Query 021765
Match_columns 308
No_of_seqs 508 out of 2926
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 05:30:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021765.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021765hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02211 methyl indole-3-aceta 99.9 9.9E-23 2.1E-27 182.9 17.6 126 82-207 5-130 (273)
2 PLN02965 Probable pheophorbida 99.9 1.6E-22 3.4E-27 179.5 16.0 108 96-203 4-111 (255)
3 PLN02824 hydrolase, alpha/beta 99.9 1E-20 2.2E-25 171.1 19.0 116 82-199 16-137 (294)
4 TIGR02240 PHA_depoly_arom poly 99.9 8.3E-21 1.8E-25 170.3 16.8 116 82-200 10-127 (276)
5 PRK00870 haloalkane dehalogena 99.9 4E-20 8.6E-25 168.1 19.8 115 85-200 35-151 (302)
6 PHA02857 monoglyceride lipase; 99.8 1E-19 2.2E-24 163.0 17.7 120 81-200 8-133 (276)
7 PLN02679 hydrolase, alpha/beta 99.8 4.4E-19 9.4E-24 165.4 21.2 103 95-199 88-191 (360)
8 PRK03592 haloalkane dehalogena 99.8 3.9E-19 8.5E-24 160.9 20.3 114 82-199 15-128 (295)
9 PLN02385 hydrolase; alpha/beta 99.8 7.1E-19 1.5E-23 163.3 18.9 123 78-200 66-198 (349)
10 TIGR03343 biphenyl_bphD 2-hydr 99.8 6.1E-19 1.3E-23 158.0 17.7 114 84-199 20-136 (282)
11 PRK03204 haloalkane dehalogena 99.8 1.2E-18 2.5E-23 157.5 19.6 115 82-199 22-136 (286)
12 TIGR03056 bchO_mg_che_rel puta 99.8 8E-19 1.7E-23 156.3 17.9 117 81-199 13-130 (278)
13 PRK10749 lysophospholipase L2; 99.8 1.8E-18 3.9E-23 159.4 20.0 120 79-199 36-166 (330)
14 PLN02578 hydrolase 99.8 1E-18 2.2E-23 162.6 18.2 114 82-199 74-187 (354)
15 PF12697 Abhydrolase_6: Alpha/ 99.8 4.2E-20 9E-25 157.7 8.0 101 98-200 1-102 (228)
16 TIGR03611 RutD pyrimidine util 99.8 8.6E-19 1.9E-23 153.4 16.4 107 93-201 11-117 (257)
17 PLN02298 hydrolase, alpha/beta 99.8 1.5E-18 3.2E-23 159.8 18.2 120 80-199 39-169 (330)
18 PRK10349 carboxylesterase BioH 99.8 1.1E-18 2.3E-23 154.7 15.0 97 96-200 14-110 (256)
19 KOG4178 Soluble epoxide hydrol 99.8 7.8E-18 1.7E-22 150.0 17.5 120 80-200 28-149 (322)
20 TIGR02427 protocat_pcaD 3-oxoa 99.8 5.9E-18 1.3E-22 146.9 15.4 104 94-200 12-115 (251)
21 PLN03084 alpha/beta hydrolase 99.8 2.2E-17 4.8E-22 154.5 19.5 118 81-200 112-233 (383)
22 PLN02652 hydrolase; alpha/beta 99.8 8.5E-17 1.8E-21 151.4 23.4 105 94-199 135-245 (395)
23 PRK11126 2-succinyl-6-hydroxy- 99.8 7.1E-18 1.5E-22 147.7 13.7 100 95-199 2-102 (242)
24 COG2267 PldB Lysophospholipase 99.8 2.6E-17 5.6E-22 149.3 17.4 108 96-203 35-146 (298)
25 TIGR01250 pro_imino_pep_2 prol 99.8 4.3E-17 9.2E-22 144.7 18.5 105 94-199 24-131 (288)
26 PRK10673 acyl-CoA esterase; Pr 99.8 1.3E-17 2.9E-22 147.0 14.0 104 93-200 14-117 (255)
27 TIGR03695 menH_SHCHC 2-succiny 99.8 1.6E-17 3.6E-22 143.6 14.3 103 95-199 1-105 (251)
28 TIGR01738 bioH putative pimelo 99.8 1.7E-17 3.7E-22 143.6 13.9 98 95-200 4-101 (245)
29 PRK14875 acetoin dehydrogenase 99.7 1.8E-16 3.9E-21 147.7 19.4 114 83-199 118-232 (371)
30 KOG4409 Predicted hydrolase/ac 99.7 4.3E-17 9.3E-22 145.8 14.0 119 82-202 74-198 (365)
31 PRK06489 hypothetical protein; 99.7 3.6E-17 7.9E-22 152.5 13.9 104 95-199 69-189 (360)
32 PLN03087 BODYGUARD 1 domain co 99.7 7.1E-17 1.5E-21 154.4 16.1 117 82-199 184-309 (481)
33 KOG1455 Lysophospholipase [Lip 99.7 1.7E-16 3.7E-21 139.5 17.0 107 96-202 55-167 (313)
34 PRK13604 luxD acyl transferase 99.7 6E-16 1.3E-20 139.1 19.3 194 78-292 14-225 (307)
35 PRK05077 frsA fermentation/res 99.7 1.6E-15 3.4E-20 143.8 21.1 126 73-199 168-300 (414)
36 KOG1454 Predicted hydrolase/ac 99.7 2.6E-16 5.6E-21 144.3 14.5 106 94-200 57-167 (326)
37 COG1647 Esterase/lipase [Gener 99.7 1.3E-16 2.9E-21 134.0 10.8 102 95-200 15-119 (243)
38 PRK08775 homoserine O-acetyltr 99.7 9.2E-17 2E-21 148.8 11.0 116 82-200 44-174 (343)
39 TIGR03101 hydr2_PEP hydrolase, 99.7 1.5E-15 3.3E-20 135.2 16.8 103 95-199 25-134 (266)
40 PLN02894 hydrolase, alpha/beta 99.7 4.5E-15 9.7E-20 140.3 20.8 108 92-201 102-213 (402)
41 PRK05855 short chain dehydroge 99.7 1.8E-15 3.8E-20 149.0 16.9 116 81-197 10-129 (582)
42 TIGR01249 pro_imino_pep_1 prol 99.7 1.2E-15 2.6E-20 139.1 13.7 120 80-201 11-132 (306)
43 PLN02511 hydrolase 99.6 1.4E-15 3E-20 143.2 12.7 106 93-199 98-210 (388)
44 PLN02980 2-oxoglutarate decarb 99.6 4.6E-15 1E-19 160.6 18.1 104 94-199 1370-1480(1655)
45 TIGR01607 PST-A Plasmodium sub 99.6 2.6E-15 5.7E-20 138.5 13.4 118 82-199 6-185 (332)
46 TIGR01392 homoserO_Ac_trn homo 99.6 1.7E-15 3.7E-20 140.7 12.1 119 82-201 14-164 (351)
47 PRK07581 hypothetical protein; 99.6 1.5E-15 3.3E-20 140.3 9.5 105 95-200 41-160 (339)
48 PRK11071 esterase YqiA; Provis 99.6 1.4E-14 2.9E-19 123.2 13.6 156 96-294 2-161 (190)
49 PRK00175 metX homoserine O-ace 99.6 9.4E-15 2E-19 137.2 12.6 106 95-201 48-184 (379)
50 PRK10566 esterase; Provisional 99.6 8.4E-14 1.8E-18 122.7 15.2 99 94-194 26-136 (249)
51 PF12695 Abhydrolase_5: Alpha/ 99.6 7.7E-14 1.7E-18 112.3 13.1 92 97-197 1-93 (145)
52 TIGR01840 esterase_phb esteras 99.5 4.1E-13 8.8E-18 116.0 16.8 108 93-201 11-132 (212)
53 TIGR03100 hydr1_PEP hydrolase, 99.5 1E-12 2.2E-17 118.1 17.7 103 94-201 25-136 (274)
54 TIGR01836 PHA_synth_III_C poly 99.5 4E-13 8.6E-18 124.9 15.5 102 95-201 62-173 (350)
55 TIGR03230 lipo_lipase lipoprot 99.5 2.2E-13 4.7E-18 128.6 13.6 108 92-201 38-156 (442)
56 PRK10985 putative hydrolase; P 99.5 1.1E-12 2.3E-17 120.7 17.3 105 94-199 57-168 (324)
57 KOG2564 Predicted acetyltransf 99.5 2.7E-13 5.8E-18 117.8 11.5 106 92-198 71-181 (343)
58 TIGR01838 PHA_synth_I poly(R)- 99.5 1.4E-12 3E-17 126.3 17.4 108 94-202 187-305 (532)
59 cd00707 Pancreat_lipase_like P 99.5 3E-13 6.6E-18 121.5 10.2 110 91-201 32-149 (275)
60 KOG2984 Predicted hydrolase [G 99.4 3.8E-13 8.2E-18 111.7 4.7 200 81-288 28-235 (277)
61 PLN02442 S-formylglutathione h 99.4 3.8E-11 8.2E-16 108.4 17.7 106 94-200 46-179 (283)
62 PF06342 DUF1057: Alpha/beta h 99.4 1.4E-11 3.1E-16 108.0 13.2 109 96-206 36-146 (297)
63 TIGR02821 fghA_ester_D S-formy 99.4 6.2E-11 1.4E-15 106.5 17.8 106 94-199 41-173 (275)
64 PRK06765 homoserine O-acetyltr 99.3 2.1E-11 4.6E-16 114.6 15.2 107 95-202 56-199 (389)
65 KOG4667 Predicted esterase [Li 99.3 4.3E-11 9.4E-16 100.5 14.9 202 75-289 12-219 (269)
66 COG0596 MhpC Predicted hydrola 99.3 2.5E-11 5.4E-16 104.4 14.1 102 95-200 21-124 (282)
67 KOG1552 Predicted alpha/beta h 99.3 4.5E-11 9.8E-16 103.5 14.6 110 87-199 50-163 (258)
68 PLN02872 triacylglycerol lipas 99.3 6.9E-12 1.5E-16 117.9 9.8 104 95-200 74-198 (395)
69 PLN00021 chlorophyllase 99.3 1.7E-11 3.6E-16 112.0 11.9 102 92-199 49-166 (313)
70 KOG4391 Predicted alpha/beta h 99.3 1.4E-11 3E-16 103.5 9.7 109 91-200 74-185 (300)
71 PF00561 Abhydrolase_1: alpha/ 99.3 1.4E-11 3E-16 106.1 9.0 75 123-198 1-78 (230)
72 PRK07868 acyl-CoA synthetase; 99.3 6.1E-11 1.3E-15 124.1 15.3 102 94-199 66-177 (994)
73 PRK11460 putative hydrolase; P 99.3 7.6E-11 1.6E-15 103.4 13.5 105 93-197 14-136 (232)
74 TIGR03502 lipase_Pla1_cef extr 99.3 6E-11 1.3E-15 118.6 13.9 90 95-184 449-575 (792)
75 KOG2382 Predicted alpha/beta h 99.2 7.2E-11 1.6E-15 105.6 11.2 189 93-286 50-270 (315)
76 PF12146 Hydrolase_4: Putative 99.2 8.4E-11 1.8E-15 85.2 9.1 64 95-158 16-79 (79)
77 TIGR00976 /NonD putative hydro 99.2 8.2E-11 1.8E-15 115.7 11.9 121 79-199 2-132 (550)
78 PF06500 DUF1100: Alpha/beta h 99.2 5E-10 1.1E-14 104.2 15.9 128 71-199 163-296 (411)
79 PF00975 Thioesterase: Thioest 99.2 1.5E-10 3.2E-15 100.7 11.7 104 96-202 1-107 (229)
80 PF07819 PGAP1: PGAP1-like pro 99.2 8.9E-10 1.9E-14 96.0 13.8 105 94-202 3-126 (225)
81 PF00326 Peptidase_S9: Prolyl 99.1 4E-10 8.6E-15 97.2 11.5 164 111-301 3-176 (213)
82 COG1506 DAP2 Dipeptidyl aminop 99.1 1.5E-09 3.2E-14 108.3 16.5 200 72-299 364-581 (620)
83 COG0429 Predicted hydrolase of 99.1 6.6E-09 1.4E-13 93.2 17.5 106 93-198 73-184 (345)
84 PF10230 DUF2305: Uncharacteri 99.1 3.2E-09 6.9E-14 94.9 14.3 114 95-208 2-131 (266)
85 PF02230 Abhydrolase_2: Phosph 99.0 2.6E-09 5.7E-14 92.5 10.8 111 91-201 10-142 (216)
86 KOG1838 Alpha/beta hydrolase [ 99.0 2.4E-08 5.2E-13 92.5 17.2 106 93-198 123-234 (409)
87 PRK10162 acetyl esterase; Prov 99.0 1.5E-08 3.2E-13 93.0 14.3 122 75-200 59-196 (318)
88 TIGR01839 PHA_synth_II poly(R) 98.9 1.2E-08 2.6E-13 98.5 13.6 104 95-202 215-331 (560)
89 COG3319 Thioesterase domains o 98.9 1.1E-08 2.5E-13 90.2 11.6 101 96-200 1-104 (257)
90 COG3208 GrsT Predicted thioest 98.9 1.3E-08 2.8E-13 87.7 10.9 106 93-200 5-113 (244)
91 PF01738 DLH: Dienelactone hyd 98.9 1.8E-08 3.9E-13 87.2 12.0 103 94-197 13-130 (218)
92 PF12740 Chlorophyllase2: Chlo 98.9 1.7E-08 3.8E-13 88.7 11.0 102 92-199 14-131 (259)
93 COG0400 Predicted esterase [Ge 98.9 1.6E-08 3.5E-13 86.6 10.6 110 92-202 15-137 (207)
94 PRK10252 entF enterobactin syn 98.9 1.9E-08 4.1E-13 108.4 12.5 104 93-200 1066-1172(1296)
95 COG2945 Predicted hydrolase of 98.8 5.1E-08 1.1E-12 80.9 11.1 105 93-198 26-136 (210)
96 KOG2565 Predicted hydrolases o 98.8 2E-08 4.3E-13 90.8 8.8 117 80-197 130-262 (469)
97 PF08538 DUF1749: Protein of u 98.8 3.5E-08 7.6E-13 88.4 10.2 108 94-205 32-154 (303)
98 PRK10115 protease 2; Provision 98.8 1.1E-07 2.4E-12 95.7 14.9 204 73-300 416-637 (686)
99 PF01674 Lipase_2: Lipase (cla 98.8 6.3E-09 1.4E-13 89.9 5.1 87 96-185 2-96 (219)
100 PF06821 Ser_hydrolase: Serine 98.8 2.7E-08 5.8E-13 83.0 8.5 89 98-200 1-92 (171)
101 PF10503 Esterase_phd: Esteras 98.8 1.5E-07 3.2E-12 81.5 12.8 109 94-202 15-135 (220)
102 PLN02733 phosphatidylcholine-s 98.7 7.7E-08 1.7E-12 91.5 10.1 89 106-199 105-201 (440)
103 PF00151 Lipase: Lipase; Inte 98.7 1.6E-08 3.6E-13 92.9 5.0 110 92-202 68-190 (331)
104 PF02129 Peptidase_S15: X-Pro 98.6 2.3E-07 5.1E-12 83.2 11.0 108 93-200 18-137 (272)
105 PF05728 UPF0227: Uncharacteri 98.6 2.8E-07 6.2E-12 77.8 10.5 86 98-199 2-91 (187)
106 COG3571 Predicted hydrolase of 98.6 6.5E-07 1.4E-11 72.3 11.8 109 96-205 15-130 (213)
107 PF07224 Chlorophyllase: Chlor 98.6 1.5E-07 3.3E-12 81.8 8.5 104 92-200 43-158 (307)
108 PF12715 Abhydrolase_7: Abhydr 98.6 5.3E-07 1.2E-11 83.0 12.0 105 93-198 113-259 (390)
109 COG2021 MET2 Homoserine acetyl 98.6 2E-07 4.3E-12 85.0 8.7 108 95-202 51-185 (368)
110 PF03403 PAF-AH_p_II: Platelet 98.6 1.6E-07 3.4E-12 88.1 7.9 110 93-203 98-266 (379)
111 KOG1553 Predicted alpha/beta h 98.6 2.4E-07 5.2E-12 83.2 8.4 101 95-198 243-344 (517)
112 PF06028 DUF915: Alpha/beta hy 98.6 2.6E-07 5.7E-12 81.7 8.5 105 94-199 10-143 (255)
113 PF05057 DUF676: Putative seri 98.5 3.3E-07 7.1E-12 79.5 8.6 88 94-183 3-97 (217)
114 COG0412 Dienelactone hydrolase 98.5 2.5E-06 5.3E-11 75.0 14.1 105 96-201 28-148 (236)
115 PF05448 AXE1: Acetyl xylan es 98.5 8.6E-07 1.9E-11 81.3 11.5 105 93-199 81-209 (320)
116 PF05990 DUF900: Alpha/beta hy 98.5 1.2E-06 2.6E-11 76.8 11.9 109 93-201 16-139 (233)
117 TIGR01849 PHB_depoly_PhaZ poly 98.5 5.4E-06 1.2E-10 77.9 16.6 103 96-202 103-211 (406)
118 COG3458 Acetyl esterase (deace 98.5 5E-07 1.1E-11 78.9 8.3 189 76-288 59-278 (321)
119 PF03096 Ndr: Ndr family; Int 98.5 2.6E-06 5.6E-11 75.8 12.5 115 94-212 22-145 (283)
120 COG1075 LipA Predicted acetylt 98.4 6.4E-07 1.4E-11 82.8 8.3 100 96-199 60-164 (336)
121 smart00824 PKS_TE Thioesterase 98.4 3.3E-06 7.1E-11 71.4 12.1 99 100-202 2-105 (212)
122 KOG2931 Differentiation-relate 98.4 8E-06 1.7E-10 72.2 14.1 115 94-212 45-168 (326)
123 PF07859 Abhydrolase_3: alpha/ 98.4 1.1E-06 2.3E-11 75.3 7.7 97 98-199 1-110 (211)
124 COG0657 Aes Esterase/lipase [L 98.4 1E-05 2.2E-10 74.0 13.8 105 94-202 78-194 (312)
125 COG3545 Predicted esterase of 98.3 4.4E-06 9.5E-11 68.6 9.7 93 96-201 3-96 (181)
126 COG4757 Predicted alpha/beta h 98.3 2.1E-06 4.5E-11 73.4 7.7 117 77-195 9-134 (281)
127 PF03959 FSH1: Serine hydrolas 98.3 2.8E-06 6.1E-11 73.4 8.1 105 94-200 3-146 (212)
128 COG4188 Predicted dienelactone 98.2 3.8E-06 8.2E-11 76.9 7.8 91 94-184 70-179 (365)
129 KOG4627 Kynurenine formamidase 98.2 3E-06 6.4E-11 71.2 6.5 108 85-199 57-172 (270)
130 KOG2624 Triglyceride lipase-ch 98.2 7.4E-06 1.6E-10 76.9 9.3 127 73-200 48-200 (403)
131 KOG3847 Phospholipase A2 (plat 98.2 6.2E-06 1.3E-10 73.4 7.5 110 94-204 117-280 (399)
132 COG4782 Uncharacterized protei 98.1 2E-05 4.3E-10 71.8 10.3 107 93-199 114-234 (377)
133 PF05677 DUF818: Chlamydia CHL 98.1 1.9E-05 4.1E-10 71.5 9.7 94 92-186 134-237 (365)
134 COG3243 PhaC Poly(3-hydroxyalk 98.1 1.1E-05 2.4E-10 74.8 7.6 102 95-201 107-219 (445)
135 PF02273 Acyl_transf_2: Acyl t 98.0 7.7E-05 1.7E-09 64.5 11.2 196 77-289 6-215 (294)
136 COG4814 Uncharacterized protei 98.0 4.5E-05 9.7E-10 66.2 9.8 104 96-200 46-177 (288)
137 PF06057 VirJ: Bacterial virul 98.0 2.6E-05 5.7E-10 65.3 8.1 98 96-200 3-108 (192)
138 PF12048 DUF3530: Protein of u 98.0 0.0003 6.4E-09 64.4 15.3 108 96-204 88-234 (310)
139 PF00756 Esterase: Putative es 98.0 1.8E-05 4E-10 69.6 7.1 51 150-200 99-151 (251)
140 PRK05371 x-prolyl-dipeptidyl a 98.0 4.9E-05 1.1E-09 77.5 10.8 87 113-199 270-373 (767)
141 COG2936 Predicted acyl esteras 98.0 3.3E-05 7.1E-10 74.8 8.9 129 72-200 18-160 (563)
142 PLN02606 palmitoyl-protein thi 97.9 5.3E-05 1.2E-09 68.0 9.3 101 95-199 26-132 (306)
143 KOG2112 Lysophospholipase [Lip 97.9 7.2E-05 1.5E-09 63.2 9.3 105 96-200 4-129 (206)
144 PF02450 LCAT: Lecithin:choles 97.9 6.6E-05 1.4E-09 70.9 9.6 82 110-201 66-162 (389)
145 KOG3724 Negative regulator of 97.9 0.00015 3.3E-09 71.8 12.1 108 94-205 88-226 (973)
146 COG3509 LpqC Poly(3-hydroxybut 97.9 0.00013 2.9E-09 64.8 10.7 106 94-199 60-179 (312)
147 KOG4840 Predicted hydrolases o 97.9 6.2E-05 1.3E-09 64.1 8.2 106 93-202 34-147 (299)
148 KOG3975 Uncharacterized conser 97.9 0.00041 8.8E-09 60.2 12.9 108 92-199 26-147 (301)
149 PRK04940 hypothetical protein; 97.9 9.4E-05 2E-09 61.7 8.9 87 98-201 2-94 (180)
150 PRK10439 enterobactin/ferric e 97.9 0.00025 5.4E-09 67.4 13.0 115 84-199 194-323 (411)
151 PF02089 Palm_thioest: Palmito 97.7 4.2E-05 9.1E-10 68.1 4.9 106 93-199 3-116 (279)
152 PF09752 DUF2048: Uncharacteri 97.7 0.00035 7.6E-09 63.9 10.8 106 93-199 90-210 (348)
153 COG4099 Predicted peptidase [G 97.7 0.00011 2.5E-09 65.2 7.0 102 96-199 192-304 (387)
154 PTZ00472 serine carboxypeptida 97.7 0.00032 7E-09 67.7 10.8 106 93-199 75-216 (462)
155 PLN02633 palmitoyl protein thi 97.7 0.00025 5.4E-09 63.8 9.1 102 94-199 24-131 (314)
156 PF05577 Peptidase_S28: Serine 97.7 0.00052 1.1E-08 65.7 11.9 109 93-201 27-150 (434)
157 KOG2281 Dipeptidyl aminopeptid 97.7 0.00015 3.2E-09 70.3 7.8 100 95-194 642-757 (867)
158 KOG2100 Dipeptidyl aminopeptid 97.6 0.00043 9.3E-09 70.6 10.3 103 95-199 526-644 (755)
159 KOG2541 Palmitoyl protein thio 97.6 0.00042 9.1E-09 60.7 8.7 100 96-199 24-128 (296)
160 PF11339 DUF3141: Protein of u 97.6 0.0025 5.4E-08 60.9 14.3 80 114-200 93-176 (581)
161 cd00312 Esterase_lipase Estera 97.5 0.00021 4.6E-09 69.4 7.5 107 93-201 93-215 (493)
162 COG3150 Predicted esterase [Ge 97.5 0.00063 1.4E-08 55.6 8.7 88 98-199 2-91 (191)
163 KOG2551 Phospholipase/carboxyh 97.5 0.0014 3E-08 56.1 10.5 104 94-200 4-148 (230)
164 PF08840 BAAT_C: BAAT / Acyl-C 97.4 0.00013 2.8E-09 63.1 3.6 54 148-202 4-59 (213)
165 KOG1515 Arylacetamide deacetyl 97.4 0.005 1.1E-07 56.7 14.1 118 80-201 70-209 (336)
166 COG0627 Predicted esterase [Ge 97.3 0.00095 2.1E-08 61.0 7.7 109 94-202 53-190 (316)
167 KOG3967 Uncharacterized conser 97.2 0.0037 8.1E-08 53.1 10.2 104 95-199 101-227 (297)
168 PF03583 LIP: Secretory lipase 97.2 0.0013 2.9E-08 59.5 8.0 72 113-184 17-91 (290)
169 PF10340 DUF2424: Protein of u 97.2 0.0029 6.3E-08 58.8 9.9 105 94-201 121-237 (374)
170 PF06259 Abhydrolase_8: Alpha/ 97.1 0.013 2.9E-07 48.9 12.7 54 148-201 89-146 (177)
171 KOG3101 Esterase D [General fu 97.1 0.00088 1.9E-08 56.8 5.6 105 95-199 44-176 (283)
172 PLN02517 phosphatidylcholine-s 97.1 0.00093 2E-08 65.0 6.4 91 109-201 156-265 (642)
173 cd00741 Lipase Lipase. Lipase 97.1 0.0019 4.1E-08 52.5 6.8 38 164-201 28-69 (153)
174 KOG3043 Predicted hydrolase re 96.9 0.0043 9.3E-08 53.2 7.8 107 94-201 38-156 (242)
175 COG2272 PnbA Carboxylesterase 96.9 0.0031 6.8E-08 60.0 7.4 106 94-200 93-218 (491)
176 PF00135 COesterase: Carboxyle 96.8 0.0033 7.2E-08 61.4 7.3 108 95-202 125-248 (535)
177 PF01764 Lipase_3: Lipase (cla 96.7 0.0042 9.2E-08 49.4 6.3 36 148-184 49-84 (140)
178 KOG2183 Prolylcarboxypeptidase 96.6 0.011 2.4E-07 55.0 8.9 105 96-200 81-203 (492)
179 PF07082 DUF1350: Protein of u 96.6 0.024 5.3E-07 49.6 10.1 94 97-197 19-123 (250)
180 KOG2369 Lecithin:cholesterol a 96.5 0.0054 1.2E-07 58.0 6.3 85 109-199 124-225 (473)
181 COG1770 PtrB Protease II [Amin 96.3 0.025 5.5E-07 55.6 9.6 126 74-199 420-562 (682)
182 KOG2182 Hydrolytic enzymes of 96.2 0.029 6.3E-07 53.5 9.3 109 92-200 83-208 (514)
183 PF11187 DUF2974: Protein of u 96.1 0.018 3.8E-07 50.2 6.6 50 151-202 73-126 (224)
184 cd00519 Lipase_3 Lipase (class 96.1 0.017 3.6E-07 50.3 6.4 36 164-199 128-167 (229)
185 PF00450 Peptidase_S10: Serine 96.0 0.044 9.6E-07 51.8 9.5 109 93-201 38-183 (415)
186 PF04301 DUF452: Protein of un 95.9 0.037 8E-07 47.6 7.4 82 93-200 9-91 (213)
187 COG3946 VirJ Type IV secretory 95.8 0.032 7E-07 51.9 7.4 87 94-187 259-349 (456)
188 PF11288 DUF3089: Protein of u 95.8 0.027 5.9E-07 48.2 6.4 63 123-185 46-116 (207)
189 COG2819 Predicted hydrolase of 95.4 0.022 4.7E-07 50.3 4.4 44 164-207 137-180 (264)
190 PF05705 DUF829: Eukaryotic pr 95.3 1.6 3.5E-05 38.0 16.3 111 97-211 1-124 (240)
191 KOG1202 Animal-type fatty acid 95.1 0.094 2E-06 54.9 8.6 99 91-199 2119-2219(2376)
192 PF11144 DUF2920: Protein of u 95.1 0.32 6.8E-06 45.7 11.4 37 165-201 185-221 (403)
193 PLN00413 triacylglycerol lipas 95.1 0.073 1.6E-06 50.9 7.4 51 148-199 269-327 (479)
194 PLN02162 triacylglycerol lipas 95.1 0.072 1.6E-06 50.8 7.2 49 150-199 265-321 (475)
195 COG2382 Fes Enterochelin ester 95.1 0.043 9.2E-07 49.3 5.4 38 164-201 177-214 (299)
196 PF01083 Cutinase: Cutinase; 94.8 0.093 2E-06 44.0 6.6 80 123-205 40-128 (179)
197 KOG2237 Predicted serine prote 94.7 0.052 1.1E-06 53.3 5.2 127 73-199 441-584 (712)
198 KOG4372 Predicted alpha/beta h 94.6 0.034 7.4E-07 51.8 3.7 90 92-183 77-169 (405)
199 PF05576 Peptidase_S37: PS-10 94.3 0.11 2.4E-06 48.6 6.2 129 85-216 53-188 (448)
200 PLN02454 triacylglycerol lipas 94.2 0.14 3.1E-06 48.2 7.0 34 151-184 214-248 (414)
201 KOG1516 Carboxylesterase and r 94.2 0.13 2.9E-06 50.6 7.1 108 95-202 112-235 (545)
202 PLN02310 triacylglycerol lipas 94.1 0.16 3.6E-06 47.8 7.0 52 148-199 190-248 (405)
203 PF05277 DUF726: Protein of un 93.9 0.17 3.7E-06 46.8 6.7 39 164-202 220-263 (345)
204 COG2939 Carboxypeptidase C (ca 93.5 0.32 7E-06 46.7 7.9 110 94-203 100-240 (498)
205 PLN02571 triacylglycerol lipas 93.5 0.13 2.7E-06 48.7 5.2 38 147-184 208-246 (413)
206 PLN02209 serine carboxypeptida 93.5 1.1 2.3E-05 43.2 11.5 107 94-200 67-213 (437)
207 PLN02934 triacylglycerol lipas 93.5 0.19 4.1E-06 48.5 6.3 35 148-183 306-340 (515)
208 COG1073 Hydrolases of the alph 93.1 0.22 4.7E-06 44.0 6.0 93 94-186 48-154 (299)
209 PLN02408 phospholipase A1 92.9 0.26 5.7E-06 45.9 6.2 35 150-184 185-220 (365)
210 PLN03016 sinapoylglucose-malat 92.7 1.2 2.7E-05 42.6 10.7 106 94-199 65-210 (433)
211 PLN03037 lipase class 3 family 92.2 0.25 5.5E-06 47.8 5.3 36 148-183 299-337 (525)
212 PLN02324 triacylglycerol lipas 92.2 0.23 5E-06 46.9 4.9 34 150-183 200-234 (415)
213 PF08237 PE-PPE: PE-PPE domain 91.9 1.4 3E-05 38.4 9.1 82 122-203 2-93 (225)
214 KOG3253 Predicted alpha/beta h 91.5 0.33 7.1E-06 47.6 5.2 98 95-199 176-286 (784)
215 PLN02802 triacylglycerol lipas 91.5 0.32 6.8E-06 47.0 5.1 35 150-184 315-350 (509)
216 COG1505 Serine proteases of th 91.4 1.1 2.4E-05 44.0 8.7 199 78-302 399-613 (648)
217 PLN02753 triacylglycerol lipas 91.2 0.33 7.1E-06 47.1 4.9 35 149-183 293-331 (531)
218 PLN02761 lipase class 3 family 90.6 0.41 8.9E-06 46.4 4.9 36 148-183 273-313 (527)
219 PLN02847 triacylglycerol lipas 90.2 0.51 1.1E-05 46.5 5.2 21 164-184 251-271 (633)
220 COG4947 Uncharacterized protei 89.9 1.1 2.4E-05 37.2 6.1 35 165-199 102-136 (227)
221 TIGR03712 acc_sec_asp2 accesso 89.9 2.2 4.9E-05 41.0 9.1 101 81-185 273-378 (511)
222 PLN02719 triacylglycerol lipas 89.7 0.52 1.1E-05 45.6 4.8 35 149-183 279-317 (518)
223 PF04083 Abhydro_lipase: Parti 88.9 0.91 2E-05 31.1 4.3 38 74-111 13-59 (63)
224 PLN02213 sinapoylglucose-malat 88.3 1.8 3.9E-05 39.7 7.3 77 123-199 2-96 (319)
225 KOG4569 Predicted lipase [Lipi 87.4 0.93 2E-05 42.0 4.8 37 147-184 155-191 (336)
226 PF06441 EHN: Epoxide hydrolas 87.2 1.2 2.5E-05 34.4 4.5 34 82-115 76-112 (112)
227 COG2830 Uncharacterized protei 87.0 2.6 5.6E-05 34.6 6.4 80 96-201 12-92 (214)
228 KOG4540 Putative lipase essent 86.7 1.3 2.8E-05 39.7 5.0 35 152-186 264-298 (425)
229 COG5153 CVT17 Putative lipase 86.7 1.3 2.8E-05 39.7 5.0 35 152-186 264-298 (425)
230 PF09949 DUF2183: Uncharacteri 85.8 9.1 0.0002 28.8 8.6 87 107-194 8-97 (100)
231 KOG1282 Serine carboxypeptidas 85.4 6.9 0.00015 37.7 9.6 118 81-199 54-213 (454)
232 COG1448 TyrB Aspartate/tyrosin 83.7 6.9 0.00015 36.6 8.4 85 96-197 172-263 (396)
233 KOG2029 Uncharacterized conser 82.3 2.2 4.8E-05 41.9 4.9 54 145-198 505-571 (697)
234 KOG1551 Uncharacterized conser 80.7 1.9 4.1E-05 38.3 3.5 108 88-197 106-228 (371)
235 COG0529 CysC Adenylylsulfate k 79.7 18 0.00038 30.4 8.6 77 93-169 20-100 (197)
236 PRK12467 peptide synthase; Pro 78.2 19 0.0004 44.5 11.7 103 95-201 3692-3797(3956)
237 KOG2385 Uncharacterized conser 75.0 4.9 0.00011 39.0 4.7 41 164-204 447-492 (633)
238 KOG4388 Hormone-sensitive lipa 74.2 15 0.00033 36.3 7.8 94 95-196 396-505 (880)
239 KOG2521 Uncharacterized conser 72.9 21 0.00045 33.2 8.2 106 95-200 38-153 (350)
240 COG4553 DepA Poly-beta-hydroxy 69.5 55 0.0012 29.8 9.7 103 96-202 104-212 (415)
241 PF06792 UPF0261: Uncharacteri 68.9 51 0.0011 31.3 9.9 97 97-194 3-125 (403)
242 PF03610 EIIA-man: PTS system 68.0 51 0.0011 25.0 8.5 76 97-184 2-78 (116)
243 PF07519 Tannase: Tannase and 66.1 11 0.00024 36.6 5.2 85 114-200 52-151 (474)
244 PF06309 Torsin: Torsin; Inte 65.4 31 0.00067 27.2 6.6 58 92-159 49-115 (127)
245 PRK02399 hypothetical protein; 62.6 1E+02 0.0022 29.3 10.6 95 99-194 6-127 (406)
246 cd01714 ETF_beta The electron 62.5 44 0.00096 28.4 7.7 72 114-195 68-145 (202)
247 KOG1283 Serine carboxypeptidas 62.2 14 0.0003 33.9 4.6 104 94-199 30-166 (414)
248 PF09994 DUF2235: Uncharacteri 60.6 56 0.0012 29.3 8.4 40 145-184 72-112 (277)
249 cd00006 PTS_IIA_man PTS_IIA, P 59.4 79 0.0017 24.3 8.7 72 97-180 3-74 (122)
250 COG2240 PdxK Pyridoxal/pyridox 57.7 29 0.00062 31.2 5.8 94 101-203 11-117 (281)
251 TIGR02764 spore_ybaN_pdaB poly 52.0 14 0.0003 30.9 2.8 34 96-129 152-188 (191)
252 smart00827 PKS_AT Acyl transfe 51.8 19 0.00042 32.1 4.0 29 154-183 73-101 (298)
253 TIGR02873 spore_ylxY probable 49.7 22 0.00048 31.8 3.9 34 96-129 231-264 (268)
254 TIGR03131 malonate_mdcH malona 47.6 25 0.00055 31.5 4.0 29 154-183 67-95 (295)
255 PF00698 Acyl_transf_1: Acyl t 47.3 14 0.0003 33.7 2.3 29 154-183 75-103 (318)
256 TIGR02884 spore_pdaA delta-lac 46.5 25 0.00055 30.3 3.7 34 96-129 187-221 (224)
257 PF01583 APS_kinase: Adenylyls 45.9 69 0.0015 26.1 5.9 35 96-130 2-38 (156)
258 TIGR03709 PPK2_rel_1 polyphosp 45.2 56 0.0012 29.2 5.7 70 95-176 55-126 (264)
259 PF00448 SRP54: SRP54-type pro 44.6 1.9E+02 0.0041 24.3 9.0 76 110-195 71-148 (196)
260 COG3727 Vsr DNA G:T-mismatch r 44.5 53 0.0012 26.0 4.7 34 95-128 57-114 (150)
261 PF10081 Abhydrolase_9: Alpha/ 44.1 43 0.00094 30.1 4.7 51 150-200 93-148 (289)
262 TIGR00128 fabD malonyl CoA-acy 43.0 30 0.00066 30.7 3.8 28 155-183 74-102 (290)
263 cd03818 GT1_ExpC_like This fam 42.7 1.8E+02 0.0038 27.1 9.1 35 98-134 2-36 (396)
264 PRK05579 bifunctional phosphop 42.5 2.8E+02 0.006 26.4 10.3 74 95-171 116-196 (399)
265 KOG2872 Uroporphyrinogen decar 42.1 94 0.002 28.2 6.4 71 95-172 252-336 (359)
266 PRK12595 bifunctional 3-deoxy- 41.9 1.9E+02 0.004 27.2 8.8 75 93-174 223-299 (360)
267 COG3340 PepE Peptidase E [Amin 41.7 1.1E+02 0.0025 26.4 6.7 36 95-130 32-70 (224)
268 PHA02114 hypothetical protein 40.2 36 0.00078 25.4 3.0 34 96-129 83-116 (127)
269 PF00326 Peptidase_S9: Prolyl 39.5 66 0.0014 26.9 5.2 61 94-159 143-208 (213)
270 COG3933 Transcriptional antite 39.0 2.9E+02 0.0063 26.7 9.5 72 95-179 109-180 (470)
271 PF13439 Glyco_transf_4: Glyco 38.8 1.4E+02 0.0031 23.2 6.9 90 103-198 10-111 (177)
272 TIGR03707 PPK2_P_aer polyphosp 38.7 86 0.0019 27.4 5.7 70 95-176 30-101 (230)
273 PRK11613 folP dihydropteroate 37.8 2.1E+02 0.0046 25.8 8.3 54 111-176 165-223 (282)
274 COG4822 CbiK Cobalamin biosynt 37.0 2.7E+02 0.0059 24.2 8.2 38 95-132 138-177 (265)
275 cd07225 Pat_PNPLA6_PNPLA7 Pata 36.0 53 0.0011 30.0 4.2 63 109-185 2-64 (306)
276 PRK14457 ribosomal RNA large s 35.7 2.6E+02 0.0056 26.0 8.7 75 97-178 259-333 (345)
277 KOG1411 Aspartate aminotransfe 35.4 86 0.0019 29.2 5.3 84 97-196 199-289 (427)
278 TIGR00521 coaBC_dfp phosphopan 34.8 3.5E+02 0.0077 25.6 9.6 74 96-171 113-193 (390)
279 cd07198 Patatin Patatin-like p 34.8 61 0.0013 26.4 4.1 34 152-186 15-48 (172)
280 COG1752 RssA Predicted esteras 34.6 53 0.0012 29.7 4.0 32 153-185 29-60 (306)
281 PRK08762 molybdopterin biosynt 34.1 3.1E+02 0.0068 25.6 9.2 35 164-201 136-171 (376)
282 PRK09936 hypothetical protein; 33.8 1.5E+02 0.0033 26.8 6.5 51 107-162 36-86 (296)
283 COG0541 Ffh Signal recognition 33.8 2.3E+02 0.0051 27.3 8.1 69 117-195 177-247 (451)
284 PF03283 PAE: Pectinacetyleste 33.6 1E+02 0.0022 28.8 5.8 43 156-198 147-194 (361)
285 PF03808 Glyco_tran_WecB: Glyc 33.0 2.6E+02 0.0056 22.9 7.6 102 96-222 49-152 (172)
286 TIGR01425 SRP54_euk signal rec 32.6 4.4E+02 0.0096 25.3 9.9 71 115-195 175-247 (429)
287 PRK10279 hypothetical protein; 32.3 64 0.0014 29.3 4.1 32 153-185 23-54 (300)
288 cd07207 Pat_ExoU_VipD_like Exo 31.8 72 0.0016 26.4 4.1 32 153-185 17-48 (194)
289 PRK14974 cell division protein 31.8 3.8E+02 0.0083 24.8 9.2 69 117-195 217-287 (336)
290 PF03853 YjeF_N: YjeF-related 31.5 71 0.0015 26.2 3.9 35 94-128 24-58 (169)
291 cd04951 GT1_WbdM_like This fam 30.8 3.8E+02 0.0083 23.7 10.2 35 98-132 3-39 (360)
292 TIGR00824 EIIA-man PTS system, 30.8 2.4E+02 0.0052 21.4 8.3 74 97-182 4-77 (116)
293 cd07227 Pat_Fungal_NTE1 Fungal 30.6 75 0.0016 28.4 4.2 32 152-184 27-58 (269)
294 COG0337 AroB 3-dehydroquinate 29.5 3.6E+02 0.0079 25.3 8.5 71 96-176 34-104 (360)
295 cd03146 GAT1_Peptidase_E Type 28.9 3.3E+02 0.0071 23.1 7.8 86 93-180 29-129 (212)
296 PF14253 AbiH: Bacteriophage a 28.6 57 0.0012 28.6 3.1 18 164-181 235-252 (270)
297 cd07210 Pat_hypo_W_succinogene 28.5 97 0.0021 26.7 4.4 32 153-185 18-49 (221)
298 TIGR03586 PseI pseudaminic aci 28.4 3.7E+02 0.0081 24.8 8.4 80 93-184 132-214 (327)
299 COG1856 Uncharacterized homolo 28.0 2.5E+02 0.0053 24.7 6.5 90 113-206 101-196 (275)
300 COG1506 DAP2 Dipeptidyl aminop 28.0 2.1E+02 0.0045 28.9 7.3 61 94-159 550-615 (620)
301 PRK05282 (alpha)-aspartyl dipe 28.0 4.1E+02 0.0088 23.2 8.5 87 94-181 30-129 (233)
302 PRK14456 ribosomal RNA large s 27.9 3.5E+02 0.0077 25.4 8.3 74 98-178 283-356 (368)
303 PRK00553 ribose-phosphate pyro 27.9 4.4E+02 0.0096 24.3 8.9 20 164-183 168-188 (332)
304 KOG0781 Signal recognition par 26.6 3.2E+02 0.0069 26.9 7.6 72 102-183 445-517 (587)
305 PTZ00445 p36-lilke protein; Pr 26.5 2.3E+02 0.0051 24.5 6.2 25 108-132 28-52 (219)
306 cd07209 Pat_hypo_Ecoli_Z1214_l 26.3 98 0.0021 26.4 4.1 33 153-186 16-48 (215)
307 PRK00726 murG undecaprenyldiph 26.3 4.7E+02 0.01 23.6 8.9 35 97-131 4-38 (357)
308 TIGR02816 pfaB_fam PfaB family 26.2 75 0.0016 31.5 3.6 30 155-185 256-286 (538)
309 PF14488 DUF4434: Domain of un 26.0 2.5E+02 0.0055 23.0 6.3 58 105-162 16-79 (166)
310 PRK06731 flhF flagellar biosyn 25.9 4.8E+02 0.01 23.3 9.3 72 114-195 145-219 (270)
311 PRK13397 3-deoxy-7-phosphohept 25.4 4.8E+02 0.01 23.1 10.7 101 93-202 120-226 (250)
312 COG0218 Predicted GTPase [Gene 25.3 91 0.002 26.6 3.5 31 125-158 72-102 (200)
313 PRK13256 thiopurine S-methyltr 25.1 80 0.0017 27.5 3.2 30 97-131 45-74 (226)
314 cd07228 Pat_NTE_like_bacteria 25.0 1.1E+02 0.0024 25.0 4.0 31 155-186 20-50 (175)
315 COG3673 Uncharacterized conser 24.7 5.8E+02 0.012 23.8 9.0 93 92-184 28-142 (423)
316 PF05724 TPMT: Thiopurine S-me 24.6 1.1E+02 0.0024 26.3 4.1 30 96-130 38-67 (218)
317 PRK03092 ribose-phosphate pyro 24.1 5.5E+02 0.012 23.3 8.9 58 80-137 21-82 (304)
318 PF03976 PPK2: Polyphosphate k 23.9 35 0.00076 29.7 0.8 69 95-176 30-101 (228)
319 TIGR02260 benz_CoA_red_B benzo 23.9 6.2E+02 0.013 24.1 9.3 39 95-134 266-304 (413)
320 COG0400 Predicted esterase [Ge 23.6 3.7E+02 0.008 23.0 7.0 43 92-134 143-189 (207)
321 cd07211 Pat_PNPLA8 Patatin-lik 23.5 2E+02 0.0044 25.9 5.8 17 167-183 44-60 (308)
322 TIGR00689 rpiB_lacA_lacB sugar 23.4 3.9E+02 0.0085 21.4 7.2 72 113-196 15-86 (144)
323 TIGR01361 DAHP_synth_Bsub phos 23.2 5.3E+02 0.011 22.8 9.6 98 93-202 130-236 (260)
324 PRK06849 hypothetical protein; 23.2 5.9E+02 0.013 23.7 9.1 60 111-172 17-85 (389)
325 PRK02269 ribose-phosphate pyro 23.1 5.3E+02 0.012 23.6 8.4 78 92-170 49-130 (320)
326 PF03205 MobB: Molybdopterin g 23.1 1.6E+02 0.0034 23.3 4.4 41 97-137 1-43 (140)
327 PF08433 KTI12: Chromatin asso 23.0 1.9E+02 0.0041 25.8 5.3 38 97-134 2-41 (270)
328 TIGR00632 vsr DNA mismatch end 22.6 1.8E+02 0.004 22.5 4.4 14 115-128 100-113 (117)
329 PRK02458 ribose-phosphate pyro 22.4 5.5E+02 0.012 23.6 8.4 70 94-163 55-128 (323)
330 PF04763 DUF562: Protein of un 22.3 3.2E+02 0.0069 21.8 5.7 38 95-132 17-61 (146)
331 PF01075 Glyco_transf_9: Glyco 22.0 1.3E+02 0.0027 25.9 4.0 37 93-129 103-144 (247)
332 COG1087 GalE UDP-glucose 4-epi 21.9 3.2E+02 0.007 25.1 6.5 84 113-199 15-120 (329)
333 KOG1532 GTPase XAB1, interacts 21.6 6.3E+02 0.014 23.1 8.2 38 93-130 16-55 (366)
334 PF01012 ETF: Electron transfe 21.5 4.2E+02 0.0092 21.1 8.1 62 114-185 50-113 (164)
335 PF13207 AAA_17: AAA domain; P 21.4 1.3E+02 0.0028 22.4 3.5 61 98-160 1-64 (121)
336 cd07205 Pat_PNPLA6_PNPLA7_NTE1 21.2 1.7E+02 0.0036 23.8 4.4 32 153-185 18-49 (175)
337 TIGR03708 poly_P_AMP_trns poly 21.0 3E+02 0.0065 27.0 6.6 71 94-177 38-111 (493)
338 cd07229 Pat_TGL3_like Triacylg 20.8 1.1E+02 0.0024 29.0 3.5 37 153-190 101-137 (391)
339 PF01656 CbiA: CobQ/CobB/MinD/ 20.7 1.3E+02 0.0028 24.5 3.6 32 100-131 3-36 (195)
340 KOG2170 ATPase of the AAA+ sup 20.7 2.6E+02 0.0056 25.8 5.6 32 91-122 105-138 (344)
341 cd07230 Pat_TGL4-5_like Triacy 20.7 1E+02 0.0022 29.5 3.3 24 165-188 102-125 (421)
342 TIGR01120 rpiB ribose 5-phosph 20.2 4.6E+02 0.01 21.0 7.1 72 113-196 16-87 (143)
343 KOG1209 1-Acyl dihydroxyaceton 20.1 1.6E+02 0.0034 25.8 3.9 36 94-130 5-40 (289)
344 PLN03050 pyridoxine (pyridoxam 20.0 1.9E+02 0.004 25.5 4.6 33 97-129 62-94 (246)
345 COG0859 RfaF ADP-heptose:LPS h 20.0 1.9E+02 0.0042 26.4 5.0 35 95-129 175-215 (334)
No 1
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.90 E-value=9.9e-23 Score=182.92 Aligned_cols=126 Identities=50% Similarity=0.824 Sum_probs=108.2
Q ss_pred CCeeeEEEecCCCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcC
Q 021765 82 NGKQDTNILENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL 161 (308)
Q Consensus 82 ~~~~~~~~~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~ 161 (308)
+|.++++..+++++|+|||+||++++.+.|..++..|.++||+|+++|+||||.|........+++++++++.++++.+.
T Consensus 5 ~~~~~~~~~~~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~ 84 (273)
T PLN02211 5 NGEEVTDMKPNRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLP 84 (273)
T ss_pred cccccccccccCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcC
Confidence 56666666666778999999999999999999999999889999999999999875443344699999999999999885
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCCCCCChh
Q 021765 162 EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPF 207 (308)
Q Consensus 162 ~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~~g~~~~ 207 (308)
..++++||||||||.++..++..+|++|+++|++++..+..|.+..
T Consensus 85 ~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~ 130 (273)
T PLN02211 85 ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTD 130 (273)
T ss_pred CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHH
Confidence 3349999999999999999999999999999999988776665544
No 2
>PLN02965 Probable pheophorbidase
Probab=99.89 E-value=1.6e-22 Score=179.48 Aligned_cols=108 Identities=48% Similarity=0.888 Sum_probs=96.0
Q ss_pred eEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhH
Q 021765 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (308)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG 175 (308)
.+|||+||++.+.+.|..+++.|.+.||+|+++|+||||.|.......++++++++++.++++.++..++++++||||||
T Consensus 4 ~~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG 83 (255)
T PLN02965 4 IHFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGG 83 (255)
T ss_pred eEEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcch
Confidence 36999999999999999999999877999999999999999755444568999999999999998763489999999999
Q ss_pred HHHHHHHHhCCccccEEEEEccccCCCC
Q 021765 176 ACVSYALEHFPQKISKAIFLCATMVSDG 203 (308)
Q Consensus 176 ~~a~~~a~~~p~~v~~lVli~~~~~~~g 203 (308)
.++..++.++|++|+++|++++..+.++
T Consensus 84 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 111 (255)
T PLN02965 84 GSVTEALCKFTDKISMAIYVAAAMVKPG 111 (255)
T ss_pred HHHHHHHHhCchheeEEEEEccccCCCC
Confidence 9999999999999999999998765444
No 3
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.87 E-value=1e-20 Score=171.14 Aligned_cols=116 Identities=22% Similarity=0.294 Sum_probs=101.3
Q ss_pred CCeeeEEEecCCCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCC------CCcCCHHHHHHHHHH
Q 021765 82 NGKQDTNILENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDT------NSVTTLAEYSKPLLD 155 (308)
Q Consensus 82 ~~~~~~~~~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~~l~~ 155 (308)
++..+.+...+.++++|||+||++++...|..+++.|.+. |+|+++|+||||.|.... ...++++++++++.+
T Consensus 16 ~~~~i~y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~ 94 (294)
T PLN02824 16 KGYNIRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLND 94 (294)
T ss_pred cCeEEEEEEcCCCCCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHH
Confidence 5666666554434689999999999999999999999886 899999999999997543 134789999999999
Q ss_pred HHHHcCCCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 156 YLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 156 ~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
+++.++.+ +++|+||||||.+++.++.++|++|+++|++++..
T Consensus 95 ~l~~l~~~-~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~ 137 (294)
T PLN02824 95 FCSDVVGD-PAFVICNSVGGVVGLQAAVDAPELVRGVMLINISL 137 (294)
T ss_pred HHHHhcCC-CeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCc
Confidence 99999886 99999999999999999999999999999999864
No 4
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.86 E-value=8.3e-21 Score=170.30 Aligned_cols=116 Identities=18% Similarity=0.226 Sum_probs=100.5
Q ss_pred CCeeeEEEe-cCC-CceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHH
Q 021765 82 NGKQDTNIL-ENI-QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN 159 (308)
Q Consensus 82 ~~~~~~~~~-~~~-~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 159 (308)
++..+.+.. +.+ ++++|||+||++++...|..+++.|.+ +|+|+++|+||||.|..+. ..++++++++++.++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~~~~~~i~~ 87 (276)
T TIGR02240 10 DGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDP-DLEVIAFDVPGVGGSSTPR-HPYRFPGLAKLAARMLDY 87 (276)
T ss_pred CCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhcc-CceEEEECCCCCCCCCCCC-CcCcHHHHHHHHHHHHHH
Confidence 556666644 223 447999999999999999999999976 5999999999999997543 356899999999999999
Q ss_pred cCCCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccC
Q 021765 160 LLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 160 l~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~ 200 (308)
++.+ +++|+||||||.+++.++.++|++|+++|+++++..
T Consensus 88 l~~~-~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~ 127 (276)
T TIGR02240 88 LDYG-QVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAG 127 (276)
T ss_pred hCcC-ceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCc
Confidence 9876 999999999999999999999999999999998764
No 5
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.86 E-value=4e-20 Score=168.07 Aligned_cols=115 Identities=21% Similarity=0.188 Sum_probs=99.2
Q ss_pred eeEEEec-CCCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCC-CcCCHHHHHHHHHHHHHHcCC
Q 021765 85 QDTNILE-NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN-SVTTLAEYSKPLLDYLENLLE 162 (308)
Q Consensus 85 ~~~~~~~-~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l~~l~~ 162 (308)
++.+... ++++|+|||+||++.+...|..+++.|.+.||+|+++|+||||.|..... ..++++++++++.+++++++.
T Consensus 35 ~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~ 114 (302)
T PRK00870 35 RMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDL 114 (302)
T ss_pred EEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCC
Confidence 3444432 23478999999999999999999999988799999999999999975432 346899999999999999988
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccC
Q 021765 163 DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 163 ~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~ 200 (308)
+ +++|+||||||.++..++..+|++|.++|++++..+
T Consensus 115 ~-~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 151 (302)
T PRK00870 115 T-DVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLP 151 (302)
T ss_pred C-CEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCC
Confidence 6 999999999999999999999999999999987543
No 6
>PHA02857 monoglyceride lipase; Provisional
Probab=99.84 E-value=1e-19 Score=163.02 Aligned_cols=120 Identities=14% Similarity=0.192 Sum_probs=95.0
Q ss_pred cCCeeeEEEe--c-CCCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHH
Q 021765 81 SNGKQDTNIL--E-NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYL 157 (308)
Q Consensus 81 ~~~~~~~~~~--~-~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l 157 (308)
.+|..+.+.. . +...+.|+++||++.+...|..+++.|.++||+|+++|+||||.|........++.++++++.+.+
T Consensus 8 ~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l 87 (276)
T PHA02857 8 LDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHV 87 (276)
T ss_pred CCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHH
Confidence 3555555432 2 233456777799999999999999999999999999999999999754433457777788887777
Q ss_pred HHcC---CCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccC
Q 021765 158 ENLL---EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 158 ~~l~---~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~ 200 (308)
+.+. ...+++|+||||||.+++.++..+|+.|+++|++++...
T Consensus 88 ~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~ 133 (276)
T PHA02857 88 VTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVN 133 (276)
T ss_pred HHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccc
Confidence 6542 123899999999999999999999999999999998654
No 7
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.83 E-value=4.4e-19 Score=165.43 Aligned_cols=103 Identities=21% Similarity=0.349 Sum_probs=92.6
Q ss_pred ceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChh
Q 021765 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSG 174 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 174 (308)
+|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+....++++++++++.++++.++.+ +++|||||||
T Consensus 88 gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l~~~-~~~lvGhS~G 165 (360)
T PLN02679 88 GPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEVVQK-PTVLIGNSVG 165 (360)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHhcCC-CeEEEEECHH
Confidence 48999999999999999999999987 799999999999999765444568999999999999999886 9999999999
Q ss_pred HHHHHHHHH-hCCccccEEEEEcccc
Q 021765 175 GACVSYALE-HFPQKISKAIFLCATM 199 (308)
Q Consensus 175 G~~a~~~a~-~~p~~v~~lVli~~~~ 199 (308)
|.++..++. .+|++|+++|++++..
T Consensus 166 g~ia~~~a~~~~P~rV~~LVLi~~~~ 191 (360)
T PLN02679 166 SLACVIAASESTRDLVRGLVLLNCAG 191 (360)
T ss_pred HHHHHHHHHhcChhhcCEEEEECCcc
Confidence 999988876 5799999999999864
No 8
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.83 E-value=3.9e-19 Score=160.87 Aligned_cols=114 Identities=24% Similarity=0.275 Sum_probs=100.3
Q ss_pred CCeeeEEEecCCCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcC
Q 021765 82 NGKQDTNILENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL 161 (308)
Q Consensus 82 ~~~~~~~~~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~ 161 (308)
++..+.+... +++++|||+||++++...|..+++.|.+. |+|+++|+||||.|+.+. ..+++.++++++.++++.++
T Consensus 15 ~g~~i~y~~~-G~g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~-~~~~~~~~a~dl~~ll~~l~ 91 (295)
T PRK03592 15 LGSRMAYIET-GEGDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPD-IDYTFADHARYLDAWFDALG 91 (295)
T ss_pred CCEEEEEEEe-CCCCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhC
Confidence 5555555443 35689999999999999999999999987 599999999999998654 34689999999999999998
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 162 EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 162 ~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
.+ +++++||||||.+++.++..+|++|+++|++++..
T Consensus 92 ~~-~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 128 (295)
T PRK03592 92 LD-DVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIV 128 (295)
T ss_pred CC-CeEEEEECHHHHHHHHHHHhChhheeEEEEECCCC
Confidence 86 99999999999999999999999999999999843
No 9
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.82 E-value=7.1e-19 Score=163.27 Aligned_cols=123 Identities=16% Similarity=0.164 Sum_probs=98.5
Q ss_pred eeccCCeeeEEEe--cC--CCceEEEEeCCCCCChh-HHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHH
Q 021765 78 ESLSNGKQDTNIL--EN--IQYKKFVLIHGEGFGAW-CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKP 152 (308)
Q Consensus 78 ~~~~~~~~~~~~~--~~--~~~~~vvllHG~~~~~~-~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 152 (308)
....+|..+.+.. .. ..+++|||+||++++.. .|..+++.|.++||+|+++|+||||.|........++++++++
T Consensus 66 ~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~d 145 (349)
T PLN02385 66 EVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDD 145 (349)
T ss_pred EEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHH
Confidence 3345666665433 21 33578999999998866 4678999999889999999999999998654334588999999
Q ss_pred HHHHHHHcCCC-----CcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccC
Q 021765 153 LLDYLENLLED-----EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 153 l~~~l~~l~~~-----~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~ 200 (308)
+.++++.+... .+++|+||||||.+++.++.++|++|+++|++++...
T Consensus 146 v~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~ 198 (349)
T PLN02385 146 VIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCK 198 (349)
T ss_pred HHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccccc
Confidence 99888776431 3799999999999999999999999999999998653
No 10
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.82 E-value=6.1e-19 Score=157.98 Aligned_cols=114 Identities=19% Similarity=0.202 Sum_probs=90.4
Q ss_pred eeeEEEecCCCceEEEEeCCCCCChhHHHH---HHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHc
Q 021765 84 KQDTNILENIQYKKFVLIHGEGFGAWCWYK---TVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL 160 (308)
Q Consensus 84 ~~~~~~~~~~~~~~vvllHG~~~~~~~~~~---~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l 160 (308)
..+++.. .+++++|||+||++.+...|.. .+..|.+.||+|+++|+||||.|+...........+++++.++++.+
T Consensus 20 ~~~~y~~-~g~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l 98 (282)
T TIGR03343 20 FRIHYNE-AGNGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL 98 (282)
T ss_pred eeEEEEe-cCCCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc
Confidence 4444443 3467899999999988877754 34566677899999999999999754322112224678888999999
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 161 LEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 161 ~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
+.+ +++++||||||.+++.++.++|++|+++|++++..
T Consensus 99 ~~~-~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 136 (282)
T TIGR03343 99 DIE-KAHLVGNSMGGATALNFALEYPDRIGKLILMGPGG 136 (282)
T ss_pred CCC-CeeEEEECchHHHHHHHHHhChHhhceEEEECCCC
Confidence 887 99999999999999999999999999999998753
No 11
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.82 E-value=1.2e-18 Score=157.49 Aligned_cols=115 Identities=13% Similarity=0.147 Sum_probs=98.6
Q ss_pred CCeeeEEEecCCCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcC
Q 021765 82 NGKQDTNILENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL 161 (308)
Q Consensus 82 ~~~~~~~~~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~ 161 (308)
++..+++.. .+++++|||+||++.+...|..+++.|.+ +|+|+++|+||||.|+.+....++++++++++.+++++++
T Consensus 22 ~~~~i~y~~-~G~~~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (286)
T PRK03204 22 SRGRIHYID-EGTGPPILLCHGNPTWSFLYRDIIVALRD-RFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHLG 99 (286)
T ss_pred CCcEEEEEE-CCCCCEEEEECCCCccHHHHHHHHHHHhC-CcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHhC
Confidence 455555443 34568999999999998999999999976 5999999999999997654445688999999999999998
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 162 EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 162 ~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
.. +++++||||||.++..++..+|++|+++|++++..
T Consensus 100 ~~-~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 136 (286)
T PRK03204 100 LD-RYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWF 136 (286)
T ss_pred CC-CEEEEEECccHHHHHHHHHhChhheeEEEEECccc
Confidence 76 89999999999999999999999999999988754
No 12
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.82 E-value=8e-19 Score=156.26 Aligned_cols=117 Identities=18% Similarity=0.121 Sum_probs=100.5
Q ss_pred cCCeeeEEEecC-CCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHH
Q 021765 81 SNGKQDTNILEN-IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN 159 (308)
Q Consensus 81 ~~~~~~~~~~~~-~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 159 (308)
.++..+.+...+ .++++|||+||++++...|..+++.|.+ +|+|+++|+||||.|..+....++++++++++.++++.
T Consensus 13 ~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~ 91 (278)
T TIGR03056 13 VGPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAA 91 (278)
T ss_pred ECCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHH
Confidence 355555554433 3468999999999999999999999977 69999999999999976554457999999999999999
Q ss_pred cCCCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 160 LLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 160 l~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
++.. +++|+||||||.+++.++..+|++++++|++++..
T Consensus 92 ~~~~-~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~ 130 (278)
T TIGR03056 92 EGLS-PDGVIGHSAGAAIALRLALDGPVTPRMVVGINAAL 130 (278)
T ss_pred cCCC-CceEEEECccHHHHHHHHHhCCcccceEEEEcCcc
Confidence 8875 89999999999999999999999999999998754
No 13
>PRK10749 lysophospholipase L2; Provisional
Probab=99.81 E-value=1.8e-18 Score=159.41 Aligned_cols=120 Identities=15% Similarity=0.125 Sum_probs=98.3
Q ss_pred eccCCeeeEEEecC--CCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCC-----CcCCHHHHHH
Q 021765 79 SLSNGKQDTNILEN--IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN-----SVTTLAEYSK 151 (308)
Q Consensus 79 ~~~~~~~~~~~~~~--~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~~ 151 (308)
...+|..+.+.... ..+++|||+||++++...|..++..|.+.||+|+++|+||||.|..... ...+++++++
T Consensus 36 ~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~ 115 (330)
T PRK10749 36 TGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVD 115 (330)
T ss_pred EcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHH
Confidence 34456666655422 3457899999999988899999998988999999999999999975321 1247899999
Q ss_pred HHHHHHHHc----CCCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 152 PLLDYLENL----LEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 152 ~l~~~l~~l----~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
++..+++.+ +.. +++++||||||.++..++..+|+.|+++|++++..
T Consensus 116 d~~~~~~~~~~~~~~~-~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~ 166 (330)
T PRK10749 116 DLAAFWQQEIQPGPYR-KRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMF 166 (330)
T ss_pred HHHHHHHHHHhcCCCC-CeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchh
Confidence 999998876 333 89999999999999999999999999999998864
No 14
>PLN02578 hydrolase
Probab=99.81 E-value=1e-18 Score=162.62 Aligned_cols=114 Identities=22% Similarity=0.334 Sum_probs=98.7
Q ss_pred CCeeeEEEecCCCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcC
Q 021765 82 NGKQDTNILENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL 161 (308)
Q Consensus 82 ~~~~~~~~~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~ 161 (308)
++..+.|.. .+++++|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+. ..++..++++++.++++.+.
T Consensus 74 ~~~~i~Y~~-~g~g~~vvliHG~~~~~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~-~~~~~~~~a~~l~~~i~~~~ 150 (354)
T PLN02578 74 RGHKIHYVV-QGEGLPIVLIHGFGASAFHWRYNIPELAK-KYKVYALDLLGFGWSDKAL-IEYDAMVWRDQVADFVKEVV 150 (354)
T ss_pred CCEEEEEEE-cCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCcc-cccCHHHHHHHHHHHHHHhc
Confidence 455555554 34668899999999999999999999976 5999999999999998654 34688899999999999987
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 162 EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 162 ~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
.+ +++++|||+||.++..++.++|++|+++|++++..
T Consensus 151 ~~-~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~ 187 (354)
T PLN02578 151 KE-PAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAG 187 (354)
T ss_pred cC-CeEEEEECHHHHHHHHHHHhChHhcceEEEECCCc
Confidence 75 99999999999999999999999999999998764
No 15
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.81 E-value=4.2e-20 Score=157.67 Aligned_cols=101 Identities=29% Similarity=0.449 Sum_probs=91.9
Q ss_pred EEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCC-CcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhHH
Q 021765 98 FVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN-SVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGA 176 (308)
Q Consensus 98 vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG~ 176 (308)
|||+||++++...|..+++.|. +||+|+++|+||+|.|..... ...+++++++++.++++.++.+ +++++|||+||.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~lvG~S~Gg~ 78 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIK-KVILVGHSMGGM 78 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTS-SEEEEEETHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccccc-cccccccccccc
Confidence 7999999999999999999995 699999999999999986543 3568999999999999999986 999999999999
Q ss_pred HHHHHHHhCCccccEEEEEccccC
Q 021765 177 CVSYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 177 ~a~~~a~~~p~~v~~lVli~~~~~ 200 (308)
+++.++..+|++|+++|++++...
T Consensus 79 ~a~~~a~~~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 79 IALRLAARYPDRVKGLVLLSPPPP 102 (228)
T ss_dssp HHHHHHHHSGGGEEEEEEESESSS
T ss_pred cccccccccccccccceeeccccc
Confidence 999999999999999999998874
No 16
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.81 E-value=8.6e-19 Score=153.44 Aligned_cols=107 Identities=19% Similarity=0.276 Sum_probs=95.8
Q ss_pred CCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeC
Q 021765 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (308)
.++|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|........+++++++++.++++.++.. +++++|||
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~l~G~S 88 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIE-RFHFVGHA 88 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCC-cEEEEEec
Confidence 3468999999999999999999988876 699999999999999865555678999999999999999876 89999999
Q ss_pred hhHHHHHHHHHhCCccccEEEEEccccCC
Q 021765 173 SGGACVSYALEHFPQKISKAIFLCATMVS 201 (308)
Q Consensus 173 ~GG~~a~~~a~~~p~~v~~lVli~~~~~~ 201 (308)
|||.++..++..+|++|+++|++++....
T Consensus 89 ~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 89 LGGLIGLQLALRYPERLLSLVLINAWSRP 117 (257)
T ss_pred hhHHHHHHHHHHChHHhHHheeecCCCCC
Confidence 99999999999999999999999886543
No 17
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.81 E-value=1.5e-18 Score=159.78 Aligned_cols=120 Identities=20% Similarity=0.252 Sum_probs=95.2
Q ss_pred ccCCeeeEEEe--cC---CCceEEEEeCCCCCCh-hHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHH
Q 021765 80 LSNGKQDTNIL--EN---IQYKKFVLIHGEGFGA-WCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPL 153 (308)
Q Consensus 80 ~~~~~~~~~~~--~~---~~~~~vvllHG~~~~~-~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l 153 (308)
..+|..+.++. .. ...++|||+||++.+. +.|..+...|.++||+|+++|+||||.|........+++++++++
T Consensus 39 ~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~ 118 (330)
T PLN02298 39 SPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDC 118 (330)
T ss_pred cCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHH
Confidence 34677776543 22 2346799999998664 456677888998999999999999999975433345788889999
Q ss_pred HHHHHHcCC-----CCcEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 154 LDYLENLLE-----DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 154 ~~~l~~l~~-----~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
..+++.+.. ..+++|+||||||.+++.++..+|++|+++|++++..
T Consensus 119 ~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~ 169 (330)
T PLN02298 119 LSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMC 169 (330)
T ss_pred HHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccc
Confidence 988887643 1379999999999999999999999999999998865
No 18
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.80 E-value=1.1e-18 Score=154.67 Aligned_cols=97 Identities=25% Similarity=0.354 Sum_probs=83.0
Q ss_pred eEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhH
Q 021765 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (308)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG 175 (308)
|+|||+||++++.+.|..+++.|.+. |+|+++|+||||.|.... ..+++++++++.+ +..+ ++++|||||||
T Consensus 14 ~~ivllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~l~~----~~~~-~~~lvGhS~Gg 85 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWRCIDEELSSH-FTLHLVDLPGFGRSRGFG--ALSLADMAEAVLQ----QAPD-KAIWLGWSLGG 85 (256)
T ss_pred CeEEEECCCCCChhHHHHHHHHHhcC-CEEEEecCCCCCCCCCCC--CCCHHHHHHHHHh----cCCC-CeEEEEECHHH
Confidence 47999999999999999999999874 999999999999997532 3577777766553 4454 89999999999
Q ss_pred HHHHHHHHhCCccccEEEEEccccC
Q 021765 176 ACVSYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 176 ~~a~~~a~~~p~~v~~lVli~~~~~ 200 (308)
.++..++..+|++|+++|++++.+.
T Consensus 86 ~ia~~~a~~~p~~v~~lili~~~~~ 110 (256)
T PRK10349 86 LVASQIALTHPERVQALVTVASSPC 110 (256)
T ss_pred HHHHHHHHhChHhhheEEEecCccc
Confidence 9999999999999999999988543
No 19
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.78 E-value=7.8e-18 Score=149.97 Aligned_cols=120 Identities=21% Similarity=0.264 Sum_probs=107.5
Q ss_pred ccCCeeeEEEe-cCCCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCC-CcCCHHHHHHHHHHHH
Q 021765 80 LSNGKQDTNIL-ENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN-SVTTLAEYSKPLLDYL 157 (308)
Q Consensus 80 ~~~~~~~~~~~-~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l 157 (308)
..++..+++.. +.+++|.|+++||+......|+..+..|+.+||+|+++|+||+|.|+.+.. ..+++...+.++..++
T Consensus 28 ~~~gI~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~ll 107 (322)
T KOG4178|consen 28 TYKGIRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALL 107 (322)
T ss_pred EEccEEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHH
Confidence 33454444333 456789999999999999999999999999999999999999999998776 7789999999999999
Q ss_pred HHcCCCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccC
Q 021765 158 ENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 158 ~~l~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~ 200 (308)
+.++.. +++++||+||++++..++..+|++|+++|.++.+..
T Consensus 108 d~Lg~~-k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 108 DHLGLK-KAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP 149 (322)
T ss_pred HHhccc-eeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC
Confidence 999986 999999999999999999999999999999988776
No 20
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.78 E-value=5.9e-18 Score=146.87 Aligned_cols=104 Identities=15% Similarity=0.264 Sum_probs=92.7
Q ss_pred CceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeCh
Q 021765 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSS 173 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~ 173 (308)
++|+|||+||++.+...|..+++.|.+ ||+|+++|+||||.|.... ...++.++++++.++++.++.. +++++|||+
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~i~~~~~~-~v~liG~S~ 88 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALTP-DFRVLRYDKRGHGLSDAPE-GPYSIEDLADDVLALLDHLGIE-RAVFCGLSL 88 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhhc-ccEEEEecCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhCCC-ceEEEEeCc
Confidence 568899999999999999999998875 8999999999999986543 4568999999999999998876 899999999
Q ss_pred hHHHHHHHHHhCCccccEEEEEccccC
Q 021765 174 GGACVSYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 174 GG~~a~~~a~~~p~~v~~lVli~~~~~ 200 (308)
||.+++.++..+|++|+++|++++...
T Consensus 89 Gg~~a~~~a~~~p~~v~~li~~~~~~~ 115 (251)
T TIGR02427 89 GGLIAQGLAARRPDRVRALVLSNTAAK 115 (251)
T ss_pred hHHHHHHHHHHCHHHhHHHhhccCccc
Confidence 999999999999999999999987643
No 21
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.77 E-value=2.2e-17 Score=154.53 Aligned_cols=118 Identities=25% Similarity=0.227 Sum_probs=101.3
Q ss_pred cCCeeeEEEec-CCCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCC---CcCCHHHHHHHHHHH
Q 021765 81 SNGKQDTNILE-NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN---SVTTLAEYSKPLLDY 156 (308)
Q Consensus 81 ~~~~~~~~~~~-~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~---~~~~~~~~~~~l~~~ 156 (308)
.++..+.+... ..++++|||+||++.+...|..+++.|.+ +|+|+++|+||||.|+.+.. ..++++++++++.++
T Consensus 112 ~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~ 190 (383)
T PLN03084 112 SDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESL 190 (383)
T ss_pred CCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHH
Confidence 34455544433 33578999999999999999999999976 79999999999999986543 246899999999999
Q ss_pred HHHcCCCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccC
Q 021765 157 LENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 157 l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~ 200 (308)
+++++.+ +++|+|||+||.+++.++..+|++|.++|++++...
T Consensus 191 i~~l~~~-~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~ 233 (383)
T PLN03084 191 IDELKSD-KVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLT 233 (383)
T ss_pred HHHhCCC-CceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCc
Confidence 9999886 999999999999999999999999999999998754
No 22
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.77 E-value=8.5e-17 Score=151.37 Aligned_cols=105 Identities=23% Similarity=0.301 Sum_probs=87.9
Q ss_pred CceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCC---CCcEEEEE
Q 021765 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE---DEKVILVG 170 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~---~~~v~lvG 170 (308)
..++|||+||++++...|..+++.|.++||+|+++|++|||.|........+++.+++++.++++.+.. ..+++++|
T Consensus 135 ~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 214 (395)
T PLN02652 135 MRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFG 214 (395)
T ss_pred CceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 346899999999999999999999999999999999999999986544445778888888888877642 23799999
Q ss_pred eChhHHHHHHHHHhCC---ccccEEEEEcccc
Q 021765 171 HSSGGACVSYALEHFP---QKISKAIFLCATM 199 (308)
Q Consensus 171 hS~GG~~a~~~a~~~p---~~v~~lVli~~~~ 199 (308)
|||||.+++.++. +| ++|+++|+.+|..
T Consensus 215 hSmGG~ial~~a~-~p~~~~~v~glVL~sP~l 245 (395)
T PLN02652 215 HSTGGAVVLKAAS-YPSIEDKLEGIVLTSPAL 245 (395)
T ss_pred ECHHHHHHHHHHh-ccCcccccceEEEECccc
Confidence 9999999988775 55 3799999998864
No 23
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.76 E-value=7.1e-18 Score=147.71 Aligned_cols=100 Identities=22% Similarity=0.151 Sum_probs=89.3
Q ss_pred ceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChh
Q 021765 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSG 174 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 174 (308)
+|+|||+||++++...|..+++.| + +|+|+++|+||||.|..+. ..+++++++++.++++.++.+ +++++|||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~--~~~~~~~~~~l~~~l~~~~~~-~~~lvG~S~G 76 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAIS--VDGFADVSRLLSQTLQSYNIL-PYWLVGYSLG 76 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCcc--ccCHHHHHHHHHHHHHHcCCC-CeEEEEECHH
Confidence 578999999999999999999988 3 6999999999999997643 248999999999999999876 9999999999
Q ss_pred HHHHHHHHHhCCcc-ccEEEEEcccc
Q 021765 175 GACVSYALEHFPQK-ISKAIFLCATM 199 (308)
Q Consensus 175 G~~a~~~a~~~p~~-v~~lVli~~~~ 199 (308)
|.+++.++.++|+. |+++|++++..
T Consensus 77 g~va~~~a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 77 GRIAMYYACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred HHHHHHHHHhCCcccccEEEEeCCCC
Confidence 99999999998664 99999987664
No 24
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.76 E-value=2.6e-17 Score=149.33 Aligned_cols=108 Identities=28% Similarity=0.427 Sum_probs=96.4
Q ss_pred eEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCC-CCCCCcCCHHHHHHHHHHHHHHcCC---CCcEEEEEe
Q 021765 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDL-SDTNSVTTLAEYSKPLLDYLENLLE---DEKVILVGH 171 (308)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~-~~~~~~~~~~~~~~~l~~~l~~l~~---~~~v~lvGh 171 (308)
.+||++||++.+..-|..++..|..+||.|+++|+||||.|. +......++.++..++..+++.... +.+++++||
T Consensus 35 g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gH 114 (298)
T COG2267 35 GVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGH 114 (298)
T ss_pred cEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEe
Confidence 689999999999999999999999999999999999999997 5555556789999999998887752 469999999
Q ss_pred ChhHHHHHHHHHhCCccccEEEEEccccCCCC
Q 021765 172 SSGGACVSYALEHFPQKISKAIFLCATMVSDG 203 (308)
Q Consensus 172 S~GG~~a~~~a~~~p~~v~~lVli~~~~~~~g 203 (308)
||||.+++.++..++.+|+++|+.+|.....+
T Consensus 115 SmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~ 146 (298)
T COG2267 115 SMGGLIALLYLARYPPRIDGLVLSSPALGLGG 146 (298)
T ss_pred CcHHHHHHHHHHhCCccccEEEEECccccCCh
Confidence 99999999999999999999999999875553
No 25
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.76 E-value=4.3e-17 Score=144.72 Aligned_cols=105 Identities=24% Similarity=0.204 Sum_probs=88.7
Q ss_pred CceEEEEeCCCCCChh-HHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCC--cCCHHHHHHHHHHHHHHcCCCCcEEEEE
Q 021765 94 QYKKFVLIHGEGFGAW-CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNS--VTTLAEYSKPLLDYLENLLEDEKVILVG 170 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~-~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~--~~~~~~~~~~l~~~l~~l~~~~~v~lvG 170 (308)
.+++|||+||++++.. .|..+...|.+.||+|+++|+||+|.|...... ..+++++++++.++++.++.. +++++|
T Consensus 24 ~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~liG 102 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKLGLD-KFYLLG 102 (288)
T ss_pred CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence 3689999999865554 556666677766999999999999998754333 368999999999999998876 899999
Q ss_pred eChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 171 HSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 171 hS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
|||||.++..++..+|++|.++|++++..
T Consensus 103 ~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 103 HSWGGMLAQEYALKYGQHLKGLIISSMLD 131 (288)
T ss_pred eehHHHHHHHHHHhCccccceeeEecccc
Confidence 99999999999999999999999998764
No 26
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.75 E-value=1.3e-17 Score=147.03 Aligned_cols=104 Identities=24% Similarity=0.264 Sum_probs=93.7
Q ss_pred CCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeC
Q 021765 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (308)
.++|+|||+||++++...|..++..|.+ +|+|+++|+||||.|.... ..+++++++++.++++.++.+ +++|+|||
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~--~~~~~~~~~d~~~~l~~l~~~-~~~lvGhS 89 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLVN-DHDIIQVDMRNHGLSPRDP--VMNYPAMAQDLLDTLDALQIE-KATFIGHS 89 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHhh-CCeEEEECCCCCCCCCCCC--CCCHHHHHHHHHHHHHHcCCC-ceEEEEEC
Confidence 4678999999999999999999999976 6999999999999987543 468999999999999999876 89999999
Q ss_pred hhHHHHHHHHHhCCccccEEEEEccccC
Q 021765 173 SGGACVSYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 173 ~GG~~a~~~a~~~p~~v~~lVli~~~~~ 200 (308)
|||.+++.++..+|++|+++|++++.+.
T Consensus 90 ~Gg~va~~~a~~~~~~v~~lvli~~~~~ 117 (255)
T PRK10673 90 MGGKAVMALTALAPDRIDKLVAIDIAPV 117 (255)
T ss_pred HHHHHHHHHHHhCHhhcceEEEEecCCC
Confidence 9999999999999999999999986543
No 27
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.75 E-value=1.6e-17 Score=143.64 Aligned_cols=103 Identities=23% Similarity=0.291 Sum_probs=90.3
Q ss_pred ceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCC-CcCCHHHHHHH-HHHHHHHcCCCCcEEEEEeC
Q 021765 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN-SVTTLAEYSKP-LLDYLENLLEDEKVILVGHS 172 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~-l~~~l~~l~~~~~v~lvGhS 172 (308)
+|+|||+||++++...|..+++.|. .||+|+++|+||+|.|..+.. ...++.+.+++ +..+++.++.+ +++++|||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~G~S 78 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIE-PFFLVGYS 78 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCC-eEEEEEec
Confidence 3789999999999999999999998 689999999999999975433 44678888888 67777777765 89999999
Q ss_pred hhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 173 SGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 173 ~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
+||.++..++.++|+.|.++|++++..
T Consensus 79 ~Gg~ia~~~a~~~~~~v~~lil~~~~~ 105 (251)
T TIGR03695 79 MGGRIALYYALQYPERVQGLILESGSP 105 (251)
T ss_pred cHHHHHHHHHHhCchheeeeEEecCCC
Confidence 999999999999999999999998764
No 28
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.75 E-value=1.7e-17 Score=143.59 Aligned_cols=98 Identities=21% Similarity=0.269 Sum_probs=83.4
Q ss_pred ceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChh
Q 021765 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSG 174 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 174 (308)
.|+|||+||++++...|..+++.|.+ +|+|+++|+||+|.|... ...++.++++++.+.+ .+ +++++|||||
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~--~~~~~~~~~~~~~~~~----~~-~~~lvG~S~G 75 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGF--GPLSLADAAEAIAAQA----PD-PAIWLGWSLG 75 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCC--CCcCHHHHHHHHHHhC----CC-CeEEEEEcHH
Confidence 37999999999999999999999976 699999999999998653 2357777777665543 23 8999999999
Q ss_pred HHHHHHHHHhCCccccEEEEEccccC
Q 021765 175 GACVSYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 175 G~~a~~~a~~~p~~v~~lVli~~~~~ 200 (308)
|.+++.++.++|++|.++|++++.+.
T Consensus 76 g~~a~~~a~~~p~~v~~~il~~~~~~ 101 (245)
T TIGR01738 76 GLVALHIAATHPDRVRALVTVASSPC 101 (245)
T ss_pred HHHHHHHHHHCHHhhheeeEecCCcc
Confidence 99999999999999999999988653
No 29
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.74 E-value=1.8e-16 Score=147.67 Aligned_cols=114 Identities=28% Similarity=0.372 Sum_probs=96.9
Q ss_pred CeeeEEEe-cCCCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcC
Q 021765 83 GKQDTNIL-ENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL 161 (308)
Q Consensus 83 ~~~~~~~~-~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~ 161 (308)
+..+.++. +.+++++|||+||++++...|..+.+.|.+ +|+|+++|+||||.|.... ...++.++++++.++++.++
T Consensus 118 ~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~~~~~~ 195 (371)
T PRK14875 118 GRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAA-GRPVIALDLPGHGASSKAV-GAGSLDELAAAVLAFLDALG 195 (371)
T ss_pred CcEEEEecccCCCCCeEEEECCCCCccchHHHHHHHHhc-CCEEEEEcCCCCCCCCCCC-CCCCHHHHHHHHHHHHHhcC
Confidence 33444443 334578999999999999999999999987 5999999999999986433 34689999999999999988
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 162 EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 162 ~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
.. +++++|||+||.+++.++..+|+++.++|++++..
T Consensus 196 ~~-~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~ 232 (371)
T PRK14875 196 IE-RAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAG 232 (371)
T ss_pred Cc-cEEEEeechHHHHHHHHHHhCchheeEEEEECcCC
Confidence 76 89999999999999999999999999999998764
No 30
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.73 E-value=4.3e-17 Score=145.83 Aligned_cols=119 Identities=26% Similarity=0.350 Sum_probs=101.2
Q ss_pred CCeeeEEEe---cCCCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCC---CcCCHHHHHHHHHH
Q 021765 82 NGKQDTNIL---ENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN---SVTTLAEYSKPLLD 155 (308)
Q Consensus 82 ~~~~~~~~~---~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~---~~~~~~~~~~~l~~ 155 (308)
++..++... +..+++++||+||+|.+...|..-.+.|++ .++|+++|++|+|.|+.+.- .......+++.+.+
T Consensus 74 ~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~ 152 (365)
T KOG4409|consen 74 NGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQ 152 (365)
T ss_pred CCceeEEEeecccccCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHH
Confidence 444444332 345678999999999999999999999988 69999999999999987543 33355678999999
Q ss_pred HHHHcCCCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCCC
Q 021765 156 YLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSD 202 (308)
Q Consensus 156 ~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~~ 202 (308)
+-...+++ +.+|+|||+||+++..+|.+||++|.++||++|....+
T Consensus 153 WR~~~~L~-KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 153 WRKKMGLE-KMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPE 198 (365)
T ss_pred HHHHcCCc-ceeEeeccchHHHHHHHHHhChHhhceEEEeccccccc
Confidence 99999998 99999999999999999999999999999999988765
No 31
>PRK06489 hypothetical protein; Provisional
Probab=99.73 E-value=3.6e-17 Score=152.48 Aligned_cols=104 Identities=14% Similarity=0.184 Sum_probs=86.2
Q ss_pred ceEEEEeCCCCCChhHHH--HHHHHH-------HHCCCeEEEeCCCCCCCCCCCCCC------cCCHHHHHHHHHHHH-H
Q 021765 95 YKKFVLIHGEGFGAWCWY--KTVASL-------EEVGLIPTALDLKGSGIDLSDTNS------VTTLAEYSKPLLDYL-E 158 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~~~--~~~~~L-------~~~G~~vi~~D~~G~G~S~~~~~~------~~~~~~~~~~l~~~l-~ 158 (308)
+|+|||+||++++...|. .+.+.| ..++|+|+++|+||||.|+.+... .++++++++++..++ +
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~ 148 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE 148 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH
Confidence 689999999999988886 555554 134799999999999999754321 368899998888755 7
Q ss_pred HcCCCCcEE-EEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 159 NLLEDEKVI-LVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 159 ~l~~~~~v~-lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
+++.+ +++ |+||||||.+++.++.++|++|+++|++++..
T Consensus 149 ~lgi~-~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~ 189 (360)
T PRK06489 149 GLGVK-HLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQP 189 (360)
T ss_pred hcCCC-ceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCc
Confidence 78876 774 89999999999999999999999999998764
No 32
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.73 E-value=7.1e-17 Score=154.44 Aligned_cols=117 Identities=18% Similarity=0.162 Sum_probs=96.3
Q ss_pred CCeeeEEEecCC----CceEEEEeCCCCCChhHHHH-HHHHHH---HCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHH
Q 021765 82 NGKQDTNILENI----QYKKFVLIHGEGFGAWCWYK-TVASLE---EVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPL 153 (308)
Q Consensus 82 ~~~~~~~~~~~~----~~~~vvllHG~~~~~~~~~~-~~~~L~---~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l 153 (308)
++..+++....+ .+++|||+||++++...|.. +++.|. +.+|+|+++|+||||.|+.+....++++++++++
T Consensus 184 ~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l 263 (481)
T PLN03087 184 SNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMI 263 (481)
T ss_pred CCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHH
Confidence 445555554332 24799999999999999985 446665 3689999999999999986544557899999998
Q ss_pred H-HHHHHcCCCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 154 L-DYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 154 ~-~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
. .+++.++.+ +++++||||||.+++.++.++|++|+++|+++++.
T Consensus 264 ~~~ll~~lg~~-k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~ 309 (481)
T PLN03087 264 ERSVLERYKVK-SFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPY 309 (481)
T ss_pred HHHHHHHcCCC-CEEEEEECHHHHHHHHHHHhChHhccEEEEECCCc
Confidence 4 788988886 99999999999999999999999999999998754
No 33
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.73 E-value=1.7e-16 Score=139.54 Aligned_cols=107 Identities=21% Similarity=0.282 Sum_probs=94.3
Q ss_pred eEEEEeCCCCCCh-hHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcC-----CCCcEEEE
Q 021765 96 KKFVLIHGEGFGA-WCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL-----EDEKVILV 169 (308)
Q Consensus 96 ~~vvllHG~~~~~-~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~-----~~~~v~lv 169 (308)
-.|+++||++... +.|..++..|+..||.|+++|++|||.|++......+++..++++.++++... .+.+..++
T Consensus 55 ~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~ 134 (313)
T KOG1455|consen 55 GLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLF 134 (313)
T ss_pred eEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeee
Confidence 4799999999876 67888999999999999999999999999877777899999999999888642 22479999
Q ss_pred EeChhHHHHHHHHHhCCccccEEEEEccccCCC
Q 021765 170 GHSSGGACVSYALEHFPQKISKAIFLCATMVSD 202 (308)
Q Consensus 170 GhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~~ 202 (308)
||||||.+++.++.+.|+..+++|+++|.....
T Consensus 135 GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~ 167 (313)
T KOG1455|consen 135 GESMGGAVALLIALKDPNFWDGAILVAPMCKIS 167 (313)
T ss_pred ecCcchHHHHHHHhhCCcccccceeeecccccC
Confidence 999999999999999999999999999877544
No 34
>PRK13604 luxD acyl transferase; Provisional
Probab=99.72 E-value=6e-16 Score=139.08 Aligned_cols=194 Identities=13% Similarity=0.106 Sum_probs=118.9
Q ss_pred eeccCCeeeEEEecC------CCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCC-CCCCCCCC--CcCCHHH
Q 021765 78 ESLSNGKQDTNILEN------IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGS-GIDLSDTN--SVTTLAE 148 (308)
Q Consensus 78 ~~~~~~~~~~~~~~~------~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~-G~S~~~~~--~~~~~~~ 148 (308)
....+|..+.-++.. ...++||++||++.....+..+++.|.++||.|+.+|.+|+ |.|.+... .......
T Consensus 14 ~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~ 93 (307)
T PRK13604 14 ICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIGKN 93 (307)
T ss_pred EEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcccccHH
Confidence 334456665544322 22368999999999887788999999999999999999987 88876442 1112234
Q ss_pred HHHHHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCCCCCChhhhhHhhhcchHHHHHHHHHHH
Q 021765 149 YSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLI 228 (308)
Q Consensus 149 ~~~~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l 228 (308)
++..+.++++..... ++.|+||||||.++..+|... .++++|+.+|+... .+.+...+... + .
T Consensus 94 Dl~aaid~lk~~~~~-~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l-----~d~l~~~~~~~--~-------~ 156 (307)
T PRK13604 94 SLLTVVDWLNTRGIN-NLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNL-----RDTLERALGYD--Y-------L 156 (307)
T ss_pred HHHHHHHHHHhcCCC-ceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccH-----HHHHHHhhhcc--c-------c
Confidence 455556666665544 899999999999987766643 49999999888532 22222211100 0 0
Q ss_pred hcCCCCCCCc-----cccc-CHHHHHHHhcCCCc---hhhhhcccCCCCCccchhhhcccccccchhhchHHH
Q 021765 229 YGNGKDKPPT-----GFMF-EKQQMKGLYFNQSP---SKVWYSSSLSFPIKQFLWFYQFAESLTSAYVSWKHF 292 (308)
Q Consensus 229 ~~~~~~~~~~-----~~~~-~~~~l~~~~~~~~~---~~~~~l~~~~~p~~~~l~i~G~~D~~vp~~~~~~~~ 292 (308)
..+....+. ...+ ...+++..+..+.. +.......+..| +|+|||..|.+||...+.+-+
T Consensus 157 -~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~P---vLiIHG~~D~lVp~~~s~~l~ 225 (307)
T PRK13604 157 -SLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIP---FIAFTANNDSWVKQSEVIDLL 225 (307)
T ss_pred -cCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCC---EEEEEcCCCCccCHHHHHHHH
Confidence 000000000 0111 13444443322221 112234445677 999999999999998887543
No 35
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.70 E-value=1.6e-15 Score=143.75 Aligned_cols=126 Identities=13% Similarity=0.121 Sum_probs=92.3
Q ss_pred ceEEEeeccCCeeeEEE--ec--CCCceEEEEeCCCCCCh-hHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHH
Q 021765 73 RRTLSESLSNGKQDTNI--LE--NIQYKKFVLIHGEGFGA-WCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLA 147 (308)
Q Consensus 73 ~~~~~~~~~~~~~~~~~--~~--~~~~~~vvllHG~~~~~-~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~ 147 (308)
.+++..+..++..+..+ .. ++..|+||++||+++.. +.|..+++.|.++||+|+++|+||+|.|..... ..+..
T Consensus 168 ~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~-~~d~~ 246 (414)
T PRK05077 168 LKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKL-TQDSS 246 (414)
T ss_pred eEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCc-cccHH
Confidence 45677777777444422 22 23346677666766654 568888899999999999999999999865321 22444
Q ss_pred HHHHHHHHHHHHcC--CCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 148 EYSKPLLDYLENLL--EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 148 ~~~~~l~~~l~~l~--~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
.....+.+++.... ..+++.++||||||.+++.++..+|++|+++|+++++.
T Consensus 247 ~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~ 300 (414)
T PRK05077 247 LLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVV 300 (414)
T ss_pred HHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCcc
Confidence 45566667776653 12489999999999999999998899999999998875
No 36
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.70 E-value=2.6e-16 Score=144.34 Aligned_cols=106 Identities=26% Similarity=0.466 Sum_probs=92.8
Q ss_pred CceEEEEeCCCCCChhHHHHHHHHHHHC-CCeEEEeCCCCCCC-CCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEe
Q 021765 94 QYKKFVLIHGEGFGAWCWYKTVASLEEV-GLIPTALDLKGSGI-DLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGH 171 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~G~-S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 171 (308)
++++||++|||+++...|+.++..|.+. |+.|+++|++|+|. |..+....++..+++..+..++...... +++++||
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~-~~~lvgh 135 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVE-PVSLVGH 135 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCc-ceEEEEe
Confidence 6899999999999999999999988765 49999999999994 4555556689999999999999888876 7999999
Q ss_pred ChhHHHHHHHHHhCCccccEEE---EEccccC
Q 021765 172 SSGGACVSYALEHFPQKISKAI---FLCATMV 200 (308)
Q Consensus 172 S~GG~~a~~~a~~~p~~v~~lV---li~~~~~ 200 (308)
|+||.++..+|+.+|+.|+++| ++++...
T Consensus 136 S~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~ 167 (326)
T KOG1454|consen 136 SLGGIVALKAAAYYPETVDSLVLLDLLGPPVY 167 (326)
T ss_pred CcHHHHHHHHHHhCcccccceeeecccccccc
Confidence 9999999999999999999999 5555443
No 37
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.69 E-value=1.3e-16 Score=134.05 Aligned_cols=102 Identities=25% Similarity=0.231 Sum_probs=87.9
Q ss_pred ceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcC---CCCcEEEEEe
Q 021765 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL---EDEKVILVGH 171 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~---~~~~v~lvGh 171 (308)
+..|+|+||+.++....+.+.++|.++||+|.++.+||||...... -..+..+|.+++.+..+.+. .+ .|.++|.
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~f-l~t~~~DW~~~v~d~Y~~L~~~gy~-eI~v~Gl 92 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDF-LKTTPRDWWEDVEDGYRDLKEAGYD-EIAVVGL 92 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHH-hcCCHHHHHHHHHHHHHHHHHcCCC-eEEEEee
Confidence 3899999999999999999999999999999999999999754322 23477888887777666653 44 8999999
Q ss_pred ChhHHHHHHHHHhCCccccEEEEEccccC
Q 021765 172 SSGGACVSYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 172 S~GG~~a~~~a~~~p~~v~~lVli~~~~~ 200 (308)
||||.+++.+|..+| ++++|.+|++.-
T Consensus 93 SmGGv~alkla~~~p--~K~iv~m~a~~~ 119 (243)
T COG1647 93 SMGGVFALKLAYHYP--PKKIVPMCAPVN 119 (243)
T ss_pred cchhHHHHHHHhhCC--ccceeeecCCcc
Confidence 999999999999998 999999998875
No 38
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.69 E-value=9.2e-17 Score=148.78 Aligned_cols=116 Identities=16% Similarity=0.116 Sum_probs=89.8
Q ss_pred CCeeeEEEecCCCceEEEEeCCCCCChh------------HHHHHHH---HHHHCCCeEEEeCCCCCCCCCCCCCCcCCH
Q 021765 82 NGKQDTNILENIQYKKFVLIHGEGFGAW------------CWYKTVA---SLEEVGLIPTALDLKGSGIDLSDTNSVTTL 146 (308)
Q Consensus 82 ~~~~~~~~~~~~~~~~vvllHG~~~~~~------------~~~~~~~---~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~ 146 (308)
++..+.|...+..++++||+||++++.. .|..++. .|...+|+|+++|+||||.|.. ..+++
T Consensus 44 ~~~~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~---~~~~~ 120 (343)
T PRK08775 44 EDLRLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD---VPIDT 120 (343)
T ss_pred CCceEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC---CCCCH
Confidence 3455555544433446777766666554 6887876 5643469999999999997742 23578
Q ss_pred HHHHHHHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccC
Q 021765 147 AEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~ 200 (308)
.++++++.++++.++.++.++|+||||||++++.++.++|++|.++|++++...
T Consensus 121 ~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~ 174 (343)
T PRK08775 121 ADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHR 174 (343)
T ss_pred HHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECcccc
Confidence 899999999999999863458999999999999999999999999999998653
No 39
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.68 E-value=1.5e-15 Score=135.21 Aligned_cols=103 Identities=13% Similarity=0.051 Sum_probs=83.7
Q ss_pred ceEEEEeCCCCCC----hhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHH---HHHcCCCCcEE
Q 021765 95 YKKFVLIHGEGFG----AWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDY---LENLLEDEKVI 167 (308)
Q Consensus 95 ~~~vvllHG~~~~----~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~---l~~l~~~~~v~ 167 (308)
.++|||+||++.. ...|..+++.|.++||+|+++|+||||.|.+... ..++..+++++... ++..+.. +++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~-~~~~~~~~~Dv~~ai~~L~~~~~~-~v~ 102 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFA-AARWDVWKEDVAAAYRWLIEQGHP-PVT 102 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccc-cCCHHHHHHHHHHHHHHHHhcCCC-CEE
Confidence 4689999999864 3467778899999999999999999999876443 34666776766554 4444444 899
Q ss_pred EEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 168 LVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 168 lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
|+||||||.++..++.++|++++++|+++|..
T Consensus 103 LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 103 LWGLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred EEEECHHHHHHHHHHHhCccccceEEEecccc
Confidence 99999999999999999999999999998764
No 40
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.68 E-value=4.5e-15 Score=140.33 Aligned_cols=108 Identities=19% Similarity=0.258 Sum_probs=88.8
Q ss_pred CCCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCH----HHHHHHHHHHHHHcCCCCcEE
Q 021765 92 NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTL----AEYSKPLLDYLENLLEDEKVI 167 (308)
Q Consensus 92 ~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~----~~~~~~l~~~l~~l~~~~~v~ 167 (308)
.+++|+|||+||++.+...|...++.|.+ +|+|+++|++|||.|..+.....+. ..+++++.++++.++.. +++
T Consensus 102 ~~~~p~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~-~~~ 179 (402)
T PLN02894 102 KEDAPTLVMVHGYGASQGFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLS-NFI 179 (402)
T ss_pred CCCCCEEEEECCCCcchhHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCC-CeE
Confidence 45678999999999999999888888987 5999999999999997543221121 23466777888888776 999
Q ss_pred EEEeChhHHHHHHHHHhCCccccEEEEEccccCC
Q 021765 168 LVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (308)
Q Consensus 168 lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~ 201 (308)
|+||||||.+++.++.++|++|+++|++++....
T Consensus 180 lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~ 213 (402)
T PLN02894 180 LLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFS 213 (402)
T ss_pred EEEECHHHHHHHHHHHhCchhhcEEEEECCcccc
Confidence 9999999999999999999999999999886543
No 41
>PRK05855 short chain dehydrogenase; Validated
Probab=99.67 E-value=1.8e-15 Score=149.01 Aligned_cols=116 Identities=19% Similarity=0.195 Sum_probs=92.0
Q ss_pred cCCeeeEEEe-cCCCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCC-CcCCHHHHHHHHHHHHH
Q 021765 81 SNGKQDTNIL-ENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN-SVTTLAEYSKPLLDYLE 158 (308)
Q Consensus 81 ~~~~~~~~~~-~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l~ 158 (308)
.++..+.++. ++.++|+|||+||++++...|..+++.|. .||+|+++|+||||.|..... ..++++++++++.++++
T Consensus 10 ~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~ 88 (582)
T PRK05855 10 SDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLA-DRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVID 88 (582)
T ss_pred eCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhh-cceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHH
Confidence 3566666554 33457899999999999999999999995 589999999999999975432 35689999999999999
Q ss_pred HcCCCCcEEEEEeChhHHHHHHHHHh--CCccccEEEEEcc
Q 021765 159 NLLEDEKVILVGHSSGGACVSYALEH--FPQKISKAIFLCA 197 (308)
Q Consensus 159 ~l~~~~~v~lvGhS~GG~~a~~~a~~--~p~~v~~lVli~~ 197 (308)
.++...+++|+||||||.+++.++.. .++++..++.+++
T Consensus 89 ~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~ 129 (582)
T PRK05855 89 AVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSG 129 (582)
T ss_pred HhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccC
Confidence 99876469999999999999887765 2344555554443
No 42
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.66 E-value=1.2e-15 Score=139.05 Aligned_cols=120 Identities=13% Similarity=0.058 Sum_probs=94.0
Q ss_pred ccCCeeeEEEecC-CCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCC-CcCCHHHHHHHHHHHH
Q 021765 80 LSNGKQDTNILEN-IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN-SVTTLAEYSKPLLDYL 157 (308)
Q Consensus 80 ~~~~~~~~~~~~~-~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l 157 (308)
..++..+.+...+ .++++|||+||+.++...+ .+...+...+|+|+++|+||||.|..... ...+..+.++++..++
T Consensus 11 ~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~ 89 (306)
T TIGR01249 11 VSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLR 89 (306)
T ss_pred cCCCcEEEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHH
Confidence 3345666654433 3467899999987765543 34445545689999999999999975432 2357788899999999
Q ss_pred HHcCCCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCC
Q 021765 158 ENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (308)
Q Consensus 158 ~~l~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~ 201 (308)
+.++.. +++++||||||.+++.++.++|++|+++|+++++...
T Consensus 90 ~~l~~~-~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~ 132 (306)
T TIGR01249 90 EKLGIK-NWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLR 132 (306)
T ss_pred HHcCCC-CEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCC
Confidence 998876 8999999999999999999999999999999887543
No 43
>PLN02511 hydrolase
Probab=99.64 E-value=1.4e-15 Score=143.21 Aligned_cols=106 Identities=15% Similarity=0.193 Sum_probs=78.1
Q ss_pred CCceEEEEeCCCCCChh-HH-HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCC---CCcEE
Q 021765 93 IQYKKFVLIHGEGFGAW-CW-YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE---DEKVI 167 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~-~~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~---~~~v~ 167 (308)
.++|+||++||++++.. .| ..++..+.++||+|+++|+||||.|....... ....+.+++.++++.+.. ..+++
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~-~~~~~~~Dl~~~i~~l~~~~~~~~~~ 176 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQF-YSASFTGDLRQVVDHVAGRYPSANLY 176 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCE-EcCCchHHHHHHHHHHHHHCCCCCEE
Confidence 35689999999977654 34 46777777889999999999999987532221 123344455555555432 23899
Q ss_pred EEEeChhHHHHHHHHHhCCcc--ccEEEEEcccc
Q 021765 168 LVGHSSGGACVSYALEHFPQK--ISKAIFLCATM 199 (308)
Q Consensus 168 lvGhS~GG~~a~~~a~~~p~~--v~~lVli~~~~ 199 (308)
++||||||.+++.++.+++++ |.++|+++++.
T Consensus 177 lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~ 210 (388)
T PLN02511 177 AAGWSLGANILVNYLGEEGENCPLSGAVSLCNPF 210 (388)
T ss_pred EEEechhHHHHHHHHHhcCCCCCceEEEEECCCc
Confidence 999999999999999999887 88888887654
No 44
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.64 E-value=4.6e-15 Score=160.59 Aligned_cols=104 Identities=20% Similarity=0.269 Sum_probs=92.2
Q ss_pred CceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCC-------CCcCCHHHHHHHHHHHHHHcCCCCcE
Q 021765 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDT-------NSVTTLAEYSKPLLDYLENLLEDEKV 166 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~l~~~l~~l~~~~~v 166 (308)
++++|||+||++++...|..+++.|.+ +|+|+++|+||||.|.... ....++++.++++..++++++.+ ++
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~-~v 1447 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPG-KV 1447 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCC-CE
Confidence 368999999999999999999999976 5999999999999986432 12457889999999999998876 99
Q ss_pred EEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 167 ILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 167 ~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
+|+||||||.+++.++.++|++|+++|++++.+
T Consensus 1448 ~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p 1480 (1655)
T PLN02980 1448 TLVGYSMGARIALYMALRFSDKIEGAVIISGSP 1480 (1655)
T ss_pred EEEEECHHHHHHHHHHHhChHhhCEEEEECCCC
Confidence 999999999999999999999999999998754
No 45
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.64 E-value=2.6e-15 Score=138.49 Aligned_cols=118 Identities=19% Similarity=0.247 Sum_probs=88.4
Q ss_pred CCeeeEEEe--cCCCceEEEEeCCCCCChh-HH-------------------------HHHHHHHHHCCCeEEEeCCCCC
Q 021765 82 NGKQDTNIL--ENIQYKKFVLIHGEGFGAW-CW-------------------------YKTVASLEEVGLIPTALDLKGS 133 (308)
Q Consensus 82 ~~~~~~~~~--~~~~~~~vvllHG~~~~~~-~~-------------------------~~~~~~L~~~G~~vi~~D~~G~ 133 (308)
+|..+.++. ....+.+||++||++.+.. .+ ..+++.|.++||.|+++|+|||
T Consensus 6 ~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGH 85 (332)
T TIGR01607 6 DGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGH 85 (332)
T ss_pred CCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEeccccc
Confidence 444454333 2234569999999998875 21 3679999999999999999999
Q ss_pred CCCCCCCC---CcCCHHHHHHHHHHHHHHcCC-----------------------CCcEEEEEeChhHHHHHHHHHhCCc
Q 021765 134 GIDLSDTN---SVTTLAEYSKPLLDYLENLLE-----------------------DEKVILVGHSSGGACVSYALEHFPQ 187 (308)
Q Consensus 134 G~S~~~~~---~~~~~~~~~~~l~~~l~~l~~-----------------------~~~v~lvGhS~GG~~a~~~a~~~p~ 187 (308)
|.|.+... ...+++++++++.++++.... +.+++|+||||||.++..+++.+++
T Consensus 86 G~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~ 165 (332)
T TIGR01607 86 GESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGK 165 (332)
T ss_pred CCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhcc
Confidence 99875421 224788899999888876421 3479999999999999998876542
Q ss_pred --------cccEEEEEcccc
Q 021765 188 --------KISKAIFLCATM 199 (308)
Q Consensus 188 --------~v~~lVli~~~~ 199 (308)
.++++|+++|..
T Consensus 166 ~~~~~~~~~i~g~i~~s~~~ 185 (332)
T TIGR01607 166 SNENNDKLNIKGCISLSGMI 185 (332)
T ss_pred ccccccccccceEEEeccce
Confidence 589999888764
No 46
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.63 E-value=1.7e-15 Score=140.73 Aligned_cols=119 Identities=13% Similarity=0.146 Sum_probs=92.6
Q ss_pred CCeeeEEEecC----CCceEEEEeCCCCCChh-----------HHHHHH---HHHHHCCCeEEEeCCCC--CCCCCCC--
Q 021765 82 NGKQDTNILEN----IQYKKFVLIHGEGFGAW-----------CWYKTV---ASLEEVGLIPTALDLKG--SGIDLSD-- 139 (308)
Q Consensus 82 ~~~~~~~~~~~----~~~~~vvllHG~~~~~~-----------~~~~~~---~~L~~~G~~vi~~D~~G--~G~S~~~-- 139 (308)
++..+.|...+ .++++|||+||++++.. .|..++ ..|...+|+|+++|+|| +|.|...
T Consensus 14 ~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~ 93 (351)
T TIGR01392 14 SDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSI 93 (351)
T ss_pred CCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCC
Confidence 34455554432 23579999999999763 377775 25555689999999999 5554321
Q ss_pred -C--------CCcCCHHHHHHHHHHHHHHcCCCCc-EEEEEeChhHHHHHHHHHhCCccccEEEEEccccCC
Q 021765 140 -T--------NSVTTLAEYSKPLLDYLENLLEDEK-VILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (308)
Q Consensus 140 -~--------~~~~~~~~~~~~l~~~l~~l~~~~~-v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~ 201 (308)
+ ...++++++++++.+++++++.+ + ++|+||||||++++.++..+|++|+++|++++....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 164 (351)
T TIGR01392 94 NPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIE-QIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARH 164 (351)
T ss_pred CCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCC-CceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcC
Confidence 0 12468999999999999999987 7 999999999999999999999999999999987643
No 47
>PRK07581 hypothetical protein; Validated
Probab=99.62 E-value=1.5e-15 Score=140.30 Aligned_cols=105 Identities=12% Similarity=0.075 Sum_probs=77.4
Q ss_pred ceEEEEeCCCCCChhHHHHHH---HHHHHCCCeEEEeCCCCCCCCCCCCCC--cCC--------HHHHHHHHHH-HHHHc
Q 021765 95 YKKFVLIHGEGFGAWCWYKTV---ASLEEVGLIPTALDLKGSGIDLSDTNS--VTT--------LAEYSKPLLD-YLENL 160 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~---~~L~~~G~~vi~~D~~G~G~S~~~~~~--~~~--------~~~~~~~l~~-~l~~l 160 (308)
.|+||++||++++...|..++ +.|...+|+|+++|+||||.|..+... .++ +.+++..... +++++
T Consensus 41 ~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 120 (339)
T PRK07581 41 DNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKF 120 (339)
T ss_pred CCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHh
Confidence 356777777776666665443 366656799999999999999754321 122 3344433233 55778
Q ss_pred CCCCc-EEEEEeChhHHHHHHHHHhCCccccEEEEEccccC
Q 021765 161 LEDEK-VILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 161 ~~~~~-v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~ 200 (308)
+.+ + ++||||||||++++.++.++|++|+++|++++...
T Consensus 121 gi~-~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~ 160 (339)
T PRK07581 121 GIE-RLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAK 160 (339)
T ss_pred CCC-ceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCC
Confidence 887 8 57999999999999999999999999999987653
No 48
>PRK11071 esterase YqiA; Provisional
Probab=99.61 E-value=1.4e-14 Score=123.24 Aligned_cols=156 Identities=17% Similarity=0.178 Sum_probs=103.4
Q ss_pred eEEEEeCCCCCChhHHHH--HHHHHHHC--CCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEe
Q 021765 96 KKFVLIHGEGFGAWCWYK--TVASLEEV--GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGH 171 (308)
Q Consensus 96 ~~vvllHG~~~~~~~~~~--~~~~L~~~--G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 171 (308)
|+||++||++++...|.. +.+.|.+. +|+|+++|+||++ .+.++.+.++++.++.+ +++++||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~~~~-~~~lvG~ 68 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEHGGD-PLGLVGS 68 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHcCCC-CeEEEEE
Confidence 689999999999999984 45666553 6999999999874 35677788888888876 9999999
Q ss_pred ChhHHHHHHHHHhCCccccEEEEEccccCCCCCChhhhhHhhhcchHHHHHHHHHHHhcCCCCCCCcccccCHHHHHHHh
Q 021765 172 SSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKGLY 251 (308)
Q Consensus 172 S~GG~~a~~~a~~~p~~v~~lVli~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~ 251 (308)
||||.++..++..+|. ++|++++... +.+.+....... .+... +..+.+.+..+.+..
T Consensus 69 S~Gg~~a~~~a~~~~~---~~vl~~~~~~-----~~~~~~~~~~~~------------~~~~~--~~~~~~~~~~~~d~~ 126 (190)
T PRK11071 69 SLGGYYATWLSQCFML---PAVVVNPAVR-----PFELLTDYLGEN------------ENPYT--GQQYVLESRHIYDLK 126 (190)
T ss_pred CHHHHHHHHHHHHcCC---CEEEECCCCC-----HHHHHHHhcCCc------------ccccC--CCcEEEcHHHHHHHH
Confidence 9999999999999883 4688887542 112111111110 00000 111234445554433
Q ss_pred cCCCchhhhhcccCCCCCccchhhhcccccccchhhchHHHHH
Q 021765 252 FNQSPSKVWYSSSLSFPIKQFLWFYQFAESLTSAYVSWKHFWD 294 (308)
Q Consensus 252 ~~~~~~~~~~l~~~~~p~~~~l~i~G~~D~~vp~~~~~~~~~~ 294 (308)
-.+. ..+..| .+++++||..|.+||...+.+.+-.
T Consensus 127 ~~~~-------~~i~~~-~~v~iihg~~De~V~~~~a~~~~~~ 161 (190)
T PRK11071 127 VMQI-------DPLESP-DLIWLLQQTGDEVLDYRQAVAYYAA 161 (190)
T ss_pred hcCC-------ccCCCh-hhEEEEEeCCCCcCCHHHHHHHHHh
Confidence 1221 112322 2378999999999999888766543
No 49
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.59 E-value=9.4e-15 Score=137.23 Aligned_cols=106 Identities=14% Similarity=0.225 Sum_probs=86.2
Q ss_pred ceEEEEeCCCCCChhH-------------HHHHHH---HHHHCCCeEEEeCCCCC-CCCCCCCC-------------CcC
Q 021765 95 YKKFVLIHGEGFGAWC-------------WYKTVA---SLEEVGLIPTALDLKGS-GIDLSDTN-------------SVT 144 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~-------------~~~~~~---~L~~~G~~vi~~D~~G~-G~S~~~~~-------------~~~ 144 (308)
+|+|||+||++++... |..++. .|...+|+|+++|++|+ |.|+.+.. ..+
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~ 127 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVI 127 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcC
Confidence 6899999999999885 555552 34344799999999983 54432210 146
Q ss_pred CHHHHHHHHHHHHHHcCCCCc-EEEEEeChhHHHHHHHHHhCCccccEEEEEccccCC
Q 021765 145 TLAEYSKPLLDYLENLLEDEK-VILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (308)
Q Consensus 145 ~~~~~~~~l~~~l~~l~~~~~-v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~ 201 (308)
++.++++++.++++.++.+ + ++|+||||||.+++.++..+|++|+++|++++....
T Consensus 128 ~~~~~~~~~~~~l~~l~~~-~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 184 (379)
T PRK00175 128 TIRDWVRAQARLLDALGIT-RLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARL 184 (379)
T ss_pred CHHHHHHHHHHHHHHhCCC-CceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCccc
Confidence 8999999999999999987 7 599999999999999999999999999999987643
No 50
>PRK10566 esterase; Provisional
Probab=99.56 E-value=8.4e-14 Score=122.73 Aligned_cols=99 Identities=14% Similarity=0.130 Sum_probs=70.3
Q ss_pred CceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCH-------HHHHHHHHHHHH---HcC-C
Q 021765 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTL-------AEYSKPLLDYLE---NLL-E 162 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~-------~~~~~~l~~~l~---~l~-~ 162 (308)
..|+||++||++++...|..+++.|.++||+|+++|+||+|.+..... ...+ .+..+++.++++ ... .
T Consensus 26 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDE-ARRLNHFWQILLQNMQEFPTLRAAIREEGWL 104 (249)
T ss_pred CCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCcc-ccchhhHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 357999999999999889999999999999999999999997532211 1111 112233333333 222 1
Q ss_pred -CCcEEEEEeChhHHHHHHHHHhCCccccEEEE
Q 021765 163 -DEKVILVGHSSGGACVSYALEHFPQKISKAIF 194 (308)
Q Consensus 163 -~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVl 194 (308)
.++++++|||+||.+++.++..+|+ +.+.+.
T Consensus 105 ~~~~i~v~G~S~Gg~~al~~~~~~~~-~~~~~~ 136 (249)
T PRK10566 105 LDDRLAVGGASMGGMTALGIMARHPW-VKCVAS 136 (249)
T ss_pred CccceeEEeecccHHHHHHHHHhCCC-eeEEEE
Confidence 2489999999999999999988876 444433
No 51
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.56 E-value=7.7e-14 Score=112.26 Aligned_cols=92 Identities=25% Similarity=0.381 Sum_probs=73.6
Q ss_pred EEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHH-HHcCCCCcEEEEEeChhH
Q 021765 97 KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYL-ENLLEDEKVILVGHSSGG 175 (308)
Q Consensus 97 ~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l-~~l~~~~~v~lvGhS~GG 175 (308)
+||++||++++...|..+++.|.++||.|+.+|+|++|.+.. .+.++.+.+.+ +......+++++|||+||
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg 72 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDG--------ADAVERVLADIRAGYPDPDRIILIGHSMGG 72 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHH--------SHHHHHHHHHHHHHHCTCCEEEEEEETHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccch--------hHHHHHHHHHHHhhcCCCCcEEEEEEccCc
Confidence 689999999999999999999999999999999999996521 11233333332 212233499999999999
Q ss_pred HHHHHHHHhCCccccEEEEEcc
Q 021765 176 ACVSYALEHFPQKISKAIFLCA 197 (308)
Q Consensus 176 ~~a~~~a~~~p~~v~~lVli~~ 197 (308)
.++..++... .+|+++|++++
T Consensus 73 ~~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 73 AIAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp HHHHHHHHHS-TTESEEEEESE
T ss_pred HHHHHHhhhc-cceeEEEEecC
Confidence 9999999987 68999999998
No 52
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.54 E-value=4.1e-13 Score=116.02 Aligned_cols=108 Identities=16% Similarity=0.141 Sum_probs=75.3
Q ss_pred CCceEEEEeCCCCCChhHHH---HHHHHHHHCCCeEEEeCCCCCCCCCCCC---------CCcCCHHHHHHHHHHHH-HH
Q 021765 93 IQYKKFVLIHGEGFGAWCWY---KTVASLEEVGLIPTALDLKGSGIDLSDT---------NSVTTLAEYSKPLLDYL-EN 159 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~---~~~~~L~~~G~~vi~~D~~G~G~S~~~~---------~~~~~~~~~~~~l~~~l-~~ 159 (308)
...|+||++||.+++...|. .+.+.+.+.||.|+++|++|++.+.... .......+ +.++.+.+ +.
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~ 89 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVES-LHQLIDAVKAN 89 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHH-HHHHHHHHHHh
Confidence 34689999999998887765 3556666779999999999987532110 00111122 22222222 23
Q ss_pred cCCC-CcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCC
Q 021765 160 LLED-EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (308)
Q Consensus 160 l~~~-~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~ 201 (308)
...+ ++++|+|||+||.+++.++..+|+.+.+++.+++....
T Consensus 90 ~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~ 132 (212)
T TIGR01840 90 YSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYG 132 (212)
T ss_pred cCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCccc
Confidence 2322 48999999999999999999999999999999887644
No 53
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.51 E-value=1e-12 Score=118.06 Aligned_cols=103 Identities=9% Similarity=0.135 Sum_probs=79.2
Q ss_pred CceEEEEeCCCCC----ChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHc-----CCCC
Q 021765 94 QYKKFVLIHGEGF----GAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL-----LEDE 164 (308)
Q Consensus 94 ~~~~vvllHG~~~----~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l-----~~~~ 164 (308)
+++.||++||+.. +...|..+++.|.++||+|+++|++|||.|.... .++.++.+++.++++.+ +.+
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~---~~~~~~~~d~~~~~~~l~~~~~g~~- 100 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN---LGFEGIDADIAAAIDAFREAAPHLR- 100 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHHhhCCCCC-
Confidence 4567888887653 3335677899999999999999999999987532 35666666666666655 233
Q ss_pred cEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCC
Q 021765 165 KVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (308)
Q Consensus 165 ~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~ 201 (308)
+++++|||+||.+++.++.. +.+|+++|+++++...
T Consensus 101 ~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 101 RIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRT 136 (274)
T ss_pred cEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCC
Confidence 79999999999999988765 4689999999987543
No 54
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.51 E-value=4e-13 Score=124.86 Aligned_cols=102 Identities=16% Similarity=0.121 Sum_probs=79.4
Q ss_pred ceEEEEeCCCCCChhHH-----HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHH-HHH----HHHHcCCCC
Q 021765 95 YKKFVLIHGEGFGAWCW-----YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKP-LLD----YLENLLEDE 164 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~~-----~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~-l~~----~l~~l~~~~ 164 (308)
+++||++||+..+...| ..+++.|.++||+|+++|++|+|.+... .++.+++.+ +.+ +.+..+..
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~----~~~~d~~~~~~~~~v~~l~~~~~~~- 136 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY----LTLDDYINGYIDKCVDYICRTSKLD- 136 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc----CCHHHHHHHHHHHHHHHHHHHhCCC-
Confidence 45899999986655554 5799999999999999999999876532 356665432 333 33334444
Q ss_pred cEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCC
Q 021765 165 KVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (308)
Q Consensus 165 ~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~ 201 (308)
+++++||||||.++..++..+|++|+++|+++++...
T Consensus 137 ~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 137 QISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred cccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 8999999999999999999999999999999987643
No 55
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.51 E-value=2.2e-13 Score=128.55 Aligned_cols=108 Identities=21% Similarity=0.182 Sum_probs=81.4
Q ss_pred CCCceEEEEeCCCCCCh--hHHHH-HHHHHHH--CCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHc------
Q 021765 92 NIQYKKFVLIHGEGFGA--WCWYK-TVASLEE--VGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL------ 160 (308)
Q Consensus 92 ~~~~~~vvllHG~~~~~--~~~~~-~~~~L~~--~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l------ 160 (308)
+.++|++|++||++.+. ..|.. +.+.|.. ..|+|+++|++|+|.+...... ......++++.++++.+
T Consensus 38 n~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~-~~t~~vg~~la~lI~~L~~~~gl 116 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSA-AYTKLVGKDVAKFVNWMQEEFNY 116 (442)
T ss_pred CCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcccc-ccHHHHHHHHHHHHHHHHHhhCC
Confidence 45679999999998754 45764 6665542 2599999999999987644322 23345555566666544
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCC
Q 021765 161 LEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (308)
Q Consensus 161 ~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~ 201 (308)
..+ +++||||||||.+|..++..+|++|.++++++|..|.
T Consensus 117 ~l~-~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 117 PWD-NVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred CCC-cEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 234 9999999999999999999999999999999998654
No 56
>PRK10985 putative hydrolase; Provisional
Probab=99.50 E-value=1.1e-12 Score=120.71 Aligned_cols=105 Identities=16% Similarity=0.226 Sum_probs=74.4
Q ss_pred CceEEEEeCCCCCChh--HHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCc--CCHHHHHHHHHHHHHH-cCCCCcEEE
Q 021765 94 QYKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSV--TTLAEYSKPLLDYLEN-LLEDEKVIL 168 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~--~~~~~~~~~l~~~l~~-l~~~~~v~l 168 (308)
.+|+||++||++++.. .+..+++.|.++||+|+++|+||||.+....... ....+++..+.+.+.. ++.. ++++
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~-~~~~ 135 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHV-PTAA 135 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCC-CEEE
Confidence 4679999999987744 3457889999999999999999999765322111 1122333333444433 4444 8999
Q ss_pred EEeChhHHHHHHHHHhCCcc--ccEEEEEcccc
Q 021765 169 VGHSSGGACVSYALEHFPQK--ISKAIFLCATM 199 (308)
Q Consensus 169 vGhS~GG~~a~~~a~~~p~~--v~~lVli~~~~ 199 (308)
+||||||.++..++..+++. +.++|+++++.
T Consensus 136 vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~ 168 (324)
T PRK10985 136 VGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPL 168 (324)
T ss_pred EEecchHHHHHHHHHhhCCCCCccEEEEEcCCC
Confidence 99999999877777666543 88999998864
No 57
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.49 E-value=2.7e-13 Score=117.80 Aligned_cols=106 Identities=25% Similarity=0.348 Sum_probs=88.2
Q ss_pred CCCceEEEEeCCCCCChhHHHHHHHHHHHC-CCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCC--CCcEEE
Q 021765 92 NIQYKKFVLIHGEGFGAWCWYKTVASLEEV-GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE--DEKVIL 168 (308)
Q Consensus 92 ~~~~~~vvllHG~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~--~~~v~l 168 (308)
...+|.+++.||.+.+.-.|..++..|... ..+|+++|+||||.+.-......+.+.+++|+.++++.+.. ..+|+|
T Consensus 71 ~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iil 150 (343)
T KOG2564|consen 71 ATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIIL 150 (343)
T ss_pred CCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEE
Confidence 347899999999999999999999888653 46788999999999987666667999999999999988742 248999
Q ss_pred EEeChhHHHHHHHHHh--CCccccEEEEEccc
Q 021765 169 VGHSSGGACVSYALEH--FPQKISKAIFLCAT 198 (308)
Q Consensus 169 vGhS~GG~~a~~~a~~--~p~~v~~lVli~~~ 198 (308)
|||||||.++.+.+.. .|. +.+++.|+-.
T Consensus 151 VGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 151 VGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred Eeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 9999999999877653 454 8888888755
No 58
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.48 E-value=1.4e-12 Score=126.28 Aligned_cols=108 Identities=16% Similarity=0.067 Sum_probs=80.4
Q ss_pred CceEEEEeCCCCCChhHHH-----HHHHHHHHCCCeEEEeCCCCCCCCCCCCC-CcCCHHHHHHHHHHHHHHcCCCCcEE
Q 021765 94 QYKKFVLIHGEGFGAWCWY-----KTVASLEEVGLIPTALDLKGSGIDLSDTN-SVTTLAEYSKPLLDYLENLLEDEKVI 167 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~-----~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l~~l~~~~~v~ 167 (308)
.+++||++||+....++|+ .++++|.++||+|+++|++|+|.+..... ..+..+...+.+..+.+.++.. +++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~-kv~ 265 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEK-QVN 265 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCC-CeE
Confidence 4589999999998888885 79999999999999999999998754321 1122223334455555556665 899
Q ss_pred EEEeChhHHHHH----HHHHhC-CccccEEEEEccccCCC
Q 021765 168 LVGHSSGGACVS----YALEHF-PQKISKAIFLCATMVSD 202 (308)
Q Consensus 168 lvGhS~GG~~a~----~~a~~~-p~~v~~lVli~~~~~~~ 202 (308)
++||||||.++. .++..+ +++|++++++++.....
T Consensus 266 lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 266 CVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFS 305 (532)
T ss_pred EEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCC
Confidence 999999999752 234444 78899999999886543
No 59
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.46 E-value=3e-13 Score=121.47 Aligned_cols=110 Identities=18% Similarity=0.119 Sum_probs=78.5
Q ss_pred cCCCceEEEEeCCCCCCh-hHHHH-HHHHH-HHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHc----CC-
Q 021765 91 ENIQYKKFVLIHGEGFGA-WCWYK-TVASL-EEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL----LE- 162 (308)
Q Consensus 91 ~~~~~~~vvllHG~~~~~-~~~~~-~~~~L-~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~- 162 (308)
-+.++|++|++||+.++. ..|.. +.+.+ ...+|+|+++|+++++.+... ....+.....+++.++++.+ +.
T Consensus 32 f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~-~a~~~~~~v~~~la~~l~~L~~~~g~~ 110 (275)
T cd00707 32 FNPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYP-QAVNNTRVVGAELAKFLDFLVDNTGLS 110 (275)
T ss_pred CCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChH-HHHHhHHHHHHHHHHHHHHHHHhcCCC
Confidence 356678999999999887 56764 44444 445799999999987432211 11123344444555555443 21
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCC
Q 021765 163 DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (308)
Q Consensus 163 ~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~ 201 (308)
.+++++|||||||.++..++..+|++|.++|.++|..+.
T Consensus 111 ~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 111 LENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred hHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 148999999999999999999999999999999988654
No 60
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.38 E-value=3.8e-13 Score=111.67 Aligned_cols=200 Identities=15% Similarity=0.033 Sum_probs=127.8
Q ss_pred cCCeeeEEEecCCCceEEEEeCCCCCChh-HHHHHHHHHHHC-CCeEEEeCCCCCCCCCCCCC--CcCCHHHHHHHHHHH
Q 021765 81 SNGKQDTNILENIQYKKFVLIHGEGFGAW-CWYKTVASLEEV-GLIPTALDLKGSGIDLSDTN--SVTTLAEYSKPLLDY 156 (308)
Q Consensus 81 ~~~~~~~~~~~~~~~~~vvllHG~~~~~~-~~~~~~~~L~~~-G~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~~l~~~ 156 (308)
.+|.++.|...+.+...|++++|.-++.+ +|.+.+..|.+. -++|+++|.||+|.|..+.. ...-+..++++..++
T Consensus 28 vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdL 107 (277)
T KOG2984|consen 28 VNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDL 107 (277)
T ss_pred ecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHH
Confidence 47778877666666678999999866654 788766655443 38999999999999875443 233566778888899
Q ss_pred HHHcCCCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCCCCC--ChhhhhHhhhcchHHHHHHHHHHHhcCCCC
Q 021765 157 LENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQ--RPFDVFAEELGSAERFMQESQFLIYGNGKD 234 (308)
Q Consensus 157 l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 234 (308)
++.+... ++.|+|||-||..++.+|.++++.|.++|++++..-.+.. ..+..+.+--. +..-.++.....|+...
T Consensus 108 M~aLk~~-~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~k-Ws~r~R~P~e~~Yg~e~- 184 (277)
T KOG2984|consen 108 MEALKLE-PFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNK-WSARGRQPYEDHYGPET- 184 (277)
T ss_pred HHHhCCC-CeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhh-hhhhhcchHHHhcCHHH-
Confidence 9999987 9999999999999999999999999999999887644322 11111111111 10011111111111100
Q ss_pred CCCcccccCHHHHHHHhcCCCc--hhhhhcccCCCCCccchhhhcccccccchhhc
Q 021765 235 KPPTGFMFEKQQMKGLYFNQSP--SKVWYSSSLSFPIKQFLWFYQFAESLTSAYVS 288 (308)
Q Consensus 235 ~~~~~~~~~~~~l~~~~~~~~~--~~~~~l~~~~~p~~~~l~i~G~~D~~vp~~~~ 288 (308)
-++.+.-..+ ....|.+.+. --+..+.++++| +|++||..|.+++....
T Consensus 185 -f~~~wa~wvD-~v~qf~~~~dG~fCr~~lp~vkcP---tli~hG~kDp~~~~~hv 235 (277)
T KOG2984|consen 185 -FRTQWAAWVD-VVDQFHSFCDGRFCRLVLPQVKCP---TLIMHGGKDPFCGDPHV 235 (277)
T ss_pred -HHHHHHHHHH-HHHHHhhcCCCchHhhhcccccCC---eeEeeCCcCCCCCCCCc
Confidence 0000000111 1122333331 234478889999 99999999999886543
No 61
>PLN02442 S-formylglutathione hydrolase
Probab=99.37 E-value=3.8e-11 Score=108.41 Aligned_cols=106 Identities=17% Similarity=0.161 Sum_probs=73.7
Q ss_pred CceEEEEeCCCCCChhHHHH---HHHHHHHCCCeEEEeCCCCCCC-----CCC-----------CCC-C---cCC-----
Q 021765 94 QYKKFVLIHGEGFGAWCWYK---TVASLEEVGLIPTALDLKGSGI-----DLS-----------DTN-S---VTT----- 145 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~---~~~~L~~~G~~vi~~D~~G~G~-----S~~-----------~~~-~---~~~----- 145 (308)
..|+|+|+||+.++...|.. +.+.+...|+.|+.+|..++|. +.. +.. . ...
T Consensus 46 ~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (283)
T PLN02442 46 KVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYV 125 (283)
T ss_pred CCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhH
Confidence 45899999999998887753 4466677899999999876651 100 000 0 001
Q ss_pred HHHHHHHHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccC
Q 021765 146 LAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 146 ~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~ 200 (308)
.++....+...++.++.+ +++|+||||||.+++.++.++|+++++++.+++...
T Consensus 126 ~~~l~~~i~~~~~~~~~~-~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 126 VKELPKLLSDNFDQLDTS-RASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred HHHHHHHHHHHHHhcCCC-ceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 122223333333444554 899999999999999999999999999999988743
No 62
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.35 E-value=1.4e-11 Score=107.99 Aligned_cols=109 Identities=20% Similarity=0.228 Sum_probs=98.3
Q ss_pred eEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhH
Q 021765 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (308)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG 175 (308)
.+||-+||.+++..+|..+.+.|.+.|.+++.+++||+|.+.+.....++-.+...-+.++++.++..++++++|||.|+
T Consensus 36 gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGc 115 (297)
T PF06342_consen 36 GTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGHSRGC 115 (297)
T ss_pred eeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEeccch
Confidence 38999999999999999999999999999999999999999987777778888888899999999998899999999999
Q ss_pred HHHHHHHHhCCccccEEEEEccccCCC--CCCh
Q 021765 176 ACVSYALEHFPQKISKAIFLCATMVSD--GQRP 206 (308)
Q Consensus 176 ~~a~~~a~~~p~~v~~lVli~~~~~~~--g~~~ 206 (308)
-.|+.++..+| ..++++++|+...+ |.++
T Consensus 116 enal~la~~~~--~~g~~lin~~G~r~HkgIrp 146 (297)
T PF06342_consen 116 ENALQLAVTHP--LHGLVLINPPGLRPHKGIRP 146 (297)
T ss_pred HHHHHHHhcCc--cceEEEecCCccccccCcCH
Confidence 99999999885 77999999987554 5554
No 63
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.35 E-value=6.2e-11 Score=106.51 Aligned_cols=106 Identities=19% Similarity=0.175 Sum_probs=75.3
Q ss_pred CceEEEEeCCCCCChhHHHHH--H-HHHHHCCCeEEEeCC--CCCCCCCCC-------------------CCCcCCHHHH
Q 021765 94 QYKKFVLIHGEGFGAWCWYKT--V-ASLEEVGLIPTALDL--KGSGIDLSD-------------------TNSVTTLAEY 149 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~--~-~~L~~~G~~vi~~D~--~G~G~S~~~-------------------~~~~~~~~~~ 149 (308)
+.|+||++||++++...|... + ..+.+.|+.|+++|. +|+|.+... ........++
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 468999999999998888532 3 334456899999998 455432210 0001123333
Q ss_pred -HHHHHHHHHHc-CCC-CcEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 150 -SKPLLDYLENL-LED-EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 150 -~~~l~~~l~~l-~~~-~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
++++..+++.. +.+ ++++++||||||.+++.++..+|+.+++++.+++..
T Consensus 121 ~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 121 IVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred HHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCcc
Confidence 56777777662 221 389999999999999999999999999999988774
No 64
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.35 E-value=2.1e-11 Score=114.58 Aligned_cols=107 Identities=13% Similarity=0.167 Sum_probs=83.9
Q ss_pred ceEEEEeCCCCCChh-------------HHHHHHH---HHHHCCCeEEEeCCCCCCCCCCC-------------------
Q 021765 95 YKKFVLIHGEGFGAW-------------CWYKTVA---SLEEVGLIPTALDLKGSGIDLSD------------------- 139 (308)
Q Consensus 95 ~~~vvllHG~~~~~~-------------~~~~~~~---~L~~~G~~vi~~D~~G~G~S~~~------------------- 139 (308)
.++||++|++.++.. .|..++- .|....|.||++|..|.+.|..+
T Consensus 56 ~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~ 135 (389)
T PRK06765 56 SNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYG 135 (389)
T ss_pred CCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccC
Confidence 479999999988642 1554442 34444599999999987653211
Q ss_pred -CCCcCCHHHHHHHHHHHHHHcCCCCcEE-EEEeChhHHHHHHHHHhCCccccEEEEEccccCCC
Q 021765 140 -TNSVTTLAEYSKPLLDYLENLLEDEKVI-LVGHSSGGACVSYALEHFPQKISKAIFLCATMVSD 202 (308)
Q Consensus 140 -~~~~~~~~~~~~~l~~~l~~l~~~~~v~-lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~~ 202 (308)
..+..++.++++++..++++++.. ++. ++||||||++++.++.++|++|+++|++++.....
T Consensus 136 ~~fP~~t~~d~~~~~~~ll~~lgi~-~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~ 199 (389)
T PRK06765 136 MDFPVVTILDFVRVQKELIKSLGIA-RLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQND 199 (389)
T ss_pred CCCCcCcHHHHHHHHHHHHHHcCCC-CceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCC
Confidence 113468999999999999999997 775 99999999999999999999999999998876543
No 65
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.34 E-value=4.3e-11 Score=100.48 Aligned_cols=202 Identities=15% Similarity=0.143 Sum_probs=127.2
Q ss_pred EEEeeccCCee-eEEEecCCCceEEEEeCCCCCChh--HHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHH
Q 021765 75 TLSESLSNGKQ-DTNILENIQYKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSK 151 (308)
Q Consensus 75 ~~~~~~~~~~~-~~~~~~~~~~~~vvllHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 151 (308)
.+..|...... +-.....++...+|++||+-.+.. ....++..|++.|+.++.+|++|.|.|++.-... .....++
T Consensus 12 ~ivi~n~~ne~lvg~lh~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~G-n~~~ead 90 (269)
T KOG4667|consen 12 KIVIPNSRNEKLVGLLHETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYG-NYNTEAD 90 (269)
T ss_pred EEEeccCCCchhhcceeccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccC-cccchHH
Confidence 34444444433 234556677889999999988765 3456788999999999999999999998654322 3444457
Q ss_pred HHHHHHHHcCCCCc--EEEEEeChhHHHHHHHHHhCCccccEEEEEccccCCCCCChhhhhHhhhcch-HHHHHHHHHHH
Q 021765 152 PLLDYLENLLEDEK--VILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSA-ERFMQESQFLI 228 (308)
Q Consensus 152 ~l~~~l~~l~~~~~--v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~l 228 (308)
|+..+++.+....+ -+++|||-||.++..++.++.+ +..+|.+++-....+ .+.+.+... .+++.+..+ +
T Consensus 91 DL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~-----~I~eRlg~~~l~~ike~Gf-i 163 (269)
T KOG4667|consen 91 DLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKN-----GINERLGEDYLERIKEQGF-I 163 (269)
T ss_pred HHHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhc-----chhhhhcccHHHHHHhCCc-e
Confidence 77777777643312 3689999999999999999886 777777766542221 122222221 112222111 1
Q ss_pred hcCCCCCCCcccccCHHHHHHHhcCCCchhhhhcccCCCCCccchhhhcccccccchhhch
Q 021765 229 YGNGKDKPPTGFMFEKQQMKGLYFNQSPSKVWYSSSLSFPIKQFLWFYQFAESLTSAYVSW 289 (308)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~p~~~~l~i~G~~D~~vp~~~~~ 289 (308)
..+...-.....+.++-+.+.+..+..+. ..--..+++ +|-.||..|.+||..++=
T Consensus 164 -d~~~rkG~y~~rvt~eSlmdrLntd~h~a-clkId~~C~---VLTvhGs~D~IVPve~Ak 219 (269)
T KOG4667|consen 164 -DVGPRKGKYGYRVTEESLMDRLNTDIHEA-CLKIDKQCR---VLTVHGSEDEIVPVEDAK 219 (269)
T ss_pred -ecCcccCCcCceecHHHHHHHHhchhhhh-hcCcCccCc---eEEEeccCCceeechhHH
Confidence 11111122334456666666665555433 233445667 999999999999987653
No 66
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.34 E-value=2.5e-11 Score=104.40 Aligned_cols=102 Identities=26% Similarity=0.352 Sum_probs=84.0
Q ss_pred ceEEEEeCCCCCChhHHHHHHHHHHHCC--CeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeC
Q 021765 95 YKKFVLIHGEGFGAWCWYKTVASLEEVG--LIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G--~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (308)
+++|+++||++++...|......+.... |+++.+|+||||.|. .. .......+.++..+++.++.. +++++|||
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~~~~~~~~~~~-~~~l~G~S 96 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDLAALLDALGLE-KVVLVGHS 96 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHHHHHHHHhCCC-ceEEEEec
Confidence 5699999999999999887433333321 899999999999987 11 234555588888999998877 79999999
Q ss_pred hhHHHHHHHHHhCCccccEEEEEccccC
Q 021765 173 SGGACVSYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 173 ~GG~~a~~~a~~~p~~v~~lVli~~~~~ 200 (308)
+||.++..++..+|+++.++|++++...
T Consensus 97 ~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 97 MGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred ccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 9999999999999999999999998754
No 67
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.33 E-value=4.5e-11 Score=103.48 Aligned_cols=110 Identities=15% Similarity=0.184 Sum_probs=84.6
Q ss_pred EEEe-cCCC-ceEEEEeCCCCCChhHHHHHHHHHHH-CCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcC-C
Q 021765 87 TNIL-ENIQ-YKKFVLIHGEGFGAWCWYKTVASLEE-VGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL-E 162 (308)
Q Consensus 87 ~~~~-~~~~-~~~vvllHG~~~~~~~~~~~~~~L~~-~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~-~ 162 (308)
..++ .... .+++++.||..........+...|.. -+++|+++|+.|+|.|.+.+.+. ..-++++.+.++++.-. .
T Consensus 50 ~~y~~~~~~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~-n~y~Di~avye~Lr~~~g~ 128 (258)
T KOG1552|consen 50 CMYVRPPEAAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER-NLYADIKAVYEWLRNRYGS 128 (258)
T ss_pred EEEEcCccccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccc-cchhhHHHHHHHHHhhcCC
Confidence 3444 3333 48999999996665544344444433 36999999999999999877544 66777788888887665 4
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 163 DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 163 ~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
.++++|+|+|+|...+..+|.+.| +.++|+.+|+.
T Consensus 129 ~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~ 163 (258)
T KOG1552|consen 129 PERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFT 163 (258)
T ss_pred CceEEEEEecCCchhhhhHhhcCC--cceEEEeccch
Confidence 469999999999999999999988 99999999874
No 68
>PLN02872 triacylglycerol lipase
Probab=99.31 E-value=6.9e-12 Score=117.95 Aligned_cols=104 Identities=20% Similarity=0.287 Sum_probs=79.3
Q ss_pred ceEEEEeCCCCCChhHHH------HHHHHHHHCCCeEEEeCCCCCCCCCCCC-----C-C--cCCHHHHH-HHHHHHHHH
Q 021765 95 YKKFVLIHGEGFGAWCWY------KTVASLEEVGLIPTALDLKGSGIDLSDT-----N-S--VTTLAEYS-KPLLDYLEN 159 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~~~------~~~~~L~~~G~~vi~~D~~G~G~S~~~~-----~-~--~~~~~~~~-~~l~~~l~~ 159 (308)
+|+|||+||++.+...|. .++..|+++||+|+++|+||++.|.+.. . . ..++.+.+ .|+.++++.
T Consensus 74 ~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~ 153 (395)
T PLN02872 74 GPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHY 153 (395)
T ss_pred CCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHH
Confidence 579999999999888883 4556788999999999999988653211 1 1 24677776 678777776
Q ss_pred c---CCCCcEEEEEeChhHHHHHHHHHhCCc---cccEEEEEccccC
Q 021765 160 L---LEDEKVILVGHSSGGACVSYALEHFPQ---KISKAIFLCATMV 200 (308)
Q Consensus 160 l---~~~~~v~lvGhS~GG~~a~~~a~~~p~---~v~~lVli~~~~~ 200 (308)
+ .. +++++|||||||.++..++ .+|+ +|+.+++++|...
T Consensus 154 i~~~~~-~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~ 198 (395)
T PLN02872 154 VYSITN-SKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISY 198 (395)
T ss_pred HHhccC-CceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhh
Confidence 5 23 4899999999999998555 4665 6888888888754
No 69
>PLN00021 chlorophyllase
Probab=99.31 E-value=1.7e-11 Score=111.98 Aligned_cols=102 Identities=19% Similarity=0.181 Sum_probs=75.6
Q ss_pred CCCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHH----c-------
Q 021765 92 NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN----L------- 160 (308)
Q Consensus 92 ~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~----l------- 160 (308)
.+..|+|||+||++.+...|..++++|+++||.|+++|++|++... ....+.+ +.++.+++.. +
T Consensus 49 ~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~----~~~~i~d-~~~~~~~l~~~l~~~l~~~~~~ 123 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPD----GTDEIKD-AAAVINWLSSGLAAVLPEGVRP 123 (313)
T ss_pred CCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCC----chhhHHH-HHHHHHHHHhhhhhhccccccc
Confidence 3456899999999999889999999999999999999999865321 1112222 2333333322 1
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhCCc-----cccEEEEEcccc
Q 021765 161 LEDEKVILVGHSSGGACVSYALEHFPQ-----KISKAIFLCATM 199 (308)
Q Consensus 161 ~~~~~v~lvGhS~GG~~a~~~a~~~p~-----~v~~lVli~~~~ 199 (308)
+. ++++++|||+||.+++.++..+++ +++++|.+++..
T Consensus 124 d~-~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 124 DL-SKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred Ch-hheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 12 379999999999999999988764 689999998854
No 70
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.30 E-value=1.4e-11 Score=103.49 Aligned_cols=109 Identities=17% Similarity=0.183 Sum_probs=85.7
Q ss_pred cCCCceEEEEeCCCCCChhHHHHHHH-HHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCC--CCcEE
Q 021765 91 ENIQYKKFVLIHGEGFGAWCWYKTVA-SLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE--DEKVI 167 (308)
Q Consensus 91 ~~~~~~~vvllHG~~~~~~~~~~~~~-~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~--~~~v~ 167 (308)
...+.|+++++||..++.......+. .+...+.+|+.+++||+|.|++.+.+ ..+.-+++.+.+.+-.-.. ..+++
T Consensus 74 ~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE-~GL~lDs~avldyl~t~~~~dktkiv 152 (300)
T KOG4391|consen 74 SESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSE-EGLKLDSEAVLDYLMTRPDLDKTKIV 152 (300)
T ss_pred ccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccc-cceeccHHHHHHHHhcCccCCcceEE
Confidence 45578999999999999887776665 34566899999999999999886643 3555556665555543321 24899
Q ss_pred EEEeChhHHHHHHHHHhCCccccEEEEEccccC
Q 021765 168 LVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 168 lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~ 200 (308)
+.|.|+||.+|..+|.+..+++.++|+-..+..
T Consensus 153 lfGrSlGGAvai~lask~~~ri~~~ivENTF~S 185 (300)
T KOG4391|consen 153 LFGRSLGGAVAIHLASKNSDRISAIIVENTFLS 185 (300)
T ss_pred EEecccCCeeEEEeeccchhheeeeeeechhcc
Confidence 999999999999999999999999999888753
No 71
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.28 E-value=1.4e-11 Score=106.07 Aligned_cols=75 Identities=24% Similarity=0.314 Sum_probs=69.2
Q ss_pred CeEEEeCCCCCCCCCC---CCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccc
Q 021765 123 LIPTALDLKGSGIDLS---DTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCAT 198 (308)
Q Consensus 123 ~~vi~~D~~G~G~S~~---~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~ 198 (308)
|+|+++|+||+|.|+. ......+..+.++++..+++.++.. +++++||||||.++..++..+|++|+++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIK-KINLVGHSMGGMLALEYAAQYPERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTS-SEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCC-CeEEEEECCChHHHHHHHHHCchhhcCcEEEeee
Confidence 6899999999999985 4456678999999999999999998 7999999999999999999999999999999986
No 72
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.28 E-value=6.1e-11 Score=124.13 Aligned_cols=102 Identities=23% Similarity=0.247 Sum_probs=79.8
Q ss_pred CceEEEEeCCCCCChhHHHHH-----HHHHHHCCCeEEEeCCCCCCCCCCCCC-CcCCHHHHHHHHHHHHHH---cCCCC
Q 021765 94 QYKKFVLIHGEGFGAWCWYKT-----VASLEEVGLIPTALDLKGSGIDLSDTN-SVTTLAEYSKPLLDYLEN---LLEDE 164 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~-----~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l~~---l~~~~ 164 (308)
.+++|||+||+..+...|+.. ++.|.++||+|+++|+ |.+..... ...++.+++..+.+.++. +..+
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~- 141 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGR- 141 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCC-
Confidence 568999999999999999854 8899999999999995 54443221 235788888777776655 3333
Q ss_pred cEEEEEeChhHHHHHHHHHhC-CccccEEEEEcccc
Q 021765 165 KVILVGHSSGGACVSYALEHF-PQKISKAIFLCATM 199 (308)
Q Consensus 165 ~v~lvGhS~GG~~a~~~a~~~-p~~v~~lVli~~~~ 199 (308)
+++++||||||.+++.++..+ +++|+++|+++++.
T Consensus 142 ~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~ 177 (994)
T PRK07868 142 DVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPV 177 (994)
T ss_pred ceEEEEEChhHHHHHHHHHhcCCCccceEEEEeccc
Confidence 899999999999998887644 56899999988875
No 73
>PRK11460 putative hydrolase; Provisional
Probab=99.27 E-value=7.6e-11 Score=103.37 Aligned_cols=105 Identities=12% Similarity=0.065 Sum_probs=69.9
Q ss_pred CCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCC-------CC---CCCcC---CHHHHHHHHHHHHHH
Q 021765 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDL-------SD---TNSVT---TLAEYSKPLLDYLEN 159 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~-------~~---~~~~~---~~~~~~~~l~~~l~~ 159 (308)
...+.||++||++++...|..+++.|.+.++.+..++.+|..... .. ..... .+.+....+.++++.
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 93 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRY 93 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHH
Confidence 346799999999999999999999998776655555555542211 00 00001 122333333333333
Q ss_pred ----cCCC-CcEEEEEeChhHHHHHHHHHhCCccccEEEEEcc
Q 021765 160 ----LLED-EKVILVGHSSGGACVSYALEHFPQKISKAIFLCA 197 (308)
Q Consensus 160 ----l~~~-~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~ 197 (308)
.+.+ ++++++|||+||.+++.++..+|+.+.++|.+++
T Consensus 94 ~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg 136 (232)
T PRK11460 94 WQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSG 136 (232)
T ss_pred HHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecc
Confidence 3322 4799999999999999999888887787777655
No 74
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.27 E-value=6e-11 Score=118.63 Aligned_cols=90 Identities=21% Similarity=0.169 Sum_probs=74.0
Q ss_pred ceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCC---------CCC-------------cCCHHHHHHH
Q 021765 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSD---------TNS-------------VTTLAEYSKP 152 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~---------~~~-------------~~~~~~~~~~ 152 (308)
.|+|||+||++++...|..+++.|.++||+|+++|+||||.|... ... ..++.+.+.|
T Consensus 449 ~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~D 528 (792)
T TIGR03502 449 WPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILD 528 (792)
T ss_pred CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHH
Confidence 468999999999999999999999988999999999999998432 111 1367888888
Q ss_pred HHHHHHHcC--------------C-CCcEEEEEeChhHHHHHHHHHh
Q 021765 153 LLDYLENLL--------------E-DEKVILVGHSSGGACVSYALEH 184 (308)
Q Consensus 153 l~~~l~~l~--------------~-~~~v~lvGhS~GG~~a~~~a~~ 184 (308)
+..+...+. . ..+++++||||||+++..++..
T Consensus 529 ll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 529 LLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 887776665 1 2489999999999999988875
No 75
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.23 E-value=7.2e-11 Score=105.64 Aligned_cols=189 Identities=14% Similarity=0.141 Sum_probs=124.9
Q ss_pred CCceEEEEeCCCCCChhHHHHHHHHHHHC-CCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcC---CCCcEEE
Q 021765 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEV-GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL---EDEKVIL 168 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~---~~~~v~l 168 (308)
...|+++++||+.++...|..+...|... +-.|+++|.|.||.|.... ..+....++++..+++... ...++++
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~--~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l 127 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT--VHNYEAMAEDVKLFIDGVGGSTRLDPVVL 127 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc--ccCHHHHHHHHHHHHHHcccccccCCcee
Confidence 45799999999999999999999988754 6789999999999987644 3468899999999999874 1248999
Q ss_pred EEeChhH-HHHHHHHHhCCccccEEEEEccccCCCCCChh---hhhHhhhc---------ch----HHHHH------HHH
Q 021765 169 VGHSSGG-ACVSYALEHFPQKISKAIFLCATMVSDGQRPF---DVFAEELG---------SA----ERFMQ------ESQ 225 (308)
Q Consensus 169 vGhS~GG-~~a~~~a~~~p~~v~~lVli~~~~~~~g~~~~---~~~~~~~~---------~~----~~~~~------~~~ 225 (308)
+|||||| .+++..+...|+.+.++|+++..+...+.+.. +.|..... .. +.+.. ..+
T Consensus 128 ~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~ 207 (315)
T KOG2382|consen 128 LGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQ 207 (315)
T ss_pred cccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHH
Confidence 9999999 67777788899999999999877643332221 11211100 00 00100 012
Q ss_pred HHHhcCC--CCCCCcccccCHHHHHHHhcC--C-CchhhhhcccCCCCCccchhhhcccccccchh
Q 021765 226 FLIYGNG--KDKPPTGFMFEKQQMKGLYFN--Q-SPSKVWYSSSLSFPIKQFLWFYQFAESLTSAY 286 (308)
Q Consensus 226 ~~l~~~~--~~~~~~~~~~~~~~l~~~~~~--~-~~~~~~~l~~~~~p~~~~l~i~G~~D~~vp~~ 286 (308)
+.+.... .......+......+.+.+-. + ..+.+.+......| ++++.|..+..+|..
T Consensus 208 fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~p---vlfi~g~~S~fv~~~ 270 (315)
T KOG2382|consen 208 FILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGP---VLFIKGLQSKFVPDE 270 (315)
T ss_pred HHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccc---eeEEecCCCCCcChh
Confidence 2222222 222333455555555555433 1 12222222555667 999999999988864
No 76
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.22 E-value=8.4e-11 Score=85.22 Aligned_cols=64 Identities=20% Similarity=0.323 Sum_probs=58.5
Q ss_pred ceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHH
Q 021765 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLE 158 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~ 158 (308)
+.+|+++||++.....|..+++.|.++||.|+++|++|||.|.+......+++++++|+..+++
T Consensus 16 k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 16 KAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 6799999999999999999999999999999999999999999766667799999999988763
No 77
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.22 E-value=8.2e-11 Score=115.75 Aligned_cols=121 Identities=14% Similarity=0.023 Sum_probs=83.6
Q ss_pred eccCCeeeE--EEec--CCCceEEEEeCCCCCChh---HHH-HHHHHHHHCCCeEEEeCCCCCCCCCCCCCCc-CCHHHH
Q 021765 79 SLSNGKQDT--NILE--NIQYKKFVLIHGEGFGAW---CWY-KTVASLEEVGLIPTALDLKGSGIDLSDTNSV-TTLAEY 149 (308)
Q Consensus 79 ~~~~~~~~~--~~~~--~~~~~~vvllHG~~~~~~---~~~-~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~-~~~~~~ 149 (308)
++.+|..+. ++.. .+..|+||++||++.... .+. .....|.++||.|+++|+||+|.|.+..... ....++
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~~~D 81 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGSDEAAD 81 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecCcccchH
Confidence 344555554 2332 234689999999987653 222 3456788899999999999999998643222 222333
Q ss_pred HHHHHHHHHHcCC-CCcEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 150 SKPLLDYLENLLE-DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 150 ~~~l~~~l~~l~~-~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
+.++.+++..... +.+|.++|||+||.+++.++..+|..++++|..++..
T Consensus 82 ~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 82 GYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVW 132 (550)
T ss_pred HHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCccc
Confidence 3344444433321 2489999999999999999999999999999887764
No 78
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.21 E-value=5e-10 Score=104.16 Aligned_cols=128 Identities=16% Similarity=0.118 Sum_probs=83.7
Q ss_pred CcceEEEeeccCCeeeEEE-ecCC--CceEEEEeCCCCCChhHHHH-HHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCH
Q 021765 71 SRRRTLSESLSNGKQDTNI-LENI--QYKKFVLIHGEGFGAWCWYK-TVASLEEVGLIPTALDLKGSGIDLSDTNSVTTL 146 (308)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~-~~~~--~~~~vvllHG~~~~~~~~~~-~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~ 146 (308)
...+++.+|..+.....++ ...+ ..|+||++-|+.+...++.. +.++|..+|+.++++|.||.|.|...+.. .+.
T Consensus 163 ~~i~~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~-~D~ 241 (411)
T PF06500_consen 163 YPIEEVEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT-QDS 241 (411)
T ss_dssp SEEEEEEEEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--S-C
T ss_pred CCcEEEEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC-cCH
Confidence 3456777888764333322 2332 34678888888887776554 45678999999999999999998643322 233
Q ss_pred HHHHHHHHHHHHHcCC--CCcEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 147 AEYSKPLLDYLENLLE--DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 147 ~~~~~~l~~~l~~l~~--~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
+.....|.+.+..... ..+|.++|.|+||.++..+|..++.+++++|.+++++
T Consensus 242 ~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~v 296 (411)
T PF06500_consen 242 SRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPV 296 (411)
T ss_dssp CHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---
T ss_pred HHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchH
Confidence 4556677777776642 2489999999999999999988889999999999875
No 79
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.21 E-value=1.5e-10 Score=100.67 Aligned_cols=104 Identities=14% Similarity=0.161 Sum_probs=85.5
Q ss_pred eEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhH
Q 021765 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (308)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG 175 (308)
++|+|+|+.+++...|..+++.|....+.|+.++++|.+.. .....++++.+....+.+......++++|+|||+||
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~---~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDD---EPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTT---SHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCC---CCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccH
Confidence 47999999999999999999999874489999999999722 234468999999888888776655599999999999
Q ss_pred HHHHHHHHhC---CccccEEEEEccccCCC
Q 021765 176 ACVSYALEHF---PQKISKAIFLCATMVSD 202 (308)
Q Consensus 176 ~~a~~~a~~~---p~~v~~lVli~~~~~~~ 202 (308)
.+|..+|.+. ...|..+++++++.+..
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~p~~ 107 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPPPSI 107 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSSTTC
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCCCCc
Confidence 9999988754 44699999999876654
No 80
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.15 E-value=8.9e-10 Score=96.03 Aligned_cols=105 Identities=21% Similarity=0.146 Sum_probs=70.3
Q ss_pred CceEEEEeCCCCCChhHHHHHHHHHHH--------CCCeEEEeCCCCCCCCCCCCCCcCCHHHHHH----HHHHHHHHc-
Q 021765 94 QYKKFVLIHGEGFGAWCWYKTVASLEE--------VGLIPTALDLKGSGIDLSDTNSVTTLAEYSK----PLLDYLENL- 160 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~--------~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~----~l~~~l~~l- 160 (308)
++.+|||+||.+++...|..+...+.+ ..+.++++|+......-. ...+.+..+ .+..+++..
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~----g~~l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH----GRTLQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccc----cccHHHHHHHHHHHHHHHHHhhh
Confidence 568999999999998888877766522 247899999876432111 112222222 233333333
Q ss_pred ---CCCCcEEEEEeChhHHHHHHHHHhCC---ccccEEEEEccccCCC
Q 021765 161 ---LEDEKVILVGHSSGGACVSYALEHFP---QKISKAIFLCATMVSD 202 (308)
Q Consensus 161 ---~~~~~v~lvGhS~GG~~a~~~a~~~p---~~v~~lVli~~~~~~~ 202 (308)
...++|+||||||||.++..++...+ +.|+.+|.++++....
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 22358999999999999988876543 4799999998876443
No 81
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.15 E-value=4e-10 Score=97.18 Aligned_cols=164 Identities=16% Similarity=0.130 Sum_probs=92.7
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCC---CCCcCCHHHHHHHHHHHHHHc----CC-CCcEEEEEeChhHHHHHHHH
Q 021765 111 WYKTVASLEEVGLIPTALDLKGSGIDLSD---TNSVTTLAEYSKPLLDYLENL----LE-DEKVILVGHSSGGACVSYAL 182 (308)
Q Consensus 111 ~~~~~~~L~~~G~~vi~~D~~G~G~S~~~---~~~~~~~~~~~~~l~~~l~~l----~~-~~~v~lvGhS~GG~~a~~~a 182 (308)
|......|+++||.|+.+|+||.+..... ......-...++|+.+.++.+ .. .++|.++|||+||.++..++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 44566788899999999999998743210 001111123334444444333 21 14899999999999999999
Q ss_pred HhCCccccEEEEEccccCCCCCChhhhhHhhhcchHHHHHHHHHHHhcCCCCCCCcccccCHHHHHHHhcCCCchhhhhc
Q 021765 183 EHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKGLYFNQSPSKVWYS 262 (308)
Q Consensus 183 ~~~p~~v~~lVli~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 262 (308)
..+|+.++++|..++............. +.......+..... ..+...... + ...+
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~~----------~~~~~~~~~~~~~~--------~~~~~~~~s----~--~~~~ 138 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTDI----------YTKAEYLEYGDPWD--------NPEFYRELS----P--ISPA 138 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTCC----------HHHGHHHHHSSTTT--------SHHHHHHHH----H--GGGG
T ss_pred cccceeeeeeeccceecchhcccccccc----------cccccccccCccch--------hhhhhhhhc----c--cccc
Confidence 9999999999999887533322111000 11101111111100 122111111 1 1111
Q ss_pred cc--CCCCCccchhhhcccccccchhhchHHHHHhhhhhee
Q 021765 263 SS--LSFPIKQFLWFYQFAESLTSAYVSWKHFWDAIFLGFV 301 (308)
Q Consensus 263 ~~--~~~p~~~~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~ 301 (308)
.. +..| +|++||..|..||...+.+-+-.+...|.+
T Consensus 139 ~~~~~~~P---~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~ 176 (213)
T PF00326_consen 139 DNVQIKPP---VLIIHGENDPRVPPSQSLRLYNALRKAGKP 176 (213)
T ss_dssp GGCGGGSE---EEEEEETTBSSSTTHHHHHHHHHHHHTTSS
T ss_pred ccccCCCC---EEEEccCCCCccCHHHHHHHHHHHHhcCCC
Confidence 22 5556 999999999999999888777777665544
No 82
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.14 E-value=1.5e-09 Score=108.26 Aligned_cols=200 Identities=18% Similarity=0.172 Sum_probs=118.3
Q ss_pred cceEEEeeccCCeeeEEEe--cCC-C----ceEEEEeCCCCCChhH--HHHHHHHHHHCCCeEEEeCCCCCCCCC-----
Q 021765 72 RRRTLSESLSNGKQDTNIL--ENI-Q----YKKFVLIHGEGFGAWC--WYKTVASLEEVGLIPTALDLKGSGIDL----- 137 (308)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~--~~~-~----~~~vvllHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~~G~G~S~----- 137 (308)
.++.+.....+|..+..+. +.+ + -|+||++||....... |....+.|..+||.|+.+++||.+.-.
T Consensus 364 ~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~ 443 (620)
T COG1506 364 EPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFAD 443 (620)
T ss_pred CceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHH
Confidence 3455555566776666433 222 2 2799999998755543 567788999999999999999865421
Q ss_pred --CCCCCcCCHHHHHHHHHHHHHHcCCC--CcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCCCCCChhhhhHhh
Q 021765 138 --SDTNSVTTLAEYSKPLLDYLENLLED--EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEE 213 (308)
Q Consensus 138 --~~~~~~~~~~~~~~~l~~~l~~l~~~--~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~~g~~~~~~~~~~ 213 (308)
........++|..+.+. ++...+.- +++.|.|||+||++++.++.+.| .+++.|...+.... ...+.
T Consensus 444 ~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~-----~~~~~-- 514 (620)
T COG1506 444 AIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDW-----LLYFG-- 514 (620)
T ss_pred hhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchh-----hhhcc--
Confidence 11113335666666555 66665432 48999999999999999999887 67777766654311 11111
Q ss_pred hcchHHHHHHHHHHHhcCCCCCCCcccccCHHHHHHHhcCCCchhhhhcccCCCCCccchhhhcccccccchhhchHHHH
Q 021765 214 LGSAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKGLYFNQSPSKVWYSSSLSFPIKQFLWFYQFAESLTSAYVSWKHFW 293 (308)
Q Consensus 214 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~p~~~~l~i~G~~D~~vp~~~~~~~~~ 293 (308)
.....++...+... ..++. ..+ .+...+| ......++.| +|+|||..|..||...+.+-+-
T Consensus 515 -~~~~~~~~~~~~~~-----~~~~~----~~~----~~~~~sp--~~~~~~i~~P---~LliHG~~D~~v~~~q~~~~~~ 575 (620)
T COG1506 515 -ESTEGLRFDPEENG-----GGPPE----DRE----KYEDRSP--IFYADNIKTP---LLLIHGEEDDRVPIEQAEQLVD 575 (620)
T ss_pred -ccchhhcCCHHHhC-----CCccc----ChH----HHHhcCh--hhhhcccCCC---EEEEeecCCccCChHHHHHHHH
Confidence 11111111111000 00000 011 1111222 2334456677 9999999999999998876544
Q ss_pred Hhhhhh
Q 021765 294 DAIFLG 299 (308)
Q Consensus 294 ~~~~~~ 299 (308)
.+...|
T Consensus 576 aL~~~g 581 (620)
T COG1506 576 ALKRKG 581 (620)
T ss_pred HHHHcC
Confidence 444333
No 83
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.11 E-value=6.6e-09 Score=93.19 Aligned_cols=106 Identities=19% Similarity=0.230 Sum_probs=72.6
Q ss_pred CCceEEEEeCCCCCChh-HH-HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcC--CHHHHHHHHHHHHHHcCCCCcEEE
Q 021765 93 IQYKKFVLIHGEGFGAW-CW-YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVT--TLAEYSKPLLDYLENLLEDEKVIL 168 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~-~~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~--~~~~~~~~l~~~l~~l~~~~~v~l 168 (308)
...|.||++||+.++.. .| ..+.+.+.++||.|+++++|||+.+.......+ ...+++..+.+.++......++..
T Consensus 73 ~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~a 152 (345)
T COG0429 73 AKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYA 152 (345)
T ss_pred cCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEE
Confidence 34689999999977654 33 478889999999999999999998764332211 222444445555555454569999
Q ss_pred EEeChhH-HHHHHHHHhCCc-cccEEEEEccc
Q 021765 169 VGHSSGG-ACVSYALEHFPQ-KISKAIFLCAT 198 (308)
Q Consensus 169 vGhS~GG-~~a~~~a~~~p~-~v~~lVli~~~ 198 (308)
+|.|+|| +++.+++++-.+ .+.+.+.++.+
T Consensus 153 vG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P 184 (345)
T COG0429 153 VGFSLGGNMLANYLGEEGDDLPLDAAVAVSAP 184 (345)
T ss_pred EEecccHHHHHHHHHhhccCcccceeeeeeCH
Confidence 9999999 566666654322 45666666554
No 84
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.07 E-value=3.2e-09 Score=94.93 Aligned_cols=114 Identities=21% Similarity=0.298 Sum_probs=95.6
Q ss_pred ceEEEEeCCCCCChhHHHHHHHHHHHC---CCeEEEeCCCCCCCCCCC-----CCCcCCHHHHHHHHHHHHHHcC-----
Q 021765 95 YKKFVLIHGEGFGAWCWYKTVASLEEV---GLIPTALDLKGSGIDLSD-----TNSVTTLAEYSKPLLDYLENLL----- 161 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~---G~~vi~~D~~G~G~S~~~-----~~~~~~~~~~~~~l~~~l~~l~----- 161 (308)
+..||+++|..|-.+.|..+++.|.++ .+.|+++.+.||..+... ....+++++.++...++++.+-
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 357999999999999999999888754 699999999999877654 3467799999998888887653
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCC---ccccEEEEEccccCCCCCChhh
Q 021765 162 EDEKVILVGHSSGGACVSYALEHFP---QKISKAIFLCATMVSDGQRPFD 208 (308)
Q Consensus 162 ~~~~v~lvGhS~GG~~a~~~a~~~p---~~v~~lVli~~~~~~~g~~~~~ 208 (308)
...+++|+|||.|+++++.++.+++ .+|.+++++-|.....+.+...
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~Sp~G 131 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAKSPNG 131 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccCCchh
Confidence 3358999999999999999999998 7899999999998776665544
No 85
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.01 E-value=2.6e-09 Score=92.47 Aligned_cols=111 Identities=15% Similarity=0.172 Sum_probs=65.6
Q ss_pred cCCCceEEEEeCCCCCChhHHHHHHH-HHHHCCCeEEEeCCCC------CCC---CCCC-----CCC---cCCHHHHHHH
Q 021765 91 ENIQYKKFVLIHGEGFGAWCWYKTVA-SLEEVGLIPTALDLKG------SGI---DLSD-----TNS---VTTLAEYSKP 152 (308)
Q Consensus 91 ~~~~~~~vvllHG~~~~~~~~~~~~~-~L~~~G~~vi~~D~~G------~G~---S~~~-----~~~---~~~~~~~~~~ 152 (308)
.....++||++||+|.+...|..+.. .+......++.++-|. .|. +..+ ... ...+.+.++.
T Consensus 10 ~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 45567899999999999977766555 2223346677665441 222 2111 111 1223344445
Q ss_pred HHHHHHHc---CC-CCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCC
Q 021765 153 LLDYLENL---LE-DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (308)
Q Consensus 153 l~~~l~~l---~~-~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~ 201 (308)
+.++++.. +. .++|+|.|+|+||.+++.++..+|+.+.++|.+++..+.
T Consensus 90 l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~ 142 (216)
T PF02230_consen 90 LDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPP 142 (216)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TT
T ss_pred HHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccc
Confidence 55555532 22 248999999999999999999999999999999988643
No 86
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.00 E-value=2.4e-08 Score=92.48 Aligned_cols=106 Identities=16% Similarity=0.207 Sum_probs=72.3
Q ss_pred CCceEEEEeCCCCCChh-HH-HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCc--CCHHHHHHHHHHHHHHcCCCCcEEE
Q 021765 93 IQYKKFVLIHGEGFGAW-CW-YKTVASLEEVGLIPTALDLKGSGIDLSDTNSV--TTLAEYSKPLLDYLENLLEDEKVIL 168 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~-~~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~--~~~~~~~~~l~~~l~~l~~~~~v~l 168 (308)
...|+||++||+.+++. .+ ..++..+.++||+|++++.||+|.+.-..... ....++.+.+.+.+++.....++..
T Consensus 123 ~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~a 202 (409)
T KOG1838|consen 123 GTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFA 202 (409)
T ss_pred CCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEE
Confidence 34589999999977655 33 47788888899999999999999886433321 2333444444555554444458999
Q ss_pred EEeChhHHHHHHHHHhCCc--cccEEEEEccc
Q 021765 169 VGHSSGGACVSYALEHFPQ--KISKAIFLCAT 198 (308)
Q Consensus 169 vGhS~GG~~a~~~a~~~p~--~v~~lVli~~~ 198 (308)
+|.||||.+...+..+-.+ .+.+.+.++.+
T Consensus 203 vG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~P 234 (409)
T KOG1838|consen 203 VGFSMGGNILTNYLGEEGDNTPLIAAVAVCNP 234 (409)
T ss_pred EEecchHHHHHHHhhhccCCCCceeEEEEecc
Confidence 9999999988877655333 24455544443
No 87
>PRK10162 acetyl esterase; Provisional
Probab=98.96 E-value=1.5e-08 Score=93.05 Aligned_cols=122 Identities=11% Similarity=0.039 Sum_probs=78.6
Q ss_pred EEEeeccCC-eeeEEEec-CCCceEEEEeCCCC---CChhHHHHHHHHHHH-CCCeEEEeCCCCCCCCCCCCCCcCCHHH
Q 021765 75 TLSESLSNG-KQDTNILE-NIQYKKFVLIHGEG---FGAWCWYKTVASLEE-VGLIPTALDLKGSGIDLSDTNSVTTLAE 148 (308)
Q Consensus 75 ~~~~~~~~~-~~~~~~~~-~~~~~~vvllHG~~---~~~~~~~~~~~~L~~-~G~~vi~~D~~G~G~S~~~~~~~~~~~~ 148 (308)
+..++..+| ..+.+|.. ....|+||++||.+ ++...|..+...|+. .|+.|+.+|+|.......+ ..++|
T Consensus 59 ~~~i~~~~g~i~~~~y~P~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p----~~~~D 134 (318)
T PRK10162 59 AYMVPTPYGQVETRLYYPQPDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFP----QAIEE 134 (318)
T ss_pred EEEEecCCCceEEEEECCCCCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCC----CcHHH
Confidence 344443344 23334443 33458999999976 556678888888876 5999999999965432211 13333
Q ss_pred HH---HHHHHHHHHcCCC-CcEEEEEeChhHHHHHHHHHhC------CccccEEEEEccccC
Q 021765 149 YS---KPLLDYLENLLED-EKVILVGHSSGGACVSYALEHF------PQKISKAIFLCATMV 200 (308)
Q Consensus 149 ~~---~~l~~~l~~l~~~-~~v~lvGhS~GG~~a~~~a~~~------p~~v~~lVli~~~~~ 200 (308)
.. +.+.+..+.++.+ ++++|+|+|+||.+++.++... +.++.++|++.+...
T Consensus 135 ~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 135 IVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred HHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 32 2233333344432 4899999999999998887643 356889999987653
No 88
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.95 E-value=1.2e-08 Score=98.50 Aligned_cols=104 Identities=12% Similarity=0.108 Sum_probs=83.0
Q ss_pred ceEEEEeCCCCCChhHH-----HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcC---CCCcE
Q 021765 95 YKKFVLIHGEGFGAWCW-----YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL---EDEKV 166 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~~-----~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~---~~~~v 166 (308)
++|||+++.+-....+| ..++++|.++||.|+.+|+++-+... ...+++++++.+.+.++... ..+++
T Consensus 215 ~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~----r~~~ldDYv~~i~~Ald~V~~~tG~~~v 290 (560)
T TIGR01839 215 ARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH----REWGLSTYVDALKEAVDAVRAITGSRDL 290 (560)
T ss_pred CCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh----cCCCHHHHHHHHHHHHHHHHHhcCCCCe
Confidence 57999999998777777 47999999999999999999866443 33578888877777666652 22489
Q ss_pred EEEEeChhHHHHHH----HHHhCCc-cccEEEEEccccCCC
Q 021765 167 ILVGHSSGGACVSY----ALEHFPQ-KISKAIFLCATMVSD 202 (308)
Q Consensus 167 ~lvGhS~GG~~a~~----~a~~~p~-~v~~lVli~~~~~~~ 202 (308)
.++|||+||.++.. +++.+++ +|+.++++.++....
T Consensus 291 nl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 291 NLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred eEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccC
Confidence 99999999998875 6777775 799999998877654
No 89
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.93 E-value=1.1e-08 Score=90.20 Aligned_cols=101 Identities=17% Similarity=0.190 Sum_probs=87.8
Q ss_pred eEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhH
Q 021765 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (308)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG 175 (308)
|+++++|+.++...+|..+...|... ..|+.++.||.+.-. ....++++.++...+.|.......+++|+|||+||
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~---~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG 76 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGE---QPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGG 76 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCcccccc---cccCCHHHHHHHHHHHHHHhCCCCCEEEEeecccc
Confidence 58999999999999999999999886 999999999998522 24458999999988888888776799999999999
Q ss_pred HHHHHHHHh---CCccccEEEEEccccC
Q 021765 176 ACVSYALEH---FPQKISKAIFLCATMV 200 (308)
Q Consensus 176 ~~a~~~a~~---~p~~v~~lVli~~~~~ 200 (308)
.+|..+|.+ ..+.|..+++++++.+
T Consensus 77 ~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 77 AVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999988875 3457999999999987
No 90
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.91 E-value=1.3e-08 Score=87.74 Aligned_cols=106 Identities=16% Similarity=0.098 Sum_probs=82.2
Q ss_pred CCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeC
Q 021765 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (308)
..+..++++|=.|+++..|..|...|.. .+.++++++||+|.-...+ ...+++..++.+...+.....+.++.++|||
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr~W~~~lp~-~iel~avqlPGR~~r~~ep-~~~di~~Lad~la~el~~~~~d~P~alfGHS 82 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFRSWSRRLPA-DIELLAVQLPGRGDRFGEP-LLTDIESLADELANELLPPLLDAPFALFGHS 82 (244)
T ss_pred CCCceEEEecCCCCCHHHHHHHHhhCCc-hhheeeecCCCcccccCCc-ccccHHHHHHHHHHHhccccCCCCeeecccc
Confidence 3456899999999999999999998877 4999999999998654333 4568899999888877732233489999999
Q ss_pred hhHHHHHHHHHhCC---ccccEEEEEccccC
Q 021765 173 SGGACVSYALEHFP---QKISKAIFLCATMV 200 (308)
Q Consensus 173 ~GG~~a~~~a~~~p---~~v~~lVli~~~~~ 200 (308)
|||++|..+|.++. ..+.++++.+...|
T Consensus 83 mGa~lAfEvArrl~~~g~~p~~lfisg~~aP 113 (244)
T COG3208 83 MGAMLAFEVARRLERAGLPPRALFISGCRAP 113 (244)
T ss_pred hhHHHHHHHHHHHHHcCCCcceEEEecCCCC
Confidence 99999999987642 23566666666555
No 91
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.90 E-value=1.8e-08 Score=87.21 Aligned_cols=103 Identities=19% Similarity=0.110 Sum_probs=67.9
Q ss_pred CceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCC-CCCCCCC-cC--------CHHHHHHHHHHHHHHcCC-
Q 021765 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGI-DLSDTNS-VT--------TLAEYSKPLLDYLENLLE- 162 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~-S~~~~~~-~~--------~~~~~~~~l~~~l~~l~~- 162 (308)
+.|.||++|++.+-......+++.|+++||.|+++|+.+-.. ....... .. ..+...+++...++.+..
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 578999999998887777789999999999999999864433 1111100 00 112334455444444422
Q ss_pred ----CCcEEEEEeChhHHHHHHHHHhCCccccEEEEEcc
Q 021765 163 ----DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCA 197 (308)
Q Consensus 163 ----~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~ 197 (308)
.++|.++|+|+||.+++.++... ..++++|..-+
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg 130 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYG 130 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcC
Confidence 24899999999999999998876 57898888766
No 92
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.88 E-value=1.7e-08 Score=88.68 Aligned_cols=102 Identities=22% Similarity=0.193 Sum_probs=73.7
Q ss_pred CCCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHH-----c------
Q 021765 92 NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN-----L------ 160 (308)
Q Consensus 92 ~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~-----l------ 160 (308)
.+.-|+|||+||+......|..+.++++.+||-|+.+|+...+... .. .-.+.+..+.+++.. +
T Consensus 14 ~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~----~~-~~~~~~~~vi~Wl~~~L~~~l~~~v~~ 88 (259)
T PF12740_consen 14 AGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPD----DT-DEVASAAEVIDWLAKGLESKLPLGVKP 88 (259)
T ss_pred CCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCC----cc-hhHHHHHHHHHHHHhcchhhccccccc
Confidence 3455899999999977777789999999999999999976544311 11 112222333333222 1
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhC-----CccccEEEEEcccc
Q 021765 161 LEDEKVILVGHSSGGACVSYALEHF-----PQKISKAIFLCATM 199 (308)
Q Consensus 161 ~~~~~v~lvGhS~GG~~a~~~a~~~-----p~~v~~lVli~~~~ 199 (308)
+. .++.|.|||-||-++..++..+ +.+++++|+++|.-
T Consensus 89 D~-s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 89 DF-SKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred cc-cceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 12 4899999999999999888877 45899999999975
No 93
>COG0400 Predicted esterase [General function prediction only]
Probab=98.88 E-value=1.6e-08 Score=86.58 Aligned_cols=110 Identities=16% Similarity=0.120 Sum_probs=71.8
Q ss_pred CCCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCC--CCC----CCCCCC--CcCCHH----HHHHHHHHHHHH
Q 021765 92 NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKG--SGI----DLSDTN--SVTTLA----EYSKPLLDYLEN 159 (308)
Q Consensus 92 ~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G--~G~----S~~~~~--~~~~~~----~~~~~l~~~l~~ 159 (308)
++..|+||++||+|++...+.++.+.+..+ +.++.+.-+- .|. +..+.. ....+. ..++.+....++
T Consensus 15 ~p~~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 15 DPAAPLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCCCcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 445678999999999999888866666553 6666553221 110 000000 111222 222333333444
Q ss_pred cCCC-CcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCCC
Q 021765 160 LLED-EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSD 202 (308)
Q Consensus 160 l~~~-~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~~ 202 (308)
.+.+ ++++++|+|.|+.+++.++..+|+.++++|++++..+.+
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~ 137 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLE 137 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCC
Confidence 4442 489999999999999999999999999999999887654
No 94
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.85 E-value=1.9e-08 Score=108.35 Aligned_cols=104 Identities=14% Similarity=0.030 Sum_probs=88.1
Q ss_pred CCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeC
Q 021765 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (308)
+++++++++||++++...|..+.+.|.. ++.|++++.+|++... ....++++.++++.+.++.+....+++++|||
T Consensus 1066 ~~~~~l~~lh~~~g~~~~~~~l~~~l~~-~~~v~~~~~~g~~~~~---~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S 1141 (1296)
T PRK10252 1066 GDGPTLFCFHPASGFAWQFSVLSRYLDP-QWSIYGIQSPRPDGPM---QTATSLDEVCEAHLATLLEQQPHGPYHLLGYS 1141 (1296)
T ss_pred CCCCCeEEecCCCCchHHHHHHHHhcCC-CCcEEEEECCCCCCCC---CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 4457899999999999999999999976 5999999999998542 23468999999999988876554589999999
Q ss_pred hhHHHHHHHHHh---CCccccEEEEEccccC
Q 021765 173 SGGACVSYALEH---FPQKISKAIFLCATMV 200 (308)
Q Consensus 173 ~GG~~a~~~a~~---~p~~v~~lVli~~~~~ 200 (308)
|||.++..++.+ .++++..++++++..+
T Consensus 1142 ~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~~ 1172 (1296)
T PRK10252 1142 LGGTLAQGIAARLRARGEEVAFLGLLDTWPP 1172 (1296)
T ss_pred hhhHHHHHHHHHHHHcCCceeEEEEecCCCc
Confidence 999999999885 5778999999987654
No 95
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.82 E-value=5.1e-08 Score=80.92 Aligned_cols=105 Identities=16% Similarity=0.126 Sum_probs=79.2
Q ss_pred CCceEEEEeCC-----CCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcE-
Q 021765 93 IQYKKFVLIHG-----EGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKV- 166 (308)
Q Consensus 93 ~~~~~vvllHG-----~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v- 166 (308)
...|..|++|- ...+...-..+...|.++||.++.||+||.|.|.+.......-.+++..+.++++....+.+.
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~~ 105 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSASC 105 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchhh
Confidence 34567777774 333444566788899999999999999999999987766656667777788888887665344
Q ss_pred EEEEeChhHHHHHHHHHhCCccccEEEEEccc
Q 021765 167 ILVGHSSGGACVSYALEHFPQKISKAIFLCAT 198 (308)
Q Consensus 167 ~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~ 198 (308)
.|.|+|+|+++++.++.+.|+ ....|.+.+.
T Consensus 106 ~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~ 136 (210)
T COG2945 106 WLAGFSFGAYIAMQLAMRRPE-ILVFISILPP 136 (210)
T ss_pred hhcccchHHHHHHHHHHhccc-ccceeeccCC
Confidence 688999999999999998875 4444444444
No 96
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.80 E-value=2e-08 Score=90.84 Aligned_cols=117 Identities=17% Similarity=0.159 Sum_probs=96.6
Q ss_pred ccCCeeeEEEe-cC------CCceEEEEeCCCCCChhHHHHHHHHHHHC---C------CeEEEeCCCCCCCCCCCCCCc
Q 021765 80 LSNGKQDTNIL-EN------IQYKKFVLIHGEGFGAWCWYKTVASLEEV---G------LIPTALDLKGSGIDLSDTNSV 143 (308)
Q Consensus 80 ~~~~~~~~~~~-~~------~~~~~vvllHG~~~~~~~~~~~~~~L~~~---G------~~vi~~D~~G~G~S~~~~~~~ 143 (308)
...|.+++... .. +.-.|++++|||.++-+.|..+++.|.+. | |.||++.+||+|.|+.+....
T Consensus 130 eIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~G 209 (469)
T KOG2565|consen 130 EIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTG 209 (469)
T ss_pred hhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCC
Confidence 45676666432 11 12248999999999999999999999764 2 789999999999999887777
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEcc
Q 021765 144 TTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCA 197 (308)
Q Consensus 144 ~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~ 197 (308)
.+..+.+..+..++-.++.+ +..|-|-.+|..++..++..+|++|.++=+--+
T Consensus 210 Fn~~a~ArvmrkLMlRLg~n-kffiqGgDwGSiI~snlasLyPenV~GlHlnm~ 262 (469)
T KOG2565|consen 210 FNAAATARVMRKLMLRLGYN-KFFIQGGDWGSIIGSNLASLYPENVLGLHLNMC 262 (469)
T ss_pred ccHHHHHHHHHHHHHHhCcc-eeEeecCchHHHHHHHHHhhcchhhhHhhhccc
Confidence 78888888888999999987 999999999999999999999999988755333
No 97
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.80 E-value=3.5e-08 Score=88.39 Aligned_cols=108 Identities=21% Similarity=0.200 Sum_probs=67.7
Q ss_pred CceEEEEeCCCCCChh---HHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcC-------CC
Q 021765 94 QYKKFVLIHGEGFGAW---CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL-------ED 163 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~---~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~-------~~ 163 (308)
....||||.|++.+.. ....+++.|...||.|+-+.+...- ......++++++++|.++++.+. ..
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy----~G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~ 107 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSY----SGWGTSSLDRDVEEIAQLVEYLRSEKGGHFGR 107 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGB----TTS-S--HHHHHHHHHHHHHHHHHHS------
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCcc----CCcCcchhhhHHHHHHHHHHHHHHhhccccCC
Confidence 4568999999987654 3567888998889999999876311 11223478888888887776541 12
Q ss_pred CcEEEEEeChhHHHHHHHHHhCC-----ccccEEEEEccccCCCCCC
Q 021765 164 EKVILVGHSSGGACVSYALEHFP-----QKISKAIFLCATMVSDGQR 205 (308)
Q Consensus 164 ~~v~lvGhS~GG~~a~~~a~~~p-----~~v~~lVli~~~~~~~g~~ 205 (308)
++|+|+|||-|..-+++++.... ..|+++|+-+|....+...
T Consensus 108 ~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~ 154 (303)
T PF08538_consen 108 EKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAIL 154 (303)
T ss_dssp S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTT
T ss_pred ccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhh
Confidence 48999999999998888877542 5699999999987665443
No 98
>PRK10115 protease 2; Provisional
Probab=98.79 E-value=1.1e-07 Score=95.69 Aligned_cols=204 Identities=15% Similarity=0.089 Sum_probs=122.6
Q ss_pred ceEEEeeccCCeeeEE---Eec----CCCceEEEEeCCCCCChh--HHHHHHHHHHHCCCeEEEeCCCCCCCCCC---C-
Q 021765 73 RRTLSESLSNGKQDTN---ILE----NIQYKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDLS---D- 139 (308)
Q Consensus 73 ~~~~~~~~~~~~~~~~---~~~----~~~~~~vvllHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~---~- 139 (308)
.+.+..+..+|..+.. +.. ++..|+||++||..+... .|......|.++||.|+.++.||.|.-.. .
T Consensus 416 ~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~ 495 (686)
T PRK10115 416 SEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYED 495 (686)
T ss_pred EEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHh
Confidence 4445555677777663 212 344689999999776654 46666678889999999999998654321 1
Q ss_pred ---CCCcCCHHHHHHHHHHHHHHcC-CCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCCCCCChhhhhH-hhh
Q 021765 140 ---TNSVTTLAEYSKPLLDYLENLL-EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFA-EEL 214 (308)
Q Consensus 140 ---~~~~~~~~~~~~~l~~~l~~l~-~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~~g~~~~~~~~-~~~ 214 (308)
.....++.|+++.+..+++.-- ..+++.+.|.|.||+++..++.++|+.++++|...|..-.. ..+. +..
T Consensus 496 g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~-----~~~~~~~~ 570 (686)
T PRK10115 496 GKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVV-----TTMLDESI 570 (686)
T ss_pred hhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHh-----hhcccCCC
Confidence 1123467777766665554421 12589999999999999999999999999999887764211 0000 010
Q ss_pred cchHHHHHHHHHHHhcCCCCCCCcccccCHHHHHHHhcCCCchhhhhcccCCCCCccchhhhcccccccchhhchHHHHH
Q 021765 215 GSAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKGLYFNQSPSKVWYSSSLSFPIKQFLWFYQFAESLTSAYVSWKHFWD 294 (308)
Q Consensus 215 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~p~~~~l~i~G~~D~~vp~~~~~~~~~~ 294 (308)
.....+.. .+++.. .++ ....+...+|-..+ ..+..| ++|+++|.+|.-||...+.+-+-.
T Consensus 571 p~~~~~~~-----e~G~p~---------~~~-~~~~l~~~SP~~~v--~~~~~P--~lLi~~g~~D~RV~~~~~~k~~a~ 631 (686)
T PRK10115 571 PLTTGEFE-----EWGNPQ---------DPQ-YYEYMKSYSPYDNV--TAQAYP--HLLVTTGLHDSQVQYWEPAKWVAK 631 (686)
T ss_pred CCChhHHH-----HhCCCC---------CHH-HHHHHHHcCchhcc--CccCCC--ceeEEecCCCCCcCchHHHHHHHH
Confidence 10000111 122111 111 11222223332222 234444 245679999999999999877666
Q ss_pred hhhhhe
Q 021765 295 AIFLGF 300 (308)
Q Consensus 295 ~~~~~~ 300 (308)
+...+-
T Consensus 632 Lr~~~~ 637 (686)
T PRK10115 632 LRELKT 637 (686)
T ss_pred HHhcCC
Confidence 665443
No 99
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.79 E-value=6.3e-09 Score=89.88 Aligned_cols=87 Identities=26% Similarity=0.337 Sum_probs=52.5
Q ss_pred eEEEEeCCCCC-ChhHHHHHHHHHHHCCCe---EEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHc----CCCCcEE
Q 021765 96 KKFVLIHGEGF-GAWCWYKTVASLEEVGLI---PTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL----LEDEKVI 167 (308)
Q Consensus 96 ~~vvllHG~~~-~~~~~~~~~~~L~~~G~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~v~ 167 (308)
.||||+||.++ ....|..+++.|.++||. |+++++-......... ......+.++.+.++++.. +. +|.
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~-~~~~~~~~~~~l~~fI~~Vl~~TGa--kVD 78 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQ-NAHMSCESAKQLRAFIDAVLAYTGA--KVD 78 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHH-HHHB-HHHHHHHHHHHHHHHHHHT----EE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCccc-ccccchhhHHHHHHHHHHHHHhhCC--EEE
Confidence 58999999998 567899999999999999 8999985433211100 0011223345555555443 43 899
Q ss_pred EEEeChhHHHHHHHHHhC
Q 021765 168 LVGHSSGGACVSYALEHF 185 (308)
Q Consensus 168 lvGhS~GG~~a~~~a~~~ 185 (308)
||||||||.++.++....
T Consensus 79 IVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 79 IVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEEETCHHHHHHHHHHHC
T ss_pred EEEcCCcCHHHHHHHHHc
Confidence 999999999999998754
No 100
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.78 E-value=2.7e-08 Score=83.04 Aligned_cols=89 Identities=24% Similarity=0.288 Sum_probs=63.8
Q ss_pred EEEeCCCCCChh-HHHHHHH-HHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhH
Q 021765 98 FVLIHGEGFGAW-CWYKTVA-SLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (308)
Q Consensus 98 vvllHG~~~~~~-~~~~~~~-~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG 175 (308)
|+++||++++.. .|..+.+ .|... ++|..+++ ...+.+++...+.+.+.... ++++|||||+|+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~-----------~~P~~~~W~~~l~~~i~~~~--~~~ilVaHSLGc 66 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW-----------DNPDLDEWVQALDQAIDAID--EPTILVAHSLGC 66 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC-------------TS--HHHHHHHHHHCCHC-T--TTEEEEEETHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc-----------CCCCHHHHHHHHHHHHhhcC--CCeEEEEeCHHH
Confidence 689999988754 6876554 66655 77777665 22378899988888777653 379999999999
Q ss_pred HHHHHHH-HhCCccccEEEEEccccC
Q 021765 176 ACVSYAL-EHFPQKISKAIFLCATMV 200 (308)
Q Consensus 176 ~~a~~~a-~~~p~~v~~lVli~~~~~ 200 (308)
..++.++ .....+|.++++++++-+
T Consensus 67 ~~~l~~l~~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 67 LTALRWLAEQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp HHHHHHHHHTCCSSEEEEEEES--SC
T ss_pred HHHHHHHhhcccccccEEEEEcCCCc
Confidence 9999998 777889999999999854
No 101
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.76 E-value=1.5e-07 Score=81.50 Aligned_cols=109 Identities=15% Similarity=0.084 Sum_probs=68.9
Q ss_pred CceEEEEeCCCCCChhHHHH---HHHHHHHCCCeEEEeCCCCCCCC-------CC-CCCCcCCHHHHHHHHHHHHHHcCC
Q 021765 94 QYKKFVLIHGEGFGAWCWYK---TVASLEEVGLIPTALDLKGSGID-------LS-DTNSVTTLAEYSKPLLDYLENLLE 162 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~---~~~~L~~~G~~vi~~D~~G~G~S-------~~-~~~~~~~~~~~~~~l~~~l~~l~~ 162 (308)
..|.||++||.+.+.+.+.. +.+.-.++||-|+.++-...... .. ......+.......+.++..+..+
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~i 94 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNI 94 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhccc
Confidence 35799999999999987754 23333445888888875321100 00 000111111122222233334443
Q ss_pred C-CcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCCC
Q 021765 163 D-EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSD 202 (308)
Q Consensus 163 ~-~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~~ 202 (308)
+ .+|.+.|+|.||.++..++..+|+.+.++..+++.+...
T Consensus 95 D~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~ 135 (220)
T PF10503_consen 95 DPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGC 135 (220)
T ss_pred CCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccccc
Confidence 2 599999999999999999999999999988888775443
No 102
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.71 E-value=7.7e-08 Score=91.51 Aligned_cols=89 Identities=22% Similarity=0.258 Sum_probs=67.1
Q ss_pred CChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHH----HHcCCCCcEEEEEeChhHHHHHHH
Q 021765 106 FGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYL----ENLLEDEKVILVGHSSGGACVSYA 181 (308)
Q Consensus 106 ~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l----~~l~~~~~v~lvGhS~GG~~a~~~ 181 (308)
.....|..+++.|.+.||.+ ..|++|+|.+..... ...++.+++.+.+ +..+.. +++|+||||||.++..+
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~---~~~~~~~~Lk~lIe~~~~~~g~~-kV~LVGHSMGGlva~~f 179 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSN---RLPETMDGLKKKLETVYKASGGK-KVNIISHSMGGLLVKCF 179 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccc---cHHHHHHHHHHHHHHHHHHcCCC-CEEEEEECHhHHHHHHH
Confidence 45678999999999999866 889999998765432 2334444444444 444444 99999999999999999
Q ss_pred HHhCCcc----ccEEEEEcccc
Q 021765 182 LEHFPQK----ISKAIFLCATM 199 (308)
Q Consensus 182 a~~~p~~----v~~lVli~~~~ 199 (308)
+..+|+. |+++|.++++.
T Consensus 180 l~~~p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 180 MSLHSDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred HHHCCHhHHhHhccEEEECCCC
Confidence 9888763 78999997764
No 103
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.69 E-value=1.6e-08 Score=92.91 Aligned_cols=110 Identities=19% Similarity=0.179 Sum_probs=64.9
Q ss_pred CCCceEEEEeCCCCCCh--hHHH-HHHHHHHH---CCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHc----C
Q 021765 92 NIQYKKFVLIHGEGFGA--WCWY-KTVASLEE---VGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL----L 161 (308)
Q Consensus 92 ~~~~~~vvllHG~~~~~--~~~~-~~~~~L~~---~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~ 161 (308)
+.+.|++|++|||.++. ..|. .+.+.+.. .+++|+++||........ ...........+.+..+|..+ +
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y-~~a~~n~~~vg~~la~~l~~L~~~~g 146 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNY-PQAVANTRLVGRQLAKFLSFLINNFG 146 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-H-HHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccc-cchhhhHHHHHHHHHHHHHHHHhhcC
Confidence 45789999999999887 3565 45554443 479999999953211000 000011222233333344333 2
Q ss_pred C-CCcEEEEEeChhHHHHHHHHHhCCc--cccEEEEEccccCCC
Q 021765 162 E-DEKVILVGHSSGGACVSYALEHFPQ--KISKAIFLCATMVSD 202 (308)
Q Consensus 162 ~-~~~v~lvGhS~GG~~a~~~a~~~p~--~v~~lVli~~~~~~~ 202 (308)
. .++++|||||+||.+|..++..... +|.+++.++|+.|.-
T Consensus 147 ~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F 190 (331)
T PF00151_consen 147 VPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLF 190 (331)
T ss_dssp --GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTT
T ss_pred CChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccc
Confidence 2 1599999999999999999998877 899999999998753
No 104
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.65 E-value=2.3e-07 Score=83.15 Aligned_cols=108 Identities=15% Similarity=0.084 Sum_probs=73.7
Q ss_pred CCceEEEEeCCCCCCh-hHHHHH---------HHHHHHCCCeEEEeCCCCCCCCCCCCCC-cCCHHHHHHHHHHHHHHcC
Q 021765 93 IQYKKFVLIHGEGFGA-WCWYKT---------VASLEEVGLIPTALDLKGSGIDLSDTNS-VTTLAEYSKPLLDYLENLL 161 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~-~~~~~~---------~~~L~~~G~~vi~~D~~G~G~S~~~~~~-~~~~~~~~~~l~~~l~~l~ 161 (308)
+.-|+||..|+++... ...... ...+.++||.|+..|.||.|.|.+.... ...-.++..++++++....
T Consensus 18 ~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~~Qp 97 (272)
T PF02129_consen 18 GPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIAAQP 97 (272)
T ss_dssp SSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHHHCT
T ss_pred CcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCChhHHHHHHHHHHHHHhCC
Confidence 3457899999998654 222211 1138899999999999999999876543 3233445556666666654
Q ss_pred C-CCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccC
Q 021765 162 E-DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 162 ~-~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~ 200 (308)
. +.+|.++|.|++|.....+|...|..++++|...+...
T Consensus 98 ws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d 137 (272)
T PF02129_consen 98 WSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSD 137 (272)
T ss_dssp TEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SB
T ss_pred CCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCc
Confidence 3 24899999999999999999988888999998877553
No 105
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.64 E-value=2.8e-07 Score=77.84 Aligned_cols=86 Identities=21% Similarity=0.334 Sum_probs=65.6
Q ss_pred EEEeCCCCCChhHHH--HHHHHHHHCC--CeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeCh
Q 021765 98 FVLIHGEGFGAWCWY--KTVASLEEVG--LIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSS 173 (308)
Q Consensus 98 vvllHG~~~~~~~~~--~~~~~L~~~G--~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~ 173 (308)
|+++||+.++..... .+.+.+.+.+ ..+.++|++ ....+..+.+.+.++....+ .+.|||+||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------~~p~~a~~~l~~~i~~~~~~-~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------PFPEEAIAQLEQLIEELKPE-NVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------cCHHHHHHHHHHHHHhCCCC-CeEEEEECh
Confidence 799999999987765 3556677654 456666654 24556677778888887765 699999999
Q ss_pred hHHHHHHHHHhCCccccEEEEEcccc
Q 021765 174 GGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 174 GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
||+.|.+++.+++ +.+ |+++|..
T Consensus 69 GG~~A~~La~~~~--~~a-vLiNPav 91 (187)
T PF05728_consen 69 GGFYATYLAERYG--LPA-VLINPAV 91 (187)
T ss_pred HHHHHHHHHHHhC--CCE-EEEcCCC
Confidence 9999999999876 444 8888875
No 106
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.63 E-value=6.5e-07 Score=72.25 Aligned_cols=109 Identities=20% Similarity=0.235 Sum_probs=81.7
Q ss_pred eEEEEeCCCCCChh--HHHHHHHHHHHCCCeEEEeCCCCCCCCC----CCCC-CcCCHHHHHHHHHHHHHHcCCCCcEEE
Q 021765 96 KKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDL----SDTN-SVTTLAEYSKPLLDYLENLLEDEKVIL 168 (308)
Q Consensus 96 ~~vvllHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~----~~~~-~~~~~~~~~~~l~~~l~~l~~~~~v~l 168 (308)
-+||+.||.+.+.+ ........|+.+|+.|..|++|-...-. .+++ ...-...+...+.++-+.+..+ ++++
T Consensus 15 ~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~g-pLi~ 93 (213)
T COG3571 15 VTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEG-PLII 93 (213)
T ss_pred EEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCC-ceee
Confidence 37899999998866 4567888999999999999998543221 1222 2233456677777777776665 9999
Q ss_pred EEeChhHHHHHHHHHhCCccccEEEEEccccCCCCCC
Q 021765 169 VGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQR 205 (308)
Q Consensus 169 vGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~~g~~ 205 (308)
-||||||-++..++...-..|+++++++-+.-++|.+
T Consensus 94 GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKP 130 (213)
T COG3571 94 GGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKP 130 (213)
T ss_pred ccccccchHHHHHHHhhcCCcceEEEecCccCCCCCc
Confidence 9999999999988876666699999998777666643
No 107
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.62 E-value=1.5e-07 Score=81.77 Aligned_cols=104 Identities=19% Similarity=0.201 Sum_probs=73.7
Q ss_pred CCCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHH----HHcCC-----
Q 021765 92 NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYL----ENLLE----- 162 (308)
Q Consensus 92 ~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l----~~l~~----- 162 (308)
.+.-|.|+|+||+.-....|..++.+++.+||-|+++++-..- . . ....--+.+..+.+++ +.+-.
T Consensus 43 ~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~-~---p-~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~ 117 (307)
T PF07224_consen 43 AGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLF-P---P-DGQDEIKSAASVINWLPEGLQHVLPENVEA 117 (307)
T ss_pred CCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhccc-C---C-CchHHHHHHHHHHHHHHhhhhhhCCCCccc
Confidence 4556899999999999888999999999999999999986431 1 1 1111112333333333 22211
Q ss_pred -CCcEEEEEeChhHHHHHHHHHhCC--ccccEEEEEccccC
Q 021765 163 -DEKVILVGHSSGGACVSYALEHFP--QKISKAIFLCATMV 200 (308)
Q Consensus 163 -~~~v~lvGhS~GG~~a~~~a~~~p--~~v~~lVli~~~~~ 200 (308)
-.++.++|||.||-.|..+|..+. -+++++|.++|..-
T Consensus 118 nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 118 NLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred ccceEEEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 148999999999999988887663 35889999988753
No 108
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.60 E-value=5.3e-07 Score=82.96 Aligned_cols=105 Identities=19% Similarity=0.189 Sum_probs=59.6
Q ss_pred CCceEEEEeCCCCCChhH--------------H----HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCC----cCCHHHHH
Q 021765 93 IQYKKFVLIHGEGFGAWC--------------W----YKTVASLEEVGLIPTALDLKGSGIDLSDTNS----VTTLAEYS 150 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~~--------------~----~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~----~~~~~~~~ 150 (308)
+..|.||++||-++..+. + ..+...|+++||.|+++|.+|+|........ ..+....+
T Consensus 113 ~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la 192 (390)
T PF12715_consen 113 GPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALA 192 (390)
T ss_dssp S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHH
T ss_pred CCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHH
Confidence 345789999998776542 1 1356789999999999999999986532211 11112121
Q ss_pred H---------------H---HHHHHHHcCC--CCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccc
Q 021765 151 K---------------P---LLDYLENLLE--DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCAT 198 (308)
Q Consensus 151 ~---------------~---l~~~l~~l~~--~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~ 198 (308)
. + +.++|..+.. .++|.++|+||||..++.+++.. ++|++.|..+..
T Consensus 193 ~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~l 259 (390)
T PF12715_consen 193 RNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGYL 259 (390)
T ss_dssp HHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-B
T ss_pred HHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhhh
Confidence 1 1 1233333321 14899999999999999998864 689888876654
No 109
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.59 E-value=2e-07 Score=85.01 Aligned_cols=108 Identities=14% Similarity=0.099 Sum_probs=81.4
Q ss_pred ceEEEEeCCCCCChhHHH-------HHHHHH-------HHCCCeEEEeCCCCCC-CCCCC----CC--------CcCCHH
Q 021765 95 YKKFVLIHGEGFGAWCWY-------KTVASL-------EEVGLIPTALDLKGSG-IDLSD----TN--------SVTTLA 147 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~~~-------~~~~~L-------~~~G~~vi~~D~~G~G-~S~~~----~~--------~~~~~~ 147 (308)
...|+++||+.++..... .+++.| ....|-||++|..|.+ .|+++ +. +..++.
T Consensus 51 ~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~ 130 (368)
T COG2021 51 DNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIR 130 (368)
T ss_pred CceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHH
Confidence 468999999998654322 133333 3334899999998865 34322 11 346888
Q ss_pred HHHHHHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCCC
Q 021765 148 EYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSD 202 (308)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~~ 202 (308)
|+++.-..+++++++.+=..+||-||||+.++.++..||++|.++|.+++.....
T Consensus 131 D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s 185 (368)
T COG2021 131 DMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLS 185 (368)
T ss_pred HHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCC
Confidence 9999888899999998334599999999999999999999999999999876543
No 110
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.57 E-value=1.6e-07 Score=88.13 Aligned_cols=110 Identities=20% Similarity=0.243 Sum_probs=61.8
Q ss_pred CCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCC-CCCC-----C-----C-------C------C---CcC-
Q 021765 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGS-GIDL-----S-----D-------T------N---SVT- 144 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~-G~S~-----~-----~-------~------~---~~~- 144 (308)
..-|+|||-||++++...+..+...|+.+||-|+++|++.. +... . . . . ...
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 34589999999999999999999999999999999999943 2110 0 0 0 0 000
Q ss_pred ------CHHHHHHHHHHHH---HHcCC----------------------CCcEEEEEeChhHHHHHHHHHhCCccccEEE
Q 021765 145 ------TLAEYSKPLLDYL---ENLLE----------------------DEKVILVGHSSGGACVSYALEHFPQKISKAI 193 (308)
Q Consensus 145 ------~~~~~~~~l~~~l---~~l~~----------------------~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lV 193 (308)
.++..+.++..++ +.++. -++|.++|||+||..+..++... .++++.|
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I 256 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGI 256 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEE
Confidence 0111222333333 22110 03699999999999999888765 6799999
Q ss_pred EEccccCCCC
Q 021765 194 FLCATMVSDG 203 (308)
Q Consensus 194 li~~~~~~~g 203 (308)
++++.+.+.+
T Consensus 257 ~LD~W~~Pl~ 266 (379)
T PF03403_consen 257 LLDPWMFPLG 266 (379)
T ss_dssp EES---TTS-
T ss_pred EeCCcccCCC
Confidence 9999986543
No 111
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.57 E-value=2.4e-07 Score=83.18 Aligned_cols=101 Identities=17% Similarity=0.143 Sum_probs=71.5
Q ss_pred ceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCC-CcEEEEEeCh
Q 021765 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLED-EKVILVGHSS 173 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~-~~v~lvGhS~ 173 (308)
...||++-|..+--+. .....=.+.||.|+.+++||++.|.+.+-...+....-..+.-.++.++.. ++|++.|||.
T Consensus 243 q~LvIC~EGNAGFYEv--G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSI 320 (517)
T KOG1553|consen 243 QDLVICFEGNAGFYEV--GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSI 320 (517)
T ss_pred ceEEEEecCCccceEe--eeecChHHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccceEEEEeec
Confidence 3577888886553221 222223345999999999999999886654444443333333445556542 5899999999
Q ss_pred hHHHHHHHHHhCCccccEEEEEccc
Q 021765 174 GGACVSYALEHFPQKISKAIFLCAT 198 (308)
Q Consensus 174 GG~~a~~~a~~~p~~v~~lVli~~~ 198 (308)
||..+.++|..||+ |+++|+-+++
T Consensus 321 GGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 321 GGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred CCchHHHHhhcCCC-ceEEEeecch
Confidence 99999999999996 9999987765
No 112
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.56 E-value=2.6e-07 Score=81.75 Aligned_cols=105 Identities=26% Similarity=0.347 Sum_probs=67.2
Q ss_pred CceEEEEeCCCCCChhHHHHHHHHHH-HCCC--eEE--EeCCCCC----CCCCC---CC-------CCc-CCHHHHHHHH
Q 021765 94 QYKKFVLIHGEGFGAWCWYKTVASLE-EVGL--IPT--ALDLKGS----GIDLS---DT-------NSV-TTLAEYSKPL 153 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~-~~G~--~vi--~~D~~G~----G~S~~---~~-------~~~-~~~~~~~~~l 153 (308)
...|.||+||++++...+..++..+. +.|. .++ .++--|. |.-.. .+ ... .+....++.+
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 34689999999999999999999997 6654 233 3333331 22111 00 011 3566667766
Q ss_pred HHHHHHc----CCCCcEEEEEeChhHHHHHHHHHhCCc-----cccEEEEEcccc
Q 021765 154 LDYLENL----LEDEKVILVGHSSGGACVSYALEHFPQ-----KISKAIFLCATM 199 (308)
Q Consensus 154 ~~~l~~l----~~~~~v~lvGhS~GG~~a~~~a~~~p~-----~v~~lVli~~~~ 199 (308)
..++..| +.. ++.+|||||||..+..++..+.. ++.++|.|+++.
T Consensus 90 ~~vl~~L~~~Y~~~-~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pf 143 (255)
T PF06028_consen 90 KKVLKYLKKKYHFK-KFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPF 143 (255)
T ss_dssp HHHHHHHHHCC--S-EEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--T
T ss_pred HHHHHHHHHhcCCC-EEeEEEECccHHHHHHHHHHhccCCCCcccceEEEecccc
Confidence 6666665 344 99999999999999998887532 589999999864
No 113
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.54 E-value=3.3e-07 Score=79.54 Aligned_cols=88 Identities=19% Similarity=0.226 Sum_probs=51.9
Q ss_pred CceEEEEeCCCCCChhHHHHHHHHHHHC--CCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHH----HHHHHcCCC-CcE
Q 021765 94 QYKKFVLIHGEGFGAWCWYKTVASLEEV--GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLL----DYLENLLED-EKV 166 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~~--G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~----~~l~~l~~~-~~v 166 (308)
+...|||+||++++..+|..+.+.+... .+.-..+...++..... .....++..++.+. +.++..... .++
T Consensus 3 ~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~--~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~I 80 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEF--KTFDGIDVCGERLAEEILEHIKDYESKIRKI 80 (217)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhccccccc--ccchhhHHHHHHHHHHHHHhccccccccccc
Confidence 3468999999999999998887777651 12211222222211111 12234454444443 333333322 489
Q ss_pred EEEEeChhHHHHHHHHH
Q 021765 167 ILVGHSSGGACVSYALE 183 (308)
Q Consensus 167 ~lvGhS~GG~~a~~~a~ 183 (308)
++|||||||.++.++..
T Consensus 81 sfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 81 SFIGHSLGGLIARYALG 97 (217)
T ss_pred eEEEecccHHHHHHHHH
Confidence 99999999999987765
No 114
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.54 E-value=2.5e-06 Score=74.98 Aligned_cols=105 Identities=18% Similarity=0.184 Sum_probs=77.5
Q ss_pred eEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCC-CCCCCCCC------C----cCCHHHHHHHHHHHHHHc---C
Q 021765 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGS-GIDLSDTN------S----VTTLAEYSKPLLDYLENL---L 161 (308)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~-G~S~~~~~------~----~~~~~~~~~~l~~~l~~l---~ 161 (308)
|.||++|++.+-......+.+.|+..||.|+++|+-+. |.+..... . .....+...++...++.+ .
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 89999999999999999999999999999999998763 33221110 0 112244455555555544 3
Q ss_pred --CCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCC
Q 021765 162 --EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (308)
Q Consensus 162 --~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~ 201 (308)
..++|.++|+||||.+++.++...| .|++.|..-+....
T Consensus 108 ~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~ 148 (236)
T COG0412 108 QVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIA 148 (236)
T ss_pred CCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCC
Confidence 1247999999999999999999876 69888888776653
No 115
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.54 E-value=8.6e-07 Score=81.29 Aligned_cols=105 Identities=20% Similarity=0.235 Sum_probs=63.9
Q ss_pred CCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCC-------------CCcCC------HHHHHHHH
Q 021765 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDT-------------NSVTT------LAEYSKPL 153 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~-------------~~~~~------~~~~~~~l 153 (308)
+.-|.||.+||+++....|...+. ++..||.|+.+|.+|+|....+. ....+ +.....+.
T Consensus 81 ~~~Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~ 159 (320)
T PF05448_consen 81 GKLPAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDA 159 (320)
T ss_dssp SSEEEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHH
T ss_pred CCcCEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHH
Confidence 345789999999999887766554 56779999999999999322100 00111 11222333
Q ss_pred H---HHHHHcCC--CCcEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 154 L---DYLENLLE--DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 154 ~---~~l~~l~~--~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
. +++..+.. .++|.+.|.|+||.+++.+|...+ +|++++...|+.
T Consensus 160 ~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l 209 (320)
T PF05448_consen 160 VRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFL 209 (320)
T ss_dssp HHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESS
T ss_pred HHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCc
Confidence 3 33333321 248999999999999999999765 699999887765
No 116
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.53 E-value=1.2e-06 Score=76.85 Aligned_cols=109 Identities=14% Similarity=0.157 Sum_probs=69.7
Q ss_pred CCceEEEEeCCCCCChhHH-HHHHHHHHHCCC--eEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcC---CCCcE
Q 021765 93 IQYKKFVLIHGEGFGAWCW-YKTVASLEEVGL--IPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL---EDEKV 166 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~-~~~~~~L~~~G~--~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~---~~~~v 166 (308)
.++..+||+||+..+-+.- ...++.....++ .++.+.||+.|.-..-.....+...-...+.++|+.+. ...+|
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 4567999999999886643 233333333333 79999999887532211122233344455556665543 22499
Q ss_pred EEEEeChhHHHHHHHHHh----CC-----ccccEEEEEccccCC
Q 021765 167 ILVGHSSGGACVSYALEH----FP-----QKISKAIFLCATMVS 201 (308)
Q Consensus 167 ~lvGhS~GG~~a~~~a~~----~p-----~~v~~lVli~~~~~~ 201 (308)
.|++||||+.+.+.+... .+ .++..+|+++|-...
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 999999999998877654 11 267889998876543
No 117
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.52 E-value=5.4e-06 Score=77.89 Aligned_cols=103 Identities=11% Similarity=0.051 Sum_probs=80.5
Q ss_pred eEEEEeCCCCCChhHH-HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChh
Q 021765 96 KKFVLIHGEGFGAWCW-YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSG 174 (308)
Q Consensus 96 ~~vvllHG~~~~~~~~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 174 (308)
|+|+++.-+.+..... ..+++.|.+ |+.|+..||.--+..... ....+++++++-+.++++.++. ++.++|+|+|
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~-~~~f~ldDYi~~l~~~i~~~G~--~v~l~GvCqg 178 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLS-AGKFDLEDYIDYLIEFIRFLGP--DIHVIAVCQP 178 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchh-cCCCCHHHHHHHHHHHHHHhCC--CCcEEEEchh
Confidence 6999999988666654 478999998 999999999765532211 2445899999999999998865 4999999999
Q ss_pred HHHHHHHHHhC-----CccccEEEEEccccCCC
Q 021765 175 GACVSYALEHF-----PQKISKAIFLCATMVSD 202 (308)
Q Consensus 175 G~~a~~~a~~~-----p~~v~~lVli~~~~~~~ 202 (308)
|..++.+++.+ |.+++.++++++++...
T Consensus 179 G~~~laa~Al~a~~~~p~~~~sltlm~~PID~~ 211 (406)
T TIGR01849 179 AVPVLAAVALMAENEPPAQPRSMTLMGGPIDAR 211 (406)
T ss_pred hHHHHHHHHHHHhcCCCCCcceEEEEecCccCC
Confidence 99866555543 66799999999987654
No 118
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.50 E-value=5e-07 Score=78.88 Aligned_cols=189 Identities=17% Similarity=0.206 Sum_probs=106.6
Q ss_pred EEeeccCCeeeEEE--ec--C-CCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCC---Cc----
Q 021765 76 LSESLSNGKQDTNI--LE--N-IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN---SV---- 143 (308)
Q Consensus 76 ~~~~~~~~~~~~~~--~~--~-~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~---~~---- 143 (308)
++.+-..|..+.-+ .+ . +.-|.||-.||++++.+.|..+... +..||.|+..|.||.|.|+.+.. ..
T Consensus 59 vTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~w-a~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~p 137 (321)
T COG3458 59 VTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHW-AVAGYAVFVMDVRGQGSSSQDTADPPGGPSDP 137 (321)
T ss_pred EEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccccc-cccceeEEEEecccCCCccccCCCCCCCCcCC
Confidence 33333455555522 22 2 3458999999999999988777643 45699999999999998743111 00
Q ss_pred -------------C----CHHHHHHHHHHHHHHcCC--CCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCCCCC
Q 021765 144 -------------T----TLAEYSKPLLDYLENLLE--DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQ 204 (308)
Q Consensus 144 -------------~----~~~~~~~~l~~~l~~l~~--~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~~g~ 204 (308)
+ -+.|.++ +.+++..+.. +++|.+.|.|.||.+++.++...| +|++++.+-|+.... .
T Consensus 138 G~mtrGilD~kd~yyyr~v~~D~~~-ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df-~ 214 (321)
T COG3458 138 GFMTRGILDRKDTYYYRGVFLDAVR-AVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDF-P 214 (321)
T ss_pred ceeEeecccCCCceEEeeehHHHHH-HHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccc-h
Confidence 0 0112222 2233333321 259999999999999999988655 799888776664322 1
Q ss_pred ChhhhhHhhhcchHHHHHHHHHHHhcCCCCCCCcccccCHHHHHHHhcCCCchhhhhcccCCCCCccchhhhcccccccc
Q 021765 205 RPFDVFAEELGSAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKGLYFNQSPSKVWYSSSLSFPIKQFLWFYQFAESLTS 284 (308)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~p~~~~l~i~G~~D~~vp 284 (308)
..++... ...-+ .+.. ++... .| ...+.++.+-|-|.. ...+.++.| +|+.-|..|+++|
T Consensus 215 r~i~~~~--~~~yd-ei~~---y~k~h---~~-----~e~~v~~TL~yfD~~---n~A~RiK~p---vL~svgL~D~vcp 274 (321)
T COG3458 215 RAIELAT--EGPYD-EIQT---YFKRH---DP-----KEAEVFETLSYFDIV---NLAARIKVP---VLMSVGLMDPVCP 274 (321)
T ss_pred hheeecc--cCcHH-HHHH---HHHhc---Cc-----hHHHHHHHHhhhhhh---hHHHhhccc---eEEeecccCCCCC
Confidence 1111100 01111 1111 11111 01 122333333333331 233456778 9999999999988
Q ss_pred hhhc
Q 021765 285 AYVS 288 (308)
Q Consensus 285 ~~~~ 288 (308)
.-..
T Consensus 275 Pstq 278 (321)
T COG3458 275 PSTQ 278 (321)
T ss_pred Chhh
Confidence 5443
No 119
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.48 E-value=2.6e-06 Score=75.77 Aligned_cols=115 Identities=13% Similarity=0.187 Sum_probs=77.3
Q ss_pred CceEEEEeCCCCCChhH-HHHHH-----HHHHHCCCeEEEeCCCCCCCCCCC--CC-CcCCHHHHHHHHHHHHHHcCCCC
Q 021765 94 QYKKFVLIHGEGFGAWC-WYKTV-----ASLEEVGLIPTALDLKGSGIDLSD--TN-SVTTLAEYSKPLLDYLENLLEDE 164 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~-~~~~~-----~~L~~~G~~vi~~D~~G~G~S~~~--~~-~~~~~~~~~~~l~~~l~~l~~~~ 164 (308)
++|+||-.|-.|.+... |..+. +.+.+ .|.++-+|.||+..-... .. ...++++.++++.+++++++.+
T Consensus 22 ~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~-~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk- 99 (283)
T PF03096_consen 22 NKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ-NFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLK- 99 (283)
T ss_dssp TS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT-TSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT---
T ss_pred CCceEEEeccccccchHHHHHHhcchhHHHHhh-ceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCcc-
Confidence 48999999999988775 66553 34555 599999999998764322 21 3468999999999999999997
Q ss_pred cEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCCCCCChhhhhHh
Q 021765 165 KVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAE 212 (308)
Q Consensus 165 ~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~~g~~~~~~~~~ 212 (308)
.++-+|--.|+.|...+|..+|++|.++|++++.....| +.+++..
T Consensus 100 ~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~g--w~Ew~~~ 145 (283)
T PF03096_consen 100 SVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAG--WMEWFYQ 145 (283)
T ss_dssp -EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S-----HHHHHHH
T ss_pred EEEEEeeccchhhhhhccccCccceeEEEEEecCCCCcc--HHHHHHH
Confidence 899999999999999999999999999999999876653 3444433
No 120
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.44 E-value=6.4e-07 Score=82.78 Aligned_cols=100 Identities=23% Similarity=0.256 Sum_probs=78.3
Q ss_pred eEEEEeCCCCCChhHHHHHHHHHHHCCCe---EEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeC
Q 021765 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLI---PTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (308)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (308)
-++|++||++.+...|..+...+...|+. ++++++++... ........++....+.+.+...+.. ++.++|||
T Consensus 60 ~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~ql~~~V~~~l~~~ga~-~v~LigHS 135 (336)
T COG1075 60 EPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDG---TYSLAVRGEQLFAYVDEVLAKTGAK-KVNLIGHS 135 (336)
T ss_pred ceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccCC---CccccccHHHHHHHHHHHHhhcCCC-ceEEEeec
Confidence 48999999988888888887777777777 88888886521 1122234556666677777777765 99999999
Q ss_pred hhHHHHHHHHHhCC--ccccEEEEEcccc
Q 021765 173 SGGACVSYALEHFP--QKISKAIFLCATM 199 (308)
Q Consensus 173 ~GG~~a~~~a~~~p--~~v~~lVli~~~~ 199 (308)
|||.++.+++..++ .+|+.++.++++-
T Consensus 136 ~GG~~~ry~~~~~~~~~~V~~~~tl~tp~ 164 (336)
T COG1075 136 MGGLDSRYYLGVLGGANRVASVVTLGTPH 164 (336)
T ss_pred ccchhhHHHHhhcCccceEEEEEEeccCC
Confidence 99999999999888 7899999998764
No 121
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.44 E-value=3.3e-06 Score=71.41 Aligned_cols=99 Identities=18% Similarity=0.130 Sum_probs=73.0
Q ss_pred EeCCCC--CChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhHHH
Q 021765 100 LIHGEG--FGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGAC 177 (308)
Q Consensus 100 llHG~~--~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG~~ 177 (308)
++|+.+ ++...|..+...|.. .+.|+++|.+|++.+... ..++++.+..+...+.......+++++|||+||.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~ 77 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRG-RRDVSALPLPGFGPGEPL---PASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLL 77 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCC-CccEEEecCCCCCCCCCC---CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHH
Confidence 455544 677789999999976 599999999999865432 23677777666555544433348999999999999
Q ss_pred HHHHHHh---CCccccEEEEEccccCCC
Q 021765 178 VSYALEH---FPQKISKAIFLCATMVSD 202 (308)
Q Consensus 178 a~~~a~~---~p~~v~~lVli~~~~~~~ 202 (308)
+..++.. .+..+.+++++++..+..
T Consensus 78 a~~~a~~l~~~~~~~~~l~~~~~~~~~~ 105 (212)
T smart00824 78 AHAVAARLEARGIPPAAVVLLDTYPPGD 105 (212)
T ss_pred HHHHHHHHHhCCCCCcEEEEEccCCCCC
Confidence 9888775 345789999998866543
No 122
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.42 E-value=8e-06 Score=72.18 Aligned_cols=115 Identities=12% Similarity=0.154 Sum_probs=91.5
Q ss_pred CceEEEEeCCCCCChhH-HHHH-----HHHHHHCCCeEEEeCCCCCCCCCC--CCC-CcCCHHHHHHHHHHHHHHcCCCC
Q 021765 94 QYKKFVLIHGEGFGAWC-WYKT-----VASLEEVGLIPTALDLKGSGIDLS--DTN-SVTTLAEYSKPLLDYLENLLEDE 164 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~-~~~~-----~~~L~~~G~~vi~~D~~G~G~S~~--~~~-~~~~~~~~~~~l~~~l~~l~~~~ 164 (308)
++|+||-.|..+.+... |..+ +..+.++ |-|+-+|-||+-.-.. +.. ...++++.+++|..++++++..
T Consensus 45 ~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk- 122 (326)
T KOG2931|consen 45 NKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLK- 122 (326)
T ss_pred CCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcc-
Confidence 47889999999988774 6544 3456665 9999999999854322 222 3569999999999999999997
Q ss_pred cEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCCCCCChhhhhHh
Q 021765 165 KVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAE 212 (308)
Q Consensus 165 ~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~~g~~~~~~~~~ 212 (308)
.++-+|--.|++|...+|..||++|-++|+|.+..-..| +.+|+..
T Consensus 123 ~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~g--wiew~~~ 168 (326)
T KOG2931|consen 123 SVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKG--WIEWAYN 168 (326)
T ss_pred eEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCch--HHHHHHH
Confidence 899999999999999999999999999999998765554 3444433
No 123
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.38 E-value=1.1e-06 Score=75.34 Aligned_cols=97 Identities=22% Similarity=0.271 Sum_probs=57.6
Q ss_pred EEEeCCCCCC---hhHHHHHHHHHH-HCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHH-----cCCCCcEEE
Q 021765 98 FVLIHGEGFG---AWCWYKTVASLE-EVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN-----LLEDEKVIL 168 (308)
Q Consensus 98 vvllHG~~~~---~~~~~~~~~~L~-~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~-----l~~~~~v~l 168 (308)
||++||.+.. ......+...+. +.|+.|+.+|+|=.... .....++|..+.+..++++ .+. ++|+|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~----~~p~~~~D~~~a~~~l~~~~~~~~~d~-~~i~l 75 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEA----PFPAALEDVKAAYRWLLKNADKLGIDP-ERIVL 75 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTS----STTHHHHHHHHHHHHHHHTHHHHTEEE-EEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccc----cccccccccccceeeeccccccccccc-cceEE
Confidence 7899997643 223344555555 47999999999843211 1111233333333333333 223 49999
Q ss_pred EEeChhHHHHHHHHHhCCc----cccEEEEEcccc
Q 021765 169 VGHSSGGACVSYALEHFPQ----KISKAIFLCATM 199 (308)
Q Consensus 169 vGhS~GG~~a~~~a~~~p~----~v~~lVli~~~~ 199 (308)
+|+|.||.+++.++....+ .++++++++|..
T Consensus 76 ~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 76 IGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp EEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred eecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 9999999999888865333 489999999964
No 124
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.35 E-value=1e-05 Score=73.97 Aligned_cols=105 Identities=11% Similarity=0.078 Sum_probs=67.5
Q ss_pred CceEEEEeCCCCC---ChhHH-HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHH---cCC-CCc
Q 021765 94 QYKKFVLIHGEGF---GAWCW-YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN---LLE-DEK 165 (308)
Q Consensus 94 ~~~~vvllHG~~~---~~~~~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~---l~~-~~~ 165 (308)
..|+||++||.+. +.... ..+...+...|+.|+.+|||-.-... ....++|..+.+..+.++ ++. .++
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~----~p~~~~d~~~a~~~l~~~~~~~g~dp~~ 153 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHP----FPAALEDAYAAYRWLRANAAELGIDPSR 153 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCC----CCchHHHHHHHHHHHHhhhHhhCCCccc
Confidence 3689999999763 33333 45556667789999999998543321 122344433333333322 232 258
Q ss_pred EEEEEeChhHHHHHHHHHhCCc----cccEEEEEccccCCC
Q 021765 166 VILVGHSSGGACVSYALEHFPQ----KISKAIFLCATMVSD 202 (308)
Q Consensus 166 v~lvGhS~GG~~a~~~a~~~p~----~v~~lVli~~~~~~~ 202 (308)
|+|.|+|.||.+++.++....+ .....+++.+.....
T Consensus 154 i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 154 IAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLT 194 (312)
T ss_pred eEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCc
Confidence 9999999999999888765432 467888888875443
No 125
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.34 E-value=4.4e-06 Score=68.62 Aligned_cols=93 Identities=20% Similarity=0.241 Sum_probs=68.6
Q ss_pred eEEEEeCCCCCChh-HHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChh
Q 021765 96 KKFVLIHGEGFGAW-CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSG 174 (308)
Q Consensus 96 ~~vvllHG~~~~~~-~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 174 (308)
+.+|++||+.++.. .|....+.-. -.+-.++.+ ......+++|++.+.+.+.... ++++||+||+|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l---~~a~rveq~--------~w~~P~~~dWi~~l~~~v~a~~--~~~vlVAHSLG 69 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESAL---PNARRVEQD--------DWEAPVLDDWIARLEKEVNAAE--GPVVLVAHSLG 69 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhC---ccchhcccC--------CCCCCCHHHHHHHHHHHHhccC--CCeEEEEeccc
Confidence 57899999987754 6775544211 113333332 1244589999999999888773 37999999999
Q ss_pred HHHHHHHHHhCCccccEEEEEccccCC
Q 021765 175 GACVSYALEHFPQKISKAIFLCATMVS 201 (308)
Q Consensus 175 G~~a~~~a~~~p~~v~~lVli~~~~~~ 201 (308)
+..+..++.....+|.++++++++-..
T Consensus 70 c~~v~h~~~~~~~~V~GalLVAppd~~ 96 (181)
T COG3545 70 CATVAHWAEHIQRQVAGALLVAPPDVS 96 (181)
T ss_pred HHHHHHHHHhhhhccceEEEecCCCcc
Confidence 999999998877799999999988543
No 126
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.32 E-value=2.1e-06 Score=73.40 Aligned_cols=117 Identities=18% Similarity=0.286 Sum_probs=74.6
Q ss_pred EeeccCCeeeE--EEecCCCce-EEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCC--CcCCHHHHHH
Q 021765 77 SESLSNGKQDT--NILENIQYK-KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN--SVTTLAEYSK 151 (308)
Q Consensus 77 ~~~~~~~~~~~--~~~~~~~~~-~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~ 151 (308)
..+..+|..+. .+..++..+ .|+.-.+.+.....|..++..+.+.||.|+++|+||.|.|..... ....+.|++.
T Consensus 9 ~l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~ 88 (281)
T COG4757 9 HLPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWAR 88 (281)
T ss_pred ccccCCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhh
Confidence 34455554433 344444444 455555556666677789999999999999999999999874332 3345666643
Q ss_pred -HHHHHHHHcC---CCCcEEEEEeChhHHHHHHHHHhCCccccEEEEE
Q 021765 152 -PLLDYLENLL---EDEKVILVGHSSGGACVSYALEHFPQKISKAIFL 195 (308)
Q Consensus 152 -~l~~~l~~l~---~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli 195 (308)
|+...++.+. .+.+..+||||+||.+.-.+.+. + ++.+....
T Consensus 89 ~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~~-~-k~~a~~vf 134 (281)
T COG4757 89 LDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQH-P-KYAAFAVF 134 (281)
T ss_pred cchHHHHHHHHhhCCCCceEEeeccccceeecccccC-c-ccceeeEe
Confidence 4444444432 23489999999999977666553 3 44444333
No 127
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.29 E-value=2.8e-06 Score=73.37 Aligned_cols=105 Identities=21% Similarity=0.193 Sum_probs=55.0
Q ss_pred CceEEEEeCCCCCChhHHHH----HHHHHHHCCCeEEEeCCCC-----CCCCC------------------CCC----CC
Q 021765 94 QYKKFVLIHGEGFGAWCWYK----TVASLEEVGLIPTALDLKG-----SGIDL------------------SDT----NS 142 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~----~~~~L~~~G~~vi~~D~~G-----~G~S~------------------~~~----~~ 142 (308)
.++.|+++||++.++..+.. +.+.|.+.++.++.+|-|- -|... ... ..
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 45789999999999998874 4445555368888887652 11110 000 01
Q ss_pred cCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhC--------CccccEEEEEccccC
Q 021765 143 VTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHF--------PQKISKAIFLCATMV 200 (308)
Q Consensus 143 ~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~--------p~~v~~lVli~~~~~ 200 (308)
...+++..+.+.++++..+. -..|+|+|.||.+|..++... ...++-+|+++++.+
T Consensus 83 ~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p 146 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPP 146 (212)
T ss_dssp G---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----
T ss_pred ccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCC
Confidence 33566777777777777653 357999999999988776432 124788899988764
No 128
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.23 E-value=3.8e-06 Score=76.88 Aligned_cols=91 Identities=25% Similarity=0.180 Sum_probs=62.3
Q ss_pred CceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCC--CCCCCCCC---cC--CHHH---HHHHHHHHHHHc---
Q 021765 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSG--IDLSDTNS---VT--TLAE---YSKPLLDYLENL--- 160 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G--~S~~~~~~---~~--~~~~---~~~~l~~~l~~l--- 160 (308)
..|.|||-||.+.....|..+++.+++.||-|.++++||.. ........ .. .+.+ +...+.+.+.++
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~s 149 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTAS 149 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcC
Confidence 45899999999999999999999999999999999999943 22211111 00 1112 222233333333
Q ss_pred C-C-----CCcEEEEEeChhHHHHHHHHHh
Q 021765 161 L-E-----DEKVILVGHSSGGACVSYALEH 184 (308)
Q Consensus 161 ~-~-----~~~v~lvGhS~GG~~a~~~a~~ 184 (308)
. . ..+|.++|||+||+.++..+..
T Consensus 150 P~l~~~ld~~~Vgv~GhS~GG~T~m~laGA 179 (365)
T COG4188 150 PALAGRLDPQRVGVLGHSFGGYTAMELAGA 179 (365)
T ss_pred cccccccCccceEEEecccccHHHHHhccc
Confidence 1 1 1489999999999999888754
No 129
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.23 E-value=3e-06 Score=71.22 Aligned_cols=108 Identities=19% Similarity=0.167 Sum_probs=69.2
Q ss_pred eeEEEecCCCceEEEEeCCCC---CChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHH----HH
Q 021765 85 QDTNILENIQYKKFVLIHGEG---FGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLD----YL 157 (308)
Q Consensus 85 ~~~~~~~~~~~~~vvllHG~~---~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~----~l 157 (308)
.+.+|......+.+||+||.- ++...-...+.-+.++||+|..+++ +.+.. ..++++.+.++.. ++
T Consensus 57 ~VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~l~~q----~htL~qt~~~~~~gv~fil 129 (270)
T KOG4627|consen 57 LVDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---NLCPQ----VHTLEQTMTQFTHGVNFIL 129 (270)
T ss_pred EEEEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---CcCcc----cccHHHHHHHHHHHHHHHH
Confidence 344555567789999999953 2222223455556677999999875 33322 2245554444443 33
Q ss_pred HHcCCCCcEEEEEeChhHHHHHHHHH-hCCccccEEEEEcccc
Q 021765 158 ENLLEDEKVILVGHSSGGACVSYALE-HFPQKISKAIFLCATM 199 (308)
Q Consensus 158 ~~l~~~~~v~lvGhS~GG~~a~~~a~-~~p~~v~~lVli~~~~ 199 (308)
+.....+.+.+-|||.|+.+++.+.. .+..+|.+++++++..
T Consensus 130 k~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY 172 (270)
T KOG4627|consen 130 KYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVY 172 (270)
T ss_pred HhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHh
Confidence 44333346888899999999987754 4556899999988764
No 130
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.19 E-value=7.4e-06 Score=76.85 Aligned_cols=127 Identities=19% Similarity=0.129 Sum_probs=87.1
Q ss_pred ceEEEeeccCCeeeEEE--e-cCCCceEEEEeCCCCCChhHHH------HHHHHHHHCCCeEEEeCCCCCCCCCCCCC--
Q 021765 73 RRTLSESLSNGKQDTNI--L-ENIQYKKFVLIHGEGFGAWCWY------KTVASLEEVGLIPTALDLKGSGIDLSDTN-- 141 (308)
Q Consensus 73 ~~~~~~~~~~~~~~~~~--~-~~~~~~~vvllHG~~~~~~~~~------~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-- 141 (308)
.++..+...+|..+... . ..+.+|+|+|.||+..++..|. .++=.|+++||.|..-+.||.-.|.....
T Consensus 48 ~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~ 127 (403)
T KOG2624|consen 48 VEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLS 127 (403)
T ss_pred eEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccC
Confidence 34455556666543322 2 2266789999999999999884 34556889999999999999766643111
Q ss_pred ----C---cCCHHHHH-----HHHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhCCc---cccEEEEEccccC
Q 021765 142 ----S---VTTLAEYS-----KPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQ---KISKAIFLCATMV 200 (308)
Q Consensus 142 ----~---~~~~~~~~-----~~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p~---~v~~lVli~~~~~ 200 (308)
. ..++.+.+ +.|..+++..+.. ++..||||.|+.....++...|+ +|+.+++++|...
T Consensus 128 ~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~-kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~ 200 (403)
T KOG2624|consen 128 PSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQE-KLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAF 200 (403)
T ss_pred CcCCcceeecchhhhhhcCHHHHHHHHHHhcccc-ceEEEEEEccchhheehhcccchhhhhhheeeeecchhh
Confidence 0 12344432 2333344444554 99999999999988877776654 7999999999873
No 131
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.16 E-value=6.2e-06 Score=73.42 Aligned_cols=110 Identities=22% Similarity=0.263 Sum_probs=75.7
Q ss_pred CceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCC----CC--CC----------------------cCC
Q 021765 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLS----DT--NS----------------------VTT 145 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~----~~--~~----------------------~~~ 145 (308)
.-|.|||-||++++...|..+--.|+.+||-|.++++|.+..... +. .+ ...
T Consensus 117 k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeq 196 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQ 196 (399)
T ss_pred CccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHH
Confidence 348999999999999999999999999999999999987544320 00 00 001
Q ss_pred HHHHHHHHH---HHHHHcCCC-----------------------CcEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 146 LAEYSKPLL---DYLENLLED-----------------------EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 146 ~~~~~~~l~---~~l~~l~~~-----------------------~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
+...++++. .++++++.. .++.++|||+||..+......+ ..+++.|++++.+
T Consensus 197 v~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-t~FrcaI~lD~WM 275 (399)
T KOG3847|consen 197 VGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-TDFRCAIALDAWM 275 (399)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc-cceeeeeeeeeee
Confidence 112222222 233332110 3689999999999888776654 4699999999998
Q ss_pred CCCCC
Q 021765 200 VSDGQ 204 (308)
Q Consensus 200 ~~~g~ 204 (308)
.+-++
T Consensus 276 ~Pl~~ 280 (399)
T KOG3847|consen 276 FPLDQ 280 (399)
T ss_pred cccch
Confidence 76544
No 132
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.13 E-value=2e-05 Score=71.83 Aligned_cols=107 Identities=21% Similarity=0.251 Sum_probs=68.4
Q ss_pred CCceEEEEeCCCCCChh-HHHHHHHHHHHCCC--eEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHc---CCCCcE
Q 021765 93 IQYKKFVLIHGEGFGAW-CWYKTVASLEEVGL--IPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL---LEDEKV 166 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~-~~~~~~~~L~~~G~--~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~v 166 (308)
..+..+||+||+..+-+ .-+..++...+.|+ ..+.|.||..|.-.+-.....+...-..++..+|+.+ ....+|
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 45679999999987654 34456666666654 5788899987753321112223333333444444443 222489
Q ss_pred EEEEeChhHHHHHHHHHh--------CCccccEEEEEcccc
Q 021765 167 ILVGHSSGGACVSYALEH--------FPQKISKAIFLCATM 199 (308)
Q Consensus 167 ~lvGhS~GG~~a~~~a~~--------~p~~v~~lVli~~~~ 199 (308)
+|++||||.++++.+..+ .+.+++.+|+-+|-.
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 999999999999888764 244678888877654
No 133
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.11 E-value=1.9e-05 Score=71.55 Aligned_cols=94 Identities=19% Similarity=0.176 Sum_probs=63.5
Q ss_pred CCCceEEEEeCCCCCChhHH-------HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHc--CC
Q 021765 92 NIQYKKFVLIHGEGFGAWCW-------YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL--LE 162 (308)
Q Consensus 92 ~~~~~~vvllHG~~~~~~~~-------~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l--~~ 162 (308)
..+.+.||++-|.++.-+.. ..+.+.....|-+|+.+++||.|.|.+... ..++....+.+.++++.. +.
T Consensus 134 a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s-~~dLv~~~~a~v~yL~d~~~G~ 212 (365)
T PF05677_consen 134 AKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPS-RKDLVKDYQACVRYLRDEEQGP 212 (365)
T ss_pred CCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCC-HHHHHHHHHHHHHHHHhcccCC
Confidence 34567999999987765541 123344445678999999999999987653 233434444444555431 21
Q ss_pred -CCcEEEEEeChhHHHHHHHHHhCC
Q 021765 163 -DEKVILVGHSSGGACVSYALEHFP 186 (308)
Q Consensus 163 -~~~v~lvGhS~GG~~a~~~a~~~p 186 (308)
.+++++.|||+||.++..++.++.
T Consensus 213 ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 213 KAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred ChheEEEeeccccHHHHHHHHHhcc
Confidence 158999999999999998877653
No 134
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.07 E-value=1.1e-05 Score=74.79 Aligned_cols=102 Identities=18% Similarity=0.188 Sum_probs=77.6
Q ss_pred ceEEEEeCCCCCChhHH-----HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHH-HHHHH----HHHHcCCCC
Q 021765 95 YKKFVLIHGEGFGAWCW-----YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYS-KPLLD----YLENLLEDE 164 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~~-----~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~-~~l~~----~l~~l~~~~ 164 (308)
+++++++|-+-.....| ..++..|.+.|+.|+.+++++-..+.. ..++++++ +.+.+ +.+..+..
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~----~~~~edYi~e~l~~aid~v~~itg~~- 181 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA----AKNLEDYILEGLSEAIDTVKDITGQK- 181 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh----hccHHHHHHHHHHHHHHHHHHHhCcc-
Confidence 57999999987766655 368889999999999999987655443 34677776 43433 33344555
Q ss_pred cEEEEEeChhHHHHHHHHHhCCcc-ccEEEEEccccCC
Q 021765 165 KVILVGHSSGGACVSYALEHFPQK-ISKAIFLCATMVS 201 (308)
Q Consensus 165 ~v~lvGhS~GG~~a~~~a~~~p~~-v~~lVli~~~~~~ 201 (308)
+|.++|||.||.++..++..++.+ |+.++++.+....
T Consensus 182 ~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF 219 (445)
T COG3243 182 DINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDF 219 (445)
T ss_pred ccceeeEecchHHHHHHHHhhhhcccccceeeecchhh
Confidence 999999999999998888888877 9999998877643
No 135
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.02 E-value=7.7e-05 Score=64.54 Aligned_cols=196 Identities=15% Similarity=0.100 Sum_probs=96.4
Q ss_pred EeeccCCeeeEEEecC------CCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCC-CCCCCCCCCcCCHHHH
Q 021765 77 SESLSNGKQDTNILEN------IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGS-GIDLSDTNSVTTLAEY 149 (308)
Q Consensus 77 ~~~~~~~~~~~~~~~~------~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~-G~S~~~~~~~~~~~~~ 149 (308)
..-..++..+.+|... ...++||+.+|++-....|..++.+|...||+|+.+|.--| |.|++.. ...++..-
T Consensus 6 vi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I-~eftms~g 84 (294)
T PF02273_consen 6 VIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDI-NEFTMSIG 84 (294)
T ss_dssp EEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B--------------HHHH
T ss_pred eeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCCh-hhcchHHh
Confidence 3445677777766522 22479999999999999999999999999999999998765 7777654 33466555
Q ss_pred HHHHH---HHHHHcCCCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCCCCCChhhhhHhhhcchHHHHHHHHH
Q 021765 150 SKPLL---DYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQF 226 (308)
Q Consensus 150 ~~~l~---~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 226 (308)
.+++. ++++..+.. ++.|+.-|+.|-+|...+..- .+.-+|..-+.+ + +-+.+.+-++.. ++.....
T Consensus 85 ~~sL~~V~dwl~~~g~~-~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVV--n---lr~TLe~al~~D--yl~~~i~ 154 (294)
T PF02273_consen 85 KASLLTVIDWLATRGIR-RIGLIAASLSARIAYEVAADI--NLSFLITAVGVV--N---LRDTLEKALGYD--YLQLPIE 154 (294)
T ss_dssp HHHHHHHHHHHHHTT----EEEEEETTHHHHHHHHTTTS----SEEEEES--S------HHHHHHHHHSS---GGGS-GG
T ss_pred HHHHHHHHHHHHhcCCC-cchhhhhhhhHHHHHHHhhcc--CcceEEEEeeee--e---HHHHHHHHhccc--hhhcchh
Confidence 55554 555555665 899999999999999998853 477676655432 1 111111111110 1110000
Q ss_pred HHhcCCCCCCCccccc-CHHHHHHHhcCCC---chhhhhcccCCCCCccchhhhcccccccchhhch
Q 021765 227 LIYGNGKDKPPTGFMF-EKQQMKGLYFNQS---PSKVWYSSSLSFPIKQFLWFYQFAESLTSAYVSW 289 (308)
Q Consensus 227 ~l~~~~~~~~~~~~~~-~~~~l~~~~~~~~---~~~~~~l~~~~~p~~~~l~i~G~~D~~vp~~~~~ 289 (308)
.+... .+ -.+..+ ...++..-|-+.. .+.......+.+| ++.+++..|..|-+-+..
T Consensus 155 ~lp~d-ld--feGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP---~iaF~A~~D~WV~q~eV~ 215 (294)
T PF02273_consen 155 QLPED-LD--FEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIP---FIAFTANDDDWVKQSEVE 215 (294)
T ss_dssp G--SE-EE--ETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S----EEEEEETT-TTS-HHHHH
T ss_pred hCCCc-cc--ccccccchHHHHHHHHHcCCccchhHHHHHhhCCCC---EEEEEeCCCccccHHHHH
Confidence 00000 00 001111 1335555554443 3334466677778 899999999988766554
No 136
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.02 E-value=4.5e-05 Score=66.19 Aligned_cols=104 Identities=25% Similarity=0.266 Sum_probs=69.5
Q ss_pred eEEEEeCCCCCChhHHHHHHHHHHHCC-----CeEEEeCCCCC----CCCCCCC----------CCcCCHHHHHHHHHHH
Q 021765 96 KKFVLIHGEGFGAWCWYKTVASLEEVG-----LIPTALDLKGS----GIDLSDT----------NSVTTLAEYSKPLLDY 156 (308)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G-----~~vi~~D~~G~----G~S~~~~----------~~~~~~~~~~~~l~~~ 156 (308)
-|.||+||.+++......++..|.+.+ -=++.+|--|. |.-+.+. ....+..++...+..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 378999999999999999999998763 12455565551 1111100 1122444445544444
Q ss_pred HHHc----CCCCcEEEEEeChhHHHHHHHHHhCCc-----cccEEEEEccccC
Q 021765 157 LENL----LEDEKVILVGHSSGGACVSYALEHFPQ-----KISKAIFLCATMV 200 (308)
Q Consensus 157 l~~l----~~~~~v~lvGhS~GG~~a~~~a~~~p~-----~v~~lVli~~~~~ 200 (308)
+..| +.+ .+.+|||||||....+++..+.. .+.++|.++++.-
T Consensus 126 msyL~~~Y~i~-k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 126 MSYLQKHYNIP-KFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHhcCCc-eeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 4443 455 89999999999988888876533 4899999988754
No 137
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.01 E-value=2.6e-05 Score=65.32 Aligned_cols=98 Identities=15% Similarity=0.206 Sum_probs=72.4
Q ss_pred eEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHc----CCCCcEEEEEe
Q 021765 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL----LEDEKVILVGH 171 (308)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~v~lvGh 171 (308)
..+||+-|=++....=..+++.|+++|+.|+.+|-.-+=.+. .+-++.+.++..+++.. +.. +++|+|.
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~------rtP~~~a~Dl~~~i~~y~~~w~~~-~vvLiGY 75 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSE------RTPEQTAADLARIIRHYRARWGRK-RVVLIGY 75 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhh------CCHHHHHHHHHHHHHHHHHHhCCc-eEEEEee
Confidence 357888887777655567899999999999999966443332 24445555555555443 444 9999999
Q ss_pred ChhHHHHHHHHHhCCc----cccEEEEEccccC
Q 021765 172 SSGGACVSYALEHFPQ----KISKAIFLCATMV 200 (308)
Q Consensus 172 S~GG~~a~~~a~~~p~----~v~~lVli~~~~~ 200 (308)
|+|+-+......+.|. +|..++++++...
T Consensus 76 SFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 76 SFGADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred cCCchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 9999988888877764 7899999988753
No 138
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.99 E-value=0.0003 Score=64.36 Aligned_cols=108 Identities=12% Similarity=0.167 Sum_probs=70.3
Q ss_pred eEEEEeCCCCCChh---HHHHHHHHHHHCCCeEEEeCCCCC--CCCC------------C--CCCCc------------C
Q 021765 96 KKFVLIHGEGFGAW---CWYKTVASLEEVGLIPTALDLKGS--GIDL------------S--DTNSV------------T 144 (308)
Q Consensus 96 ~~vvllHG~~~~~~---~~~~~~~~L~~~G~~vi~~D~~G~--G~S~------------~--~~~~~------------~ 144 (308)
-.||++||.+.+.+ .-..+-..|.++||.++++.+|.- .... . ..... .
T Consensus 88 G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 167 (310)
T PF12048_consen 88 GAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAE 167 (310)
T ss_pred eEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHhH
Confidence 38999999998764 345677789999999999988871 1000 0 00000 0
Q ss_pred CHHHHHHHH-------HHHHHHcCCCCcEEEEEeChhHHHHHHHHHhCCc-cccEEEEEccccCCCCC
Q 021765 145 TLAEYSKPL-------LDYLENLLEDEKVILVGHSSGGACVSYALEHFPQ-KISKAIFLCATMVSDGQ 204 (308)
Q Consensus 145 ~~~~~~~~l-------~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p~-~v~~lVli~~~~~~~g~ 204 (308)
....+...+ .++++..+.. +++||||..|+..+..+....+. .++++|+|++..+....
T Consensus 168 ~~~~~~~~~~ari~Aa~~~~~~~~~~-~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~~~ 234 (310)
T PF12048_consen 168 AREAYEERLFARIEAAIAFAQQQGGK-NIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQPDR 234 (310)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhcCCc-eEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcchh
Confidence 112222222 2333333332 59999999999988888776654 58999999999876643
No 139
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.98 E-value=1.8e-05 Score=69.62 Aligned_cols=51 Identities=24% Similarity=0.427 Sum_probs=40.6
Q ss_pred HHHHHHHHHHcC-CC-CcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccC
Q 021765 150 SKPLLDYLENLL-ED-EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 150 ~~~l~~~l~~l~-~~-~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~ 200 (308)
.++|..+++..- .. .+..|.|+||||..|+.++.++|+.+.+++.+++..-
T Consensus 99 ~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 99 TEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALD 151 (251)
T ss_dssp HTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESE
T ss_pred hccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccc
Confidence 456666666542 22 1389999999999999999999999999999997743
No 140
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=97.97 E-value=4.9e-05 Score=77.50 Aligned_cols=87 Identities=15% Similarity=0.033 Sum_probs=64.6
Q ss_pred HHHHHHHHCCCeEEEeCCCCCCCCCCCCCCc-CCHHHHHHHHHHHHHHcC----------------CCCcEEEEEeChhH
Q 021765 113 KTVASLEEVGLIPTALDLKGSGIDLSDTNSV-TTLAEYSKPLLDYLENLL----------------EDEKVILVGHSSGG 175 (308)
Q Consensus 113 ~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~-~~~~~~~~~l~~~l~~l~----------------~~~~v~lvGhS~GG 175 (308)
.+.+++..+||.|+.+|.||+|.|.+..... ..-.+...++++++.... .+++|.++|.|+||
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 4567899999999999999999998754321 222334445555555210 12599999999999
Q ss_pred HHHHHHHHhCCccccEEEEEcccc
Q 021765 176 ACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 176 ~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
.++..+|...|..++++|.+++..
T Consensus 350 ~~~~~aAa~~pp~LkAIVp~a~is 373 (767)
T PRK05371 350 TLPNAVATTGVEGLETIIPEAAIS 373 (767)
T ss_pred HHHHHHHhhCCCcceEEEeeCCCC
Confidence 999999888888899999887653
No 141
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=97.96 E-value=3.3e-05 Score=74.79 Aligned_cols=129 Identities=12% Similarity=-0.015 Sum_probs=92.3
Q ss_pred cceEEEeeccCCeeeE--EEecC--CCceEEEEeC--CCCCCh---hHHHHHHH---HHHHCCCeEEEeCCCCCCCCCCC
Q 021765 72 RRRTLSESLSNGKQDT--NILEN--IQYKKFVLIH--GEGFGA---WCWYKTVA---SLEEVGLIPTALDLKGSGIDLSD 139 (308)
Q Consensus 72 ~~~~~~~~~~~~~~~~--~~~~~--~~~~~vvllH--G~~~~~---~~~~~~~~---~L~~~G~~vi~~D~~G~G~S~~~ 139 (308)
..+...+++-+|..+. +|..+ +..|+++..+ -+.-.. ..-....+ .++.+||.|+..|.||.|.|++.
T Consensus 18 ~~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~ 97 (563)
T COG2936 18 IERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGV 97 (563)
T ss_pred eeeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcc
Confidence 3456778899998876 55554 4456777777 222221 11122333 57788999999999999999987
Q ss_pred CCCcCC-HHHHHHHHHHHHHHcCC-CCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccC
Q 021765 140 TNSVTT-LAEYSKPLLDYLENLLE-DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 140 ~~~~~~-~~~~~~~l~~~l~~l~~-~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~ 200 (308)
.....+ -.++..|+++++..+.. +.+|..+|-|++|....++|...|..+++++-..+...
T Consensus 98 ~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 98 FDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred cceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 655445 44556677777777654 35999999999999999999888878888887766654
No 142
>PLN02606 palmitoyl-protein thioesterase
Probab=97.94 E-value=5.3e-05 Score=68.00 Aligned_cols=101 Identities=19% Similarity=0.200 Sum_probs=69.1
Q ss_pred ceEEEEeCCCC--CChhHHHHHHHHHHHC-CCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCC-CCcEEEEE
Q 021765 95 YKKFVLIHGEG--FGAWCWYKTVASLEEV-GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE-DEKVILVG 170 (308)
Q Consensus 95 ~~~vvllHG~~--~~~~~~~~~~~~L~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~-~~~v~lvG 170 (308)
..|||+.||++ .....+..+.+.+.+. |+.+..+. -|-+.. ..-...+.+.++.+.+.+..... ..-+.+||
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~---~s~~~~~~~Qv~~vce~l~~~~~L~~G~naIG 101 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQ---DSLFMPLRQQASIACEKIKQMKELSEGYNIVA 101 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcc---cccccCHHHHHHHHHHHHhcchhhcCceEEEE
Confidence 45899999999 4455777788777533 66555544 222211 11223566666666666654221 23699999
Q ss_pred eChhHHHHHHHHHhCCc--cccEEEEEcccc
Q 021765 171 HSSGGACVSYALEHFPQ--KISKAIFLCATM 199 (308)
Q Consensus 171 hS~GG~~a~~~a~~~p~--~v~~lVli~~~~ 199 (308)
+|.||.++..++++.|+ .|+.+|.++++-
T Consensus 102 fSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 102 ESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred EcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 99999999999999876 599999998764
No 143
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.93 E-value=7.2e-05 Score=63.23 Aligned_cols=105 Identities=14% Similarity=0.219 Sum_probs=70.9
Q ss_pred eEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCC-----------------CCCCCCcCCHHHHHHHHHHHHH
Q 021765 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGID-----------------LSDTNSVTTLAEYSKPLLDYLE 158 (308)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S-----------------~~~~~~~~~~~~~~~~l~~~l~ 158 (308)
.+||++||.+.+...|..+++.|.-.+...+++.-|-.-.+ .........+...++.+..+++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~ 83 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLID 83 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHH
Confidence 48999999999999998888877666666676644321111 0000122234445555566665
Q ss_pred Hc---CC-CCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccC
Q 021765 159 NL---LE-DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 159 ~l---~~-~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~ 200 (308)
+. ++ ..+|.+-|.|+||.++++.+..++..+.+++...+..+
T Consensus 84 ~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p 129 (206)
T KOG2112|consen 84 NEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLP 129 (206)
T ss_pred HHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccc
Confidence 53 22 14789999999999999999999888888777666543
No 144
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.89 E-value=6.6e-05 Score=70.86 Aligned_cols=82 Identities=29% Similarity=0.398 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHCCCeE----E-E-eCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHc---CCCCcEEEEEeChhHHHHHH
Q 021765 110 CWYKTVASLEEVGLIP----T-A-LDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL---LEDEKVILVGHSSGGACVSY 180 (308)
Q Consensus 110 ~~~~~~~~L~~~G~~v----i-~-~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~v~lvGhS~GG~~a~~ 180 (308)
.|..+++.|.+.||.. + + +|+|-. ....+++...+...++.. . +++|+||||||||.++.+
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~---------~~~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~ 135 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLS---------PAERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARY 135 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhc---------hhhHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHH
Confidence 7999999999988752 2 2 687721 113344445555544443 3 459999999999999999
Q ss_pred HHHhCCc------cccEEEEEccccCC
Q 021765 181 ALEHFPQ------KISKAIFLCATMVS 201 (308)
Q Consensus 181 ~a~~~p~------~v~~lVli~~~~~~ 201 (308)
+....+. .|+++|.++++..-
T Consensus 136 fl~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 136 FLQWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred HHHhccchhhHHhhhhEEEEeCCCCCC
Confidence 9887643 59999999987643
No 145
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.89 E-value=0.00015 Score=71.76 Aligned_cols=108 Identities=18% Similarity=0.120 Sum_probs=64.5
Q ss_pred CceEEEEeCCCCCChhHHHHHHHHHHH----------------CCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHH
Q 021765 94 QYKKFVLIHGEGFGAWCWYKTVASLEE----------------VGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYL 157 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~----------------~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l 157 (308)
++-||+|++|..|+-..-+.++..... ..|..+++|+-+-= ..-...++.+.++-+.+.+
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~----tAm~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEF----TAMHGHILLDQTEYVNDAI 163 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchh----hhhccHhHHHHHHHHHHHH
Confidence 456999999999987766665544331 13566777764300 0002234555544444333
Q ss_pred HH---c-CC--------CCcEEEEEeChhHHHHHHHHHh---CCccccEEEEEccccCCCCCC
Q 021765 158 EN---L-LE--------DEKVILVGHSSGGACVSYALEH---FPQKISKAIFLCATMVSDGQR 205 (308)
Q Consensus 158 ~~---l-~~--------~~~v~lvGhS~GG~~a~~~a~~---~p~~v~~lVli~~~~~~~g~~ 205 (308)
+. + .. +..|++|||||||.+|..++.. .++.|.-+|.++++...+..+
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a~Pl~ 226 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAAPPLP 226 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccCCCCC
Confidence 22 1 11 2359999999999999877652 344577777777766554433
No 146
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.89 E-value=0.00013 Score=64.82 Aligned_cols=106 Identities=15% Similarity=0.175 Sum_probs=69.8
Q ss_pred CceEEEEeCCCCCChhHHHHHH--HHHH-HCCCeEEEeCC-CC------CCCCCCCCC---CcCCHHHHHHHHHHHHHHc
Q 021765 94 QYKKFVLIHGEGFGAWCWYKTV--ASLE-EVGLIPTALDL-KG------SGIDLSDTN---SVTTLAEYSKPLLDYLENL 160 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~--~~L~-~~G~~vi~~D~-~G------~G~S~~~~~---~~~~~~~~~~~l~~~l~~l 160 (308)
+.|.||.+||..++........ +.|+ ..||-|+.+|- ++ ++.+..+.. ...+.....+.+..++.+.
T Consensus 60 ~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~ 139 (312)
T COG3509 60 GAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEY 139 (312)
T ss_pred CCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHhc
Confidence 3478999999999887654332 3333 45899998852 21 222211111 1122333333344444555
Q ss_pred CCC-CcEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 161 LED-EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 161 ~~~-~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
+++ ++|++.|.|-||.++..++..+|+.+.++-.+++..
T Consensus 140 gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 140 GIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 543 589999999999999999999999999988888776
No 147
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.89 E-value=6.2e-05 Score=64.12 Aligned_cols=106 Identities=25% Similarity=0.237 Sum_probs=77.6
Q ss_pred CCceEEEEeCCCCCChh---HHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCC---CcE
Q 021765 93 IQYKKFVLIHGEGFGAW---CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLED---EKV 166 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~---~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~---~~v 166 (308)
-....|||+-|++..-- .-..+..+|.+.+|.++-+.++.+- ......++.++++++..+++++... .+|
T Consensus 34 v~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy----~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~v 109 (299)
T KOG4840|consen 34 VESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSY----NGYGTFSLKDDVEDLKCLLEHIQLCGFSTDV 109 (299)
T ss_pred ceEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccc----cccccccccccHHHHHHHHHHhhccCcccce
Confidence 34467899999987644 2346788899999999999876421 1123347888899999999877432 489
Q ss_pred EEEEeChhHHHHHHHHH--hCCccccEEEEEccccCCC
Q 021765 167 ILVGHSSGGACVSYALE--HFPQKISKAIFLCATMVSD 202 (308)
Q Consensus 167 ~lvGhS~GG~~a~~~a~--~~p~~v~~lVli~~~~~~~ 202 (308)
+|+|||.|..-.++++. ..+..|.+.|+.+|....+
T Consensus 110 VL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 110 VLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred EEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 99999999998877773 2456788888888775443
No 148
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.87 E-value=0.00041 Score=60.21 Aligned_cols=108 Identities=19% Similarity=0.189 Sum_probs=81.3
Q ss_pred CCCceEEEEeCCCCCChhHHHHHHHHHHHCC---CeEEEeCCCCCCCCC---C-----CCCCcCCHHHHHHHHHHHHHHc
Q 021765 92 NIQYKKFVLIHGEGFGAWCWYKTVASLEEVG---LIPTALDLKGSGIDL---S-----DTNSVTTLAEYSKPLLDYLENL 160 (308)
Q Consensus 92 ~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G---~~vi~~D~~G~G~S~---~-----~~~~~~~~~~~~~~l~~~l~~l 160 (308)
..+++.|++++|..+....|..++..|...- ..++++...||..-. . ...+..++++.++.-.++++..
T Consensus 26 ~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~ 105 (301)
T KOG3975|consen 26 GEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEY 105 (301)
T ss_pred CCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHh
Confidence 3456789999999999999988888775431 558888888876533 1 1124568899999888998775
Q ss_pred -CCCCcEEEEEeChhHHHHHHHHHhC--CccccEEEEEcccc
Q 021765 161 -LEDEKVILVGHSSGGACVSYALEHF--PQKISKAIFLCATM 199 (308)
Q Consensus 161 -~~~~~v~lvGhS~GG~~a~~~a~~~--p~~v~~lVli~~~~ 199 (308)
..+.+++++|||.|+++.+.+.... ...|.+++++-|.+
T Consensus 106 ~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 106 VPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred CCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 3446899999999999999887632 23578888887665
No 149
>PRK04940 hypothetical protein; Provisional
Probab=97.87 E-value=9.4e-05 Score=61.72 Aligned_cols=87 Identities=11% Similarity=0.125 Sum_probs=53.2
Q ss_pred EEEeCCCCCChhH--HHH-HHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHc---CCCCcEEEEEe
Q 021765 98 FVLIHGEGFGAWC--WYK-TVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL---LEDEKVILVGH 171 (308)
Q Consensus 98 vvllHG~~~~~~~--~~~-~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~v~lvGh 171 (308)
|+++||+.++... ... ....+ .-+.+++ +++ ...-.+.++.+.+.+..+ +..+++.|||+
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~-~p~~~~~--~l~-----------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGS 67 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFI-DPDVRLI--SYS-----------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGV 67 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheee-CCCCeEE--ECC-----------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEe
Confidence 7899999998887 432 12222 1123443 332 012233334444444431 11137999999
Q ss_pred ChhHHHHHHHHHhCCccccEEEEEccccCC
Q 021765 172 SSGGACVSYALEHFPQKISKAIFLCATMVS 201 (308)
Q Consensus 172 S~GG~~a~~~a~~~p~~v~~lVli~~~~~~ 201 (308)
|+||+.|.+++.++. + +.|+++|.+.+
T Consensus 68 SLGGyyA~~La~~~g--~-~aVLiNPAv~P 94 (180)
T PRK04940 68 GLGGYWAERIGFLCG--I-RQVIFNPNLFP 94 (180)
T ss_pred ChHHHHHHHHHHHHC--C-CEEEECCCCCh
Confidence 999999999999976 4 56788888643
No 150
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.87 E-value=0.00025 Score=67.36 Aligned_cols=115 Identities=14% Similarity=0.194 Sum_probs=69.1
Q ss_pred eeeEEEecC----CCceEEEEeCCCCCChh-HHHHHHHHHHHCCC----eEEEeCCCCC-CCCCCCCCCcCCHH-HHHHH
Q 021765 84 KQDTNILEN----IQYKKFVLIHGEGFGAW-CWYKTVASLEEVGL----IPTALDLKGS-GIDLSDTNSVTTLA-EYSKP 152 (308)
Q Consensus 84 ~~~~~~~~~----~~~~~vvllHG~~~~~~-~~~~~~~~L~~~G~----~vi~~D~~G~-G~S~~~~~~~~~~~-~~~~~ 152 (308)
..+.+|... ..-|+|+++||..-... .....++.|.+.|. .++.+|..+. ..+.. ......+. ..+++
T Consensus 194 r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~e-l~~~~~f~~~l~~e 272 (411)
T PRK10439 194 RRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQE-LPCNADFWLAVQQE 272 (411)
T ss_pred eEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCccccccc-CCchHHHHHHHHHH
Confidence 455566542 23578999999532111 11234455655563 3567775321 11111 11111222 23456
Q ss_pred HHHHHHHc-C---CCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 153 LLDYLENL-L---EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 153 l~~~l~~l-~---~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
|.-++++. . ..++.+|.|+||||..+++++.++|+.+.+++.+++..
T Consensus 273 LlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 273 LLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 66666654 1 12478999999999999999999999999999999875
No 151
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.72 E-value=4.2e-05 Score=68.08 Aligned_cols=106 Identities=14% Similarity=0.129 Sum_probs=56.6
Q ss_pred CCceEEEEeCCCCCCh---hHHHHHHHHHHHC--CCeEEEeCCCCCCCCCC-CCCCcCCHHHHHHHHHHHHHHcC-CCCc
Q 021765 93 IQYKKFVLIHGEGFGA---WCWYKTVASLEEV--GLIPTALDLKGSGIDLS-DTNSVTTLAEYSKPLLDYLENLL-EDEK 165 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~---~~~~~~~~~L~~~--G~~vi~~D~~G~G~S~~-~~~~~~~~~~~~~~l~~~l~~l~-~~~~ 165 (308)
+...|||+.||+|.+. ..+..+.+.+.+. |--|..++.- -+.+.. ...-...+.+.++.+.+.++... ...-
T Consensus 3 ~~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G 81 (279)
T PF02089_consen 3 PSPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPELANG 81 (279)
T ss_dssp TSS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-
T ss_pred CCCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcc
Confidence 3456999999999753 2454444443332 6667777652 221100 00011345666666666666532 1237
Q ss_pred EEEEEeChhHHHHHHHHHhCCc-cccEEEEEcccc
Q 021765 166 VILVGHSSGGACVSYALEHFPQ-KISKAIFLCATM 199 (308)
Q Consensus 166 v~lvGhS~GG~~a~~~a~~~p~-~v~~lVli~~~~ 199 (308)
+.+||+|.||.++..++++.++ .|+.+|.++++-
T Consensus 82 ~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 82 FNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred eeeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 9999999999999999999864 699999998764
No 152
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.71 E-value=0.00035 Score=63.91 Aligned_cols=106 Identities=19% Similarity=0.219 Sum_probs=74.2
Q ss_pred CCceEEEEeCCCCCChhHHH-HH-HHHHHHCCCeEEEeCCCCCCCCCCCCC---CcCCHHHH----------HHHHHHHH
Q 021765 93 IQYKKFVLIHGEGFGAWCWY-KT-VASLEEVGLIPTALDLKGSGIDLSDTN---SVTTLAEY----------SKPLLDYL 157 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~-~~-~~~L~~~G~~vi~~D~~G~G~S~~~~~---~~~~~~~~----------~~~l~~~l 157 (308)
..+|.+|.++|-|+.....+ .+ +..|.++|+..+.+..|-||.-..... ...+..|. +..+..++
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 34788889999877444332 34 677777799999999999986542211 11222222 23445566
Q ss_pred HHcCCCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 158 ENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 158 ~~l~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
+..+.. ++.+.|.||||.+|..++...|..|..+-.+++..
T Consensus 170 ~~~G~~-~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~s 210 (348)
T PF09752_consen 170 EREGYG-PLGLTGISMGGHMAALAASNWPRPVALVPCLSWSS 210 (348)
T ss_pred HhcCCC-ceEEEEechhHhhHHhhhhcCCCceeEEEeecccC
Confidence 666666 99999999999999999999998877666666544
No 153
>COG4099 Predicted peptidase [General function prediction only]
Probab=97.69 E-value=0.00011 Score=65.15 Aligned_cols=102 Identities=20% Similarity=0.170 Sum_probs=61.6
Q ss_pred eEEEEeCCCCCChhHHHHHH--------HHHHHCCCeEEEeCCCC-CCCCCCCCCCcCCHHHHHHHHHHHH-HHcCCC-C
Q 021765 96 KKFVLIHGEGFGAWCWYKTV--------ASLEEVGLIPTALDLKG-SGIDLSDTNSVTTLAEYSKPLLDYL-ENLLED-E 164 (308)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~--------~~L~~~G~~vi~~D~~G-~G~S~~~~~~~~~~~~~~~~l~~~l-~~l~~~-~ 164 (308)
|.|||+||.+.....-+... ....+.++-|+++.+-- +..++. ....-....++.+.+.+ ++.+++ +
T Consensus 192 PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~--~t~~~l~~~idli~~vlas~ynID~s 269 (387)
T COG4099 192 PLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE--KTLLYLIEKIDLILEVLASTYNIDRS 269 (387)
T ss_pred cEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc--ccchhHHHHHHHHHHHHhhccCcccc
Confidence 88999999998776543221 11122234455555311 111111 11112222333333233 333433 5
Q ss_pred cEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 165 KVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 165 ~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
+|.++|.|+||+.+..++.++|+.+.+.+++++..
T Consensus 270 RIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 270 RIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred eEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 89999999999999999999999999999998864
No 154
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.69 E-value=0.00032 Score=67.67 Aligned_cols=106 Identities=12% Similarity=0.128 Sum_probs=69.8
Q ss_pred CCceEEEEeCCCCCChhHHHHHHH-----------H-------HHHCCCeEEEeCCC-CCCCCCCCCC-CcCCHHHHHHH
Q 021765 93 IQYKKFVLIHGEGFGAWCWYKTVA-----------S-------LEEVGLIPTALDLK-GSGIDLSDTN-SVTTLAEYSKP 152 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~-----------~-------L~~~G~~vi~~D~~-G~G~S~~~~~-~~~~~~~~~~~ 152 (308)
.+.|+||+++|..+.+..+..+.+ . +.+ -..++.+|.| |+|.|..... ...+.++.+++
T Consensus 75 ~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~-~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d 153 (462)
T PTZ00472 75 PEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNN-EAYVIYVDQPAGVGFSYADKADYDHNESEVSED 153 (462)
T ss_pred CCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccccc-ccCeEEEeCCCCcCcccCCCCCCCCChHHHHHH
Confidence 346899999999888775532221 1 112 2578899976 8888865332 23355677777
Q ss_pred HHHHHHHc----CC--CCcEEEEEeChhHHHHHHHHHhC----------CccccEEEEEcccc
Q 021765 153 LLDYLENL----LE--DEKVILVGHSSGGACVSYALEHF----------PQKISKAIFLCATM 199 (308)
Q Consensus 153 l~~~l~~l----~~--~~~v~lvGhS~GG~~a~~~a~~~----------p~~v~~lVli~~~~ 199 (308)
+.++++.+ .. ..+++|+|||+||..+..++... .-.++++++-++..
T Consensus 154 ~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 154 MYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred HHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 77777643 11 24899999999999887766542 12467887777665
No 155
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.68 E-value=0.00025 Score=63.82 Aligned_cols=102 Identities=18% Similarity=0.228 Sum_probs=67.9
Q ss_pred CceEEEEeCCCCCChh--HHHHHHHHHHH-CCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCC-CCcEEEE
Q 021765 94 QYKKFVLIHGEGFGAW--CWYKTVASLEE-VGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE-DEKVILV 169 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~--~~~~~~~~L~~-~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~-~~~v~lv 169 (308)
...|+|+.||+|++.. ....+.+.+.+ .|..+.++.. |-+ .. ..-...+.+.++.+.+.+..... ..-+.+|
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g~~--~~-~s~~~~~~~Qve~vce~l~~~~~l~~G~naI 99 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-GNG--VG-DSWLMPLTQQAEIACEKVKQMKELSQGYNIV 99 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-CCC--cc-ccceeCHHHHHHHHHHHHhhchhhhCcEEEE
Confidence 3468999999987654 33445555543 2566666543 222 11 11233566677666666654221 2369999
Q ss_pred EeChhHHHHHHHHHhCCc--cccEEEEEcccc
Q 021765 170 GHSSGGACVSYALEHFPQ--KISKAIFLCATM 199 (308)
Q Consensus 170 GhS~GG~~a~~~a~~~p~--~v~~lVli~~~~ 199 (308)
|||.||.++..++++.|+ .|+.+|.++++-
T Consensus 100 GfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 100 GRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 999999999999999986 599999998764
No 156
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.66 E-value=0.00052 Score=65.72 Aligned_cols=109 Identities=21% Similarity=0.189 Sum_probs=68.5
Q ss_pred CCceEEEEeCCCCCChhHHH--HHHHHHH-HCCCeEEEeCCCCCCCCCCCC------CCcCCHHHHHHHHHHHHHHcC--
Q 021765 93 IQYKKFVLIHGEGFGAWCWY--KTVASLE-EVGLIPTALDLKGSGIDLSDT------NSVTTLAEYSKPLLDYLENLL-- 161 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~--~~~~~L~-~~G~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~~l~~~l~~l~-- 161 (308)
+++|++|++-|-+.-...|. .++..|+ +.|--++++++|-+|.|..-. ....+.++.++|+..+++.+.
T Consensus 27 ~~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 27 PGGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp TTSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 34777777766543332222 2333343 346689999999999986311 134578888888888887653
Q ss_pred ----CCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCC
Q 021765 162 ----EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (308)
Q Consensus 162 ----~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~ 201 (308)
...+++++|-|+||.++..+-.+||+.|.+.+.-++++..
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 2248999999999999999999999999998887776643
No 157
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=97.66 E-value=0.00015 Score=70.32 Aligned_cols=100 Identities=18% Similarity=0.149 Sum_probs=71.7
Q ss_pred ceEEEEeCCCCCC-----hhHHHHH--HHHHHHCCCeEEEeCCCCCCCCCC-------CCCCcCCHHHHHHHHHHHHHHc
Q 021765 95 YKKFVLIHGEGFG-----AWCWYKT--VASLEEVGLIPTALDLKGSGIDLS-------DTNSVTTLAEYSKPLLDYLENL 160 (308)
Q Consensus 95 ~~~vvllHG~~~~-----~~~~~~~--~~~L~~~G~~vi~~D~~G~G~S~~-------~~~~~~~~~~~~~~l~~~l~~l 160 (308)
-|+++++-|..+- ...|... ...|+..||-|+.+|-||...-.. ..-....++|.++-+.-+.++.
T Consensus 642 Yptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~ 721 (867)
T KOG2281|consen 642 YPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQT 721 (867)
T ss_pred CceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhc
Confidence 4789999887653 2233222 346888999999999999643221 1123446788888887777776
Q ss_pred CC--CCcEEEEEeChhHHHHHHHHHhCCccccEEEE
Q 021765 161 LE--DEKVILVGHSSGGACVSYALEHFPQKISKAIF 194 (308)
Q Consensus 161 ~~--~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVl 194 (308)
+. -.+|.|-|||+||++++....++|+-++.+|.
T Consensus 722 gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIA 757 (867)
T KOG2281|consen 722 GFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIA 757 (867)
T ss_pred CcccchheeEeccccccHHHHHHhhcCcceeeEEec
Confidence 42 14899999999999999999999986665543
No 158
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=97.57 E-value=0.00043 Score=70.60 Aligned_cols=103 Identities=20% Similarity=0.216 Sum_probs=74.1
Q ss_pred ceEEEEeCCCCCChh-------HHHHHHHHHHHCCCeEEEeCCCCCCCCCCC-------CCCcCCHHHHHHHHHHHHHHc
Q 021765 95 YKKFVLIHGEGFGAW-------CWYKTVASLEEVGLIPTALDLKGSGIDLSD-------TNSVTTLAEYSKPLLDYLENL 160 (308)
Q Consensus 95 ~~~vvllHG~~~~~~-------~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~l~~~l~~l 160 (308)
-|.+|.+||..++.. .|... .....|+.|+.+|.||.|..... ........|....+..+++..
T Consensus 526 yPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~ 603 (755)
T KOG2100|consen 526 YPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLP 603 (755)
T ss_pred CCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcc
Confidence 468888899886322 34333 45677999999999998765422 113346677777777777665
Q ss_pred CCC-CcEEEEEeChhHHHHHHHHHhCCccccEE-EEEcccc
Q 021765 161 LED-EKVILVGHSSGGACVSYALEHFPQKISKA-IFLCATM 199 (308)
Q Consensus 161 ~~~-~~v~lvGhS~GG~~a~~~a~~~p~~v~~l-Vli~~~~ 199 (308)
..+ +++.|.|||+||.+++.++...++.+-++ |.++|..
T Consensus 604 ~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVt 644 (755)
T KOG2100|consen 604 FIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVT 644 (755)
T ss_pred cccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEeccee
Confidence 443 58999999999999999999988555444 8888774
No 159
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.57 E-value=0.00042 Score=60.72 Aligned_cols=100 Identities=21% Similarity=0.247 Sum_probs=69.6
Q ss_pred eEEEEeCCCCCChhH--HHHHHHHHHHC-CCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcC-CCCcEEEEEe
Q 021765 96 KKFVLIHGEGFGAWC--WYKTVASLEEV-GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL-EDEKVILVGH 171 (308)
Q Consensus 96 ~~vvllHG~~~~~~~--~~~~~~~L~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~-~~~~v~lvGh 171 (308)
.|+|++||+++.... ...+.+.+.+. |..|+++|. |-|.- ......+.+.++.+.+.+.... ..+-+.++|.
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~---~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~ 99 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIK---DSSLMPLWEQVDVACEKVKQMPELSQGYNIVGY 99 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcc---hhhhccHHHHHHHHHHHHhcchhccCceEEEEE
Confidence 689999999988775 66666666654 678888886 33310 1122356666666666555332 1246999999
Q ss_pred ChhHHHHHHHHHhCCc-cccEEEEEcccc
Q 021765 172 SSGGACVSYALEHFPQ-KISKAIFLCATM 199 (308)
Q Consensus 172 S~GG~~a~~~a~~~p~-~v~~lVli~~~~ 199 (308)
|.||.++..+++..++ .|..+|.++++-
T Consensus 100 SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 100 SQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred ccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 9999999999987654 588888888764
No 160
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.55 E-value=0.0025 Score=60.92 Aligned_cols=80 Identities=16% Similarity=0.201 Sum_probs=58.2
Q ss_pred HHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHc---CCC-CcEEEEEeChhHHHHHHHHHhCCccc
Q 021765 114 TVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL---LED-EKVILVGHSSGGACVSYALEHFPQKI 189 (308)
Q Consensus 114 ~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l---~~~-~~v~lvGhS~GG~~a~~~a~~~p~~v 189 (308)
+-..|.. |+.|+.+.+.- .+.+..++.+.......+++.+ ..+ .+.+|||.+.||+.++.+|+.+|+.+
T Consensus 93 vG~AL~~-GHPvYFV~F~p------~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~ 165 (581)
T PF11339_consen 93 VGVALRA-GHPVYFVGFFP------EPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLV 165 (581)
T ss_pred HHHHHHc-CCCeEEEEecC------CCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCcc
Confidence 3445554 99998876541 2234458888877777777665 221 38999999999999999999999988
Q ss_pred cEEEEEccccC
Q 021765 190 SKAIFLCATMV 200 (308)
Q Consensus 190 ~~lVli~~~~~ 200 (308)
.-+|+-++++.
T Consensus 166 gplvlaGaPls 176 (581)
T PF11339_consen 166 GPLVLAGAPLS 176 (581)
T ss_pred CceeecCCCcc
Confidence 88877766653
No 161
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.55 E-value=0.00021 Score=69.44 Aligned_cols=107 Identities=22% Similarity=0.213 Sum_probs=62.8
Q ss_pred CCceEEEEeCCCCCC---hhHHHHHHHHHHHC--CCeEEEeCCC-C---CCCCCCC-CCCcCCHHHH---HHHHHHHHHH
Q 021765 93 IQYKKFVLIHGEGFG---AWCWYKTVASLEEV--GLIPTALDLK-G---SGIDLSD-TNSVTTLAEY---SKPLLDYLEN 159 (308)
Q Consensus 93 ~~~~~vvllHG~~~~---~~~~~~~~~~L~~~--G~~vi~~D~~-G---~G~S~~~-~~~~~~~~~~---~~~l~~~l~~ 159 (308)
...|+||++||.+.. ...+ ....|... ++.|+.+++| | +...... ......+.|. .+.+.+.++.
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~ 170 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAA 170 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 346899999996432 2221 12233333 3899999998 3 2222111 1111223333 3334444444
Q ss_pred cCC-CCcEEEEEeChhHHHHHHHHHh--CCccccEEEEEccccCC
Q 021765 160 LLE-DEKVILVGHSSGGACVSYALEH--FPQKISKAIFLCATMVS 201 (308)
Q Consensus 160 l~~-~~~v~lvGhS~GG~~a~~~a~~--~p~~v~~lVli~~~~~~ 201 (308)
++. ..+|+|.|||.||..+..++.. .+..++++|+.++....
T Consensus 171 fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~~ 215 (493)
T cd00312 171 FGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSALS 215 (493)
T ss_pred hCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCccC
Confidence 443 2589999999999988777664 23468899998876543
No 162
>COG3150 Predicted esterase [General function prediction only]
Probab=97.53 E-value=0.00063 Score=55.56 Aligned_cols=88 Identities=14% Similarity=0.139 Sum_probs=61.6
Q ss_pred EEEeCCCCCChhHHHHH--HHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhH
Q 021765 98 FVLIHGEGFGAWCWYKT--VASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (308)
Q Consensus 98 vvllHG~~~~~~~~~~~--~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG 175 (308)
||++||+.++....+.. .+.+... ...+.+.-| .......+.++.+..++..++.. ...|+|-|+||
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~-~~~i~y~~p---------~l~h~p~~a~~ele~~i~~~~~~-~p~ivGssLGG 70 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED-VRDIEYSTP---------HLPHDPQQALKELEKAVQELGDE-SPLIVGSSLGG 70 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc-ccceeeecC---------CCCCCHHHHHHHHHHHHHHcCCC-CceEEeecchH
Confidence 89999999988877643 3344432 222222211 12346788889999999988865 68999999999
Q ss_pred HHHHHHHHhCCccccEEEEEcccc
Q 021765 176 ACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 176 ~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
+.+.+++.++. ++. |++.|..
T Consensus 71 Y~At~l~~~~G--ira-v~~NPav 91 (191)
T COG3150 71 YYATWLGFLCG--IRA-VVFNPAV 91 (191)
T ss_pred HHHHHHHHHhC--Chh-hhcCCCc
Confidence 99999999865 544 4455554
No 163
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.49 E-value=0.0014 Score=56.07 Aligned_cols=104 Identities=15% Similarity=0.074 Sum_probs=64.1
Q ss_pred CceEEEEeCCCCCChhHHH----HHHHHHHHCCCeEEEeCCCC---------CCCC-----------------CCCC---
Q 021765 94 QYKKFVLIHGEGFGAWCWY----KTVASLEEVGLIPTALDLKG---------SGID-----------------LSDT--- 140 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~----~~~~~L~~~G~~vi~~D~~G---------~G~S-----------------~~~~--- 140 (308)
.++-|+|+||+-.+...|. .+-+.|.+. +..+.+|-|- ...+ ..+.
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 3578999999999988775 344555554 6677666651 0000 0000
Q ss_pred CCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhC--C----c--cccEEEEEccccC
Q 021765 141 NSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHF--P----Q--KISKAIFLCATMV 200 (308)
Q Consensus 141 ~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~--p----~--~v~~lVli~~~~~ 200 (308)
......+.-.+-|.+.+...+. ==.|+|+|.|+.++..++..- . . .++-+|+++++.+
T Consensus 83 ~~~~~~eesl~yl~~~i~enGP--FDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~ 148 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKENGP--FDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKF 148 (230)
T ss_pred ccccChHHHHHHHHHHHHHhCC--CccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCC
Confidence 0112344556667777777664 237899999999998887621 1 0 3567777777653
No 164
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.42 E-value=0.00013 Score=63.12 Aligned_cols=54 Identities=26% Similarity=0.418 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHcCC--CCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCCC
Q 021765 148 EYSKPLLDYLENLLE--DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSD 202 (308)
Q Consensus 148 ~~~~~l~~~l~~l~~--~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~~ 202 (308)
++.+...++|+.... .++|.|+|.|.||-+|+.+|..+| .|+++|.+++.....
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~ 59 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVF 59 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEe
Confidence 345556667766532 248999999999999999999998 799999999876554
No 165
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=97.41 E-value=0.005 Score=56.73 Aligned_cols=118 Identities=18% Similarity=0.166 Sum_probs=76.5
Q ss_pred ccCCeeeEEEecC-----CCceEEEEeCCCCCC-----hhHHHHHHHHH-HHCCCeEEEeCCCCCCCCCCCCCCcCCHHH
Q 021765 80 LSNGKQDTNILEN-----IQYKKFVLIHGEGFG-----AWCWYKTVASL-EEVGLIPTALDLKGSGIDLSDTNSVTTLAE 148 (308)
Q Consensus 80 ~~~~~~~~~~~~~-----~~~~~vvllHG~~~~-----~~~~~~~~~~L-~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~ 148 (308)
..++..+.+|.+. ...|.||++||.|.- ...+..+...+ .+.+..|+.+|||=--+.. -...++|
T Consensus 70 ~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~----~Pa~y~D 145 (336)
T KOG1515|consen 70 PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHP----FPAAYDD 145 (336)
T ss_pred CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCC----CCccchH
Confidence 3344455566532 345799999998642 33566666666 4457889999998433222 2235556
Q ss_pred HHHHHHHHHHH----cCC-CCcEEEEEeChhHHHHHHHHHhC------CccccEEEEEccccCC
Q 021765 149 YSKPLLDYLEN----LLE-DEKVILVGHSSGGACVSYALEHF------PQKISKAIFLCATMVS 201 (308)
Q Consensus 149 ~~~~l~~~l~~----l~~-~~~v~lvGhS~GG~~a~~~a~~~------p~~v~~lVli~~~~~~ 201 (308)
-...+..++++ .+. .++|+|.|-|.||.+|..++.+. +.++++.|++-|....
T Consensus 146 ~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~ 209 (336)
T KOG1515|consen 146 GWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQG 209 (336)
T ss_pred HHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCC
Confidence 55555555543 122 24899999999999887776542 3579999999887643
No 166
>COG0627 Predicted esterase [General function prediction only]
Probab=97.27 E-value=0.00095 Score=61.01 Aligned_cols=109 Identities=17% Similarity=0.199 Sum_probs=70.0
Q ss_pred CceEEEEeCCCCCChhHHH---HHHHHHHHCCCeEEEeCCC--------------CCCCCCCCC------CC-cCCHHHH
Q 021765 94 QYKKFVLIHGEGFGAWCWY---KTVASLEEVGLIPTALDLK--------------GSGIDLSDT------NS-VTTLAEY 149 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~---~~~~~L~~~G~~vi~~D~~--------------G~G~S~~~~------~~-~~~~~~~ 149 (308)
.-|+++++||..++...|. .+-......|+.++++|-. |-+.|-... .. .+.++++
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tf 132 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETF 132 (316)
T ss_pred CCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHH
Confidence 3478888999888865443 3444555567777776332 222221100 01 1455555
Q ss_pred -HHHHHHHHH-HcCCCC---cEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCCC
Q 021765 150 -SKPLLDYLE-NLLEDE---KVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSD 202 (308)
Q Consensus 150 -~~~l~~~l~-~l~~~~---~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~~ 202 (308)
.+++-..++ ...... +..++||||||.-|+.+|.++|++++.+..+++...+.
T Consensus 133 l~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 133 LTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 345554444 333221 68999999999999999999999999999888877554
No 167
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.23 E-value=0.0037 Score=53.09 Aligned_cols=104 Identities=23% Similarity=0.240 Sum_probs=62.7
Q ss_pred ceEEEEeCCCCCCh-hHHH---------------HHHHHHHHCCCeEEEeCCCC---CCCCCCCC-CCcCCHHHHHHHH-
Q 021765 95 YKKFVLIHGEGFGA-WCWY---------------KTVASLEEVGLIPTALDLKG---SGIDLSDT-NSVTTLAEYSKPL- 153 (308)
Q Consensus 95 ~~~vvllHG~~~~~-~~~~---------------~~~~~L~~~G~~vi~~D~~G---~G~S~~~~-~~~~~~~~~~~~l- 153 (308)
.+.+||+||.|--. ..|. ++++...+.||.|+..+.-. +-.+...+ ....+-.+.+.-+
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw 180 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVW 180 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHH
Confidence 45899999987532 2442 34455566799999987431 11111111 1111222222222
Q ss_pred HHHHHHcCCCCcEEEEEeChhHHHHHHHHHhCCc--cccEEEEEcccc
Q 021765 154 LDYLENLLEDEKVILVGHSSGGACVSYALEHFPQ--KISKAIFLCATM 199 (308)
Q Consensus 154 ~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p~--~v~~lVli~~~~ 199 (308)
..++..... +.+.+|.||+||...+.++.++|+ +|.++.+.++++
T Consensus 181 ~~~v~pa~~-~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 181 KNIVLPAKA-ESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHHhcccCc-ceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 223333333 489999999999999999999875 677777777764
No 168
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.21 E-value=0.0013 Score=59.50 Aligned_cols=72 Identities=21% Similarity=0.221 Sum_probs=44.0
Q ss_pred HHHHHHHHCCCeEEEeCCCCCCCCCCCC-CCcCCHHHHHHHHHHHHHHcC--CCCcEEEEEeChhHHHHHHHHHh
Q 021765 113 KTVASLEEVGLIPTALDLKGSGIDLSDT-NSVTTLAEYSKPLLDYLENLL--EDEKVILVGHSSGGACVSYALEH 184 (308)
Q Consensus 113 ~~~~~L~~~G~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~l~~~l~~l~--~~~~v~lvGhS~GG~~a~~~a~~ 184 (308)
.++..+.++||.|+++|+.|.|..-... ......-|.++...++....+ .+.++.++|||.||..+..+++.
T Consensus 17 ~~l~~~L~~GyaVv~pDY~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l 91 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPDYEGLGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAEL 91 (290)
T ss_pred HHHHHHHHCCCEEEecCCCCCCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHH
Confidence 4566667889999999999998621110 011122233333333322222 23589999999999988776654
No 169
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.18 E-value=0.0029 Score=58.81 Aligned_cols=105 Identities=18% Similarity=0.139 Sum_probs=66.5
Q ss_pred CceEEEEeCCCCCChh----HHH---HHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcE
Q 021765 94 QYKKFVLIHGEGFGAW----CWY---KTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKV 166 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~----~~~---~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v 166 (308)
+.|+||++||.|-... ... .+...|. ...++++|+.-...-.....-...+.+.++....+++..+.. +|
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~-nI 197 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNK-NI 197 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCC-eE
Confidence 4689999999875433 221 2333333 368999998643200011122345666666666666566665 99
Q ss_pred EEEEeChhHHHHHHHHHhCC--c---cccEEEEEccccCC
Q 021765 167 ILVGHSSGGACVSYALEHFP--Q---KISKAIFLCATMVS 201 (308)
Q Consensus 167 ~lvGhS~GG~~a~~~a~~~p--~---~v~~lVli~~~~~~ 201 (308)
+|+|-|.||.+++.+.+... + .-+++|+++|..-.
T Consensus 198 ~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 198 ILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred EEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 99999999998876665321 1 24789999998743
No 170
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.15 E-value=0.013 Score=48.94 Aligned_cols=54 Identities=20% Similarity=0.340 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHcC----CCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCC
Q 021765 148 EYSKPLLDYLENLL----EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (308)
Q Consensus 148 ~~~~~l~~~l~~l~----~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~ 201 (308)
.-+..+..+++.+. .+..+.++|||+|+.++..++...+..+..+|+++++...
T Consensus 89 ~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 89 AGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMG 146 (177)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCC
Confidence 34556666666653 2348999999999999999988867789999999887543
No 171
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.14 E-value=0.00088 Score=56.80 Aligned_cols=105 Identities=19% Similarity=0.156 Sum_probs=67.6
Q ss_pred ceEEEEeCCCCCChhHHH---HHHHHHHHCCCeEEEeCC--CCCCCCCCCC---------------C----CcCCHHHH-
Q 021765 95 YKKFVLIHGEGFGAWCWY---KTVASLEEVGLIPTALDL--KGSGIDLSDT---------------N----SVTTLAEY- 149 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~~~---~~~~~L~~~G~~vi~~D~--~G~G~S~~~~---------------~----~~~~~~~~- 149 (308)
-|++.++-|+..+.+.|. .+-+...++|+.|+.+|- ||......+. . ..+.+-++
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv 123 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYV 123 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHH
Confidence 478999999999988764 344556678999999985 3432111000 0 01122222
Q ss_pred HHHHHHHHHHcC--C-CCcEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 150 SKPLLDYLENLL--E-DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 150 ~~~l~~~l~~l~--~-~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
++++.+.+..-. . ..++.|.||||||.-|+..+.+.|.+.+.+-..+|..
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~ 176 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPIC 176 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecccccc
Confidence 345555554211 1 1479999999999999888888888888777776654
No 172
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.13 E-value=0.00093 Score=65.04 Aligned_cols=91 Identities=15% Similarity=0.203 Sum_probs=56.5
Q ss_pred hHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCC-CCcCCHHHHHHHHHHHHHH---cCCCCcEEEEEeChhHHHHHHHHHh
Q 021765 109 WCWYKTVASLEEVGLIPTALDLKGSGIDLSDT-NSVTTLAEYSKPLLDYLEN---LLEDEKVILVGHSSGGACVSYALEH 184 (308)
Q Consensus 109 ~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~l~~~l~~---l~~~~~v~lvGhS~GG~~a~~~a~~ 184 (308)
+.|..+++.|.+.||. -.++.|-....... ......+++-..+...++. +..+++|+||||||||.+++++...
T Consensus 156 ~vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 156 FVWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred eeHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHh
Confidence 3678999999999997 34444432221111 1111234444444444443 3333599999999999999987763
Q ss_pred CC---------------ccccEEEEEccccCC
Q 021765 185 FP---------------QKISKAIFLCATMVS 201 (308)
Q Consensus 185 ~p---------------~~v~~lVli~~~~~~ 201 (308)
.. ..|++.|.++++..-
T Consensus 234 v~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 234 VEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred ccccccccCCcchHHHHHHHHHheecccccCC
Confidence 21 248899999887544
No 173
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.06 E-value=0.0019 Score=52.52 Aligned_cols=38 Identities=24% Similarity=0.292 Sum_probs=30.5
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCc----cccEEEEEccccCC
Q 021765 164 EKVILVGHSSGGACVSYALEHFPQ----KISKAIFLCATMVS 201 (308)
Q Consensus 164 ~~v~lvGhS~GG~~a~~~a~~~p~----~v~~lVli~~~~~~ 201 (308)
.+++++|||+||.+|..++..... .+..++.++++.+.
T Consensus 28 ~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~ 69 (153)
T cd00741 28 YKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVG 69 (153)
T ss_pred CeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCccc
Confidence 489999999999999988876654 56778888877654
No 174
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=96.92 E-value=0.0043 Score=53.20 Aligned_cols=107 Identities=15% Similarity=0.122 Sum_probs=69.4
Q ss_pred CceEEEEeCCCCCChh-HHHHHHHHHHHCCCeEEEeCCC-CCCCCCC-CCC---------CcCCHHHHHHHHHHHHHHcC
Q 021765 94 QYKKFVLIHGEGFGAW-CWYKTVASLEEVGLIPTALDLK-GSGIDLS-DTN---------SVTTLAEYSKPLLDYLENLL 161 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~-~~~~~~~~L~~~G~~vi~~D~~-G~G~S~~-~~~---------~~~~~~~~~~~l~~~l~~l~ 161 (308)
++..||++--+.+... .-...+..++.+||.|+.+|+. |--.+.. +.. ........+..+.++|+..+
T Consensus 38 ~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g 117 (242)
T KOG3043|consen 38 SKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHG 117 (242)
T ss_pred CCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcC
Confidence 3346777766555544 3667888999999999999974 4222221 110 11122233445555666556
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCC
Q 021765 162 EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (308)
Q Consensus 162 ~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~ 201 (308)
...+|.++|.+|||-++..+....| .+.++|.+-|..+.
T Consensus 118 ~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d 156 (242)
T KOG3043|consen 118 DSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVD 156 (242)
T ss_pred CcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCC
Confidence 5568999999999999888877766 67777777665543
No 175
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=96.89 E-value=0.0031 Score=60.00 Aligned_cols=106 Identities=25% Similarity=0.298 Sum_probs=66.3
Q ss_pred CceEEEEeCCCCCC----hhHHHHHHHHHHHCC-CeEEEeCCC-C-CCC---CCCC----CCCcCCHHHHH---HHHHHH
Q 021765 94 QYKKFVLIHGEGFG----AWCWYKTVASLEEVG-LIPTALDLK-G-SGI---DLSD----TNSVTTLAEYS---KPLLDY 156 (308)
Q Consensus 94 ~~~~vvllHG~~~~----~~~~~~~~~~L~~~G-~~vi~~D~~-G-~G~---S~~~----~~~~~~~~~~~---~~l~~~ 156 (308)
+.|++|+|||.+.. ...++ --..|+++| +-|+++++| | .|. +... ......+.|.+ +.+.+-
T Consensus 93 ~~PVmV~IHGG~y~~Gs~s~~~y-dgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~N 171 (491)
T COG2272 93 KLPVMVYIHGGGYIMGSGSEPLY-DGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDN 171 (491)
T ss_pred CCcEEEEEeccccccCCCccccc-ChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHH
Confidence 35899999997532 22222 223577777 888999987 2 222 1111 00112344443 455667
Q ss_pred HHHcCC-CCcEEEEEeChhHHHHHHHHHh--CCccccEEEEEccccC
Q 021765 157 LENLLE-DEKVILVGHSSGGACVSYALEH--FPQKISKAIFLCATMV 200 (308)
Q Consensus 157 l~~l~~-~~~v~lvGhS~GG~~a~~~a~~--~p~~v~~lVli~~~~~ 200 (308)
|+.++- .++|.|.|+|.|++.++.++.. ....+.++|+.++...
T Consensus 172 Ie~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 172 IEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 777754 3689999999999977766653 2235888888888775
No 176
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=96.80 E-value=0.0033 Score=61.38 Aligned_cols=108 Identities=22% Similarity=0.214 Sum_probs=59.0
Q ss_pred ceEEEEeCCCCCC---h-hHHHHHHHHHHHCCCeEEEeCCC----CCCCCCCCC-C-CcCCHHHHH---HHHHHHHHHcC
Q 021765 95 YKKFVLIHGEGFG---A-WCWYKTVASLEEVGLIPTALDLK----GSGIDLSDT-N-SVTTLAEYS---KPLLDYLENLL 161 (308)
Q Consensus 95 ~~~vvllHG~~~~---~-~~~~~~~~~L~~~G~~vi~~D~~----G~G~S~~~~-~-~~~~~~~~~---~~l~~~l~~l~ 161 (308)
-|++|+|||.+.. . .....-...+..++.-|+++++| |+-.+.... . ....+.|.. +.|.+-|..++
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FG 204 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFG 204 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGT
T ss_pred cceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhcc
Confidence 5899999996532 2 12222333455668999999998 332221111 1 222344443 33444455554
Q ss_pred C-CCcEEEEEeChhHHHHHHHHHh--CCccccEEEEEccccCCC
Q 021765 162 E-DEKVILVGHSSGGACVSYALEH--FPQKISKAIFLCATMVSD 202 (308)
Q Consensus 162 ~-~~~v~lvGhS~GG~~a~~~a~~--~p~~v~~lVli~~~~~~~ 202 (308)
- ..+|.|.|||.||..+...+.. -...++++|+.++.....
T Consensus 205 GDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~~~ 248 (535)
T PF00135_consen 205 GDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSALSP 248 (535)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TTST
T ss_pred cCCcceeeeeecccccccceeeeccccccccccccccccccccc
Confidence 3 2589999999999977655543 234799999999965443
No 177
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.75 E-value=0.0042 Score=49.36 Aligned_cols=36 Identities=28% Similarity=0.445 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHh
Q 021765 148 EYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEH 184 (308)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~ 184 (308)
...+.+.++++.... .++++.|||+||.+|..++..
T Consensus 49 ~~~~~l~~~~~~~~~-~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 49 QILDALKELVEKYPD-YSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHSTT-SEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccC-ccchhhccchHHHHHHHHHHh
Confidence 334455555555553 489999999999998877664
No 178
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.65 E-value=0.011 Score=55.02 Aligned_cols=105 Identities=16% Similarity=0.133 Sum_probs=71.8
Q ss_pred eEEEEeCCCCCChhHHHH---HHHHH-HHCCCeEEEeCCCCCCCCCCCCC---------CcCCHHHHHHHHHHHHHHcCC
Q 021765 96 KKFVLIHGEGFGAWCWYK---TVASL-EEVGLIPTALDLKGSGIDLSDTN---------SVTTLAEYSKPLLDYLENLLE 162 (308)
Q Consensus 96 ~~vvllHG~~~~~~~~~~---~~~~L-~~~G~~vi~~D~~G~G~S~~~~~---------~~~~~~~~~~~l~~~l~~l~~ 162 (308)
-+|+|.-|.-++-+.|.. ++-.+ .+.+--++-.++|-+|+|..-.. ...+.++..+|...++..+..
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 678888898888776542 22222 33345688889999999853111 222444555555555555432
Q ss_pred -----CCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccC
Q 021765 163 -----DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 163 -----~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~ 200 (308)
..+|+.+|-|+||+++..+-.+||+-|.+.+.-++++.
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVL 203 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceE
Confidence 25899999999999999999999999888776666553
No 179
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.57 E-value=0.024 Score=49.57 Aligned_cols=94 Identities=17% Similarity=0.045 Sum_probs=54.6
Q ss_pred EEEEeCCCCC--Chh-HHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHH-HHH---HHHHHHH-cCC---CCc
Q 021765 97 KFVLIHGEGF--GAW-CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEY-SKP---LLDYLEN-LLE---DEK 165 (308)
Q Consensus 97 ~vvllHG~~~--~~~-~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~-~~~---l~~~l~~-l~~---~~~ 165 (308)
+|=|+-|..- ... .|..+.+.|.++||.|++.-+.- +. +. ....+. ... +.+.+.. .+. .-+
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-tf-----DH-~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP 91 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-TF-----DH-QAIAREVWERFERCLRALQKRGGLDPAYLP 91 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-CC-----cH-HHHHHHHHHHHHHHHHHHHHhcCCCcccCC
Confidence 4556666432 233 57789999999999999976531 10 00 011111 111 1112221 111 126
Q ss_pred EEEEEeChhHHHHHHHHHhCCccccEEEEEcc
Q 021765 166 VILVGHSSGGACVSYALEHFPQKISKAIFLCA 197 (308)
Q Consensus 166 v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~ 197 (308)
+.-||||+|+-+-+.+...++..-++-|+++-
T Consensus 92 ~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 92 VYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred eeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 78899999999888888777655566666654
No 180
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.55 E-value=0.0054 Score=58.00 Aligned_cols=85 Identities=25% Similarity=0.394 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHHCCCe----E--EEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHH---cCCCCcEEEEEeChhHHHHH
Q 021765 109 WCWYKTVASLEEVGLI----P--TALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN---LLEDEKVILVGHSSGGACVS 179 (308)
Q Consensus 109 ~~~~~~~~~L~~~G~~----v--i~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~---l~~~~~v~lvGhS~GG~~a~ 179 (308)
+.|..+++.|..-||. + ..+|+|= |.. .....+++...+...++. +...++|+||+|||||.+..
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~~---~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~l 197 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRL---SYH---NSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVL 197 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhh---ccC---ChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHH
Confidence 5889999999988886 3 3457662 111 112344444444444443 23335999999999999999
Q ss_pred HHHHhCCc--------cccEEEEEcccc
Q 021765 180 YALEHFPQ--------KISKAIFLCATM 199 (308)
Q Consensus 180 ~~a~~~p~--------~v~~lVli~~~~ 199 (308)
+++..++. -|+++|-++++-
T Consensus 198 yFl~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 198 YFLKWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred HHHhcccccchhHHHHHHHHHHccCchh
Confidence 99988776 255566555543
No 181
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.33 E-value=0.025 Score=55.62 Aligned_cols=126 Identities=13% Similarity=0.114 Sum_probs=81.8
Q ss_pred eEEEeeccCCeeeEE---Ee----cCCCceEEEEeCCCCCChh--HHHHHHHHHHHCCCeEEEeCCCCCCCCCC------
Q 021765 74 RTLSESLSNGKQDTN---IL----ENIQYKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDLS------ 138 (308)
Q Consensus 74 ~~~~~~~~~~~~~~~---~~----~~~~~~~vvllHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~------ 138 (308)
+.+-.+..+|.++.+ +. -+++.|+++..-|.-+..- .|....-.|.++|+-......||=|.-..
T Consensus 420 ~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~G 499 (682)
T COG1770 420 RRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDG 499 (682)
T ss_pred EEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhh
Confidence 344445566666542 22 2345677777766544322 33333335678887666666677543221
Q ss_pred -CCCCcCCHHHHHHHHHHHHHHcC-CCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 139 -DTNSVTTLAEYSKPLLDYLENLL-EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 139 -~~~~~~~~~~~~~~l~~~l~~l~-~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
......++.|+++....+++.-. ..+.+++.|-|.||+++..++...|+.+.++|.--|++
T Consensus 500 K~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFV 562 (682)
T COG1770 500 KLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFV 562 (682)
T ss_pred hhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCcc
Confidence 11234588888887777765532 23589999999999999999999999999999877765
No 182
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.24 E-value=0.029 Score=53.49 Aligned_cols=109 Identities=17% Similarity=0.194 Sum_probs=80.5
Q ss_pred CCCceEEEEeCCCCCChhHHH-----HHHHHHHHCCCeEEEeCCCCCCCCCCCCC------CcCCHHHHHHHHHHHHHHc
Q 021765 92 NIQYKKFVLIHGEGFGAWCWY-----KTVASLEEVGLIPTALDLKGSGIDLSDTN------SVTTLAEYSKPLLDYLENL 160 (308)
Q Consensus 92 ~~~~~~vvllHG~~~~~~~~~-----~~~~~L~~~G~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~l~~~l~~l 160 (308)
..++|..++|-|-+.-...|- .+.....+.|-.|+-+++|-+|.|..... ...+..+...|+.++++.+
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 456788889988766554441 23344455588999999999998753222 2235667778888888776
Q ss_pred CCC------CcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccC
Q 021765 161 LED------EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 161 ~~~------~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~ 200 (308)
+.. .+.+.+|-|+-|.++..+=+.+|+.+.+.|.-++++.
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 431 3899999999999999999999999988887666654
No 183
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.08 E-value=0.018 Score=50.19 Aligned_cols=50 Identities=26% Similarity=0.332 Sum_probs=36.4
Q ss_pred HHHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhC----CccccEEEEEccccCCC
Q 021765 151 KPLLDYLENLLEDEKVILVGHSSGGACVSYALEHF----PQKISKAIFLCATMVSD 202 (308)
Q Consensus 151 ~~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~----p~~v~~lVli~~~~~~~ 202 (308)
+-+..+++... .++.+.|||.||.+|.+++... .++|.+++..+++....
T Consensus 73 ~yl~~~~~~~~--~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~~ 126 (224)
T PF11187_consen 73 AYLKKIAKKYP--GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFSE 126 (224)
T ss_pred HHHHHHHHhCC--CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCCh
Confidence 33344444433 2699999999999999998874 34788999888876544
No 184
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.06 E-value=0.017 Score=50.29 Aligned_cols=36 Identities=25% Similarity=0.230 Sum_probs=24.4
Q ss_pred CcEEEEEeChhHHHHHHHHHhCC----ccccEEEEEcccc
Q 021765 164 EKVILVGHSSGGACVSYALEHFP----QKISKAIFLCATM 199 (308)
Q Consensus 164 ~~v~lvGhS~GG~~a~~~a~~~p----~~v~~lVli~~~~ 199 (308)
.++++.|||+||.+|..++.... ...-.++.++++.
T Consensus 128 ~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~ 167 (229)
T cd00519 128 YKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPR 167 (229)
T ss_pred ceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCC
Confidence 48999999999999987776432 2223355555543
No 185
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=95.98 E-value=0.044 Score=51.77 Aligned_cols=109 Identities=13% Similarity=0.120 Sum_probs=67.8
Q ss_pred CCceEEEEeCCCCCChhHHHHHHHH----HH--------H------CCCeEEEeCCC-CCCCCCCCCCC--cCCHHHHHH
Q 021765 93 IQYKKFVLIHGEGFGAWCWYKTVAS----LE--------E------VGLIPTALDLK-GSGIDLSDTNS--VTTLAEYSK 151 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~----L~--------~------~G~~vi~~D~~-G~G~S~~~~~~--~~~~~~~~~ 151 (308)
.+.|.||.+.|..+.+..|..+.+. +. . +-.+++-+|.| |.|.|...... ..+.++.++
T Consensus 38 ~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~ 117 (415)
T PF00450_consen 38 EDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAE 117 (415)
T ss_dssp CSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHH
T ss_pred CCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeecCceEEeeccccccccchhhHHHH
Confidence 4568999999999988877443321 11 0 12579999965 89998654432 346777888
Q ss_pred HHHHHHHHc----C--CCCcEEEEEeChhHHHHHHHHH----hC------CccccEEEEEccccCC
Q 021765 152 PLLDYLENL----L--EDEKVILVGHSSGGACVSYALE----HF------PQKISKAIFLCATMVS 201 (308)
Q Consensus 152 ~l~~~l~~l----~--~~~~v~lvGhS~GG~~a~~~a~----~~------p~~v~~lVli~~~~~~ 201 (308)
++.++|+.+ . ...++.|.|.|+||..+..+|. .. +-.++++++.++...+
T Consensus 118 ~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 118 DLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred HHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 887777664 1 1238999999999996655544 23 3357898888877643
No 186
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=95.85 E-value=0.037 Score=47.63 Aligned_cols=82 Identities=17% Similarity=0.167 Sum_probs=54.9
Q ss_pred CCceEEEEeCCCCCChhHHHHHHHHHHHCCCeE-EEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEe
Q 021765 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIP-TALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGH 171 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~v-i~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 171 (308)
.++..|||+.|||.+...+..+. + ..++.| +++|++.... +. + +. .. +.|.||||
T Consensus 9 ~~~~LilfF~GWg~d~~~f~hL~--~-~~~~D~l~~yDYr~l~~---------d~-----~----~~--~y-~~i~lvAW 64 (213)
T PF04301_consen 9 NGKELILFFAGWGMDPSPFSHLI--L-PENYDVLICYDYRDLDF---------DF-----D----LS--GY-REIYLVAW 64 (213)
T ss_pred CCCeEEEEEecCCCChHHhhhcc--C-CCCccEEEEecCccccc---------cc-----c----cc--cC-ceEEEEEE
Confidence 34579999999999998886653 1 224654 5678863211 10 1 11 22 38999999
Q ss_pred ChhHHHHHHHHHhCCccccEEEEEccccC
Q 021765 172 SSGGACVSYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 172 S~GG~~a~~~a~~~p~~v~~lVli~~~~~ 200 (308)
|||-.+|..+....| ++..|.|++.+.
T Consensus 65 SmGVw~A~~~l~~~~--~~~aiAINGT~~ 91 (213)
T PF04301_consen 65 SMGVWAANRVLQGIP--FKRAIAINGTPY 91 (213)
T ss_pred eHHHHHHHHHhccCC--cceeEEEECCCC
Confidence 999999988876543 677777776653
No 187
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=95.83 E-value=0.032 Score=51.87 Aligned_cols=87 Identities=17% Similarity=0.150 Sum_probs=61.6
Q ss_pred CceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHc----CCCCcEEEE
Q 021765 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL----LEDEKVILV 169 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~v~lv 169 (308)
+...-||+.|=|+..+.=+.+.++|.++|+.|+.+|---+=.+. .+-++.+.|+..+++.. +.. +++|+
T Consensus 259 sd~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~------rtPe~~a~Dl~r~i~~y~~~w~~~-~~~li 331 (456)
T COG3946 259 SDTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSE------RTPEQIAADLSRLIRFYARRWGAK-RVLLI 331 (456)
T ss_pred cceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhcc------CCHHHHHHHHHHHHHHHHHhhCcc-eEEEE
Confidence 34466788887777776678999999999999999954333332 24455566665555544 344 89999
Q ss_pred EeChhHHHHHHHHHhCCc
Q 021765 170 GHSSGGACVSYALEHFPQ 187 (308)
Q Consensus 170 GhS~GG~~a~~~a~~~p~ 187 (308)
|+|+|+=+.-.+-.+.|.
T Consensus 332 GySfGADvlP~~~n~L~~ 349 (456)
T COG3946 332 GYSFGADVLPFAYNRLPP 349 (456)
T ss_pred eecccchhhHHHHHhCCH
Confidence 999999987766666554
No 188
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=95.80 E-value=0.027 Score=48.18 Aligned_cols=63 Identities=17% Similarity=0.087 Sum_probs=42.7
Q ss_pred CeEEEeCCCCCCCCCCC----C----CCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhC
Q 021765 123 LIPTALDLKGSGIDLSD----T----NSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHF 185 (308)
Q Consensus 123 ~~vi~~D~~G~G~S~~~----~----~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~ 185 (308)
.+|+++=+|-....... . .....+.|..+....+|++.+.+.+++|+|||.|+.+...++..+
T Consensus 46 ~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 46 CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 67888877642221110 0 011244566666777888887777999999999999999988764
No 189
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=95.39 E-value=0.022 Score=50.35 Aligned_cols=44 Identities=23% Similarity=0.441 Sum_probs=37.8
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCCCCCChh
Q 021765 164 EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPF 207 (308)
Q Consensus 164 ~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~~g~~~~ 207 (308)
++..++|||+||.+++.+...+|+.+.+.++++|..-..+...+
T Consensus 137 ~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~n~~~l 180 (264)
T COG2819 137 ERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWHNEAIL 180 (264)
T ss_pred ccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhCCHHHh
Confidence 46899999999999999999999999999999998765554443
No 190
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=95.33 E-value=1.6 Score=38.02 Aligned_cols=111 Identities=15% Similarity=0.109 Sum_probs=66.6
Q ss_pred EEEEeCCCCCC-hhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCC--CcEEEEEeCh
Q 021765 97 KFVLIHGEGFG-AWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLED--EKVILVGHSS 173 (308)
Q Consensus 97 ~vvllHG~~~~-~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~--~~v~lvGhS~ 173 (308)
|+|++=||.+. .....+..+...+.|++++.+-.+....... ...+...++.+.+.+...... .++++-.+|.
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~----~~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSn 76 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWP----SKRLAPAADKLLELLSDSQSASPPPILFHSFSN 76 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeee----ccchHHHHHHHHHHhhhhccCCCCCEEEEEEEC
Confidence 35556666544 4456677777777899999987653222111 135556666666666554433 2799999999
Q ss_pred hHHHHHHHHH----hC------CccccEEEEEccccCCCCCChhhhhH
Q 021765 174 GGACVSYALE----HF------PQKISKAIFLCATMVSDGQRPFDVFA 211 (308)
Q Consensus 174 GG~~a~~~a~----~~------p~~v~~lVli~~~~~~~g~~~~~~~~ 211 (308)
||........ .. -.+++++|+-+++...........+.
T Consensus 77 GG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~ 124 (240)
T PF05705_consen 77 GGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFS 124 (240)
T ss_pred chHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHH
Confidence 8886554433 11 11388999887776544434444443
No 191
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=95.15 E-value=0.094 Score=54.93 Aligned_cols=99 Identities=11% Similarity=0.102 Sum_probs=71.4
Q ss_pred cCCCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEE
Q 021765 91 ENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVG 170 (308)
Q Consensus 91 ~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvG 170 (308)
...+.|+++|+|..-+....+..++..|. .|.+|.-.....+..++++.++-...-++++....+..++|
T Consensus 2119 ~~se~~~~Ffv~pIEG~tt~l~~la~rle----------~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~G 2188 (2376)
T KOG1202|consen 2119 VQSEEPPLFFVHPIEGFTTALESLASRLE----------IPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAG 2188 (2376)
T ss_pred hcccCCceEEEeccccchHHHHHHHhhcC----------CcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeec
Confidence 34567999999999888877777766552 34444432223345688888887777788887767999999
Q ss_pred eChhHHHHHHHHHhCC--ccccEEEEEcccc
Q 021765 171 HSSGGACVSYALEHFP--QKISKAIFLCATM 199 (308)
Q Consensus 171 hS~GG~~a~~~a~~~p--~~v~~lVli~~~~ 199 (308)
+|+|+.++..++.... +....+|++++.+
T Consensus 2189 YSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2189 YSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred cchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 9999999988775432 2355688888764
No 192
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=95.13 E-value=0.32 Score=45.73 Aligned_cols=37 Identities=19% Similarity=0.175 Sum_probs=32.7
Q ss_pred cEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCC
Q 021765 165 KVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (308)
Q Consensus 165 ~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~ 201 (308)
+++++|+|.||+++...+.-.|..++++|=-++...+
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p 221 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALP 221 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCccccc
Confidence 8999999999999999999999999988877776543
No 193
>PLN00413 triacylglycerol lipase
Probab=95.13 E-value=0.073 Score=50.91 Aligned_cols=51 Identities=20% Similarity=0.223 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHh--------CCccccEEEEEcccc
Q 021765 148 EYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEH--------FPQKISKAIFLCATM 199 (308)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~--------~p~~v~~lVli~~~~ 199 (308)
+..+.+.++++..... ++++.|||+||.+|..++.. ...++.+++..+++-
T Consensus 269 ~i~~~Lk~ll~~~p~~-kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PR 327 (479)
T PLN00413 269 TILRHLKEIFDQNPTS-KFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPR 327 (479)
T ss_pred HHHHHHHHHHHHCCCC-eEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCC
Confidence 3455666666665544 89999999999999887742 122455666666643
No 194
>PLN02162 triacylglycerol lipase
Probab=95.11 E-value=0.072 Score=50.82 Aligned_cols=49 Identities=27% Similarity=0.206 Sum_probs=30.7
Q ss_pred HHHHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHh---C-----CccccEEEEEcccc
Q 021765 150 SKPLLDYLENLLEDEKVILVGHSSGGACVSYALEH---F-----PQKISKAIFLCATM 199 (308)
Q Consensus 150 ~~~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~---~-----p~~v~~lVli~~~~ 199 (308)
.+.+.+.+.+... .++++.|||+||.+|..++.. + .+++.+++..+.+-
T Consensus 265 ~~~L~~lL~k~p~-~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPR 321 (475)
T PLN02162 265 RQMLRDKLARNKN-LKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPR 321 (475)
T ss_pred HHHHHHHHHhCCC-ceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCC
Confidence 3444455555443 489999999999999876542 1 12345566666553
No 195
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=95.09 E-value=0.043 Score=49.29 Aligned_cols=38 Identities=21% Similarity=0.322 Sum_probs=33.8
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCC
Q 021765 164 EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (308)
Q Consensus 164 ~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~ 201 (308)
..-+|.|-|+||.++++++..+|+.+..++..++..-.
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~ 214 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWW 214 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceeeccCCcccc
Confidence 36799999999999999999999999999988887643
No 196
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=94.83 E-value=0.093 Score=44.01 Aligned_cols=80 Identities=19% Similarity=0.223 Sum_probs=44.4
Q ss_pred CeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHc---CCCCcEEEEEeChhHHHHHHHHHh------CCccccEEE
Q 021765 123 LIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL---LEDEKVILVGHSSGGACVSYALEH------FPQKISKAI 193 (308)
Q Consensus 123 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~v~lvGhS~GG~~a~~~a~~------~p~~v~~lV 193 (308)
..+..++||-..... ....+...=+..+...++.. ..+.+++|+|+|.|+.++..++.. ..++|.++|
T Consensus 40 ~~~~~V~YpA~~~~~---~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avv 116 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN---SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVV 116 (179)
T ss_dssp EEEEE--S---SCGG---SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEE
T ss_pred eEEEecCCCCCCCcc---cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEE
Confidence 456667777433210 01112333334444444332 233599999999999999988876 235799999
Q ss_pred EEccccCCCCCC
Q 021765 194 FLCATMVSDGQR 205 (308)
Q Consensus 194 li~~~~~~~g~~ 205 (308)
+++-+....+..
T Consensus 117 lfGdP~~~~~~~ 128 (179)
T PF01083_consen 117 LFGDPRRGAGQP 128 (179)
T ss_dssp EES-TTTBTTTT
T ss_pred EecCCcccCCcc
Confidence 998876554433
No 197
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=94.71 E-value=0.052 Score=53.28 Aligned_cols=127 Identities=15% Similarity=0.111 Sum_probs=82.5
Q ss_pred ceEEEeeccCCeeeEEE---e----cCCCceEEEEeCCCCCCh-h-HHHHHHHHHHHCCCeEEEeCCCCCCCCC---CC-
Q 021765 73 RRTLSESLSNGKQDTNI---L----ENIQYKKFVLIHGEGFGA-W-CWYKTVASLEEVGLIPTALDLKGSGIDL---SD- 139 (308)
Q Consensus 73 ~~~~~~~~~~~~~~~~~---~----~~~~~~~vvllHG~~~~~-~-~~~~~~~~L~~~G~~vi~~D~~G~G~S~---~~- 139 (308)
..++..+..+|..+... . ..++.|.+|..+|..+-. . .|..--..|.+.|+.....|.||=|.-. ..
T Consensus 441 ~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~ 520 (712)
T KOG2237|consen 441 VERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKD 520 (712)
T ss_pred EEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhc
Confidence 34555666777766522 1 234567777777654322 1 3443333455688888888999865432 11
Q ss_pred ---CCCcCCHHHHHHHHHHHHHHcC-CCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 140 ---TNSVTTLAEYSKPLLDYLENLL-EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 140 ---~~~~~~~~~~~~~l~~~l~~l~-~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
.....++.|+..-..-+++.-- ...+..+.|.|.||.++..++.++|+.+.++|+--|++
T Consensus 521 G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpfm 584 (712)
T KOG2237|consen 521 GRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFM 584 (712)
T ss_pred cchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcce
Confidence 1134467777766666665432 23589999999999999999999999999888766664
No 198
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=94.64 E-value=0.034 Score=51.78 Aligned_cols=90 Identities=19% Similarity=0.289 Sum_probs=50.3
Q ss_pred CCCceEEEEeCCCCC-ChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCC-CCCcCC-HHHHHHHHHHHHHHcCCCCcEEE
Q 021765 92 NIQYKKFVLIHGEGF-GAWCWYKTVASLEEVGLIPTALDLKGSGIDLSD-TNSVTT-LAEYSKPLLDYLENLLEDEKVIL 168 (308)
Q Consensus 92 ~~~~~~vvllHG~~~-~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~-~~~~~~-~~~~~~~l~~~l~~l~~~~~v~l 168 (308)
.+.+..||+.||+.+ ....|...+...... +.=..+..+|+-..... ...... -...++.+.+.+...... ++.+
T Consensus 77 ~k~~HLvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~-kISf 154 (405)
T KOG4372|consen 77 TKPKHLVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIE-KISF 154 (405)
T ss_pred cCCceEEEeccccccccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccc-eeee
Confidence 345568999999988 567787766666554 22112223332211111 111111 112233344444444455 9999
Q ss_pred EEeChhHHHHHHHHH
Q 021765 169 VGHSSGGACVSYALE 183 (308)
Q Consensus 169 vGhS~GG~~a~~~a~ 183 (308)
+|||+||.++.++..
T Consensus 155 vghSLGGLvar~AIg 169 (405)
T KOG4372|consen 155 VGHSLGGLVARYAIG 169 (405)
T ss_pred eeeecCCeeeeEEEE
Confidence 999999998876654
No 199
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=94.26 E-value=0.11 Score=48.63 Aligned_cols=129 Identities=15% Similarity=0.171 Sum_probs=89.3
Q ss_pred eeEEEecCCCceEEEEeCCCCCChhHHH-HHHHHHHHCCCeEEEeCCCCCCCCCCCCC--CcCCHHHHHHHHHHHHHHcC
Q 021765 85 QDTNILENIQYKKFVLIHGEGFGAWCWY-KTVASLEEVGLIPTALDLKGSGIDLSDTN--SVTTLAEYSKPLLDYLENLL 161 (308)
Q Consensus 85 ~~~~~~~~~~~~~vvllHG~~~~~~~~~-~~~~~L~~~G~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~~l~~~l~~l~ 161 (308)
.+.+...+-+.|+|+..-|++.+..... .... |.+ -+-+.+++|-++.|...+. ...++.+.+.|...+++.+.
T Consensus 53 RvtLlHk~~drPtV~~T~GY~~~~~p~r~Ept~-Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K 129 (448)
T PF05576_consen 53 RVTLLHKDFDRPTVLYTEGYNVSTSPRRSEPTQ-LLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFK 129 (448)
T ss_pred EEEEEEcCCCCCeEEEecCcccccCccccchhH-hhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHH
Confidence 3445556777899999999987654333 3333 333 4678899999999875443 34577777777776666553
Q ss_pred C--CCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccC--CCCCChhhhhHhhhcc
Q 021765 162 E--DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV--SDGQRPFDVFAEELGS 216 (308)
Q Consensus 162 ~--~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~--~~g~~~~~~~~~~~~~ 216 (308)
. .++.+--|-|-||+.++++=.-||+.|++.|.--++.. ....+..+.|.+.++.
T Consensus 130 ~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~~~~~eD~~y~~Fl~~VGt 188 (448)
T PF05576_consen 130 PIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPNDVVNREDSRYDRFLEKVGT 188 (448)
T ss_pred hhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecccccCcccchhHHHHHHhcCC
Confidence 2 24899999999999999999999999999886554432 2344555566665554
No 200
>PLN02454 triacylglycerol lipase
Probab=94.24 E-value=0.14 Score=48.25 Aligned_cols=34 Identities=24% Similarity=0.391 Sum_probs=22.8
Q ss_pred HHHHHHHHHcCCC-CcEEEEEeChhHHHHHHHHHh
Q 021765 151 KPLLDYLENLLED-EKVILVGHSSGGACVSYALEH 184 (308)
Q Consensus 151 ~~l~~~l~~l~~~-~~v~lvGhS~GG~~a~~~a~~ 184 (308)
..|..+++..... -.|++.|||+||.+|..+|..
T Consensus 214 ~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 214 AKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3344444443332 149999999999999888753
No 201
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=94.21 E-value=0.13 Score=50.62 Aligned_cols=108 Identities=21% Similarity=0.199 Sum_probs=61.2
Q ss_pred ceEEEEeCCCCCChh---HH--HHHHHHHHHCCCeEEEeCCC----CCCCCCCC-CCCcCCHHHHHH---HHHHHHHHcC
Q 021765 95 YKKFVLIHGEGFGAW---CW--YKTVASLEEVGLIPTALDLK----GSGIDLSD-TNSVTTLAEYSK---PLLDYLENLL 161 (308)
Q Consensus 95 ~~~vvllHG~~~~~~---~~--~~~~~~L~~~G~~vi~~D~~----G~G~S~~~-~~~~~~~~~~~~---~l~~~l~~l~ 161 (308)
-|++|++||.+.... .+ ......+..+..-|+++.+| |+...... ......+.|.+. .+.+-+...+
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 589999999864322 22 22222334445667778876 32221111 112334444443 4445555554
Q ss_pred -CCCcEEEEEeChhHHHHHHHHHh--CCccccEEEEEccccCCC
Q 021765 162 -EDEKVILVGHSSGGACVSYALEH--FPQKISKAIFLCATMVSD 202 (308)
Q Consensus 162 -~~~~v~lvGhS~GG~~a~~~a~~--~p~~v~~lVli~~~~~~~ 202 (308)
..++|.|+|||.||..+..++.. ....+.++|..++....+
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~~~ 235 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNALSP 235 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccccc
Confidence 33689999999999988666542 124566777777665444
No 202
>PLN02310 triacylglycerol lipase
Probab=94.10 E-value=0.16 Score=47.79 Aligned_cols=52 Identities=19% Similarity=0.227 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHcC---CCCcEEEEEeChhHHHHHHHHHh----CCccccEEEEEcccc
Q 021765 148 EYSKPLLDYLENLL---EDEKVILVGHSSGGACVSYALEH----FPQKISKAIFLCATM 199 (308)
Q Consensus 148 ~~~~~l~~~l~~l~---~~~~v~lvGhS~GG~~a~~~a~~----~p~~v~~lVli~~~~ 199 (308)
+..+.|..+++... ...+|++.|||+||.+|..++.. .+...-.++..+++-
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPR 248 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPR 248 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCC
Confidence 34455566665542 22379999999999999877743 232222355555543
No 203
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=93.94 E-value=0.17 Score=46.83 Aligned_cols=39 Identities=31% Similarity=0.567 Sum_probs=31.1
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCcc-----ccEEEEEccccCCC
Q 021765 164 EKVILVGHSSGGACVSYALEHFPQK-----ISKAIFLCATMVSD 202 (308)
Q Consensus 164 ~~v~lvGhS~GG~~a~~~a~~~p~~-----v~~lVli~~~~~~~ 202 (308)
.+|.|||||+|+-+..+.+....++ |..+++++++.+.+
T Consensus 220 RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 220 RPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 4899999999999888776654443 89999998877654
No 204
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=93.53 E-value=0.32 Score=46.72 Aligned_cols=110 Identities=12% Similarity=0.098 Sum_probs=66.5
Q ss_pred CceEEEEeCCCCCChhHHHHHHHH----HHHC--------------CCeEEEeC-CCCCCCCCCC-CCCcCCHHHHHHHH
Q 021765 94 QYKKFVLIHGEGFGAWCWYKTVAS----LEEV--------------GLIPTALD-LKGSGIDLSD-TNSVTTLAEYSKPL 153 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~----L~~~--------------G~~vi~~D-~~G~G~S~~~-~~~~~~~~~~~~~l 153 (308)
+.|.|+.+.|..+.+..|-.+.+. +... .-.++-+| .-|.|.|... .....+.....+|+
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~ 179 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDV 179 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchhH
Confidence 367899999999998887655331 1100 12478888 4488888641 11122233333333
Q ss_pred HHHHH-------Hc-CCCCcEEEEEeChhHHHHHHHHHhCCc---cccEEEEEccccCCCC
Q 021765 154 LDYLE-------NL-LEDEKVILVGHSSGGACVSYALEHFPQ---KISKAIFLCATMVSDG 203 (308)
Q Consensus 154 ~~~l~-------~l-~~~~~v~lvGhS~GG~~a~~~a~~~p~---~v~~lVli~~~~~~~g 203 (308)
..+++ +. ....+.+|+|.|+||.-+..+|...-+ ..+++|++.+.....|
T Consensus 180 ~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng 240 (498)
T COG2939 180 YSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNG 240 (498)
T ss_pred HHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCC
Confidence 32222 22 222489999999999977666654333 4678888888877766
No 205
>PLN02571 triacylglycerol lipase
Probab=93.50 E-value=0.13 Score=48.66 Aligned_cols=38 Identities=16% Similarity=0.239 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHcCCC-CcEEEEEeChhHHHHHHHHHh
Q 021765 147 AEYSKPLLDYLENLLED-EKVILVGHSSGGACVSYALEH 184 (308)
Q Consensus 147 ~~~~~~l~~~l~~l~~~-~~v~lvGhS~GG~~a~~~a~~ 184 (308)
++...+|..+++..... -+|++.|||+||.+|..+|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 34456666666655432 268999999999999887754
No 206
>PLN02209 serine carboxypeptidase
Probab=93.50 E-value=1.1 Score=43.17 Aligned_cols=107 Identities=18% Similarity=0.126 Sum_probs=62.8
Q ss_pred CceEEEEeCCCCCChhHHHHHHH----------------HHHHC------CCeEEEeCCC-CCCCCCCCCC-CcCCHHHH
Q 021765 94 QYKKFVLIHGEGFGAWCWYKTVA----------------SLEEV------GLIPTALDLK-GSGIDLSDTN-SVTTLAEY 149 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~----------------~L~~~------G~~vi~~D~~-G~G~S~~~~~-~~~~~~~~ 149 (308)
+.|.|+.+.|..+.+..+..+.+ .|..+ -.+++-+|.| |.|.|..... ...+-++.
T Consensus 67 ~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~ 146 (437)
T PLN02209 67 EDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERTSDTSE 146 (437)
T ss_pred CCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCHHH
Confidence 46899999999887775533221 11111 2468889954 8888853322 11222334
Q ss_pred HHHHHHHHHH----cCC--CCcEEEEEeChhHHHHHHHHHh----C------CccccEEEEEccccC
Q 021765 150 SKPLLDYLEN----LLE--DEKVILVGHSSGGACVSYALEH----F------PQKISKAIFLCATMV 200 (308)
Q Consensus 150 ~~~l~~~l~~----l~~--~~~v~lvGhS~GG~~a~~~a~~----~------p~~v~~lVli~~~~~ 200 (308)
++++.++++. ... ..++.|.|.|+||..+..+|.. . +-.++++++.++...
T Consensus 147 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td 213 (437)
T PLN02209 147 VKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITH 213 (437)
T ss_pred HHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccC
Confidence 4555555544 321 2489999999999955555432 1 124678887777543
No 207
>PLN02934 triacylglycerol lipase
Probab=93.48 E-value=0.19 Score=48.53 Aligned_cols=35 Identities=26% Similarity=0.308 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHcCCCCcEEEEEeChhHHHHHHHHH
Q 021765 148 EYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALE 183 (308)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~ 183 (308)
+....+.++++.... .++++.|||+||.+|..++.
T Consensus 306 ~v~~~lk~ll~~~p~-~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKN-AKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCC-CeEEEeccccHHHHHHHHHH
Confidence 344555666665544 38999999999999987764
No 208
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=93.15 E-value=0.22 Score=43.96 Aligned_cols=93 Identities=27% Similarity=0.144 Sum_probs=52.5
Q ss_pred CceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCC----C-----cCCHHHH---HHHHH--HHHHH
Q 021765 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN----S-----VTTLAEY---SKPLL--DYLEN 159 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~----~-----~~~~~~~---~~~l~--~~l~~ 159 (308)
.-|.+++.||++.....-......+...++.++..+...+|.+..... . ......+ ...+. .....
T Consensus 48 ~~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (299)
T COG1073 48 KLPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLL 127 (299)
T ss_pred cCceEEeccCccccccCcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHHHH
Confidence 457899999999988765556677777788877776522222211100 0 0000000 00000 00000
Q ss_pred cCCCCcEEEEEeChhHHHHHHHHHhCC
Q 021765 160 LLEDEKVILVGHSSGGACVSYALEHFP 186 (308)
Q Consensus 160 l~~~~~v~lvGhS~GG~~a~~~a~~~p 186 (308)
.....+....|+++|+..+..++...+
T Consensus 128 ~~~~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 128 GASLGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred hhhcCcceEEEEEeeccchHHHhhcch
Confidence 111138899999999998888887765
No 209
>PLN02408 phospholipase A1
Probab=92.92 E-value=0.26 Score=45.87 Aligned_cols=35 Identities=17% Similarity=0.288 Sum_probs=24.8
Q ss_pred HHHHHHHHHHcCCC-CcEEEEEeChhHHHHHHHHHh
Q 021765 150 SKPLLDYLENLLED-EKVILVGHSSGGACVSYALEH 184 (308)
Q Consensus 150 ~~~l~~~l~~l~~~-~~v~lvGhS~GG~~a~~~a~~ 184 (308)
.++|..+++..... ..|++.|||+||.+|..+|..
T Consensus 185 l~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 185 REEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 45555666655432 259999999999999877754
No 210
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=92.66 E-value=1.2 Score=42.65 Aligned_cols=106 Identities=17% Similarity=0.106 Sum_probs=61.0
Q ss_pred CceEEEEeCCCCCChhHHHHHHH----------------HHHHC------CCeEEEeCCC-CCCCCCCCCCCc--CCH--
Q 021765 94 QYKKFVLIHGEGFGAWCWYKTVA----------------SLEEV------GLIPTALDLK-GSGIDLSDTNSV--TTL-- 146 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~----------------~L~~~------G~~vi~~D~~-G~G~S~~~~~~~--~~~-- 146 (308)
+.|.|+.+.|..+.+..+..+.+ .|..+ -.+++-+|.| |.|.|....... .+.
T Consensus 65 ~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~d~~~ 144 (433)
T PLN03016 65 EDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKTGDISE 144 (433)
T ss_pred cCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCHHH
Confidence 46899999999887764322111 11111 2568889954 899886432211 111
Q ss_pred -HHHHHHHHHHHHHcCC--CCcEEEEEeChhHHHHHHHHHh----C------CccccEEEEEcccc
Q 021765 147 -AEYSKPLLDYLENLLE--DEKVILVGHSSGGACVSYALEH----F------PQKISKAIFLCATM 199 (308)
Q Consensus 147 -~~~~~~l~~~l~~l~~--~~~v~lvGhS~GG~~a~~~a~~----~------p~~v~~lVli~~~~ 199 (308)
++....+..+++.... ..++.|.|.|+||..+..+|.. . +-.++++++-++..
T Consensus 145 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t 210 (433)
T PLN03016 145 VKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVT 210 (433)
T ss_pred HHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCc
Confidence 2333334444443321 2489999999999966555442 1 12567888777654
No 211
>PLN03037 lipase class 3 family protein; Provisional
Probab=92.23 E-value=0.25 Score=47.76 Aligned_cols=36 Identities=19% Similarity=0.260 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHcC---CCCcEEEEEeChhHHHHHHHHH
Q 021765 148 EYSKPLLDYLENLL---EDEKVILVGHSSGGACVSYALE 183 (308)
Q Consensus 148 ~~~~~l~~~l~~l~---~~~~v~lvGhS~GG~~a~~~a~ 183 (308)
+..++|..+++... .+..++|.|||+||.+|...|.
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~ 337 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAY 337 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHH
Confidence 34456666665553 2236999999999999987774
No 212
>PLN02324 triacylglycerol lipase
Probab=92.19 E-value=0.23 Score=46.88 Aligned_cols=34 Identities=21% Similarity=0.248 Sum_probs=24.3
Q ss_pred HHHHHHHHHHcCCC-CcEEEEEeChhHHHHHHHHH
Q 021765 150 SKPLLDYLENLLED-EKVILVGHSSGGACVSYALE 183 (308)
Q Consensus 150 ~~~l~~~l~~l~~~-~~v~lvGhS~GG~~a~~~a~ 183 (308)
...|..+++..... ..|++.|||+||.+|..+|.
T Consensus 200 l~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 200 QGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 44555666654432 26999999999999988775
No 213
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=91.88 E-value=1.4 Score=38.43 Aligned_cols=82 Identities=17% Similarity=0.151 Sum_probs=49.8
Q ss_pred CCeEEEeCCCCC-CCC--CCCCCCcCCHHHHHHHHHHHHHHc-CCCCcEEEEEeChhHHHHHHHHHhCCc------cccE
Q 021765 122 GLIPTALDLKGS-GID--LSDTNSVTTLAEYSKPLLDYLENL-LEDEKVILVGHSSGGACVSYALEHFPQ------KISK 191 (308)
Q Consensus 122 G~~vi~~D~~G~-G~S--~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~v~lvGhS~GG~~a~~~a~~~p~------~v~~ 191 (308)
|+.+..+++|.. +-- ........+..+=++.+.+.++.. ..+++++++|+|+|+.++..++.+.-+ ..-.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 677888888861 110 011112335556566666666652 244589999999999999887765421 2335
Q ss_pred EEEEccccCCCC
Q 021765 192 AIFLCATMVSDG 203 (308)
Q Consensus 192 lVli~~~~~~~g 203 (308)
+|+++-+..++|
T Consensus 82 fVl~gnP~rp~G 93 (225)
T PF08237_consen 82 FVLIGNPRRPNG 93 (225)
T ss_pred EEEecCCCCCCC
Confidence 677766655544
No 214
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=91.52 E-value=0.33 Score=47.60 Aligned_cols=98 Identities=10% Similarity=0.045 Sum_probs=57.3
Q ss_pred ceEEEEeCCCC--CChhHHH-HHHHHHHHCC--CeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHc-------CC
Q 021765 95 YKKFVLIHGEG--FGAWCWY-KTVASLEEVG--LIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL-------LE 162 (308)
Q Consensus 95 ~~~vvllHG~~--~~~~~~~-~~~~~L~~~G--~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l-------~~ 162 (308)
.|.+|++||.. ....+|+ .+-..|.-.| ..|-+||++.- ....++...++.+..+.+.. ..
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~-------igG~nI~h~ae~~vSf~r~kvlei~gefp 248 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNP-------IGGANIKHAAEYSVSFDRYKVLEITGEFP 248 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCC-------CCCcchHHHHHHHHHHhhhhhhhhhccCC
Confidence 47889999987 1222232 2222333222 45677787621 11135666666655555422 11
Q ss_pred CCcEEEEEeChhHHHHHHHHHh-CCccccEEEEEcccc
Q 021765 163 DEKVILVGHSSGGACVSYALEH-FPQKISKAIFLCATM 199 (308)
Q Consensus 163 ~~~v~lvGhS~GG~~a~~~a~~-~p~~v~~lVli~~~~ 199 (308)
..+|+|+|+|||+.++...... ....|+++|.++-+.
T Consensus 249 ha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl 286 (784)
T KOG3253|consen 249 HAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPL 286 (784)
T ss_pred CCceEEEecccCceeeEEeccccCCceEEEEEEecccc
Confidence 2489999999998877766543 223488888886554
No 215
>PLN02802 triacylglycerol lipase
Probab=91.51 E-value=0.32 Score=47.02 Aligned_cols=35 Identities=17% Similarity=0.249 Sum_probs=24.3
Q ss_pred HHHHHHHHHHcCC-CCcEEEEEeChhHHHHHHHHHh
Q 021765 150 SKPLLDYLENLLE-DEKVILVGHSSGGACVSYALEH 184 (308)
Q Consensus 150 ~~~l~~~l~~l~~-~~~v~lvGhS~GG~~a~~~a~~ 184 (308)
.++|..+++.... ...|++.|||+||.+|..++..
T Consensus 315 l~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 315 VGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 4455556655432 2368999999999999877654
No 216
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=91.39 E-value=1.1 Score=43.99 Aligned_cols=199 Identities=15% Similarity=0.127 Sum_probs=108.6
Q ss_pred eeccCCeeeEEEecC----C-CceEEEEeCCCCCChh--HHHHHHHHHHHCCCeEEEeCCCCCCCCCC-------CCCCc
Q 021765 78 ESLSNGKQDTNILEN----I-QYKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDLS-------DTNSV 143 (308)
Q Consensus 78 ~~~~~~~~~~~~~~~----~-~~~~vvllHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~-------~~~~~ 143 (308)
....+|.++.|++-. . +.|++|+--|...-+. .|........++|...+..+.||=|.-.. ..+..
T Consensus 399 atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq 478 (648)
T COG1505 399 ATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQ 478 (648)
T ss_pred EEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcch
Confidence 445578888766531 1 3566655544332222 35555566667798888999999665321 11233
Q ss_pred CCHHHHHHHHHHHHHHc-CCCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEccccCCCCCChhhhhHhh-hcchHHHH
Q 021765 144 TTLAEYSKPLLDYLENL-LEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEE-LGSAERFM 221 (308)
Q Consensus 144 ~~~~~~~~~l~~~l~~l-~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~~~~g~~~~~~~~~~-~~~~~~~~ 221 (308)
..++|+.....+++++- ...+++.+-|-|-||.+...++.++|+.+.++|.--|. +|++--. +.....|+
T Consensus 479 ~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPl--------lDMlRYh~l~aG~sW~ 550 (648)
T COG1505 479 NVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPL--------LDMLRYHLLTAGSSWI 550 (648)
T ss_pred hhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccch--------hhhhhhcccccchhhH
Confidence 35666666555555442 12358999999999999988888999988777654333 2222111 11111233
Q ss_pred HHHHHHHhcCCCCCCCcccccCHHHHHHHhcCCCchhhhhcccCCCCCccchhhhcccccccchhhchHHHHHhhhhhee
Q 021765 222 QESQFLIYGNGKDKPPTGFMFEKQQMKGLYFNQSPSKVWYSSSLSFPIKQFLWFYQFAESLTSAYVSWKHFWDAIFLGFV 301 (308)
Q Consensus 222 ~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~p~~~~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~ 301 (308)
. -|++.. +++..+ .+..-+|-...... . ...|+|+-.+..|.-|.+..+.+=+..+.=.+-|
T Consensus 551 ~-----EYG~Pd---------~P~d~~-~l~~YSPy~nl~~g-~--kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~p 612 (648)
T COG1505 551 A-----EYGNPD---------DPEDRA-FLLAYSPYHNLKPG-Q--KYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAP 612 (648)
T ss_pred h-----hcCCCC---------CHHHHH-HHHhcCchhcCCcc-c--cCCCeEEEcccccccccchHHHHHHHHHHhcCCc
Confidence 3 233221 111111 22222222222111 1 2234788888888888777777766666555533
Q ss_pred e
Q 021765 302 T 302 (308)
Q Consensus 302 ~ 302 (308)
+
T Consensus 613 v 613 (648)
T COG1505 613 V 613 (648)
T ss_pred e
Confidence 3
No 217
>PLN02753 triacylglycerol lipase
Probab=91.25 E-value=0.33 Score=47.11 Aligned_cols=35 Identities=23% Similarity=0.264 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHcCC----CCcEEEEEeChhHHHHHHHHH
Q 021765 149 YSKPLLDYLENLLE----DEKVILVGHSSGGACVSYALE 183 (308)
Q Consensus 149 ~~~~l~~~l~~l~~----~~~v~lvGhS~GG~~a~~~a~ 183 (308)
....|..+++.... +.+|++.|||+||.+|..+|.
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 34455566655432 248999999999999988774
No 218
>PLN02761 lipase class 3 family protein
Probab=90.59 E-value=0.41 Score=46.39 Aligned_cols=36 Identities=14% Similarity=0.140 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHcC-----CCCcEEEEEeChhHHHHHHHHH
Q 021765 148 EYSKPLLDYLENLL-----EDEKVILVGHSSGGACVSYALE 183 (308)
Q Consensus 148 ~~~~~l~~~l~~l~-----~~~~v~lvGhS~GG~~a~~~a~ 183 (308)
+....|..+++... .+.+|++.|||+||.+|..+|.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 33455556665542 1236999999999999987774
No 219
>PLN02847 triacylglycerol lipase
Probab=90.19 E-value=0.51 Score=46.46 Aligned_cols=21 Identities=33% Similarity=0.417 Sum_probs=17.6
Q ss_pred CcEEEEEeChhHHHHHHHHHh
Q 021765 164 EKVILVGHSSGGACVSYALEH 184 (308)
Q Consensus 164 ~~v~lvGhS~GG~~a~~~a~~ 184 (308)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 389999999999998776653
No 220
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=89.92 E-value=1.1 Score=37.19 Aligned_cols=35 Identities=23% Similarity=0.279 Sum_probs=32.2
Q ss_pred cEEEEEeChhHHHHHHHHHhCCccccEEEEEcccc
Q 021765 165 KVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 165 ~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
..++-|-||||..+..+.-++|+...++|.+++..
T Consensus 102 s~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 102 STIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred CccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 67888999999999999999999999999998865
No 221
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=89.86 E-value=2.2 Score=41.00 Aligned_cols=101 Identities=16% Similarity=0.053 Sum_probs=63.9
Q ss_pred cCCeeeEEEecCC--CceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEe-CCCCCCCCCCCCCCcCCHHH-HHHHHHHH
Q 021765 81 SNGKQDTNILENI--QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTAL-DLKGSGIDLSDTNSVTTLAE-YSKPLLDY 156 (308)
Q Consensus 81 ~~~~~~~~~~~~~--~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~-D~~G~G~S~~~~~~~~~~~~-~~~~l~~~ 156 (308)
..+..+.+|..++ .+|..|++-|+-. ++-|+.+. .+...|...+.+ |.|=-|.+-.... ..+++ ..+.|.+.
T Consensus 273 ~~reEi~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~-MMk~Lg~PfLL~~DpRleGGaFYlGs--~eyE~~I~~~I~~~ 348 (511)
T TIGR03712 273 SKRQEFIYYFNPGDFKPPLNVYFSGYRP-AEGFEGYF-MMKRLGAPFLLIGDPRLEGGAFYLGS--DEYEQGIINVIQEK 348 (511)
T ss_pred CCCCeeEEecCCcCCCCCeEEeeccCcc-cCcchhHH-HHHhcCCCeEEeeccccccceeeeCc--HHHHHHHHHHHHHH
Confidence 3456666776544 4677899999865 44444322 223335555544 6665565432211 13333 45566678
Q ss_pred HHHcCCC-CcEEEEEeChhHHHHHHHHHhC
Q 021765 157 LENLLED-EKVILVGHSSGGACVSYALEHF 185 (308)
Q Consensus 157 l~~l~~~-~~v~lvGhS~GG~~a~~~a~~~ 185 (308)
|+.|+.. +.++|-|-|||..-|+++++..
T Consensus 349 L~~LgF~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 349 LDYLGFDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred HHHhCCCHHHeeeccccccchhhhhhcccC
Confidence 8888754 4799999999999999998764
No 222
>PLN02719 triacylglycerol lipase
Probab=89.69 E-value=0.52 Score=45.59 Aligned_cols=35 Identities=20% Similarity=0.261 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHcCC----CCcEEEEEeChhHHHHHHHHH
Q 021765 149 YSKPLLDYLENLLE----DEKVILVGHSSGGACVSYALE 183 (308)
Q Consensus 149 ~~~~l~~~l~~l~~----~~~v~lvGhS~GG~~a~~~a~ 183 (308)
....|..+++.... ...|++.|||+||.+|..+|.
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 34455555555432 237999999999999988764
No 223
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=88.87 E-value=0.91 Score=31.07 Aligned_cols=38 Identities=16% Similarity=0.030 Sum_probs=20.2
Q ss_pred eEEEeeccCCeeeEEEe--cC-------CCceEEEEeCCCCCChhHH
Q 021765 74 RTLSESLSNGKQDTNIL--EN-------IQYKKFVLIHGEGFGAWCW 111 (308)
Q Consensus 74 ~~~~~~~~~~~~~~~~~--~~-------~~~~~vvllHG~~~~~~~~ 111 (308)
++..+...||-.+.++. .. ..+|+|+|.||+.+++..|
T Consensus 13 E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 13 EEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred EEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 44555666776555432 11 2468999999999999888
No 224
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=88.29 E-value=1.8 Score=39.71 Aligned_cols=77 Identities=21% Similarity=0.173 Sum_probs=45.3
Q ss_pred CeEEEeCCC-CCCCCCCCCCCc-CCHHHHHHHHHH----HHHHcCC--CCcEEEEEeChhHHHHHHHHHh----C-----
Q 021765 123 LIPTALDLK-GSGIDLSDTNSV-TTLAEYSKPLLD----YLENLLE--DEKVILVGHSSGGACVSYALEH----F----- 185 (308)
Q Consensus 123 ~~vi~~D~~-G~G~S~~~~~~~-~~~~~~~~~l~~----~l~~l~~--~~~v~lvGhS~GG~~a~~~a~~----~----- 185 (308)
.+++-+|.| |.|.|-...... .+-+..++++.. +++.... ..++.|.|-|+||..+..+|.. .
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 368889988 888885432211 111122344444 4433321 2489999999999966655543 1
Q ss_pred -CccccEEEEEcccc
Q 021765 186 -PQKISKAIFLCATM 199 (308)
Q Consensus 186 -p~~v~~lVli~~~~ 199 (308)
+-.++++++-++..
T Consensus 82 ~~inLkGi~IGNg~t 96 (319)
T PLN02213 82 PPINLQGYMLGNPVT 96 (319)
T ss_pred CceeeeEEEeCCCCC
Confidence 12466777766654
No 225
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=87.43 E-value=0.93 Score=41.99 Aligned_cols=37 Identities=27% Similarity=0.287 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHh
Q 021765 147 AEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEH 184 (308)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~ 184 (308)
..+.+++..+++....- .+.+-|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~-~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNY-SIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCc-EEEEecCChHHHHHHHHHHH
Confidence 45555666666666643 89999999999998877653
No 226
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=87.17 E-value=1.2 Score=34.36 Aligned_cols=34 Identities=18% Similarity=0.135 Sum_probs=19.3
Q ss_pred CCeeeEEEe---cCCCceEEEEeCCCCCChhHHHHHH
Q 021765 82 NGKQDTNIL---ENIQYKKFVLIHGEGFGAWCWYKTV 115 (308)
Q Consensus 82 ~~~~~~~~~---~~~~~~~vvllHG~~~~~~~~~~~~ 115 (308)
+|..++... .+.+..+|||+||+.++-..|.+++
T Consensus 76 ~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~vI 112 (112)
T PF06441_consen 76 DGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKVI 112 (112)
T ss_dssp TTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHHH
T ss_pred eeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhhC
Confidence 466666433 3445679999999999988776653
No 227
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=86.95 E-value=2.6 Score=34.62 Aligned_cols=80 Identities=18% Similarity=0.142 Sum_probs=53.7
Q ss_pred eEEEEeCCCCCChhHHHHHHHHHHHCCCe-EEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChh
Q 021765 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLI-PTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSG 174 (308)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~-vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 174 (308)
..||++-||+..++....++ +.+ ++. ++++|+..... ..++..+ ..+.+|++|||
T Consensus 12 ~LIvyFaGwgtpps~v~HLi--lpe-N~dl~lcYDY~dl~l-------dfDfsAy--------------~hirlvAwSMG 67 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLI--LPE-NHDLLLCYDYQDLNL-------DFDFSAY--------------RHIRLVAWSMG 67 (214)
T ss_pred EEEEEEecCCCCHHHHhhcc--CCC-CCcEEEEeehhhcCc-------ccchhhh--------------hhhhhhhhhHH
Confidence 48899999999888776654 333 454 56788864321 1122211 26789999999
Q ss_pred HHHHHHHHHhCCccccEEEEEccccCC
Q 021765 175 GACVSYALEHFPQKISKAIFLCATMVS 201 (308)
Q Consensus 175 G~~a~~~a~~~p~~v~~lVli~~~~~~ 201 (308)
-.+|-.++...+ ++..+.+.+...+
T Consensus 68 VwvAeR~lqg~~--lksatAiNGTgLp 92 (214)
T COG2830 68 VWVAERVLQGIR--LKSATAINGTGLP 92 (214)
T ss_pred HHHHHHHHhhcc--ccceeeecCCCCC
Confidence 999999988755 6666667665543
No 228
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=86.74 E-value=1.3 Score=39.72 Aligned_cols=35 Identities=31% Similarity=0.465 Sum_probs=25.9
Q ss_pred HHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhCC
Q 021765 152 PLLDYLENLLEDEKVILVGHSSGGACVSYALEHFP 186 (308)
Q Consensus 152 ~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p 186 (308)
+|...+..+..+.++.+-|||+||.+|..+...+.
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 34444444444559999999999999999888764
No 229
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=86.74 E-value=1.3 Score=39.72 Aligned_cols=35 Identities=31% Similarity=0.465 Sum_probs=25.9
Q ss_pred HHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhCC
Q 021765 152 PLLDYLENLLEDEKVILVGHSSGGACVSYALEHFP 186 (308)
Q Consensus 152 ~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p 186 (308)
+|...+..+..+.++.+-|||+||.+|..+...+.
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 34444444444559999999999999999888764
No 230
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=85.81 E-value=9.1 Score=28.77 Aligned_cols=87 Identities=21% Similarity=0.230 Sum_probs=54.4
Q ss_pred ChhH-HHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhHH--HHHHHHH
Q 021765 107 GAWC-WYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGA--CVSYALE 183 (308)
Q Consensus 107 ~~~~-~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG~--~a~~~a~ 183 (308)
+.|. |..+.+.+..+||..=.+.++..|.+..........+.-...+..+++.+... ++++||-|--.= +-..++.
T Consensus 8 SPwnly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~-kfiLIGDsgq~DpeiY~~ia~ 86 (100)
T PF09949_consen 8 SPWNLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPER-KFILIGDSGQHDPEIYAEIAR 86 (100)
T ss_pred CHHHHHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCCC-cEEEEeeCCCcCHHHHHHHHH
Confidence 3443 44566677777787666667666544322111111234456677788777765 999999875443 4456788
Q ss_pred hCCccccEEEE
Q 021765 184 HFPQKISKAIF 194 (308)
Q Consensus 184 ~~p~~v~~lVl 194 (308)
.+|++|.++.+
T Consensus 87 ~~P~~i~ai~I 97 (100)
T PF09949_consen 87 RFPGRILAIYI 97 (100)
T ss_pred HCCCCEEEEEE
Confidence 89999987753
No 231
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=85.39 E-value=6.9 Score=37.75 Aligned_cols=118 Identities=18% Similarity=0.070 Sum_probs=66.1
Q ss_pred cCCeeeEEEe-c----CCCceEEEEeCCCCCChhHHHHHHHHHH-----HC-------------CCeEEEeCCC-CCCCC
Q 021765 81 SNGKQDTNIL-E----NIQYKKFVLIHGEGFGAWCWYKTVASLE-----EV-------------GLIPTALDLK-GSGID 136 (308)
Q Consensus 81 ~~~~~~~~~~-~----~~~~~~vvllHG~~~~~~~~~~~~~~L~-----~~-------------G~~vi~~D~~-G~G~S 136 (308)
..+..+.||. + ....|.||.+.|..+.+..- .+..++- .. --+++-+|-| |.|.|
T Consensus 54 ~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFS 132 (454)
T KOG1282|consen 54 SEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFS 132 (454)
T ss_pred CCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCcc
Confidence 3456666554 2 23468899999988776543 3322221 11 1357888877 78877
Q ss_pred CCCCCC--cCCHHHHHHH----HHHHHHHcCC--CCcEEEEEeChhHHHHHHHHHh----CC------ccccEEEEEccc
Q 021765 137 LSDTNS--VTTLAEYSKP----LLDYLENLLE--DEKVILVGHSSGGACVSYALEH----FP------QKISKAIFLCAT 198 (308)
Q Consensus 137 ~~~~~~--~~~~~~~~~~----l~~~l~~l~~--~~~v~lvGhS~GG~~a~~~a~~----~p------~~v~~lVli~~~ 198 (308)
-..... ..+-+..+++ +..++++... ..++.|.|-|++|..+..+|+. .. -.++++++=.+.
T Consensus 133 Ys~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~ 212 (454)
T KOG1282|consen 133 YSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGL 212 (454)
T ss_pred ccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcc
Confidence 532221 1223333444 4444544432 2489999999999866655542 21 245666655554
Q ss_pred c
Q 021765 199 M 199 (308)
Q Consensus 199 ~ 199 (308)
.
T Consensus 213 t 213 (454)
T KOG1282|consen 213 T 213 (454)
T ss_pred c
Confidence 4
No 232
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=83.68 E-value=6.9 Score=36.55 Aligned_cols=85 Identities=20% Similarity=0.219 Sum_probs=60.0
Q ss_pred eEEEEeCCCCCCh-------hHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEE
Q 021765 96 KKFVLIHGEGFGA-------WCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVIL 168 (308)
Q Consensus 96 ~~vvllHG~~~~~-------~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~l 168 (308)
..||++||-++++ +.|..+++.+.++|+ +-.+|..-.|.. ..+++++..+..++.... -.+
T Consensus 172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~l-ip~~D~AYQGF~-------~GleeDa~~lR~~a~~~~----~~l 239 (396)
T COG1448 172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGL-IPFFDIAYQGFA-------DGLEEDAYALRLFAEVGP----ELL 239 (396)
T ss_pred CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCC-eeeeehhhhhhc-------cchHHHHHHHHHHHHhCC----cEE
Confidence 4799999988764 479999999998864 444565544421 147788888777776532 288
Q ss_pred EEeChhHHHHHHHHHhCCccccEEEEEcc
Q 021765 169 VGHSSGGACVSYALEHFPQKISKAIFLCA 197 (308)
Q Consensus 169 vGhS~GG~~a~~~a~~~p~~v~~lVli~~ 197 (308)
|..|+.-..++ |.+||.++.+++.
T Consensus 240 va~S~SKnfgL-----YgERVGa~~vva~ 263 (396)
T COG1448 240 VASSFSKNFGL-----YGERVGALSVVAE 263 (396)
T ss_pred EEehhhhhhhh-----hhhccceeEEEeC
Confidence 88888765554 5688888888854
No 233
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.26 E-value=2.2 Score=41.94 Aligned_cols=54 Identities=31% Similarity=0.431 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHHHHHcCC--CCcEEEEEeChhHHHHHHHHHh-----CCc------cccEEEEEccc
Q 021765 145 TLAEYSKPLLDYLENLLE--DEKVILVGHSSGGACVSYALEH-----FPQ------KISKAIFLCAT 198 (308)
Q Consensus 145 ~~~~~~~~l~~~l~~l~~--~~~v~lvGhS~GG~~a~~~a~~-----~p~------~v~~lVli~~~ 198 (308)
++......+.+.+++.+. +.+|+.|||||||..+-.++.. .|+ .-.++|+++.+
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 444445555555555433 3689999999999988655432 122 36678888765
No 234
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=80.69 E-value=1.9 Score=38.30 Aligned_cols=108 Identities=13% Similarity=0.122 Sum_probs=63.5
Q ss_pred EEecCCCceEEEEeCCCCCChhHHH-HHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHH--------HHHHH
Q 021765 88 NILENIQYKKFVLIHGEGFGAWCWY-KTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPL--------LDYLE 158 (308)
Q Consensus 88 ~~~~~~~~~~vvllHG~~~~~~~~~-~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l--------~~~l~ 158 (308)
.+.+++-++..+.+-|-+++...-. .+..-+.++|...+.++-|-+|.......-. ..-+.+.|+ .+...
T Consensus 106 ~liPQK~~~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~-~~Le~vtDlf~mG~A~I~E~~~ 184 (371)
T KOG1551|consen 106 WLIPQKMADLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQII-HMLEYVTDLFKMGRATIQEFVK 184 (371)
T ss_pred eecccCcCCeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCHHHHH-HHHHHHHHHHHhhHHHHHHHHH
Confidence 3445555566666666555444322 3455666778888999999888654222111 111112221 22222
Q ss_pred Hc------CCCCcEEEEEeChhHHHHHHHHHhCCccccEEEEEcc
Q 021765 159 NL------LEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCA 197 (308)
Q Consensus 159 ~l------~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVli~~ 197 (308)
.+ +. .+..|+|-||||.+|..+...++..|.-+=++++
T Consensus 185 lf~Ws~~~g~-g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~ 228 (371)
T KOG1551|consen 185 LFTWSSADGL-GNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNS 228 (371)
T ss_pred hcccccccCc-ccceeeeeecccHHHHhhcccCCCCccccccccc
Confidence 22 23 3899999999999999999987776655444433
No 235
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=79.65 E-value=18 Score=30.41 Aligned_cols=77 Identities=14% Similarity=0.013 Sum_probs=44.9
Q ss_pred CCceEEEEeCCCCCChhHH--HHHHHHHHHCCCeEEEeCCC--CCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEE
Q 021765 93 IQYKKFVLIHGEGFGAWCW--YKTVASLEEVGLIPTALDLK--GSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVIL 168 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~--~~~~~~L~~~G~~vi~~D~~--G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~l 168 (308)
+.++.+|++-|+.++...- ..+.+.|.+.|++++.+|-- -||.+..-.-...+-.+.+..+.++.+.+....-++|
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGDnvR~gL~~dLgFs~edR~eniRRvaevAkll~daG~ivi 99 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGDNVRHGLNRDLGFSREDRIENIRRVAEVAKLLADAGLIVI 99 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecChhHhhcccCCCCCChHHHHHHHHHHHHHHHHHHHCCeEEE
Confidence 4567899999998887643 35677889999999999843 2555443221122223333334444444433224455
Q ss_pred E
Q 021765 169 V 169 (308)
Q Consensus 169 v 169 (308)
+
T Consensus 100 v 100 (197)
T COG0529 100 V 100 (197)
T ss_pred E
Confidence 4
No 236
>PRK12467 peptide synthase; Provisional
Probab=78.16 E-value=19 Score=44.47 Aligned_cols=103 Identities=16% Similarity=-0.002 Sum_probs=70.3
Q ss_pred ceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChh
Q 021765 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSG 174 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 174 (308)
.+.+++.|...+....+..+...|.. +..++.+..++.-... ....++...+....+.+.......+..+.|+|+|
T Consensus 3692 ~~~l~~~h~~~r~~~~~~~l~~~l~~-~~~~~~l~~~~~~~d~---~~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g 3767 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDYEPLAVILEG-DRHVLGLTCRHLLDDG---WQDTSLQAMAVQYADYILWQQAKGPYGLLGWSLG 3767 (3956)
T ss_pred ccceeeechhhcchhhhHHHHHHhCC-CCcEEEEecccccccc---CCccchHHHHHHHHHHHHHhccCCCeeeeeeecc
Confidence 35699999998888888888777755 5788888776543211 1233566666666666666554458999999999
Q ss_pred HHHHHHHHHh---CCccccEEEEEccccCC
Q 021765 175 GACVSYALEH---FPQKISKAIFLCATMVS 201 (308)
Q Consensus 175 G~~a~~~a~~---~p~~v~~lVli~~~~~~ 201 (308)
|.++..++.. ..+.+.-+.+++...+.
T Consensus 3768 ~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~ 3797 (3956)
T PRK12467 3768 GTLARLVAELLEREGESEAFLGLFDNTLPL 3797 (3956)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEEeccccc
Confidence 9998777653 34556666666554443
No 237
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=74.95 E-value=4.9 Score=38.99 Aligned_cols=41 Identities=24% Similarity=0.305 Sum_probs=31.3
Q ss_pred CcEEEEEeChhHHHHHHHHHhC-----CccccEEEEEccccCCCCC
Q 021765 164 EKVILVGHSSGGACVSYALEHF-----PQKISKAIFLCATMVSDGQ 204 (308)
Q Consensus 164 ~~v~lvGhS~GG~~a~~~a~~~-----p~~v~~lVli~~~~~~~g~ 204 (308)
.+|.|||+|+|+-+........ -+.|..+|+++++++....
T Consensus 447 RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~ 492 (633)
T KOG2385|consen 447 RPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAK 492 (633)
T ss_pred CceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHH
Confidence 4999999999999887554422 2358899999999877543
No 238
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=74.24 E-value=15 Score=36.32 Aligned_cols=94 Identities=19% Similarity=0.151 Sum_probs=49.1
Q ss_pred ceEEEEeCCCCCChh------HH-HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcC-CHHHHHHHHHHHH---HHcCC-
Q 021765 95 YKKFVLIHGEGFGAW------CW-YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVT-TLAEYSKPLLDYL---ENLLE- 162 (308)
Q Consensus 95 ~~~vvllHG~~~~~~------~~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~-~~~~~~~~l~~~l---~~l~~- 162 (308)
+-.||-+||.|.-+. .| +.|+.. .|..|+.+|+-= .+..+.. .+++..-.-.-++ ..++.
T Consensus 396 ~sli~HcHGGGfVAqsSkSHE~YLr~Wa~a---L~cPiiSVdYSL-----APEaPFPRaleEv~fAYcW~inn~allG~T 467 (880)
T KOG4388|consen 396 RSLIVHCHGGGFVAQSSKSHEPYLRSWAQA---LGCPIISVDYSL-----APEAPFPRALEEVFFAYCWAINNCALLGST 467 (880)
T ss_pred ceEEEEecCCceeeeccccccHHHHHHHHH---hCCCeEEeeecc-----CCCCCCCcHHHHHHHHHHHHhcCHHHhCcc
Confidence 347888999875332 22 234444 479999999842 2222111 2222211111112 23343
Q ss_pred CCcEEEEEeChhHHH----HHHHHHhCCccccEEEEEc
Q 021765 163 DEKVILVGHSSGGAC----VSYALEHFPQKISKAIFLC 196 (308)
Q Consensus 163 ~~~v~lvGhS~GG~~----a~~~a~~~p~~v~~lVli~ 196 (308)
.++|+++|-|.||.+ ++.+.+..-..-+++++.-
T Consensus 468 gEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY 505 (880)
T KOG4388|consen 468 GERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAY 505 (880)
T ss_pred cceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEec
Confidence 369999999999984 4444443222235666543
No 239
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=72.88 E-value=21 Score=33.22 Aligned_cols=106 Identities=20% Similarity=0.158 Sum_probs=66.7
Q ss_pred ceEEEEeCCCCCChhHH-HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCC-CCcEEEEEeC
Q 021765 95 YKKFVLIHGEGFGAWCW-YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE-DEKVILVGHS 172 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~-~~~v~lvGhS 172 (308)
..+||++=||.+..+-| .+......+.||.++-+-.|-+-...........+......+..++..... ..++++--+|
T Consensus 38 ~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~FS 117 (350)
T KOG2521|consen 38 EKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIFHVFS 117 (350)
T ss_pred cccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEEEEec
Confidence 33666666776666654 467777888899999888876554433333444555666677777766652 2478888999
Q ss_pred hhHHHHHHHH----HhC-C---ccccEEEEEccccC
Q 021765 173 SGGACVSYAL----EHF-P---QKISKAIFLCATMV 200 (308)
Q Consensus 173 ~GG~~a~~~a----~~~-p---~~v~~lVli~~~~~ 200 (308)
+||...+... .++ | +.+.++++...+..
T Consensus 118 ~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~ 153 (350)
T KOG2521|consen 118 GNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPAR 153 (350)
T ss_pred CCceeehHHHHHHHhhcCchhHhhcCCceEeccccc
Confidence 9998554332 122 2 23556777666554
No 240
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=69.50 E-value=55 Score=29.79 Aligned_cols=103 Identities=12% Similarity=0.001 Sum_probs=67.6
Q ss_pred eEEEEeCCCCCC-hhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChh
Q 021765 96 KKFVLIHGEGFG-AWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSG 174 (308)
Q Consensus 96 ~~vvllHG~~~~-~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 174 (308)
|.|+++-.+.+. +...+...+.|... ..|+..||-.--.-.- .....+++|+++-+.+++..++.+ +++++-+.=
T Consensus 104 PkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~-~~G~FdldDYIdyvie~~~~~Gp~--~hv~aVCQP 179 (415)
T COG4553 104 PKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPL-EAGHFDLDDYIDYVIEMINFLGPD--AHVMAVCQP 179 (415)
T ss_pred CeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeec-ccCCccHHHHHHHHHHHHHHhCCC--CcEEEEecC
Confidence 456666555544 44566777777763 7899989864322111 124458999999999999999874 666666665
Q ss_pred HH-----HHHHHHHhCCccccEEEEEccccCCC
Q 021765 175 GA-----CVSYALEHFPQKISKAIFLCATMVSD 202 (308)
Q Consensus 175 G~-----~a~~~a~~~p~~v~~lVli~~~~~~~ 202 (308)
+. +++..+...|..-..++++++++...
T Consensus 180 ~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR 212 (415)
T COG4553 180 TVPVLAAISLMEEDGDPNVPSSMTLMGGPIDAR 212 (415)
T ss_pred CchHHHHHHHHHhcCCCCCCceeeeecCccccc
Confidence 54 33334445566678889998887543
No 241
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=68.95 E-value=51 Score=31.27 Aligned_cols=97 Identities=16% Similarity=0.210 Sum_probs=60.9
Q ss_pred EEEEeCCCCCC-hhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCC---------C-------------cCCHHHHHHHH
Q 021765 97 KFVLIHGEGFG-AWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN---------S-------------VTTLAEYSKPL 153 (308)
Q Consensus 97 ~vvllHG~~~~-~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~---------~-------------~~~~~~~~~~l 153 (308)
+|+++ |-..+ ...+..+.+.+.+.|..++.+|.--.+....... . ...++...+.+
T Consensus 3 tI~ii-gT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 3 TIAII-GTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred EEEEE-EccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 44444 44444 4467778888899999999999744333221100 0 01122233344
Q ss_pred HHHHHHcCCC---CcEEEEEeChhHHHHHHHHHhCCccccEEEE
Q 021765 154 LDYLENLLED---EKVILVGHSSGGACVSYALEHFPQKISKAIF 194 (308)
Q Consensus 154 ~~~l~~l~~~---~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVl 194 (308)
..++..+... .-|+-+|-|.|..++..++...|--+-++++
T Consensus 82 ~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmV 125 (403)
T PF06792_consen 82 ARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMV 125 (403)
T ss_pred HHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEE
Confidence 4455544321 2688899999999999999999988888765
No 242
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=68.00 E-value=51 Score=25.02 Aligned_cols=76 Identities=18% Similarity=0.182 Sum_probs=53.3
Q ss_pred EEEEeCCCCCChhHHHHHHHHHHHC-CCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhH
Q 021765 97 KFVLIHGEGFGAWCWYKTVASLEEV-GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (308)
Q Consensus 97 ~vvllHG~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG 175 (308)
.||.-|| .-+......++.+... -..+.++++. ...+.+++.+.+.+.++.++.++.++++.-=+||
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~----------~~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~gg 69 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLY----------PDESIEDFEEKLEEAIEELDEGDGVLILTDLGGG 69 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEET----------TTSCHHHHHHHHHHHHHHCCTTSEEEEEESSTTS
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECc----------CCCCHHHHHHHHHHHHHhccCCCcEEEEeeCCCC
Confidence 5788899 5556666777777655 3467777754 2347889999999999888765578888777777
Q ss_pred HHHHHHHHh
Q 021765 176 ACVSYALEH 184 (308)
Q Consensus 176 ~~a~~~a~~ 184 (308)
.....++..
T Consensus 70 sp~n~a~~~ 78 (116)
T PF03610_consen 70 SPFNEAARL 78 (116)
T ss_dssp HHHHHHHHH
T ss_pred ccchHHHHH
Confidence 655555443
No 243
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=66.06 E-value=11 Score=36.64 Aligned_cols=85 Identities=15% Similarity=0.230 Sum_probs=54.4
Q ss_pred HHHHHHHCCCeEEEeCCCCCCCCCC--CCC---CcCCHHHHH--------HHHHHHHHHcC--CCCcEEEEEeChhHHHH
Q 021765 114 TVASLEEVGLIPTALDLKGSGIDLS--DTN---SVTTLAEYS--------KPLLDYLENLL--EDEKVILVGHSSGGACV 178 (308)
Q Consensus 114 ~~~~L~~~G~~vi~~D~~G~G~S~~--~~~---~~~~~~~~~--------~~l~~~l~~l~--~~~~v~lvGhS~GG~~a 178 (308)
+...+ .+||.++.=|- ||..+.. ... ....+.++. ..-.++++.+. ..+.-...|.|-||--+
T Consensus 52 ~~~~~-~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqg 129 (474)
T PF07519_consen 52 MATAL-ARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQG 129 (474)
T ss_pred cchhh-hcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchH
Confidence 34445 45999999984 6655432 111 111222222 22223444332 12478999999999999
Q ss_pred HHHHHhCCccccEEEEEccccC
Q 021765 179 SYALEHFPQKISKAIFLCATMV 200 (308)
Q Consensus 179 ~~~a~~~p~~v~~lVli~~~~~ 200 (308)
+..|++||+.++++|.-+|..-
T Consensus 130 l~~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 130 LMAAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred HHHHHhChhhcCeEEeCCchHH
Confidence 9999999999999998887753
No 244
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=65.45 E-value=31 Score=27.16 Aligned_cols=58 Identities=14% Similarity=0.148 Sum_probs=36.0
Q ss_pred CCCceEEEEeCCCCCChhHHH--HHHHHHHHCCCe---EE----EeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHH
Q 021765 92 NIQYKKFVLIHGEGFGAWCWY--KTVASLEEVGLI---PT----ALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN 159 (308)
Q Consensus 92 ~~~~~~vvllHG~~~~~~~~~--~~~~~L~~~G~~---vi----~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 159 (308)
++++|.|+-+||+.|....|- -+++.|-..|.. |. ..|+| ....+.++-+++..++..
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~~hFP----------~~~~v~~Yk~~L~~~I~~ 115 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIATHHFP----------HNSNVDEYKEQLKSWIRG 115 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeecccccCC----------CchHHHHHHHHHHHHHHH
Confidence 456788999999999988774 355665555532 22 22333 223566777777666654
No 245
>PRK02399 hypothetical protein; Provisional
Probab=62.59 E-value=1e+02 Score=29.31 Aligned_cols=95 Identities=20% Similarity=0.223 Sum_probs=58.9
Q ss_pred EEeCCCCCChh-HHHHHHHHHHHCCCeEEEeCCCCCCCCCCCC----------------------CCcCCHHHHHHHHHH
Q 021765 99 VLIHGEGFGAW-CWYKTVASLEEVGLIPTALDLKGSGIDLSDT----------------------NSVTTLAEYSKPLLD 155 (308)
Q Consensus 99 vllHG~~~~~~-~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~----------------------~~~~~~~~~~~~l~~ 155 (308)
|++=|-..++. .+..+.+.+.+.|..|+.+|.-..|...... .....++.+.+....
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 45556666654 5556677788889999999984333111000 000111233334444
Q ss_pred HHHHcC----CCCcEEEEEeChhHHHHHHHHHhCCccccEEEE
Q 021765 156 YLENLL----EDEKVILVGHSSGGACVSYALEHFPQKISKAIF 194 (308)
Q Consensus 156 ~l~~l~----~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lVl 194 (308)
+++.+. .+ -++-+|-|.|..++..++...|--+-++++
T Consensus 86 ~v~~L~~~g~i~-gviglGGs~GT~lat~aMr~LPiG~PKlmV 127 (406)
T PRK02399 86 FVRELYERGDVA-GVIGLGGSGGTALATPAMRALPIGVPKLMV 127 (406)
T ss_pred HHHHHHhcCCcc-EEEEecCcchHHHHHHHHHhCCCCCCeEEE
Confidence 554432 33 688899999999999999999987777765
No 246
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=62.50 E-value=44 Score=28.36 Aligned_cols=72 Identities=14% Similarity=0.116 Sum_probs=49.4
Q ss_pred HHHHHHHCCC-eEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeCh----hHHHHHHHHHhCC-c
Q 021765 114 TVASLEEVGL-IPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSS----GGACVSYALEHFP-Q 187 (308)
Q Consensus 114 ~~~~L~~~G~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~----GG~~a~~~a~~~p-~ 187 (308)
..+.+...|. +|+..|.++. ..++.+.+++.+.++++..+. .++|+|||. |..++..+|.+.. .
T Consensus 68 ~~~~l~~~G~d~V~~~~~~~~--------~~~~~e~~a~al~~~i~~~~p--~lVL~~~t~~~~~grdlaprlAarLga~ 137 (202)
T cd01714 68 ALREALAMGADRAILVSDRAF--------AGADTLATAKALAAAIKKIGV--DLILTGKQSIDGDTGQVGPLLAELLGWP 137 (202)
T ss_pred HHHHHHHcCCCEEEEEecccc--------cCCChHHHHHHHHHHHHHhCC--CEEEEcCCcccCCcCcHHHHHHHHhCCC
Confidence 3344455676 6888876543 234678888889898888763 799999998 7778888877643 2
Q ss_pred cccEEEEE
Q 021765 188 KISKAIFL 195 (308)
Q Consensus 188 ~v~~lVli 195 (308)
.+..++-+
T Consensus 138 lvsdv~~l 145 (202)
T cd01714 138 QITYVSKI 145 (202)
T ss_pred ccceEEEE
Confidence 34455444
No 247
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=62.22 E-value=14 Score=33.88 Aligned_cols=104 Identities=11% Similarity=0.071 Sum_probs=65.5
Q ss_pred CceEEEEeCCCCCChh----HHHHHHH-----------HHHHCCCeEEEeCCC-CCCCCCC--CCCCcCCHHHHHHHHHH
Q 021765 94 QYKKFVLIHGEGFGAW----CWYKTVA-----------SLEEVGLIPTALDLK-GSGIDLS--DTNSVTTLAEYSKPLLD 155 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~----~~~~~~~-----------~L~~~G~~vi~~D~~-G~G~S~~--~~~~~~~~~~~~~~l~~ 155 (308)
..|..+.+.|..+.+. .|+.+-+ .|.. -.++.+|-| |.|.|-- ......+..+.+.|+.+
T Consensus 30 ~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~ 107 (414)
T KOG1283|consen 30 ERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVE 107 (414)
T ss_pred CCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeecCcccccccHHHHHHHHHH
Confidence 4567788887765443 2322211 2222 467888877 7777643 22234467788889988
Q ss_pred HHHHcCC------CCcEEEEEeChhHHHHHHHHHhCCc---------cccEEEEEcccc
Q 021765 156 YLENLLE------DEKVILVGHSSGGACVSYALEHFPQ---------KISKAIFLCATM 199 (308)
Q Consensus 156 ~l~~l~~------~~~v~lvGhS~GG~~a~~~a~~~p~---------~v~~lVli~~~~ 199 (308)
+++.+-. ..++.|+..|+||-++...+..... .+.++++=++.+
T Consensus 108 llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWI 166 (414)
T KOG1283|consen 108 LLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWI 166 (414)
T ss_pred HHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCccc
Confidence 8887521 1489999999999998877654322 355666666654
No 248
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=60.62 E-value=56 Score=29.26 Aligned_cols=40 Identities=15% Similarity=0.236 Sum_probs=27.8
Q ss_pred CHHHHHHHHHHHH-HHcCCCCcEEEEEeChhHHHHHHHHHh
Q 021765 145 TLAEYSKPLLDYL-ENLLEDEKVILVGHSSGGACVSYALEH 184 (308)
Q Consensus 145 ~~~~~~~~l~~~l-~~l~~~~~v~lvGhS~GG~~a~~~a~~ 184 (308)
.+.+.+.....++ +......+|.++|+|=|+..|..++..
T Consensus 72 g~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 72 GIEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred chHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 4555555444443 555555589999999999999988864
No 249
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=59.42 E-value=79 Score=24.26 Aligned_cols=72 Identities=15% Similarity=0.075 Sum_probs=49.3
Q ss_pred EEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhHH
Q 021765 97 KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGA 176 (308)
Q Consensus 97 ~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG~ 176 (308)
.||.-|| .-+......++.+....-.+.++++. ...+.+++.+.+.+.++..+..+.++++.-=+||.
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~----------~~~~~~~~~~~i~~~i~~~~~~~~viil~Dl~GGS 70 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFP----------PGESPDDLLEKIKAALAELDSGEGVLILTDLFGGS 70 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeC----------CCCCHHHHHHHHHHHHHHhCCCCcEEEEEeCCCCC
Confidence 5788899 44555566666665433467777764 22478888888888898886544777777666887
Q ss_pred HHHH
Q 021765 177 CVSY 180 (308)
Q Consensus 177 ~a~~ 180 (308)
....
T Consensus 71 p~n~ 74 (122)
T cd00006 71 PNNA 74 (122)
T ss_pred HHHH
Confidence 6543
No 250
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=57.74 E-value=29 Score=31.25 Aligned_cols=94 Identities=19% Similarity=0.117 Sum_probs=50.3
Q ss_pred eCCCCCChhHHHHHHHHHHHCCCeEEEe------CCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCC--CCcEEEEEeC
Q 021765 101 IHGEGFGAWCWYKTVASLEEVGLIPTAL------DLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE--DEKVILVGHS 172 (308)
Q Consensus 101 lHG~~~~~~~~~~~~~~L~~~G~~vi~~------D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~--~~~v~lvGhS 172 (308)
+||.-++... +..|...|++|.++ +++|+|...+..... ++..++.+-++..+. .-+.++-|+
T Consensus 11 v~G~vGn~AA----~f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v~~~----e~l~~~l~~l~~~~~~~~~davltGY- 81 (281)
T COG2240 11 VYGSVGNSAA----IFPLQRLGLDVWAVPTVQFSNHTGYGKWTGIVMPP----EQLADLLNGLEAIDKLGECDAVLTGY- 81 (281)
T ss_pred eecccccHhH----HHHHHHcCCceeeeceEEecCCCCCCCCCCcCCCH----HHHHHHHHHHHhcccccccCEEEEcc-
Confidence 5676666543 22455668776554 789999866544333 333333333333211 125677775
Q ss_pred hhHH-----HHHHHHHhCCccccEEEEEccccCCCC
Q 021765 173 SGGA-----CVSYALEHFPQKISKAIFLCATMVSDG 203 (308)
Q Consensus 173 ~GG~-----~a~~~a~~~p~~v~~lVli~~~~~~~g 203 (308)
+|.. ++-.+.+.....-+.+++++|.+..+|
T Consensus 82 lgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~g 117 (281)
T COG2240 82 LGSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPG 117 (281)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCC
Confidence 2222 333332222223457799999998877
No 251
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=52.05 E-value=14 Score=30.88 Aligned_cols=34 Identities=15% Similarity=0.187 Sum_probs=25.0
Q ss_pred eEEEEeCCC---CCChhHHHHHHHHHHHCCCeEEEeC
Q 021765 96 KKFVLIHGE---GFGAWCWYKTVASLEEVGLIPTALD 129 (308)
Q Consensus 96 ~~vvllHG~---~~~~~~~~~~~~~L~~~G~~vi~~D 129 (308)
..||++|.. ..+......+++.|.++||+++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 359999942 2234456788999999999998864
No 252
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=51.76 E-value=19 Score=32.14 Aligned_cols=29 Identities=21% Similarity=0.209 Sum_probs=22.5
Q ss_pred HHHHHHcCCCCcEEEEEeChhHHHHHHHHH
Q 021765 154 LDYLENLLEDEKVILVGHSSGGACVSYALE 183 (308)
Q Consensus 154 ~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~ 183 (308)
.+.++..+.. +-.++|||+|-+.|+.++.
T Consensus 73 ~~~l~~~Gi~-p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 73 ARLWRSWGVR-PDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHcCCc-ccEEEecCHHHHHHHHHhC
Confidence 3556666776 7899999999998877664
No 253
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=49.71 E-value=22 Score=31.77 Aligned_cols=34 Identities=15% Similarity=0.158 Sum_probs=28.3
Q ss_pred eEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeC
Q 021765 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALD 129 (308)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D 129 (308)
..||++|-...+......+++.|.++||+++.++
T Consensus 231 G~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 3688999776667777889999999999998874
No 254
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=47.63 E-value=25 Score=31.49 Aligned_cols=29 Identities=21% Similarity=0.143 Sum_probs=22.1
Q ss_pred HHHHHHcCCCCcEEEEEeChhHHHHHHHHH
Q 021765 154 LDYLENLLEDEKVILVGHSSGGACVSYALE 183 (308)
Q Consensus 154 ~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~ 183 (308)
.+.++..+.. +..++|||+|=+.|..++.
T Consensus 67 ~~~l~~~g~~-P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 67 WRALLALLPR-PSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHhcCCC-CcEEeecCHHHHHHHHHhC
Confidence 3455666765 8899999999988877664
No 255
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=47.28 E-value=14 Score=33.70 Aligned_cols=29 Identities=21% Similarity=0.131 Sum_probs=22.2
Q ss_pred HHHHHHcCCCCcEEEEEeChhHHHHHHHHH
Q 021765 154 LDYLENLLEDEKVILVGHSSGGACVSYALE 183 (308)
Q Consensus 154 ~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~ 183 (308)
.+.++..+.. +-.++|||+|=+.|+.++.
T Consensus 75 ~~~l~~~Gi~-P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 75 ARLLRSWGIK-PDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHTTHC-ESEEEESTTHHHHHHHHTT
T ss_pred hhhhcccccc-cceeeccchhhHHHHHHCC
Confidence 4555666665 7899999999998887754
No 256
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=46.51 E-value=25 Score=30.34 Aligned_cols=34 Identities=26% Similarity=0.274 Sum_probs=27.0
Q ss_pred eEEEEeCCC-CCChhHHHHHHHHHHHCCCeEEEeC
Q 021765 96 KKFVLIHGE-GFGAWCWYKTVASLEEVGLIPTALD 129 (308)
Q Consensus 96 ~~vvllHG~-~~~~~~~~~~~~~L~~~G~~vi~~D 129 (308)
..||++|.. ..+......+++.|.++||+++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 468999974 4455667789999999999998874
No 257
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=45.92 E-value=69 Score=26.12 Aligned_cols=35 Identities=14% Similarity=-0.077 Sum_probs=26.4
Q ss_pred eEEEEeCCCCCChhHH--HHHHHHHHHCCCeEEEeCC
Q 021765 96 KKFVLIHGEGFGAWCW--YKTVASLEEVGLIPTALDL 130 (308)
Q Consensus 96 ~~vvllHG~~~~~~~~--~~~~~~L~~~G~~vi~~D~ 130 (308)
+.+|++-|..++...- ..+.+.|.+.|+.++.+|-
T Consensus 2 g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 2 GFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp -EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 5789999998887643 3577788889999999974
No 258
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=45.20 E-value=56 Score=29.16 Aligned_cols=70 Identities=9% Similarity=0.006 Sum_probs=46.9
Q ss_pred ceEEEEeCCCCCChh--HHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeC
Q 021765 95 YKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (308)
Q Consensus 95 ~~~vvllHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (308)
.|+||++.|+.+++. .-..+...|..+|++|.++.-|. .-+..-.-+-.+-..+...+.+.|+=-|
T Consensus 55 ~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~Pt------------~eE~~~p~lWRfw~~lP~~G~i~IF~RS 122 (264)
T TIGR03709 55 RSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAPS------------AEELDHDFLWRIHKALPERGEIGIFNRS 122 (264)
T ss_pred CcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC------------HHHHcCchHHHHHHhCCCCCeEEEEcCc
Confidence 479999999987755 45578888888999999986541 1111122234466667665688888666
Q ss_pred hhHH
Q 021765 173 SGGA 176 (308)
Q Consensus 173 ~GG~ 176 (308)
+=+-
T Consensus 123 WY~~ 126 (264)
T TIGR03709 123 HYED 126 (264)
T ss_pred cccc
Confidence 5433
No 259
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=44.61 E-value=1.9e+02 Score=24.33 Aligned_cols=76 Identities=21% Similarity=0.128 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhC-C-c
Q 021765 110 CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHF-P-Q 187 (308)
Q Consensus 110 ~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~-p-~ 187 (308)
......+.+.++++.++.+|-+|.. ..-.+..+++.++++..... .+++|--+..+.-.+..+..+ . -
T Consensus 71 ~~~~~l~~~~~~~~D~vlIDT~Gr~---------~~d~~~~~el~~~~~~~~~~-~~~LVlsa~~~~~~~~~~~~~~~~~ 140 (196)
T PF00448_consen 71 IAREALEKFRKKGYDLVLIDTAGRS---------PRDEELLEELKKLLEALNPD-EVHLVLSATMGQEDLEQALAFYEAF 140 (196)
T ss_dssp HHHHHHHHHHHTTSSEEEEEE-SSS---------STHHHHHHHHHHHHHHHSSS-EEEEEEEGGGGGHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhhcCCCEEEEecCCcc---------hhhHHHHHHHHHHhhhcCCc-cceEEEecccChHHHHHHHHHhhcc
Confidence 3444556677778999999998765 13456667777777777655 666666555555444443332 2 2
Q ss_pred cccEEEEE
Q 021765 188 KISKAIFL 195 (308)
Q Consensus 188 ~v~~lVli 195 (308)
.+.++|+-
T Consensus 141 ~~~~lIlT 148 (196)
T PF00448_consen 141 GIDGLILT 148 (196)
T ss_dssp STCEEEEE
T ss_pred cCceEEEE
Confidence 47888864
No 260
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=44.48 E-value=53 Score=26.02 Aligned_cols=34 Identities=18% Similarity=0.436 Sum_probs=22.8
Q ss_pred ceEEEEeCCCC-------------CChhHHH-----------HHHHHHHHCCCeEEEe
Q 021765 95 YKKFVLIHGEG-------------FGAWCWY-----------KTVASLEEVGLIPTAL 128 (308)
Q Consensus 95 ~~~vvllHG~~-------------~~~~~~~-----------~~~~~L~~~G~~vi~~ 128 (308)
-.++||+||-. .+.+.|. ..+..|.+.|++|+.+
T Consensus 57 y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvV 114 (150)
T COG3727 57 YRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVV 114 (150)
T ss_pred ceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEE
Confidence 46899999942 1233553 2445788889998875
No 261
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=44.12 E-value=43 Score=30.14 Aligned_cols=51 Identities=20% Similarity=0.297 Sum_probs=33.6
Q ss_pred HHHHHHHHHHcCCC--CcEEEEEeChhHHHHHHHH---HhCCccccEEEEEccccC
Q 021765 150 SKPLLDYLENLLED--EKVILVGHSSGGACVSYAL---EHFPQKISKAIFLCATMV 200 (308)
Q Consensus 150 ~~~l~~~l~~l~~~--~~v~lvGhS~GG~~a~~~a---~~~p~~v~~lVli~~~~~ 200 (308)
.+.|.+.+..+..+ -+++|.|.|+|++-+..+- ...-+++.++++.+++..
T Consensus 93 ~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 93 FEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFF 148 (289)
T ss_pred HHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCC
Confidence 34444455555432 3799999999998665432 233457999999888753
No 262
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=42.98 E-value=30 Score=30.70 Aligned_cols=28 Identities=21% Similarity=0.024 Sum_probs=21.0
Q ss_pred HHHHHcC-CCCcEEEEEeChhHHHHHHHHH
Q 021765 155 DYLENLL-EDEKVILVGHSSGGACVSYALE 183 (308)
Q Consensus 155 ~~l~~l~-~~~~v~lvGhS~GG~~a~~~a~ 183 (308)
+.+...+ .. +..++|||+|=+.|..++.
T Consensus 74 ~~l~~~g~i~-p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 74 LKLKEQGGLK-PDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHHcCCCC-CCEEeecCHHHHHHHHHhC
Confidence 4445555 65 8899999999988877664
No 263
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=42.65 E-value=1.8e+02 Score=27.06 Aligned_cols=35 Identities=11% Similarity=0.040 Sum_probs=27.2
Q ss_pred EEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCC
Q 021765 98 FVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSG 134 (308)
Q Consensus 98 vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G 134 (308)
|+|+|...- ..|..+++.|.++|+.|..+-..+.+
T Consensus 2 il~~~~~~p--~~~~~la~~L~~~G~~v~~~~~~~~~ 36 (396)
T cd03818 2 ILFVHQNFP--GQFRHLAPALAAQGHEVVFLTEPNAA 36 (396)
T ss_pred EEEECCCCc--hhHHHHHHHHHHCCCEEEEEecCCCC
Confidence 788988643 44788999999999999887665543
No 264
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=42.53 E-value=2.8e+02 Score=26.38 Aligned_cols=74 Identities=12% Similarity=0.089 Sum_probs=40.7
Q ss_pred ceEEEEeCCCCCChh---HHHHHHHHHHHCCCeEEEeCCCCC---CCCCCCCCCcCCHHHHHHHHHHHHHHcCC-CCcEE
Q 021765 95 YKKFVLIHGEGFGAW---CWYKTVASLEEVGLIPTALDLKGS---GIDLSDTNSVTTLAEYSKPLLDYLENLLE-DEKVI 167 (308)
Q Consensus 95 ~~~vvllHG~~~~~~---~~~~~~~~L~~~G~~vi~~D~~G~---G~S~~~~~~~~~~~~~~~~l~~~l~~l~~-~~~v~ 167 (308)
+.++|+++.+....+ ....-+..|.+.|+.|+-++ +|+ |... .....+.++.+..+...+..... +.++.
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g--~gr~~~~~~I~~~~~~~~~~~~l~gk~vl 192 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVG--PGRMAEPEEIVAAAERALSPKDLAGKRVL 192 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcC--CCCCCCHHHHHHHHHHHhhhcccCCCEEE
Confidence 457777775432222 23456677888899988664 332 2221 12334677777777666643222 23555
Q ss_pred EEEe
Q 021765 168 LVGH 171 (308)
Q Consensus 168 lvGh 171 (308)
+.|-
T Consensus 193 ITgG 196 (399)
T PRK05579 193 ITAG 196 (399)
T ss_pred EeCC
Confidence 6665
No 265
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=42.08 E-value=94 Score=28.19 Aligned_cols=71 Identities=14% Similarity=0.213 Sum_probs=46.1
Q ss_pred ceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCC--------CCC--C-CCCCC---CcCCHHHHHHHHHHHHHHc
Q 021765 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKG--------SGI--D-LSDTN---SVTTLAEYSKPLLDYLENL 160 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G--------~G~--S-~~~~~---~~~~~~~~~~~l~~~l~~l 160 (308)
-|-|+|..|.++ .++.|+..||.|+..||.= .|. + .++.+ -..+.+...+.+.+.++..
T Consensus 252 vPmi~fakG~g~-------~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~f 324 (359)
T KOG2872|consen 252 VPMILFAKGSGG-------ALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKDF 324 (359)
T ss_pred CceEEEEcCcch-------HHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHHh
Confidence 478899998763 5677888999999999852 111 1 01111 1235566677777888888
Q ss_pred CCCCcEEEEEeC
Q 021765 161 LEDEKVILVGHS 172 (308)
Q Consensus 161 ~~~~~v~lvGhS 172 (308)
+...-|.=+||-
T Consensus 325 G~~ryI~NLGHG 336 (359)
T KOG2872|consen 325 GKSRYIANLGHG 336 (359)
T ss_pred CccceEEecCCC
Confidence 866456666764
No 266
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=41.90 E-value=1.9e+02 Score=27.15 Aligned_cols=75 Identities=16% Similarity=0.052 Sum_probs=45.9
Q ss_pred CCceEEEEeCCCCCChhHHHHHHHHHHHCCC-eEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEE-EE
Q 021765 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGL-IPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVIL-VG 170 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~l-vG 170 (308)
..+.+|++--|...+.+.|..-++.+...|- .++.. .+|. |..+.....++ ....+..+-+..+. +|++ ..
T Consensus 223 ~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~-erg~--s~yp~~~~~~l--dl~~i~~lk~~~~~--PV~~d~~ 295 (360)
T PRK12595 223 RVNKPVLLKRGLSATIEEFIYAAEYIMSQGNGQIILC-ERGI--RTYEKATRNTL--DISAVPILKQETHL--PVMVDVT 295 (360)
T ss_pred ccCCcEEEeCCCCCCHHHHHHHHHHHHHCCCCCEEEE-CCcc--CCCCCCCCCCc--CHHHHHHHHHHhCC--CEEEeCC
Confidence 3467999999999999999999999988776 44444 3333 33222112222 22222222222443 6777 79
Q ss_pred eChh
Q 021765 171 HSSG 174 (308)
Q Consensus 171 hS~G 174 (308)
||.|
T Consensus 296 Hs~G 299 (360)
T PRK12595 296 HSTG 299 (360)
T ss_pred CCCc
Confidence 9987
No 267
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=41.73 E-value=1.1e+02 Score=26.35 Aligned_cols=36 Identities=22% Similarity=0.252 Sum_probs=27.3
Q ss_pred ceEEEEeCCCCCChhH--H-HHHHHHHHHCCCeEEEeCC
Q 021765 95 YKKFVLIHGEGFGAWC--W-YKTVASLEEVGLIPTALDL 130 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~--~-~~~~~~L~~~G~~vi~~D~ 130 (308)
.+.|.|++=.+...+. | ....+.|.+.|+.+.-+++
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 5789999977666543 3 3677789999999888875
No 268
>PHA02114 hypothetical protein
Probab=40.17 E-value=36 Score=25.42 Aligned_cols=34 Identities=26% Similarity=0.320 Sum_probs=29.5
Q ss_pred eEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeC
Q 021765 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALD 129 (308)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D 129 (308)
-+||+---+..+..-|..++..|.+.||+|++-.
T Consensus 83 gtivldvn~amsr~pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 83 GTIVLDVNYAMSRAPWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred CeEEEEehhhhccCcHHHHHHHHHhcCceeeehh
Confidence 3788888888899999999999999999999753
No 269
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=39.49 E-value=66 Score=26.93 Aligned_cols=61 Identities=18% Similarity=0.252 Sum_probs=38.4
Q ss_pred CceEEEEeCCCCCCh---hHHHHHHHHHHHCCCeEEEeCCCC--CCCCCCCCCCcCCHHHHHHHHHHHHHH
Q 021765 94 QYKKFVLIHGEGFGA---WCWYKTVASLEEVGLIPTALDLKG--SGIDLSDTNSVTTLAEYSKPLLDYLEN 159 (308)
Q Consensus 94 ~~~~vvllHG~~~~~---~~~~~~~~~L~~~G~~vi~~D~~G--~G~S~~~~~~~~~~~~~~~~l~~~l~~ 159 (308)
..++++++||..+.. ..-..+.+.|.+.|..+...-+|+ |+... .....++.+.+.+++++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~-----~~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGN-----PENRRDWYERILDFFDK 208 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTS-----HHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCC-----chhHHHHHHHHHHHHHH
Confidence 468999999986543 334467888888887766666654 54221 12333556666666654
No 270
>COG3933 Transcriptional antiterminator [Transcription]
Probab=39.00 E-value=2.9e+02 Score=26.71 Aligned_cols=72 Identities=18% Similarity=0.114 Sum_probs=51.6
Q ss_pred ceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChh
Q 021765 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSG 174 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 174 (308)
-..||+.||.. ++.+....+..|... --+.++|+| -..+..+..+.+.+.+++.+.. +=+++=-.||
T Consensus 109 v~vIiiAHG~s-TASSmaevanrLL~~-~~~~aiDMP----------Ldvsp~~vle~l~e~~k~~~~~-~GlllLVDMG 175 (470)
T COG3933 109 VKVIIIAHGYS-TASSMAEVANRLLGE-EIFIAIDMP----------LDVSPSDVLEKLKEYLKERDYR-SGLLLLVDMG 175 (470)
T ss_pred eeEEEEecCcc-hHHHHHHHHHHHhhc-cceeeecCC----------CcCCHHHHHHHHHHHHHhcCcc-CceEEEEecc
Confidence 45899999975 455566777777765 468899998 3457888999999999988765 3233334788
Q ss_pred HHHHH
Q 021765 175 GACVS 179 (308)
Q Consensus 175 G~~a~ 179 (308)
.....
T Consensus 176 SL~~f 180 (470)
T COG3933 176 SLTSF 180 (470)
T ss_pred hHHHH
Confidence 87543
No 271
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=38.77 E-value=1.4e+02 Score=23.23 Aligned_cols=90 Identities=8% Similarity=-0.020 Sum_probs=43.5
Q ss_pred CCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCC------------CCCcCCHHHHHHHHHHHHHHcCCCCcEEEEE
Q 021765 103 GEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSD------------TNSVTTLAEYSKPLLDYLENLLEDEKVILVG 170 (308)
Q Consensus 103 G~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~------------~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvG 170 (308)
+.||.......+++.|.++|+.|..+-...-+..... .............+...++.... +++ ..
T Consensus 10 ~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--DiV-h~ 86 (177)
T PF13439_consen 10 NIGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEELVKIFVKIPYPIRKRFLRSFFFMRRLRRLIKKEKP--DIV-HI 86 (177)
T ss_dssp SSSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SSTEEEE---TT-SSTSS--HHHHHHHHHHHHHHHHT---SEE-EC
T ss_pred CCChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhhccceeeeeecccccccchhHHHHHHHHHHHHHcCC--CeE-Ee
Confidence 3444455667899999999999888744332221111 00111112223445556665544 333 56
Q ss_pred eChhHHHHHHHHHhCCccccEEEEEccc
Q 021765 171 HSSGGACVSYALEHFPQKISKAIFLCAT 198 (308)
Q Consensus 171 hS~GG~~a~~~a~~~p~~v~~lVli~~~ 198 (308)
|..........+.. .+..++.+-..
T Consensus 87 ~~~~~~~~~~~~~~---~~~~v~~~H~~ 111 (177)
T PF13439_consen 87 HGPPAFWIALLACR---KVPIVYTIHGP 111 (177)
T ss_dssp CTTHCCCHHHHHHH---CSCEEEEE-HH
T ss_pred cccchhHHHHHhcc---CCCEEEEeCCC
Confidence 66655544333333 45555555443
No 272
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=38.69 E-value=86 Score=27.36 Aligned_cols=70 Identities=13% Similarity=0.107 Sum_probs=47.6
Q ss_pred ceEEEEeCCCCCChh--HHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeC
Q 021765 95 YKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (308)
Q Consensus 95 ~~~vvllHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (308)
.|+||++.|+.+++. .-..+...|..+|++|.++.-|. .-+..-.-+-.+-+.+...+.+.|+=-|
T Consensus 30 ~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt------------~eE~~~p~lwRfw~~lP~~G~i~IF~rS 97 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPS------------DRERTQWYFQRYVQHLPAAGEIVLFDRS 97 (230)
T ss_pred CCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC------------HHHHcChHHHHHHHhCCCCCeEEEEeCc
Confidence 479999999977755 45578888888999999987551 1111222344566677766688888777
Q ss_pred hhHH
Q 021765 173 SGGA 176 (308)
Q Consensus 173 ~GG~ 176 (308)
+=+-
T Consensus 98 wY~~ 101 (230)
T TIGR03707 98 WYNR 101 (230)
T ss_pred hhhh
Confidence 5444
No 273
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=37.81 E-value=2.1e+02 Score=25.78 Aligned_cols=54 Identities=24% Similarity=0.349 Sum_probs=29.3
Q ss_pred HHHHHHHHHHCCCe--EEEeCCCCCCCCCCCCCCcCCHHHHH---HHHHHHHHHcCCCCcEEEEEeChhHH
Q 021765 111 WYKTVASLEEVGLI--PTALDLKGSGIDLSDTNSVTTLAEYS---KPLLDYLENLLEDEKVILVGHSSGGA 176 (308)
Q Consensus 111 ~~~~~~~L~~~G~~--vi~~D~~G~G~S~~~~~~~~~~~~~~---~~l~~~l~~l~~~~~v~lvGhS~GG~ 176 (308)
+...++.+.+.|.. =+.+| ||+|... +.++.. +.+.. ++.++ .-+++|+|==.+
T Consensus 165 l~~~i~~a~~~GI~~~~IilD-PGiGF~k-------~~~~n~~ll~~l~~-l~~lg---~Pilvg~SRKsf 223 (282)
T PRK11613 165 FIEQIARCEAAGIAKEKLLLD-PGFGFGK-------NLSHNYQLLARLAE-FHHFN---LPLLVGMSRKSM 223 (282)
T ss_pred HHHHHHHHHHcCCChhhEEEe-CCCCcCC-------CHHHHHHHHHHHHH-HHhCC---CCEEEEecccHH
Confidence 34555667778885 67778 4777533 222222 22222 23344 348899994433
No 274
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=37.03 E-value=2.7e+02 Score=24.20 Aligned_cols=38 Identities=18% Similarity=0.220 Sum_probs=24.2
Q ss_pred ceEEEEeCCCCCChhHHHHHH-HHHHHCCC-eEEEeCCCC
Q 021765 95 YKKFVLIHGEGFGAWCWYKTV-ASLEEVGL-IPTALDLKG 132 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~-~~L~~~G~-~vi~~D~~G 132 (308)
..+|++.||....+...+..+ ..|.+.|| .|+....-|
T Consensus 138 e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~ 177 (265)
T COG4822 138 EILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEG 177 (265)
T ss_pred eEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecC
Confidence 457888899887776554444 45667777 555554433
No 275
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=35.98 E-value=53 Score=29.96 Aligned_cols=63 Identities=17% Similarity=0.063 Sum_probs=39.5
Q ss_pred hHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhC
Q 021765 109 WCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHF 185 (308)
Q Consensus 109 ~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~ 185 (308)
.+|..+++.|.... ..++++ |=| ..--...-+.+.+++.+.. .-.++|-|+|+.++..++..+
T Consensus 2 ~d~~rl~r~l~~~~-~gLvL~--GGG----------~RG~ahiGvL~aLee~gi~-~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 2 SDFSRLARVLTGNS-IALVLG--GGG----------ARGCAHIGVIKALEEAGIP-VDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred ChHHHHHHHhcCCC-EEEEEC--ChH----------HHHHHHHHHHHHHHHcCCC-CCEEEEECHHHHHHHHHHcCC
Confidence 35777888887642 333333 211 1122333455666666775 668899999999999888763
No 276
>PRK14457 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=35.72 E-value=2.6e+02 Score=26.02 Aligned_cols=75 Identities=11% Similarity=-0.057 Sum_probs=46.3
Q ss_pred EEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhHH
Q 021765 97 KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGA 176 (308)
Q Consensus 97 ~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG~ 176 (308)
-+++++|+..+.+.-..+++.+...+..|-.+-+--.|.+.... .+ .+.++.+.+.++..+.. +.+..|.|-=
T Consensus 259 ey~LIpGvNDs~e~a~~La~~l~~l~~~VnLIPynp~~~~~~~~---ps-~e~i~~f~~~L~~~Gi~---vtvR~~~G~d 331 (345)
T PRK14457 259 EYILLGGVNDLPEHAEELANLLRGFQSHVNLIPYNPIDEVEFQR---PS-PKRIQAFQRVLEQRGVA---VSVRASRGLD 331 (345)
T ss_pred EEEEECCcCCCHHHHHHHHHHHhcCCCeEEEecCCCCCCCCCCC---CC-HHHHHHHHHHHHHCCCe---EEEeCCCCCc
Confidence 36899999999999888888887644444444332233332221 12 34455566667666653 5678999865
Q ss_pred HH
Q 021765 177 CV 178 (308)
Q Consensus 177 ~a 178 (308)
+.
T Consensus 332 i~ 333 (345)
T PRK14457 332 AN 333 (345)
T ss_pred hh
Confidence 44
No 277
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=35.35 E-value=86 Score=29.23 Aligned_cols=84 Identities=15% Similarity=0.264 Sum_probs=51.7
Q ss_pred EEEEeCCCCCChh-------HHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEE
Q 021765 97 KFVLIHGEGFGAW-------CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILV 169 (308)
Q Consensus 97 ~vvllHG~~~~~~-------~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lv 169 (308)
.+|++|+...+.. .|..+.+.+.++ -.+-.+|....|..++ +++.++..+..+++. + .-+++
T Consensus 199 s~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k-~~~pffDmAYQGfaSG------~~d~DA~avR~F~~~-g---~~~~l 267 (427)
T KOG1411|consen 199 SIILLHACAHNPTGVDPTKEQWEKISDLIKEK-NLLPFFDMAYQGFASG------DLDKDAQAVRLFVED-G---HEILL 267 (427)
T ss_pred cEEEeehhhcCCCCCCccHHHHHHHHHHhhhc-cccchhhhhhcccccC------CchhhHHHHHHHHHc-C---CceEe
Confidence 6899998777654 899888877765 3344567766665433 556677777777654 2 33566
Q ss_pred EeChhHHHHHHHHHhCCccccEEEEEc
Q 021765 170 GHSSGGACVSYALEHFPQKISKAIFLC 196 (308)
Q Consensus 170 GhS~GG~~a~~~a~~~p~~v~~lVli~ 196 (308)
..|+.-.+.+ |.++|.++-++|
T Consensus 268 aQSyAKNMGL-----YgERvGa~svvc 289 (427)
T KOG1411|consen 268 AQSYAKNMGL-----YGERVGALSVVC 289 (427)
T ss_pred ehhhhhhcch-----hhhccceeEEEe
Confidence 6666544433 334555554433
No 278
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=34.79 E-value=3.5e+02 Score=25.59 Aligned_cols=74 Identities=11% Similarity=0.052 Sum_probs=40.7
Q ss_pred eEEEEeCCCCCChh---HHHHHHHHHHHCCCeEEEeCCCC--CCCCCCCCCCcCCHHHHHHHHHHHHHHc-CC-CCcEEE
Q 021765 96 KKFVLIHGEGFGAW---CWYKTVASLEEVGLIPTALDLKG--SGIDLSDTNSVTTLAEYSKPLLDYLENL-LE-DEKVIL 168 (308)
Q Consensus 96 ~~vvllHG~~~~~~---~~~~~~~~L~~~G~~vi~~D~~G--~G~S~~~~~~~~~~~~~~~~l~~~l~~l-~~-~~~v~l 168 (308)
.++|+++-+....+ ....-+..|.+.|+.|+-+..-- +|... .....+.++.+..+...+... .. +.++.+
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g--~g~~~~~~~i~~~v~~~~~~~~~~~~~~vli 190 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDEG--KGRLAEPETIVKAAEREFSPKEDLEGKRVLI 190 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCccccccccc--CCCCCCHHHHHHHHHHHHhhccccCCceEEE
Confidence 57777776433322 34556677888888877665211 23221 123346777777777766441 11 225555
Q ss_pred EEe
Q 021765 169 VGH 171 (308)
Q Consensus 169 vGh 171 (308)
.|-
T Consensus 191 t~g 193 (390)
T TIGR00521 191 TAG 193 (390)
T ss_pred ecC
Confidence 555
No 279
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=34.76 E-value=61 Score=26.43 Aligned_cols=34 Identities=15% Similarity=0.032 Sum_probs=25.0
Q ss_pred HHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhCC
Q 021765 152 PLLDYLENLLEDEKVILVGHSSGGACVSYALEHFP 186 (308)
Q Consensus 152 ~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p 186 (308)
-+.+.++..+.. .-.++|-|.|+.++..++...+
T Consensus 15 Gvl~aL~e~gi~-~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 15 GVAKALRERGPL-IDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHHcCCC-CCEEEEECHHHHHHHHHHcCCC
Confidence 344555555665 6789999999999998887643
No 280
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=34.63 E-value=53 Score=29.74 Aligned_cols=32 Identities=19% Similarity=0.195 Sum_probs=24.2
Q ss_pred HHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhC
Q 021765 153 LLDYLENLLEDEKVILVGHSSGGACVSYALEHF 185 (308)
Q Consensus 153 l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~ 185 (308)
+.+.|+..+.. .-+|.|-|+|+.++..+|..+
T Consensus 29 Vl~aL~e~gi~-~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 29 VLKALEEAGIP-IDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHcCCC-ccEEEecCHHHHHHHHHHcCC
Confidence 44555555555 778999999999999888754
No 281
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=34.14 E-value=3.1e+02 Score=25.59 Aligned_cols=35 Identities=17% Similarity=0.302 Sum_probs=23.9
Q ss_pred CcEEEEEeC-hhHHHHHHHHHhCCccccEEEEEccccCC
Q 021765 164 EKVILVGHS-SGGACVSYALEHFPQKISKAIFLCATMVS 201 (308)
Q Consensus 164 ~~v~lvGhS-~GG~~a~~~a~~~p~~v~~lVli~~~~~~ 201 (308)
.+|.|+|-. .|+.++..++.. .|..+++++.-...
T Consensus 136 ~~VlvvG~GG~Gs~ia~~La~~---Gvg~i~lvD~d~v~ 171 (376)
T PRK08762 136 ARVLLIGAGGLGSPAALYLAAA---GVGTLGIVDHDVVD 171 (376)
T ss_pred CcEEEECCCHHHHHHHHHHHHc---CCCeEEEEeCCEec
Confidence 489999864 455566666553 47889999887543
No 282
>PRK09936 hypothetical protein; Provisional
Probab=33.80 E-value=1.5e+02 Score=26.85 Aligned_cols=51 Identities=10% Similarity=-0.067 Sum_probs=35.9
Q ss_pred ChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCC
Q 021765 107 GAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE 162 (308)
Q Consensus 107 ~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~ 162 (308)
+...|..+.+.+...|++.+.+.+-++|.++... -+-+...+.+.....+.
T Consensus 36 ~~~qWq~~~~~~~~~G~~tLivQWt~yG~~~fg~-----~~g~La~~l~~A~~~Gl 86 (296)
T PRK09936 36 TDTQWQGLWSQLRLQGFDTLVVQWTRYGDADFGG-----QRGWLAKRLAAAQQAGL 86 (296)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeeeccCCCccc-----chHHHHHHHHHHHHcCC
Confidence 4568999999999999999999999998763221 23444444444444443
No 283
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=33.80 E-value=2.3e+02 Score=27.27 Aligned_cols=69 Identities=20% Similarity=0.164 Sum_probs=45.5
Q ss_pred HHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhCCc--cccEEEE
Q 021765 117 SLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQ--KISKAIF 194 (308)
Q Consensus 117 ~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p~--~v~~lVl 194 (308)
.+...+|.|+.+|-.|.= .--++..+.+.++-+.+..+ .+.+|--+|=|.-|...|..+.+ .+.++|+
T Consensus 177 ~ak~~~~DvvIvDTAGRl---------~ide~Lm~El~~Ik~~~~P~-E~llVvDam~GQdA~~~A~aF~e~l~itGvIl 246 (451)
T COG0541 177 KAKEEGYDVVIVDTAGRL---------HIDEELMDELKEIKEVINPD-ETLLVVDAMIGQDAVNTAKAFNEALGITGVIL 246 (451)
T ss_pred HHHHcCCCEEEEeCCCcc---------cccHHHHHHHHHHHhhcCCC-eEEEEEecccchHHHHHHHHHhhhcCCceEEE
Confidence 344456677777755421 12234556666666666666 88899999999988888877655 3677777
Q ss_pred E
Q 021765 195 L 195 (308)
Q Consensus 195 i 195 (308)
-
T Consensus 247 T 247 (451)
T COG0541 247 T 247 (451)
T ss_pred E
Confidence 4
No 284
>PF03283 PAE: Pectinacetylesterase
Probab=33.64 E-value=1e+02 Score=28.83 Aligned_cols=43 Identities=23% Similarity=0.373 Sum_probs=26.4
Q ss_pred HHHH-cCCCCcEEEEEeChhHHHHHHHH----HhCCccccEEEEEccc
Q 021765 156 YLEN-LLEDEKVILVGHSSGGACVSYAL----EHFPQKISKAIFLCAT 198 (308)
Q Consensus 156 ~l~~-l~~~~~v~lvGhS~GG~~a~~~a----~~~p~~v~~lVli~~~ 198 (308)
++.. +...++|+|.|.|.||.-+...+ ..+|..++-.++.++.
T Consensus 147 l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG 194 (361)
T PF03283_consen 147 LLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSG 194 (361)
T ss_pred HHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccc
Confidence 3343 44345899999999999776543 4466544444444443
No 285
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=33.01 E-value=2.6e+02 Score=22.87 Aligned_cols=102 Identities=17% Similarity=0.247 Sum_probs=49.3
Q ss_pred eEEEEeCCCCCChhHHHHHHHHHHHC--CCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeCh
Q 021765 96 KKFVLIHGEGFGAWCWYKTVASLEEV--GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSS 173 (308)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~--G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~ 173 (308)
..|.|+-| +...-....+.|.++ |..++....+-+ -.+..+.+.+.++..+. +++++|-..
T Consensus 49 ~~ifllG~---~~~~~~~~~~~l~~~yP~l~ivg~~~g~f------------~~~~~~~i~~~I~~~~p--div~vglG~ 111 (172)
T PF03808_consen 49 KRIFLLGG---SEEVLEKAAANLRRRYPGLRIVGYHHGYF------------DEEEEEAIINRINASGP--DIVFVGLGA 111 (172)
T ss_pred CeEEEEeC---CHHHHHHHHHHHHHHCCCeEEEEecCCCC------------ChhhHHHHHHHHHHcCC--CEEEEECCC
Confidence 45666544 344555666677665 345554433211 12334455556666554 699998544
Q ss_pred hHHHHHHHHHhCCccccEEEEEccccCCCCCChhhhhHhhhcchHHHHH
Q 021765 174 GGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQ 222 (308)
Q Consensus 174 GG~~a~~~a~~~p~~v~~lVli~~~~~~~g~~~~~~~~~~~~~~~~~~~ 222 (308)
... -.++..+-+++..-|.++.. ..++.+.......+.+++
T Consensus 112 PkQ--E~~~~~~~~~l~~~v~i~vG------~~~d~~aG~~~raP~w~~ 152 (172)
T PF03808_consen 112 PKQ--ERWIARHRQRLPAGVIIGVG------GAFDFLAGKVKRAPKWMR 152 (172)
T ss_pred CHH--HHHHHHHHHHCCCCEEEEEC------chhhhhccCcCccCHHHH
Confidence 433 33333333333332333322 234555555555555554
No 286
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=32.60 E-value=4.4e+02 Score=25.35 Aligned_cols=71 Identities=17% Similarity=0.215 Sum_probs=43.4
Q ss_pred HHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhCCc--cccEE
Q 021765 115 VASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQ--KISKA 192 (308)
Q Consensus 115 ~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p~--~v~~l 192 (308)
++.+.+.+|.++.+|-+|.-. .-....+.+..+.+..... .+++|--++-|.-+...+..+.+ .+.++
T Consensus 175 l~~~~~~~~DvViIDTaGr~~---------~d~~lm~El~~i~~~~~p~-e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~ 244 (429)
T TIGR01425 175 VEKFKKENFDIIIVDTSGRHK---------QEDSLFEEMLQVAEAIQPD-NIIFVMDGSIGQAAEAQAKAFKDSVDVGSV 244 (429)
T ss_pred HHHHHhCCCCEEEEECCCCCc---------chHHHHHHHHHHhhhcCCc-EEEEEeccccChhHHHHHHHHHhccCCcEE
Confidence 344555689999999987431 2234455555555555544 67777777777666555555432 46677
Q ss_pred EEE
Q 021765 193 IFL 195 (308)
Q Consensus 193 Vli 195 (308)
|+-
T Consensus 245 IlT 247 (429)
T TIGR01425 245 IIT 247 (429)
T ss_pred EEE
Confidence 664
No 287
>PRK10279 hypothetical protein; Provisional
Probab=32.33 E-value=64 Score=29.34 Aligned_cols=32 Identities=16% Similarity=0.073 Sum_probs=24.3
Q ss_pred HHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhC
Q 021765 153 LLDYLENLLEDEKVILVGHSSGGACVSYALEHF 185 (308)
Q Consensus 153 l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~ 185 (308)
+.+.++..+.. .-.++|-|+|+.++..++...
T Consensus 23 VL~aL~E~gi~-~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 23 VINALKKVGIE-IDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHcCCC-cCEEEEEcHHHHHHHHHHcCC
Confidence 44555666665 678999999999998888654
No 288
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=31.85 E-value=72 Score=26.39 Aligned_cols=32 Identities=22% Similarity=0.142 Sum_probs=23.1
Q ss_pred HHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhC
Q 021765 153 LLDYLENLLEDEKVILVGHSSGGACVSYALEHF 185 (308)
Q Consensus 153 l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~ 185 (308)
+.+.++..+.. .-.++|-|.|+.++..++..+
T Consensus 17 vl~~L~e~~~~-~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 17 ALKALEEAGIL-KKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHcCCC-cceEEEECHHHHHHHHHHcCC
Confidence 34444555554 568999999999998888754
No 289
>PRK14974 cell division protein FtsY; Provisional
Probab=31.82 E-value=3.8e+02 Score=24.78 Aligned_cols=69 Identities=22% Similarity=0.184 Sum_probs=42.0
Q ss_pred HHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhCC--ccccEEEE
Q 021765 117 SLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFP--QKISKAIF 194 (308)
Q Consensus 117 ~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p--~~v~~lVl 194 (308)
.....|+.++.+|-+|... .-......+..+.+..... .+++|.-+.-|.-+...+..+. -.+.++|+
T Consensus 217 ~~~~~~~DvVLIDTaGr~~---------~~~~lm~eL~~i~~~~~pd-~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIl 286 (336)
T PRK14974 217 HAKARGIDVVLIDTAGRMH---------TDANLMDELKKIVRVTKPD-LVIFVGDALAGNDAVEQAREFNEAVGIDGVIL 286 (336)
T ss_pred HHHhCCCCEEEEECCCccC---------CcHHHHHHHHHHHHhhCCc-eEEEeeccccchhHHHHHHHHHhcCCCCEEEE
Confidence 3345678999999887542 2234445555555555554 6677777766765555555432 35777777
Q ss_pred E
Q 021765 195 L 195 (308)
Q Consensus 195 i 195 (308)
-
T Consensus 287 T 287 (336)
T PRK14974 287 T 287 (336)
T ss_pred e
Confidence 5
No 290
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=31.50 E-value=71 Score=26.21 Aligned_cols=35 Identities=14% Similarity=0.105 Sum_probs=27.2
Q ss_pred CceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEe
Q 021765 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTAL 128 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~ 128 (308)
..+.|+++-|-+.+..+=.-.+++|.++|+.|.++
T Consensus 24 ~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v~ 58 (169)
T PF03853_consen 24 KGPRVLILCGPGNNGGDGLVAARHLANRGYNVTVY 58 (169)
T ss_dssp TT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEEE
Confidence 45678888888888777778889999999998884
No 291
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=30.81 E-value=3.8e+02 Score=23.74 Aligned_cols=35 Identities=17% Similarity=0.144 Sum_probs=23.1
Q ss_pred EEEeCCC--CCChhHHHHHHHHHHHCCCeEEEeCCCC
Q 021765 98 FVLIHGE--GFGAWCWYKTVASLEEVGLIPTALDLKG 132 (308)
Q Consensus 98 vvllHG~--~~~~~~~~~~~~~L~~~G~~vi~~D~~G 132 (308)
+++++|. |+.......+++.|.++|+.|..+...+
T Consensus 3 l~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 3 LYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred EEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 4455654 3334455678899998899888775443
No 292
>TIGR00824 EIIA-man PTS system, mannose/fructose/sorbose family, IIA component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Man family is unique in several respects among PTS permease families It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the IIA components.
Probab=30.78 E-value=2.4e+02 Score=21.43 Aligned_cols=74 Identities=16% Similarity=0.101 Sum_probs=49.9
Q ss_pred EEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhHH
Q 021765 97 KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGA 176 (308)
Q Consensus 97 ~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG~ 176 (308)
.||.-||- -+......++.+....-.|.++++. ...+.+++.+.+.+.++.++.++.++++.-=+||.
T Consensus 4 ili~sHG~--~A~gl~~s~~~i~G~~~~i~~i~~~----------~~~~~~~~~~~l~~~i~~~~~~~~vivltDl~GGS 71 (116)
T TIGR00824 4 IIISGHGQ--AAIALLKSAEMIFGEQNNVGAVPFV----------PGENAETLQEKYNAALADLDTEEEVLFLVDIFGGS 71 (116)
T ss_pred EEEEecHH--HHHHHHHHHHHHcCCcCCeEEEEcC----------CCcCHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCC
Confidence 57788985 3344445555554333457777764 23478888888999999886655888888888888
Q ss_pred HHHHHH
Q 021765 177 CVSYAL 182 (308)
Q Consensus 177 ~a~~~a 182 (308)
..-.++
T Consensus 72 p~n~a~ 77 (116)
T TIGR00824 72 PYNAAA 77 (116)
T ss_pred HHHHHH
Confidence 654333
No 293
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=30.60 E-value=75 Score=28.42 Aligned_cols=32 Identities=19% Similarity=0.034 Sum_probs=24.3
Q ss_pred HHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHh
Q 021765 152 PLLDYLENLLEDEKVILVGHSSGGACVSYALEH 184 (308)
Q Consensus 152 ~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~ 184 (308)
-+.+.+++.++. .=.++|-|+|+.++..++..
T Consensus 27 GVL~aLeE~gi~-~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 27 GILQALEEAGIP-IDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHHcCCC-ccEEEEECHHHHHHHHHHcC
Confidence 345556666665 55888999999999888875
No 294
>COG0337 AroB 3-dehydroquinate synthetase [Amino acid transport and metabolism]
Probab=29.55 E-value=3.6e+02 Score=25.25 Aligned_cols=71 Identities=24% Similarity=0.301 Sum_probs=43.1
Q ss_pred eEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhH
Q 021765 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (308)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG 175 (308)
..+++++--.-.......+...|.+.|+.+..+..|.=. ...++ +....+.+.+-..+.+.+-.+|| +||
T Consensus 34 ~k~~ivtd~~v~~~y~~~~~~~l~~~g~~v~~~~lp~GE-------~~Ksl-~~~~~i~~~ll~~~~~R~s~iia--lGG 103 (360)
T COG0337 34 RKVAIVTDETVAPLYLEKLLATLEAAGVEVDSIVLPDGE-------EYKSL-ETLEKIYDALLEAGLDRKSTLIA--LGG 103 (360)
T ss_pred CeEEEEECchhHHHHHHHHHHHHHhcCCeeeEEEeCCCc-------ccccH-HHHHHHHHHHHHcCCCCCcEEEE--ECC
Confidence 366666665544555567888999999998777666321 22355 44455555555555554556665 444
Q ss_pred H
Q 021765 176 A 176 (308)
Q Consensus 176 ~ 176 (308)
.
T Consensus 104 G 104 (360)
T COG0337 104 G 104 (360)
T ss_pred h
Confidence 4
No 295
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=28.88 E-value=3.3e+02 Score=23.09 Aligned_cols=86 Identities=20% Similarity=0.191 Sum_probs=47.4
Q ss_pred CCceEEEEeCCCCCChhHH-HHHHHHHHHC-CCeEEEeCCCCCCCC-C---CCCC----CcCCHHHHHHH-----HHHHH
Q 021765 93 IQYKKFVLIHGEGFGAWCW-YKTVASLEEV-GLIPTALDLKGSGID-L---SDTN----SVTTLAEYSKP-----LLDYL 157 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~-~~~~~~L~~~-G~~vi~~D~~G~G~S-~---~~~~----~~~~~~~~~~~-----l~~~l 157 (308)
+..+.|++++=.......| ..+.+.+.+. |+.+..++... ... . .... ..-+.....+. +.+.+
T Consensus 29 ~~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~-~~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~~l~~~l 107 (212)
T cd03146 29 KARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFD-TEDPLDALLEADVIYVGGGNTFNLLAQWREHGLDAIL 107 (212)
T ss_pred cCCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccC-cccHHHHHhcCCEEEECCchHHHHHHHHHHcCHHHHH
Confidence 3456788888776654443 4566778888 99888877543 000 0 0000 01122222222 22333
Q ss_pred HHcCCCCcEEEEEeChhHHHHHH
Q 021765 158 ENLLEDEKVILVGHSSGGACVSY 180 (308)
Q Consensus 158 ~~l~~~~~v~lvGhS~GG~~a~~ 180 (308)
+..-.. ...++|-|.|..+...
T Consensus 108 ~~~~~~-g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 108 KAALER-GVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHHHHC-CCEEEEECHhHHhhCC
Confidence 332222 5789999999997765
No 296
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=28.62 E-value=57 Score=28.63 Aligned_cols=18 Identities=33% Similarity=0.610 Sum_probs=13.9
Q ss_pred CcEEEEEeChhHHHHHHH
Q 021765 164 EKVILVGHSSGGACVSYA 181 (308)
Q Consensus 164 ~~v~lvGhS~GG~~a~~~ 181 (308)
..|+++|||+|..=..++
T Consensus 235 ~~I~i~GhSl~~~D~~Yf 252 (270)
T PF14253_consen 235 DEIIIYGHSLGEVDYPYF 252 (270)
T ss_pred CEEEEEeCCCchhhHHHH
Confidence 489999999998744433
No 297
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=28.47 E-value=97 Score=26.66 Aligned_cols=32 Identities=16% Similarity=0.129 Sum_probs=22.8
Q ss_pred HHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhC
Q 021765 153 LLDYLENLLEDEKVILVGHSSGGACVSYALEHF 185 (308)
Q Consensus 153 l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~ 185 (308)
+.+.++..+.. .-.++|-|.|+.++..++...
T Consensus 18 vL~aL~e~gi~-~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 18 FLAALLEMGLE-PSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHHcCCC-ceEEEEeCHHHHHHHHHHcCC
Confidence 33444444554 557999999999999888654
No 298
>TIGR03586 PseI pseudaminic acid synthase.
Probab=28.44 E-value=3.7e+02 Score=24.79 Aligned_cols=80 Identities=16% Similarity=0.029 Sum_probs=49.3
Q ss_pred CCceEEEEeCCCCCChhHHHHHHHHHHHCCC-eEEEeCCCCCCCCCCCCC-CcCCHHHHHHHHHHHHHH-cCCCCcEEEE
Q 021765 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGL-IPTALDLKGSGIDLSDTN-SVTTLAEYSKPLLDYLEN-LLEDEKVILV 169 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~-~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l~~-l~~~~~v~lv 169 (308)
..+.||++--|. .+...|...++.+.+.|. .|+.... .|..+.. ...++ ..+ ..++. .+. +|.+.
T Consensus 132 ~~gkPvilstG~-~t~~Ei~~Av~~i~~~g~~~i~LlhC----~s~YP~~~~~~nL----~~i-~~lk~~f~~--pVG~S 199 (327)
T TIGR03586 132 KTGKPIIMSTGI-ATLEEIQEAVEACREAGCKDLVLLKC----TSSYPAPLEDANL----RTI-PDLAERFNV--PVGLS 199 (327)
T ss_pred hcCCcEEEECCC-CCHHHHHHHHHHHHHCCCCcEEEEec----CCCCCCCcccCCH----HHH-HHHHHHhCC--CEEee
Confidence 346788899998 588899999999988887 4655542 2332221 11122 222 23333 332 78789
Q ss_pred EeChhHHHHHHHHHh
Q 021765 170 GHSSGGACVSYALEH 184 (308)
Q Consensus 170 GhS~GG~~a~~~a~~ 184 (308)
.|+.|-.++..+...
T Consensus 200 DHt~G~~~~~aAva~ 214 (327)
T TIGR03586 200 DHTLGILAPVAAVAL 214 (327)
T ss_pred CCCCchHHHHHHHHc
Confidence 999997666555554
No 299
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=28.05 E-value=2.5e+02 Score=24.66 Aligned_cols=90 Identities=16% Similarity=0.174 Sum_probs=49.7
Q ss_pred HHHHHHHHCCCeEEEeCCCCCCCCCCCC-CCcCCHHHHHHHHHHHHHHcCCC-CcEEEEEeChhHH----HHHHHHHhCC
Q 021765 113 KTVASLEEVGLIPTALDLKGSGIDLSDT-NSVTTLAEYSKPLLDYLENLLED-EKVILVGHSSGGA----CVSYALEHFP 186 (308)
Q Consensus 113 ~~~~~L~~~G~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~l~~~l~~l~~~-~~v~lvGhS~GG~----~a~~~a~~~p 186 (308)
..++.|.+.+..|+..|+-|-...-..- .-..+.+++.+.+. .+.+.+.. -+-+.+|-+.|+. -|..+...++
T Consensus 101 ~~~eklk~~~vdvvsLDfvgDn~vIk~vy~l~ksv~dyl~~l~-~L~e~~irvvpHitiGL~~gki~~e~kaIdiL~~~~ 179 (275)
T COG1856 101 SDLEKLKEELVDVVSLDFVGDNDVIKRVYKLPKSVEDYLRSLL-LLKENGIRVVPHITIGLDFGKIHGEFKAIDILVNYE 179 (275)
T ss_pred HHHHHHHHhcCcEEEEeecCChHHHHHHHcCCccHHHHHHHHH-HHHHcCceeceeEEEEeccCcccchHHHHHHHhcCC
Confidence 3445566667889999987643211000 01234556655443 34444432 2668899999997 4455555444
Q ss_pred ccccEEEEEccccCCCCCCh
Q 021765 187 QKISKAIFLCATMVSDGQRP 206 (308)
Q Consensus 187 ~~v~~lVli~~~~~~~g~~~ 206 (308)
.+.+|+ ...+|.+|..+
T Consensus 180 --~DalVl-~vliPtpGtkm 196 (275)
T COG1856 180 --PDALVL-VVLIPTPGTKM 196 (275)
T ss_pred --CCeEEE-EEEecCCchhc
Confidence 444444 34556666433
No 300
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=28.01 E-value=2.1e+02 Score=28.87 Aligned_cols=61 Identities=20% Similarity=0.198 Sum_probs=38.9
Q ss_pred CceEEEEeCCCCCChh---HHHHHHHHHHHCCCeEEEeCCCC--CCCCCCCCCCcCCHHHHHHHHHHHHHH
Q 021765 94 QYKKFVLIHGEGFGAW---CWYKTVASLEEVGLIPTALDLKG--SGIDLSDTNSVTTLAEYSKPLLDYLEN 159 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~---~~~~~~~~L~~~G~~vi~~D~~G--~G~S~~~~~~~~~~~~~~~~l~~~l~~ 159 (308)
-+.+++++||.....- .-..+.+.|..+|..|-.+-+|+ |+.+. .....+..+.+.++++.
T Consensus 550 i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~-----~~~~~~~~~~~~~~~~~ 615 (620)
T COG1506 550 IKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR-----PENRVKVLKEILDWFKR 615 (620)
T ss_pred cCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC-----chhHHHHHHHHHHHHHH
Confidence 3568999999876533 34567888888898887777775 54433 12344455555555543
No 301
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=27.99 E-value=4.1e+02 Score=23.18 Aligned_cols=87 Identities=16% Similarity=0.169 Sum_probs=46.1
Q ss_pred CceEEEEeCCCCC--ChhHH-HHHHHHHHHCCCeEEEeCCCCCCC---CCCCC--CCcCCHHHHHH-----HHHHHHHHc
Q 021765 94 QYKKFVLIHGEGF--GAWCW-YKTVASLEEVGLIPTALDLKGSGI---DLSDT--NSVTTLAEYSK-----PLLDYLENL 160 (308)
Q Consensus 94 ~~~~vvllHG~~~--~~~~~-~~~~~~L~~~G~~vi~~D~~G~G~---S~~~~--~~~~~~~~~~~-----~l~~~l~~l 160 (308)
.+|.|+|++=... ....| ..+.+.+.+.|+.|..++...--. ...+. -..-+...+.+ .+.+.++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~ 109 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRVADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREA 109 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccchhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHH
Confidence 4578999987663 33443 356677888899988887652100 00000 00011111111 122333322
Q ss_pred CCCCcEEEEEeChhHHHHHHH
Q 021765 161 LEDEKVILVGHSSGGACVSYA 181 (308)
Q Consensus 161 ~~~~~v~lvGhS~GG~~a~~~ 181 (308)
-.. ...++|.|.|+.++..-
T Consensus 110 ~~~-G~~~~G~SAGAii~~~~ 129 (233)
T PRK05282 110 VKN-GTPYIGWSAGANVAGPT 129 (233)
T ss_pred HHC-CCEEEEECHHHHhhhcc
Confidence 122 57899999999876543
No 302
>PRK14456 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=27.91 E-value=3.5e+02 Score=25.37 Aligned_cols=74 Identities=12% Similarity=-0.043 Sum_probs=46.1
Q ss_pred EEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhHHH
Q 021765 98 FVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGAC 177 (308)
Q Consensus 98 vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG~~ 177 (308)
.+++.|...+.+....+++.+......|-.+.+--.+.+.... ...+.++.+.+.++..+.. +.+..|.|.=+
T Consensus 283 yvLI~GvNDs~eda~~L~~~l~~~~~~VnlIpyn~~~~~~~~~----ps~e~i~~F~~~L~~~Gi~---vtvR~~~G~di 355 (368)
T PRK14456 283 YMLLEGINDSPEDARKLIRFASRFFCKINLIDYNSIVNIKFEP----VCSSTRERFRDRLLDAGLQ---VTVRKSYGTTI 355 (368)
T ss_pred EEEEcCCCCCHHHHHHHHHHHhcCCCeeEEeeeccCCCCCCCC----CCHHHHHHHHHHHHHCCCc---EEeeCCCCcch
Confidence 5889999999888888888887654444333332233322211 2344456666777776654 67788888654
Q ss_pred H
Q 021765 178 V 178 (308)
Q Consensus 178 a 178 (308)
.
T Consensus 356 ~ 356 (368)
T PRK14456 356 N 356 (368)
T ss_pred h
Confidence 3
No 303
>PRK00553 ribose-phosphate pyrophosphokinase; Provisional
Probab=27.86 E-value=4.4e+02 Score=24.31 Aligned_cols=20 Identities=20% Similarity=0.373 Sum_probs=13.5
Q ss_pred CcEEEEEeChhHH-HHHHHHH
Q 021765 164 EKVILVGHSSGGA-CVSYALE 183 (308)
Q Consensus 164 ~~v~lvGhS~GG~-~a~~~a~ 183 (308)
++++++|-..||. .+..++.
T Consensus 168 ~~~vvVsPD~gg~~rA~~lA~ 188 (332)
T PRK00553 168 KDLVVVSPDYGGVKRARLIAE 188 (332)
T ss_pred CCeEEEEECCCcHHHHHHHHH
Confidence 3788888888888 3444444
No 304
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=26.60 E-value=3.2e+02 Score=26.87 Aligned_cols=72 Identities=18% Similarity=0.139 Sum_probs=44.2
Q ss_pred CCCCCChhHHH-HHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhHHHHHH
Q 021765 102 HGEGFGAWCWY-KTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSY 180 (308)
Q Consensus 102 HG~~~~~~~~~-~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG~~a~~ 180 (308)
-|++.+...-. .-+++-..+||.|+.+|-.|.-. +-......+..+++....+ .|+.||.-+=|.-+..
T Consensus 445 kGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~---------~~~~lm~~l~k~~~~~~pd-~i~~vgealvg~dsv~ 514 (587)
T KOG0781|consen 445 KGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMH---------NNAPLMTSLAKLIKVNKPD-LILFVGEALVGNDSVD 514 (587)
T ss_pred hhcCCChHHHHHHHHHHHHhcCCCEEEEecccccc---------CChhHHHHHHHHHhcCCCc-eEEEehhhhhCcHHHH
Confidence 45555543322 34556667799999999876431 2223344555666655555 8999998887775554
Q ss_pred HHH
Q 021765 181 ALE 183 (308)
Q Consensus 181 ~a~ 183 (308)
-+.
T Consensus 515 q~~ 517 (587)
T KOG0781|consen 515 QLK 517 (587)
T ss_pred HHH
Confidence 443
No 305
>PTZ00445 p36-lilke protein; Provisional
Probab=26.46 E-value=2.3e+02 Score=24.49 Aligned_cols=25 Identities=28% Similarity=0.097 Sum_probs=20.0
Q ss_pred hhHHHHHHHHHHHCCCeEEEeCCCC
Q 021765 108 AWCWYKTVASLEEVGLIPTALDLKG 132 (308)
Q Consensus 108 ~~~~~~~~~~L~~~G~~vi~~D~~G 132 (308)
.+.-..+.+.|.+.|.++++.|+--
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~Dn 52 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDL 52 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchh
Confidence 3445678889999999999999853
No 306
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=26.26 E-value=98 Score=26.39 Aligned_cols=33 Identities=21% Similarity=0.139 Sum_probs=24.4
Q ss_pred HHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhCC
Q 021765 153 LLDYLENLLEDEKVILVGHSSGGACVSYALEHFP 186 (308)
Q Consensus 153 l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p 186 (308)
+.+.+.+.+.. .-.++|-|.|+.++..++...+
T Consensus 16 vl~aL~e~g~~-~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIE-PDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCC-CCEEEEECHHHHHHHHHHcCCc
Confidence 34445555554 5689999999999999988764
No 307
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=26.25 E-value=4.7e+02 Score=23.64 Aligned_cols=35 Identities=14% Similarity=0.016 Sum_probs=25.5
Q ss_pred EEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCC
Q 021765 97 KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLK 131 (308)
Q Consensus 97 ~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~ 131 (308)
.++...|.++....+..+++.|.+.||.|..+-..
T Consensus 4 i~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~ 38 (357)
T PRK00726 4 ILLAGGGTGGHVFPALALAEELKKRGWEVLYLGTA 38 (357)
T ss_pred EEEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECC
Confidence 44555677766666678999999999998876443
No 308
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=26.18 E-value=75 Score=31.52 Aligned_cols=30 Identities=20% Similarity=0.248 Sum_probs=22.7
Q ss_pred HHH-HHcCCCCcEEEEEeChhHHHHHHHHHhC
Q 021765 155 DYL-ENLLEDEKVILVGHSSGGACVSYALEHF 185 (308)
Q Consensus 155 ~~l-~~l~~~~~v~lvGhS~GG~~a~~~a~~~ 185 (308)
+++ +..+.. +-.++|||+|=+.++.++--.
T Consensus 256 ~ll~~~~GI~-Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 256 QLLCDEFAIK-PDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHhcCCC-CCEEeecCHHHHHHHHHhCCC
Confidence 444 456676 789999999999888777644
No 309
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=26.03 E-value=2.5e+02 Score=22.97 Aligned_cols=58 Identities=12% Similarity=0.122 Sum_probs=38.5
Q ss_pred CCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCC------CcCCHHHHHHHHHHHHHHcCC
Q 021765 105 GFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN------SVTTLAEYSKPLLDYLENLLE 162 (308)
Q Consensus 105 ~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~l~~~l~~l~~ 162 (308)
.-+...|......+.+.|++.+.+..-|++....-+. ......+.++.+.+..+..+.
T Consensus 16 ~~~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gm 79 (166)
T PF14488_consen 16 NWTPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGM 79 (166)
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCC
Confidence 3456789999999999999988888777665432111 112334566666666666665
No 310
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=25.87 E-value=4.8e+02 Score=23.28 Aligned_cols=72 Identities=14% Similarity=0.197 Sum_probs=42.0
Q ss_pred HHHHHHH-CCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEE-EeChhHHHHHHHHHhC-Ccccc
Q 021765 114 TVASLEE-VGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILV-GHSSGGACVSYALEHF-PQKIS 190 (308)
Q Consensus 114 ~~~~L~~-~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lv-GhS~GG~~a~~~a~~~-p~~v~ 190 (308)
.++.+.+ .++.++.+|-+|.... -.+..+.+.++++..... .+++| .-++++.-+...+..+ .-.+.
T Consensus 145 ~l~~l~~~~~~D~ViIDt~Gr~~~---------~~~~l~el~~~~~~~~~~-~~~LVl~a~~~~~d~~~~~~~f~~~~~~ 214 (270)
T PRK06731 145 ALTYFKEEARVDYILIDTAGKNYR---------ASETVEEMIETMGQVEPD-YICLTLSASMKSKDMIEIITNFKDIHID 214 (270)
T ss_pred HHHHHHhcCCCCEEEEECCCCCcC---------CHHHHHHHHHHHhhhCCC-eEEEEEcCccCHHHHHHHHHHhCCCCCC
Confidence 3344443 3689999999886421 123444555566555444 44544 4456776666666654 34577
Q ss_pred EEEEE
Q 021765 191 KAIFL 195 (308)
Q Consensus 191 ~lVli 195 (308)
++|+-
T Consensus 215 ~~I~T 219 (270)
T PRK06731 215 GIVFT 219 (270)
T ss_pred EEEEE
Confidence 77774
No 311
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=25.43 E-value=4.8e+02 Score=23.11 Aligned_cols=101 Identities=14% Similarity=0.050 Sum_probs=56.6
Q ss_pred CCceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEE-EEe
Q 021765 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVIL-VGH 171 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~l-vGh 171 (308)
..+.+|++--|...+.+.|...++++.+.|-.=+.+=.||. +..+......++ ...+..+-+..+. +|++ ..|
T Consensus 120 ~tgkPVilk~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~--~~Y~~~~~n~~d--l~ai~~lk~~~~l--PVivd~SH 193 (250)
T PRK13397 120 HIDKPILFKRGLMATIEEYLGALSYLQDTGKSNIILCERGV--RGYDVETRNMLD--IMAVPIIQQKTDL--PIIVDVSH 193 (250)
T ss_pred ccCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEcccc--CCCCCccccccC--HHHHHHHHHHhCC--CeEECCCC
Confidence 44679999999999999999999999988874344444554 322221111111 1122222222343 5555 568
Q ss_pred ChhH-----HHHHHHHHhCCccccEEEEEccccCCC
Q 021765 172 SSGG-----ACVSYALEHFPQKISKAIFLCATMVSD 202 (308)
Q Consensus 172 S~GG-----~~a~~~a~~~p~~v~~lVli~~~~~~~ 202 (308)
|.|- .++..+.+. ..+++++---+-|..
T Consensus 194 s~G~r~~v~~~a~AAvA~---GAdGl~IE~H~~P~~ 226 (250)
T PRK13397 194 STGRRDLLLPAAKIAKAV---GANGIMMEVHPDPDH 226 (250)
T ss_pred CCcccchHHHHHHHHHHh---CCCEEEEEecCCccc
Confidence 8774 344333332 267777665444443
No 312
>COG0218 Predicted GTPase [General function prediction only]
Probab=25.35 E-value=91 Score=26.60 Aligned_cols=31 Identities=26% Similarity=0.378 Sum_probs=17.1
Q ss_pred EEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHH
Q 021765 125 PTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLE 158 (308)
Q Consensus 125 vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~ 158 (308)
...+|+||+|....+. ...+.|.+.+.++++
T Consensus 72 ~~lVDlPGYGyAkv~k---~~~e~w~~~i~~YL~ 102 (200)
T COG0218 72 LRLVDLPGYGYAKVPK---EVKEKWKKLIEEYLE 102 (200)
T ss_pred EEEEeCCCcccccCCH---HHHHHHHHHHHHHHh
Confidence 5677888888765432 123444444445554
No 313
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=25.13 E-value=80 Score=27.48 Aligned_cols=30 Identities=17% Similarity=0.087 Sum_probs=21.4
Q ss_pred EEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCC
Q 021765 97 KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLK 131 (308)
Q Consensus 97 ~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~ 131 (308)
.-||++|-|-+.+. ..|+++||.|+.+|+-
T Consensus 45 ~rvLvPgCGkg~D~-----~~LA~~G~~V~GvDlS 74 (226)
T PRK13256 45 SVCLIPMCGCSIDM-----LFFLSKGVKVIGIELS 74 (226)
T ss_pred CeEEEeCCCChHHH-----HHHHhCCCcEEEEecC
Confidence 35677776655442 3578899999999974
No 314
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=25.01 E-value=1.1e+02 Score=25.00 Aligned_cols=31 Identities=19% Similarity=0.045 Sum_probs=22.5
Q ss_pred HHHHHcCCCCcEEEEEeChhHHHHHHHHHhCC
Q 021765 155 DYLENLLEDEKVILVGHSSGGACVSYALEHFP 186 (308)
Q Consensus 155 ~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p 186 (308)
+.+++.+.. .-.++|-|.|+.++..++....
T Consensus 20 ~~L~e~g~~-~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 20 RALEEEGIE-IDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHCCCC-eeEEEEeCHHHHHHHHHHcCCC
Confidence 344444554 5688999999999988887643
No 315
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=24.66 E-value=5.8e+02 Score=23.79 Aligned_cols=93 Identities=15% Similarity=0.055 Sum_probs=51.4
Q ss_pred CCCceEEEEeCCCCCC----h-hHHHHHHHHHHH-CCCeEEEeCCCCCCCCCCCCC---------------CcCCHHHHH
Q 021765 92 NIQYKKFVLIHGEGFG----A-WCWYKTVASLEE-VGLIPTALDLKGSGIDLSDTN---------------SVTTLAEYS 150 (308)
Q Consensus 92 ~~~~~~vvllHG~~~~----~-~~~~~~~~~L~~-~G~~vi~~D~~G~G~S~~~~~---------------~~~~~~~~~ 150 (308)
+..+..|+++-|-... . ..--.+...|.. .+-+++++=-+|.|.-..+.. -...+...+
T Consensus 28 ds~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI 107 (423)
T COG3673 28 DSMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNI 107 (423)
T ss_pred cCcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHH
Confidence 3445678888885432 1 223345555554 467777776788875321110 001122222
Q ss_pred HHHHHHH-HHcCCCCcEEEEEeChhHHHHHHHHHh
Q 021765 151 KPLLDYL-ENLLEDEKVILVGHSSGGACVSYALEH 184 (308)
Q Consensus 151 ~~l~~~l-~~l~~~~~v~lvGhS~GG~~a~~~a~~ 184 (308)
.....++ .+...+..|.++|+|-|+.++.-+|..
T Consensus 108 ~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 108 REAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 2222233 333444589999999999998777653
No 316
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=24.63 E-value=1.1e+02 Score=26.31 Aligned_cols=30 Identities=33% Similarity=0.234 Sum_probs=23.5
Q ss_pred eEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCC
Q 021765 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDL 130 (308)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~ 130 (308)
+.-||++|-|-+.+. ..|+++||.|+.+|+
T Consensus 38 ~~rvLvPgCG~g~D~-----~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 38 GGRVLVPGCGKGYDM-----LWLAEQGHDVVGVDL 67 (218)
T ss_dssp SEEEEETTTTTSCHH-----HHHHHTTEEEEEEES
T ss_pred CCeEEEeCCCChHHH-----HHHHHCCCeEEEEec
Confidence 456888998877653 457888999999997
No 317
>PRK03092 ribose-phosphate pyrophosphokinase; Provisional
Probab=24.15 E-value=5.5e+02 Score=23.34 Aligned_cols=58 Identities=10% Similarity=0.076 Sum_probs=27.5
Q ss_pred ccCCeeeEEEecCCCceEEEEeCCCCCC--hhHHH--HHHHHHHHCCCeEEEeCCCCCCCCC
Q 021765 80 LSNGKQDTNILENIQYKKFVLIHGEGFG--AWCWY--KTVASLEEVGLIPTALDLKGSGIDL 137 (308)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~vvllHG~~~~--~~~~~--~~~~~L~~~G~~vi~~D~~G~G~S~ 137 (308)
+.+|.......++-.+..|++++....+ ....+ -++..+.+.|-+-+..-.|-+|.+.
T Consensus 21 F~DGE~~vri~~~v~g~~v~ii~s~~~p~nd~l~ell~~~~a~r~~~a~~i~~ViPYl~YaR 82 (304)
T PRK03092 21 FANGEIYVRFEESVRGCDAFVLQSHTAPINKWLMEQLIMIDALKRASAKRITVVLPFYPYAR 82 (304)
T ss_pred CCCCCEEEEECCCCCCCEEEEEeCCCCCCcHHHHHHHHHHHHHHHcCCCeEEEEEecccccc
Confidence 3444333333333344556667765443 22222 3456676666544444445444443
No 318
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=23.92 E-value=35 Score=29.73 Aligned_cols=69 Identities=13% Similarity=0.069 Sum_probs=40.6
Q ss_pred ceEEEEeCCCCCChhH--HHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHH-HHHHHHHHcCCCCcEEEEEe
Q 021765 95 YKKFVLIHGEGFGAWC--WYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSK-PLLDYLENLLEDEKVILVGH 171 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~-~l~~~l~~l~~~~~v~lvGh 171 (308)
.|+||++.|+.+++.. -..+...|..+|++|.++.-|. -++... -+-.+-..+...+.+.|+=-
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~pt-------------~eE~~~p~lwRfw~~lP~~G~I~if~r 96 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKPT-------------DEELRRPFLWRFWRALPARGQIGIFDR 96 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS---------------HHHHTS-TTHHHHTTS--TT-EEEEES
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCCC-------------hhHcCCCcHHHHHHhCCCCCEEEEEec
Confidence 4689999999887663 3466677778899999998652 222221 23345556665568888876
Q ss_pred ChhHH
Q 021765 172 SSGGA 176 (308)
Q Consensus 172 S~GG~ 176 (308)
|+=.-
T Consensus 97 SWY~~ 101 (228)
T PF03976_consen 97 SWYED 101 (228)
T ss_dssp -GGGG
T ss_pred chhhH
Confidence 75444
No 319
>TIGR02260 benz_CoA_red_B benzoyl-CoA reductase, bcr type, subunit B. This model describes B, or beta, subunit of the bcr type of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA.
Probab=23.86 E-value=6.2e+02 Score=24.15 Aligned_cols=39 Identities=13% Similarity=0.042 Sum_probs=27.9
Q ss_pred ceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCCCCCC
Q 021765 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSG 134 (308)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G 134 (308)
..+.|++||...... ...+.+.+.+.|..|++-++..++
T Consensus 266 e~~Ril~~G~P~~~~-~~~~~k~~ee~Ga~VV~~~~~~~~ 304 (413)
T TIGR02260 266 EKYRLVVEGPPNWTN-FREFWKLFYDEGAVVVASSYTKVG 304 (413)
T ss_pred cceEEEEECCCcchh-HHHHHHHHHHCCCEEEEEeccccc
Confidence 468999999776554 234555666889999999777543
No 320
>COG0400 Predicted esterase [General function prediction only]
Probab=23.59 E-value=3.7e+02 Score=22.96 Aligned_cols=43 Identities=14% Similarity=-0.026 Sum_probs=32.6
Q ss_pred CCCceEEEEeCCCCCCh---hHHHHHHHHHHHCCCeEEEeCCC-CCC
Q 021765 92 NIQYKKFVLIHGEGFGA---WCWYKTVASLEEVGLIPTALDLK-GSG 134 (308)
Q Consensus 92 ~~~~~~vvllHG~~~~~---~~~~~~~~~L~~~G~~vi~~D~~-G~G 134 (308)
+...++|+++||.-+.. ..-..+.+.|.+.|..|..-++. ||.
T Consensus 143 ~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH~ 189 (207)
T COG0400 143 DLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEGGHE 189 (207)
T ss_pred ccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecCCCc
Confidence 34568999999987653 34457888999999999888875 554
No 321
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=23.50 E-value=2e+02 Score=25.93 Aligned_cols=17 Identities=18% Similarity=0.083 Sum_probs=14.9
Q ss_pred EEEEeChhHHHHHHHHH
Q 021765 167 ILVGHSSGGACVSYALE 183 (308)
Q Consensus 167 ~lvGhS~GG~~a~~~a~ 183 (308)
.+.|-|.||.+|..++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 58899999999988875
No 322
>TIGR00689 rpiB_lacA_lacB sugar-phosphate isomerases, RpiB/LacA/LacB family. Proteins of known function in this family act as sugar (pentose and/or hexose)-phosphate isomerases, including the LacA and LacB subunits of galactose-6-phosphate isomerases from Gram-positive bacteria and RpiB. RpiB is the second ribose phosphate isomerase of E. coli. It lacks homology to RpiA, its inducer is unknown (but is not ribose), and it can be replaced by the homologous galactose-6-phosphate isomerase of Streptococcus mutans, all of which suggests that the ribose phosphate isomerase activity of RpiB is a secondary function. On the other hand, there appear to be a significant number of species which contain rpiB, lack rpiA and seem to require rpi activity in order to copplete the pentose phosphate pathway.
Probab=23.43 E-value=3.9e+02 Score=21.44 Aligned_cols=72 Identities=17% Similarity=0.208 Sum_probs=40.4
Q ss_pred HHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhCCccccEE
Q 021765 113 KTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKA 192 (308)
Q Consensus 113 ~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~l 192 (308)
.+.++|.+.||.|+-+-- + . ....++.+++..+...+..-..+.-|.+.|--.| ...+|.++|. |.+.
T Consensus 15 ~l~~~L~~~g~eV~D~G~--~---~---~~~~dYpd~a~~va~~V~~g~~~~GIliCGtGiG---~siaANK~~G-Iraa 82 (144)
T TIGR00689 15 EIIEHLKQKGHEVIDCGT--L---Y---DERVDYPDYAKLVADKVVAGEVSLGILICGTGIG---MSIAANKFKG-IRAA 82 (144)
T ss_pred HHHHHHHHCCCEEEEcCC--C---C---CCCCChHHHHHHHHHHHHcCCCceEEEEcCCcHH---HHHHHhcCCC-eEEE
Confidence 578899999998864421 1 1 1224688888888777755444323344443333 2334556664 5554
Q ss_pred EEEc
Q 021765 193 IFLC 196 (308)
Q Consensus 193 Vli~ 196 (308)
+..+
T Consensus 83 ~~~d 86 (144)
T TIGR00689 83 LCVD 86 (144)
T ss_pred EECC
Confidence 4444
No 323
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=23.23 E-value=5.3e+02 Score=22.83 Aligned_cols=98 Identities=13% Similarity=0.050 Sum_probs=56.4
Q ss_pred CCceEEEEeCCCCCChhHHHHHHHHHHHCCC-eEEEeCCCCCCCCCC-CC-CCcCCHHHHHHHHHHHHHHcCCCCcEEE-
Q 021765 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGL-IPTALDLKGSGIDLS-DT-NSVTTLAEYSKPLLDYLENLLEDEKVIL- 168 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~-~vi~~D~~G~G~S~~-~~-~~~~~~~~~~~~l~~~l~~l~~~~~v~l- 168 (308)
..+.+|++--|...+.+.|...++.+.+.|- +++... +|. |.. +. ....++.. +..+-+..+. +|.+
T Consensus 130 ~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~-rG~--s~y~~~~~~~~dl~~----i~~lk~~~~~--pV~~d 200 (260)
T TIGR01361 130 KQGKPVLLKRGMGNTIEEWLYAAEYILSSGNGNVILCE-RGI--RTFEKATRNTLDLSA----VPVLKKETHL--PIIVD 200 (260)
T ss_pred cCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEE-CCC--CCCCCCCcCCcCHHH----HHHHHHhhCC--CEEEc
Confidence 3467999999999999999999999988776 455544 333 322 11 11122222 2222222343 7888
Q ss_pred EEeChh-----HHHHHHHHHhCCccccEEEEEccccCCC
Q 021765 169 VGHSSG-----GACVSYALEHFPQKISKAIFLCATMVSD 202 (308)
Q Consensus 169 vGhS~G-----G~~a~~~a~~~p~~v~~lVli~~~~~~~ 202 (308)
..||.| -.++. +|.... ..++++---+.+..
T Consensus 201 s~Hs~G~r~~~~~~~~-aAva~G--a~gl~iE~H~t~d~ 236 (260)
T TIGR01361 201 PSHAAGRRDLVIPLAK-AAIAAG--ADGLMIEVHPDPEK 236 (260)
T ss_pred CCCCCCccchHHHHHH-HHHHcC--CCEEEEEeCCCccc
Confidence 899988 33333 333322 56666654444433
No 324
>PRK06849 hypothetical protein; Provisional
Probab=23.23 E-value=5.9e+02 Score=23.66 Aligned_cols=60 Identities=8% Similarity=-0.004 Sum_probs=39.4
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCC---C------CCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeC
Q 021765 111 WYKTVASLEEVGLIPTALDLKGSGIDL---S------DTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (308)
Q Consensus 111 ~~~~~~~L~~~G~~vi~~D~~G~G~S~---~------~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (308)
-..+++.|.+.|++|++.|......+. . .+....+..++.+.+.++++..+. ++++-+.+
T Consensus 17 ~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~i--d~vIP~~e 85 (389)
T PRK06849 17 ALELARLFHNAGHTVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENI--DLLIPTCE 85 (389)
T ss_pred HHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCC--CEEEECCh
Confidence 346788899999999999876432211 0 011223566788888888888775 46666655
No 325
>PRK02269 ribose-phosphate pyrophosphokinase; Provisional
Probab=23.10 E-value=5.3e+02 Score=23.61 Aligned_cols=78 Identities=14% Similarity=0.072 Sum_probs=38.4
Q ss_pred CCCceEEEEeCCCCCC--hhHHH--HHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEE
Q 021765 92 NIQYKKFVLIHGEGFG--AWCWY--KTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVI 167 (308)
Q Consensus 92 ~~~~~~vvllHG~~~~--~~~~~--~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~ 167 (308)
+-.+..|++++..... ....+ -+++.|...|-+-+..-.|-+|.+..+......-.--++.+..+++..+.+ +++
T Consensus 49 ~vrg~dV~iv~s~~~~~nd~lmelll~~~alr~~~a~~i~~V~PYl~YaRQDr~~~~~e~isak~~a~ll~~~g~d-~vi 127 (320)
T PRK02269 49 SIRGHHVFILQSTSSPVNDNLMEILIMVDALKRASAESINVVMPYYGYARQDRKARSREPITSKLVANMLEVAGVD-RLL 127 (320)
T ss_pred CCCCCEEEEEecCCCCccchHHHHHHHHHHHHHhCCCeEEEEEeccccchhhcccCCCCCchHHHHHHHHhhcCCC-EEE
Confidence 3344567778776543 22222 345677776655444445555555433221111112234455566666655 555
Q ss_pred EEE
Q 021765 168 LVG 170 (308)
Q Consensus 168 lvG 170 (308)
.+-
T Consensus 128 t~D 130 (320)
T PRK02269 128 TVD 130 (320)
T ss_pred EEC
Confidence 443
No 326
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=23.06 E-value=1.6e+02 Score=23.34 Aligned_cols=41 Identities=15% Similarity=0.054 Sum_probs=26.0
Q ss_pred EEEEeCCCCCChhHH--HHHHHHHHHCCCeEEEeCCCCCCCCC
Q 021765 97 KFVLIHGEGFGAWCW--YKTVASLEEVGLIPTALDLKGSGIDL 137 (308)
Q Consensus 97 ~vvllHG~~~~~~~~--~~~~~~L~~~G~~vi~~D~~G~G~S~ 137 (308)
++|.+-|.-++.... ..+++.|.++||+|.++=.-+||...
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~ 43 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFE 43 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcc
Confidence 467777776665543 47899999999999866555665543
No 327
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=22.96 E-value=1.9e+02 Score=25.84 Aligned_cols=38 Identities=16% Similarity=0.097 Sum_probs=23.2
Q ss_pred EEEEeCCCCCChhHH--HHHHHHHHHCCCeEEEeCCCCCC
Q 021765 97 KFVLIHGEGFGAWCW--YKTVASLEEVGLIPTALDLKGSG 134 (308)
Q Consensus 97 ~vvllHG~~~~~~~~--~~~~~~L~~~G~~vi~~D~~G~G 134 (308)
++|++-|+++++... ..+.+.|.+.++.|+.++--..+
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~ 41 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLG 41 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 578888998877643 36777888888999888854444
No 328
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=22.57 E-value=1.8e+02 Score=22.48 Aligned_cols=14 Identities=21% Similarity=0.273 Sum_probs=11.1
Q ss_pred HHHHHHCCCeEEEe
Q 021765 115 VASLEEVGLIPTAL 128 (308)
Q Consensus 115 ~~~L~~~G~~vi~~ 128 (308)
.+.|.+.|++|+.+
T Consensus 100 ~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 100 NSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHCcCEEEEE
Confidence 34688889999876
No 329
>PRK02458 ribose-phosphate pyrophosphokinase; Provisional
Probab=22.45 E-value=5.5e+02 Score=23.59 Aligned_cols=70 Identities=13% Similarity=0.082 Sum_probs=33.5
Q ss_pred CceEEEEeCCCCCC--hhHHH--HHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCC
Q 021765 94 QYKKFVLIHGEGFG--AWCWY--KTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLED 163 (308)
Q Consensus 94 ~~~~vvllHG~~~~--~~~~~--~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~ 163 (308)
.+..|++++..... ....+ -+++.+.+.|-.-+..-.|-++.+..+......-.--++.+..+++..+.+
T Consensus 55 ~g~dV~ii~s~~~~~nd~l~eLll~~~alr~~~a~~i~lViPYl~YaRQDr~~~~ge~isak~~a~lL~~~g~d 128 (323)
T PRK02458 55 RGDDIYIIQSTSFPVNDHLWELLIMIDACKRASANTVNVVLPYFGYARQDRIAKPREPITAKLVANMLVKAGVD 128 (323)
T ss_pred CCCeEEEEecCCCCCchHHHHHHHHHHHHHHcCCceEEEEEeccccchhhcccCCCCCchHHHHHHHHhhcCCC
Confidence 34567777776433 22222 356677777765444445555555432211110011234444556555544
No 330
>PF04763 DUF562: Protein of unknown function (DUF562); InterPro: IPR006850 This represents a conserved region found in a number of Chlamydophila pneumoniae proteins.
Probab=22.30 E-value=3.2e+02 Score=21.82 Aligned_cols=38 Identities=16% Similarity=-0.099 Sum_probs=27.9
Q ss_pred ceEEEEeCCCCCC----hhHHHHHHHHHHHCCC---eEEEeCCCC
Q 021765 95 YKKFVLIHGEGFG----AWCWYKTVASLEEVGL---IPTALDLKG 132 (308)
Q Consensus 95 ~~~vvllHG~~~~----~~~~~~~~~~L~~~G~---~vi~~D~~G 132 (308)
.-+||+.|+.++. ...+..+++.|...|| +++.++..+
T Consensus 17 ~vvVv~~~~~~~~~~l~~~s~~~l~~eL~~~GYSylNIfs~~~~~ 61 (146)
T PF04763_consen 17 NVVVVCNHSWPGPESLPPESVSLLIEELEESGYSYLNIFSCSSES 61 (146)
T ss_pred cEEEEEeCCcccccCCChHHHHHHHHHHhhcCCceEEEEEEcCCC
Confidence 3477888998764 4467789999999998 466666543
No 331
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=21.95 E-value=1.3e+02 Score=25.86 Aligned_cols=37 Identities=16% Similarity=0.194 Sum_probs=22.8
Q ss_pred CCceEEEEeCCCCCChh-----HHHHHHHHHHHCCCeEEEeC
Q 021765 93 IQYKKFVLIHGEGFGAW-----CWYKTVASLEEVGLIPTALD 129 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~-----~~~~~~~~L~~~G~~vi~~D 129 (308)
.+++.|++.+|...... .|..+++.|.+.++.|+.+-
T Consensus 103 ~~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g 144 (247)
T PF01075_consen 103 KDKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLG 144 (247)
T ss_dssp TTSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--
T ss_pred ccCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEc
Confidence 45678888888876433 46778889988887877653
No 332
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=21.88 E-value=3.2e+02 Score=25.09 Aligned_cols=84 Identities=24% Similarity=0.185 Sum_probs=46.7
Q ss_pred HHHHHHHHCCCeEEEeCCCCCCCCCCCCC-----CcCCHHHHHHHHHHHHHHcCCCC-----cEEEEEeCh---------
Q 021765 113 KTVASLEEVGLIPTALDLKGSGIDLSDTN-----SVTTLAEYSKPLLDYLENLLEDE-----KVILVGHSS--------- 173 (308)
Q Consensus 113 ~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~~~l~~~l~~l~~~~-----~v~lvGhS~--------- 173 (308)
.....|.+.||.|+.+|.-..|....-.. ...++.| .+.+.+++++..++. -...||.|+
T Consensus 15 Htv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D-~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~N 93 (329)
T COG1087 15 HTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLD-RALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDN 93 (329)
T ss_pred HHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEecccc-HHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhh
Confidence 45566777899999999876664321111 0112222 234556666655541 234566674
Q ss_pred ---hHHHHHHHHHhCCccccEEEEEcccc
Q 021765 174 ---GGACVSYALEHFPQKISKAIFLCATM 199 (308)
Q Consensus 174 ---GG~~a~~~a~~~p~~v~~lVli~~~~ 199 (308)
|....+.++.++ .|+.+|+-++..
T Consensus 94 Nv~gTl~Ll~am~~~--gv~~~vFSStAa 120 (329)
T COG1087 94 NVVGTLNLIEAMLQT--GVKKFIFSSTAA 120 (329)
T ss_pred chHhHHHHHHHHHHh--CCCEEEEecchh
Confidence 333444555553 489988876553
No 333
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=21.56 E-value=6.3e+02 Score=23.10 Aligned_cols=38 Identities=18% Similarity=0.205 Sum_probs=25.8
Q ss_pred CCceEEEEeCCCCCChh-HH-HHHHHHHHHCCCeEEEeCC
Q 021765 93 IQYKKFVLIHGEGFGAW-CW-YKTVASLEEVGLIPTALDL 130 (308)
Q Consensus 93 ~~~~~vvllHG~~~~~~-~~-~~~~~~L~~~G~~vi~~D~ 130 (308)
...|++|++-|..++.. .| ..+..+|.+.+...+.+++
T Consensus 16 ~~~p~~ilVvGMAGSGKTTF~QrL~~hl~~~~~ppYviNL 55 (366)
T KOG1532|consen 16 IQRPVIILVVGMAGSGKTTFMQRLNSHLHAKKTPPYVINL 55 (366)
T ss_pred ccCCcEEEEEecCCCCchhHHHHHHHHHhhccCCCeEEeC
Confidence 45688888889877755 33 5777888877655555544
No 334
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=21.54 E-value=4.2e+02 Score=21.11 Aligned_cols=62 Identities=15% Similarity=0.146 Sum_probs=41.5
Q ss_pred HHHHHHHCCC-eEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhHH-HHHHHHHhC
Q 021765 114 TVASLEEVGL-IPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGA-CVSYALEHF 185 (308)
Q Consensus 114 ~~~~L~~~G~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG~-~a~~~a~~~ 185 (308)
+.+.|...|. +|+.++.+.. ..++.+.+++.+.++++..+. .++++|++--|. ++..++.+.
T Consensus 50 l~~~l~~~G~d~v~~~~~~~~--------~~~~~~~~a~~l~~~~~~~~~--~lVl~~~t~~g~~la~~lA~~L 113 (164)
T PF01012_consen 50 LRKALAKYGADKVYHIDDPAL--------AEYDPEAYADALAELIKEEGP--DLVLFGSTSFGRDLAPRLAARL 113 (164)
T ss_dssp HHHHHHSTTESEEEEEE-GGG--------TTC-HHHHHHHHHHHHHHHT---SEEEEESSHHHHHHHHHHHHHH
T ss_pred HhhhhhhcCCcEEEEecCccc--------cccCHHHHHHHHHHHHHhcCC--CEEEEcCcCCCCcHHHHHHHHh
Confidence 4455665676 6888876532 224677888999999988665 699999875555 777777654
No 335
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=21.44 E-value=1.3e+02 Score=22.44 Aligned_cols=61 Identities=21% Similarity=0.173 Sum_probs=33.3
Q ss_pred EEEeCCCCCChhHHHHHHHHHHHC-CCeEEEeCC--CCCCCCCCCCCCcCCHHHHHHHHHHHHHHc
Q 021765 98 FVLIHGEGFGAWCWYKTVASLEEV-GLIPTALDL--KGSGIDLSDTNSVTTLAEYSKPLLDYLENL 160 (308)
Q Consensus 98 vvllHG~~~~~~~~~~~~~~L~~~-G~~vi~~D~--~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l 160 (308)
||++.|..++.... +++.|+++ |+.++..|- .-.+................+.+.+.++.+
T Consensus 1 vI~I~G~~gsGKST--~a~~La~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 64 (121)
T PF13207_consen 1 VIIISGPPGSGKST--LAKELAERLGFPVISMDDLIREPGWIERDDDEREYIDADIDLLDDILEQL 64 (121)
T ss_dssp EEEEEESTTSSHHH--HHHHHHHHHTCEEEEEHHHHCCGTHCHGCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCHHH--HHHHHHHHHCCeEEEecceEEeccccccCcchhhHHHHHHHHHHHHHHhh
Confidence 57888888777753 44555554 899988886 433333211111111233444555556555
No 336
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=21.23 E-value=1.7e+02 Score=23.80 Aligned_cols=32 Identities=22% Similarity=0.183 Sum_probs=22.6
Q ss_pred HHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhC
Q 021765 153 LLDYLENLLEDEKVILVGHSSGGACVSYALEHF 185 (308)
Q Consensus 153 l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~ 185 (308)
+.+.++..+.. .-.++|-|.|+.++..++...
T Consensus 18 vl~~L~~~~~~-~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 18 VLKALEEAGIP-IDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHcCCC-eeEEEEECHHHHHHHHHHcCC
Confidence 33444444543 558999999999998888653
No 337
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=20.98 E-value=3e+02 Score=27.04 Aligned_cols=71 Identities=14% Similarity=0.066 Sum_probs=48.5
Q ss_pred CceEEEEeCCCCCChh--HHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHH-HHHHHHHHHcCCCCcEEEEE
Q 021765 94 QYKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYS-KPLLDYLENLLEDEKVILVG 170 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~-~~l~~~l~~l~~~~~v~lvG 170 (308)
+.+.||++.|+.+++. .-..+...|..+|++|+++..|.. ++.. .-+-.+-..+...+.|.|+=
T Consensus 38 ~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~~-------------eE~~~~flwRfw~~lP~~G~I~IFd 104 (493)
T TIGR03708 38 GFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPSD-------------EERERPPMWRFWRRLPPKGKIGIFF 104 (493)
T ss_pred CCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCCH-------------HHhcCcHHHHHHHhCCCCCeEEEEc
Confidence 3478999999977765 456788899999999999987621 1221 22334556666656888887
Q ss_pred eChhHHH
Q 021765 171 HSSGGAC 177 (308)
Q Consensus 171 hS~GG~~ 177 (308)
-|+=+-+
T Consensus 105 RSWY~~v 111 (493)
T TIGR03708 105 GSWYTRP 111 (493)
T ss_pred Ccccchh
Confidence 7764443
No 338
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=20.80 E-value=1.1e+02 Score=29.05 Aligned_cols=37 Identities=14% Similarity=0.046 Sum_probs=25.7
Q ss_pred HHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhCCcccc
Q 021765 153 LLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKIS 190 (308)
Q Consensus 153 l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~ 190 (308)
+...+...+.. +-++.|-|.|+.++..++..-++.+.
T Consensus 101 v~kaL~e~gl~-p~~i~GtS~Gaivaa~~a~~~~~e~~ 137 (391)
T cd07229 101 VVKALWLRGLL-PRIITGTATGALIAALVGVHTDEELL 137 (391)
T ss_pred HHHHHHHcCCC-CceEEEecHHHHHHHHHHcCCHHHHH
Confidence 33444555554 55799999999999999886544433
No 339
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=20.74 E-value=1.3e+02 Score=24.52 Aligned_cols=32 Identities=19% Similarity=0.117 Sum_probs=21.0
Q ss_pred EeCCCCCChhHH--HHHHHHHHHCCCeEEEeCCC
Q 021765 100 LIHGEGFGAWCW--YKTVASLEEVGLIPTALDLK 131 (308)
Q Consensus 100 llHG~~~~~~~~--~~~~~~L~~~G~~vi~~D~~ 131 (308)
+.++-||..... ..++..|+++|++|+.+|.-
T Consensus 3 v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 3 VTSGKGGVGKTTIAANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp EEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEES
T ss_pred EEcCCCCccHHHHHHHHHhccccccccccccccC
Confidence 344444444432 36788899999999999983
No 340
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=20.73 E-value=2.6e+02 Score=25.76 Aligned_cols=32 Identities=16% Similarity=0.009 Sum_probs=22.5
Q ss_pred cCCCceEEEEeCCCCCChhHHH--HHHHHHHHCC
Q 021765 91 ENIQYKKFVLIHGEGFGAWCWY--KTVASLEEVG 122 (308)
Q Consensus 91 ~~~~~~~vvllHG~~~~~~~~~--~~~~~L~~~G 122 (308)
+++.+|.++=+||+.++...|- -+++.+-..|
T Consensus 105 ~~p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~G 138 (344)
T KOG2170|consen 105 PNPRKPLVLSFHGWTGTGKNYVAEIIAENLYRGG 138 (344)
T ss_pred CCCCCCeEEEecCCCCCchhHHHHHHHHHHHhcc
Confidence 4567889999999999988763 2444444434
No 341
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=20.72 E-value=1e+02 Score=29.54 Aligned_cols=24 Identities=21% Similarity=0.318 Sum_probs=19.3
Q ss_pred cEEEEEeChhHHHHHHHHHhCCcc
Q 021765 165 KVILVGHSSGGACVSYALEHFPQK 188 (308)
Q Consensus 165 ~v~lvGhS~GG~~a~~~a~~~p~~ 188 (308)
+-++.|-|.|+.++..++...+++
T Consensus 102 p~vIsGTSaGAivAal~as~~~ee 125 (421)
T cd07230 102 PRIISGSSAGSIVAAILCTHTDEE 125 (421)
T ss_pred CCEEEEECHHHHHHHHHHcCCHHH
Confidence 337999999999999888765554
No 342
>TIGR01120 rpiB ribose 5-phosphate isomerase B. Involved in the non-oxidative branch of the pentose phospate pathway.
Probab=20.22 E-value=4.6e+02 Score=21.01 Aligned_cols=72 Identities=21% Similarity=0.183 Sum_probs=39.7
Q ss_pred HHHHHHHHCCCeEEEeCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHcCCCCcEEEEEeChhHHHHHHHHHhCCccccEE
Q 021765 113 KTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKA 192 (308)
Q Consensus 113 ~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~l 192 (308)
.+.++|.++||.|+-+-. +. ....++.+++..+...+..-..+.-|.+.|--+| ...+|.++|. |.+.
T Consensus 16 ~l~~~L~~~g~eV~D~G~--~~------~~~~dYpd~a~~va~~V~~~~~~~GIliCGtGiG---~siaANK~~G-Iraa 83 (143)
T TIGR01120 16 EIKAFLVERGVKVIDKGT--WS------SERTDYPHYAKQVALAVAGGEVDGGILICGTGIG---MSIAANKFAG-IRAA 83 (143)
T ss_pred HHHHHHHHCCCEEEEeCC--CC------CCCCCHHHHHHHHHHHHHCCCCceEEEEcCCcHH---HHHHHhcCCC-eEEE
Confidence 577899999998854321 11 1124688888888777755443312333333233 2334556664 5554
Q ss_pred EEEc
Q 021765 193 IFLC 196 (308)
Q Consensus 193 Vli~ 196 (308)
+..+
T Consensus 84 ~~~d 87 (143)
T TIGR01120 84 LCSE 87 (143)
T ss_pred EECC
Confidence 4444
No 343
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=20.10 E-value=1.6e+02 Score=25.80 Aligned_cols=36 Identities=25% Similarity=0.211 Sum_probs=25.4
Q ss_pred CceEEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeCC
Q 021765 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDL 130 (308)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~ 130 (308)
+.+.+|++-|...+. .-+.++..|.+.||.|++-..
T Consensus 5 ~~~k~VlItgcs~GG-IG~ala~ef~~~G~~V~AtaR 40 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGG-IGYALAKEFARNGYLVYATAR 40 (289)
T ss_pred cCCCeEEEeecCCcc-hhHHHHHHHHhCCeEEEEEcc
Confidence 456777777754333 334688889999999998654
No 344
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=20.02 E-value=1.9e+02 Score=25.50 Aligned_cols=33 Identities=18% Similarity=0.131 Sum_probs=26.4
Q ss_pred EEEEeCCCCCChhHHHHHHHHHHHCCCeEEEeC
Q 021765 97 KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALD 129 (308)
Q Consensus 97 ~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D 129 (308)
.|+++-|-|.+..+=.-.+++|..+||.|..+-
T Consensus 62 ~V~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 62 RVLLVCGPGNNGGDGLVAARHLAHFGYEVTVCY 94 (246)
T ss_pred eEEEEECCCCCchhHHHHHHHHHHCCCeEEEEE
Confidence 577777877777776678899998999988765
No 345
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=20.01 E-value=1.9e+02 Score=26.42 Aligned_cols=35 Identities=11% Similarity=-0.033 Sum_probs=26.7
Q ss_pred ceEEEEeCC-CCCC-----hhHHHHHHHHHHHCCCeEEEeC
Q 021765 95 YKKFVLIHG-EGFG-----AWCWYKTVASLEEVGLIPTALD 129 (308)
Q Consensus 95 ~~~vvllHG-~~~~-----~~~~~~~~~~L~~~G~~vi~~D 129 (308)
+|.|++.|| ..+. .+.|..+++.|.++|+.|+.+-
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g 215 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFG 215 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 578999999 3322 3468889999999998888764
Done!