BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>021778
MESLYKKLYDKYDKLKKKKFSELDNLNKEQELKFTTYVNAADKYIEFLRSENEKLCAQVN
NLKSEVDSIRSTSNEQCLHYQKLLMEENQKNKALSEEVETLQKLLQEGTASSSKDDNNDN
MQLYTPEGAQPTSGNQSKEKTRKRRRKFGSESESECMITASSRGQDDAIEGQSAKDLSKE
NVSWGALLNEQLAECCKRTIDTSGGGENDSGPANCLFQALIEYLLGMKLSPYHESEGRCV
SALHQSTGYSFSLTWVKSKDGEEFELLYRVLSLGTLERVALGWMMDEIMFSTSMCPIFFE
RISGVIK

High Scoring Gene Products

Symbol, full name Information P value
TTN9
AT3G20070 		protein from Arabidopsis thaliana 9.8e-32

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  021778
        (307 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2087630 - symbol:TTN9 "AT3G20070" species:3702...   348  9.8e-32   1


>TAIR|locus:2087630 [details] [associations]
            symbol:TTN9 "AT3G20070" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0009793 "embryo development
            ending in seed dormancy" evidence=IMP] [GO:0009960 "endosperm
            development" evidence=IMP] EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0009793 GO:GO:0009960 EMBL:AP000383 EMBL:AY063778
            EMBL:AY123015 IPI:IPI00536568 RefSeq:NP_188642.2 RefSeq:NP_974342.1
            UniGene:At.6679 STRING:Q9LJZ4 PaxDb:Q9LJZ4 PRIDE:Q9LJZ4
            EnsemblPlants:AT3G20070.1 EnsemblPlants:AT3G20070.2 GeneID:821546
            KEGG:ath:AT3G20070 TAIR:At3g20070 eggNOG:NOG275001
            HOGENOM:HOG000090836 InParanoid:Q9LJZ4 OMA:CIVASHP PhylomeDB:Q9LJZ4
            ProtClustDB:CLSN2690555 ArrayExpress:Q9LJZ4 Genevestigator:Q9LJZ4
            Uniprot:Q9LJZ4
        Length = 282

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 94/267 (35%), Positives = 139/267 (52%)

Query:    43 KYIEFLRSENEKLCAQVNNLKSEVDSIRSTSNEQCLHYQKLLMEENQKNKALSEEVETLQ 102
             +Y E  + + EK    V+  +  ++ +R  +       +KL  E         ++    Q
Sbjct:    22 EYDEINKEQEEKFLTFVSASEELMEHLRGENQSSLEMVEKLRNEIISIRSGRDDKFLECQ 81

Query:   103 KLL-QEGTASSSKDDNNDNMQLYTPEGAQPTSGNQSKEKTRKRRRKFGSESESECMITAS 161
             KLL +E   + S  +    ++    E   P +      K +KR+    +   +  MI  S
Sbjct:    82 KLLMEEELKNKSLSEEVVKLKELVQE-EHPRNYEDQSGKKQKRKTPESARVTTRSMIKRS 140

Query:   162 SRGQDDAIEGQSAK-DLSKENVSWGALLNEQLAECCKRTIDTSGGGENDSGPANCLFQAL 220
              R  +D +E      D+SK + +   LL  Q  +CC+ T D S      S  A+C FQAL
Sbjct:   141 -RLSEDLVETDMVSPDISKHHKAKEPLLVSQ-PQCCRTTYDGS------SSSASCTFQAL 192

Query:   221 IEYLLGMKLSPYHESEGRCVSALHQSTGYSFSLTWVKSKDGEEFELLYRVLSLGTLERVA 280
              ++LLGMKLS  ++ +  C+ A H +TG SFSLT++ + +GEE ELLY+  SLGT +RVA
Sbjct:   193 GKHLLGMKLSTNNKGKRACIVASHPTTGLSFSLTFINNPNGEESELLYKPASLGTFQRVA 252

Query:   281 LGWMMDEIMFSTSMCPIFFERISGVIK 307
               WM + I FSTSMCPIFFER+S VIK
Sbjct:   253 PEWMREVIKFSTSMCPIFFERVSRVIK 279

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 52/119 (43%), Positives = 78/119 (65%)

Query:    20 FSELDNLNKEQELKFTTYVNAADKYIEFLRSENEKLCAQVNNLKSEVDSIRSTSNEQCLH 79
             +SE D +NKEQE KF T+V+A+++ +E LR EN+     V  L++E+ SIRS  +++ L 
Sbjct:    20 YSEYDEINKEQEEKFLTFVSASEELMEHLRGENQSSLEMVEKLRNEIISIRSGRDDKFLE 79

Query:    80 YQKLLMEENQKNKALSEEVETLQKLLQEGTASSSKDDNNDNMQLYTPEGAQPTSGNQSK 138
              QKLLMEE  KNK+LSEEV  L++L+QE    + +D +    +  TPE A+ T+ +  K
Sbjct:    80 CQKLLMEEELKNKSLSEEVVKLKELVQEEHPRNYEDQSGKKQKRKTPESARVTTRSMIK 138


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.311   0.127   0.354    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      307       291   0.00089  115 3  11 23  0.46    34
                                                     33  0.43    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  203 KB (2114 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  36.81u 0.11s 36.92t   Elapsed:  00:00:02
  Total cpu time:  36.81u 0.11s 36.92t   Elapsed:  00:00:02
  Start:  Mon May 20 22:12:48 2013   End:  Mon May 20 22:12:50 2013

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