Query 021758
Match_columns 308
No_of_seqs 217 out of 1495
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 08:52:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021758.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021758hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3c37_A Peptidase, M48 family; 99.9 3.9E-22 1.3E-26 182.6 10.3 105 122-308 3-108 (253)
2 3cqb_A Probable protease HTPX 99.2 1.5E-11 5.1E-16 99.4 7.2 44 264-308 44-91 (107)
3 4aw6_A CAAX prenyl protease 1 97.4 9.8E-05 3.3E-09 73.9 4.5 44 264-308 250-337 (482)
4 1r1h_A Neprilysin; enkephalina 28.0 13 0.00045 37.9 0.2 36 273-308 487-532 (696)
5 3dwb_A ECE-1, endothelin-conve 26.3 20 0.00069 36.5 1.2 37 272-308 463-509 (670)
6 3u53_A BIS(5'-nucleosyl)-tetra 25.4 34 0.0012 27.1 2.2 27 259-285 19-46 (155)
7 3zuk_A Endopeptidase, peptidas 20.6 21 0.00071 37.0 -0.0 36 273-308 486-531 (699)
8 3f6a_A Hydrolase, nudix family 14.7 56 0.0019 25.8 1.2 22 265-286 18-39 (159)
9 3son_A Hypothetical nudix hydr 13.3 76 0.0026 24.5 1.6 24 262-285 18-41 (149)
10 2b67_A COG0778: nitroreductase 13.2 2.1E+02 0.0074 23.2 4.5 35 234-273 23-57 (204)
No 1
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=99.86 E-value=3.9e-22 Score=182.64 Aligned_cols=105 Identities=26% Similarity=0.485 Sum_probs=85.4
Q ss_pred cCCccchhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCCCChh-hHHHHHHHHHHHHHHHhcccccccccccCCCCcccc
Q 021758 122 VPYTKRTHFVLLSKAVERQLGESQFQQMKAAFKGKILPAIHPD-SVRVRLIAKDIIEALQRGLKHETVWSDMGYASTETD 200 (308)
Q Consensus 122 vP~TgR~rfillS~~~E~~LGeq~y~qil~e~~~kiLP~~hP~-s~rVr~Ia~rIi~a~~~~l~~e~~~~~~gy~~~~~~ 200 (308)
+|.|||++++++|+++|.++|++.++++.++++ |..+|. ..+|++|++++...+
T Consensus 3 ~~~tgr~~~~~~s~~~e~~lg~~~~~~~~~~~~----~~~d~~l~~~l~~l~~~l~~~~--------------------- 57 (253)
T 3c37_A 3 TSMTDIKGFNMISIEQEKELGNKFAVEIEKQQQ----PVNDPEVQRYVDKVGKRLLSGA--------------------- 57 (253)
T ss_dssp ------CCCCCCCHHHHHHHHHHHHHHHHTTCC----BCCCHHHHHHHHHHHHHHHHTS---------------------
T ss_pred cCCCCchhhccCCHHHHHHHHHHHHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHhC---------------------
Confidence 477999999999999999999999999988754 344664 668888888775421
Q ss_pred ccccchhhhhHHhhhhcccccccccCcccccccccchHHHHHHhhhcccccccccccCCCCCCeEEEEEeCCCCceeEeC
Q 021758 201 FVNEGRAARDTLRALSENSERGKTEGKWHQEDEILDDKWVQQSRKKGQEKGLQSATSHLDGLNWEVLVVNEPVINAFCLP 280 (308)
Q Consensus 201 ~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~l~~D~~v~~~~~~g~~~~~~~~~s~l~~~~w~v~Vv~~~~~NAfalP 280 (308)
..+..+|+++|++++.+||||+|
T Consensus 58 ---------------------------------------------------------~~~~~~~~v~v~~~~~~NAfa~~ 80 (253)
T 3c37_A 58 ---------------------------------------------------------RAVEFDYVFKVVKDDSVNAFAIP 80 (253)
T ss_dssp ---------------------------------------------------------SCCCSCCEEEEECCCSCCEEEET
T ss_pred ---------------------------------------------------------CCCCCCeEEEEEeCCCCCeeEcC
Confidence 11356899999999999999999
Q ss_pred CCeEEEcHhHhhccCCHHHHHHHHhcCC
Q 021758 281 GGKIVVFTGLLEHFRTDAEIATIIGHEV 308 (308)
Q Consensus 281 GG~I~V~tGLl~~~~nddeLAaVLaHEi 308 (308)
||+|+|++|||+.++|+|||++||||||
T Consensus 81 gg~I~v~~gLl~~l~~~~ELaaVLaHEl 108 (253)
T 3c37_A 81 GGRVYVHTGLLKAADNETELAGVLAHEI 108 (253)
T ss_dssp TTEEEEEHHHHHHCSSHHHHHHHHHHHH
T ss_pred CCeEEeeHHHHhhCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999996
No 2
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.23 E-value=1.5e-11 Score=99.45 Aligned_cols=44 Identities=34% Similarity=0.465 Sum_probs=40.9
Q ss_pred eEEEEEeCCCCceeEeCC----CeEEEcHhHhhccCCHHHHHHHHhcCC
Q 021758 264 WEVLVVNEPVINAFCLPG----GKIVVFTGLLEHFRTDAEIATIIGHEV 308 (308)
Q Consensus 264 w~v~Vv~~~~~NAfalPG----G~I~V~tGLl~~~~nddeLAaVLaHEi 308 (308)
++++|++++.+||||+|+ +.|+|++||++.+ |+|||++|||||+
T Consensus 44 ~~v~v~~~~~~NAf~~g~~~~~~~i~v~~gLl~~l-~~~El~aVlaHEl 91 (107)
T 3cqb_A 44 PTVAIYDSADINAFATGAKRDDSLVAVSTGLLHNM-TRDEAEAVLAHEV 91 (107)
T ss_dssp CEEEEECCSSEEEEEECCC--CCEEEEEHHHHHHS-CHHHHHHHHHHHH
T ss_pred CeEEEEECCCcCEEEEecCCCCCEEEEcHHHHhhC-CHHHHHHHHHHHH
Confidence 699999999999999985 4599999999999 9999999999995
No 3
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} PDB: 2ypt_A
Probab=97.39 E-value=9.8e-05 Score=73.86 Aligned_cols=44 Identities=34% Similarity=0.570 Sum_probs=37.3
Q ss_pred eEEEEEe----CCCCceeEeC---CCeEEEcHhHhhc-------------------------------------cCCHHH
Q 021758 264 WEVLVVN----EPVINAFCLP---GGKIVVFTGLLEH-------------------------------------FRTDAE 299 (308)
Q Consensus 264 w~v~Vv~----~~~~NAfalP---GG~I~V~tGLl~~-------------------------------------~~ndde 299 (308)
-+++|++ ++..|||+.. +..|++++.+++. | |+||
T Consensus 250 ~~v~vv~gSkRs~~~NAy~~G~~~~krIVl~dtLl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~E 328 (482)
T 4aw6_A 250 TKVYVVEGSKRSSHSNAYFYGFFKNKRIVLFDTLLEEYSVLNKDIQEDSGMEPRNEEEGNSEEIKAKVKNKKQGC-KNEE 328 (482)
T ss_dssp EEEEEECGGGTBSCCCEEEEESSSCEEEEEEHHHHC------------------------------------CCC-CHHH
T ss_pred CcEEEEeCCCCCCCCceEEEcCCCCcEEEEEchHHHhcccccccccccccccccccccccchhhcccchhhccCC-CHHH
Confidence 5999999 7789999983 3469999999986 5 8999
Q ss_pred HHHHHhcCC
Q 021758 300 IATIIGHEV 308 (308)
Q Consensus 300 LAaVLaHEi 308 (308)
|++|||||+
T Consensus 329 l~aVlaHEl 337 (482)
T 4aw6_A 329 VLAVLGHEL 337 (482)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999995
No 4
>1r1h_A Neprilysin; enkephalinase, glycoprotein, metalloprotease, hydrolase; HET: NAG BIR; 1.95A {Homo sapiens} SCOP: d.92.1.4 PDB: 1dmt_A* 1r1i_A* 1r1j_A* 1y8j_A* 2qpj_A* 2yb9_A*
Probab=28.04 E-value=13 Score=37.86 Aligned_cols=36 Identities=42% Similarity=0.739 Sum_probs=28.2
Q ss_pred CCceeEeCC-CeEEEcHhHhh--ccC-------CHHHHHHHHhcCC
Q 021758 273 VINAFCLPG-GKIVVFTGLLE--HFR-------TDAEIATIIGHEV 308 (308)
Q Consensus 273 ~~NAfalPG-G~I~V~tGLl~--~~~-------nddeLAaVLaHEi 308 (308)
.+|||-.|. ..|++-.|||. ... |=..|.+||||||
T Consensus 487 ~vNA~Y~p~~N~I~~Pa~iLq~Pff~~~~~~a~nyg~iG~vigHEi 532 (696)
T 1r1h_A 487 VVNAFYSSGRNQIVFPAGILQPPFFSAQQSNSLNYGGIGMVIGHEI 532 (696)
T ss_dssp CSCCEEETTTTEEEEEGGGSSTTTCCTTSCHHHHHHTHHHHHHHHH
T ss_pred ceeeEEcCcCCEEEeeHHHhCCcccCccccHHHHhhHHHHHHHHHH
Confidence 599999985 67999999994 222 3456899999996
No 5
>3dwb_A ECE-1, endothelin-converting enzyme 1; protein, disease mutation, glycoprotein, hirschsprung diseas hydrolase, membrane, metal-binding; HET: 5HD RDF; 2.38A {Homo sapiens} SCOP: d.92.1.0
Probab=26.27 E-value=20 Score=36.48 Aligned_cols=37 Identities=32% Similarity=0.700 Sum_probs=28.4
Q ss_pred CCCceeEeCC-CeEEEcHhHhh--ccC-------CHHHHHHHHhcCC
Q 021758 272 PVINAFCLPG-GKIVVFTGLLE--HFR-------TDAEIATIIGHEV 308 (308)
Q Consensus 272 ~~~NAfalPG-G~I~V~tGLl~--~~~-------nddeLAaVLaHEi 308 (308)
..+|||-.|. ..|++-.|||. ..+ |=..|.+||||||
T Consensus 463 ~~vnAyY~p~~N~I~fPa~iLq~Pff~~~~p~a~nyg~iG~vigHEi 509 (670)
T 3dwb_A 463 PMVNAYYSPTKNEIVFPAGILQAPFYTRSSPKALNFGGIGVVVGHEL 509 (670)
T ss_dssp TCSCCEEETTTTEEEEEGGGSSTTTCCTTSCHHHHHHTHHHHHHHHH
T ss_pred ceeEEEeccccccccccHHHcCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 3599999885 67899999985 222 3457899999996
No 6
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=25.35 E-value=34 Score=27.06 Aligned_cols=27 Identities=22% Similarity=0.384 Sum_probs=20.5
Q ss_pred CCCCCeEEEEEeCC-CCceeEeCCCeEE
Q 021758 259 LDGLNWEVLVVNEP-VINAFCLPGGKIV 285 (308)
Q Consensus 259 l~~~~w~v~Vv~~~-~~NAfalPGG~I~ 285 (308)
..+...++.++... ..+-|.+|||+|=
T Consensus 19 ~~n~~~e~LL~~r~~~~~~W~lPgG~ve 46 (155)
T 3u53_A 19 VDNNAIEFLLLQASDGIHHWTPPKGHVE 46 (155)
T ss_dssp SSSCSEEEEEEEESSSSCCEECSEEECC
T ss_pred eeCCCcEEEEEEecCCCCCEECCeeecc
Confidence 45667799998754 4788999999864
No 7
>3zuk_A Endopeptidase, peptidase family M13; hydrolase-inhibitor complex, pathogenicity, phagosome matura; HET: RDF 211 PGE PG4; 2.60A {Mycobacterium tuberculosis}
Probab=20.61 E-value=21 Score=36.95 Aligned_cols=36 Identities=36% Similarity=0.699 Sum_probs=28.3
Q ss_pred CCceeEeCC-CeEEEcHhHhh--ccC-------CHHHHHHHHhcCC
Q 021758 273 VINAFCLPG-GKIVVFTGLLE--HFR-------TDAEIATIIGHEV 308 (308)
Q Consensus 273 ~~NAfalPG-G~I~V~tGLl~--~~~-------nddeLAaVLaHEi 308 (308)
.+|||=.|. ..|++-.|||. ..+ |=..|.+||||||
T Consensus 486 ~vNAyY~p~~N~I~fPa~iLq~Pff~~~~p~a~nyG~iG~vIgHEi 531 (699)
T 3zuk_A 486 TVNAYYNPGMNEIVFPAAILQPPFFDPQADEAANYGGIGAVIGHEI 531 (699)
T ss_dssp CSCCEEEGGGTEEEEEGGGSSTTTCCTTSCHHHHHHTHHHHHHHHH
T ss_pred cceeEEecCcCeEEeeHHhcCCCCCCCccchHHHhHHHHHHHHHHH
Confidence 589998884 77999999986 222 4467899999996
No 8
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=14.67 E-value=56 Score=25.76 Aligned_cols=22 Identities=27% Similarity=0.273 Sum_probs=18.2
Q ss_pred EEEEEeCCCCceeEeCCCeEEE
Q 021758 265 EVLVVNEPVINAFCLPGGKIVV 286 (308)
Q Consensus 265 ~v~Vv~~~~~NAfalPGG~I~V 286 (308)
++.++.....+-|++|||+|=-
T Consensus 18 ~vLL~~r~~~g~w~lPgG~ve~ 39 (159)
T 3f6a_A 18 KVLLHLHKKAKKMLPLGGHIEV 39 (159)
T ss_dssp EEEEEECSSSCCEECEEEECCT
T ss_pred EEEEEEcCCCCeEECCccCccC
Confidence 7888887778899999998753
No 9
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=13.32 E-value=76 Score=24.52 Aligned_cols=24 Identities=13% Similarity=0.149 Sum_probs=19.1
Q ss_pred CCeEEEEEeCCCCceeEeCCCeEE
Q 021758 262 LNWEVLVVNEPVINAFCLPGGKIV 285 (308)
Q Consensus 262 ~~w~v~Vv~~~~~NAfalPGG~I~ 285 (308)
.+.++.++.....+.|.+|||+|=
T Consensus 18 ~~~~vLl~~r~~~g~w~~PgG~ve 41 (149)
T 3son_A 18 ANYQFGVLHRTDADVWQFVAGGGE 41 (149)
T ss_dssp SSEEEEEEEESSSSCEECEEEECC
T ss_pred CCeEEEEEEEcCCCCEeCCccccC
Confidence 356888888766699999999864
No 10
>2b67_A COG0778: nitroreductase; alpha-beta sandwich, FMN binding pocket, structural genomics protein structure initiative; HET: MSE FMN; 2.05A {Streptococcus pneumoniae} SCOP: d.90.1.1
Probab=13.20 E-value=2.1e+02 Score=23.23 Aligned_cols=35 Identities=26% Similarity=0.335 Sum_probs=24.4
Q ss_pred ccchHHHHHHhhhcccccccccccCCCCCCeEEEEEeCCC
Q 021758 234 ILDDKWVQQSRKKGQEKGLQSATSHLDGLNWEVLVVNEPV 273 (308)
Q Consensus 234 l~~D~~v~~~~~~g~~~~~~~~~s~l~~~~w~v~Vv~~~~ 273 (308)
-+++..+++.++.+. ...++....+|+++||.+++
T Consensus 23 ~v~~e~l~~il~aa~-----~APS~~n~Qpw~f~vv~~~~ 57 (204)
T 2b67_A 23 LVDPKDVRTAIEIAT-----LAPSAHNSQPWKFVVVREKN 57 (204)
T ss_dssp CCCHHHHHHHHHHHT-----TSCCGGGCCCEEEEEESSSH
T ss_pred CCCHHHHHHHHHHHH-----hCcCcccCCCeEEEecCChh
Confidence 467777888777542 23344566799999999875
Done!