=47 Identities=28% Similarity=0.388 Sum_probs=41.7
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 240 LSNRESARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYD 286 (308)
Q Consensus 240 lsNReSArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~ 286 (308)
.+||+||+|||.||++|+.+|+.+|..|+.+|..|..++..|++++.
T Consensus 15 ~rNreAArrsR~RK~~~~~~Le~~v~~L~~eN~~L~~ev~~Lr~~l~ 61 (63)
T 2dgc_A 15 ARNTEAARRSRARKLQRMKQLEDKVEELLSKNYHLENEVARLKKLVG 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44999999999999999999999999999999999998888877653
No 5
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=99.14 E-value=1.1e-10 Score=86.65 Aligned_cols=52 Identities=29% Similarity=0.429 Sum_probs=46.3
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 234 KRARRMLSNRESARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKY 285 (308)
Q Consensus 234 KR~RR~lsNReSArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~ 285 (308)
|+.+|..+||++|++||.||++++.+|+.+|..|+.+|..|..++..|..++
T Consensus 1 K~errr~rNr~AA~k~R~rKk~~~~~Le~~v~~L~~~n~~L~~~v~~L~~e~ 52 (62)
T 1jnm_A 1 KAERKRMRNRIAASKSRKRKLERIARLEEKVKTLKAQNSELASTANMLREQV 52 (62)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678889999999999999999999999999999999999999887654443
No 6
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=99.01 E-value=1e-09 Score=84.03 Aligned_cols=61 Identities=38% Similarity=0.431 Sum_probs=52.8
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 236 ARRMLSNRESARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILK 296 (308)
Q Consensus 236 ~RR~lsNReSArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lr 296 (308)
.||+..||.++|..|.||++||.+||.+|..|+.++..|..++..|..++..|..||..||
T Consensus 10 ~kR~~qNR~AQRafReRK~~~i~~LE~~v~~le~~~~~l~~en~~Lr~~i~~L~~El~~lr 70 (70)
T 1gd2_E 10 SKRKAQNRAAQRAFRKRKEDHLKALETQVVTLKELHSSTTLENDQLRQKVRQLEEELRILK 70 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHC-
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 5888999999999999999999999999999999999887777777777777777776654
No 7
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=98.91 E-value=3.3e-09 Score=79.23 Aligned_cols=59 Identities=25% Similarity=0.335 Sum_probs=46.1
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 234 KRARRMLSNRESARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADI 299 (308)
Q Consensus 234 KR~RR~lsNReSArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l 299 (308)
|+.+++.+||.+|+|+|.||++++.+|+.++..|+.+|..|..++.. |..|+..|+.-|
T Consensus 2 k~~rKr~rNr~AA~R~R~KKk~~~~~le~~~~~L~~~N~~L~~~i~~-------L~~E~~~Lk~ll 60 (63)
T 1ci6_A 2 KKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADS-------LAKEIQYLKDLI 60 (63)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHH
T ss_pred chHhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHH
Confidence 67888999999999999999999999999999999999999998875 555556665544
No 8
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=98.51 E-value=5.6e-07 Score=70.10 Aligned_cols=56 Identities=21% Similarity=0.240 Sum_probs=47.2
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 233 DKRARRMLSNRESARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDES 288 (308)
Q Consensus 233 ~KR~RR~lsNReSArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l 288 (308)
.+-..|..+|.++|+|||.++++...+++.++..|+.||..|..++..|..++..|
T Consensus 14 ~~Y~~rR~rNN~AakrSR~krk~r~~e~~~r~~~L~~eN~~L~~~v~~L~~E~~~L 69 (78)
T 1gu4_A 14 DEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTL 69 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455578999999999999999999999999999999999999988655554443
No 9
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=98.50 E-value=6.9e-07 Score=70.89 Aligned_cols=56 Identities=21% Similarity=0.255 Sum_probs=47.3
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 232 DDKRARRMLSNRESARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDE 287 (308)
Q Consensus 232 e~KR~RR~lsNReSArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~ 287 (308)
+.+-..|..+|.++|+|||.++++...+++.++..|+.||..|..++..|+.++..
T Consensus 13 d~~Y~~rR~rNN~AarrSR~krk~r~~e~~~r~~~Le~EN~~Lr~~v~~L~~E~~~ 68 (87)
T 1hjb_A 13 SDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELST 68 (87)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555667899999999999999999999999999999999999999865444443
No 10
>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus}
Probab=98.41 E-value=1.1e-08 Score=84.02 Aligned_cols=48 Identities=31% Similarity=0.375 Sum_probs=37.8
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 231 VDDKRARRMLSNRESARRSRRRKQAHLNELETQAGQLRAEHSSLLKGL 278 (308)
Q Consensus 231 ~e~KR~RR~lsNReSArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el 278 (308)
.+.|..||.++||.+|+.||.||.+.+.+||.++..|..+...|..++
T Consensus 34 ~~lK~~RR~lKNR~yAq~CR~rk~~~~~~LE~e~~~L~~e~e~L~~En 81 (107)
T 3a5t_A 34 IQLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASEN 81 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSTTTTTTSTT
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467999999999999999999999999999966655554444443333
No 11
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=98.20 E-value=9.7e-06 Score=64.73 Aligned_cols=55 Identities=24% Similarity=0.325 Sum_probs=44.8
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 231 VDDKRARRMLSNRESARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKY 285 (308)
Q Consensus 231 ~e~KR~RR~lsNReSArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~ 285 (308)
...|..||.++||.+|+-+|.||.....+||.++..|..+...|..++..+..+.
T Consensus 24 ~~lKq~RRtlKNRgyAq~CR~Kr~~q~~~LE~e~~~L~~e~~~L~~e~~~~~~e~ 78 (90)
T 2wt7_B 24 IRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARER 78 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678889999999999999999999999999888888777777766666544333
No 12
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=97.46 E-value=0.00029 Score=48.81 Aligned_cols=40 Identities=28% Similarity=0.371 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 254 QAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIE 300 (308)
Q Consensus 254 k~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~ 300 (308)
|+|+.+||.++..|+..|++|..++. .|..||..||+-+.
T Consensus 2 KaYl~eLE~r~k~le~~naeLEervs-------tLq~EN~mLRqvl~ 41 (42)
T 2oqq_A 2 SAYLSELENRVKDLENKNSELEERLS-------TLQNENQMLRHILK 41 (42)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHH-------HHHHhHHHHHHHhc
Confidence 58999999999999988888877665 68899999998653
No 13
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=95.59 E-value=0.065 Score=38.63 Aligned_cols=50 Identities=20% Similarity=0.267 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 257 LNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 257 l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
.+.|-.||+.|+.||..|+++|.+-..++..|++|-.-+|.-+..|+.++
T Consensus 5 YdQL~~QVe~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevlk~lq~~i 54 (54)
T 1deb_A 5 YDQLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQLQGSI 54 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHHHHHcccC
Confidence 35788999999999999999999999999999999999998888887653
No 14
>1skn_P DNA-binding domain of SKN-1; complex (transcription factor/DNA), transcription/DNA complex; HET: DNA LDA; 2.50A {Caenorhabditis elegans} SCOP: a.37.1.1
Probab=95.50 E-value=0.0066 Score=48.46 Aligned_cols=32 Identities=22% Similarity=0.309 Sum_probs=26.9
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 021757 231 VDDKRARRMLSNRESARRSRRRKQAHLNELET 262 (308)
Q Consensus 231 ~e~KR~RR~lsNReSArRSR~RKk~~l~eLE~ 262 (308)
...|..||..+||.+|+++|.||...+.+|+.
T Consensus 59 ~~ir~~RRR~KNr~AA~~CRkrK~~~~d~l~~ 90 (92)
T 1skn_P 59 QLIRKIRRRGKNKVAARTCRQRRTDRHDKMSH 90 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhc
Confidence 35788899999999999999999998877753
No 15
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=95.26 E-value=0.095 Score=41.01 Aligned_cols=50 Identities=16% Similarity=0.270 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 257 LNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 257 l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
+.-|.-+|+.|+.+|..|..++..++.....+..+|..|+.+....+.+|
T Consensus 22 I~lLqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl 71 (81)
T 2jee_A 22 ITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERL 71 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566667777777777777777777778888888888888877765
No 16
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=95.05 E-value=0.095 Score=38.93 Aligned_cols=41 Identities=24% Similarity=0.258 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 257 LNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKA 297 (308)
Q Consensus 257 l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra 297 (308)
|..-|.+|.+|..-|..|..++..++.+++.|.+||..||.
T Consensus 22 LaaSeAkiQQLmkVN~~ls~Elr~mQ~~lq~LQsen~~Lr~ 62 (63)
T 2w6a_A 22 LATSEAKVQQLMKVNSSLSDELRKLQREIHKLQAENLQLRQ 62 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhhHHHHHHHHHHhHhhhHHHHHHHHHHHHHHhhhhhhcc
Confidence 45668899999999999999999999999999999999984
No 17
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=94.82 E-value=0.13 Score=43.40 Aligned_cols=52 Identities=19% Similarity=0.156 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
.....|+.++..+..|...|+.++..++.++..+..++..|+.++..|+.++
T Consensus 75 ~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~ 126 (138)
T 3hnw_A 75 KMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNI 126 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456666666666666666666666666666666666666555555555443
No 18
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=93.84 E-value=0.33 Score=37.96 Aligned_cols=49 Identities=14% Similarity=0.150 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLR 303 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lr 303 (308)
.-++.||.+|..+-....-|.-++..|+++...|..+|..++...+.|+
T Consensus 6 ElleqLE~KIq~avdtI~lLqmEieELKekN~~L~~e~~e~~~~~~~L~ 54 (81)
T 2jee_A 6 EVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELE 54 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 4577888888888888888888888888888888888888555444443
No 19
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=92.98 E-value=0.54 Score=38.12 Aligned_cols=47 Identities=21% Similarity=0.238 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 258 NELETQAGQLRAEHSSLLK-------GLTDVNQKYDESAVNNRILKADIETLRA 304 (308)
Q Consensus 258 ~eLE~qV~~Le~EN~~L~~-------el~~L~qk~~~l~~ENr~Lra~l~~Lra 304 (308)
-+||.+++.|+.||..|+. ++..|..++..|..||..|+.+-+-.++
T Consensus 40 l~LE~~~s~le~e~~rlr~~~~~~~~~v~eLe~everL~~ENq~L~~e~~~~~~ 93 (104)
T 3s9g_A 40 LELEKSLSRMEDENNRLRLESKRLDARVRELELELDRLRAENLQLLTENELHRQ 93 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4577777777777777765 6777777777788888888777665554
No 20
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=92.60 E-value=0.71 Score=37.33 Aligned_cols=52 Identities=19% Similarity=0.169 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------HHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 256 HLNELETQAGQLRAEHSSLLKGLTDVN----------------------------QKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 256 ~l~eLE~qV~~Le~EN~~L~~el~~L~----------------------------qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
.+..|..+|+.|+.||..|..++..|. .-++....+-..|+++++.|+.+|+
T Consensus 13 ~~~~lr~ei~~Le~E~~rLr~~~~~LE~~Le~~~l~Gd~~~~~TKVlH~~~NPa~~a~~~~~~~~e~Lq~E~erLr~~v~ 92 (100)
T 1go4_E 13 EADTLRLKVEELEGERSRLEEEKRMLEAQLERRALQGDYDQSRTKVLHMSLNPTSVARQRLREDHSQLQAECERLRGLLR 92 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSCCCTTTEEEEEESSCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccCeeeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566666666666666666655443 3334455666778888888888875
No 21
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=92.37 E-value=0.95 Score=38.10 Aligned_cols=52 Identities=10% Similarity=0.064 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
+.+++++.++..|..+...+..++..+.+++..+..+|..|+.++..|.+.+
T Consensus 82 ~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~le~~~ 133 (138)
T 3hnw_A 82 LDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKLETEL 133 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666666666666666666666666677777777777777666654
No 22
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=91.11 E-value=2.2 Score=41.79 Aligned_cols=52 Identities=21% Similarity=0.256 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 256 HLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 256 ~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
.++++..+.+.++.|...|.+++...+++...+..||..+++++..|..++.
T Consensus 531 ~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~~~~~~~l~~~~~ 582 (597)
T 3oja_B 531 EADAKQKETEDLEQENIALEKQLDNKRAKQAELRQETSLKRQKVKQLEAKKN 582 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhhhhhcchhhHHhhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3444455566666777777777777778888888888888888888877653
No 23
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=90.52 E-value=1.7 Score=34.99 Aligned_cols=19 Identities=11% Similarity=0.155 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 021757 282 NQKYDESAVNNRILKADIE 300 (308)
Q Consensus 282 ~qk~~~l~~ENr~Lra~l~ 300 (308)
+.+...+...|..|+.+|.
T Consensus 75 r~e~~~~e~kn~~L~~qL~ 93 (97)
T 2eqb_B 75 RKEKYAIEILNKRLTEQLR 93 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 3444445555555555554
No 24
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=90.21 E-value=0.33 Score=32.02 Aligned_cols=27 Identities=15% Similarity=0.313 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 257 LNELETQAGQLRAEHSSLLKGLTDVNQ 283 (308)
Q Consensus 257 l~eLE~qV~~Le~EN~~L~~el~~L~q 283 (308)
+..||.+|+.|..+|..|..++..|+.
T Consensus 2 M~QLE~kVEeLl~~n~~Le~EV~RLk~ 28 (33)
T 3m48_A 2 MAQLEAKVEELLSKNWNLENEVARLKK 28 (33)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 456788888877777777777766553
No 25
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=89.75 E-value=1.4 Score=30.61 Aligned_cols=44 Identities=25% Similarity=0.306 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 256 HLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 256 ~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
.+..||.+|..|+.||..|.+++-.-+.-.. -|..+|..||.++
T Consensus 4 lvaqlenevaslenenetlkkknlhkkdlia-------ylekeianlrkki 47 (49)
T 3he5_A 4 LVAQLENEVASLENENETLKKKNLHKKDLIA-------YLEKEIANLRKKI 47 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcccHHHHHhcccHHHHHH-------HHHHHHHHHHHHh
Confidence 3567889999999999998877643333333 3445555555554
No 26
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=89.64 E-value=1.8 Score=33.02 Aligned_cols=45 Identities=13% Similarity=0.299 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 259 ELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLR 303 (308)
Q Consensus 259 eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lr 303 (308)
++..+++.++.+|..|..++..+++.+..-..+-..++.++..+-
T Consensus 4 ~~~~kLq~~E~~N~~Le~~v~~le~~Le~s~~~q~~~~~Elk~~~ 48 (72)
T 3cve_A 4 NSHMKLQEVEIRNKDLEGQLSEMEQRLEKSQSEQDAFRSNLKTLL 48 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666666666666666666666666666666665555544
No 27
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=89.56 E-value=0.46 Score=31.45 Aligned_cols=27 Identities=15% Similarity=0.193 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 256 HLNELETQAGQLRAEHSSLLKGLTDVN 282 (308)
Q Consensus 256 ~l~eLE~qV~~Le~EN~~L~~el~~L~ 282 (308)
++..||.+|+.|-.+|+.|..++..|+
T Consensus 2 RMnQLE~kVEeLl~~n~~Le~eV~rLk 28 (34)
T 2oxj_A 2 RMXQLEXKVXELLXKNXHLEXEVXRLK 28 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 456777777777777777766666554
No 28
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=89.51 E-value=6.8 Score=33.78 Aligned_cols=66 Identities=15% Similarity=0.023 Sum_probs=46.7
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 235 RARRMLSNRESARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIE 300 (308)
Q Consensus 235 R~RR~lsNReSArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~ 300 (308)
..+.+.+.+..-++.-......+.+-..-+..|..|...|..++..+.++...+..||..|-.+..
T Consensus 69 ~I~~L~~El~~l~~ki~dLeeel~eK~K~~e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~LV~RWM 134 (152)
T 3a7p_A 69 TLAILQKELKSKEQEIRRLKEVIALKNKNTERLNAALISGTIENNVLQQKLSDLKKEHSQLVARWL 134 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444433344445555556778889999999999999999999999999988866543
No 29
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=89.46 E-value=0.64 Score=31.13 Aligned_cols=30 Identities=13% Similarity=0.295 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 256 HLNELETQAGQLRAEHSSLLKGLTDVNQKY 285 (308)
Q Consensus 256 ~l~eLE~qV~~Le~EN~~L~~el~~L~qk~ 285 (308)
++..||.+|+.|..+|+.|..++..|+..+
T Consensus 2 RMnQLE~KVEeLl~~~~~Le~eV~RLk~ll 31 (36)
T 1kd8_B 2 KVKQLKAKVEELKSKLWHLKNKVARLKKKN 31 (36)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 577899999999999988888888776544
No 30
>2c9l_Y EB1, zebra, BZLF1 trans-activator protein; viral protein, epstein-BARR virus, EBV; 2.25A {Human herpesvirus 4} SCOP: h.1.3.1 PDB: 2c9n_Y
Probab=89.34 E-value=2.1 Score=31.38 Aligned_cols=38 Identities=26% Similarity=0.275 Sum_probs=29.0
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 239 MLSNRESARRSRRRKQAHLNELETQAGQLRAEHSSLLK 276 (308)
Q Consensus 239 ~lsNReSArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~ 276 (308)
.-+||.++|++|.|=+..|+....-...-..||..|+-
T Consensus 6 ryknr~asrk~rakfkn~lqh~r~vaaaks~en~rlr~ 43 (63)
T 2c9l_Y 6 RYKNRVAARKSRAKFKQLLQHYREVAAAKSSENDRLRL 43 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHH
Confidence 35699999999999888887777666666667766643
No 31
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=89.19 E-value=0.93 Score=43.98 Aligned_cols=55 Identities=15% Similarity=0.256 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 253 KQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 253 Kk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
.++.+..|+.++..|+.+...|..++.++++++...+..-+.|..+++.|+..|+
T Consensus 8 ~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~rr~l~n~~~elkgnIr 62 (403)
T 4etp_A 8 LKEKIAALKEKIAALKEKIKDTELGMKELNEILIKEETVRRTLHNELQELRGNIR 62 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeE
Confidence 4577889999999999999999999999999999999999999999999987664
No 32
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=89.01 E-value=3.1 Score=45.24 Aligned_cols=26 Identities=27% Similarity=0.363 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 280 DVNQKYDESAVNNRILKADIETLRAK 305 (308)
Q Consensus 280 ~L~qk~~~l~~ENr~Lra~l~~Lrak 305 (308)
+|+++...|..||..|++++..|...
T Consensus 1020 ~L~~kv~~L~~e~~~L~qq~~~l~~~ 1045 (1080)
T 2dfs_A 1020 ETEQLVSELKEQNTLLKTEKEELNRR 1045 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456667778888888888887743
No 33
>1p9i_A Cortexillin I/GCN4 hybrid peptide; coiled-coil, unknown function; 1.17A {Synthetic} SCOP: h.1.10.1
Probab=88.78 E-value=0.51 Score=30.08 Aligned_cols=26 Identities=35% Similarity=0.285 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 282 NQKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 282 ~qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
+.-+..++.||+.|++++++|-+||.
T Consensus 5 nallasleaenkqlkakveellakvg 30 (31)
T 1p9i_A 5 NALLASLEAENKQLKAKVEELLAKVG 30 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34456788999999999999988874
No 34
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=88.44 E-value=1.1 Score=34.72 Aligned_cols=44 Identities=14% Similarity=0.270 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 259 ELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETL 302 (308)
Q Consensus 259 eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~L 302 (308)
++..+++.++.+|..|..++..|++.+..-..+-..++.++..|
T Consensus 10 ~~~~klq~~E~rN~~Le~~v~~le~~Le~s~~~q~~~~~Elk~l 53 (79)
T 3cvf_A 10 ETQQKVQDLETRNAELEHQLRAMERSLEEARAERERARAEVGRA 53 (79)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555555555555555555555554444444444444433
No 35
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=88.33 E-value=1.2 Score=34.07 Aligned_cols=50 Identities=28% Similarity=0.250 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRA 304 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lra 304 (308)
++|.+||.++..++.-...|...+..-++++..|..+-+.|..++..+..
T Consensus 14 ~Ri~~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~rl~~~~~ 63 (78)
T 3efg_A 14 ARLVELETRLSFQEQALTELSEALADARLTGARNAELIRHLLEDLGKVRS 63 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 56788888888888888888888888888888888777777777766553
No 36
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=88.30 E-value=0.73 Score=34.89 Aligned_cols=33 Identities=12% Similarity=0.236 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 274 LLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 274 L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
|..++..|......+..||..|+.++..|+..+
T Consensus 34 LE~~v~~le~~~~~l~~en~~Lr~~i~~L~~El 66 (70)
T 1gd2_E 34 LETQVVTLKELHSSTTLENDQLRQKVRQLEEEL 66 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444455556777777777777777655
No 37
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=87.54 E-value=8 Score=30.56 Aligned_cols=54 Identities=13% Similarity=0.157 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 253 KQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 253 Kk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
+-..+..|..++..|+.+...+..+|...+.++......-..-..++..|.+||
T Consensus 42 ~E~Ei~sL~kk~~~lE~eld~~ee~L~ea~~kLee~ek~~~~aE~ev~~L~Rri 95 (101)
T 3u1c_A 42 LEDDIVQLEKQLRVTEDSRDQVLEELHKSEDSLLFAEENAAKAESEVASLNRRI 95 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444444444333333333222222233555555554
No 38
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=87.48 E-value=2.6 Score=29.95 Aligned_cols=39 Identities=15% Similarity=0.109 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 261 ETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADI 299 (308)
Q Consensus 261 E~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l 299 (308)
|.++..|+.-|..|..+++.|+..|..++.|+..|++=+
T Consensus 3 eq~l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~~LL 41 (48)
T 3vmx_A 3 ERQILRLKQINIQLATKIQHLEFSCSEKEQEIERLNKLL 41 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 578888999999999999999999999988888777644
No 39
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=87.05 E-value=3.3 Score=34.43 Aligned_cols=36 Identities=22% Similarity=0.335 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 264 AGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADI 299 (308)
Q Consensus 264 V~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l 299 (308)
|+.|+.|+..|..+|.+...+...|..+|..|..+|
T Consensus 73 vqeLqgEI~~Lnq~Lq~a~ae~erlr~~~~~~~~r~ 108 (121)
T 3mq7_A 73 VEELEGEITTLNHKLQDASAEVERLRRENQVLSVRI 108 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhHh
Confidence 444555555554555444444444555554444443
No 40
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=86.88 E-value=0.88 Score=30.11 Aligned_cols=28 Identities=4% Similarity=0.077 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 256 HLNELETQAGQLRAEHSSLLKGLTDVNQ 283 (308)
Q Consensus 256 ~l~eLE~qV~~Le~EN~~L~~el~~L~q 283 (308)
++..||.+|+.|-.+|..|..++..|+.
T Consensus 2 RMnQLEdKVEeLl~~~~~Le~EV~RLk~ 29 (34)
T 3c3f_A 2 RMXQIEXKLEXILSXLYHXENEXARIXK 29 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 4677888888877777777777766553
No 41
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=86.81 E-value=4.4 Score=29.08 Aligned_cols=34 Identities=12% Similarity=-0.026 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 264 AGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKA 297 (308)
Q Consensus 264 V~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra 297 (308)
+..|+.+...|..++..|..++..|..|+..|+.
T Consensus 24 ~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk~ 57 (61)
T 1t2k_D 24 VQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQ 57 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444444444444444444443
No 42
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=86.77 E-value=0.83 Score=30.58 Aligned_cols=30 Identities=13% Similarity=0.283 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 256 HLNELETQAGQLRAEHSSLLKGLTDVNQKY 285 (308)
Q Consensus 256 ~l~eLE~qV~~Le~EN~~L~~el~~L~qk~ 285 (308)
++..||.+|+.|..+|+.|..++..|+.-+
T Consensus 2 RMnQLE~kVEeLl~~~~~Le~EV~RL~~ll 31 (36)
T 1kd8_A 2 EVKQLEAEVEEIESEVWHLENEVARLEKEN 31 (36)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 467889999999999998888888776544
No 43
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=86.74 E-value=11 Score=30.79 Aligned_cols=51 Identities=22% Similarity=0.234 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 257 LNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 257 l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
+..|+.++..|+..|..|...+.+|.+....|+...|..-.-++.+..|++
T Consensus 37 ~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k~n 87 (111)
T 2v66_B 37 VSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLN 87 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHHHH
Confidence 566778888888888888888888888888888888777777777776653
No 44
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=86.53 E-value=1.3 Score=43.11 Aligned_cols=53 Identities=13% Similarity=0.149 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
..+.+|..++..|+.++..+..++..+.+++.....+.+.|..+++.|+..|+
T Consensus 10 ~el~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~rr~l~n~~~~l~gnIr 62 (412)
T 3u06_A 10 TEVVHLRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRDNIR 62 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 56788888888999999999999999999999999999999999999987654
No 45
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=86.47 E-value=9.6 Score=33.82 Aligned_cols=51 Identities=22% Similarity=0.229 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 257 LNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 257 l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
+..|+.++..|+..+..|..++..|.+....+....|.+..-++.+..|++
T Consensus 90 ~~~Lq~el~~l~~~~~~l~~~ireLEq~NDdlEr~~R~~~~SleD~e~kln 140 (189)
T 2v71_A 90 VSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIMSLEDFEQRLN 140 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHHHH
Confidence 677788888888888888888888888888888888888888888777653
No 46
>3a7o_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.50A {Saccharomyces cerevisiae}
Probab=86.46 E-value=2.9 Score=32.03 Aligned_cols=50 Identities=16% Similarity=0.253 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRA 304 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lra 304 (308)
.+|..-+.++..|+...+--.+-.+.|+-++-.+..||..|+.++..|++
T Consensus 25 ~eL~~Ke~eI~~L~e~i~lk~kd~ErLNDEiislNIENNlL~~rl~~l~~ 74 (75)
T 3a7o_A 25 KELKSKEQEIRRLKEVIALKNKNTERLNDELISGTIENNVLQQKLSDLKK 74 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHhhHHHHHhHHHHHHHHHHHHHHhc
Confidence 45555566666776666655666778888899999999999999988875
No 47
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=86.39 E-value=7.1 Score=34.11 Aligned_cols=63 Identities=16% Similarity=0.221 Sum_probs=38.5
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 234 KRARRMLSNRESARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLR 303 (308)
Q Consensus 234 KR~RR~lsNReSArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lr 303 (308)
|-...+..-=+.=|+.|.+-.+.+.+|+.++..|+.|...++..+ ..+.++|+.|...|..|.
T Consensus 69 ke~~~LQa~L~qEr~~r~q~se~~~elq~ri~~L~~El~~~k~~~-------~k~~~e~r~L~Ekl~~lE 131 (168)
T 3o0z_A 69 KDYYQLQAILEAERRDRGHDSEMIGDLQARITSLQEEVKHLKHNL-------EKVEGERKEAQDMLNHSE 131 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHH
Confidence 334445555566677777777777788877777776666655443 345555555555554443
No 48
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=86.38 E-value=3.2 Score=31.73 Aligned_cols=50 Identities=18% Similarity=0.130 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 258 NELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 258 ~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
.+|+.++..|+...+-+-..+..|++....-..+-..|+.++..|..|++
T Consensus 10 ~~le~Ri~~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~rl~ 59 (78)
T 3efg_A 10 QELEARLVELETRLSFQEQALTELSEALADARLTGARNAELIRHLLEDLG 59 (78)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46777888888888888888888888888888888888888888877764
No 49
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=86.31 E-value=2 Score=31.41 Aligned_cols=39 Identities=15% Similarity=0.114 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 261 ETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADI 299 (308)
Q Consensus 261 E~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l 299 (308)
|.++..|+.-|-+|..++..|..+|...+.|+..|.+=+
T Consensus 10 e~q~~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL~~LL 48 (58)
T 3a2a_A 10 ERQLLRLKQMNVQLAAKIQHLEFSCSEKEQEIERLNKLL 48 (58)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567777888888888888888888888888887776544
No 50
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=86.27 E-value=4 Score=28.63 Aligned_cols=45 Identities=18% Similarity=0.299 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 259 ELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 259 eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
+||.+|..|+.--..|..++..|-.+|.. -...||++|..|..+|
T Consensus 2 dlEekv~~Le~~ld~LqTr~ArLlae~~s---sq~KlKqRit~lE~~v 46 (46)
T 3swy_A 2 ALEEKVEQLGSSLDTLQTRFARLLAEYNA---TQMKMKQRLSQLESQV 46 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcC
Confidence 57788888877777777777666555544 3567899999988775
No 51
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=85.63 E-value=1.2 Score=32.71 Aligned_cols=31 Identities=16% Similarity=0.277 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 276 KGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 276 ~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
.++..|..+...|..+|..|+.++..|+..|
T Consensus 30 ~~~~~Le~~v~~L~~eN~~L~~ev~~Lr~~l 60 (63)
T 2dgc_A 30 QRMKQLEDKVEELLSKNYHLENEVARLKKLV 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566777777788888888888888888765
No 52
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=85.40 E-value=1.2 Score=29.36 Aligned_cols=27 Identities=7% Similarity=0.187 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 257 LNELETQAGQLRAEHSSLLKGLTDVNQ 283 (308)
Q Consensus 257 l~eLE~qV~~Le~EN~~L~~el~~L~q 283 (308)
+..||.+|+.|-.+|..|..++..|+.
T Consensus 2 MnQLEdKvEeLl~~~~~Le~EV~RLk~ 28 (33)
T 3c3g_A 2 MKXIEXKLXEIXSKXYHXENXLARIKX 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 566777888777777777777665543
No 53
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=85.24 E-value=1.1 Score=29.70 Aligned_cols=28 Identities=7% Similarity=0.285 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 256 HLNELETQAGQLRAEHSSLLKGLTDVNQ 283 (308)
Q Consensus 256 ~l~eLE~qV~~Le~EN~~L~~el~~L~q 283 (308)
++..||.+|+.|-.+|..|..++..|+.
T Consensus 2 RM~QLEdKVEeLl~~n~~Le~EV~RLk~ 29 (34)
T 1uo4_A 2 RMKQIEDKGEEILSKLYHIENELARIKK 29 (34)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4567888888888888888877776654
No 54
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=85.15 E-value=11 Score=29.02 Aligned_cols=52 Identities=21% Similarity=0.271 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
....+|+.+...|..+...|..++.++...+..|......|..+|..|..+|
T Consensus 35 ~~rkele~~~~~l~~ek~~L~~ql~eaEe~~~~L~~~K~eLE~~l~el~~rl 86 (89)
T 3bas_A 35 RIKKELEEQNVTLLEQKNDLFGSMKQLEDKVEELLSKNYHLENEVARLKKLV 86 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4457899999999999999999999999999999999999999999999887
No 55
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=84.90 E-value=1.2 Score=29.55 Aligned_cols=28 Identities=11% Similarity=0.269 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 256 HLNELETQAGQLRAEHSSLLKGLTDVNQ 283 (308)
Q Consensus 256 ~l~eLE~qV~~Le~EN~~L~~el~~L~q 283 (308)
++..||.+|+.|-.+|..|..++..|+.
T Consensus 2 RMnQLEdkVEeLl~~~~~Le~eV~RL~~ 29 (34)
T 2hy6_A 2 KVKQLADAVEELASANYHLANAVARLAK 29 (34)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4677888888888888888877776654
No 56
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=84.84 E-value=4.3 Score=28.96 Aligned_cols=39 Identities=23% Similarity=0.437 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 257 LNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETL 302 (308)
Q Consensus 257 l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~L 302 (308)
+.+|..++..|...|..|...+.. ...+=..|+.+|+.|
T Consensus 11 ~~~l~~~l~~L~~rN~rL~~~L~~-------AR~el~~Lkeele~L 49 (51)
T 3m91_A 11 IHQLEARIDSLAARNSKLMETLKE-------ARQQLLALREEVDRL 49 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHh
Confidence 345555666666566555555554 444444555555555
No 57
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=84.76 E-value=5.5 Score=30.80 Aligned_cols=46 Identities=22% Similarity=0.363 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 259 ELETQAGQLRAEHSSLLKGL-------TDVNQKYDESAVNNRILKADIETLRA 304 (308)
Q Consensus 259 eLE~qV~~Le~EN~~L~~el-------~~L~qk~~~l~~ENr~Lra~l~~Lra 304 (308)
.+-.+|+.|..||.+|...- .+|-.+...|.+|+..|+.++..++.
T Consensus 6 gmgkevEnLi~EN~eLl~TKNaLnvvk~DLI~rvdELt~E~e~l~~El~s~~~ 58 (77)
T 2w83_C 6 FMGREVENLILENTQLLETKNALNIVKNDLIAKVDELTCEKDVLQGELEAVKQ 58 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34455666666666655432 24456666677777777766666543
No 58
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=84.55 E-value=3.8 Score=31.82 Aligned_cols=45 Identities=13% Similarity=0.217 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 256 HLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIE 300 (308)
Q Consensus 256 ~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~ 300 (308)
-+-+|..++..|+.|...|+-+++.+..++..+....+.+-.++.
T Consensus 21 ~~~~Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQrd~Y~dLD 65 (83)
T 2xdj_A 21 LLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQID 65 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677777777777777777777777777777666666665554
No 59
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=84.53 E-value=1.2 Score=29.45 Aligned_cols=28 Identities=7% Similarity=0.306 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 256 HLNELETQAGQLRAEHSSLLKGLTDVNQ 283 (308)
Q Consensus 256 ~l~eLE~qV~~Le~EN~~L~~el~~L~q 283 (308)
++..||.+|+.|-.+|..|..++..|+.
T Consensus 2 RMnQLEdKvEeLl~~~~~L~~EV~RLk~ 29 (34)
T 2bni_A 2 RMKQIEDKLEEILSKGHHICNELARIKK 29 (34)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 4677888888888888887777776654
No 60
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=84.51 E-value=1.7 Score=31.14 Aligned_cols=32 Identities=22% Similarity=0.256 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 262 TQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIE 300 (308)
Q Consensus 262 ~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~ 300 (308)
..|+.|+.||..|+.++. .|..+|..|+++++
T Consensus 19 ~d~eaLk~E~~eLk~k~~-------~L~~~~~el~~~l~ 50 (53)
T 2yy0_A 19 PEIELLRLELAEMKEKYE-------AIVEENKKLKAKLA 50 (53)
T ss_dssp HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHh
Confidence 445555555555554444 45555555555543
No 61
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=84.20 E-value=2.7 Score=32.28 Aligned_cols=47 Identities=13% Similarity=0.169 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 258 NELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 258 ~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
++||.+|..|+.-...|..++..|--+|.. -...||++|..|..+|+
T Consensus 3 ~dlEEKv~~LE~sld~LQTrfARLLaEy~s---sQ~KLKqRit~LE~~~~ 49 (74)
T 3swf_A 3 MGLEEKVTRMESSVDLLQTRFARILAEYES---MQQKLKQRLTKVEKFLK 49 (74)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhc
Confidence 467777777777777777777666555544 34678888888888775
No 62
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=83.96 E-value=1.7 Score=31.16 Aligned_cols=32 Identities=9% Similarity=0.141 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 276 KGLTDVNQKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 276 ~el~~L~qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
..+..|..+...|..||..|+.++..|+..+.
T Consensus 22 ~~~~~LE~~v~~L~~eN~~L~~~~~~L~~~~~ 53 (55)
T 1dh3_A 22 EYVKSLENRVAVLENQNKTLIEELKALKDLYS 53 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTST
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45677788888999999999999999988763
No 63
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=83.59 E-value=6.6 Score=30.80 Aligned_cols=27 Identities=7% Similarity=0.263 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 277 GLTDVNQKYDESAVNNRILKADIETLR 303 (308)
Q Consensus 277 el~~L~qk~~~l~~ENr~Lra~l~~Lr 303 (308)
.+..|+.++..+..+|..|..++..|+
T Consensus 57 ~i~~Lr~~i~~~~~ek~~l~~e~dnl~ 83 (93)
T 3s4r_A 57 EMRELRRQVDQLTNDKARVEVERDNLA 83 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444555555555444444443
No 64
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=83.53 E-value=1.4 Score=33.39 Aligned_cols=22 Identities=5% Similarity=0.107 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLK 276 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~ 276 (308)
.||..|+.++..|+.+...|..
T Consensus 47 ~YI~~L~~~~~~l~~e~~~L~~ 68 (83)
T 1nkp_B 47 EYIQYMRRKNHTHQQDIDDLKR 68 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444333333
No 65
>2kz5_A Transcription factor NF-E2 45 kDa subunit; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=83.51 E-value=0.094 Score=41.78 Aligned_cols=24 Identities=29% Similarity=0.277 Sum_probs=21.2
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHH
Q 021757 232 DDKRARRMLSNRESARRSRRRKQA 255 (308)
Q Consensus 232 e~KR~RR~lsNReSArRSR~RKk~ 255 (308)
-.|..||..+||++|+++|+||..
T Consensus 64 lIrdiRRRgKNKvAAqnCRKRKld 87 (91)
T 2kz5_A 64 LVRDIRRRGKNKVAAQNYRKRKLE 87 (91)
T ss_dssp HHHHHHHHHHHHHHTTSCCCCCCC
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHH
Confidence 568889999999999999999853
No 66
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=83.37 E-value=15 Score=28.85 Aligned_cols=9 Identities=11% Similarity=0.431 Sum_probs=4.6
Q ss_pred HHHHHHHHh
Q 021757 298 DIETLRAKK 306 (308)
Q Consensus 298 ~l~~Lrakv 306 (308)
++..|.+||
T Consensus 87 evasLnRri 95 (101)
T 3u59_A 87 EVASLNRRI 95 (101)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 455555554
No 67
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=83.10 E-value=1.7 Score=28.60 Aligned_cols=27 Identities=7% Similarity=0.100 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 257 LNELETQAGQLRAEHSSLLKGLTDVNQ 283 (308)
Q Consensus 257 l~eLE~qV~~Le~EN~~L~~el~~L~q 283 (308)
+..||.+|+.|-.+|..|..++..|+.
T Consensus 2 MnQLEdKVEell~~~~~le~EV~Rl~~ 28 (33)
T 2wq1_A 2 MKQLEDKIEENTSKIYHNTNEIARNTK 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 567888888888888777777766543
No 68
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=83.06 E-value=1.4 Score=40.82 Aligned_cols=43 Identities=21% Similarity=0.256 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 254 QAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILK 296 (308)
Q Consensus 254 k~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lr 296 (308)
...+.+|+.++..|...|..|...+..+++++..|..|+..|+
T Consensus 53 ~~~l~eL~~ql~~L~arNe~L~~~Lk~ar~El~~LkeElerL~ 95 (251)
T 3m9b_A 53 ARDIHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDRLG 95 (251)
T ss_dssp CHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3446677777888877777777777776666666666666654
No 69
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=83.05 E-value=6.1 Score=32.84 Aligned_cols=49 Identities=16% Similarity=0.256 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 258 NELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 258 ~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
..|+.+..+-+.....|..+|..|+++++.+..|=..||.+.+.|..++
T Consensus 60 ~SL~~ekaq~q~~vqeLqgEI~~Lnq~Lq~a~ae~erlr~~~~~~~~r~ 108 (121)
T 3mq7_A 60 ASLDAEKAQGQKKVEELEGEITTLNHKLQDASAEVERLRRENQVLSVRI 108 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhHh
Confidence 4455555555667888999999999999999999999999999888775
No 70
>2ve7_C Kinetochore protein NUF2, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_D*
Probab=82.92 E-value=1.1 Score=41.06 Aligned_cols=75 Identities=20% Similarity=0.149 Sum_probs=37.5
Q ss_pred HHHHHHHHHHhhHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 232 DDKRARRMLSNRESARRSRR-------RKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRA 304 (308)
Q Consensus 232 e~KR~RR~lsNReSArRSR~-------RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lra 304 (308)
+.||.+|.++-=.==-|.|. ......+++..++++|+.||+.|..++..|+.+.....++---.+..+..|.+
T Consensus 118 ~~~Rt~~iLSalINF~~FRE~~~~~~~e~~~~~e~~~~~i~ql~~En~~le~~Ie~Lk~e~~e~~te~~p~~k~~~qly~ 197 (250)
T 2ve7_C 118 KAKRTSRFLSGIINFIHFREACRETYMEFLWQYKSSADKMQQLNAAHQEALMKLERLEKEVDEDTTVTIPSAVYVAQLYH 197 (250)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHSCC-------------CTTTHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHH
Confidence 47899998765333333443 44445556666677777777777777777766665555443333455555555
Q ss_pred Hh
Q 021757 305 KK 306 (308)
Q Consensus 305 kv 306 (308)
+|
T Consensus 198 ~v 199 (250)
T 2ve7_C 198 QV 199 (250)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 71
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=82.63 E-value=2 Score=28.38 Aligned_cols=30 Identities=17% Similarity=0.239 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 278 LTDVNQKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 278 l~~L~qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
...|..+...|..+|..|..++..|+..|.
T Consensus 3 MnQLE~kVEeLl~~n~~Le~eV~rLk~ll~ 32 (34)
T 2oxj_A 3 MXQLEXKVXELLXKNXHLEXEVXRLKXLVX 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHh
Confidence 455667777888888888888888887664
No 72
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=82.01 E-value=6.3 Score=34.99 Aligned_cols=34 Identities=15% Similarity=0.018 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 264 AGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKA 297 (308)
Q Consensus 264 V~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra 297 (308)
+..|+.+...|......|..++..|+..|..|..
T Consensus 90 ~~~Lq~el~~l~~~~~~l~~~ireLEq~NDdlEr 123 (189)
T 2v71_A 90 VSVLEDDLSQTRAIKEQLHKYVRELEQANDDLER 123 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 4444444444444444444444444444444433
No 73
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=81.90 E-value=6.7 Score=31.74 Aligned_cols=31 Identities=35% Similarity=0.374 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 254 QAHLNELETQAGQLRAEHSSLLKGLTDVNQK 284 (308)
Q Consensus 254 k~~l~eLE~qV~~Le~EN~~L~~el~~L~qk 284 (308)
-..+.+|+.+|..|+.||+.|+.+.....++
T Consensus 64 ~~~v~eLe~everL~~ENq~L~~e~~~~~~~ 94 (104)
T 3s9g_A 64 DARVRELELELDRLRAENLQLLTENELHRQQ 94 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4678899999999999999998887765543
No 74
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=81.81 E-value=1.9 Score=28.35 Aligned_cols=29 Identities=17% Similarity=0.187 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 279 TDVNQKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 279 ~~L~qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
..|..+...|..+|..|..++..|+..|+
T Consensus 3 ~QLE~kVEeLl~~n~~Le~EV~RLk~Ll~ 31 (33)
T 3m48_A 3 AQLEAKVEELLSKNWNLENEVARLKKLVG 31 (33)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHhHHHHHHHHHHHHHhh
Confidence 45677788888999999999999988764
No 75
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=81.64 E-value=10 Score=31.22 Aligned_cols=48 Identities=19% Similarity=0.335 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 251 RRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAK 305 (308)
Q Consensus 251 ~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrak 305 (308)
..-+.++..|+.+|..|+ .+|..-+...+.+..||..|+.+++.|+.+
T Consensus 36 ~E~q~~v~ql~~~i~~Le-------~eL~e~r~~~q~a~~e~e~Lr~e~~~l~~~ 83 (120)
T 3i00_A 36 TESQRVVLQLKGHVSELE-------ADLAEQQHLRQQAADDCEFLRAELDELRRQ 83 (120)
T ss_dssp HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333445555555555555 444555555677889999999999988653
No 76
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=81.46 E-value=1.8 Score=31.69 Aligned_cols=28 Identities=18% Similarity=0.228 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 278 LTDVNQKYDESAVNNRILKADIETLRAK 305 (308)
Q Consensus 278 l~~L~qk~~~l~~ENr~Lra~l~~Lrak 305 (308)
...|..+...|..+|..|+.+|..|+..
T Consensus 25 ~~~le~~~~~L~~~N~~L~~~i~~L~~E 52 (63)
T 1ci6_A 25 QEALTGECKELEKKNEALKERADSLAKE 52 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444555555555555544443
No 77
>1t6f_A Geminin; coiled-coil, cell cycle; 1.47A {Synthetic} SCOP: h.1.28.1
Probab=81.43 E-value=2.9 Score=28.03 Aligned_cols=29 Identities=17% Similarity=0.192 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 268 RAEHSSLLKGLTDVNQKYDESAVNNRILK 296 (308)
Q Consensus 268 e~EN~~L~~el~~L~qk~~~l~~ENr~Lr 296 (308)
-.||..|.+.++.-.+++..|..+|..|+
T Consensus 6 L~ENekLhk~ie~KdeeIa~Lk~eN~eL~ 34 (37)
T 1t6f_A 6 LKENEKLHKEIEQKDNEIARLKKENKELA 34 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 46899999999999999999999998886
No 78
>2oa5_A Hypothetical protein BQLF2; MHR28B, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: PE5; 2.10A {Murid herpesvirus 4} SCOP: d.362.1.1 PDB: 2h3r_A*
Probab=81.29 E-value=4.5 Score=33.19 Aligned_cols=25 Identities=16% Similarity=0.313 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLT 279 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~ 279 (308)
.-+++|..++..|+.||..|++++.
T Consensus 8 ~t~EeLaaeL~kLqmENK~LKkkl~ 32 (110)
T 2oa5_A 8 KTYEEMVKEVERLKLENKTLKQKVK 32 (110)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3479999999999999999999886
No 79
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=81.15 E-value=12 Score=26.91 Aligned_cols=28 Identities=18% Similarity=0.283 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 278 LTDVNQKYDESAVNNRILKADIETLRAK 305 (308)
Q Consensus 278 l~~L~qk~~~l~~ENr~Lra~l~~Lrak 305 (308)
+..|..++..|..+|..|+.++..|+..
T Consensus 24 ~~~Le~~v~~L~~~n~~L~~~v~~L~~e 51 (62)
T 1jnm_A 24 IARLEEKVKTLKAQNSELASTANMLREQ 51 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444445555555555555555443
No 80
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=81.14 E-value=11 Score=28.89 Aligned_cols=53 Identities=21% Similarity=0.355 Sum_probs=36.6
Q ss_pred HHHHHHHHHhhHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 233 DKRARRMLSNRESARRSRRR---KQAHLNELETQAGQLRAEHSSLLKGLTDVNQKY 285 (308)
Q Consensus 233 ~KR~RR~lsNReSArRSR~R---Kk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~ 285 (308)
.||.|=-++=|-|-...|.| -+..+.+|+.+-..|+.+...|..++..|.+-+
T Consensus 18 ~rR~rNN~AakrSR~krk~r~~e~~~r~~~L~~eN~~L~~~v~~L~~E~~~Lr~ll 73 (78)
T 1gu4_A 18 IRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLF 73 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555455544454444444 345678888899999999999999888887654
No 81
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=80.80 E-value=3 Score=29.76 Aligned_cols=14 Identities=7% Similarity=0.147 Sum_probs=5.0
Q ss_pred HHHHHHHHHHHHHH
Q 021757 290 VNNRILKADIETLR 303 (308)
Q Consensus 290 ~ENr~Lra~l~~Lr 303 (308)
.++..|+++++.|+
T Consensus 33 ~k~~~L~~~~~el~ 46 (53)
T 2yy0_A 33 EKYEAIVEENKKLK 46 (53)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33333333333333
No 82
>1gk6_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, leucine zipper, fusion protein; 1.9A {Saccharomyces cerevisiae} SCOP: h.1.20.1
Probab=80.07 E-value=6.6 Score=28.28 Aligned_cols=50 Identities=16% Similarity=0.197 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 257 LNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 257 l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
+.++...+..|+.+...++..+....++|+.|.+=--.|-.+|.+.|..+
T Consensus 2 l~~~q~~i~~le~el~~~r~e~~~q~~eYq~LlniK~~Le~EIatYRkLL 51 (59)
T 1gk6_A 2 MKQLEDKVEELLSKNYHLENEVARLKKLVGDLLNVKMALDIEIATYRKLL 51 (59)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 34667778888888888888888888888889888888889998887654
No 83
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=80.06 E-value=5.7 Score=34.25 Aligned_cols=25 Identities=16% Similarity=0.331 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 278 LTDVNQKYDESAVNNRILKADIETL 302 (308)
Q Consensus 278 l~~L~qk~~~l~~ENr~Lra~l~~L 302 (308)
++.++.++..|..++..|..++..|
T Consensus 98 ~e~l~DEl~aLqlq~n~lE~kl~kL 122 (152)
T 3a7p_A 98 TERLNAALISGTIENNVLQQKLSDL 122 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444444444443333
No 84
>2zxx_A Geminin; coiled-coil, cell cycle, coiled coil, DNA replication inhibitor, phosphoprotein, DNA-binding, nucleus, proto-oncogene; HET: DNA; 2.80A {Mus musculus}
Probab=79.97 E-value=6.7 Score=30.40 Aligned_cols=37 Identities=16% Similarity=0.148 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 269 AEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAK 305 (308)
Q Consensus 269 ~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrak 305 (308)
.||..|..++..++..+..|..||+.|+.-+...+..
T Consensus 34 ~EN~~Lh~~ie~~~eEi~~LkeEN~~L~el~~~~~~l 70 (79)
T 2zxx_A 34 KENEKLHKEIEQKDSEIARLRKENKDLAEVAEHVQYM 70 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788899999999999999999999887766665543
No 85
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=79.92 E-value=13 Score=40.40 Aligned_cols=32 Identities=16% Similarity=0.243 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYD 286 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~ 286 (308)
+..++|+.+|..|+.||+.|..++.+|+....
T Consensus 1016 ~~~~~L~~kv~~L~~e~~~L~qq~~~l~~~~~ 1047 (1080)
T 2dfs_A 1016 KYKHETEQLVSELKEQNTLLKTEKEELNRRIH 1047 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34467778888888888888888887774333
No 86
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=79.67 E-value=2.8 Score=27.81 Aligned_cols=29 Identities=17% Similarity=0.277 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 274 LLKGLTDVNQKYDESAVNNRILKADIETL 302 (308)
Q Consensus 274 L~~el~~L~qk~~~l~~ENr~Lra~l~~L 302 (308)
++.++...++....+..+|..|..++..|
T Consensus 5 mRrKn~a~qqDIddlkrQN~~Le~Qir~l 33 (34)
T 1a93_B 5 MRRKNDTHQQDIDDLKRQNALLEQQVRAL 33 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HhhhhHhhHhhHHHHHHHHHHHHHHHHhc
Confidence 34555555666666777777777777665
No 87
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=79.53 E-value=15 Score=29.01 Aligned_cols=56 Identities=18% Similarity=0.258 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 247 RRSRRRKQAHLNELE----TQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETL 302 (308)
Q Consensus 247 rRSR~RKk~~l~eLE----~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~L 302 (308)
+|-+.|-.-|...=. .++..|+.++..|..++..|.++...+..|-..+++.++.|
T Consensus 29 ~RRtlKNRgyAq~CR~Kr~~q~~~LE~e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~~L 88 (90)
T 2wt7_B 29 KRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKSEKL 88 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455666666654432 34566777777777777766666666666666666665554
No 88
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=79.20 E-value=22 Score=33.95 Aligned_cols=55 Identities=13% Similarity=0.084 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 249 SRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLR 303 (308)
Q Consensus 249 SR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lr 303 (308)
-|.|.+++++....+++.|+.||+.|.+.+..+..+...+...=..+..+-+.|.
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (487)
T 3oja_A 429 VQNNAIRDWDMYQHKETQLAEENARLKKLNGEADLALASANATLQELVVREQNLA 483 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhcchhhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhHhcccHHHHHHHHHHHHH
Confidence 4445555666666666666666666666666555555444444444444434343
No 89
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=78.88 E-value=5.3 Score=36.03 Aligned_cols=39 Identities=15% Similarity=0.134 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 268 RAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 268 e~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
-.||..|..++..+..++..|..+|..|+.-++.++..+
T Consensus 114 LeEN~~Lh~~ie~l~eEi~~LkeEn~eLkeLae~~q~la 152 (209)
T 2wvr_A 114 LKENEKLHKEIEQKDNEIARLKKENKELAEVAEHVQYMA 152 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 347888888888888888888888888887777666543
No 90
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=78.83 E-value=13 Score=29.01 Aligned_cols=36 Identities=17% Similarity=0.182 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 268 RAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLR 303 (308)
Q Consensus 268 e~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lr 303 (308)
-.||..|..++..+..+...+..+|..|+.-++.++
T Consensus 45 L~EN~~Lh~~ie~l~eEi~~lk~en~eL~elae~~q 80 (83)
T 1uii_A 45 LKENEKLHKEIEQKDNEIARLKKENKELAEVAEHVQ 80 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357888888888888888888888888877666554
No 91
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=78.73 E-value=4 Score=31.18 Aligned_cols=31 Identities=13% Similarity=0.242 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKY 285 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~ 285 (308)
.|+..|+.+...|..++..|..++..|++++
T Consensus 47 ~yI~~L~~~~~~l~~e~~~L~~e~~~L~~~L 77 (80)
T 1nlw_A 47 LHIKKLEDSDRKAVHQIDQLQREQRHLKRQL 77 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666666666666655555555444443
No 92
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=78.71 E-value=16 Score=26.37 Aligned_cols=28 Identities=14% Similarity=0.220 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 278 LTDVNQKYDESAVNNRILKADIETLRAK 305 (308)
Q Consensus 278 l~~L~qk~~~l~~ENr~Lra~l~~Lrak 305 (308)
+..|..++..|..+|..|+.+|..|+..
T Consensus 25 ~~~Le~~v~~L~~~n~~L~~ei~~L~~e 52 (63)
T 2wt7_A 25 TDTLQAETDQLEDEKSALQTEIANLLKE 52 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555555555555555555543
No 93
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=78.67 E-value=19 Score=27.58 Aligned_cols=53 Identities=11% Similarity=0.075 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 254 QAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 254 k~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
...+..+...+..|+.+...++..+....+.|+.|..=--.|-.+|.+.|..+
T Consensus 27 ~~~l~~~q~~i~~lE~el~~~r~e~~~ql~EYq~LlnvK~~Le~EIatYRkLL 79 (86)
T 1x8y_A 27 ARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 79 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 44667788888888888889999999888999999988888999999888654
No 94
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=78.39 E-value=7.2 Score=38.06 Aligned_cols=26 Identities=15% Similarity=0.282 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 280 DVNQKYDESAVNNRILKADIETLRAK 305 (308)
Q Consensus 280 ~L~qk~~~l~~ENr~Lra~l~~Lrak 305 (308)
.+++++......-..|++++..++++
T Consensus 548 ~le~~~~~~~~~~~~l~~e~~~~~~~ 573 (597)
T 3oja_B 548 ALEKQLDNKRAKQAELRQETSLKRQK 573 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 33333333333333444444444433
No 95
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=78.19 E-value=2.3 Score=39.44 Aligned_cols=44 Identities=18% Similarity=0.201 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 261 ETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRA 304 (308)
Q Consensus 261 E~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lra 304 (308)
+.++..|+.++..|..++..|...+..+..|...||.+++.|+.
T Consensus 53 ~~~l~eL~~ql~~L~arNe~L~~~Lk~ar~El~~LkeElerL~s 96 (251)
T 3m9b_A 53 ARDIHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDRLGQ 96 (251)
T ss_dssp CHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 66788888899999888888888888999999999988888863
No 96
>1fmh_A General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_A
Probab=77.93 E-value=4.5 Score=26.06 Aligned_cols=28 Identities=21% Similarity=0.369 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 257 LNELETQAGQLRAEHSSLLKGLTDVNQK 284 (308)
Q Consensus 257 l~eLE~qV~~Le~EN~~L~~el~~L~qk 284 (308)
+..||.+|.+.+.||-.|..++..|..+
T Consensus 3 vaqlekevaqaeaenyqleqevaqlehe 30 (33)
T 1fmh_A 3 VAQLEKEVAQAEAENYQLEQEVAQLEHE 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 3456666666666666666666555443
No 97
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=77.57 E-value=11 Score=30.51 Aligned_cols=74 Identities=15% Similarity=0.280 Sum_probs=39.1
Q ss_pred chHHHHHHHHHHhhHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 230 SVDDKRARRMLSNRESARRSRRRKQ--AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 230 ~~e~KR~RR~lsNReSArRSR~RKk--~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
..++|=.|-|++| ||.=-.|-. =.++-|.-++..++.....|.+++.+..+.+..+......|+.++..|+..|
T Consensus 6 EvEEKyrKAMVsn---AQLDNEKsal~YqVdlLKD~LEe~eE~~aql~Re~~eK~re~e~~Kr~~~~L~~~~~~lk~~L 81 (103)
T 4h22_A 6 EVEEKYKKAMVSN---AQLDNEKTNFMYQVDTLKDMLLELEEQLAESRRQYEEKNKEFEREKHAHSILQFQFAEVKEAL 81 (103)
T ss_dssp --CCTHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666778877 333222211 1233444455555555555555555555555666666666666666666554
No 98
>3jsv_C NF-kappa-B essential modulator; ubiquitin, coiled-coil, cellular signaling, cytoplasm, isopeptide bond, nucleus, phosphoprotein, UBL conjugation; 2.70A {Mus musculus} PDB: 3f89_A 2zvo_B 2zvn_B
Probab=77.21 E-value=22 Score=28.33 Aligned_cols=66 Identities=15% Similarity=0.130 Sum_probs=46.3
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 239 MLSNRESARRSRRRKQAHLNELETQAGQLR---AEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRA 304 (308)
Q Consensus 239 ~lsNReSArRSR~RKk~~l~eLE~qV~~Le---~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lra 304 (308)
+..|-.+|-..=..|+..+.+|...+.+++ ..+.-|..++......|..-...-..|..+.+.|..
T Consensus 7 L~~~L~~aEeaL~~kq~~id~lke~~~q~~~~~E~i~vLk~Qv~IY~~DF~aERadREkl~~eKe~L~~ 75 (94)
T 3jsv_C 7 LRQQLQQAEEALVAKQELIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQE 75 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 344566777777789999999998888887 566778888888887777665555544444444433
No 99
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=77.01 E-value=14 Score=32.36 Aligned_cols=50 Identities=18% Similarity=0.165 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 248 RSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADI 299 (308)
Q Consensus 248 RSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l 299 (308)
--|.||++ .+|...+..++..+..|..++..|......|..+...|.+++
T Consensus 29 ~~rlkK~~--tEl~k~~~~~E~~~rELq~~~~~L~~~k~~Leke~~~LQa~L 78 (168)
T 3o0z_A 29 AVRLRKSH--TEMSKSISQLESLNRELQERNRILENSKSQTDKDYYQLQAIL 78 (168)
T ss_dssp HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455544 555555555555555555555555555555555444444443
No 100
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=76.98 E-value=17 Score=29.62 Aligned_cols=23 Identities=26% Similarity=0.291 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 021757 280 DVNQKYDESAVNNRILKADIETL 302 (308)
Q Consensus 280 ~L~qk~~~l~~ENr~Lra~l~~L 302 (308)
.|......+..+...|+.+|..|
T Consensus 101 ~L~~~kkkle~e~~~Lk~~led~ 123 (129)
T 2fxo_A 101 ELTAKKRKLEDECSELKRDIDDL 123 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333444444444444444
No 101
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=76.86 E-value=20 Score=27.14 Aligned_cols=49 Identities=12% Similarity=0.098 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 258 NELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 258 ~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
+.+...+..|+.+...++..+....++|+.|..=--.|-.+|.+.|..+
T Consensus 8 ~~~~~~i~~lE~eL~~~r~e~~~ql~EYq~LlniKl~Le~EIatYRkLL 56 (74)
T 2xv5_A 8 DTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 56 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455566666666666667777677777888877778888888877654
No 102
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=76.72 E-value=19 Score=27.09 Aligned_cols=51 Identities=10% Similarity=0.115 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAK 305 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrak 305 (308)
..++.++.++...+..+..+..++..|+.++..+..+=..+..++.....+
T Consensus 20 ~~~~~~e~~l~~~e~~~~~~E~ev~~L~kKiq~lE~eld~~ee~l~~a~~k 70 (81)
T 1ic2_A 20 DRAEQAEADKKAAEERSKQLEDELVALQKKLKGTEDELDKYSESLKDAQEK 70 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445555555555555555555555555555555555555555444444
No 103
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=76.70 E-value=25 Score=27.40 Aligned_cols=60 Identities=15% Similarity=0.249 Sum_probs=40.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 242 NRESARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRA 304 (308)
Q Consensus 242 NReSArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lra 304 (308)
|-+||=.+=-|-|+- +..++...+..|..+.++|.+...++..|..|=+.|+.+++.|+.
T Consensus 14 eLQSALeaEIqAKQ~---i~EELs~vr~~ni~~eskL~eae~rn~eL~~e~~~l~~~~eelq~ 73 (81)
T 1wt6_A 14 ELQEALEEEVLTRQS---LSREMEAIRTDNQNFASQLREAEARNRDLEAHVRQLQERMELLQA 73 (81)
T ss_dssp HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 566666665555543 334556677777888888877777777777777777777777653
No 104
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=75.63 E-value=4 Score=27.01 Aligned_cols=28 Identities=11% Similarity=0.172 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 256 HLNELETQAGQLRAEHSSLLKGLTDVNQ 283 (308)
Q Consensus 256 ~l~eLE~qV~~Le~EN~~L~~el~~L~q 283 (308)
++..||.+|+.|-.++..|..++..|+.
T Consensus 2 RMnQledKvEel~~~~~~l~nEv~Rl~~ 29 (34)
T 2r2v_A 2 KLKQVADKLEEVASKLYHNANELARVAK 29 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4677888888888888888777776654
No 105
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=75.36 E-value=1.7 Score=33.48 Aligned_cols=25 Identities=20% Similarity=0.294 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 273 SLLKGLTDVNQKYDESAVNNRILKA 297 (308)
Q Consensus 273 ~L~~el~~L~qk~~~l~~ENr~Lra 297 (308)
.|+.++.+|..+...|+.||..||.
T Consensus 19 vLKe~I~EL~e~~~qLE~EN~~Lk~ 43 (78)
T 1dip_A 19 ILKEQIRELVEKNSQLERENTLLKT 43 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555555555666666654
No 106
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=74.96 E-value=12 Score=28.60 Aligned_cols=51 Identities=16% Similarity=0.208 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHH
Q 021757 254 QAHLNELETQAGQLRAEHSSLLKGLTDV------NQKYDESAVNNRILKADIETLRA 304 (308)
Q Consensus 254 k~~l~eLE~qV~~Le~EN~~L~~el~~L------~qk~~~l~~ENr~Lra~l~~Lra 304 (308)
+..|+.|+.++..|+.+...|..++.+- ..++..+..+-..|..+++.+-.
T Consensus 21 qrEle~le~~Ie~LE~~i~~le~~ladp~~y~~d~~~~~~l~~~l~~~e~eLe~~~e 77 (89)
T 2lw1_A 21 QRELEQLPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFE 77 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3468899999999999999998888641 24566666666666666666544
No 107
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=74.85 E-value=33 Score=28.04 Aligned_cols=66 Identities=15% Similarity=0.170 Sum_probs=43.8
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHh
Q 021757 241 SNRESARRSRRRKQAHLNELETQAGQLRA---EHSSLLKGLTDVNQKYDE-------SAVNNRILKADIETLRAKK 306 (308)
Q Consensus 241 sNReSArRSR~RKk~~l~eLE~qV~~Le~---EN~~L~~el~~L~qk~~~-------l~~ENr~Lra~l~~Lrakv 306 (308)
.|-.+|...=..|+..+++|+.++.+++. ...-|..++......|.. +..+...|..+++.|+.++
T Consensus 31 ~~L~~AEeaL~~Kq~~idelk~ei~q~~~~lE~I~vLkaQv~IY~~DF~aERadREkl~~eKe~L~~ql~~Lq~q~ 106 (110)
T 2v4h_A 31 QQLQQAEEALVAKQELIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQLQREF 106 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchhhHHHHHhHHHHHHHHHHHHHHHH
Confidence 34456666666788888888888777777 566677777777666654 4455556666666666554
No 108
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=74.70 E-value=21 Score=27.98 Aligned_cols=13 Identities=15% Similarity=0.169 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHHH
Q 021757 290 VNNRILKADIETL 302 (308)
Q Consensus 290 ~ENr~Lra~l~~L 302 (308)
.++..|.-+|+-|
T Consensus 86 ~evasLnRriqll 98 (101)
T 3u59_A 86 AEVASLNRRIQLV 98 (101)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444433
No 109
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=74.24 E-value=21 Score=28.08 Aligned_cols=47 Identities=4% Similarity=0.102 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 256 HLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETL 302 (308)
Q Consensus 256 ~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~L 302 (308)
..+.++.++..++.++..+-.++..|+.++..+..+=..+..++...
T Consensus 24 rae~~e~~~k~~e~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea 70 (101)
T 3u1c_A 24 RAEQAEADKKAAEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKS 70 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444445555555555555555555555444444444444444433
No 110
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=74.05 E-value=20 Score=29.02 Aligned_cols=33 Identities=18% Similarity=0.269 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 273 SLLKGLTDVNQKYDESAVNNRILKADIETLRAK 305 (308)
Q Consensus 273 ~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrak 305 (308)
.+...+..|++.+..+..-...|..+++.|+..
T Consensus 66 ~~E~di~~lrK~lD~~~l~r~dLE~~iesL~eE 98 (119)
T 3ol1_A 66 EAENTLQSFRQDVDNASLARLDLERKVESLQEE 98 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444444444455555555443
No 111
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=73.97 E-value=22 Score=28.95 Aligned_cols=47 Identities=15% Similarity=0.127 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIET 301 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~ 301 (308)
+..-..|.++..|+.++.+|+.++.....-+..+..+|..|+.+...
T Consensus 11 ~~~~~~e~e~~~l~~~~~el~~~l~~~~~~~~e~g~~~~~lq~~~~~ 57 (125)
T 1joc_A 11 ERCLKGEGEIEKLQTKVLELQRKLDNTTAAVQELGRENQSLQIKHTQ 57 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccc
Confidence 44555666788888888888888887777777777788887765544
No 112
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=73.92 E-value=5.3 Score=26.37 Aligned_cols=30 Identities=3% Similarity=-0.006 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 278 LTDVNQKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 278 l~~L~qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
...|..++..|..+|..|..++..|+..|+
T Consensus 3 MnQLEdKVEeLl~~~~~Le~EV~RLk~ll~ 32 (34)
T 3c3f_A 3 MXQIEXKLEXILSXLYHXENEXARIXKLLX 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence 445666777788888888888888887653
No 113
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=73.51 E-value=16 Score=29.55 Aligned_cols=47 Identities=17% Similarity=0.081 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIET 301 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~ 301 (308)
-.|+++|..+.+++.|+....+++..++..+..|..+-..|+.+|..
T Consensus 37 D~LEe~eE~~aql~Re~~eK~re~e~~Kr~~~~L~~~~~~lk~~L~q 83 (103)
T 4h22_A 37 DMLLELEEQLAESRRQYEEKNKEFEREKHAHSILQFQFAEVKEALKQ 83 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45788888888888888888888888888888888888888877653
No 114
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=73.20 E-value=5.7 Score=26.08 Aligned_cols=29 Identities=7% Similarity=0.113 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 279 TDVNQKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 279 ~~L~qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
..|..++..|..+|..|..++..|+..|.
T Consensus 3 nQLEdKvEeLl~~~~~Le~EV~RLk~lL~ 31 (33)
T 3c3g_A 3 KXIEXKLXEIXSKXYHXENXLARIKXLLX 31 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHhhHHHHHHHHHHHHHc
Confidence 45566777788888888888888887653
No 115
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=73.18 E-value=16 Score=26.01 Aligned_cols=33 Identities=9% Similarity=0.115 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 274 LLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 274 L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
|..++..|..++..|..--+.-+.+|..|+..|
T Consensus 14 l~~~l~~L~~rN~rL~~~L~~AR~el~~Lkeel 46 (51)
T 3m91_A 14 LEARIDSLAARNSKLMETLKEARQQLLALREEV 46 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444456666666666666666654
No 116
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=73.15 E-value=3 Score=29.94 Aligned_cols=27 Identities=7% Similarity=0.185 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 256 HLNELETQAGQLRAEHSSLLKGLTDVN 282 (308)
Q Consensus 256 ~l~eLE~qV~~Le~EN~~L~~el~~L~ 282 (308)
+|..+...+..|..||..|..++..|+
T Consensus 28 FLd~v~~~~~~l~~e~~~L~~~~~~l~ 54 (57)
T 2wuj_A 28 FLAQVRKDYEIVLRKKTELEAKVNELD 54 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444444444444444433
No 117
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=73.12 E-value=27 Score=28.46 Aligned_cols=56 Identities=18% Similarity=0.356 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 246 ARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIET 301 (308)
Q Consensus 246 ArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~ 301 (308)
-+..+..=+.|+-+||+.-..|+........-|.++..+|..+.-.|.-|..+|..
T Consensus 47 lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k~n~aiErnalLE~El~E 102 (111)
T 2v66_B 47 TRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDE 102 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555566778888888888888888888888889999999999999888887753
No 118
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=72.96 E-value=3.7 Score=31.64 Aligned_cols=22 Identities=27% Similarity=0.368 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLK 276 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~ 276 (308)
.++.+|+.++.+|+.||.-|+.
T Consensus 22 e~I~EL~e~~~qLE~EN~~Lk~ 43 (78)
T 1dip_A 22 EQIRELVEKNSQLERENTLLKT 43 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777777777777776653
No 119
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=72.63 E-value=31 Score=26.61 Aligned_cols=51 Identities=16% Similarity=0.255 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAK 305 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrak 305 (308)
+.+..-..++..|+.-...|..--+.|..-+..+..|-..|...|+.|+.|
T Consensus 18 E~~~q~qaEl~sLrrT~~EL~~G~~KL~~mi~~l~~E~~~l~~ni~~lk~K 68 (78)
T 3iv1_A 18 EEMDRAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNIELLKKK 68 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444444444444444444444444444444443
No 120
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=72.59 E-value=10 Score=29.28 Aligned_cols=24 Identities=21% Similarity=0.156 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 280 DVNQKYDESAVNNRILKADIETLR 303 (308)
Q Consensus 280 ~L~qk~~~l~~ENr~Lra~l~~Lr 303 (308)
.+..+...+..+|..|+.+|+.|+
T Consensus 63 ~l~~~~~~L~~~n~~L~~rl~~L~ 86 (88)
T 1nkp_A 63 KLISEEDLLRKRREQLKHKLEQLG 86 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 333344456677777777777775
No 121
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C
Probab=72.19 E-value=5.8 Score=30.13 Aligned_cols=64 Identities=11% Similarity=0.092 Sum_probs=29.4
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 240 LSNRESARRSRRRKQAHLNELETQAGQL---RAEHSSLL---KGLTDVNQKYDESAVNNRILKADIETLR 303 (308)
Q Consensus 240 lsNReSArRSR~RKk~~l~eLE~qV~~L---e~EN~~L~---~el~~L~qk~~~l~~ENr~Lra~l~~Lr 303 (308)
...-..-|+-|.+=...+.+|..-|-.. ...-.-|. .-+..|+++...|..+|..|+..++...
T Consensus 8 ~~H~~~ErrRR~~in~~f~~L~~lvP~~~~k~~Ka~IL~~Ai~YI~~Lq~~~~~L~~e~~~L~~~~~~~~ 77 (82)
T 1am9_A 8 TAHNAIEKRYRSSINDKIIELKDLVVGTEAKLNKSAVLRKAIDYIRFLQHSNQKLKQENLSLRTAVHKSK 77 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3333445555554455666666544321 00111121 2223445555556666666666555443
No 122
>1gk7_A Vimentin; intermediate filament, heptad repeat; 1.4A {Homo sapiens} SCOP: h.1.20.1 PDB: 3g1e_A
Probab=71.61 E-value=5.7 Score=26.76 Aligned_cols=30 Identities=23% Similarity=0.242 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 272 SSLLKGLTDVNQKYDESAVNNRILKADIET 301 (308)
Q Consensus 272 ~~L~~el~~L~qk~~~l~~ENr~Lra~l~~ 301 (308)
+.|..++...-.+...|+.+|+.|..++..
T Consensus 9 q~LNdrlAsyidkVR~LE~~N~~Le~~i~~ 38 (39)
T 1gk7_A 9 QELNDRFANYIDKVRFLEQQNKILLAELEQ 38 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445556666667777888888888877753
No 123
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=71.21 E-value=15 Score=31.56 Aligned_cols=49 Identities=18% Similarity=0.237 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 257 LNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAK 305 (308)
Q Consensus 257 l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrak 305 (308)
+..|+.++.....+...|..++..-+.+...++.++..+..+++.|.+-
T Consensus 46 ~~~l~~~~~~~~~e~~~L~~~l~~E~~~R~~aE~~~~~ie~ElEeLTas 94 (154)
T 2ocy_A 46 YNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTAS 94 (154)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555555555555555555555555556666666666665553
No 124
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=70.66 E-value=25 Score=27.15 Aligned_cols=44 Identities=14% Similarity=0.159 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 248 RSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVN 291 (308)
Q Consensus 248 RSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~E 291 (308)
++-..=+..|+.|..+|..|+..+..+..++..+.++...+-.+
T Consensus 20 q~~~~Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQrd~Y~d 63 (83)
T 2xdj_A 20 QLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQ 63 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455677888899999999999999988888888777666554
No 125
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=70.54 E-value=16 Score=27.84 Aligned_cols=28 Identities=25% Similarity=0.259 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 252 RKQAHLNELETQAGQLRAEHSSLLKGLT 279 (308)
Q Consensus 252 RKk~~l~eLE~qV~~Le~EN~~L~~el~ 279 (308)
.|...+.+|+.++...+.+...|+.++.
T Consensus 37 ~kd~~I~eLEk~L~ekd~eI~~LqseLD 64 (72)
T 3nmd_A 37 QRDALIDELELELDQKDELIQMLQNELD 64 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566666666666666666655554
No 126
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=70.06 E-value=17 Score=32.52 Aligned_cols=8 Identities=0% Similarity=-0.251 Sum_probs=2.8
Q ss_pred HHHHHHHH
Q 021757 260 LETQAGQL 267 (308)
Q Consensus 260 LE~qV~~L 267 (308)
|+.++..|
T Consensus 37 le~~~~~l 44 (256)
T 3na7_A 37 ALNDKEAK 44 (256)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 127
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=69.32 E-value=4.8 Score=28.84 Aligned_cols=29 Identities=21% Similarity=0.344 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 278 LTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 278 l~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
|..+...+..+..||..|+.++..|..+|
T Consensus 29 Ld~v~~~~~~l~~e~~~L~~~~~~l~~~l 57 (57)
T 2wuj_A 29 LAQVRKDYEIVLRKKTELEAKVNELDERI 57 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 44566778888999999999999888765
No 128
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=68.22 E-value=8.5 Score=30.99 Aligned_cols=31 Identities=16% Similarity=0.143 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 276 KGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 276 ~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
.++..|++++..|..||..|+.++..|..+|
T Consensus 12 e~~~~lr~ei~~Le~E~~rLr~~~~~LE~~L 42 (100)
T 1go4_E 12 EEADTLRLKVEELEGERSRLEEEKRMLEAQL 42 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3666777777778888888888888777665
No 129
>4ati_A MITF, microphthalmia-associated transcription factor; DNA-binding protein-DNA complex, melanoma; 2.60A {Mus musculus} PDB: 4atk_A
Probab=68.18 E-value=1.9 Score=35.18 Aligned_cols=25 Identities=16% Similarity=0.122 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC
Q 021757 284 KYDESAVNNRILKADIETLRAKKFF 308 (308)
Q Consensus 284 k~~~l~~ENr~Lra~l~~Lrakvkm 308 (308)
+...|..+|..|..+|+.|+..+++
T Consensus 92 ~~~~l~~~n~~L~~riqeLE~~a~~ 116 (118)
T 4ati_A 92 RQKKLEHANRHLLLRVQELEMQARA 116 (118)
T ss_dssp -------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556888899999999999877653
No 130
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=68.04 E-value=9.3 Score=29.49 Aligned_cols=38 Identities=26% Similarity=0.261 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 259 ELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILK 296 (308)
Q Consensus 259 eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lr 296 (308)
+|-.+|+.|..|+..|..++..+++-...+...++.|.
T Consensus 34 DLI~rvdELt~E~e~l~~El~s~~~~~~r~~~ri~elE 71 (77)
T 2w83_C 34 DLIAKVDELTCEKDVLQGELEAVKQAKLKLEEKNRELE 71 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444444444433333333
No 131
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=68.02 E-value=45 Score=31.81 Aligned_cols=53 Identities=19% Similarity=0.175 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 246 ARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKAD 298 (308)
Q Consensus 246 ArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~ 298 (308)
+++--...+..++.|+++-+.|+.+...+..++...+++|+.+...-..|-.+
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (487)
T 3oja_A 433 AIRDWDMYQHKETQLAEENARLKKLNGEADLALASANATLQELVVREQNLASQ 485 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhHhcccHHHHHHHHHHHHHHh
Confidence 34444445555555555666666666666666666666666666655555544
No 132
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=67.41 E-value=34 Score=26.62 Aligned_cols=57 Identities=19% Similarity=0.332 Sum_probs=40.0
Q ss_pred HHHHHHHHHhhHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 233 DKRARRMLSNRESARRSRRR---KQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESA 289 (308)
Q Consensus 233 ~KR~RR~lsNReSArRSR~R---Kk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~ 289 (308)
.||.|=-++=|.|-...|.| -+..+.+|+.+-..|+.+...|..++..|..-+..+-
T Consensus 18 ~rR~rNN~AarrSR~krk~r~~e~~~r~~~Le~EN~~Lr~~v~~L~~E~~~Lr~ll~~~p 77 (87)
T 1hjb_A 18 IRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLP 77 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCc
Confidence 45555455555554444444 3466889999999999999999999998888776543
No 133
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=67.03 E-value=27 Score=24.40 Aligned_cols=44 Identities=14% Similarity=0.155 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 261 ETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRA 304 (308)
Q Consensus 261 E~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lra 304 (308)
+..+..+..+...+..++..+..++..+..+=...+..|..|..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~l~~~~~~I~~~k~ 54 (60)
T 3htk_A 11 ENQVEELTEKCSLKTDEFLKAKEKINEIFEKLNTIRDEVIKKKN 54 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333344444444444444444444444444433
No 134
>1fmh_B General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_B
Probab=66.99 E-value=9.2 Score=24.59 Aligned_cols=30 Identities=17% Similarity=0.202 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 278 LTDVNQKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 278 l~~L~qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
++.|+.+.+.|...|-.-+++++.||.+..
T Consensus 3 vqalkkrvqalkarnyaakqkvqalrhkcg 32 (33)
T 1fmh_B 3 VQALKKRVQALKARNYAAKQKVQALRHKCG 32 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 344555566777788888888888887753
No 135
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=65.78 E-value=20 Score=26.88 Aligned_cols=29 Identities=17% Similarity=0.274 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 274 LLKGLTDVNQKYDESAVNNRILKADIETL 302 (308)
Q Consensus 274 L~~el~~L~qk~~~l~~ENr~Lra~l~~L 302 (308)
|..++..|..+...|..+|..|++++..|
T Consensus 52 L~~~~~~l~~e~~~L~~~~~~L~~~l~~L 80 (83)
T 1nkp_B 52 MRRKNHTHQQDIDDLKRQNALLEQQVRAL 80 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44444444555556666666666666554
No 136
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=65.63 E-value=47 Score=26.00 Aligned_cols=65 Identities=15% Similarity=0.257 Sum_probs=30.5
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 239 MLSNRESARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLR 303 (308)
Q Consensus 239 ~lsNReSArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lr 303 (308)
+.++|.....-..........|..+=..+-.+.+.+..++..+..+..++.++-..-..++..|+
T Consensus 30 lEke~~~l~~el~~le~E~~~L~~eE~~~w~eyn~~~~ql~e~~dE~~Sl~~q~~~~~~qLdkL~ 94 (96)
T 3q8t_A 30 VEKNRKVVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLELDDELKSVENQMRYAQMQLDKLK 94 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34444444444433334444444443334444444444455555555555555555555555554
No 137
>2j5u_A MREC protein; bacterial cell shape determining protein MREC, cell shape regulation; 2.5A {Listeria monocytogenes}
Probab=65.39 E-value=3.1 Score=37.89 Aligned_cols=33 Identities=18% Similarity=0.255 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
Q 021757 267 LRAEHSSLLKGLTDVN---QKYDESAVNNRILKADI 299 (308)
Q Consensus 267 Le~EN~~L~~el~~L~---qk~~~l~~ENr~Lra~l 299 (308)
|..||..|++++..|+ .++..+..||..||.-+
T Consensus 24 l~~eN~~Lk~e~~~l~~~~~~~~~l~~En~rLr~lL 59 (255)
T 2j5u_A 24 TYTENQHLKERLEELAQLESEVADLKKENKDLKESL 59 (255)
T ss_dssp --CTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444444444333 23445666777776543
No 138
>3ra3_A P1C; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=65.14 E-value=4.3 Score=25.26 Aligned_cols=24 Identities=21% Similarity=0.261 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 265 GQLRAEHSSLLKGLTDVNQKYDES 288 (308)
Q Consensus 265 ~~Le~EN~~L~~el~~L~qk~~~l 288 (308)
..|+.||..|..++..|+|+...|
T Consensus 3 dalefendaleqkiaalkqkiasl 26 (28)
T 3ra3_A 3 DALEFENDALEQKIAALKQKIASL 26 (28)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHhccHHHHHHHHHHHHHHHHh
Confidence 356667777766666666665544
No 139
>3m0d_C TNF receptor-associated factor 1; trimeric helix coiled coiled, acetylation, alternative splic apoptosis, coiled coil, cytoplasm; 2.80A {Homo sapiens}
Probab=65.13 E-value=37 Score=24.68 Aligned_cols=52 Identities=17% Similarity=0.137 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
.-+.+||.++..++.-...+..++..+.-.+..+..++..=+..++.|.+||
T Consensus 6 ~~~~~le~kl~~lEnIv~~l~~eve~~~~~lea~~rq~~~d~~~Ie~Le~kv 57 (65)
T 3m0d_C 6 KLLAELEGKLRVFENIVAVLNKEVEASHLALATSIHQSQLDRERILSLEQRV 57 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 4556666666666554444544444444444444444443355555565554
No 140
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=65.12 E-value=9.8 Score=25.42 Aligned_cols=26 Identities=23% Similarity=0.282 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 281 VNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 281 L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
|..+...|..+|..|..++..|+..+
T Consensus 6 LE~KVEeLl~~~~~Le~eV~RLk~ll 31 (36)
T 1kd8_B 6 LKAKVEELKSKLWHLKNKVARLKKKN 31 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 34444455555555555555555543
No 141
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=65.02 E-value=27 Score=27.31 Aligned_cols=34 Identities=18% Similarity=0.142 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 268 RAEHSSLLKGLTDVNQKYDESAVNNRILKADIET 301 (308)
Q Consensus 268 e~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~ 301 (308)
-.||..|..++..++.+...+..+|..|+.-.+.
T Consensus 37 L~EN~~Lh~~ie~~~eEi~~Lk~en~~L~elA~~ 70 (83)
T 1wlq_A 37 LKENEKLHKEIEQKDSEIARLRKENKDLAEVAEH 70 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3478888888888888888888888887754443
No 142
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=64.88 E-value=28 Score=26.77 Aligned_cols=35 Identities=17% Similarity=0.226 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 254 QAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDES 288 (308)
Q Consensus 254 k~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l 288 (308)
..|+..|+.+...|..+...|..++..|..++..|
T Consensus 51 ~~YI~~L~~~~~~l~~~~~~L~~~n~~L~~rl~~L 85 (88)
T 1nkp_A 51 TAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQL 85 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35666666666666555555555555555555443
No 143
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=64.06 E-value=32 Score=35.05 Aligned_cols=34 Identities=12% Similarity=0.153 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 273 SLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 273 ~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
.|.+++..|+.+++.....=++|+..|+.++.++
T Consensus 114 ELRRrIqyLKekVdnQlsnIrvLQsnLedq~~kI 147 (562)
T 3ghg_A 114 DLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDM 147 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555555555555555666666555544
No 144
>3plt_A Sphingolipid long chain base-responsive protein L; eisosomes, LSP1, PIL1, BAR domain, plasma membrane, SELF-ASS phosphoprotein; 2.90A {Saccharomyces cerevisiae}
Probab=63.74 E-value=30 Score=31.67 Aligned_cols=67 Identities=13% Similarity=0.219 Sum_probs=40.9
Q ss_pred HHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 233 DKRARRMLSNRESA-RRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRA 304 (308)
Q Consensus 233 ~KR~RR~lsNReSA-rRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lra 304 (308)
-|-.-.-|+|||.. +.+|.||+.-.. ++..|+... --..++..|++++..++.+|-+-.+++..+.+
T Consensus 92 yR~~LK~IR~~E~svqp~R~~R~~l~~----~I~kLk~k~-P~s~kl~~LeqELvraEae~lvaEAqL~n~kR 159 (234)
T 3plt_A 92 YRVTLKSIRNIEASVQPSRDRKEKITD----EIAHLKYKD-PQSTKIPVLEQELVRAEAESLVAEAQLSNITR 159 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHC-TTCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHH----HHHHHhccC-CCCchHHHHHHHHHHHHHHhhHHHHHHHHhHH
Confidence 34444567888866 556666644333 333343321 12356778888888888888887777766544
No 145
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=63.28 E-value=26 Score=35.73 Aligned_cols=47 Identities=13% Similarity=0.198 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIET 301 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~ 301 (308)
+|.++|+.++..|+.+...-..+|..|+.-+..+..+=+.|..+|..
T Consensus 110 E~S~ELRRrIqyLKekVdnQlsnIrvLQsnLedq~~kIQRLEvDIdi 156 (562)
T 3ghg_A 110 RVSEDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDI 156 (562)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33446666666666655555566666666666555555555555543
No 146
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=62.90 E-value=10 Score=25.03 Aligned_cols=29 Identities=7% Similarity=0.228 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 278 LTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 278 l~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
...|..++..|..+|..|..++..|+..|
T Consensus 3 MnQLEdKvEeLl~~~~~L~~EV~RLk~lL 31 (34)
T 2bni_A 3 MKQIEDKLEEILSKGHHICNELARIKKLL 31 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHccHHHHHHHHHHHHHh
Confidence 34556677778888888888888887765
No 147
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=62.51 E-value=23 Score=27.54 Aligned_cols=34 Identities=18% Similarity=0.315 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 272 SSLLKGLTDVNQKYDESAVNNRILKADIETLRAK 305 (308)
Q Consensus 272 ~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrak 305 (308)
...+..+-.+..++......|+.|..+|+.|+.+
T Consensus 34 s~vr~~ni~~eskL~eae~rn~eL~~e~~~l~~~ 67 (81)
T 1wt6_A 34 EAIRTDNQNFASQLREAEARNRDLEAHVRQLQER 67 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334444444444444444444444444443
No 148
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=62.27 E-value=62 Score=26.26 Aligned_cols=52 Identities=19% Similarity=0.233 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
..+.++...+..|+.+...++..+....+.|+.|..=--.|..+|.+.|..|
T Consensus 77 ~~l~~~q~~i~~lE~eL~~~r~em~~ql~EYq~Ll~vKl~Ld~EIatYRkLL 128 (131)
T 3tnu_A 77 MQLAQIQEMIGSVEEQLAQLRCEMEQQNQEYKILLDVKTRLEQEIATYRRLL 128 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 3455666677778888888888888888888888877778888888887655
No 149
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=62.10 E-value=61 Score=26.16 Aligned_cols=51 Identities=16% Similarity=0.225 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 256 HLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 256 ~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
.+.++..++..|+.+...++..+....+.|+.|..=--.|..+|.+.|..|
T Consensus 76 ~l~~~q~~i~~lE~eL~~~r~e~~~ql~EYq~LlnvKl~Ld~EIatYRkLL 126 (129)
T 3tnu_B 76 ALKDARNKLAELEEALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLL 126 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 345555667777777777777777777788877777777888888877654
No 150
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=61.81 E-value=49 Score=25.36 Aligned_cols=50 Identities=16% Similarity=0.114 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 257 LNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 257 l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
+...+.....|+..+..|..+..+|..++..+.-....|.+.-..|..+|
T Consensus 30 l~k~e~~rkele~~~~~l~~ek~~L~~ql~eaEe~~~~L~~~K~eLE~~l 79 (89)
T 3bas_A 30 LAKTERIKKELEEQNVTLLEQKNDLFGSMKQLEDKVEELLSKNYHLENEV 79 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 44555566667777777777777776666666666666666666666655
No 151
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=61.49 E-value=21 Score=24.55 Aligned_cols=24 Identities=29% Similarity=0.289 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGL 278 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el 278 (308)
....+||.+|..|+.||..|++-+
T Consensus 17 ~~naeLEervstLq~EN~mLRqvl 40 (42)
T 2oqq_A 17 NKNSELEERLSTLQNENQMLRHIL 40 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHh
Confidence 446788888888888888887644
No 152
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=61.21 E-value=53 Score=25.24 Aligned_cols=49 Identities=20% Similarity=0.198 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLR 303 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lr 303 (308)
..|..|+.+++.-+.+-..++.++..+.+.+..--.|=..|+..|..|-
T Consensus 27 ~~v~~le~~Le~s~~~q~~~~~Elk~l~e~Ld~KI~eL~elRqgLakL~ 75 (79)
T 3cvf_A 27 HQLRAMERSLEEARAERERARAEVGRAAQLLDVSLFELSELREGLARLA 75 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhc
Confidence 4566677777777777777777777777777777777777777777663
No 153
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=60.92 E-value=20 Score=31.88 Aligned_cols=14 Identities=21% Similarity=0.145 Sum_probs=5.3
Q ss_pred HHHHHHHHHHHHHH
Q 021757 264 AGQLRAEHSSLLKG 277 (308)
Q Consensus 264 V~~Le~EN~~L~~e 277 (308)
|..|..||..|..+
T Consensus 22 V~~L~~En~~L~~q 35 (190)
T 4emc_A 22 VANLVNENFVLSEK 35 (190)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33333333333333
No 154
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=60.76 E-value=13 Score=24.53 Aligned_cols=28 Identities=7% Similarity=0.134 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 279 TDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 279 ~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
..|..+...|..+|..|..++..|+..|
T Consensus 4 ~QLEdKVEeLl~~n~~Le~EV~RLk~LL 31 (34)
T 1uo4_A 4 KQIEDKGEEILSKLYHIENELARIKKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4556666777778888888888887665
No 155
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=60.45 E-value=40 Score=23.48 Aligned_cols=50 Identities=12% Similarity=0.065 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 252 RKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIET 301 (308)
Q Consensus 252 RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~ 301 (308)
+...++.+++.++..++.+-..+..++..+.+.+..+..+=..|+.++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~l~~~~~~I~~~k~qi~~ 58 (60)
T 3htk_A 9 TLENQVEELTEKCSLKTDEFLKAKEKINEIFEKLNTIRDEVIKKKNQNEY 58 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34556666666777777777777777777777777777666666666654
No 156
>1uix_A RHO-associated kinase; coiled-coil, transferase; HET: MSE; 1.80A {Bos taurus} SCOP: h.1.27.1
Probab=59.61 E-value=42 Score=25.43 Aligned_cols=30 Identities=13% Similarity=0.214 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 260 LETQAGQLRAEHSSLLKGLTDVNQKYDESA 289 (308)
Q Consensus 260 LE~qV~~Le~EN~~L~~el~~L~qk~~~l~ 289 (308)
|...|..|..|+..|..++..+.+++..+.
T Consensus 2 ~~k~v~~l~~E~eel~~klk~~~ee~~~~~ 31 (71)
T 1uix_A 2 STSDVANLANEKEELNNKLKEAQEQLSRLK 31 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555555555555555555444
No 157
>1j1d_B Troponin T, TNT; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 2.61A {Homo sapiens} SCOP: h.1.25.1 PDB: 1j1e_B
Probab=59.26 E-value=68 Score=25.81 Aligned_cols=43 Identities=19% Similarity=0.204 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 265 GQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 265 ~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
+.|+.-..+|..++..|..+-=.++..-..-.-+|..|+.+|+
T Consensus 45 ~~L~e~~keLh~~I~~LEeEKYDlE~kv~kq~yEI~eL~~rV~ 87 (106)
T 1j1d_B 45 DQLREKAKELWQTIYNLEAEKFDLQEKFKQQKYEINVLRNRIN 87 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhHHHHHHHHHHH
Confidence 3566666667777766666655566555555667777777764
No 158
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=58.62 E-value=65 Score=30.54 Aligned_cols=34 Identities=15% Similarity=0.032 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 274 LLKGLTDVNQKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 274 L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
|.++...-..+..+++.|=..|.++|+.+++.|+
T Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (471)
T 3mq9_A 434 LDAEKAQGQKKVEELEGEITTLNHKLQDASAEVE 467 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444445566666666666666666666653
No 159
>2oto_A M protein; helical coiled coil, fibrinogen-binding, virulence factor, S active protein, toxin; 3.04A {Streptococcus pyogenes serotype M1} PDB: 2xny_M
Probab=58.61 E-value=54 Score=27.21 Aligned_cols=31 Identities=29% Similarity=0.441 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 258 NELETQAGQLRAEHSSLLKGLTDVNQKYDES 288 (308)
Q Consensus 258 ~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l 288 (308)
.+|+.++..|+..|..|..++..+..++..+
T Consensus 53 ~eL~~~~~~Le~~n~~L~~~lke~~~~~~~l 83 (155)
T 2oto_A 53 EELEKAKQALEDQRKDLETKLKELQQDYDLA 83 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777888888888888888888887777555
No 160
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=58.24 E-value=31 Score=29.08 Aligned_cols=51 Identities=18% Similarity=0.217 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 256 HLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 256 ~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
++..|...+.....+...|..++..-+.+...++.++..+..+++.|.+-|
T Consensus 33 ~l~~l~~~l~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElE~LTasL 83 (135)
T 2e7s_A 33 DYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTASL 83 (135)
T ss_dssp HHHHHHHHTTTHHHHHHTHHHHHHHTTSHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555556667777777777777777777777788888888888887654
No 161
>4ath_A MITF, microphthalmia-associated transcription factor; DNA binding protein, melanoma; HET: MSE; 1.95A {Mus musculus}
Probab=58.16 E-value=30 Score=26.93 Aligned_cols=17 Identities=24% Similarity=0.212 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHHHH
Q 021757 288 SAVNNRILKADIETLRA 304 (308)
Q Consensus 288 l~~ENr~Lra~l~~Lra 304 (308)
+...|+.|.-.+++|.-
T Consensus 61 le~~n~~l~~riqELE~ 77 (83)
T 4ath_A 61 LEHANRHLLLRVQELEM 77 (83)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHH
Confidence 45555555555555543
No 162
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=57.89 E-value=64 Score=25.04 Aligned_cols=28 Identities=18% Similarity=0.223 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVN 282 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~ 282 (308)
+.|.+|.-+|..|+.|-.+...+|...+
T Consensus 26 qEi~~Lr~kv~elEnErlQyEkKLKsTK 53 (81)
T 3qh9_A 26 QELRHLKIKVEELENERNQYEWKLKATK 53 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 4555666666666555555444444333
No 163
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=57.85 E-value=17 Score=23.80 Aligned_cols=28 Identities=11% Similarity=-0.015 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 280 DVNQKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 280 ~L~qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
.|..+...+..+|..|..++..|+..|.
T Consensus 4 QLEdKVEell~~~~~le~EV~Rl~~ll~ 31 (33)
T 2wq1_A 4 QLEDKIEENTSKIYHNTNEIARNTKLVG 31 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHhc
Confidence 4455566677777777777777776553
No 164
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C
Probab=57.50 E-value=48 Score=24.96 Aligned_cols=27 Identities=19% Similarity=0.204 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 254 QAHLNELETQAGQLRAEHSSLLKGLTD 280 (308)
Q Consensus 254 k~~l~eLE~qV~~Le~EN~~L~~el~~ 280 (308)
-.|+..|+.++..|+.++..|..++..
T Consensus 49 i~YI~~Lq~~~~~L~~e~~~L~~~~~~ 75 (82)
T 1am9_A 49 IDYIRFLQHSNQKLKQENLSLRTAVHK 75 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 578889999999988888888877764
No 165
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=57.11 E-value=75 Score=30.08 Aligned_cols=29 Identities=17% Similarity=0.201 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 275 LKGLTDVNQKYDESAVNNRILKADIETLR 303 (308)
Q Consensus 275 ~~el~~L~qk~~~l~~ENr~Lra~l~~Lr 303 (308)
.+++.+|..+...+..+-..++++|+.|+
T Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (471)
T 3mq9_A 442 QKKVEELEGEITTLNHKLQDASAEVERLR 470 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34444444444444444445555555554
No 166
>1p9i_A Cortexillin I/GCN4 hybrid peptide; coiled-coil, unknown function; 1.17A {Synthetic} SCOP: h.1.10.1
Probab=55.86 E-value=17 Score=23.10 Aligned_cols=26 Identities=23% Similarity=0.304 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 259 ELETQAGQLRAEHSSLLKGLTDVNQK 284 (308)
Q Consensus 259 eLE~qV~~Le~EN~~L~~el~~L~qk 284 (308)
.|..-+..|+.||.+|+.++++|-.+
T Consensus 3 qlnallasleaenkqlkakveellak 28 (31)
T 1p9i_A 3 QLNALLASLEAENKQLKAKVEELLAK 28 (31)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566778888888888887766443
No 167
>1fmh_A General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_A
Probab=55.54 E-value=21 Score=22.93 Aligned_cols=28 Identities=11% Similarity=0.266 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 279 TDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 279 ~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
..|.++....+.||-.|.+++..|....
T Consensus 4 aqlekevaqaeaenyqleqevaqlehec 31 (33)
T 1fmh_A 4 AQLEKEVAQAEAENYQLEQEVAQLEHEC 31 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhc
Confidence 4455566678899999999999887654
No 168
>1s1c_X RHO-associated, coiled-coil containing protein kinase 1; GTPase, RHO kinase, ROCK, signaling protein; HET: GNP; 2.60A {Homo sapiens} SCOP: h.1.27.1
Probab=55.32 E-value=41 Score=25.47 Aligned_cols=31 Identities=19% Similarity=0.304 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 259 ELETQAGQLRAEHSSLLKGLTDVNQKYDESA 289 (308)
Q Consensus 259 eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~ 289 (308)
+|...|..|..|+..|..++..+.+++..+.
T Consensus 3 ~L~k~i~~l~~E~eel~~klk~~~ee~~~~~ 33 (71)
T 1s1c_X 3 MLTKDIEILRRENEELTEKMKKAEEEYKLEK 33 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4666677777777777777766666666554
No 169
>1zme_C Proline utilization transcription activator; complex (transcription regulation/DNA), PUT3, Zn2Cys6, binuclear cluster; HET: DNA 5IU; 2.50A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1 PDB: 1ajy_A
Probab=54.85 E-value=11 Score=26.59 Aligned_cols=24 Identities=21% Similarity=0.209 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGL 278 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el 278 (308)
.|++.|+.++..|+.....|...+
T Consensus 44 ~~~~~L~~ri~~Le~~l~~l~~~l 67 (70)
T 1zme_C 44 KYLQQLQKDLNDKTEENNRLKALL 67 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578889999999888877776654
No 170
>2j5u_A MREC protein; bacterial cell shape determining protein MREC, cell shape regulation; 2.5A {Listeria monocytogenes}
Probab=54.28 E-value=7.7 Score=35.20 Aligned_cols=24 Identities=29% Similarity=0.519 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGL 278 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el 278 (308)
..|+....++..|+.||..|+.-|
T Consensus 36 ~~l~~~~~~~~~l~~En~rLr~lL 59 (255)
T 2j5u_A 36 EELAQLESEVADLKKENKDLKESL 59 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444444555666666666665543
No 171
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=54.12 E-value=15 Score=24.26 Aligned_cols=28 Identities=18% Similarity=0.166 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 279 TDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 279 ~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
..|..+...|..+|..|..++..|+..|
T Consensus 4 nQLEdkVEeLl~~~~~Le~eV~RL~~ll 31 (34)
T 2hy6_A 4 KQLADAVEELASANYHLANAVARLAKAV 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 3445556667777777777777777654
No 172
>2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A
Probab=53.93 E-value=60 Score=28.21 Aligned_cols=11 Identities=27% Similarity=0.425 Sum_probs=5.5
Q ss_pred HHHHHHHHHHH
Q 021757 292 NRILKADIETL 302 (308)
Q Consensus 292 Nr~Lra~l~~L 302 (308)
|..|+.+|..|
T Consensus 199 n~~L~~eLp~l 209 (251)
T 2fic_A 199 NVDLQEELPSL 209 (251)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 45555555444
No 173
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=53.69 E-value=70 Score=24.17 Aligned_cols=71 Identities=14% Similarity=0.171 Sum_probs=53.3
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 234 KRARRMLSNRESARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 234 KR~RR~lsNReSArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
|.++.-+-+... ....|-...+.++...+..|+.+...++..+....+.|+.|..=--.|-.+|.+.|..+
T Consensus 7 ~~~~~sLE~~l~--e~e~~~~~~~~~~q~~i~~lE~eL~~~r~e~~~q~~EYq~LlnvK~~Ld~EIatYRkLL 77 (84)
T 1gk4_A 7 KGTNESLERQMR--EMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLL 77 (84)
T ss_dssp HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 444444444333 23333445678888899999999999999999999999999998889999999988754
No 174
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=53.54 E-value=57 Score=23.17 Aligned_cols=36 Identities=6% Similarity=0.050 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 256 HLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVN 291 (308)
Q Consensus 256 ~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~E 291 (308)
.+..|..+|..|..+...|...+..|+........|
T Consensus 5 ki~~Lss~V~~L~~kVdqLssdV~al~~~v~~ak~e 40 (52)
T 1jcd_A 5 KADQASSDAQTANAKADQASNDANAARSDAQAAKDD 40 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355666666666666666666666555554444433
No 175
>2xzr_A Immunoglobulin-binding protein EIBD; cell adhesion, trimeric autotransporter adhesin, TAA; 2.80A {Enterobacteria phage p-eibd}
Probab=52.91 E-value=90 Score=25.23 Aligned_cols=71 Identities=13% Similarity=0.165 Sum_probs=38.0
Q ss_pred HHHHHhhHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 237 RRMLSNRESARRSRRRKQA---HLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 237 RR~lsNReSArRSR~RKk~---~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
+|.-+|+++-+.--.+=.+ .|.+-+.++...+.+..+-.+++..+..+...|...|.-|..++..|...+|
T Consensus 34 ~ri~~NtqaI~~NS~aiaanTr~lQqh~aRlnsqQrQI~ENhkEMKq~aaqsaaLlsk~yh~ene~ar~kkl~~ 107 (114)
T 2xzr_A 34 GRVTRNTQSIEKNSKAIAANTRTLQQHSARLDSQQRQINENHKEMKQIEDKIEEILSKIYHIENEIARIKKLIK 107 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHhchHHHHHhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4666777776522221111 1122223333333334444455555666677777777777777777766554
No 176
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=52.72 E-value=61 Score=23.64 Aligned_cols=54 Identities=13% Similarity=0.119 Sum_probs=30.1
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 240 LSNRESARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILK 296 (308)
Q Consensus 240 lsNReSArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lr 296 (308)
.+||.-|-.-=.. .+++|...+..-..+....+.++.+|+..++.|..|-..||
T Consensus 23 ~knr~EaE~~y~~---k~eel~~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el~slk 76 (77)
T 3trt_A 23 AKNLQEAEEWYKS---KFADLSEAANRNNDALRQAKQESTEYRRQVQSLTMEVDALK 76 (77)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHH---HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3555554432222 24566666666555555566666666666666666655443
No 177
>3w03_C DNA repair protein XRCC4; coiled-coil, NHEJ, DSBS repair, KU70/80, DNA-PKCS, DNA ligas binding protein; HET: DNA; 8.49A {Homo sapiens}
Probab=51.87 E-value=22 Score=31.38 Aligned_cols=29 Identities=24% Similarity=0.434 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 256 HLNELETQAGQLRAEHSSLLKGLTDVNQK 284 (308)
Q Consensus 256 ~l~eLE~qV~~Le~EN~~L~~el~~L~qk 284 (308)
.+.+|..++.+|+.+|..|+.+.+...++
T Consensus 153 ~~~~L~~~n~~LqkeNeRL~~E~n~~l~q 181 (184)
T 3w03_C 153 TIAENQAKNEHLQKENERLLRDWNDVQGR 181 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555556666666666665555544443
No 178
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=51.41 E-value=78 Score=25.90 Aligned_cols=38 Identities=18% Similarity=0.243 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHH
Q 021757 244 ESARRSRRRKQAHLNELETQAGQLRAE-------HSSLLKGLTDV 281 (308)
Q Consensus 244 eSArRSR~RKk~~l~eLE~qV~~Le~E-------N~~L~~el~~L 281 (308)
.-|++.-..=+.++..|+.++..-+.. |..|+.++..+
T Consensus 36 ~E~q~~v~ql~~~i~~Le~eL~e~r~~~q~a~~e~e~Lr~e~~~l 80 (120)
T 3i00_A 36 TESQRVVLQLKGHVSELEADLAEQQHLRQQAADDCEFLRAELDEL 80 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444455667777766665443 44455444433
No 179
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=51.31 E-value=40 Score=21.60 Aligned_cols=25 Identities=20% Similarity=0.302 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 259 ELETQAGQLRAEHSSLLKGLTDVNQ 283 (308)
Q Consensus 259 eLE~qV~~Le~EN~~L~~el~~L~q 283 (308)
.|.+++..|+.|...|+-++..|+|
T Consensus 6 alkqeiaalkkeiaalkfeiaalkq 30 (33)
T 4dzn_A 6 ALKQEIAALKKEIAALKFEIAALKQ 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3444444444444444444444443
No 180
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=50.36 E-value=24 Score=34.32 Aligned_cols=45 Identities=7% Similarity=0.064 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 259 ELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLR 303 (308)
Q Consensus 259 eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lr 303 (308)
+|..++..|+.+...|..+...++.+...+..|-..++.++..|+
T Consensus 46 dl~~~lk~le~~~~~L~~e~e~l~~~~~~~~~e~~~~~ee~~~l~ 90 (428)
T 4b4t_K 46 DIYFKLKKLEKEYELLTLQEDYIKDEQRHLKRELKRAQEEVKRIQ 90 (428)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 344444444444444444444444444444444444555555443
No 181
>2oto_A M protein; helical coiled coil, fibrinogen-binding, virulence factor, S active protein, toxin; 3.04A {Streptococcus pyogenes serotype M1} PDB: 2xny_M
Probab=50.13 E-value=60 Score=26.96 Aligned_cols=44 Identities=9% Similarity=0.119 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 260 LETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLR 303 (308)
Q Consensus 260 LE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lr 303 (308)
|..+...|..+...+...+..|..++..|...|..|+..+..++
T Consensus 34 Lk~e~e~l~~~~~~~~~~~~eL~~~~~~Le~~n~~L~~~lke~~ 77 (155)
T 2oto_A 34 LKARLENAMEVAGRDFKRAEELEKAKQALEDQRKDLETKLKELQ 77 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333334444444445555555554444443
No 182
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=50.06 E-value=56 Score=22.81 Aligned_cols=20 Identities=15% Similarity=0.280 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 021757 267 LRAEHSSLLKGLTDVNQKYD 286 (308)
Q Consensus 267 Le~EN~~L~~el~~L~qk~~ 286 (308)
|+..-+.|.+-+..|+.+..
T Consensus 22 lerdeqnlekiianlrdeia 41 (52)
T 3he5_B 22 LERDEQNLEKIIANLRDEIA 41 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhHHHHHHHHHHHHH
Confidence 33333334444443333333
No 183
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=49.43 E-value=37 Score=25.71 Aligned_cols=15 Identities=33% Similarity=0.448 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHHHH
Q 021757 286 DESAVNNRILKADIE 300 (308)
Q Consensus 286 ~~l~~ENr~Lra~l~ 300 (308)
..|..+|..|+++++
T Consensus 64 ~~L~~e~~~L~~~L~ 78 (80)
T 1nlw_A 64 DQLQREQRHLKRQLE 78 (80)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 344444555554444
No 184
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=48.63 E-value=45 Score=25.34 Aligned_cols=31 Identities=10% Similarity=0.202 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 274 LLKGLTDVNQKYDESAVNNRILKADIETLRA 304 (308)
Q Consensus 274 L~~el~~L~qk~~~l~~ENr~Lra~l~~Lra 304 (308)
.-..+..|..++.....+.+.|+.++..++.
T Consensus 38 kd~~I~eLEk~L~ekd~eI~~LqseLDKfrS 68 (72)
T 3nmd_A 38 RDALIDELELELDQKDELIQMLQNELDKYRS 68 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3344444555555555666666666655544
No 185
>3bbp_D GRIP and coiled-coil domain-containing protein 2; golgi complex, GRIP domain, RAB GTPase, ARL GTPase, golgin, RAB effector, clAsp protein; HET: GTP; 3.00A {Homo sapiens}
Probab=48.62 E-value=17 Score=27.58 Aligned_cols=44 Identities=14% Similarity=0.100 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 261 ETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRA 304 (308)
Q Consensus 261 E~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lra 304 (308)
..++..+...+..|..=|.+-..-...|..+|+.||.+|..|..
T Consensus 21 ~~~L~~~~k~~~Hl~~LL~EsEatnarL~eq~~lLK~EIRRlER 64 (71)
T 3bbp_D 21 VQKLSSTTKSADHLNGLLRETEATNAILMEQIKLLKSEIRRLER 64 (71)
T ss_dssp --------CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHh
Confidence 33333333333333333444444445566677777777766643
No 186
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=48.55 E-value=56 Score=23.07 Aligned_cols=20 Identities=20% Similarity=0.187 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 021757 259 ELETQAGQLRAEHSSLLKGL 278 (308)
Q Consensus 259 eLE~qV~~Le~EN~~L~~el 278 (308)
.|-.+|.+|+..+..+..++
T Consensus 15 ~L~~kv~~Le~~c~~~eQEi 34 (48)
T 3vmx_A 15 QLATKIQHLEFSCSEKEQEI 34 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccHHHHHH
Confidence 33444444444444444333
No 187
>1d7m_A Cortexillin I; coiled-coil, coiled-coil trigger site, alpha helix, dimeriza contractIle protein; 2.70A {Dictyostelium discoideum} SCOP: h.1.10.1
Probab=48.36 E-value=1e+02 Score=24.55 Aligned_cols=45 Identities=27% Similarity=0.345 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 244 ESARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDES 288 (308)
Q Consensus 244 eSArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l 288 (308)
++-+-||.-=..+-.+|+.-+..|+.+|..=.+++.+++.++...
T Consensus 14 e~EK~S~eeL~kQk~eL~~~l~~l~~e~~~R~~~i~el~akidd~ 58 (101)
T 1d7m_A 14 ESEKVSREQLIKQKDQLNSLLASLESEGAEREKRLRELEAKLDET 58 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445554444557788888888888888777777777666554
No 188
>1ik9_A DNA repair protein XRCC4; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens} SCOP: b.59.1.1 h.1.11.1 PDB: 3ii6_A* 1fu1_A* 3rwr_A*
Probab=48.23 E-value=51 Score=29.34 Aligned_cols=15 Identities=20% Similarity=0.446 Sum_probs=10.1
Q ss_pred CCChHHHHHHHHhhh
Q 021757 108 PVDSDEYRAYLKTKL 122 (308)
Q Consensus 108 ~~dp~~y~a~Lk~kL 122 (308)
.+..++|-+.|+.=|
T Consensus 60 ~~~~eey~~~l~~aL 74 (213)
T 1ik9_A 60 AMEKGKYVGELRKAL 74 (213)
T ss_dssp TCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 456677888876654
No 189
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=48.09 E-value=46 Score=40.53 Aligned_cols=41 Identities=15% Similarity=0.261 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 266 QLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 266 ~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
.++.+...|..++..|+.+|..+..|-..|+.+++..+.||
T Consensus 2032 ~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~~~~kl 2072 (3245)
T 3vkg_A 2032 EIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKV 2072 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444445555555555555555555555555555443
No 190
>4ath_A MITF, microphthalmia-associated transcription factor; DNA binding protein, melanoma; HET: MSE; 1.95A {Mus musculus}
Probab=47.99 E-value=41 Score=26.18 Aligned_cols=33 Identities=18% Similarity=0.302 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 254 QAHLNELETQAGQLRAEHSSLLKGLTDVNQKYD 286 (308)
Q Consensus 254 k~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~ 286 (308)
.+++.+.+.+...|+..|..|..++.+|.-+..
T Consensus 48 ~~r~~e~e~r~k~le~~n~~l~~riqELE~qa~ 80 (83)
T 4ath_A 48 QQRAKDLENRQKKLEHANRHLLLRVQELEMQAR 80 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 356777888888999999999999888766543
No 191
>2zvf_A Alanyl-tRNA synthetase; C-terminal, oligomerization domain, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding; 3.20A {Archaeoglobus fulgidus}
Probab=47.60 E-value=12 Score=30.99 Aligned_cols=30 Identities=10% Similarity=0.108 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 259 ELETQAGQLRAEHSSLLKGLTDVNQKYDES 288 (308)
Q Consensus 259 eLE~qV~~Le~EN~~L~~el~~L~qk~~~l 288 (308)
+|..+|..|..|+..|.+++..|+.++...
T Consensus 29 ~l~~~v~~l~~e~k~l~ke~~~l~~~~a~~ 58 (171)
T 2zvf_A 29 KLPKTVERFFEEWKDQRKEIERLKSVIADL 58 (171)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566666667777666666666666665544
No 192
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=47.45 E-value=99 Score=24.15 Aligned_cols=52 Identities=10% Similarity=0.076 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
..+..+...+..|+.+...++..+....+.|+.|..=--.|..+|.+.|..+
T Consensus 37 ~e~~~~q~~i~~lE~eL~~~r~e~~~ql~EYq~LlnvKl~Le~EIatYrkLL 88 (95)
T 3mov_A 37 KEKDNSRRMLTDKEREMAEIRDQMQQQLNDYEQLLDVKLALDMEISAYRKLL 88 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456667777777777778888888777888888888888888888887654
No 193
>3oa7_A Head morphogenesis protein, chaotic nuclear migra protein 67 fusion protein; coiled coils, structural protein, spindle POLE BODY; 2.30A {Bacillus phage PHI29}
Probab=47.16 E-value=68 Score=28.78 Aligned_cols=40 Identities=18% Similarity=0.230 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 264 AGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLR 303 (308)
Q Consensus 264 V~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lr 303 (308)
+++|+.+--....+..+|+.....+..||..|+..+..|+
T Consensus 32 ~~~~~a~~~s~~s~~~dl~~s~~~l~ae~~~L~~~l~kLe 71 (206)
T 3oa7_A 32 LQQLRVNYGSFVSEYNDLTKSHNTLSKELDNLRSRFGNLE 71 (206)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcc
Confidence 4556666666777778888888889999999999998886
No 194
>1ik9_A DNA repair protein XRCC4; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens} SCOP: b.59.1.1 h.1.11.1 PDB: 3ii6_A* 1fu1_A* 3rwr_A*
Probab=46.50 E-value=96 Score=27.52 Aligned_cols=24 Identities=8% Similarity=0.159 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 256 HLNELETQAGQLRAEHSSLLKGLT 279 (308)
Q Consensus 256 ~l~eLE~qV~~Le~EN~~L~~el~ 279 (308)
++..|..++..|+.++..|..++.
T Consensus 140 ~~~~L~~e~~~l~~~~~~l~~qlE 163 (213)
T 1ik9_A 140 KNEHLQKENERLLRDWNDVQGRFE 163 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444443
No 195
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=46.36 E-value=22 Score=23.77 Aligned_cols=17 Identities=18% Similarity=0.210 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHHHHH
Q 021757 287 ESAVNNRILKADIETLR 303 (308)
Q Consensus 287 ~l~~ENr~Lra~l~~Lr 303 (308)
.|..+|..|..++..|+
T Consensus 12 eLl~~~~~Le~EV~RL~ 28 (36)
T 1kd8_A 12 EIESEVWHLENEVARLE 28 (36)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHH
Confidence 33344444444444444
No 196
>3ra3_A P1C; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=45.82 E-value=23 Score=22.01 Aligned_cols=21 Identities=29% Similarity=0.382 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 021757 286 DESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 286 ~~l~~ENr~Lra~l~~Lrakv 306 (308)
..|+-||..|.++|..|.+|+
T Consensus 3 dalefendaleqkiaalkqki 23 (28)
T 3ra3_A 3 DALEFENDALEQKIAALKQKI 23 (28)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHhccHHHHHHHHHHHHHH
Confidence 356778888888888887775
No 197
>3e98_A GAF domain of unknown function; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 2.43A {Pseudomonas aeruginosa}
Probab=45.61 E-value=53 Score=29.62 Aligned_cols=16 Identities=13% Similarity=0.152 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHHHHHH
Q 021757 270 EHSSLLKGLTDVNQKY 285 (308)
Q Consensus 270 EN~~L~~el~~L~qk~ 285 (308)
+|..+..++..+..++
T Consensus 97 ~Ne~l~~~~~~l~l~L 112 (252)
T 3e98_A 97 ENDRLFDKTRRLVLDL 112 (252)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4444444444444333
No 198
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=45.36 E-value=1.1e+02 Score=24.76 Aligned_cols=7 Identities=14% Similarity=0.116 Sum_probs=2.5
Q ss_pred HHHHHHH
Q 021757 291 NNRILKA 297 (308)
Q Consensus 291 ENr~Lra 297 (308)
+-..+|.
T Consensus 92 eL~~~r~ 98 (131)
T 3tnu_A 92 QLAQLRC 98 (131)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 199
>1fmh_B General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_B
Probab=45.23 E-value=52 Score=21.06 Aligned_cols=29 Identities=14% Similarity=0.263 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 257 LNELETQAGQLRAEHSSLLKGLTDVNQKY 285 (308)
Q Consensus 257 l~eLE~qV~~Le~EN~~L~~el~~L~qk~ 285 (308)
+..|..+|..|...|-.-..+++.|+.+|
T Consensus 3 vqalkkrvqalkarnyaakqkvqalrhkc 31 (33)
T 1fmh_B 3 VQALKKRVQALKARNYAAKQKVQALRHKC 31 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 45567777777777777777777666654
No 200
>1ytz_T Troponin T; muscle, THIN filament, actin binding, calcium, contractIle protein; HET: DR6; 3.00A {Gallus gallus} SCOP: h.1.25.1 PDB: 1yv0_T 2w49_1 2w4u_1
Probab=45.03 E-value=52 Score=26.51 Aligned_cols=61 Identities=23% Similarity=0.205 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHH------H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 247 RRSRRRKQAHLNELE------T-QAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 247 rRSR~RKk~~l~eLE------~-qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
+.-|..|+.+|.+-. . ....|+.-..+|..++..|..+-=.++..-..-.-+|..|+.+|+
T Consensus 20 q~e~EeKkkiLaER~~pL~id~l~~~~L~e~~keLh~~I~~lEeEKYDlE~kv~kq~yEI~eL~~rV~ 87 (107)
T 1ytz_T 20 QTARETKKKVLAERRKPLNIDHLNEDKLRDKAKELWDWLYQLQTEKYDFAEQIKRKKYEIVTLRNRID 87 (107)
T ss_dssp HHHHHHHHHHHHHTCCCCCCSSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHH
Confidence 334445666766511 0 233466666777777777766655666666666667777777763
No 201
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=45.01 E-value=64 Score=32.17 Aligned_cols=22 Identities=5% Similarity=0.031 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 021757 278 LTDVNQKYDESAVNNRILKADI 299 (308)
Q Consensus 278 l~~L~qk~~~l~~ENr~Lra~l 299 (308)
...|.+++..++.+-..+..++
T Consensus 125 ~~~l~~~i~~l~~~~~~~~~~l 146 (501)
T 1wle_A 125 GREIRKQLTLLYPKEAQLEEQF 146 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333333
No 202
>3q0x_A Centriole protein; centrosome protein, coiled coil mediated dimer, structural P; 3.02A {Chlamydomonas reinhardtii}
Probab=44.92 E-value=45 Score=30.27 Aligned_cols=58 Identities=16% Similarity=0.208 Sum_probs=43.4
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 233 DKRARRMLSNRESARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILK 296 (308)
Q Consensus 233 ~KR~RR~lsNReSArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lr 296 (308)
....|+-+..|-.+=+ +.+..|+.++++.+.|++++..++...+++...+......+-
T Consensus 162 de~Ik~yLa~R~~~lK------~kl~~l~~~L~~~~~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 219 (228)
T 3q0x_A 162 DSVVKQFLAFRLSEVK------GTCHDLSDDLSRTRDDRDSMVAQLAQCRQQLAQLREQYDKHL 219 (228)
T ss_dssp HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 4566777766665433 356889999999999999999999988888877766655543
No 203
>2aze_A Transcription factor DP-1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.1
Probab=44.81 E-value=55 Score=28.19 Aligned_cols=19 Identities=32% Similarity=0.366 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 021757 250 RRRKQAHLNELETQAGQLR 268 (308)
Q Consensus 250 R~RKk~~l~eLE~qV~~Le 268 (308)
-++|++||.+|..|...++
T Consensus 21 I~~K~~~LqeL~~Q~vafk 39 (155)
T 2aze_A 21 IKQKQSQLQELILQQIAFK 39 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3688899999998877653
No 204
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=44.72 E-value=67 Score=23.39 Aligned_cols=25 Identities=16% Similarity=0.165 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 258 NELETQAGQLRAEHSSLLKGLTDVN 282 (308)
Q Consensus 258 ~eLE~qV~~Le~EN~~L~~el~~L~ 282 (308)
..|-.+|++|+..+.....++..|+
T Consensus 21 ~~L~~kv~~Le~~c~e~eQEieRL~ 45 (58)
T 3a2a_A 21 VQLAAKIQHLEFSCSEKEQEIERLN 45 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666777777777777776666554
No 205
>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1
Probab=44.33 E-value=15 Score=27.46 Aligned_cols=14 Identities=14% Similarity=0.280 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHH
Q 021757 254 QAHLNELETQAGQL 267 (308)
Q Consensus 254 k~~l~eLE~qV~~L 267 (308)
...+.+|..-|-.+
T Consensus 28 n~~f~~Lr~lvP~~ 41 (80)
T 1hlo_A 28 KDSFHSLRDSVPSL 41 (80)
T ss_dssp HHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHCcCC
Confidence 45556666555443
No 206
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=43.66 E-value=1.2e+02 Score=24.36 Aligned_cols=25 Identities=12% Similarity=0.363 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 258 NELETQAGQLRAEHSSLLKGLTDVN 282 (308)
Q Consensus 258 ~eLE~qV~~Le~EN~~L~~el~~L~ 282 (308)
..|+.++..|+..+..|...+.++.
T Consensus 46 q~L~~el~~l~~~~~~LE~~l~e~e 70 (129)
T 3tnu_B 46 QRLRAEIDNVKKQCANLQNAIADAE 70 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3344444444444444444443333
No 207
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=43.16 E-value=2.5e+02 Score=27.91 Aligned_cols=19 Identities=16% Similarity=0.237 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 021757 287 ESAVNNRILKADIETLRAK 305 (308)
Q Consensus 287 ~l~~ENr~Lra~l~~Lrak 305 (308)
.|..+=+.|+.++..|.++
T Consensus 120 ~l~~~~~~l~~~i~~l~~~ 138 (501)
T 1wle_A 120 SLRARGREIRKQLTLLYPK 138 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444444555555554433
No 208
>2ve7_A Kinetochore protein HEC1, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_C*
Probab=42.97 E-value=34 Score=31.89 Aligned_cols=32 Identities=16% Similarity=0.207 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 261 ETQAGQLRAEHSSLLKGLTDVNQKYDESAVNN 292 (308)
Q Consensus 261 E~qV~~Le~EN~~L~~el~~L~qk~~~l~~EN 292 (308)
+.+++.|+.+|+.|..+++.|+++...+...|
T Consensus 184 ~~eie~L~~~~~~L~eEi~~Le~~~e~~~k~n 215 (315)
T 2ve7_A 184 AFKLESLEAKNRALNEQIARLEQERSTANKAN 215 (315)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 44566666666666666666655554444433
No 209
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=42.88 E-value=1.6e+02 Score=25.14 Aligned_cols=59 Identities=17% Similarity=0.276 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 245 SARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLR 303 (308)
Q Consensus 245 SArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lr 303 (308)
-|-|+=.+-+..+.+||.++..-+..+..+...+...-..+..+...|-.|..+|..|.
T Consensus 95 ~AERsv~kLEk~id~lEd~L~~~Kek~~~i~~eLd~tl~el~~~~~~~~~~~~~~~~~~ 153 (155)
T 2efr_A 95 FAERSVTKLEKSIDDLEDELYAQKLKYKAISEEMKQLEDKVEELLSKNYHLENEVARLK 153 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHhh
Confidence 44455555555666666666666666666666666666666666666666666666553
No 210
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=42.34 E-value=1.5e+02 Score=36.35 Aligned_cols=74 Identities=11% Similarity=0.197 Sum_probs=42.8
Q ss_pred HHHHHH--HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHH
Q 021757 232 DDKRAR--RMLSNRESARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQK--------------YDESAVNNRIL 295 (308)
Q Consensus 232 e~KR~R--R~lsNReSArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk--------------~~~l~~ENr~L 295 (308)
++||.+ ...++-..|+..-..+++.|.+|+.+++.|+.+-+.+..+-+.|+.+ ...|..|+.+-
T Consensus 2010 ~Pkr~~l~~ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~~~~kl~rA~~Li~gL~~Ek~RW 2089 (3245)
T 3vkg_A 2010 GPLREEVEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLDNLNSERGRW 2089 (3245)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccH
Confidence 344443 44555556666666677778888877777776655544444433333 33455666666
Q ss_pred HHHHHHHHHH
Q 021757 296 KADIETLRAK 305 (308)
Q Consensus 296 ra~l~~Lrak 305 (308)
..++..|..+
T Consensus 2090 ~~~~~~l~~~ 2099 (3245)
T 3vkg_A 2090 EQQSENFNTQ 2099 (3245)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666666554
No 211
>3q0x_A Centriole protein; centrosome protein, coiled coil mediated dimer, structural P; 3.02A {Chlamydomonas reinhardtii}
Probab=42.07 E-value=79 Score=28.63 Aligned_cols=15 Identities=20% Similarity=0.476 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHHHHH
Q 021757 272 SSLLKGLTDVNQKYD 286 (308)
Q Consensus 272 ~~L~~el~~L~qk~~ 286 (308)
...+.++..++++|.
T Consensus 202 ~~~~~~~~~~~~~~~ 216 (228)
T 3q0x_A 202 AQCRQQLAQLREQYD 216 (228)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 333333344444333
No 212
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=41.67 E-value=1.1e+02 Score=26.02 Aligned_cols=27 Identities=22% Similarity=0.394 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 279 TDVNQKYDESAVNNRILKADIETLRAK 305 (308)
Q Consensus 279 ~~L~qk~~~l~~ENr~Lra~l~~Lrak 305 (308)
.+.--.|..|..||..++.++.-.|++
T Consensus 136 ~E~MdSFE~LkvENE~vkerl~mYR~Q 162 (167)
T 4gkw_A 136 AENMDSFEKLSMENENLKEKIAHYRAQ 162 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhhhhHhHHHHHHHHHHh
Confidence 344456777888898888888776653
No 213
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=41.57 E-value=56 Score=31.94 Aligned_cols=35 Identities=11% Similarity=0.113 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 272 SSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 272 ~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
..|..++..|+++...-...=++|+..|+.++.++
T Consensus 116 ~eLe~~i~~lk~~V~~q~~~ir~Lq~~l~~q~~ki 150 (390)
T 1deq_A 116 EDLRSRIEILRRKVIEQVQRINLLQKNVRDQLVDM 150 (390)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 34555555555555555555555666655555544
No 214
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=41.29 E-value=73 Score=31.12 Aligned_cols=14 Identities=29% Similarity=0.304 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHHHh
Q 021757 293 RILKADIETLRAKK 306 (308)
Q Consensus 293 r~Lra~l~~Lrakv 306 (308)
..|+.+|..|..++
T Consensus 122 ~~l~~~i~~l~~~~ 135 (409)
T 1m1j_C 122 TQLKQKIAQLESHC 135 (409)
T ss_dssp HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHh
Confidence 34455555555443
No 215
>3m0a_A TNF receptor-associated factor 2; TRAF2: CIAP2 and the TRAF1: TRAF2: CIAP2 complexes, apoptosi coil, cytoplasm, metal-binding; 2.61A {Homo sapiens} PDB: 3m0d_A 3m06_A
Probab=39.94 E-value=99 Score=21.96 Aligned_cols=16 Identities=31% Similarity=0.447 Sum_probs=6.4
Q ss_pred HHHHHHHHHHHHHHHH
Q 021757 290 VNNRILKADIETLRAK 305 (308)
Q Consensus 290 ~ENr~Lra~l~~Lrak 305 (308)
.++...+..++.|..|
T Consensus 40 ~q~~~~~~~i~~Le~k 55 (66)
T 3m0a_A 40 RQHRLDQDKIEALSSK 55 (66)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hhhhHHHhHHHHHHHH
Confidence 3333334444444443
No 216
>2er8_A Regulatory protein Leu3; Zn(2)Cys(6) binuclear cluster motif, transcription activator/DNA complex; 2.85A {Saccharomyces cerevisiae} PDB: 2ere_A 2erg_A
Probab=39.94 E-value=16 Score=26.06 Aligned_cols=21 Identities=19% Similarity=0.260 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 021757 254 QAHLNELETQAGQLRAEHSSL 274 (308)
Q Consensus 254 k~~l~eLE~qV~~Le~EN~~L 274 (308)
..|+..||.+|..|+.....|
T Consensus 48 ~~~~~~Le~ri~~Le~~l~~l 68 (72)
T 2er8_A 48 RARNEAIEKRFKELTRTLTNL 68 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 378888998888887665544
No 217
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=39.64 E-value=1.2e+02 Score=23.04 Aligned_cols=28 Identities=21% Similarity=0.366 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 278 LTDVNQKYDESAVNNRILKADIETLRAK 305 (308)
Q Consensus 278 l~~L~qk~~~l~~ENr~Lra~l~~Lrak 305 (308)
+..|++-...+..--..|..+++.|...
T Consensus 51 ~~~LrkdvD~a~l~r~dLE~kvesL~eE 78 (86)
T 3swk_A 51 LQSFRQDVDNASLARLDLERKVESLQEE 78 (86)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333444444444455555555443
No 218
>3w03_C DNA repair protein XRCC4; coiled-coil, NHEJ, DSBS repair, KU70/80, DNA-PKCS, DNA ligas binding protein; HET: DNA; 8.49A {Homo sapiens}
Probab=39.28 E-value=66 Score=28.33 Aligned_cols=34 Identities=9% Similarity=0.071 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDES 288 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l 288 (308)
+++.-|=..+..|+.+|..|.+++..|+++....
T Consensus 145 elid~~ld~~~~L~~~n~~LqkeNeRL~~E~n~~ 178 (184)
T 3w03_C 145 ELICYCLDTIAENQAKNEHLQKENERLLRDWNDV 178 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677777888888888888877777666665543
No 219
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=39.07 E-value=1.6e+02 Score=24.04 Aligned_cols=48 Identities=15% Similarity=0.135 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETL 302 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~L 302 (308)
+.+.-|+.|+..++..-..=+.--+.+..+...|..+.+.|+.++..|
T Consensus 62 E~I~vLkaQv~IY~~DF~aERadREkl~~eKe~L~~ql~~Lq~q~~~l 109 (110)
T 2v4h_A 62 ETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQLQREFNKL 109 (110)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHccchhhHHHHHhHHHHHHHHHHHHHHHHHhc
Confidence 367778888887776655555555566666667777777777666543
No 220
>2lz1_A Nuclear factor erythroid 2-related factor 2; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=38.98 E-value=0.55 Score=37.32 Aligned_cols=23 Identities=30% Similarity=0.304 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHH
Q 021757 232 DDKRARRMLSNRESARRSRRRKQ 254 (308)
Q Consensus 232 e~KR~RR~lsNReSArRSR~RKk 254 (308)
-.+..||.-+||.+|+++|.||.
T Consensus 64 lIrdiRRRgKNkvAAqnCRKRKl 86 (90)
T 2lz1_A 64 LIRDIRRRGKNKVAAQNCRKRKL 86 (90)
T ss_dssp HHHHHHHHSCSCCCCCCCSCCCC
T ss_pred HHHHHHHhhhhHHHHHHcchhhc
Confidence 35778899999999999999884
No 221
>2oa5_A Hypothetical protein BQLF2; MHR28B, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: PE5; 2.10A {Murid herpesvirus 4} SCOP: d.362.1.1 PDB: 2h3r_A*
Probab=38.71 E-value=17 Score=29.76 Aligned_cols=22 Identities=14% Similarity=0.374 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 021757 279 TDVNQKYDESAVNNRILKADIE 300 (308)
Q Consensus 279 ~~L~qk~~~l~~ENr~Lra~l~ 300 (308)
++|..++..|..||+.||.+|.
T Consensus 11 EeLaaeL~kLqmENK~LKkkl~ 32 (110)
T 2oa5_A 11 EEMVKEVERLKLENKTLKQKVK 32 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 4555566677788888877764
No 222
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=38.68 E-value=1.4e+02 Score=23.25 Aligned_cols=23 Identities=22% Similarity=0.205 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 021757 259 ELETQAGQLRAEHSSLLKGLTDV 281 (308)
Q Consensus 259 eLE~qV~~Le~EN~~L~~el~~L 281 (308)
.|..+|..|+.|+..|+.++..|
T Consensus 50 ~Lh~~ie~l~eEi~~lk~en~eL 72 (83)
T 1uii_A 50 KLHKEIEQKDNEIARLKKENKEL 72 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444433
No 223
>2zvf_A Alanyl-tRNA synthetase; C-terminal, oligomerization domain, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding; 3.20A {Archaeoglobus fulgidus}
Probab=38.28 E-value=73 Score=26.14 Aligned_cols=28 Identities=18% Similarity=0.191 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 273 SLLKGLTDVNQKYDESAVNNRILKADIE 300 (308)
Q Consensus 273 ~L~~el~~L~qk~~~l~~ENr~Lra~l~ 300 (308)
.|..++..|.+++..+..+...|+.++.
T Consensus 29 ~l~~~v~~l~~e~k~l~ke~~~l~~~~a 56 (171)
T 2zvf_A 29 KLPKTVERFFEEWKDQRKEIERLKSVIA 56 (171)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444444443
No 224
>2ve7_C Kinetochore protein NUF2, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_D*
Probab=38.26 E-value=18 Score=32.84 Aligned_cols=37 Identities=11% Similarity=0.030 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 271 HSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 271 N~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
..++..+.+.+..+...+..||+.|+++|+.|++++.
T Consensus 143 ~~e~~~~~e~~~~~i~ql~~En~~le~~Ie~Lk~e~~ 179 (250)
T 2ve7_C 143 YMEFLWQYKSSADKMQQLNAAHQEALMKLERLEKEVD 179 (250)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHSCC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4455566666777777888888888888888887653
No 225
>4dzo_A Mitotic spindle assembly checkpoint protein MAD1; homodimer, kinetochore, mitosis, spindle checkpoint protein, nucleus, cell cycle; HET: MSE; 1.76A {Homo sapiens}
Probab=37.75 E-value=63 Score=26.42 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESA 289 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~ 289 (308)
+.+.+|+.+|+.++..|..|+.-...-.++|..+.
T Consensus 4 ~e~~~l~~qi~~~ekr~~RLKevF~~ks~eFReav 38 (123)
T 4dzo_A 4 KEVAELKKQVESAELKNQRLKEVFQTKIQEFRKAC 38 (123)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46778888888888888888777776666666543
No 226
>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus}
Probab=37.04 E-value=2.3 Score=34.65 Aligned_cols=37 Identities=24% Similarity=0.385 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 270 EHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 270 EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
+...|..++..|.++...|..||..|+.++..|+.++
T Consensus 59 ~~~~LE~e~~~L~~e~e~L~~En~~l~~E~~~lk~k~ 95 (107)
T 3a5t_A 59 QKEELEKQKAELQQEVEKLASENASMKLELDALRSKY 95 (107)
T ss_dssp HHHHHHHHHTTTSSTTTTTTSTTSHHHHTTTSSSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555556666666677777777777766655543
No 227
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=36.67 E-value=65 Score=31.30 Aligned_cols=40 Identities=10% Similarity=0.182 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 257 LNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILK 296 (308)
Q Consensus 257 l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lr 296 (308)
+..|+.++..|+.|+..|..++..+++++..+..|.+.|+
T Consensus 51 lk~le~~~~~L~~e~e~l~~~~~~~~~e~~~~~ee~~~l~ 90 (428)
T 4b4t_K 51 LKKLEKEYELLTLQEDYIKDEQRHLKRELKRAQEEVKRIQ 90 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4456666666666777777777777777766666666554
No 228
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=36.56 E-value=68 Score=27.77 Aligned_cols=9 Identities=33% Similarity=0.294 Sum_probs=0.0
Q ss_pred hhhhhHHHH
Q 021757 121 KLDLACAAV 129 (308)
Q Consensus 121 kL~~~~AAv 129 (308)
||-++.+|+
T Consensus 30 k~~la~~al 38 (175)
T 3lay_A 30 KSAIALIAL 38 (175)
T ss_dssp ---------
T ss_pred HHHHHHHHH
Confidence 444444443
No 229
>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}
Probab=36.52 E-value=69 Score=23.91 Aligned_cols=32 Identities=22% Similarity=0.287 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 251 RRKQAHLNELETQAGQLRAEHSSLLKGLTDVN 282 (308)
Q Consensus 251 ~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~ 282 (308)
..|...+.+||..+..-..++..|+.++..++
T Consensus 21 ~~Kde~I~eLE~~L~~kd~eI~eLr~~LdK~q 52 (67)
T 1zxa_A 21 MLKEERIKELEKRLSEKEEEIQELKRKLHKCQ 52 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678888999888888888888887776543
No 230
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=36.52 E-value=56 Score=21.53 Aligned_cols=26 Identities=15% Similarity=0.116 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 280 DVNQKYDESAVNNRILKADIETLRAK 305 (308)
Q Consensus 280 ~L~qk~~~l~~ENr~Lra~l~~Lrak 305 (308)
.|..+...+..+|..|..++..|+..
T Consensus 5 QledKvEel~~~~~~l~nEv~Rl~~l 30 (34)
T 2r2v_A 5 QVADKLEEVASKLYHNANELARVAKL 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 34445555566666666666666544
No 231
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=36.23 E-value=1.4e+02 Score=22.55 Aligned_cols=48 Identities=17% Similarity=0.287 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETL 302 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~L 302 (308)
..+..|+.+++.-+.+-..++.++..+.+.+..--.|=..|+..+..|
T Consensus 21 ~~v~~le~~Le~s~~~q~~~~~Elk~~~e~Ld~KI~eL~elrq~LakL 68 (72)
T 3cve_A 21 GQLSEMEQRLEKSQSEQDAFRSNLKTLLEILDGKIFELTELRDNLAKL 68 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 455666666666666666666777777777776666767777766655
No 232
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=36.18 E-value=1.2e+02 Score=21.77 Aligned_cols=24 Identities=25% Similarity=0.307 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 258 NELETQAGQLRAEHSSLLKGLTDV 281 (308)
Q Consensus 258 ~eLE~qV~~Le~EN~~L~~el~~L 281 (308)
++|..+-..|+.|-..-..++..|
T Consensus 13 e~Lk~ENshLrrEL~dNS~~lskL 36 (54)
T 1deb_A 13 EALKMENSNLRQELEDNSNHLTKL 36 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHhhHHHHHHH
Confidence 334444444444333333333333
No 233
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=35.92 E-value=1.5e+02 Score=22.94 Aligned_cols=41 Identities=12% Similarity=0.147 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 257 LNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKA 297 (308)
Q Consensus 257 l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra 297 (308)
+++||.+-.+.+..-..-+.++..|++++..-..|=+.|+.
T Consensus 35 v~elEnErlQyEkKLKsTK~El~~Lq~qLe~kd~ei~rL~~ 75 (81)
T 3qh9_A 35 VEELENERNQYEWKLKATKAEVAQLQEQVALKDAEIERLHS 75 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhHHHHHHHHH
Confidence 34455544444444444444455555444444444444433
No 234
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=35.29 E-value=1.7e+02 Score=23.30 Aligned_cols=52 Identities=17% Similarity=0.213 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
..+..|+.++.....+...|..++..-+.+...+..++..|..+|+.|.+-|
T Consensus 12 e~l~~le~~~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElEeLTasL 63 (97)
T 2eqb_B 12 EDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTASL 63 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456666666666667777777777777777777777777777777776644
No 235
>3cl3_D NF-kappa-B essential modulator; death effector domain, coiled-coil, coiled coil, cytoplasm, disease mutation, ectodermal dysplasia; 3.20A {Homo sapiens}
Probab=34.74 E-value=12 Score=31.46 Aligned_cols=17 Identities=12% Similarity=0.018 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHHHHHhC
Q 021757 291 NNRILKADIETLRAKKF 307 (308)
Q Consensus 291 ENr~Lra~l~~Lrakvk 307 (308)
.|..|+-+++.|++.+|
T Consensus 56 ~~d~L~lQ~esmeaalk 72 (130)
T 3cl3_D 56 QVDQLRMQGQSVEAALR 72 (130)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34444444444444433
No 236
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=34.27 E-value=3.8e+02 Score=27.07 Aligned_cols=17 Identities=35% Similarity=0.628 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHH
Q 021757 289 AVNNRILKADIETLRAK 305 (308)
Q Consensus 289 ~~ENr~Lra~l~~Lrak 305 (308)
..+.+.|+.+|..|+.+
T Consensus 566 ~~~~~~~~~ei~~l~~~ 582 (592)
T 1f5n_A 566 QKESRIMKNEIQDLQTK 582 (592)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 35566677777777654
No 237
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=33.52 E-value=1.8e+02 Score=25.75 Aligned_cols=22 Identities=18% Similarity=0.226 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 021757 263 QAGQLRAEHSSLLKGLTDVNQK 284 (308)
Q Consensus 263 qV~~Le~EN~~L~~el~~L~qk 284 (308)
+++....|+..|+.++..++++
T Consensus 35 ql~~k~~ei~~L~~ql~sl~~~ 56 (190)
T 4emc_A 35 KLDTKATEIKQLQKQIDSLNAQ 56 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 3333333344444444333333
No 238
>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1
Probab=33.44 E-value=41 Score=25.04 Aligned_cols=22 Identities=18% Similarity=0.223 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 021757 283 QKYDESAVNNRILKADIETLRA 304 (308)
Q Consensus 283 qk~~~l~~ENr~Lra~l~~Lra 304 (308)
.-+..|..++..|+.+++.|+.
T Consensus 57 ~YI~~L~~~~~~L~~e~~~L~~ 78 (80)
T 1hlo_A 57 EYIQYMRRKNHTHQQDIDDLKR 78 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 3344555556666666655554
No 239
>2qyw_A Vesicle transport through interaction with T-SNAR homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V
Probab=33.38 E-value=1.7e+02 Score=22.76 Aligned_cols=56 Identities=9% Similarity=0.101 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 252 RKQAHLNELETQAGQLRAEHSSLLKGLTDVN-QKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 252 RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~-qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
.|++.+.+.+..+...+.-...|.-++..+- ..-..+...=+..|.++..|+..+|
T Consensus 46 ~rk~~i~~ie~~ldEA~eLl~qMelE~r~~p~s~R~~~~~klr~Yk~dL~~lk~elk 102 (102)
T 2qyw_A 46 EKKKLVRDFDEKQQEANETLAEMEEELRYAPLTFRNPMMSKLRNYRKDLAKLHREVR 102 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 3344455555555554444444444444331 1223444555666777777777664
No 240
>2q6q_A Spindle POLE BODY component SPC42; SPC42P, budding yeast, cell cycle; 1.97A {Saccharomyces cerevisiae}
Probab=32.69 E-value=1.6e+02 Score=22.28 Aligned_cols=30 Identities=20% Similarity=0.111 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 276 KGLTDVNQKYDESAVNNRILKADIETLRAK 305 (308)
Q Consensus 276 ~el~~L~qk~~~l~~ENr~Lra~l~~Lrak 305 (308)
.+|.....-...|+.++..++..+..|..+
T Consensus 31 ~KLiKYtelnKKLe~~~~~~q~s~~~l~k~ 60 (74)
T 2q6q_A 31 SKLEKYVDITKKLEDQNLNLQIKISDLEKK 60 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHHhh
Confidence 333333333344555556666666665544
No 241
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=32.02 E-value=2.1e+02 Score=23.83 Aligned_cols=24 Identities=13% Similarity=0.108 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 283 QKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 283 qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
..|+....+-..+..+|..|+.+|
T Consensus 46 aeY~aak~~q~~~e~rI~~L~~~L 69 (158)
T 2p4v_A 46 ADYQYNKKRLREIDRRVRYLTKCM 69 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666677777777777777765
No 242
>3mtu_A Tropomyosin alpha-1 chain, microtubule-associated RP/EB family member 1; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: MSE; 2.10A {Gallus gallus} PDB: 3mud_C*
Probab=32.00 E-value=88 Score=23.39 Aligned_cols=47 Identities=15% Similarity=0.102 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIET 301 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~ 301 (308)
.+.+++..++..|+.|..-...+|..+.--|+....++..|..+|..
T Consensus 16 ~Ekdna~e~~e~lE~ERdFYf~KLRdiE~l~q~~e~e~~~l~~~I~~ 62 (75)
T 3mtu_A 16 LDKENALDRAEQAEADKDFYFGKLRNIELICQENEGENDPVLQRIVD 62 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 35566777777777777777777777777777766666666665544
No 243
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=31.92 E-value=2e+02 Score=23.13 Aligned_cols=41 Identities=20% Similarity=0.274 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 258 NELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKAD 298 (308)
Q Consensus 258 ~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~ 298 (308)
.+.+.++..|......|..++..+..++......|..|...
T Consensus 65 ~e~EE~~~~L~~~k~eLe~~l~el~~rleeeee~~~~L~~~ 105 (129)
T 2fxo_A 65 ADAEERCDQLIKNKIQLEAKVKEMNKRLEDEEEMNAELTAK 105 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444454444455555555554444444444444333
No 244
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=31.61 E-value=1.6e+02 Score=29.62 Aligned_cols=35 Identities=11% Similarity=0.189 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 272 SSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 272 ~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
..|..++..|+++...-...=++|+..|+.++.++
T Consensus 114 ~eLe~ri~yIK~kVd~qi~~IrvLq~~l~~q~skI 148 (491)
T 1m1j_A 114 TELRRRIVTLKQRVATQVNRIKALQNSIQEQVVEM 148 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555665555555555555666666555544
No 245
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=31.23 E-value=1.4e+02 Score=21.13 Aligned_cols=19 Identities=11% Similarity=0.116 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 021757 258 NELETQAGQLRAEHSSLLK 276 (308)
Q Consensus 258 ~eLE~qV~~Le~EN~~L~~ 276 (308)
..|-.+|.+|..+...|+.
T Consensus 14 ~~L~~kVdqLssdV~al~~ 32 (52)
T 1jcd_A 14 QTANAKADQASNDANAARS 32 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444443
No 246
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=31.01 E-value=1.9e+02 Score=28.23 Aligned_cols=29 Identities=21% Similarity=0.222 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 274 LLKGLTDVNQKYDESAVNNRILKADIETL 302 (308)
Q Consensus 274 L~~el~~L~qk~~~l~~ENr~Lra~l~~L 302 (308)
|..+...|.+++..+..+-..|..++..+
T Consensus 74 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (455)
T 2dq0_A 74 LLAKSREIVKRIGELENEVEELKKKIDYY 102 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444555555555555555554443
No 247
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=30.95 E-value=3.6e+02 Score=25.84 Aligned_cols=27 Identities=15% Similarity=0.088 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 274 LLKGLTDVNQKYDESAVNNRILKADIE 300 (308)
Q Consensus 274 L~~el~~L~qk~~~l~~ENr~Lra~l~ 300 (308)
|..+...+..+...+..+-..+..++.
T Consensus 69 l~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (421)
T 1ses_A 69 LIARGKALGEEAKRLEEALREKEARLE 95 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444444443
No 248
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=30.72 E-value=4.1e+02 Score=26.35 Aligned_cols=12 Identities=17% Similarity=0.174 Sum_probs=4.9
Q ss_pred HHHHHHHHhhHH
Q 021757 234 KRARRMLSNRES 245 (308)
Q Consensus 234 KR~RR~lsNReS 245 (308)
|..-..++|+.+
T Consensus 106 e~~l~~lsn~Ts 117 (464)
T 1m1j_B 106 KDRVAKFSDTST 117 (464)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHhhhhh
Confidence 333344444443
No 249
>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber}
Probab=30.31 E-value=1.5e+02 Score=26.99 Aligned_cols=28 Identities=7% Similarity=0.140 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 257 LNELETQAGQLRAEHSSLLKGLTDVNQK 284 (308)
Q Consensus 257 l~eLE~qV~~Le~EN~~L~~el~~L~qk 284 (308)
+.+|+.++..|+.+...+..++..+..+
T Consensus 228 l~~l~~~i~~l~~~l~~~~~~l~~~~~~ 255 (357)
T 3rrk_A 228 AARMKERARLAPEELVGIREEVARLSRE 255 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444444444333
No 250
>3mud_A DNA repair protein XRCC4, tropomyosin alpha-1 CHA; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: DNA; 2.20A {Homo sapiens} PDB: 3sr2_A*
Probab=29.24 E-value=2.1e+02 Score=24.92 Aligned_cols=13 Identities=15% Similarity=0.422 Sum_probs=7.8
Q ss_pred CCChHHHHHHHHh
Q 021757 108 PVDSDEYRAYLKT 120 (308)
Q Consensus 108 ~~dp~~y~a~Lk~ 120 (308)
.++.+.|=.-|++
T Consensus 63 ~me~e~Yv~el~k 75 (175)
T 3mud_A 63 AMEKGKYVGELRK 75 (175)
T ss_dssp TCCHHHHHHHHHH
T ss_pred cCcHHHHHHHHHH
Confidence 4566666666654
No 251
>3he4_A Synzip6; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=29.12 E-value=83 Score=22.22 Aligned_cols=32 Identities=16% Similarity=0.333 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 258 NELETQAGQLRAEHSSLLKGLTDVNQKYDESA 289 (308)
Q Consensus 258 ~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~ 289 (308)
..||.-|..|+..|..|.+.+..|...+..|+
T Consensus 20 aklenivarlendnanlekdianlekdianle 51 (56)
T 3he4_A 20 AKLENIVARLENDNANLEKDIANLEKDIANLE 51 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Confidence 45666677777777777776666555544443
No 252
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=28.94 E-value=2e+02 Score=22.18 Aligned_cols=39 Identities=23% Similarity=0.265 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 268 RAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 268 e~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
+.+...|+.++..+......+..|-..|..++..|+.||
T Consensus 55 e~~i~~Lr~~i~~~~~ek~~l~~e~dnl~~~~~~~k~KL 93 (93)
T 3s4r_A 55 EEEMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKL 93 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 445555555666665555566666666777777777664
No 253
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=28.13 E-value=2e+02 Score=26.44 Aligned_cols=75 Identities=15% Similarity=0.184 Sum_probs=52.2
Q ss_pred CchHHHHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 229 DSVDDKRARRMLSNRESARRSRR-RKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLR 303 (308)
Q Consensus 229 d~~e~KR~RR~lsNReSArRSR~-RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lr 303 (308)
.....|+++.-+-++.--=--|+ ==...+.++..+++.|..--..+..+|..|.+.=..|+.+-..++.+++-++
T Consensus 150 Sl~~Lkk~~~~i~~~LelL~IRK~ma~sEI~EID~KI~~L~~mR~~vl~RLA~lEqdEl~LE~eL~~V~~Rief~q 225 (242)
T 3uux_B 150 SPSALKSFSQTLVNSLEFLNIQKNSTLSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLLLEDNLKQIDDRLDFLE 225 (242)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 34566776654433322222111 1235688889999999998888999999888888888888888888877664
No 254
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=27.66 E-value=1.7e+02 Score=27.67 Aligned_cols=21 Identities=14% Similarity=0.036 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 021757 264 AGQLRAEHSSLLKGLTDVNQK 284 (308)
Q Consensus 264 V~~Le~EN~~L~~el~~L~qk 284 (308)
+..|+.....+..+|..|+++
T Consensus 28 i~~L~~~l~~~~~~i~~l~~~ 48 (323)
T 1lwu_C 28 IQELSEMWRVNQQFVTRLQQQ 48 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333333333
No 255
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=27.40 E-value=1.9e+02 Score=28.66 Aligned_cols=6 Identities=17% Similarity=0.512 Sum_probs=0.0
Q ss_pred hHHHHH
Q 021757 111 SDEYRA 116 (308)
Q Consensus 111 p~~y~a 116 (308)
..-|++
T Consensus 42 ~~~~~~ 47 (464)
T 1m1j_B 42 GTGYQP 47 (464)
T ss_dssp ------
T ss_pred CCCcCC
Confidence 334443
No 256
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=27.36 E-value=1.4e+02 Score=22.89 Aligned_cols=19 Identities=16% Similarity=0.179 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 021757 260 LETQAGQLRAEHSSLLKGL 278 (308)
Q Consensus 260 LE~qV~~Le~EN~~L~~el 278 (308)
|+.+++.++.+...|..++
T Consensus 75 L~~~~e~ie~~i~~le~~~ 93 (117)
T 2zqm_A 75 LKEKIETLEVRLNALERQE 93 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333
No 257
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=27.13 E-value=1.3e+02 Score=19.33 Aligned_cols=26 Identities=23% Similarity=0.280 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 259 ELETQAGQLRAEHSSLLKGLTDVNQK 284 (308)
Q Consensus 259 eLE~qV~~Le~EN~~L~~el~~L~qk 284 (308)
.||..+..|..-.+.|.+++..|...
T Consensus 3 rlee~~r~l~~ivq~lq~r~drle~t 28 (32)
T 2akf_A 3 RLEEDVRNLNAIVQKLQERLDRLEET 28 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666666666666666666655443
No 258
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=26.95 E-value=2.4e+02 Score=22.48 Aligned_cols=33 Identities=9% Similarity=0.062 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 267 LRAEHSSLLKGLTDVNQKYDESAVNNRILKADI 299 (308)
Q Consensus 267 Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l 299 (308)
++.+...|++.+....-....|+.+-..|+.+|
T Consensus 67 ~E~di~~lrK~lD~~~l~r~dLE~~iesL~eEl 99 (119)
T 3ol1_A 67 AENTLQSFRQDVDNASLARLDLERKVESLQEEI 99 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHH
Confidence 344444455444443333333333333343333
No 259
>3ljm_A Coil Ser L9C; de novo design, three stranded coiled coil, APO, de novo Pro; 1.36A {Synthetic} PDB: 2jgo_A 1cos_A 3h5g_A 3h5f_A 3pbj_A 2x6p_C 1coi_A
Probab=26.90 E-value=1.2e+02 Score=19.10 Aligned_cols=23 Identities=26% Similarity=0.348 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 021757 258 NELETQAGQLRAEHSSLLKGLTD 280 (308)
Q Consensus 258 ~eLE~qV~~Le~EN~~L~~el~~ 280 (308)
+.||.+...|+...+.|.++++.
T Consensus 4 ealekkcaalesklqalekklea 26 (31)
T 3ljm_A 4 EALEKKCAALESKLQALEKKLEA 26 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555555555444444443
No 260
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=26.76 E-value=1.9e+02 Score=27.29 Aligned_cols=25 Identities=20% Similarity=0.135 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 258 NELETQAGQLRAEHSSLLKGLTDVN 282 (308)
Q Consensus 258 ~eLE~qV~~Le~EN~~L~~el~~L~ 282 (308)
..|+.++..++.....|..++..|.
T Consensus 29 ~~L~~~l~~~~~~i~~l~~~i~~l~ 53 (323)
T 1lwu_C 29 QELSEMWRVNQQFVTRLQQQLVDIR 53 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333344444333333
No 261
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=26.50 E-value=2e+02 Score=28.64 Aligned_cols=23 Identities=4% Similarity=0.030 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 021757 277 GLTDVNQKYDESAVNNRILKADI 299 (308)
Q Consensus 277 el~~L~qk~~~l~~ENr~Lra~l 299 (308)
+...|.+++..++.+-..|..++
T Consensus 79 ~~~~l~~~i~~le~~~~~~~~~~ 101 (485)
T 3qne_A 79 EKEKLSNEKKEIIEKEAEADKNL 101 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333333
No 262
>1grj_A GREA protein; transcript elongation factor, transcript cleavage factor, transcription regulation; 2.20A {Escherichia coli} SCOP: a.2.1.1 d.26.1.2
Probab=26.24 E-value=2.8e+02 Score=22.99 Aligned_cols=49 Identities=12% Similarity=0.321 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 258 NELETQAGQLRA-EHSSLLKGLTDVN--------QKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 258 ~eLE~qV~~Le~-EN~~L~~el~~L~--------qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
+.|+.++..|+. +...+...+...+ ..|+....+-+.+..++..|+.+|
T Consensus 12 ~~L~~El~~L~~~~rp~i~~~i~~A~~~gDlsENaeY~aak~~q~~~e~ri~~Le~~L 69 (158)
T 1grj_A 12 EKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKL 69 (158)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHHTTCCGGGCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccchhhHhhHHHHHhcccccccchhhhHHHHHHHHHHHHHHHHHHH
Confidence 445555555544 3333444443332 456666666677777777777665
No 263
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=26.14 E-value=1.9e+02 Score=28.31 Aligned_cols=45 Identities=16% Similarity=0.228 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADI 299 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l 299 (308)
+|.++||.++..|+.....-...|..|+.-+..+..+=..|..+|
T Consensus 113 e~s~eLe~~i~~lk~~V~~q~~~ir~Lq~~l~~q~~kiqRLE~~I 157 (390)
T 1deq_A 113 QINEDLRSRIEILRRKVIEQVQRINLLQKNVRDQLVDMKRLEVDI 157 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566666666655444333344444444444444444444333
No 264
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=25.96 E-value=2.2e+02 Score=21.75 Aligned_cols=55 Identities=31% Similarity=0.364 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 251 RRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAK 305 (308)
Q Consensus 251 ~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrak 305 (308)
...++.|+-|..--..|..=-+.|..-++.|.++...+...=..|+.+.+.|..-
T Consensus 21 ~q~qaEl~sLrrT~~EL~~G~~KL~~mi~~l~~E~~~l~~ni~~lk~K~~EL~~~ 75 (78)
T 3iv1_A 21 DRAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNIELLKKKDEELSSA 75 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777777777788888888888888888888888888888888888887653
No 265
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=25.87 E-value=76 Score=30.81 Aligned_cols=33 Identities=15% Similarity=0.071 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDE 287 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~ 287 (308)
+.+++++.++..+......|..+...|+.+...
T Consensus 25 ~~i~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~ 57 (405)
T 4b4t_J 25 QKIQETELKIRSKTENVRRLEAQRNALNDKVRF 57 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555444444444444444433333
No 266
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=25.83 E-value=1.8e+02 Score=23.66 Aligned_cols=33 Identities=9% Similarity=0.054 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDE 287 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~ 287 (308)
+++++|+.++..|+.....|...+....+....
T Consensus 88 ~~~~~l~~~i~~L~~~~~~L~~~i~~~~~~~~~ 120 (142)
T 3gp4_A 88 KQRIELKNRIDVMQEALDRLDFKIDNYDTHLIP 120 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556666666655555555555544444333
No 267
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=25.81 E-value=2.3e+02 Score=21.96 Aligned_cols=8 Identities=38% Similarity=0.530 Sum_probs=3.4
Q ss_pred hhHHHHHH
Q 021757 242 NRESARRS 249 (308)
Q Consensus 242 NReSArRS 249 (308)
-||+|+.-
T Consensus 24 KrEaA~Ee 31 (84)
T 1gmj_A 24 KREQAEEE 31 (84)
T ss_dssp HHHHHHHH
T ss_pred cHHHHhHH
Confidence 34444443
No 268
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=25.76 E-value=1.4e+02 Score=24.13 Aligned_cols=18 Identities=17% Similarity=0.207 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 021757 263 QAGQLRAEHSSLLKGLTD 280 (308)
Q Consensus 263 qV~~Le~EN~~L~~el~~ 280 (308)
++..|..+...|+..+..
T Consensus 19 ei~~L~~ei~eLk~~ve~ 36 (106)
T 4e61_A 19 TIGSLNEEIEQYKGTVST 36 (106)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333333333333333333
No 269
>2l5g_A GPS2 protein, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=25.18 E-value=80 Score=21.22 Aligned_cols=20 Identities=25% Similarity=0.320 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSL 274 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L 274 (308)
..+..|+.++..|+.|...|
T Consensus 15 eQi~~l~~kl~~LkeEKHQL 34 (38)
T 2l5g_A 15 EQILKLEEKLLALQEEKHQL 34 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34444444555554444444
No 270
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=25.10 E-value=5.1e+02 Score=25.66 Aligned_cols=17 Identities=6% Similarity=0.063 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHHHHH
Q 021757 288 SAVNNRILKADIETLRA 304 (308)
Q Consensus 288 l~~ENr~Lra~l~~Lra 304 (308)
+..+=+.|+.+|..|..
T Consensus 76 l~~~~~~l~~~i~~le~ 92 (485)
T 3qne_A 76 LIAEKEKLSNEKKEIIE 92 (485)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33334444444444433
No 271
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=24.90 E-value=2.2e+02 Score=21.29 Aligned_cols=49 Identities=14% Similarity=0.141 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 249 SRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKA 297 (308)
Q Consensus 249 SR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra 297 (308)
-|...+..+..||.++..++.+-.....+...|-.-...|..|=...+.
T Consensus 6 e~~~~~~~i~~lE~eL~~~r~e~~~ql~EYq~LlniKl~Le~EIatYRk 54 (74)
T 2xv5_A 6 ERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRK 54 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556667788888888888888887777777776666667766555443
No 272
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=24.48 E-value=2.2e+02 Score=21.11 Aligned_cols=47 Identities=19% Similarity=0.209 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 252 RKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKAD 298 (308)
Q Consensus 252 RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~ 298 (308)
.-...+.+.+.+...++.+...|.+++..|...+..+...=.....+
T Consensus 24 ~~e~~l~~~e~~~~~~E~ev~~L~kKiq~lE~eld~~ee~l~~a~~k 70 (81)
T 1ic2_A 24 QAEADKKAAEERSKQLEDELVALQKKLKGTEDELDKYSESLKDAQEK 70 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344555555555555555555555555555555544443333333
No 273
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=23.96 E-value=2.8e+02 Score=27.86 Aligned_cols=47 Identities=17% Similarity=0.263 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIET 301 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~ 301 (308)
+|.++||.++.-|+.....-...|..|+.-+..+..+=..|...|..
T Consensus 111 e~S~eLe~ri~yIK~kVd~qi~~IrvLq~~l~~q~skIQRLE~dI~~ 157 (491)
T 1m1j_A 111 HVSTELRRRIVTLKQRVATQVNRIKALQNSIQEQVVEMKRLEVDIDI 157 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667777777766654443366666666666666655555555543
No 274
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=23.85 E-value=1.9e+02 Score=25.81 Aligned_cols=25 Identities=16% Similarity=0.307 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 257 LNELETQAGQLRAEHSSLLKGLTDV 281 (308)
Q Consensus 257 l~eLE~qV~~Le~EN~~L~~el~~L 281 (308)
+..|+.++..|+.....|...+..+
T Consensus 68 l~~l~~e~~el~d~~lR~~AEfeN~ 92 (213)
T 4ani_A 68 IAELEAKLSEMEHRYLRLYADFENF 92 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444333333333333
No 275
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=23.74 E-value=2.1e+02 Score=24.18 Aligned_cols=15 Identities=13% Similarity=0.224 Sum_probs=6.4
Q ss_pred HHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRA 269 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~ 269 (308)
++++++..++.-+..
T Consensus 89 kdlee~r~~l~P~~~ 103 (185)
T 3r2p_A 89 KDLEEVKAKVQPYLD 103 (185)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHH
Confidence 344444444444333
No 276
>3tq7_B Microtubule-associated protein RP/EB family membe; CAP-Gly domain, protein-protein interaction, microtubule BIN cytoskeleton, protein binding; 2.30A {Homo sapiens} SCOP: a.245.1.1
Probab=23.55 E-value=1.6e+02 Score=22.69 Aligned_cols=46 Identities=20% Similarity=0.228 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIE 300 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~ 300 (308)
+.+.+|...|..|+.|..-...+|..+.-=|+....++..+..+|.
T Consensus 8 ~ei~eLk~~ve~lEkERDFYF~KLRdIEiLcQ~~e~~~~~~~~~I~ 53 (82)
T 3tq7_B 8 QQLVDLKLTVDGLEKERDFYFSKLRDIELICQEHESENSPVISGII 53 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----CHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHH
Confidence 4577888888888888888777777776666665555544554443
No 277
>2nrj_A HBL B protein; enterotoxin, hemolysis, transmembrane, structural genomics, PSI-2, protein structure initiative; 2.03A {Bacillus cereus} SCOP: h.4.4.2
Probab=23.40 E-value=1.9e+02 Score=27.10 Aligned_cols=54 Identities=11% Similarity=0.087 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHH---HHHHHHHHHHHHHHHhC
Q 021757 254 QAHLNELETQAGQLRAEHSSLLKGLTDVNQKYD---------------ESAV---NNRILKADIETLRAKKF 307 (308)
Q Consensus 254 k~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~---------------~l~~---ENr~Lra~l~~Lrakvk 307 (308)
+..|+.|..++...+.+-..+...|...+.++. .|.. +-..|+.+|+.|+..++
T Consensus 122 ~~~L~~L~~~i~~~q~~~~~~~~~L~~F~~~l~~d~~~f~~~~~~l~~~L~~~~~~I~~Lq~eI~~l~~~I~ 193 (346)
T 2nrj_A 122 KEGITDLRGEIQQNQKYAQQLIEELTKLRDSIGHDVRAFGSNKELLQSILKNQGADVDADQKRLEEVLGSVN 193 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHhHHHHHHHHHhcccccHHHHHHHHHHHHHHHH
Confidence 455666666666666666666666666655542 1222 22356777777766553
No 278
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=22.68 E-value=2.2e+02 Score=20.54 Aligned_cols=31 Identities=6% Similarity=0.155 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021757 276 KGLTDVNQKYDESAVNNRILKADIETLRAKK 306 (308)
Q Consensus 276 ~el~~L~qk~~~l~~ENr~Lra~l~~Lrakv 306 (308)
.....-...+.....|-..|+-.|+.|+..|
T Consensus 42 ~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el 72 (77)
T 3trt_A 42 EAANRNNDALRQAKQESTEYRRQVQSLTMEV 72 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333444455566666666666666543
No 279
>2ve7_A Kinetochore protein HEC1, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_C*
Probab=22.45 E-value=1.1e+02 Score=28.39 Aligned_cols=51 Identities=16% Similarity=0.170 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 254 QAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 254 k~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
.++++.|+.+.+.|+.|.+.|.++...+.+ ......+.|+..+.-.+..|.
T Consensus 184 ~~eie~L~~~~~~L~eEi~~Le~~~e~~~k---~n~~rl~~Lqk~~~~~~~~LG 234 (315)
T 2ve7_A 184 AFKLESLEAKNRALNEQIARLEQERSTANK---ANAERLKRLQKSADLYKDRLG 234 (315)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHTTTTTHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhh---hhHHHHHHHHHHHHHHHHHcc
Confidence 456778888888888888877666655544 234445566666655555544
No 280
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=22.39 E-value=1.6e+02 Score=18.81 Aligned_cols=8 Identities=38% Similarity=0.588 Sum_probs=2.9
Q ss_pred HHHHHHHH
Q 021757 267 LRAEHSSL 274 (308)
Q Consensus 267 Le~EN~~L 274 (308)
|+.|...|
T Consensus 7 lkqeiaal 14 (33)
T 4dzn_A 7 LKQEIAAL 14 (33)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 281
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=22.22 E-value=71 Score=32.14 Aligned_cols=48 Identities=19% Similarity=0.144 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 257 LNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRA 304 (308)
Q Consensus 257 l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lra 304 (308)
..+|+.++.+++.+.......|....+....|..+-+....+-+.|..
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~e~~~~~~~e~~~l~~ 384 (575)
T 2i1j_A 337 QQEYQDRLRQMQEEMERSQANLLEAQDMILRLEEQLRQLQAAKEELEQ 384 (575)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC--------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567778888888877777777766665555555555555544444443
No 282
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=22.19 E-value=4.9e+02 Score=24.42 Aligned_cols=63 Identities=17% Similarity=0.095 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH------HH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 245 SARRSRRRKQAHLNELETQAGQLRA------EH--SSLLKGLTDVNQKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 245 SArRSR~RKk~~l~eLE~qV~~Le~------EN--~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
-+++.=..|.+.++.|+..+..-+. +. -.-..-+.++.++++.+.+.-+.|.++.+.|.++|.
T Consensus 320 ~~~~~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~q~~~~~~~~~ 390 (406)
T 4dyl_A 320 VATEMVFRRQEMVTQLQQELRNEEENTHPRERVQLLGKRQVLQEALQGLQVALCSQAKLQAQQELLQTKLE 390 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCcchHHHHHhHHhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 3455556677777777777665422 11 112334567778888999999999999999998873
No 283
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=22.06 E-value=2.4e+02 Score=25.60 Aligned_cols=62 Identities=18% Similarity=0.233 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 021757 243 RESARRSRRRKQAHLNELETQAGQLRAEHSS-LLKGLTDVNQKYDESAVNNRILKADIETLRAKKF 307 (308)
Q Consensus 243 ReSArRSR~RKk~~l~eLE~qV~~Le~EN~~-L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrakvk 307 (308)
...|...|.|=..++++|..++..+-.+... |...+..|+..+..+. ..|+++++.++++|.
T Consensus 164 ~~~a~~L~~~l~~~~eeLr~~L~p~ae~lr~~l~~~~e~l~~~l~~~~---~~~~qq~e~f~~~~~ 226 (273)
T 3s84_A 164 KKNAEELKARISASAEELRQRLAPLAEDVRGNLRGNTEGLQKSLAELG---GHLDQQVEEFRRRVE 226 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSCHHHHHHHHHHHH---HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH---HHHHHHHHHHHHHhH
No 284
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=21.64 E-value=2.7e+02 Score=21.20 Aligned_cols=39 Identities=5% Similarity=0.193 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 253 KQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVN 291 (308)
Q Consensus 253 Kk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~E 291 (308)
+...+...+.++..++.+...|..++..+..++..+..+
T Consensus 62 ~~~~i~~~~~~l~~l~~~i~~l~~~i~~l~~~~~~l~~~ 100 (112)
T 1l8d_A 62 REELLSKYHLDLNNSKNTLAKLIDRKSELERELRRIDME 100 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 285
>2aze_B Transcription factor E2F1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.2
Probab=21.58 E-value=2.2e+02 Score=22.49 Aligned_cols=34 Identities=15% Similarity=0.077 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 257 LNELETQAGQLRAEHSSLLKGLTDVNQKYDESAV 290 (308)
Q Consensus 257 l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ 290 (308)
+..|..++..|+.+-+.|-..+..+++++..+..
T Consensus 8 ~~~Lk~El~~L~~~E~~LD~~i~~~~~~l~~lte 41 (106)
T 2aze_B 8 LEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSE 41 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4456666666666666666677766666666664
No 286
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=21.50 E-value=3.2e+02 Score=21.99 Aligned_cols=22 Identities=14% Similarity=0.258 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 021757 257 LNELETQAGQLRAEHSSLLKGL 278 (308)
Q Consensus 257 l~eLE~qV~~Le~EN~~L~~el 278 (308)
+.+|...+..|+.|..-...+|
T Consensus 27 i~eLk~~ve~lEkERDFYF~KL 48 (106)
T 4e61_A 27 IEQYKGTVSTLEIEREFYFNKL 48 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444333333
No 287
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9
Probab=21.25 E-value=98 Score=24.80 Aligned_cols=13 Identities=8% Similarity=0.130 Sum_probs=5.0
Q ss_pred HHHHHHHHHHHHH
Q 021757 267 LRAEHSSLLKGLT 279 (308)
Q Consensus 267 Le~EN~~L~~el~ 279 (308)
...++..|+.++.
T Consensus 94 e~~~~~~L~~~i~ 106 (117)
T 3kin_B 94 EKEKNKALKSVIQ 106 (117)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333333433333
No 288
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=21.23 E-value=3.2e+02 Score=21.85 Aligned_cols=34 Identities=9% Similarity=0.221 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 256 HLNELETQAGQLRAEHSSLLKGLTDVNQKYDESA 289 (308)
Q Consensus 256 ~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~ 289 (308)
.++.|..++..|+.........+.++..+...|.
T Consensus 19 e~~~l~~~~~el~~~l~~~~~~~~e~g~~~~~lq 52 (125)
T 1joc_A 19 EIEKLQTKVLELQRKLDNTTAAVQELGRENQSLQ 52 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 4555555555555444443333334433333333
No 289
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=20.96 E-value=1.9e+02 Score=19.86 Aligned_cols=31 Identities=13% Similarity=0.209 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 259 ELETQAGQLRAEHSSLLKGLTDVNQKYDESA 289 (308)
Q Consensus 259 eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~ 289 (308)
+|-+++...-.|...-..+++.|+.+...|.
T Consensus 6 ~l~qkI~kVdrEI~Kte~kI~~lqkKlkeLe 36 (42)
T 2l5g_B 6 ELIQNMDRVDREITMVEQQISKLKKKQQQLE 36 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555555555555555555554443
No 290
>3fx0_A NF-kappa-B essential modulator; coiled-coil, coiled coil, cytoplasm, disease mutation, ectodermal dysplasia, HOST-virus interaction; 3.20A {Homo sapiens}
Probab=20.91 E-value=43 Score=26.78 Aligned_cols=52 Identities=17% Similarity=0.149 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 251 RRKQAHLNELETQAGQLR---AEHSSLLKGLTDVNQKYDESAVNNRILKADIETL 302 (308)
Q Consensus 251 ~RKk~~l~eLE~qV~~Le---~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~L 302 (308)
..|+..+.+|..++.+++ ..+..|..++......|..-...-..|..+.+.|
T Consensus 34 ~~KQ~~ideLKe~i~q~~~~~E~i~vL~aQ~~iY~~DF~aERaaREk~~~EKe~L 88 (96)
T 3fx0_A 34 VAKQEVIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERQAREKLAEKKELL 88 (96)
T ss_dssp TTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 346667777777766666 4555567777777777766655555444443333
No 291
>3tq2_A KE1; parallel three helix bundle, de novo protein; 1.10A {Synthetic}
Probab=20.87 E-value=1.8e+02 Score=18.87 Aligned_cols=30 Identities=13% Similarity=0.241 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 273 SLLKGLTDVNQKYDESAVNNRILKADIETL 302 (308)
Q Consensus 273 ~L~~el~~L~qk~~~l~~ENr~Lra~l~~L 302 (308)
.|..++..|++++..++-.-..|+.++..|
T Consensus 5 alkekvsalkeqflmlmfkvsalkekvsal 34 (36)
T 3tq2_A 5 ALKEKVSALKEQFLMLMFKVSALKEKVSAL 34 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344455555555656665555666555554
No 292
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=20.75 E-value=3.7e+02 Score=27.08 Aligned_cols=31 Identities=19% Similarity=0.327 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 257 LNELETQAGQLRAEHSSLLKGLTDVNQKYDE 287 (308)
Q Consensus 257 l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~ 287 (308)
+.++..+-..++.||..+++++...+.+|..
T Consensus 36 ~ae~~a~n~~i~aeNeaikkrNa~aka~Ye~ 66 (497)
T 3iox_A 36 VAANNAANAALTAENTAIKKRNADAKADYEA 66 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555666666666666655555444
No 293
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=20.72 E-value=3.1e+02 Score=21.54 Aligned_cols=31 Identities=16% Similarity=0.257 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 258 NELETQAGQLRAEHSSLLKGLTDVNQKYDES 288 (308)
Q Consensus 258 ~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l 288 (308)
+.|+.++..|+..-..+..+++.+.+....+
T Consensus 98 ~~l~~~~~~l~~~l~~l~~~i~~~~~~l~~~ 128 (133)
T 1fxk_C 98 NELESTLQKMGENLRAITDIMMKLSPQAEEL 128 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444555444444555554444444333
No 294
>3q4f_C DNA repair protein XRCC4; DSB repair, nuclear, recombination-recombination complex, DN protein-protein binding complex; HET: DNA; 5.50A {Homo sapiens}
Probab=20.48 E-value=1.7e+02 Score=25.93 Aligned_cols=23 Identities=22% Similarity=0.394 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 021757 255 AHLNELETQAGQLRAEHSSLLKG 277 (308)
Q Consensus 255 ~~l~eLE~qV~~Le~EN~~L~~e 277 (308)
..+.+|+.+..+|+.||..|..+
T Consensus 161 ~~i~~L~a~N~hLqkENeRL~~e 183 (186)
T 3q4f_C 161 DTIAENQAKNEHLQKENERLLRD 183 (186)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455555555555555555443
No 295
>2xnx_M M protein, M1-BC1; cell adhesion, virulence factor, streptococcal toxic shock S; 3.30A {Streptococcus pyogenes}
Probab=20.16 E-value=4e+02 Score=22.61 Aligned_cols=9 Identities=22% Similarity=0.228 Sum_probs=3.5
Q ss_pred HHHHHHHHH
Q 021757 294 ILKADIETL 302 (308)
Q Consensus 294 ~Lra~l~~L 302 (308)
.|.++...|
T Consensus 98 ~LeAE~aKL 106 (146)
T 2xnx_M 98 QLTIEKAKL 106 (146)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 344443333
No 296
>1avy_A Fibritin, gpwac M; bacteriophage T4, structural protein, chaperone, bacteriopha assembly, protein folding; 1.85A {Enterobacteria phage T4} SCOP: h.1.17.1
Probab=20.05 E-value=2.5e+02 Score=21.27 Aligned_cols=33 Identities=12% Similarity=0.243 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 257 LNELETQAGQLRAEHSSLLKGLTDVNQKYDESA 289 (308)
Q Consensus 257 l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~ 289 (308)
++.||..+..+..|...+...+..++.+.+.|+
T Consensus 10 Vk~~eT~iaa~~~ev~t~~~~l~~~e~~vqaL~ 42 (74)
T 1avy_A 10 IKAIETDIASVRQEVNTAKGNISSLQGDVQALQ 42 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccccchhhhheeeccccchhhhhhhhhHHHH
Confidence 455666666666666666666666555555554
No 297
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=20.01 E-value=3.1e+02 Score=21.20 Aligned_cols=65 Identities=11% Similarity=0.213 Sum_probs=38.3
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021757 241 SNRESARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDESAVNNRILKADIETLRAK 305 (308)
Q Consensus 241 sNReSArRSR~RKk~~l~eLE~qV~~Le~EN~~L~~el~~L~qk~~~l~~ENr~Lra~l~~Lrak 305 (308)
..=+..-+-|.+=...|..|+.+...|..+-..+..+.+.+..+...+..+-..|..++.--..+
T Consensus 25 ~eL~~lEke~~~l~~el~~le~E~~~L~~eE~~~w~eyn~~~~ql~e~~dE~~Sl~~q~~~~~~q 89 (96)
T 3q8t_A 25 QELEDVEKNRKVVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLELDDELKSVENQMRYAQMQ 89 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344444444555556666666666666666666666666777777777777776655444
Done!