BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021774
(307 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/258 (40%), Positives = 159/258 (61%), Gaps = 4/258 (1%)
Query: 2 GTLTNGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
G L +G +AVK L E QG +F TE+ +S H NL+ L G C+ T R+LVY Y
Sbjct: 57 GRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 116
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ N S+ L ++ L+W KR I +G A+GLA+LH+ P I+HRD+KA+NILLD
Sbjct: 117 MANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD 176
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+EF +GDFGLAKL H+ + GT G++APEY+ G+ + K DV+ +GV++LE+
Sbjct: 177 EEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLEL 236
Query: 181 ISGRNSGK--AMWGQMNKFLLEWAWQLHQEEKPLELVDPEL-GEYPPNEIIRYMKVAFFC 237
I+G+ + + + LL+W L +E+K LVD +L G Y E+ + ++VA C
Sbjct: 237 ITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLC 296
Query: 238 TQAAASRRPQMNQVIKML 255
TQ++ RP+M++V++ML
Sbjct: 297 TQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 195 bits (495), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/261 (39%), Positives = 159/261 (60%), Gaps = 4/261 (1%)
Query: 2 GTLTNGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
G L +G +AVK L E QG +F TE+ +S H NL+ L G C+ T R+LVY Y
Sbjct: 49 GRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 108
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ N S+ L ++ L+W KR I +G A+GLA+LH+ P I+HRD+KA+NILLD
Sbjct: 109 MANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD 168
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+EF +GDFGLAKL H+ + G G++APEY+ G+ + K DV+ +GV++LE+
Sbjct: 169 EEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLEL 228
Query: 181 ISGRNSGK--AMWGQMNKFLLEWAWQLHQEEKPLELVDPEL-GEYPPNEIIRYMKVAFFC 237
I+G+ + + + LL+W L +E+K LVD +L G Y E+ + ++VA C
Sbjct: 229 ITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLC 288
Query: 238 TQAAASRRPQMNQVIKMLTKN 258
TQ++ RP+M++V++ML +
Sbjct: 289 TQSSPMERPKMSEVVRMLEGD 309
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/264 (40%), Positives = 161/264 (60%), Gaps = 5/264 (1%)
Query: 2 GTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYV 61
G L +G ++A+K + ES QG+ EF TEI TLS RHP+LV LIG C + IL+Y+Y+
Sbjct: 58 GVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYM 117
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
EN +L R L G+ + ++WE+R +IC+G A+GL +LH I+HRD+K+ NILLD+
Sbjct: 118 ENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDE 174
Query: 122 EFNPKIGDFGLAKLFPD-NITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
F PKI DFG++K + + TH+ + GT GY+ PEY + G+LT K+DVYSFGV++ E+
Sbjct: 175 NFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEV 234
Query: 181 ISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGE-YPPNEIIRYMKVAFFCTQ 239
+ R++ + L EWA + H + ++VDP L + P + ++ A C
Sbjct: 235 LCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLA 294
Query: 240 AAASRRPQMNQVIKMLTKNIRLNE 263
++ RP M V+ L +RL E
Sbjct: 295 LSSEDRPSMGDVLWKLEYALRLQE 318
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/264 (40%), Positives = 160/264 (60%), Gaps = 5/264 (1%)
Query: 2 GTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYV 61
G L +G ++A+K + ES QG+ EF TEI TLS RHP+LV LIG C + IL+Y+Y+
Sbjct: 58 GVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYM 117
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
EN +L R L G+ + ++WE+R +IC+G A+GL +LH I+HRD+K+ NILLD+
Sbjct: 118 ENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDE 174
Query: 122 EFNPKIGDFGLAKLFPD-NITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
F PKI DFG++K + TH+ + GT GY+ PEY + G+LT K+DVYSFGV++ E+
Sbjct: 175 NFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEV 234
Query: 181 ISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGE-YPPNEIIRYMKVAFFCTQ 239
+ R++ + L EWA + H + ++VDP L + P + ++ A C
Sbjct: 235 LCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLA 294
Query: 240 AAASRRPQMNQVIKMLTKNIRLNE 263
++ RP M V+ L +RL E
Sbjct: 295 LSSEDRPSMGDVLWKLEYALRLQE 318
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 138/258 (53%), Gaps = 17/258 (6%)
Query: 6 NGRRIAVKPLSA----ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYV 61
N +AVK L+A +++ ++F EI ++ +H NLVEL+G G LVY Y+
Sbjct: 53 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
Query: 62 ENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
N SL DR L L+W R I G A G+ FLHE H +HRDIK++NILLD
Sbjct: 113 PNGSLLDR--LSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLD 167
Query: 121 QEFNPKIGDFGLAKL---FPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
+ F KI DFGLA+ F + + +RI GTT Y+APE L G++T K+D+YSFGV++
Sbjct: 168 EAFTAKISDFGLARASEKFAQTV--MXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVL 224
Query: 178 LEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFC 237
LEII+G + + L +E+ + +D ++ + + VA C
Sbjct: 225 LEIITGLPAVDEHR-EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQC 283
Query: 238 TQAAASRRPQMNQVIKML 255
++RP + +V ++L
Sbjct: 284 LHEKKNKRPDIKKVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 137/258 (53%), Gaps = 17/258 (6%)
Query: 6 NGRRIAVKPLSA----ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYV 61
N +AVK L+A +++ ++F EI ++ +H NLVEL+G G LVY Y+
Sbjct: 53 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
Query: 62 ENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
N SL DR L L+W R I G A G+ FLHE H +HRDIK++NILLD
Sbjct: 113 PNGSLLDR--LSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLD 167
Query: 121 QEFNPKIGDFGLAKL---FPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
+ F KI DFGLA+ F + + RI GTT Y+APE L G++T K+D+YSFGV++
Sbjct: 168 EAFTAKISDFGLARASEKFAQTV--MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVL 224
Query: 178 LEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFC 237
LEII+G + + L +E+ + +D ++ + + VA C
Sbjct: 225 LEIITGLPAVDEHR-EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQC 283
Query: 238 TQAAASRRPQMNQVIKML 255
++RP + +V ++L
Sbjct: 284 LHEKKNKRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 137/258 (53%), Gaps = 17/258 (6%)
Query: 6 NGRRIAVKPLSA----ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYV 61
N +AVK L+A +++ ++F EI ++ +H NLVEL+G G LVY Y+
Sbjct: 47 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 106
Query: 62 ENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
N SL DR L L+W R I G A G+ FLHE H +HRDIK++NILLD
Sbjct: 107 PNGSLLDR--LSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLD 161
Query: 121 QEFNPKIGDFGLAKL---FPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
+ F KI DFGLA+ F + + RI GTT Y+APE L G++T K+D+YSFGV++
Sbjct: 162 EAFTAKISDFGLARASEKFAQXV--MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVL 218
Query: 178 LEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFC 237
LEII+G + + L +E+ + +D ++ + + VA C
Sbjct: 219 LEIITGLPAVDEHR-EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQC 277
Query: 238 TQAAASRRPQMNQVIKML 255
++RP + +V ++L
Sbjct: 278 LHEKKNKRPDIKKVQQLL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 133/258 (51%), Gaps = 17/258 (6%)
Query: 6 NGRRIAVKPLSA----ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYV 61
N +AVK L+A +++ ++F EI + +H NLVEL+G G LVY Y
Sbjct: 44 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYX 103
Query: 62 ENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
N SL DR L L+W R I G A G+ FLHE H +HRDIK++NILLD
Sbjct: 104 PNGSLLDR--LSCLDGTPPLSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLD 158
Query: 121 QEFNPKIGDFGLAKL---FPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
+ F KI DFGLA+ F + +RI GTT Y APE L G++T K+D+YSFGV++
Sbjct: 159 EAFTAKISDFGLARASEKFAQXVX--XSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVL 215
Query: 178 LEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFC 237
LEII+G + + L +E+ + +D + + + VA C
Sbjct: 216 LEIITGLPAVDEHR-EPQLLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQC 274
Query: 238 TQAAASRRPQMNQVIKML 255
++RP + +V ++L
Sbjct: 275 LHEKKNKRPDIKKVQQLL 292
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 107/192 (55%), Gaps = 9/192 (4%)
Query: 6 NGRRIAVKPLSAES--KQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
+G +AVK L + + V EF+ E+ + +RHPN+V +G Q +V EY+
Sbjct: 59 HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSR 118
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
SL R LL + A +L+ +R + +AKG+ +LH P IVHRD+K+ N+L+D+++
Sbjct: 119 GSLYR-LLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKY 176
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
K+ DFGL++L + AGT ++APE + K+DVYSFGV++ E+ +
Sbjct: 177 TVKVCDFGLSRLKASXFL-XSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATL 235
Query: 184 RNSGKAMWGQMN 195
+ WG +N
Sbjct: 236 QQP----WGNLN 243
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 129/260 (49%), Gaps = 33/260 (12%)
Query: 7 GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL 66
+ +A+K + +ES++ + FI E+ LS V HPN+V+L G C+ LV EY E SL
Sbjct: 32 AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLNPV--CLVMEYAEGGSL 87
Query: 67 DRVLLGATK-----ANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
VL GA A ++W C+ ++G+A+LH ++HRD+K N+LL
Sbjct: 88 YNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA 141
Query: 122 EFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
KI DFG A D TH+T G+ ++APE G + K DV+S+G+++ E+
Sbjct: 142 GGTVLKICDFGTAC---DIQTHMTNN-KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEV 197
Query: 181 ISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQA 240
I+ R + G + + W +H + P L + P I M C
Sbjct: 198 ITRRKPFDEIGGPAFRIM----WAVHNGTR------PPLIKNLPKPIESLMTR---CWSK 244
Query: 241 AASRRPQMNQVIKMLTKNIR 260
S+RP M +++K++T +R
Sbjct: 245 DPSQRPSMEEIVKIMTHLMR 264
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 129/260 (49%), Gaps = 33/260 (12%)
Query: 7 GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL 66
+ +A+K + +ES++ + FI E+ LS V HPN+V+L G C+ LV EY E SL
Sbjct: 31 AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLNPV--CLVMEYAEGGSL 86
Query: 67 DRVLLGATK-----ANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
VL GA A ++W C+ ++G+A+LH ++HRD+K N+LL
Sbjct: 87 YNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA 140
Query: 122 EFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
KI DFG A D TH+T G+ ++APE G + K DV+S+G+++ E+
Sbjct: 141 GGTVLKICDFGTAC---DIQTHMTNN-KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEV 196
Query: 181 ISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQA 240
I+ R + G + + W +H + P L + P I M C
Sbjct: 197 ITRRKPFDEIGGPAFRIM----WAVHNGTR------PPLIKNLPKPIESLMTR---CWSK 243
Query: 241 AASRRPQMNQVIKMLTKNIR 260
S+RP M +++K++T +R
Sbjct: 244 DPSQRPSMEEIVKIMTHLMR 263
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 111/193 (57%), Gaps = 11/193 (5%)
Query: 6 NGRRIAVKPLSAES--KQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
+G +AVK L + + V EF+ E+ + +RHPN+V +G Q +V EY+
Sbjct: 59 HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSR 118
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
SL R LL + A +L+ +R + +AKG+ +LH P IVHR++K+ N+L+D+++
Sbjct: 119 GSLYR-LLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKY 176
Query: 124 NPKIGDFGLAKLFPDNITHITTR-IAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
K+ DFGL++L T ++++ AGT ++APE + K+DVYSFGV++ E+ +
Sbjct: 177 TVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
Query: 183 GRNSGKAMWGQMN 195
+ WG +N
Sbjct: 235 LQQP----WGNLN 243
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 26/192 (13%)
Query: 7 GRRIAVKPLSAESKQGVREFI----TEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVE 62
G +AVK + + + + I E + ++HPN++ L G C++ LV E+
Sbjct: 30 GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89
Query: 63 NNSLDRVLLGA-TKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
L+RVL G +I +NW V IA+G+ +LH+E + I+HRD+K+SNIL+ Q
Sbjct: 90 GGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQ 143
Query: 122 EFNP--------KIGDFGLAKLFPDNITHITTRI--AGTTGYLAPEYVLGGQLTMKADVY 171
+ KI DFGLA+ + H TT++ AG ++APE + + +DV+
Sbjct: 144 KVENGDLSNKILKITDFGLAREW-----HRTTKMSAAGAYAWMAPEVIRASMFSKGSDVW 198
Query: 172 SFGVLVLEIISG 183
S+GVL+ E+++G
Sbjct: 199 SYGVLLWELLTG 210
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 13/185 (7%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVRE---FITEIMTLSNVRHPNLVELIGCCVQGTRRILV 57
MG ++AVK L KQG F+ E + ++H LV L Q I+
Sbjct: 37 MGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 92
Query: 58 YEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNI 117
EY+EN SL L T + IKL K D+ IA+G+AF+ E + +HRD++A+NI
Sbjct: 93 -EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 146
Query: 118 LLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
L+ + KI DFGLA+L DN + APE + G T+K+DV+SFG+L+
Sbjct: 147 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 206
Query: 178 LEIIS 182
EI++
Sbjct: 207 TEIVT 211
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 13/185 (7%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVRE---FITEIMTLSNVRHPNLVELIGCCVQGTRRILV 57
MG ++AVK L KQG F+ E + ++H LV L Q I+
Sbjct: 39 MGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 94
Query: 58 YEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNI 117
EY+EN SL L T + IKL K D+ IA+G+AF+ E + +HRD++A+NI
Sbjct: 95 -EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 148
Query: 118 LLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
L+ + KI DFGLA+L DN + APE + G T+K+DV+SFG+L+
Sbjct: 149 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 208
Query: 178 LEIIS 182
EI++
Sbjct: 209 TEIVT 213
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 95/182 (52%), Gaps = 7/182 (3%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
MG ++AVK L + F+ E + ++H LV L Q I+ EY
Sbjct: 40 MGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EY 97
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+EN SL L T + IKL K D+ IA+G+AF+ E + +HRD++A+NIL+
Sbjct: 98 MENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVS 152
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ KI DFGLA+L DN + APE + G T+K+DV+SFG+L+ EI
Sbjct: 153 DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 212
Query: 181 IS 182
++
Sbjct: 213 VT 214
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 13/185 (7%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVRE---FITEIMTLSNVRHPNLVELIGCCVQGTRRILV 57
MG ++AVK L KQG F+ E + ++H LV L Q I+
Sbjct: 41 MGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 96
Query: 58 YEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNI 117
EY+EN SL L T + IKL K D+ IA+G+AF+ E + +HRD++A+NI
Sbjct: 97 -EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 150
Query: 118 LLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
L+ + KI DFGLA+L DN + APE + G T+K+DV+SFG+L+
Sbjct: 151 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 210
Query: 178 LEIIS 182
EI++
Sbjct: 211 TEIVT 215
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 13/185 (7%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVRE---FITEIMTLSNVRHPNLVELIGCCVQGTRRILV 57
MG ++AVK L KQG F+ E + ++H LV L Q I+
Sbjct: 33 MGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 88
Query: 58 YEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNI 117
EY+EN SL L T + IKL K D+ IA+G+AF+ E + +HRD++A+NI
Sbjct: 89 -EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 142
Query: 118 LLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
L+ + KI DFGLA+L DN + APE + G T+K+DV+SFG+L+
Sbjct: 143 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 202
Query: 178 LEIIS 182
EI++
Sbjct: 203 TEIVT 207
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 13/185 (7%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVRE---FITEIMTLSNVRHPNLVELIGCCVQGTRRILV 57
MG ++AVK L KQG F+ E + ++H LV L Q I+
Sbjct: 31 MGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 86
Query: 58 YEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNI 117
EY+EN SL L T + IKL K D+ IA+G+AF+ E + +HRD++A+NI
Sbjct: 87 -EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 140
Query: 118 LLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
L+ + KI DFGLA+L DN + APE + G T+K+DV+SFG+L+
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 178 LEIIS 182
EI++
Sbjct: 201 TEIVT 205
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 13/185 (7%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVRE---FITEIMTLSNVRHPNLVELIGCCVQGTRRILV 57
MG ++AVK L KQG F+ E + ++H LV L Q I+
Sbjct: 32 MGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 87
Query: 58 YEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNI 117
EY+EN SL L T + IKL K D+ IA+G+AF+ E + +HRD++A+NI
Sbjct: 88 -EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 141
Query: 118 LLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
L+ + KI DFGLA+L DN + APE + G T+K+DV+SFG+L+
Sbjct: 142 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 201
Query: 178 LEIIS 182
EI++
Sbjct: 202 TEIVT 206
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 13/185 (7%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVRE---FITEIMTLSNVRHPNLVELIGCCVQGTRRILV 57
MG ++AVK L KQG F+ E + ++H LV L Q I+
Sbjct: 36 MGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 91
Query: 58 YEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNI 117
EY+EN SL L T + IKL K D+ IA+G+AF+ E + +HRD++A+NI
Sbjct: 92 -EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 145
Query: 118 LLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
L+ + KI DFGLA+L DN + APE + G T+K+DV+SFG+L+
Sbjct: 146 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 205
Query: 178 LEIIS 182
EI++
Sbjct: 206 TEIVT 210
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 13/185 (7%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVRE---FITEIMTLSNVRHPNLVELIGCCVQGTRRILV 57
MG ++AVK L KQG F+ E + ++H LV L Q I+
Sbjct: 37 MGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 92
Query: 58 YEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNI 117
EY+EN SL L T + IKL K D+ IA+G+AF+ E + +HRD++A+NI
Sbjct: 93 -EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 146
Query: 118 LLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
L+ + KI DFGLA+L DN + APE + G T+K+DV+SFG+L+
Sbjct: 147 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 206
Query: 178 LEIIS 182
EI++
Sbjct: 207 TEIVT 211
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 13/185 (7%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVRE---FITEIMTLSNVRHPNLVELIGCCVQGTRRILV 57
MG ++AVK L KQG F+ E + ++H LV L Q I+
Sbjct: 31 MGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 86
Query: 58 YEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNI 117
EY+EN SL L T + IKL K D+ IA+G+AF+ E + +HRD++A+NI
Sbjct: 87 -EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 140
Query: 118 LLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
L+ + KI DFGLA+L DN + APE + G T+K+DV+SFG+L+
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 178 LEIIS 182
EI++
Sbjct: 201 TEIVT 205
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 13/185 (7%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVRE---FITEIMTLSNVRHPNLVELIGCCVQGTRRILV 57
MG ++AVK L KQG F+ E + ++H LV L Q I+
Sbjct: 31 MGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 86
Query: 58 YEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNI 117
EY+EN SL L T + IKL K D+ IA+G+AF+ E + +HRD++A+NI
Sbjct: 87 -EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 140
Query: 118 LLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
L+ + KI DFGLA+L DN + APE + G T+K+DV+SFG+L+
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 178 LEIIS 182
EI++
Sbjct: 201 TEIVT 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 13/185 (7%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVRE---FITEIMTLSNVRHPNLVELIGCCVQGTRRILV 57
MG ++AVK L KQG F+ E + ++H LV L Q I+
Sbjct: 26 MGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 81
Query: 58 YEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNI 117
EY+EN SL L T + IKL K D+ IA+G+AF+ E + +HRD++A+NI
Sbjct: 82 -EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 135
Query: 118 LLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
L+ + KI DFGLA+L DN + APE + G T+K+DV+SFG+L+
Sbjct: 136 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 195
Query: 178 LEIIS 182
EI++
Sbjct: 196 TEIVT 200
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 96/185 (51%), Gaps = 13/185 (7%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVRE---FITEIMTLSNVRHPNLVELIGCCVQGTRRILV 57
MG ++AVK L KQG F+ E + ++H LV L Q I+
Sbjct: 31 MGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 86
Query: 58 YEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNI 117
EY+EN SL L T + IKL K D+ IA+G+AF+ E + +HRD++A+NI
Sbjct: 87 -EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 140
Query: 118 LLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
L+ + KI DFGLA+L D + APE + G T+K+DV+SFG+L+
Sbjct: 141 LVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 178 LEIIS 182
EI++
Sbjct: 201 TEIVT 205
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 97/185 (52%), Gaps = 13/185 (7%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVRE---FITEIMTLSNVRHPNLVELIGCCVQGTRRILV 57
MG ++AVK L KQG F+ E + ++H LV L Q I+
Sbjct: 27 MGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 82
Query: 58 YEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNI 117
EY+EN SL L T + IKL K D+ IA+G+AF+ E + +HR+++A+NI
Sbjct: 83 -EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRNLRAANI 136
Query: 118 LLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
L+ + KI DFGLA+L DN + APE + G T+K+DV+SFG+L+
Sbjct: 137 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 196
Query: 178 LEIIS 182
EI++
Sbjct: 197 TEIVT 201
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 22/199 (11%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL--- 66
+AVK L S ++F E L+N++H ++V+ G CV+G I+V+EY+++ L
Sbjct: 46 VAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF 105
Query: 67 ------DRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
D VL+ +L + I IA G+ +L + H VHRD+ N L+
Sbjct: 106 LRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVG 162
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVL 176
+ KIGDFG+++ D + R+ G T ++ PE ++ + T ++DV+S GV+
Sbjct: 163 ENLLVKIGDFGMSR---DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVV 219
Query: 177 VLEIISGRNSGKAMWGQMN 195
+ EI + GK W Q++
Sbjct: 220 LWEIFT---YGKQPWYQLS 235
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 131/262 (50%), Gaps = 28/262 (10%)
Query: 7 GRR---IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVE 62
G+R +A+K L S +++ R+F++E + HPN++ L G + T +++ E++E
Sbjct: 58 GKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFME 117
Query: 63 NNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQE 122
N SLD L + + + + + GIA G+ +L + + VHRD+ A NIL++
Sbjct: 118 NGSLDSFL---RQNDGQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSN 171
Query: 123 FNPKIGDFGLAKLFPDNITH--ITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVL 178
K+ DFGL++ D+ + T+ + G + APE + + T +DV+S+G+++
Sbjct: 172 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMW 231
Query: 179 EIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCT 238
E++S + W N+ ++ Q ++ P++ P+ + + M C
Sbjct: 232 EVMS--YGERPYWDMTNQDVINAIEQDYRLPPPMDC---------PSALHQLM---LDCW 277
Query: 239 QAAASRRPQMNQVIKMLTKNIR 260
Q + RP+ Q++ L K IR
Sbjct: 278 QKDRNHRPKFGQIVNTLDKMIR 299
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 92/182 (50%), Gaps = 7/182 (3%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
MGT R+A+K L F+ E + +RH LV+L + I V EY
Sbjct: 26 MGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIXI-VTEY 83
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ SL L G T ++L + D+ IA G+A++ + VHRD++A+NIL+
Sbjct: 84 MSKGSLLDFLKGETGKYLRLP--QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVG 138
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ K+ DFGLA+L DN + APE L G+ T+K+DV+SFG+L+ E+
Sbjct: 139 ENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 198
Query: 181 IS 182
+
Sbjct: 199 TT 200
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 92/182 (50%), Gaps = 7/182 (3%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
MGT R+A+K L F+ E + +RH LV+L V +V EY
Sbjct: 29 MGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEY 86
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ SL L G T ++L + D+ IA G+A++ + VHRD++A+NIL+
Sbjct: 87 MSKGSLLDFLKGETGKYLRLP--QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVG 141
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ K+ DFGLA+L DN + APE L G+ T+K+DV+SFG+L+ E+
Sbjct: 142 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 201
Query: 181 IS 182
+
Sbjct: 202 TT 203
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 92/182 (50%), Gaps = 7/182 (3%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
MGT R+A+K L F+ E + +RH LV+L V +V EY
Sbjct: 33 MGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEY 90
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ SL L G T ++L + D+ IA G+A++ + VHRD++A+NIL+
Sbjct: 91 MNKGSLLDFLKGETGKYLRL--PQLVDMSAQIASGMAYVERM---NYVHRDLRAANILVG 145
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ K+ DFGLA+L DN + APE L G+ T+K+DV+SFG+L+ E+
Sbjct: 146 ENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 205
Query: 181 IS 182
+
Sbjct: 206 TT 207
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 92/182 (50%), Gaps = 7/182 (3%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
MGT R+A+K L F+ E + +RH LV+L V +V EY
Sbjct: 33 MGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEY 90
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ SL L G T ++L + D+ IA G+A++ + VHRD++A+NIL+
Sbjct: 91 MNKGSLLDFLKGETGKYLRL--PQLVDMSAQIASGMAYVERM---NYVHRDLRAANILVG 145
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ K+ DFGLA+L DN + APE L G+ T+K+DV+SFG+L+ E+
Sbjct: 146 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 205
Query: 181 IS 182
+
Sbjct: 206 TT 207
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 122/254 (48%), Gaps = 23/254 (9%)
Query: 10 IAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A + + R+F++E + HPN++ L G + +++ EY+EN SLD
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 69 VLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 128
L K + + + + GI G+ +L + VHRD+ A NIL++ K+
Sbjct: 120 FL---RKNDGRFTVIQLVGMLRGIGSGMKYLSDM---SAVHRDLAARNILVNSNLVCKVS 173
Query: 129 DFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS 186
DFG++++ D+ T G + APE + + T +DV+S+G+++ E++S
Sbjct: 174 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS--YG 231
Query: 187 GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRP 246
+ W N+ +++ + ++ P++ I ++ C Q S RP
Sbjct: 232 ERPYWDMSNQDVIKAIEEGYRLPPPMDCP------------IALHQLMLDCWQKERSDRP 279
Query: 247 QMNQVIKMLTKNIR 260
+ Q++ ML K IR
Sbjct: 280 KFGQIVNMLDKLIR 293
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 122/254 (48%), Gaps = 23/254 (9%)
Query: 10 IAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A + + R+F++E + HPN++ L G + +++ EY+EN SLD
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
Query: 69 VLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 128
L K + + + + GI G+ +L + VHRD+ A NIL++ K+
Sbjct: 99 FL---RKNDGRFTVIQLVGMLRGIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCKVS 152
Query: 129 DFGLAKLFPDNITHITTRIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS 186
DFG++++ D+ T G + APE + + T +DV+S+G+++ E++S
Sbjct: 153 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS--YG 210
Query: 187 GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRP 246
+ W N+ +++ + ++ P++ I ++ C Q S RP
Sbjct: 211 ERPYWDMSNQDVIKAIEEGYRLPPPMDCP------------IALHQLMLDCWQKERSDRP 258
Query: 247 QMNQVIKMLTKNIR 260
+ Q++ ML K IR
Sbjct: 259 KFGQIVNMLDKLIR 272
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 122/254 (48%), Gaps = 23/254 (9%)
Query: 10 IAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A + + R+F++E + HPN++ L G + +++ EY+EN SLD
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 104
Query: 69 VLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 128
L K + + + + GI G+ +L + VHRD+ A NIL++ K+
Sbjct: 105 FL---RKNDGRFTVIQLVGMLRGIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCKVS 158
Query: 129 DFGLAKLFPDNITHITTRIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS 186
DFG++++ D+ T G + APE + + T +DV+S+G+++ E++S
Sbjct: 159 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS--YG 216
Query: 187 GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRP 246
+ W N+ +++ + ++ P++ I ++ C Q S RP
Sbjct: 217 ERPYWDMSNQDVIKAIEEGYRLPPPMDCP------------IALHQLMLDCWQKERSDRP 264
Query: 247 QMNQVIKMLTKNIR 260
+ Q++ ML K IR
Sbjct: 265 KFGQIVNMLDKLIR 278
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 92/182 (50%), Gaps = 7/182 (3%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
MGT R+A+K L F+ E + +RH LV+L V +V EY
Sbjct: 202 MGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEY 259
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ SL L G T ++L + D+ IA G+A++ + VHRD++A+NIL+
Sbjct: 260 MSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVG 314
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ K+ DFGLA+L DN + APE L G+ T+K+DV+SFG+L+ E+
Sbjct: 315 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 181 IS 182
+
Sbjct: 375 TT 376
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 92/182 (50%), Gaps = 7/182 (3%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
MGT R+A+K L F+ E + +RH LV+L V +V EY
Sbjct: 202 MGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEY 259
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ SL L G T ++L + D+ IA G+A++ + VHRD++A+NIL+
Sbjct: 260 MSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVG 314
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ K+ DFGLA+L DN + APE L G+ T+K+DV+SFG+L+ E+
Sbjct: 315 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 181 IS 182
+
Sbjct: 375 TT 376
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 124/254 (48%), Gaps = 23/254 (9%)
Query: 10 IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L +++ R+F+ E + HPN++ L G + ++V EY+EN SLD
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT 112
Query: 69 VLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 128
L K + + + + GI+ G+ +L + VHRD+ A NIL++ K+
Sbjct: 113 FL---KKNDGQFTVIQLVGMLRGISAGMKYLSDM---GYVHRDLAARNILINSNLVCKVS 166
Query: 129 DFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS 186
DFGL+++ D+ T G + APE + + T +DV+S+G+++ E++S
Sbjct: 167 DFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS--YG 224
Query: 187 GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRP 246
+ W N+ +++ + ++ P++ P + + M C Q + RP
Sbjct: 225 ERPYWEMTNQDVIKAVEEGYRLPSPMDC---------PAALYQLM---LDCWQKERNSRP 272
Query: 247 QMNQVIKMLTKNIR 260
+ ++++ ML K IR
Sbjct: 273 KFDEIVNMLDKLIR 286
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 125/254 (49%), Gaps = 23/254 (9%)
Query: 10 IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L +++ R+F+ E + HPN+V L G +G ++V E++EN +LD
Sbjct: 74 VAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDA 133
Query: 69 VLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 128
L K + + + + GIA G+ +L + VHRD+ A NIL++ K+
Sbjct: 134 FL---RKHDGQFTVIQLVGMLRGIAAGMRYLADM---GYVHRDLAARNILVNSNLVCKVS 187
Query: 129 DFGLAKLFPDNITHITTRIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS 186
DFGL+++ D+ + T G + APE + + T +DV+S+G+++ E++S
Sbjct: 188 DFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS--YG 245
Query: 187 GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRP 246
+ W N+ +++ + ++ P++ P + + M C Q + RP
Sbjct: 246 ERPYWDMSNQDVIKAIEEGYRLPAPMDC---------PAGLHQLM---LDCWQKERAERP 293
Query: 247 QMNQVIKMLTKNIR 260
+ Q++ +L K IR
Sbjct: 294 KFEQIVGILDKMIR 307
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 123/254 (48%), Gaps = 23/254 (9%)
Query: 10 IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L +++ R+F+ E + HPN++ L G + ++V EY+EN SLD
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 69 VLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 128
L K + + + + GIA G+ +L + VHRD+ A NIL++ K+
Sbjct: 136 FL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVS 189
Query: 129 DFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS 186
DFGLA++ D+ T G + +PE + + T +DV+S+G+++ E++S
Sbjct: 190 DFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YG 247
Query: 187 GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRP 246
+ W N+ +++ + ++ P++ P + + M C Q + RP
Sbjct: 248 ERPYWEMSNQDVIKAVDEGYRLPPPMDC---------PAALYQLM---LDCWQKDRNNRP 295
Query: 247 QMNQVIKMLTKNIR 260
+ Q++ +L K IR
Sbjct: 296 KFEQIVSILDKLIR 309
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 92/182 (50%), Gaps = 7/182 (3%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
MGT R+A+K L F+ E + +RH LV+L V +V EY
Sbjct: 202 MGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVGEY 259
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ SL L G T ++L + D+ IA G+A++ + VHRD++A+NIL+
Sbjct: 260 MSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVG 314
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ K+ DFGLA+L DN + APE L G+ T+K+DV+SFG+L+ E+
Sbjct: 315 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 181 IS 182
+
Sbjct: 375 TT 376
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 91/182 (50%), Gaps = 7/182 (3%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
MGT R+A+K L F+ E + +RH LV+L V +V EY
Sbjct: 36 MGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKIRHEKLVQLYAV-VSEEPIYIVTEY 93
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ SL L G ++L + D+ IA G+A++ + VHRD++A+NIL+
Sbjct: 94 MSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVG 148
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ K+ DFGLA+L DN + APE L G+ T+K+DV+SFG+L+ E+
Sbjct: 149 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 181 IS 182
+
Sbjct: 209 TT 210
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 7/182 (3%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
MGT R+A+K L F+ E + +RH LV+L + I++ EY
Sbjct: 36 MGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EY 93
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ SL L G ++L + D+ IA G+A++ + VHRD++A+NIL+
Sbjct: 94 MSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVG 148
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ K+ DFGLA+L DN + APE L G+ T+K+DV+SFG+L+ E+
Sbjct: 149 ENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 181 IS 182
+
Sbjct: 209 TT 210
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 7/182 (3%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
MGT R+A+K L F+ E + +RH LV+L + I++ EY
Sbjct: 36 MGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EY 93
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ SL L G ++L + D+ IA G+A++ + VHRD++A+NIL+
Sbjct: 94 MSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVG 148
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ K+ DFGLA+L DN + APE L G+ T+K+DV+SFG+L+ E+
Sbjct: 149 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 181 IS 182
+
Sbjct: 209 TT 210
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 93/182 (51%), Gaps = 7/182 (3%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
MGT R+A+K L + F+ E + +RH LV+L V +V EY
Sbjct: 285 MGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEY 342
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ SL L G T ++L + D+ IA G+A++ + VHRD++A+NIL+
Sbjct: 343 MSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVG 397
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ K+ DFGLA+L DN + APE L G+ T+K+DV+SFG+L+ E+
Sbjct: 398 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 457
Query: 181 IS 182
+
Sbjct: 458 TT 459
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 123/257 (47%), Gaps = 23/257 (8%)
Query: 10 IAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A +++ R+F++E + HPN++ L G +G ++V EY+EN SLD
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 69 VLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 128
L + + + + G+ G+ +L + VHRD+ A N+L+D K+
Sbjct: 140 FL---RTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVS 193
Query: 129 DFGLAKLFPDNITHITTRIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS 186
DFGL+++ D+ T G + APE + + +DV+SFGV++ E+++
Sbjct: 194 DFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA--YG 251
Query: 187 GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRP 246
+ W N+ ++ + ++ P+ P+ + + M C ++RP
Sbjct: 252 ERPYWNMTNRDVISSVEEGYRLPAPMGC---------PHALHQLM---LDCWHKDRAQRP 299
Query: 247 QMNQVIKMLTKNIRLNE 263
+ +Q++ +L IR E
Sbjct: 300 RFSQIVSVLDALIRSPE 316
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 91/182 (50%), Gaps = 7/182 (3%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
MGT R+A+K L F+ E + +RH LV+L V +V EY
Sbjct: 25 MGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEY 82
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ SL L G ++L + D+ IA G+A++ + VHRD++A+NIL+
Sbjct: 83 MSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVG 137
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ K+ DFGLA+L DN + APE L G+ T+K+DV+SFG+L+ E+
Sbjct: 138 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 197
Query: 181 IS 182
+
Sbjct: 198 TT 199
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 91/182 (50%), Gaps = 7/182 (3%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
MGT R+A+K L F+ E + +RH LV+L V +V EY
Sbjct: 27 MGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEY 84
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ SL L G ++L + D+ IA G+A++ + VHRD++A+NIL+
Sbjct: 85 MSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVG 139
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ K+ DFGLA+L DN + APE L G+ T+K+DV+SFG+L+ E+
Sbjct: 140 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 199
Query: 181 IS 182
+
Sbjct: 200 TT 201
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 123/254 (48%), Gaps = 23/254 (9%)
Query: 10 IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L +++ R+F+ E + HPN++ L G + ++V EY+EN SLD
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 69 VLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 128
L K + + + + GIA G+ +L + VHRD+ A NIL++ K+
Sbjct: 136 FL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GFVHRDLAARNILINSNLVCKVS 189
Query: 129 DFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS 186
DFGL+++ D+ T G + +PE + + T +DV+S+G+++ E++S
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YG 247
Query: 187 GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRP 246
+ W N+ +++ + ++ P++ P + + M C Q + RP
Sbjct: 248 ERPYWEMSNQDVIKAVDEGYRLPPPMDC---------PAALYQLM---LDCWQKDRNNRP 295
Query: 247 QMNQVIKMLTKNIR 260
+ Q++ +L K IR
Sbjct: 296 KFEQIVSILDKLIR 309
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 91/182 (50%), Gaps = 7/182 (3%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
MGT R+A+K L F+ E + +RH LV+L V +V EY
Sbjct: 36 MGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEY 93
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ SL L G ++L + D+ IA G+A++ + VHRD++A+NIL+
Sbjct: 94 MSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVG 148
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ K+ DFGLA+L DN + APE L G+ T+K+DV+SFG+L+ E+
Sbjct: 149 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 181 IS 182
+
Sbjct: 209 TT 210
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 123/257 (47%), Gaps = 23/257 (8%)
Query: 10 IAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A +++ R+F++E + HPN++ L G +G ++V EY+EN SLD
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 69 VLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 128
L + + + + G+ G+ +L + VHRD+ A N+L+D K+
Sbjct: 140 FL---RTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVS 193
Query: 129 DFGLAKLFPDNITHITTRIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS 186
DFGL+++ D+ T G + APE + + +DV+SFGV++ E+++
Sbjct: 194 DFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA--YG 251
Query: 187 GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRP 246
+ W N+ ++ + ++ P+ P+ + + M C ++RP
Sbjct: 252 ERPYWNMTNRDVISSVEEGYRLPAPMGC---------PHALHQLM---LDCWHKDRAQRP 299
Query: 247 QMNQVIKMLTKNIRLNE 263
+ +Q++ +L IR E
Sbjct: 300 RFSQIVSVLDALIRSPE 316
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 91/182 (50%), Gaps = 7/182 (3%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
MGT R+A+K L F+ E + +RH LV+L V +V EY
Sbjct: 36 MGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVCEY 93
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ SL L G ++L + D+ IA G+A++ + VHRD++A+NIL+
Sbjct: 94 MSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVG 148
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ K+ DFGLA+L DN + APE L G+ T+K+DV+SFG+L+ E+
Sbjct: 149 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 181 IS 182
+
Sbjct: 209 TT 210
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 123/254 (48%), Gaps = 23/254 (9%)
Query: 10 IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L +++ R+F+ E + HPN++ L G + ++V EY+EN SLD
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 69 VLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 128
L K + + + + GIA G+ +L + VHRD+ A NIL++ K+
Sbjct: 136 FL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVS 189
Query: 129 DFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS 186
DFGL+++ D+ T G + +PE + + T +DV+S+G+++ E++S
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YG 247
Query: 187 GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRP 246
+ W N+ +++ + ++ P++ P + + M C Q + RP
Sbjct: 248 ERPYWEMSNQDVIKAVDEGYRLPPPMDC---------PAALYQLM---LDCWQKDRNNRP 295
Query: 247 QMNQVIKMLTKNIR 260
+ Q++ +L K IR
Sbjct: 296 KFEQIVSILDKLIR 309
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 123/254 (48%), Gaps = 23/254 (9%)
Query: 10 IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L +++ R+F+ E + HPN++ L G + ++V EY+EN SLD
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 69 VLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 128
L K + + + + GIA G+ +L + VHRD+ A NIL++ K+
Sbjct: 136 FL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVS 189
Query: 129 DFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS 186
DFGL+++ D+ T G + +PE + + T +DV+S+G+++ E++S
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YG 247
Query: 187 GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRP 246
+ W N+ +++ + ++ P++ P + + M C Q + RP
Sbjct: 248 ERPYWEMSNQDVIKAVDEGYRLPPPMDC---------PAALYQLM---LDCWQKDRNNRP 295
Query: 247 QMNQVIKMLTKNIR 260
+ Q++ +L K IR
Sbjct: 296 KFEQIVSILDKLIR 309
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 123/254 (48%), Gaps = 23/254 (9%)
Query: 10 IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L +++ R+F+ E + HPN++ L G + ++V EY+EN SLD
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 69 VLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 128
L K + + + + GIA G+ +L + VHRD+ A NIL++ K+
Sbjct: 136 FL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVS 189
Query: 129 DFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS 186
DFGL+++ D+ T G + +PE + + T +DV+S+G+++ E++S
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YG 247
Query: 187 GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRP 246
+ W N+ +++ + ++ P++ P + + M C Q + RP
Sbjct: 248 ERPYWEMSNQDVIKAVDEGYRLPPPMDC---------PAALYQLM---LDCWQKDRNNRP 295
Query: 247 QMNQVIKMLTKNIR 260
+ Q++ +L K IR
Sbjct: 296 KFEQIVSILDKLIR 309
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 123/254 (48%), Gaps = 23/254 (9%)
Query: 10 IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L +++ R+F+ E + HPN++ L G + ++V EY+EN SLD
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 69 VLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 128
L K + + + + GIA G+ +L + VHRD+ A NIL++ K+
Sbjct: 136 FL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVS 189
Query: 129 DFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS 186
DFGL+++ D+ T G + +PE + + T +DV+S+G+++ E++S
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YG 247
Query: 187 GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRP 246
+ W N+ +++ + ++ P++ P + + M C Q + RP
Sbjct: 248 ERPYWEMSNQDVIKAVDEGYRLPPPMDC---------PAALYQLM---LDCWQKDRNNRP 295
Query: 247 QMNQVIKMLTKNIR 260
+ Q++ +L K IR
Sbjct: 296 KFEQIVSILDKLIR 309
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 123/254 (48%), Gaps = 23/254 (9%)
Query: 10 IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L +++ R+F+ E + HPN++ L G + ++V EY+EN SLD
Sbjct: 74 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 133
Query: 69 VLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 128
L K + + + + GIA G+ +L + VHRD+ A NIL++ K+
Sbjct: 134 FL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVS 187
Query: 129 DFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS 186
DFGL+++ D+ T G + +PE + + T +DV+S+G+++ E++S
Sbjct: 188 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YG 245
Query: 187 GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRP 246
+ W N+ +++ + ++ P++ P + + M C Q + RP
Sbjct: 246 ERPYWEMSNQDVIKAVDEGYRLPPPMDC---------PAALYQLM---LDCWQKDRNNRP 293
Query: 247 QMNQVIKMLTKNIR 260
+ Q++ +L K IR
Sbjct: 294 KFEQIVSILDKLIR 307
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 130/262 (49%), Gaps = 28/262 (10%)
Query: 7 GRR---IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVE 62
G+R +A+K L S +++ R+F++E + HPN++ L G + T +++ E++E
Sbjct: 32 GKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFME 91
Query: 63 NNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQE 122
N SLD L + + + + + GIA G+ +L + + VHR + A NIL++
Sbjct: 92 NGSLDSFL---RQNDGQFTVIQLVGMLRGIAAGMKYLADM---NYVHRALAARNILVNSN 145
Query: 123 FNPKIGDFGLAKLFPDNITH--ITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVL 178
K+ DFGL++ D+ + T+ + G + APE + + T +DV+S+G+++
Sbjct: 146 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMW 205
Query: 179 EIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCT 238
E++S + W N+ ++ Q ++ P++ P+ + + M C
Sbjct: 206 EVMS--YGERPYWDMTNQDVINAIEQDYRLPPPMDC---------PSALHQLM---LDCW 251
Query: 239 QAAASRRPQMNQVIKMLTKNIR 260
Q + RP+ Q++ L K IR
Sbjct: 252 QKDRNHRPKFGQIVNTLDKMIR 273
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 123/254 (48%), Gaps = 23/254 (9%)
Query: 10 IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L +++ R+F+ E + HPN++ L G + ++V EY+EN SLD
Sbjct: 64 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 123
Query: 69 VLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 128
L K + + + + GIA G+ +L + VHRD+ A NIL++ K+
Sbjct: 124 FL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVS 177
Query: 129 DFGLAKLFPDNITHITTRIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS 186
DFGL+++ D+ T G + +PE + + T +DV+S+G+++ E++S
Sbjct: 178 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YG 235
Query: 187 GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRP 246
+ W N+ +++ + ++ P++ P + + M C Q + RP
Sbjct: 236 ERPYWEMSNQDVIKAVDEGYRLPPPMDC---------PAALYQLM---LDCWQKDRNNRP 283
Query: 247 QMNQVIKMLTKNIR 260
+ Q++ +L K IR
Sbjct: 284 KFEQIVSILDKLIR 297
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 123/254 (48%), Gaps = 23/254 (9%)
Query: 10 IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L +++ R+F+ E + HPN++ L G + ++V EY+EN SLD
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 106
Query: 69 VLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 128
L K + + + + GIA G+ +L + VHRD+ A NIL++ K+
Sbjct: 107 FL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVS 160
Query: 129 DFGLAKLFPDNITHITTRIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS 186
DFGL+++ D+ T G + +PE + + T +DV+S+G+++ E++S
Sbjct: 161 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YG 218
Query: 187 GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRP 246
+ W N+ +++ + ++ P++ P + + M C Q + RP
Sbjct: 219 ERPYWEMSNQDVIKAVDEGYRLPPPMDC---------PAALYQLM---LDCWQKDRNNRP 266
Query: 247 QMNQVIKMLTKNIR 260
+ Q++ +L K IR
Sbjct: 267 KFEQIVSILDKLIR 280
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 122/254 (48%), Gaps = 23/254 (9%)
Query: 10 IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L +++ R+F+ E + HPN++ L G + ++V EY+EN SLD
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 69 VLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 128
L K + + + + GIA G+ +L + VHRD+ A NIL++ K+
Sbjct: 136 FL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVS 189
Query: 129 DFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS 186
DFGL ++ D+ T G + +PE + + T +DV+S+G+++ E++S
Sbjct: 190 DFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YG 247
Query: 187 GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRP 246
+ W N+ +++ + ++ P++ P + + M C Q + RP
Sbjct: 248 ERPYWEMSNQDVIKAVDEGYRLPPPMDC---------PAALYQLM---LDCWQKDRNNRP 295
Query: 247 QMNQVIKMLTKNIR 260
+ Q++ +L K IR
Sbjct: 296 KFEQIVSILDKLIR 309
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 90/182 (49%), Gaps = 7/182 (3%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
MGT R+A+K L F+ E + +RH LV+L V +V EY
Sbjct: 36 MGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEY 93
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ SL L G ++L + D+ IA G+A++ + VHRD+ A+NIL+
Sbjct: 94 MSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERM---NYVHRDLAAANILVG 148
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ K+ DFGLA+L DN + APE L G+ T+K+DV+SFG+L+ E+
Sbjct: 149 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 181 IS 182
+
Sbjct: 209 TT 210
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 6/182 (3%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
MG N ++AVK L + V+ F+ E + ++H LV L + ++ EY
Sbjct: 31 MGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEY 89
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ SL L + L K D IA+G+A++ + + +HRD++A+N+L+
Sbjct: 90 MAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVS 144
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ KI DFGLA++ DN + APE + G T+K+DV+SFG+L+ EI
Sbjct: 145 ESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEI 204
Query: 181 IS 182
++
Sbjct: 205 VT 206
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 7/182 (3%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
MGT R+A+K L F+ E + +RH LV+L V +V EY
Sbjct: 36 MGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVMEY 93
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ L L G ++L + D+ IA G+A++ + VHRD++A+NIL+
Sbjct: 94 MSKGCLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVG 148
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ K+ DFGLA+L DN + APE L G+ T+K+DV+SFG+L+ E+
Sbjct: 149 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 181 IS 182
+
Sbjct: 209 TT 210
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 7/182 (3%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
MGT R+A+K L F+ E + +RH LV+L V +V EY
Sbjct: 36 MGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEY 93
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ L L G ++L + D+ IA G+A++ + VHRD++A+NIL+
Sbjct: 94 MSKGCLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVG 148
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ K+ DFGLA+L DN + APE L G+ T+K+DV+SFG+L+ E+
Sbjct: 149 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 181 IS 182
+
Sbjct: 209 TT 210
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 13/185 (7%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
+G N ++A+K + E +FI E + + HP LV+L G C++ LV+E+
Sbjct: 28 LGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86
Query: 61 VENNSLD---RVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNI 117
+E+ L R G A L +C+ + +G+A+L E V +HRD+ A N
Sbjct: 87 MEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEEACV---IHRDLAARNC 137
Query: 118 LLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
L+ + K+ DFG+ + D+ +T + +PE + + K+DV+SFGVL+
Sbjct: 138 LVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 197
Query: 178 LEIIS 182
E+ S
Sbjct: 198 WEVFS 202
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 7 GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRR--ILVYEYVENN 64
G +AVK L +++ +R+F EI L +++H N+V+ G C RR L+ EY+
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SL L K +++ K I KG+ +L +HRD+ NIL++ E
Sbjct: 99 SLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 152
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
KIGDFGL K+ P + + G + + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 153 VKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 14/182 (7%)
Query: 7 GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRR--ILVYEYVENN 64
G +AVK L +++ +R+F EI L +++H N+V+ G C RR L+ EY+
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 65 SLDRVLLGATK--ANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQE 122
SL L + +IKL + S IC KG+ +L +HRD+ NIL++ E
Sbjct: 102 SLRDYLQAHAERIDHIKL-LQYTSQIC----KGMEYLG---TKRYIHRDLATRNILVENE 153
Query: 123 FNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEI 180
KIGDFGL K+ P + + G + + APE + + ++ +DV+SFGV++ E+
Sbjct: 154 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
Query: 181 IS 182
+
Sbjct: 214 FT 215
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 13/185 (7%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
+G N ++A+K + E +FI E + + HP LV+L G C++ LV+E+
Sbjct: 23 LGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 81
Query: 61 VENNSLD---RVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNI 117
+E+ L R G A L +C+ + +G+A+L E V +HRD+ A N
Sbjct: 82 MEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEEACV---IHRDLAARNC 132
Query: 118 LLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
L+ + K+ DFG+ + D+ +T + +PE + + K+DV+SFGVL+
Sbjct: 133 LVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 192
Query: 178 LEIIS 182
E+ S
Sbjct: 193 WEVFS 197
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 13/185 (7%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
+G N ++A+K + E +FI E + + HP LV+L G C++ LV+E+
Sbjct: 25 LGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 83
Query: 61 VENNSLD---RVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNI 117
+E+ L R G A L +C+ + +G+A+L E V +HRD+ A N
Sbjct: 84 MEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEEACV---IHRDLAARNC 134
Query: 118 LLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
L+ + K+ DFG+ + D+ +T + +PE + + K+DV+SFGVL+
Sbjct: 135 LVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 194
Query: 178 LEIIS 182
E+ S
Sbjct: 195 WEVFS 199
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 122/263 (46%), Gaps = 38/263 (14%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L + ++F E L+N++H ++V+ G C G I+V+EY+++ L++
Sbjct: 48 VAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKF 107
Query: 70 LLG------------ATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNI 117
L +A +L + I IA G+ +L + H VHRD+ N
Sbjct: 108 LRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNC 164
Query: 118 LLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT----GYLAPEYVLGGQLTMKADVYSF 173
L+ KIGDFG+++ D + R+ G T ++ PE ++ + T ++DV+SF
Sbjct: 165 LVGANLLVKIGDFGMSR---DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 221
Query: 174 GVLVLEIISGRNSGKAMWGQM-NKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMK 232
GV++ EI + GK W Q+ N ++E Q E+P P E+
Sbjct: 222 GVILWEIFT---YGKQPWFQLSNTEVIECITQGRVLERP---------RVCPKEV---YD 266
Query: 233 VAFFCTQAAASRRPQMNQVIKML 255
V C Q +R + ++ K+L
Sbjct: 267 VMLGCWQREPQQRLNIKEIYKIL 289
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 13/185 (7%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
+G N ++A+K + E +FI E + + HP LV+L G C++ LV+E+
Sbjct: 45 LGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 103
Query: 61 VENNSLD---RVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNI 117
+E+ L R G A L +C+ + +G+A+L E V +HRD+ A N
Sbjct: 104 MEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEEACV---IHRDLAARNC 154
Query: 118 LLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
L+ + K+ DFG+ + D+ +T + +PE + + K+DV+SFGVL+
Sbjct: 155 LVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 214
Query: 178 LEIIS 182
E+ S
Sbjct: 215 WEVFS 219
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 7 GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRR--ILVYEYVENN 64
G +AVK L +++ +R+F EI L +++H N+V+ G C RR L+ EY+
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 96
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SL L K +++ K I KG+ +L +HRD+ NIL++ E
Sbjct: 97 SLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 150
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
KIGDFGL K+ P + + G + + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 151 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 38/258 (14%)
Query: 7 GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL 66
G + +K L ++ R F+ E+ + + HPN+++ IG + R + EY++ +L
Sbjct: 35 GEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94
Query: 67 DRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK 126
++ + + W +R IA G+A+LH +I+HRD+ + N L+ + N
Sbjct: 95 RGII---KSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVV 148
Query: 127 IGDFGLAKLF---------------PDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVY 171
+ DFGLA+L PD T + G ++APE + G K DV+
Sbjct: 149 VADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT--VVGNPYWMAPEMINGRSYDEKVDVF 206
Query: 172 SFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEY-PPNEIIRY 230
SFG+++ EII N+ + F L V L Y PPN +
Sbjct: 207 SFGIVLCEIIGRVNADPDYLPRTMDFGLN--------------VRGFLDRYCPPNCPPSF 252
Query: 231 MKVAFFCTQAAASRRPQM 248
+ C +RP
Sbjct: 253 FPITVRCCDLDPEKRPSF 270
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 7/182 (3%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
MGT R+A+K L F+ E + +RH LV+L V +V EY
Sbjct: 203 MGTWNGTTRVAIKTLKP-GNMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEY 260
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ SL L G ++L + D+ IA G+A++ + VHRD++A+NIL+
Sbjct: 261 MSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVG 315
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ K+ DFGL +L DN + APE L G+ T+K+DV+SFG+L+ E+
Sbjct: 316 ENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 375
Query: 181 IS 182
+
Sbjct: 376 TT 377
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 7 GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRR--ILVYEYVENN 64
G +AVK L +++ +R+F EI L +++H N+V+ G C RR L+ EY+
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SL L K +++ K I KG+ +L +HRD+ NIL++ E
Sbjct: 99 SLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 152
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
KIGDFGL K+ P + + G + + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 7 GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRR--ILVYEYVENN 64
G +AVK L +++ +R+F EI L +++H N+V+ G C RR L+ EY+
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 97
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SL L K +++ K I KG+ +L +HRD+ NIL++ E
Sbjct: 98 SLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 151
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
KIGDFGL K+ P + + G + + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 152 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 7 GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRR--ILVYEYVENN 64
G +AVK L +++ +R+F EI L +++H N+V+ G C RR L+ EY+
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 129
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SL L K +++ K I KG+ +L +HRD+ NIL++ E
Sbjct: 130 SLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 183
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
KIGDFGL K+ P + + G + + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 184 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 7 GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRR--ILVYEYVENN 64
G +AVK L +++ +R+F EI L +++H N+V+ G C RR L+ EY+
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SL L K +++ K I KG+ +L +HRD+ NIL++ E
Sbjct: 99 SLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 152
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
KIGDFGL K+ P + + G + + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 13/185 (7%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
+G N ++A+K + E +FI E + + HP LV+L G C++ LV+E+
Sbjct: 25 LGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 83
Query: 61 VENNSLD---RVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNI 117
+E+ L R G A L +C+ + +G+A+L E ++HRD+ A N
Sbjct: 84 MEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEE---ASVIHRDLAARNC 134
Query: 118 LLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
L+ + K+ DFG+ + D+ +T + +PE + + K+DV+SFGVL+
Sbjct: 135 LVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 194
Query: 178 LEIIS 182
E+ S
Sbjct: 195 WEVFS 199
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 7 GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRR--ILVYEYVENN 64
G +AVK L +++ +R+F EI L +++H N+V+ G C RR L+ EY+
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 102
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SL L K +++ K I KG+ +L +HRD+ NIL++ E
Sbjct: 103 SLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 156
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
KIGDFGL K+ P + + G + + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 157 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 7 GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRR--ILVYEYVENN 64
G +AVK L +++ +R+F EI L +++H N+V+ G C RR L+ EY+
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 104
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SL L K +++ K I KG+ +L +HRD+ NIL++ E
Sbjct: 105 SLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 158
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
KIGDFGL K+ P + + G + + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 159 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 7 GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRR--ILVYEYVENN 64
G +AVK L +++ +R+F EI L +++H N+V+ G C RR L+ EY+
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SL L K +++ K I KG+ +L +HRD+ NIL++ E
Sbjct: 102 SLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 155
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
KIGDFGL K+ P + + G + + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 7 GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRR--ILVYEYVENN 64
G +AVK L +++ +R+F EI L +++H N+V+ G C RR L+ EY+
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 103
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SL L K +++ K I KG+ +L +HRD+ NIL++ E
Sbjct: 104 SLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 157
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
KIGDFGL K+ P + + G + + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 158 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 7 GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRR--ILVYEYVENN 64
G +AVK L +++ +R+F EI L +++H N+V+ G C RR L+ EY+
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SL L K +++ K I KG+ +L +HRD+ NIL++ E
Sbjct: 117 SLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 170
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
KIGDFGL K+ P + + G + + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 7 GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRR--ILVYEYVENN 64
G +AVK L +++ +R+F EI L +++H N+V+ G C RR L+ EY+
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SL L K +++ K I KG+ +L +HRD+ NIL++ E
Sbjct: 117 SLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 170
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
KIGDFGL K+ P + + G + + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 7 GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRR--ILVYEYVENN 64
G +AVK L +++ +R+F EI L +++H N+V+ G C RR L+ EY+
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 105
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SL L K +++ K I KG+ +L +HRD+ NIL++ E
Sbjct: 106 SLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 159
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
KIGDFGL K+ P + + G + + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 160 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 94/180 (52%), Gaps = 10/180 (5%)
Query: 7 GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRR--ILVYEYVENN 64
G +AVK L +++ +R+F EI L +++H N+V+ G C RR L+ EY+
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 99
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SL L K +++ K I KG+ +L +HR++ NIL++ E
Sbjct: 100 SLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRNLATRNILVENENR 153
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
KIGDFGL K+ P + + + G + + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 154 VKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 96/178 (53%), Gaps = 9/178 (5%)
Query: 6 NGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNS 65
+GR++AVK + +Q E++ + + +H N+VE+ + G ++ E+++ +
Sbjct: 69 SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128
Query: 66 LDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 125
L ++ + ++LN E+ + +C + + LA+LH + ++HRDIK+ +ILL +
Sbjct: 129 LTDIV-----SQVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRV 180
Query: 126 KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
K+ DFG ++ + GT ++APE + + D++S G++V+E++ G
Sbjct: 181 KLSDFGFCAQISKDVPK-RKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 18/198 (9%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L S+ ++F E L+ ++H ++V G C +G ++V+EY+ + L+R
Sbjct: 51 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 110
Query: 70 LL-----------GATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNIL 118
L G A L + + +A G+ +L H VHRD+ N L
Sbjct: 111 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCL 167
Query: 119 LDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
+ Q KIGDFG+++ ++ + + R ++ PE +L + T ++DV+SFGV++
Sbjct: 168 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 227
Query: 178 LEIISGRNSGKAMWGQMN 195
EI + GK W Q++
Sbjct: 228 WEIFT---YGKQPWYQLS 242
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 122/254 (48%), Gaps = 23/254 (9%)
Query: 10 IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L +++ R+F+ E + HPN++ L G + ++V E +EN SLD
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 69 VLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 128
L K + + + + GIA G+ +L + VHRD+ A NIL++ K+
Sbjct: 136 FL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVS 189
Query: 129 DFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS 186
DFGL+++ D+ T G + +PE + + T +DV+S+G+++ E++S
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YG 247
Query: 187 GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRP 246
+ W N+ +++ + ++ P++ P + + M C Q + RP
Sbjct: 248 ERPYWEMSNQDVIKAVDEGYRLPPPMDC---------PAALYQLM---LDCWQKDRNNRP 295
Query: 247 QMNQVIKMLTKNIR 260
+ Q++ +L K IR
Sbjct: 296 KFEQIVSILDKLIR 309
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 7 GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRR--ILVYEYVENN 64
G +AVK L +++ +R+F EI L +++H N+V+ G C RR L+ E++
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYG 101
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SL L K +++ K I KG+ +L +HRD+ NIL++ E
Sbjct: 102 SLREYL---QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 155
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
KIGDFGL K+ P + + G + + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 18/198 (9%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L S+ ++F E L+ ++H ++V G C +G ++V+EY+ + L+R
Sbjct: 45 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 104
Query: 70 LL-----------GATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNIL 118
L G A L + + +A G+ +L H VHRD+ N L
Sbjct: 105 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCL 161
Query: 119 LDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
+ Q KIGDFG+++ ++ + + R ++ PE +L + T ++DV+SFGV++
Sbjct: 162 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 221
Query: 178 LEIISGRNSGKAMWGQMN 195
EI + GK W Q++
Sbjct: 222 WEIFT---YGKQPWYQLS 236
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 13/185 (7%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
+G N ++A+K + E +FI E + + HP LV+L G C++ LV E+
Sbjct: 26 LGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84
Query: 61 VENNSLD---RVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNI 117
+E+ L R G A L +C+ + +G+A+L E V +HRD+ A N
Sbjct: 85 MEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEEACV---IHRDLAARNC 135
Query: 118 LLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
L+ + K+ DFG+ + D+ +T + +PE + + K+DV+SFGVL+
Sbjct: 136 LVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 195
Query: 178 LEIIS 182
E+ S
Sbjct: 196 WEVFS 200
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 18/198 (9%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L S+ ++F E L+ ++H ++V G C +G ++V+EY+ + L+R
Sbjct: 74 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 133
Query: 70 LL-----------GATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNIL 118
L G A L + + +A G+ +L H VHRD+ N L
Sbjct: 134 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCL 190
Query: 119 LDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
+ Q KIGDFG+++ ++ + + R ++ PE +L + T ++DV+SFGV++
Sbjct: 191 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 250
Query: 178 LEIISGRNSGKAMWGQMN 195
EI + GK W Q++
Sbjct: 251 WEIFT---YGKQPWYQLS 265
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 122/254 (48%), Gaps = 23/254 (9%)
Query: 10 IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L +++ R+F+ E + HPN++ L G + ++V E +EN SLD
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 69 VLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 128
L K + + + + GIA G+ +L + VHRD+ A NIL++ K+
Sbjct: 136 FL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GAVHRDLAARNILINSNLVCKVS 189
Query: 129 DFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS 186
DFGL+++ D+ T G + +PE + + T +DV+S+G+++ E++S
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YG 247
Query: 187 GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRP 246
+ W N+ +++ + ++ P++ P + + M C Q + RP
Sbjct: 248 ERPYWEMSNQDVIKAVDEGYRLPPPMDC---------PAALYQLM---LDCWQKDRNNRP 295
Query: 247 QMNQVIKMLTKNIR 260
+ Q++ +L K IR
Sbjct: 296 KFEQIVSILDKLIR 309
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 122/254 (48%), Gaps = 23/254 (9%)
Query: 10 IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L +++ R+F+ E + HPN++ L G + ++V E +EN SLD
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 106
Query: 69 VLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 128
L K + + + + GIA G+ +L + VHRD+ A NIL++ K+
Sbjct: 107 FL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVS 160
Query: 129 DFGLAKLFPDNITHITTRIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS 186
DFGL+++ D+ T G + +PE + + T +DV+S+G+++ E++S
Sbjct: 161 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YG 218
Query: 187 GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRP 246
+ W N+ +++ + ++ P++ P + + M C Q + RP
Sbjct: 219 ERPYWEMSNQDVIKAVDEGYRLPPPMDC---------PAALYQLM---LDCWQKDRNNRP 266
Query: 247 QMNQVIKMLTKNIR 260
+ Q++ +L K IR
Sbjct: 267 KFEQIVSILDKLIR 280
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 33/266 (12%)
Query: 2 GTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPNLVELIGCCVQGTRR-I 55
GTL +G++I AVK L+ + G V +F+TE + + + HPN++ L+G C++ +
Sbjct: 108 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 167
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIK 113
+V Y+++ L + T N + I G +AKG+ FL + VHRD+
Sbjct: 168 VVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLA 219
Query: 114 ASNILLDQEFNPKIGDFGLAKLFPD---NITHITTRIAGTTGYLAPEYVLGGQLTMKADV 170
A N +LD++F K+ DFGLA+ D + H T ++A E + + T K+DV
Sbjct: 220 ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 279
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ E+++ G + +N F + L Q + L+ P EY P+ +
Sbjct: 280 WSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRR---LLQP---EYCPDPLYEV 328
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLT 256
M C A RP ++++ ++
Sbjct: 329 M---LKCWHPKAEMRPSFSELVSRIS 351
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 6/182 (3%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
MG N ++AVK L + V+ F+ E + ++H LV L + ++ E+
Sbjct: 30 MGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEF 88
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ SL L + L K D IA+G+A++ + + +HRD++A+N+L+
Sbjct: 89 MAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVS 143
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ KI DFGLA++ DN + APE + G T+K++V+SFG+L+ EI
Sbjct: 144 ESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEI 203
Query: 181 IS 182
++
Sbjct: 204 VT 205
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 14/181 (7%)
Query: 6 NGRRIAVKPLSAE---SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVE 62
NGR A+K L E + V E + LS V HP ++ + G + ++ +Y+E
Sbjct: 30 NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIE 89
Query: 63 NNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQE 122
L +L + + + +++C+ L +LH + I++RD+K NILLD+
Sbjct: 90 GGELFSLLRKSQRFPNPVAKFYAAEVCLA----LEYLHSK---DIIYRDLKPENILLDKN 142
Query: 123 FNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
+ KI DFG AK PD +T + GT Y+APE V D +SFG+L+ E+++
Sbjct: 143 GHIKITDFGFAKYVPD----VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLA 198
Query: 183 G 183
G
Sbjct: 199 G 199
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 8/185 (4%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
M T ++AVK + S V F+ E + ++H LV+L + I+ E+
Sbjct: 33 MATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIIT-EF 90
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ SL L + L K D IA+G+AF+ + + +HRD++A+NIL+
Sbjct: 91 MAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVS 145
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
KI DFGLA++ DN + APE + G T+K+DV+SFG+L++EI
Sbjct: 146 ASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 205
Query: 181 IS-GR 184
++ GR
Sbjct: 206 VTYGR 210
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 33/266 (12%)
Query: 2 GTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPNLVELIGCCVQGTRR-I 55
GTL +G++I AVK L+ + G V +F+TE + + + HPN++ L+G C++ +
Sbjct: 50 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 109
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIK 113
+V Y+++ L + T N + I G +AKG+ FL + VHRD+
Sbjct: 110 VVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLA 161
Query: 114 ASNILLDQEFNPKIGDFGLAKLFPD---NITHITTRIAGTTGYLAPEYVLGGQLTMKADV 170
A N +LD++F K+ DFGLA+ D + H T ++A E + + T K+DV
Sbjct: 162 ARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 221
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ E+++ G + +N F + L Q + L+ P EY P+ +
Sbjct: 222 WSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRR---LLQP---EYCPDPLYEV 270
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLT 256
M C A RP ++++ ++
Sbjct: 271 M---LKCWHPKAEMRPSFSELVSRIS 293
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 125/261 (47%), Gaps = 35/261 (13%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L +++ REF++E + HPN++ L G +++ E++EN +LD
Sbjct: 45 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 104
Query: 69 VLLGATKANIKLNWEKRSDICV-----GIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
L +LN + + I + GIA G+ +L E VHRD+ A NIL++
Sbjct: 105 FL--------RLNDGQFTVIQLVGMLRGIASGMRYLAEM---SYVHRDLAARNILVNSNL 153
Query: 124 NPKIGDFGLAKLFPDNITH--ITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLE 179
K+ DFGL++ +N + T+ + G + APE + + T +D +S+G+++ E
Sbjct: 154 VCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWE 213
Query: 180 IISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQ 239
++S + W N+ ++ + Q+ + + P PP+ ++ C Q
Sbjct: 214 VMS--FGERPYWDMSNQDVIN---AIEQDYR----LPP-----PPDCPTSLHQLMLDCWQ 259
Query: 240 AAASRRPQMNQVIKMLTKNIR 260
+ RP+ QV+ L K IR
Sbjct: 260 KDRNARPRFPQVVSALDKMIR 280
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 33/266 (12%)
Query: 2 GTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPNLVELIGCCVQGTRR-I 55
GTL +G++I AVK L+ + G V +F+TE + + + HPN++ L+G C++ +
Sbjct: 54 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 113
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIK 113
+V Y+++ L + T N + I G +AKG+ FL + VHRD+
Sbjct: 114 VVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLA 165
Query: 114 ASNILLDQEFNPKIGDFGLAKLFPD---NITHITTRIAGTTGYLAPEYVLGGQLTMKADV 170
A N +LD++F K+ DFGLA+ D + H T ++A E + + T K+DV
Sbjct: 166 ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 225
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ E+++ G + +N F + L Q + L+ P EY P+ +
Sbjct: 226 WSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRR---LLQP---EYCPDPLYEV 274
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLT 256
M C A RP ++++ ++
Sbjct: 275 M---LKCWHPKAEMRPSFSELVSRIS 297
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 33/266 (12%)
Query: 2 GTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPNLVELIGCCVQGTRR-I 55
GTL +G++I AVK L+ + G V +F+TE + + + HPN++ L+G C++ +
Sbjct: 47 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 106
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIK 113
+V Y+++ L + T N + I G +AKG+ FL + VHRD+
Sbjct: 107 VVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLA 158
Query: 114 ASNILLDQEFNPKIGDFGLAKLFPD---NITHITTRIAGTTGYLAPEYVLGGQLTMKADV 170
A N +LD++F K+ DFGLA+ D + H T ++A E + + T K+DV
Sbjct: 159 ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 218
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ E+++ G + +N F + L Q + L+ P EY P+ +
Sbjct: 219 WSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRR---LLQP---EYCPDPLYEV 267
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLT 256
M C A RP ++++ ++
Sbjct: 268 M---LKCWHPKAEMRPSFSELVSRIS 290
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 33/266 (12%)
Query: 2 GTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPNLVELIGCCVQGTRR-I 55
GTL +G++I AVK L+ + G V +F+TE + + + HPN++ L+G C++ +
Sbjct: 49 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 108
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIK 113
+V Y+++ L + T N + I G +AKG+ FL + VHRD+
Sbjct: 109 VVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLA 160
Query: 114 ASNILLDQEFNPKIGDFGLAKLFPD---NITHITTRIAGTTGYLAPEYVLGGQLTMKADV 170
A N +LD++F K+ DFGLA+ D + H T ++A E + + T K+DV
Sbjct: 161 ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 220
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ E+++ G + +N F + L Q + L+ P EY P+ +
Sbjct: 221 WSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRR---LLQP---EYCPDPLYEV 269
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLT 256
M C A RP ++++ ++
Sbjct: 270 M---LKCWHPKAEMRPSFSELVSRIS 292
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 33/266 (12%)
Query: 2 GTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPNLVELIGCCVQGTRR-I 55
GTL +G++I AVK L+ + G V +F+TE + + + HPN++ L+G C++ +
Sbjct: 49 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 108
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIK 113
+V Y+++ L + T N + I G +AKG+ FL + VHRD+
Sbjct: 109 VVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLA 160
Query: 114 ASNILLDQEFNPKIGDFGLAKLFPD---NITHITTRIAGTTGYLAPEYVLGGQLTMKADV 170
A N +LD++F K+ DFGLA+ D + H T ++A E + + T K+DV
Sbjct: 161 ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 220
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ E+++ G + +N F + L Q + L+ P EY P+ +
Sbjct: 221 WSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRR---LLQP---EYCPDPLYEV 269
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLT 256
M C A RP ++++ ++
Sbjct: 270 M---LKCWHPKAEMRPSFSELVSRIS 292
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 33/266 (12%)
Query: 2 GTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPNLVELIGCCVQGTRR-I 55
GTL +G++I AVK L+ + G V +F+TE + + + HPN++ L+G C++ +
Sbjct: 50 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 109
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIK 113
+V Y+++ L + T N + I G +AKG+ FL + VHRD+
Sbjct: 110 VVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLA 161
Query: 114 ASNILLDQEFNPKIGDFGLAKLFPD---NITHITTRIAGTTGYLAPEYVLGGQLTMKADV 170
A N +LD++F K+ DFGLA+ D + H T ++A E + + T K+DV
Sbjct: 162 ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 221
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ E+++ G + +N F + L Q + L+ P EY P+ +
Sbjct: 222 WSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRR---LLQP---EYCPDPLYEV 270
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLT 256
M C A RP ++++ ++
Sbjct: 271 M---LKCWHPKAEMRPSFSELVSRIS 293
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 124/270 (45%), Gaps = 43/270 (15%)
Query: 6 NGRRIAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVELIGCCV-QGTRRI-LVYEYVE 62
G +AVK L A+ R + EI L + H ++++ GCC QG + + LV EYV
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 63 NNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQE 122
SL L + +L + I +G+A+LH + H +HR++ A N+LLD +
Sbjct: 102 LGSLRDYLPRHSIGLAQLLLFAQQ-----ICEGMAYLHSQ---HYIHRNLAARNVLLDND 153
Query: 123 FNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEI 180
KIGDFGLAK P+ + R G + + APE + + +DV+SFGV + E+
Sbjct: 154 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213
Query: 181 ISGRNSGKA-----------MWGQMNKF----LLEWAWQLHQEEKPLELVDPELGEYPPN 225
++ +S ++ GQM LLE +L + +K P
Sbjct: 214 LTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDK------------CPC 261
Query: 226 EIIRYMKVAFFCTQAAASRRPQMNQVIKML 255
E+ MK C + AS RP +I +L
Sbjct: 262 EVYHLMKN---CWETEASFRPTFENLIPIL 288
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 18/181 (9%)
Query: 6 NGRRIAVKPLSAESKQG---VREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVE 62
N +A+K +S KQ ++ I E+ L +RHPN ++ GC ++ LV EY
Sbjct: 78 NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL 137
Query: 63 NNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQE 122
++ D LL K L + + + G +GLA+LH +++HRD+KA NILL +
Sbjct: 138 GSASD--LLEVHKK--PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEP 190
Query: 123 FNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLG---GQLTMKADVYSFGVLVLE 179
K+GDFG A +I GT ++APE +L GQ K DV+S G+ +E
Sbjct: 191 GLVKLGDFGSA-----SIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 245
Query: 180 I 180
+
Sbjct: 246 L 246
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 101/185 (54%), Gaps = 11/185 (5%)
Query: 5 TNGRRIAVKPLSAESKQGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
T G +A+K + +S++G I EI + ++H N+V L + LV+E+++N
Sbjct: 28 TTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN 87
Query: 64 N---SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ +D +G T ++LN K + +GLAF HE I+HRD+K N+L++
Sbjct: 88 DLKKYMDSRTVGNTPRGLELNLVKY--FQWQLLQGLAFCHEN---KILHRDLKPQNLLIN 142
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLE 179
+ K+GDFGLA+ F + ++ + T Y AP+ ++G + + D++S G ++ E
Sbjct: 143 KRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAPDVLMGSRTYSTSIDIWSCGCILAE 201
Query: 180 IISGR 184
+I+G+
Sbjct: 202 MITGK 206
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 18/181 (9%)
Query: 6 NGRRIAVKPLSAESKQG---VREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVE 62
N +A+K +S KQ ++ I E+ L +RHPN ++ GC ++ LV EY
Sbjct: 39 NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL 98
Query: 63 NNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQE 122
++ D LL K L + + + G +GLA+LH +++HRD+KA NILL +
Sbjct: 99 GSASD--LLEVHKK--PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEP 151
Query: 123 FNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLG---GQLTMKADVYSFGVLVLE 179
K+GDFG A +I GT ++APE +L GQ K DV+S G+ +E
Sbjct: 152 GLVKLGDFGSA-----SIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 206
Query: 180 I 180
+
Sbjct: 207 L 207
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 124/270 (45%), Gaps = 43/270 (15%)
Query: 6 NGRRIAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVELIGCCV-QGTRRI-LVYEYVE 62
G +AVK L A+ R + EI L + H ++++ GCC QG + + LV EYV
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 63 NNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQE 122
SL L + +L + I +G+A+LH + H +HR++ A N+LLD +
Sbjct: 102 LGSLRDYLPRHSIGLAQLLLFAQQ-----ICEGMAYLHAQ---HYIHRNLAARNVLLDND 153
Query: 123 FNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEI 180
KIGDFGLAK P+ + R G + + APE + + +DV+SFGV + E+
Sbjct: 154 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213
Query: 181 ISGRNSGKA-----------MWGQMNKF----LLEWAWQLHQEEKPLELVDPELGEYPPN 225
++ +S ++ GQM LLE +L + +K P
Sbjct: 214 LTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDK------------CPC 261
Query: 226 EIIRYMKVAFFCTQAAASRRPQMNQVIKML 255
E+ MK C + AS RP +I +L
Sbjct: 262 EVYHLMKN---CWETEASFRPTFENLIPIL 288
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 124/261 (47%), Gaps = 35/261 (13%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L +++ REF++E + HPN++ L G +++ E++EN +LD
Sbjct: 47 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 106
Query: 69 VLLGATKANIKLNWEKRSDICV-----GIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
L +LN + + I + GIA G+ +L E VHRD+ A NIL++
Sbjct: 107 FL--------RLNDGQFTVIQLVGMLRGIASGMRYLAEM---SYVHRDLAARNILVNSNL 155
Query: 124 NPKIGDFGLAKLFPDNITHI--TTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLE 179
K+ DFGL++ +N + T+ + G + APE + + T +D +S+G+++ E
Sbjct: 156 VCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWE 215
Query: 180 IISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQ 239
++S + W N+ ++ Q ++ + P PP+ ++ C Q
Sbjct: 216 VMS--FGERPYWDMSNQDVINAIEQDYR-------LPP-----PPDCPTSLHQLMLDCWQ 261
Query: 240 AAASRRPQMNQVIKMLTKNIR 260
+ RP+ QV+ L K IR
Sbjct: 262 KDRNARPRFPQVVSALDKMIR 282
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 93/178 (52%), Gaps = 9/178 (5%)
Query: 6 NGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNS 65
G+++AVK + +Q E++ + + H N+V++ + G +V E++E +
Sbjct: 69 TGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGA 128
Query: 66 LDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 125
L ++ + ++N E+ + +C+ + + L++LH + ++HRDIK+ +ILL +
Sbjct: 129 LTDIV-----THTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRI 180
Query: 126 KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
K+ DFG + + GT ++APE + + D++S G++V+E+I G
Sbjct: 181 KLSDFGFCAQVSKEVPK-RKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 10/195 (5%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
MGT ++A+K L + F+ E + ++H LV+L + I V EY
Sbjct: 27 MGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLVQLYAVVSEEPIYI-VTEY 84
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ SL L +KL D+ +A G+A++ + +HRD++++NIL+
Sbjct: 85 MNKGSLLDFLKDGEGRALKL--PNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVG 139
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
KI DFGLA+L DN + APE L G+ T+K+DV+SFG+L+ E+
Sbjct: 140 NGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 199
Query: 181 ISGRNSGKAMWGQMN 195
++ G+ + MN
Sbjct: 200 VT---KGRVPYPGMN 211
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 91/182 (50%), Gaps = 7/182 (3%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
M T ++AVK + S V F+ E + ++H LV+L + I+ E+
Sbjct: 206 MATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIIT-EF 263
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ SL L + L K D IA+G+AF+ + + +HRD++A+NIL+
Sbjct: 264 MAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVS 318
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
KI DFGLA++ DN + APE + G T+K+DV+SFG+L++EI
Sbjct: 319 ASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 378
Query: 181 IS 182
++
Sbjct: 379 VT 380
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 11/184 (5%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
+G +AVK + E EF E T+ + HP LV+ G C + +V EY
Sbjct: 26 LGKWKGQYDVAVK-MIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ N L L K L + ++C + +G+AFL +HRD+ A N L+D
Sbjct: 85 ISNGCLLNYLRSHGKG---LEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVD 138
Query: 121 QEFNPKIGDFGLAKLFPDN--ITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVL 178
++ K+ DFG+ + D+ ++ + T+ + APE + + K+DV++FG+L+
Sbjct: 139 RDLCVKVSDFGMTRYVLDDQYVSSVGTKFP--VKWSAPEVFHYFKYSSKSDVWAFGILMW 196
Query: 179 EIIS 182
E+ S
Sbjct: 197 EVFS 200
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 132/266 (49%), Gaps = 33/266 (12%)
Query: 2 GTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPNLVELIGCCVQGTRR-I 55
GTL +G++I AVK L+ + G V +F+TE + + + HPN++ L+G C++ +
Sbjct: 49 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 108
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIK 113
+V Y+++ L + T N + I G +AKG+ +L + VHRD+
Sbjct: 109 VVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLA 160
Query: 114 ASNILLDQEFNPKIGDFGLAKLFPDN---ITHITTRIAGTTGYLAPEYVLGGQLTMKADV 170
A N +LD++F K+ DFGLA+ D H T ++A E + + T K+DV
Sbjct: 161 ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 220
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ E+++ G + +N F + L Q + L+ P EY P+ +
Sbjct: 221 WSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRR---LLQP---EYCPDPL--- 266
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLT 256
+V C A RP ++++ ++
Sbjct: 267 YEVMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 132/266 (49%), Gaps = 33/266 (12%)
Query: 2 GTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPNLVELIGCCVQGTRR-I 55
GTL +G++I AVK L+ + G V +F+TE + + + HPN++ L+G C++ +
Sbjct: 41 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 100
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIK 113
+V Y+++ L + T N + I G +AKG+ +L + VHRD+
Sbjct: 101 VVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLA 152
Query: 114 ASNILLDQEFNPKIGDFGLAKLFPDN---ITHITTRIAGTTGYLAPEYVLGGQLTMKADV 170
A N +LD++F K+ DFGLA+ D H T ++A E + + T K+DV
Sbjct: 153 ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 212
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ E+++ G + +N F + L Q + L+ P EY P+ +
Sbjct: 213 WSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRR---LLQP---EYCPDPL--- 258
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLT 256
+V C A RP ++++ ++
Sbjct: 259 YEVMLKCWHPKAEMRPSFSELVSRIS 284
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 132/266 (49%), Gaps = 33/266 (12%)
Query: 2 GTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPNLVELIGCCVQGT-RRI 55
GTL +G++I AVK L+ + G V +F+TE + + + HPN++ L+G C++ +
Sbjct: 68 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 127
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIK 113
+V Y+++ L + T N + I G +AKG+ +L + VHRD+
Sbjct: 128 VVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLA 179
Query: 114 ASNILLDQEFNPKIGDFGLAKLFPDN---ITHITTRIAGTTGYLAPEYVLGGQLTMKADV 170
A N +LD++F K+ DFGLA+ D H T ++A E + + T K+DV
Sbjct: 180 ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 239
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ E+++ G + +N F + L Q + L+ P EY P+ +
Sbjct: 240 WSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRR---LLQP---EYCPDPL--- 285
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLT 256
+V C A RP ++++ ++
Sbjct: 286 YEVMLKCWHPKAEMRPSFSELVSRIS 311
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 131/266 (49%), Gaps = 33/266 (12%)
Query: 2 GTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPNLVELIGCCVQGTRR-I 55
GTL +G++I AVK L+ + G V +F+TE + + + HPN++ L+G C++ +
Sbjct: 48 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 107
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIK 113
+V Y+++ L + T N + I G +AKG+ +L + VHRD+
Sbjct: 108 VVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLA 159
Query: 114 ASNILLDQEFNPKIGDFGLAKLFPDN---ITHITTRIAGTTGYLAPEYVLGGQLTMKADV 170
A N +LD++F K+ DFGLA+ D H T ++A E + + T K+DV
Sbjct: 160 ARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 219
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ E+++ G + +N F + L Q + L+ P EY P+ +
Sbjct: 220 WSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRR---LLQP---EYCPDPLYEV 268
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLT 256
M C A RP ++++ ++
Sbjct: 269 M---LKCWHPKAEMRPSFSELVSRIS 291
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 132/266 (49%), Gaps = 33/266 (12%)
Query: 2 GTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPNLVELIGCCVQGTRR-I 55
GTL +G++I AVK L+ + G V +F+TE + + + HPN++ L+G C++ +
Sbjct: 67 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 126
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIK 113
+V Y+++ L + T N + I G +AKG+ +L + VHRD+
Sbjct: 127 VVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLA 178
Query: 114 ASNILLDQEFNPKIGDFGLAKLFPDN---ITHITTRIAGTTGYLAPEYVLGGQLTMKADV 170
A N +LD++F K+ DFGLA+ D H T ++A E + + T K+DV
Sbjct: 179 ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 238
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ E+++ G + +N F + L Q + L+ P EY P+ +
Sbjct: 239 WSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRR---LLQP---EYCPDPL--- 284
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLT 256
+V C A RP ++++ ++
Sbjct: 285 YEVMLKCWHPKAEMRPSFSELVSRIS 310
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 132/266 (49%), Gaps = 33/266 (12%)
Query: 2 GTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPNLVELIGCCVQGTRR-I 55
GTL +G++I AVK L+ + G V +F+TE + + + HPN++ L+G C++ +
Sbjct: 48 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 107
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIK 113
+V Y+++ L + T N + I G +AKG+ +L + VHRD+
Sbjct: 108 VVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLA 159
Query: 114 ASNILLDQEFNPKIGDFGLAKLFPDN---ITHITTRIAGTTGYLAPEYVLGGQLTMKADV 170
A N +LD++F K+ DFGLA+ D H T ++A E + + T K+DV
Sbjct: 160 ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 219
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ E+++ G + +N F + L Q + L+ P EY P+ +
Sbjct: 220 WSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRR---LLQP---EYCPDPL--- 265
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLT 256
+V C A RP ++++ ++
Sbjct: 266 YEVMLKCWHPKAEMRPSFSELVSRIS 291
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 132/266 (49%), Gaps = 33/266 (12%)
Query: 2 GTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPNLVELIGCCVQGTRR-I 55
GTL +G++I AVK L+ + G V +F+TE + + + HPN++ L+G C++ +
Sbjct: 46 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 105
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIK 113
+V Y+++ L + T N + I G +AKG+ +L + VHRD+
Sbjct: 106 VVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLA 157
Query: 114 ASNILLDQEFNPKIGDFGLAKLFPDN---ITHITTRIAGTTGYLAPEYVLGGQLTMKADV 170
A N +LD++F K+ DFGLA+ D H T ++A E + + T K+DV
Sbjct: 158 ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 217
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ E+++ G + +N F + L Q + L+ P EY P+ +
Sbjct: 218 WSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRR---LLQP---EYCPDPL--- 263
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLT 256
+V C A RP ++++ ++
Sbjct: 264 YEVMLKCWHPKAEMRPSFSELVSRIS 289
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 132/266 (49%), Gaps = 33/266 (12%)
Query: 2 GTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPNLVELIGCCVQGTRR-I 55
GTL +G++I AVK L+ + G V +F+TE + + + HPN++ L+G C++ +
Sbjct: 49 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 108
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIK 113
+V Y+++ L + T N + I G +AKG+ +L + VHRD+
Sbjct: 109 VVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLA 160
Query: 114 ASNILLDQEFNPKIGDFGLAKLFPDN---ITHITTRIAGTTGYLAPEYVLGGQLTMKADV 170
A N +LD++F K+ DFGLA+ D H T ++A E + + T K+DV
Sbjct: 161 ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 220
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ E+++ G + +N F + L Q + L+ P EY P+ +
Sbjct: 221 WSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRR---LLQP---EYCPDPL--- 266
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLT 256
+V C A RP ++++ ++
Sbjct: 267 YEVMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 132/266 (49%), Gaps = 33/266 (12%)
Query: 2 GTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPNLVELIGCCVQGTRR-I 55
GTL +G++I AVK L+ + G V +F+TE + + + HPN++ L+G C++ +
Sbjct: 47 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 106
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIK 113
+V Y+++ L + T N + I G +AKG+ +L + VHRD+
Sbjct: 107 VVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLA 158
Query: 114 ASNILLDQEFNPKIGDFGLAKLFPDN---ITHITTRIAGTTGYLAPEYVLGGQLTMKADV 170
A N +LD++F K+ DFGLA+ D H T ++A E + + T K+DV
Sbjct: 159 ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 218
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ E+++ G + +N F + L Q + L+ P EY P+ +
Sbjct: 219 WSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRR---LLQP---EYCPDPL--- 264
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLT 256
+V C A RP ++++ ++
Sbjct: 265 YEVMLKCWHPKAEMRPSFSELVSRIS 290
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 94/179 (52%), Gaps = 9/179 (5%)
Query: 5 TNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
++G+ +AVK + +Q E++ + + +H N+VE+ + G +V E++E
Sbjct: 52 SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 111
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+L ++ + ++N E+ + +C+ + + L+ LH + ++HRDIK+ +ILL +
Sbjct: 112 ALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGR 163
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
K+ DFG + + GT ++APE + + D++S G++V+E++ G
Sbjct: 164 VKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 107/193 (55%), Gaps = 16/193 (8%)
Query: 1 MGTLTNGR---RIAVKPL--SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI 55
GT+ G+ +AVK L +A + Q ++ F E+ L RH N++ +G + +
Sbjct: 25 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLA 83
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 115
+V ++ E +SL L + K +K DI A+G+ +LH + I+HRD+K++
Sbjct: 84 IVTQWCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSN 137
Query: 116 NILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTTGYLAPEYVL---GGQLTMKADVY 171
NI L ++ KIGDFGLA + + +H +++G+ ++APE + + ++DVY
Sbjct: 138 NIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVY 197
Query: 172 SFGVLVLEIISGR 184
+FG+++ E+++G+
Sbjct: 198 AFGIVLYELMTGQ 210
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 94/179 (52%), Gaps = 9/179 (5%)
Query: 5 TNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
++G+ +AVK + +Q E++ + + +H N+VE+ + G +V E++E
Sbjct: 43 SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 102
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+L ++ + ++N E+ + +C+ + + L+ LH + ++HRDIK+ +ILL +
Sbjct: 103 ALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGR 154
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
K+ DFG + + GT ++APE + + D++S G++V+E++ G
Sbjct: 155 VKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 132/266 (49%), Gaps = 33/266 (12%)
Query: 2 GTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPNLVELIGCCVQGTRR-I 55
GTL +G++I AVK L+ + G V +F+TE + + + HPN++ L+G C++ +
Sbjct: 44 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIK 113
+V Y+++ L + T N + I G +AKG+ +L + VHRD+
Sbjct: 104 VVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLA 155
Query: 114 ASNILLDQEFNPKIGDFGLAKLFPDN---ITHITTRIAGTTGYLAPEYVLGGQLTMKADV 170
A N +LD++F K+ DFGLA+ D H T ++A E + + T K+DV
Sbjct: 156 ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 215
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ E+++ G + +N F + L Q + L+ P EY P+ +
Sbjct: 216 WSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRR---LLQP---EYCPDPL--- 261
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLT 256
+V C A RP ++++ ++
Sbjct: 262 YEVMLKCWHPKAEMRPSFSELVSRIS 287
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 94/179 (52%), Gaps = 9/179 (5%)
Query: 5 TNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
++G+ +AVK + +Q E++ + + +H N+VE+ + G +V E++E
Sbjct: 47 SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 106
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+L ++ + ++N E+ + +C+ + + L+ LH + ++HRDIK+ +ILL +
Sbjct: 107 ALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGR 158
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
K+ DFG + + GT ++APE + + D++S G++V+E++ G
Sbjct: 159 VKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 94/179 (52%), Gaps = 9/179 (5%)
Query: 5 TNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
++G+ +AVK + +Q E++ + + +H N+VE+ + G +V E++E
Sbjct: 54 SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 113
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+L ++ + ++N E+ + +C+ + + L+ LH + ++HRDIK+ +ILL +
Sbjct: 114 ALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGR 165
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
K+ DFG + + GT ++APE + + D++S G++V+E++ G
Sbjct: 166 VKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 120/270 (44%), Gaps = 43/270 (15%)
Query: 6 NGRRIAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVELIGCC--VQGTRRILVYEYVE 62
G +AVK L A++ R + EI L + H ++++ GCC LV EYV
Sbjct: 59 TGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVP 118
Query: 63 NNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQE 122
SL L + +L + I +G+A+LH + H +HRD+ A N+LLD +
Sbjct: 119 LGSLRDYLPRHSIGLAQLLLFAQQ-----ICEGMAYLHAQ---HYIHRDLAARNVLLDND 170
Query: 123 FNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEI 180
KIGDFGLAK P+ R G + + APE + + +DV+SFGV + E+
Sbjct: 171 RLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 230
Query: 181 ISGRNSGKA-----------MWGQMNKF----LLEWAWQLHQEEKPLELVDPELGEYPPN 225
++ +S ++ GQM LLE +L + +K P
Sbjct: 231 LTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDK------------CPA 278
Query: 226 EIIRYMKVAFFCTQAAASRRPQMNQVIKML 255
E+ MK C + AS RP +I +L
Sbjct: 279 EVYHLMKN---CWETEASFRPTFENLIPIL 305
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 94/179 (52%), Gaps = 9/179 (5%)
Query: 5 TNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
++G+ +AVK + +Q E++ + + +H N+VE+ + G +V E++E
Sbjct: 97 SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 156
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+L ++ + ++N E+ + +C+ + + L+ LH + ++HRDIK+ +ILL +
Sbjct: 157 ALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGR 208
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
K+ DFG + + GT ++APE + + D++S G++V+E++ G
Sbjct: 209 VKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 11/188 (5%)
Query: 7 GRRIAVKPLSAESK-QGVREFITEIMTLSNVRHPNLVELIGCCVQ--GTRRILVYEYVEN 63
G ++AVK L ES + + EI L N+ H N+V+ G C + G L+ E++ +
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
SL L K K+N +++ V I KG+ +L VHRD+ A N+L++ E
Sbjct: 110 GSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEH 163
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEII 181
KIGDFGL K + T + + + APE ++ + + +DV+SFGV + E++
Sbjct: 164 QVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223
Query: 182 SGRNSGKA 189
+ +S +
Sbjct: 224 TYCDSDSS 231
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 11/188 (5%)
Query: 7 GRRIAVKPLSAESK-QGVREFITEIMTLSNVRHPNLVELIGCCVQ--GTRRILVYEYVEN 63
G ++AVK L ES + + EI L N+ H N+V+ G C + G L+ E++ +
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
SL L K K+N +++ V I KG+ +L VHRD+ A N+L++ E
Sbjct: 98 GSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEH 151
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEII 181
KIGDFGL K + T + + + APE ++ + + +DV+SFGV + E++
Sbjct: 152 QVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 211
Query: 182 SGRNSGKA 189
+ +S +
Sbjct: 212 TYCDSDSS 219
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 94/179 (52%), Gaps = 9/179 (5%)
Query: 5 TNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
++G+ +AVK + +Q E++ + + +H N+VE+ + G +V E++E
Sbjct: 174 SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 233
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+L ++ + ++N E+ + +C+ + + L+ LH + ++HRDIK+ +ILL +
Sbjct: 234 ALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGR 285
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
K+ DFG + + GT ++APE + + D++S G++V+E++ G
Sbjct: 286 VKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 121/271 (44%), Gaps = 45/271 (16%)
Query: 6 NGRRIAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVELIGCCV-QGTRRI-LVYEYVE 62
G +AVK L +R + EI L + H ++V+ GCC QG + + LV EYV
Sbjct: 37 TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 96
Query: 63 NNSLDRVLLGATKANIKLNWEKRSDICVGIAK----------GLAFLHEELVPHIVHRDI 112
SL L CVG+A+ G+A+LH + H +HR +
Sbjct: 97 LGSLRDYL---------------PRHCVGLAQLLLFAQQICEGMAYLHAQ---HYIHRAL 138
Query: 113 KASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADV 170
A N+LLD + KIGDFGLAK P+ + R G + + APE + + +DV
Sbjct: 139 AARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDV 198
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQL------HQEEKPLELVDPELGEYPP 224
+SFGV + E+++ +S ++ + + + Q+ E+ L P+ P
Sbjct: 199 WSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRC---P 255
Query: 225 NEIIRYMKVAFFCTQAAASRRPQMNQVIKML 255
EI MK C + AS RP ++ +L
Sbjct: 256 CEIYHLMKN---CWETEASFRPTFQNLVPIL 283
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 121/271 (44%), Gaps = 45/271 (16%)
Query: 6 NGRRIAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVELIGCCV-QGTRRI-LVYEYVE 62
G +AVK L +R + EI L + H ++V+ GCC QG + + LV EYV
Sbjct: 36 TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 95
Query: 63 NNSLDRVLLGATKANIKLNWEKRSDICVGIAK----------GLAFLHEELVPHIVHRDI 112
SL L CVG+A+ G+A+LH + H +HR +
Sbjct: 96 LGSLRDYL---------------PRHCVGLAQLLLFAQQICEGMAYLHAQ---HYIHRAL 137
Query: 113 KASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADV 170
A N+LLD + KIGDFGLAK P+ + R G + + APE + + +DV
Sbjct: 138 AARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDV 197
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQL------HQEEKPLELVDPELGEYPP 224
+SFGV + E+++ +S ++ + + + Q+ E+ L P+ P
Sbjct: 198 WSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRC---P 254
Query: 225 NEIIRYMKVAFFCTQAAASRRPQMNQVIKML 255
EI MK C + AS RP ++ +L
Sbjct: 255 CEIYHLMKN---CWETEASFRPTFQNLVPIL 282
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 121/254 (47%), Gaps = 23/254 (9%)
Query: 10 IAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A + R +F+ E + H N++ L G + +++ EY+EN +LD+
Sbjct: 76 VAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDK 135
Query: 69 VLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 128
L + + + + + + GIA G+ +L + VHRD+ A NIL++ K+
Sbjct: 136 FL---REKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVS 189
Query: 129 DFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS 186
DFGL+++ D+ T G + APE + + T +DV+SFG+++ E+++
Sbjct: 190 DFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT--YG 247
Query: 187 GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRP 246
+ W N +++ + P++ P+ I + M C Q +RRP
Sbjct: 248 ERPYWELSNHEVMKAINDGFRLPTPMDC---------PSAIYQLM---MQCWQQERARRP 295
Query: 247 QMNQVIKMLTKNIR 260
+ ++ +L K IR
Sbjct: 296 KFADIVSILDKLIR 309
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 42/279 (15%)
Query: 9 RIAVKPLSAE-SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSL 66
++AVK L ++ +++ + + I+E+ + + +H N++ L+G C Q ++ EY +L
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 67 DRVLLGATKANIKLNWEKRSD------------ICVGIAKGLAFLHEELVPHIVHRDIKA 114
L ++ ++ + +A+G+ +L + +HRD+ A
Sbjct: 122 REYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 178
Query: 115 SNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKAD 169
N+L+ ++ KI DFGLA+ +I HI T G ++APE + T ++D
Sbjct: 179 RNVLVTEDNVMKIADFGLAR----DIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 170 VYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIR 229
V+SFGVL+ EI + G G + L + + H+ +KP NE+
Sbjct: 235 VWSFGVLLWEIFT--LGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NELYM 283
Query: 230 YMKVAFFCTQAAASRRPQMNQVIKMLTKNIRL--NEEEL 266
M+ C A S+RP Q+++ L + + L N+E L
Sbjct: 284 MMRD---CWHAVPSQRPTFKQLVEDLDRIVALTSNQEXL 319
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 106/193 (54%), Gaps = 16/193 (8%)
Query: 1 MGTLTNGR---RIAVKPL--SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI 55
GT+ G+ +AVK L +A + Q ++ F E+ L RH N++ +G + +
Sbjct: 37 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLA 95
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 115
+V ++ E +SL L + K +K DI A+G+ +LH + I+HRD+K++
Sbjct: 96 IVTQWCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSN 149
Query: 116 NILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTTGYLAPEYVL---GGQLTMKADVY 171
NI L ++ KIGDFGLA + +H +++G+ ++APE + + ++DVY
Sbjct: 150 NIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVY 209
Query: 172 SFGVLVLEIISGR 184
+FG+++ E+++G+
Sbjct: 210 AFGIVLYELMTGQ 222
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 105/193 (54%), Gaps = 16/193 (8%)
Query: 1 MGTLTNGR---RIAVKPL--SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI 55
GT+ G+ +AVK L +A + Q ++ F E+ L RH N++ +G +
Sbjct: 37 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLA 95
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 115
+V ++ E +SL L + K +K DI A+G+ +LH + I+HRD+K++
Sbjct: 96 IVTQWCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSN 149
Query: 116 NILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTTGYLAPEYVL---GGQLTMKADVY 171
NI L ++ KIGDFGLA + +H +++G+ ++APE + + ++DVY
Sbjct: 150 NIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVY 209
Query: 172 SFGVLVLEIISGR 184
+FG+++ E+++G+
Sbjct: 210 AFGIVLYELMTGQ 222
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 96/183 (52%), Gaps = 12/183 (6%)
Query: 9 RIAVKPLSAESKQGVRE-FITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSL 66
++AVK L + + +E ++E+ +S++ +H N+V L+G C G +++ EY L
Sbjct: 70 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 129
Query: 67 DRVLLGATKANIK------LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L +A++ L +A+G+AFL + + +HRD+ A N+LL
Sbjct: 130 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLT 186
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAG-TTGYLAPEYVLGGQLTMKADVYSFGVLVLE 179
KIGDFGLA+ ++ +I A ++APE + T+++DV+S+G+L+ E
Sbjct: 187 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 246
Query: 180 IIS 182
I S
Sbjct: 247 IFS 249
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 127/276 (46%), Gaps = 40/276 (14%)
Query: 9 RIAVKPLSAE-SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSL 66
++AVK L ++ +++ + + I+E+ + + +H N++ L+G C Q ++ EY +L
Sbjct: 103 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 162
Query: 67 DRVLLGATKANIKLNWEKRSD------------ICVGIAKGLAFLHEELVPHIVHRDIKA 114
L ++ ++ + +A+G+ +L + +HRD+ A
Sbjct: 163 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 219
Query: 115 SNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKAD 169
N+L+ ++ KI DFGLA+ +I HI T G ++APE + T ++D
Sbjct: 220 RNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 275
Query: 170 VYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIR 229
V+SFGVL+ EI + G G + L + + H+ +KP NE+
Sbjct: 276 VWSFGVLLWEIFT--LGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NELYM 324
Query: 230 YMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 265
M+ C A S+RP Q+++ L + + L +
Sbjct: 325 MMRD---CWHAVPSQRPTFKQLVEDLDRIVALTSNQ 357
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 96/183 (52%), Gaps = 12/183 (6%)
Query: 9 RIAVKPLSAESKQGVRE-FITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSL 66
++AVK L + + +E ++E+ +S++ +H N+V L+G C G +++ EY L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 67 DRVLLGATKANIK------LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L +A++ L +A+G+AFL + + +HRD+ A N+LL
Sbjct: 138 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLT 194
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAG-TTGYLAPEYVLGGQLTMKADVYSFGVLVLE 179
KIGDFGLA+ ++ +I A ++APE + T+++DV+S+G+L+ E
Sbjct: 195 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 254
Query: 180 IIS 182
I S
Sbjct: 255 IFS 257
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 97/187 (51%), Gaps = 16/187 (8%)
Query: 9 RIAVKPLSAESKQGVRE-FITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSL 66
++AVK L + + +E ++E+ +S++ +H N+V L+G C G +++ EY L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 67 DRVLLGATK----------ANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
L ++ AN L+ +A+G+AFL + + +HRD+ A N
Sbjct: 138 LNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARN 194
Query: 117 ILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG-TTGYLAPEYVLGGQLTMKADVYSFGV 175
+LL KIGDFGLA+ ++ +I A ++APE + T+++DV+S+G+
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 176 LVLEIIS 182
L+ EI S
Sbjct: 255 LLWEIFS 261
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 97/191 (50%), Gaps = 25/191 (13%)
Query: 10 IAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTR----RILVYEYVENN 64
+AVK + KQ + E+ E+ +L ++H N+++ IG +GT L+ + E
Sbjct: 50 VAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKG 107
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL-------VPHIVHRDIKASNI 117
SL L KAN+ ++W + I +A+GLA+LHE++ P I HRDIK+ N+
Sbjct: 108 SLSDFL----KANV-VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNV 162
Query: 118 LLDQEFNPKIGDFGLAKLFPDNITHITTR-IAGTTGYLAPEYVLGG-----QLTMKADVY 171
LL I DFGLA F + T GT Y+APE + G ++ D+Y
Sbjct: 163 LLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMY 222
Query: 172 SFGVLVLEIIS 182
+ G+++ E+ S
Sbjct: 223 AMGLVLWELAS 233
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 127/276 (46%), Gaps = 40/276 (14%)
Query: 9 RIAVKPLSAE-SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSL 66
++AVK L ++ +++ + + I+E+ + + +H N++ L+G C Q ++ EY +L
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 67 DRVLLGATKANIKLNWEKRSD------------ICVGIAKGLAFLHEELVPHIVHRDIKA 114
L ++ ++ + +A+G+ +L + +HRD+ A
Sbjct: 122 REYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 178
Query: 115 SNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKAD 169
N+L+ ++ KI DFGLA+ +I HI T G ++APE + T ++D
Sbjct: 179 RNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 170 VYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIR 229
V+SFGVL+ EI + G G + L + + H+ +KP NE+
Sbjct: 235 VWSFGVLLWEIFT--LGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NELYM 283
Query: 230 YMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 265
M+ C A S+RP Q+++ L + + L +
Sbjct: 284 MMRD---CWHAVPSQRPTFKQLVEDLDRIVALTSNQ 316
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 127/276 (46%), Gaps = 40/276 (14%)
Query: 9 RIAVKPLSAE-SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSL 66
++AVK L ++ +++ + + I+E+ + + +H N++ L+G C Q ++ EY +L
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 67 DRVLLGATKANIKLNWEKRSD------------ICVGIAKGLAFLHEELVPHIVHRDIKA 114
L ++ ++ + +A+G+ +L + +HRD+ A
Sbjct: 122 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 178
Query: 115 SNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKAD 169
N+L+ ++ KI DFGLA+ +I HI T G ++APE + T ++D
Sbjct: 179 RNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 170 VYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIR 229
V+SFGVL+ EI + G G + L + + H+ +KP NE+
Sbjct: 235 VWSFGVLLWEIFT--LGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NELYM 283
Query: 230 YMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 265
M+ C A S+RP Q+++ L + + L +
Sbjct: 284 MMRD---CWHAVPSQRPTFKQLVEDLDRIVALTSNQ 316
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 105/193 (54%), Gaps = 16/193 (8%)
Query: 1 MGTLTNGR---RIAVKPL--SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI 55
GT+ G+ +AVK L +A + Q ++ F E+ L RH N++ +G + +
Sbjct: 23 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLA 81
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 115
+V ++ E +SL L K K DI A+G+ +LH + I+HRD+K++
Sbjct: 82 IVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSN 135
Query: 116 NILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTTGYLAPEYVL---GGQLTMKADVY 171
NI L ++ KIGDFGLA + + +H +++G+ ++APE + + ++DVY
Sbjct: 136 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 195
Query: 172 SFGVLVLEIISGR 184
+FG+++ E+++G+
Sbjct: 196 AFGIVLYELMTGQ 208
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 105/193 (54%), Gaps = 16/193 (8%)
Query: 1 MGTLTNGR---RIAVKPL--SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI 55
GT+ G+ +AVK L +A + Q ++ F E+ L RH N++ +G + +
Sbjct: 21 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLA 79
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 115
+V ++ E +SL L K K DI A+G+ +LH + I+HRD+K++
Sbjct: 80 IVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSN 133
Query: 116 NILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTTGYLAPEYVL---GGQLTMKADVY 171
NI L ++ KIGDFGLA + + +H +++G+ ++APE + + ++DVY
Sbjct: 134 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 193
Query: 172 SFGVLVLEIISGR 184
+FG+++ E+++G+
Sbjct: 194 AFGIVLYELMTGQ 206
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 127/276 (46%), Gaps = 40/276 (14%)
Query: 9 RIAVKPLSAE-SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSL 66
++AVK L ++ +++ + + I+E+ + + +H N++ L+G C Q ++ EY +L
Sbjct: 51 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 110
Query: 67 DRVLLGATKANIKLNWEKRSD------------ICVGIAKGLAFLHEELVPHIVHRDIKA 114
L ++ ++ + +A+G+ +L + +HRD+ A
Sbjct: 111 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 167
Query: 115 SNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKAD 169
N+L+ ++ KI DFGLA+ +I HI T G ++APE + T ++D
Sbjct: 168 RNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 223
Query: 170 VYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIR 229
V+SFGVL+ EI + G G + L + + H+ +KP NE+
Sbjct: 224 VWSFGVLLWEIFT--LGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NELYM 272
Query: 230 YMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 265
M+ C A S+RP Q+++ L + + L +
Sbjct: 273 MMRD---CWHAVPSQRPTFKQLVEDLDRIVALTSNQ 305
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 105/193 (54%), Gaps = 16/193 (8%)
Query: 1 MGTLTNGR---RIAVKPL--SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI 55
GT+ G+ +AVK L +A + Q ++ F E+ L RH N++ +G + +
Sbjct: 26 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLA 84
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 115
+V ++ E +SL L K K DI A+G+ +LH + I+HRD+K++
Sbjct: 85 IVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSN 138
Query: 116 NILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTTGYLAPEYVL---GGQLTMKADVY 171
NI L ++ KIGDFGLA + + +H +++G+ ++APE + + ++DVY
Sbjct: 139 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 198
Query: 172 SFGVLVLEIISGR 184
+FG+++ E+++G+
Sbjct: 199 AFGIVLYELMTGQ 211
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 127/276 (46%), Gaps = 40/276 (14%)
Query: 9 RIAVKPLSAE-SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSL 66
++AVK L ++ +++ + + I+E+ + + +H N++ L+G C Q ++ EY +L
Sbjct: 55 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 114
Query: 67 DRVLLGATKANIKLNWEKRSD------------ICVGIAKGLAFLHEELVPHIVHRDIKA 114
L ++ ++ + +A+G+ +L + +HRD+ A
Sbjct: 115 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 171
Query: 115 SNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKAD 169
N+L+ ++ KI DFGLA+ +I HI T G ++APE + T ++D
Sbjct: 172 RNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 227
Query: 170 VYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIR 229
V+SFGVL+ EI + G G + L + + H+ +KP NE+
Sbjct: 228 VWSFGVLLWEIFT--LGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NELYM 276
Query: 230 YMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 265
M+ C A S+RP Q+++ L + + L +
Sbjct: 277 MMRD---CWHAVPSQRPTFKQLVEDLDRIVALTSNQ 309
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 127/276 (46%), Gaps = 40/276 (14%)
Query: 9 RIAVKPLSAE-SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSL 66
++AVK L ++ +++ + + I+E+ + + +H N++ L+G C Q ++ EY +L
Sbjct: 54 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 113
Query: 67 DRVLLGATKANIKLNWEKRSD------------ICVGIAKGLAFLHEELVPHIVHRDIKA 114
L ++ ++ + +A+G+ +L + +HRD+ A
Sbjct: 114 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 170
Query: 115 SNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKAD 169
N+L+ ++ KI DFGLA+ +I HI T G ++APE + T ++D
Sbjct: 171 RNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 226
Query: 170 VYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIR 229
V+SFGVL+ EI + G G + L + + H+ +KP NE+
Sbjct: 227 VWSFGVLLWEIFT--LGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NELYM 275
Query: 230 YMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 265
M+ C A S+RP Q+++ L + + L +
Sbjct: 276 MMRD---CWHAVPSQRPTFKQLVEDLDRIVALTSNQ 308
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 105/193 (54%), Gaps = 16/193 (8%)
Query: 1 MGTLTNGR---RIAVKPL--SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI 55
GT+ G+ +AVK L +A + Q ++ F E+ L RH N++ +G + +
Sbjct: 26 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLA 84
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 115
+V ++ E +SL L K K DI A+G+ +LH + I+HRD+K++
Sbjct: 85 IVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSN 138
Query: 116 NILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTTGYLAPEYVL---GGQLTMKADVY 171
NI L ++ KIGDFGLA + + +H +++G+ ++APE + + ++DVY
Sbjct: 139 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 198
Query: 172 SFGVLVLEIISGR 184
+FG+++ E+++G+
Sbjct: 199 AFGIVLYELMTGQ 211
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 104/193 (53%), Gaps = 16/193 (8%)
Query: 1 MGTLTNGR---RIAVKPL--SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI 55
GT+ G+ +AVK L +A + Q ++ F E+ L RH N++ +G +
Sbjct: 21 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLA 79
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 115
+V ++ E +SL L K K DI A+G+ +LH + I+HRD+K++
Sbjct: 80 IVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSN 133
Query: 116 NILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTTGYLAPEYVL---GGQLTMKADVY 171
NI L ++ KIGDFGLA + + +H +++G+ ++APE + + ++DVY
Sbjct: 134 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 193
Query: 172 SFGVLVLEIISGR 184
+FG+++ E+++G+
Sbjct: 194 AFGIVLYELMTGQ 206
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 94/180 (52%), Gaps = 10/180 (5%)
Query: 6 NGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
+G +A K + E K +R + I E+ L P +V G + E+++
Sbjct: 40 SGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 99
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SLD+VL K ++ E + + + +GLA+L E+ I+HRD+K SNIL++
Sbjct: 100 SLDQVL----KEAKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGE 153
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
K+ DFG++ D++ + GT Y+APE + G ++++D++S G+ ++E+ GR
Sbjct: 154 IKLCDFGVSGQLIDSMAN---SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 105/193 (54%), Gaps = 16/193 (8%)
Query: 1 MGTLTNGR---RIAVKPL--SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI 55
GT+ G+ +AVK L +A + Q ++ F E+ L RH N++ +G + +
Sbjct: 48 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLA 106
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 115
+V ++ E +SL L K K DI A+G+ +LH + I+HRD+K++
Sbjct: 107 IVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSN 160
Query: 116 NILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTTGYLAPEYVL---GGQLTMKADVY 171
NI L ++ KIGDFGLA + + +H +++G+ ++APE + + ++DVY
Sbjct: 161 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 220
Query: 172 SFGVLVLEIISGR 184
+FG+++ E+++G+
Sbjct: 221 AFGIVLYELMTGQ 233
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 105/193 (54%), Gaps = 16/193 (8%)
Query: 1 MGTLTNGR---RIAVKPL--SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI 55
GT+ G+ +AVK L +A + Q ++ F E+ L RH N++ +G + +
Sbjct: 49 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLA 107
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 115
+V ++ E +SL L K K DI A+G+ +LH + I+HRD+K++
Sbjct: 108 IVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSN 161
Query: 116 NILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTTGYLAPEYVL---GGQLTMKADVY 171
NI L ++ KIGDFGLA + + +H +++G+ ++APE + + ++DVY
Sbjct: 162 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 221
Query: 172 SFGVLVLEIISGR 184
+FG+++ E+++G+
Sbjct: 222 AFGIVLYELMTGQ 234
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 42/279 (15%)
Query: 9 RIAVKPLSAE-SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSL 66
++AVK L ++ +++ + + I+E+ + + +H N++ L+G C Q ++ EY +L
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 67 DRVLLGATKANI------------KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKA 114
L + +L+ + +A+G+ +L + +HRD+ A
Sbjct: 122 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 178
Query: 115 SNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKAD 169
N+L+ ++ KI DFGLA+ +I HI T G ++APE + T ++D
Sbjct: 179 RNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 170 VYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIR 229
V+SFGVL+ EI + G G + L + + H+ +KP NE+
Sbjct: 235 VWSFGVLLWEIFT--LGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NELYM 283
Query: 230 YMKVAFFCTQAAASRRPQMNQVIKMLTKNIRL--NEEEL 266
M+ C A S+RP Q+++ L + + L N+E L
Sbjct: 284 MMRD---CWHAVPSQRPTFKQLVEDLDRIVALTSNQEYL 319
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 4 LTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
+ G+ +A++ ++ + + I EI+ + ++PN+V + + G +V EY+
Sbjct: 42 VATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
SL V+ ++ + + +C + L FLH ++HRDIK+ NILL +
Sbjct: 102 GSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDG 153
Query: 124 NPKIGDFGL-AKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
+ K+ DFG A++ P+ T + GT ++APE V K D++S G++ +E+I
Sbjct: 154 SVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 211
Query: 183 G 183
G
Sbjct: 212 G 212
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 139
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + V +HRDIK N+LL KI DFG + P + T +
Sbjct: 140 ITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLC 193
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 114
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + V +HRDIK N+LL KI DFG + P + T ++
Sbjct: 115 ITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR---TTLS 168
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 4 LTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
+ G+ +A++ ++ + + I EI+ + ++PN+V + + G +V EY+
Sbjct: 42 VATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
SL V+ ++ + + +C + L FLH ++HRDIK+ NILL +
Sbjct: 102 GSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDG 153
Query: 124 NPKIGDFGL-AKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
+ K+ DFG A++ P+ + + GT ++APE V K D++S G++ +E+I
Sbjct: 154 SVKLTDFGFCAQITPEQSKR--SEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 211
Query: 183 G 183
G
Sbjct: 212 G 212
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 113
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + V +HRDIK N+LL KI DFG + P + T +
Sbjct: 114 ITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TELC 167
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 98/186 (52%), Gaps = 24/186 (12%)
Query: 6 NGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNS 65
G A K + +S++ + ++I EI L+ HP +V+L+G + ++ E+ +
Sbjct: 43 TGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGA 102
Query: 66 LDRVLL----GATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
+D ++L G T+ I++ +C + + L FLH + I+HRD+KA N+L+
Sbjct: 103 VDAIMLELDRGLTEPQIQV-------VCRQMLEALNFLHSK---RIIHRDLKAGNVLMTL 152
Query: 122 EFNPKIGDFGLAKLFPDNITHITTRIA--GTTGYLAPEYVLGGQL-----TMKADVYSFG 174
E + ++ DFG++ N+ + R + GT ++APE V+ + KAD++S G
Sbjct: 153 EGDIRLADFGVSA---KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLG 209
Query: 175 VLVLEI 180
+ ++E+
Sbjct: 210 ITLIEM 215
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 127/276 (46%), Gaps = 40/276 (14%)
Query: 9 RIAVKPLSAE-SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSL 66
++AVK L ++ +++ + + I+E+ + + +H N++ L+G C Q ++ EY +L
Sbjct: 47 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 106
Query: 67 DRVLLGATKANI------------KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKA 114
L + +L+ + +A+G+ +L + +HRD+ A
Sbjct: 107 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 163
Query: 115 SNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKAD 169
N+L+ ++ KI DFGLA+ +I HI T G ++APE + T ++D
Sbjct: 164 RNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 219
Query: 170 VYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIR 229
V+SFGVL+ EI + G G + L + + H+ +KP NE+
Sbjct: 220 VWSFGVLLWEIFT--LGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NELYM 268
Query: 230 YMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 265
M+ C A S+RP Q+++ L + + L +
Sbjct: 269 MMRD---CWHAVPSQRPTFKQLVEDLDRIVALTSNQ 301
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 98/186 (52%), Gaps = 24/186 (12%)
Query: 6 NGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNS 65
G A K + +S++ + ++I EI L+ HP +V+L+G + ++ E+ +
Sbjct: 35 TGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGA 94
Query: 66 LDRVLL----GATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
+D ++L G T+ I++ +C + + L FLH + I+HRD+KA N+L+
Sbjct: 95 VDAIMLELDRGLTEPQIQV-------VCRQMLEALNFLHSK---RIIHRDLKAGNVLMTL 144
Query: 122 EFNPKIGDFGLAKLFPDNITHITTRIA--GTTGYLAPEYVLGGQL-----TMKADVYSFG 174
E + ++ DFG++ N+ + R + GT ++APE V+ + KAD++S G
Sbjct: 145 EGDIRLADFGVSA---KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLG 201
Query: 175 VLVLEI 180
+ ++E+
Sbjct: 202 ITLIEM 207
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 4 LTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
+ G+ +A++ ++ + + I EI+ + ++PN+V + + G +V EY+
Sbjct: 43 VATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 102
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
SL V+ ++ + + +C + L FLH ++HRDIK+ NILL +
Sbjct: 103 GSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDG 154
Query: 124 NPKIGDFGL-AKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
+ K+ DFG A++ P+ + + GT ++APE V K D++S G++ +E+I
Sbjct: 155 SVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 212
Query: 183 G 183
G
Sbjct: 213 G 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 4 LTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
+ G+ +A++ ++ + + I EI+ + ++PN+V + + G +V EY+
Sbjct: 42 VATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
SL V+ ++ + + +C + L FLH ++HRDIK+ NILL +
Sbjct: 102 GSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDG 153
Query: 124 NPKIGDFGL-AKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
+ K+ DFG A++ P+ + + GT ++APE V K D++S G++ +E+I
Sbjct: 154 SVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 211
Query: 183 G 183
G
Sbjct: 212 G 212
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 11/180 (6%)
Query: 7 GRRIAVKP-LSAESKQGVREF-ITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
GR +A+K L ++ + V++ + EI L +RH NLV L+ C + R LV+E+V++
Sbjct: 50 GRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHT 109
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
LD + L L+++ I G+ F H +I+HRDIK NIL+ Q
Sbjct: 110 ILDDLELFPN----GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGV 162
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIISG 183
K+ DFG A+ +A T Y APE ++G KA DV++ G LV E+ G
Sbjct: 163 VKLCDFGFARTLAAPGEVYDDEVA-TRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 104/193 (53%), Gaps = 16/193 (8%)
Query: 1 MGTLTNGR---RIAVKPL--SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI 55
GT+ G+ +AVK L +A + Q ++ F E+ L RH N++ +G + +
Sbjct: 21 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLA 79
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 115
+V ++ E +SL L K K DI A+G+ +LH + I+HRD+K++
Sbjct: 80 IVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSN 133
Query: 116 NILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTTGYLAPEYVL---GGQLTMKADVY 171
NI L ++ KIGDFGLA + +H +++G+ ++APE + + ++DVY
Sbjct: 134 NIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 193
Query: 172 SFGVLVLEIISGR 184
+FG+++ E+++G+
Sbjct: 194 AFGIVLYELMTGQ 206
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 113
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + ++HRDIK N+LL KI DFG + P + T +
Sbjct: 114 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLC 167
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 113
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + ++HRDIK N+LL KI DFG + P + T +
Sbjct: 114 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLC 167
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 118
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + V +HRDIK N+LL KI DFG + P + T +
Sbjct: 119 ITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLC 172
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 173 GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 75 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 130
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + V +HRDIK N+LL KI DFG + P + T +
Sbjct: 131 ITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLC 184
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 185 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 118
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + ++HRDIK N+LL KI DFG + P + T +
Sbjct: 119 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLC 172
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 116
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + V +HRDIK N+LL KI DFG + P + T +
Sbjct: 117 ITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLC 170
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 114
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + ++HRDIK N+LL KI DFG + P + T +
Sbjct: 115 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLC 168
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 118
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + V +HRDIK N+LL KI DFG + P + T +
Sbjct: 119 ITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLC 172
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 116
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + ++HRDIK N+LL KI DFG + P + T +
Sbjct: 117 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLC 170
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 113
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + ++HRDIK N+LL KI DFG + P + T +
Sbjct: 114 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TXLC 167
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 113
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + V +HRDIK N+LL KI DFG + P + T +
Sbjct: 114 ITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLC 167
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 117
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + ++HRDIK N+LL KI DFG + P + T +
Sbjct: 118 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLC 171
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 57 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 112
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + ++HRDIK N+LL KI DFG + P + T +
Sbjct: 113 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLC 166
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 167 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 119/270 (44%), Gaps = 39/270 (14%)
Query: 10 IAVKPLSAESKQGVRE-FITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSL- 66
+AVK L + RE ++E+ LS + H N+V L+G C G +++ EY L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 67 -------DRVLLGATKANI------KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIK 113
D + T I L+ E +AKG+AFL + + +HRD+
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLA 195
Query: 114 ASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG-TTGYLAPEYVLGGQLTMKADVYS 172
A NILL KI DFGLA+ ++ ++ A ++APE + T ++DV+S
Sbjct: 196 ARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 255
Query: 173 FGVLVLEIISGRNS---GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIR 229
+G+ + E+ S +S G + + K + E L E P E+ D
Sbjct: 256 YGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYD------------- 302
Query: 230 YMKVAFFCTQAAASRRPQMNQVIKMLTKNI 259
MK C A +RP Q+++++ K I
Sbjct: 303 IMKT---CWDADPLKRPTFKQIVQLIEKQI 329
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 55 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 110
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + ++HRDIK N+LL KI DFG + P + T +
Sbjct: 111 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLC 164
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 165 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 96/187 (51%), Gaps = 16/187 (8%)
Query: 9 RIAVKPLSAESKQGVRE-FITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSL 66
++AVK L + + +E ++E+ +S++ +H N+V L+G C G +++ EY L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 67 DRVLLGATK----------ANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
L ++ AN + +A+G+AFL + + +HRD+ A N
Sbjct: 138 LNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARN 194
Query: 117 ILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG-TTGYLAPEYVLGGQLTMKADVYSFGV 175
+LL KIGDFGLA+ ++ +I A ++APE + T+++DV+S+G+
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 176 LVLEIIS 182
L+ EI S
Sbjct: 255 LLWEIFS 261
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 104/193 (53%), Gaps = 16/193 (8%)
Query: 1 MGTLTNGR---RIAVKPL--SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI 55
GT+ G+ +AVK L +A + Q ++ F E+ L RH N++ +G + +
Sbjct: 41 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLA 99
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 115
+V ++ E +SL L K K DI A+G+ +LH + I+HRD+K++
Sbjct: 100 IVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSN 153
Query: 116 NILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTTGYLAPEYVL---GGQLTMKADVY 171
NI L ++ KIGDFGLA + +H +++G+ ++APE + + ++DVY
Sbjct: 154 NIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 213
Query: 172 SFGVLVLEIISGR 184
+FG+++ E+++G+
Sbjct: 214 AFGIVLYELMTGQ 226
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY + + L +K + ++ +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATY 118
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + V +HRDIK N+LL KI DFG + P + T +
Sbjct: 119 ITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLC 172
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 23/185 (12%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY 60
M T ++AVK + S V F+ E + ++H LV+L + I+ E+
Sbjct: 200 MATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIIT-EF 257
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ SL L + L K D IA+G+AF+ + + +HRD++A+NIL+
Sbjct: 258 MAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVS 312
Query: 121 QEFNPKIGDFGLAKL---FPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
KI DFGLA++ FP + APE + G T+K+DV+SFG+L+
Sbjct: 313 ASLVCKIADFGLARVGAKFP-------------IKWTAPEAINFGSFTIKSDVWSFGILL 359
Query: 178 LEIIS 182
+EI++
Sbjct: 360 MEIVT 364
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 104/193 (53%), Gaps = 16/193 (8%)
Query: 1 MGTLTNGR---RIAVKPL--SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI 55
GT+ G+ +AVK L +A + Q ++ F E+ L RH N++ +G + +
Sbjct: 49 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLA 107
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 115
+V ++ E +SL L K K DI A+G+ +LH + I+HRD+K++
Sbjct: 108 IVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSN 161
Query: 116 NILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTTGYLAPEYVL---GGQLTMKADVY 171
NI L ++ KIGDFGLA + +H +++G+ ++APE + + ++DVY
Sbjct: 162 NIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 221
Query: 172 SFGVLVLEIISGR 184
+FG+++ E+++G+
Sbjct: 222 AFGIVLYELMTGQ 234
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 119/270 (44%), Gaps = 39/270 (14%)
Query: 10 IAVKPLSAESKQGVRE-FITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSL- 66
+AVK L + RE ++E+ LS + H N+V L+G C G +++ EY L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 67 -------DRVLLGATKANI------KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIK 113
D + T I L+ E +AKG+AFL + + +HRD+
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLA 195
Query: 114 ASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG-TTGYLAPEYVLGGQLTMKADVYS 172
A NILL KI DFGLA+ ++ ++ A ++APE + T ++DV+S
Sbjct: 196 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 255
Query: 173 FGVLVLEIISGRNS---GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIR 229
+G+ + E+ S +S G + + K + E L E P E+ D
Sbjct: 256 YGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYD------------- 302
Query: 230 YMKVAFFCTQAAASRRPQMNQVIKMLTKNI 259
MK C A +RP Q+++++ K I
Sbjct: 303 IMKT---CWDADPLKRPTFKQIVQLIEKQI 329
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 119/270 (44%), Gaps = 39/270 (14%)
Query: 10 IAVKPLSAESKQGVRE-FITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSL- 66
+AVK L + RE ++E+ LS + H N+V L+G C G +++ EY L
Sbjct: 56 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 115
Query: 67 -------DRVLLGATKANI------KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIK 113
D + T I L+ E +AKG+AFL + + +HRD+
Sbjct: 116 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLA 172
Query: 114 ASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG-TTGYLAPEYVLGGQLTMKADVYS 172
A NILL KI DFGLA+ ++ ++ A ++APE + T ++DV+S
Sbjct: 173 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 232
Query: 173 FGVLVLEIISGRNS---GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIR 229
+G+ + E+ S +S G + + K + E L E P E+ D
Sbjct: 233 YGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYD------------- 279
Query: 230 YMKVAFFCTQAAASRRPQMNQVIKMLTKNI 259
MK C A +RP Q+++++ K I
Sbjct: 280 IMKT---CWDADPLKRPTFKQIVQLIEKQI 306
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 119/270 (44%), Gaps = 39/270 (14%)
Query: 10 IAVKPLSAESKQGVRE-FITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSL- 66
+AVK L + RE ++E+ LS + H N+V L+G C G +++ EY L
Sbjct: 74 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 133
Query: 67 -------DRVLLGATKANI------KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIK 113
D + T I L+ E +AKG+AFL + + +HRD+
Sbjct: 134 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLA 190
Query: 114 ASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG-TTGYLAPEYVLGGQLTMKADVYS 172
A NILL KI DFGLA+ ++ ++ A ++APE + T ++DV+S
Sbjct: 191 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 250
Query: 173 FGVLVLEIISGRNS---GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIR 229
+G+ + E+ S +S G + + K + E L E P E+ D
Sbjct: 251 YGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYD------------- 297
Query: 230 YMKVAFFCTQAAASRRPQMNQVIKMLTKNI 259
MK C A +RP Q+++++ K I
Sbjct: 298 IMKT---CWDADPLKRPTFKQIVQLIEKQI 324
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 119/270 (44%), Gaps = 39/270 (14%)
Query: 10 IAVKPLSAESKQGVRE-FITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSL- 66
+AVK L + RE ++E+ LS + H N+V L+G C G +++ EY L
Sbjct: 72 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 131
Query: 67 -------DRVLLGATKANI------KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIK 113
D + T I L+ E +AKG+AFL + + +HRD+
Sbjct: 132 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLA 188
Query: 114 ASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG-TTGYLAPEYVLGGQLTMKADVYS 172
A NILL KI DFGLA+ ++ ++ A ++APE + T ++DV+S
Sbjct: 189 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 248
Query: 173 FGVLVLEIISGRNS---GKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIR 229
+G+ + E+ S +S G + + K + E L E P E+ D
Sbjct: 249 YGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYD------------- 295
Query: 230 YMKVAFFCTQAAASRRPQMNQVIKMLTKNI 259
MK C A +RP Q+++++ K I
Sbjct: 296 IMKT---CWDADPLKRPTFKQIVQLIEKQI 322
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 14/181 (7%)
Query: 9 RIAVKPL---SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNS 65
++A+K + E ++ ++ F E+ S + H N+V +I + LV EY+E +
Sbjct: 38 KVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPT 97
Query: 66 LDRVL--LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
L + G + +N+ + I G+ H+ IVHRDIK NIL+D
Sbjct: 98 LSEYIESHGPLSVDTAINFTNQ------ILDGIKHAHD---MRIVHRDIKPQNILIDSNK 148
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
KI DFG+AK + T + GT Y +PE G D+YS G+++ E++ G
Sbjct: 149 TLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVG 208
Query: 184 R 184
Sbjct: 209 E 209
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 6 NGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNS 65
G+ +A+K + ES ++E I EI + P++V+ G + T +V EY S
Sbjct: 53 TGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGS 110
Query: 66 LDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 125
+ ++ K L ++ + I KGL +LH +HRDIKA NILL+ E +
Sbjct: 111 VSDIIRLRNKT---LTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHA 164
Query: 126 KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
K+ DFG+A D + + GT ++APE + AD++S G+ +E+ G+
Sbjct: 165 KLADFGVAGQLTDXMAK-RNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 89/173 (51%), Gaps = 6/173 (3%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C + ++ E++ +L
Sbjct: 46 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + N + I+ + +L ++ + +HRD+ A N L+ + K+ D
Sbjct: 105 LRECNRQEV--NAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVAD 159
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++L + + APE + + ++K+DV++FGVL+ EI +
Sbjct: 160 FGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 4 LTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
+ G+ +A++ ++ + + I EI+ + ++PN+V + + G +V EY+
Sbjct: 43 VATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 102
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
SL V+ ++ + + +C + L FLH ++HR+IK+ NILL +
Sbjct: 103 GSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSN---QVIHRNIKSDNILLGMDG 154
Query: 124 NPKIGDFGL-AKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
+ K+ DFG A++ P+ T + GT ++APE V K D++S G++ +E+I
Sbjct: 155 SVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 212
Query: 183 G 183
G
Sbjct: 213 G 213
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 89/173 (51%), Gaps = 6/173 (3%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C + ++ E++ +L
Sbjct: 42 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 100
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + N + I+ + +L ++ + +HRD+ A N L+ + K+ D
Sbjct: 101 LRECNRQEV--NAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVAD 155
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++L + + APE + + ++K+DV++FGVL+ EI +
Sbjct: 156 FGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 89/173 (51%), Gaps = 6/173 (3%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C + ++ E++ +L
Sbjct: 42 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 100
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + N + I+ + +L ++ + +HRD+ A N L+ + K+ D
Sbjct: 101 LRECNRQEV--NAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVAD 155
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++L + + APE + + ++K+DV++FGVL+ EI +
Sbjct: 156 FGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 89/173 (51%), Gaps = 6/173 (3%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C + ++ E++ +L
Sbjct: 43 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + N + I+ + +L ++ + +HRD+ A N L+ + K+ D
Sbjct: 102 LRECNRQEV--NAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVAD 156
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++L + + APE + + ++K+DV++FGVL+ EI +
Sbjct: 157 FGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 89/173 (51%), Gaps = 6/173 (3%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C + ++ E++ +L
Sbjct: 41 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + N + I+ + +L ++ + +HRD+ A N L+ + K+ D
Sbjct: 100 LRECNRQEV--NAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVAD 154
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++L + + APE + + ++K+DV++FGVL+ EI +
Sbjct: 155 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 96/189 (50%), Gaps = 18/189 (9%)
Query: 9 RIAVKPLSAESKQGVRE-FITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSL 66
++AVK L + + +E ++E+ +S++ +H N+V L+G C G +++ EY L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 67 DRVLLGATKANIKLNWEKRSD------------ICVGIAKGLAFLHEELVPHIVHRDIKA 114
L ++ ++ + +A+G+AFL + + +HRD+ A
Sbjct: 138 LNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASK---NCIHRDVAA 194
Query: 115 SNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG-TTGYLAPEYVLGGQLTMKADVYSF 173
N+LL KIGDFGLA+ ++ +I A ++APE + T+++DV+S+
Sbjct: 195 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 254
Query: 174 GVLVLEIIS 182
G+L+ EI S
Sbjct: 255 GILLWEIFS 263
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 89/173 (51%), Gaps = 6/173 (3%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C + ++ E++ +L
Sbjct: 46 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + N + I+ + +L ++ + +HRD+ A N L+ + K+ D
Sbjct: 105 LRECNRQEV--NAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVAD 159
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++L + + APE + + ++K+DV++FGVL+ EI +
Sbjct: 160 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 31/242 (12%)
Query: 24 REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE 83
+EF E+ +SN+ HPN+V+L G R +V E+V L LL + W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP---IKWS 122
Query: 84 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD--QEFNP---KIGDFGLAKLFPD 138
+ + + IA G+ ++ + P IVHRD+++ NI L E P K+ DFGL++
Sbjct: 123 VKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ---- 177
Query: 139 NITHITTRIAGTTGYLAPEYVLGGQ--LTMKADVYSFGVLVLEIISGRNS-GKAMWGQMN 195
H + + G ++APE + + T KAD YSF +++ I++G + +G++
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI- 236
Query: 196 KFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 255
KF+ + +EE L PE + PP R V C +RP + ++K L
Sbjct: 237 KFI-----NMIREEG-LRPTIPE--DCPP----RLRNVIELCWSGDPKKRPHFSYIVKEL 284
Query: 256 TK 257
++
Sbjct: 285 SE 286
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 89/173 (51%), Gaps = 6/173 (3%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C + ++ E++ +L
Sbjct: 54 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 112
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + N + I+ + +L ++ + +HRD+ A N L+ + K+ D
Sbjct: 113 LRECNRQEV--NAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVAD 167
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++L + + APE + + ++K+DV++FGVL+ EI +
Sbjct: 168 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 89/173 (51%), Gaps = 6/173 (3%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C + ++ E++ +L
Sbjct: 45 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 103
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + N + I+ + +L ++ + +HRD+ A N L+ + K+ D
Sbjct: 104 LRECNRQEV--NAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVAD 158
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++L + + APE + + ++K+DV++FGVL+ EI +
Sbjct: 159 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 89/173 (51%), Gaps = 6/173 (3%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C + ++ E++ +L
Sbjct: 46 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 104
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + N + I+ + +L ++ + +HRD+ A N L+ + K+ D
Sbjct: 105 LRECNRQEV--NAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVAD 159
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++L + + APE + + ++K+DV++FGVL+ EI +
Sbjct: 160 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 89/173 (51%), Gaps = 6/173 (3%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C + ++ E++ +L
Sbjct: 41 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + N + I+ + +L ++ + +HRD+ A N L+ + K+ D
Sbjct: 100 LRECNRQEV--NAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVAD 154
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++L + + APE + + ++K+DV++FGVL+ EI +
Sbjct: 155 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Query: 6 NGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
+G +A K + E K +R + I E+ L P +V G + E+++
Sbjct: 49 SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 108
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SLD+VL K ++ + + + + KGL +L E+ I+HRD+K SNIL++
Sbjct: 109 SLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGE 162
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
K+ DFG++ D++ + GT Y++PE + G ++++D++S G+ ++E+ GR
Sbjct: 163 IKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
Query: 185 NSGKAMWGQMNKF-LLEW 201
+ G M F LL++
Sbjct: 220 YPIGSGSGSMAIFELLDY 237
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 139
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + V +HRDIK N+LL KI DFG + P + +
Sbjct: 140 ITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DDLC 193
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 89/173 (51%), Gaps = 6/173 (3%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C + ++ E++ +L
Sbjct: 43 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + N + I+ + +L ++ + +HRD+ A N L+ + K+ D
Sbjct: 102 LRECNRQEV--NAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVAD 156
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++L + + APE + + ++K+DV++FGVL+ EI +
Sbjct: 157 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 89/173 (51%), Gaps = 6/173 (3%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C + ++ E++ +L
Sbjct: 43 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + N + I+ + +L ++ + +HRD+ A N L+ + K+ D
Sbjct: 102 LRECNRQEV--NAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVAD 156
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++L + + APE + + ++K+DV++FGVL+ EI +
Sbjct: 157 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 89/173 (51%), Gaps = 6/173 (3%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C + ++ E++ +L
Sbjct: 46 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + N + I+ + +L ++ + +HRD+ A N L+ + K+ D
Sbjct: 105 LRECNRQEV--NAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVAD 159
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++L + + APE + + ++K+DV++FGVL+ EI +
Sbjct: 160 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 115
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + V +HRDIK N+LL KI DFG + P + +
Sbjct: 116 ITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLC 169
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 114
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + ++HRDIK N+LL KI DFG + P + +
Sbjct: 115 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT---LC 168
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 116
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + ++HRDIK N+LL KI DFG + P + +
Sbjct: 117 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---AALC 170
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 116
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + ++HRDIK N+LL KI DFG + P + +
Sbjct: 117 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLC 170
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 115
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + ++HRDIK N+LL KI +FG + P + T +
Sbjct: 116 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR---TTLC 169
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 116
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + ++HRDIK N+LL KI +FG + P + T +
Sbjct: 117 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR---TTLC 170
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 113
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + ++HRDIK N+LL KI DFG + P + +
Sbjct: 114 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---AALC 167
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 113
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + ++HRDIK N+LL KI DFG + P + +
Sbjct: 114 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLC 167
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 89/167 (53%), Gaps = 24/167 (14%)
Query: 25 EFITEIMTLSNVRHPNLVELIGCCVQGTRRIL--------VYEYVENNSLDRVLLGATKA 76
EF+ E + ++++ HP+LV L+G C+ T +++ + EYV + D + +
Sbjct: 63 EFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHK-DNI-----GS 116
Query: 77 NIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF 136
+ LNW CV IAKG+ +L E +VHRD+ A N+L+ + KI DFGLA+L
Sbjct: 117 QLLLNW------CVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLL 167
Query: 137 P-DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
D + ++A E + + T ++DV+S+GV + E+++
Sbjct: 168 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L ++ + ++ +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR----FDEQRTATY 117
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + V +HRDIK N+LL KI DFG + P + T +
Sbjct: 118 ITELANALSYCHSKRV---IHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR---TTLC 171
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
GT YL PE + G K D++S GVL E + G
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 89/167 (53%), Gaps = 24/167 (14%)
Query: 25 EFITEIMTLSNVRHPNLVELIGCCVQGTRRIL--------VYEYVENNSLDRVLLGATKA 76
EF+ E + ++++ HP+LV L+G C+ T +++ + EYV + D + +
Sbjct: 86 EFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHK-DNI-----GS 139
Query: 77 NIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF 136
+ LNW CV IAKG+ +L E +VHRD+ A N+L+ + KI DFGLA+L
Sbjct: 140 QLLLNW------CVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLL 190
Query: 137 P-DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
D + ++A E + + T ++DV+S+GV + E+++
Sbjct: 191 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 12/176 (6%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C + ++ E++ +L
Sbjct: 39 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 97
Query: 70 LLGATKANIK---LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK 126
L + + L + + I+ + +L ++ + +HRD+ A N L+ + K
Sbjct: 98 LRECNRQEVSAVVLLY-----MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVK 149
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
+ DFGL++L + + APE + + ++K+DV++FGVL+ EI +
Sbjct: 150 VADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 6 NGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
+G +A K + E K +R + I E+ L P +V G + E+++
Sbjct: 92 SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 151
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SLD+VL K ++ + + + + KGL +L E+ I+HRD+K SNIL++
Sbjct: 152 SLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGE 205
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
K+ DFG++ D++ + GT Y++PE + G ++++D++S G+ ++E+ GR
Sbjct: 206 IKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 116
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + ++HRDIK N+LL KI DFG + P + +
Sbjct: 117 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DDLC 170
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 129/278 (46%), Gaps = 42/278 (15%)
Query: 10 IAVKPLSAE-SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
+AVK L + +++ + + ++E+ + + +H N++ L+G C Q ++ EY +L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 68 RVLLGATKANIKLNWE-----------KRSDICV-GIAKGLAFLHEELVPHIVHRDIKAS 115
L ++ +++ K C +A+G+ +L + +HRD+ A
Sbjct: 130 EYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 116 NILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADV 170
N+L+ + KI DFGLA+ +I +I T G ++APE + T ++DV
Sbjct: 187 NVLVTENNVMKIADFGLAR----DINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDV 242
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ EI + G G + L + + H+ +KP NE+
Sbjct: 243 WSFGVLMWEIFT--LGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NELYMM 291
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLTKNIRL--NEEEL 266
M+ C A S+RP Q+++ L + + L NEE L
Sbjct: 292 MRD---CWHAVPSQRPTFKQLVEDLDRILTLTTNEEYL 326
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 129/278 (46%), Gaps = 42/278 (15%)
Query: 10 IAVKPLSAE-SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
+AVK L + +++ + + ++E+ + + +H N++ L+G C Q ++ EY +L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 68 RVLLGATKANIKLNWE-----------KRSDICV-GIAKGLAFLHEELVPHIVHRDIKAS 115
L ++ +++ K C +A+G+ +L + +HRD+ A
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 116 NILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADV 170
N+L+ + KI DFGLA+ +I +I T G ++APE + T ++DV
Sbjct: 187 NVLVTENNVMKIADFGLAR----DINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDV 242
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ EI + G G + L + + H+ +KP NE+
Sbjct: 243 WSFGVLMWEIFT--LGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NELYMM 291
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLTKNIRL--NEEEL 266
M+ C A S+RP Q+++ L + + L NEE L
Sbjct: 292 MRD---CWHAVPSQRPTFKQLVEDLDRILTLTTNEEYL 326
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY + + L +K + ++ +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATY 118
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + V +HRDIK N+LL KI DFG + P + +
Sbjct: 119 ITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLX 172
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L +K + ++ +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK----FDEQRTATY 113
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + V +HRDIK N+LL KI DFG + P + +
Sbjct: 114 ITELANALSYCHSKKV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---AALC 167
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT YL PE + G K D++S GVL E + G+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C + ++ E++ +L
Sbjct: 39 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 97
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + + I+ + +L ++ + +HRD+ A N L+ + K+ D
Sbjct: 98 LRECNRQEVSAV--VLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVAD 152
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++L + + APE + + ++K+DV++FGVL+ EI +
Sbjct: 153 FGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 6 NGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
+G +A K + E K +R + I E+ L P +V G + E+++
Sbjct: 30 SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 89
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SLD+VL K ++ + + + + KGL +L E+ I+HRD+K SNIL++
Sbjct: 90 SLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGE 143
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
K+ DFG++ D++ + GT Y++PE + G ++++D++S G+ ++E+ GR
Sbjct: 144 IKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 6 NGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
+G +A K + E K +R + I E+ L P +V G + E+++
Sbjct: 57 SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 116
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SLD+VL K ++ + + + + KGL +L E+ I+HRD+K SNIL++
Sbjct: 117 SLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGE 170
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
K+ DFG++ D++ + GT Y++PE + G ++++D++S G+ ++E+ GR
Sbjct: 171 IKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 6 NGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
+G +A K + E K +R + I E+ L P +V G + E+++
Sbjct: 30 SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 89
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SLD+VL A + + + + + + KGL +L E+ I+HRD+K SNIL++
Sbjct: 90 SLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGE 143
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
K+ DFG++ D++ + GT Y++PE + G ++++D++S G+ ++E+ GR
Sbjct: 144 IKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Query: 6 NGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
+G +A K + E K +R + I E+ L P +V G + E+++
Sbjct: 33 SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 92
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SLD+VL K ++ + + + + KGL +L E+ I+HRD+K SNIL++
Sbjct: 93 SLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGE 146
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
K+ DFG++ I + GT Y++PE + G ++++D++S G+ ++E+ GR
Sbjct: 147 IKLCDFGVSGQL---IDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 6 NGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
+G +A K + E K +R + I E+ L P +V G + E+++
Sbjct: 30 SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 89
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SLD+VL K ++ + + + + KGL +L E+ I+HRD+K SNIL++
Sbjct: 90 SLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGE 143
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
K+ DFG++ D++ + GT Y++PE + G ++++D++S G+ ++E+ GR
Sbjct: 144 IKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 6 NGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
+G +A K + E K +R + I E+ L P +V G + E+++
Sbjct: 30 SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 89
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SLD+VL K ++ + + + + KGL +L E+ I+HRD+K SNIL++
Sbjct: 90 SLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGE 143
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
K+ DFG++ D++ + GT Y++PE + G ++++D++S G+ ++E+ GR
Sbjct: 144 IKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 6 NGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
+G +A K + E K +R + I E+ L P +V G + E+++
Sbjct: 30 SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 89
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
SLD+VL K ++ + + + + KGL +L E+ I+HRD+K SNIL++
Sbjct: 90 SLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGE 143
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
K+ DFG++ D++ + GT Y++PE + G ++++D++S G+ ++E+ GR
Sbjct: 144 IKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 12/176 (6%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C + ++ E++ +L
Sbjct: 46 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 70 LLGATKANIK---LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK 126
L + + L + + I+ + +L ++ + +HRD+ A N L+ + K
Sbjct: 105 LRECNRQEVSAVVLLY-----MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVK 156
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
+ DFGL++L + + APE + + ++K+DV++FGVL+ EI +
Sbjct: 157 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C + ++ E++ +L
Sbjct: 41 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 99
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + + I+ + +L ++ + +HRD+ A N L+ + K+ D
Sbjct: 100 LRECNRQEVSAV--VLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVAD 154
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++L + + APE + + ++K+DV++FGVL+ EI +
Sbjct: 155 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 12/176 (6%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C + ++ E++ +L
Sbjct: 41 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 70 LLGATKANIK---LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK 126
L + + L + + I+ + +L ++ + +HRD+ A N L+ + K
Sbjct: 100 LRECNRQEVSAVVLLY-----MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVK 151
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
+ DFGL++L + + APE + + ++K+DV++FGVL+ EI +
Sbjct: 152 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 12/176 (6%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C + ++ E++ +L
Sbjct: 41 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 99
Query: 70 LLGATKANIK---LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK 126
L + + L + + I+ + +L ++ + +HRD+ A N L+ + K
Sbjct: 100 LRECNRQEVSAVVLLY-----MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVK 151
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
+ DFGL++L + + APE + + ++K+DV++FGVL+ EI +
Sbjct: 152 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C + ++ E++ +L
Sbjct: 41 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + + I+ + +L ++ + +HRD+ A N L+ + K+ D
Sbjct: 100 LRECNRQEVSAV--VLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVAD 154
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++L + + APE + + ++K+DV++FGVL+ EI +
Sbjct: 155 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 12/176 (6%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C + ++ E++ +L
Sbjct: 39 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 97
Query: 70 LLGATKANIK---LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK 126
L + + L + + I+ + +L ++ + +HRD+ A N L+ + K
Sbjct: 98 LRECNRQEVSAVVLLY-----MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVK 149
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
+ DFGL++L + + APE + + ++K+DV++FGVL+ EI +
Sbjct: 150 VADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 93/195 (47%), Gaps = 27/195 (13%)
Query: 10 IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L K E + E + + +P +V LIG C Q +LV E L +
Sbjct: 40 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHK 98
Query: 69 VLLGATKANIKLNWEKRSDICVG--------IAKGLAFLHEELVPHIVHRDIKASNILLD 120
L+G KR +I V ++ G+ +L E+ + VHRD+ A N+LL
Sbjct: 99 FLVG-----------KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLV 144
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVL 178
KI DFGL+K + ++ T R AG + APE + + + ++DV+S+GV +
Sbjct: 145 NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMW 204
Query: 179 EIIS-GRNSGKAMWG 192
E +S G+ K M G
Sbjct: 205 EALSYGQKPYKKMKG 219
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 126/275 (45%), Gaps = 40/275 (14%)
Query: 10 IAVKPLSAE-SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
+AVK L + +++ + + ++E+ + + +H N++ L+G C Q ++ EY +L
Sbjct: 116 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 175
Query: 68 RVLLGATKANIKLNWE-----------KRSDICV-GIAKGLAFLHEELVPHIVHRDIKAS 115
L ++ +++ K C +A+G+ +L + +HRD+ A
Sbjct: 176 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 232
Query: 116 NILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADV 170
N+L+ + KI DFGLA+ +I +I T G ++APE + T ++DV
Sbjct: 233 NVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 288
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ EI + G G + L + + H+ +KP NE+
Sbjct: 289 WSFGVLMWEIFTL--GGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NELYMM 337
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 265
M+ C A S+RP Q+++ L + + L E
Sbjct: 338 MRD---CWHAVPSQRPTFKQLVEDLDRILTLTTNE 369
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 17/186 (9%)
Query: 5 TNGRRIAVKP--LSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVE 62
+ GR +A+K L AE + I EI L + HPN+V LI LV+E++E
Sbjct: 43 SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME 102
Query: 63 NN---SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILL 119
+ LD G + IK+ + +G+A H+ I+HRD+K N+L+
Sbjct: 103 KDLKKVLDENKTGLQDSQIKI-------YLYQLLRGVAHCHQH---RILHRDLKPQNLLI 152
Query: 120 DQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
+ + K+ DFGLA+ F + T + T Y AP+ ++G + + D++S G +
Sbjct: 153 NSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFA 211
Query: 179 EIISGR 184
E+I+G+
Sbjct: 212 EMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 17/186 (9%)
Query: 5 TNGRRIAVKP--LSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVE 62
+ GR +A+K L AE + I EI L + HPN+V LI LV+E++E
Sbjct: 43 SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME 102
Query: 63 NN---SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILL 119
+ LD G + IK+ + +G+A H+ I+HRD+K N+L+
Sbjct: 103 KDLKKVLDENKTGLQDSQIKI-------YLYQLLRGVAHCHQH---RILHRDLKPQNLLI 152
Query: 120 DQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
+ + K+ DFGLA+ F + T + T Y AP+ ++G + + D++S G +
Sbjct: 153 NSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFA 211
Query: 179 EIISGR 184
E+I+G+
Sbjct: 212 EMITGK 217
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 128/276 (46%), Gaps = 42/276 (15%)
Query: 10 IAVKPLSAE-SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
+AVK L + +++ + + ++E+ + + +H N++ L+G C Q ++ EY +L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLR 129
Query: 68 RVLLGATKANIKLNWE-----------KRSDICV-GIAKGLAFLHEELVPHIVHRDIKAS 115
L ++ +++ K C +A+G+ +L + +HRD+ A
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 116 NILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADV 170
N+L+ + KI DFGLA+ +I +I T G ++APE + T ++DV
Sbjct: 187 NVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 242
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ EI + G G + L + + H+ +KP NE+
Sbjct: 243 WSFGVLMWEIFT--LGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NELYMM 291
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLTKNIRL--NEE 264
M+ C A S+RP Q+++ L + + L NEE
Sbjct: 292 MRD---CWHAVPSQRPTFKQLVEDLDRILTLTTNEE 324
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 15/182 (8%)
Query: 7 GRRIAVKPLSAE---SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G ++AVK L+ + S V + EI L RHP++++L + +V EYV
Sbjct: 41 GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG 100
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
L N +L+ ++ + I G+ + H +V VHRD+K N+LLD
Sbjct: 101 GEL----FDYICKNGRLDEKESRRLFQQILSGVDYCHRHMV---VHRDLKPENVLLDAHM 153
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM--KADVYSFGVLVLEII 181
N KI DFGL+ + D G+ Y APE V+ G+L + D++S GV++ ++
Sbjct: 154 NAKIADFGLSNMMSDG--EFLRXSCGSPNYAAPE-VISGRLYAGPEVDIWSSGVILYALL 210
Query: 182 SG 183
G
Sbjct: 211 CG 212
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 86/173 (49%), Gaps = 6/173 (3%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C +V EY+ +L
Sbjct: 60 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDY 118
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + + I+ + +L ++ + +HRD+ A N L+ + K+ D
Sbjct: 119 LRECNREEVTAV--VLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVAD 173
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++L + + APE + ++K+DV++FGVL+ EI +
Sbjct: 174 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 128/276 (46%), Gaps = 42/276 (15%)
Query: 10 IAVKPLSAE-SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
+AVK L + +++ + + ++E+ + + +H N++ L+G C Q ++ EY +L
Sbjct: 70 VAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 68 RVLLGATKANIKLNWE-----------KRSDICV-GIAKGLAFLHEELVPHIVHRDIKAS 115
L ++ +++ K C +A+G+ +L + +HRD+ A
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 116 NILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADV 170
N+L+ + KI DFGLA+ +I +I T G ++APE + T ++DV
Sbjct: 187 NVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 242
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ EI + G G + L + + H+ +KP NE+
Sbjct: 243 WSFGVLMWEIFT--LGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NELYMM 291
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLTKNIRL--NEE 264
M+ C A S+RP Q+++ L + + L NEE
Sbjct: 292 MRD---CWHAVPSQRPTFKQLVEDLDRILTLTTNEE 324
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 128/276 (46%), Gaps = 42/276 (15%)
Query: 10 IAVKPLSAE-SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
+AVK L + +++ + + ++E+ + + +H N++ L+G C Q ++ EY +L
Sbjct: 62 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 121
Query: 68 RVLLGATKANIKLNWE-----------KRSDICV-GIAKGLAFLHEELVPHIVHRDIKAS 115
L ++ +++ K C +A+G+ +L + +HRD+ A
Sbjct: 122 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 178
Query: 116 NILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADV 170
N+L+ + KI DFGLA+ +I +I T G ++APE + T ++DV
Sbjct: 179 NVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 234
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ EI + G G + L + + H+ +KP NE+
Sbjct: 235 WSFGVLMWEIFT--LGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NELYMM 283
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLTKNIRL--NEE 264
M+ C A S+RP Q+++ L + + L NEE
Sbjct: 284 MRD---CWHAVPSQRPTFKQLVEDLDRILTLTTNEE 316
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 25/196 (12%)
Query: 9 RIAVKPLSAESKQGVRE-FITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSL 66
++AVK L + + +E ++E+ +S++ +H N+V L+G C G +++ EY L
Sbjct: 63 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 122
Query: 67 DRVLLGATKANIKLNWEKRSD-------------------ICVGIAKGLAFLHEELVPHI 107
L +A + + D +A+G+AFL + +
Sbjct: 123 LNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NC 179
Query: 108 VHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG-TTGYLAPEYVLGGQLTM 166
+HRD+ A N+LL KIGDFGLA+ ++ +I A ++APE + T+
Sbjct: 180 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV 239
Query: 167 KADVYSFGVLVLEIIS 182
++DV+S+G+L+ EI S
Sbjct: 240 QSDVWSYGILLWEIFS 255
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 127/273 (46%), Gaps = 36/273 (13%)
Query: 10 IAVKPLSAE-SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
+AVK L + +++ + + ++E+ + + +H N++ L+G C Q ++ EY +L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 68 RVLLGATKANIKLNWE-----------KRSDICV-GIAKGLAFLHEELVPHIVHRDIKAS 115
L ++ +++ K C +A+G+ +L + +HRD+ A
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 116 NILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG--TTGYLAPEYVLGGQLTMKADVYSF 173
N+L+ + KI DFGLA+ +NI + G ++APE + T ++DV+SF
Sbjct: 187 NVLVTENNVMKIADFGLARDI-NNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 174 GVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKV 233
GVL+ EI + G G + L + + H+ +KP NE+ M+
Sbjct: 246 GVLMWEIFT--LGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NELYMMMRD 294
Query: 234 AFFCTQAAASRRPQMNQVIKMLTKNIRL--NEE 264
C A S+RP Q+++ L + + L NEE
Sbjct: 295 ---CWHAVPSQRPTFKQLVEDLDRILTLTTNEE 324
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 115/242 (47%), Gaps = 31/242 (12%)
Query: 24 REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE 83
+EF E+ +SN+ HPN+V+L G R +V E+V L LL + W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP---IKWS 122
Query: 84 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD--QEFNP---KIGDFGLAKLFPD 138
+ + + IA G+ ++ + P IVHRD+++ NI L E P K+ DFG ++
Sbjct: 123 VKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ---- 177
Query: 139 NITHITTRIAGTTGYLAPEYVLGGQ--LTMKADVYSFGVLVLEIISGRNS-GKAMWGQMN 195
H + + G ++APE + + T KAD YSF +++ I++G + +G++
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI- 236
Query: 196 KFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 255
KF+ + +EE L PE + PP R V C +RP + ++K L
Sbjct: 237 KFI-----NMIREEG-LRPTIPE--DCPP----RLRNVIELCWSGDPKKRPHFSYIVKEL 284
Query: 256 TK 257
++
Sbjct: 285 SE 286
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 115/242 (47%), Gaps = 31/242 (12%)
Query: 24 REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE 83
+EF E+ +SN+ HPN+V+L G R +V E+V L LL + W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP---IKWS 122
Query: 84 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD--QEFNP---KIGDFGLAKLFPD 138
+ + + IA G+ ++ + P IVHRD+++ NI L E P K+ DF L++
Sbjct: 123 VKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ---- 177
Query: 139 NITHITTRIAGTTGYLAPEYVLGGQ--LTMKADVYSFGVLVLEIISGRNS-GKAMWGQMN 195
H + + G ++APE + + T KAD YSF +++ I++G + +G++
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI- 236
Query: 196 KFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 255
KF+ + +EE L PE + PP R V C +RP + ++K L
Sbjct: 237 KFI-----NMIREEG-LRPTIPE--DCPP----RLRNVIELCWSGDPKKRPHFSYIVKEL 284
Query: 256 TK 257
++
Sbjct: 285 SE 286
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 128/276 (46%), Gaps = 42/276 (15%)
Query: 10 IAVKPLSAE-SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
+AVK L + +++ + + ++E+ + + +H N++ L+G C Q ++ EY +L
Sbjct: 59 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 118
Query: 68 RVLLGATKANIKLNWE-----------KRSDICV-GIAKGLAFLHEELVPHIVHRDIKAS 115
L ++ +++ K C +A+G+ +L + +HRD+ A
Sbjct: 119 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 175
Query: 116 NILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADV 170
N+L+ + KI DFGLA+ +I +I T G ++APE + T ++DV
Sbjct: 176 NVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 231
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ EI + G G + L + + H+ +KP NE+
Sbjct: 232 WSFGVLMWEIFT--LGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NELYMM 280
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLTKNIRL--NEE 264
M+ C A S+RP Q+++ L + + L NEE
Sbjct: 281 MRD---CWHAVPSQRPTFKQLVEDLDRILTLTTNEE 313
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 128/276 (46%), Gaps = 42/276 (15%)
Query: 10 IAVKPLSAE-SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
+AVK L + +++ + + ++E+ + + +H N++ L+G C Q ++ EY +L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLR 129
Query: 68 RVLLGATKANIKLNWE-----------KRSDICV-GIAKGLAFLHEELVPHIVHRDIKAS 115
L ++ +++ K C +A+G+ +L + +HRD+ A
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 116 NILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADV 170
N+L+ + KI DFGLA+ +I +I T G ++APE + T ++DV
Sbjct: 187 NVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 242
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ EI + G G + L + + H+ +KP NE+
Sbjct: 243 WSFGVLMWEIFT--LGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NELYMM 291
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLTKNIRL--NEE 264
M+ C A S+RP Q+++ L + + L NEE
Sbjct: 292 MRD---CWHAVPSQRPTFKQLVEDLDRILTLTTNEE 324
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 94/184 (51%), Gaps = 12/184 (6%)
Query: 5 TNGRRIAVKPLSAESKQGVREFI-TEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
++G +K ++ + Q E I EI L ++ HPN++++ +V E E
Sbjct: 45 SSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEG 104
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
L ++ A L+ +++ + LA+ H + H+VH+D+K NIL Q+
Sbjct: 105 GELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILF-QDT 160
Query: 124 NP----KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLE 179
+P KI DFGLA+LF + +T AGT Y+APE V +T K D++S GV++
Sbjct: 161 SPHSPIKIIDFGLAELFKSD--EHSTNAAGTALYMAPE-VFKRDVTFKCDIWSAGVVMYF 217
Query: 180 IISG 183
+++G
Sbjct: 218 LLTG 221
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+ S++RHPN++ L G TR L+ EY ++ R L ++ + ++ +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR----FDEQRTATY 117
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
+A L++ H + V +HRDIK N+LL KI DFG + P + +
Sbjct: 118 ITELANALSYCHSKRV---IHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT---LC 171
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
GT YL PE + G K D++S GVL E + G
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 90/172 (52%), Gaps = 17/172 (9%)
Query: 18 ESKQGVREF---ITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVL--L 71
E K G + F ++ + ++ H ++V L+G C G+ LV +Y+ SL D V
Sbjct: 69 EDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHR 127
Query: 72 GATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFG 131
GA + LNW V IAKG+ +L E +VHR++ A N+LL ++ DFG
Sbjct: 128 GALGPQLLLNW------GVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFG 178
Query: 132 LAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
+A L P + + A T ++A E + G+ T ++DV+S+GV V E+++
Sbjct: 179 VADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 90/172 (52%), Gaps = 17/172 (9%)
Query: 18 ESKQGVREF---ITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVL--L 71
E K G + F ++ + ++ H ++V L+G C G+ LV +Y+ SL D V
Sbjct: 51 EDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHR 109
Query: 72 GATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFG 131
GA + LNW V IAKG+ +L E +VHR++ A N+LL ++ DFG
Sbjct: 110 GALGPQLLLNW------GVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFG 160
Query: 132 LAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
+A L P + + A T ++A E + G+ T ++DV+S+GV V E+++
Sbjct: 161 VADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 27/208 (12%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGT----RRILVYEYVENNS 65
+AVK + KQ + EI + ++H NL++ I +G+ L+ + + S
Sbjct: 41 VAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGS 99
Query: 66 LDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL--------VPHIVHRDIKASNI 117
L L K NI + W + + +++GL++LHE++ P I HRD K+ N+
Sbjct: 100 LTDYL----KGNI-ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNV 154
Query: 118 LLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTGYLAPEYVLGG-----QLTMKADVY 171
LL + + DFGLA F P T GT Y+APE + G ++ D+Y
Sbjct: 155 LLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMY 214
Query: 172 SFGVLVLEIISGRNSGKAMWGQMNKFLL 199
+ G+++ E++S KA G +++++L
Sbjct: 215 AMGLVLWELVS---RCKAADGPVDEYML 239
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 89/173 (51%), Gaps = 6/173 (3%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C + ++ E++ +L
Sbjct: 245 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 303
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + N + I+ + +L ++ + +HR++ A N L+ + K+ D
Sbjct: 304 LRECNRQEV--NAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVAD 358
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++L + + APE + + ++K+DV++FGVL+ EI +
Sbjct: 359 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 88/189 (46%), Gaps = 16/189 (8%)
Query: 4 LTNGRRIAVKPLSAESKQGVR---EFITEIMTLSNVRHPNLVELIGC----CVQGTRRIL 56
L + R +AVK L A+ + F E + + HP +V + G +
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 57 VYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
V EYV+ +L ++ K E +D C + L F H+ I+HRD+K +N
Sbjct: 94 VMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC----QALNFSHQN---GIIHRDVKPAN 146
Query: 117 ILLDQEFNPKIGDFGLAKLFPD--NITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFG 174
IL+ K+ DFG+A+ D N T + GT YL+PE G + ++DVYS G
Sbjct: 147 ILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 175 VLVLEIISG 183
++ E+++G
Sbjct: 207 CVLYEVLTG 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 16/189 (8%)
Query: 4 LTNGRRIAVKPLSAESKQGVR---EFITEIMTLSNVRHPNLVELIGC----CVQGTRRIL 56
L + R +AVK L A+ + F E + + HP +V + G +
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 57 VYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
V EYV+ +L ++ K E +D C + L F H+ I+HRD+K +N
Sbjct: 94 VMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC----QALNFSHQN---GIIHRDVKPAN 146
Query: 117 ILLDQEFNPKIGDFGLAKLFPDNITHITTRIA--GTTGYLAPEYVLGGQLTMKADVYSFG 174
I++ K+ DFG+A+ D+ +T A GT YL+PE G + ++DVYS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 175 VLVLEIISG 183
++ E+++G
Sbjct: 207 CVLYEVLTG 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 16/189 (8%)
Query: 4 LTNGRRIAVKPLSAESKQGVR---EFITEIMTLSNVRHPNLVELIGC----CVQGTRRIL 56
L + R +AVK L A+ + F E + + HP +V + G +
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 57 VYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
V EYV+ +L ++ K E +D C + L F H+ I+HRD+K +N
Sbjct: 94 VMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC----QALNFSHQN---GIIHRDVKPAN 146
Query: 117 ILLDQEFNPKIGDFGLAKLFPDNITHITTRIA--GTTGYLAPEYVLGGQLTMKADVYSFG 174
I++ K+ DFG+A+ D+ +T A GT YL+PE G + ++DVYS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 175 VLVLEIISG 183
++ E+++G
Sbjct: 207 CVLYEVLTG 215
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 128/276 (46%), Gaps = 42/276 (15%)
Query: 10 IAVKPLSAE-SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
+AVK L + +++ + + ++E+ + + +H N++ L+G C Q ++ EY +L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 68 RVLLGATKANIKLNWE-----------KRSDICV-GIAKGLAFLHEELVPHIVHRDIKAS 115
L ++ +++ K C +A+G+ +L + +HRD+ A
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 116 NILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADV 170
N+L+ + +I DFGLA+ +I +I T G ++APE + T ++DV
Sbjct: 187 NVLVTENNVMRIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 242
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ EI + G G + L + + H+ +KP NE+
Sbjct: 243 WSFGVLMWEIFT--LGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NELYMM 291
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLTKNIRL--NEE 264
M+ C A S+RP Q+++ L + + L NEE
Sbjct: 292 MRD---CWHAVPSQRPTFKQLVEDLDRILTLTTNEE 324
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 89/173 (51%), Gaps = 6/173 (3%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C + ++ E++ +L
Sbjct: 287 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 345
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + N + I+ + +L ++ + +HR++ A N L+ + K+ D
Sbjct: 346 LRECNRQEV--NAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVAD 400
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++L + + APE + + ++K+DV++FGVL+ EI +
Sbjct: 401 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 125/271 (46%), Gaps = 40/271 (14%)
Query: 10 IAVKPLSAE-SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
+AVK L + +++ + + ++E+ + + +H N++ L+G C Q ++ EY +L
Sbjct: 57 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 116
Query: 68 RVLLGATKANIKLNWE-----------KRSDICV-GIAKGLAFLHEELVPHIVHRDIKAS 115
L ++ +++ K C +A+G+ +L + +HRD+ A
Sbjct: 117 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLTAR 173
Query: 116 NILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADV 170
N+L+ + KI DFGLA+ +I +I T G ++APE + T ++DV
Sbjct: 174 NVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 229
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ EI + G G + L + + H+ +KP NE+
Sbjct: 230 WSFGVLMWEIFT--LGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NELYMM 278
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLTKNIRL 261
M+ C A S+RP Q+++ L + + L
Sbjct: 279 MRD---CWHAVPSQRPTFKQLVEDLDRILTL 306
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 38 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 97
HP LV L C +R V EYV L + + KL E I+ L
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALN 120
Query: 98 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK--LFPDNITHITTRIAGTTGYLA 155
+LHE I++RD+K N+LLD E + K+ D+G+ K L P + T + GT Y+A
Sbjct: 121 YLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIA 174
Query: 156 PEYVLGGQLTMKADVYSFGVLVLEIISGRN 185
PE + G D ++ GVL+ E+++GR+
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAGRS 204
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 38 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 97
HP LV L C +R V EYV L + + KL E I+ L
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALN 135
Query: 98 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK--LFPDNITHITTRIAGTTGYLA 155
+LHE I++RD+K N+LLD E + K+ D+G+ K L P + T + GT Y+A
Sbjct: 136 YLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIA 189
Query: 156 PEYVLGGQLTMKADVYSFGVLVLEIISGRN 185
PE + G D ++ GVL+ E+++GR+
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRS 219
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 117/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T ++++ LD
Sbjct: 48 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDY 107
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 108 V--REHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 156
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFGLAKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 157 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 216
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 217 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMVKCWMIDA 261
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 262 DSRPKFRELIIEFSKMARDPQRYLVIQG 289
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 38 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 97
HP LV L C +R V EYV L + + KL E I+ L
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALN 167
Query: 98 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK--LFPDNITHITTRIAGTTGYLA 155
+LHE I++RD+K N+LLD E + K+ D+G+ K L P + T + GT Y+A
Sbjct: 168 YLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYIA 221
Query: 156 PEYVLGGQLTMKADVYSFGVLVLEIISGRN 185
PE + G D ++ GVL+ E+++GR+
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRS 251
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 38 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 97
HP LV L C +R V EYV L + + KL E I+ L
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALN 124
Query: 98 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK--LFPDNITHITTRIAGTTGYLA 155
+LHE I++RD+K N+LLD E + K+ D+G+ K L P + T + GT Y+A
Sbjct: 125 YLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIA 178
Query: 156 PEYVLGGQLTMKADVYSFGVLVLEIISGRN 185
PE + G D ++ GVL+ E+++GR+
Sbjct: 179 PEILRGEDYGFSVDWWALGVLMFEMMAGRS 208
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 16/185 (8%)
Query: 8 RRIAVKPLSAESKQGVR---EFITEIMTLSNVRHPNLVELIGC----CVQGTRRILVYEY 60
R +AVK L A+ + F E + + HP +V + G +V EY
Sbjct: 38 RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEY 97
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
V+ +L ++ K E +D C + L F H+ I+HRD+K +NI++
Sbjct: 98 VDGVTLRDIVHTEGPMTPKRAIEVIADAC----QALNFSHQN---GIIHRDVKPANIMIS 150
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIA--GTTGYLAPEYVLGGQLTMKADVYSFGVLVL 178
K+ DFG+A+ D+ +T A GT YL+PE G + ++DVYS G ++
Sbjct: 151 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 179 EIISG 183
E+++G
Sbjct: 211 EVLTG 215
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 116/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T +++ LD
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDY 106
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 107 V--REHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 155
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFGLAKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 216 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMVKCWMIDA 260
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 261 DSRPKFRELIIEFSKMARDPQRYLVIQG 288
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 117/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T ++++ LD
Sbjct: 48 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDY 107
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 108 V--REHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 156
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFGLAKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 157 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 216
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 217 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMVKCWMIDA 261
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 262 DSRPKFRELIIEFSKMARDPQRYLVIQG 289
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 117/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T ++++ LD
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDY 106
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 107 V--REHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 155
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFGLAKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 216 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMVKCWMIDA 260
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 261 DSRPKFRELIIEFSKMARDPQRYLVIQG 288
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 117/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T ++++ LD
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDY 109
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 110 V--REHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 158
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFGLAKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 159 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 218
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 219 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMVKCWMIDA 263
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 264 DSRPKFRELIIEFSKMARDPQRYLVIQG 291
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 117/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T ++++ LD
Sbjct: 51 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDY 110
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 111 VR--EHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 159
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFGLAKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 160 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 219
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 220 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMVKCWMIDA 264
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 265 DSRPKFRELIIEFSKMARDPQRYLVIQG 292
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 26 FITEIMTLSNVRHPNLVELIGCCVQGTRRIL--VYEYVENNSLDRVLLGATKANIKLNWE 83
++E+ L ++HPN+V + T L V EY E L V+ TK L+ E
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 84 KRSDICVGIAKGLAFLHE--ELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT 141
+ + L H + ++HRD+K +N+ LD + N K+GDFGLA++ + +
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS 171
Query: 142 HITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
T GT Y++PE + K+D++S G L+ E+ +
Sbjct: 172 FAKT-FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 10/182 (5%)
Query: 5 TNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRIL--VYEYVE 62
G +AVK L R+F EI L + +V+ G R+ L V EY+
Sbjct: 50 NTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP 109
Query: 63 NNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQE 122
+ L L + +L+ + I KG+ +L VHRD+ A NIL++ E
Sbjct: 110 SGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESE 163
Query: 123 FNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ KI DFGLAKL P + + R G + + APE + + ++DV+SFGV++ E+
Sbjct: 164 AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 223
Query: 181 IS 182
+
Sbjct: 224 FT 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 10/182 (5%)
Query: 5 TNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRIL--VYEYVE 62
G +AVK L R+F EI L + +V+ G R+ L V EY+
Sbjct: 38 NTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP 97
Query: 63 NNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQE 122
+ L L + +L+ + I KG+ +L VHRD+ A NIL++ E
Sbjct: 98 SGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESE 151
Query: 123 FNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ KI DFGLAKL P + + R G + + APE + + ++DV+SFGV++ E+
Sbjct: 152 AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 211
Query: 181 IS 182
+
Sbjct: 212 FT 213
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 117/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T ++++ LD
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDY 108
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 109 V--REHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 157
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFGLAKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 158 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 218 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMVKCWMIDA 262
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 263 DSRPKFRELIIEFSKMARDPQRYLVIQG 290
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 10/182 (5%)
Query: 5 TNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRIL--VYEYVE 62
G +AVK L R+F EI L + +V+ G R+ L V EY+
Sbjct: 37 NTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP 96
Query: 63 NNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQE 122
+ L L + +L+ + I KG+ +L VHRD+ A NIL++ E
Sbjct: 97 SGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESE 150
Query: 123 FNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ KI DFGLAKL P + + R G + + APE + + ++DV+SFGV++ E+
Sbjct: 151 AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 210
Query: 181 IS 182
+
Sbjct: 211 FT 212
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 13/157 (8%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNS-LDRVLLGATKANIKLNWEKRSD 87
EI LS P + G ++ T+ ++ EY+ S LD + G L +
Sbjct: 67 EITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP------LEETYIAT 120
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT-TR 146
I I KGL +LH E +HRDIKA+N+LL ++ + K+ DFG+A D T I
Sbjct: 121 ILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNX 175
Query: 147 IAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
GT ++APE + KAD++S G+ +E+ G
Sbjct: 176 FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKG 212
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 117/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T ++++ LD
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDY 113
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 114 V--REHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 162
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFGLAKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 163 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 222
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 223 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMVKCWMIDA 267
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 268 DSRPKFRELIIEFSKMARDPQRYLVIQG 295
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 116/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T +++ LD
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDY 113
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 114 VR--EHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 162
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFGLAKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 163 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 222
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 223 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMVKCWMIDA 267
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 268 DSRPKFRELIIEFSKMARDPQRYLVIQG 295
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 116/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T +++ LD
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDY 106
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 107 V--REHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 155
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFGLAKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 216 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMVKCWMIDA 260
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 261 DSRPKFRELIIEFSKMARDPQRYLVIQG 288
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 116/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T +++ LD
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDY 106
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 107 V--REHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 155
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFGLAKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 216 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMVKCWMIDA 260
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 261 DSRPKFRELIIEFSKMARDPQRYLVIQG 288
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 116/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T +++ LD
Sbjct: 72 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDY 131
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 132 VR--EHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 180
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFGLAKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 181 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 240
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 241 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMVKCWMIDA 285
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 286 DSRPKFRELIIEFSKMARDPQRYLVIQG 313
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 116/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T +++ LD
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDY 109
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 110 V--REHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 158
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFGLAKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 159 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 218
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 219 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMVKCWMIDA 263
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 264 DSRPKFRELIIEFSKMARDPQRYLVIQG 291
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 85/173 (49%), Gaps = 7/173 (4%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+A+K + E EFI E + N+ H LV+L G C + ++ EY+ N L
Sbjct: 36 VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 94
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + ++ ++C + + + +L + +HRD+ A N L++ + K+ D
Sbjct: 95 L---REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSD 148
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++ D+ + + PE ++ + + K+D+++FGVL+ EI S
Sbjct: 149 FGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNS-LDRVLLGATKANIKLNWEKRSD 87
EI LS P + + G ++ T+ ++ EY+ S LD + G L+ + +
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP------LDETQIAT 108
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 147
I I KGL +LH E +HRDIKA+N+LL + K+ DFG+A D T +
Sbjct: 109 ILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV 165
Query: 148 AGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
GT ++APE + KAD++S G+ +E+ G
Sbjct: 166 -GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 200
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 116/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T +++ LD
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDY 113
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 114 V--REHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 162
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFGLAKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 163 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 222
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 223 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMVKCWMIDA 267
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 268 DSRPKFRELIIEFSKMARDPQRYLVIQG 295
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 26 FITEIMTLSNVRHPNLVELIGCCVQGTRRIL--VYEYVENNSLDRVLLGATKANIKLNWE 83
++E+ L ++HPN+V + T L V EY E L V+ TK L+ E
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 84 KRSDICVGIAKGLAFLHE--ELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT 141
+ + L H + ++HRD+K +N+ LD + N K+GDFGLA++ ++ T
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDT 170
Query: 142 HITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
GT Y++PE + K+D++S G L+ E+ +
Sbjct: 171 SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 12/176 (6%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+AVK L ++ + V EF+ E + ++HPNLV+L+G C + ++ E++ +L
Sbjct: 248 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 306
Query: 70 LLGATKANIK---LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK 126
L + + L + + I+ + +L ++ + +HR++ A N L+ + K
Sbjct: 307 LRECNRQEVSAVVLLY-----MATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVK 358
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
+ DFGL++L + + APE + + ++K+DV++FGVL+ EI +
Sbjct: 359 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 85/173 (49%), Gaps = 7/173 (4%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+A+K + E EFI E + N+ H LV+L G C + ++ EY+ N L
Sbjct: 51 VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 109
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + ++ ++C + + + +L + +HRD+ A N L++ + K+ D
Sbjct: 110 L---REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSD 163
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++ D+ + + PE ++ + + K+D+++FGVL+ EI S
Sbjct: 164 FGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 116/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T +++ LD
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDY 109
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 110 V--REHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 158
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFGLAKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 159 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 218
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 219 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMVKCWMIDA 263
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 264 DSRPKFRELIIEFSKMARDPQRYLVIQG 291
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 16/185 (8%)
Query: 8 RRIAVKPLSAESKQGVR---EFITEIMTLSNVRHPNLVELIGC----CVQGTRRILVYEY 60
R +AVK L A+ + F E + + HP +V + G +V EY
Sbjct: 38 RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 97
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
V+ +L ++ K E +D C + L F H+ I+HRD+K +NI++
Sbjct: 98 VDGVTLRDIVHTEGPMTPKRAIEVIADAC----QALNFSHQN---GIIHRDVKPANIMIS 150
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIA--GTTGYLAPEYVLGGQLTMKADVYSFGVLVL 178
K+ DFG+A+ D+ +T A GT YL+PE G + ++DVYS G ++
Sbjct: 151 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 179 EIISG 183
E+++G
Sbjct: 211 EVLTG 215
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 88/179 (49%), Gaps = 19/179 (10%)
Query: 11 AVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
A K + +S++ + +++ EI L++ HPN+V+L+ ++ E+ ++D V+
Sbjct: 39 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 98
Query: 71 LG----ATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK 126
L T++ I++ +C L +LH+ I+HRD+KA NIL + + K
Sbjct: 99 LELERPLTESQIQV-------VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIK 148
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL-----GGQLTMKADVYSFGVLVLEI 180
+ DFG++ GT ++APE V+ KADV+S G+ ++E+
Sbjct: 149 LADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 116/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T +++ LD
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDY 108
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 109 VR--EHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 157
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFGLAKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 158 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 218 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMVKCWMIDA 262
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 263 DSRPKFRELIIEFSKMARDPQRYLVIQG 290
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 85/173 (49%), Gaps = 7/173 (4%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+A+K + E EFI E + N+ H LV+L G C + ++ EY+ N L
Sbjct: 35 VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 93
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + ++ ++C + + + +L + +HRD+ A N L++ + K+ D
Sbjct: 94 L---REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSD 147
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++ D+ + + PE ++ + + K+D+++FGVL+ EI S
Sbjct: 148 FGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 116/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T +++ LD
Sbjct: 41 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDY 100
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 101 V--REHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 149
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFGLAKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 150 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 209
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 210 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMVKCWMIDA 254
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 255 DSRPKFRELIIEFSKMARDPQRYLVIQG 282
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 93/195 (47%), Gaps = 27/195 (13%)
Query: 10 IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L K E + E + + +P +V LIG C Q +LV E L +
Sbjct: 366 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHK 424
Query: 69 VLLGATKANIKLNWEKRSDICVG--------IAKGLAFLHEELVPHIVHRDIKASNILLD 120
L+G KR +I V ++ G+ +L E+ + VHR++ A N+LL
Sbjct: 425 FLVG-----------KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLV 470
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVL 178
KI DFGL+K + ++ T R AG + APE + + + ++DV+S+GV +
Sbjct: 471 NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMW 530
Query: 179 EIIS-GRNSGKAMWG 192
E +S G+ K M G
Sbjct: 531 EALSYGQKPYKKMKG 545
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 116/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T +++ LD
Sbjct: 53 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDY 112
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 113 VR--EHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 161
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFGLAKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 162 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 221
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 222 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMVKCWMIDA 266
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 267 DSRPKFRELIIEFSKMARDPQRYLVIQG 294
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 85/173 (49%), Gaps = 7/173 (4%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+A+K + E EFI E + N+ H LV+L G C + ++ EY+ N L
Sbjct: 51 VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 109
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + ++ ++C + + + +L + +HRD+ A N L++ + K+ D
Sbjct: 110 L---REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSD 163
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++ D+ + + PE ++ + + K+D+++FGVL+ EI S
Sbjct: 164 FGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 85/173 (49%), Gaps = 7/173 (4%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+A+K + E EFI E + N+ H LV+L G C + ++ EY+ N L
Sbjct: 31 VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 89
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + ++ ++C + + + +L + +HRD+ A N L++ + K+ D
Sbjct: 90 L---REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSD 143
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++ D+ + + PE ++ + + K+D+++FGVL+ EI S
Sbjct: 144 FGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 16/185 (8%)
Query: 8 RRIAVKPLSAESKQGVR---EFITEIMTLSNVRHPNLVELIGC----CVQGTRRILVYEY 60
R +AVK L A+ + F E + + HP +V + G +V EY
Sbjct: 55 RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 114
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
V+ +L ++ K E +D C + L F H+ I+HRD+K +NI++
Sbjct: 115 VDGVTLRDIVHTEGPMTPKRAIEVIADAC----QALNFSHQN---GIIHRDVKPANIMIS 167
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIA--GTTGYLAPEYVLGGQLTMKADVYSFGVLVL 178
K+ DFG+A+ D+ +T A GT YL+PE G + ++DVYS G ++
Sbjct: 168 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 227
Query: 179 EIISG 183
E+++G
Sbjct: 228 EVLTG 232
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 85/173 (49%), Gaps = 7/173 (4%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+A+K + E EFI E + N+ H LV+L G C + ++ EY+ N L
Sbjct: 42 VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 100
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + ++ ++C + + + +L + +HRD+ A N L++ + K+ D
Sbjct: 101 L---REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSD 154
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++ D+ + + PE ++ + + K+D+++FGVL+ EI S
Sbjct: 155 FGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNS-LDRVLLGATKANIKLNWEKRSD 87
EI LS P + + G ++ T+ ++ EY+ S LD + G L+ + +
Sbjct: 75 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP------LDETQIAT 128
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 147
I I KGL +LH E +HRDIKA+N+LL + K+ DFG+A D T +
Sbjct: 129 ILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV 185
Query: 148 AGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT ++APE + KAD++S G+ +E+ G
Sbjct: 186 -GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 127/276 (46%), Gaps = 42/276 (15%)
Query: 10 IAVKPLSAE-SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
+AVK L + +++ + + ++E+ + + +H N++ L+G C Q ++ Y +L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLR 129
Query: 68 RVLLGATKANIKLNWE-----------KRSDICV-GIAKGLAFLHEELVPHIVHRDIKAS 115
L ++ +++ K C +A+G+ +L + +HRD+ A
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 116 NILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADV 170
N+L+ + KI DFGLA+ +I +I T G ++APE + T ++DV
Sbjct: 187 NVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 242
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ EI + G G + L + + H+ +KP NE+
Sbjct: 243 WSFGVLMWEIFT--LGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NELYMM 291
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLTKNIRL--NEE 264
M+ C A S+RP Q+++ L + + L NEE
Sbjct: 292 MRD---CWHAVPSQRPTFKQLVEDLDRILTLTTNEE 324
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 85/173 (49%), Gaps = 7/173 (4%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+A+K + E EFI E + N+ H LV+L G C + ++ EY+ N L
Sbjct: 36 VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 94
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L + + ++ ++C + + + +L + +HRD+ A N L++ + K+ D
Sbjct: 95 L---REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSD 148
Query: 130 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
FGL++ D+ + + PE ++ + + K+D+++FGVL+ EI S
Sbjct: 149 FGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 93/182 (51%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 87 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 140
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + T + T Y APE +LG + A D++S G + E+++
Sbjct: 141 AIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 199
Query: 183 GR 184
R
Sbjct: 200 RR 201
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 10 IAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+AVK L E+ ++ +F E ++ +PN+V+L+G C G L++EY+ L+
Sbjct: 80 VAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNE 139
Query: 69 VLLG--------------ATKANIK------LNWEKRSDICVGIAKGLAFLHEELVPHIV 108
L +T+A + L+ ++ I +A G+A+L E V
Sbjct: 140 FLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFV 196
Query: 109 HRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMK 167
HRD+ N L+ + KI DFGL++ ++ + A ++ PE + + T +
Sbjct: 197 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTE 256
Query: 168 ADVYSFGVLVLEIIS 182
+DV+++GV++ EI S
Sbjct: 257 SDVWAYGVVLWEIFS 271
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 14/151 (9%)
Query: 38 HPNLVELIGCCVQGTRRIL-VYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 96
HP L + C Q + V EY+ L + ++ K + + + I GL
Sbjct: 78 HPFLTHMF-CTFQTKENLFFVMEYLNGGDL----MYHIQSCHKFDLSRATFYAAEIILGL 132
Query: 97 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI--THITTRIAGTTGYL 154
FLH + IV+RD+K NILLD++ + KI DFG+ K +N+ T GT Y+
Sbjct: 133 QFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNEFCGTPDYI 186
Query: 155 APEYVLGGQLTMKADVYSFGVLVLEIISGRN 185
APE +LG + D +SFGVL+ E++ G++
Sbjct: 187 APEILLGQKYNHSVDWWSFGVLLYEMLIGQS 217
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 24/181 (13%)
Query: 11 AVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
A K + +S++ + +++ EI L++ HPN+V+L+ ++ E+ ++D V+
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
Query: 71 LG----ATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK 126
L T++ I++ +C L +LH+ I+HRD+KA NIL + + K
Sbjct: 126 LELERPLTESQIQV-------VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIK 175
Query: 127 IGDFGLAKLFPDNITHITTRIA--GTTGYLAPEYVL-----GGQLTMKADVYSFGVLVLE 179
+ DFG++ N I R + GT ++APE V+ KADV+S G+ ++E
Sbjct: 176 LADFGVS---AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIE 232
Query: 180 I 180
+
Sbjct: 233 M 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 20/179 (11%)
Query: 11 AVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
A K + +S++ + +++ EI L++ HPN+V+L+ ++ E+ ++D V+
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
Query: 71 LG----ATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK 126
L T++ I++ +C L +LH+ I+HRD+KA NIL + + K
Sbjct: 126 LELERPLTESQIQV-------VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIK 175
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL-----GGQLTMKADVYSFGVLVLEI 180
+ DFG++ I + I GT ++APE V+ KADV+S G+ ++E+
Sbjct: 176 LADFGVSAKNTRTIQRRDSFI-GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 93/182 (51%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 34 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 93
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 94 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 147
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + T + T Y APE +LG + A D++S G + E+++
Sbjct: 148 AIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 206
Query: 183 GR 184
R
Sbjct: 207 RR 208
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 24/181 (13%)
Query: 11 AVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
A K + +S++ + +++ EI L++ HPN+V+L+ ++ E+ ++D V+
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
Query: 71 LG----ATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK 126
L T++ I++ +C L +LH+ I+HRD+KA NIL + + K
Sbjct: 126 LELERPLTESQIQV-------VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIK 175
Query: 127 IGDFGLAKLFPDNITHITTR--IAGTTGYLAPEYVL-----GGQLTMKADVYSFGVLVLE 179
+ DFG++ N I R GT ++APE V+ KADV+S G+ ++E
Sbjct: 176 LADFGVS---AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIE 232
Query: 180 I 180
+
Sbjct: 233 M 233
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 93/182 (51%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 34 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 93
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 94 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 147
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + T + T Y APE +LG + A D++S G + E+++
Sbjct: 148 AIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 206
Query: 183 GR 184
R
Sbjct: 207 RR 208
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 93/182 (51%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 87 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 140
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + T + T Y APE +LG + A D++S G + E+++
Sbjct: 141 AIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 183 GR 184
R
Sbjct: 200 RR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 93/182 (51%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 26 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 86 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 139
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + T + T Y APE +LG + A D++S G + E+++
Sbjct: 140 AIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
Query: 183 GR 184
R
Sbjct: 199 RR 200
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 116/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T +++ LD
Sbjct: 57 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDY 116
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 117 V--REHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 165
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFGLAKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 166 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 225
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 226 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMRKCWMIDA 270
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 271 DSRPKFRELIIEFSKMARDPQRYLVIQG 298
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 13/157 (8%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNS-LDRVLLGATKANIKLNWEKRSD 87
EI LS P + + G ++ T+ ++ EY+ S LD + G L+ + +
Sbjct: 70 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP------LDETQIAT 123
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT-TR 146
I I KGL +LH E +HRDIKA+N+LL + K+ DFG+A D T I
Sbjct: 124 ILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNX 178
Query: 147 IAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
GT ++APE + KAD++S G+ +E+ G
Sbjct: 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 215
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 14/151 (9%)
Query: 38 HPNLVELIGCCVQGTRRIL-VYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 96
HP L + C Q + V EY+ L + ++ K + + + I GL
Sbjct: 77 HPFLTHMF-CTFQTKENLFFVMEYLNGGDL----MYHIQSCHKFDLSRATFYAAEIILGL 131
Query: 97 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI--THITTRIAGTTGYL 154
FLH + IV+RD+K NILLD++ + KI DFG+ K +N+ T GT Y+
Sbjct: 132 QFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNXFCGTPDYI 185
Query: 155 APEYVLGGQLTMKADVYSFGVLVLEIISGRN 185
APE +LG + D +SFGVL+ E++ G++
Sbjct: 186 APEILLGQKYNHSVDWWSFGVLLYEMLIGQS 216
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 93/182 (51%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 87 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 140
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + T + T Y APE +LG + A D++S G + E+++
Sbjct: 141 AIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 183 GR 184
R
Sbjct: 200 RR 201
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 116/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T +++ LD
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDY 109
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 110 VR--EHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 158
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFGLAKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 159 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 218
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 219 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMRKCWMIDA 263
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 264 DSRPKFRELIIEFSKMARDPQRYLVIQG 291
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 93/182 (51%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 28 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 87
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 88 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 141
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + T + T Y APE +LG + A D++S G + E+++
Sbjct: 142 AIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
Query: 183 GR 184
R
Sbjct: 201 RR 202
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 93/182 (51%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 26 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 86 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 139
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + T + T Y APE +LG + A D++S G + E+++
Sbjct: 140 AIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
Query: 183 GR 184
R
Sbjct: 199 RR 200
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 127/276 (46%), Gaps = 42/276 (15%)
Query: 10 IAVKPLSAE-SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
+AVK L + +++ + + ++E+ + + +H N++ L+G C Q ++ Y +L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLR 129
Query: 68 RVLLGATKANIKLNWE-----------KRSDICV-GIAKGLAFLHEELVPHIVHRDIKAS 115
L ++ +++ K C +A+G+ +L + +HRD+ A
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 116 NILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADV 170
N+L+ + KI DFGLA+ +I +I T G ++APE + T ++DV
Sbjct: 187 NVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 242
Query: 171 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 230
+SFGVL+ EI + G G + L + + H+ +KP NE+
Sbjct: 243 WSFGVLMWEIFT--LGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NELYMM 291
Query: 231 MKVAFFCTQAAASRRPQMNQVIKMLTKNIRL--NEE 264
M+ C A S+RP Q+++ L + + L NEE
Sbjct: 292 MRD---CWHAVPSQRPTFKQLVEDLDRILTLTTNEE 324
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 93/182 (51%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 31 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 90
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 91 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 144
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + T + T Y APE +LG + A D++S G + E+++
Sbjct: 145 AIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
Query: 183 GR 184
R
Sbjct: 204 RR 205
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 116/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T +++ LD
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDY 106
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 107 V--REHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 155
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFGLAKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 216 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMRKCWMIDA 260
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 261 DSRPKFRELIIEFSKMARDPQRYLVIQG 288
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 13/157 (8%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNS-LDRVLLGATKANIKLNWEKRSD 87
EI LS P + + G ++ T+ ++ EY+ S LD + G L+ + +
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP------LDETQIAT 108
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT-TR 146
I I KGL +LH E +HRDIKA+N+LL + K+ DFG+A D T I
Sbjct: 109 ILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNX 163
Query: 147 IAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
GT ++APE + KAD++S G+ +E+ G
Sbjct: 164 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 200
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 95/187 (50%), Gaps = 17/187 (9%)
Query: 10 IAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L +++ +RE F E M + ++HPN+V L+G + +++ Y + L
Sbjct: 59 VAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHE 118
Query: 69 VL-LGATKANIKLNWEKRS-----------DICVGIAKGLAFLHEELVPHIVHRDIKASN 116
L + + +++ + R+ + IA G+ +L H+VH+D+ N
Sbjct: 119 FLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRN 175
Query: 117 ILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGV 175
+L+ + N KI D GL + ++ + + ++APE ++ G+ ++ +D++S+GV
Sbjct: 176 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGV 235
Query: 176 LVLEIIS 182
++ E+ S
Sbjct: 236 VLWEVFS 242
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 122/273 (44%), Gaps = 37/273 (13%)
Query: 9 RIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
R+AVK ++ + R EF+ E + ++V L+G +G ++V E + + L
Sbjct: 49 RVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL- 107
Query: 68 RVLLGATKANIKLN-------WEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ L + + + N ++ + IA G+A+L+ + VHRD+ A N ++
Sbjct: 108 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVA 164
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGV 175
+F KIGDFG+ + +I G G ++APE + G T +D++SFGV
Sbjct: 165 HDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 220
Query: 176 LVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV-DPELGEYPPNEIIRYMKVA 234
++ EI S L E +Q E+ L+ V D + P N R +
Sbjct: 221 VLWEITS---------------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLM 265
Query: 235 FFCTQAAASRRPQMNQVIKMLTKNIRLNEEELT 267
C Q + RP +++ +L ++ + E++
Sbjct: 266 RMCWQFNPNMRPTFLEIVNLLKDDLHPSFPEVS 298
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Query: 27 ITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRS 86
I EI L + HPN+V+L+ + LV+E++ + L + + + I L K
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK-- 106
Query: 87 DICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR 146
+ +GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + T
Sbjct: 107 SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 163
Query: 147 IAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 184
+ T Y APE +LG + A D++S G + E+++ R
Sbjct: 164 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Query: 27 ITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRS 86
I EI L + HPN+V+L+ + LV+E++ + L + + + I L K
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK-- 105
Query: 87 DICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR 146
+ +GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + T
Sbjct: 106 SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 162
Query: 147 IAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 184
+ T Y APE +LG + A D++S G + E+++ R
Sbjct: 163 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 99/197 (50%), Gaps = 10/197 (5%)
Query: 6 NGRRIAVKPL--SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
+GR+ +K + S S + E E+ L+N++HPN+V+ + +V +Y E
Sbjct: 48 DGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEG 107
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
L + + + + ++ D V I L +H+ I+HRDIK+ NI L ++
Sbjct: 108 GDLFKRI--NAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDG 162
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
++GDFG+A++ ++ + GT YL+PE K+D+++ G ++ E+ +
Sbjct: 163 TVQLGDFGIARVL-NSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTL 221
Query: 184 RNSGKAMWGQMNKFLLE 200
+++ +A G M +L+
Sbjct: 222 KHAFEA--GSMKNLVLK 236
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 111/260 (42%), Gaps = 32/260 (12%)
Query: 17 AESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKA 76
A S + +E + E +++V +P++ L+G C+ T +++ LD V K
Sbjct: 89 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKD 146
Query: 77 NIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGL 132
NI LNW CV IAKG+ +L + +VHRD+ A N+L+ + KI DFGL
Sbjct: 147 NIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGL 197
Query: 133 AKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAM 190
AKL ++A E +L T ++DV+S+GV V E+++ G +
Sbjct: 198 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 257
Query: 191 WGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQ 250
+LE +L Q PP I + C A RP+ +
Sbjct: 258 PASEISSILEKGERLPQ---------------PPICTIDVYMIMVKCWMIDADSRPKFRE 302
Query: 251 VIKMLTKNIRLNEEELTAPG 270
+I +K R + L G
Sbjct: 303 LIIEFSKMARDPQRYLVIQG 322
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 117/265 (44%), Gaps = 37/265 (13%)
Query: 9 RIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
R+AVK ++ + R EF+ E + ++V L+G +G ++V E + + L
Sbjct: 49 RVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL- 107
Query: 68 RVLLGATKANIKLN-------WEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ L + + + N ++ + IA G+A+L+ + VHRD+ A N ++
Sbjct: 108 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVA 164
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGV 175
+F KIGDFG+ + +I G G ++APE + G T +D++SFGV
Sbjct: 165 HDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 220
Query: 176 LVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV-DPELGEYPPNEIIRYMKVA 234
++ EI S L E +Q E+ L+ V D + P N R +
Sbjct: 221 VLWEITS---------------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLM 265
Query: 235 FFCTQAAASRRPQMNQVIKMLTKNI 259
C Q RP +++ +L ++
Sbjct: 266 RMCWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 95/187 (50%), Gaps = 17/187 (9%)
Query: 10 IAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L +++ +RE F E M + ++HPN+V L+G + +++ Y + L
Sbjct: 42 VAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHE 101
Query: 69 VL-LGATKANIKLNWEKRS-----------DICVGIAKGLAFLHEELVPHIVHRDIKASN 116
L + + +++ + R+ + IA G+ +L H+VH+D+ N
Sbjct: 102 FLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRN 158
Query: 117 ILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGV 175
+L+ + N KI D GL + ++ + + ++APE ++ G+ ++ +D++S+GV
Sbjct: 159 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGV 218
Query: 176 LVLEIIS 182
++ E+ S
Sbjct: 219 VLWEVFS 225
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 117/265 (44%), Gaps = 37/265 (13%)
Query: 9 RIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
R+AVK ++ + R EF+ E + ++V L+G +G ++V E + + L
Sbjct: 46 RVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL- 104
Query: 68 RVLLGATKANIKLN-------WEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ L + + + N ++ + IA G+A+L+ + VHRD+ A N ++
Sbjct: 105 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVA 161
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGV 175
+F KIGDFG+ + +I G G ++APE + G T +D++SFGV
Sbjct: 162 HDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 217
Query: 176 LVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV-DPELGEYPPNEIIRYMKVA 234
++ EI S L E +Q E+ L+ V D + P N R +
Sbjct: 218 VLWEITS---------------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLM 262
Query: 235 FFCTQAAASRRPQMNQVIKMLTKNI 259
C Q RP +++ +L ++
Sbjct: 263 RMCWQFNPKMRPTFLEIVNLLKDDL 287
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 98/192 (51%), Gaps = 16/192 (8%)
Query: 1 MGTLTNGR---RIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI 55
GT+ G+ +AVK L + + + F E+ L RH N++ +G + I
Sbjct: 49 FGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAI 108
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 115
V ++ E +SL + L K + DI A+G+ +LH + +I+HRD+K++
Sbjct: 109 -VTQWCEGSSLYKHL---HVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSN 161
Query: 116 NILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTTGYLAPEYVL---GGQLTMKADVY 171
NI L + KIGDFGLA + + + + G+ ++APE + + ++DVY
Sbjct: 162 NIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVY 221
Query: 172 SFGVLVLEIISG 183
S+G+++ E+++G
Sbjct: 222 SYGIVLYELMTG 233
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 96/205 (46%), Gaps = 36/205 (17%)
Query: 7 GRRIAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGT----RRILVYEYV 61
G ++AVK + E RE TEI +RH N++ I ++GT + L+ +Y
Sbjct: 60 GEKVAVKVFFTTEEASWFRE--TEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYH 117
Query: 62 ENNSLDRVLLGAT---KANIKLNWEKRSDICVGIAKGLAFLHEELV-----PHIVHRDIK 113
EN SL L T K+ +KL + S GL LH E+ P I HRD+K
Sbjct: 118 ENGSLYDYLKSTTLDAKSMLKLAYSSVS--------GLCHLHTEIFSTQGKPAIAHRDLK 169
Query: 114 ASNILLDQEFNPKIGDFGLAKLFPDNITHI----TTRIAGTTGYLAPEYVLGGQLT---- 165
+ NIL+ + I D GLA F + + TR+ GT Y+ PE VL L
Sbjct: 170 SKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYMPPE-VLDESLNRNHF 227
Query: 166 ---MKADVYSFGVLVLEIISGRNSG 187
+ AD+YSFG+++ E+ SG
Sbjct: 228 QSYIMADMYSFGLILWEVARRCVSG 252
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 9/155 (5%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
EI LS + + G ++G++ ++ EY+ S +L ++ + +
Sbjct: 71 EITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQI-----ATM 125
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
I KGL +LH E +HRDIKA+N+LL ++ + K+ DFG+A D T +
Sbjct: 126 LKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV- 181
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
GT ++APE + KAD++S G+ +E+ G
Sbjct: 182 GTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKG 216
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 116/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T +++ LD
Sbjct: 44 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDY 103
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IA+G+ +L + +VHRD+ A N+L+ +
Sbjct: 104 V--REHKDNIGSQYLLNW------CVQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQH 152
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFGLAKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 153 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 212
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 213 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMVKCWMIDA 257
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 258 DSRPKFRELIIEFSKMARDPQRYLVIQG 285
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E+V
Sbjct: 26 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQ 85
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 86 D-LKTFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 139
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + T + T Y APE +LG + A D++S G + E+++
Sbjct: 140 AIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
Query: 183 GR 184
R
Sbjct: 199 RR 200
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 27/196 (13%)
Query: 10 IAVKPLSAE-SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+AVK L S +R+ ++E L V HP++++L G C Q +L+ EY + SL
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 69 VLLGATKAN------------IKLNWEKRSDICVG--------IAKGLAFLHEELVPHIV 108
L + K L+ + +G I++G+ +L E +V
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLV 172
Query: 109 HRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLAPEYVLGGQLTM 166
HRD+ A NIL+ + KI DFGL++ + +++ R G ++A E + T
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV-KRSQGRIPVKWMAIESLFDHIYTT 231
Query: 167 KADVYSFGVLVLEIIS 182
++DV+SFGVL+ EI++
Sbjct: 232 QSDVWSFGVLLWEIVT 247
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 93/182 (51%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E+V+
Sbjct: 30 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ 89
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 90 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 143
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + + T Y APE +LG + A D++S G + E+++
Sbjct: 144 AIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
Query: 183 GR 184
R
Sbjct: 203 RR 204
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 26 FITEIMTLSNVRHPNLVELIGCCVQGTRRIL--VYEYVENNSLDRVLLGATKANIKLNWE 83
++E+ L ++HPN+V + T L V EY E L V+ TK L+ E
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 84 KRSDICVGIAKGLAFLHE--ELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT 141
+ + L H + ++HRD+K +N+ LD + N K+GDFGLA++ ++
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDE 170
Query: 142 HITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
GT Y++PE + K+D++S G L+ E+ +
Sbjct: 171 DFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 24/173 (13%)
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 147
I + K L L E L I+HRDIK SNILLD+ N K+ DFG++ D+I TR
Sbjct: 130 ITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK--TRD 185
Query: 148 AGTTGYLAPEYVLGGQ----LTMKADVYSFGVLVLEIISGR---NSGKAMWGQMNKFLLE 200
AG Y+APE + +++DV+S G+ + E+ +GR +++ Q+ + +
Sbjct: 186 AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV-- 243
Query: 201 WAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIK 253
+ P +L + E E+ P+ ++ C S+RP+ +++K
Sbjct: 244 -------KGDPPQLSNSEEREFSPS----FINFVNLCLTKDESKRPKYKELLK 285
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 107/252 (42%), Gaps = 32/252 (12%)
Query: 19 SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSL----------- 66
SK R+F E+ L + HPN++ L+G C L EY + +L
Sbjct: 65 SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLE 124
Query: 67 -DRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 125
D A L+ ++ +A+G+ +L ++ +HRD+ A NIL+ + +
Sbjct: 125 TDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 181
Query: 126 KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRN 185
KI DFGL++ + R+ ++A E + T +DV+S+GVL+ EI+S
Sbjct: 182 KIADFGLSRGQEVYVKKTMGRLP--VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS--L 237
Query: 186 SGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRR 245
G G L E Q ++ EKPL D E+ M+ C + R
Sbjct: 238 GGTPYCGMTCAELYEKLPQGYRLEKPLNCDD---------EVYDLMRQ---CWREKPYER 285
Query: 246 PQMNQVIKMLTK 257
P Q++ L +
Sbjct: 286 PSFAQILVSLNR 297
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 91/187 (48%), Gaps = 20/187 (10%)
Query: 5 TNGRRIAVK-----PLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYE 59
T G+++A+K L+ QG E EI L +RHP++++L I+V E
Sbjct: 27 TTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIE 84
Query: 60 YVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILL 119
Y N D ++ K++ ++ I + + H IVHRD+K N+LL
Sbjct: 85 YAGNELFDYIV-----QRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLL 136
Query: 120 DQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM--KADVYSFGVLV 177
D+ N KI DFGL+ + D T+ G+ Y APE V+ G+L + DV+S GV++
Sbjct: 137 DEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VISGKLYAGPEVDVWSCGVIL 193
Query: 178 LEIISGR 184
++ R
Sbjct: 194 YVMLCRR 200
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 107/252 (42%), Gaps = 32/252 (12%)
Query: 19 SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSL----------- 66
SK R+F E+ L + HPN++ L+G C L EY + +L
Sbjct: 55 SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLE 114
Query: 67 -DRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 125
D A L+ ++ +A+G+ +L ++ +HRD+ A NIL+ + +
Sbjct: 115 TDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 171
Query: 126 KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRN 185
KI DFGL++ + R+ ++A E + T +DV+S+GVL+ EI+S
Sbjct: 172 KIADFGLSRGQEVYVKKTMGRLP--VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS--L 227
Query: 186 SGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRR 245
G G L E Q ++ EKPL D E+ M+ C + R
Sbjct: 228 GGTPYCGMTCAELYEKLPQGYRLEKPLNCDD---------EVYDLMRQ---CWREKPYER 275
Query: 246 PQMNQVIKMLTK 257
P Q++ L +
Sbjct: 276 PSFAQILVSLNR 287
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 93/182 (51%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GL+F H ++HRD+K N+L++ E
Sbjct: 87 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLSFCHSH---RVLHRDLKPQNLLINTEG 140
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + T + T Y APE +LG + A D++S G + E+++
Sbjct: 141 AIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 183 GR 184
R
Sbjct: 200 RR 201
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 79/184 (42%), Gaps = 13/184 (7%)
Query: 5 TNGRRIAVKPLSAE---SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYV 61
GR A+K L E +K V +TE L N RHP L L R V EY
Sbjct: 31 ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYA 90
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
L ++ + E+ I L +LH +V+RDIK N++LD+
Sbjct: 91 NGGEL---FFHLSRERV-FTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDK 143
Query: 122 EFNPKIGDFGLAKL-FPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ + KI DFGL K D T T GT YLAPE + D + GV++ E+
Sbjct: 144 DGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 201
Query: 181 ISGR 184
+ GR
Sbjct: 202 MCGR 205
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 25 EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEK 84
E EI L ++ HPN+++L LV E+ E L ++ K +
Sbjct: 92 EIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK----FDECD 147
Query: 85 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQE---FNPKIGDFGLAKLFPDNIT 141
++I I G+ +LH+ +IVHRDIK NILL+ + N KI DFGL+ F +
Sbjct: 148 AANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK 204
Query: 142 HITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
+ R+ GT Y+APE VL + K DV+S GV++ ++ G
Sbjct: 205 -LRDRL-GTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 91/187 (48%), Gaps = 20/187 (10%)
Query: 5 TNGRRIAVK-----PLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYE 59
T G+++A+K L+ QG E EI L +RHP++++L I+V E
Sbjct: 37 TTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIE 94
Query: 60 YVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILL 119
Y N D ++ K++ ++ I + + H IVHRD+K N+LL
Sbjct: 95 YAGNELFDYIV-----QRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLL 146
Query: 120 DQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM--KADVYSFGVLV 177
D+ N KI DFGL+ + D T+ G+ Y APE V+ G+L + DV+S GV++
Sbjct: 147 DEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VISGKLYAGPEVDVWSCGVIL 203
Query: 178 LEIISGR 184
++ R
Sbjct: 204 YVMLCRR 210
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 79/183 (43%), Gaps = 13/183 (7%)
Query: 6 NGRRIAVKPLSAE---SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVE 62
GR A+K L E +K V +TE L N RHP L L R V EY
Sbjct: 29 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 88
Query: 63 NNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQE 122
L ++ + E+ I L +LH +V+RDIK N++LD++
Sbjct: 89 GGEL---FFHLSRERV-FTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKD 141
Query: 123 FNPKIGDFGLAKL-FPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 181
+ KI DFGL K D T T GT YLAPE + D + GV++ E++
Sbjct: 142 GHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 182 SGR 184
GR
Sbjct: 200 CGR 202
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 116/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T ++++ LD
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDY 108
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 109 VR--EHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 157
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFG AKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 158 VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 218 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMVKCWMIDA 262
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 263 DSRPKFRELIIEFSKMARDPQRYLVIQG 290
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 121/273 (44%), Gaps = 37/273 (13%)
Query: 9 RIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
R+AVK ++ + R EF+ E + ++V L+G +G ++V E + + L
Sbjct: 49 RVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL- 107
Query: 68 RVLLGATKANIKLN-------WEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ L + + + N ++ + IA G+A+L+ + VHRD+ A N ++
Sbjct: 108 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVA 164
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGV 175
+F KIGDFG+ + +I G G ++APE + G T +D++SFGV
Sbjct: 165 HDFTVKIGDFGMTR----DIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 220
Query: 176 LVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV-DPELGEYPPNEIIRYMKVA 234
++ EI S L E +Q E+ L+ V D + P N R +
Sbjct: 221 VLWEITS---------------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLM 265
Query: 235 FFCTQAAASRRPQMNQVIKMLTKNIRLNEEELT 267
C Q RP +++ +L ++ + E++
Sbjct: 266 RMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVS 298
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 80/185 (43%), Gaps = 15/185 (8%)
Query: 5 TNGRRIAVKPLSAE---SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYV 61
GR A+K L E +K V +TE L N RHP L L R V EY
Sbjct: 33 ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYA 92
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
L ++ + E+ I L +LH +V+RDIK N++LD+
Sbjct: 93 NGGEL---FFHLSRERV-FTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDK 145
Query: 122 EFNPKIGDFGLAKLFPDNITHITT--RIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLE 179
+ + KI DFGL K + I+ T GT YLAPE + D + GV++ E
Sbjct: 146 DGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 202
Query: 180 IISGR 184
++ GR
Sbjct: 203 MMCGR 207
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 79/184 (42%), Gaps = 13/184 (7%)
Query: 5 TNGRRIAVKPLSAE---SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYV 61
GR A+K L E +K V +TE L N RHP L L R V EY
Sbjct: 28 ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYA 87
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
L ++ + E+ I L +LH +V+RDIK N++LD+
Sbjct: 88 NGGEL---FFHLSRERV-FTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDK 140
Query: 122 EFNPKIGDFGLAKL-FPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ + KI DFGL K D T T GT YLAPE + D + GV++ E+
Sbjct: 141 DGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 198
Query: 181 ISGR 184
+ GR
Sbjct: 199 MCGR 202
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 91/187 (48%), Gaps = 20/187 (10%)
Query: 5 TNGRRIAVK-----PLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYE 59
T G+++A+K L+ QG E EI L +RHP++++L I+V E
Sbjct: 31 TTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIE 88
Query: 60 YVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILL 119
Y N D ++ K++ ++ I + + H IVHRD+K N+LL
Sbjct: 89 YAGNELFDYIV-----QRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLL 140
Query: 120 DQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM--KADVYSFGVLV 177
D+ N KI DFGL+ + D T+ G+ Y APE V+ G+L + DV+S GV++
Sbjct: 141 DEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VISGKLYAGPEVDVWSCGVIL 197
Query: 178 LEIISGR 184
++ R
Sbjct: 198 YVMLCRR 204
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 116/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T ++++ LD
Sbjct: 51 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDY 110
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 111 V--REHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 159
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFG AKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 160 VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 219
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 220 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMVKCWMIDA 264
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 265 DSRPKFRELIIEFSKMARDPQRYLVIQG 292
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 82/182 (45%), Gaps = 12/182 (6%)
Query: 7 GRRIAVKPLSAE---SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
GR A+K L E +K V +TE L N RHP L L R V EY
Sbjct: 176 GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 235
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
L ++ + + ++ I L +LH E ++V+RD+K N++LD++
Sbjct: 236 GEL---FFHLSRERV-FSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDG 289
Query: 124 NPKIGDFGLAKL-FPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
+ KI DFGL K D T T GT YLAPE + D + GV++ E++
Sbjct: 290 HIKITDFGLCKEGIKDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 347
Query: 183 GR 184
GR
Sbjct: 348 GR 349
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 91/187 (48%), Gaps = 20/187 (10%)
Query: 5 TNGRRIAVK-----PLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYE 59
T G+++A+K L+ QG E EI L +RHP++++L I+V E
Sbjct: 36 TTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIE 93
Query: 60 YVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILL 119
Y N D ++ K++ ++ I + + H IVHRD+K N+LL
Sbjct: 94 YAGNELFDYIV-----QRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLL 145
Query: 120 DQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM--KADVYSFGVLV 177
D+ N KI DFGL+ + D T+ G+ Y APE V+ G+L + DV+S GV++
Sbjct: 146 DEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VISGKLYAGPEVDVWSCGVIL 202
Query: 178 LEIISGR 184
++ R
Sbjct: 203 YVMLCRR 209
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 115/268 (42%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T +++ LD
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDY 106
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 107 V--REHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 155
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFG AKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 156 VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 216 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMVKCWMIDA 260
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 261 DSRPKFRELIIEFSKMARDPQRYLVIQG 288
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 33/199 (16%)
Query: 10 IAVKPLSAE-SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+AVK L S +R+ ++E L V HP++++L G C Q +L+ EY + SL
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 69 VLLGATKAN------------IKLNWEKRSDICVG--------IAKGLAFLHEELVPHIV 108
L + K L+ + +G I++G+ +L E +V
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLV 172
Query: 109 HRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQ 163
HRD+ A NIL+ + KI DFGL++ ++ + + + G ++A E +
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSR----DVYEEDSXVKRSQGRIPVKWMAIESLFDHI 228
Query: 164 LTMKADVYSFGVLVLEIIS 182
T ++DV+SFGVL+ EI++
Sbjct: 229 YTTQSDVWSFGVLLWEIVT 247
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 33/199 (16%)
Query: 10 IAVKPLSAE-SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+AVK L S +R+ ++E L V HP++++L G C Q +L+ EY + SL
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 69 VLLGATKAN------------IKLNWEKRSDICVG--------IAKGLAFLHEELVPHIV 108
L + K L+ + +G I++G+ +L E +V
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---SLV 172
Query: 109 HRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQ 163
HRD+ A NIL+ + KI DFGL++ ++ + + + G ++A E +
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSR----DVYEEDSXVKRSQGRIPVKWMAIESLFDHI 228
Query: 164 LTMKADVYSFGVLVLEIIS 182
T ++DV+SFGVL+ EI++
Sbjct: 229 YTTQSDVWSFGVLLWEIVT 247
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 80/185 (43%), Gaps = 15/185 (8%)
Query: 5 TNGRRIAVKPLSAE---SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYV 61
GR A+K L E +K V +TE L N RHP L L R V EY
Sbjct: 28 ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYA 87
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
L ++ + E+ I L +LH +V+RDIK N++LD+
Sbjct: 88 NGGEL---FFHLSRERV-FTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDK 140
Query: 122 EFNPKIGDFGLAKLFPDNITHITT--RIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLE 179
+ + KI DFGL K + I+ T GT YLAPE + D + GV++ E
Sbjct: 141 DGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 197
Query: 180 IISGR 184
++ GR
Sbjct: 198 MMCGR 202
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 82/184 (44%), Gaps = 12/184 (6%)
Query: 5 TNGRRIAVKPLSAE---SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYV 61
GR A+K L E +K V +TE L N RHP L L R V EY
Sbjct: 171 ATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYA 230
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
L ++ + + ++ I L +LH E ++V+RD+K N++LD+
Sbjct: 231 NGGEL---FFHLSRERV-FSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDK 284
Query: 122 EFNPKIGDFGLAKL-FPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ + KI DFGL K D T T GT YLAPE + D + GV++ E+
Sbjct: 285 DGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 342
Query: 181 ISGR 184
+ GR
Sbjct: 343 MCGR 346
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 117/265 (44%), Gaps = 37/265 (13%)
Query: 9 RIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
R+AVK ++ + R EF+ E + ++V L+G +G ++V E + + L
Sbjct: 48 RVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL- 106
Query: 68 RVLLGATKANIKLN-------WEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ L + + + N ++ + IA G+A+L+ + VHRD+ A N ++
Sbjct: 107 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVA 163
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGV 175
+F KIGDFG+ + +I G G ++APE + G T +D++SFGV
Sbjct: 164 HDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 219
Query: 176 LVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV-DPELGEYPPNEIIRYMKVA 234
++ EI S L E +Q E+ L+ V D + P N R +
Sbjct: 220 VLWEITS---------------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLM 264
Query: 235 FFCTQAAASRRPQMNQVIKMLTKNI 259
C Q RP +++ +L ++
Sbjct: 265 RMCWQFNPKMRPTFLEIVNLLKDDL 289
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 121/273 (44%), Gaps = 37/273 (13%)
Query: 9 RIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
R+AVK ++ + R EF+ E + ++V L+G +G ++V E + + L
Sbjct: 49 RVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL- 107
Query: 68 RVLLGATKANIKLN-------WEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ L + + + N ++ + IA G+A+L+ + VHRD+ A N ++
Sbjct: 108 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVA 164
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGV 175
+F KIGDFG+ + +I G G ++APE + G T +D++SFGV
Sbjct: 165 HDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 220
Query: 176 LVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV-DPELGEYPPNEIIRYMKVA 234
++ EI S L E +Q E+ L+ V D + P N R +
Sbjct: 221 VLWEITS---------------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLM 265
Query: 235 FFCTQAAASRRPQMNQVIKMLTKNIRLNEEELT 267
C Q RP +++ +L ++ + E++
Sbjct: 266 RMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVS 298
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 12/180 (6%)
Query: 7 GRRIAVKPLSAE--SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
GR +AVK + + +++ E+ + + HPN+V+L LV EY
Sbjct: 40 GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGG 99
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+ L+ + K E R+ I + + H++ +IVHRD+KA N+LLD + N
Sbjct: 100 EVFDYLVAHGRMKEK---EARAKF-RQIVSAVQYCHQK---YIVHRDLKAENLLLDGDMN 152
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM-KADVYSFGVLVLEIISG 183
KI DFG + F + + G+ Y APE G + + DV+S GV++ ++SG
Sbjct: 153 IKIADFGFSNEF--TVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 84/182 (46%), Gaps = 10/182 (5%)
Query: 5 TNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRR--ILVYEYVE 62
G +AVK L R+F EI L + +V+ G R LV EY+
Sbjct: 34 NTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLP 93
Query: 63 NNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQE 122
+ L L + +L+ + I KG+ +L VHRD+ A NIL++ E
Sbjct: 94 SGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESE 147
Query: 123 FNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ KI DFGLAKL P + R G + + APE + + ++DV+SFGV++ E+
Sbjct: 148 AHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 207
Query: 181 IS 182
+
Sbjct: 208 FT 209
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 30/209 (14%)
Query: 7 GRRIAVKPLSAESKQ------GVREFITEIMTLSNVRHPNLVELIGCCV-----QGTRRI 55
GR +A+K + ++ + +RE + + L HPN+V L C + T+
Sbjct: 37 GRFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95
Query: 56 LVYEYVENN---SLDRVLL-GATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRD 111
LV+E+V+ + LD+V G IK D+ + +GL FLH +VHRD
Sbjct: 96 LVFEHVDQDLTTYLDKVPEPGVPTETIK-------DMMFQLLRGLDFLHSH---RVVHRD 145
Query: 112 IKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVY 171
+K NIL+ K+ DFGLA+++ + T + T Y APE +L D++
Sbjct: 146 LKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLW 203
Query: 172 SFGVLVLEIISGRN--SGKAMWGQMNKFL 198
S G + E+ + G + Q+ K L
Sbjct: 204 SVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 115/268 (42%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T +++ LD
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDY 113
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 114 VR--EHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 162
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFG AKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 163 VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 222
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 223 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMVKCWMIDA 267
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 268 DSRPKFRELIIEFSKMARDPQRYLVIQG 295
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 13/177 (7%)
Query: 10 IAVKPLSAE-SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L S + +E + E ++ V P + L+G C+ T +++ LD
Sbjct: 49 VAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDH 108
Query: 69 VL--LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK 126
V G + LNW C+ IAKG+++L + +VHRD+ A N+L+ + K
Sbjct: 109 VRENRGRLGSQDLLNW------CMQIAKGMSYLEDV---RLVHRDLAARNVLVKSPNHVK 159
Query: 127 IGDFGLAKLFP-DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
I DFGLA+L D + ++A E +L + T ++DV+S+GV V E+++
Sbjct: 160 ITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 80/185 (43%), Gaps = 15/185 (8%)
Query: 5 TNGRRIAVKPLSAE---SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYV 61
GR A+K L E +K V +TE L N RHP L L R V EY
Sbjct: 28 ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYA 87
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
L ++ + E+ I L +LH +V+RDIK N++LD+
Sbjct: 88 NGGEL---FFHLSRERV-FTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDK 140
Query: 122 EFNPKIGDFGLAKLFPDNITHITT--RIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLE 179
+ + KI DFGL K + I+ T GT YLAPE + D + GV++ E
Sbjct: 141 DGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 197
Query: 180 IISGR 184
++ GR
Sbjct: 198 MMCGR 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 80/185 (43%), Gaps = 15/185 (8%)
Query: 5 TNGRRIAVKPLSAE---SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYV 61
GR A+K L E +K V +TE L N RHP L L R V EY
Sbjct: 28 ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYA 87
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
L ++ + E+ I L +LH +V+RDIK N++LD+
Sbjct: 88 NGGEL---FFHLSRERV-FTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDK 140
Query: 122 EFNPKIGDFGLAKLFPDNITHITT--RIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLE 179
+ + KI DFGL K + I+ T GT YLAPE + D + GV++ E
Sbjct: 141 DGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 197
Query: 180 IISGR 184
++ GR
Sbjct: 198 MMCGR 202
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 30/210 (14%)
Query: 6 NGRRIAVKPLSAESKQ------GVREFITEIMTLSNVRHPNLVELIGCCV-----QGTRR 54
GR +A+K + ++ + +RE + + L HPN+V L C + T+
Sbjct: 36 GGRFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL 94
Query: 55 ILVYEYVENN---SLDRVLL-GATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHR 110
LV+E+V+ + LD+V G IK D+ + +GL FLH +VHR
Sbjct: 95 TLVFEHVDQDLTTYLDKVPEPGVPTETIK-------DMMFQLLRGLDFLHSH---RVVHR 144
Query: 111 DIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADV 170
D+K NIL+ K+ DFGLA+++ + T + T Y APE +L D+
Sbjct: 145 DLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLWYRAPEVLLQSSYATPVDL 202
Query: 171 YSFGVLVLEIISGRN--SGKAMWGQMNKFL 198
+S G + E+ + G + Q+ K L
Sbjct: 203 WSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 26 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 86 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 139
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + + T Y APE +LG + A D++S G + E+++
Sbjct: 140 AIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
Query: 183 GR 184
R
Sbjct: 199 RR 200
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 26 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 86 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 139
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + + T Y APE +LG + A D++S G + E+++
Sbjct: 140 AIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
Query: 183 GR 184
R
Sbjct: 199 RR 200
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 30/210 (14%)
Query: 6 NGRRIAVKPLSAESKQ------GVREFITEIMTLSNVRHPNLVELIGCCV-----QGTRR 54
GR +A+K + ++ + +RE + + L HPN+V L C + T+
Sbjct: 36 GGRFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL 94
Query: 55 ILVYEYVENN---SLDRVLL-GATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHR 110
LV+E+V+ + LD+V G IK D+ + +GL FLH +VHR
Sbjct: 95 TLVFEHVDQDLTTYLDKVPEPGVPTETIK-------DMMFQLLRGLDFLHSH---RVVHR 144
Query: 111 DIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADV 170
D+K NIL+ K+ DFGLA+++ + T + T Y APE +L D+
Sbjct: 145 DLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLWYRAPEVLLQSSYATPVDL 202
Query: 171 YSFGVLVLEIISGRN--SGKAMWGQMNKFL 198
+S G + E+ + G + Q+ K L
Sbjct: 203 WSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Query: 4 LTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
L+N RIA+K + + + EI +++H N+V+ +G + + E V
Sbjct: 44 LSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG 103
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
SL LL + +K N + I +GL +LH+ IVHRDIK N+L++
Sbjct: 104 GSL-SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYS 159
Query: 124 NP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQ--LTMKADVYSFGVLVLEI 180
KI DFG +K I T GT Y+APE + G AD++S G ++E+
Sbjct: 160 GVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEM 218
Query: 181 ISGR 184
+G+
Sbjct: 219 ATGK 222
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 87 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 140
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + + T Y APE +LG + A D++S G + E+++
Sbjct: 141 AIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 183 GR 184
R
Sbjct: 200 RR 201
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 97/194 (50%), Gaps = 26/194 (13%)
Query: 8 RRIAVKPLSAESKQGV-REFITEIMTLSNV-RHPNLVELIGCCVQ-GTRRILVYEYVENN 64
R +AVK L + R ++E+ L ++ H N+V L+G C + G +++ E+ +
Sbjct: 59 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 118
Query: 65 SLDRVLLGATKANIKLNWEKRSD-----------ICVG--IAKGLAFLHEELVPHIVHRD 111
+L L +K N + ++ D IC +AKG+ FL +HRD
Sbjct: 119 NLSTYL--RSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173
Query: 112 IKASNILLDQEFNPKIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYVLGGQLTMKA 168
+ A NILL ++ KI DFGLA+ PD + R+ ++APE + T+++
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP--LKWMAPETIFDRVYTIQS 231
Query: 169 DVYSFGVLVLEIIS 182
DV+SFGVL+ EI S
Sbjct: 232 DVWSFGVLLWEIFS 245
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 31 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 90
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 91 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 144
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + + T Y APE +LG + A D++S G + E+++
Sbjct: 145 AIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
Query: 183 GR 184
R
Sbjct: 204 RR 205
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 87 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 140
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + + T Y APE +LG + A D++S G + E+++
Sbjct: 141 AIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 183 GR 184
R
Sbjct: 200 RR 201
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Query: 4 LTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
L+N RIA+K + + + EI +++H N+V+ +G + + E V
Sbjct: 30 LSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG 89
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
SL LL + +K N + I +GL +LH+ IVHRDIK N+L++
Sbjct: 90 GSL-SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYS 145
Query: 124 NP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQ--LTMKADVYSFGVLVLEI 180
KI DFG +K I T GT Y+APE + G AD++S G ++E+
Sbjct: 146 GVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEM 204
Query: 181 ISGR 184
+G+
Sbjct: 205 ATGK 208
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 116/268 (43%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T ++++ LD
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDY 108
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 109 VR--EHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 157
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFG AKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 158 VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 218 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMRKCWMIDA 262
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 263 DSRPKFRELIIEFSKMARDPQRYLVIQG 290
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 30 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 89
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 90 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 143
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + + T Y APE +LG + A D++S G + E+++
Sbjct: 144 AIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
Query: 183 GR 184
R
Sbjct: 203 RR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 29 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 88
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 89 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 142
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + + T Y APE +LG + A D++S G + E+++
Sbjct: 143 AIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
Query: 183 GR 184
R
Sbjct: 202 RR 203
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 30 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 89
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 90 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 143
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + + T Y APE +LG + A D++S G + E+++
Sbjct: 144 AIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
Query: 183 GR 184
R
Sbjct: 203 RR 204
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 87 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 140
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + + T Y APE +LG + A D++S G + E+++
Sbjct: 141 AIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 183 GR 184
R
Sbjct: 200 RR 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 28 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 87
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 88 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 141
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + + T Y APE +LG + A D++S G + E+++
Sbjct: 142 AIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
Query: 183 GR 184
R
Sbjct: 201 RR 202
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 28 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 87
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 88 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 141
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + + T Y APE +LG + A D++S G + E+++
Sbjct: 142 AIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
Query: 183 GR 184
R
Sbjct: 201 RR 202
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 29 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 88
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 89 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 142
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + + T Y APE +LG + A D++S G + E+++
Sbjct: 143 AIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
Query: 183 GR 184
R
Sbjct: 202 RR 203
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 87 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 140
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + + T Y APE +LG + A D++S G + E+++
Sbjct: 141 AIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 183 GR 184
R
Sbjct: 200 RR 201
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 25/196 (12%)
Query: 9 RIAVKPLSAESKQGVRE-FITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSL 66
++AVK L ++ RE ++E+ ++ + H N+V L+G C L++EY L
Sbjct: 77 QVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDL 136
Query: 67 DRVLLGA----TKANIKLNWEKRSD-------------ICVG--IAKGLAFLHEELVPHI 107
L ++ I+ +KR + +C +AKG+ FL
Sbjct: 137 LNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSC 193
Query: 108 VHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTM 166
VHRD+ A N+L+ KI DFGLA+ + ++ A ++APE + G T+
Sbjct: 194 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTI 253
Query: 167 KADVYSFGVLVLEIIS 182
K+DV+S+G+L+ EI S
Sbjct: 254 KSDVWSYGILLWEIFS 269
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 28 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 87
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 88 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEG 141
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + + T Y APE +LG + A D++S G + E+++
Sbjct: 142 AIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
Query: 183 GR 184
R
Sbjct: 201 RR 202
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 29 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 88
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 89 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEG 142
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + + T Y APE +LG + A D++S G + E+++
Sbjct: 143 AIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
Query: 183 GR 184
R
Sbjct: 202 RR 203
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 15/183 (8%)
Query: 6 NGRRIAVKPLSAE---SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVE 62
G ++AVK L+ + S V + EI L RHP++++L T +V EYV
Sbjct: 35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94
Query: 63 NNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQE 122
L + + E R + I + + H +V VHRD+K N+LLD
Sbjct: 95 GGELFDYICKHGRVE---EMEARR-LFQQILSAVDYCHRHMV---VHRDLKPENVLLDAH 147
Query: 123 FNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM--KADVYSFGVLVLEI 180
N KI DFGL+ + D T+ G+ Y APE V+ G+L + D++S GV++ +
Sbjct: 148 MNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAPE-VISGRLYAGPEVDIWSCGVILYAL 204
Query: 181 ISG 183
+ G
Sbjct: 205 LCG 207
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 93/184 (50%), Gaps = 19/184 (10%)
Query: 7 GRRIAVKP-LSAESKQGVREF-ITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN- 63
G+ +A+K L +E +++ + EI L ++HPNLV L+ + R LV+EY ++
Sbjct: 28 GQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHT 87
Query: 64 --NSLDRVLLGATKANIK-LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ LDR G + +K + W+ + + F H+ + +HRD+K NIL+
Sbjct: 88 VLHELDRYQRGVPEHLVKSITWQ--------TLQAVNFCHKH---NCIHRDVKPENILIT 136
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLE 179
+ K+ DFG A+L + +A T Y +PE ++G Q DV++ G + E
Sbjct: 137 KHSVIKLCDFGFARLLTGPSDYYDDEVA-TRWYRSPELLVGDTQYGPPVDVWAIGCVFAE 195
Query: 180 IISG 183
++SG
Sbjct: 196 LLSG 199
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 115/268 (42%), Gaps = 33/268 (12%)
Query: 10 IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K L A S + +E + E +++V +P++ L+G C+ T +++ LD
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDY 108
Query: 69 VLLGATKANIK----LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
V K NI LNW CV IAKG+ +L + +VHRD+ A N+L+ +
Sbjct: 109 VR--EHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 157
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS- 182
KI DFG AKL ++A E +L T ++DV+S+GV V E+++
Sbjct: 158 VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
Query: 183 GRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAA 242
G + +LE +L Q PP I + C A
Sbjct: 218 GSKPYDGIPASEISSILEKGERLPQ---------------PPICTIDVYMIMRKCWMIDA 262
Query: 243 SRRPQMNQVIKMLTKNIRLNEEELTAPG 270
RP+ ++I +K R + L G
Sbjct: 263 DSRPKFRELIIEFSKMARDPQRYLVIQG 290
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 92/177 (51%), Gaps = 12/177 (6%)
Query: 7 GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI-LVYEYVENNS 65
G ++AVK + ++ + F+ E ++ +RH NLV+L+G V+ + +V EY+ S
Sbjct: 44 GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 101
Query: 66 LDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 125
L L ++ L + + + + + +L + VHRD+ A N+L+ ++
Sbjct: 102 LVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVA 156
Query: 126 KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
K+ DFGL K + T T ++ + APE + + + K+DV+SFG+L+ EI S
Sbjct: 157 KVSDFGLTK--EASSTQDTGKL--PVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 91/177 (51%), Gaps = 12/177 (6%)
Query: 7 GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI-LVYEYVENNS 65
G ++AVK + ++ + F+ E ++ +RH NLV+L+G V+ + +V EY+ S
Sbjct: 35 GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 92
Query: 66 LDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 125
L L ++ L + + + + + +L + VHRD+ A N+L+ ++
Sbjct: 93 LVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVA 147
Query: 126 KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
K+ DFGL K + T T ++ + APE + + K+DV+SFG+L+ EI S
Sbjct: 148 KVSDFGLTK--EASSTQDTGKL--PVKWTAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 92/177 (51%), Gaps = 12/177 (6%)
Query: 7 GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI-LVYEYVENNS 65
G ++AVK + ++ + F+ E ++ +RH NLV+L+G V+ + +V EY+ S
Sbjct: 29 GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 86
Query: 66 LDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 125
L L ++ L + + + + + +L + VHRD+ A N+L+ ++
Sbjct: 87 LVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVA 141
Query: 126 KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
K+ DFGL K + T T ++ + APE + + + K+DV+SFG+L+ EI S
Sbjct: 142 KVSDFGLTK--EASSTQDTGKLP--VKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 7 GRRIAVKPLSAE--SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G+ +AVK + + +++ E+ + + HPN+V+L LV EY
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+ L+ + K E R+ I + + H++ IVHRD+KA N+LLD + N
Sbjct: 99 EVFDYLVAHGRMKEK---EARAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMN 151
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM-KADVYSFGVLVLEIISG 183
KI DFG + F + G+ Y APE G + + DV+S GV++ ++SG
Sbjct: 152 IKIADFGFSNEF--TFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 10 IAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K + VRE F+ E +T+ HP++V+LIG + I++ E L R
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGEL-R 98
Query: 69 VLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK 126
L K ++ L S I ++ LA+L + VHRDI A N+L+ K
Sbjct: 99 SFLQVRKYSLDLA----SLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVK 151
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 181
+GDFGL++ D+ + ++ ++APE + + T +DV+ FGV + EI+
Sbjct: 152 LGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 10 IAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K + VRE F+ E +T+ HP++V+LIG + I++ E L R
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGEL-R 98
Query: 69 VLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK 126
L K ++ L S I ++ LA+L + VHRDI A N+L+ K
Sbjct: 99 SFLQVRKYSLDLA----SLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVK 151
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 181
+GDFGL++ D+ + ++ ++APE + + T +DV+ FGV + EI+
Sbjct: 152 LGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 7 GRRIAVKPLSAE--SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G+ +AVK + + +++ E+ + + HPN+V+L LV EY
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+ L+ + K E R+ I + + H++ IVHRD+KA N+LLD + N
Sbjct: 99 EVFDYLVAHGRMKEK---EARAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMN 151
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM-KADVYSFGVLVLEIISG 183
KI DFG + F + G+ Y APE G + + DV+S GV++ ++SG
Sbjct: 152 IKIADFGFSNEF--TFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 7 GRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G A+K + E + +G+ I EI L ++H N+V+L R +LV+E+++ +
Sbjct: 26 GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQD 85
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+ LL + ++ K + + G+A+ H+ ++HRD+K N+L+++E
Sbjct: 86 L--KKLLDVCEGGLESVTAK--SFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGE 138
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 183
KI DFGLA+ F + T I T Y AP+ ++G + + D++S G + E+++G
Sbjct: 139 LKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 92/177 (51%), Gaps = 12/177 (6%)
Query: 7 GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI-LVYEYVENNS 65
G ++AVK + ++ + F+ E ++ +RH NLV+L+G V+ + +V EY+ S
Sbjct: 216 GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 273
Query: 66 LDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 125
L L ++ L + + + + + +L + VHRD+ A N+L+ ++
Sbjct: 274 LVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVA 328
Query: 126 KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
K+ DFGL K + T T ++ + APE + + + K+DV+SFG+L+ EI S
Sbjct: 329 KVSDFGLTK--EASSTQDTGKLP--VKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 10 IAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K + VRE F+ E +T+ HP++V+LIG + I++ E L R
Sbjct: 38 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGEL-R 95
Query: 69 VLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK 126
L K ++ L S I ++ LA+L + VHRDI A N+L+ K
Sbjct: 96 SFLQVRKYSLDLA----SLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVK 148
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 181
+GDFGL++ D+ + ++ ++APE + + T +DV+ FGV + EI+
Sbjct: 149 LGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 10 IAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K + VRE F+ E +T+ HP++V+LIG + I++ E L R
Sbjct: 43 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGEL-R 100
Query: 69 VLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK 126
L K ++ L S I ++ LA+L + VHRDI A N+L+ K
Sbjct: 101 SFLQVRKYSLDLA----SLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVK 153
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 181
+GDFGL++ D+ + ++ ++APE + + T +DV+ FGV + EI+
Sbjct: 154 LGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 6 NGRRIAVKPLSAE---SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVE 62
G ++AVK L+ + S V + EI L RHP++++L T +V EYV
Sbjct: 35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94
Query: 63 NNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQE 122
L + + E R + I + + H +V VHRD+K N+LLD
Sbjct: 95 GGELFDYICKHGRVE---EMEARR-LFQQILSAVDYCHRHMV---VHRDLKPENVLLDAH 147
Query: 123 FNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM--KADVYSFGVLVLEI 180
N KI DFGL+ + D G+ Y APE V+ G+L + D++S GV++ +
Sbjct: 148 MNAKIADFGLSNMMSDG--EFLRDSCGSPNYAAPE-VISGRLYAGPEVDIWSCGVILYAL 204
Query: 181 ISG 183
+ G
Sbjct: 205 LCG 207
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 9 RIAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
++AVK L S+Q +F+ E + +S + H N+V IG +Q R ++ E + L
Sbjct: 63 QVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 122
Query: 68 RVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
L + + D + IA G +L E H +HRDI A N LL
Sbjct: 123 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-G 178
Query: 125 P----KIGDFGLAKLFPDNITHITTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVL 176
P KIGDFG+A+ D R G ++ PE + G T K D +SFGVL
Sbjct: 179 PGRVAKIGDFGMAR---DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 235
Query: 177 VLEIIS 182
+ EI S
Sbjct: 236 LWEIFS 241
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 9 RIAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
++AVK L S+Q +F+ E + +S + H N+V IG +Q R ++ E + L
Sbjct: 77 QVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 136
Query: 68 RVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
L + + D + IA G +L E H +HRDI A N LL
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-G 192
Query: 125 P----KIGDFGLAKLFPDNITHITTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVL 176
P KIGDFG+A+ D R G ++ PE + G T K D +SFGVL
Sbjct: 193 PGRVAKIGDFGMAR---DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 249
Query: 177 VLEIIS 182
+ EI S
Sbjct: 250 LWEIFS 255
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 9 RIAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
++AVK L S+Q +F+ E + +S H N+V IG +Q R ++ E + L
Sbjct: 77 QVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 136
Query: 68 RVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
L + + D + IA G +L E H +HRDI A N LL
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-G 192
Query: 125 P----KIGDFGLAKLFPDNITHITTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVL 176
P KIGDFG+A+ D R G ++ PE + G T K D +SFGVL
Sbjct: 193 PGRVAKIGDFGMAR---DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 249
Query: 177 VLEIIS 182
+ EI S
Sbjct: 250 LWEIFS 255
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 10 IAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K + VRE F+ E +T+ HP++V+LIG + I++ E L R
Sbjct: 69 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGEL-R 126
Query: 69 VLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK 126
L K ++ L S I ++ LA+L + VHRDI A N+L+ K
Sbjct: 127 SFLQVRKYSLDLA----SLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVK 179
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 181
+GDFGL++ D+ + ++ ++APE + + T +DV+ FGV + EI+
Sbjct: 180 LGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 18/204 (8%)
Query: 5 TNGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
N R+A+K +S E + + + EI L RH N++ + R E +++
Sbjct: 66 VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII-----GINDIIRAPTIEQMKD 120
Query: 64 NSLDRVLLGATKANI-KLNWEKRSDICV---GIAKGLAFLHEELVPHIVHRDIKASNILL 119
L L+GA + K IC I +GL ++H +++HRD+K SN+LL
Sbjct: 121 VYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLL 177
Query: 120 DQEFNPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVL 176
+ + KI DFGLA++ PD + T T T Y APE +L + T D++S G +
Sbjct: 178 NTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI 237
Query: 177 VLEIISGRN--SGKAMWGQMNKFL 198
+ E++S R GK Q+N L
Sbjct: 238 LAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 28 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM 87
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 88 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEG 141
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + + T Y APE +LG + A D++S G + E+++
Sbjct: 142 AIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
Query: 183 GR 184
R
Sbjct: 201 RR 202
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 10 IAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K + VRE F+ E +T+ HP++V+LIG + I++ E L R
Sbjct: 46 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGEL-R 103
Query: 69 VLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK 126
L K ++ L S I ++ LA+L + VHRDI A N+L+ K
Sbjct: 104 SFLQVRKYSLDLA----SLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVK 156
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 181
+GDFGL++ D+ + ++ ++APE + + T +DV+ FGV + EI+
Sbjct: 157 LGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 10 IAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K + VRE F+ E +T+ HP++V+LIG + I++ E L R
Sbjct: 44 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGEL-R 101
Query: 69 VLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK 126
L K ++ L S I ++ LA+L + VHRDI A N+L+ K
Sbjct: 102 SFLQVRKYSLDLA----SLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVK 154
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 181
+GDFGL++ D+ + ++ ++APE + + T +DV+ FGV + EI+
Sbjct: 155 LGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 81/184 (44%), Gaps = 12/184 (6%)
Query: 5 TNGRRIAVKPLSAE---SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYV 61
GR A+K L E +K V +TE L N RHP L L R V EY
Sbjct: 31 ATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYA 90
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
L ++ + + ++ I L +LH E ++V+RD+K N++LD+
Sbjct: 91 NGGEL---FFHLSRERV-FSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDK 144
Query: 122 EFNPKIGDFGLAKL-FPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ + KI DFGL K D T GT YLAPE + D + GV++ E+
Sbjct: 145 DGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 202
Query: 181 ISGR 184
+ GR
Sbjct: 203 MCGR 206
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 30 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM 89
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 90 D-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEG 143
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + + T Y APE +LG + A D++S G + E+++
Sbjct: 144 AIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
Query: 183 GR 184
R
Sbjct: 203 RR 204
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 19/188 (10%)
Query: 9 RIAVKPLSAESKQ-GVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
++A+K ++ E Q + E + EI +S HPN+V V LV + + S+
Sbjct: 42 KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 101
Query: 68 RVLL-----GATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQE 122
++ G K+ + L+ + I + +GL +LH+ +HRD+KA NILL ++
Sbjct: 102 DIIKHIVAKGEHKSGV-LDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGED 157
Query: 123 FNPKIGDFGLAKLFPD--NITHITTR--IAGTTGYLAPEY---VLGGQLTMKADVYSFGV 175
+ +I DFG++ +IT R GT ++APE V G KAD++SFG+
Sbjct: 158 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG--YDFKADIWSFGI 215
Query: 176 LVLEIISG 183
+E+ +G
Sbjct: 216 TAIELATG 223
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 81/184 (44%), Gaps = 12/184 (6%)
Query: 5 TNGRRIAVKPLSAE---SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYV 61
GR A+K L E +K V +TE L N RHP L L R V EY
Sbjct: 32 ATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYA 91
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
L ++ + + ++ I L +LH E ++V+RD+K N++LD+
Sbjct: 92 NGGEL---FFHLSRERV-FSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDK 145
Query: 122 EFNPKIGDFGLAKL-FPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ + KI DFGL K D T GT YLAPE + D + GV++ E+
Sbjct: 146 DGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 203
Query: 181 ISGR 184
+ GR
Sbjct: 204 MCGR 207
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 9 RIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVE----LIGCCVQGTRRILVYEYVEN 63
R+A+K +S E + + + EI L RH N++ L ++ R + + + +
Sbjct: 70 RVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLME 129
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
L ++L +N + + I +GL ++H +++HRD+K SN+L++
Sbjct: 130 TDLYKLLKSQQLSNDHICY-----FLYQILRGLKYIHSA---NVLHRDLKPSNLLINTTC 181
Query: 124 NPKIGDFGLAKLFPDNITH--ITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEI 180
+ KI DFGLA++ H T T Y APE +L + T D++S G ++ E+
Sbjct: 182 DLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
Query: 181 ISGRN--SGKAMWGQMNKFL 198
+S R GK Q+N L
Sbjct: 242 LSNRPIFPGKHYLDQLNHIL 261
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 9 RIAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
++AVK L S+Q +F+ E + +S H N+V IG +Q R ++ E + L
Sbjct: 89 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 148
Query: 68 RVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
L + + D + IA G +L E H +HRDI A N LL
Sbjct: 149 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-G 204
Query: 125 P----KIGDFGLAKLFPDNITHITTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVL 176
P KIGDFG+A+ D R G ++ PE + G T K D +SFGVL
Sbjct: 205 PGRVAKIGDFGMAR---DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 261
Query: 177 VLEIIS 182
+ EI S
Sbjct: 262 LWEIFS 267
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 9 RIAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
++AVK L S+Q +F+ E + +S H N+V IG +Q R ++ E + L
Sbjct: 77 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLK 136
Query: 68 RVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
L + + D + IA G +L E H +HRDI A N LL
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-G 192
Query: 125 P----KIGDFGLAKLFPDNITHITTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVL 176
P KIGDFG+A+ D R G ++ PE + G T K D +SFGVL
Sbjct: 193 PGRVAKIGDFGMAR---DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 249
Query: 177 VLEIIS 182
+ EI S
Sbjct: 250 LWEIFS 255
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 107/252 (42%), Gaps = 32/252 (12%)
Query: 19 SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSL----------- 66
SK R+F E+ L + HPN++ L+G C L EY + +L
Sbjct: 62 SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLE 121
Query: 67 -DRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 125
D A L+ ++ +A+G+ +L ++ +HR++ A NIL+ + +
Sbjct: 122 TDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVA 178
Query: 126 KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRN 185
KI DFGL++ + R+ ++A E + T +DV+S+GVL+ EI+S
Sbjct: 179 KIADFGLSRGQEVYVKKTMGRLP--VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS--L 234
Query: 186 SGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRR 245
G G L E Q ++ EKPL D E+ M+ C + R
Sbjct: 235 GGTPYCGMTCAELYEKLPQGYRLEKPLNCDD---------EVYDLMRQ---CWREKPYER 282
Query: 246 PQMNQVIKMLTK 257
P Q++ L +
Sbjct: 283 PSFAQILVSLNR 294
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 9 RIAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
++AVK L S+Q +F+ E + +S H N+V IG +Q R ++ E + L
Sbjct: 62 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLK 121
Query: 68 RVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
L + + D + IA G +L E H +HRDI A N LL
Sbjct: 122 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-G 177
Query: 125 P----KIGDFGLAKLFPDNITHITTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVL 176
P KIGDFG+A+ D R G ++ PE + G T K D +SFGVL
Sbjct: 178 PGRVAKIGDFGMAR---DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 234
Query: 177 VLEIIS 182
+ EI S
Sbjct: 235 LWEIFS 240
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 19/188 (10%)
Query: 9 RIAVKPLSAESKQ-GVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
++A+K ++ E Q + E + EI +S HPN+V V LV + + S+
Sbjct: 37 KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 96
Query: 68 RVLL-----GATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQE 122
++ G K+ + L+ + I + +GL +LH+ +HRD+KA NILL ++
Sbjct: 97 DIIKHIVAKGEHKSGV-LDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGED 152
Query: 123 FNPKIGDFGLAKLFP--DNITHITTR--IAGTTGYLAPEY---VLGGQLTMKADVYSFGV 175
+ +I DFG++ +IT R GT ++APE V G KAD++SFG+
Sbjct: 153 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG--YDFKADIWSFGI 210
Query: 176 LVLEIISG 183
+E+ +G
Sbjct: 211 TAIELATG 218
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 122/273 (44%), Gaps = 37/273 (13%)
Query: 9 RIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
R+AVK ++ + R EF+ E + ++V L+G +G ++V E + + L
Sbjct: 49 RVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL- 107
Query: 68 RVLLGATKANIKLN-------WEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ L + + + N ++ + IA G+A+L+ + VHR++ A N ++
Sbjct: 108 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVA 164
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGV 175
+F KIGDFG+ + +I G G ++APE + G T +D++SFGV
Sbjct: 165 HDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 220
Query: 176 LVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV-DPELGEYPPNEIIRYMKVA 234
++ EI S L E +Q E+ L+ V D + P N R +
Sbjct: 221 VLWEITS---------------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLM 265
Query: 235 FFCTQAAASRRPQMNQVIKMLTKNIRLNEEELT 267
C Q + RP +++ +L ++ + E++
Sbjct: 266 RMCWQFNPNMRPTFLEIVNLLKDDLHPSFPEVS 298
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 7 GRRIAVKPLSAE--SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G+ +AV+ + + +++ E+ + + HPN+V+L LV EY
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+ L+ + K E R+ I + + H++ IVHRD+KA N+LLD + N
Sbjct: 99 EVFDYLVAHGRMKEK---EARAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMN 151
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM-KADVYSFGVLVLEIISG 183
KI DFG + F + G+ Y APE G + + DV+S GV++ ++SG
Sbjct: 152 IKIADFGFSNEF--TFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 9 RIAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
++AVK L S+Q +F+ E + +S H N+V IG +Q R ++ E + L
Sbjct: 79 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 138
Query: 68 RVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
L + + D + IA G +L E H +HRDI A N LL
Sbjct: 139 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-G 194
Query: 125 P----KIGDFGLAKLFPDNITHITTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVL 176
P KIGDFG+A+ D R G ++ PE + G T K D +SFGVL
Sbjct: 195 PGRVAKIGDFGMAR---DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 251
Query: 177 VLEIIS 182
+ EI S
Sbjct: 252 LWEIFS 257
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 122/273 (44%), Gaps = 37/273 (13%)
Query: 9 RIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
R+AVK ++ + R EF+ E + ++V L+G +G ++V E + + L
Sbjct: 50 RVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL- 108
Query: 68 RVLLGATKANIKLN-------WEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ L + + + N ++ + IA G+A+L+ + VHR++ A N ++
Sbjct: 109 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVA 165
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGV 175
+F KIGDFG+ + +I G G ++APE + G T +D++SFGV
Sbjct: 166 HDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 221
Query: 176 LVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV-DPELGEYPPNEIIRYMKVA 234
++ EI S L E +Q E+ L+ V D + P N R +
Sbjct: 222 VLWEITS---------------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLM 266
Query: 235 FFCTQAAASRRPQMNQVIKMLTKNIRLNEEELT 267
C Q + RP +++ +L ++ + E++
Sbjct: 267 RMCWQFNPNMRPTFLEIVNLLKDDLHPSFPEVS 299
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 12/183 (6%)
Query: 4 LTNGRRIAVKPLSAE--SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYV 61
+ GR +A+K + + +++ E+ + + HPN+V+L L+ EY
Sbjct: 34 ILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYA 93
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
+ L+ + K E RS I + + H++ IVHRD+KA N+LLD
Sbjct: 94 SGGEVFDYLVAHGRMKEK---EARSKF-RQIVSAVQYCHQK---RIVHRDLKAENLLLDA 146
Query: 122 EFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM-KADVYSFGVLVLEI 180
+ N KI DFG + F + G+ Y APE G + + DV+S GV++ +
Sbjct: 147 DMNIKIADFGFSNEF--TVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 204
Query: 181 ISG 183
+SG
Sbjct: 205 VSG 207
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 9 RIAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
++AVK L S+Q +F+ E + +S H N+V IG +Q R ++ E + L
Sbjct: 69 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 128
Query: 68 RVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
L + + D + IA G +L E H +HRDI A N LL
Sbjct: 129 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-G 184
Query: 125 P----KIGDFGLAKLFPDNITHITTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVL 176
P KIGDFG+A+ D R G ++ PE + G T K D +SFGVL
Sbjct: 185 PGRVAKIGDFGMAR---DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 241
Query: 177 VLEIIS 182
+ EI S
Sbjct: 242 LWEIFS 247
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 81/184 (44%), Gaps = 12/184 (6%)
Query: 5 TNGRRIAVKPLSAE---SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYV 61
GR A+K L E +K V +TE L N RHP L L R V EY
Sbjct: 33 ATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYA 92
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
L ++ + + ++ I L +LH E ++V+RD+K N++LD+
Sbjct: 93 NGGEL---FFHLSRERV-FSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDK 146
Query: 122 EFNPKIGDFGLAKL-FPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ + KI DFGL K D T GT YLAPE + D + GV++ E+
Sbjct: 147 DGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 204
Query: 181 ISGR 184
+ GR
Sbjct: 205 MCGR 208
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 12/180 (6%)
Query: 7 GRRIAVKPLSAE--SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G+ +AVK + + +++ E+ + + HPN+V+L LV EY
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+ L+ + K E R+ I + + H++ IVHRD+KA N+LLD + N
Sbjct: 99 EVFDYLVAHGRMKEK---EARAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMN 151
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM-KADVYSFGVLVLEIISG 183
KI DFG + F + G Y APE G + + DV+S GV++ ++SG
Sbjct: 152 IKIADFGFSNEF--TFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 9 RIAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
++AVK L S+Q +F+ E + +S H N+V IG +Q R ++ E + L
Sbjct: 54 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 113
Query: 68 RVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
L + + D + IA G +L E H +HRDI A N LL
Sbjct: 114 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-G 169
Query: 125 P----KIGDFGLAKLFPDNITHITTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVL 176
P KIGDFG+A+ D R G ++ PE + G T K D +SFGVL
Sbjct: 170 PGRVAKIGDFGMAR---DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 226
Query: 177 VLEIIS 182
+ EI S
Sbjct: 227 LWEIFS 232
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 9 RIAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
++AVK L S+Q +F+ E + +S H N+V IG +Q R ++ E + L
Sbjct: 62 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 121
Query: 68 RVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
L + + D + IA G +L E H +HRDI A N LL
Sbjct: 122 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-G 177
Query: 125 P----KIGDFGLAKLFPDNITHITTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVL 176
P KIGDFG+A+ D R G ++ PE + G T K D +SFGVL
Sbjct: 178 PGRVAKIGDFGMAR---DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 234
Query: 177 VLEIIS 182
+ EI S
Sbjct: 235 LWEIFS 240
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 7 GRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G A+K + E + +G+ I EI L ++H N+V+L R +LV+E+++ +
Sbjct: 26 GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQD 85
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+ LL + ++ K + + G+A+ H+ ++HRD+K N+L+++E
Sbjct: 86 L--KKLLDVCEGGLESVTAK--SFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGE 138
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 183
KI DFGLA+ F + T + T Y AP+ ++G + + D++S G + E+++G
Sbjct: 139 LKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 9 RIAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
++AVK L S+Q +F+ E + +S H N+V IG +Q R ++ E + L
Sbjct: 63 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 122
Query: 68 RVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
L + + D + IA G +L E H +HRDI A N LL
Sbjct: 123 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-G 178
Query: 125 P----KIGDFGLAKLFPDNITHITTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVL 176
P KIGDFG+A+ D R G ++ PE + G T K D +SFGVL
Sbjct: 179 PGRVAKIGDFGMAR---DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 235
Query: 177 VLEIIS 182
+ EI S
Sbjct: 236 LWEIFS 241
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 7 GRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G A+K + E + +G+ I EI L ++H N+V+L R +LV+E+++ +
Sbjct: 26 GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQD 85
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+ LL + ++ K + + G+A+ H+ ++HRD+K N+L+++E
Sbjct: 86 L--KKLLDVCEGGLESVTAK--SFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGE 138
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 183
KI DFGLA+ F + T + T Y AP+ ++G + + D++S G + E+++G
Sbjct: 139 LKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 19/189 (10%)
Query: 8 RRIAVKPLSAESKQGV-REFITEIMTLSNV-RHPNLVELIGCCVQ-GTRRILVYEYVENN 64
R +AVK L + R ++E+ L ++ H N+V L+G C + G +++ E+ +
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 65 SLDRVLLGATKANIK--------LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
+L L + L E +AKG+ FL +HRD+ A N
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASR---KXIHRDLAARN 174
Query: 117 ILLDQEFNPKIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSF 173
ILL ++ KI DFGLA+ PD + R+ ++APE + T+++DV+SF
Sbjct: 175 ILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSF 232
Query: 174 GVLVLEIIS 182
GVL+ EI S
Sbjct: 233 GVLLWEIFS 241
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 20/187 (10%)
Query: 6 NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
+G +IAVK LS +S + E+ L +++H N++ L+ T E +
Sbjct: 75 SGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATS----LEEFND 130
Query: 64 NSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILL 119
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ +
Sbjct: 131 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 187
Query: 120 DQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLV 177
+++ KI DFGLA+ D +T ++ TR Y APE +L M D++S G ++
Sbjct: 188 NEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNMTVDIWSVGCIM 242
Query: 178 LEIISGR 184
E+++GR
Sbjct: 243 AELLTGR 249
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 25 EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEK 84
E + E + + +P +V +IG C + +LV E E L++ L + N + +
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKN 128
Query: 85 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 144
++ ++ G+ +L E + VHRD+ A N+LL + KI DFGL+K + +
Sbjct: 129 IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 145 TRIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 200
+ G + APE + + + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 186 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 244
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 25 EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEK 84
E + E + + +P +V +IG C + +LV E E L++ L + N + +
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKN 128
Query: 85 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 144
++ ++ G+ +L E + VHRD+ A N+LL + KI DFGL+K + +
Sbjct: 129 IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 145 TRIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 200
+ G + APE + + + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 186 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 244
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 30 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 89
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 90 D-LKTFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 143
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + + T Y APE +LG + A D++S G + E+++
Sbjct: 144 AIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
Query: 183 GR 184
R
Sbjct: 203 RR 204
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 25 EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEK 84
E + E + + +P +V +IG C + +LV E E L++ L + N + +
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKN 126
Query: 85 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 144
++ ++ G+ +L E + VHRD+ A N+LL + KI DFGL+K + +
Sbjct: 127 IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 183
Query: 145 TRIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 200
+ G + APE + + + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 184 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 242
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 10 IAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K + VRE F+ E +T+ HP++V+LIG + I++ E L R
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGEL-R 98
Query: 69 VLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK 126
L K ++ L S I ++ LA+L + VHRDI A N+L+ K
Sbjct: 99 SFLQVRKFSLDLA----SLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVK 151
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 181
+GDFGL++ D+ + ++ ++APE + + T +DV+ FGV + EI+
Sbjct: 152 LGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 87 D-LKDFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEG 140
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + + T Y APE +LG + A D++S G + E+++
Sbjct: 141 AIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 183 GR 184
R
Sbjct: 200 RR 201
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 115/249 (46%), Gaps = 31/249 (12%)
Query: 6 NGRRIAVKPLSAESK-QGVREFITEIMTLSNVRHPNLVELIGCCV--QGTRRILVYEYVE 62
N + A+K LS ++ Q V F+ E + + + HPN++ LIG + +G +L+
Sbjct: 48 NRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCH 107
Query: 63 NNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQE 122
+ L + +K + +A+G+ +L E+ VHRD+ A N +LD+
Sbjct: 108 GDLLQFIRSPQRNPTVK----DLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDES 160
Query: 123 FNPKIGDFGLAKLFPDN-----ITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLV 177
F K+ DFGLA+ D H R+ + A E + + T K+DV+SFGVL+
Sbjct: 161 FTVKVADFGLARDILDREYYSVQQHRHARLP--VKWTALESLQTYRFTTKSDVWSFGVLL 218
Query: 178 LEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFC 237
E+++ G + ++ F L H + L P EY P+ + + M+ C
Sbjct: 219 WELLT---RGAPPYRHIDPFDLT-----HFLAQGRRLPQP---EYCPDSLYQVMQQ---C 264
Query: 238 TQAAASRRP 246
+A + RP
Sbjct: 265 WEADPAVRP 273
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 25 EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEK 84
E + E + + +P +V +IG C + +LV E E L++ L + N + +
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKN 470
Query: 85 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 144
++ ++ G+ +L E + VHRD+ A N+LL + KI DFGL+K + +
Sbjct: 471 IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527
Query: 145 TRIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 200
+ G + APE + + + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 586
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 10 IAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K + VRE F+ E +T+ HP++V+LIG + I+ ++
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII---------MEL 471
Query: 69 VLLGATKANI---KLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
LG ++ + K + + S I ++ LA+L + VHRDI A N+L+
Sbjct: 472 CTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSND 528
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 181
K+GDFGL++ D+ + ++ ++APE + + T +DV+ FGV + EI+
Sbjct: 529 CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 25 EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEK 84
E + E + + +P +V +IG C + +LV E E L++ L + N + +
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKN 471
Query: 85 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 144
++ ++ G+ +L E + VHRD+ A N+LL + KI DFGL+K + +
Sbjct: 472 IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 528
Query: 145 TRIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 200
+ G + APE + + + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 529 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 587
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 25 EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEK 84
E + E + + +P +V +IG C + +LV E E L++ L + N + +
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKN 118
Query: 85 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 144
++ ++ G+ +L E + VHRD+ A N+LL + KI DFGL+K + +
Sbjct: 119 IIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 175
Query: 145 TRIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 200
+ G + APE + + + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 176 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 234
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 9 RIAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
++AVK L S+Q +F+ E + +S H N+V IG +Q R ++ E + L
Sbjct: 63 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 122
Query: 68 RVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
L + + D + IA G +L E H +HRDI A N LL
Sbjct: 123 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-G 178
Query: 125 P----KIGDFGLAKLFPDNITHITTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVL 176
P KIGDFG+A+ D R G ++ PE + G T K D +SFGVL
Sbjct: 179 PGRVAKIGDFGMAQ---DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 235
Query: 177 VLEIIS 182
+ EI S
Sbjct: 236 LWEIFS 241
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 9 RIAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
++AVK L S+Q +F+ E + +S H N+V IG +Q R ++ E + L
Sbjct: 80 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 139
Query: 68 RVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
L + + D + IA G +L E H +HRDI A N LL
Sbjct: 140 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-G 195
Query: 125 P----KIGDFGLAKLFPDNITHITTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVL 176
P KIGDFG+A+ D R G ++ PE + G T K D +SFGVL
Sbjct: 196 PGRVAKIGDFGMAR---DIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 252
Query: 177 VLEIIS 182
+ EI S
Sbjct: 253 LWEIFS 258
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 9 RIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
R+A+K ++ + R EF+ E + ++V L+G QG +++ E + L
Sbjct: 47 RVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLK 106
Query: 68 ---RVLLGATKANIKL---NWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
R L A N L + K + IA G+A+L+ VHRD+ A N ++ +
Sbjct: 107 SYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 163
Query: 122 EFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVL 176
+F KIGDFG+ + +I G G +++PE + G T +DV+SFGV+
Sbjct: 164 DFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 219
Query: 177 VLEIIS 182
+ EI +
Sbjct: 220 LWEIAT 225
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 9 RIAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
++AVK L S+Q +F+ E + +S H N+V IG +Q R ++ E + L
Sbjct: 103 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 162
Query: 68 RVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
L + + D + IA G +L E H +HRDI A N LL
Sbjct: 163 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-G 218
Query: 125 P----KIGDFGLAKLFPDNITHITTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVL 176
P KIGDFG+A+ D R G ++ PE + G T K D +SFGVL
Sbjct: 219 PGRVAKIGDFGMAR---DIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 275
Query: 177 VLEIIS 182
+ EI S
Sbjct: 276 LWEIFS 281
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 7 GRRIAVKPLSAE--SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G+ +AV+ + + +++ E+ + + HPN+V+L LV EY
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+ L+ + K E R+ I + + H++ IVHRD+KA N+LLD + N
Sbjct: 99 EVFDYLVAHGRMKEK---EARAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMN 151
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM-KADVYSFGVLVLEIISG 183
KI DFG + F + G+ Y APE G + + DV+S GV++ ++SG
Sbjct: 152 IKIADFGFSNEF--TFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 4 LTNGRRIAVKPLSAE--SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYV 61
+ GR +A+K + + +++ E+ + + HPN+V+L L+ EY
Sbjct: 37 ILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYA 96
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
+ L+ + K E RS I + + H++ IVHRD+KA N+LLD
Sbjct: 97 SGGEVFDYLVAHGRMKEK---EARSKF-RQIVSAVQYCHQK---RIVHRDLKAENLLLDA 149
Query: 122 EFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM-KADVYSFGVLVLEI 180
+ N KI DFG + F + G Y APE G + + DV+S GV++ +
Sbjct: 150 DMNIKIADFGFSNEF--TVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 207
Query: 181 ISG 183
+SG
Sbjct: 208 VSG 210
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 98/195 (50%), Gaps = 27/195 (13%)
Query: 8 RRIAVKPLSAESKQGV-REFITEIMTLSNV-RHPNLVELIGCCVQ-GTRRILVYEYVENN 64
R +AVK L + R ++E+ L ++ H N+V L+G C + G +++ E+ +
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 65 SLDRVLLGATKANIKLNWEKRSD------------ICVG--IAKGLAFLHEELVPHIVHR 110
+L L +K N + +++ + IC +AKG+ FL +HR
Sbjct: 120 NLSTYL--RSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 174
Query: 111 DIKASNILLDQEFNPKIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYVLGGQLTMK 167
D+ A NILL ++ KI DFGLA+ PD + R+ ++APE + T++
Sbjct: 175 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP--LKWMAPETIFDRVYTIQ 232
Query: 168 ADVYSFGVLVLEIIS 182
+DV+SFGVL+ EI S
Sbjct: 233 SDVWSFGVLLWEIFS 247
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 9 RIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
R+A+K ++ + R EF+ E + ++V L+G QG +++ E + L
Sbjct: 57 RVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLK 116
Query: 68 ---RVLLGATKANIKL---NWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
R L A N L + K + IA G+A+L+ VHRD+ A N ++ +
Sbjct: 117 SYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 173
Query: 122 EFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVL 176
+F KIGDFG+ + +I G G +++PE + G T +DV+SFGV+
Sbjct: 174 DFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 229
Query: 177 VLEIIS 182
+ EI +
Sbjct: 230 LWEIAT 235
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 6 NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
N R+A+K +S E + + + EI L RH N++ + T + Y+ +
Sbjct: 47 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 106
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
++ L K L+ + I +GL ++H +++HRD+K SN+LL+ +
Sbjct: 107 LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXD 162
Query: 125 PKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 181
KI DFGLA++ PD + T T T Y APE +L + T D++S G ++ E++
Sbjct: 163 LKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 182 SGRN--SGKAMWGQMNKFL 198
S R GK Q+N L
Sbjct: 223 SNRPIFPGKHYLDQLNHIL 241
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 25 EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEK 84
E + E + + +P +V +IG C + +LV E E L++ L + N + +
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKN 112
Query: 85 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 144
++ ++ G+ +L E + VHRD+ A N+LL + KI DFGL+K + +
Sbjct: 113 IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 169
Query: 145 TRIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 200
+ G + APE + + + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 228
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 6 NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
N R+A+K +S E + + + EI L RH N++ + T + Y+ +
Sbjct: 47 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 106
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
++ L K L+ + I +GL ++H +++HRD+K SN+LL+ +
Sbjct: 107 LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXD 162
Query: 125 PKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 181
KI DFGLA++ PD + T T T Y APE +L + T D++S G ++ E++
Sbjct: 163 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 182 SGRN--SGKAMWGQMNKFL 198
S R GK Q+N L
Sbjct: 223 SNRPIFPGKHYLDQLNHIL 241
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 80/187 (42%), Gaps = 16/187 (8%)
Query: 7 GRRIAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVEL------IGCCVQGTRRILVYE 59
G ++A+K E RE + EI + + HPN+V + +L E
Sbjct: 39 GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 98
Query: 60 YVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILL 119
Y E L R L + L + I+ L +LHE I+HRD+K NI+L
Sbjct: 99 YCEGGDL-RKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVL 154
Query: 120 D---QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVL 176
Q KI D G AK + + T GT YLAPE + + T+ D +SFG L
Sbjct: 155 QPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTL 212
Query: 177 VLEIISG 183
E I+G
Sbjct: 213 AFECITG 219
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 25 EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEK 84
E + E + + +P +V +IG C + +LV E E L++ L + N + +
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKN 108
Query: 85 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 144
++ ++ G+ +L E + VHRD+ A N+LL + KI DFGL+K + +
Sbjct: 109 IIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 165
Query: 145 TRIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 200
+ G + APE + + + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 166 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 224
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 80/187 (42%), Gaps = 16/187 (8%)
Query: 7 GRRIAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVEL------IGCCVQGTRRILVYE 59
G ++A+K E RE + EI + + HPN+V + +L E
Sbjct: 40 GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 99
Query: 60 YVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILL 119
Y E L R L + L + I+ L +LHE I+HRD+K NI+L
Sbjct: 100 YCEGGDL-RKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVL 155
Query: 120 D---QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVL 176
Q KI D G AK + + T GT YLAPE + + T+ D +SFG L
Sbjct: 156 QPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTL 213
Query: 177 VLEIISG 183
E I+G
Sbjct: 214 AFECITG 220
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 12/175 (6%)
Query: 10 IAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K + VRE F+ E +T+ HP++V+LIG + I++ E L R
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGEL-R 98
Query: 69 VLLGATKANIKLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK 126
L K ++ L S I ++ LA+L + VHRDI A N+L+ K
Sbjct: 99 SFLQVRKFSLDLA----SLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVK 151
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 181
+GDFGL++ D+ ++ ++APE + + T +DV+ FGV + EI+
Sbjct: 152 LGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 18/183 (9%)
Query: 7 GRRIAVKPLSAE--SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G+ +AVK + + +++ E+ + + HPN+V+L LV EY
Sbjct: 32 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 91
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVG---IAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
+ L+ W K + I + + H++ IVHRD+KA N+LLD
Sbjct: 92 EVFDYLVAH-------GWMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDA 141
Query: 122 EFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM-KADVYSFGVLVLEI 180
+ N KI DFG + F + G+ Y APE G + + DV+S GV++ +
Sbjct: 142 DMNIKIADFGFSNEF--TFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 199
Query: 181 ISG 183
+SG
Sbjct: 200 VSG 202
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 6 NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
N R+A+K +S E + + + EI L RH N++ + T + Y+ +
Sbjct: 47 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 106
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
++ L K L+ + I +GL ++H +++HRD+K SN+LL+ +
Sbjct: 107 LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXD 162
Query: 125 PKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 181
KI DFGLA++ PD + T T T Y APE +L + T D++S G ++ E++
Sbjct: 163 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 182 SGRN--SGKAMWGQMNKFL 198
S R GK Q+N L
Sbjct: 223 SNRPIFPGKHYLDQLNHIL 241
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 6 NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
N R+A+K +S E + + + EI L RH N++ + T + Y+ +
Sbjct: 47 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 106
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
++ L K L+ + I +GL ++H +++HRD+K SN+LL+ +
Sbjct: 107 LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD 162
Query: 125 PKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 181
KI DFGLA++ PD + T T T Y APE +L + T D++S G ++ E++
Sbjct: 163 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 182 SGRN--SGKAMWGQMNKFL 198
S R GK Q+N L
Sbjct: 223 SNRPIFPGKHYLDQLNHIL 241
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 6 NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
N R+A+K +S E + + + EI L RH N++ + T + Y+ +
Sbjct: 51 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
++ L K L+ + I +GL ++H +++HRD+K SN+LL+ +
Sbjct: 111 LMETDLYKLLKCQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD 166
Query: 125 PKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 181
KI DFGLA++ PD + T T T Y APE +L + T D++S G ++ E++
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 182 SGRN--SGKAMWGQMNKFL 198
S R GK Q+N L
Sbjct: 227 SNRPIFPGKHYLDQLNHIL 245
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 25 EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEK 84
E + E + + +P +V +IG C + +LV E E L++ L + N + +
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKN 106
Query: 85 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 144
++ ++ G+ +L E + VHRD+ A N+LL + KI DFGL+K + +
Sbjct: 107 IIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 163
Query: 145 TRIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 200
+ G + APE + + + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 164 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 222
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 9 RIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
R+A+K ++ + R EF+ E + ++V L+G QG +++ E + L
Sbjct: 42 RVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLK 101
Query: 68 ---RVLLGATKANIKL---NWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
R L + N L + K + IA G+A+L+ VHRD+ A N ++ +
Sbjct: 102 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 158
Query: 122 EFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVL 176
+F KIGDFG+ + +I G G +++PE + G T +DV+SFGV+
Sbjct: 159 DFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 214
Query: 177 VLEIIS 182
+ EI +
Sbjct: 215 LWEIAT 220
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 6 NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
N R+A+K +S E + + + EI L RH N++ + T + Y+ +
Sbjct: 51 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
++ L K L+ + I +GL ++H +++HRD+K SN+LL+ +
Sbjct: 111 LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXD 166
Query: 125 PKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 181
KI DFGLA++ PD + T T T Y APE +L + T D++S G ++ E++
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 182 SGRN--SGKAMWGQMNKFL 198
S R GK Q+N L
Sbjct: 227 SNRPIFPGKHYLDQLNHIL 245
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 10 IAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 68
+A+K + VRE F+ E +T+ HP++V+LIG + I+ ++
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII---------MEL 471
Query: 69 VLLGATKANI---KLNWEKRSDICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
LG ++ + K + + S I ++ LA+L + VHRDI A N+L+
Sbjct: 472 CTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATD 528
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 181
K+GDFGL++ D+ + ++ ++APE + + T +DV+ FGV + EI+
Sbjct: 529 CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 6 NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
N R+A+K +S E + + + EI L RH N++ + T + Y+ +
Sbjct: 49 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 108
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
++ L K L+ + I +GL ++H +++HRD+K SN+LL+ +
Sbjct: 109 LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD 164
Query: 125 PKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 181
KI DFGLA++ PD + T T T Y APE +L + T D++S G ++ E++
Sbjct: 165 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
Query: 182 SGRN--SGKAMWGQMNKFL 198
S R GK Q+N L
Sbjct: 225 SNRPIFPGKHYLDQLNHIL 243
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 19/189 (10%)
Query: 8 RRIAVKPLSAESKQGV-REFITEIMTLSNV-RHPNLVELIGCCVQ-GTRRILVYEYVENN 64
R +AVK L + R ++E+ L ++ H N+V L+G C + G +++ E+ +
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 65 SLDRVLLGATKANIK--------LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
+L L + L E +AKG+ FL +HRD+ A N
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASR---KXIHRDLAARN 174
Query: 117 ILLDQEFNPKIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSF 173
ILL ++ KI DFGLA+ PD + R+ ++APE + T+++DV+SF
Sbjct: 175 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSF 232
Query: 174 GVLVLEIIS 182
GVL+ EI S
Sbjct: 233 GVLLWEIFS 241
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 21/191 (10%)
Query: 8 RRIAVKPLSAESKQGV-REFITEIMTLSNV-RHPNLVELIGCCVQ-GTRRILVYEYVENN 64
R +AVK L + R ++E+ L ++ H N+V L+G C + G +++ E+ +
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 65 SLDRVLLGATKANIK----------LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKA 114
+L L + L E +AKG+ FL +HRD+ A
Sbjct: 120 NLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASR---KXIHRDLAA 176
Query: 115 SNILLDQEFNPKIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVY 171
NILL ++ KI DFGLA+ PD + R+ ++APE + T+++DV+
Sbjct: 177 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP--LKWMAPETIFDRVYTIQSDVW 234
Query: 172 SFGVLVLEIIS 182
SFGVL+ EI S
Sbjct: 235 SFGVLLWEIFS 245
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 6 NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
N R+A+K +S E + + + EI L RH N++ + T + Y+ +
Sbjct: 45 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 104
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
++ L K L+ + I +GL ++H +++HRD+K SN+LL+ +
Sbjct: 105 LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD 160
Query: 125 PKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 181
KI DFGLA++ PD + T T T Y APE +L + T D++S G ++ E++
Sbjct: 161 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 220
Query: 182 SGRN--SGKAMWGQMNKFL 198
S R GK Q+N L
Sbjct: 221 SNRPIFPGKHYLDQLNHIL 239
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 6 NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
N R+A+K +S E + + + EI L RH N++ + T + Y+ +
Sbjct: 52 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 111
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
++ L K L+ + I +GL ++H +++HRD+K SN+LL+ +
Sbjct: 112 LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD 167
Query: 125 PKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 181
KI DFGLA++ PD + T T T Y APE +L + T D++S G ++ E++
Sbjct: 168 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 227
Query: 182 SGRN--SGKAMWGQMNKFL 198
S R GK Q+N L
Sbjct: 228 SNRPIFPGKHYLDQLNHIL 246
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 6 NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
N R+A+K +S E + + + EI L RH N++ + T + Y+ +
Sbjct: 53 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 112
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
++ L K L+ + I +GL ++H +++HRD+K SN+LL+ +
Sbjct: 113 LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD 168
Query: 125 PKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 181
KI DFGLA++ PD + T T T Y APE +L + T D++S G ++ E++
Sbjct: 169 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 228
Query: 182 SGRN--SGKAMWGQMNKFL 198
S R GK Q+N L
Sbjct: 229 SNRPIFPGKHYLDQLNHIL 247
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 6 NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
N R+A+K +S E + + + EI L RH N++ + T + Y+ +
Sbjct: 44 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 103
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
++ L K L+ + I +GL ++H +++HRD+K SN+LL+ +
Sbjct: 104 LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD 159
Query: 125 PKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 181
KI DFGLA++ PD + T T T Y APE +L + T D++S G ++ E++
Sbjct: 160 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 219
Query: 182 SGRN--SGKAMWGQMNKFL 198
S R GK Q+N L
Sbjct: 220 SNRPIFPGKHYLDQLNHIL 238
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 6 NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
N R+A+K +S E + + + EI L RH N++ + T + Y+ +
Sbjct: 51 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
++ L K L+ + I +GL ++H +++HRD+K SN+LL+ +
Sbjct: 111 LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD 166
Query: 125 PKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 181
KI DFGLA++ PD + T T T Y APE +L + T D++S G ++ E++
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 182 SGRN--SGKAMWGQMNKFL 198
S R GK Q+N L
Sbjct: 227 SNRPIFPGKHYLDQLNHIL 245
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 29 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM 88
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 89 D-LKDFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 142
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + + T Y APE +LG + A D++S G + E+++
Sbjct: 143 AIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
Query: 183 GR 184
R
Sbjct: 202 RR 203
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 10/182 (5%)
Query: 6 NGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
G +A+K + +++ +GV I EI L + HPN+V+L+ + LV+E++
Sbjct: 30 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM 89
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ L + + I L K + +GLAF H ++HRD+K N+L++ E
Sbjct: 90 D-LKDFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEG 143
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIIS 182
K+ DFGLA+ F + + T Y APE +LG + A D++S G + E+++
Sbjct: 144 AIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
Query: 183 GR 184
R
Sbjct: 203 RR 204
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 11/179 (6%)
Query: 25 EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEK 84
E + E + + +P +V +IG C + +LV E E L++ L + N + +
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKN 112
Query: 85 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF--PDNITH 142
++ ++ G+ +L E + VHRD+ A N+LL + KI DFGL+K +N
Sbjct: 113 IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK 169
Query: 143 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 200
T + APE + + + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 228
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 9 RIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
R+A+K ++ + R EF+ E + ++V L+G QG +++ E + L
Sbjct: 51 RVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLK 110
Query: 68 ---RVLLGATKANIKL---NWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
R L + N L + K + IA G+A+L+ VHRD+ A N ++ +
Sbjct: 111 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 167
Query: 122 EFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVL 176
+F KIGDFG+ + +I G G +++PE + G T +DV+SFGV+
Sbjct: 168 DFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 223
Query: 177 VLEIIS 182
+ EI +
Sbjct: 224 LWEIAT 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 6 NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
N R+A+K +S E + + + EI L RH N++ + T + Y+ +
Sbjct: 45 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 104
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
++ L K L+ + I +GL ++H +++HRD+K SN+LL+ +
Sbjct: 105 LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD 160
Query: 125 PKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 181
KI DFGLA++ PD + T T T Y APE +L + T D++S G ++ E++
Sbjct: 161 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 220
Query: 182 SGRN--SGKAMWGQMNKFL 198
S R GK Q+N L
Sbjct: 221 SNRPIFPGKHYLDQLNHIL 239
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
Query: 5 TNGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVEN 63
N R+A+K +S E + + + EI L RH N++ + T + Y+
Sbjct: 66 VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 125
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+ ++ L K L+ + I +GL ++H +++HRD+K SN+LL+
Sbjct: 126 DLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTC 181
Query: 124 NPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEI 180
+ KI DFGLA++ PD + T T T Y APE +L + T D++S G ++ E+
Sbjct: 182 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
Query: 181 ISGRN--SGKAMWGQMNKFL 198
+S R GK Q+N L
Sbjct: 242 LSNRPIFPGKHYLDQLNHIL 261
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 6 NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
N R+A+K +S E + + + EI L RH N++ + T + Y+ +
Sbjct: 51 NKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
++ L K L+ + I +GL ++H +++HRD+K SN+LL+ +
Sbjct: 111 LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXD 166
Query: 125 PKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 181
KI DFGLA++ PD + T T T Y APE +L + T D++S G ++ E++
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 182 SGRN--SGKAMWGQMNKFL 198
S R GK Q+N L
Sbjct: 227 SNRPIFPGKHYLDQLNHIL 245
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 92 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 151
I GL LH E IV+RD+K NILLD + +I D GLA P+ T I R+ GT
Sbjct: 295 ICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTV 349
Query: 152 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRN 185
GY+APE V + T D ++ G L+ E+I+G++
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS 383
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 6 NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
N R+A+K +S E + + + EI L RH N++ + T + Y+ +
Sbjct: 55 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 114
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
++ L K L+ + I +GL ++H +++HRD+K SN+LL+ +
Sbjct: 115 LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD 170
Query: 125 PKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 181
KI DFGLA++ PD + T T T Y APE +L + T D++S G ++ E++
Sbjct: 171 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 230
Query: 182 SGRN--SGKAMWGQMNKFL 198
S R GK Q+N L
Sbjct: 231 SNRPIFPGKHYLDQLNHIL 249
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 6 NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
N R+A+K +S E + + + EI L RH N++ + T + Y+ +
Sbjct: 47 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 106
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
++ L K L+ + I +GL ++H +++HRD+K SN+LL+ +
Sbjct: 107 LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD 162
Query: 125 PKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 181
KI DFGLA++ PD + T T T Y APE +L + T D++S G ++ E++
Sbjct: 163 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 182 SGRN--SGKAMWGQMNKFL 198
S R GK Q+N L
Sbjct: 223 SNRPIFPGKHYLDQLNHIL 241
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 27/195 (13%)
Query: 8 RRIAVKPLSAESKQGV-REFITEIMTLSNV-RHPNLVELIGCCVQ-GTRRILVYEYVENN 64
R +AVK L + R ++E+ L ++ H N+V L+G C + G +++ E+ +
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 65 SLDRVLLGATKANIKLNWEKRSD------------ICVG--IAKGLAFLHEELVPHIVHR 110
+L L +K N + ++ + IC +AKG+ FL +HR
Sbjct: 118 NLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 172
Query: 111 DIKASNILLDQEFNPKIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYVLGGQLTMK 167
D+ A NILL ++ KI DFGLA+ PD + R+ ++APE + T++
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP--LKWMAPETIFDRVYTIQ 230
Query: 168 ADVYSFGVLVLEIIS 182
+DV+SFGVL+ EI S
Sbjct: 231 SDVWSFGVLLWEIFS 245
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 6 NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
N R+A+K +S E + + + EI L RH N++ + T + Y+ +
Sbjct: 49 NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQD 108
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
++ L K L+ + I +GL ++H +++HRD+K SN+LL+ +
Sbjct: 109 LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD 164
Query: 125 PKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 181
KI DFGLA++ PD + T T T Y APE +L + T D++S G ++ E++
Sbjct: 165 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
Query: 182 SGRN--SGKAMWGQMNKFL 198
S R GK Q+N L
Sbjct: 225 SNRPIFPGKHYLDQLNHIL 243
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 27/195 (13%)
Query: 8 RRIAVKPLSAESKQGV-REFITEIMTLSNV-RHPNLVELIGCCVQ-GTRRILVYEYVENN 64
R +AVK L + R ++E+ L ++ H N+V L+G C + G +++ E+ +
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 108
Query: 65 SLDRVLLGATKANIKLNWEKRSD------------ICVG--IAKGLAFLHEELVPHIVHR 110
+L L +K N + ++ + IC +AKG+ FL +HR
Sbjct: 109 NLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 163
Query: 111 DIKASNILLDQEFNPKIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYVLGGQLTMK 167
D+ A NILL ++ KI DFGLA+ PD + R+ ++APE + T++
Sbjct: 164 DLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP--LKWMAPETIFDRVYTIQ 221
Query: 168 ADVYSFGVLVLEIIS 182
+DV+SFGVL+ EI S
Sbjct: 222 SDVWSFGVLLWEIFS 236
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 27/195 (13%)
Query: 8 RRIAVKPLSAESKQGV-REFITEIMTLSNV-RHPNLVELIGCCVQ-GTRRILVYEYVENN 64
R +AVK L + R ++E+ L ++ H N+V L+G C + G +++ E+ +
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 65 SLDRVLLGATKANIKLNWEKRSD------------ICVG--IAKGLAFLHEELVPHIVHR 110
+L L +K N + ++ + IC +AKG+ FL +HR
Sbjct: 118 NLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 172
Query: 111 DIKASNILLDQEFNPKIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYVLGGQLTMK 167
D+ A NILL ++ KI DFGLA+ PD + R+ ++APE + T++
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLP--LKWMAPETIFDRVYTIQ 230
Query: 168 ADVYSFGVLVLEIIS 182
+DV+SFGVL+ EI S
Sbjct: 231 SDVWSFGVLLWEIFS 245
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 92 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 151
I GL LH E IV+RD+K NILLD + +I D GLA P+ T I R+ GT
Sbjct: 295 ICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTV 349
Query: 152 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRN 185
GY+APE V + T D ++ G L+ E+I+G++
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS 383
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 27/195 (13%)
Query: 8 RRIAVKPLSAESKQGV-REFITEIMTLSNV-RHPNLVELIGCCVQ-GTRRILVYEYVENN 64
R +AVK L + R ++E+ L ++ H N+V L+G C + G +++ E+ +
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 65 SLDRVLLGATKANIKLNWEKRSD------------ICVG--IAKGLAFLHEELVPHIVHR 110
+L L +K N + ++ + IC +AKG+ FL +HR
Sbjct: 109 NLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 163
Query: 111 DIKASNILLDQEFNPKIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYVLGGQLTMK 167
D+ A NILL ++ KI DFGLA+ PD + R+ ++APE + T++
Sbjct: 164 DLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP--LKWMAPETIFDRVYTIQ 221
Query: 168 ADVYSFGVLVLEIIS 182
+DV+SFGVL+ EI S
Sbjct: 222 SDVWSFGVLLWEIFS 236
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 88/186 (47%), Gaps = 12/186 (6%)
Query: 3 TLTNGRRIAVKPLSAES--KQG-VREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYE 59
++ G +A+K + ++ K G V+ E+ ++HP+++EL LV E
Sbjct: 32 SIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLE 91
Query: 60 YVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILL 119
N ++R L K + + I G+ +LH I+HRD+ SN+LL
Sbjct: 92 MCHNGEMNRYLKNRVKP---FSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLL 145
Query: 120 DQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVL 178
+ N KI DFGLA +L + H T + GT Y++PE +++DV+S G +
Sbjct: 146 TRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEIATRSAHGLESDVWSLGCMFY 203
Query: 179 EIISGR 184
++ GR
Sbjct: 204 TLLIGR 209
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 27/195 (13%)
Query: 8 RRIAVKPLSAESKQGV-REFITEIMTLSNV-RHPNLVELIGCCVQ-GTRRILVYEYVENN 64
R +AVK L + R ++E+ L ++ H N+V L+G C + G +++ E+ +
Sbjct: 95 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 154
Query: 65 SLDRVLLGATKANIKLNWEKRSD------------ICVG--IAKGLAFLHEELVPHIVHR 110
+L L +K N + ++ + IC +AKG+ FL +HR
Sbjct: 155 NLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 209
Query: 111 DIKASNILLDQEFNPKIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYVLGGQLTMK 167
D+ A NILL ++ KI DFGLA+ PD + R+ ++APE + T++
Sbjct: 210 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP--LKWMAPETIFDRVYTIQ 267
Query: 168 ADVYSFGVLVLEIIS 182
+DV+SFGVL+ EI S
Sbjct: 268 SDVWSFGVLLWEIFS 282
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 9 RIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
R+A+K ++ + R EF+ E + ++V L+G QG +++ E + L
Sbjct: 57 RVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLK 116
Query: 68 ---RVLLGATKANIKL---NWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
R L + N L + K + IA G+A+L+ VHRD+ A N ++ +
Sbjct: 117 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 173
Query: 122 EFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVL 176
+F KIGDFG+ + +I G G +++PE + G T +DV+SFGV+
Sbjct: 174 DFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 229
Query: 177 VLEIIS 182
+ EI +
Sbjct: 230 LWEIAT 235
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 27/195 (13%)
Query: 8 RRIAVKPLSAESKQGV-REFITEIMTLSNV-RHPNLVELIGCCVQ-GTRRILVYEYVENN 64
R +AVK L + R ++E+ L ++ H N+V L+G C + G +++ E+ +
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 65 SLDRVLLGATKANIKLNWEKRSD------------ICVG--IAKGLAFLHEELVPHIVHR 110
+L L +K N + ++ + IC +AKG+ FL +HR
Sbjct: 118 NLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 172
Query: 111 DIKASNILLDQEFNPKIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYVLGGQLTMK 167
D+ A NILL ++ KI DFGLA+ PD + R+ ++APE + T++
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP--LKWMAPETIFDRVYTIQ 230
Query: 168 ADVYSFGVLVLEIIS 182
+DV+SFGVL+ EI S
Sbjct: 231 SDVWSFGVLLWEIFS 245
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 92 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 151
I GL LH+ +I++RD+K N+LLD + N +I D GLA T T AGT
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTP 353
Query: 152 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA 189
G++APE +LG + D ++ GV + E+I+ R +A
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 92 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 151
I GL LH+ +I++RD+K N+LLD + N +I D GLA T T AGT
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTP 353
Query: 152 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA 189
G++APE +LG + D ++ GV + E+I+ R +A
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 92 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 151
I GL LH+ +I++RD+K N+LLD + N +I D GLA T T AGT
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTP 353
Query: 152 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA 189
G++APE +LG + D ++ GV + E+I+ R +A
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 12/180 (6%)
Query: 7 GRRIAVKPLSAE--SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G+ +AVK + + +++ E+ + HPN+V+L LV EY
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGG 98
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+ L+ + K E R+ I + + H++ IVHRD+KA N+LLD + N
Sbjct: 99 EVFDYLVAHGRXKEK---EARAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLDADXN 151
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM-KADVYSFGVLVLEIISG 183
KI DFG + F + G Y APE G + + DV+S GV++ ++SG
Sbjct: 152 IKIADFGFSNEF--TFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 92 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 151
I GL LH+ +I++RD+K N+LLD + N +I D GLA T T AGT
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTP 353
Query: 152 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA 189
G++APE +LG + D ++ GV + E+I+ R +A
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 9 RIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
R+A+K ++ + R EF+ E + ++V L+G QG +++ E + L
Sbjct: 44 RVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLK 103
Query: 68 ---RVLLGATKANIKL---NWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
R L + N L + K + IA G+A+L+ VHRD+ A N ++ +
Sbjct: 104 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 160
Query: 122 EFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVL 176
+F KIGDFG+ + +I G G +++PE + G T +DV+SFGV+
Sbjct: 161 DFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 216
Query: 177 VLEIIS 182
+ EI +
Sbjct: 217 LWEIAT 222
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 9 RIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
R+A+K ++ + R EF+ E + ++V L+G QG +++ E + L
Sbjct: 50 RVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLK 109
Query: 68 ---RVLLGATKANIKL---NWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
R L + N L + K + IA G+A+L+ VHRD+ A N ++ +
Sbjct: 110 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 166
Query: 122 EFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVL 176
+F KIGDFG+ + +I G G +++PE + G T +DV+SFGV+
Sbjct: 167 DFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 222
Query: 177 VLEIIS 182
+ EI +
Sbjct: 223 LWEIAT 228
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 27/195 (13%)
Query: 8 RRIAVKPLSAESKQGV-REFITEIMTLSNV-RHPNLVELIGCCVQ-GTRRILVYEYVENN 64
R +AVK L + R ++E+ L ++ H N+V L+G C + G +++ E+ +
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 65 SLDRVLLGATKANIKLNWEKRSD------------ICVG--IAKGLAFLHEELVPHIVHR 110
+L L +K N + ++ + IC +AKG+ FL +HR
Sbjct: 109 NLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 163
Query: 111 DIKASNILLDQEFNPKIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYVLGGQLTMK 167
D+ A NILL ++ KI DFGLA+ PD + R+ ++APE + T++
Sbjct: 164 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP--LKWMAPETIFDRVYTIQ 221
Query: 168 ADVYSFGVLVLEIIS 182
+DV+SFGVL+ EI S
Sbjct: 222 SDVWSFGVLLWEIFS 236
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 9 RIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
R+A+K ++ + R EF+ E + ++V L+G QG +++ E + L
Sbjct: 48 RVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLK 107
Query: 68 ---RVLLGATKANIKL---NWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
R L + N L + K + IA G+A+L+ VHRD+ A N ++ +
Sbjct: 108 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 164
Query: 122 EFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVL 176
+F KIGDFG+ + +I G G +++PE + G T +DV+SFGV+
Sbjct: 165 DFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 220
Query: 177 VLEIIS 182
+ EI +
Sbjct: 221 LWEIAT 226
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 27/195 (13%)
Query: 8 RRIAVKPLSAESKQGV-REFITEIMTLSNV-RHPNLVELIGCCVQ-GTRRILVYEYVENN 64
R +AVK L + R ++E+ L ++ H N+V L+G C + G +++ E+ +
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 65 SLDRVLLGATKANIKLNWEKRSD------------ICVG--IAKGLAFLHEELVPHIVHR 110
+L L +K N + ++ + IC +AKG+ FL +HR
Sbjct: 109 NLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 163
Query: 111 DIKASNILLDQEFNPKIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYVLGGQLTMK 167
D+ A NILL ++ KI DFGLA+ PD + R+ ++APE + T++
Sbjct: 164 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP--LKWMAPETIFDRVYTIQ 221
Query: 168 ADVYSFGVLVLEIIS 182
+DV+SFGVL+ EI S
Sbjct: 222 SDVWSFGVLLWEIFS 236
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 83/161 (51%), Gaps = 15/161 (9%)
Query: 27 ITEIMTLSNVRHPNLVELIGCCVQGTRRILVYE-YVENNSLDRVLLGATKANIKLNWEKR 85
+ E+ L + HPN+++L + +V E Y D ++ + +
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII-----KRKRFSEHDA 123
Query: 86 SDICVGIAKGLAFLHEELVPHIVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNITH 142
+ I + G+ ++H+ +IVHRD+K NILL +++ + KI DFGL+ F N T
Sbjct: 124 ARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TK 179
Query: 143 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
+ RI GT Y+APE VL G K DV+S GV++ ++SG
Sbjct: 180 MKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 9 RIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
R+A+K ++ + R EF+ E + ++V L+G QG +++ E + L
Sbjct: 51 RVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLK 110
Query: 68 ---RVLLGATKANIKL---NWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
R L + N L + K + IA G+A+L+ VHRD+ A N ++ +
Sbjct: 111 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 167
Query: 122 EFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVL 176
+F KIGDFG+ + +I G G +++PE + G T +DV+SFGV+
Sbjct: 168 DFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 223
Query: 177 VLEIIS 182
+ EI +
Sbjct: 224 LWEIAT 229
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 6 NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
N R+A++ +S E + + + EI L RH N++ + T + Y+ +
Sbjct: 51 NKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
++ L K L+ + I +GL ++H +++HRD+K SN+LL+ +
Sbjct: 111 LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD 166
Query: 125 PKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 181
KI DFGLA++ PD + T T T Y APE +L + T D++S G ++ E++
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 182 SGRN--SGKAMWGQMNKFL 198
S R GK Q+N L
Sbjct: 227 SNRPIFPGKHYLDQLNHIL 245
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 9 RIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
R+A+K ++ + R EF+ E + ++V L+G QG +++ E + L
Sbjct: 50 RVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLK 109
Query: 68 ---RVLLGATKANIKL---NWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
R L + N L + K + IA G+A+L+ VHRD+ A N ++ +
Sbjct: 110 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 166
Query: 122 EFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVL 176
+F KIGDFG+ + +I G G +++PE + G T +DV+SFGV+
Sbjct: 167 DFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 222
Query: 177 VLEIIS 182
+ EI +
Sbjct: 223 LWEIAT 228
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 6 NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
N R+A+K +S E + + + EI L RH N++ + T + Y+ +
Sbjct: 49 NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQD 108
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
++ L K L+ + I +GL ++H +++HRD+K SN+LL+ +
Sbjct: 109 LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTSD 164
Query: 125 PKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 181
KI DFGLA++ PD + T T T Y APE +L + T D++S G ++ E++
Sbjct: 165 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
Query: 182 SGRN--SGKAMWGQMNKFL 198
S R GK Q+N L
Sbjct: 225 SNRPIFPGKHYLDQLNHIL 243
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 24/238 (10%)
Query: 25 EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEK 84
+F+ E L HPN+V LIG C Q +V E V+ L +L +
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL---RTEGARLRVKT 214
Query: 85 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 144
+ A G+ +L + +HRD+ A N L+ ++ KI DFG+++ D + +
Sbjct: 215 LLQMVGDAAAGMEYLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAAS 271
Query: 145 TRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWA 202
+ + APE + G+ + ++DV+SFG+L+ E S G + + Q + +
Sbjct: 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV--- 328
Query: 203 WQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 260
EK L PEL P+ + R M+ C +RP + + + L ++IR
Sbjct: 329 ------EKGGRLPCPELC---PDAVFRLMEQ---CWAYEPGQRPSFSTIYQEL-QSIR 373
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 83/161 (51%), Gaps = 15/161 (9%)
Query: 27 ITEIMTLSNVRHPNLVELIGCCVQGTRRILVYE-YVENNSLDRVLLGATKANIKLNWEKR 85
+ E+ L + HPN+++L + +V E Y D ++ + +
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII-----KRKRFSEHDA 123
Query: 86 SDICVGIAKGLAFLHEELVPHIVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNITH 142
+ I + G+ ++H+ +IVHRD+K NILL +++ + KI DFGL+ F N T
Sbjct: 124 ARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TK 179
Query: 143 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
+ RI GT Y+APE VL G K DV+S GV++ ++SG
Sbjct: 180 MKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 9 RIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
R+A+K ++ + R EF+ E + ++V L+G QG +++ E + L
Sbjct: 79 RVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLK 138
Query: 68 ---RVLLGATKANIKL---NWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
R L + N L + K + IA G+A+L+ VHRD+ A N ++ +
Sbjct: 139 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 195
Query: 122 EFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVL 176
+F KIGDFG+ + +I G G +++PE + G T +DV+SFGV+
Sbjct: 196 DFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 251
Query: 177 VLEIIS 182
+ EI +
Sbjct: 252 LWEIAT 257
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 17/179 (9%)
Query: 11 AVKPLSAES--KQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYE-YVENNSLD 67
AVK ++ S + + E+ L + HPN+++L + +V E Y D
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFD 110
Query: 68 RVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILL---DQEFN 124
++ + + + I + G+ ++H+ +IVHRD+K NILL +++ +
Sbjct: 111 EII-----KRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCD 162
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
KI DFGL+ F N T + RI GT Y+APE VL G K DV+S GV++ ++SG
Sbjct: 163 IKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 24/238 (10%)
Query: 25 EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEK 84
+F+ E L HPN+V LIG C Q +V E V+ L +L +
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL---RTEGARLRVKT 214
Query: 85 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 144
+ A G+ +L + +HRD+ A N L+ ++ KI DFG+++ D + +
Sbjct: 215 LLQMVGDAAAGMEYLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS 271
Query: 145 TRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWA 202
+ + APE + G+ + ++DV+SFG+L+ E S G + + Q + +
Sbjct: 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV--- 328
Query: 203 WQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 260
EK L PEL P+ + R M+ C +RP + + + L ++IR
Sbjct: 329 ------EKGGRLPCPELC---PDAVFRLMEQ---CWAYEPGQRPSFSTIYQEL-QSIR 373
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 13/158 (8%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
EI L +RHP++++L T ++V EY D ++ ++ ++
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIV-----EKKRMTEDEGRRF 113
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 148
I + + H IVHRD+K N+LLD N KI DFGL+ + D T+
Sbjct: 114 FQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--C 168
Query: 149 GTTGYLAPEYVLGGQLTM--KADVYSFGVLVLEIISGR 184
G+ Y APE V+ G+L + DV+S G+++ ++ GR
Sbjct: 169 GSPNYAAPE-VINGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 36/210 (17%)
Query: 6 NGRRIAVKPLSAESKQGVREFITEIMTLSNVRHP-------------NLVELIGCCVQGT 52
+ R A+K + +++ + ++E+M L+++ H N V+ + + +
Sbjct: 30 DSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKS 88
Query: 53 RRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDI 112
+ EY EN +L ++ N+ ++ + I + L+++H + I+HRD+
Sbjct: 89 TLFIQMEYCENRTLYDLI---HSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDL 142
Query: 113 KASNILLDQEFNPKIGDFGLAK--------------LFPDNITHITTRIAGTTGYLAPEY 158
K NI +D+ N KIGDFGLAK P + ++T+ I GT Y+A E
Sbjct: 143 KPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI-GTAMYVATEV 201
Query: 159 VLG-GQLTMKADVYSFGVLVLEIISGRNSG 187
+ G G K D+YS G++ E+I ++G
Sbjct: 202 LDGTGHYNEKIDMYSLGIIFFEMIYPFSTG 231
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 88/194 (45%), Gaps = 28/194 (14%)
Query: 7 GRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQG----TRRILVYEYV 61
G +AVK S+ E + RE EI +RH N++ I + T+ LV +Y
Sbjct: 26 GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 83
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV-----PHIVHRDIKASN 116
E+ SL L T + E + + A GLA LH E+V P I HRD+K+ N
Sbjct: 84 EHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN 138
Query: 117 ILLDQEFNPKIGDFGLA---KLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMK------ 167
IL+ + I D GLA D I GT Y+APE VL + MK
Sbjct: 139 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFK 197
Query: 168 -ADVYSFGVLVLEI 180
AD+Y+ G++ EI
Sbjct: 198 RADIYAMGLVFWEI 211
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 36/210 (17%)
Query: 6 NGRRIAVKPLSAESKQGVREFITEIMTLSNVRHP-------------NLVELIGCCVQGT 52
+ R A+K + +++ + ++E+M L+++ H N V+ + + +
Sbjct: 30 DSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKS 88
Query: 53 RRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDI 112
+ EY EN +L ++ N+ ++ + I + L+++H + I+HRD+
Sbjct: 89 TLFIQMEYCENGTLYDLI---HSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDL 142
Query: 113 KASNILLDQEFNPKIGDFGLAK--------------LFPDNITHITTRIAGTTGYLAPEY 158
K NI +D+ N KIGDFGLAK P + ++T+ I GT Y+A E
Sbjct: 143 KPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI-GTAMYVATEV 201
Query: 159 VLG-GQLTMKADVYSFGVLVLEIISGRNSG 187
+ G G K D+YS G++ E+I ++G
Sbjct: 202 LDGTGHYNEKIDMYSLGIIFFEMIYPFSTG 231
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 88/194 (45%), Gaps = 28/194 (14%)
Query: 7 GRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQG----TRRILVYEYV 61
G +AVK S+ E + RE EI +RH N++ I + T+ LV +Y
Sbjct: 27 GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 84
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV-----PHIVHRDIKASN 116
E+ SL L T + E + + A GLA LH E+V P I HRD+K+ N
Sbjct: 85 EHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN 139
Query: 117 ILLDQEFNPKIGDFGLA---KLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMK------ 167
IL+ + I D GLA D I GT Y+APE VL + MK
Sbjct: 140 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFK 198
Query: 168 -ADVYSFGVLVLEI 180
AD+Y+ G++ EI
Sbjct: 199 RADIYAMGLVFWEI 212
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 102
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 103 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 159
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 160 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 179 EIISGR 184
E+++GR
Sbjct: 215 ELLTGR 220
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 88/194 (45%), Gaps = 28/194 (14%)
Query: 7 GRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQG----TRRILVYEYV 61
G +AVK S+ E + RE EI +RH N++ I + T+ LV +Y
Sbjct: 32 GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 89
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV-----PHIVHRDIKASN 116
E+ SL L T + E + + A GLA LH E+V P I HRD+K+ N
Sbjct: 90 EHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN 144
Query: 117 ILLDQEFNPKIGDFGLA---KLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMK------ 167
IL+ + I D GLA D I GT Y+APE VL + MK
Sbjct: 145 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFK 203
Query: 168 -ADVYSFGVLVLEI 180
AD+Y+ G++ EI
Sbjct: 204 RADIYAMGLVFWEI 217
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 105/219 (47%), Gaps = 17/219 (7%)
Query: 9 RIAVK--PLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRR-----ILVYEYV 61
++AVK L S++ + EF++E + + HPN++ L+G C++ + + +++ ++
Sbjct: 64 KVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFM 123
Query: 62 ENNSLDRVLLGA--TKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILL 119
+ L LL + + + V IA G+ +L + +HRD+ A N +L
Sbjct: 124 KYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCML 180
Query: 120 DQEFNPKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVL 178
+ + DFGL+K + RIA ++A E + T K+DV++FGV +
Sbjct: 181 RDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMW 240
Query: 179 EIISGRNSGKAMW-GQMNKFLLEWAWQLHQEEKPLELVD 216
EI + G + G N + ++ H+ ++P + +D
Sbjct: 241 EIAT---RGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLD 276
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 88/194 (45%), Gaps = 28/194 (14%)
Query: 7 GRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQG----TRRILVYEYV 61
G +AVK S+ E + RE EI +RH N++ I + T+ LV +Y
Sbjct: 65 GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 122
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV-----PHIVHRDIKASN 116
E+ SL L T + E + + A GLA LH E+V P I HRD+K+ N
Sbjct: 123 EHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN 177
Query: 117 ILLDQEFNPKIGDFGLA---KLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMK------ 167
IL+ + I D GLA D I GT Y+APE VL + MK
Sbjct: 178 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFK 236
Query: 168 -ADVYSFGVLVLEI 180
AD+Y+ G++ EI
Sbjct: 237 RADIYAMGLVFWEI 250
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 88/194 (45%), Gaps = 28/194 (14%)
Query: 7 GRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQG----TRRILVYEYV 61
G +AVK S+ E + RE EI +RH N++ I + T+ LV +Y
Sbjct: 52 GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 109
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV-----PHIVHRDIKASN 116
E+ SL L T + E + + A GLA LH E+V P I HRD+K+ N
Sbjct: 110 EHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN 164
Query: 117 ILLDQEFNPKIGDFGLA---KLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMK------ 167
IL+ + I D GLA D I GT Y+APE VL + MK
Sbjct: 165 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFK 223
Query: 168 -ADVYSFGVLVLEI 180
AD+Y+ G++ EI
Sbjct: 224 RADIYAMGLVFWEI 237
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 88/194 (45%), Gaps = 28/194 (14%)
Query: 7 GRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQG----TRRILVYEYV 61
G +AVK S+ E + RE EI +RH N++ I + T+ LV +Y
Sbjct: 29 GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 86
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV-----PHIVHRDIKASN 116
E+ SL L T + E + + A GLA LH E+V P I HRD+K+ N
Sbjct: 87 EHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN 141
Query: 117 ILLDQEFNPKIGDFGLA---KLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMK------ 167
IL+ + I D GLA D I GT Y+APE VL + MK
Sbjct: 142 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFK 200
Query: 168 -ADVYSFGVLVLEI 180
AD+Y+ G++ EI
Sbjct: 201 RADIYAMGLVFWEI 214
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 9 RIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD 67
R+A+K ++ + R EF+ E + ++V L+G QG +++ E + L
Sbjct: 44 RVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLK 103
Query: 68 ---RVLLGATKANIKL---NWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
R L + N L + K + IA G+A+L+ VHRD+ A N + +
Sbjct: 104 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAE 160
Query: 122 EFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVL 176
+F KIGDFG+ + +I G G +++PE + G T +DV+SFGV+
Sbjct: 161 DFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 216
Query: 177 VLEIIS 182
+ EI +
Sbjct: 217 LWEIAT 222
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 102
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 103 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 159
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 160 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNAMHYNQTVDIWSVGCIMA 214
Query: 179 EIISGR 184
E+++GR
Sbjct: 215 ELLTGR 220
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 10/199 (5%)
Query: 6 NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
N R+A+K +S E + + + EI L RH N++ + T + Y+ +
Sbjct: 51 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
++ L K L+ + I +GL ++H +++HRD+K SN+LL+ +
Sbjct: 111 LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD 166
Query: 125 PKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 181
KI DFGLA++ PD + T T Y APE +L + T D++S G ++ E++
Sbjct: 167 LKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 182 SGRN--SGKAMWGQMNKFL 198
S R GK Q+N L
Sbjct: 227 SNRPIFPGKHYLDQLNHIL 245
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 10/199 (5%)
Query: 6 NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
N R+A+K +S E + + + EI L RH N++ + T + Y+ +
Sbjct: 52 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 111
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
++ L K L+ + I +GL ++H +++HRD+K SN+LL+ +
Sbjct: 112 LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD 167
Query: 125 PKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 181
KI DFGLA++ PD + T T Y APE +L + T D++S G ++ E++
Sbjct: 168 LKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 227
Query: 182 SGRN--SGKAMWGQMNKFL 198
S R GK Q+N L
Sbjct: 228 SNRPIFPGKHYLDQLNHIL 246
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 57 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 112
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 113 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 169
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 170 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 224
Query: 179 EIISGR 184
E+++GR
Sbjct: 225 ELLTGR 230
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 53 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 108
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 109 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 165
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 166 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 179 EIISGR 184
E+++GR
Sbjct: 221 ELLTGR 226
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 67 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 122
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 123 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 179
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 180 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 234
Query: 179 EIISGR 184
E+++GR
Sbjct: 235 ELLTGR 240
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 98
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 99 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVN 155
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 156 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 210
Query: 179 EIISGR 184
E+++GR
Sbjct: 211 ELLTGR 216
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 98
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 99 YLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVN 155
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 156 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 210
Query: 179 EIISGR 184
E+++GR
Sbjct: 211 ELLTGR 216
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 102
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 103 YLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 159
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 160 EDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 179 EIISGR 184
E+++GR
Sbjct: 215 ELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 66 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 121
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 122 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 178
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 179 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 233
Query: 179 EIISGR 184
E+++GR
Sbjct: 234 ELLTGR 239
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 15/168 (8%)
Query: 19 SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANI 78
K+ VR+ EI T+S +RHP LV L +++YE++ L +
Sbjct: 91 DKETVRK---EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL---FEKVADEHN 144
Query: 79 KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP--KIGDFGL-AKL 135
K++ ++ + + KGL +HE + VH D+K NI+ + + K+ DFGL A L
Sbjct: 145 KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 201
Query: 136 FPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
P +TT GT + APE G + D++S GVL ++SG
Sbjct: 202 DPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
Query: 28 TEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD 87
TEI L N+RH ++ +L + +V EY L ++ + L+ E+
Sbjct: 57 TEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR----LSEEETRV 112
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 147
+ I +A++H + HRD+K N+L D+ K+ DFGL N +
Sbjct: 113 VFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTC 169
Query: 148 AGTTGYLAPEYVLG-GQLTMKADVYSFGVLVLEIISG 183
G+ Y APE + G L +ADV+S G+L+ ++ G
Sbjct: 170 CGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 13/170 (7%)
Query: 16 SAESKQGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGAT 74
S K+GV + EI S++RHPN++ + R L+ E+ L + L
Sbjct: 50 SQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL---- 105
Query: 75 KANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK 134
+ + + + ++ + +A L + HE V +HRDIK N+L+ + KI DFG +
Sbjct: 106 QKHGRFDEQRSATFMEELADALHYCHERKV---IHRDIKPENLLMGYKGELKIADFGWSV 162
Query: 135 LFPDNITHITTR-IAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
P + R + GT YL PE + G K D++ GVL E + G
Sbjct: 163 HAPS----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 10 IAVKPLSAES---KQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL 66
+A+K ++ E+ K+G E EI L ++HPN+V L G L+ + V L
Sbjct: 46 VAIKCIAKEALEGKEGSME--NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 67 -DRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNIL---LDQE 122
DR++ S + + + +LH+ IVHRD+K N+L LD++
Sbjct: 104 FDRIVEKGFYTE-----RDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDED 155
Query: 123 FNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
I DFGL+K+ ++ + + GT GY+APE + + D +S GV+ ++
Sbjct: 156 SKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 183 G 183
G
Sbjct: 214 G 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 16 SAESKQGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGAT 74
S K+GV + EI S++RHPN++ + R L+ E+ L + L
Sbjct: 50 SQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL---- 105
Query: 75 KANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK 134
+ + + + ++ + +A L + HE V +HRDIK N+L+ + KI DFG +
Sbjct: 106 QKHGRFDEQRSATFMEELADALHYCHERKV---IHRDIKPENLLMGYKGELKIADFGWSV 162
Query: 135 LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
P + + GT YL PE + G K D++ GVL E + G
Sbjct: 163 HAP---SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 107
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 108 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 164
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 165 EDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 219
Query: 179 EIISGR 184
E+++GR
Sbjct: 220 ELLTGR 225
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 13/170 (7%)
Query: 16 SAESKQGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGAT 74
S K+GV + EI S++RHPN++ + R L+ E+ L + L
Sbjct: 51 SQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL---- 106
Query: 75 KANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK 134
+ + + + ++ + +A L + HE V +HRDIK N+L+ + KI DFG +
Sbjct: 107 QKHGRFDEQRSATFMEELADALHYCHERKV---IHRDIKPENLLMGYKGELKIADFGWSV 163
Query: 135 LFPDNITHITTR-IAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
P + R + GT YL PE + G K D++ GVL E + G
Sbjct: 164 HAPS----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 109
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 110 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 166
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 167 EDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 221
Query: 179 EIISGR 184
E+++GR
Sbjct: 222 ELLTGR 227
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 107
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 108 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 164
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 165 EDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 219
Query: 179 EIISGR 184
E+++GR
Sbjct: 220 ELLTGR 225
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 59 GLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 114
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 115 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 171
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 172 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 226
Query: 179 EIISGR 184
E+++GR
Sbjct: 227 ELLTGR 232
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 19/183 (10%)
Query: 8 RRIAVKPLSAES---KQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
+ +A+K ++ E+ K+G E EI L ++HPN+V L G L+ + V
Sbjct: 44 KLVAIKCIAKEALEGKEGSME--NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG 101
Query: 65 SL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNIL---LD 120
L DR++ S + + + +LH+ IVHRD+K N+L LD
Sbjct: 102 ELFDRIVEKGFYTE-----RDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLD 153
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
++ I DFGL+K+ ++ + + GT GY+APE + + D +S GV+ +
Sbjct: 154 EDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL 211
Query: 181 ISG 183
+ G
Sbjct: 212 LCG 214
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 102
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 103 YLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 159
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 160 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 179 EIISGR 184
E+++GR
Sbjct: 215 ELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ E +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDV 102
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 103 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 159
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 160 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 179 EIISGR 184
E+++GR
Sbjct: 215 ELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ E +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDV 102
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 103 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 159
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 160 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 179 EIISGR 184
E+++GR
Sbjct: 215 ELLTGR 220
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 109
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 110 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 166
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 167 EDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 221
Query: 179 EIISGR 184
E+++GR
Sbjct: 222 ELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 102
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 103 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 159
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 160 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 179 EIISGR 184
E+++GR
Sbjct: 215 ELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 58 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 113
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 114 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 170
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 171 EDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 225
Query: 179 EIISGR 184
E+++GR
Sbjct: 226 ELLTGR 231
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 102
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 103 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 159
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 160 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 179 EIISGR 184
E+++GR
Sbjct: 215 ELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 102
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 103 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 159
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 160 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 179 EIISGR 184
E+++GR
Sbjct: 215 ELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 109
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 110 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 166
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 167 EDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 221
Query: 179 EIISGR 184
E+++GR
Sbjct: 222 ELLTGR 227
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 18/178 (10%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DR 68
IA K L E K+G E EI L ++HPN+V L G L+ + V L DR
Sbjct: 51 IAKKAL--EGKEGSME--NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDR 106
Query: 69 VLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNIL---LDQEFNP 125
++ S + + + +LH+ IVHRD+K N+L LD++
Sbjct: 107 IVEKGFYTE-----RDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKI 158
Query: 126 KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
I DFGL+K+ ++ + + GT GY+APE + + D +S GV+ ++ G
Sbjct: 159 MISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 15/168 (8%)
Query: 19 SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANI 78
K+ VR+ EI T+S +RHP LV L +++YE++ L +
Sbjct: 197 DKETVRK---EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL---FEKVADEHN 250
Query: 79 KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP--KIGDFGL-AKL 135
K++ ++ + + KGL +HE + VH D+K NI+ + + K+ DFGL A L
Sbjct: 251 KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 307
Query: 136 FPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
P +TT GT + APE G + D++S GVL ++SG
Sbjct: 308 DPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 109
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 110 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 166
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 167 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 221
Query: 179 EIISGR 184
E+++GR
Sbjct: 222 ELLTGR 227
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 108
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 109 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 165
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 166 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 179 EIISGR 184
E+++GR
Sbjct: 221 ELLTGR 226
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 19/183 (10%)
Query: 8 RRIAVKPLSAES---KQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
+ +A+K ++ E+ K+G E EI L ++HPN+V L G L+ + V
Sbjct: 44 KLVAIKCIAKEALEGKEGSME--NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG 101
Query: 65 SL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNIL---LD 120
L DR++ S + + + +LH+ IVHRD+K N+L LD
Sbjct: 102 ELFDRIVEKGFYTE-----RDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLD 153
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
++ I DFGL+K+ ++ + + GT GY+APE + + D +S GV+ +
Sbjct: 154 EDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL 211
Query: 181 ISG 183
+ G
Sbjct: 212 LCG 214
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 104
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 105 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 161
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 162 EDSELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 216
Query: 179 EIISGR 184
E+++GR
Sbjct: 217 ELLTGR 222
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 87/190 (45%), Gaps = 18/190 (9%)
Query: 7 GRRIAVKPLSAE---SKQGVREFITEIMTLSNVR-HPNLVELIGCCVQGTRRIL-VYEYV 61
G AVK L + V +TE LS R HP L +L CC Q R+ V E+V
Sbjct: 48 GDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLF-CCFQTPDRLFFVMEFV 106
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
L + + + + + + I L FLH++ I++RD+K N+LLD
Sbjct: 107 NGGDL----MFHIQKSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDH 159
Query: 122 EFNPKIGDFGLAKLFPDNITH--ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLE 179
E + K+ DFG+ K + I + T GT Y+APE + D ++ GVL+ E
Sbjct: 160 EGHCKLADFGMCK---EGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYE 216
Query: 180 IISGRNSGKA 189
++ G +A
Sbjct: 217 MLCGHAPFEA 226
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 107
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 108 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 164
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 165 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 219
Query: 179 EIISGR 184
E+++GR
Sbjct: 220 ELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 46 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 101
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 102 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 158
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 159 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 213
Query: 179 EIISGR 184
E+++GR
Sbjct: 214 ELLTGR 219
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 107
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 108 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 164
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 165 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 219
Query: 179 EIISGR 184
E+++GR
Sbjct: 220 ELLTGR 225
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 108
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 109 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 165
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 166 EDSELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 179 EIISGR 184
E+++GR
Sbjct: 221 ELLTGR 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 104
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 105 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 161
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 162 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 216
Query: 179 EIISGR 184
E+++GR
Sbjct: 217 ELLTGR 222
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 108
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 109 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 165
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 166 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 179 EIISGR 184
E+++GR
Sbjct: 221 ELLTGR 226
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 59 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 114
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 115 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 171
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 172 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 226
Query: 179 EIISGR 184
E+++GR
Sbjct: 227 ELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 59 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 114
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 115 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 171
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 172 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 226
Query: 179 EIISGR 184
E+++GR
Sbjct: 227 ELLTGR 232
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ E +
Sbjct: 70 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDV 125
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 126 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 182
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 183 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 237
Query: 179 EIISGR 184
E+++GR
Sbjct: 238 ELLTGR 243
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 43 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 98
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 99 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVN 155
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 156 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 210
Query: 179 EIISGR 184
E+++GR
Sbjct: 211 ELLTGR 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 44 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 99
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 100 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVN 156
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 157 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 211
Query: 179 EIISGR 184
E+++GR
Sbjct: 212 ELLTGR 217
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 24/188 (12%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 102
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 103 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 159
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAG---TTGYLAPEYVLGG-QLTMKADVYSFGVL 176
++ KI DFGLA+ H +AG T Y APE +L D++S G +
Sbjct: 160 EDCELKILDFGLAR-------HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 177 VLEIISGR 184
+ E+++GR
Sbjct: 213 MAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 102
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 103 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 159
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 160 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 179 EIISGR 184
E+++GR
Sbjct: 215 ELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 104
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 105 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 161
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 162 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 216
Query: 179 EIISGR 184
E+++GR
Sbjct: 217 ELLTGR 222
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 44 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 99
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 100 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVN 156
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 157 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 211
Query: 179 EIISGR 184
E+++GR
Sbjct: 212 ELLTGR 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 102
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 103 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVN 159
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 160 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 179 EIISGR 184
E+++GR
Sbjct: 215 ELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 104
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 105 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 161
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 162 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 216
Query: 179 EIISGR 184
E+++GR
Sbjct: 217 ELLTGR 222
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 58 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 113
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 114 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 170
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 171 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 225
Query: 179 EIISGR 184
E+++GR
Sbjct: 226 ELLTGR 231
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 67 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 122
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 123 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 179
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 180 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 234
Query: 179 EIISGR 184
E+++GR
Sbjct: 235 ELLTGR 240
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSD 87
EI + + H N+V+ G +G + L EY L DR+ + +I +
Sbjct: 55 EICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQR 109
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTR 146
+ G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + +
Sbjct: 110 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 147 IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
+ GT Y+APE + + + DV+S G+++ +++G
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 39 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 98
P L +L C R V EYV L + + K + I+ GL F
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDL----MYHIQQVGKFKEPQAVFYAAEISIGLFF 135
Query: 99 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR-IAGTTGYLAPE 157
LH+ I++RD+K N++LD E + KI DFG+ K + +TTR GT Y+APE
Sbjct: 136 LHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPDYIAPE 190
Query: 158 YVLGGQLTMKADVYSFGVLVLEIISGR 184
+ D +++GVL+ E+++G+
Sbjct: 191 IIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 18/209 (8%)
Query: 23 VREFITEIMTLSNVRHPNLVELIGCCV--QGTRRI---LVYEYVENNSLDRVLLGATKAN 77
VRE + + L HPN+V L+ C + R I LV+E+V+ + L L A
Sbjct: 59 VRE-VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPG 116
Query: 78 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 137
L E D+ +GL FLH IVHRD+K NIL+ K+ DFGLA+++
Sbjct: 117 --LPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY- 170
Query: 138 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRN--SGKAMWGQMN 195
+ T + T Y APE +L D++S G + E+ + G + Q+
Sbjct: 171 -SYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG 229
Query: 196 KFLLEWAWQLHQEEKPLELVDPELGEYPP 224
K + + +++ P ++ P G +PP
Sbjct: 230 K-IFDLIGLPPEDDWPRDVSLPR-GAFPP 256
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 45 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 100
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 101 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVN 157
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 158 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 212
Query: 179 EIISGR 184
E+++GR
Sbjct: 213 ELLTGR 218
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 24/188 (12%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 102
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 103 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 159
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAG---TTGYLAPEYVLGG-QLTMKADVYSFGVL 176
++ KI DFGLA+ H +AG T Y APE +L D++S G +
Sbjct: 160 EDCELKILDFGLAR-------HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 177 VLEIISGR 184
+ E+++GR
Sbjct: 213 MAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 66 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 121
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 122 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 178
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 179 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 233
Query: 179 EIISGR 184
E+++GR
Sbjct: 234 ELLTGR 239
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 4/158 (2%)
Query: 25 EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEK 84
+ I EI L + HPN+++ ++ +V E + L R++ K +
Sbjct: 78 DCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERT 137
Query: 85 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 144
V + L +H ++HRDIK +N+ + K+GD GL + F T
Sbjct: 138 VWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAH 194
Query: 145 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
+ + GT Y++PE + K+D++S G L+ E+ +
Sbjct: 195 S-LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA 231
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 24/188 (12%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ E +
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDV 98
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 99 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVN 155
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAG---TTGYLAPEYVLGG-QLTMKADVYSFGVL 176
++ KI DFGLA+ H +AG T Y APE +L D++S G +
Sbjct: 156 EDCELKILDFGLAR-------HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 208
Query: 177 VLEIISGR 184
+ E+++GR
Sbjct: 209 MAELLTGR 216
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 91/171 (53%), Gaps = 18/171 (10%)
Query: 17 AESKQGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL----L 71
+E+K G+ R + EI L + HPN++ L+ + LV++++E + L+ ++ L
Sbjct: 49 SEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETD-LEVIIKDNSL 107
Query: 72 GATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFG 131
T ++IK + +GL +LH+ I+HRD+K +N+LLD+ K+ DFG
Sbjct: 108 VLTPSHIKA-------YMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFG 157
Query: 132 LAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT-MKADVYSFGVLVLEII 181
LAK F ++ T Y APE + G ++ + D+++ G ++ E++
Sbjct: 158 LAKSFGSPNRAYXHQVV-TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSD 87
EI + H N+V+ G +G + L EY L DR+ + +I +
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQR 109
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTR 146
+ G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + +
Sbjct: 110 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 147 IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
+ GT Y+APE + + + DV+S G+++ +++G
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSD 87
EI + H N+V+ G +G + L EY L DR+ + +I +
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQR 109
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTR 146
+ G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + +
Sbjct: 110 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 147 IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
+ GT Y+APE + + + DV+S G+++ +++G
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSD 87
EI + H N+V+ G +G + L EY L DR+ + +I +
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQR 109
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTR 146
+ G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + +
Sbjct: 110 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 147 IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
+ GT Y+APE + + + DV+S G+++ +++G
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSD 87
EI + H N+V+ G +G + L EY L DR+ + +I +
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQR 108
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTR 146
+ G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + +
Sbjct: 109 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 147 IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
+ GT Y+APE + + + DV+S G+++ +++G
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSD 87
EI + H N+V+ G +G + L EY L DR+ + +I +
Sbjct: 53 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQR 107
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTR 146
+ G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + +
Sbjct: 108 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 164
Query: 147 IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
+ GT Y+APE + + + DV+S G+++ +++G
Sbjct: 165 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 90/185 (48%), Gaps = 18/185 (9%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 102
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 103 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVN 159
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLE 179
++ KI DFGLA+ D + T T Y APE +L D++S G ++ E
Sbjct: 160 EDCELKILDFGLARHTDDEM----TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 180 IISGR 184
+++GR
Sbjct: 216 LLTGR 220
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 22/196 (11%)
Query: 3 TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVR-HPNLVELIGCCVQGTRRILVYEYV 61
+L NG+ AVK + ++ E+ TL + + N++ELI TR LV+E +
Sbjct: 34 SLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKL 93
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD- 120
+ S+ L + N + S + +A L FLH I HRD+K NIL +
Sbjct: 94 QGGSI----LAHIQKQKHFNEREASRVVRDVAAALDFLH---TKGIAHRDLKPENILCES 146
Query: 121 -QEFNP-KIGDFGLAK--LFPDNITHIT----TRIAGTTGYLAPEY--VLGGQLTM---K 167
++ +P KI DF L ++ T IT T G+ Y+APE V Q T +
Sbjct: 147 PEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKR 206
Query: 168 ADVYSFGVLVLEIISG 183
D++S GV++ ++SG
Sbjct: 207 CDLWSLGVVLYIMLSG 222
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSD 87
EI + H N+V+ G +G + L EY L DR+ + +I +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQR 108
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTR 146
+ G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + +
Sbjct: 109 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 147 IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
+ GT Y+APE + + + DV+S G+++ +++G
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSD 87
EI + H N+V+ G +G + L EY L DR+ + +I +
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQR 109
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTR 146
+ G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + +
Sbjct: 110 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 147 IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
+ GT Y+APE + + + DV+S G+++ +++G
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSD 87
EI + H N+V+ G +G + L EY L DR+ + +I +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQR 108
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTR 146
+ G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + +
Sbjct: 109 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 147 IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
+ GT Y+APE + + + DV+S G+++ +++G
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSD 87
EI + H N+V+ G +G + L EY L DR+ + +I +
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQR 109
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTR 146
+ G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + +
Sbjct: 110 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 147 IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
+ GT Y+APE + + + DV+S G+++ +++G
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSD 87
EI + H N+V+ G +G + L EY L DR+ + +I +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQR 108
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTR 146
+ G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + +
Sbjct: 109 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 147 IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
+ GT Y+APE + + + DV+S G+++ +++G
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSD 87
EI + H N+V+ G +G + L EY L DR+ + +I +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQR 108
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTR 146
+ G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + +
Sbjct: 109 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 147 IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
+ GT Y+APE + + + DV+S G+++ +++G
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSD 87
EI + H N+V+ G +G + L EY L DR+ + +I +
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQR 108
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTR 146
+ G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + +
Sbjct: 109 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 147 IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
+ GT Y+APE + + + DV+S G+++ +++G
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 12/178 (6%)
Query: 10 IAVKPLSAESKQGVREFIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-D 67
+AVK + + E I EI + H N+V+ G +G + L EY L D
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 68 RVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKI 127
R+ + +I + + G+ +LH I HRDIK N+LLD+ N KI
Sbjct: 95 RI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKI 146
Query: 128 GDFGLAKLFP-DNITHITTRIAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
DFGLA +F +N + ++ GT Y+APE + + + DV+S G+++ +++G
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSD 87
EI + H N+V+ G +G + L EY L DR+ + +I +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQR 108
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTR 146
+ G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + +
Sbjct: 109 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 147 IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
+ GT Y+APE + + + DV+S G+++ +++G
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSD 87
EI + H N+V+ G +G + L EY L DR+ + +I +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQR 108
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTR 146
+ G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + +
Sbjct: 109 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 147 IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
+ GT Y+APE + + + DV+S G+++ +++G
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSD 87
EI + H N+V+ G +G + L EY L DR+ + +I +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQR 108
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTR 146
+ G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + +
Sbjct: 109 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 147 IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
+ GT Y+APE + + + DV+S G+++ +++G
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSD 87
EI + H N+V+ G +G + L EY L DR+ + +I +
Sbjct: 55 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQR 109
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTR 146
+ G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + +
Sbjct: 110 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 147 IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
+ GT Y+APE + + + DV+S G+++ +++G
Sbjct: 167 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSD 87
EI + H N+V+ G +G + L EY L DR+ + +I +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQR 108
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTR 146
+ G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + +
Sbjct: 109 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 147 IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
+ GT Y+APE + + + DV+S G+++ +++G
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSD 87
EI + H N+V+ G +G + L EY L DR+ + +I +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQR 108
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTR 146
+ G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + +
Sbjct: 109 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 147 IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
+ GT Y+APE + + + DV+S G+++ +++G
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 8/151 (5%)
Query: 33 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 92
L++V HP +V+L + L+ +++ L + E +
Sbjct: 84 LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAEL 139
Query: 93 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 152
A GL LH I++RD+K NILLD+E + K+ DFGL+K D+ + GT
Sbjct: 140 ALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS-FCGTVE 195
Query: 153 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
Y+APE V + AD +S+GVL+ E+++G
Sbjct: 196 YMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 37/205 (18%)
Query: 7 GRRIAVKPL--SAESKQGVREFITEIMTLSNVR-HPNLVELIGCCVQGTRR--ILVYEYV 61
G +AVK + + ++ + EIM L+ + H N+V L+ R LV++Y+
Sbjct: 34 GEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
E + L +ANI L + + + K + +LH ++HRD+K SNILL+
Sbjct: 94 ETD-----LHAVIRANI-LEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNA 144
Query: 122 EFNPKIGDFGLAKLFPDNITHITTRI---------------------AGTTGYLAPEYVL 160
E + K+ DFGL++ F NI +T I T Y APE +L
Sbjct: 145 ECHVKVADFGLSRSFV-NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILL 203
Query: 161 GG-QLTMKADVYSFGVLVLEIISGR 184
G + T D++S G ++ EI+ G+
Sbjct: 204 GSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 12/168 (7%)
Query: 20 KQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK 79
+ VR E+ + + HP LV L +V + + L L + N+
Sbjct: 56 RNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL----QQNVH 111
Query: 80 LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN 139
E + L +L + I+HRD+K NILLD+ + I DF +A + P
Sbjct: 112 FKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168
Query: 140 ITHITTRIAGTTGYLAPEYVL---GGQLTMKADVYSFGVLVLEIISGR 184
T ITT +AGT Y+APE G + D +S GV E++ GR
Sbjct: 169 -TQITT-MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 102
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 103 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 159
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI D+GLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 160 EDCELKILDYGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 179 EIISGR 184
E+++GR
Sbjct: 215 ELLTGR 220
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSD 87
EI + H N+V+ G +G + L EY L DR+ + +I +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQR 108
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTR 146
+ G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + +
Sbjct: 109 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 147 IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
+ GT Y+APE + + + DV+S G+++ +++G
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 97/206 (47%), Gaps = 29/206 (14%)
Query: 6 NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY--- 60
+G ++A+K LS +S+ + E++ L +++H N++ L+ + Y++
Sbjct: 48 SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 107
Query: 61 --VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNIL 118
L +++ +K + EK + + KGL ++H +VHRD+K N+
Sbjct: 108 MPFMQTDLQKIM------GLKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLA 158
Query: 119 LDQEFNPKIGDFGLAKLFPDNITHITTRIAG---TTGYLAPEYVLGG-QLTMKADVYSFG 174
++++ KI DFGLA+ H + G T Y APE +L D++S G
Sbjct: 159 VNEDCELKILDFGLAR-------HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVG 211
Query: 175 VLVLEIISGRN--SGKAMWGQMNKFL 198
++ E+++G+ GK Q+ + L
Sbjct: 212 CIMAEMLTGKTLFKGKDYLDQLTQIL 237
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 33 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 92
L V HP +V+L + L+ +++ L + E +
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAEL 135
Query: 93 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH--ITTRIAGT 150
A L LH I++RD+K NILLD+E + K+ DFGL+K ++I H GT
Sbjct: 136 ALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGT 189
Query: 151 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
Y+APE V T AD +SFGVL+ E+++G
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 28 TEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRS 86
TEI L + HPN+++L T LV E V L DR++ + +
Sbjct: 97 TEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSE-----RDAA 151
Query: 87 DICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ---EFNPKIGDFGLAKLFPDNITHI 143
D I + +A+LHE IVHRD+K N+L + KI DFGL+K+ +
Sbjct: 152 DAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208
Query: 144 TTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
T + GT GY APE + G + D++S G++ ++ G
Sbjct: 209 T--VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 33 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 92
L V HP +V+L + L+ +++ L + E +
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAEL 135
Query: 93 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH--ITTRIAGT 150
A L LH I++RD+K NILLD+E + K+ DFGL+K ++I H GT
Sbjct: 136 ALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGT 189
Query: 151 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
Y+APE V T AD +SFGVL+ E+++G
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 19/188 (10%)
Query: 4 LTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVY 58
L R A+K L E + ++E ++T E +S + HP V+L C +
Sbjct: 59 LATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGL 116
Query: 59 EYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
Y +N L + + +G+ + I L +LH + I+HRD+K N
Sbjct: 117 SYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLHGK---GIIHRDLKPEN 167
Query: 117 ILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGV 175
ILL+++ + +I DFG AK L P++ GT Y++PE + +D+++ G
Sbjct: 168 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 227
Query: 176 LVLEIISG 183
++ ++++G
Sbjct: 228 IIYQLVAG 235
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 12/187 (6%)
Query: 11 AVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
+KP + + +FI E+ + ++ H NL+ L G + +++ + LDR
Sbjct: 47 CLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR-- 104
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDF 130
L + + L S V +A+G+ +L + +HRD+ A N+LL KIGDF
Sbjct: 105 LRKHQGHFLLG--TLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDF 159
Query: 131 GLAKLFPDNITHITTRIAGTT--GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGK 188
GL + P N H + + APE + + +D + FGV + E+ + G+
Sbjct: 160 GLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQ 216
Query: 189 AMWGQMN 195
W +N
Sbjct: 217 EPWIGLN 223
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 33 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 92
L V HP +V+L + L+ +++ L L + E +
Sbjct: 81 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEEDVKFYLAEL 136
Query: 93 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH--ITTRIAGT 150
A L LH I++RD+K NILLD+E + K+ DFGL+K ++I H GT
Sbjct: 137 ALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGT 190
Query: 151 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
Y+APE V T AD +SFGVL+ E+++G
Sbjct: 191 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 12/187 (6%)
Query: 11 AVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
+KP + + +FI E+ + ++ H NL+ L G + +++ + LDR
Sbjct: 43 CLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR-- 100
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDF 130
L + + L S V +A+G+ +L + +HRD+ A N+LL KIGDF
Sbjct: 101 LRKHQGHFLLG--TLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDF 155
Query: 131 GLAKLFPDNITHITTRIAGTT--GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGK 188
GL + P N H + + APE + + +D + FGV + E+ + G+
Sbjct: 156 GLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQ 212
Query: 189 AMWGQMN 195
W +N
Sbjct: 213 EPWIGLN 219
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 12/187 (6%)
Query: 11 AVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
+KP + + +FI E+ + ++ H NL+ L G + +++ + LDR
Sbjct: 43 CLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR-- 100
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDF 130
L + + L S V +A+G+ +L + +HRD+ A N+LL KIGDF
Sbjct: 101 LRKHQGHFLLG--TLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDF 155
Query: 131 GLAKLFPDNITHITTRIAGTT--GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGK 188
GL + P N H + + APE + + +D + FGV + E+ + G+
Sbjct: 156 GLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQ 212
Query: 189 AMWGQMN 195
W +N
Sbjct: 213 EPWIGLN 219
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 12/187 (6%)
Query: 11 AVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
+KP + + +FI E+ + ++ H NL+ L G + +++ + LDR
Sbjct: 43 CLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR-- 100
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDF 130
L + + L S V +A+G+ +L + +HRD+ A N+LL KIGDF
Sbjct: 101 LRKHQGHFLLG--TLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDF 155
Query: 131 GLAKLFPDNITHITTRIAGTT--GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGK 188
GL + P N H + + APE + + +D + FGV + E+ + G+
Sbjct: 156 GLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQ 212
Query: 189 AMWGQMN 195
W +N
Sbjct: 213 EPWIGLN 219
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 102
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 103 YLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 159
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGL + D +T ++ TR Y APE +L D++S G ++
Sbjct: 160 EDSELKILDFGLCRHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 179 EIISGR 184
E+++GR
Sbjct: 215 ELLTGR 220
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVEN 63
G +AVK LS +++ + E++ L V H N++ L+ Q T Y+
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+D L +++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 109 ELMDANLCQVI--HMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDC 163
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
KI DFGLA+ N + T T Y APE +LG D++S G ++ E++ G
Sbjct: 164 TLKILDFGLARTACTNF--MMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 12/187 (6%)
Query: 11 AVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
+KP + + +FI E+ + ++ H NL+ L G + +++ + LDR
Sbjct: 47 CLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR-- 104
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDF 130
L + + L S V +A+G+ +L + +HRD+ A N+LL KIGDF
Sbjct: 105 LRKHQGHFLLG--TLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDF 159
Query: 131 GLAKLFPDNITHITTRIAGTT--GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGK 188
GL + P N H + + APE + + +D + FGV + E+ + G+
Sbjct: 160 GLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQ 216
Query: 189 AMWGQMN 195
W +N
Sbjct: 217 EPWIGLN 223
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 12/187 (6%)
Query: 11 AVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
+KP + + +FI E+ + ++ H NL+ L G + +++ + LDR
Sbjct: 53 CLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR-- 110
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDF 130
L + + L S V +A+G+ +L + +HRD+ A N+LL KIGDF
Sbjct: 111 LRKHQGHFLLG--TLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDF 165
Query: 131 GLAKLFPDNITHITTRIAGTT--GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGK 188
GL + P N H + + APE + + +D + FGV + E+ + G+
Sbjct: 166 GLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQ 222
Query: 189 AMWGQMN 195
W +N
Sbjct: 223 EPWIGLN 229
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 12/187 (6%)
Query: 11 AVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
+KP + + +FI E+ + ++ H NL+ L G + +++ + LDR
Sbjct: 53 CLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR-- 110
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDF 130
L + + L R V +A+G+ +L + +HRD+ A N+LL KIGDF
Sbjct: 111 LRKHQGHFLLGTLSR--YAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDF 165
Query: 131 GLAKLFPDNITHITTRIAGTT--GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGK 188
GL + P N H + + APE + + +D + FGV + E+ + G+
Sbjct: 166 GLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQ 222
Query: 189 AMWGQMN 195
W +N
Sbjct: 223 EPWIGLN 229
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 15/180 (8%)
Query: 8 RRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL- 66
R I + ++ S + + E+ L + HPN+++L LV E + L
Sbjct: 65 RAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELF 124
Query: 67 DRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP- 125
D ++ +K N + I + G+ +LH+ +IVHRD+K N+LL+ +
Sbjct: 125 DEII-----HRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDA 176
Query: 126 --KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
KI DFGL+ +F +N + R+ GT Y+APE VL + K DV+S GV++ +++G
Sbjct: 177 LIKIVDFGLSAVF-ENQKKMKERL-GTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 18/185 (9%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ E +
Sbjct: 67 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDV 122
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 123 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 179
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLE 179
++ KI DFGLA+ D + T Y APE +L D++S G ++ E
Sbjct: 180 EDCELKILDFGLARHTDDEM----XGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 235
Query: 180 IISGR 184
+++GR
Sbjct: 236 LLTGR 240
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 23 VREFITEIMTLSNVRHPNLVELIGCCV--QGTRRI---LVYEYVENNSLDRVLLGATKAN 77
VRE + + L HPN+V L+ C + R I LV+E+V+ + L L A
Sbjct: 51 VRE-VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPG 108
Query: 78 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 137
L E D+ +GL FLH IVHRD+K NIL+ K+ DFGLA+++
Sbjct: 109 --LPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
Query: 138 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 181
+ + T Y APE +L D++S G + E+
Sbjct: 164 YQMALFPVVV--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 102
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 103 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 159
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DF LA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 160 EDCELKILDFYLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 179 EIISGR 184
E+++GR
Sbjct: 215 ELLTGR 220
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 23 VREFITEIMTLSNVRHPNLVELIGCCV--QGTRRI---LVYEYVENNSLDRVLLGATKAN 77
VRE + + L HPN+V L+ C + R I LV+E+V+ + L L A
Sbjct: 51 VRE-VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPG 108
Query: 78 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 137
L E D+ +GL FLH IVHRD+K NIL+ K+ DFGLA+++
Sbjct: 109 --LPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY- 162
Query: 138 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 181
+ + T Y APE +L D++S G + E+
Sbjct: 163 -SYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 92/199 (46%), Gaps = 32/199 (16%)
Query: 4 LTNGRRIAVKPLSAESKQG-VREFITEIMTLSNVRHPNLVELIGCCV----QGTRRILVY 58
L +G +AVK S+ +Q RE TEI +RH N++ I + T+ L+
Sbjct: 28 LWHGESVAVKIFSSRDEQSWFRE--TEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLIT 85
Query: 59 EYVENNSLDRVLLGAT-KANIKLNWEKRSDICVGIAKGLAFLHEELV-----PHIVHRDI 112
Y E+ SL L T + ++ L + V A GLA LH E+ P I HRD
Sbjct: 86 HYHEHGSLYDFLQRQTLEPHLALR------LAVSAACGLAHLHVEIFGTQGKPAIAHRDF 139
Query: 113 KASNILLDQEFNPKIGDFGLAKLFPDNITHI----TTRIAGTTGYLAPEYVLGGQLTMKA 168
K+ N+L+ I D GLA + ++ R+ GT Y+APE VL Q+
Sbjct: 140 KSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTKRYMAPE-VLDEQIRTDC 197
Query: 169 -------DVYSFGVLVLEI 180
D+++FG+++ EI
Sbjct: 198 FESYKWTDIWAFGLVLWEI 216
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVEN 63
G +AVK LS +++ + E++ L V H N++ L+ Q T Y+
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 106
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
+D L +++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 107 ELMDANLCQVI--HMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDC 161
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
KI DFGLA+ N + T T Y APE +LG D++S G ++ E++ G
Sbjct: 162 TLKILDFGLARTASTNF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 70 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 125
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 126 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 182
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI DFGLA+ D + ++ TR Y APE +L D++S G ++
Sbjct: 183 EDCELKILDFGLARHTDDEMXGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 237
Query: 179 EIISGR 184
E+++GR
Sbjct: 238 ELLTGR 243
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 23 VREFITEIMTLSNVRHPNLVELIGCCV--QGTRRI---LVYEYVENNSLDRVLLGATKAN 77
VRE + + L HPN+V L+ C + R I LV+E+V+ + L L A
Sbjct: 51 VRE-VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPG 108
Query: 78 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 137
L E D+ +GL FLH IVHRD+K NIL+ K+ DFGLA+++
Sbjct: 109 --LPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY- 162
Query: 138 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 181
+ + T Y APE +L D++S G + E+
Sbjct: 163 -SYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 67/128 (52%), Gaps = 14/128 (10%)
Query: 90 VGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG 149
V I K L +L E+ ++HRD+K SNILLD+ K+ DFG++ D+ R AG
Sbjct: 131 VAIVKALYYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD--KAKDRSAG 186
Query: 150 TTGYLAPEYVLGGQLT-----MKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQ 204
Y+APE + T ++ADV+S G+ ++E+ +G+ K K E +
Sbjct: 187 CAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNC-----KTDFEVLTK 241
Query: 205 LHQEEKPL 212
+ QEE PL
Sbjct: 242 VLQEEPPL 249
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 16/150 (10%)
Query: 39 PNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGL 96
P L +L C R V EYV L + +G K + + IA GL
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY------AAEIAIGL 134
Query: 97 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI-THITTR-IAGTTGYL 154
FL + I++RD+K N++LD E + KI DFG+ K +NI +TT+ GT Y+
Sbjct: 135 FFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYI 188
Query: 155 APEYVLGGQLTMKADVYSFGVLVLEIISGR 184
APE + D ++FGVL+ E+++G+
Sbjct: 189 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 13 KPLSAESKQGV--REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
K S S++GV E E+ L V HPN++ L T +L+ E V L L
Sbjct: 47 KRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----K 126
A K + L+ E+ + I G+ +LH I H D+K NI+L + P K
Sbjct: 107 --AQKES--LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
+ DFGLA D + I GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 160 LIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 78/179 (43%), Gaps = 32/179 (17%)
Query: 33 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL------DRVLLGATKANIKLNWEKRS 86
L NV+HP LV L + V +Y+ L +R L E R+
Sbjct: 93 LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFL-----------EPRA 141
Query: 87 DICVG-IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH--I 143
IA L +LH +IV+RD+K NILLD + + + DFGL K +NI H
Sbjct: 142 RFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNST 195
Query: 144 TTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG------RNSGKAMWGQMNK 196
T+ GT YLAPE + D + G ++ E++ G RN+ + +NK
Sbjct: 196 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK 254
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 16/150 (10%)
Query: 39 PNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGL 96
P L +L C R V EYV L + +G K + + IA GL
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY------AAEIAIGL 455
Query: 97 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI-THITTR-IAGTTGYL 154
FL + I++RD+K N++LD E + KI DFG+ K +NI +TT+ GT Y+
Sbjct: 456 FFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYI 509
Query: 155 APEYVLGGQLTMKADVYSFGVLVLEIISGR 184
APE + D ++FGVL+ E+++G+
Sbjct: 510 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 33 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 92
L V+HP +V+LI G + L+ EY+ L + + I + + I
Sbjct: 75 LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFME-DTACFYLAEI 130
Query: 93 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 152
+ L LH++ I++RD+K NI+L+ + + K+ DFGL K + T +T GT
Sbjct: 131 SMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTIE 186
Query: 153 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
Y+APE ++ D +S G L+ ++++G
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 33 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 92
L V+HP +V+LI G + L+ EY+ L + + I + + I
Sbjct: 75 LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFME-DTACFYLAEI 130
Query: 93 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 152
+ L LH++ I++RD+K NI+L+ + + K+ DFGL K + T +T GT
Sbjct: 131 SMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTIE 186
Query: 153 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
Y+APE ++ D +S G L+ ++++G
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 34/197 (17%)
Query: 1 MGTLTNGRRIAVKPLSAE-SKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVY 58
+ T+TN +A+K + E ++GV I E+ L ++H N++EL R L++
Sbjct: 54 IDTVTN-ETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF 112
Query: 59 EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK--------GLAFLHEELVPHIVHR 110
EY EN ++K +K D+ + + K G+ F H +HR
Sbjct: 113 EYAEN-------------DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR---RCLHR 156
Query: 111 DIKASNILL---DQEFNP--KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQ-L 164
D+K N+LL D P KIGDFGLA+ F I T I T Y PE +LG +
Sbjct: 157 DLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TLWYRPPEILLGSRHY 215
Query: 165 TMKADVYSFGVLVLEII 181
+ D++S + E++
Sbjct: 216 STSVDIWSIACIWAEML 232
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 73/168 (43%), Gaps = 18/168 (10%)
Query: 19 SKQGVREFITEIMTLSNVRHPNLVELIGC---CVQGTRRI-LVYEYVENNSLDRVLLGAT 74
+K + F E L ++HPN+V V+G + I LV E + +L L
Sbjct: 65 TKSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFK 124
Query: 75 KANIKL--NWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFG 131
IK+ +W C I KGL FLH P I+HRD+K NI + KIGD G
Sbjct: 125 VXKIKVLRSW------CRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLG 177
Query: 132 LAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLE 179
LA L + GT + APE + DVY+FG LE
Sbjct: 178 LATL---KRASFAKAVIGTPEFXAPE-XYEEKYDESVDVYAFGXCXLE 221
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 29/206 (14%)
Query: 6 NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEY--- 60
+G ++A+K LS +S+ + E++ L +++H N++ L+ + Y++
Sbjct: 66 SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 125
Query: 61 --VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNIL 118
L +++ ++ + EK + + KGL ++H +VHRD+K N+
Sbjct: 126 MPFMQTDLQKIM------GMEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLA 176
Query: 119 LDQEFNPKIGDFGLAKLFPDNITHITTRIAG---TTGYLAPEYVLGG-QLTMKADVYSFG 174
++++ KI DFGLA+ H + G T Y APE +L D++S G
Sbjct: 177 VNEDCELKILDFGLAR-------HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVG 229
Query: 175 VLVLEIISGRN--SGKAMWGQMNKFL 198
++ E+++G+ GK Q+ + L
Sbjct: 230 CIMAEMLTGKTLFKGKDYLDQLTQIL 255
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 88 ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNITH 142
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD +
Sbjct: 201 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 257
Query: 143 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 258 GDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 88 ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNITH 142
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD +
Sbjct: 194 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 250
Query: 143 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 251 GDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 120/276 (43%), Gaps = 42/276 (15%)
Query: 2 GTLTNGR----RIAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVELIGCCVQGTRRIL 56
G TN + +AVK + +E F++E + + N+ HP++V+LIG + I+
Sbjct: 27 GVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWII 86
Query: 57 VY--------EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 108
+ Y+E N +L +++ I K +A+L + V
Sbjct: 87 MELYPYGELGHYLERNKNSLKVLTLVLYSLQ------------ICKAMAYLES---INCV 131
Query: 109 HRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA 168
HRDI NIL+ K+GDFGL++ D + + +++PE + + T +
Sbjct: 132 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTAS 191
Query: 169 DVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEII 228
DV+ F V + EI+S +G+ F LE + EK L P+L PP +
Sbjct: 192 DVWMFAVCMWEILS--------FGKQPFFWLENKDVIGVLEKGDRLPKPDLC--PP---V 238
Query: 229 RYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEE 264
Y + C S RP+ +++ L+ ++ ++
Sbjct: 239 LYTLMT-RCWDYDPSDRPRFTELVCSLSDVYQMEKD 273
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 102
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 103 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 159
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI FGLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 160 EDCELKILGFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 179 EIISGR 184
E+++GR
Sbjct: 215 ELLTGR 220
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 16/226 (7%)
Query: 1 MGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVY 58
M + +G+ +AVK + A S++ R + +++ V P V G + +
Sbjct: 70 MRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129
Query: 59 EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNIL 118
E + + SLD+ + + I V I K L LH +L ++HRD+K SN+L
Sbjct: 130 ELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVL 186
Query: 119 LDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYV---LGGQ-LTMKADVYSFG 174
++ K+ DFG++ D++ T AG Y+APE + L + ++K+D++S G
Sbjct: 187 INALGQVKMCDFGISGYLVDSVAK--TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLG 244
Query: 175 VLVLEIISGRNSGKAMWG----QMNKFLLEWAWQLHQEEKPLELVD 216
+ ++E+ R + WG Q+ + + E + QL ++ E VD
Sbjct: 245 ITMIELAILRFPYDS-WGTPFQQLKQVVEEPSPQLPADKFSAEFVD 289
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 88 ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNITH 142
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD +
Sbjct: 196 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 252
Query: 143 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 253 GDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 120/276 (43%), Gaps = 42/276 (15%)
Query: 2 GTLTNGR----RIAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVELIGCCVQGTRRIL 56
G TN + +AVK + +E F++E + + N+ HP++V+LIG + I+
Sbjct: 43 GVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWII 102
Query: 57 VY--------EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 108
+ Y+E N +L +++ I K +A+L + V
Sbjct: 103 MELYPYGELGHYLERNKNSLKVLTLVLYSLQ------------ICKAMAYLES---INCV 147
Query: 109 HRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA 168
HRDI NIL+ K+GDFGL++ D + + +++PE + + T +
Sbjct: 148 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTAS 207
Query: 169 DVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEII 228
DV+ F V + EI+S +G+ F LE + EK L P+L PP +
Sbjct: 208 DVWMFAVCMWEILS--------FGKQPFFWLENKDVIGVLEKGDRLPKPDLC--PP---V 254
Query: 229 RYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEE 264
Y + C S RP+ +++ L+ ++ ++
Sbjct: 255 LYTLMT-RCWDYDPSDRPRFTELVCSLSDVYQMEKD 289
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 88 ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNITH 142
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD +
Sbjct: 203 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 259
Query: 143 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 260 GDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 92 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNITHITTRIA 148
+A+G+ FL +HRD+ A NILL + KI DFGLA+ PD + TR+
Sbjct: 208 VARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 182
++APE + + K+DV+S+GVL+ EI S
Sbjct: 265 --LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 87/206 (42%), Gaps = 45/206 (21%)
Query: 8 RRIAVKPLSAESKQGVREFITE--IMTLSNVRHPNLVELIGCCVQGTRRI---------L 56
R +AVK S ++Q FI E I + + H N+ I G R+ L
Sbjct: 37 RPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARFI----VGDERVTADGRMEYLL 89
Query: 57 VYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL------VPHIVHR 110
V EY N SL + L T +W + + +GLA+LH EL P I HR
Sbjct: 90 VMEYYPNGSLXKYLSLHTS-----DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHR 144
Query: 111 DIKASNILLDQEFNPKIGDFGLAKLF-------PDNITHITTRIAGTTGYLAPEYVLGGQ 163
D+ + N+L+ + I DFGL+ P + GT Y+APE VL G
Sbjct: 145 DLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPE-VLEGA 203
Query: 164 LTMK--------ADVYSFGVLVLEII 181
+ ++ D+Y+ G++ EI
Sbjct: 204 VNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 120/276 (43%), Gaps = 42/276 (15%)
Query: 2 GTLTNGR----RIAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVELIGCCVQGTRRIL 56
G TN + +AVK + +E F++E + + N+ HP++V+LIG + I+
Sbjct: 31 GVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWII 90
Query: 57 VY--------EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 108
+ Y+E N +L +++ I K +A+L + V
Sbjct: 91 MELYPYGELGHYLERNKNSLKVLTLVLYSLQ------------ICKAMAYLES---INCV 135
Query: 109 HRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA 168
HRDI NIL+ K+GDFGL++ D + + +++PE + + T +
Sbjct: 136 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTAS 195
Query: 169 DVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEII 228
DV+ F V + EI+S +G+ F LE + EK L P+L PP +
Sbjct: 196 DVWMFAVCMWEILS--------FGKQPFFWLENKDVIGVLEKGDRLPKPDLC--PP---V 242
Query: 229 RYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEE 264
Y + C S RP+ +++ L+ ++ ++
Sbjct: 243 LYTLMT-RCWDYDPSDRPRFTELVCSLSDVYQMEKD 277
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 102
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 103 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 159
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI D GLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 160 EDCELKILDAGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 179 EIISGR 184
E+++GR
Sbjct: 215 ELLTGR 220
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 18/183 (9%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC-----CVQGTRRILVYEY 60
R +A+K LS +++ + E++ + V H N++ L+ ++ + + +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ + +L +V+ ++L+ E+ S + + G+ LH I+HRD+K SNI++
Sbjct: 110 LMDANLSQVI------QMELDHERMSYLLYQMLVGIKHLHSA---GIIHRDLKPSNIVVK 160
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ KI DFGLA+ + + T T Y APE +LG D++S GV++ E+
Sbjct: 161 SDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEM 218
Query: 181 ISG 183
I G
Sbjct: 219 IKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 18/183 (9%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC-----CVQGTRRILVYEY 60
R +A+K LS +++ + E++ + V H N++ L+ ++ + + +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ + +L +V+ ++L+ E+ S + + G+ LH I+HRD+K SNI++
Sbjct: 110 LMDANLSQVI------QMELDHERMSYLLYQMLVGIKHLHSA---GIIHRDLKPSNIVVK 160
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ KI DFGLA+ + + T T Y APE +LG D++S GV++ E+
Sbjct: 161 SDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEM 218
Query: 181 ISG 183
I G
Sbjct: 219 IKG 221
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 102
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 103 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 159
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI D GLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 160 EDCELKILDRGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 179 EIISGR 184
E+++GR
Sbjct: 215 ELLTGR 220
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 18/187 (9%)
Query: 9 RIAVKPLSAE--SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRR------ILVYEY 60
++AVK L A+ + + EF+ E + HP++ +L+G ++ + +++ +
Sbjct: 53 KVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPF 112
Query: 61 VENNSLDRVLL----GATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
+++ L LL G N+ L R V IA G+ +L + +HRD+ A N
Sbjct: 113 MKHGDLHAFLLASRIGENPFNLPLQTLVR--FMVDIACGMEYLSSR---NFIHRDLAARN 167
Query: 117 ILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGV 175
+L ++ + DFGL+ K++ + +LA E + T+ +DV++FGV
Sbjct: 168 CMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGV 227
Query: 176 LVLEIIS 182
+ EI++
Sbjct: 228 TMWEIMT 234
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 18/185 (9%)
Query: 6 NGRRIAVKPLS---AESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYE-YV 61
G+ AVK +S + K + E+ L + HPN+++L LV E Y
Sbjct: 56 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYT 115
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD- 120
D ++ + + + + I + G+ ++H+ IVHRD+K N+LL+
Sbjct: 116 GGELFDEII-----SRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLES 167
Query: 121 --QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVL 178
++ N +I DFGL+ F + + +I GT Y+APE VL G K DV+S GV++
Sbjct: 168 KSKDANIRIIDFGLSTHFEAS-KKMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILY 224
Query: 179 EIISG 183
++SG
Sbjct: 225 ILLSG 229
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 30/195 (15%)
Query: 7 GRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCV----QGTRRILVYEYV 61
G +AVK S+ + K RE TE+ +RH N++ I + T+ L+ Y
Sbjct: 31 GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYH 88
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV-----PHIVHRDIKASN 116
E SL L T + I + IA GLA LH E+ P I HRD+K+ N
Sbjct: 89 EMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKN 143
Query: 117 ILLDQEFNPKIGDFGLAKLFPDNITHITT----RIAGTTGYLAPEYVLGGQLTM------ 166
IL+ + I D GLA + + + R+ GT Y+APE VL + +
Sbjct: 144 ILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAPE-VLDETIQVDCFDSY 201
Query: 167 -KADVYSFGVLVLEI 180
+ D+++FG+++ E+
Sbjct: 202 KRVDIWAFGLVLWEV 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 30/195 (15%)
Query: 7 GRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCV----QGTRRILVYEYV 61
G +AVK S+ + K RE TE+ +RH N++ I + T+ L+ Y
Sbjct: 31 GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYH 88
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV-----PHIVHRDIKASN 116
E SL L T + I + IA GLA LH E+ P I HRD+K+ N
Sbjct: 89 EMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKN 143
Query: 117 ILLDQEFNPKIGDFGLAKLFPDNITHITT----RIAGTTGYLAPEYVLGGQLTM------ 166
IL+ + I D GLA + + + R+ GT Y+APE VL + +
Sbjct: 144 ILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAPE-VLDETIQVDCFDSY 201
Query: 167 -KADVYSFGVLVLEI 180
+ D+++FG+++ E+
Sbjct: 202 KRVDIWAFGLVLWEV 216
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 107/226 (47%), Gaps = 16/226 (7%)
Query: 1 MGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVY 58
M + +G+ +AVK + A S++ R + +++ V P V G + +
Sbjct: 26 MRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85
Query: 59 EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNIL 118
E + + SLD+ + + I V I K L LH +L ++HRD+K SN+L
Sbjct: 86 ELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVL 142
Query: 119 LDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYV---LGGQ-LTMKADVYSFG 174
++ K+ DFG++ D++ AG Y+APE + L + ++K+D++S G
Sbjct: 143 INALGQVKMCDFGISGYLVDDVAKDID--AGCKPYMAPERINPELNQKGYSVKSDIWSLG 200
Query: 175 VLVLEIISGRNSGKAMWG----QMNKFLLEWAWQLHQEEKPLELVD 216
+ ++E+ R + WG Q+ + + E + QL ++ E VD
Sbjct: 201 ITMIELAILRFPYDS-WGTPFQQLKQVVEEPSPQLPADKFSAEFVD 245
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 20/186 (10%)
Query: 7 GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN 64
G R+AVK LS +S + E+ L +++H N++ L+ R L E +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDV 102
Query: 65 SLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
L L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++
Sbjct: 103 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 159
Query: 121 QEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVL 178
++ KI D GLA+ D +T ++ TR Y APE +L D++S G ++
Sbjct: 160 EDCELKILDGGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 179 EIISGR 184
E+++GR
Sbjct: 215 ELLTGR 220
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 18/184 (9%)
Query: 7 GRRIAVKPLS---AESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYE-YVE 62
G+ AVK +S + K + E+ L + HPN+++L LV E Y
Sbjct: 51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 110
Query: 63 NNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD-- 120
D ++ + + + + I + G+ ++H+ IVHRD+K N+LL+
Sbjct: 111 GELFDEII-----SRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESK 162
Query: 121 -QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLE 179
++ N +I DFGL+ F + + +I GT Y+APE VL G K DV+S GV++
Sbjct: 163 SKDANIRIIDFGLSTHFEAS-KKMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYI 219
Query: 180 IISG 183
++SG
Sbjct: 220 LLSG 223
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENN 64
R +A+K LS +++ + E++ + V H N++ L+ Q T Y+
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+D L + ++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 110 LMDANLXQVIQ--MELDHERMSYLLYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXT 164
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
KI DFGLA+ + + T T Y APE +LG D++S G ++ E++ +
Sbjct: 165 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
Query: 185 --NSGKAMWGQMNKFL 198
G+ Q NK +
Sbjct: 223 ILFPGRDYIDQWNKVI 238
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 30/195 (15%)
Query: 7 GRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCCV----QGTRRILVYEYV 61
G +AVK S+ + K RE TE+ +RH N++ I + T+ L+ Y
Sbjct: 60 GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYH 117
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV-----PHIVHRDIKASN 116
E SL L T + I + IA GLA LH E+ P I HRD+K+ N
Sbjct: 118 EMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKN 172
Query: 117 ILLDQEFNPKIGDFGLAKLFPDNITHITT----RIAGTTGYLAPEYVLGGQLTM------ 166
IL+ + I D GLA + + + R+ GT Y+APE VL + +
Sbjct: 173 ILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAPE-VLDETIQVDCFDSY 230
Query: 167 -KADVYSFGVLVLEI 180
+ D+++FG+++ E+
Sbjct: 231 KRVDIWAFGLVLWEV 245
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 13 KPLSAESKQGV-REFIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
K + S++GV RE I E+ L ++HPN++ L T IL+ E V L L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK---- 126
A K + L E+ ++ I G+ +LH I H D+K NI+L PK
Sbjct: 106 --AEKES--LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
I DFGLA + + I GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 159 IIDFGLAHKI--DFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSD 87
EI L ++H N+V L T LV + V L DR+L EK +
Sbjct: 56 EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYT------EKDAS 109
Query: 88 ICVG-IAKGLAFLHEELVPHIVHRDIKASNIL-LDQEFNPKI--GDFGLAKLFPDNITHI 143
+ + + + +LHE IVHRD+K N+L L E N KI DFGL+K+ + I
Sbjct: 110 LVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM-- 164
Query: 144 TTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
+ GT GY+APE + + D +S GV+ ++ G
Sbjct: 165 -STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+M + + P +V L G +G + E +E SL +++ K L E R+
Sbjct: 135 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV----KEQGCLP-EDRALY 189
Query: 89 CVGIA-KGLAFLHEELVPHIVHRDIKASNILLDQE-FNPKIGDFGLA-KLFPDNITH--- 142
+G A +GL +LH I+H D+KA N+LL + + + DFG A L PD +
Sbjct: 190 YLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLL 246
Query: 143 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
I GT ++APE VLG K DV+S ++L +++G
Sbjct: 247 TGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 18/184 (9%)
Query: 7 GRRIAVKPLS---AESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYE-YVE 62
G+ AVK +S + K + E+ L + HPN+++L LV E Y
Sbjct: 74 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 133
Query: 63 NNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD-- 120
D ++ + + + + I + G+ ++H+ IVHRD+K N+LL+
Sbjct: 134 GELFDEII-----SRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESK 185
Query: 121 -QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLE 179
++ N +I DFGL+ F + + +I GT Y+APE VL G K DV+S GV++
Sbjct: 186 SKDANIRIIDFGLSTHFEAS-KKMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYI 242
Query: 180 IISG 183
++SG
Sbjct: 243 LLSG 246
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
E+M + + P +V L G +G + E +E SL +++ K L E R+
Sbjct: 116 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV----KEQGCLP-EDRALY 170
Query: 89 CVGIA-KGLAFLHEELVPHIVHRDIKASNILLDQE-FNPKIGDFGLA-KLFPDNITH--- 142
+G A +GL +LH I+H D+KA N+LL + + + DFG A L PD +
Sbjct: 171 YLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLL 227
Query: 143 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
I GT ++APE VLG K DV+S ++L +++G
Sbjct: 228 TGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 42/202 (20%)
Query: 11 AVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVELIGCCVQG--TRRIL-----VYEYVE 62
A+K + +++ RE + E+ L+ + HP +V ++ T ++ VY Y++
Sbjct: 34 AIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQ 93
Query: 63 NNSLDRVLLGATKANIKLNW--------EKRSDICVGI----AKGLAFLHEELVPHIVHR 110
+ K N+K +W E+ +C+ I A+ + FLH + ++HR
Sbjct: 94 -------MQLCRKENLK-DWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHR 142
Query: 111 DIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT-----------TRIAGTTGYLAPEYV 159
D+K SNI + K+GDFGL + T T GT Y++PE +
Sbjct: 143 DLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQI 202
Query: 160 LGGQLTMKADVYSFGVLVLEII 181
G + K D++S G+++ E++
Sbjct: 203 HGNSYSHKVDIFSLGLILFELL 224
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 19/188 (10%)
Query: 4 LTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVY 58
L R A+K L E + ++E ++T E +S + HP V+L +
Sbjct: 54 LATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111
Query: 59 EYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
Y +N L + + +G+ + I L +LH + I+HRD+K N
Sbjct: 112 SYAKNGCLLKYIRKIGSFDETCTRFY------TAEIVSALEYLHGK---GIIHRDLKPEN 162
Query: 117 ILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGV 175
ILL+++ + +I DFG AK L P++ GT Y++PE + + +D+++ G
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGC 222
Query: 176 LVLEIISG 183
++ ++++G
Sbjct: 223 IIYQLVAG 230
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 18/184 (9%)
Query: 7 GRRIAVKPLS---AESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYE-YVE 62
G+ AVK +S + K + E+ L + HPN+++L LV E Y
Sbjct: 75 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 134
Query: 63 NNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD-- 120
D ++ + + + + I + G+ ++H+ IVHRD+K N+LL+
Sbjct: 135 GELFDEII-----SRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESK 186
Query: 121 -QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLE 179
++ N +I DFGL+ F + + +I GT Y+APE VL G K DV+S GV++
Sbjct: 187 SKDANIRIIDFGLSTHFEAS-KKMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYI 243
Query: 180 IISG 183
++SG
Sbjct: 244 LLSG 247
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENN 64
R +A+K LS +++ + E++ + V H N++ L+ Q T Y+
Sbjct: 43 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 102
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+D L + ++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 103 LMDANLXQVIQ--MELDHERMSYLLYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXT 157
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
KI DFGLA+ + + T T Y APE +LG D++S G ++ E++ +
Sbjct: 158 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
Query: 185 --NSGKAMWGQMNKFL 198
G+ Q NK +
Sbjct: 216 ILFPGRDYIDQWNKVI 231
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENN 64
R +A+K LS +++ + E++ + V H N++ L+ Q T Y+
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+D L + ++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 110 LMDANLXQVIQ--MELDHERMSYLLYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXT 164
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
KI DFGLA+ + + T T Y APE +LG D++S G ++ E++ +
Sbjct: 165 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
Query: 185 --NSGKAMWGQMNKFL 198
G+ Q NK +
Sbjct: 223 ILFPGRDYIDQWNKVI 238
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
EI+ ++RHPN+V + T +V EY L + A + + ++
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG----RFSEDEARFF 120
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP--KIGDFGLAKLFPDNITHITTR 146
+ G+++ H + HRD+K N LLD P KI DFG +K ++ H +
Sbjct: 121 FQQLISGVSYAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA---SVLHSQPK 174
Query: 147 IA-GTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
A GT Y+APE +L + K ADV+S GV + ++ G
Sbjct: 175 SAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 13 KPLSAESKQGV-REFIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
K + S++GV RE I E+ L ++HPN++ L T IL+ E V L L
Sbjct: 45 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 104
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK---- 126
A K + L E+ ++ I G+ +LH I H D+K NI+L PK
Sbjct: 105 --AEKES--LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIK 157
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
I DFGLA + + I GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 158 IIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 4 LTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVY 58
L R A+K L E + ++E ++T E +S + HP V+L +
Sbjct: 31 LATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 88
Query: 59 EYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
Y +N L + + +G+ + I L +LH + I+HRD+K N
Sbjct: 89 SYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLHGK---GIIHRDLKPEN 139
Query: 117 ILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGV 175
ILL+++ + +I DFG AK L P++ GT Y++PE + +D+++ G
Sbjct: 140 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 199
Query: 176 LVLEIISG 183
++ ++++G
Sbjct: 200 IIYQLVAG 207
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 40/212 (18%)
Query: 6 NGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILV-------- 57
+ R A+K + +++ + ++E+ L+++ H +V ++ RR V
Sbjct: 30 DSRYYAIKKIR-HTEEKLSTILSEVXLLASLNHQYVVRYYAAWLE--RRNFVKPXTAVKK 86
Query: 58 -------YEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHR 110
EY EN +L ++ N+ ++ + I + L+++H + I+HR
Sbjct: 87 KSTLFIQXEYCENRTLYDLI---HSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHR 140
Query: 111 DIKASNILLDQEFNPKIGDFGLAK--------------LFPDNITHITTRIAGTTGYLAP 156
++K NI +D+ N KIGDFGLAK P + ++T+ I GT Y+A
Sbjct: 141 NLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI-GTAXYVAT 199
Query: 157 EYVLG-GQLTMKADVYSFGVLVLEIISGRNSG 187
E + G G K D YS G++ E I ++G
Sbjct: 200 EVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTG 231
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 13 KPLSAESKQGV-REFIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
K + S++GV RE I E+ L ++HPN++ L T IL+ E V L L
Sbjct: 45 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 104
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK---- 126
A K + L E+ ++ I G+ +LH I H D+K NI+L PK
Sbjct: 105 --AEKES--LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIK 157
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
I DFGLA + + I GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 158 IIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 26/188 (13%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNS 65
+++AVK LS +S R E+ L +++H N++ L+ T +E+ S
Sbjct: 54 QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATS-------IEDFS 106
Query: 66 ---LDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNIL 118
L L+GA NI L+ E + + +GL ++H I+HRD+K SN+
Sbjct: 107 EVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHS---AGIIHRDLKPSNVA 163
Query: 119 LDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVL 176
++++ +I DFGLA+ + +T ++ TR Y APE +L D++S G +
Sbjct: 164 VNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 177 VLEIISGR 184
+ E++ G+
Sbjct: 219 MAELLQGK 226
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 13 KPLSAESKQGV-REFIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
K + S++GV RE I E+ L ++HPN++ L T IL+ E V L L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK---- 126
A K + L E+ ++ I G+ +LH I H D+K NI+L PK
Sbjct: 106 --AEKES--LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
I DFGLA + + I GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 159 IIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 4 LTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVY 58
L R A+K L E + ++E ++T E +S + HP V+L +
Sbjct: 32 LATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 89
Query: 59 EYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
Y +N L + + +G+ + I L +LH + I+HRD+K N
Sbjct: 90 SYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLHGK---GIIHRDLKPEN 140
Query: 117 ILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGV 175
ILL+++ + +I DFG AK L P++ GT Y++PE + +D+++ G
Sbjct: 141 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 200
Query: 176 LVLEIISG 183
++ ++++G
Sbjct: 201 IIYQLVAG 208
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 13 KPLSAESKQGV-REFIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
K + S++GV RE I E+ L ++HPN++ L T IL+ E V L L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK---- 126
A K + L E+ ++ I G+ +LH I H D+K NI+L PK
Sbjct: 106 --AEKES--LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
I DFGLA + + I GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 159 IIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 13 KPLSAESKQGV-REFIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
K + S++GV RE I E+ L ++HPN++ L T IL+ E V L L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK---- 126
A K + L E+ ++ I G+ +LH I H D+K NI+L PK
Sbjct: 106 --AEKES--LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
I DFGLA + + I GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 159 IIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 4 LTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVY 58
L R A+K L E + ++E ++T E +S + HP V+L +
Sbjct: 30 LATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 87
Query: 59 EYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
Y +N L + + +G+ + I L +LH + I+HRD+K N
Sbjct: 88 SYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLHGK---GIIHRDLKPEN 138
Query: 117 ILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGV 175
ILL+++ + +I DFG AK L P++ GT Y++PE + +D+++ G
Sbjct: 139 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 198
Query: 176 LVLEIISG 183
++ ++++G
Sbjct: 199 IIYQLVAG 206
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 25/181 (13%)
Query: 15 LSAESKQGVREF-ITEIMTLSNVR-HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLG 72
SAE Q +RE + E+ L V HPN+++L T LV++ ++ L L
Sbjct: 45 FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-- 102
Query: 73 ATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGL 132
+ L+ ++ I + + + LH+ +IVHRD+K NILLD + N K+ DFG
Sbjct: 103 --TEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGF 157
Query: 133 A-KLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM---------KADVYSFGVLVLEIIS 182
+ +L P + GT YLAPE + + +M + D++S GV++ +++
Sbjct: 158 SCQLDPGEKLR---EVCGTPSYLAPEII---ECSMNDNHPGYGKEVDMWSTGVIMYTLLA 211
Query: 183 G 183
G
Sbjct: 212 G 212
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 10/179 (5%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENN 64
R +A+K LS +++ + E++ + V H N++ L+ Q + Y+
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+D L + ++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 110 LMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 164
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
KI DFGLA+ + + T T Y APE +LG D++S G ++ E+I G
Sbjct: 165 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 10/179 (5%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENN 64
R +A+K LS +++ + E++ + V H N++ L+ Q + Y+
Sbjct: 51 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 110
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+D L + ++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 111 LMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 165
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
KI DFGLA+ + + T T Y APE +LG D++S G ++ E+I G
Sbjct: 166 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 13 KPLSAESKQGV-REFIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
K + S++GV RE I E+ L ++HPN++ L T IL+ E V L L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK---- 126
A K + L E+ ++ I G+ +LH I H D+K NI+L PK
Sbjct: 106 --AEKES--LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
I DFGLA + + I GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 159 IIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 26/188 (13%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNS 65
+++AVK LS +S R E+ L +++H N++ L+ T +E+ S
Sbjct: 46 QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATS-------IEDFS 98
Query: 66 ---LDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNIL 118
L L+GA NI L+ E + + +GL ++H I+HRD+K SN+
Sbjct: 99 EVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS---AGIIHRDLKPSNVA 155
Query: 119 LDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVL 176
++++ +I DFGLA+ + +T ++ TR Y APE +L D++S G +
Sbjct: 156 VNEDCELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCI 210
Query: 177 VLEIISGR 184
+ E++ G+
Sbjct: 211 MAELLQGK 218
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 13 KPLSAESKQGV-REFIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
K + S++GV RE I E+ L ++HPN++ L T IL+ E V L L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK---- 126
A K + L E+ ++ I G+ +LH I H D+K NI+L PK
Sbjct: 106 --AEKES--LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
I DFGLA + + I GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 159 IIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 26/188 (13%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNS 65
+++AVK LS +S R E+ L +++H N++ L+ T +E+ S
Sbjct: 54 QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATS-------IEDFS 106
Query: 66 ---LDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNIL 118
L L+GA NI L+ E + + +GL ++H I+HRD+K SN+
Sbjct: 107 EVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS---AGIIHRDLKPSNVA 163
Query: 119 LDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVL 176
++++ +I DFGLA+ + +T ++ TR Y APE +L D++S G +
Sbjct: 164 VNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 177 VLEIISGR 184
+ E++ G+
Sbjct: 219 MAELLQGK 226
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 10/179 (5%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENN 64
R +A+K LS +++ + E++ + V H N++ L+ Q + Y+
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+D L + ++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 110 LMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 164
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
KI DFGLA+ + + T T Y APE +LG D++S G ++ E+I G
Sbjct: 165 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 103/223 (46%), Gaps = 30/223 (13%)
Query: 8 RRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL--------------IGCCVQGTR 53
+R+A+K + Q V+ + EI + + H N+V++ +G +
Sbjct: 37 KRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNS 96
Query: 54 RILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIK 113
+V EY+E + L L E + +GL ++H +++HRD+K
Sbjct: 97 VYIVQEYMETD------LANVLEQGPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLK 147
Query: 114 ASNILLDQE-FNPKIGDFGLAKLFPDNITHITTRIAG--TTGYLAPEYVLGGQLTMKA-D 169
+N+ ++ E KIGDFGLA++ + +H G T Y +P +L KA D
Sbjct: 148 PANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAID 207
Query: 170 VYSFGVLVLEIISGRN--SGKAMWGQMNKFLLEWAWQLHQEEK 210
+++ G + E+++G+ +G QM + +LE +H+E++
Sbjct: 208 MWAAGCIFAEMLTGKTLFAGAHELEQM-QLILESIPVVHEEDR 249
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENN 64
R +A+K LS +++ + E++ + V H N++ L+ Q T Y+
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+D L + ++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 110 LMDANLXQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDXT 164
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
KI DFGLA+ + + T T Y APE +LG D++S G ++ E++ +
Sbjct: 165 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
Query: 185 --NSGKAMWGQMNKFL 198
G+ Q NK +
Sbjct: 223 ILFPGRDYIDQWNKVI 238
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 4 LTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVY 58
L R A+K L E + ++E ++T E +S + HP V+L +
Sbjct: 29 LATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 86
Query: 59 EYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
Y +N L + + +G+ + I L +LH + I+HRD+K N
Sbjct: 87 SYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLHGK---GIIHRDLKPEN 137
Query: 117 ILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGV 175
ILL+++ + +I DFG AK L P++ GT Y++PE + +D+++ G
Sbjct: 138 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 197
Query: 176 LVLEIISG 183
++ ++++G
Sbjct: 198 IIYQLVAG 205
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 28 TEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRS 86
EI ++ + HP L+ L +L+ E++ L DR+ + K++ +
Sbjct: 97 NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRI----AAEDYKMSEAEVI 152
Query: 87 DICVGIAKGLAFLHEELVPHIVHRDIKASNILLD--QEFNPKIGDFGLA-KLFPDNITHI 143
+ +GL +HE IVH DIK NI+ + + + KI DFGLA KL PD I +
Sbjct: 153 NYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV 209
Query: 144 TTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
TT T + APE V + D+++ GVL ++SG
Sbjct: 210 TT---ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENN 64
R +A+K LS +++ + E++ + V H N++ L+ Q T Y+
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+D L + ++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 110 LMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDXT 164
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
KI DFGLA+ + + T T Y APE +LG D++S G ++ E++ +
Sbjct: 165 LKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
Query: 185 --NSGKAMWGQMNKFL 198
G+ Q NK +
Sbjct: 223 ILFPGRDYIDQWNKVI 238
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 4 LTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVY 58
L R A+K L E + ++E ++T E +S + HP V+L +
Sbjct: 55 LATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 112
Query: 59 EYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
Y +N L + + +G+ + I L +LH + I+HRD+K N
Sbjct: 113 SYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLHGK---GIIHRDLKPEN 163
Query: 117 ILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGV 175
ILL+++ + +I DFG AK L P++ GT Y++PE + +D+++ G
Sbjct: 164 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGC 223
Query: 176 LVLEIISG 183
++ ++++G
Sbjct: 224 IIYQLVAG 231
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 9/158 (5%)
Query: 27 ITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRS 86
+ EI L ++H N+V L + LV+E+ + + L + N L+ E
Sbjct: 49 LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQD-LKKYF---DSCNGDLDPEIVK 104
Query: 87 DICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR 146
+ KGL F H +++HRD+K N+L+++ K+ DFGLA+ F + +
Sbjct: 105 SFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAE 161
Query: 147 IAGTTGYLAPEYVLGGQL-TMKADVYSFGVLVLEIISG 183
+ T Y P+ + G +L + D++S G + E+ +
Sbjct: 162 VV-TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANA 198
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 4 LTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVY 58
L R A+K L E + ++E ++T E +S + HP V+L +
Sbjct: 51 LATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 108
Query: 59 EYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
Y +N L + + +G+ + I L +LH + I+HRD+K N
Sbjct: 109 SYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLHGK---GIIHRDLKPEN 159
Query: 117 ILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGV 175
ILL+++ + +I DFG AK L P++ GT Y++PE + +D+++ G
Sbjct: 160 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGC 219
Query: 176 LVLEIISG 183
++ ++++G
Sbjct: 220 IIYQLVAG 227
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 13 KPLSAESKQGV-REFIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
K + S++GV RE I E+ L ++HPN++ L T IL+ E V L L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK---- 126
A K + L E+ ++ I G+ +LH I H D+K NI+L PK
Sbjct: 106 --AEKES--LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
I DFGLA + + I GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 159 IIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 13 KPLSAESKQGV-REFIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
K + S++GV RE I E+ L ++HPN++ L T IL+ E V L L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK---- 126
A K + L E+ ++ I G+ +LH I H D+K NI+L PK
Sbjct: 106 --AEKES--LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
I DFGLA + + I GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 159 IIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 13 KPLSAESKQGV-REFIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
K + S++GV RE I E+ L ++HPN++ L T IL+ E V L L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK---- 126
A K + L E+ ++ I G+ +LH I H D+K NI+L PK
Sbjct: 106 --AEKES--LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
I DFGLA + + I GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 159 IIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 18/183 (9%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC-----CVQGTRRILVYEY 60
R +A+K LS +++ + E++ + V H N++ L+ ++ + + +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ + +L +V+ ++L+ E+ S + + G+ LH I+HRD+K SNI++
Sbjct: 110 LMDANLSQVI------QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVK 160
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ KI DFGLA+ + + T T Y APE +LG D++S G ++ E+
Sbjct: 161 SDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 181 ISG 183
I G
Sbjct: 219 IKG 221
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 4 LTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVY 58
L R A+K L E + ++E ++T E +S + HP V+L +
Sbjct: 51 LATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 108
Query: 59 EYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
Y +N L + + +G+ + I L +LH + I+HRD+K N
Sbjct: 109 SYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLHGK---GIIHRDLKPEN 159
Query: 117 ILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGV 175
ILL+++ + +I DFG AK L P++ GT Y++PE + +D+++ G
Sbjct: 160 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 219
Query: 176 LVLEIISG 183
++ ++++G
Sbjct: 220 IIYQLVAG 227
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 4 LTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVY 58
L R A+K L E + ++E ++T E +S + HP V+L +
Sbjct: 52 LATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 109
Query: 59 EYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
Y +N L + + +G+ + I L +LH + I+HRD+K N
Sbjct: 110 SYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLHGK---GIIHRDLKPEN 160
Query: 117 ILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGV 175
ILL+++ + +I DFG AK L P++ GT Y++PE + +D+++ G
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 220
Query: 176 LVLEIISG 183
++ ++++G
Sbjct: 221 IIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 4 LTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVY 58
L R A+K L E + ++E ++T E +S + HP V+L +
Sbjct: 54 LATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111
Query: 59 EYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
Y +N L + + +G+ + I L +LH + I+HRD+K N
Sbjct: 112 SYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLHGK---GIIHRDLKPEN 162
Query: 117 ILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGV 175
ILL+++ + +I DFG AK L P++ GT Y++PE + +D+++ G
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 222
Query: 176 LVLEIISG 183
++ ++++G
Sbjct: 223 IIYQLVAG 230
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 13 KPLSAESKQGV-REFIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
K + S++GV RE I E+ L ++HPN++ L T IL+ E V L L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK---- 126
A K + L E+ ++ I G+ +LH I H D+K NI+L PK
Sbjct: 106 --AEKES--LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
I DFGLA + + I GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 159 IIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 4 LTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVY 58
L R A+K L E + ++E ++T E +S + HP V+L +
Sbjct: 52 LATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 109
Query: 59 EYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
Y +N L + + +G+ + I L +LH + I+HRD+K N
Sbjct: 110 SYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLHGK---GIIHRDLKPEN 160
Query: 117 ILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGV 175
ILL+++ + +I DFG AK L P++ GT Y++PE + +D+++ G
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 220
Query: 176 LVLEIISG 183
++ ++++G
Sbjct: 221 IIYQLVAG 228
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 18/183 (9%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC-----CVQGTRRILVYEY 60
R +A+K LS +++ + E++ + V H N++ L+ ++ + + +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ + +L +V+ ++L+ E+ S + + G+ LH I+HRD+K SNI++
Sbjct: 110 LMDANLSQVI------QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVK 160
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ KI DFGLA+ + + T T Y APE +LG D++S G ++ E+
Sbjct: 161 SDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 181 ISG 183
I G
Sbjct: 219 IKG 221
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 4 LTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVY 58
L R A+K L E + ++E ++T E +S + HP V+L +
Sbjct: 55 LATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 112
Query: 59 EYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
Y +N L + + +G+ + I L +LH + I+HRD+K N
Sbjct: 113 SYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLHGK---GIIHRDLKPEN 163
Query: 117 ILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGV 175
ILL+++ + +I DFG AK L P++ GT Y++PE + +D+++ G
Sbjct: 164 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 223
Query: 176 LVLEIISG 183
++ ++++G
Sbjct: 224 IIYQLVAG 231
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 25/181 (13%)
Query: 15 LSAESKQGVREF-ITEIMTLSNVR-HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLG 72
SAE Q +RE + E+ L V HPN+++L T LV++ ++ L L
Sbjct: 58 FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-- 115
Query: 73 ATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGL 132
+ L+ ++ I + + + LH+ +IVHRD+K NILLD + N K+ DFG
Sbjct: 116 --TEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGF 170
Query: 133 A-KLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM---------KADVYSFGVLVLEIIS 182
+ +L P + GT YLAPE + + +M + D++S GV++ +++
Sbjct: 171 SCQLDPGEKLR---EVCGTPSYLAPEII---ECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
Query: 183 G 183
G
Sbjct: 225 G 225
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 4 LTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVY 58
L R A+K L E + ++E ++T E +S + HP V+L +
Sbjct: 52 LATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 109
Query: 59 EYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
Y +N L + + +G+ + I L +LH + I+HRD+K N
Sbjct: 110 SYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLHGK---GIIHRDLKPEN 160
Query: 117 ILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGV 175
ILL+++ + +I DFG AK L P++ GT Y++PE + +D+++ G
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 220
Query: 176 LVLEIISG 183
++ ++++G
Sbjct: 221 IIYQLVAG 228
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 4 LTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVY 58
L R A+K L E + ++E ++T E +S + HP V+L +
Sbjct: 36 LATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 93
Query: 59 EYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
Y +N L + + +G+ + I L +LH + I+HRD+K N
Sbjct: 94 SYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLHGK---GIIHRDLKPEN 144
Query: 117 ILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGV 175
ILL+++ + +I DFG AK L P++ GT Y++PE + +D+++ G
Sbjct: 145 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 204
Query: 176 LVLEIISG 183
++ ++++G
Sbjct: 205 IIYQLVAG 212
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 18/183 (9%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC-----CVQGTRRILVYEY 60
R +A+K LS +++ + E++ + V H N++ L+ ++ + + +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ + +L +V+ ++L+ E+ S + + G+ LH I+HRD+K SNI++
Sbjct: 110 LMDANLSQVI------QMELDHERMSYLLYQMLVGIKHLHSA---GIIHRDLKPSNIVVK 160
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ KI DFGLA+ + + T T Y APE +LG D++S G ++ E+
Sbjct: 161 SDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 181 ISG 183
I G
Sbjct: 219 IKG 221
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENN 64
R +A+K LS +++ + E++ + V H N++ L+ Q T Y+
Sbjct: 44 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 103
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+D L + ++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 104 LMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 158
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
KI DFGLA+ + + T T Y APE +LG D++S G ++ E++ +
Sbjct: 159 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
Query: 185 --NSGKAMWGQMNKFL 198
G+ Q NK +
Sbjct: 217 ILFPGRDYIDQWNKVI 232
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 4 LTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVY 58
L R A+K L E + ++E ++T E +S + HP V+L +
Sbjct: 52 LATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 109
Query: 59 EYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
Y +N L + + +G+ + I L +LH + I+HRD+K N
Sbjct: 110 SYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLHGK---GIIHRDLKPEN 160
Query: 117 ILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGV 175
ILL+++ + +I DFG AK L P++ GT Y++PE + +D+++ G
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGC 220
Query: 176 LVLEIISG 183
++ ++++G
Sbjct: 221 IIYQLVAG 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 4 LTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVY 58
L R A+K L E + ++E ++T E +S + HP V+L +
Sbjct: 54 LATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111
Query: 59 EYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
Y +N L + + +G+ + I L +LH + I+HRD+K N
Sbjct: 112 SYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLHGK---GIIHRDLKPEN 162
Query: 117 ILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGV 175
ILL+++ + +I DFG AK L P++ GT Y++PE + +D+++ G
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 222
Query: 176 LVLEIISG 183
++ ++++G
Sbjct: 223 IIYQLVAG 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 4 LTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVY 58
L R A+K L E + ++E ++T E +S + HP V+L +
Sbjct: 54 LATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111
Query: 59 EYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
Y +N L + + +G+ + I L +LH + I+HRD+K N
Sbjct: 112 SYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLHGK---GIIHRDLKPEN 162
Query: 117 ILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGV 175
ILL+++ + +I DFG AK L P++ GT Y++PE + +D+++ G
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 222
Query: 176 LVLEIISG 183
++ ++++G
Sbjct: 223 IIYQLVAG 230
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENN 64
R +A+K LS +++ + E++ + V H N++ L+ Q T Y+
Sbjct: 51 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 110
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+D L + ++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 111 LMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 165
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
KI DFGLA+ + + T T Y APE +LG D++S G ++ E++ +
Sbjct: 166 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
Query: 185 --NSGKAMWGQMNKFL 198
G+ Q NK +
Sbjct: 224 ILFPGRDYIDQWNKVI 239
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENN 64
R +A+K LS +++ + E++ + V H N++ L+ Q T Y+
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+D L + ++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 110 LMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 164
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
KI DFGLA+ + + T T Y APE +LG D++S G ++ E++ +
Sbjct: 165 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
Query: 185 --NSGKAMWGQMNKFL 198
G+ Q NK +
Sbjct: 223 ILFPGRDYIDQWNKVI 238
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 25/181 (13%)
Query: 15 LSAESKQGVREF-ITEIMTLSNVR-HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLG 72
SAE Q +RE + E+ L V HPN+++L T LV++ ++ L L
Sbjct: 58 FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-- 115
Query: 73 ATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGL 132
+ L+ ++ I + + + LH+ +IVHRD+K NILLD + N K+ DFG
Sbjct: 116 --TEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGF 170
Query: 133 A-KLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM---------KADVYSFGVLVLEIIS 182
+ +L P + GT YLAPE + + +M + D++S GV++ +++
Sbjct: 171 SCQLDPGEKLR---SVCGTPSYLAPEII---ECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
Query: 183 G 183
G
Sbjct: 225 G 225
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 18/183 (9%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC-----CVQGTRRILVYEY 60
R +A+K LS +++ + E++ + V H N++ L+ ++ + + +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD 120
+ + +L +V+ ++L+ E+ S + + G+ LH I+HRD+K SNI++
Sbjct: 110 LMDANLSQVI------QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVK 160
Query: 121 QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
+ KI DFGLA+ + + T T Y APE +LG D++S G ++ E+
Sbjct: 161 SDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 181 ISG 183
I G
Sbjct: 219 IKG 221
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 4 LTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVY 58
L R A+K L E + ++E ++T E +S + HP V+L +
Sbjct: 57 LATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 114
Query: 59 EYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
Y +N L + + +G+ + I L +LH + I+HRD+K N
Sbjct: 115 SYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLHGK---GIIHRDLKPEN 165
Query: 117 ILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGV 175
ILL+++ + +I DFG AK L P++ GT Y++PE + +D+++ G
Sbjct: 166 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 225
Query: 176 LVLEIISG 183
++ ++++G
Sbjct: 226 IIYQLVAG 233
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 13 KPLSAESKQGV-REFIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
K + S++GV RE I E+ L ++HPN++ L T IL+ E V L L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK---- 126
A K + L E+ ++ I G+ +LH I H D+K NI+L PK
Sbjct: 106 --AEKES--LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
I DFGLA + + I GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 159 IIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENN 64
R +A+K LS +++ + E++ + V H N++ L+ Q T Y+
Sbjct: 43 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 102
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+D L + ++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 103 LMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 157
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
KI DFGLA+ + + T T Y APE +LG D++S G ++ E++ +
Sbjct: 158 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
Query: 185 --NSGKAMWGQMNKFL 198
G+ Q NK +
Sbjct: 216 ILFPGRDYIDQWNKVI 231
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 4 LTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVY 58
L R A+K L E + ++E ++T E +S + HP V+L +
Sbjct: 54 LATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111
Query: 59 EYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
Y +N L + + +G+ + I L +LH + I+HRD+K N
Sbjct: 112 SYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLHGK---GIIHRDLKPEN 162
Query: 117 ILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGV 175
ILL+++ + +I DFG AK L P++ GT Y++PE + +D+++ G
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGC 222
Query: 176 LVLEIISG 183
++ ++++G
Sbjct: 223 IIYQLVAG 230
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENN 64
R +A+K LS +++ + E++ + V H N++ L+ Q T Y+
Sbjct: 44 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 103
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+D L + ++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 104 LMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 158
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
KI DFGLA+ + + T T Y APE +LG D++S G ++ E++ +
Sbjct: 159 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
Query: 185 --NSGKAMWGQMNKFL 198
G+ Q NK +
Sbjct: 217 ILFPGRDYIDQWNKVI 232
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENN 64
R +A+K LS +++ + E++ + V H N++ L+ Q T Y+
Sbjct: 49 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 108
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+D L + ++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 109 LMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 163
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
KI DFGLA+ + + T T Y APE +LG D++S G ++ E++ +
Sbjct: 164 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
Query: 185 --NSGKAMWGQMNKFL 198
G+ Q NK +
Sbjct: 222 ILFPGRDYIDQWNKVI 237
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENN 64
R +A+K LS +++ + E++ + V H N++ L+ Q T Y+
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+D L + ++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 110 LMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 164
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
KI DFGLA+ + + T T Y APE +LG D++S G ++ E++ +
Sbjct: 165 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
Query: 185 --NSGKAMWGQMNKFL 198
G+ Q NK +
Sbjct: 223 ILFPGRDYIDQWNKVI 238
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 11/165 (6%)
Query: 20 KQGV-REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANI 78
K+GV + EI +++ HPN++ L R L+ EY L + L + +
Sbjct: 63 KEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL----QKSC 118
Query: 79 KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD 138
+ ++ + I +A L + H + V +HRDIK N+LL + KI DFG + P
Sbjct: 119 TFDEQRTATIMEELADALMYCHGKKV---IHRDIKPENLLLGLKGELKIADFGWSVHAP- 174
Query: 139 NITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
++ T + GT YL PE + G K D++ GVL E++ G
Sbjct: 175 SLRRKT--MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENN 64
R +A+K LS +++ + E++ + V H N++ L+ Q T Y+
Sbjct: 51 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 110
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+D L + ++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 111 LMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 165
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
KI DFGLA+ + + T T Y APE +LG D++S G ++ E++ +
Sbjct: 166 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
Query: 185 --NSGKAMWGQMNKFL 198
G+ Q NK +
Sbjct: 224 ILFPGRDYIDQWNKVI 239
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 87/174 (50%), Gaps = 17/174 (9%)
Query: 17 AESKQGV--REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGAT 74
+ S++GV E E+ L +RHPN++ L T +L+ E V L L A
Sbjct: 51 SSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AE 108
Query: 75 KANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNI-LLDQEF-NPKIG--DF 130
K + L ++ + I G+ +LH + I H D+K NI LLD+ NP+I DF
Sbjct: 109 KES--LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDF 163
Query: 131 GLA-KLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
G+A K+ N I GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 164 GIAHKIEAGNEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 10/179 (5%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENN 64
R +A+K LS +++ + E++ + V H N++ L+ Q + Y+
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+D L + ++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 110 LMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 164
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
KI DFGLA+ + + T T Y APE +LG D++S G ++ E+I G
Sbjct: 165 LKILDFGLART--AGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 4 LTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVY 58
L R A+K L E + ++E ++T E +S + HP V+L +
Sbjct: 54 LATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111
Query: 59 EYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
Y +N L + + +G+ + I L +LH + I+HRD+K N
Sbjct: 112 SYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLHGK---GIIHRDLKPEN 162
Query: 117 ILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGV 175
ILL+++ + +I DFG AK L P++ GT Y++PE + +D+++ G
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 222
Query: 176 LVLEIISG 183
++ ++++G
Sbjct: 223 IIYQLVAG 230
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 13 KPLSAESKQGV-REFIT-EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
K + S++GV RE I E+ L ++HPN++ L T IL+ E V L L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL 105
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK---- 126
A K + L E+ ++ I G+ +LH I H D+K NI+L PK
Sbjct: 106 --AEKES--LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
I DFGLA + + I GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 159 IIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 21/184 (11%)
Query: 10 IAVKPLSAESKQGVREFIT-EIMTLSNVR-HPNLVELIGCCVQGTRRILVYEYVENNSLD 67
+ + LS E + VRE E L V HP+++ LI + LV++ + L
Sbjct: 129 VTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELF 188
Query: 68 RVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKI 127
L + L+ ++ I + + ++FLH +IVHRD+K NILLD ++
Sbjct: 189 DYL----TEKVALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRL 241
Query: 128 GDFGLA-KLFPDNITHITTRIAGTTGYLAPEYVLGGQLT-------MKADVYSFGVLVLE 179
DFG + L P + GT GYLAPE +L + + D+++ GV++
Sbjct: 242 SDFGFSCHLEPGEKLR---ELCGTPGYLAPE-ILKCSMDETHPGYGKEVDLWACGVILFT 297
Query: 180 IISG 183
+++G
Sbjct: 298 LLAG 301
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 74/160 (46%), Gaps = 12/160 (7%)
Query: 28 TEIMTLSNVRH-PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRS 86
TE L ++R P LV L T+ L+ +Y+ L L + E
Sbjct: 107 TERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT-----EHEV 161
Query: 87 DICVG-IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT 145
I VG I L LH+ I++RDIK NILLD + + DFGL+K F + T
Sbjct: 162 QIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAY 218
Query: 146 RIAGTTGYLAPEYVLGGQL--TMKADVYSFGVLVLEIISG 183
GT Y+AP+ V GG D +S GVL+ E+++G
Sbjct: 219 DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 19/185 (10%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQ------GTRRILVYEYVEN 63
I V ++ + ++ +++ I + S+ H N+ G ++ + LV E+
Sbjct: 54 IKVMDVTGDEEEEIKQEINMLKKYSH--HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGA 111
Query: 64 NSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEF 123
S+ ++ +K W + IC I +GL+ LH+ V +HRDIK N+LL +
Sbjct: 112 GSVTDLIKNTKGNTLKEEW--IAYICREILRGLSHLHQHKV---IHRDIKGQNVLLTENA 166
Query: 124 NPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQ-----LTMKADVYSFGVLVL 178
K+ DFG++ + T I GT ++APE + + K+D++S G+ +
Sbjct: 167 EVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAI 225
Query: 179 EIISG 183
E+ G
Sbjct: 226 EMAEG 230
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENN 64
R +A+K LS +++ + E++ + V H N++ L+ Q T Y+
Sbjct: 88 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 147
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+D L + ++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 148 LMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 202
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
KI DFGLA+ + + T T Y APE +LG D++S G ++ E++ +
Sbjct: 203 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
Query: 185 --NSGKAMWGQMNKFL 198
G+ Q NK +
Sbjct: 261 ILFPGRDYIDQWNKVI 276
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 12/166 (7%)
Query: 27 ITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRS 86
+ EI L ++H N+V L + LV+E+ + + L + N L+ E
Sbjct: 49 LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQD-LKKYF---DSCNGDLDPEIVK 104
Query: 87 DICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR 146
+ KGL F H +++HRD+K N+L+++ K+ +FGLA+ F + +
Sbjct: 105 SFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE 161
Query: 147 IAGTTGYLAPEYVLGGQL-TMKADVYSFGVLVLEIISGRNSGKAMW 191
+ T Y P+ + G +L + D++S G + E+ N+G+ ++
Sbjct: 162 VV-TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELA---NAGRPLF 203
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 85/173 (49%), Gaps = 15/173 (8%)
Query: 17 AESKQGV--REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGAT 74
+ S++GV E E+ L +RHPN++ L T +L+ E V L L A
Sbjct: 44 SSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AE 101
Query: 75 KANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNI-LLDQEF-NPKIG--DF 130
K + L ++ + I G+ +LH + I H D+K NI LLD+ NP+I DF
Sbjct: 102 KES--LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDF 156
Query: 131 GLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
G+A + I GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 157 GIAHKI--EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 15/177 (8%)
Query: 13 KPLSAESKQGV--REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
K S S++GV E E+ L V H N++ L T +L+ E V L L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----K 126
A K + L+ E+ + I G+ +LH I H D+K NI+L + P K
Sbjct: 107 --AQKES--LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
+ DFGLA D + I GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 160 LIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENN 64
R +A+K LS +++ + E++ + V H N++ L+ Q T Y+
Sbjct: 88 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 147
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+D L + ++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 148 LMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 202
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
KI DFGLA+ + + T T Y APE +LG D++S G ++ E++ +
Sbjct: 203 LKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
Query: 185 --NSGKAMWGQMNKFL 198
G+ Q NK +
Sbjct: 261 ILFPGRDYIDQWNKVI 276
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 95 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYL 154
GL +H V V+RD+K +NILLD+ + +I D GLA F H + GT GY+
Sbjct: 304 GLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 357
Query: 155 APEYVLGG-QLTMKADVYSFGVLVLEIISGRN 185
APE + G AD +S G ++ +++ G +
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 95 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYL 154
GL +H V V+RD+K +NILLD+ + +I D GLA F H + GT GY+
Sbjct: 304 GLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 357
Query: 155 APEYVLGG-QLTMKADVYSFGVLVLEIISGRN 185
APE + G AD +S G ++ +++ G +
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 15/177 (8%)
Query: 13 KPLSAESKQGV--REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
K S S++GV E E+ L V H N++ L T +L+ E V L L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----K 126
A K + L+ E+ + I G+ +LH I H D+K NI+L + P K
Sbjct: 107 --AQKES--LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
+ DFGLA D + I GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 160 LIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 95 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYL 154
GL +H V V+RD+K +NILLD+ + +I D GLA F H + GT GY+
Sbjct: 303 GLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 356
Query: 155 APEYVLGG-QLTMKADVYSFGVLVLEIISGRN 185
APE + G AD +S G ++ +++ G +
Sbjct: 357 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 388
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 95 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYL 154
GL +H V V+RD+K +NILLD+ + +I D GLA F H + GT GY+
Sbjct: 304 GLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 357
Query: 155 APEYVLGG-QLTMKADVYSFGVLVLEIISGRN 185
APE + G AD +S G ++ +++ G +
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 15/177 (8%)
Query: 13 KPLSAESKQGV--REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
K S S++GV E E+ L V H N++ L T +L+ E V L L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----K 126
A K + L+ E+ + I G+ +LH I H D+K NI+L + P K
Sbjct: 107 --AQKES--LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
+ DFGLA D + I GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 160 LIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 15/177 (8%)
Query: 13 KPLSAESKQGV--REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
K S S++GV E E+ L V H N++ L T +L+ E V L L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----K 126
A K + L+ E+ + I G+ +LH I H D+K NI+L + P K
Sbjct: 107 --AQKES--LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
+ DFGLA D + I GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 160 LIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 15/177 (8%)
Query: 13 KPLSAESKQGV--REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL 70
K S S++GV E E+ L V H N++ L T +L+ E V L L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----K 126
A K + L+ E+ + I G+ +LH I H D+K NI+L + P K
Sbjct: 107 --AQKES--LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
+ DFGLA D + I GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 160 LIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 10/179 (5%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENN 64
R +A+K LS +++ + E++ + V H N++ L+ Q + Y+
Sbjct: 52 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 111
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+D L + ++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 112 LMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 166
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
KI DFGLA+ + + T Y APE +LG D++S G ++ E+I G
Sbjct: 167 LKILDFGLART--AGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 15/171 (8%)
Query: 19 SKQGV--REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKA 76
S++GV E E+ L +RHPN++ L T +L+ E V L L A K
Sbjct: 67 SRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKE 124
Query: 77 NIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNI-LLDQEF-NPKIG--DFGL 132
+ L ++ + I G+ +LH + I H D+K NI LLD+ NP+I DFG+
Sbjct: 125 S--LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 179
Query: 133 AKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
A + I GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 180 AHKI--EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 27 ITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRS 86
+ E++ + + P +V L G +G + E +E SL +++ + E R+
Sbjct: 98 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRA 152
Query: 87 DICVGIA-KGLAFLHEELVPHIVHRDIKASNILLDQEFN-PKIGDFGLA-KLFPDNITH- 142
+G A +GL +LH I+H D+KA N+LL + + + DFG A L PD +
Sbjct: 153 LYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209
Query: 143 --ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
I GT ++APE V+G K D++S ++L +++G
Sbjct: 210 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 27 ITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRS 86
+ E++ + + P +V L G +G + E +E SL +++ + E R+
Sbjct: 112 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRA 166
Query: 87 DICVGIA-KGLAFLHEELVPHIVHRDIKASNILLDQEFN-PKIGDFGLA-KLFPDNITH- 142
+G A +GL +LH I+H D+KA N+LL + + + DFG A L PD +
Sbjct: 167 LYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 223
Query: 143 --ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
I GT ++APE V+G K D++S ++L +++G
Sbjct: 224 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 92 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 151
I KG+ ++H + ++HRD+K SNI L KIGDFGL ++ TR GT
Sbjct: 145 ITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR--TRSKGTL 199
Query: 152 GYLAPEYVLGGQLTMKADVYSFGVLVLEII 181
Y++PE + + D+Y+ G+++ E++
Sbjct: 200 RYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 18/107 (16%)
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL------------ 135
I + IA+ + FLH + ++HRD+K SNI + K+GDFGL
Sbjct: 169 IFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 136 -FPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 181
P TH GT Y++PE + G + K D++S G+++ E++
Sbjct: 226 PMPAYATHXGQ--VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 27 ITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRS 86
+ E++ + + P +V L G +G + E +E SL +++ + E R+
Sbjct: 114 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRA 168
Query: 87 DICVGIA-KGLAFLHEELVPHIVHRDIKASNILLDQEFN-PKIGDFGLA-KLFPDNITH- 142
+G A +GL +LH I+H D+KA N+LL + + + DFG A L PD +
Sbjct: 169 LYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 225
Query: 143 --ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
I GT ++APE V+G K D++S ++L +++G
Sbjct: 226 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+ +K L + F +S + H +LV G CV G ILV E+V+ SLD
Sbjct: 43 VLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLD-T 101
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L K I + W + ++ +A + FL E ++H ++ A NILL +E + K G+
Sbjct: 102 YLKKNKNCINILW--KLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGN 156
Query: 130 FGLAKLFPDNITHITTR----IAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISG 183
KL I+ IT + ++ PE + + L + D +SFG + EI SG
Sbjct: 157 PPFIKLSDPGIS-ITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 20/182 (10%)
Query: 10 IAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENN---S 65
+A+K + E ++G I E+ L +++H N+V L LV+EY++ +
Sbjct: 30 VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQY 89
Query: 66 LDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 125
LD N+KL + +GLA+ H + ++HRD+K N+L+++
Sbjct: 90 LDDCGNIINMHNVKL-------FLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGEL 139
Query: 126 KIGDFGL--AKLFPDNITHITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIIS 182
K+ DFGL AK P T T Y P+ +LG + + D++ G + E+ +
Sbjct: 140 KLADFGLARAKSIP---TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMAT 196
Query: 183 GR 184
GR
Sbjct: 197 GR 198
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 15/182 (8%)
Query: 7 GRRIAVKPLSAESKQGVREFI-TEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNS 65
G+ AVK + ++ +G I EI L ++H N+V L LV + V
Sbjct: 47 GKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGE 106
Query: 66 L-DRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILL---DQ 121
L DR++ + S + + + +LH IVHRD+K N+L D+
Sbjct: 107 LFDRIVEKGFYTE-----KDASTLIRQVLDAVYYLHR---MGIVHRDLKPENLLYYSQDE 158
Query: 122 EFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 181
E I DFGL+K+ + + + GT GY+APE + + D +S GV+ ++
Sbjct: 159 ESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 216
Query: 182 SG 183
G
Sbjct: 217 CG 218
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 7 GRRIAVKPLS---AESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYE-YVE 62
G+ AVK +S + K + E+ L + HPN+ +L LV E Y
Sbjct: 51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTG 110
Query: 63 NNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLD-- 120
D ++ + + + + I + G+ + H+ IVHRD+K N+LL+
Sbjct: 111 GELFDEII-----SRKRFSEVDAARIIRQVLSGITYXHKN---KIVHRDLKPENLLLESK 162
Query: 121 -QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLE 179
++ N +I DFGL+ F + GT Y+APE VL G K DV+S GV++
Sbjct: 163 SKDANIRIIDFGLSTHF--EASKKXKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYI 219
Query: 180 IISG 183
++SG
Sbjct: 220 LLSG 223
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
EI+ ++RHPN+V + T +V EY L + A + + ++
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG----RFSEDEARFF 120
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP--KIGDFGLAKLFPDNITHITTR 146
+ G+++ H + HRD+K N LLD P KI DFG +K ++ H +
Sbjct: 121 FQQLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPK 174
Query: 147 -IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
GT Y+APE +L + K ADV+S GV + ++ G
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
EI+ ++RHPN+V + T ++ EY L + A + + ++
Sbjct: 66 EIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAG----RFSEDEARFF 121
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP--KIGDFGLAKLFPDNITHITTR 146
+ G+++ H I HRD+K N LLD P KI DFG +K ++ H +
Sbjct: 122 FQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPK 175
Query: 147 -IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
GT Y+APE +L + K ADV+S GV + ++ G
Sbjct: 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ K+ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ K+ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ K+ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
EI+ ++RHPN+V + T +V EY L + A + + ++
Sbjct: 64 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG----RFSEDEARFF 119
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP--KIGDFGLAKLFPDNITHITTR 146
+ G+++ H + HRD+K N LLD P KI DFG +K ++ H +
Sbjct: 120 FQQLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPK 173
Query: 147 -IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
GT Y+APE +L + K ADV+S GV + ++ G
Sbjct: 174 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENN 64
R +A+K LS +++ + E++ + V H N++ L+ Q + Y+
Sbjct: 44 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 103
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+D L + ++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 104 LMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 158
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
KI DFGLA+ + + T T Y APE +LG D++S G ++ E++ +
Sbjct: 159 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
Query: 185 --NSGKAMWGQMNKFL 198
G+ Q NK +
Sbjct: 217 ILFPGRDYIDQWNKVI 232
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ K+ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Query: 36 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 95
++HP++VEL+ +V+E+++ L ++ A + S I +
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 96 LAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTTG 152
L + H+ +I+HRD+K N+LL + N K+GDFG+A ++ R+ GT
Sbjct: 143 LRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV-GTPH 198
Query: 153 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
++APE V DV+ GV++ ++SG
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENN 64
R +A+K LS +++ + E++ + V H N++ L+ Q + Y+
Sbjct: 55 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 114
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+D L + ++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 115 LMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 169
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
KI DFGLA+ + + T T Y APE +LG D++S G ++ E++ +
Sbjct: 170 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
Query: 185 --NSGKAMWGQMNKFL 198
G+ Q NK +
Sbjct: 228 ILFPGRDYIDQWNKVI 243
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRR--ILVYEYVENNSLDRVLLG-ATKAN---IKLNW 82
EI L ++HPN++ L + R L+++Y E++ + A+KAN ++L
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 83 EKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP-----KIGDFGLAKLFP 137
+ I G+ +LH V +HRD+K +NIL+ E P KI D G A+LF
Sbjct: 128 GMVKSLLYQILDGIHYLHANWV---LHRDLKPANILVMGE-GPERGRVKIADMGFARLFN 183
Query: 138 DNITHIT--TRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIISG 183
+ + + T Y APE +LG + KA D+++ G + E+++
Sbjct: 184 SPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+++DQ+ K+ DFGLAK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 22/189 (11%)
Query: 6 NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQG------TRRILV 57
G ++A+K L +S+ + E+ L ++RH N++ L+ T LV
Sbjct: 49 TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV 108
Query: 58 YEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNI 117
++ + LG + KL ++ + + KGL ++H I+HRD+K N+
Sbjct: 109 MPFMGTD------LGKLMKHEKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNL 159
Query: 118 LLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVL 176
++++ KI DFGLA+ + T Y APE +L + T D++S G +
Sbjct: 160 AVNEDCELKILDFGLARQADSEMXGXVV----TRWYRAPEVILNWMRYTQTVDIWSVGCI 215
Query: 177 VLEIISGRN 185
+ E+I+G+
Sbjct: 216 MAEMITGKT 224
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T +AGT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLAGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 153
+G+ +LH ++HRD+K N+ L+ + + KIGDFGLA + T + GT Y
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNY 208
Query: 154 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
+APE + + + D++S G ++ ++ G+
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 88/191 (46%), Gaps = 18/191 (9%)
Query: 6 NGRRIAVK--PLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYE---- 59
G+++A+K P + + + + E+ L + +H N++ + R + Y
Sbjct: 78 TGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDIL----RPTVPYGEFKS 133
Query: 60 -YVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNIL 118
YV + ++ L ++ L E + +GL ++H ++HRD+K SN+L
Sbjct: 134 VYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLL 190
Query: 119 LDQEFNPKIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYVLG-GQLTMKADVYSFG 174
+++ KIGDFG+A+ P + T T Y APE +L + T D++S G
Sbjct: 191 VNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVG 250
Query: 175 VLVLEIISGRN 185
+ E+++ R
Sbjct: 251 CIFGEMLARRQ 261
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 88/191 (46%), Gaps = 18/191 (9%)
Query: 6 NGRRIAVK--PLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYE---- 59
G+++A+K P + + + + E+ L + +H N++ + R + Y
Sbjct: 79 TGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDIL----RPTVPYGEFKS 134
Query: 60 -YVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNIL 118
YV + ++ L ++ L E + +GL ++H ++HRD+K SN+L
Sbjct: 135 VYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLL 191
Query: 119 LDQEFNPKIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYVLG-GQLTMKADVYSFG 174
+++ KIGDFG+A+ P + T T Y APE +L + T D++S G
Sbjct: 192 VNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVG 251
Query: 175 VLVLEIISGRN 185
+ E+++ R
Sbjct: 252 CIFGEMLARRQ 262
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 92 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 151
I G +LH ++HRD+K N+ L+++ KIGDFGLA + T + GT
Sbjct: 130 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTP 185
Query: 152 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
Y+APE + + + DV+S G ++ ++ G+
Sbjct: 186 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 92 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 151
I G +LH ++HRD+K N+ L+++ KIGDFGLA + T + GT
Sbjct: 126 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTP 181
Query: 152 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
Y+APE + + + DV+S G ++ ++ G+
Sbjct: 182 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 92 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 151
I G +LH ++HRD+K N+ L+++ KIGDFGLA + T + GT
Sbjct: 126 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTP 181
Query: 152 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
Y+APE + + + DV+S G ++ ++ G+
Sbjct: 182 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+++DQ+ K+ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+++DQ+ K+ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+++DQ+ K+ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 11/136 (8%)
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 147
I V I K L LH +L ++HRD+K SN+L++ K DFG++ D++
Sbjct: 141 IAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID-- 196
Query: 148 AGTTGYLAPEYV---LGGQ-LTMKADVYSFGVLVLEIISGR---NSGKAMWGQMNKFLLE 200
AG Y APE + L + ++K+D++S G+ +E+ R +S + Q+ + + E
Sbjct: 197 AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEE 256
Query: 201 WAWQLHQEEKPLELVD 216
+ QL ++ E VD
Sbjct: 257 PSPQLPADKFSAEFVD 272
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+++DQ+ K+ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+++DQ+ K+ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+++DQ+ K+ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+++DQ+ ++ DFGLAK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
+ +K L + F +S + H +LV G C G ILV E+V+ SLD
Sbjct: 43 VLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLD-T 101
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 129
L K I + W + ++ +A + FL E ++H ++ A NILL +E + K G+
Sbjct: 102 YLKKNKNCINILW--KLEVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGN 156
Query: 130 FGLAKLFPDNITHITTR----IAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISG 183
KL I+ IT + ++ PE + + L + D +SFG + EI SG
Sbjct: 157 PPFIKLSDPGIS-ITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTG 152
+G+ +LH ++HRD+K N+ L+ + + KIGDFGLA K+ D + GT
Sbjct: 137 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKDLCGTPN 191
Query: 153 YLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
Y+APE + + + D++S G ++ ++ G+
Sbjct: 192 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTG 152
+G+ +LH ++HRD+K N+ L+ + + KIGDFGLA K+ D + GT
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKXLCGTPN 207
Query: 153 YLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
Y+APE + + + D++S G ++ ++ G+
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGATWTLCGTPEYLAPEIILSKGYNK 238
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 239 AVDWWALGVLIYEMAAG 255
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 7 GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL 66
G ++A K + + E EI ++ + H NL++L +LV EYV+ L
Sbjct: 114 GLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173
Query: 67 -DRVLLGATKANIKLNWEKRSDICV--GIAKGLAFLHEELVPHIVHRDIKASNIL-LDQE 122
DR++ + N + I I +G+ +H+ +I+H D+K NIL ++++
Sbjct: 174 FDRII------DESYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRD 224
Query: 123 FNP-KIGDFGLAKLF-PDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEI 180
KI DFGLA+ + P + GT +LAPE V ++ D++S GV+ +
Sbjct: 225 AKQIKIIDFGLARRYKPREKLKVNF---GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYML 281
Query: 181 ISGRNS--GKAMWGQMNKFLLEWAWQLHQEE 209
+SG + G +N +L W L EE
Sbjct: 282 LSGLSPFLGDNDAETLNN-ILACRWDLEDEE 311
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTG 152
+G+ +LH ++HRD+K N+ L+ + + KIGDFGLA K+ D + GT
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKDLCGTPN 207
Query: 153 YLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
Y+APE + + + D++S G ++ ++ G+
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
Query: 92 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR---IA 148
I G +LH ++HRD+K N+ L+++ KIGDFGLA + + R +
Sbjct: 150 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLAT----KVEYDGERKKVLC 202
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT Y+APE + + + DV+S G ++ ++ G+
Sbjct: 203 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 238
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
Query: 92 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR---IA 148
I G +LH ++HRD+K N+ L+++ KIGDFGLA + + R +
Sbjct: 148 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLAT----KVEYDGERKKVLC 200
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT Y+APE + + + DV+S G ++ ++ G+
Sbjct: 201 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 15/176 (8%)
Query: 12 VKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVL 70
+K S + + E+ L + HPN+++L LV E L D ++
Sbjct: 54 IKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII 113
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP---KI 127
L + + + I + G +LH+ +IVHRD+K N+LL+ + KI
Sbjct: 114 LRQKFSEVDA-----AVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKI 165
Query: 128 GDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
DFGL+ F + GT Y+APE VL + K DV+S GV++ ++ G
Sbjct: 166 VDFGLSAHF--EVGGKMKERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 157 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 212
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 213 AVDWWALGVLIYEMAAG 229
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
Query: 92 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR---IA 148
I G +LH ++HRD+K N+ L+++ KIGDFGLA + + R +
Sbjct: 124 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLAT----KVEYDGERKKVLC 176
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
GT Y+APE + + + DV+S G ++ ++ G+
Sbjct: 177 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 210
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 211 AVDWWALGVLIYEMAAG 227
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 210
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 211 AVDWWALGVLIYEMAAG 227
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 238
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 239 AVDWWALGVLIYEMAAG 255
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLAPEIILSKGYNK 203
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 204 AVDWWALGVLIYEMAAG 220
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 238
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 239 AVDWWALGVLIYEMAAG 255
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLAPEIILSKGYNK 218
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLXGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 119/292 (40%), Gaps = 44/292 (15%)
Query: 1 MGTLTNGR---RIAVKPLSAE--SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI 55
G + +GR +A++ + E ++ ++ F E+M RH N+V +G C+
Sbjct: 46 FGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA 105
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 115
++ + +L V+ A I L+ K I I KG+ +LH + I+H+D+K+
Sbjct: 106 IITSLCKGRTLYSVV---RDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSK 159
Query: 116 NILLDQEFNPK--IGDFGL---AKLFPDNITHITTRIA-GTTGYLAPEYVLGGQ------ 163
N+ D N K I DFGL + + RI G +LAPE +
Sbjct: 160 NVFYD---NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEED 216
Query: 164 ---LTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELG 220
+ +DV++ G + E+ + W + WQ+ KP L +G
Sbjct: 217 KLPFSKHSDVFALGTIWYELHARE------WPFKTQPAEAIIWQMGTGMKP-NLSQIGMG 269
Query: 221 EYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPGLF 272
+ + + FC RP +++ ML K + N L+ PG F
Sbjct: 270 KEISD-------ILLFCWAFEQEERPTFTKLMDMLEKLPKRN-RRLSHPGHF 313
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 15/176 (8%)
Query: 12 VKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVL 70
+K S + + E+ L + HPN+++L LV E L D ++
Sbjct: 37 IKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII 96
Query: 71 LGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP---KI 127
L + + + I + G +LH+ +IVHRD+K N+LL+ + KI
Sbjct: 97 LRQKFSEVDA-----AVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKI 148
Query: 128 GDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
DFGL+ F + GT Y+APE VL + K DV+S GV++ ++ G
Sbjct: 149 VDFGLSAHF--EVGGKMKERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENN 64
R +A+K LS +++ + E++ + V H N++ L+ Q + Y+
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+D L + ++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 110 LMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCT 164
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
KI DFGLA+ + + T Y APE +LG D++S G ++ E++ +
Sbjct: 165 LKILDFGLART--AGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
Query: 185 --NSGKAMWGQMNKFL 198
G+ Q NK +
Sbjct: 223 ILFPGRDYIDQWNKVI 238
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+++DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 14/159 (8%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
EI+ ++RHPN+V + T +V EY L + A + + ++
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG----RFSEDEARFF 120
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP--KIGDFGLAKLFPDNITHITTR 146
+ G+++ H + HRD+K N LLD P KI FG +K ++ H +
Sbjct: 121 FQQLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPK 174
Query: 147 -IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
GT Y+APE +L + K ADV+S GV + ++ G
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 14/159 (8%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 88
EI+ ++RHPN+V + T +V EY L + A + + ++
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG----RFSEDEARFF 120
Query: 89 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP--KIGDFGLAKLFPDNITHITTR 146
+ G+++ H + HRD+K N LLD P KI FG +K ++ H +
Sbjct: 121 FQQLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPK 174
Query: 147 -IAGTTGYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 183
GT Y+APE +L + K ADV+S GV + ++ G
Sbjct: 175 DTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 8 RRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENN 64
R +A+K LS +++ + E++ + V H N++ L+ Q + Y+
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 65 SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
+D L + ++L+ E+ S + + G+ LH I+HRD+K SNI++ +
Sbjct: 110 LMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCT 164
Query: 125 PKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 184
KI DFGLA+ + + T Y APE +LG D++S G ++ E++ +
Sbjct: 165 LKILDFGLART--AGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
Query: 185 --NSGKAMWGQMNKFL 198
G+ Q NK +
Sbjct: 223 ILFPGRDYIDQWNKVI 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ ++ +G
Sbjct: 218 AVDWWALGVLIYQMAAG 234
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Query: 37 RHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICV-GIAK 94
+HPN++ L G LV E + L D++L K E+ + + I K
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL------RQKFFSEREASFVLHTIGK 132
Query: 95 GLAFLHEELVPHIVHRDIKASNIL-LDQEFNP---KIGDFGLAK-LFPDNITHITTRIAG 149
+ +LH + V VHRD+K SNIL +D+ NP +I DFG AK L +N +T
Sbjct: 133 TVEYLHSQGV---VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP--CY 187
Query: 150 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
T ++APE + D++S G+L+ +++G
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 23 VREFITEIMTLSNVRHPNLVELIGCCVQGTRR--ILVYEYVENNSLDRV--LLGATKANI 78
+ + EI L + HPN+V+L+ +V+E V + V L ++
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 79 KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD 138
+ ++ + KG+ +LH + I+HRDIK SN+L+ ++ + KI DFG++ F
Sbjct: 140 RFYFQD-------LIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG 189
Query: 139 NITHITTRIAGTTGYLAPEYVLGGQ--LTMKA-DVYSFGVLVLEIISGR 184
+ ++ + GT ++APE + + + KA DV++ GV + + G+
Sbjct: 190 SDALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+D++ ++ DFG AK + T + GT YLAPE +L
Sbjct: 149 LIYRDLKPENLLIDEQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 204
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 205 AVDWWALGVLIYEMAAG 221
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 37 RHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKR-SDICVGIAK 94
+HPN++ L G +V E ++ L D++L K E+ S + I K
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL------RQKFFSEREASAVLFTITK 127
Query: 95 GLAFLHEELVPHIVHRDIKASNIL-LDQEFNP---KIGDFGLAK-LFPDNITHITTRIAG 149
+ +LH + V VHRD+K SNIL +D+ NP +I DFG AK L +N +T
Sbjct: 128 TVEYLHAQGV---VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP--CY 182
Query: 150 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
T ++APE + D++S GVL+ +++G
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Query: 37 RHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICV-GIAK 94
+HPN++ L G LV E + L D++L K E+ + + I K
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL------RQKFFSEREASFVLHTIGK 132
Query: 95 GLAFLHEELVPHIVHRDIKASNIL-LDQEFNP---KIGDFGLAK-LFPDNITHITTRIAG 149
+ +LH + V VHRD+K SNIL +D+ NP +I DFG AK L +N +T
Sbjct: 133 TVEYLHSQGV---VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP--CY 187
Query: 150 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
T ++APE + D++S G+L+ +++G
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+++DQ+ ++ DFG AK + T + GT YLAPE ++
Sbjct: 162 LIYRDLKPENLIIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIISKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
I K LSA Q + E ++HPN+V L + + LV++ V L
Sbjct: 62 INTKKLSARDFQKLER---EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFED 118
Query: 70 LLGATKANIKLNWEKRSDICVG-IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP--- 125
++ + E + C+ I + +A+ H IVHR++K N+LL +
Sbjct: 119 IVAR-----EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAV 170
Query: 126 KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
K+ DFGLA N + AGT GYL+PE + + D+++ GV++ ++ G
Sbjct: 171 KLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
I K LSA Q + E ++HPN+V L + + LV++ V L
Sbjct: 39 INTKKLSARDFQKLER---EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFED 95
Query: 70 LLGATKANIKLNWEKRSDICVG-IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP--- 125
++ + E + C+ I + +A+ H IVHR++K N+LL +
Sbjct: 96 IVAR-----EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAV 147
Query: 126 KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
K+ DFGLA N + AGT GYL+PE + + D+++ GV++ ++ G
Sbjct: 148 KLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
I K LSA Q + E ++HPN+V L + + LV++ V L
Sbjct: 38 INTKKLSARDFQKLER---EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFED 94
Query: 70 LLGATKANIKLNWEKRSDICVG-IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP--- 125
++ + E + C+ I + +A+ H IVHR++K N+LL +
Sbjct: 95 IVAR-----EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAV 146
Query: 126 KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
K+ DFGLA N + AGT GYL+PE + + D+++ GV++ ++ G
Sbjct: 147 KLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
I K LSA Q + E ++HPN+V L + + LV++ V L
Sbjct: 39 INTKKLSARDFQKLER---EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFED 95
Query: 70 LLGATKANIKLNWEKRSDICVG-IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP--- 125
++ + E + C+ I + +A+ H IVHR++K N+LL +
Sbjct: 96 IVAR-----EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAV 147
Query: 126 KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
K+ DFGLA N + AGT GYL+PE + + D+++ GV++ ++ G
Sbjct: 148 KLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 92 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 151
I KG+ ++H + +++RD+K SNI L KIGDFGL ++ R GT
Sbjct: 131 ITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR--XRSKGTL 185
Query: 152 GYLAPEYVLGGQLTMKADVYSFGVLVLEII 181
Y++PE + + D+Y+ G+++ E++
Sbjct: 186 RYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAP +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPAIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 20/184 (10%)
Query: 3 TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRH-PNLVELIGCCVQGTRRI--LVYE 59
+TN ++ VK L K ++ EI L N+R PN++ L R LV+E
Sbjct: 58 NITNNEKVVVKILKPVKKNKIKR---EIKILENLRGGPNIITLADIVKDPVSRTPALVFE 114
Query: 60 YVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILL 119
+V N ++ T +I+ I K L + H I+HRD+K N+++
Sbjct: 115 HVNNTDFKQLYQTLTDYDIRF-------YMYEILKALDYCHSM---GIMHRDVKPHNVMI 164
Query: 120 DQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL-TMKADVYSFGVLV 177
D E ++ D+GLA+ + + R+A + + PE ++ Q+ D++S G ++
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEY-NVRVA-SRYFKGPELLVDYQMYDYSLDMWSLGCML 222
Query: 178 LEII 181
+I
Sbjct: 223 ASMI 226
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 32/188 (17%)
Query: 3 TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVE 62
T +N +I++K +F E+ ++++++ + G ++YEY+E
Sbjct: 74 TKSNNDKISIK-------SKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYME 126
Query: 63 NNSLDR------VLLGATKANIKLNWEKRSDICV--GIAKGLAFLHEELVPHIVHRDIKA 114
N+S+ + VL I + K C+ + +++H E +I HRD+K
Sbjct: 127 NDSILKFDEYFFVLDKNYTCFIPIQVIK----CIIKSVLNSFSYIHNE--KNICHRDVKP 180
Query: 115 SNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG---YLAPEYVLGGQLT--MKAD 169
SNIL+D+ K+ DFG ++ D +I G+ G ++ PE+ K D
Sbjct: 181 SNILMDKNGRVKLSDFGESEYMVD------KKIKGSRGTYEFMPPEFFSNESSYNGAKVD 234
Query: 170 VYSFGVLV 177
++S G+ +
Sbjct: 235 IWSLGICL 242
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 28/172 (16%)
Query: 7 GRRIAVKPLSAES-KQGVR-EFITEIMTLSNVRHPNLVELIGCC---------VQGTRRI 55
G+++A+K + E+ K+G + EI L ++H N+V LI C +G+
Sbjct: 42 GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSI-Y 100
Query: 56 LVYEYVENNS---LDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDI 112
LV+++ E++ L VL+ T + IK + + GL ++H I+HRD+
Sbjct: 101 LVFDFCEHDLAGLLSNVLVKFTLSEIK-------RVMQMLLNGLYYIHRN---KILHRDM 150
Query: 113 KASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG---TTGYLAPEYVLG 161
KA+N+L+ ++ K+ DFGLA+ F R T Y PE +LG
Sbjct: 151 KAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLG 202
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 28/172 (16%)
Query: 7 GRRIAVKPLSAES-KQGVR-EFITEIMTLSNVRHPNLVELIGCC---------VQGTRRI 55
G+++A+K + E+ K+G + EI L ++H N+V LI C +G+
Sbjct: 43 GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSI-Y 101
Query: 56 LVYEYVENNS---LDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDI 112
LV+++ E++ L VL+ T + IK + + GL ++H I+HRD+
Sbjct: 102 LVFDFCEHDLAGLLSNVLVKFTLSEIK-------RVMQMLLNGLYYIHRN---KILHRDM 151
Query: 113 KASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG---TTGYLAPEYVLG 161
KA+N+L+ ++ K+ DFGLA+ F R T Y PE +LG
Sbjct: 152 KAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLG 203
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 18/161 (11%)
Query: 29 EIMTLSNVRHPNLVELIGCCVQGTRRI-LVYEYVENNSLDRVLLGATKANIKLNWEKRSD 87
+IM +N P +V+L C Q + + +V EY+ L ++ + ++ W K
Sbjct: 127 DIMAFAN--SPWVVQLF-CAFQDDKYLYMVMEYMPGGDLVNLM---SNYDVPEKWAKFYT 180
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTR 146
V +A L +H ++HRD+K N+LLD+ + K+ DFG K+ + H T
Sbjct: 181 AEVVLA--LDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA 235
Query: 147 IAGTTGYLAPEYVLG----GQLTMKADVYSFGVLVLEIISG 183
+ GT Y++PE + G + D +S GV + E++ G
Sbjct: 236 V-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 166
+++RD+K N+L+DQ+ ++ DFG AK + T + GT LAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEALAPEIILSKGYNK 217
Query: 167 KADVYSFGVLVLEIISG 183
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 28/172 (16%)
Query: 7 GRRIAVKPLSAES-KQGVR-EFITEIMTLSNVRHPNLVELIGCC---------VQGTRRI 55
G+++A+K + E+ K+G + EI L ++H N+V LI C +G+
Sbjct: 43 GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSI-Y 101
Query: 56 LVYEYVENNS---LDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDI 112
LV+++ E++ L VL+ T + IK + + GL ++H I+HRD+
Sbjct: 102 LVFDFCEHDLAGLLSNVLVKFTLSEIK-------RVMQMLLNGLYYIHRN---KILHRDM 151
Query: 113 KASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG---TTGYLAPEYVLG 161
KA+N+L+ ++ K+ DFGLA+ F R T Y PE +LG
Sbjct: 152 KAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLG 203
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 106 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLG---- 161
H VHRDIK N+LLD + ++ DFG D+ T ++ GT Y++PE +
Sbjct: 211 HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDG 270
Query: 162 -GQLTMKADVYSFGVLVLEIISG 183
G+ + D +S GV + E++ G
Sbjct: 271 MGKYGPECDWWSLGVCMYEMLYG 293
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 106 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLG---- 161
H VHRDIK N+LLD + ++ DFG D+ T ++ GT Y++PE +
Sbjct: 195 HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDG 254
Query: 162 -GQLTMKADVYSFGVLVLEIISG 183
G+ + D +S GV + E++ G
Sbjct: 255 MGKYGPECDWWSLGVCMYEMLYG 277
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 7 GRRIAVKPLSAES-KQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRI--------L 56
G+++A+K + E+ K+G + EI L ++H N+V LI C L
Sbjct: 43 GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYL 102
Query: 57 VYEYVENNS---LDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIK 113
V+++ E++ L VL+ T + IK + + GL ++H I+HRD+K
Sbjct: 103 VFDFCEHDLAGLLSNVLVKFTLSEIK-------RVMQMLLNGLYYIHRN---KILHRDMK 152
Query: 114 ASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG---TTGYLAPEYVLG 161
A+N+L+ ++ K+ DFGLA+ F R T Y PE +LG
Sbjct: 153 AANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLG 203
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 14/152 (9%)
Query: 37 RHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKG 95
+HPN++ L G +V E + L D++L + + S + I K
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF-----FSEREASAVLFTITKT 128
Query: 96 LAFLHEELVPHIVHRDIKASNIL-LDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTT 151
+ +LH + V VHRD+K SNIL +D+ NP +I DFG AK + T T
Sbjct: 129 VEYLHAQGV---VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TA 184
Query: 152 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
++APE + D++S GVL+ ++G
Sbjct: 185 NFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 7/151 (4%)
Query: 36 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 95
++HP++VEL+ +V+E+++ L ++ A + S I +
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 144
Query: 96 LAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTTG 152
L + H+ +I+HRD+K +LL + N K+G FG+A ++ R+ GT
Sbjct: 145 LRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPH 200
Query: 153 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
++APE V DV+ GV++ ++SG
Sbjct: 201 FMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 7/151 (4%)
Query: 36 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 95
++HP++VEL+ +V+E+++ L ++ A + S I +
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 96 LAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTTG 152
L + H+ +I+HRD+K +LL + N K+G FG+A ++ R+ GT
Sbjct: 143 LRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPH 198
Query: 153 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
++APE V DV+ GV++ ++SG
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 22/165 (13%)
Query: 28 TEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK---ANIKLNWEK 84
TEI L + HP +++ I +V E +E L ++G + A KL + +
Sbjct: 64 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 85 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNIT 141
+ + +LHE I+HRD+K N+LL +++ KI DFG +K+ + T
Sbjct: 123 -------MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--T 170
Query: 142 HITTRIAGTTGYLAPEYVLG---GQLTMKADVYSFGVLVLEIISG 183
+ + GT YLAPE ++ D +S GV++ +SG
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 22/165 (13%)
Query: 28 TEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK---ANIKLNWEK 84
TEI L + HP +++ I +V E +E L ++G + A KL + +
Sbjct: 64 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 85 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNIT 141
+ + +LHE I+HRD+K N+LL + KI DFG +K+ + T
Sbjct: 123 -------MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--T 170
Query: 142 HITTRIAGTTGYLAPEYVLG---GQLTMKADVYSFGVLVLEIISG 183
+ + GT YLAPE ++ D +S GV++ +SG
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 22/165 (13%)
Query: 28 TEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK---ANIKLNWEK 84
TEI L + HP +++ I +V E +E L ++G + A KL + +
Sbjct: 64 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 85 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNIT 141
+ + +LHE I+HRD+K N+LL +++ KI DFG +K+ + T
Sbjct: 123 -------MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--T 170
Query: 142 HITTRIAGTTGYLAPEYVLG---GQLTMKADVYSFGVLVLEIISG 183
+ + GT YLAPE ++ D +S GV++ +SG
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 22/165 (13%)
Query: 28 TEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK---ANIKLNWEK 84
TEI L + HP +++ I +V E +E L ++G + A KL + +
Sbjct: 70 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 128
Query: 85 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNIT 141
+ + +LHE I+HRD+K N+LL +++ KI DFG +K+ + T
Sbjct: 129 -------MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--T 176
Query: 142 HITTRIAGTTGYLAPEYVLG---GQLTMKADVYSFGVLVLEIISG 183
+ + GT YLAPE ++ D +S GV++ +SG
Sbjct: 177 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 22/165 (13%)
Query: 28 TEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK---ANIKLNWEK 84
TEI L + HP +++ I +V E +E L ++G + A KL + +
Sbjct: 63 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 121
Query: 85 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNIT 141
+ + +LHE I+HRD+K N+LL + KI DFG +K+ + T
Sbjct: 122 -------MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--T 169
Query: 142 HITTRIAGTTGYLAPEYVLG---GQLTMKADVYSFGVLVLEIISG 183
+ + GT YLAPE ++ D +S GV++ +SG
Sbjct: 170 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 22/165 (13%)
Query: 28 TEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK---ANIKLNWEK 84
TEI L + HP +++ I +V E +E L ++G + A KL + +
Sbjct: 189 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 247
Query: 85 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNIT 141
+ + +LHE I+HRD+K N+LL + KI DFG +K+ + T
Sbjct: 248 -------MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--T 295
Query: 142 HITTRIAGTTGYLAPEYVLG---GQLTMKADVYSFGVLVLEIISG 183
+ + GT YLAPE ++ D +S GV++ +SG
Sbjct: 296 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 22/165 (13%)
Query: 28 TEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK---ANIKLNWEK 84
TEI L + HP +++ I +V E +E L ++G + A KL + +
Sbjct: 203 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 261
Query: 85 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNIT 141
+ + +LHE I+HRD+K N+LL +++ KI DFG +K+ + T
Sbjct: 262 -------MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--T 309
Query: 142 HITTRIAGTTGYLAPEYVLG---GQLTMKADVYSFGVLVLEIISG 183
+ + GT YLAPE ++ D +S GV++ +SG
Sbjct: 310 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 106/263 (40%), Gaps = 40/263 (15%)
Query: 7 GRRIAVKPLSAE--SKQGVREFITEIMTLSNVRHPNLVELIGCCVQ--GTRRILVYEYVE 62
G I VK L S + R+F E L HPN++ ++G C L+ ++
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92
Query: 63 NNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQE 122
SL VL T N ++ + + +A+G+AFLH L P I + + ++++D++
Sbjct: 93 YGSLYNVLHEGT--NFVVDQSQAVKFALDMARGMAFLHT-LEPLIPRHALNSRSVMIDED 149
Query: 123 FNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMK--------ADVYSFG 174
+I ++ + AP +V L K AD++SF
Sbjct: 150 MTARI-----------SMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFA 198
Query: 175 VLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVA 234
VL+ E+++ R A M + + LE + P + PP K+
Sbjct: 199 VLLWELVT-REVPFADLSNMEIGM----------KVALEGLRPTI---PPGISPHVSKLM 244
Query: 235 FFCTQAAASRRPQMNQVIKMLTK 257
C ++RP+ + ++ +L K
Sbjct: 245 KICMNEDPAKRPKFDMIVPILEK 267
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 106 HIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTGYLAPEYVLG--- 161
H VHRDIK NIL+D + ++ DFG KL D + + GT Y++PE +
Sbjct: 195 HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV-GTPDYISPEILQAMEG 253
Query: 162 --GQLTMKADVYSFGVLVLEIISG 183
G+ + D +S GV + E++ G
Sbjct: 254 GKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 20/148 (13%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 149
+ LA++H I HRDIK N+LLD + K+ DFG AK N+++I +R
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 187
Query: 150 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR-----NSGKAMWGQMNKFLLEWAW 203
Y APE + G T DV+S G ++ E++ G+ +SG ++ K L
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 204 QLHQEEKP--LELVDPELGEYPPNEIIR 229
+ +E P E P++ +P ++ R
Sbjct: 245 EQIREMNPNYTEFAFPQIKAHPWTKVFR 272
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 149
+ LA++H I HRDIK N+LLD + K+ DFG AK N+++I +R
Sbjct: 167 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 221
Query: 150 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 184
Y APE + G T DV+S G ++ E++ G+
Sbjct: 222 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 149
+ LA++H I HRDIK N+LLD + K+ DFG AK N+++I +R
Sbjct: 169 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 223
Query: 150 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 184
Y APE + G T DV+S G ++ E++ G+
Sbjct: 224 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 149
+ LA++H I HRDIK N+LLD + K+ DFG AK N+++I +R
Sbjct: 171 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 225
Query: 150 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 184
Y APE + G T DV+S G ++ E++ G+
Sbjct: 226 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 149
+ LA++H I HRDIK N+LLD + K+ DFG AK N+++I +R
Sbjct: 161 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 215
Query: 150 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 184
Y APE + G T DV+S G ++ E++ G+
Sbjct: 216 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 149
+ LA++H I HRDIK N+LLD + K+ DFG AK N+++I +R
Sbjct: 212 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 266
Query: 150 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 184
Y APE + G T DV+S G ++ E++ G+
Sbjct: 267 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 149
+ LA++H I HRDIK N+LLD + K+ DFG AK N+++I +R
Sbjct: 138 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 192
Query: 150 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 184
Y APE + G T DV+S G ++ E++ G+
Sbjct: 193 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 149
+ LA++H I HRDIK N+LLD + K+ DFG AK N+++I +R
Sbjct: 146 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 200
Query: 150 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 184
Y APE + G T DV+S G ++ E++ G+
Sbjct: 201 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 149
+ LA++H I HRDIK N+LLD + K+ DFG AK N+++I +R
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 187
Query: 150 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 184
Y APE + G T DV+S G ++ E++ G+
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 18/111 (16%)
Query: 96 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--- 152
LA LH + +VH D+K +NI L K+GDFGL + + T AG
Sbjct: 170 LAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGL-------LVELGTAGAGEVQEGD 219
Query: 153 --YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFLL 199
Y+APE +L G ADV+S G+ +LE+ G W Q+ + L
Sbjct: 220 PRYMAPE-LLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYL 269
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 149
+ LA++H I HRDIK N+LLD + K+ DFG AK N+++I +R
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 187
Query: 150 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 184
Y APE + G T DV+S G ++ E++ G+
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 25/184 (13%)
Query: 9 RIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-- 66
R A K + + V F EI + ++ HPN++ L T LV E L
Sbjct: 53 RRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFE 112
Query: 67 ----DRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILL--D 120
RV + A I + + +A+ H+ ++ HRD+K N L D
Sbjct: 113 RVVHKRVFRESDAARIMKD----------VLSAVAYCHKL---NVAHRDLKPENFLFLTD 159
Query: 121 QEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLE 179
+P K+ DFGLA F + T++ GT Y++P+ VL G + D +S GV++
Sbjct: 160 SPDSPLKLIDFGLAARFKPG-KMMRTKV-GTPYYVSPQ-VLEGLYGPECDEWSAGVMMYV 216
Query: 180 IISG 183
++ G
Sbjct: 217 LLCG 220
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 25/184 (13%)
Query: 9 RIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-- 66
R A K + + V F EI + ++ HPN++ L T LV E L
Sbjct: 36 RRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFE 95
Query: 67 ----DRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILL--D 120
RV + A I + + +A+ H+ ++ HRD+K N L D
Sbjct: 96 RVVHKRVFRESDAARIMKD----------VLSAVAYCHKL---NVAHRDLKPENFLFLTD 142
Query: 121 QEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLE 179
+P K+ DFGLA F + T++ GT Y++P+ VL G + D +S GV++
Sbjct: 143 SPDSPLKLIDFGLAARFKPG-KMMRTKV-GTPYYVSPQ-VLEGLYGPECDEWSAGVMMYV 199
Query: 180 IISG 183
++ G
Sbjct: 200 LLCG 203
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 16/178 (8%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
I K LSA Q + E ++HPN+V L + LV++ V L
Sbjct: 64 INTKKLSARDHQKLER---EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFED 120
Query: 70 LLGATKANIKLNWEKRSDICVG-IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP--- 125
++ + E + C+ I + + +H+ IVHRD+K N+LL +
Sbjct: 121 IVAREYYS-----EADASHCIHQILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAV 172
Query: 126 KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
K+ DFGLA + AGT GYL+PE + D+++ GV++ ++ G
Sbjct: 173 KLADFGLA-IEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 82/184 (44%), Gaps = 37/184 (20%)
Query: 38 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK----ANIKLNWEKRS-DICVGI 92
HPN++ C + T R L Y +E +L+ L +K N+KL E + I
Sbjct: 68 HPNVIRYY--CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 124
Query: 93 AKGLAFLHEELVPHIVHRDIKASNILL--------DQEFNPK-----IGDFGLAKLFPDN 139
A G+A LH I+HRD+K NIL+ DQ+ + I DFGL K
Sbjct: 125 ASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 140 ITHITTRI---AGTTGYLAPEYV-------LGGQLTMKADVYSFGVLVLEIISGRNSGKA 189
+ T + +GT+G+ APE + +LT D++S G + I+S GK
Sbjct: 182 QSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS---KGKH 238
Query: 190 MWGQ 193
+G
Sbjct: 239 PFGD 242
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 15/183 (8%)
Query: 6 NGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNS 65
+ + AVK +S + ++ IT + HPN+V+L LV E +
Sbjct: 35 SNQAFAVKIISKRMEANTQKEITALKLCEG--HPNIVKLHEVFHDQLHTFLVMELLNGGE 92
Query: 66 L-DRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFN 124
L +R+ K + + S I + ++ +H+ V VHRD+K N+L E +
Sbjct: 93 LFERI-----KKKKHFSETEASYIMRKLVSAVSHMHDVGV---VHRDLKPENLLFTDEND 144
Query: 125 P---KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 181
KI DFG A+L P + + T T Y APE + D++S GV++ ++
Sbjct: 145 NLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNGYDESCDLWSLGVILYTML 203
Query: 182 SGR 184
SG+
Sbjct: 204 SGQ 206
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 19/205 (9%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQ----GTRRIL 56
T+++GR + + S K+ +RE I L++ HPN++ L V ++
Sbjct: 55 FNTVSDGRTVNILSDSFLCKRVLRE----IRLLNHFHHPNILGLRDIFVHFEEPAMHKLY 110
Query: 57 VYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
+ + L +V+ I ++ + I GL LHE V VHRD+ N
Sbjct: 111 LVTELMRTDLAQVI---HDQRIVISPQHIQYFMYHILLGLHVLHEAGV---VHRDLHPGN 164
Query: 117 ILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGV 175
ILL + I DF LA+ D T Y APE V+ + T D++S G
Sbjct: 165 ILLADNNDITICDFNLAR--EDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGC 222
Query: 176 LVLEIISGRN--SGKAMWGQMNKFL 198
++ E+ + + G + Q+NK +
Sbjct: 223 VMAEMFNRKALFRGSTFYNQLNKIV 247
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 5 TNGRRIAVKPLSAESKQGVREFITEIM-TLSNVRHPNLVELIGCCV---QGTRRIL---- 56
+ G +A+K + + + RE +IM L+ + HPN+V+L + RR +
Sbjct: 46 STGMSVAIKKVIQDPRFRNREL--QIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNV 103
Query: 57 VYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
V EYV + +L R + + + + + LH V ++ HRDIK N
Sbjct: 104 VMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV-NVCHRDIKPHN 161
Query: 117 ILLDQ-EFNPKIGDFGLA-KLFPD--NITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVY 171
+L+++ + K+ DFG A KL P N+ +I +R Y APE + G Q T D++
Sbjct: 162 VLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY-----YRAPELIFGNQHYTTAVDIW 216
Query: 172 SFGVLVLEIISGRN--SGKAMWGQMNKFL 198
S G + E++ G G GQ+++ +
Sbjct: 217 SVGCIFAEMMLGEPIFRGDNSAGQLHEIV 245
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 19/205 (9%)
Query: 1 MGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQ----GTRRIL 56
T+++GR + + S K+ +RE I L++ HPN++ L V ++
Sbjct: 55 FNTVSDGRTVNILSDSFLCKRVLRE----IRLLNHFHHPNILGLRDIFVHFEEPAMHKLY 110
Query: 57 VYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASN 116
+ + L +V+ I ++ + I GL LHE V VHRD+ N
Sbjct: 111 LVTELMRTDLAQVI---HDQRIVISPQHIQYFMYHILLGLHVLHEAGV---VHRDLHPGN 164
Query: 117 ILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGV 175
ILL + I DF LA+ D T Y APE V+ + T D++S G
Sbjct: 165 ILLADNNDITICDFNLAR--EDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGC 222
Query: 176 LVLEIISGRN--SGKAMWGQMNKFL 198
++ E+ + + G + Q+NK +
Sbjct: 223 VMAEMFNRKALFRGSTFYNQLNKIV 247
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 149
+ LA++H I HRDIK N+LLD + K+ DFG AK N++ I +R
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 187
Query: 150 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR-----NSGKAMWGQMNKFLLEWAW 203
Y APE + G T DV+S G ++ E++ G+ +SG ++ K L
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 204 QLHQEEKP--LELVDPELGEYPPNEIIR 229
+ +E P E P++ +P ++ R
Sbjct: 245 EQIREMNPNYTEFAFPQIKAHPWTKVFR 272
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 149
+ LA++H I HRDIK N+LLD + K+ DFG AK N++ I +R
Sbjct: 167 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 221
Query: 150 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 184
Y APE + G T DV+S G ++ E++ G+
Sbjct: 222 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 22/193 (11%)
Query: 2 GTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQ-GTRRILVYEY 60
L +A+K + + + RE +IM + V+HPN+V+L G ++ V+
Sbjct: 59 AKLVESDEVAIKKVLQDKRFKNREL--QIMRI--VKHPNVVDLKAFFYSNGDKKDEVFLN 114
Query: 61 VENNSLDRVLLGATKANIKLNWEKRSDIC----VGIAKGLAFLHEELVPHIVHRDIKASN 116
+ + + A++ KL + + + LA++H I HRDIK N
Sbjct: 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQN 171
Query: 117 ILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYVLGG-QLTMKADVY 171
+LLD K+ DFG AK+ N++ I +R Y APE + G T D++
Sbjct: 172 LLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-----YRAPELIFGATNYTTNIDIW 226
Query: 172 SFGVLVLEIISGR 184
S G ++ E++ G+
Sbjct: 227 STGCVMAELMQGQ 239
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 11/159 (6%)
Query: 29 EIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD 87
EI LS V H N+++++ QG ++++ ++ + LD L + +L+ S
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKH--GSGLD--LFAFIDRHPRLDEPLASY 134
Query: 88 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 147
I + + +L + I+HRDIK NI++ ++F K+ DFG A T
Sbjct: 135 IFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT--F 189
Query: 148 AGTTGYLAPEYVLGGQLT-MKADVYSFGVLVLEIISGRN 185
GT Y APE ++G + +++S GV + ++ N
Sbjct: 190 CGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEEN 228
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 149
+ LA++H I HRDIK N+LLD + K+ DFG AK N++ I +R
Sbjct: 145 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 199
Query: 150 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 184
Y APE + G T DV+S G ++ E++ G+
Sbjct: 200 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 149
+ LA++H I HRDIK N+LLD + K+ DFG AK N++ I +R
Sbjct: 141 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 195
Query: 150 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 184
Y APE + G T DV+S G ++ E++ G+
Sbjct: 196 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 149
+ LA++H I HRDIK N+LLD + K+ DFG AK N++ I +R
Sbjct: 152 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 206
Query: 150 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 184
Y APE + G T DV+S G ++ E++ G+
Sbjct: 207 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 149
+ LA++H I HRDIK N+LLD + K+ DFG AK N++ I +R
Sbjct: 145 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 199
Query: 150 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 184
Y APE + G T DV+S G ++ E++ G+
Sbjct: 200 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 149
+ LA++H I HRDIK N+LLD + K+ DFG AK N++ I +R
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 187
Query: 150 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 184
Y APE + G T DV+S G ++ E++ G+
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 149
+ LA++H I HRDIK N+LLD + K+ DFG AK N++ I +R
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 187
Query: 150 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 184
Y APE + G T DV+S G ++ E++ G+
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 149
+ LA++H I HRDIK N+LLD + K+ DFG AK N++ I +R
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 187
Query: 150 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 184
Y APE + G T DV+S G ++ E++ G+
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 149
+ LA++H I HRDIK N+LLD + K+ DFG AK N++ I +R
Sbjct: 134 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 188
Query: 150 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 184
Y APE + G T DV+S G ++ E++ G+
Sbjct: 189 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 94 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 149
+ LA++H I HRDIK N+LLD + K+ DFG AK N++ I +R
Sbjct: 137 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 191
Query: 150 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 184
Y APE + G T DV+S G ++ E++ G+
Sbjct: 192 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 63/139 (45%), Gaps = 15/139 (10%)
Query: 95 GLAFLHEELVPHIVHRDIKASNILLDQ-----EFNPKIGDFGLAKLFPDNITHITTR--I 147
GLA LH +IVHRD+K NIL+ + I DFGL K + R +
Sbjct: 130 GLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
Query: 148 AGTTGYLAPEYV---LGGQLTMKADVYSFGVLVLEIISGRNS--GKAMWGQMNKFLLEWA 202
GT G++APE + T D++S G + +IS + GK++ Q N L +
Sbjct: 187 PGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACS 246
Query: 203 WQLHQEEKPLELVDPELGE 221
EK +++ EL E
Sbjct: 247 LDCLHPEKHEDVIARELIE 265
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 14/177 (7%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
I K LSA Q + E ++HPN+V L + LV++ V L
Sbjct: 37 INTKKLSARDHQKLER---EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFED 93
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP---K 126
+ + + +D I + L ++ + IVHRD+K N+LL + K
Sbjct: 94 I-------VAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVK 146
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
+ DFGLA + AGT GYL+PE + D+++ GV++ ++ G
Sbjct: 147 LADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 80/180 (44%), Gaps = 33/180 (18%)
Query: 38 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK----ANIKLNWEKRS-DICVGI 92
HPN++ C + T R L Y +E +L+ L +K N+KL E + I
Sbjct: 86 HPNVIRYY--CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 142
Query: 93 AKGLAFLHEELVPHIVHRDIKASNILL--------DQEFNPK-----IGDFGLAKLFPDN 139
A G+A LH I+HRD+K NIL+ DQ+ + I DFGL K
Sbjct: 143 ASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 140 ITHITTRI---AGTTGYLAPEYV---LGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQ 193
+ +GT+G+ APE + +LT D++S G + I+S GK +G
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS---KGKHPFGD 256
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 16/178 (8%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
I K LSA Q + E ++HPN+V L + L+++ V L
Sbjct: 55 INTKKLSARDHQKLER---EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFED 111
Query: 70 LLGATKANIKLNWEKRSDICVG-IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP--- 125
++ + E + C+ I + + H+ V VHRD+K N+LL +
Sbjct: 112 IVAREYYS-----EADASHCIQQILEAVLHCHQMGV---VHRDLKPENLLLASKLKGAAV 163
Query: 126 KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
K+ DFGLA + + AGT GYL+PE + D+++ GV++ ++ G
Sbjct: 164 KLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 80/180 (44%), Gaps = 33/180 (18%)
Query: 38 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK----ANIKLNWEKRS-DICVGI 92
HPN++ C + T R L Y +E +L+ L +K N+KL E + I
Sbjct: 86 HPNVIRYY--CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 142
Query: 93 AKGLAFLHEELVPHIVHRDIKASNILL--------DQEFNPK-----IGDFGLAKLFPDN 139
A G+A LH I+HRD+K NIL+ DQ+ + I DFGL K
Sbjct: 143 ASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 140 ITHITTRI---AGTTGYLAPEYV---LGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQ 193
+ +GT+G+ APE + +LT D++S G + I+S GK +G
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS---KGKHPFGD 256
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 14/177 (7%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
I K LSA Q + E ++HPN+V L + LV++ V L
Sbjct: 37 INTKKLSARDHQKLER---EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFED 93
Query: 70 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP---K 126
++ + +D I + L ++ + IVHRD+K N+LL + K
Sbjct: 94 IVAR-------EYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVK 146
Query: 127 IGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
+ DFGLA + AGT GYL+PE + D+++ GV++ ++ G
Sbjct: 147 LADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 75/172 (43%), Gaps = 22/172 (12%)
Query: 27 ITEIMTLSNVRHPNLVELIGC----CVQGTRRILVYEYVENNSLDRVLLGATKANIKLNW 82
+ EI L + +H N++ + + + + + + L RV+ ++ + +
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY 116
Query: 83 EKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH 142
+ + LH +++HRD+K SN+L++ + K+ DFGLA++ ++
Sbjct: 117 -----FIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 143 IT---------TRIAGTTGYLAPEYVL-GGQLTMKADVYSFGVLVLEIISGR 184
+ T T Y APE +L + + DV+S G ++ E+ R
Sbjct: 169 NSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 75/172 (43%), Gaps = 22/172 (12%)
Query: 27 ITEIMTLSNVRHPNLVELIGC----CVQGTRRILVYEYVENNSLDRVLLGATKANIKLNW 82
+ EI L + +H N++ + + + + + + L RV+ ++ + +
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY 116
Query: 83 EKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH 142
+ + LH +++HRD+K SN+L++ + K+ DFGLA++ ++
Sbjct: 117 -----FIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 143 IT---------TRIAGTTGYLAPEYVL-GGQLTMKADVYSFGVLVLEIISGR 184
+ T T Y APE +L + + DV+S G ++ E+ R
Sbjct: 169 NSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 95 GLAFLHEELVPHIVHRDIKASNILLDQEFNP------KIGDFGLAKLFPDNITHITTRIA 148
GL ++H I+H DIK N+L++ +P KI D G A + + H T I
Sbjct: 143 GLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE---HYTNSIQ 197
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
T Y +PE +LG AD++S L+ E+I+G
Sbjct: 198 -TREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 95 GLAFLHEELVPHIVHRDIKASNILLDQEFNP------KIGDFGLAKLFPDNITHITTRIA 148
GL ++H I+H DIK N+L++ +P KI D G A + + H T I
Sbjct: 143 GLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE---HYTNSIQ 197
Query: 149 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
T Y +PE +LG AD++S L+ E+I+G
Sbjct: 198 -TREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 69/169 (40%), Gaps = 29/169 (17%)
Query: 29 EIMTLSNVRHPNLVELIGCCV--QGTRRILVYEYV---ENNSLDRVLLGATKANIKLNWE 83
EI L +RH N+++L+ + + +V EY LD V E
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVP------------E 103
Query: 84 KRSDIC------VGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 137
KR +C + GL +LH + IVH+DIK N+LL KI G+A+
Sbjct: 104 KRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALH 160
Query: 138 DNITHITTRIAGTTGYLAPEYVLGGQLT---MKADVYSFGVLVLEIISG 183
T R + + P + G T K D++S GV + I +G
Sbjct: 161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 17/186 (9%)
Query: 5 TNGRRIAVKPLSAESK-QGVR-EFITEIMTLSNVRH-PNLVELIGCCVQGTRRILVYEYV 61
+ G+ A K L + Q R E + EI L + P ++ L + IL+ EY
Sbjct: 52 STGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYA 111
Query: 62 ENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQ 121
+ + L + N R + I +G+ +LH+ +IVH D+K NILL
Sbjct: 112 AGGEIFSLCLPELAEMVSENDVIR--LIKQILEGVYYLHQN---NIVHLDLKPQNILLSS 166
Query: 122 EF---NPKIGDFGLAKLFPDNITHITT--RIAGTTGYLAPEYVLGGQLTMKADVYSFGVL 176
+ + KI DFG+++ I H I GT YLAPE + +T D+++ G++
Sbjct: 167 IYPLGDIKIVDFGMSR----KIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGII 222
Query: 177 VLEIIS 182
+++
Sbjct: 223 AYMLLT 228
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 56 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 115
++ EYV + +L +VL ++ + S + + + F+H I HRDIK
Sbjct: 115 VIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL---GICHRDIKPQ 170
Query: 116 NILLDQEFNP-KIGDFGLA-KLFPD--NITHITTRIAGTTGYLAPEYVLGG-QLTMKADV 170
N+L++ + N K+ DFG A KL P ++ I +R Y APE +LG + T D+
Sbjct: 171 NLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRF-----YRAPELMLGATEYTPSIDL 225
Query: 171 YSFGVLVLEIISGR 184
+S G + E+I G+
Sbjct: 226 WSIGCVFGELILGK 239
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 107 IVHRDIKASNILLDQEFNP--KIGDFGLAKLFPDNI-THITTRIAGTTGYLAPEYVLGGQ 163
I+H D+K NILL Q+ K+ DFG + + T I +R Y APE +LG +
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-----YRAPEVILGAR 275
Query: 164 LTMKADVYSFGVLVLEIISG 183
M D++S G ++ E+++G
Sbjct: 276 YGMPIDMWSLGCILAELLTG 295
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 107 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL- 164
+VHRDIK NIL+D + K+ DFG L D T GT Y PE++ Q
Sbjct: 160 VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE---PYTDFDGTRVYSPPEWISRHQYH 216
Query: 165 TMKADVYSFGVLVLEIISG 183
+ A V+S G+L+ +++ G
Sbjct: 217 ALPATVWSLGILLYDMVCG 235
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 107 IVHRDIKASNILLDQEFNP--KIGDFGLAKLFPDNI-THITTRIAGTTGYLAPEYVLGGQ 163
I+H D+K NILL Q+ K+ DFG + + T I +R Y APE +LG +
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-----YRAPEVILGAR 275
Query: 164 LTMKADVYSFGVLVLEIISG 183
M D++S G ++ E+++G
Sbjct: 276 YGMPIDMWSLGCILAELLTG 295
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTGYLAPEYVLG---- 161
+HRD+K N+LLD+ + K+ DFG K+ + + T + GT Y++PE +
Sbjct: 189 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGD 247
Query: 162 GQLTMKADVYSFGVLVLEIISG 183
G + D +S GV + E++ G
Sbjct: 248 GYYGRECDWWSVGVFLYEMLVG 269
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%)
Query: 108 VHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMK 167
HRD+K NIL+ + + DFG+A D GT Y APE T +
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 168 ADVYSFGVLVLEIISG 183
AD+Y+ ++ E ++G
Sbjct: 216 ADIYALTCVLYECLTG 231
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTGYLAPEYVLG---- 161
+HRD+K N+LLD+ + K+ DFG K+ + + T + GT Y++PE +
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGD 252
Query: 162 GQLTMKADVYSFGVLVLEIISG 183
G + D +S GV + E++ G
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVG 274
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 107 IVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTGYLAPEYVLG---- 161
+HRD+K N+LLD+ + K+ DFG K+ + + T + GT Y++PE +
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGD 252
Query: 162 GQLTMKADVYSFGVLVLEIISG 183
G + D +S GV + E++ G
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVG 274
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 16/178 (8%)
Query: 10 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 69
I K LSA Q + E ++HPN+V L + L+++ V L
Sbjct: 44 INTKKLSARDHQKLER---EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFED 100
Query: 70 LLGATKANIKLNWEKRSDICVG-IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP--- 125
++ + E + C+ I + + H+ V VHR++K N+LL +
Sbjct: 101 IVAREYYS-----EADASHCIQQILEAVLHCHQMGV---VHRNLKPENLLLASKLKGAAV 152
Query: 126 KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 183
K+ DFGLA + + AGT GYL+PE + D+++ GV++ ++ G
Sbjct: 153 KLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 80/184 (43%), Gaps = 37/184 (20%)
Query: 38 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK----ANIKLNWEKRS-DICVGI 92
HPN++ C + T R L Y +E +L+ L +K N+KL E + I
Sbjct: 68 HPNVIRYY--CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 124
Query: 93 AKGLAFLHEELVPHIVHRDIKASNILL--------DQEFNPK-----IGDFGLAKLFPDN 139
A G+A LH I+HRD+K NIL+ DQ+ + I DFGL K
Sbjct: 125 ASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 140 ITHITTRI---AGTTGYLAPEYV-------LGGQLTMKADVYSFGVLVLEIISGRNSGKA 189
+ +GT+G+ APE + +LT D++S G + I+S GK
Sbjct: 182 QXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS---KGKH 238
Query: 190 MWGQ 193
+G
Sbjct: 239 PFGD 242
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 74/172 (43%), Gaps = 22/172 (12%)
Query: 27 ITEIMTLSNVRHPNLVELIGC----CVQGTRRILVYEYVENNSLDRVLLGATKANIKLNW 82
+ EI L + +H N++ + + + + + + L RV+ ++ + +
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY 116
Query: 83 EKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH 142
+ + LH +++HRD+K SN+L++ + K+ DFGLA++ ++
Sbjct: 117 -----FIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 143 IT---------TRIAGTTGYLAPEYVL-GGQLTMKADVYSFGVLVLEIISGR 184
+ T Y APE +L + + DV+S G ++ E+ R
Sbjct: 169 NSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 21/145 (14%)
Query: 53 RRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDI 112
R LV+E + S+ L N + S + +A L FLH + I HRD+
Sbjct: 85 RFYLVFEKMRGGSI----LSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDL 137
Query: 113 KASNILLDQ--EFNP-KIGDFGLA---KLFPDNITHITTRI---AGTTGYLAPEYVLGGQ 163
K NIL + + +P KI DFGL KL D T + G+ Y+APE V
Sbjct: 138 KPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 164 -----LTMKADVYSFGVLVLEIISG 183
+ D++S GV++ ++SG
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 35/143 (24%)
Query: 67 DRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK 126
D L K I L E I + G F+HE I+HRD+K +N LL+Q+ + K
Sbjct: 113 DSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVK 169
Query: 127 IGDFGLAKLF-------------------PDN-------ITHITTRIAGTTGYLAPEYVL 160
+ DFGLA+ P N +H+ TR Y APE +L
Sbjct: 170 VCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTR-----WYRAPELIL 224
Query: 161 GGQ-LTMKADVYSFGVLVLEIIS 182
+ T D++S G + E+++
Sbjct: 225 LQENYTKSIDIWSTGCIFAELLN 247
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 14/119 (11%)
Query: 86 SDICVGIAKGLAFLHEELVPHIVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNITH 142
++I I + FLH +I HRD+K N+L +++ K+ DFG AK N
Sbjct: 112 AEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQ 168
Query: 143 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG-----RNSGKAMWGQMNK 196
T Y+APE + + D++S GV++ ++ G N+G+A+ M +
Sbjct: 169 TPCY---TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKR 224
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 17/154 (11%)
Query: 33 LSNVRH-PNLVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKANIKLNWEKRSDIC 89
L N+R PN++ L R LV+E+V N ++ T +I+
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-------YM 137
Query: 90 VGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRIA 148
I K L + H I+HRD+K N+L+D E ++ D+GLA+ + + R+A
Sbjct: 138 YEILKALDYCHSM---GIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVA 193
Query: 149 GTTGYLAPEYVLGGQL-TMKADVYSFGVLVLEII 181
+ + PE ++ Q+ D++S G ++ +I
Sbjct: 194 -SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 107 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 165
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 234
Query: 166 MK-ADVYSFGVLVLEIISG 183
+ A V+S G+L+ +++ G
Sbjct: 235 GRSAAVWSLGILLYDMVCG 253
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 14/119 (11%)
Query: 86 SDICVGIAKGLAFLHEELVPHIVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNITH 142
++I I + FLH +I HRD+K N+L +++ K+ DFG AK N
Sbjct: 131 AEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQ 187
Query: 143 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG-----RNSGKAMWGQMNK 196
T Y+APE + + D++S GV++ ++ G N+G+A+ M +
Sbjct: 188 TPCY---TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKR 243
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 74/188 (39%), Gaps = 26/188 (13%)
Query: 7 GRRIAVKPLSAE--SKQGVREFITEIMTLSNVRHPNLVELIGCCVQ--GTRRILVYEYVE 62
G I VK L S + R+F E L HPN++ ++G C L+ +
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXP 92
Query: 63 NNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQE 122
SL VL T N ++ + + A+G AFLH L P I + + ++ +D++
Sbjct: 93 YGSLYNVLHEGT--NFVVDQSQAVKFALDXARGXAFLH-TLEPLIPRHALNSRSVXIDED 149
Query: 123 FNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMK--------ADVYSFG 174
+I + + AP +V L K AD +SF
Sbjct: 150 XTARI-----------SXADVKFSFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFA 198
Query: 175 VLVLEIIS 182
VL+ E+++
Sbjct: 199 VLLWELVT 206
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 28/113 (24%)
Query: 95 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG---- 149
G F+HE I+HRD+K +N LL+Q+ + KI DFGLA+ + D HI +
Sbjct: 143 GEKFIHES---GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEEN 199
Query: 150 -------------------TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIIS 182
T Y APE +L + T D++S G + E+++
Sbjct: 200 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 107 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 165
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 190
Query: 166 MK-ADVYSFGVLVLEIISG 183
+ A V+S G+L+ +++ G
Sbjct: 191 GRSAAVWSLGILLYDMVCG 209
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 107 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 165
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 192
Query: 166 MK-ADVYSFGVLVLEIISG 183
+ A V+S G+L+ +++ G
Sbjct: 193 GRSAAVWSLGILLYDMVCG 211
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 107 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 165
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 219
Query: 166 MK-ADVYSFGVLVLEIISG 183
+ A V+S G+L+ +++ G
Sbjct: 220 GRSAAVWSLGILLYDMVCG 238
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 107 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 165
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 191
Query: 166 MK-ADVYSFGVLVLEIISG 183
+ A V+S G+L+ +++ G
Sbjct: 192 GRSAAVWSLGILLYDMVCG 210
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 107 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 165
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 192
Query: 166 MK-ADVYSFGVLVLEIISG 183
+ A V+S G+L+ +++ G
Sbjct: 193 GRSAAVWSLGILLYDMVCG 211
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 107 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 165
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 191
Query: 166 MK-ADVYSFGVLVLEIISG 183
+ A V+S G+L+ +++ G
Sbjct: 192 GRSAAVWSLGILLYDMVCG 210
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 107 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 165
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 206
Query: 166 MK-ADVYSFGVLVLEIISG 183
+ A V+S G+L+ +++ G
Sbjct: 207 GRSAAVWSLGILLYDMVCG 225
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 107 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 165
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 187
Query: 166 MK-ADVYSFGVLVLEIISG 183
+ A V+S G+L+ +++ G
Sbjct: 188 GRSAAVWSLGILLYDMVCG 206
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 107 IVHRDIKASNILLDQEFNP--KIGDFGLAKLFPDNI-THITTRIAGTTGYLAPEYVLGGQ 163
I+H D+K NILL Q+ K+ DFG + + I +R Y APE +LG +
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRF-----YRAPEVILGAR 275
Query: 164 LTMKADVYSFGVLVLEIISG 183
M D++S G ++ E+++G
Sbjct: 276 YGMPIDMWSLGCILAELLTG 295
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 107 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 165
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 220
Query: 166 MK-ADVYSFGVLVLEIISG 183
+ A V+S G+L+ +++ G
Sbjct: 221 GRSAAVWSLGILLYDMVCG 239
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 107 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 165
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 219
Query: 166 MK-ADVYSFGVLVLEIISG 183
+ A V+S G+L+ +++ G
Sbjct: 220 GRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 107 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 165
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 220
Query: 166 MK-ADVYSFGVLVLEIISG 183
+ A V+S G+L+ +++ G
Sbjct: 221 GRSAAVWSLGILLYDMVCG 239
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 107 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 165
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 239
Query: 166 MK-ADVYSFGVLVLEIISG 183
+ A V+S G+L+ +++ G
Sbjct: 240 GRSAAVWSLGILLYDMVCG 258
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 107 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 165
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 187
Query: 166 MK-ADVYSFGVLVLEIISG 183
+ A V+S G+L+ +++ G
Sbjct: 188 GRSAAVWSLGILLYDMVCG 206
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 107 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 165
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 234
Query: 166 MK-ADVYSFGVLVLEIISG 183
+ A V+S G+L+ +++ G
Sbjct: 235 GRSAAVWSLGILLYDMVCG 253
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 107 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 165
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 207
Query: 166 MK-ADVYSFGVLVLEIISG 183
+ A V+S G+L+ +++ G
Sbjct: 208 GRSAAVWSLGILLYDMVCG 226
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 107 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 165
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 207
Query: 166 MK-ADVYSFGVLVLEIISG 183
+ A V+S G+L+ +++ G
Sbjct: 208 GRSAAVWSLGILLYDMVCG 226
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 107 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 165
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 234
Query: 166 MK-ADVYSFGVLVLEIISG 183
+ A V+S G+L+ +++ G
Sbjct: 235 GRSAAVWSLGILLYDMVCG 253
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 107 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 165
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 206
Query: 166 MK-ADVYSFGVLVLEIISG 183
+ A V+S G+L+ +++ G
Sbjct: 207 GRSAAVWSLGILLYDMVCG 225
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 107 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 165
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 219
Query: 166 MK-ADVYSFGVLVLEIISG 183
+ A V+S G+L+ +++ G
Sbjct: 220 GRSAAVWSLGILLYDMVCG 238
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,345,227
Number of Sequences: 62578
Number of extensions: 338778
Number of successful extensions: 3170
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 187
Number of HSP's that attempted gapping in prelim test: 944
Number of HSP's gapped (non-prelim): 1104
length of query: 307
length of database: 14,973,337
effective HSP length: 99
effective length of query: 208
effective length of database: 8,778,115
effective search space: 1825847920
effective search space used: 1825847920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)