Query 021762
Match_columns 308
No_of_seqs 141 out of 1126
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 08:56:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021762.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021762hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hcn_A Ferrochelatase, mitocho 100.0 6.3E-58 2.2E-62 443.0 23.2 203 97-304 2-209 (359)
2 1lbq_A Ferrochelatase; rossman 100.0 9E-57 3.1E-61 435.3 23.0 206 96-304 4-214 (362)
3 2h1v_A Ferrochelatase; rossman 100.0 6.9E-49 2.4E-53 372.2 19.5 188 96-304 2-193 (310)
4 2xvy_A Chelatase, putative; me 99.6 1.4E-15 4.9E-20 139.5 13.1 117 175-298 27-158 (269)
5 2xwp_A Sirohydrochlorin cobalt 99.3 1.7E-11 5.8E-16 112.8 14.5 129 163-299 9-150 (264)
6 2jh3_A Ribosomal protein S2-re 99.1 2.1E-11 7.3E-16 121.6 5.0 125 162-293 9-149 (474)
7 3lyh_A Cobalamin (vitamin B12) 99.0 2.5E-09 8.4E-14 87.6 11.7 112 162-280 11-123 (126)
8 1tjn_A Sirohydrochlorin cobalt 99.0 8.3E-10 2.8E-14 94.4 7.1 112 162-281 30-150 (156)
9 2xws_A Sirohydrochlorin cobalt 98.9 1.7E-09 5.7E-14 88.8 7.5 111 162-280 9-128 (133)
10 2xwp_A Sirohydrochlorin cobalt 98.3 4.3E-06 1.5E-10 76.6 11.7 104 163-279 144-257 (264)
11 2xvy_A Chelatase, putative; me 98.1 1.8E-05 6.1E-10 72.1 10.1 105 163-280 153-267 (269)
12 2h1v_A Ferrochelatase; rossman 97.8 0.00011 3.6E-09 69.2 11.2 103 167-279 195-309 (310)
13 3hcn_A Ferrochelatase, mitocho 97.6 0.00051 1.7E-08 66.2 12.4 108 164-280 208-327 (359)
14 1lbq_A Ferrochelatase; rossman 97.4 0.0002 6.7E-09 69.1 6.4 108 164-280 213-328 (362)
15 2jh3_A Ribosomal protein S2-re 96.0 0.0075 2.6E-07 60.1 5.9 100 174-280 155-267 (474)
16 3fdj_A DEGV family protein; GU 54.5 1E+02 0.0036 27.7 10.9 97 199-305 61-169 (278)
17 3jr7_A Uncharacterized EGV fam 53.6 51 0.0018 30.2 8.7 98 199-305 81-190 (298)
18 3fkr_A L-2-keto-3-deoxyarabona 52.0 98 0.0033 28.3 10.4 54 187-244 75-134 (309)
19 2ojp_A DHDPS, dihydrodipicolin 51.3 79 0.0027 28.5 9.5 52 188-243 69-123 (292)
20 4b4o_A Epimerase family protei 51.1 37 0.0013 29.6 7.1 35 99-135 211-247 (298)
21 3pl5_A SMU_165, putative uncha 47.9 1.1E+02 0.0038 28.4 10.1 98 199-305 97-209 (320)
22 3nyi_A FAT acid-binding protei 47.1 84 0.0029 28.6 9.0 98 199-305 66-178 (297)
23 3mxo_A Serine/threonine-protei 46.9 72 0.0025 26.5 8.0 44 165-212 30-75 (202)
24 2ehh_A DHDPS, dihydrodipicolin 46.9 1.6E+02 0.0054 26.6 10.8 53 188-244 68-123 (294)
25 2r8w_A AGR_C_1641P; APC7498, d 46.8 1.1E+02 0.0036 28.4 9.8 54 188-245 102-158 (332)
26 3qze_A DHDPS, dihydrodipicolin 46.6 1.5E+02 0.0052 27.1 10.8 53 188-244 91-146 (314)
27 3o74_A Fructose transport syst 46.3 1.2E+02 0.004 25.4 9.3 52 171-224 16-68 (272)
28 3rpe_A MDAB, modulator of drug 46.2 77 0.0026 27.7 8.3 74 165-244 33-111 (218)
29 3daq_A DHDPS, dihydrodipicolin 45.9 1E+02 0.0036 27.8 9.4 54 187-244 69-125 (292)
30 1uta_A FTSN, MSGA, cell divisi 45.9 14 0.00048 27.0 2.9 47 173-219 20-75 (81)
31 3flu_A DHDPS, dihydrodipicolin 45.7 1.7E+02 0.0058 26.4 10.8 53 188-244 75-130 (297)
32 3cpr_A Dihydrodipicolinate syn 45.6 1.7E+02 0.0058 26.6 10.8 53 188-244 84-139 (304)
33 3rot_A ABC sugar transporter, 45.5 1.1E+02 0.0038 26.3 9.2 13 204-216 76-88 (297)
34 2yxg_A DHDPS, dihydrodipicolin 45.4 1.5E+02 0.0052 26.6 10.4 76 164-244 45-123 (289)
35 3na8_A Putative dihydrodipicol 43.5 1.5E+02 0.0053 27.1 10.3 54 188-245 92-148 (315)
36 3l21_A DHDPS, dihydrodipicolin 43.4 99 0.0034 28.2 8.9 52 187-242 82-136 (304)
37 1xky_A Dihydrodipicolinate syn 43.4 1.7E+02 0.0057 26.6 10.4 53 188-244 80-135 (301)
38 2wkj_A N-acetylneuraminate lya 43.3 1.2E+02 0.0039 27.7 9.3 53 188-244 79-134 (303)
39 1f6k_A N-acetylneuraminate lya 42.8 1.2E+02 0.0042 27.3 9.4 53 188-244 72-127 (293)
40 3si9_A DHDPS, dihydrodipicolin 42.5 1.8E+02 0.0062 26.6 10.6 54 188-245 90-146 (315)
41 1o5k_A DHDPS, dihydrodipicolin 42.2 1.4E+02 0.0047 27.2 9.6 50 189-242 81-133 (306)
42 2rfg_A Dihydrodipicolinate syn 42.0 1.5E+02 0.0051 26.9 9.8 52 189-244 69-123 (297)
43 3d0c_A Dihydrodipicolinate syn 41.4 1.9E+02 0.0064 26.4 10.5 52 188-244 80-134 (314)
44 3m5v_A DHDPS, dihydrodipicolin 41.4 1.5E+02 0.0051 26.9 9.7 52 189-244 77-131 (301)
45 3lub_A Putative creatinine ami 41.1 53 0.0018 29.4 6.5 51 172-222 47-118 (254)
46 3tak_A DHDPS, dihydrodipicolin 40.8 2E+02 0.0069 25.8 10.6 53 188-244 69-124 (291)
47 1x60_A Sporulation-specific N- 40.6 29 0.00098 24.9 3.8 46 173-218 20-74 (79)
48 4emb_A 2,3-bisphosphoglycerate 40.5 61 0.0021 28.5 6.8 54 165-222 51-109 (274)
49 1t5b_A Acyl carrier protein ph 40.5 1.2E+02 0.0041 24.6 8.3 29 165-193 9-39 (201)
50 2v9d_A YAGE; dihydrodipicolini 40.4 1.8E+02 0.0061 27.1 10.3 52 189-244 100-154 (343)
51 2vc6_A MOSA, dihydrodipicolina 40.4 2E+02 0.0068 25.8 10.4 52 189-244 69-123 (292)
52 3e96_A Dihydrodipicolinate syn 37.8 1E+02 0.0035 28.2 8.1 53 187-244 79-134 (316)
53 3k9c_A Transcriptional regulat 37.4 1.6E+02 0.0056 25.1 9.0 47 174-222 28-74 (289)
54 2g7z_A Conserved hypothetical 36.9 1.9E+02 0.0065 26.0 9.6 94 199-305 66-174 (282)
55 2yxb_A Coenzyme B12-dependent 36.9 61 0.0021 26.8 5.8 105 99-219 18-126 (161)
56 3eb2_A Putative dihydrodipicol 36.8 1.2E+02 0.0041 27.5 8.3 55 187-245 71-128 (300)
57 2nly_A BH1492 protein, diverge 36.0 2.2E+02 0.0074 25.5 9.7 87 189-275 27-125 (245)
58 1pzx_A Hypothetical protein AP 35.9 1.9E+02 0.0065 26.1 9.5 98 199-305 63-175 (289)
59 3szu_A ISPH, 4-hydroxy-3-methy 35.7 20 0.00068 34.0 2.8 18 285-302 77-94 (328)
60 2ftp_A Hydroxymethylglutaryl-C 35.1 63 0.0022 29.3 6.1 48 174-221 124-179 (302)
61 3b4u_A Dihydrodipicolinate syn 34.3 1.9E+02 0.0067 26.0 9.3 63 179-245 62-128 (294)
62 1o97_C Electron transferring f 33.9 1.4E+02 0.0047 26.8 8.1 51 195-246 61-111 (264)
63 1ydo_A HMG-COA lyase; TIM-barr 33.3 56 0.0019 30.0 5.5 47 174-220 122-176 (307)
64 3lup_A DEGV family protein; PS 31.6 87 0.003 28.4 6.4 95 199-305 65-174 (285)
65 3e61_A Putative transcriptiona 31.6 2E+02 0.0068 24.1 8.5 51 170-222 21-72 (277)
66 3m9w_A D-xylose-binding peripl 31.1 1.3E+02 0.0043 26.1 7.2 41 173-216 45-85 (313)
67 2q7s_A N-formylglutamate amido 30.8 28 0.00097 32.0 3.0 32 265-300 147-178 (290)
68 3dlo_A Universal stress protei 30.6 1.6E+02 0.0054 23.1 7.2 52 171-224 75-126 (155)
69 1h2e_A Phosphatase, YHFR; hydr 30.4 1.4E+02 0.0046 25.0 7.1 51 165-222 25-78 (207)
70 3h5l_A Putative branched-chain 30.4 2.8E+02 0.0096 25.0 9.8 53 169-221 174-226 (419)
71 3vow_A Probable DNA DC->DU-edi 30.2 24 0.00082 30.9 2.2 102 157-278 84-189 (190)
72 2fqx_A Membrane lipoprotein TM 29.7 2.9E+02 0.01 24.4 10.4 50 171-222 21-70 (318)
73 4dpp_A DHDPS 2, dihydrodipicol 29.6 1.8E+02 0.0062 27.5 8.4 50 187-240 126-178 (360)
74 3l6u_A ABC-type sugar transpor 29.1 2.2E+02 0.0075 24.0 8.4 54 170-225 21-75 (293)
75 3qk7_A Transcriptional regulat 28.0 2.8E+02 0.0096 23.6 10.9 52 171-224 24-75 (294)
76 3v4k_A DNA DC->DU-editing enzy 28.0 62 0.0021 28.6 4.5 101 157-278 98-202 (203)
77 3dnf_A ISPH, LYTB, 4-hydroxy-3 27.9 31 0.0011 32.2 2.7 50 253-302 33-82 (297)
78 2cw6_A Hydroxymethylglutaryl-C 27.4 94 0.0032 28.0 5.9 47 175-221 122-176 (298)
79 3g1w_A Sugar ABC transporter; 26.9 1.6E+02 0.0054 25.2 7.1 52 171-224 18-71 (305)
80 3f3k_A Uncharacterized protein 26.8 95 0.0033 27.1 5.6 137 165-302 29-184 (265)
81 2odf_A AGR_C_3887P, hypothetic 26.5 37 0.0013 30.6 2.9 30 265-298 129-158 (257)
82 3lop_A Substrate binding perip 26.1 1.9E+02 0.0064 25.5 7.6 51 170-220 152-202 (364)
83 3h5d_A DHDPS, dihydrodipicolin 26.1 3.7E+02 0.013 24.4 9.9 62 179-244 66-131 (311)
84 3qfe_A Putative dihydrodipicol 26.0 3.8E+02 0.013 24.4 9.9 58 183-244 74-136 (318)
85 3lhk_A Putative DNA binding pr 25.0 1.7E+02 0.0059 23.7 6.6 80 171-259 19-102 (154)
86 3snr_A Extracellular ligand-bi 24.9 3.3E+02 0.011 23.4 10.3 52 169-220 145-196 (362)
87 2qv5_A AGR_C_5032P, uncharacte 24.7 2.9E+02 0.0098 24.9 8.5 88 189-276 54-153 (261)
88 3a5f_A Dihydrodipicolinate syn 24.4 2.2E+02 0.0074 25.6 7.7 43 189-235 70-115 (291)
89 3tb6_A Arabinose metabolism tr 24.1 2.2E+02 0.0076 23.9 7.4 13 204-216 89-101 (298)
90 3qi7_A Putative transcriptiona 23.8 4.4E+02 0.015 24.9 10.0 69 204-275 145-213 (371)
91 4a3s_A 6-phosphofructokinase; 23.1 4.3E+02 0.015 24.3 9.6 98 171-273 77-182 (319)
92 4f06_A Extracellular ligand-bi 22.5 1.8E+02 0.0063 25.9 6.9 52 169-220 149-200 (371)
93 2rgy_A Transcriptional regulat 22.3 3.6E+02 0.012 22.8 9.2 12 205-216 81-92 (290)
94 3td9_A Branched chain amino ac 22.1 1.9E+02 0.0064 25.5 6.8 50 170-220 161-210 (366)
95 3l49_A ABC sugar (ribose) tran 22.1 2.8E+02 0.0096 23.3 7.7 14 203-216 75-88 (291)
96 4dik_A Flavoprotein; TM0755, e 22.0 1.3E+02 0.0044 28.6 5.9 48 171-220 278-325 (410)
97 3st8_A Bifunctional protein GL 21.9 2E+02 0.0068 27.5 7.3 69 162-243 37-106 (501)
98 3hut_A Putative branched-chain 21.5 2.1E+02 0.0071 25.0 6.9 53 168-220 148-200 (358)
99 1efv_B Electron transfer flavo 21.4 2.6E+02 0.0089 24.9 7.5 51 195-245 63-114 (255)
100 3h5t_A Transcriptional regulat 21.4 3.2E+02 0.011 24.2 8.2 49 171-223 87-137 (366)
101 1efp_B ETF, protein (electron 21.3 2.4E+02 0.0082 25.0 7.2 78 166-245 33-111 (252)
102 3s99_A Basic membrane lipoprot 21.3 3.7E+02 0.013 24.8 8.8 12 205-216 77-88 (356)
103 3uug_A Multiple sugar-binding 21.1 2.7E+02 0.0091 24.0 7.5 53 171-225 17-70 (330)
104 4eyg_A Twin-arginine transloca 20.7 2.2E+02 0.0075 24.9 6.9 52 169-220 149-200 (368)
105 3ipc_A ABC transporter, substr 20.6 2.6E+02 0.0087 24.4 7.3 51 169-219 148-198 (356)
106 2a5l_A Trp repressor binding p 20.6 1.8E+02 0.0062 23.5 5.9 28 165-193 13-40 (200)
107 3ih5_A Electron transfer flavo 20.2 2.4E+02 0.0083 24.3 6.9 68 203-279 48-115 (217)
No 1
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*
Probab=100.00 E-value=6.3e-58 Score=442.99 Aligned_cols=203 Identities=37% Similarity=0.621 Sum_probs=188.6
Q ss_pred CCceEEEEEccCCCCCcCcHHHHHHhhcCCCCcccCChhhhhhhhHHHHHHHhccchhhHHhhcccCCCCchhHHHHHHH
Q 021762 97 EDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQA 176 (308)
Q Consensus 97 ~~K~aVLLlNlGgPes~~dV~~FL~n~f~D~~VI~lP~~~~~~~~~L~~~Ia~~R~~ks~~~Y~~IGggSPL~~iT~~Qa 176 (308)
++|+||||||||||++++||++||+|||+||+||++|. |++|+++|+++|++|++++|+.|||||||+.+|++|+
T Consensus 2 ~~k~gVLL~nlG~P~~~~~V~~fL~~~~~d~~Vi~~P~-----~~~L~~~I~~~R~~k~~~~Y~~igggSPL~~~t~~Q~ 76 (359)
T 3hcn_A 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPI-----QNKLAPFIAKRRTPKIQEQYRRIGGGSPIKIWTSKQG 76 (359)
T ss_dssp CCCEEEEEEECCCCSSGGGHHHHHHHHHTCTTTCCCTT-----HHHHHHHHHHHHHHHHHHHHHHTTSSCCHHHHHHHHH
T ss_pred CCceEEEEEeCCCCCCHHHHHHHHHHHccCCcccccch-----HHHHhHHhcccchHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 57899999999999999999999999999999999982 6789999999999999999999999999999999999
Q ss_pred HHHHHHHHhcC---CCceeEEeeecCCCCHHHHHHHHHHcCCCEEEEeecCccccccchhhHHHHHHHHHHHhccCCCCC
Q 021762 177 QALKTALEAKN---LPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLP 253 (308)
Q Consensus 177 ~aL~~~L~~~g---~~~~V~~AMrY~~P~I~eal~~L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~e~~~~~~i~ 253 (308)
++|++.|++.+ .++.|++|||||+|+|+|++++|+++|+++||+||||||||.+||||+++.+.+++++....+.++
T Consensus 77 ~~L~~~L~~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ivvlPlyPqyS~~Ttgs~~~~~~~~~~~~~~~~~~~ 156 (359)
T 3hcn_A 77 EGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMK 156 (359)
T ss_dssp HHHHHHHHHHCGGGCSEEEEEEESSSSSBHHHHHHHHHHTTCSEEEEEESCSSCCTTTHHHHHHHHHHHHHHTTCCCSSE
T ss_pred HHHHHHHhhhcccccCceEEEEEeeCCCCHHHHHHHHHhcCCCeEEEEECCccccccchhhHHHHHHHHHHHhccCCCCc
Confidence 99999998754 468999999999999999999999999999999999999999999999999999988876555677
Q ss_pred eEEccCCCCChHHHHHHHHHHHHHHhhcCCC--CceEEEEEeCCCCchhhhhc
Q 021762 254 VSIIRSWYQREGYVNSMADLIQKELGKFQKP--EEVSFIVVAYTFCMVPLQKF 304 (308)
Q Consensus 254 v~~I~~~~~~p~YI~a~a~~I~e~l~~~~~~--~~~~LLFSaHglP~r~v~~~ 304 (308)
+++|++||+||+||+|++++|++++++++.+ ++++|||||||||+++++++
T Consensus 157 ~~~i~~~~~~p~yI~a~a~~I~~~l~~~~~~~~~~~~LlfSaHgiP~~~~~~G 209 (359)
T 3hcn_A 157 WSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRG 209 (359)
T ss_dssp EEEECCCTTCHHHHHHHHHHHHHHHTTSCTTTGGGCEEEEEEECCBHHHHTTT
T ss_pred eEEeCCccCCHHHHHHHHHHHHHHHHhCCccccCCcEEEEEcCCChHhhcccC
Confidence 9999999999999999999999999887643 45789999999999999764
No 2
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A
Probab=100.00 E-value=9e-57 Score=435.33 Aligned_cols=206 Identities=33% Similarity=0.572 Sum_probs=191.0
Q ss_pred CCCceEEEEEccCCCCCcCcHHHHHHhhcCCCCcccCChhhhhhhhHHHHHHHhccchhhHHhhcccCCCCchhHHHHHH
Q 021762 96 AEDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQ 175 (308)
Q Consensus 96 ~~~K~aVLLlNlGgPes~~dV~~FL~n~f~D~~VI~lP~~~~~~~~~L~~~Ia~~R~~ks~~~Y~~IGggSPL~~iT~~Q 175 (308)
+++|+||||||||||++++||++||+|||+||+||++|++ ||++|+.+|+++|++|++++|+.|||||||+.+|++|
T Consensus 4 ~~~k~gvLL~nlG~P~~~~~V~~fL~~~~~d~~vi~~p~~---~~~~l~~~I~~~R~~k~~~~Y~~ig~gSPL~~~t~~q 80 (362)
T 1lbq_A 4 KRSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAK---YQKTIAKYIAKFRTPKIEKQYREIGGGSPIRKWSEYQ 80 (362)
T ss_dssp -CCCEEEEEEECCCCSSGGGHHHHHHHHTTCCSSSCCCSS---SHHHHHHHHHHHHHHHHHHHHHHTTSSCSHHHHHHHH
T ss_pred CCCceEEEEEECCCCCCHHHHHHHHHHhccCCccccCCHH---HHHHHhhhcCccchHHHHHHHHHcCCCCccHHHHHHH
Confidence 5678999999999999999999999999999999999985 4678999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcC---CCceeEEeeecCCCCHHHHHHHHHHcCCCEEEEeecCccccccchhhHHHHHHHHHHHhccCCCC
Q 021762 176 AQALKTALEAKN---LPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRL 252 (308)
Q Consensus 176 a~aL~~~L~~~g---~~~~V~~AMrY~~P~I~eal~~L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~e~~~~~~i 252 (308)
+++|+++|++.+ .++.|++|||||+|+|+|++++|+++|+++|++||||||||.+|||++.+.+.+++++.+..+.+
T Consensus 81 ~~~L~~~L~~~~~~~~~~~V~~amry~~P~i~d~l~~l~~~G~~~ivvlPlyPqyS~~ttgs~~~~i~~~l~~~~~~~~i 160 (362)
T 1lbq_A 81 ATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSI 160 (362)
T ss_dssp HHHHHHHHHHHCGGGCCEEEEEEESSSSSCHHHHHHHHHTTTCCEEEEEESCSSCCTTTHHHHHHHHHHHHHHHCTTCCS
T ss_pred HHHHHHHHHhhcccCCCceEEeecccCCCCHHHHHHHHHHcCCCeEEEEecchhccccchhHHHHHHHHHHHhcccCCCc
Confidence 999999998654 57899999999999999999999999999999999999999999999999999999887655667
Q ss_pred CeEEccCCCCChHHHHHHHHHHHHHHhhcCCC--CceEEEEEeCCCCchhhhhc
Q 021762 253 PVSIIRSWYQREGYVNSMADLIQKELGKFQKP--EEVSFIVVAYTFCMVPLQKF 304 (308)
Q Consensus 253 ~v~~I~~~~~~p~YI~a~a~~I~e~l~~~~~~--~~~~LLFSaHglP~r~v~~~ 304 (308)
++++|++||+||+||+|++++|+++++.++.+ ++++|||||||||+++++++
T Consensus 161 ~i~~i~~~~~~p~~I~ala~~I~~~l~~~~~~~~~~~~llfSaHglP~~~~~~G 214 (362)
T 1lbq_A 161 SWSVIDRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTG 214 (362)
T ss_dssp EEEEECCCTTCHHHHHHHHHHHHHHHHTSCSTTGGGCEEEEEEECCBHHHHTTT
T ss_pred eEEEecCCCCCHHHHHHHHHHHHHHHHhcCcccCCCeEEEEecCCCccccccCC
Confidence 78899999999999999999999999887543 45799999999999998764
No 3
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=100.00 E-value=6.9e-49 Score=372.22 Aligned_cols=188 Identities=25% Similarity=0.376 Sum_probs=170.4
Q ss_pred CCCceEEEEEccCCCCCcCcHHHHHHhhcCCCCcccCChhhhhhhhHHHHHHHhccchhhHHhhcccCCCCchhHHHHHH
Q 021762 96 AEDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQ 175 (308)
Q Consensus 96 ~~~K~aVLLlNlGgPes~~dV~~FL~n~f~D~~VI~lP~~~~~~~~~L~~~Ia~~R~~ks~~~Y~~IGggSPL~~iT~~Q 175 (308)
+++|+||||||||||++++||++||+|+|+|+.| | +.|++|++++|+.|||||||+.+|++|
T Consensus 2 ~~~~~~vLl~n~G~P~~~~~v~~fL~~~~~~~~~---~---------------~~r~~~~~~~Y~~ig~gSPl~~~t~~q 63 (310)
T 2h1v_A 2 SRKKMGLLVMAYGTPYKEEDIERYYTHIRRGRKP---E---------------PEMLQDLKDRYEAIGGISPLAQITEQQ 63 (310)
T ss_dssp CCEEEEEEEEECCCCSSGGGHHHHHHHHTTTCCC---C---------------HHHHHHHHHHHHHTTCSHHHHHHHHHH
T ss_pred CCCCeEEEEEeCCCCCChHHHHHHHHHHhcCCCC---C---------------hHHHHHHHHHHHHCCCCChhHHHHHHH
Confidence 3568999999999999999999999999998742 4 235788999999999999999999999
Q ss_pred HHHHHHHHHhcCC--CceeEEeeecCCCCHHHHHHHHHHcCCCEEEEeecCccccccchhhHHHHHHHHHHHhccCCCCC
Q 021762 176 AQALKTALEAKNL--PVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLP 253 (308)
Q Consensus 176 a~aL~~~L~~~g~--~~~V~~AMrY~~P~I~eal~~L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~e~~~~~~i~ 253 (308)
+++|++.|++++. ++.|++|||||+|+|+|+|++|+++|+++|+++|||||||.+|||++.+.+.+++++.+ .++
T Consensus 64 ~~~L~~~L~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ivvlPl~pq~s~st~g~~~~~i~~~l~~~~---~~~ 140 (310)
T 2h1v_A 64 AHNLEQHLNEIQDEITFKAYIGLAHIEPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSVQSYNKRAKEEAEKLG---GLT 140 (310)
T ss_dssp HHHHHHHHHHHCSSEEEEEEEEESSSSSBHHHHHHHHHHTTCCEEEEEESSSSCCTTTHHHHHHHHHHHHHHHC---SCE
T ss_pred HHHHHHHHHhcCCCCCceEeehhcCCCCCHHHHHHHHHhcCCCEEEEEECccchhhhhHHHHHHHHHHHHHhCC---CCe
Confidence 9999999987664 79999999999999999999999999999999999999999999999999999987754 467
Q ss_pred eEEccCCCCChHHHHHHHHHHHHHHhhcCC--CCceEEEEEeCCCCchhhhhc
Q 021762 254 VSIIRSWYQREGYVNSMADLIQKELGKFQK--PEEVSFIVVAYTFCMVPLQKF 304 (308)
Q Consensus 254 v~~I~~~~~~p~YI~a~a~~I~e~l~~~~~--~~~~~LLFSaHglP~r~v~~~ 304 (308)
+++|++||+||+||++++++|+++++.++. +++.+|||||||+|.+.++++
T Consensus 141 i~~i~~~~~~p~~i~a~a~~i~~~l~~~~~~~~~~~~llfs~HG~P~~~~~~g 193 (310)
T 2h1v_A 141 ITSVESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLPEKIKEFG 193 (310)
T ss_dssp EEECCCCTTCHHHHHHHHHHHHHHHHHSCHHHHTSEEEEEEEECCBGGGGGGT
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHhcccccCCCceEEEecCCCchhhccCC
Confidence 999999999999999999999999987653 246799999999999988653
No 4
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=99.64 E-value=1.4e-15 Score=139.51 Aligned_cols=117 Identities=13% Similarity=0.068 Sum_probs=91.7
Q ss_pred HHHHHHHHHHhcCCCceeEEeeec------------CCCCHHHHHHHHHHcCCCEEEEeecCccccccchhhHHHHHHHH
Q 021762 175 QAQALKTALEAKNLPVNVYVGMRY------------WYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNI 242 (308)
Q Consensus 175 Qa~aL~~~L~~~g~~~~V~~AMrY------------~~P~I~eal~~L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea 242 (308)
..+++++.|.+...+++|+.||.+ +.|++++++++|+++|+++|+|+||||+ +|+..+.+.+.
T Consensus 27 ~~~~~~~~l~~~~~~~~V~~af~~~~i~~~l~~~~~~~P~i~~al~~l~~~G~~~ivV~Pl~l~-----~G~~~~di~~~ 101 (269)
T 2xvy_A 27 ALDKMGDRVRAAHPDIPVRWAYTAKMIRAKLRAEGIAAPSPAEALAGMAEEGFTHVAVQSLHTI-----PGEEFHGLLET 101 (269)
T ss_dssp HHHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCCEEEEEECCSS-----SSHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCeEEeehhhHHHHHHHHHcCCCCCCHHHHHHHHHHCCCCEEEEEeceee-----ccHhHHHHHHH
Confidence 344444444444457899999997 8899999999999999999999999995 56666777776
Q ss_pred ---HHHhccCCCCCeEEccCCCCChHHHHHHHHHHHHHHhhcCCCCceEEEEEeCCCCc
Q 021762 243 ---FREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVSFIVVAYTFCM 298 (308)
Q Consensus 243 ---~~e~~~~~~i~v~~I~~~~~~p~YI~a~a~~I~e~l~~~~~~~~~~LLFSaHglP~ 298 (308)
+++... ..++++++++|+++|.|+++++++|++.+.... +++..|||++||+|.
T Consensus 102 ~~~l~~~~~-~~~~i~~~~pl~~~p~~i~~la~~i~~~~~~~~-~~~~~lll~~HGs~~ 158 (269)
T 2xvy_A 102 AHAFQGLPK-GLTRVSVGLPLIGTTADAEAVAEALVASLPADR-KPGEPVVFMGHGTPH 158 (269)
T ss_dssp HHHHTTCTT-SCSEEEEECCSSCSHHHHHHHHHHHHHHSCTTC-CTTCCEEEEECCCSS
T ss_pred HHHHHHhhc-cCCeEEEeCCCCCCHHHHHHHHHHHHHhchhhc-cCCceEEEEECCCCh
Confidence 443221 125699999999999999999999999986421 234579999999996
No 5
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=99.33 E-value=1.7e-11 Score=112.82 Aligned_cols=129 Identities=8% Similarity=0.049 Sum_probs=100.4
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcCCCceeEEee-----------ecC--CCCHHHHHHHHHHcCCCEEEEeecCccccc
Q 021762 163 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVGM-----------RYW--YPFTEEAVQQIKRDRITRLVVLPLYPQFSI 229 (308)
Q Consensus 163 GggSPL~~iT~~Qa~aL~~~L~~~g~~~~V~~AM-----------rY~--~P~I~eal~~L~~~GidrIVvLPLyPqyS~ 229 (308)
+-||-..+..++..+++.+.+.+...+++|+.|| +|+ .|++++++++|.++|+++|+|+|||+
T Consensus 9 ~hGSr~~~~~~~~~~~~~~~v~~~~p~~~V~~af~s~~i~~~l~~~~g~~~psi~~aL~~l~~~G~~~vvV~Pl~l---- 84 (264)
T 2xwp_A 9 SFGTSYHDTCEKNIVACERDLAASCPDRDLFRAFTSGMIIRKLRQRDGIDIDTPLQALQKLAAQGYQDVAIQSLHI---- 84 (264)
T ss_dssp ECCCSCHHHHHHHHHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHCCCCCCHHHHHHHHHHHTCCEEEEEECCS----
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHHCCCCeEEeehhhHHHHHHHHHhcCCCCCCHHHHHHHHHhCCCCEEEEEeCcc----
Confidence 5667666655536666666666555689999999 444 59999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHhccCCCCCeEEccCCCCChHHHHHHHHHHHHHHhhcCCCCceEEEEEeCCCCch
Q 021762 230 STTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVSFIVVAYTFCMV 299 (308)
Q Consensus 230 sTtgS~~~~l~ea~~e~~~~~~i~v~~I~~~~~~p~YI~a~a~~I~e~l~~~~~~~~~~LLFSaHglP~r 299 (308)
+.|...+++.+.+++.... -..+++.+++..+|.|++++++.|.+.+... +++..|||++||.|..
T Consensus 85 -~~G~~~~di~~~v~~~~~~-~~~i~~~~pl~~~~~~~~~l~~~l~~~~~~~--~~~~~lvl~gHGs~~~ 150 (264)
T 2xwp_A 85 -INGDEYEKIVREVQLLRPL-FTRLTLGVPLLSSHNDYVQLMQALRQQMPSL--RQTEKVVFMGHGASHH 150 (264)
T ss_dssp -SSSHHHHHHHHHHHHHGGG-CSEEEEECCSSCSHHHHHHHHHHHHTTSCCC--CTTEEEEEEECCCSSG
T ss_pred -cCcHHHHHHHHHHHHHHhh-CCceEEecCCCCCHHHHHHHHHHHHHhcccc--CCCCeEEEEECCCCch
Confidence 4677777777776655422 1258899999999999999999998876543 2456899999999974
No 6
>2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans}
Probab=99.14 E-value=2.1e-11 Score=121.62 Aligned_cols=125 Identities=20% Similarity=0.252 Sum_probs=98.8
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHhcCC-----CceeEEeeecCCCCHHHHHHHHHHcCCCEEEEeecCccccccchhhHH
Q 021762 162 IGGGSPLRKITDEQAQALKTALEAKNL-----PVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSI 236 (308)
Q Consensus 162 IGggSPL~~iT~~Qa~aL~~~L~~~g~-----~~~V~~AMrY~~P~I~eal~~L~~~GidrIVvLPLyPqyS~sTtgS~~ 236 (308)
+|.|||+...++++.++|++.|.+.+. ++.|++||..+.|+|++++++| |+++|+|+|||++++..+..
T Consensus 9 VgHGSp~~~~a~~~i~~La~~l~~~~~~~~L~~~~V~~Afle~~PsI~eaL~~L---G~~rVvVvPLfl~~G~H~~~--- 82 (474)
T 2jh3_A 9 IGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPGLRQVLRTV---AYSDVTVVPVFLSEGYVTET--- 82 (474)
T ss_dssp EECCCSSCTHHHHHHHHHHHHHHHHHHTTCCSCSEEEEEESSSSSBTTTGGGGC---CBSEEEEEECCSCCSHHHHT---
T ss_pred EeCCCCCChhHHHHHHHHHHHHHHhCCccccCCCeEEEEEcCCCCCHHHHHHHc---CcCeEEEEEEehhccHhHHH---
Confidence 478999999999999999999987655 7899999888999999999999 99999999999997765543
Q ss_pred HHHHHHHHHhc-----------cCCCCCeEEccCCCCChHHHHHHHHHHHHHHhhcCCCCceEEEEEe
Q 021762 237 RVLQNIFREDA-----------YLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVSFIVVA 293 (308)
Q Consensus 237 ~~l~ea~~e~~-----------~~~~i~v~~I~~~~~~p~YI~a~a~~I~e~l~~~~~~~~~~LLFSa 293 (308)
.+.+.+.+.. ..+.+.++++++|+.+|.|+++++++|+++++.-..+++..|||.+
T Consensus 83 -DIp~~l~~~~~~~dsw~~~~~~~p~~~I~~~~pLG~~P~lie~la~rI~eal~~g~~~~~~avvlvg 149 (474)
T 2jh3_A 83 -VLPRELGLGHQGPVPTGGVVRVLGGRRVRYTRPLGAHPGMADAIAAQARDTLPEGTDPADVTLLLLA 149 (474)
T ss_dssp -HHHHHHTCCCCSCCCTTCEEEEETTEEEEECCCGGGSTTHHHHHHHHHHHHSCTTCCGGGCEEEEEE
T ss_pred -HHHHHHHHhhhccccchhhhhhcCCceEEEeCccCCCHHHHHHHHHHHHHHHhhccCcccceEEEec
Confidence 3333333221 1234578999999999999999999999998651123455677666
No 7
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=99.02 E-value=2.5e-09 Score=87.60 Aligned_cols=112 Identities=14% Similarity=0.179 Sum_probs=83.7
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHhcCCCceeEEe-eecCCCCHHHHHHHHHHcCCCEEEEeecCccccccchhhHHHHHH
Q 021762 162 IGGGSPLRKITDEQAQALKTALEAKNLPVNVYVG-MRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQ 240 (308)
Q Consensus 162 IGggSPL~~iT~~Qa~aL~~~L~~~g~~~~V~~A-MrY~~P~I~eal~~L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ 240 (308)
+|.||+-... .+..+++.+.|.+.. ..|+.| |.++.|++++++++|.++|+++|+++|||.....-+....-+.++
T Consensus 11 v~HGS~~~~~-~~~~~~l~~~l~~~~--~~V~~a~le~~~P~l~~~l~~l~~~G~~~vvvvPlfl~~G~H~~~Dip~~~~ 87 (126)
T 3lyh_A 11 LAHGSSDARW-CETFEKLAEPTVESI--ENAAIAYMELAEPSLDTIVNRAKGQGVEQFTVVPLFLAAGRHLRKDVPAMIE 87 (126)
T ss_dssp EECCCSCHHH-HHHHHHHHHHHHHHS--TTCEEEESSSSSSBHHHHHHHHHHTTCCEEEEEECCSCCCHHHHHHHHHHHH
T ss_pred EeCCCCCHHH-HHHHHHHHHHHHhhc--CCEEEEEEeCCCCCHHHHHHHHHHcCCCEEEEEecccCCCchhhhHHHHHHH
Confidence 4677875443 446677777776655 478888 788999999999999999999999999999865443332223332
Q ss_pred HHHHHhccCCCCCeEEccCCCCChHHHHHHHHHHHHHHhh
Q 021762 241 NIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGK 280 (308)
Q Consensus 241 ea~~e~~~~~~i~v~~I~~~~~~p~YI~a~a~~I~e~l~~ 280 (308)
+.-+. + ++.+.+.+++..+|.++++++++|++++..
T Consensus 88 ~~~~~--~--~~~i~~~~~LG~~p~l~~~l~~ri~~al~~ 123 (126)
T 3lyh_A 88 RLEAE--H--GVTIRLAEPIGKNPRLGLAIRDVVKEELER 123 (126)
T ss_dssp HHHHH--H--TCEEEECCCGGGSHHHHHHHHHHHHHHHHH
T ss_pred HHHHH--h--CceEEEcCCCCCChHHHHHHHHHHHHHHhc
Confidence 22111 1 356888999999999999999999999864
No 8
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=98.97 E-value=8.3e-10 Score=94.37 Aligned_cols=112 Identities=15% Similarity=0.180 Sum_probs=80.3
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHhcCCCceeEEe-eec-CCCCHHHHHHHHHHcCCCEEEEeecCccccccchhhHHHHH
Q 021762 162 IGGGSPLRKITDEQAQALKTALEAKNLPVNVYVG-MRY-WYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVL 239 (308)
Q Consensus 162 IGggSPL~~iT~~Qa~aL~~~L~~~g~~~~V~~A-MrY-~~P~I~eal~~L~~~GidrIVvLPLyPqyS~sTtgS~~~~l 239 (308)
+|-||+-.. ..+..+++.+.|.+......|++| |.| +.|.+++++++| |+++|+|+|||+++...+... +
T Consensus 30 v~HGS~~p~-~~~~~~~la~~l~~~~~~~~V~~afle~~~~Psl~~~l~~l---G~~~VvVvPlfL~~G~h~~~D----I 101 (156)
T 1tjn_A 30 VGHGSQLNH-YREVMELHRKRIEESGAFDEVKIAFAARKRRPMPDEAIREM---NCDIIYVVPLFISYGLHVTED----L 101 (156)
T ss_dssp EECCTTSTT-HHHHHHHHHHHHHHHTSSSEEEEEECSSSCSSCHHHHHHHC---CCSEEEEEECCSSCSHHHHTH----H
T ss_pred EECCCCCHH-HHHHHHHHHHHHHhhCCCCeEEEEEecCCCCCCHHHHHHHc---CCCEEEEEechhcCCchhHhH----H
Confidence 366776433 333445555555554446789999 888 999999999999 999999999999977655543 3
Q ss_pred HHHHHHhc-------cCCCCCeEEccCCCCChHHHHHHHHHHHHHHhhc
Q 021762 240 QNIFREDA-------YLSRLPVSIIRSWYQREGYVNSMADLIQKELGKF 281 (308)
Q Consensus 240 ~ea~~e~~-------~~~~i~v~~I~~~~~~p~YI~a~a~~I~e~l~~~ 281 (308)
.+.+.+.. ..+.+.+.+.+++..+|.++++++++|+++++..
T Consensus 102 p~~l~~~~~~~sw~~~~~~~~i~~~~pLG~~p~l~~~l~~ri~ea~~~~ 150 (156)
T 1tjn_A 102 PDLLGFPRGRGIKEGEFEGKKVVICEPIGEDYFVTYAILNSVFRIGRDG 150 (156)
T ss_dssp HHHHTCCCSSSCEEEEETTEEEEECCCSTTCHHHHHHHHHHHHCCC---
T ss_pred HHHHHHHHhcccccccCCCceEEEeCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 33332211 2345678899999999999999999999887643
No 9
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=98.93 E-value=1.7e-09 Score=88.76 Aligned_cols=111 Identities=15% Similarity=0.187 Sum_probs=81.6
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHhcCCCceeEEe-eec-CCCCHHHHHHHHHHcCCCEEEEeecCccccccchhhHHHHH
Q 021762 162 IGGGSPLRKITDEQAQALKTALEAKNLPVNVYVG-MRY-WYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVL 239 (308)
Q Consensus 162 IGggSPL~~iT~~Qa~aL~~~L~~~g~~~~V~~A-MrY-~~P~I~eal~~L~~~GidrIVvLPLyPqyS~sTtgS~~~~l 239 (308)
+|.||+-.. ..+..+++.+.|.+......|++| |.| ..|++++++++| |+++|+|+|||+++..-+.. ++
T Consensus 9 v~HGS~~~~-~~~~~~~la~~l~~~~~~~~V~~a~le~~~~Psl~~~l~~l---g~~~v~v~Plfl~~G~h~~~----di 80 (133)
T 2xws_A 9 VGHGSQLNH-YREVMELHRKRIEESGAFDEVKIAFAARKRRPMPDEAIREM---NCDIIYVVPLFISYGLHVTE----DL 80 (133)
T ss_dssp EECSCCCHH-HHHHHHHHHHHHHHHTSSSEEEEEESSTTCSSCHHHHHHHC---CCSEEEEEECCSSCCHHHHT----HH
T ss_pred EECCCCCHH-HHHHHHHHHHHHHhhCCCCcEEeeeeecCCCCCHHHHHHHc---CCCEEEEEeeeeCCCcchHh----HH
Confidence 366777544 344566666677665556789999 788 999999999999 99999999999996655543 33
Q ss_pred HHHHHHhc-------cCCCCCeEEccCCCCChHHHHHHHHHHHHHHhh
Q 021762 240 QNIFREDA-------YLSRLPVSIIRSWYQREGYVNSMADLIQKELGK 280 (308)
Q Consensus 240 ~ea~~e~~-------~~~~i~v~~I~~~~~~p~YI~a~a~~I~e~l~~ 280 (308)
.+.+.+.. ..+.+.+.+.+++..+|.++++++++|+++++.
T Consensus 81 ~~~~~~~~~~~s~~~~~~~~~i~~~~pLg~~p~~~~~l~~ri~~a~~~ 128 (133)
T 2xws_A 81 PDLLGFPRGRGIKEGEFEGKKVVICEPIGEDYFVTYAILNSVFRIGRD 128 (133)
T ss_dssp HHHHTCCCSSSCEEEEETTEEEEECCCSTTSHHHHHHHHHHHHCCC--
T ss_pred HHHHHHhhccccccccCCCceEEEcCCCCCCHHHHHHHHHHHHHhhcC
Confidence 33333211 133456889999999999999999999887753
No 10
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=98.31 E-value=4.3e-06 Score=76.61 Aligned_cols=104 Identities=14% Similarity=0.247 Sum_probs=79.8
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcCCCceeEEeeecCCCCHHHHHHHHHHcCCCEEEEeecCccccccchhhHHHH----
Q 021762 163 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRV---- 238 (308)
Q Consensus 163 GggSPL~~iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~eal~~L~~~GidrIVvLPLyPqyS~sTtgS~~~~---- 238 (308)
|.|||.. .....++++..|.+.+. .|++|+--|.|+++++++++.+.|+++|+|+|+|-. +|-+.+.
T Consensus 144 gHGs~~~--~~~~~~~~a~~l~~~~~--~v~~g~~e~~P~~~~~l~~l~~~G~~~v~v~P~~l~-----aG~h~~~Di~~ 214 (264)
T 2xwp_A 144 GHGASHH--AFAAYACLDHMMTAQRF--PARVGAVESYPEVDILIDSLRDEGVTGVHLMPLMLV-----AGDHAINDMAS 214 (264)
T ss_dssp ECCCSSG--GGHHHHHHHHHHHHTTC--SEEEEESSSSSCHHHHHHHHHHHTCCEEEEEECSSC-----CCHHHHHHHHS
T ss_pred ECCCCch--hhHHHHHHHHHHHhhCC--CEEEEEeCCCCCHHHHHHHHHHCCCCEEEEEeeecc-----cCcchhhhccc
Confidence 7888875 33455677777877653 899998778999999999999999999999999887 5544321
Q ss_pred -----HHHHHHHhccCCCCCeE-EccCCCCChHHHHHHHHHHHHHHh
Q 021762 239 -----LQNIFREDAYLSRLPVS-IIRSWYQREGYVNSMADLIQKELG 279 (308)
Q Consensus 239 -----l~ea~~e~~~~~~i~v~-~I~~~~~~p~YI~a~a~~I~e~l~ 279 (308)
+.+.+.+.+ ..+. .+++...+|.++++++++++++++
T Consensus 215 ~~~d~~~~~~~~~g----~~~~~~~~~LG~~p~i~~~~~~r~~ea~~ 257 (264)
T 2xwp_A 215 DDGDSWKMRFNAAG----IPATPWLSGLGENPAIRAMFVAHLHQALN 257 (264)
T ss_dssp SSTTSHHHHHHHTT----CCEEECCCCGGGCHHHHHHHHHHHHHHHC
T ss_pred cchhHHHHHHHHcC----CeEEEeccCCCCCHHHHHHHHHHHHHHHh
Confidence 334444422 2332 468999999999999999999885
No 11
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=98.05 E-value=1.8e-05 Score=72.11 Aligned_cols=105 Identities=14% Similarity=0.221 Sum_probs=75.9
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcCCCceeEEeeecCCCCHHHHHHHHHHcCCCEEEEeecCccccccchhhHHH-----
Q 021762 163 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIR----- 237 (308)
Q Consensus 163 GggSPL~~iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~eal~~L~~~GidrIVvLPLyPqyS~sTtgS~~~----- 237 (308)
|.|||. ......+++.+.|.+.+ -.+++|.--|.|++++++++|.+.|+++|+|+|+|-. .|-+.+
T Consensus 153 ~HGs~~--~~~~~~~~~a~~l~~~~--~~~~~g~~e~~P~~~~~l~~l~~~G~~~v~v~P~~l~-----~G~h~~~di~~ 223 (269)
T 2xvy_A 153 GHGTPH--PADICYPGLQYYLWRLD--PDLLVGTVEGSPSFDNVMAELDVRKAKRVWLMPLMAV-----AGDHARNDMAG 223 (269)
T ss_dssp ECCCSS--GGGGHHHHHHHHHHTTC--TTEEEEESSSSSCHHHHHHHHHHHTCSEEEEEEESSS-----CCHHHHTTTTC
T ss_pred ECCCCh--hhccHHHHHHHHHHhcC--CCEEEEEcCCCCCHHHHHHHHHHCCCCEEEEECCccc-----cccchhhhcCC
Confidence 778886 22223445677776554 4577886558999999999999999999999998765 222222
Q ss_pred ----HHHHHHHHhccCCCCCeE-EccCCCCChHHHHHHHHHHHHHHhh
Q 021762 238 ----VLQNIFREDAYLSRLPVS-IIRSWYQREGYVNSMADLIQKELGK 280 (308)
Q Consensus 238 ----~l~ea~~e~~~~~~i~v~-~I~~~~~~p~YI~a~a~~I~e~l~~ 280 (308)
.+.+.+.+. +..+. .+++..++|.++++++++++++++.
T Consensus 224 ~~~~~~~~~~~~~----g~~~~~~~~~Lg~~p~~~~~l~~~~~~a~~~ 267 (269)
T 2xvy_A 224 DEDDSWTSQLARR----GIEAKPVLHGTAESDAVAAIWLRHLDDALAR 267 (269)
T ss_dssp SSTTSHHHHHHHT----TCEEEECCCCGGGCHHHHHHHHHHHHHHHHT
T ss_pred CchhHHHHHHHHc----CcEEEEecCCCCCCHHHHHHHHHHHHHHHHh
Confidence 133444442 23444 7899999999999999999998864
No 12
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=97.82 E-value=0.00011 Score=69.24 Aligned_cols=103 Identities=13% Similarity=0.142 Sum_probs=70.0
Q ss_pred chhHHHHHHHHHHHHHHHhcCCCceeEEeeec--------CCCCHHHHHHHHHHc-CCCEEEEeecCccccccchhhHH-
Q 021762 167 PLRKITDEQAQALKTALEAKNLPVNVYVGMRY--------WYPFTEEAVQQIKRD-RITRLVVLPLYPQFSISTTGSSI- 236 (308)
Q Consensus 167 PL~~iT~~Qa~aL~~~L~~~g~~~~V~~AMrY--------~~P~I~eal~~L~~~-GidrIVvLPLyPqyS~sTtgS~~- 236 (308)
|-+..-++-++.|.+.|+. -.+.+++.- ..|++++++++|.+. |+++|+|+|.. |.+-...+..
T Consensus 195 pY~~~~~~t~~~l~e~l~~----~~~~~~fqSrg~g~~~Wl~P~~~~~l~~l~~~~G~k~v~V~P~~--F~sD~lEtl~e 268 (310)
T 2h1v_A 195 PYPDQLHESAKLIAEGAGV----SEYAVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQAFVYVPVG--FVADHLEVLYD 268 (310)
T ss_dssp CHHHHHHHHHHHHHHHHTC----SCEEEEEESCCCCSSCBSSCBHHHHHHHHHHHHCCSEEEEECTT--CCSSCHHHHTT
T ss_pred ChHHHHHHHHHHHHHHcCC----CCEEEEEEcCCCCCCCcCCCCHHHHHHHHHHHcCCceEEEECCc--ccccceeeHHH
Confidence 4455555556666666642 245555533 589999999999999 99999999953 3222221111
Q ss_pred --HHHHHHHHHhccCCCCCeEEccCCCCChHHHHHHHHHHHHHHh
Q 021762 237 --RVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELG 279 (308)
Q Consensus 237 --~~l~ea~~e~~~~~~i~v~~I~~~~~~p~YI~a~a~~I~e~l~ 279 (308)
..+.+.+.+. ++.+..++...++|.||+++++.|.+.++
T Consensus 269 i~~e~~e~~~~~----G~~~~~~p~ln~~p~~i~~l~~~v~~~l~ 309 (310)
T 2h1v_A 269 NDYECKVVTDDI----GASYYRPEMPNAKPEFIDALATVVLKKLG 309 (310)
T ss_dssp TTTHHHHHHHHH----TCEEECCCCCTTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHc----CCeEEECCCCCCCHHHHHHHHHHHHHHhc
Confidence 1233334442 25689999999999999999999998764
No 13
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*
Probab=97.60 E-value=0.00051 Score=66.23 Aligned_cols=108 Identities=15% Similarity=0.209 Sum_probs=76.2
Q ss_pred CCCchhHHHHHHHHHHHHHHHhcCCCceeEEee--ecC-----CCCHHHHHHHHHHcCCCEEEEeecCccccccchhhHH
Q 021762 164 GGSPLRKITDEQAQALKTALEAKNLPVNVYVGM--RYW-----YPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSI 236 (308)
Q Consensus 164 ggSPL~~iT~~Qa~aL~~~L~~~g~~~~V~~AM--rY~-----~P~I~eal~~L~~~GidrIVvLPLyPqyS~sTtgS~~ 236 (308)
.|.|-....++-+++|.++|+. +.++.+++ |.| .|++++++++|.+.|+++|+|+|. -|.+--..+..
T Consensus 208 ~GDpY~~q~~~t~~lv~e~Lg~---~~~~~l~~QSr~G~~~WL~P~t~d~l~~L~~~G~k~vvv~P~--gFvsD~lETL~ 282 (359)
T 3hcn_A 208 RGDPYPQEVSATVQKVMERLEY---CNPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPI--AFTSDHIETLY 282 (359)
T ss_dssp TTCSHHHHHHHHHHHHHHHTTT---CSCEEEEEECCSCSSCBSSSBHHHHHHHHHHTTCCEEEEECT--TCCSCCCCCHH
T ss_pred cCCCHHHHHHHHHHHHHHHcCC---CCCEEEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCeEEEECC--ccchhhHHhHH
Confidence 4677766677777777777753 22244444 234 799999999999999999999995 34443333332
Q ss_pred HH---H-HHHHHHhccCCCC-CeEEccCCCCChHHHHHHHHHHHHHHhh
Q 021762 237 RV---L-QNIFREDAYLSRL-PVSIIRSWYQREGYVNSMADLIQKELGK 280 (308)
Q Consensus 237 ~~---l-~ea~~e~~~~~~i-~v~~I~~~~~~p~YI~a~a~~I~e~l~~ 280 (308)
+. . ++.+.+. ++ .+..|+..-++|.||+++++.|.+.++.
T Consensus 283 Eid~E~~~e~a~e~----G~~~~~rip~LNd~p~fi~~La~lv~~~l~~ 327 (359)
T 3hcn_A 283 ELDIEYSQVLAKEC----GVENIRRAESLNGNPLFSKALADLVHSHIQS 327 (359)
T ss_dssp HHCHHHHHHHHHHT----CCCEEEECCCSTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC----CCceEEEcCCCCCCHHHHHHHHHHHHHHHhc
Confidence 21 1 1223332 34 4899999999999999999999999875
No 14
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A
Probab=97.39 E-value=0.0002 Score=69.11 Aligned_cols=108 Identities=17% Similarity=0.228 Sum_probs=72.5
Q ss_pred CCCchhHHHHHHHHHHHHHHHhcCCCceeEEeeecC-----CCCHHHHHHHHHHcCCCEEEEeecCccccccchhhHHHH
Q 021762 164 GGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYW-----YPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRV 238 (308)
Q Consensus 164 ggSPL~~iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~-----~P~I~eal~~L~~~GidrIVvLPLyPqyS~sTtgS~~~~ 238 (308)
.|.|-....++-++.|.++|+.. .+|.+.+-=|.+ .|++++++++| +.|+++|+|+|. -|++- +++.
T Consensus 213 ~GDpY~~q~~~ta~ll~e~lg~~-~~~~~~fQSr~G~~~WL~P~t~~~l~~L-~~G~k~vvVvP~--gFvsD----~lET 284 (362)
T 1lbq_A 213 TGDAYPAEVAATVYNIMQKLKFK-NPYRLVWQSQVGPKPWLGAQTAEIAEFL-GPKVDGLMFIPI--AFTSD----HIET 284 (362)
T ss_dssp TTCSHHHHHHHHHHHHHHHTTTC-SCEEEEEECCCSSSCBCSCBHHHHHHHH-GGGCSCEEEECT--TCSSC----CHHH
T ss_pred CCCcHHHHHHHHHHHHHHHcCCC-CCEEEEEECCCCCcccCCCCHHHHHHHH-HcCCCeEEEECC--eechh----hHhh
Confidence 45676666666666777766421 134333333566 79999999999 999999999994 34332 3333
Q ss_pred HHHH---HHHhccCCCCCeEEccCCCCChHHHHHHHHHHHHHHhh
Q 021762 239 LQNI---FREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGK 280 (308)
Q Consensus 239 l~ea---~~e~~~~~~i~v~~I~~~~~~p~YI~a~a~~I~e~l~~ 280 (308)
+++. .++.....+. +..++..-++|.||+++++.|.+.++.
T Consensus 285 L~eid~e~~e~~~~~G~-~~~~p~Ln~~p~fi~~L~~lv~~~l~~ 328 (362)
T 1lbq_A 285 LHEIDLGVIGESEYKDK-FKRCESLNGNQTFIEGMADLVKSHLQS 328 (362)
T ss_dssp HTCCCCCCCTTCTTGGG-EEECCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCC-EEEcCCCCCCHHHHHHHHHHHHHHhcc
Confidence 3321 1111111123 899999999999999999999999864
No 15
>2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans}
Probab=96.00 E-value=0.0075 Score=60.10 Aligned_cols=100 Identities=12% Similarity=0.093 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHhcCCCceeEEeeecCCC-----------CHHHHHHHHHHcCCCEEEEeecCccccccchhhHHHHHHHH
Q 021762 174 EQAQALKTALEAKNLPVNVYVGMRYWYP-----------FTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNI 242 (308)
Q Consensus 174 ~Qa~aL~~~L~~~g~~~~V~~AMrY~~P-----------~I~eal~~L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea 242 (308)
.+.+++.+.|.+...--.|++|+.-..| ++++++++| |+++|+|+|+|-.-..-+ .+++...
T Consensus 155 ~~~~~la~~L~e~lg~~~v~vaf~s~~Pwl~P~~~wleP~l~d~l~~L---G~krVvV~P~Fl~dG~h~----~~DI~~~ 227 (474)
T 2jh3_A 155 AALETHAQALRERGQFAGVEVVLESREALTPESHAASAVPLSEWPSRV---EAGQAVLVPFLTHLGKHA----AERLQQA 227 (474)
T ss_dssp HHHHHHHHHHHHHCCSSEEEEEECCCC---------CCEEGGGGGGGC---CSSCEEEEECSSCCCHHH----HHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEeCCCCCCcccccccCCHHHHHHHc---CCCeEEEEEeeccCCcch----HHHHHHH
Confidence 4445555555433212357777766577 999999988 999999999866522111 1233332
Q ss_pred HHHhc-cCC-CCCeEEccCCCCChHHHHHHHHHHHHHHhh
Q 021762 243 FREDA-YLS-RLPVSIIRSWYQREGYVNSMADLIQKELGK 280 (308)
Q Consensus 243 ~~e~~-~~~-~i~v~~I~~~~~~p~YI~a~a~~I~e~l~~ 280 (308)
.+... ..+ ++.+..++....+|.++++++++|+++++.
T Consensus 228 ~~~~~~~~p~G~~v~~~~~LG~~p~~~~ll~~rv~eal~~ 267 (474)
T 2jh3_A 228 LAQAAERFPQAPPLHVGGPVGEHPAVAEVVLALAAEGRED 267 (474)
T ss_dssp HHHHHHHCTTCCCEEECCCGGGSTTHHHHHHHHHHTTCSC
T ss_pred HHHHHHhccCCcEEEecCCCCCCHHHHHHHHHHHHHHHhc
Confidence 22211 122 567899999999999999999999988754
No 16
>3fdj_A DEGV family protein; GUT microbiome, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE P6G PG4; 1.80A {Eubacterium eligens} SCOP: c.119.1.0
Probab=54.47 E-value=1e+02 Score=27.73 Aligned_cols=97 Identities=10% Similarity=0.106 Sum_probs=61.3
Q ss_pred CCCCHHHHHHHHHHcCCCEEEEeecCccccccchhhHHHHHHHHHHHhccCCCCCeEEccCCCCChHHHHHH--HHHH--
Q 021762 199 WYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSM--ADLI-- 274 (308)
Q Consensus 199 ~~P~I~eal~~L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~e~~~~~~i~v~~I~~~~~~p~YI~a~--a~~I-- 274 (308)
++|+..+..+.+. |.++|+++++.-..|.| -.+...+.+.+.+. +++.++.+|++-....++--.. |...
T Consensus 61 Sqps~~~~~~~f~--~~~~ii~i~iSs~LSGT--y~sA~~aa~~~~ee--~~~~~I~ViDS~~~s~g~g~~v~~A~~~~~ 134 (278)
T 3fdj_A 61 ACPGIDAWLEAFG--DDDEIFVVTITAGMSGT--YNSAMAARAVYLEE--HPQAKVRVIDSKSTGPQMRIILEQLQQMIE 134 (278)
T ss_dssp ECCCHHHHHHHHT--TCSEEEEEESCTTTCSH--HHHHHHHHHHHHTT--CTTCEEEEEECSSCTHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHh--cCCcEEEEECCCcHhHH--HHHHHHHHHHHHhh--CCCCeEEEEcCCchhHHHHHHHHHHHHHHH
Confidence 6899999888775 78999999988776642 22223344444432 3456799999998887642211 1111
Q ss_pred --------HHHHhhcCCCCceEEEEEeCCCCchhhhhcC
Q 021762 275 --------QKELGKFQKPEEVSFIVVAYTFCMVPLQKFG 305 (308)
Q Consensus 275 --------~e~l~~~~~~~~~~LLFSaHglP~r~v~~~~ 305 (308)
.+.+++. .++..++|+... +.+++|+|
T Consensus 135 ~G~s~~eI~~~l~~~--~~~~~~~f~v~~--L~~L~kGG 169 (278)
T 3fdj_A 135 EGKKFEEIDGAIDAY--MQKTRLFCSLKS--LHNLAQNG 169 (278)
T ss_dssp TTCCHHHHHHHHHHH--HTTEEEEEEESC--CHHHHHTT
T ss_pred cCCCHHHHHHHHHHH--HhcceEEEEECC--hHHHHHCC
Confidence 1112111 145788899888 68888877
No 17
>3jr7_A Uncharacterized EGV family protein COG1307; structural genomics, PSI2, MCSG, protein struct initiative; HET: PG6; 2.00A {Ruminococcus gnavus}
Probab=53.59 E-value=51 Score=30.21 Aligned_cols=98 Identities=18% Similarity=0.167 Sum_probs=60.8
Q ss_pred CCCCHHHHHHHHHHcCCCEEEEeecCccccccchhhHHHHHHHHHHHhccCCCCCeEEccCCCCChHHHHHHHH---HHH
Q 021762 199 WYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMAD---LIQ 275 (308)
Q Consensus 199 ~~P~I~eal~~L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~e~~~~~~i~v~~I~~~~~~p~YI~a~a~---~I~ 275 (308)
++|+..+..+.+.+ +.++|+++++.-..|.| -.+...+.+.+.+. +++.++.+|++-...-++--...+ .++
T Consensus 81 Sqps~~~~~~~f~~-~~~~Ii~i~iSs~LSGT--y~sA~~Aa~~~~e~--~~~~~I~ViDS~~~s~g~g~lv~~Aa~l~~ 155 (298)
T 3jr7_A 81 SCPSPERYMESYHC-DAERIYVVTLSAELSGS--YNSAVLGKNLYEEE--YGEKQIHVFNSRSASVGETLIALKVQQCEK 155 (298)
T ss_dssp ECCCHHHHHHHHCS-SCSEEEEEESCTTTCSH--HHHHHHHHHHHHHH--HCCCEEEEEECSSCTHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHh-cCCeEEEEECCcchhHH--HHHHHHHHHHHHhh--CCCCeEEEECCCchhHHHHHHHHHHHHHHH
Confidence 69999998888875 78999999998876643 22223333334332 245679999999888764322111 111
Q ss_pred ---------HHHhhcCCCCceEEEEEeCCCCchhhhhcC
Q 021762 276 ---------KELGKFQKPEEVSFIVVAYTFCMVPLQKFG 305 (308)
Q Consensus 276 ---------e~l~~~~~~~~~~LLFSaHglP~r~v~~~~ 305 (308)
+.+++. .++..++|.... +.+++|+|
T Consensus 156 ~G~s~eeI~~~l~~~--~~~~~~~f~v~~--L~~L~kGG 190 (298)
T 3jr7_A 156 AGMTFEEVVESVECY--IEEQHTYFVLEN--LDTLRKNG 190 (298)
T ss_dssp TTCCHHHHHHHHHHH--HHHCCEEEECSC--CHHHHHTT
T ss_pred cCCCHHHHHHHHHHH--HhhCeEEEEeCC--hHHHHhCC
Confidence 111111 124567888888 67888877
No 18
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=52.05 E-value=98 Score=28.31 Aligned_cols=54 Identities=11% Similarity=0.023 Sum_probs=34.1
Q ss_pred CCCceeEEeeecCCCCHHHHHHH---HHHcCCCEEEEeecCccc---cccchhhHHHHHHHHHH
Q 021762 187 NLPVNVYVGMRYWYPFTEEAVQQ---IKRDRITRLVVLPLYPQF---SISTTGSSIRVLQNIFR 244 (308)
Q Consensus 187 g~~~~V~~AMrY~~P~I~eal~~---L~~~GidrIVvLPLyPqy---S~sTtgS~~~~l~ea~~ 244 (308)
+..++|..|- +...+.|+++. ..+.|+|-++++| |.| ...|-....+.+....+
T Consensus 75 ~grvpviaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--Pyy~~~~~~s~~~l~~~f~~va~ 134 (309)
T 3fkr_A 75 AGRVPVIVTT--SHYSTQVCAARSLRAQQLGAAMVMAMP--PYHGATFRVPEAQIFEFYARVSD 134 (309)
T ss_dssp TTSSCEEEEC--CCSSHHHHHHHHHHHHHTTCSEEEECC--SCBTTTBCCCHHHHHHHHHHHHH
T ss_pred CCCCcEEEec--CCchHHHHHHHHHHHHHcCCCEEEEcC--CCCccCCCCCHHHHHHHHHHHHH
Confidence 3456676664 67789998884 4456999988887 666 33344444454444443
No 19
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=51.25 E-value=79 Score=28.55 Aligned_cols=52 Identities=17% Similarity=0.190 Sum_probs=34.4
Q ss_pred CCceeEEeeecCCCCHHHHHHHHHH---cCCCEEEEeecCccccccchhhHHHHHHHHH
Q 021762 188 LPVNVYVGMRYWYPFTEEAVQQIKR---DRITRLVVLPLYPQFSISTTGSSIRVLQNIF 243 (308)
Q Consensus 188 ~~~~V~~AMrY~~P~I~eal~~L~~---~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~ 243 (308)
..++|..|- +..+++|+++..+. .|+|-++++| |.|...|-....+.+.+..
T Consensus 69 gr~pviaGv--g~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~s~~~l~~~f~~ia 123 (292)
T 2ojp_A 69 GRIPVIAGT--GANATAEAISLTQRFNDSGIVGCLTVT--PYYNRPSQEGLYQHFKAIA 123 (292)
T ss_dssp TSSCEEEEC--CCSSHHHHHHHHHHTTTSSCSEEEEEC--CCSSCCCHHHHHHHHHHHH
T ss_pred CCCcEEEec--CCccHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHH
Confidence 356666653 77889999986654 5999888887 6666655554445444443
No 20
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=51.06 E-value=37 Score=29.64 Aligned_cols=35 Identities=26% Similarity=0.235 Sum_probs=26.2
Q ss_pred ceEEEEEccCCCC--CcCcHHHHHHhhcCCCCcccCChh
Q 021762 99 KVGVLLLNLGGPD--TLHDVQPFLFNLFADPDIIRLPRL 135 (308)
Q Consensus 99 K~aVLLlNlGgPe--s~~dV~~FL~n~f~D~~VI~lP~~ 135 (308)
..++ .|+|+|+ |..|+-..+.+.+.-|.++++|.|
T Consensus 211 ~~g~--yn~~~~~~~t~~e~~~~ia~~lgrp~~~pvP~~ 247 (298)
T 4b4o_A 211 VHGV--LNGVAPSSATNAEFAQTFGAALGRRAFIPLPSA 247 (298)
T ss_dssp CCEE--EEESCSCCCBHHHHHHHHHHHHTCCCCCCBCHH
T ss_pred CCCe--EEEECCCccCHHHHHHHHHHHhCcCCcccCCHH
Confidence 3564 5666666 667999999999987777788864
No 21
>3pl5_A SMU_165, putative uncharacterized protein; fatty acid binding protein, lipid binding protein; HET: PLM; 2.04A {Streptococcus mutans}
Probab=47.86 E-value=1.1e+02 Score=28.36 Aligned_cols=98 Identities=10% Similarity=0.042 Sum_probs=58.0
Q ss_pred CCCCHHHHHH---HHHHcCCCEEEEeecCccccccchhhHHHHHHHHHHHhccCCCCCeEEccCCCCChHHHHHH--HH-
Q 021762 199 WYPFTEEAVQ---QIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSM--AD- 272 (308)
Q Consensus 199 ~~P~I~eal~---~L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~e~~~~~~i~v~~I~~~~~~p~YI~a~--a~- 272 (308)
++|++.+..+ ++.++| +.|+++++.-..|.| -.+...+.+.+.+. +++.++.+|++-...-+.--.. |.
T Consensus 97 SqPs~~~~~~~f~~l~~~g-~~Ii~I~iSS~LSGT--y~sA~~Aa~~~~e~--~~~~~I~ViDS~~~s~g~g~lv~~Aa~ 171 (320)
T 3pl5_A 97 SQVNVGQFESYFRQSAENG-QEVLYIAFSSVLSGT--YQSAVMARDIVLEE--YPQASIEIVDTLAATGGEGYLAMLAAQ 171 (320)
T ss_dssp ECCCHHHHHHHHHHHHHTT-CCEEEEECCTTTCTH--HHHHHHHHHHHHHH--CTTCCEEEEECCCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCC-CeEEEEecCchHhHH--HHHHHHHHHHHHhh--CCCCeEEEEcCCchHHHHHHHHHHHHH
Confidence 6888876555 566678 899999988776643 22223333434332 3456799999987666532211 11
Q ss_pred HH---------HHHHhhcCCCCceEEEEEeCCCCchhhhhcC
Q 021762 273 LI---------QKELGKFQKPEEVSFIVVAYTFCMVPLQKFG 305 (308)
Q Consensus 273 ~I---------~e~l~~~~~~~~~~LLFSaHglP~r~v~~~~ 305 (308)
.+ .+.+++. .++..++|..-. +.++.|+|
T Consensus 172 l~~~G~s~eeI~~~le~~--~~~~~~~f~v~~--L~yL~kGG 209 (320)
T 3pl5_A 172 AREEGKSLKETKELILDV--GPRLRTFFLVDN--LYHLMRGG 209 (320)
T ss_dssp HHHTTCCHHHHHHHHHHH--GGGEEEEEECSC--SHHHHHHT
T ss_pred HHhcCCCHHHHHHHHHHH--HhhceEEEEECC--hHHHHhCC
Confidence 11 1112111 135778898888 67777777
No 22
>3nyi_A FAT acid-binding protein; stearic acid, DEGV family protein, structural genomics, PSI- protein structure initiative; HET: STE; 1.90A {Eubacterium ventriosum} SCOP: c.119.1.0
Probab=47.13 E-value=84 Score=28.65 Aligned_cols=98 Identities=14% Similarity=0.059 Sum_probs=57.7
Q ss_pred CCCCHHHHHH---HHHHcCCCEEEEeecCccccccchhhHHHHHHHHHHHhccCCCCCeEEccCCCCChHHHHHH--HHH
Q 021762 199 WYPFTEEAVQ---QIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSM--ADL 273 (308)
Q Consensus 199 ~~P~I~eal~---~L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~e~~~~~~i~v~~I~~~~~~p~YI~a~--a~~ 273 (308)
++|+..+..+ ++.++| ++|+++++.-..|.| -.+...+.+.+.+. +++.++.+|++-...-+.--.. |..
T Consensus 66 Sqps~~~~~~~f~~l~~~g-~~ii~i~iSs~LSGT--y~sA~~aa~~~~e~--~~~~~I~ViDS~~~s~g~g~~v~~A~~ 140 (297)
T 3nyi_A 66 SLPSVESYADVFRSFVEQG-FPVVCFTITTLFSGS--YNSAINAKSLVLED--YPDANICVIDSKQNTVTQALLIDQFVR 140 (297)
T ss_dssp ECCCHHHHHHHHHHHHTTT-CCEEEEESCTTTCSH--HHHHHHHHHHHHHH--CTTCCEEEEECSCCHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHCC-CeEEEEECCCcHhHH--HHHHHHHHHHHHhh--CCCCeEEEEeCCchHHHHHHHHHHHHH
Confidence 6888875555 666678 999999998776643 22223333333332 2456799999988765532211 111
Q ss_pred HH----------HHHhhcCCCCceEEEEEeCCCCchhhhhcC
Q 021762 274 IQ----------KELGKFQKPEEVSFIVVAYTFCMVPLQKFG 305 (308)
Q Consensus 274 I~----------e~l~~~~~~~~~~LLFSaHglP~r~v~~~~ 305 (308)
+. +.+++. .++..++|+... +.+++|+|
T Consensus 141 l~~~G~s~~eI~~~l~~~--~~~~~~~f~v~~--L~~L~kGG 178 (297)
T 3nyi_A 141 MLEDGLSFEQAMSKLDAL--MASARIFFTVGS--LDYLKMGG 178 (297)
T ss_dssp HHHTTCCHHHHHHHHHHH--HHHCEEEEECSC--SHHHHHHT
T ss_pred HHHcCCCHHHHHHHHHHH--HhhcEEEEEECC--HHHHHHCC
Confidence 11 111111 134678888888 68888777
No 23
>3mxo_A Serine/threonine-protein phosphatase PGAM5, mitoc; phosphoglycerate mutase family member 5, BXLBV68, MGC protein, structural genomics consortium; HET: PG4 PGE PEG; 1.70A {Homo sapiens} PDB: 3o0t_A
Probab=46.94 E-value=72 Score=26.53 Aligned_cols=44 Identities=25% Similarity=0.225 Sum_probs=31.2
Q ss_pred CCchhHHHHHHHHHHHHHHHhcCCCceeEEeeecCCCCHH--HHHHHHHH
Q 021762 165 GSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTE--EAVQQIKR 212 (308)
Q Consensus 165 gSPL~~iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~--eal~~L~~ 212 (308)
..||.+.-.+||+++.+.|...+..+. .-|..|... ++.+.+.+
T Consensus 30 D~pLt~~G~~qA~~l~~~l~~~~~~~~----~i~sSpl~Ra~qTA~~i~~ 75 (202)
T 3mxo_A 30 DRTLTPLGREQAELTGLRLASLGLKFN----KIVHSSMTRAIETTDIISR 75 (202)
T ss_dssp GCCBCHHHHHHHHHHHHHHHTTCCCCS----EEEEESSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHHHhcCCCCC----EEEECChHHHHHHHHHHHH
Confidence 478999999999999999986433332 345678766 66666654
No 24
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=46.88 E-value=1.6e+02 Score=26.55 Aligned_cols=53 Identities=19% Similarity=0.149 Sum_probs=35.0
Q ss_pred CCceeEEeeecCCCCHHHHHHHH---HHcCCCEEEEeecCccccccchhhHHHHHHHHHH
Q 021762 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (308)
Q Consensus 188 ~~~~V~~AMrY~~P~I~eal~~L---~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~ 244 (308)
..++|..|- +..+++|+++.. .+.|+|-++++| |.|...|-....+.+.+..+
T Consensus 68 grvpviaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~ 123 (294)
T 2ehh_A 68 GRIKVIAGT--GGNATHEAVHLTAHAKEVGADGALVVV--PYYNKPTQRGLYEHFKTVAQ 123 (294)
T ss_dssp TSSEEEEEC--CCSCHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCCcEEEec--CCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 356666653 677899998754 456999888887 66666555555555555444
No 25
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=46.81 E-value=1.1e+02 Score=28.42 Aligned_cols=54 Identities=15% Similarity=0.118 Sum_probs=35.9
Q ss_pred CCceeEEeeecCCCCHHHHHHHH---HHcCCCEEEEeecCccccccchhhHHHHHHHHHHH
Q 021762 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFRE 245 (308)
Q Consensus 188 ~~~~V~~AMrY~~P~I~eal~~L---~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~e 245 (308)
..++|..|- +...++|+++.. .+.|+|-++++| |.|...|-....+.+.+..+.
T Consensus 102 grvpViaGv--g~~st~eai~la~~A~~~Gadavlv~~--P~Y~~~s~~~l~~~f~~VA~a 158 (332)
T 2r8w_A 102 GRRTLMAGI--GALRTDEAVALAKDAEAAGADALLLAP--VSYTPLTQEEAYHHFAAVAGA 158 (332)
T ss_dssp TSSEEEEEE--CCSSHHHHHHHHHHHHHHTCSEEEECC--CCSSCCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEec--CCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHHHh
Confidence 356676663 577899998754 456999888887 667666655555555555443
No 26
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=46.60 E-value=1.5e+02 Score=27.08 Aligned_cols=53 Identities=19% Similarity=0.162 Sum_probs=34.0
Q ss_pred CCceeEEeeecCCCCHHHHHHH---HHHcCCCEEEEeecCccccccchhhHHHHHHHHHH
Q 021762 188 LPVNVYVGMRYWYPFTEEAVQQ---IKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (308)
Q Consensus 188 ~~~~V~~AMrY~~P~I~eal~~---L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~ 244 (308)
..++|..| -+..+++|+++. ..+.|+|-++++| |.|...|-....+.+++..+
T Consensus 91 grvpViaG--vg~~st~eai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~ 146 (314)
T 3qze_A 91 GRIPVIAG--TGANSTREAVALTEAAKSGGADACLLVT--PYYNKPTQEGMYQHFRHIAE 146 (314)
T ss_dssp TSSCEEEE--CCCSSHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCCcEEEe--CCCcCHHHHHHHHHHHHHcCCCEEEEcC--CCCCCCCHHHHHHHHHHHHH
Confidence 35666655 467788888884 4456999888876 55655555555555555444
No 27
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=46.29 E-value=1.2e+02 Score=25.42 Aligned_cols=52 Identities=15% Similarity=0.117 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHhcCCCceeEEeeecCCCC-HHHHHHHHHHcCCCEEEEeecC
Q 021762 171 ITDEQAQALKTALEAKNLPVNVYVGMRYWYPF-TEEAVQQIKRDRITRLVVLPLY 224 (308)
Q Consensus 171 iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~-I~eal~~L~~~GidrIVvLPLy 224 (308)
+..+..+.+++.+.+.|. .+.+......+. -.+.++.+...++|-||+.|..
T Consensus 16 ~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~ 68 (272)
T 3o74_A 16 SYARIAKQLEQGARARGY--QLLIASSDDQPDSERQLQQLFRARRCDALFVASCL 68 (272)
T ss_dssp HHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred hHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEecCc
Confidence 334445555555555443 222222222221 1244555555666666665544
No 28
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=46.15 E-value=77 Score=27.75 Aligned_cols=74 Identities=7% Similarity=0.010 Sum_probs=47.4
Q ss_pred CCch-----hHHHHHHHHHHHHHHHhcCCCceeEEeeecCCCCHHHHHHHHHHcCCCEEEEeecCccccccchhhHHHHH
Q 021762 165 GSPL-----RKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVL 239 (308)
Q Consensus 165 gSPL-----~~iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~eal~~L~~~GidrIVvLPLyPqyS~sTtgS~~~~l 239 (308)
+||- ...|+..++++.+.|.+.|.++++ -.-+....+++..+++.+ .|.||+. +|-|-.+..+.....+
T Consensus 33 gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~--~dL~~~~Dv~~~~~~l~~--aD~iv~~--~P~y~~~~p~~lK~~i 106 (218)
T 3rpe_A 33 AMKEFAHSKGALNLTLTNVAADFLRESGHQVKI--TTVDQGYDIESEIENYLW--ADTIIYQ--MPAWWMGEPWILKKYI 106 (218)
T ss_dssp CCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEE--EEGGGCCCHHHHHHHHHH--CSEEEEE--EECBTTBCCHHHHHHH
T ss_pred eCCCcccCCChHHHHHHHHHHHHHhhCCCEEEE--EECCCccCHHHHHHHHHh--CCEEEEE--CChHhccCCHHHHHHH
Confidence 5663 468899999999999877655543 333446678888888875 4544443 5655555555554555
Q ss_pred HHHHH
Q 021762 240 QNIFR 244 (308)
Q Consensus 240 ~ea~~ 244 (308)
++.+.
T Consensus 107 D~v~~ 111 (218)
T 3rpe_A 107 DEVFT 111 (218)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 55543
No 29
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=45.92 E-value=1e+02 Score=27.78 Aligned_cols=54 Identities=17% Similarity=0.206 Sum_probs=35.1
Q ss_pred CCCceeEEeeecCCCCHHHHHHHH---HHcCCCEEEEeecCccccccchhhHHHHHHHHHH
Q 021762 187 NLPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (308)
Q Consensus 187 g~~~~V~~AMrY~~P~I~eal~~L---~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~ 244 (308)
+..++|..| -+..+++++++.. .+.|+|-++++| |.|...|-....+.+.+..+
T Consensus 69 ~grvpviaG--vg~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~~~~~l~~~f~~ia~ 125 (292)
T 3daq_A 69 DKRVPVIAG--TGTNDTEKSIQASIQAKALGADAIMLIT--PYYNKTNQRGLVKHFEAIAD 125 (292)
T ss_dssp TTSSCEEEE--CCCSCHHHHHHHHHHHHHHTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCCCcEEEe--CCcccHHHHHHHHHHHHHcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 345777766 4678899999854 456999888886 55555555445555544443
No 30
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=45.88 E-value=14 Score=26.98 Aligned_cols=47 Identities=17% Similarity=0.196 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHhcCCC---------ceeEEeeecCCCCHHHHHHHHHHcCCCEEE
Q 021762 173 DEQAQALKTALEAKNLP---------VNVYVGMRYWYPFTEEAVQQIKRDRITRLV 219 (308)
Q Consensus 173 ~~Qa~aL~~~L~~~g~~---------~~V~~AMrY~~P~I~eal~~L~~~GidrIV 219 (308)
++.|++|.+.|...|.+ +.|.+|---..--.+.+.++|++.|++..+
T Consensus 20 ~~~A~~l~~~L~~~G~~a~i~~~~~~yRV~vGpf~s~~~A~~~~~~L~~~g~~~~i 75 (81)
T 1uta_A 20 AEQAETVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADSTLNRLKMAGHTNCI 75 (81)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECSSSEEEEESSCBTTTHHHHHHHHHHHHCCSCCB
T ss_pred HHHHHHHHHHHHhCCCCeEEEeCCcEEEEEECCcCCHHHHHHHHHHHHHcCCCcEE
Confidence 45677777777665543 344443222222233444455555555443
No 31
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=45.66 E-value=1.7e+02 Score=26.43 Aligned_cols=53 Identities=15% Similarity=0.114 Sum_probs=34.3
Q ss_pred CCceeEEeeecCCCCHHHHHHH---HHHcCCCEEEEeecCccccccchhhHHHHHHHHHH
Q 021762 188 LPVNVYVGMRYWYPFTEEAVQQ---IKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (308)
Q Consensus 188 ~~~~V~~AMrY~~P~I~eal~~---L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~ 244 (308)
..++|..| -+...++|+++. ..+.|+|-++++| |.|...|-....+.+++..+
T Consensus 75 grvpviaG--vg~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~~~~~l~~~f~~va~ 130 (297)
T 3flu_A 75 KRVPVIAG--TGANNTVEAIALSQAAEKAGADYTLSVV--PYYNKPSQEGIYQHFKTIAE 130 (297)
T ss_dssp TSSCEEEE--CCCSSHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCCcEEEe--CCCcCHHHHHHHHHHHHHcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 35666665 467889998884 4456999888876 55665555445555544444
No 32
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=45.56 E-value=1.7e+02 Score=26.58 Aligned_cols=53 Identities=15% Similarity=0.140 Sum_probs=34.6
Q ss_pred CCceeEEeeecCCCCHHHHHHHH---HHcCCCEEEEeecCccccccchhhHHHHHHHHHH
Q 021762 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (308)
Q Consensus 188 ~~~~V~~AMrY~~P~I~eal~~L---~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~ 244 (308)
..++|..|- +..+++|+++.. ++.|+|-++++| |.|...|-....+.+.+..+
T Consensus 84 grvpviaGv--g~~st~~ai~la~~A~~~Gadavlv~~--P~y~~~~~~~l~~~f~~ia~ 139 (304)
T 3cpr_A 84 DRAKLIAGV--GTNNTRTSVELAEAAASAGADGLLVVT--PYYSKPSQEGLLAHFGAIAA 139 (304)
T ss_dssp TTSEEEEEC--CCSCHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCCcEEecC--CCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 356666653 678899998754 456999888887 56665555555555554443
No 33
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=45.55 E-value=1.1e+02 Score=26.31 Aligned_cols=13 Identities=15% Similarity=0.299 Sum_probs=6.3
Q ss_pred HHHHHHHHHcCCC
Q 021762 204 EEAVQQIKRDRIT 216 (308)
Q Consensus 204 ~eal~~L~~~Gid 216 (308)
.+.++++.+.|+-
T Consensus 76 ~~~~~~~~~~giP 88 (297)
T 3rot_A 76 SKSLQRANKLNIP 88 (297)
T ss_dssp HHHHHHHHHHTCC
T ss_pred HHHHHHHHHCCCC
Confidence 4445555554543
No 34
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=45.41 E-value=1.5e+02 Score=26.59 Aligned_cols=76 Identities=17% Similarity=0.226 Sum_probs=43.8
Q ss_pred CCCchhHHHHHHHHHHHHHHHhcCCCceeEEeeecCCCCHHHHHHHH---HHcCCCEEEEeecCccccccchhhHHHHHH
Q 021762 164 GGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQ 240 (308)
Q Consensus 164 ggSPL~~iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~eal~~L---~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ 240 (308)
|-+|.....+. .+-++...+..+..++|..|- +...++|+++.. ++.|+|-++++| |.|...|-....+.+.
T Consensus 45 GE~~~Ls~~Er-~~v~~~~~~~~~gr~pviaGv--g~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~s~~~l~~~f~ 119 (289)
T 2yxg_A 45 GESPTLSHEEH-KKVIEKVVDVVNGRVQVIAGA--GSNCTEEAIELSVFAEDVGADAVLSIT--PYYNKPTQEGLRKHFG 119 (289)
T ss_dssp TTGGGSCHHHH-HHHHHHHHHHHTTSSEEEEEC--CCSSHHHHHHHHHHHHHHTCSEEEEEC--CCSSCCCHHHHHHHHH
T ss_pred cChhhCCHHHH-HHHHHHHHHHhCCCCcEEEeC--CCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHH
Confidence 44565433322 222333333323356676663 677899998754 456999888887 6676666555555555
Q ss_pred HHHH
Q 021762 241 NIFR 244 (308)
Q Consensus 241 ea~~ 244 (308)
+..+
T Consensus 120 ~ia~ 123 (289)
T 2yxg_A 120 KVAE 123 (289)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5444
No 35
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=43.52 E-value=1.5e+02 Score=27.05 Aligned_cols=54 Identities=13% Similarity=0.059 Sum_probs=33.7
Q ss_pred CCceeEEeeecCCCCHHHHHHH---HHHcCCCEEEEeecCccccccchhhHHHHHHHHHHH
Q 021762 188 LPVNVYVGMRYWYPFTEEAVQQ---IKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFRE 245 (308)
Q Consensus 188 ~~~~V~~AMrY~~P~I~eal~~---L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~e 245 (308)
..++|..| -+...++|+++. ..+.|+|-++++| |.|...|-....+.+++..+.
T Consensus 92 grvpViaG--vg~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~a 148 (315)
T 3na8_A 92 HRVPTIVS--VSDLTTAKTVRRAQFAESLGAEAVMVLP--ISYWKLNEAEVFQHYRAVGEA 148 (315)
T ss_dssp TSSCBEEE--CCCSSHHHHHHHHHHHHHTTCSEEEECC--CCSSCCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEe--cCCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHHHh
Confidence 35666665 367788888884 4456999877766 555555555555555544443
No 36
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=43.43 E-value=99 Score=28.20 Aligned_cols=52 Identities=15% Similarity=0.119 Sum_probs=33.4
Q ss_pred CCCceeEEeeecCCCCHHHHHHHHH---HcCCCEEEEeecCccccccchhhHHHHHHHH
Q 021762 187 NLPVNVYVGMRYWYPFTEEAVQQIK---RDRITRLVVLPLYPQFSISTTGSSIRVLQNI 242 (308)
Q Consensus 187 g~~~~V~~AMrY~~P~I~eal~~L~---~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea 242 (308)
+..++|..| -+...++|+++..+ +.|+|-++++| |.|...|-....+.+.+.
T Consensus 82 ~grvpviaG--vg~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~s~~~l~~~f~~v 136 (304)
T 3l21_A 82 GDRARVIAG--AGTYDTAHSIRLAKACAAEGAHGLLVVT--PYYSKPPQRGLQAHFTAV 136 (304)
T ss_dssp TTTSEEEEE--CCCSCHHHHHHHHHHHHHHTCSEEEEEC--CCSSCCCHHHHHHHHHHH
T ss_pred CCCCeEEEe--CCCCCHHHHHHHHHHHHHcCCCEEEECC--CCCCCCCHHHHHHHHHHH
Confidence 346777776 46788899988543 56999888876 556555544444444443
No 37
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=43.42 E-value=1.7e+02 Score=26.56 Aligned_cols=53 Identities=11% Similarity=0.157 Sum_probs=34.4
Q ss_pred CCceeEEeeecCCCCHHHHHHHH---HHcCCCEEEEeecCccccccchhhHHHHHHHHHH
Q 021762 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (308)
Q Consensus 188 ~~~~V~~AMrY~~P~I~eal~~L---~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~ 244 (308)
.+++|..|- +...++|+++.. .+.|+|-++++| |.|...|-....+.+.+..+
T Consensus 80 grvpViaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~ 135 (301)
T 1xky_A 80 KRVPVIAGT--GSNNTHASIDLTKKATEVGVDAVMLVA--PYYNKPSQEGMYQHFKAIAE 135 (301)
T ss_dssp TSSCEEEEC--CCSCHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCceEEeCC--CCCCHHHHHHHHHHHHhcCCCEEEEcC--CCCCCCCHHHHHHHHHHHHH
Confidence 356666653 677889988754 456999888877 66666555555555544443
No 38
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=43.33 E-value=1.2e+02 Score=27.69 Aligned_cols=53 Identities=13% Similarity=0.055 Sum_probs=35.1
Q ss_pred CCceeEEeeecCCCCHHHHHHHH---HHcCCCEEEEeecCccccccchhhHHHHHHHHHH
Q 021762 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (308)
Q Consensus 188 ~~~~V~~AMrY~~P~I~eal~~L---~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~ 244 (308)
.+++|..|- +..+++++++.. .+.|+|-++++| |.|...|-....+.+.+..+
T Consensus 79 grvpViaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~ 134 (303)
T 2wkj_A 79 GKIKLIAHV--GCVSTAESQQLAASAKRYGFDAVSAVT--PFYYPFSFEEHCDHYRAIID 134 (303)
T ss_dssp TTSEEEEEC--CCSSHHHHHHHHHHHHHHTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCCcEEEec--CCCCHHHHHHHHHHHHhCCCCEEEecC--CCCCCCCHHHHHHHHHHHHH
Confidence 356777663 677899998754 456999888887 56665555555555554443
No 39
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=42.77 E-value=1.2e+02 Score=27.29 Aligned_cols=53 Identities=13% Similarity=-0.011 Sum_probs=34.5
Q ss_pred CCceeEEeeecCCCCHHHHHHHHH---HcCCCEEEEeecCccccccchhhHHHHHHHHHH
Q 021762 188 LPVNVYVGMRYWYPFTEEAVQQIK---RDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (308)
Q Consensus 188 ~~~~V~~AMrY~~P~I~eal~~L~---~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~ 244 (308)
.+++|..|- +..+++|+++..+ +.|+|-++++| |.|...|-....+.+.+..+
T Consensus 72 grvpviaGv--g~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~~~~~l~~~f~~va~ 127 (293)
T 1f6k_A 72 DQIALIAQV--GSVNLKEAVELGKYATELGYDCLSAVT--PFYYKFSFPEIKHYYDTIIA 127 (293)
T ss_dssp TSSEEEEEC--CCSCHHHHHHHHHHHHHHTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCCeEEEec--CCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 356666653 6778999987544 46999888887 56665555545555544443
No 40
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=42.51 E-value=1.8e+02 Score=26.64 Aligned_cols=54 Identities=19% Similarity=0.190 Sum_probs=35.0
Q ss_pred CCceeEEeeecCCCCHHHHHHH---HHHcCCCEEEEeecCccccccchhhHHHHHHHHHHH
Q 021762 188 LPVNVYVGMRYWYPFTEEAVQQ---IKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFRE 245 (308)
Q Consensus 188 ~~~~V~~AMrY~~P~I~eal~~---L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~e 245 (308)
..++|..| -+..++.++++. ..+.|+|-++++| |.|...|-....+.+.+..+.
T Consensus 90 grvpViaG--vg~~st~~ai~la~~A~~~Gadavlv~~--P~y~~~~~~~l~~~f~~va~a 146 (315)
T 3si9_A 90 KRVPVVAG--AGSNSTSEAVELAKHAEKAGADAVLVVT--PYYNRPNQRGLYTHFSSIAKA 146 (315)
T ss_dssp TSSCBEEE--CCCSSHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEe--CCCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHHHc
Confidence 35666665 467789999884 4457999888876 566665555555555544443
No 41
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=42.22 E-value=1.4e+02 Score=27.24 Aligned_cols=50 Identities=20% Similarity=0.257 Sum_probs=31.5
Q ss_pred CceeEEeeecCCCCHHHHHHHHH---HcCCCEEEEeecCccccccchhhHHHHHHHH
Q 021762 189 PVNVYVGMRYWYPFTEEAVQQIK---RDRITRLVVLPLYPQFSISTTGSSIRVLQNI 242 (308)
Q Consensus 189 ~~~V~~AMrY~~P~I~eal~~L~---~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea 242 (308)
.++|..|- +..+++|+++..+ +.|+|-++++| |.|...|-....+.+.+.
T Consensus 81 rvpViaGv--g~~st~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~v 133 (306)
T 1o5k_A 81 KIPVIVGA--GTNSTEKTLKLVKQAEKLGANGVLVVT--PYYNKPTQEGLYQHYKYI 133 (306)
T ss_dssp SSCEEEEC--CCSCHHHHHHHHHHHHHHTCSEEEEEC--CCSSCCCHHHHHHHHHHH
T ss_pred CCeEEEcC--CCccHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHH
Confidence 56666553 6678888887543 46999888876 556555554444444443
No 42
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=42.00 E-value=1.5e+02 Score=26.86 Aligned_cols=52 Identities=12% Similarity=0.101 Sum_probs=35.2
Q ss_pred CceeEEeeecCCCCHHHHHHHH---HHcCCCEEEEeecCccccccchhhHHHHHHHHHH
Q 021762 189 PVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (308)
Q Consensus 189 ~~~V~~AMrY~~P~I~eal~~L---~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~ 244 (308)
.++|..|- +..+++|+++.. .+.|+|-++++| |.|...|-....+.+.+..+
T Consensus 69 rvpviaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~ 123 (297)
T 2rfg_A 69 RVPVIAGA--GSNNPVEAVRYAQHAQQAGADAVLCVA--GYYNRPSQEGLYQHFKMVHD 123 (297)
T ss_dssp SSCBEEEC--CCSSHHHHHHHHHHHHHHTCSEEEECC--CTTTCCCHHHHHHHHHHHHH
T ss_pred CCeEEEcc--CCCCHHHHHHHHHHHHhcCCCEEEEcC--CCCCCCCHHHHHHHHHHHHH
Confidence 56666653 677899998754 456999888887 66766665555555555444
No 43
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=41.45 E-value=1.9e+02 Score=26.44 Aligned_cols=52 Identities=15% Similarity=0.204 Sum_probs=34.6
Q ss_pred CCceeEEeeecCCCCHHHHHHHH---HHcCCCEEEEeecCccccccchhhHHHHHHHHHH
Q 021762 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (308)
Q Consensus 188 ~~~~V~~AMrY~~P~I~eal~~L---~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~ 244 (308)
..++|..|- +. +++++++.. .+.|+|-++++| |.|...|-....+.+.+..+
T Consensus 80 grvpViaGv--g~-st~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~ 134 (314)
T 3d0c_A 80 GRATVVAGI--GY-SVDTAIELGKSAIDSGADCVMIHQ--PVHPYITDAGAVEYYRNIIE 134 (314)
T ss_dssp TSSEEEEEE--CS-SHHHHHHHHHHHHHTTCSEEEECC--CCCSCCCHHHHHHHHHHHHH
T ss_pred CCCeEEecC--Cc-CHHHHHHHHHHHHHcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 367777765 55 899998754 456999888886 66666555555555555444
No 44
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=41.43 E-value=1.5e+02 Score=26.87 Aligned_cols=52 Identities=21% Similarity=0.196 Sum_probs=34.5
Q ss_pred CceeEEeeecCCCCHHHHHHHH---HHcCCCEEEEeecCccccccchhhHHHHHHHHHH
Q 021762 189 PVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (308)
Q Consensus 189 ~~~V~~AMrY~~P~I~eal~~L---~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~ 244 (308)
.++|..| -+...++|+++.. .+.|+|-++++| |.|...|-....+.+.+..+
T Consensus 77 rvpviaG--vg~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~ 131 (301)
T 3m5v_A 77 KVKVLAG--AGSNATHEAVGLAKFAKEHGADGILSVA--PYYNKPTQQGLYEHYKAIAQ 131 (301)
T ss_dssp SCEEEEE--CCCSSHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCeEEEe--CCCCCHHHHHHHHHHHHHcCCCEEEEcC--CCCCCCCHHHHHHHHHHHHH
Confidence 5667665 4678899998854 456999888876 55655555555555554444
No 45
>3lub_A Putative creatinine amidohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Bacteroides fragilis}
Probab=41.12 E-value=53 Score=29.45 Aligned_cols=51 Identities=14% Similarity=0.213 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHhc-CCCceeEEeeecCC--------C------------CHHHHHHHHHHcCCCEEEEee
Q 021762 172 TDEQAQALKTALEAK-NLPVNVYVGMRYWY--------P------------FTEEAVQQIKRDRITRLVVLP 222 (308)
Q Consensus 172 T~~Qa~aL~~~L~~~-g~~~~V~~AMrY~~--------P------------~I~eal~~L~~~GidrIVvLP 222 (308)
.+..++++.++|.++ +.++.|...+.|+. | .+.|.++.|.+.|++++|++-
T Consensus 47 a~~ia~~~a~~l~~~~~~~~lv~P~i~yG~~s~~h~~fPGTisl~~~tl~~~l~di~~sl~~~G~rrlvivN 118 (254)
T 3lub_A 47 PHDIAVEAAELALSRSGVRCMVMPPVPFGAHNPGQRELPFCIHTRYATQQAILEDIVSSLHVQGFRKLLILS 118 (254)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEECCCBCCBCCCTTTTTSTTCCBCCHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHhhhhhcCCCEEEeCCccccCCCccccCcCCeEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEe
Confidence 344555555555443 44566666666665 2 167788888889999999886
No 46
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=40.77 E-value=2e+02 Score=25.78 Aligned_cols=53 Identities=15% Similarity=0.133 Sum_probs=34.0
Q ss_pred CCceeEEeeecCCCCHHHHHHH---HHHcCCCEEEEeecCccccccchhhHHHHHHHHHH
Q 021762 188 LPVNVYVGMRYWYPFTEEAVQQ---IKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (308)
Q Consensus 188 ~~~~V~~AMrY~~P~I~eal~~---L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~ 244 (308)
..++|..| -+...++|+++. .++.|+|-++++| |.|...|-....+.+.+..+
T Consensus 69 gr~pviaG--vg~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~~~~~l~~~f~~ia~ 124 (291)
T 3tak_A 69 KRIPIIAG--TGANSTREAIELTKAAKDLGADAALLVT--PYYNKPTQEGLYQHYKAIAE 124 (291)
T ss_dssp TSSCEEEE--CCCSSHHHHHHHHHHHHHHTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCCeEEEe--CCCCCHHHHHHHHHHHHhcCCCEEEEcC--CCCCCCCHHHHHHHHHHHHH
Confidence 35666665 467789999884 4456999888876 55555555445555544444
No 47
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=40.59 E-value=29 Score=24.90 Aligned_cols=46 Identities=17% Similarity=0.177 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHhcCCC---------ceeEEeeecCCCCHHHHHHHHHHcCCCEE
Q 021762 173 DEQAQALKTALEAKNLP---------VNVYVGMRYWYPFTEEAVQQIKRDRITRL 218 (308)
Q Consensus 173 ~~Qa~aL~~~L~~~g~~---------~~V~~AMrY~~P~I~eal~~L~~~GidrI 218 (308)
++.|+.+.+.|...|.+ +.|.+|---..--.++++++|+..|++-.
T Consensus 20 ~~~A~~~~~~L~~~g~~~~i~~~~~~yRV~vGpf~~~~~A~~~~~~L~~~g~~~~ 74 (79)
T 1x60_A 20 KANADSLASNAEAKGFDSIVLLKDGLYKVQIGAFSSKDNADTLAARAKNAGFDAI 74 (79)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHHTSCCE
T ss_pred HHHHHHHHHHHHhCCCCeEEecCCcEEEEEECCcCCHHHHHHHHHHHHHcCCceE
Confidence 55677777777665533 34444421122223344455555566433
No 48
>4emb_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.30A {Borrelia burgdorferi}
Probab=40.51 E-value=61 Score=28.50 Aligned_cols=54 Identities=9% Similarity=0.068 Sum_probs=36.4
Q ss_pred CCchhHHHHHHHHHHHHHHHhcCCCceeEEeeecCCCCHH--HHHHHHHHc-CC--CEEEEee
Q 021762 165 GSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTE--EAVQQIKRD-RI--TRLVVLP 222 (308)
Q Consensus 165 gSPL~~iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~--eal~~L~~~-Gi--drIVvLP 222 (308)
.+||.+.-++||+++.+.|.+.+..+. .-|..|... ++.+.+.+. |. -.+++.|
T Consensus 51 D~pLT~~G~~QA~~l~~~L~~~~~~~d----~v~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~ 109 (274)
T 4emb_A 51 DVKLSDKGIDEAVEAGLLLKQEGYSFD----IAFSSLLSRANDTLNIILRELGQSYISVKKTW 109 (274)
T ss_dssp CCCBCHHHHHHHHHHHHHHHHTTCCCS----EEEECSSHHHHHHHHHHHHHTTCTTSEEEECG
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCCC----EEEECChHHHHHHHHHHHHhcCCCCCCeeECc
Confidence 479999999999999999986544333 335688876 566655442 32 2455555
No 49
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=40.50 E-value=1.2e+02 Score=24.58 Aligned_cols=29 Identities=10% Similarity=0.076 Sum_probs=21.4
Q ss_pred CCch--hHHHHHHHHHHHHHHHhcCCCceeE
Q 021762 165 GSPL--RKITDEQAQALKTALEAKNLPVNVY 193 (308)
Q Consensus 165 gSPL--~~iT~~Qa~aL~~~L~~~g~~~~V~ 193 (308)
+||- ...|+..++.+.+.|.+.|.+.+|.
T Consensus 9 ~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~ 39 (201)
T 1t5b_A 9 SSILAGYSQSGQLTDYFIEQWREKHVADEIT 39 (201)
T ss_dssp CCSSGGGCHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred eCCCCCCChHHHHHHHHHHHHHHhCCCCeEE
Confidence 5776 4789999999999998766333443
No 50
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=40.43 E-value=1.8e+02 Score=27.07 Aligned_cols=52 Identities=17% Similarity=0.243 Sum_probs=33.0
Q ss_pred CceeEEeeecCCCCHHHHHHHHH---HcCCCEEEEeecCccccccchhhHHHHHHHHHH
Q 021762 189 PVNVYVGMRYWYPFTEEAVQQIK---RDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (308)
Q Consensus 189 ~~~V~~AMrY~~P~I~eal~~L~---~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~ 244 (308)
.++|..| -+..+++|+++..+ +.|+|-++++| |.|...|-....+.+.+..+
T Consensus 100 rvpViaG--vg~~st~eai~la~~A~~~Gadavlv~~--P~Y~~~s~~~l~~~f~~VA~ 154 (343)
T 2v9d_A 100 RVPVLIG--TGGTNARETIELSQHAQQAGADGIVVIN--PYYWKVSEANLIRYFEQVAD 154 (343)
T ss_dssp SSCEEEE--CCSSCHHHHHHHHHHHHHHTCSEEEEEC--CSSSCCCHHHHHHHHHHHHH
T ss_pred CCcEEEe--cCCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 5666655 35678888887543 46999888876 55665555555555544433
No 51
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=40.39 E-value=2e+02 Score=25.82 Aligned_cols=52 Identities=17% Similarity=0.204 Sum_probs=33.8
Q ss_pred CceeEEeeecCCCCHHHHHHHH---HHcCCCEEEEeecCccccccchhhHHHHHHHHHH
Q 021762 189 PVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (308)
Q Consensus 189 ~~~V~~AMrY~~P~I~eal~~L---~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~ 244 (308)
.++|..|- +..+++++++.. .+.|+|-++++| |.|...|-....+.+.+..+
T Consensus 69 r~pviaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~ia~ 123 (292)
T 2vc6_A 69 RVPVIAGA--GSNSTAEAIAFVRHAQNAGADGVLIVS--PYYNKPTQEGIYQHFKAIDA 123 (292)
T ss_dssp SSCBEEEC--CCSSHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCcEEEec--CCccHHHHHHHHHHHHHcCCCEEEEcC--CCCCCCCHHHHHHHHHHHHH
Confidence 56666553 567889988754 456999888877 56665555555555544443
No 52
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=37.76 E-value=1e+02 Score=28.20 Aligned_cols=53 Identities=19% Similarity=0.215 Sum_probs=34.2
Q ss_pred CCCceeEEeeecCCCCHHHHHHHH---HHcCCCEEEEeecCccccccchhhHHHHHHHHHH
Q 021762 187 NLPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (308)
Q Consensus 187 g~~~~V~~AMrY~~P~I~eal~~L---~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~ 244 (308)
+..++|..|- +. .++|+++.. .+.|+|-++++| |.|...|-....+.+.+..+
T Consensus 79 ~grvpViaGv--g~-~t~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~ 134 (316)
T 3e96_A 79 HGRALVVAGI--GY-ATSTAIELGNAAKAAGADAVMIHM--PIHPYVTAGGVYAYFRDIIE 134 (316)
T ss_dssp TTSSEEEEEE--CS-SHHHHHHHHHHHHHHTCSEEEECC--CCCSCCCHHHHHHHHHHHHH
T ss_pred CCCCcEEEEe--Cc-CHHHHHHHHHHHHhcCCCEEEEcC--CCCCCCCHHHHHHHHHHHHH
Confidence 3467888886 45 899999854 456999988874 44444455445555554444
No 53
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=37.44 E-value=1.6e+02 Score=25.12 Aligned_cols=47 Identities=17% Similarity=0.175 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHhcCCCceeEEeeecCCCCHHHHHHHHHHcCCCEEEEee
Q 021762 174 EQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLP 222 (308)
Q Consensus 174 ~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~eal~~L~~~GidrIVvLP 222 (308)
+..+.+++.+.+.| +.+.+......+.-.+.++.|...++|-||++|
T Consensus 28 ~~~~gi~~~a~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~ 74 (289)
T 3k9c_A 28 DLVEQIYAAATRRG--YDVMLSAVAPSRAEKVAVQALMRERCEAAILLG 74 (289)
T ss_dssp HHHHHHHHHHHHTT--CEEEEEEEBTTBCHHHHHHHHTTTTEEEEEEET
T ss_pred HHHHHHHHHHHHCC--CEEEEEeCCCCHHHHHHHHHHHhCCCCEEEEEC
Confidence 34444444444443 223332222323344455555555555555554
No 54
>2g7z_A Conserved hypothetical protein SPY1493; long-fatty acid binding protein, lipid binding protein, PSI, structural genomics; HET: MSE HXA; 2.05A {Streptococcus pyogenes}
Probab=36.94 E-value=1.9e+02 Score=26.04 Aligned_cols=94 Identities=16% Similarity=0.200 Sum_probs=56.2
Q ss_pred CCCCHHHHHH---HHHHcCCCEEEEeecCccccccchhhHHHHHHHHHHHhccCCCCCeEEccCCCCChHHHHHHHH---
Q 021762 199 WYPFTEEAVQ---QIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMAD--- 272 (308)
Q Consensus 199 ~~P~I~eal~---~L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~e~~~~~~i~v~~I~~~~~~p~YI~a~a~--- 272 (308)
++|++.+..+ ++.++|.++|+++++.-..|.| -.+...+.+ +. ..++.+|++-...-+.--...+
T Consensus 66 Sqps~~~~~~~f~~l~~~gy~~ii~i~iSs~LSGT--y~sA~~aa~-~~------~~~I~ViDS~~~s~g~g~~v~~A~~ 136 (282)
T 2g7z_A 66 SQPPVGLFAETYENLVKKGVTDIVAIHLSPALSGT--IEASRQGAE-IA------EAPVTVLDSGFTDQAMKFQVVEAAK 136 (282)
T ss_dssp ECCCHHHHHHHHHHHHHTTCCEEEEEECCTTTCTH--HHHHHHHHH-HH------TCCEEEEECSSCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCeEEEEECCCcHhHH--HHHHHHHHh-CC------CCeEEEECCCchhHHHHHHHHHHHH
Confidence 6888776555 5557888999999998876643 112222333 32 2469999998766553222111
Q ss_pred H---------HHHHHhhcCCCCceEEEEEeCCCCchhhhhcC
Q 021762 273 L---------IQKELGKFQKPEEVSFIVVAYTFCMVPLQKFG 305 (308)
Q Consensus 273 ~---------I~e~l~~~~~~~~~~LLFSaHglP~r~v~~~~ 305 (308)
. |.+.+++. .++..++|.... +.+++|+|
T Consensus 137 l~~~G~s~~eI~~~l~~~--~~~~~~~f~v~~--L~~L~kGG 174 (282)
T 2g7z_A 137 MAKAGASLNEILAAVQAI--KSKTELYIGVST--LENLVKGG 174 (282)
T ss_dssp HHHHTCCHHHHHHHHHHH--HHTEEEEEEESC--SHHHHHHS
T ss_pred HHHcCCCHHHHHHHHHHH--HhhcEEEEEECC--hHHHHhCC
Confidence 1 11111111 135678898888 77888777
No 55
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=36.87 E-value=61 Score=26.76 Aligned_cols=105 Identities=15% Similarity=0.119 Sum_probs=59.5
Q ss_pred ceEEEEEccCCCCCcCcHH-HHHHhhcC--CCCcccCChhhhhhhhHHHHHHHhccchhhHHhhcccCCCCchhHHHHHH
Q 021762 99 KVGVLLLNLGGPDTLHDVQ-PFLFNLFA--DPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQ 175 (308)
Q Consensus 99 K~aVLLlNlGgPes~~dV~-~FL~n~f~--D~~VI~lP~~~~~~~~~L~~~Ia~~R~~ks~~~Y~~IGggSPL~~iT~~Q 175 (308)
+.-|||...|+ + .-|+. .|+..+|. +=+|+.++.. -|...++...+ ......|| -|=+...+..+
T Consensus 18 ~~~vlla~~~g-d-~HdiG~~~va~~l~~~G~eVi~lG~~-----~p~e~lv~aa~----~~~~diV~-lS~~~~~~~~~ 85 (161)
T 2yxb_A 18 RYKVLVAKMGL-D-GHDRGAKVVARALRDAGFEVVYTGLR-----QTPEQVAMAAV----QEDVDVIG-VSILNGAHLHL 85 (161)
T ss_dssp SCEEEEEEESS-S-SCCHHHHHHHHHHHHTTCEEECCCSB-----CCHHHHHHHHH----HTTCSEEE-EEESSSCHHHH
T ss_pred CCEEEEEeCCC-C-ccHHHHHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHH----hcCCCEEE-EEeechhhHHH
Confidence 34578888887 3 22332 34444443 3467766421 23444544332 23334454 34444456667
Q ss_pred HHHHHHHHHhcCC-CceeEEeeecCCCCHHHHHHHHHHcCCCEEE
Q 021762 176 AQALKTALEAKNL-PVNVYVGMRYWYPFTEEAVQQIKRDRITRLV 219 (308)
Q Consensus 176 a~aL~~~L~~~g~-~~~V~~AMrY~~P~I~eal~~L~~~GidrIV 219 (308)
...+.+.|.+.+. ++.|.+| +.|..++ .+.+.+.|+|.++
T Consensus 86 ~~~~i~~L~~~g~~~i~v~vG---G~~~~~~-~~~l~~~G~d~v~ 126 (161)
T 2yxb_A 86 MKRLMAKLRELGADDIPVVLG---GTIPIPD-LEPLRSLGIREIF 126 (161)
T ss_dssp HHHHHHHHHHTTCTTSCEEEE---ECCCHHH-HHHHHHTTCCEEE
T ss_pred HHHHHHHHHhcCCCCCEEEEe---CCCchhc-HHHHHHCCCcEEE
Confidence 7777777777664 6888888 6665544 4567778998543
No 56
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=36.82 E-value=1.2e+02 Score=27.53 Aligned_cols=55 Identities=13% Similarity=0.072 Sum_probs=33.3
Q ss_pred CCCceeEEeeecCCCCHHHHHHHH---HHcCCCEEEEeecCccccccchhhHHHHHHHHHHH
Q 021762 187 NLPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFRE 245 (308)
Q Consensus 187 g~~~~V~~AMrY~~P~I~eal~~L---~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~e 245 (308)
+..++|..|- +...++|+++.. .+.|+|-++++| |.|...|-....+.+++..+.
T Consensus 71 ~grvpviaGv--g~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~~~~~l~~~f~~va~a 128 (300)
T 3eb2_A 71 QRRVPVVAGV--ASTSVADAVAQAKLYEKLGADGILAIL--EAYFPLKDAQIESYFRAIADA 128 (300)
T ss_dssp TTSSCBEEEE--EESSHHHHHHHHHHHHHHTCSEEEEEE--CCSSCCCHHHHHHHHHHHHHH
T ss_pred CCCCcEEEeC--CCCCHHHHHHHHHHHHHcCCCEEEEcC--CCCCCCCHHHHHHHHHHHHHH
Confidence 3355565552 456788888744 456999888877 555555555555555544443
No 57
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=35.99 E-value=2.2e+02 Score=25.46 Aligned_cols=87 Identities=13% Similarity=0.215 Sum_probs=55.1
Q ss_pred CceeEEeeecCCCCHHHHHHHHHHcCCCEEEEeecCcccc------------ccchhhHHHHHHHHHHHhccCCCCCeEE
Q 021762 189 PVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFS------------ISTTGSSIRVLQNIFREDAYLSRLPVSI 256 (308)
Q Consensus 189 ~~~V~~AMrY~~P~I~eal~~L~~~GidrIVvLPLyPqyS------------~sTtgS~~~~l~ea~~e~~~~~~i~v~~ 256 (308)
+++|.+|.-=..|+..+..+..++.|.+-++=+||-|.-- ..+.....+.++.++.......++.=..
T Consensus 27 p~pvT~Ai~P~~p~~~~~a~~A~~~G~EvllHlPMep~~~~~~~~gp~~L~~~~s~~ei~~~l~~al~~vP~a~GvnNHm 106 (245)
T 2nly_A 27 EIPVTVAVMPFLEHSTKQAEIAQAAGLEVIVHMPLEPKKGKISWLGPSGITSNLSVGEVKSRVRKAFDDIPYAVGLNNHM 106 (245)
T ss_dssp SSCEEEEECSSSTTHHHHHHHHHHTTCEEEEEEEECCC--------CCCBCTTCCHHHHHHHHHHHHHHSTTCCEEEEEE
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHCCCcEEEeccc
Confidence 6889999777779999999999999999999999987621 1222233344555555433222223333
Q ss_pred ccCCCCChHHHHHHHHHHH
Q 021762 257 IRSWYQREGYVNSMADLIQ 275 (308)
Q Consensus 257 I~~~~~~p~YI~a~a~~I~ 275 (308)
=..|-.++.-.+.+.+.++
T Consensus 107 GS~~T~~~~~m~~vm~~l~ 125 (245)
T 2nly_A 107 GSKIVENEKIMRAILEVVK 125 (245)
T ss_dssp CTTGGGCHHHHHHHHHHHH
T ss_pred ccchhcCHHHHHHHHHHHH
Confidence 3446667766655554443
No 58
>1pzx_A Hypothetical protein APC36103; structural genomics, two domains containing mixed alpha/beta structures, PSI; HET: PLM; 2.00A {Geobacillus stearothermophilus} SCOP: c.119.1.1
Probab=35.89 E-value=1.9e+02 Score=26.11 Aligned_cols=98 Identities=9% Similarity=0.102 Sum_probs=57.0
Q ss_pred CCCCHHHHHH---HHHHcCCCEEEEeecCccccccchhhHHHHHHHHHHHhccCCCCCeEEccCCCCChHHHHHHHHH--
Q 021762 199 WYPFTEEAVQ---QIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADL-- 273 (308)
Q Consensus 199 ~~P~I~eal~---~L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~e~~~~~~i~v~~I~~~~~~p~YI~a~a~~-- 273 (308)
++|++.+..+ ++.++| ++|+++++.-..|.| -.+...+.+.+.+. .++.++.+|++-...-+.--...+.
T Consensus 63 Sqps~~~~~~~f~~l~~~g-~~ii~i~iSs~LSGT--y~sA~~aa~~~~ee--~~~~~I~ViDS~~~s~g~g~~v~~A~~ 137 (289)
T 1pzx_A 63 AQPSPLAMKELFLPYAKEN-RPCLYIAFSSKLSGT--YQTAMAVRSELLDE--YPEFRLTIIDSKCASLGQGLAVMKAVE 137 (289)
T ss_dssp ECCCHHHHHHHHHHHHHTT-CCEEEEECCTTTCSH--HHHHHHHHHHHHHH--STTCCEEEEECCCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCC-CeEEEEECCCchhHH--HHHHHHHHHhhHhh--CCCCeEEEEcCchhhHHHHHHHHHHHH
Confidence 6888876555 555778 799999998876643 22222333333321 2335799999987665533221111
Q ss_pred ----------HHHHHhhcCCCCceEEEEEeCCCCchhhhhcC
Q 021762 274 ----------IQKELGKFQKPEEVSFIVVAYTFCMVPLQKFG 305 (308)
Q Consensus 274 ----------I~e~l~~~~~~~~~~LLFSaHglP~r~v~~~~ 305 (308)
|.+.+++. .++..++|.... +.+++|+|
T Consensus 138 l~~~G~s~eeI~~~l~~~--~~~~~~~f~v~~--L~~L~kGG 175 (289)
T 1pzx_A 138 LAKQNTPYNLLCETIESY--CRHMEHIFTVDN--LDYLARGG 175 (289)
T ss_dssp HHHTTCCHHHHHHHHHHH--HHTEEEEEECSC--HHHHHHHT
T ss_pred HHHcCCCHHHHHHHHHHH--HhcCEEEEEeCC--HHHHHHCC
Confidence 11111111 135678898888 68888877
No 59
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=35.67 E-value=20 Score=34.00 Aligned_cols=18 Identities=11% Similarity=0.010 Sum_probs=13.9
Q ss_pred CceEEEEEeCCCCchhhh
Q 021762 285 EEVSFIVVAYTFCMVPLQ 302 (308)
Q Consensus 285 ~~~~LLFSaHglP~r~v~ 302 (308)
++..+||+|||+|....+
T Consensus 77 ~g~~VIirAHGv~~~v~~ 94 (328)
T 3szu_A 77 DGAILIFSAHGVSQAVRN 94 (328)
T ss_dssp TTCEEEECTTCCCHHHHH
T ss_pred CCCEEEEECCCCCHHHHH
Confidence 345799999999976544
No 60
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=35.14 E-value=63 Score=29.34 Aligned_cols=48 Identities=10% Similarity=0.076 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhcCCCceeEEeeecCCC--------CHHHHHHHHHHcCCCEEEEe
Q 021762 174 EQAQALKTALEAKNLPVNVYVGMRYWYP--------FTEEAVQQIKRDRITRLVVL 221 (308)
Q Consensus 174 ~Qa~aL~~~L~~~g~~~~V~~AMrY~~P--------~I~eal~~L~~~GidrIVvL 221 (308)
+++..+-+...+.|..++.++++-|+.| ++.+.++++.+.|+|.|.+-
T Consensus 124 ~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~ 179 (302)
T 2ftp_A 124 ERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLG 179 (302)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 3444444455567888888899888866 34455666668999965443
No 61
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=34.25 E-value=1.9e+02 Score=25.97 Aligned_cols=63 Identities=16% Similarity=0.285 Sum_probs=38.3
Q ss_pred HHHHHHhcCCCceeEEeeecCCCCHHHHHHHHH---HcCCCEEEEeecCccccc-cchhhHHHHHHHHHHH
Q 021762 179 LKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIK---RDRITRLVVLPLYPQFSI-STTGSSIRVLQNIFRE 245 (308)
Q Consensus 179 L~~~L~~~g~~~~V~~AMrY~~P~I~eal~~L~---~~GidrIVvLPLyPqyS~-sTtgS~~~~l~ea~~e 245 (308)
++...+..+..++|..|- +..+++|+++..+ +.|+|-++++| |.|.. .|-....+.+.+..+.
T Consensus 62 ~~~~~~~~~gr~pviaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~~s~~~l~~~f~~va~a 128 (294)
T 3b4u_A 62 LSSFIAAGIAPSRIVTGV--LVDSIEDAADQSAEALNAGARNILLAP--PSYFKNVSDDGLFAWFSAVFSK 128 (294)
T ss_dssp HHHHHHTTCCGGGEEEEE--CCSSHHHHHHHHHHHHHTTCSEEEECC--CCSSCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCcEEEeC--CCccHHHHHHHHHHHHhcCCCEEEEcC--CcCCCCCCHHHHHHHHHHHHHh
Confidence 333333333456676663 5678899987544 56999888886 56665 5555555555554443
No 62
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=33.90 E-value=1.4e+02 Score=26.85 Aligned_cols=51 Identities=12% Similarity=0.001 Sum_probs=37.6
Q ss_pred eeecCCCCHHHHHHHHHHcCCCEEEEeecCccccccchhhHHHHHHHHHHHh
Q 021762 195 GMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFRED 246 (308)
Q Consensus 195 AMrY~~P~I~eal~~L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~e~ 246 (308)
+...++|..++++++....|+|+++++- -|.|....+..+-..+.+++++.
T Consensus 61 av~~G~~~~~~~lr~ala~GaD~vi~v~-d~~~~~~~~~~~a~~La~~i~~~ 111 (264)
T 1o97_C 61 VVSVGPDRVDESLRKCLAKGADRAVRVW-DDAAEGSDAIVVGRILTEVIKKE 111 (264)
T ss_dssp EEEESCGGGHHHHHHHHHTTCSEEEEEC-CGGGTTCCHHHHHHHHHHHHHHH
T ss_pred EEEeCchhHHHHHHHHHhcCCCEEEEEc-CcccccCCHHHHHHHHHHHHHhc
Confidence 4555777789999999889999999997 56665555555556666666654
No 63
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=33.33 E-value=56 Score=30.00 Aligned_cols=47 Identities=13% Similarity=0.176 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHhcCCCceeEEeeecCCC--------CHHHHHHHHHHcCCCEEEE
Q 021762 174 EQAQALKTALEAKNLPVNVYVGMRYWYP--------FTEEAVQQIKRDRITRLVV 220 (308)
Q Consensus 174 ~Qa~aL~~~L~~~g~~~~V~~AMrY~~P--------~I~eal~~L~~~GidrIVv 220 (308)
+++...-+...+.|.++.+++.|.|+.| ++.+.++++.+.|+++|.+
T Consensus 122 ~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l 176 (307)
T 1ydo_A 122 HILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSL 176 (307)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 3444444555667878888888888766 4556677788899996544
No 64
>3lup_A DEGV family protein; PSI-2, MCSG, structural genomics, fatty acid binding, protei structure initiative; HET: ELA; 2.65A {Streptococcus agalactiae} SCOP: c.119.1.0
Probab=31.57 E-value=87 Score=28.38 Aligned_cols=95 Identities=18% Similarity=0.142 Sum_probs=55.9
Q ss_pred CCCCHHHHHH---HHHHcCCCEEEEeecCccccccchhhHHHHHHHHHHHhccCCCCCeEEccCCCCChHHHHHHHH--H
Q 021762 199 WYPFTEEAVQ---QIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMAD--L 273 (308)
Q Consensus 199 ~~P~I~eal~---~L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~e~~~~~~i~v~~I~~~~~~p~YI~a~a~--~ 273 (308)
++|++.+..+ ++.++|.|+|+++++.-..|.|- .+ ...+ .++ .++.++.+|++-...-+.--...+ .
T Consensus 65 Sqps~~~~~~~f~~l~~~g~d~ii~i~iSs~LSGTy-~s-A~~a---~~~---~~~~~I~ViDS~~~s~g~g~~v~~A~~ 136 (285)
T 3lup_A 65 SQPSLAELDDLLCQLEKEGYTHVLGLFIAAGISGFW-QN-IQFL---IEE---HPNLTIAFPDTKITSAPQGNLVRNALM 136 (285)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCEEEECCSCGGGCTHH-HH-HTTH---HHH---CTTSEEECCCCCCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEEeCCCchhHHH-HH-HHHH---HHh---CCCCCEEEEcCCchHHHHHHHHHHHHH
Confidence 6888775555 66678999999999877765431 11 1111 122 234579999998776553221111 1
Q ss_pred ----------HHHHHhhcCCCCceEEEEEeCCCCchhhhhcC
Q 021762 274 ----------IQKELGKFQKPEEVSFIVVAYTFCMVPLQKFG 305 (308)
Q Consensus 274 ----------I~e~l~~~~~~~~~~LLFSaHglP~r~v~~~~ 305 (308)
|.+.+++. .++..++|.... +.+++|+|
T Consensus 137 l~~~G~s~eeI~~~l~~~--~~~~~~~f~v~~--L~~L~kGG 174 (285)
T 3lup_A 137 CSREGMDFDVIVNKIQSQ--IEKIEGFIVVND--LNHLVKGG 174 (285)
T ss_dssp HHTTTCCHHHHHHHHHHH--HTTCEEEEECSC--THHHHHHT
T ss_pred HHHcCCCHHHHHHHHHHH--HhhcEEEEEECC--hHHHhhCC
Confidence 11112111 135678898888 67888777
No 65
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=31.57 E-value=2e+02 Score=24.12 Aligned_cols=51 Identities=10% Similarity=0.008 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCceeEEeeecCCCC-HHHHHHHHHHcCCCEEEEee
Q 021762 170 KITDEQAQALKTALEAKNLPVNVYVGMRYWYPF-TEEAVQQIKRDRITRLVVLP 222 (308)
Q Consensus 170 ~iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~-I~eal~~L~~~GidrIVvLP 222 (308)
.+..+..+.+++.+.+.|.++ .+......+. ..+.++.+...++|-||+.|
T Consensus 21 ~~~~~~~~gi~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~l~~~~~dgiIi~~ 72 (277)
T 3e61_A 21 PFFTLIARGVEDVALAHGYQV--LIGNSDNDIKKAQGYLATFVSHNCTGMISTA 72 (277)
T ss_dssp HHHHHHHHHHHHHHHHTTCCE--EEEECTTCHHHHHHHHHHHHHTTCSEEEECG
T ss_pred HHHHHHHHHHHHHHHHCCCEE--EEEeCCCCHHHHHHHHHHHHhCCCCEEEEec
Confidence 345566677777777665433 3333222222 22556677777888888766
No 66
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=31.07 E-value=1.3e+02 Score=26.10 Aligned_cols=41 Identities=17% Similarity=0.305 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHhcCCCceeEEeeecCCCCHHHHHHHHHHcCCC
Q 021762 173 DEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRIT 216 (308)
Q Consensus 173 ~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~eal~~L~~~Gid 216 (308)
+.|.+.++..+. .+.+.-+. +-.....+.+.++++.+.|+-
T Consensus 45 ~~~~~~i~~l~~-~~vdgiIi--~~~~~~~~~~~~~~~~~~~iP 85 (313)
T 3m9w_A 45 ETQMSQIENMIN-RGVDVLVI--IPYNGQVLSNVVKEAKQEGIK 85 (313)
T ss_dssp HHHHHHHHHHHH-TTCSEEEE--ECSSTTSCHHHHHHHHTTTCE
T ss_pred HHHHHHHHHHHH-cCCCEEEE--eCCChhhhHHHHHHHHHCCCe
Confidence 345555554443 33333232 223344456778888777775
No 67
>2q7s_A N-formylglutamate amidohydrolase; YP_297560.1, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE; 2.00A {Ralstonia eutropha} SCOP: c.56.5.9
Probab=30.76 E-value=28 Score=32.04 Aligned_cols=32 Identities=6% Similarity=0.142 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCceEEEEEeCCCCchh
Q 021762 265 GYVNSMADLIQKELGKFQKPEEVSFIVVAYTFCMVP 300 (308)
Q Consensus 265 ~YI~a~a~~I~e~l~~~~~~~~~~LLFSaHglP~r~ 300 (308)
-|.+++++.|.+..+.++. .+|++.||+|-..
T Consensus 147 PYH~aL~~~l~~~~a~~g~----~vlid~HS~~~~~ 178 (290)
T 2q7s_A 147 PYHAALTEAVEGAYQRFGA----VWHLNLHSMPNNA 178 (290)
T ss_dssp HHHHHHHHHHHHHHHHHSC----EEEEEEEEECTTH
T ss_pred HHHHHHHHHHHHHHHhCCC----EEEEEecCCCCcc
Confidence 3999999999998888753 7999999998864
No 68
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=30.59 E-value=1.6e+02 Score=23.13 Aligned_cols=52 Identities=10% Similarity=0.015 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHhcCCCceeEEeeecCCCCHHHHHHHHHHcCCCEEEEeecC
Q 021762 171 ITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLY 224 (308)
Q Consensus 171 iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~eal~~L~~~GidrIVvLPLy 224 (308)
..++..+.+.+.+.+.|.++++..-...+.| .++.++...+.++| +||+--.
T Consensus 75 ~~~~~l~~~~~~~~~~g~~~~~~~~v~~G~~-~~~I~~~a~~~~~D-LIV~G~~ 126 (155)
T 3dlo_A 75 EAKETLSWAVSIIRKEGAEGEEHLLVRGKEP-PDDIVDFADEVDAI-AIVIGIR 126 (155)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEESSSCH-HHHHHHHHHHTTCS-EEEEECC
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEecCCCH-HHHHHHHHHHcCCC-EEEECCC
Confidence 3444455555666667777776665666766 35555555566887 4555433
No 69
>1h2e_A Phosphatase, YHFR; hydrolase, broad specificity phosphatase, DPGM homolog; 1.69A {Bacillus stearothermophilus} SCOP: c.60.1.1 PDB: 1h2f_A* 1ebb_A
Probab=30.42 E-value=1.4e+02 Score=24.98 Aligned_cols=51 Identities=22% Similarity=0.190 Sum_probs=34.2
Q ss_pred CCchhHHHHHHHHHHHHHHHhcCCCceeEEeeecCCCCHH--HHHHHHHHc-CCCEEEEee
Q 021762 165 GSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTE--EAVQQIKRD-RITRLVVLP 222 (308)
Q Consensus 165 gSPL~~iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~--eal~~L~~~-GidrIVvLP 222 (308)
.+||.+.-++||+++.+.|... .+ ..-|..|... ++.+.+.+. |+ .+.+.|
T Consensus 25 D~pLt~~G~~qA~~~~~~l~~~--~~----~~i~sSpl~Ra~qTA~~i~~~~~~-~~~~~~ 78 (207)
T 1h2e_A 25 DSPLTEKGRQDAMRLGKRLEAV--EL----AAIYTSTSGRALETAEIVRGGRLI-PIYQDE 78 (207)
T ss_dssp CCCBCHHHHHHHHHHHHHTTTS--CC----SEEEECSSHHHHHHHHHHHTTCSC-CEEECG
T ss_pred CCCCCHHHHHHHHHHHHHHcCC--CC----CEEEECccHHHHHHHHHHHhcCCC-CeEECc
Confidence 5899999999999999999642 12 2345788866 666666543 43 244444
No 70
>3h5l_A Putative branched-chain amino acid ABC transporter; structural genomics, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi}
Probab=30.40 E-value=2.8e+02 Score=25.00 Aligned_cols=53 Identities=11% Similarity=0.072 Sum_probs=39.5
Q ss_pred hHHHHHHHHHHHHHHHhcCCCceeEEeeecCCCCHHHHHHHHHHcCCCEEEEe
Q 021762 169 RKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVL 221 (308)
Q Consensus 169 ~~iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~eal~~L~~~GidrIVvL 221 (308)
..+.+..++.+++.+.+.|..+.....+..+.......+.++++.+.|-|++.
T Consensus 174 ~~~g~~~~~~~~~~~~~~g~~vv~~~~~~~~~~d~~~~l~~i~~~~~d~v~~~ 226 (419)
T 3h5l_A 174 GIYSVNIANAIRDGAGEYGYDVSLFETVAIPVSDWGPTLAKLRADPPAVIVVT 226 (419)
T ss_dssp SHHHHHHHHHHHHHGGGGTCEEEEEEECCSSCSCCHHHHHHHHHSCCSEEEEC
T ss_pred cchhHHHHHHHHHHHHHcCCeEEEEecCCCCCccHHHHHHHHHhcCCCEEEEc
Confidence 46778889999999988776554444445566788899999999999854443
No 71
>3vow_A Probable DNA DC->DU-editing enzyme apobec-3C; antiviral deffense, HOST-virus interaction, metal- HIV-1 VIF, BET, single domain, sivagm, hydrolase; 2.15A {Homo sapiens} PDB: 3vm8_A
Probab=30.17 E-value=24 Score=30.94 Aligned_cols=102 Identities=16% Similarity=0.295 Sum_probs=59.5
Q ss_pred HhhcccC--CCCchhHHHHHHHHHHHHHHHhcCCCceeEEe--eecCCCCHHHHHHHHHHcCCCEEEEeecCccccccch
Q 021762 157 EGYAAIG--GGSPLRKITDEQAQALKTALEAKNLPVNVYVG--MRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTT 232 (308)
Q Consensus 157 ~~Y~~IG--ggSPL~~iT~~Qa~aL~~~L~~~g~~~~V~~A--MrY~~P~I~eal~~L~~~GidrIVvLPLyPqyS~sTt 232 (308)
..|+-.. .-||=..-.++.|+-|++ ..++.+.+++| +-||.|...++|+.|.++|+. |-|--|+-
T Consensus 84 ~~y~VTwy~SwSPC~~CA~~va~FL~~---~~~v~L~If~aRLY~~~~~~~q~gLr~L~~~G~~--v~iM~~~e------ 152 (190)
T 3vow_A 84 TKYQVTWYTSWSPCPDCAGEVAEFLAR---HSNVNLTIFTARLYYFQYPCYQEGLRSLSQEGVA--VEIMDYED------ 152 (190)
T ss_dssp SEEEEEEEEEECCCHHHHHHHHHHHHH---CTTEEEEEEEEECTTTTSHHHHHHHHHHHHHTCE--EEECCHHH------
T ss_pred ceEEEEEEEeCCchHHHHHHHHHHHHh---CCCeEEEEEEEecccccCchHHHHHHHHHHCCCc--EEEeChHH------
Confidence 3565543 458988765555555432 23456788888 455789999999999999985 33322322
Q ss_pred hhHHHHHHHHHHHhccCCCCCeEEccCCCCChHHHHHHHHHHHHHH
Q 021762 233 GSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKEL 278 (308)
Q Consensus 233 gS~~~~l~ea~~e~~~~~~i~v~~I~~~~~~p~YI~a~a~~I~e~l 278 (308)
....++..... .+.+ -.+|-+=...-+++...+++-|
T Consensus 153 --F~~CW~~FVd~----~~~~---F~PW~~L~~n~~~l~~~L~~IL 189 (190)
T 3vow_A 153 --FKYCWENFVYN----DNEP---FKPWKGLKTNFRLLKRRLRESL 189 (190)
T ss_dssp --HHHHHHHHBCC----TTCC---CCCCTTHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHhccC----CCCC---CCcchhHhHHHHHHHHHHHHHh
Confidence 22223222211 1112 3367776666667666666554
No 72
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=29.74 E-value=2.9e+02 Score=24.37 Aligned_cols=50 Identities=4% Similarity=-0.055 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHhcCCCceeEEeeecCCCCHHHHHHHHHHcCCCEEEEee
Q 021762 171 ITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLP 222 (308)
Q Consensus 171 iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~eal~~L~~~GidrIVvLP 222 (308)
+.....+.+++.+.+.| +.+.+.-....+..++.+++|.+.|+|-||+.+
T Consensus 21 f~~~~~~Gi~~~~~~~g--~~~~~~~~~~~~~~~~~l~~l~~~~~dgIi~~~ 70 (318)
T 2fqx_A 21 FNQQVWEGISRFAQENN--AKCKYVTASTDAEYVPSLSAFADENMGLVVACG 70 (318)
T ss_dssp HHHHHHHHHHHHHHHTT--CEEEEEECCSGGGHHHHHHHHHHTTCSEEEEES
T ss_pred HHHHHHHHHHHHHHHhC--CeEEEEeCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 55666777777777765 444443333445566789999999999888765
No 73
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=29.58 E-value=1.8e+02 Score=27.51 Aligned_cols=50 Identities=14% Similarity=0.111 Sum_probs=31.2
Q ss_pred CCCceeEEeeecCCCCHHHHHHHHH---HcCCCEEEEeecCccccccchhhHHHHHH
Q 021762 187 NLPVNVYVGMRYWYPFTEEAVQQIK---RDRITRLVVLPLYPQFSISTTGSSIRVLQ 240 (308)
Q Consensus 187 g~~~~V~~AMrY~~P~I~eal~~L~---~~GidrIVvLPLyPqyS~sTtgS~~~~l~ 240 (308)
+..++|..|- +...++|+++..+ +.|+|-++++| |.|...|-....+.+.
T Consensus 126 ~grvpViaGv--g~~st~eai~la~~A~~~Gadavlvv~--PyY~k~sq~gl~~hf~ 178 (360)
T 4dpp_A 126 GGSIKVIGNT--GSNSTREAIHATEQGFAVGMHAALHIN--PYYGKTSIEGLIAHFQ 178 (360)
T ss_dssp TTTSEEEEEC--CCSSHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHH
T ss_pred CCCCeEEEec--CCCCHHHHHHHHHHHHHcCCCEEEEcC--CCCCCCCHHHHHHHHH
Confidence 3456666653 6778898887544 46999888876 5565555444334333
No 74
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=29.10 E-value=2.2e+02 Score=24.00 Aligned_cols=54 Identities=11% Similarity=0.147 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCceeEEeeecCCCC-HHHHHHHHHHcCCCEEEEeecCc
Q 021762 170 KITDEQAQALKTALEAKNLPVNVYVGMRYWYPF-TEEAVQQIKRDRITRLVVLPLYP 225 (308)
Q Consensus 170 ~iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~-I~eal~~L~~~GidrIVvLPLyP 225 (308)
.+.....+.+++.+.+.|.++ .+....+.+. ..+.++.+.+.++|-||+.|..+
T Consensus 21 ~~~~~~~~gi~~~a~~~g~~~--~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~ 75 (293)
T 3l6u_A 21 EFAQRLINAFKAEAKANKYEA--LVATSQNSRISEREQILEFVHLKVDAIFITTLDD 75 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCEE--EEEECSSCHHHHHHHHHHHHHTTCSEEEEECSCT
T ss_pred HHHHHHHHHHHHHHHHcCCEE--EEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCh
Confidence 355667788888888776444 4333333332 23678888889999999987543
No 75
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=28.00 E-value=2.8e+02 Score=23.62 Aligned_cols=52 Identities=12% Similarity=0.006 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHhcCCCceeEEeeecCCCCHHHHHHHHHHcCCCEEEEeecC
Q 021762 171 ITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLY 224 (308)
Q Consensus 171 iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~eal~~L~~~GidrIVvLPLy 224 (308)
+..+..+.+++.+.+.|..+ .+......-...+.++.+...++|-||++|..
T Consensus 24 ~~~~~~~gi~~~a~~~g~~~--~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~ 75 (294)
T 3qk7_A 24 TFLEMISWIGIELGKRGLDL--LLIPDEPGEKYQSLIHLVETRRVDALIVAHTQ 75 (294)
T ss_dssp HHHHHHHHHHHHHHHTTCEE--EEEEECTTCCCHHHHHHHHHTCCSEEEECSCC
T ss_pred hHHHHHHHHHHHHHHCCCEE--EEEeCCChhhHHHHHHHHHcCCCCEEEEeCCC
Confidence 33444555555555554333 22222222223344555555666666665543
No 76
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=27.99 E-value=62 Score=28.57 Aligned_cols=101 Identities=9% Similarity=0.131 Sum_probs=61.1
Q ss_pred HhhcccC--CCCchhHHHHHHHHHHHHHHHh-cCCCceeEEe-eecCCCCHHHHHHHHHHcCCCEEEEeecCccccccch
Q 021762 157 EGYAAIG--GGSPLRKITDEQAQALKTALEA-KNLPVNVYVG-MRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTT 232 (308)
Q Consensus 157 ~~Y~~IG--ggSPL~~iT~~Qa~aL~~~L~~-~g~~~~V~~A-MrY~~P~I~eal~~L~~~GidrIVvLPLyPqyS~sTt 232 (308)
..|+-.. .-||=.+=.++. .+.|.+ .++...+++| ..|+.|...++|+.|.+.|+. |-+--|+-
T Consensus 98 ~~Y~vTwy~SWSPC~~CA~~v----~~FL~~~~~v~L~If~aRLY~~~~~~~~gLr~L~~aG~~--v~iM~~~e------ 165 (203)
T 3v4k_A 98 QDYRVTCFTSWSPCFSCAQEM----AKFISKNKHVSLCIKTARIYDDQGRCQEGLRTLAEAGAK--ISIMTYSE------ 165 (203)
T ss_pred CeEEEEEEEeCCChHHHHHHH----HHHHhhCCCeEEEEEEEeecccCchHHHHHHHHHHCCCe--EEecCHHH------
Confidence 5677764 568988755544 445543 4567888888 444589999999999999985 32222222
Q ss_pred hhHHHHHHHHHHHhccCCCCCeEEccCCCCChHHHHHHHHHHHHHH
Q 021762 233 GSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKEL 278 (308)
Q Consensus 233 gS~~~~l~ea~~e~~~~~~i~v~~I~~~~~~p~YI~a~a~~I~e~l 278 (308)
....++......+ . --.+|.+=+...+.+...+++-|
T Consensus 166 --f~~CW~~FV~nqg----~---pF~PW~~L~en~~~l~~~L~~IL 202 (203)
T 3v4k_A 166 --FKHCWDTFVDHQG----A---PFQPWDGLDEHSQDLSGRLRAIL 202 (203)
T ss_pred --HHHHHHHHccCCC----C---CCCchhHHHHHHHHHHHHHHHHh
Confidence 2223333222211 1 22357777777777777766544
No 77
>3dnf_A ISPH, LYTB, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; trilobal strucure, open alpha/beta, iron, iron-sulfur, isopr biosynthesis; 1.65A {Aquifex aeolicus}
Probab=27.95 E-value=31 Score=32.15 Aligned_cols=50 Identities=12% Similarity=-0.070 Sum_probs=25.9
Q ss_pred CeEEccCCCCChHHHHHHHHHHHHHHhhcCCCCceEEEEEeCCCCchhhh
Q 021762 253 PVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVSFIVVAYTFCMVPLQ 302 (308)
Q Consensus 253 ~v~~I~~~~~~p~YI~a~a~~I~e~l~~~~~~~~~~LLFSaHglP~r~v~ 302 (308)
++-+.-+-=-+|.-++.+.+.=-..++...-|++..+||+|||+|....+
T Consensus 33 ~iy~~g~IVHN~~Vv~~L~~~Gv~~v~~~ev~~g~~VIirAHGv~~~v~~ 82 (297)
T 3dnf_A 33 KVYTLGPIIHNPQEVNRLKNLGVFPSQGEEFKEGDTVIIRSHGIPPEKEE 82 (297)
T ss_dssp CEEESSCSSSCHHHHHHHHHHTEEECCSSCCCTTCEEEECTTCCCHHHHH
T ss_pred CEEEeCCcccCHHHHHHHHhCCCEEechhhCCCCCEEEEECCCCCHHHHH
Confidence 45555555555555544432211111111113455799999999976544
No 78
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=27.41 E-value=94 Score=28.04 Aligned_cols=47 Identities=17% Similarity=0.159 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhcCCCceeEEeeecCCC--------CHHHHHHHHHHcCCCEEEEe
Q 021762 175 QAQALKTALEAKNLPVNVYVGMRYWYP--------FTEEAVQQIKRDRITRLVVL 221 (308)
Q Consensus 175 Qa~aL~~~L~~~g~~~~V~~AMrY~~P--------~I~eal~~L~~~GidrIVvL 221 (308)
.+...-+...+.|.++.+++.|.|+.| ++.+.++++.+.|++.|.+-
T Consensus 122 ~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~ 176 (298)
T 2cw6_A 122 RFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLG 176 (298)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEec
Confidence 333344455566777887777766554 45567778888999865544
No 79
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=26.93 E-value=1.6e+02 Score=25.17 Aligned_cols=52 Identities=13% Similarity=0.070 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHhcCCCceeEE-eeecCCCC-HHHHHHHHHHcCCCEEEEeecC
Q 021762 171 ITDEQAQALKTALEAKNLPVNVYV-GMRYWYPF-TEEAVQQIKRDRITRLVVLPLY 224 (308)
Q Consensus 171 iT~~Qa~aL~~~L~~~g~~~~V~~-AMrY~~P~-I~eal~~L~~~GidrIVvLPLy 224 (308)
+..+..+.+++.+.+.| +.+.+ ......+. ..+.++.+...++|-||+.|..
T Consensus 18 ~~~~~~~gi~~~a~~~g--~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~ 71 (305)
T 3g1w_A 18 YWKRCLKGFEDAAQALN--VTVEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAID 71 (305)
T ss_dssp HHHHHHHHHHHHHHHHT--CEEEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCSS
T ss_pred HHHHHHHHHHHHHHHcC--CEEEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCCC
Confidence 33455566666666654 33333 22222222 2255667777788888877654
No 80
>3f3k_A Uncharacterized protein YKR043C; structural genomics,, PSI-2, prote structure initiative; 1.75A {Saccharomyces cerevisiae} PDB: 3lg2_A 3oi7_A* 3ll4_A*
Probab=26.79 E-value=95 Score=27.05 Aligned_cols=137 Identities=12% Similarity=0.070 Sum_probs=66.8
Q ss_pred CCchhHHHHHHHHHHHHHHHhcCCC-ceeEEeeecCCCCHH--HHHHHHHHc-C-----CCEEEEeecCccccc-cchhh
Q 021762 165 GSPLRKITDEQAQALKTALEAKNLP-VNVYVGMRYWYPFTE--EAVQQIKRD-R-----ITRLVVLPLYPQFSI-STTGS 234 (308)
Q Consensus 165 gSPL~~iT~~Qa~aL~~~L~~~g~~-~~V~~AMrY~~P~I~--eal~~L~~~-G-----idrIVvLPLyPqyS~-sTtgS 234 (308)
.+||...-++||+++.+.|...+.. ....+..-|..|... ++.+.+.+. + --.+.+.+..=-... .-.|.
T Consensus 29 D~pLT~~G~~QA~~l~~~L~~~~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~~L~E~~~G~~eg~ 108 (265)
T 3f3k_A 29 DLPLTPYGEGQMLRTGESVFRNNQFLNPDNITYIFTSPRLRARQTVDLVLKPLSDEQRAKIRVVVDDDLREWEYGDYEGM 108 (265)
T ss_dssp CCCCCHHHHHHHHHHHHHHHTC-CCSCGGGEEEEEECSSHHHHHHHHHHTTTSCHHHHHTSEEEECGGGSCCCCGGGTTC
T ss_pred CCCCCHHHHHHHHHHHHHHHhcccccCCCCCCEEEECCHHHHHHHHHHHHHhccccccCCCCeEEcCCceeeccCccCCC
Confidence 5799999999999999999754310 012334456788876 555555332 1 024555554322211 11233
Q ss_pred HHHHHHHHHHHhccCCCCCe-EEccCCCCChHHHHHHHHHHHHHHhhcC--------CCCceEEEEEeCCCCchhhh
Q 021762 235 SIRVLQNIFREDAYLSRLPV-SIIRSWYQREGYVNSMADLIQKELGKFQ--------KPEEVSFIVVAYTFCMVPLQ 302 (308)
Q Consensus 235 ~~~~l~ea~~e~~~~~~i~v-~~I~~~~~~p~YI~a~a~~I~e~l~~~~--------~~~~~~LLFSaHglP~r~v~ 302 (308)
..+.+.+.+.+........+ .+...+..-+.+.+ +.+++.+++++.. ..++..+++..||-.++.+-
T Consensus 109 ~~~ei~~~~~~~~~~~~~~~~~w~~~~p~gEs~~~-~~~R~~~~l~~l~~~~~~~~~~~~~~~vliVsHg~~ir~l~ 184 (265)
T 3f3k_A 109 LTREIIELRKSRGLDKERPWNIWRDGCENGETTQQ-IGLRLSRAIARIQNLHRKHQSEGRASDIMVFAHGHALRYFA 184 (265)
T ss_dssp CHHHHHHHHHHTTCCSSSCCCHHHHCCTTSCCHHH-HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECHHHHHHHH
T ss_pred cHHHHHHHhhhccccccchhhhhccCCCCCCCHHH-HHHHHHHHHHHHHHHhhhhhccCCCCcEEEEeChHHHHHHH
Confidence 34555555443221100000 01111122333433 3445555554321 01123577788998887654
No 81
>2odf_A AGR_C_3887P, hypothetical protein ATU2144; structural genomics, unknown FUNC PSI-2, MCSG, protein structure initiative; 1.90A {Agrobacterium tumefaciens str} SCOP: c.56.5.9
Probab=26.53 E-value=37 Score=30.63 Aligned_cols=30 Identities=13% Similarity=0.260 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCceEEEEEeCCCCc
Q 021762 265 GYVNSMADLIQKELGKFQKPEEVSFIVVAYTFCM 298 (308)
Q Consensus 265 ~YI~a~a~~I~e~l~~~~~~~~~~LLFSaHglP~ 298 (308)
-|.+++++.|.+..+.++. .+|++.||.|-
T Consensus 129 PYH~al~~~l~~~~a~~g~----~vlid~HS~~p 158 (257)
T 2odf_A 129 PFHDRVSEIIAERQAAGRK----VVVVTIHSFTP 158 (257)
T ss_dssp HHHHHHHHHHHHHHHTTCC----CEEEEEEEECS
T ss_pred HHHHHHHHHHHHHHHhCCC----EEEEEecCCCc
Confidence 4999999999998887753 68999999874
No 82
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=26.13 E-value=1.9e+02 Score=25.52 Aligned_cols=51 Identities=12% Similarity=0.178 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCceeEEeeecCCCCHHHHHHHHHHcCCCEEEE
Q 021762 170 KITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVV 220 (308)
Q Consensus 170 ~iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~eal~~L~~~GidrIVv 220 (308)
.+.+..++.+++.|.+.|.++.....+..........++++++.+.|-|++
T Consensus 152 ~~g~~~~~~~~~~~~~~G~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~v~~ 202 (364)
T 3lop_A 152 ALGKEAITGVERTLKAHALAITAMASYPRNTANVGPAVDKLLAADVQAIFL 202 (364)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCSEEEEECTTSCCCHHHHHHHHHSCCSEEEE
T ss_pred hhhHHHHHHHHHHHHHcCCcEEEEEEecCCCccHHHHHHHHHhCCCCEEEE
Confidence 567788899999999888766555555666778899999999999985444
No 83
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=26.11 E-value=3.7e+02 Score=24.38 Aligned_cols=62 Identities=11% Similarity=0.078 Sum_probs=36.3
Q ss_pred HHHHHHhcCCCceeEEeeecCCCCHHHHHHHHH---HcCC-CEEEEeecCccccccchhhHHHHHHHHHH
Q 021762 179 LKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIK---RDRI-TRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (308)
Q Consensus 179 L~~~L~~~g~~~~V~~AMrY~~P~I~eal~~L~---~~Gi-drIVvLPLyPqyS~sTtgS~~~~l~ea~~ 244 (308)
++...+..+..++|..| -+...++|+++..+ +.|. |-++++| |.|...|-....+.+.+..+
T Consensus 66 ~~~~~~~~~grvpViaG--vg~~~t~~ai~la~~A~~~Ga~davlv~~--P~y~~~s~~~l~~~f~~va~ 131 (311)
T 3h5d_A 66 FAAVQKVVNGRVPLIAG--VGTNDTRDSIEFVKEVAEFGGFAAGLAIV--PYYNKPSQEGMYQHFKAIAD 131 (311)
T ss_dssp HHHHHHHSCSSSCEEEE--CCCSSHHHHHHHHHHHHHSCCCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCcEEEe--CCCcCHHHHHHHHHHHHhcCCCcEEEEcC--CCCCCCCHHHHHHHHHHHHH
Confidence 33334443446677766 36778899888443 4475 9888876 55555554444444444433
No 84
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=25.96 E-value=3.8e+02 Score=24.41 Aligned_cols=58 Identities=16% Similarity=0.163 Sum_probs=33.6
Q ss_pred HHhcCCCceeEEeeecCCCCHHHHHHHHH---HcCCCEEEEeecCccccc--cchhhHHHHHHHHHH
Q 021762 183 LEAKNLPVNVYVGMRYWYPFTEEAVQQIK---RDRITRLVVLPLYPQFSI--STTGSSIRVLQNIFR 244 (308)
Q Consensus 183 L~~~g~~~~V~~AMrY~~P~I~eal~~L~---~~GidrIVvLPLyPqyS~--sTtgS~~~~l~ea~~ 244 (308)
.+..+..++|..| -+...+.|+++..+ +.|+|-++++| |.|-. .|-....+.+.+..+
T Consensus 74 ~~~~~grvpviaG--vg~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~kp~~~~~l~~~f~~ia~ 136 (318)
T 3qfe_A 74 RKAVGPDFPIMAG--VGAHSTRQVLEHINDASVAGANYVLVLP--PAYFGKATTPPVIKSFFDDVSC 136 (318)
T ss_dssp HHHHCTTSCEEEE--CCCSSHHHHHHHHHHHHHHTCSEEEECC--CCC---CCCHHHHHHHHHHHHH
T ss_pred HHHhCCCCcEEEe--CCCCCHHHHHHHHHHHHHcCCCEEEEeC--CcccCCCCCHHHHHHHHHHHHh
Confidence 3333445677665 36788999988444 56999888877 43322 344444444444443
No 85
>3lhk_A Putative DNA binding protein MJ0014; MCSG, PSI-2, structural genomics; 2.20A {Methanocaldococcus jannaschii}
Probab=24.98 E-value=1.7e+02 Score=23.70 Aligned_cols=80 Identities=11% Similarity=0.197 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHhcCCCceeEE----eeecCCCCHHHHHHHHHHcCCCEEEEeecCccccccchhhHHHHHHHHHHHh
Q 021762 171 ITDEQAQALKTALEAKNLPVNVYV----GMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFRED 246 (308)
Q Consensus 171 iT~~Qa~aL~~~L~~~g~~~~V~~----AMrY~~P~I~eal~~L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~e~ 246 (308)
-.+.|.+.|++.-.+.|..+.+|. |...-.|-+...++.++...+|.|||--+ --.+..+ .+.+.+.+.+.
T Consensus 19 sl~~Q~~~l~~~~~~~g~~v~~~~D~~SG~~~~Rp~l~~ll~~~~~g~id~vvv~~l-dRL~R~~----~~~l~~~l~~~ 93 (154)
T 3lhk_A 19 DLERQIQLIKSYAEENGWDIQILKDIGSGLNEKRKNYKKLLKMVMNRKVEKVIIAYP-DRLTRFG----FETLKEFFKSY 93 (154)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEEESCTTCTTCHHHHHHHHHHHTTCEEEEEESSH-HHHCSSC----HHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHCCCEEEEEEeccCCcCCCCHHHHHHHHHHHcCCCCEEEEEeC-CcccccH----HHHHHHHHHHC
Confidence 566788888887766664443332 44556788888888887766776665433 2223332 23344555553
Q ss_pred ccCCCCCeEEccC
Q 021762 247 AYLSRLPVSIIRS 259 (308)
Q Consensus 247 ~~~~~i~v~~I~~ 259 (308)
++.+.++..
T Consensus 94 ----gv~~~~~~~ 102 (154)
T 3lhk_A 94 ----GTEIVIINK 102 (154)
T ss_dssp ----TCEEEESCS
T ss_pred ----CCEEEEEeC
Confidence 367888887
No 86
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=24.88 E-value=3.3e+02 Score=23.41 Aligned_cols=52 Identities=13% Similarity=-0.052 Sum_probs=37.6
Q ss_pred hHHHHHHHHHHHHHHHhcCCCceeEEeeecCCCCHHHHHHHHHHcCCCEEEE
Q 021762 169 RKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVV 220 (308)
Q Consensus 169 ~~iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~eal~~L~~~GidrIVv 220 (308)
..+.+...+.+++.|.+.|..+.....+..........++++++.++|-|++
T Consensus 145 ~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~~~dav~~ 196 (362)
T 3snr_A 145 DSYGDLWFNDLKKQGEAMGLKIVGEERFARPDTSVAGQALKLVAANPDAILV 196 (362)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEECTTCSCCHHHHHHHHHHCCSEEEE
T ss_pred chHHHHHHHHHHHHHHHcCCEEEEEeecCCCCCCHHHHHHHHHhcCCCEEEE
Confidence 3467778888999998887654333445556677888999999888885544
No 87
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=24.66 E-value=2.9e+02 Score=24.92 Aligned_cols=88 Identities=15% Similarity=0.116 Sum_probs=54.3
Q ss_pred CceeEEeeecCCCCHHHHHHHHHHcCCCEEEEeecCccccc--------cchhhHHH----HHHHHHHHhccCCCCCeEE
Q 021762 189 PVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSI--------STTGSSIR----VLQNIFREDAYLSRLPVSI 256 (308)
Q Consensus 189 ~~~V~~AMrY~~P~I~eal~~L~~~GidrIVvLPLyPqyS~--------sTtgS~~~----~l~ea~~e~~~~~~i~v~~ 256 (308)
+++|.+|.-=..|+..+..+..++.|.+-++-+||-|.--. -+++..-+ .++.++......-++.=..
T Consensus 54 P~pvT~Ai~P~~p~~~~~a~~A~~~G~EvllHlPMep~~~p~~~~gp~~L~~~~s~~ei~~~l~~al~~vP~a~GvnNHm 133 (261)
T 2qv5_A 54 PPEVTLGFAASGNSLQRWMQDARREGHEILLQIPLEPFGYPGTNPGPDTLLAGDPAKVNIDRLHRSMAKITNYTGVMNYL 133 (261)
T ss_dssp CTTSEEEEETTCSSHHHHHHHHHHHTCCEEEEEEECCTTTTTSCCCTTCBCTTSCHHHHHHHHHHHHTTCCCCSEEEEEE
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCcCcCcCCCCHHHHHHHHHHHHHHCCCcEEEeccc
Confidence 67889998777899999999999999999999999886411 12222223 3444443322211222223
Q ss_pred ccCCCCChHHHHHHHHHHHH
Q 021762 257 IRSWYQREGYVNSMADLIQK 276 (308)
Q Consensus 257 I~~~~~~p~YI~a~a~~I~e 276 (308)
=..|-.++.-.+.+.+.+++
T Consensus 134 GS~~T~~~~~M~~vm~~L~~ 153 (261)
T 2qv5_A 134 GGRFLAEQSALEPVMRDIGK 153 (261)
T ss_dssp CTTGGGCHHHHHHHHHHHHH
T ss_pred ccchhcCHHHHHHHHHHHHH
Confidence 33456677666665544443
No 88
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=24.36 E-value=2.2e+02 Score=25.57 Aligned_cols=43 Identities=16% Similarity=0.198 Sum_probs=28.3
Q ss_pred CceeEEeeecCCCCHHHHHHHH---HHcCCCEEEEeecCccccccchhhH
Q 021762 189 PVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSS 235 (308)
Q Consensus 189 ~~~V~~AMrY~~P~I~eal~~L---~~~GidrIVvLPLyPqyS~sTtgS~ 235 (308)
.++|..|- +..+++|+++.. ++.|+|-++++| |.|...|-...
T Consensus 70 r~pvi~Gv--g~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~s~~~l 115 (291)
T 3a5f_A 70 RIPVIAGT--GSNNTAASIAMSKWAESIGVDGLLVIT--PYYNKTTQKGL 115 (291)
T ss_dssp SSCEEEEC--CCSSHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHH
T ss_pred CCcEEEeC--CcccHHHHHHHHHHHHhcCCCEEEEcC--CCCCCCCHHHH
Confidence 56666553 567888888754 456999888876 55655544333
No 89
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=24.08 E-value=2.2e+02 Score=23.91 Aligned_cols=13 Identities=8% Similarity=0.112 Sum_probs=7.3
Q ss_pred HHHHHHHHHcCCC
Q 021762 204 EEAVQQIKRDRIT 216 (308)
Q Consensus 204 ~eal~~L~~~Gid 216 (308)
.+.++++.+.|+-
T Consensus 89 ~~~~~~~~~~~iP 101 (298)
T 3tb6_A 89 IGYYLNLEKNGIP 101 (298)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHhcCCC
Confidence 3555566655554
No 90
>3qi7_A Putative transcriptional regulator; periplasmic binding protein-like, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.86A {Clostridium difficile}
Probab=23.78 E-value=4.4e+02 Score=24.95 Aligned_cols=69 Identities=4% Similarity=0.033 Sum_probs=39.6
Q ss_pred HHHHHHHHHcCCCEEEEeecCccccccchhhHHHHHHHHHHHhccCCCCCeEEccCCCCChHHHHHHHHHHH
Q 021762 204 EEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQ 275 (308)
Q Consensus 204 ~eal~~L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~e~~~~~~i~v~~I~~~~~~p~YI~a~a~~I~ 275 (308)
..+++.|.+.|+++|+.+--..+.+..+...=.+-+.+++++.+.. .......+|-.+.+| ++..+.|.
T Consensus 145 y~A~~~Li~~Ghk~Ia~Isgp~~~~~~~~~~R~~Gyk~Al~e~Gi~--~~~~~~~d~t~e~G~-~~a~~lL~ 213 (371)
T 3qi7_A 145 KVLAERSKEMGAKAFIHYASTDDLKDVNIAKRLEMIKETCKNIGLP--FVQVNTPNINTEEDK-NKVKQFLN 213 (371)
T ss_dssp HHHHHHHHHTTCSCEEEEEETTGGGSHHHHHHHHHHHHHHHHTTCC--EEEEEECCCSSTHHH-HHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEEeccccccchhHHHHHHHHHHHHHHcCCC--ceeecCCCCchHHHH-HHHHHHHh
Confidence 4677888899999998887444544433332344566777775421 112344556555555 44444444
No 91
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=23.11 E-value=4.3e+02 Score=24.29 Aligned_cols=98 Identities=12% Similarity=0.011 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHhcCCCceeEEeeecCCCCHHHHHHHHHHcCCCEEEEee------cCccccccchhhHHHHHHHHHH
Q 021762 171 ITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLP------LYPQFSISTTGSSIRVLQNIFR 244 (308)
Q Consensus 171 iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~eal~~L~~~GidrIVvLP------LyPqyS~sTtgS~~~~l~ea~~ 244 (308)
.+++..+++.+.|.+.+.+.-+++| +.=+. ++..++.+.|+. +|.+| |..-.-+...+|+++.+.+++.
T Consensus 77 ~~~e~~~~~~~~l~~~~Id~L~~IG---GdgS~-~~a~~l~~~~i~-vigiPkTIDNDl~~td~t~GfdTA~~~~~~ai~ 151 (319)
T 4a3s_A 77 KTVEGREKGIANLKKLGIEGLVVIG---GDGSY-MGAKKLTEHGFP-CVGVPGTIDNDIPGTDFTIGFDTALNTVIDAID 151 (319)
T ss_dssp HSHHHHHHHHHHHHHHTCCEEEEEE---CTTHH-HHHHHHHHTTCC-EEEEEEETTCCCTTCSCCEEHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCCEEEEeC---CcHHH-HHHHHHhccCCc-EEEeeccccCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 3556667777788888999999998 33333 455677888884 89999 4443333445566655555543
Q ss_pred Hhcc--CCCCCeEEccCCCCChHHHHHHHHH
Q 021762 245 EDAY--LSRLPVSIIRSWYQREGYVNSMADL 273 (308)
Q Consensus 245 e~~~--~~~i~v~~I~~~~~~p~YI~a~a~~ 273 (308)
+... ...-++-+|+=...+-+|+.+.+..
T Consensus 152 ~i~~~a~s~~rv~ivEvMGR~aG~lA~~a~l 182 (319)
T 4a3s_A 152 KIRDTATSHERTYVIEVMGRHAGDIALWAGL 182 (319)
T ss_dssp HHHHHHHHHTCEEEEEECCTTCCHHHHHHHH
T ss_pred HHHhhhhccCCeEEEEeCCcchhHHHHHHHh
Confidence 2220 0112577888888888888776643
No 92
>4f06_A Extracellular ligand-binding receptor; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: MSE PHB; 1.30A {Rhodopseudomonas palustris} PDB: 4evs_A*
Probab=22.50 E-value=1.8e+02 Score=25.94 Aligned_cols=52 Identities=19% Similarity=0.048 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHHHHHHhcCCCceeEEeeecCCCCHHHHHHHHHHcCCCEEEE
Q 021762 169 RKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVV 220 (308)
Q Consensus 169 ~~iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~eal~~L~~~GidrIVv 220 (308)
..+.+..++.+++.+.+.|.++.....+..+.......+.++++.++|-|++
T Consensus 149 ~~~g~~~~~~~~~~~~~~g~~vv~~~~~~~~~~d~~~~l~~i~~~~pd~v~~ 200 (371)
T 4f06_A 149 YGPGIDAETAFKKTFEAEGGKVVEAVRMPLSTTDFGPIMQRIKNSGADMIFT 200 (371)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEECTTCCCCHHHHHHHHHHTCSEEEE
T ss_pred cccchhHHHHHHHHHHhcCCceEEEEecCcccccHHHHHHHHHhcCCCEEEE
Confidence 3467778888999998887766556667777888899999999999996554
No 93
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=22.29 E-value=3.6e+02 Score=22.82 Aligned_cols=12 Identities=17% Similarity=0.304 Sum_probs=5.7
Q ss_pred HHHHHHHHcCCC
Q 021762 205 EAVQQIKRDRIT 216 (308)
Q Consensus 205 eal~~L~~~Gid 216 (308)
+.++++.+.|+-
T Consensus 81 ~~~~~l~~~~iP 92 (290)
T 2rgy_A 81 EDLDELHRMHPK 92 (290)
T ss_dssp HHHHHHHHHCSS
T ss_pred HHHHHHhhcCCC
Confidence 444555444543
No 94
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=22.12 E-value=1.9e+02 Score=25.46 Aligned_cols=50 Identities=4% Similarity=-0.140 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCceeEEeeecCCCCHHHHHHHHHHcCCCEEEE
Q 021762 170 KITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVV 220 (308)
Q Consensus 170 ~iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~eal~~L~~~GidrIVv 220 (308)
.+.+..++.+++.|.+.|..+.... +..+.......++++++.+.|-|++
T Consensus 161 ~~~~~~~~~~~~~~~~~G~~v~~~~-~~~~~~d~~~~~~~l~~~~~d~v~~ 210 (366)
T 3td9_A 161 DYSVGLSNFFINKFTELGGQVKRVF-FRSGDQDFSAQLSVAMSFNPDAIYI 210 (366)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEE-ECTTCCCCHHHHHHHHHTCCSEEEE
T ss_pred cHHHHHHHHHHHHHHHCCCEEEEEE-eCCCCccHHHHHHHHHhcCCCEEEE
Confidence 4666778888999988876655445 6667788889999999999885444
No 95
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=22.10 E-value=2.8e+02 Score=23.27 Aligned_cols=14 Identities=21% Similarity=0.211 Sum_probs=7.2
Q ss_pred HHHHHHHHHHcCCC
Q 021762 203 TEEAVQQIKRDRIT 216 (308)
Q Consensus 203 I~eal~~L~~~Gid 216 (308)
..+.++++.+.|+-
T Consensus 75 ~~~~~~~~~~~~iP 88 (291)
T 3l49_A 75 LNPWLQKINDAGIP 88 (291)
T ss_dssp HHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHCCCc
Confidence 34455555555554
No 96
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=21.95 E-value=1.3e+02 Score=28.62 Aligned_cols=48 Identities=17% Similarity=0.153 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHhcCCCceeEEeeecCCCCHHHHHHHHHHcCCCEEEE
Q 021762 171 ITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVV 220 (308)
Q Consensus 171 iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~eal~~L~~~GidrIVv 220 (308)
.|++.|+++.+.|.+.|.+..++--+.-..+.+.++++++.+ ++.|++
T Consensus 278 nTe~mA~~ia~gl~~~Gv~~~~~~~~d~~~~~~s~i~~~i~~--~~~ivl 325 (410)
T 4dik_A 278 FVENVMKKAIDSLKEKGFTPVVYKFSDEERPAISEILKDIPD--SEALIF 325 (410)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEECSSCCCCHHHHHHHSTT--CSEEEE
T ss_pred hHHHHHHHHHHHHHhcCCceEEEEeccCCCCCHHHHHHHHHh--CCeEEE
Confidence 799999999999998887665544445566777888877763 444443
No 97
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=21.94 E-value=2e+02 Score=27.54 Aligned_cols=69 Identities=13% Similarity=-0.032 Sum_probs=32.5
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHhcCCCceeEEeeecCCCCHHHHHHHHHH-cCCCEEEEeecCccccccchhhHHHHHH
Q 021762 162 IGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKR-DRITRLVVLPLYPQFSISTTGSSIRVLQ 240 (308)
Q Consensus 162 IGggSPL~~iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~eal~~L~~-~GidrIVvLPLyPqyS~sTtgS~~~~l~ 240 (308)
|+ +-|+..+.-+.+.++ |.+ ++.+--.|..-.+++.+.++.+ .|.+ +..+ .|.....||-++....
T Consensus 37 v~-gkp~i~~~l~~~~~~-------g~~-~i~vv~~~~~~~i~~~~~~~~~~~~~~-i~~~---~q~~~lGTa~Av~~a~ 103 (501)
T 3st8_A 37 LA-GRSMLSHVLHAIAKL-------APQ-RLIVVLGHDHQRIAPLVGELADTLGRT-IDVA---LQDRPLGTGHAVLCGL 103 (501)
T ss_dssp ET-TEEHHHHHHHHHHHH-------CCS-EEEEEECTTHHHHHHHHHHHHHHHTSC-CEEE---ECSSCCCHHHHHHHHH
T ss_pred EC-ChhHHHHHHHHHHhC-------CCC-EEEEEeCCCHHHHHHHHHHHHHhcCCc-EEEE---EcCCCCCcHHHHHHHH
Confidence 44 458888876554433 221 3343344554444555544332 2443 2222 2444456666555444
Q ss_pred HHH
Q 021762 241 NIF 243 (308)
Q Consensus 241 ea~ 243 (308)
+.+
T Consensus 104 ~~l 106 (501)
T 3st8_A 104 SAL 106 (501)
T ss_dssp TTS
T ss_pred HHh
Confidence 433
No 98
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=21.52 E-value=2.1e+02 Score=25.01 Aligned_cols=53 Identities=15% Similarity=0.100 Sum_probs=38.6
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCceeEEeeecCCCCHHHHHHHHHHcCCCEEEE
Q 021762 168 LRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVV 220 (308)
Q Consensus 168 L~~iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~eal~~L~~~GidrIVv 220 (308)
-..+.+...+.+++.|.+.|..+.....+..........++++++.+.|-|++
T Consensus 148 ~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~~~d~i~~ 200 (358)
T 3hut_A 148 TTDWGLSSAQAFRKAFELRGGAVVVNEEVPPGNRRFDDVIDEIEDEAPQAIYL 200 (358)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCEEEEEEEECTTCCCCHHHHHHHHHHCCSEEEE
T ss_pred CcHHHHHHHHHHHHHHHHcCCEEEEEEecCCCCccHHHHHHHHHhcCCCEEEE
Confidence 34577788888999998887655444445556778888999999888884443
No 99
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=21.45 E-value=2.6e+02 Score=24.88 Aligned_cols=51 Identities=12% Similarity=0.016 Sum_probs=35.6
Q ss_pred eeecCCCCHHHHHHHHHHcCCCEEEEeecCccc-cccchhhHHHHHHHHHHH
Q 021762 195 GMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQF-SISTTGSSIRVLQNIFRE 245 (308)
Q Consensus 195 AMrY~~P~I~eal~~L~~~GidrIVvLPLyPqy-S~sTtgS~~~~l~ea~~e 245 (308)
+...++|..++++++....|+|+++++..-+.| ....+..+-+.+.+++++
T Consensus 63 av~~G~~~a~~~lr~ala~GaD~vi~v~~d~~~~~~~~~~~~A~~La~~i~~ 114 (255)
T 1efv_B 63 AVSCGPAQCQETIRTALAMGADRGIHVEVPPAEAERLGPLQVARVLAKLAEK 114 (255)
T ss_dssp EEEEESTTHHHHHHHHHHHTCSEEEEEECCHHHHTTCCHHHHHHHHHHHHHH
T ss_pred EEEeCChhHHHHHHHHHhcCCCEEEEEecChhhcccCCHHHHHHHHHHHHHh
Confidence 455567789999999888899999999865655 333344444555555555
No 100
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=21.43 E-value=3.2e+02 Score=24.21 Aligned_cols=49 Identities=8% Similarity=-0.022 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHhcCCCceeEEeeecCC--CCHHHHHHHHHHcCCCEEEEeec
Q 021762 171 ITDEQAQALKTALEAKNLPVNVYVGMRYWY--PFTEEAVQQIKRDRITRLVVLPL 223 (308)
Q Consensus 171 iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~--P~I~eal~~L~~~GidrIVvLPL 223 (308)
+..+..+.+++.+. | +.+.+...... ....+.++.+...++|-||++|.
T Consensus 87 ~~~~~~~gi~~~a~--g--~~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~ 137 (366)
T 3h5t_A 87 ASVDFLAGVAQAAG--D--TQLTLIPASPASSVDHVSAQQLVNNAAVDGVVIYSV 137 (366)
T ss_dssp HHHHHHHHHHHHSS--S--CEEEEEECCCCTTCCHHHHHHHHHTCCCSCEEEESC
T ss_pred HHHHHHHHHHHHHh--h--CCEEEEEcCCCccHHHHHHHHHHHhCCCCEEEEecC
Confidence 44566777777765 3 44443332222 24677888999999999999875
No 101
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=21.31 E-value=2.4e+02 Score=25.00 Aligned_cols=78 Identities=8% Similarity=0.074 Sum_probs=46.1
Q ss_pred CchhHHHHHHHHHHHHHHHhcCCCceeEEeeecCCCCHHHHHHHHHHcCCCEEEEeecCccc-cccchhhHHHHHHHHHH
Q 021762 166 SPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQF-SISTTGSSIRVLQNIFR 244 (308)
Q Consensus 166 SPL~~iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~eal~~L~~~GidrIVvLPLyPqy-S~sTtgS~~~~l~ea~~ 244 (308)
+-++.++.+-.++- .+|.+.|...+| .+...++|..++++++....|+|+++++..-+.| ....+..+-..+.++++
T Consensus 33 ~~lnp~d~~Ale~A-~~Lke~g~~~~V-~av~~G~~~a~~~lr~ala~GaD~vi~v~~d~~~~~~~~~~~~a~~La~~i~ 110 (252)
T 1efp_B 33 MSMNPFDEIAVEEA-IRLKEKGQAEEI-IAVSIGVKQAAETLRTALAMGADRAILVVAADDVQQDIEPLAVAKILAAVAR 110 (252)
T ss_dssp EEECHHHHHHHHHH-HHHHTTTSCSEE-EEEEEESGGGHHHHHHHHHHTCSEEEEEECCSSTTCCCCHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHH-HHHHhcCCCceE-EEEEeCChhHHHHHHHHHhcCCCEEEEEecChhhcccCCHHHHHHHHHHHHH
Confidence 34555555433321 124333331122 2445567778999999888899999999866666 44444445455666665
Q ss_pred H
Q 021762 245 E 245 (308)
Q Consensus 245 e 245 (308)
+
T Consensus 111 ~ 111 (252)
T 1efp_B 111 A 111 (252)
T ss_dssp H
T ss_pred h
Confidence 5
No 102
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=21.25 E-value=3.7e+02 Score=24.80 Aligned_cols=12 Identities=17% Similarity=0.332 Sum_probs=5.3
Q ss_pred HHHHHHHHcCCC
Q 021762 205 EAVQQIKRDRIT 216 (308)
Q Consensus 205 eal~~L~~~Gid 216 (308)
+.+++|.+.|+|
T Consensus 77 ~~l~~l~~~g~d 88 (356)
T 3s99_A 77 RSIKRIARAGNK 88 (356)
T ss_dssp HHHHHHHHTTCS
T ss_pred HHHHHHHHCCCC
Confidence 344444444444
No 103
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=21.10 E-value=2.7e+02 Score=24.01 Aligned_cols=53 Identities=6% Similarity=-0.036 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHhcCCCceeEEeeecCCCCH-HHHHHHHHHcCCCEEEEeecCc
Q 021762 171 ITDEQAQALKTALEAKNLPVNVYVGMRYWYPFT-EEAVQQIKRDRITRLVVLPLYP 225 (308)
Q Consensus 171 iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I-~eal~~L~~~GidrIVvLPLyP 225 (308)
+..+..+.+++.+.+.| +.+.+....+.+.- .+.++.+...++|-||+.|.-+
T Consensus 17 ~~~~~~~gi~~~a~~~g--~~~~~~~~~~~~~~~~~~i~~~~~~~vdgiIi~~~~~ 70 (330)
T 3uug_A 17 RWIDDGNNIVKQLQEAG--YKTDLQYADDDIPNQLSQIENMVTKGVKVLVIASIDG 70 (330)
T ss_dssp HHHHHHHHHHHHHHHTT--CEEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSG
T ss_pred HHHHHHHHHHHHHHHcC--CEEEEeeCCCCHHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 44456667777777765 44444433333332 3567788888999999887654
No 104
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=20.72 E-value=2.2e+02 Score=24.90 Aligned_cols=52 Identities=12% Similarity=0.049 Sum_probs=38.0
Q ss_pred hHHHHHHHHHHHHHHHhcCCCceeEEeeecCCCCHHHHHHHHHHcCCCEEEE
Q 021762 169 RKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVV 220 (308)
Q Consensus 169 ~~iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~eal~~L~~~GidrIVv 220 (308)
..+.+..++.+++.|.+.|..+.....+..+.......++++++.+.|-|++
T Consensus 149 ~~~g~~~~~~~~~~l~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~v~~ 200 (368)
T 4eyg_A 149 YAPGNDALAFFKERFTAGGGEIVEEIKVPLANPDFAPFLQRMKDAKPDAMFV 200 (368)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEECSSSCCCHHHHHHHHHHCCSEEEE
T ss_pred chHhHHHHHHHHHHHHHcCCEEEEEEeCCCCCCcHHHHHHHHHhcCCCEEEE
Confidence 3466777888888898877655444445556778888999999988885554
No 105
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=20.63 E-value=2.6e+02 Score=24.37 Aligned_cols=51 Identities=14% Similarity=0.112 Sum_probs=38.1
Q ss_pred hHHHHHHHHHHHHHHHhcCCCceeEEeeecCCCCHHHHHHHHHHcCCCEEE
Q 021762 169 RKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLV 219 (308)
Q Consensus 169 ~~iT~~Qa~aL~~~L~~~g~~~~V~~AMrY~~P~I~eal~~L~~~GidrIV 219 (308)
..+.+...+.+++.|.+.|..+.....+..........++++++.+.|-|+
T Consensus 148 ~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~v~ 198 (356)
T 3ipc_A 148 TPYGQGLADETKKAANAAGVTEVMYEGVNVGDKDFSALISKMKEAGVSIIY 198 (356)
T ss_dssp SHHHHHHHHHHHHHHHHTTCCCSEEEECCTTCCCCHHHHHHHHHTTCCEEE
T ss_pred ChHHHHHHHHHHHHHHHcCCEEEEEEeeCCCCCCHHHHHHHHHhcCCCEEE
Confidence 356777888899999888876644444555677888999999998888544
No 106
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=20.59 E-value=1.8e+02 Score=23.48 Aligned_cols=28 Identities=21% Similarity=0.183 Sum_probs=21.2
Q ss_pred CCchhHHHHHHHHHHHHHHHhcCCCceeE
Q 021762 165 GSPLRKITDEQAQALKTALEAKNLPVNVY 193 (308)
Q Consensus 165 gSPL~~iT~~Qa~aL~~~L~~~g~~~~V~ 193 (308)
+|| .-.|+..++++.+.|.+.|.++++.
T Consensus 13 ~S~-~g~T~~la~~i~~~l~~~g~~v~~~ 40 (200)
T 2a5l_A 13 YSR-HGATAEMARQIARGVEQGGFEARVR 40 (200)
T ss_dssp CCS-SSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred eCC-CChHHHHHHHHHHHHhhCCCEEEEE
Confidence 466 5689999999999998776555443
No 107
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=20.17 E-value=2.4e+02 Score=24.30 Aligned_cols=68 Identities=16% Similarity=0.191 Sum_probs=43.1
Q ss_pred HHHHHHHHHHcCCCEEEEeecCccccccchhhHHHHHHHHHHHhccCCCCCeEEccCCCCChHHHHHHHHHHHHHHh
Q 021762 203 TEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELG 279 (308)
Q Consensus 203 I~eal~~L~~~GidrIVvLPLyPqyS~sTtgS~~~~l~ea~~e~~~~~~i~v~~I~~~~~~p~YI~a~a~~I~e~l~ 279 (308)
.+++++++...|+|+++++. -|.|....+..+.+.+.+.+++.. +.+-++..=. +=.-++-+|...|.
T Consensus 48 ~~~~~~~~~~~Gad~v~~v~-~~~~~~~~~~~~a~~l~~~i~~~~----p~~Vl~g~t~----~G~~laprlAa~L~ 115 (217)
T 3ih5_A 48 LKEIEKQILPYGVDKLHVFD-AEGLYPYTSLPHTSILVNLFKEEQ----PQICLMGATV----IGRDLGPRVSSALT 115 (217)
T ss_dssp CTTTHHHHGGGTCSEEEEEE-CGGGSSCCHHHHHHHHHHHHHHHC----CSEEEEECSH----HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCEEEEec-CcccccCCHHHHHHHHHHHHHhcC----CCEEEEeCCc----chhhHHHHHHHHhC
Confidence 67888888889999999997 465555556666666666666643 2344444321 22445666666554
Done!