Query 021782
Match_columns 307
No_of_seqs 167 out of 1301
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 09:13:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021782.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021782hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ty2_A 5'-nucleotidase SURE; s 100.0 1.2E-79 4.3E-84 569.0 21.8 248 9-297 6-257 (261)
2 2phj_A 5'-nucleotidase SURE; S 100.0 4.8E-79 1.6E-83 563.2 22.0 243 15-297 2-249 (251)
3 1j9j_A Stationary phase surviV 100.0 1.2E-78 3.9E-83 560.3 22.8 242 15-296 1-246 (247)
4 2wqk_A 5'-nucleotidase SURE; S 100.0 3.9E-78 1.3E-82 558.3 22.5 244 15-297 2-249 (251)
5 2v4n_A Multifunctional protein 100.0 5.1E-78 1.8E-82 557.8 23.0 241 14-297 1-246 (254)
6 1l5x_A SurviVal protein E; str 100.0 3.2E-76 1.1E-80 552.6 18.0 244 15-297 1-263 (280)
7 2e6c_A 5'-nucleotidase SURE; S 100.0 5.8E-76 2E-80 541.4 18.7 232 15-291 1-239 (244)
8 3oti_A CALG3; calicheamicin, T 94.4 0.099 3.4E-06 48.7 7.8 38 12-50 18-56 (398)
9 4amg_A Snogd; transferase, pol 94.0 0.2 6.9E-06 46.1 9.0 38 12-53 20-61 (400)
10 4fzr_A SSFS6; structural genom 93.6 0.035 1.2E-06 51.7 2.9 40 11-51 12-52 (398)
11 3tsa_A SPNG, NDP-rhamnosyltran 92.6 0.064 2.2E-06 49.5 3.3 37 14-51 1-38 (391)
12 2iyf_A OLED, oleandomycin glyc 92.5 0.36 1.2E-05 45.1 8.3 36 14-53 7-46 (430)
13 3otg_A CALG1; calicheamicin, T 92.2 0.26 8.9E-06 45.5 6.9 39 12-51 18-57 (412)
14 3ia7_A CALG4; glycosysltransfe 91.7 0.36 1.2E-05 44.2 7.1 36 15-51 5-41 (402)
15 3h4t_A Glycosyltransferase GTF 90.8 0.18 6.3E-06 47.4 4.3 37 15-52 1-38 (404)
16 3rsc_A CALG2; TDP, enediyne, s 90.4 0.51 1.7E-05 43.7 6.9 41 11-52 17-58 (415)
17 2iya_A OLEI, oleandomycin glyc 90.0 1.1 3.7E-05 41.9 8.8 38 13-54 11-52 (424)
18 3fro_A GLGA glycogen synthase; 86.2 1.1 3.8E-05 41.0 6.2 42 13-55 1-48 (439)
19 2iuy_A Avigt4, glycosyltransfe 78.1 1.3 4.5E-05 39.6 3.2 40 14-54 3-59 (342)
20 2r60_A Glycosyl transferase, g 72.6 4.3 0.00015 38.5 5.4 39 14-53 7-61 (499)
21 2gek_A Phosphatidylinositol ma 70.4 5.4 0.00019 36.0 5.3 44 11-55 17-65 (406)
22 3c48_A Predicted glycosyltrans 70.2 4.4 0.00015 37.4 4.7 42 11-53 17-70 (438)
23 1rzu_A Glycogen synthase 1; gl 64.6 3.4 0.00011 39.0 2.7 37 15-52 1-44 (485)
24 2yjn_A ERYCIII, glycosyltransf 64.1 5.6 0.00019 37.4 4.2 40 10-53 16-59 (441)
25 2iw1_A Lipopolysaccharide core 63.7 5 0.00017 35.8 3.6 37 15-52 1-41 (374)
26 3n7t_A Macrophage binding prot 63.2 6.2 0.00021 35.3 4.1 42 12-54 9-60 (247)
27 2qzs_A Glycogen synthase; glyc 63.1 3.8 0.00013 38.6 2.8 37 15-52 1-44 (485)
28 3kkl_A Probable chaperone prot 59.0 5.4 0.00018 35.6 2.9 40 14-54 5-54 (244)
29 4b4o_A Epimerase family protei 57.7 10 0.00035 33.4 4.5 29 15-49 1-31 (298)
30 1wd5_A Hypothetical protein TT 56.2 12 0.00043 31.9 4.7 42 12-54 118-160 (208)
31 2x6q_A Trehalose-synthase TRET 56.1 16 0.00055 33.3 5.7 40 12-53 38-81 (416)
32 3s2u_A UDP-N-acetylglucosamine 55.2 17 0.00059 33.4 5.8 31 15-49 3-37 (365)
33 3gpi_A NAD-dependent epimerase 54.4 16 0.00056 31.7 5.3 33 14-53 3-37 (286)
34 1f0k_A MURG, UDP-N-acetylgluco 52.3 11 0.00039 33.5 3.9 35 14-52 6-44 (364)
35 1rrv_A Glycosyltransferase GTF 48.0 12 0.0004 34.7 3.4 35 15-53 1-39 (416)
36 1iir_A Glycosyltransferase GTF 46.5 18 0.00061 33.5 4.4 35 15-53 1-39 (415)
37 4gi5_A Quinone reductase; prot 46.2 10 0.00034 34.7 2.5 43 5-48 10-59 (280)
38 2p6p_A Glycosyl transferase; X 45.8 10 0.00035 34.4 2.6 37 15-52 1-38 (384)
39 2x0d_A WSAF; GT4 family, trans 45.7 12 0.00041 35.3 3.1 41 11-52 43-89 (413)
40 2lpm_A Two-component response 41.6 17 0.00057 28.8 2.9 82 12-144 6-87 (123)
41 3l18_A Intracellular protease 40.7 23 0.00077 28.7 3.7 38 14-52 2-39 (168)
42 3ot1_A 4-methyl-5(B-hydroxyeth 38.4 31 0.0011 29.2 4.4 43 9-52 4-46 (208)
43 3ius_A Uncharacterized conserv 38.3 34 0.0012 29.5 4.7 30 14-50 5-36 (286)
44 1oi4_A Hypothetical protein YH 36.1 64 0.0022 26.8 5.9 40 14-54 23-62 (193)
45 4e08_A DJ-1 beta; flavodoxin-l 35.4 64 0.0022 26.6 5.8 36 16-52 7-42 (190)
46 3u27_C Microcompartments prote 35.1 13 0.00044 33.2 1.4 105 27-136 48-206 (220)
47 3grc_A Sensor protein, kinase; 33.1 29 0.00098 26.1 2.9 86 9-144 1-88 (140)
48 3lte_A Response regulator; str 31.5 29 0.001 25.7 2.7 30 9-41 1-30 (132)
49 2hy7_A Glucuronosyltransferase 31.4 37 0.0013 31.5 4.0 40 7-48 7-49 (406)
50 1u9c_A APC35852; structural ge 30.1 96 0.0033 26.1 6.1 31 23-54 24-54 (224)
51 2vrn_A Protease I, DR1199; cys 30.1 50 0.0017 27.1 4.2 40 13-53 8-47 (190)
52 3s28_A Sucrose synthase 1; gly 29.8 1.9E+02 0.0065 30.2 9.3 39 12-51 276-340 (816)
53 3dqp_A Oxidoreductase YLBE; al 29.5 2.3E+02 0.0078 23.1 13.6 104 15-144 1-106 (219)
54 3gfh_A Ethanolamine utilizatio 29.5 7.4 0.00025 34.9 -1.2 50 82-133 151-201 (225)
55 3vue_A GBSS-I, granule-bound s 28.9 36 0.0012 33.4 3.5 42 12-54 7-55 (536)
56 3okp_A GDP-mannose-dependent a 28.9 13 0.00044 33.3 0.2 38 13-53 3-45 (394)
57 2r85_A PURP protein PF1517; AT 28.2 56 0.0019 28.8 4.4 34 14-53 2-35 (334)
58 2iuf_A Catalase; oxidoreductas 28.1 22 0.00075 36.8 1.8 35 17-52 534-568 (688)
59 2pd4_A Enoyl-[acyl-carrier-pro 27.7 97 0.0033 26.8 5.9 36 12-51 4-41 (275)
60 3cwc_A Putative glycerate kina 27.4 1.7E+02 0.006 27.9 7.9 42 102-145 287-328 (383)
61 4g41_A MTA/SAH nucleosidase; m 26.5 2.3E+02 0.0079 23.9 8.0 46 126-171 181-231 (236)
62 2cve_A Hypothetical protein TT 24.5 51 0.0017 28.6 3.3 30 19-49 59-90 (191)
63 2geb_A Hypoxanthine-guanine ph 24.3 49 0.0017 27.6 3.1 44 12-56 96-140 (185)
64 3bsf_A AT4G34840, nucleosidase 24.2 2.1E+02 0.0073 24.7 7.5 52 125-176 190-248 (254)
65 1rw7_A YDR533CP; alpha-beta sa 24.2 45 0.0015 29.0 3.0 30 23-53 24-53 (243)
66 3ew7_A LMO0794 protein; Q8Y8U8 24.2 88 0.003 25.4 4.7 33 15-51 1-33 (221)
67 1z7g_A HGPRT, HGPRTASE, hypoxa 23.8 57 0.0019 28.1 3.5 42 13-55 125-167 (217)
68 1vi7_A Hypothetical protein YI 23.8 58 0.002 28.8 3.6 30 19-49 71-102 (217)
69 3to5_A CHEY homolog; alpha(5)b 23.7 63 0.0021 25.6 3.5 39 101-145 56-96 (134)
70 3eod_A Protein HNR; response r 23.4 61 0.0021 23.8 3.2 38 101-144 50-87 (130)
71 2h7i_A Enoyl-[acyl-carrier-pro 23.3 1.1E+02 0.0039 26.2 5.4 39 9-51 2-42 (269)
72 3ej6_A Catalase-3; heme, hydro 23.0 73 0.0025 32.9 4.6 39 14-53 537-576 (688)
73 3ono_A Ribose/galactose isomer 22.9 57 0.0019 28.9 3.3 89 14-142 3-95 (214)
74 2fex_A Conserved hypothetical 22.8 1.7E+02 0.0057 23.9 6.2 37 16-53 3-40 (188)
75 3t8y_A CHEB, chemotaxis respon 22.7 1.5E+02 0.005 23.0 5.6 37 102-145 71-107 (164)
76 1hgx_A HGXPRTASE, hypoxanthine 22.5 56 0.0019 27.1 3.1 43 12-55 93-136 (183)
77 2p91_A Enoyl-[acyl-carrier-pro 22.2 1.2E+02 0.004 26.4 5.3 38 9-50 16-55 (285)
78 3o4v_A MTA/SAH nucleosidase; m 22.1 1.5E+02 0.0051 25.2 5.9 50 125-174 177-231 (234)
79 2jbh_A Phosphoribosyltransfera 22.0 56 0.0019 28.3 3.1 42 13-55 133-175 (225)
80 1pzm_A HGPRT, hypoxanthine-gua 21.7 59 0.002 27.9 3.1 43 13-56 117-160 (211)
81 3l3b_A ES1 family protein; ssg 21.4 88 0.003 27.5 4.3 31 23-54 37-67 (242)
82 1lss_A TRK system potassium up 21.4 81 0.0028 23.6 3.6 33 14-51 4-36 (140)
83 1yfz_A Hypoxanthine-guanine ph 21.3 60 0.0021 27.5 3.1 44 12-56 116-160 (205)
84 2vyo_A ECU11_0510, chitooligos 21.2 58 0.002 28.6 3.1 35 12-47 23-57 (254)
85 1id1_A Putative potassium chan 21.1 85 0.0029 24.6 3.8 33 14-51 3-35 (153)
86 3h2s_A Putative NADH-flavin re 21.0 1.1E+02 0.0038 25.0 4.7 31 15-50 1-32 (224)
87 2rk3_A Protein DJ-1; parkinson 20.9 1.7E+02 0.0057 24.1 5.8 38 15-53 4-41 (197)
88 1qsg_A Enoyl-[acyl-carrier-pro 20.8 1.4E+02 0.0046 25.6 5.4 35 12-50 7-43 (265)
89 3beo_A UDP-N-acetylglucosamine 20.6 45 0.0015 29.6 2.2 19 122-142 289-307 (375)
90 2pn1_A Carbamoylphosphate synt 20.6 1.4E+02 0.0048 26.3 5.6 34 13-51 3-37 (331)
91 1ka9_H Imidazole glycerol phos 20.5 1.3E+02 0.0045 24.9 5.1 31 15-49 3-33 (200)
92 4fs3_A Enoyl-[acyl-carrier-pro 20.5 1.5E+02 0.0052 25.5 5.7 35 12-50 4-40 (256)
93 3nrc_A Enoyl-[acyl-carrier-pro 20.4 1.4E+02 0.0047 25.9 5.4 84 9-108 21-109 (280)
94 2wzn_A TET3, 354AA long hypoth 20.3 76 0.0026 27.1 3.6 24 123-146 295-318 (354)
95 2ab0_A YAJL; DJ-1/THIJ superfa 20.2 1.6E+02 0.0056 24.5 5.7 37 16-53 4-40 (205)
96 3uk7_A Class I glutamine amido 20.1 43 0.0015 31.2 2.0 62 1-67 3-82 (396)
97 3efe_A THIJ/PFPI family protei 20.0 2.2E+02 0.0075 23.9 6.5 37 16-53 7-51 (212)
No 1
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=100.00 E-value=1.2e-79 Score=569.03 Aligned_cols=248 Identities=29% Similarity=0.431 Sum_probs=214.8
Q ss_pred cCCCCCCeEEEeCCCCCCCccHHHHHHHHHhcCCccEEEEecCCCCCcCcccccCCCCeeeeeccCCCCeeEEecCChHH
Q 021782 9 VNSDHKPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPAD 88 (307)
Q Consensus 9 ~~~~~~~~ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~VVAP~~~~Sg~g~siT~~~pl~v~~~~~~g~~~~~v~GTPaD 88 (307)
|+..++|||||||||||+||||++|+++|++. |+|+||||++||||+||++|+++||++++++ ++ .|+|+|||+|
T Consensus 6 ~~~~~~m~ILlTNDDGi~apGi~aL~~~l~~~--~~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~-~~--~~~v~GTPaD 80 (261)
T 3ty2_A 6 KTATPKLRLLLSNDDGVYAKGLAILAKTLADL--GEVDVVAPDRNRSGASNSLTLNAPLHIKNLE-NG--MISVEGTPTD 80 (261)
T ss_dssp -----CCEEEEECSSCTTCHHHHHHHHHHTTT--SEEEEEEESSCCTTCTTCCCCSSCEEEEECT-TS--CEEESSCHHH
T ss_pred hccCCCCeEEEEcCCCCCCHHHHHHHHHHHhc--CCEEEEecCCCCcCcccceecCCCeEEEEec-CC--eEEECCCHHH
Confidence 44567799999999999999999999999984 5999999999999999999999999999975 22 4999999999
Q ss_pred HHHHhhhccCCCCCCcEEEecCCCCCcccccccchhhHHHHHHHHHcCCCEEEEEeecCCCCCCCCccHHHHHHHHHHHH
Q 021782 89 CASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIIN 168 (307)
Q Consensus 89 cV~~al~~~l~~~~PDLVvSGIN~G~NlG~dv~ySGTVgAA~ea~~~GiPaIAvS~~~~~~~~~~~~~~~aa~~~~~li~ 168 (307)
||++||++ +++.+|||||||||+|.|+|.||+||||||||+||+++||||||||+... ...+|+.|++++.++++
T Consensus 81 CV~lal~~-l~~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~----~~~~~~~aa~~~~~lv~ 155 (261)
T 3ty2_A 81 CVHLAITG-VLPEMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSLGGE----LFRYYETAAKVVYQLIQ 155 (261)
T ss_dssp HHHHHTTT-TSSSCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEECSS----SCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHH-hcCCCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEcCCC----CccCHHHHHHHHHHHHH
Confidence 99999997 56789999999999999999999999999999999999999999999642 24579999999999988
Q ss_pred HHHHHHHhcCCCCcceEeecCCCCC-CCCCCeEEEeccccccccceeEeeeccCCceeeecccccCcccccccccCCCCC
Q 021782 169 AILAEIRNQTYPERCFLNIDLPTDI-PNNKGYKLTKQGTSIFKMGWRRVTSEMQGGKMLSTMTMDTDSAVTIETDTSTPL 247 (307)
Q Consensus 169 ~l~~~~~~~~lp~~~~lNVN~P~~~-~~~~g~~~t~~g~~~~~~~~~~~~~~~~g~~~y~~~~~~~~~~~~~~~d~d~~~ 247 (307)
+++ +..||++++||||||.++ .+.+|+|+||||++.|.+.++++ .||+|
T Consensus 156 ~l~----~~~lp~~~~lNVN~P~~~~~~~kGi~vtr~g~r~~~~~~~~~--------------------------~dprG 205 (261)
T 3ty2_A 156 RIE----KDPLPPSTILNINVPDLPYEELKGFEVTRLGTRHRAEPTIRQ--------------------------IDPRG 205 (261)
T ss_dssp HHH----HSCCCTTCEEEEEECSSCGGGCCEEEECBCCCBCSCCCCEEE--------------------------ECTTS
T ss_pred HHH----hcCCCCCeEEEecCCCCCcccCCceEEEECcccccccceEEE--------------------------ECCCC
Confidence 876 356899999999999987 47999999999999998877653 24677
Q ss_pred CcccceeeeccCCCCCCCCCHHHHHHcCCCC-CCC--CCCchhhHHHHHHHHH
Q 021782 248 EEDLLFRREVRGAHIADPDTDWQFLREGYIW-SPY--STSKIGCQLWLNMNLH 297 (307)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~tD~~al~~GyIS-TPl--~~~~~~~~~~l~~~l~ 297 (307)
+.|||+.+.... ...+++||++||++|||| ||| ++|+++.++.|++|+.
T Consensus 206 ~~yyW~~g~~~~-~~~~~gTD~~av~~G~iSVTPl~~DlT~~~~l~~l~~~~~ 257 (261)
T 3ty2_A 206 HPIYWVGAAGPE-QDSGPGTDFFAMNHHCVSITPLRVDLTHYEAFDQLASWVK 257 (261)
T ss_dssp CEEEECCCCCCB-SSCSTTBHHHHHHTTEEEEEEBCSCCBCGGGHHHHHHHHH
T ss_pred CeEEEEcCCccc-ccCCCCChHHHHHCCceEEEeEeecCccHHHHHHHHHHHh
Confidence 778888875333 235889999999999999 995 8999999999999985
No 2
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=100.00 E-value=4.8e-79 Score=563.20 Aligned_cols=243 Identities=33% Similarity=0.493 Sum_probs=215.6
Q ss_pred CeEEEeCCCCCCCccHHHHHHHHHhcCCccEEEEecCCCCCcCcccccCCCCeeeeeccCCCCeeEEecCChHHHHHHhh
Q 021782 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGV 94 (307)
Q Consensus 15 ~~ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~VVAP~~~~Sg~g~siT~~~pl~v~~~~~~g~~~~~v~GTPaDcV~~al 94 (307)
|||||||||||+||||++|+++|++.| +|+||||++||||+||++|+++||++++++. +.. |+|+|||+|||++||
T Consensus 2 M~ILlTNDDGi~apGi~aL~~~l~~~g--~V~VVAP~~~~Sg~g~sit~~~pl~~~~~~~-~~~-~~v~GTPaDCV~lal 77 (251)
T 2phj_A 2 PTFLLVNDDGYFSPGINALREALKSLG--RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDT-DFY-TVIDGTPADCVHLGY 77 (251)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTSCCSCCCSSCEEEEEEET-TEE-EETTCCHHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHhcC--CEEEEecCCCccCCccceecCCCeEEEEecC-CCe-EEECCCHHHHHHHHH
Confidence 899999999999999999999999987 9999999999999999999999999999863 222 999999999999999
Q ss_pred hccCCC-CCCcEEEecCCCCCcccccccchhhHHHHHHHHHcCCCEEEEEeecCCCCCCCCccHHHHHHHHHHHHHHHHH
Q 021782 95 SQALFP-SVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAE 173 (307)
Q Consensus 95 ~~~l~~-~~PDLVvSGIN~G~NlG~dv~ySGTVgAA~ea~~~GiPaIAvS~~~~~~~~~~~~~~~aa~~~~~li~~l~~~ 173 (307)
++ +++ ++|||||||||+|.|+|.||+||||||||+||+++||||||||+... ...+|+.|++++.++++++++
T Consensus 78 ~~-l~~~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~----~~~~~~~aa~~~~~lv~~l~~- 151 (251)
T 2phj_A 78 RV-ILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAFGR----ENIMFEEIAKVCVDIVKKVLN- 151 (251)
T ss_dssp HT-TTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEECS----SSCCHHHHHHHHHHHHHHHHH-
T ss_pred HH-hcCCCCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEcCCC----CccCHHHHHHHHHHHHHHHHh-
Confidence 97 566 78999999999999999999999999999999999999999999642 234799999999999888764
Q ss_pred HHhcCCCCcceEeecCCCCC-CCCCCeEEEeccccccccceeEeeeccCCceeeecccccCcccccccccCCCCCCcccc
Q 021782 174 IRNQTYPERCFLNIDLPTDI-PNNKGYKLTKQGTSIFKMGWRRVTSEMQGGKMLSTMTMDTDSAVTIETDTSTPLEEDLL 252 (307)
Q Consensus 174 ~~~~~lp~~~~lNVN~P~~~-~~~~g~~~t~~g~~~~~~~~~~~~~~~~g~~~y~~~~~~~~~~~~~~~d~d~~~~~~~~ 252 (307)
..+|++++||||||.++ .+.||+|+||||++.|.+.++++ .||+|+.|||
T Consensus 152 ---~~lp~~~~lNVN~P~~~~~~~kgi~~tr~g~~~~~~~~~~~--------------------------~dp~G~~yyW 202 (251)
T 2phj_A 152 ---EGIPEDTYLNVNIPNLRYEEIKGIKVTRQGKRAYKERVFKY--------------------------IDPYGKPFYW 202 (251)
T ss_dssp ---HCCCTTEEEEEEEESSCGGGCCEEEECBCCCCSSEEEEEEE--------------------------ECTTSCEEEE
T ss_pred ---cCCCCCEEEEecCCCCCccccCCEEEEECcccccccceEEE--------------------------ECCCCCEEEE
Confidence 56899999999999986 47999999999999998777653 2467778889
Q ss_pred eeeeccCCCCCCCCCHHHHHHcCCCC-CCC--CCCchhhHHHHHHHHH
Q 021782 253 FRREVRGAHIADPDTDWQFLREGYIW-SPY--STSKIGCQLWLNMNLH 297 (307)
Q Consensus 253 ~~~~~~~~~~~~~~tD~~al~~GyIS-TPl--~~~~~~~~~~l~~~l~ 297 (307)
+.++... ...+++||++||++|||| ||| ++|+++.++.|++|-+
T Consensus 203 l~g~~~~-~~~~~gTD~~av~~G~iSVTPl~~DlT~~~~l~~l~~~~~ 249 (251)
T 2phj_A 203 IAAEEFG-WHAEEGTDYWAVLNGYVSVTPLHLDLTNYKVMKSIKYLED 249 (251)
T ss_dssp EEEESTT-TTCCTTBHHHHHHTTEEEEEEEESCCBCGGGGGGGGGGGC
T ss_pred eCCCccc-CcCCCCCHHHHHHCCceEEEeEeecCccHHHHHHHhhccc
Confidence 9886543 235889999999999999 994 8999999999998853
No 3
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=100.00 E-value=1.2e-78 Score=560.28 Aligned_cols=242 Identities=32% Similarity=0.448 Sum_probs=212.8
Q ss_pred CeEEEeCCCCCCCccHHHHHHHHHhcCCccEEEEecCCCCCcCcccccCCCCeeeeeccCC-CCeeEEecCChHHHHHHh
Q 021782 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFD-GVTAYAVSGTPADCASLG 93 (307)
Q Consensus 15 ~~ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~VVAP~~~~Sg~g~siT~~~pl~v~~~~~~-g~~~~~v~GTPaDcV~~a 93 (307)
|||||||||||+||||++|+++|+++| +|+||||++||||+||++|+++||++++++.. +...|+|+|||+|||++|
T Consensus 1 M~ILlTNDDGi~apGi~aL~~~l~~~g--~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~v~GTPaDCV~la 78 (247)
T 1j9j_A 1 MRILVTNDDGIQSKGIIVLAELLSEEH--EVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVKLA 78 (247)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTCTTCCCCSSCCCEEECCCSSSEEEEEESSCHHHHHHHH
T ss_pred CeEEEEcCCCCCcHhHHHHHHHHHhCC--CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCCceEEECCcHHHHHHHH
Confidence 799999999999999999999999987 99999999999999999999999999998643 335799999999999999
Q ss_pred hhccCCCCCCcEEEecCCCCCcccccccchhhHHHHHHHHHcCCCEEEEEeecCCCCCCCCccHHHHHHHHHHHHHHHHH
Q 021782 94 VSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAE 173 (307)
Q Consensus 94 l~~~l~~~~PDLVvSGIN~G~NlG~dv~ySGTVgAA~ea~~~GiPaIAvS~~~~~~~~~~~~~~~aa~~~~~li~~l~~~ 173 (307)
|++ +++.+|||||||||+|.|+|.||+|||||||||||+++||||||||+... ...+|+.|++++.+++++++
T Consensus 79 l~~-l~~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~----~~~~~~~aa~~~~~lv~~l~-- 151 (247)
T 1j9j_A 79 YNV-VMDKRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISSANY----ESPDFEGAARFLIDFLKEFD-- 151 (247)
T ss_dssp HHT-TSTTCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEESCS----SSCCHHHHHHHHHHHHHHCC--
T ss_pred HHh-hccCCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEecCCC----CCCCHHHHHHHHHHHHHHHH--
Confidence 997 56889999999999999999999999999999999999999999999531 13479999999998888765
Q ss_pred HHhcCCCCcceEeecCCCCCCCCCCeEEEeccccccccceeEeeeccCCceeeecccccCcccccccccCCCCCCcccce
Q 021782 174 IRNQTYPERCFLNIDLPTDIPNNKGYKLTKQGTSIFKMGWRRVTSEMQGGKMLSTMTMDTDSAVTIETDTSTPLEEDLLF 253 (307)
Q Consensus 174 ~~~~~lp~~~~lNVN~P~~~~~~~g~~~t~~g~~~~~~~~~~~~~~~~g~~~y~~~~~~~~~~~~~~~d~d~~~~~~~~~ 253 (307)
+..+|++++|||||| ..+.+|+++||||++.|.+.+.++ .||+++.|||+
T Consensus 152 --~~~lp~~~~lNVN~P--~~~~~g~~~tr~~~~~~~~~~~~~--------------------------~dp~g~~~yw~ 201 (247)
T 1j9j_A 152 --FSLLDPFTMLNINVP--AGEIKGWRFTRQSRRRWNDYFEER--------------------------VSPFGEKYYWM 201 (247)
T ss_dssp --GGGSCTTCEEEEEEC--SSCCCEEEECBCCCCEEEEEEEEE--------------------------ECTTSCEEEEE
T ss_pred --HcCCCcccEEEecCC--ccccCceEEEECCCcccccceEEE--------------------------ECCCCCeEEEe
Confidence 456899999999999 567999999999999887655543 24677788899
Q ss_pred eeeccCCCCCCCCCHHHHHHcCCCC-CCC--CCCchhhHHHHHHHH
Q 021782 254 RREVRGAHIADPDTDWQFLREGYIW-SPY--STSKIGCQLWLNMNL 296 (307)
Q Consensus 254 ~~~~~~~~~~~~~tD~~al~~GyIS-TPl--~~~~~~~~~~l~~~l 296 (307)
.+.... ...+++||++++++|||| ||| ++|+++.++.|++|+
T Consensus 202 ~g~~~~-~~~~~~tD~~a~~~g~iSVTPl~~d~T~~~~l~~l~~~~ 246 (247)
T 1j9j_A 202 MGEVIE-DDDRDDVDYKAVREGYVSITPIHPFLTNEQCLKKLREVY 246 (247)
T ss_dssp EEEEEC-CCCCSSBHHHHHHTTEEEEEEECSCCCCHHHHHHHHHHC
T ss_pred CCcccC-CCCCCCCHHHHHhCCcEEEEeeeecCcCHHHHHHHHHhh
Confidence 876544 234889999999999999 994 899999999999986
No 4
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=100.00 E-value=3.9e-78 Score=558.33 Aligned_cols=244 Identities=33% Similarity=0.476 Sum_probs=214.8
Q ss_pred CeEEEeCCCCCCCccHHHHHHHHHhcCCccEEEEecCCCCCcCcccccCCCCeeeeeccCCCCeeEEecCChHHHHHHhh
Q 021782 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGV 94 (307)
Q Consensus 15 ~~ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~VVAP~~~~Sg~g~siT~~~pl~v~~~~~~g~~~~~v~GTPaDcV~~al 94 (307)
++|||||||||+||||++|+++|++.| +|+||||++||||+||+||+++|+++++++. ...|+|+|||||||++||
T Consensus 2 p~ILlTNDDGi~apGi~~L~~~l~~~g--~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~~--~~~~~v~GTPaDCV~lal 77 (251)
T 2wqk_A 2 PTFLLVNDDGYFSPGINALREALKSLG--RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDT--DFYTVIDGTPADCVHLGY 77 (251)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTSCCSCCCSSCEEEEEEET--TEEEETTCCHHHHHHHHH
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHhCC--CEEEEeeCCCCcccccCcCCCCCceeEEeec--cceeecCCChHHHHhhhh
Confidence 689999999999999999999999988 8999999999999999999999999999752 345889999999999999
Q ss_pred hccCCCCCCcEEEecCCCCCcccccccchhhHHHHHHHHHcCCCEEEEEeecCCCCCCCCccHHHHHHHHHHHHHHHHHH
Q 021782 95 SQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEI 174 (307)
Q Consensus 95 ~~~l~~~~PDLVvSGIN~G~NlG~dv~ySGTVgAA~ea~~~GiPaIAvS~~~~~~~~~~~~~~~aa~~~~~li~~l~~~~ 174 (307)
++++.+.+|||||||||+|.|+|.||+|||||||||||+++||||||||+... ...+|+.|++++.+++++++.
T Consensus 78 ~~~l~~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~~~----~~~~~~~a~~~~~~ii~~ll~-- 151 (251)
T 2wqk_A 78 RVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAFGR----ENIMFEEIAKVCVDIVKKVLN-- 151 (251)
T ss_dssp HTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEECS----SSCCHHHHHHHHHHHHHHHHH--
T ss_pred hhhcCCCCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcccC----CCcchHHHHHHHHHHHHHHHH--
Confidence 97443468999999999999999999999999999999999999999998742 346799999999998888764
Q ss_pred HhcCCCCcceEeecCCCCC-CCCCCeEEEeccccccccceeEeeeccCCceeeecccccCcccccccccCCCCCCcccce
Q 021782 175 RNQTYPERCFLNIDLPTDI-PNNKGYKLTKQGTSIFKMGWRRVTSEMQGGKMLSTMTMDTDSAVTIETDTSTPLEEDLLF 253 (307)
Q Consensus 175 ~~~~lp~~~~lNVN~P~~~-~~~~g~~~t~~g~~~~~~~~~~~~~~~~g~~~y~~~~~~~~~~~~~~~d~d~~~~~~~~~ 253 (307)
..+|++++||||||+++ .+.+|+++||||++.|.+.+++. .||+++.|||+
T Consensus 152 --~~~~~~~~lNVN~P~~~~~~~~g~~~t~~g~~~~~~~~~~~--------------------------~dp~g~~~yw~ 203 (251)
T 2wqk_A 152 --EGIPEDTYLNVNIPNLRYEEIKGIKVTRQGKRAYKERVFKY--------------------------IDPYGKPFYWI 203 (251)
T ss_dssp --HCCCTTEEEEEEEESSCGGGCCEEEECBCCCCSSEEEEEEE--------------------------ECTTSCEEEEE
T ss_pred --hCCccccccccccCCCCccccCceEeeeccccccccceeee--------------------------eCCCCCeEEEe
Confidence 56899999999999987 57999999999999988766553 24677778898
Q ss_pred eeeccCCCCCCCCCHHHHHHcCCCC-CC--CCCCchhhHHHHHHHHH
Q 021782 254 RREVRGAHIADPDTDWQFLREGYIW-SP--YSTSKIGCQLWLNMNLH 297 (307)
Q Consensus 254 ~~~~~~~~~~~~~tD~~al~~GyIS-TP--l~~~~~~~~~~l~~~l~ 297 (307)
.++... ...+++||++||++|||| || +++|+++.+++|+.|.+
T Consensus 204 ~~~~~~-~~~~~gtD~~av~~G~iSVTPL~~dlT~~~~l~~l~~~~~ 249 (251)
T 2wqk_A 204 AAEEFG-WHAEEGTDYWAVLNGYVSVTPLHLDLTNYKVMKSIKYLED 249 (251)
T ss_dssp EEESTT-TTCCTTBHHHHHHTTEEEEEEEESCCBCGGGGGGGGGGGC
T ss_pred ccCccC-CCCCCCCHHHHHhCCcEEEeEeccCCcCHHHHHHHHHHhh
Confidence 886544 235889999999999999 99 48999999999998863
No 5
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=100.00 E-value=5.1e-78 Score=557.81 Aligned_cols=241 Identities=31% Similarity=0.445 Sum_probs=212.8
Q ss_pred CCeEEEeCCCCCCCccHHHHHHHHHhcCCccEEEEecCCCCCcCcccccCCCCeeeeeccCCCCeeEEec-CChHHHHHH
Q 021782 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVS-GTPADCASL 92 (307)
Q Consensus 14 ~~~ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~VVAP~~~~Sg~g~siT~~~pl~v~~~~~~g~~~~~v~-GTPaDcV~~ 92 (307)
.|||||||||||+||||++|+++|++.| +|+||||++||||+||++|+++||+++++. ...|+|+ |||+|||++
T Consensus 1 ~M~ILlTNDDGi~apGi~aL~~~L~~~g--~V~VVAP~~~~Sg~g~aiTl~~Pl~~~~~~---~~~~~v~~GTPaDCV~l 75 (254)
T 2v4n_A 1 SMRILLSNDDGVHAPGIQTLAKALREFA--DVQVVAPDRNRSGASNSLTLESSLRTFTFD---NGDIAVQMGTPTDCVYL 75 (254)
T ss_dssp CCEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTCTTCCCCSSCCEEEECT---TSCEEEETCCHHHHHHH
T ss_pred CCeEEEEcCCCCCCHHHHHHHHHHHhCC--cEEEEeeCCCCcCccCCcCCCCCeEEEEeC---CCCeEECCCCHHHHHHH
Confidence 4899999999999999999999999876 999999999999999999999999999974 2359999 999999999
Q ss_pred hhhccCCCCCCcEEEecCCCCCcccccccchhhHHHHHHHHHcCCCEEEEEeecCCCCCCCCccHHHHHHHHHHHHHHHH
Q 021782 93 GVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILA 172 (307)
Q Consensus 93 al~~~l~~~~PDLVvSGIN~G~NlG~dv~ySGTVgAA~ea~~~GiPaIAvS~~~~~~~~~~~~~~~aa~~~~~li~~l~~ 172 (307)
||++ +++.+|||||||||+|.|+|.||+|||||||||||+++||||||||+... .+|+.|++++.+++++++
T Consensus 76 al~~-ll~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~------~~~~~aa~~~~~li~~l~- 147 (254)
T 2v4n_A 76 GVNA-LMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGY------QHYDTAAAVTCALLRGLS- 147 (254)
T ss_dssp HHHT-TSSSCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEESSS------SCHHHHHHHHHHHHHHHH-
T ss_pred HHhh-ccCCCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEecCcc------cCHHHHHHHHHHHHHHHH-
Confidence 9997 56889999999999999999999999999999999999999999998531 379999999999988876
Q ss_pred HHHhcCCCCcceEeecCCCCC-CCCCCeEEEeccccccccceeEeeeccCCceeeecccccCcccccccccCCCCCCccc
Q 021782 173 EIRNQTYPERCFLNIDLPTDI-PNNKGYKLTKQGTSIFKMGWRRVTSEMQGGKMLSTMTMDTDSAVTIETDTSTPLEEDL 251 (307)
Q Consensus 173 ~~~~~~lp~~~~lNVN~P~~~-~~~~g~~~t~~g~~~~~~~~~~~~~~~~g~~~y~~~~~~~~~~~~~~~d~d~~~~~~~ 251 (307)
+..+|++++||||||.++ .+.+|+|+||||++.|.+.+.+. .||+++.||
T Consensus 148 ---~~~lp~~~~lNVN~P~~~~~~~kg~~~tr~g~~~~~~~~~~~--------------------------~dp~g~~~y 198 (254)
T 2v4n_A 148 ---REPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQ--------------------------EDPRGNTLY 198 (254)
T ss_dssp ---HSCCCSCSEEEEEECSSCGGGCCCEEECBCCEESCCCCEEEE--------------------------ECTTSCEEE
T ss_pred ---HcCCCccceEEecCCCCCcccCCceEEEECCccccccceeEe--------------------------ECCCCCeEE
Confidence 367899999999999987 47999999999999988766553 246677778
Q ss_pred ceeeeccCCCCCCCCCHHHHHHcCCCC-CCC--CCCchhhHHHHHHHHH
Q 021782 252 LFRREVRGAHIADPDTDWQFLREGYIW-SPY--STSKIGCQLWLNMNLH 297 (307)
Q Consensus 252 ~~~~~~~~~~~~~~~tD~~al~~GyIS-TPl--~~~~~~~~~~l~~~l~ 297 (307)
|+.+.... ...+++||++|+++|||| ||| ++|+++.++.|++|+.
T Consensus 199 w~~~~~~~-~~~~~gtD~~av~~G~iSVTPl~~d~t~~~~l~~l~~~~~ 246 (254)
T 2v4n_A 199 WIGPPGDK-YDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLD 246 (254)
T ss_dssp EECCCCCE-EECSTTBHHHHHHTTCEEEEEECSCCCCGGGHHHHHHHHH
T ss_pred EeCCCccC-CCCCCCCHHHHHHCCcEEEEeEeccCcCHHHHHHHHHHHh
Confidence 88764332 224789999999999999 994 8999999999999974
No 6
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=100.00 E-value=3.2e-76 Score=552.60 Aligned_cols=244 Identities=27% Similarity=0.376 Sum_probs=207.5
Q ss_pred CeEEEeCCCCCCCccHHHHHHHHHhcCCccEEEEecCCCCCcCcccccCCCCeeeeeccCCCCeeEEecCChHHHHHHhh
Q 021782 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGV 94 (307)
Q Consensus 15 ~~ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~VVAP~~~~Sg~g~siT~~~pl~v~~~~~~g~~~~~v~GTPaDcV~~al 94 (307)
|||||||||||.||||++|+++|+++| +|+||||++||||+||++|+++||++++++..+...|+|+|||+|||++||
T Consensus 1 M~ILlTNDDGi~ApGi~aL~~aL~~~g--~V~VVAP~~~qSg~g~siTl~~pl~~~~~~~~~~~~~~v~GTPaDCV~lal 78 (280)
T 1l5x_A 1 MKILVTNDDGVHSPGLRLLYQFALSLG--DVDVVAPESPKSATGLGITLHKPLRMYEVDLCGFRAIATSGTPSDTVYLAT 78 (280)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHGGGS--EEEEEEESSCTTTSCSSCCCSSCBCEEEEECSSSEEEEESSCHHHHHHHHH
T ss_pred CeEEEEcCCCCCcHhHHHHHHHHHhCC--CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCceEEECCcHHHHHHHHH
Confidence 799999999999999999999999987 999999999999999999999999999986544457999999999999999
Q ss_pred hccCCCCCCcEEEecCCCCCccccc-ccchhhHHHHHHHHHcCCCEEEEEeecCCCCCCC----CccHHHHHHHHHHHHH
Q 021782 95 SQALFPSVPDLVISGINMGSNCGYH-VVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNV----NDYTLAAEACLPIINA 169 (307)
Q Consensus 95 ~~~l~~~~PDLVvSGIN~G~NlG~d-v~ySGTVgAA~ea~~~GiPaIAvS~~~~~~~~~~----~~~~~aa~~~~~li~~ 169 (307)
++ + +.+|||||||||+|.|+|.| |+|||||||||||+++||||||||+..... ... .+|+.|++++.+++++
T Consensus 79 ~~-l-~~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~~~~~-~~~~~~~~~~~~aa~~~~~lv~~ 155 (280)
T 1l5x_A 79 FG-L-GRKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAYLENW-NELLNNKEAVEIMGAVVSSTASY 155 (280)
T ss_dssp HH-H-TSCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEECCSCH-HHHHTCHHHHHHHHHHHHHHHHH
T ss_pred hc-C-CCCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEccccCC-CcccccccCHHHHHHHHHHHHHH
Confidence 97 5 77999999999999999999 999999999999999999999999953110 111 3699999999999888
Q ss_pred HHHHHHhcCCCCcc-eEeecCCCCC-CCCCCeEEEeccccccccceeEeeeccCCceeeecccccCcccccccccCCCCC
Q 021782 170 ILAEIRNQTYPERC-FLNIDLPTDI-PNNKGYKLTKQGTSIFKMGWRRVTSEMQGGKMLSTMTMDTDSAVTIETDTSTPL 247 (307)
Q Consensus 170 l~~~~~~~~lp~~~-~lNVN~P~~~-~~~~g~~~t~~g~~~~~~~~~~~~~~~~g~~~y~~~~~~~~~~~~~~~d~d~~~ 247 (307)
+++ ..+|+++ +||||||.++ .+.| +++||||++.|.+.++++ .||++
T Consensus 156 l~~----~~lp~~~d~LNVN~P~~~~~~~k-~~~tr~g~~~~~~~~~~~--------------------------~dprg 204 (280)
T 1l5x_A 156 VLK----NGMPQGVDVISVNFPRRLGRGVR-AKLVKAAKLRYAQQVVER--------------------------VDPRG 204 (280)
T ss_dssp HHH----HCSCTTCSEEEEEECSCCCTTCC-EEECBCCSCSBCSCCEEE--------------------------ECTTS
T ss_pred HHh----cCCCCCCceEEecCCCCCCCCce-EEEEECCCcccccceEEE--------------------------ECCCC
Confidence 764 4689999 9999999987 4788 999999999988766553 24667
Q ss_pred CcccceeeeccCCCCCCCCCHH-HHHHcCCCC-CCC--CCCchh--------hHHHHHHHHH
Q 021782 248 EEDLLFRREVRGAHIADPDTDW-QFLREGYIW-SPY--STSKIG--------CQLWLNMNLH 297 (307)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~tD~-~al~~GyIS-TPl--~~~~~~--------~~~~l~~~l~ 297 (307)
+.|||+.+.... .++|||+ +++++|||| ||| ++|+++ .++.+++|+.
T Consensus 205 ~~~yw~~g~~~~---~~~~tD~~~av~~G~iSVTPl~~d~T~~~~l~~l~~~~~~~~~~~~~ 263 (280)
T 1l5x_A 205 VRYYWLYGRDLA---PEPETDVYVVLKEGGIAITPLTLNLNAVDAHREVDMDSLNRMVEYIN 263 (280)
T ss_dssp CEEEECSCSBCC---CCTTBHHHHHHTSCCEEEEEECCCCBSSCCBCCCCHHHHHHHHHHHH
T ss_pred CeEEEeCCCcCC---CCCCChHHHHHhCCeEEEEeEeccCCChHHHHhccHHHHHHHHHHHH
Confidence 778888764332 2889999 999999999 994 666544 4455666665
No 7
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=100.00 E-value=5.8e-76 Score=541.42 Aligned_cols=232 Identities=32% Similarity=0.452 Sum_probs=200.0
Q ss_pred CeEEEeCCCCCCCccHHHHHHHHHhcCCccEEEEecCCCCCcCcccccCCCCeeeeeccCC----CCeeEEecCChHHHH
Q 021782 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFD----GVTAYAVSGTPADCA 90 (307)
Q Consensus 15 ~~ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~VVAP~~~~Sg~g~siT~~~pl~v~~~~~~----g~~~~~v~GTPaDcV 90 (307)
|||||||||||+||||++|+++|+++| +|+||||++||||+||++|+++||++++++.. +...|+|+|||+|||
T Consensus 1 M~ILlTNDDGi~apGi~aL~~~l~~~g--~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~~~~v~GTPaDCV 78 (244)
T 2e6c_A 1 MRILVTNDDGIYSPGLWALAEAASQFG--EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPLHAPHFPAYRVRGTPADCV 78 (244)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEECSSCCCCCSSCCCSSCBEEEECCCCTTSCCCCEEEEESCHHHHH
T ss_pred CeEEEEcCCCCCcHhHHHHHHHHHhCC--CEEEEecCCCCcCCcccccCCCCeEEEEeccCcCCCCCceEEEcCcHHHHH
Confidence 799999999999999999999999987 99999999999999999999999999998642 335799999999999
Q ss_pred HHhhhccCCCCCCcEEEecCCCCCcccccccchhhHHHHHHHHHcCCCEEEEEeecCCCCCCCCccHHHHHHHHHHHHHH
Q 021782 91 SLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAI 170 (307)
Q Consensus 91 ~~al~~~l~~~~PDLVvSGIN~G~NlG~dv~ySGTVgAA~ea~~~GiPaIAvS~~~~~~~~~~~~~~~aa~~~~~li~~l 170 (307)
++||+ | +.+|||||||||+|.|+|.||+|||||||||||+++||||||||+.... ...+|+.|++++.++++++
T Consensus 79 ~lal~--l-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~~---~~~~~~~aa~~~~~li~~l 152 (244)
T 2e6c_A 79 ALGLH--L-FGPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSVPLNG---EVPDFAGLRPWLLRTLETL 152 (244)
T ss_dssp HHHHH--H-SCSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEECCSS---SCCCHHHHHHHHHHHHHHH
T ss_pred HHHHc--C-CCCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEeccCCC---CCCCHHHHHHHHHHHHHHH
Confidence 99997 3 6789999999999999999999999999999999999999999996311 1247999999999998887
Q ss_pred HHHHHhcCCCCcceEeecCCCCCCCCCCeEEEeccccccccceeEeeeccCCceeeecccccCcccccccccCCCCCCcc
Q 021782 171 LAEIRNQTYPERCFLNIDLPTDIPNNKGYKLTKQGTSIFKMGWRRVTSEMQGGKMLSTMTMDTDSAVTIETDTSTPLEED 250 (307)
Q Consensus 171 ~~~~~~~~lp~~~~lNVN~P~~~~~~~g~~~t~~g~~~~~~~~~~~~~~~~g~~~y~~~~~~~~~~~~~~~d~d~~~~~~ 250 (307)
++ . |++++|||||| .+.+|+++||||++.|.+.+.++ .||+++.|
T Consensus 153 ~~----~--p~~~~lNVN~P---~~~~g~~~tr~g~~~~~~~~~~~--------------------------~dp~g~~~ 197 (244)
T 2e6c_A 153 LR----L--ERPFLVNVNLP---LRPKGFLWTRQSVRAYEGVVIPG--------------------------EDPMGRPF 197 (244)
T ss_dssp TT----S--CSSCEEEEECC---SSCCEEEECBCCCCCEECCEEEE--------------------------ECTTSCEE
T ss_pred Hh----C--CcCcEEEeeCC---CccCCeEEEECCCCccccceEEE--------------------------ECCCCCeE
Confidence 63 3 88999999999 56899999999999988766543 24677778
Q ss_pred cceeeeccCCCCCCCCCHHHHHHcCCCC-CCC--CCCchhhHHH
Q 021782 251 LLFRREVRGAHIADPDTDWQFLREGYIW-SPY--STSKIGCQLW 291 (307)
Q Consensus 251 ~~~~~~~~~~~~~~~~tD~~al~~GyIS-TPl--~~~~~~~~~~ 291 (307)
||+.+.... . ++++||++++++|||| ||| ++|+++.++.
T Consensus 198 yw~~g~~~~-~-~~~~tD~~a~~~g~iSVTPl~~d~T~~~~l~~ 239 (244)
T 2e6c_A 198 YWFAPRPLK-E-AEEGTDRWAVAQGFVSATPLRLDLTDETRLQP 239 (244)
T ss_dssp EEECCEESS-C-CCTTBHHHHHHTTEEEEEEBCSCCBCTTCSSC
T ss_pred EEeCCCcCC-C-CCCCcHHHHHhCCCEEeeceecCCccHHHHHH
Confidence 888875443 2 2889999999999999 884 6777665443
No 8
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=94.37 E-value=0.099 Score=48.65 Aligned_cols=38 Identities=13% Similarity=0.150 Sum_probs=28.5
Q ss_pred CCCCeEEEeCCCCC-CCccHHHHHHHHHhcCCccEEEEec
Q 021782 12 DHKPTIMVTNDDGI-DAPGLRSLVRVLVSTNRYTVQVCAP 50 (307)
Q Consensus 12 ~~~~~ILlTNDDGi-~a~Gi~aL~~aL~~~g~~~V~VVAP 50 (307)
...||||++...|. +--....|+++|++.| |+|.|++|
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~G-heV~v~~~ 56 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAG-HDVLIAVA 56 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTT-CEEEEEES
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCC-CEEEEecc
Confidence 34699999976432 1123578999999999 89999998
No 9
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=93.98 E-value=0.2 Score=46.07 Aligned_cols=38 Identities=8% Similarity=-0.031 Sum_probs=28.5
Q ss_pred CCCCeEEEeCCCCCCCcc----HHHHHHHHHhcCCccEEEEecCCC
Q 021782 12 DHKPTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (307)
Q Consensus 12 ~~~~~ILlTNDDGi~a~G----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (307)
.+.||||++. ..+.| +.+|+++|++.| |+|+++.+..-
T Consensus 20 ~~~MRIL~~~---~p~~GHv~P~l~LA~~L~~rG-h~Vt~~t~~~~ 61 (400)
T 4amg_A 20 FQSMRALFIT---SPGLSHILPTVPLAQALRALG-HEVRYATGGDI 61 (400)
T ss_dssp -CCCEEEEEC---CSSHHHHGGGHHHHHHHHHTT-CEEEEEECSST
T ss_pred CCCCeEEEEC---CCchhHHHHHHHHHHHHHHCC-CEEEEEeCcch
Confidence 4579999984 22322 457999999999 89999987654
No 10
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=93.55 E-value=0.035 Score=51.69 Aligned_cols=40 Identities=20% Similarity=0.086 Sum_probs=27.9
Q ss_pred CCCCCeEEEeCCCCC-CCccHHHHHHHHHhcCCccEEEEecC
Q 021782 11 SDHKPTIMVTNDDGI-DAPGLRSLVRVLVSTNRYTVQVCAPD 51 (307)
Q Consensus 11 ~~~~~~ILlTNDDGi-~a~Gi~aL~~aL~~~g~~~V~VVAP~ 51 (307)
+...||||++..-+. +.-.+..|+++|++.| |+|.|+++.
T Consensus 12 ~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~G-heV~v~~~~ 52 (398)
T 4fzr_A 12 RGSHMRILVIAGCSEGFVMPLVPLSWALRAAG-HEVLVAASE 52 (398)
T ss_dssp ---CCEEEEECCSSHHHHGGGHHHHHHHHHTT-CEEEEEEEG
T ss_pred CCCceEEEEEcCCCcchHHHHHHHHHHHHHCC-CEEEEEcCH
Confidence 455799998875321 1123578999999999 899999974
No 11
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=92.63 E-value=0.064 Score=49.53 Aligned_cols=37 Identities=16% Similarity=0.128 Sum_probs=27.0
Q ss_pred CCeEEEeCCCCC-CCccHHHHHHHHHhcCCccEEEEecC
Q 021782 14 KPTIMVTNDDGI-DAPGLRSLVRVLVSTNRYTVQVCAPD 51 (307)
Q Consensus 14 ~~~ILlTNDDGi-~a~Gi~aL~~aL~~~g~~~V~VVAP~ 51 (307)
+||||++..-+. +--....|+++|++.| |+|.|+++.
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~G-heV~v~~~~ 38 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASG-HEVLIAAPP 38 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTT-CEEEEEECH
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCC-CEEEEecCh
Confidence 489988865321 1123478999999999 899999864
No 12
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=92.51 E-value=0.36 Score=45.12 Aligned_cols=36 Identities=22% Similarity=0.194 Sum_probs=27.3
Q ss_pred CCeEEEeCCCCCCCcc----HHHHHHHHHhcCCccEEEEecCCC
Q 021782 14 KPTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (307)
Q Consensus 14 ~~~ILlTNDDGi~a~G----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (307)
.||||+..- .+.| +..|+++|++.| |+|+++.+...
T Consensus 7 m~kIl~~~~---~~~Gh~~p~~~la~~L~~~G-~~V~~~~~~~~ 46 (430)
T 2iyf_A 7 PAHIAMFSI---AAHGHVNPSLEVIRELVARG-HRVTYAIPPVF 46 (430)
T ss_dssp -CEEEEECC---SCHHHHGGGHHHHHHHHHTT-CEEEEEECGGG
T ss_pred cceEEEEeC---CCCccccchHHHHHHHHHCC-CeEEEEeCHHH
Confidence 579998753 2333 578999999999 89999998764
No 13
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=92.25 E-value=0.26 Score=45.52 Aligned_cols=39 Identities=8% Similarity=0.035 Sum_probs=28.0
Q ss_pred CCCCeEEEeCCCCC-CCccHHHHHHHHHhcCCccEEEEecC
Q 021782 12 DHKPTIMVTNDDGI-DAPGLRSLVRVLVSTNRYTVQVCAPD 51 (307)
Q Consensus 12 ~~~~~ILlTNDDGi-~a~Gi~aL~~aL~~~g~~~V~VVAP~ 51 (307)
...||||++.--+. +.-....|+++|++.| |+|.|+++.
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~G-heV~v~~~~ 57 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAG-HEVTFATGE 57 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTT-CEEEEEECG
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCC-CEEEEEccH
Confidence 55799998872211 1112458999999999 899999875
No 14
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=91.70 E-value=0.36 Score=44.21 Aligned_cols=36 Identities=17% Similarity=0.126 Sum_probs=26.3
Q ss_pred CeEEEeCCCCC-CCccHHHHHHHHHhcCCccEEEEecC
Q 021782 15 PTIMVTNDDGI-DAPGLRSLVRVLVSTNRYTVQVCAPD 51 (307)
Q Consensus 15 ~~ILlTNDDGi-~a~Gi~aL~~aL~~~g~~~V~VVAP~ 51 (307)
||||++.--|. +.--+..|+++|++.| |+|+++++.
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~G-heV~v~~~~ 41 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRG-HRITYVTTP 41 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTT-CEEEEEECH
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCC-CEEEEEcCH
Confidence 48998874321 1123578999999999 899999974
No 15
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=90.83 E-value=0.18 Score=47.38 Aligned_cols=37 Identities=19% Similarity=0.282 Sum_probs=26.8
Q ss_pred CeEEEeCCCCC-CCccHHHHHHHHHhcCCccEEEEecCC
Q 021782 15 PTIMVTNDDGI-DAPGLRSLVRVLVSTNRYTVQVCAPDS 52 (307)
Q Consensus 15 ~~ILlTNDDGi-~a~Gi~aL~~aL~~~g~~~V~VVAP~~ 52 (307)
||||++-+... +.-.+.+|+++|++.| |+|+|++|..
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~G-h~V~v~~~~~ 38 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELG-ADARMCLPPD 38 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTT-CCEEEEECGG
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCC-CeEEEEeCHH
Confidence 67888765321 1234678999999999 8999999854
No 16
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=90.39 E-value=0.51 Score=43.73 Aligned_cols=41 Identities=15% Similarity=0.112 Sum_probs=27.9
Q ss_pred CCCCCeEEEeCCCCC-CCccHHHHHHHHHhcCCccEEEEecCC
Q 021782 11 SDHKPTIMVTNDDGI-DAPGLRSLVRVLVSTNRYTVQVCAPDS 52 (307)
Q Consensus 11 ~~~~~~ILlTNDDGi-~a~Gi~aL~~aL~~~g~~~V~VVAP~~ 52 (307)
....||||++.--|. +.--..+|+++|++.| |+|+++++..
T Consensus 17 ~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~G-h~V~v~~~~~ 58 (415)
T 3rsc_A 17 GRHMAHLLIVNVASHGLILPTLTVVTELVRRG-HRVSYVTAGG 58 (415)
T ss_dssp --CCCEEEEECCSCHHHHGGGHHHHHHHHHTT-CEEEEEECGG
T ss_pred cccCCEEEEEeCCCccccccHHHHHHHHHHCC-CEEEEEeCHH
Confidence 344689999874211 0112468999999999 8999999654
No 17
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=89.99 E-value=1.1 Score=41.90 Aligned_cols=38 Identities=24% Similarity=0.200 Sum_probs=29.2
Q ss_pred CCCeEEEeCCCCCCCcc----HHHHHHHHHhcCCccEEEEecCCCC
Q 021782 13 HKPTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDSEK 54 (307)
Q Consensus 13 ~~~~ILlTNDDGi~a~G----i~aL~~aL~~~g~~~V~VVAP~~~~ 54 (307)
..|+||+.. ..+.| +..|+++|++.| |+|+++++...+
T Consensus 11 ~~~~Il~~~---~~~~GHv~p~l~la~~L~~~G-h~V~~~~~~~~~ 52 (424)
T 2iya_A 11 TPRHISFFN---IPGHGHVNPSLGIVQELVARG-HRVSYAITDEFA 52 (424)
T ss_dssp CCCEEEEEC---CSCHHHHHHHHHHHHHHHHTT-CEEEEEECGGGH
T ss_pred ccceEEEEe---CCCCcccchHHHHHHHHHHCC-CeEEEEeCHHHH
Confidence 357999983 44444 467999999999 899999987653
No 18
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=86.21 E-value=1.1 Score=41.01 Aligned_cols=42 Identities=14% Similarity=0.177 Sum_probs=32.1
Q ss_pred CCCeEEEeCCCCCC--Cc----cHHHHHHHHHhcCCccEEEEecCCCCC
Q 021782 13 HKPTIMVTNDDGID--AP----GLRSLVRVLVSTNRYTVQVCAPDSEKS 55 (307)
Q Consensus 13 ~~~~ILlTNDDGi~--a~----Gi~aL~~aL~~~g~~~V~VVAP~~~~S 55 (307)
+.||||+..+.-.. .- -+..|+++|.+.| |+|.|++|.....
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G-~~V~v~~~~~~~~ 48 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLG-HEVLVFTPSHGRF 48 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTT-CEEEEEEECTTCS
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCC-CeEEEEecCCCCc
Confidence 46999998876433 12 2678999999999 8999999886543
No 19
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=78.06 E-value=1.3 Score=39.62 Aligned_cols=40 Identities=13% Similarity=0.055 Sum_probs=30.1
Q ss_pred CCeEEEeCCC---------------CCC--CccHHHHHHHHHhcCCccEEEEecCCCC
Q 021782 14 KPTIMVTNDD---------------GID--APGLRSLVRVLVSTNRYTVQVCAPDSEK 54 (307)
Q Consensus 14 ~~~ILlTNDD---------------Gi~--a~Gi~aL~~aL~~~g~~~V~VVAP~~~~ 54 (307)
.||||+.+.. ... ..-+..|+++|++.| |+|.|+.+....
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G-~~v~v~~~~~~~ 59 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELG-HEVFLLGAPGSP 59 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTT-CEEEEESCTTSC
T ss_pred ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcC-CeEEEEecCCCC
Confidence 6899999887 111 123577899999999 899999987654
No 20
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=72.61 E-value=4.3 Score=38.53 Aligned_cols=39 Identities=13% Similarity=0.153 Sum_probs=30.5
Q ss_pred CCeEEEeCCCCCCC------------cc----HHHHHHHHHhcCCccEEEEecCCC
Q 021782 14 KPTIMVTNDDGIDA------------PG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (307)
Q Consensus 14 ~~~ILlTNDDGi~a------------~G----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (307)
.||||+.++..... -| +..|+++|.+.| |+|.|+++...
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G-~~V~v~~~~~~ 61 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMG-VQVDIITRRIK 61 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTT-CEEEEEEECCC
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcC-CeEEEEeCCCC
Confidence 49999999876432 22 577999999999 89999998654
No 21
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=70.39 E-value=5.4 Score=36.04 Aligned_cols=44 Identities=23% Similarity=0.192 Sum_probs=30.4
Q ss_pred CCCCCeEEEeCCCCCCC-----ccHHHHHHHHHhcCCccEEEEecCCCCC
Q 021782 11 SDHKPTIMVTNDDGIDA-----PGLRSLVRVLVSTNRYTVQVCAPDSEKS 55 (307)
Q Consensus 11 ~~~~~~ILlTNDDGi~a-----~Gi~aL~~aL~~~g~~~V~VVAP~~~~S 55 (307)
..+.||||+....-... .-+..|+++|++.| |+|+|+++.....
T Consensus 17 ~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~~~~ 65 (406)
T 2gek_A 17 RGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAG-HEVSVLAPASPHV 65 (406)
T ss_dssp ----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTT-CEEEEEESCCTTS
T ss_pred CCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCC-CeEEEEecCCccc
Confidence 45679999998653322 23567999999999 7999999986543
No 22
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=70.20 E-value=4.4 Score=37.37 Aligned_cols=42 Identities=10% Similarity=0.109 Sum_probs=30.9
Q ss_pred CCCCCeEEEeCCCCCC--------Ccc----HHHHHHHHHhcCCccEEEEecCCC
Q 021782 11 SDHKPTIMVTNDDGID--------APG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (307)
Q Consensus 11 ~~~~~~ILlTNDDGi~--------a~G----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (307)
+.+.||||+.+++-.. .-| +..|+++|.+.| |+|.|+++...
T Consensus 17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G-~~V~v~~~~~~ 70 (438)
T 3c48_A 17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQG-IEVDIYTRATR 70 (438)
T ss_dssp --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTT-CEEEEEEECCC
T ss_pred CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcC-CEEEEEecCCC
Confidence 4567999999986543 123 578999999999 89999998753
No 23
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=64.61 E-value=3.4 Score=38.97 Aligned_cols=37 Identities=8% Similarity=0.062 Sum_probs=28.6
Q ss_pred CeEEEeCCCCCC---C----ccHHHHHHHHHhcCCccEEEEecCC
Q 021782 15 PTIMVTNDDGID---A----PGLRSLVRVLVSTNRYTVQVCAPDS 52 (307)
Q Consensus 15 ~~ILlTNDDGi~---a----~Gi~aL~~aL~~~g~~~V~VVAP~~ 52 (307)
||||+.++.-.. . .-+..|+++|.+.| |+|.|++|..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G-~~V~vi~~~~ 44 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHG-VRTRTLIPGY 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTT-CEEEEEEECC
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcC-CeEEEEeccc
Confidence 789998886432 1 23567999999999 8999999864
No 24
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=64.08 E-value=5.6 Score=37.35 Aligned_cols=40 Identities=13% Similarity=0.170 Sum_probs=28.7
Q ss_pred CCCCCCeEEEeCCCCCCCcc----HHHHHHHHHhcCCccEEEEecCCC
Q 021782 10 NSDHKPTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (307)
Q Consensus 10 ~~~~~~~ILlTNDDGi~a~G----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (307)
.....||||++ +..+.| +.+|+++|++.| |+|+++++...
T Consensus 16 ~~~~~mrIl~~---~~~~~GHv~p~l~la~~L~~~G-heV~~~~~~~~ 59 (441)
T 2yjn_A 16 PRGSHMRVVFS---SMASKSHLFGLVPLAWAFRAAG-HEVRVVASPAL 59 (441)
T ss_dssp ---CCCEEEEE---CCSCHHHHTTTHHHHHHHHHTT-CEEEEEECGGG
T ss_pred ccCCccEEEEE---cCCCcchHhHHHHHHHHHHHCC-CeEEEEeCchh
Confidence 34567999999 333333 467999999999 89999998653
No 25
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=63.66 E-value=5 Score=35.84 Aligned_cols=37 Identities=8% Similarity=0.017 Sum_probs=27.5
Q ss_pred CeEEEeCCCCCCCcc----HHHHHHHHHhcCCccEEEEecCC
Q 021782 15 PTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDS 52 (307)
Q Consensus 15 ~~ILlTNDDGi~a~G----i~aL~~aL~~~g~~~V~VVAP~~ 52 (307)
||||+..+.-...-| +..|+++|++.| |+|.|+++..
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~ 41 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARG-HHVRVYTQSW 41 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTT-CCEEEEESEE
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCC-CeEEEEecCC
Confidence 788888765333333 678999999999 8999999864
No 26
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=63.19 E-value=6.2 Score=35.30 Aligned_cols=42 Identities=17% Similarity=0.215 Sum_probs=30.8
Q ss_pred CCCCeEEEeCC------C----CCCCccHHHHHHHHHhcCCccEEEEecCCCC
Q 021782 12 DHKPTIMVTND------D----GIDAPGLRSLVRVLVSTNRYTVQVCAPDSEK 54 (307)
Q Consensus 12 ~~~~~ILlTND------D----Gi~a~Gi~aL~~aL~~~g~~~V~VVAP~~~~ 54 (307)
+++.-|+|||- | |+.-.=+..-++.|++.| ++|.++.|...+
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG-~~V~~aSp~g~~ 60 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAG-FEVDVASETGTF 60 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTT-CEEEEEESSSCC
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCC-CEEEEEeCCCCc
Confidence 34455777882 2 555556677789999999 699999997654
No 27
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=63.12 E-value=3.8 Score=38.59 Aligned_cols=37 Identities=11% Similarity=0.169 Sum_probs=28.2
Q ss_pred CeEEEeCCCCCC---Ccc----HHHHHHHHHhcCCccEEEEecCC
Q 021782 15 PTIMVTNDDGID---APG----LRSLVRVLVSTNRYTVQVCAPDS 52 (307)
Q Consensus 15 ~~ILlTNDDGi~---a~G----i~aL~~aL~~~g~~~V~VVAP~~ 52 (307)
||||+.++.-.. .-| +..|+++|.+.| |+|.|++|..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G-~~V~vi~~~~ 44 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADG-VDARVLLPAF 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTT-CEEEEEEECC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcC-CEEEEEecCc
Confidence 789988875322 223 467999999999 8999999864
No 28
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=59.04 E-value=5.4 Score=35.57 Aligned_cols=40 Identities=10% Similarity=0.120 Sum_probs=29.3
Q ss_pred CCeEEEeCC----------CCCCCccHHHHHHHHHhcCCccEEEEecCCCC
Q 021782 14 KPTIMVTND----------DGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEK 54 (307)
Q Consensus 14 ~~~ILlTND----------DGi~a~Gi~aL~~aL~~~g~~~V~VVAP~~~~ 54 (307)
+.-|++||= +|+...=+..-++.|++.| ++|.++.|....
T Consensus 5 kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG-~~V~iaS~~g~~ 54 (244)
T 3kkl_A 5 RALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHG-FEVDFVSETGGF 54 (244)
T ss_dssp EEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTT-CEEEEEESSSCC
T ss_pred EEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCC-CEEEEEeCCCCC
Confidence 444667762 4555556677889999999 699999997554
No 29
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=57.71 E-value=10 Score=33.37 Aligned_cols=29 Identities=17% Similarity=0.352 Sum_probs=23.3
Q ss_pred CeEEEeCCCCCCCccH--HHHHHHHHhcCCccEEEEe
Q 021782 15 PTIMVTNDDGIDAPGL--RSLVRVLVSTNRYTVQVCA 49 (307)
Q Consensus 15 ~~ILlTNDDGi~a~Gi--~aL~~aL~~~g~~~V~VVA 49 (307)
||||||= +-|. +.|++.|.+.| |+|+++.
T Consensus 1 MkILVTG-----atGfIG~~L~~~L~~~G-~~V~~l~ 31 (298)
T 4b4o_A 1 MRVLVGG-----GTGFIGTALTQLLNARG-HEVTLVS 31 (298)
T ss_dssp CEEEEET-----TTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEEC-----CCCHHHHHHHHHHHHCC-CEEEEEE
Confidence 8999993 4454 77999999999 8998874
No 30
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=56.16 E-value=12 Score=31.95 Aligned_cols=42 Identities=17% Similarity=0.335 Sum_probs=32.8
Q ss_pred CCCCeEEEeCCCCCCCcc-HHHHHHHHHhcCCccEEEEecCCCC
Q 021782 12 DHKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDSEK 54 (307)
Q Consensus 12 ~~~~~ILlTNDDGi~a~G-i~aL~~aL~~~g~~~V~VVAP~~~~ 54 (307)
.+..+|||. ||++.+=+ +.++++.|++.|...|.+++|-...
T Consensus 118 ~~gk~VllV-DDvi~TG~Tl~~a~~~L~~~ga~~V~v~~~v~~~ 160 (208)
T 1wd5_A 118 RKGRDVVLV-DDGVATGASMEAALSVVFQEGPRRVVVAVPVASP 160 (208)
T ss_dssp CTTSEEEEE-CSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBCH
T ss_pred CCCCEEEEE-CCCccHHHHHHHHHHHHHHcCCCEEEEEEEEcCH
Confidence 456789998 99998733 6788899999986678888876543
No 31
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=56.10 E-value=16 Score=33.34 Aligned_cols=40 Identities=20% Similarity=0.160 Sum_probs=29.7
Q ss_pred CCCCeEEEeCCCCCCCcc----HHHHHHHHHhcCCccEEEEecCCC
Q 021782 12 DHKPTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (307)
Q Consensus 12 ~~~~~ILlTNDDGi~a~G----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (307)
+++||||+.++.. ..-| +..|++.|.+.| |+|.|+.....
T Consensus 38 ~~~mkIl~v~~~~-~~GG~~~~~~~l~~~L~~~G-~~v~v~~~~~~ 81 (416)
T 2x6q_A 38 LKGRSFVHVNSTS-FGGGVAEILHSLVPLLRSIG-IEARWFVIEGP 81 (416)
T ss_dssp TTTCEEEEEESCS-SSSTHHHHHHHHHHHHHHTT-CEEEEEECCCC
T ss_pred hhccEEEEEeCCC-CCCCHHHHHHHHHHHHHhCC-CeEEEEEccCC
Confidence 4679999988763 3334 346889999999 89998887543
No 32
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=55.22 E-value=17 Score=33.44 Aligned_cols=31 Identities=16% Similarity=0.320 Sum_probs=21.7
Q ss_pred CeEEEeCCCCCCCcc----HHHHHHHHHhcCCccEEEEe
Q 021782 15 PTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCA 49 (307)
Q Consensus 15 ~~ILlTNDDGi~a~G----i~aL~~aL~~~g~~~V~VVA 49 (307)
.||||+- | .+-| -.+|+++|++.| |+|..+.
T Consensus 3 ~~i~i~~--G-GTgGHi~palala~~L~~~g-~~V~~vg 37 (365)
T 3s2u_A 3 GNVLIMA--G-GTGGHVFPALACAREFQARG-YAVHWLG 37 (365)
T ss_dssp CEEEEEC--C-SSHHHHHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CcEEEEc--C-CCHHHHHHHHHHHHHHHhCC-CEEEEEE
Confidence 4788873 1 1212 357999999999 8998774
No 33
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=54.38 E-value=16 Score=31.71 Aligned_cols=33 Identities=21% Similarity=0.274 Sum_probs=25.3
Q ss_pred CCeEEEeCCCCCCCccH--HHHHHHHHhcCCccEEEEecCCC
Q 021782 14 KPTIMVTNDDGIDAPGL--RSLVRVLVSTNRYTVQVCAPDSE 53 (307)
Q Consensus 14 ~~~ILlTNDDGi~a~Gi--~aL~~aL~~~g~~~V~VVAP~~~ 53 (307)
.|+|||| | + |. +.|++.|.+.| ++|+++.-..+
T Consensus 3 ~~~ilVt---G--a-G~iG~~l~~~L~~~g-~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIA---G--C-GDLGLELARRLTAQG-HEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEE---C--C-SHHHHHHHHHHHHTT-CCEEEEECTTS
T ss_pred CCcEEEE---C--C-CHHHHHHHHHHHHCC-CEEEEEeCCcc
Confidence 5789999 7 4 44 67888898888 79998865433
No 34
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=52.31 E-value=11 Score=33.54 Aligned_cols=35 Identities=17% Similarity=0.269 Sum_probs=26.3
Q ss_pred CCeEEEeCCCCCCCccH-H---HHHHHHHhcCCccEEEEecCC
Q 021782 14 KPTIMVTNDDGIDAPGL-R---SLVRVLVSTNRYTVQVCAPDS 52 (307)
Q Consensus 14 ~~~ILlTNDDGi~a~Gi-~---aL~~aL~~~g~~~V~VVAP~~ 52 (307)
.||||+.. .|. -|- + .|+++|.+.| |+|.|+.+..
T Consensus 6 ~mkIl~~~-~~~--gG~~~~~~~la~~L~~~G-~~V~v~~~~~ 44 (364)
T 1f0k_A 6 GKRLMVMA-GGT--GGHVFPGLAVAHHLMAQG-WQVRWLGTAD 44 (364)
T ss_dssp -CEEEEEC-CSS--HHHHHHHHHHHHHHHTTT-CEEEEEECTT
T ss_pred CcEEEEEe-CCC--ccchhHHHHHHHHHHHcC-CEEEEEecCC
Confidence 38999987 232 243 2 7999999999 8999999865
No 35
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=47.98 E-value=12 Score=34.72 Aligned_cols=35 Identities=17% Similarity=0.302 Sum_probs=26.6
Q ss_pred CeEEEeCCCCCCCcc----HHHHHHHHHhcCCccEEEEecCCC
Q 021782 15 PTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (307)
Q Consensus 15 ~~ILlTNDDGi~a~G----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (307)
||||++ +..+.| ..+|+++|++.| |+|+++.+...
T Consensus 1 MrIl~~---~~~~~GH~~p~l~la~~L~~~G-h~V~~~~~~~~ 39 (416)
T 1rrv_A 1 MRVLLS---VCGTRGDVEIGVALADRLKALG-VQTRMCAPPAA 39 (416)
T ss_dssp CEEEEE---EESCHHHHHHHHHHHHHHHHTT-CEEEEEECGGG
T ss_pred CeEEEE---ecCCCccHHHHHHHHHHHHHCC-CeEEEEeCHHH
Confidence 678887 233443 467999999999 89999998753
No 36
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=46.53 E-value=18 Score=33.50 Aligned_cols=35 Identities=20% Similarity=0.356 Sum_probs=27.3
Q ss_pred CeEEEeCCCCCCCcc----HHHHHHHHHhcCCccEEEEecCCC
Q 021782 15 PTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (307)
Q Consensus 15 ~~ILlTNDDGi~a~G----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (307)
||||++. ..+.| ..+|+++|++.| |+|+++.+...
T Consensus 1 M~Il~~~---~~~~GHv~P~l~la~~L~~~G-h~V~~~~~~~~ 39 (415)
T 1iir_A 1 MRVLLAT---CGSRGDTEPLVALAVRVRDLG-ADVRMCAPPDC 39 (415)
T ss_dssp CEEEEEC---CSCHHHHHHHHHHHHHHHHTT-CEEEEEECGGG
T ss_pred CeEEEEc---CCCchhHHHHHHHHHHHHHCC-CeEEEEcCHHH
Confidence 6888883 34443 567999999999 89999998864
No 37
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=46.17 E-value=10 Score=34.74 Aligned_cols=43 Identities=14% Similarity=0.178 Sum_probs=23.3
Q ss_pred cccccCC---CCCCeEEEeCCC----CCCCccHHHHHHHHHhcCCccEEEE
Q 021782 5 GIAIVNS---DHKPTIMVTNDD----GIDAPGLRSLVRVLVSTNRYTVQVC 48 (307)
Q Consensus 5 ~~~~~~~---~~~~~ILlTNDD----Gi~a~Gi~aL~~aL~~~g~~~V~VV 48 (307)
|+-++|+ ++.|||||.|=. +..+.=..+..+.|++.| |+|.|+
T Consensus 10 ~~~~~t~~~~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G-~eV~v~ 59 (280)
T 4gi5_A 10 GVDLGTENLYFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAG-HEVQVS 59 (280)
T ss_dssp ------------CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTT-CEEEEE
T ss_pred ccccCCCcchhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCC-CeEEEE
Confidence 6666774 668999999743 221222456677888888 799887
No 38
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=45.85 E-value=10 Score=34.41 Aligned_cols=37 Identities=14% Similarity=0.089 Sum_probs=26.5
Q ss_pred CeEEEeCCCCC-CCccHHHHHHHHHhcCCccEEEEecCC
Q 021782 15 PTIMVTNDDGI-DAPGLRSLVRVLVSTNRYTVQVCAPDS 52 (307)
Q Consensus 15 ~~ILlTNDDGi-~a~Gi~aL~~aL~~~g~~~V~VVAP~~ 52 (307)
||||+...-+. +---+.+|+++|++.| |+|+++.+..
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~G-h~V~~~~~~~ 38 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAG-HQVVMAANQD 38 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTT-CEEEEEECGG
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCC-CEEEEEeCHH
Confidence 78999865321 0112467999999999 8999998764
No 39
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=45.70 E-value=12 Score=35.34 Aligned_cols=41 Identities=7% Similarity=-0.024 Sum_probs=29.6
Q ss_pred CCCCCeEEEeCCCCCC---Cc---cHHHHHHHHHhcCCccEEEEecCC
Q 021782 11 SDHKPTIMVTNDDGID---AP---GLRSLVRVLVSTNRYTVQVCAPDS 52 (307)
Q Consensus 11 ~~~~~~ILlTNDDGi~---a~---Gi~aL~~aL~~~g~~~V~VVAP~~ 52 (307)
..++|||++.-+.=.. +- -+..|+++|.+.| |+|.|++|..
T Consensus 43 ~~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~G-heV~Vvt~~~ 89 (413)
T 2x0d_A 43 SIKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKK-FKKRIILTDA 89 (413)
T ss_dssp CCCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTT-CEEEEEESSC
T ss_pred CCCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcC-CceEEEEecC
Confidence 4678999887764111 11 2567888888889 8999999974
No 40
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=41.61 E-value=17 Score=28.82 Aligned_cols=82 Identities=16% Similarity=0.187 Sum_probs=50.5
Q ss_pred CCCCeEEEeCCCCCCCccHHHHHHHHHhcCCccEEEEecCCCCCcCcccccCCCCeeeeeccCCCCeeEEecCChHHHHH
Q 021782 12 DHKPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCAS 91 (307)
Q Consensus 12 ~~~~~ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~VVAP~~~~Sg~g~siT~~~pl~v~~~~~~g~~~~~v~GTPaDcV~ 91 (307)
.++|||||.-||-..... |.+.|++.| ++|+- +-.+..++..
T Consensus 6 ~r~~rILiVdD~~~~~~~---l~~~L~~~G-~~v~~----------------------------------~a~~g~eAl~ 47 (123)
T 2lpm_A 6 ERRLRVLVVEDESMIAML---IEDTLCELG-HEVAA----------------------------------TASRMQEALD 47 (123)
T ss_dssp CCCCCEEEESSSTTTSHH---HHHHHHHHC-CCCCB----------------------------------CSCCHHHHHH
T ss_pred CCCCEEEEEeCCHHHHHH---HHHHHHHCC-CEEEE----------------------------------EECCHHHHHH
Confidence 467899999999776654 445566667 23210 1123333333
Q ss_pred HhhhccCCCCCCcEEEecCCCCCcccccccchhhHHHHHHHHHcCCCEEEEEe
Q 021782 92 LGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISY 144 (307)
Q Consensus 92 ~al~~~l~~~~PDLVvSGIN~G~NlG~dv~ySGTVgAA~ea~~~GiPaIAvS~ 144 (307)
+.- ..+|||||.=+|...--|.++ .-.+ ...++|.|.+|.
T Consensus 48 ~~~-----~~~~DlvllDi~mP~~~G~el------~~~l--r~~~ipvI~lTa 87 (123)
T 2lpm_A 48 IAR-----KGQFDIAIIDVNLDGEPSYPV------ADIL--AERNVPFIFATG 87 (123)
T ss_dssp HHH-----HCCSSEEEECSSSSSCCSHHH------HHHH--HHTCCSSCCBCT
T ss_pred HHH-----hCCCCEEEEecCCCCCCHHHH------HHHH--HcCCCCEEEEec
Confidence 322 247999999999876556543 1222 236899999985
No 41
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=40.72 E-value=23 Score=28.68 Aligned_cols=38 Identities=13% Similarity=0.137 Sum_probs=32.5
Q ss_pred CCeEEEeCCCCCCCccHHHHHHHHHhcCCccEEEEecCC
Q 021782 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDS 52 (307)
Q Consensus 14 ~~~ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~VVAP~~ 52 (307)
.|+|++-=-||+...-+...++.|+..| .+|.+++|..
T Consensus 2 ~~ki~il~~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~ 39 (168)
T 3l18_A 2 SMKVLFLSADGFEDLELIYPLHRIKEEG-HEVYVASFQR 39 (168)
T ss_dssp CCEEEEECCTTBCHHHHHHHHHHHHHTT-CEEEEEESSS
T ss_pred CcEEEEEeCCCccHHHHHHHHHHHHHCC-CEEEEEECCC
Confidence 5677666678999999999999999999 5999999975
No 42
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=38.38 E-value=31 Score=29.25 Aligned_cols=43 Identities=19% Similarity=0.266 Sum_probs=31.5
Q ss_pred cCCCCCCeEEEeCCCCCCCccHHHHHHHHHhcCCccEEEEecCC
Q 021782 9 VNSDHKPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDS 52 (307)
Q Consensus 9 ~~~~~~~~ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~VVAP~~ 52 (307)
|+....++|++-==||+...-+...++.|+..| .+|.+++|..
T Consensus 4 ~~~~m~~~v~ill~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~g 46 (208)
T 3ot1_A 4 MEQGMSKRILVPVAHGSEEMETVIIVDTLVRAG-FQVTMAAVGD 46 (208)
T ss_dssp -----CCEEEEEECTTCCHHHHHHHHHHHHHTT-CEEEEEESSS
T ss_pred cccccCCeEEEEECCCCcHHHHHHHHHHHHHCC-CEEEEEEcCC
Confidence 444344466665568999999999999999999 5999999963
No 43
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=38.30 E-value=34 Score=29.51 Aligned_cols=30 Identities=23% Similarity=0.376 Sum_probs=23.9
Q ss_pred CCeEEEeCCCCCCCccH--HHHHHHHHhcCCccEEEEec
Q 021782 14 KPTIMVTNDDGIDAPGL--RSLVRVLVSTNRYTVQVCAP 50 (307)
Q Consensus 14 ~~~ILlTNDDGi~a~Gi--~aL~~aL~~~g~~~V~VVAP 50 (307)
.|+|||| | + |. +.|++.|.+.| ++|+++.-
T Consensus 5 ~~~ilVt---G--a-G~iG~~l~~~L~~~g-~~V~~~~r 36 (286)
T 3ius_A 5 TGTLLSF---G--H-GYTARVLSRALAPQG-WRIIGTSR 36 (286)
T ss_dssp CCEEEEE---T--C-CHHHHHHHHHHGGGT-CEEEEEES
T ss_pred cCcEEEE---C--C-cHHHHHHHHHHHHCC-CEEEEEEc
Confidence 4789999 6 5 65 67889998888 78888754
No 44
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=36.06 E-value=64 Score=26.84 Aligned_cols=40 Identities=15% Similarity=0.100 Sum_probs=32.7
Q ss_pred CCeEEEeCCCCCCCccHHHHHHHHHhcCCccEEEEecCCCC
Q 021782 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEK 54 (307)
Q Consensus 14 ~~~ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~VVAP~~~~ 54 (307)
.++|+|-=-||+....+...++.|+..| .+|.+++|....
T Consensus 23 ~~kV~ill~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~~~ 62 (193)
T 1oi4_A 23 SKKIAVLITDEFEDSEFTSPADEFRKAG-HEVITIEKQAGK 62 (193)
T ss_dssp CCEEEEECCTTBCTHHHHHHHHHHHHTT-CEEEEEESSTTC
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCC-CEEEEEECCCCc
Confidence 3566665568999999999999999999 599999998643
No 45
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=35.37 E-value=64 Score=26.63 Aligned_cols=36 Identities=17% Similarity=0.166 Sum_probs=29.8
Q ss_pred eEEEeCCCCCCCccHHHHHHHHHhcCCccEEEEecCC
Q 021782 16 TIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDS 52 (307)
Q Consensus 16 ~ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~VVAP~~ 52 (307)
+|++-=-||+....+...++.|+..| .+|.+++|..
T Consensus 7 kv~ill~~g~~~~e~~~~~~~l~~ag-~~v~~~s~~~ 42 (190)
T 4e08_A 7 SALVILAPGAEEMEFIIAADVLRRAG-IKVTVAGLNG 42 (190)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHTT-CEEEEEESSS
T ss_pred EEEEEECCCchHHHHHHHHHHHHHCC-CEEEEEECCC
Confidence 44443349999999999999999999 5999999976
No 46
>3u27_C Microcompartments protein; structural genomics, PSI-biology, MCSG, alpha-beta-alpha FOL bacterial microcompartment, shell protein; 1.85A {Leptotrichia buccalis c-1013-b}
Probab=35.13 E-value=13 Score=33.16 Aligned_cols=105 Identities=15% Similarity=0.058 Sum_probs=69.8
Q ss_pred CccHHHHHHHHHhcCCccEEEEecCCCCCcCccccc-CCCCee-------eeec--------------------------
Q 021782 27 APGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSIT-WRHPIS-------ARPA-------------------------- 72 (307)
Q Consensus 27 a~Gi~aL~~aL~~~g~~~V~VVAP~~~~Sg~g~siT-~~~pl~-------v~~~-------------------------- 72 (307)
+++|.+.=+++++. +|-++-+..-+-|.||+.. +...+- +..+
T Consensus 48 ~~~I~AaD~A~KaA---~Vel~~~r~~~gg~g~~~~~~~G~~i~iigG~dvs~V~~av~~~~~~~~~~~~~~~~~~~gh~ 124 (220)
T 3u27_C 48 DVTYTALDEATKKA---VVDVAYGKSFYGGAANANTKLAGEVIGILSGPTPAEVKSGLAAAVDFIENEAAFISANDDDSI 124 (220)
T ss_dssp HHHHHHHHHHHHHS---SCEEEEEEECTTCGGGCCSTTTTTEEEEEEESSHHHHHHHHHHHHHHHHHTCCEEECSTTSCC
T ss_pred hHHHHHHHHHHhhc---CeEEEEEeeccccCcccccccCccEEEEecCCCHHHHHHHHHHHHHHHHhhHhheeccCCCCe
Confidence 56888888888764 7888888888888888864 222111 0000
Q ss_pred ------------------cCCCCeeE-EecCChHHHHHHhhhccCCCCCCcEE-EecCCCCCcccccccchhhHHHHHHH
Q 021782 73 ------------------DFDGVTAY-AVSGTPADCASLGVSQALFPSVPDLV-ISGINMGSNCGYHVVYSGTVAGAREA 132 (307)
Q Consensus 73 ------------------~~~g~~~~-~v~GTPaDcV~~al~~~l~~~~PDLV-vSGIN~G~NlG~dv~ySGTVgAA~ea 132 (307)
..+...++ .+.++|+ ...+|.+..+.-...+|+ +..|..|.+.|. ++.+|.|||..+|
T Consensus 125 ~~~ah~ia~~~~al~~~~g~~~g~AiGil~~~p~-~ai~aaD~A~KaA~V~l~~~~~p~~~~~~~g-~~itGdvsAV~aA 202 (220)
T 3u27_C 125 AYFAHCISRTGTYLSKTAGIPEGESLAYLIAPPL-EAMYALDVALKAADVRLVAFYGPPSETNFGG-GLLTGSQSACKAA 202 (220)
T ss_dssp EEEEEEESSCCHHHHHHHTSCTTCCEEEEEESHH-HHHHHHHHHHHHSSCEEEEEECSCCTTSCEE-EEEESCHHHHHHH
T ss_pred EEEEeecCCcHHHHHHhcCCCCcceEEEEEcCCH-HHHHHHHHHHhhCCeEEEEEEcccCcCcEEE-EEEEEcHHHHHHH
Confidence 00011122 2678999 888888864433578888 577778888877 8899999998887
Q ss_pred HHcC
Q 021782 133 FFHG 136 (307)
Q Consensus 133 ~~~G 136 (307)
...|
T Consensus 203 v~a~ 206 (220)
T 3u27_C 203 CDAF 206 (220)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7543
No 47
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=33.07 E-value=29 Score=26.11 Aligned_cols=86 Identities=15% Similarity=0.088 Sum_probs=45.8
Q ss_pred cCCCCCCeEEEeCCCCCCCccHHHHHHHHHhcCCccEEEEecCCCCCcCcccccCCCCeeeeeccCCCCeeEEecCChHH
Q 021782 9 VNSDHKPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPAD 88 (307)
Q Consensus 9 ~~~~~~~~ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~VVAP~~~~Sg~g~siT~~~pl~v~~~~~~g~~~~~v~GTPaD 88 (307)
|+.++.++|||..||-.... .|.+.|.+.|+ +|. +-.+..+
T Consensus 1 M~~~~~~~iLivdd~~~~~~---~l~~~l~~~g~-~v~-----------------------------------~~~~~~~ 41 (140)
T 3grc_A 1 MSLAPRPRILICEDDPDIAR---LLNLMLEKGGF-DSD-----------------------------------MVHSAAQ 41 (140)
T ss_dssp ----CCSEEEEECSCHHHHH---HHHHHHHHTTC-EEE-----------------------------------EECSHHH
T ss_pred CCCCCCCCEEEEcCCHHHHH---HHHHHHHHCCC-eEE-----------------------------------EECCHHH
Confidence 55566789999999865443 34455555552 221 1123344
Q ss_pred HHHHhhhccCCCCCCcEEEecCCCCCcccccccchhhHHHHHHH--HHcCCCEEEEEe
Q 021782 89 CASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREA--FFHGVPSVSISY 144 (307)
Q Consensus 89 cV~~al~~~l~~~~PDLVvSGIN~G~NlG~dv~ySGTVgAA~ea--~~~GiPaIAvS~ 144 (307)
+....- ..+||+||..++...--|.++ -..+.. ....+|.|.+|.
T Consensus 42 a~~~l~-----~~~~dlvi~d~~l~~~~g~~~------~~~l~~~~~~~~~~ii~~s~ 88 (140)
T 3grc_A 42 ALEQVA-----RRPYAAMTVDLNLPDQDGVSL------IRALRRDSRTRDLAIVVVSA 88 (140)
T ss_dssp HHHHHH-----HSCCSEEEECSCCSSSCHHHH------HHHHHTSGGGTTCEEEEECT
T ss_pred HHHHHH-----hCCCCEEEEeCCCCCCCHHHH------HHHHHhCcccCCCCEEEEec
Confidence 433322 236999999988764333221 112222 345789998885
No 48
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=31.54 E-value=29 Score=25.68 Aligned_cols=30 Identities=27% Similarity=0.378 Sum_probs=16.2
Q ss_pred cCCCCCCeEEEeCCCCCCCccHHHHHHHHHhcC
Q 021782 9 VNSDHKPTIMVTNDDGIDAPGLRSLVRVLVSTN 41 (307)
Q Consensus 9 ~~~~~~~~ILlTNDDGi~a~Gi~aL~~aL~~~g 41 (307)
|+..+.++|||..||-..... |.+.|.+.|
T Consensus 1 M~~~~~~~ilivdd~~~~~~~---l~~~L~~~g 30 (132)
T 3lte_A 1 MSLKQSKRILVVDDDQAMAAA---IERVLKRDH 30 (132)
T ss_dssp ------CEEEEECSCHHHHHH---HHHHHHHTT
T ss_pred CCCCCCccEEEEECCHHHHHH---HHHHHHHCC
Confidence 455667899999998655443 445555555
No 49
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=31.37 E-value=37 Score=31.52 Aligned_cols=40 Identities=13% Similarity=0.184 Sum_probs=25.3
Q ss_pred cccCCCCCCeEEEeCCCCCCC--c-cHHHHHHHHHhcCCccEEEE
Q 021782 7 AIVNSDHKPTIMVTNDDGIDA--P-GLRSLVRVLVSTNRYTVQVC 48 (307)
Q Consensus 7 ~~~~~~~~~~ILlTNDDGi~a--~-Gi~aL~~aL~~~g~~~V~VV 48 (307)
+.|+..++||||+.+..++.. + ....+++.|.+.| +|.|+
T Consensus 7 ~~~~~~~~MkIl~is~~~~p~~~~~~~~~l~~~l~~~G--~V~vi 49 (406)
T 2hy7_A 7 APASGIRRPCYLVLSSHDFRTPRRANIHFITDQLALRG--TTRFF 49 (406)
T ss_dssp ------CCSCEEEEESSCTTSSSCCHHHHHHHHHHHHS--CEEEE
T ss_pred CCCCCCCCceEEEEecccCCChhhhhHhHHHHHHHhCC--ceEEE
Confidence 346777789999988774331 1 2356888898888 99999
No 50
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=30.12 E-value=96 Score=26.13 Aligned_cols=31 Identities=16% Similarity=0.194 Sum_probs=27.4
Q ss_pred CCCCCccHHHHHHHHHhcCCccEEEEecCCCC
Q 021782 23 DGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEK 54 (307)
Q Consensus 23 DGi~a~Gi~aL~~aL~~~g~~~V~VVAP~~~~ 54 (307)
||+...-+...++.|+..| .+|.+++|....
T Consensus 24 ~G~~~~e~~~p~~~l~~ag-~~v~~vs~~~~~ 54 (224)
T 1u9c_A 24 TGLWLEEFAVPYLVFQEKG-YDVKVASIQGGE 54 (224)
T ss_dssp CCBCHHHHHHHHHHHHHTT-CEEEEEESSCBC
T ss_pred CceeHHHHHHHHHHHHHCC-CeEEEECCCCCc
Confidence 8888888999999999999 599999998753
No 51
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=30.07 E-value=50 Score=27.13 Aligned_cols=40 Identities=15% Similarity=0.189 Sum_probs=33.1
Q ss_pred CCCeEEEeCCCCCCCccHHHHHHHHHhcCCccEEEEecCCC
Q 021782 13 HKPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSE 53 (307)
Q Consensus 13 ~~~~ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~VVAP~~~ 53 (307)
+.++|+|-=-||+....+...++.|+..| .+|.+++|...
T Consensus 8 ~~~~v~il~~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~~ 47 (190)
T 2vrn_A 8 TGKKIAILAADGVEEIELTSPRAAIEAAG-GTTELISLEPG 47 (190)
T ss_dssp TTCEEEEECCTTCBHHHHHHHHHHHHHTT-CEEEEEESSSS
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHHCC-CEEEEEecCCC
Confidence 35677666669999889999999999998 59999999864
No 52
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=29.81 E-value=1.9e+02 Score=30.21 Aligned_cols=39 Identities=8% Similarity=0.218 Sum_probs=26.2
Q ss_pred CCCCeEEEeCCCCC----------CCcc----HH--------HHHHHHHhcCCccEE----EEecC
Q 021782 12 DHKPTIMVTNDDGI----------DAPG----LR--------SLVRVLVSTNRYTVQ----VCAPD 51 (307)
Q Consensus 12 ~~~~~ILlTNDDGi----------~a~G----i~--------aL~~aL~~~g~~~V~----VVAP~ 51 (307)
+..++|++-++.|. ++=| +. .|+++|.+.| |+|+ |+...
T Consensus 276 ~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G-~~V~~~V~v~Tr~ 340 (816)
T 3s28_A 276 PMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQG-LNIKPRILILTRL 340 (816)
T ss_dssp CCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTT-CCCCCEEEEEEEC
T ss_pred CceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCC-CccceeeEEEeCC
Confidence 34789999999997 2323 33 3556677789 7775 66444
No 53
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=29.53 E-value=2.3e+02 Score=23.07 Aligned_cols=104 Identities=20% Similarity=0.189 Sum_probs=56.9
Q ss_pred CeEEEeCCCCCCCccHHHHHHHHHhcCCccEEEEecCCCCCcCcccccCCCCeeeeeccCCCCeeEEecCCh-HHHHHHh
Q 021782 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTP-ADCASLG 93 (307)
Q Consensus 15 ~~ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~VVAP~~~~Sg~g~siT~~~pl~v~~~~~~g~~~~~v~GTP-aDcV~~a 93 (307)
|+||||==-|. -| ++|++.|.+.| ++|+++.-..++-. . + . +...+.+|=+= .+.+.-+
T Consensus 1 M~ilItGatG~--iG-~~l~~~L~~~g-~~V~~~~R~~~~~~--~---~-~----------~~~~~~~D~~d~~~~~~~~ 60 (219)
T 3dqp_A 1 MKIFIVGSTGR--VG-KSLLKSLSTTD-YQIYAGARKVEQVP--Q---Y-N----------NVKAVHFDVDWTPEEMAKQ 60 (219)
T ss_dssp CEEEEESTTSH--HH-HHHHHHHTTSS-CEEEEEESSGGGSC--C---C-T----------TEEEEECCTTSCHHHHHTT
T ss_pred CeEEEECCCCH--HH-HHHHHHHHHCC-CEEEEEECCccchh--h---c-C----------CceEEEecccCCHHHHHHH
Confidence 68999932221 22 67888898888 78888864332110 0 0 1 11222333222 3333333
Q ss_pred hhccCCCCCCcEEEecCCCCCcccccccchhhHHHHHHHHHcCCCEEE-EEe
Q 021782 94 VSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVS-ISY 144 (307)
Q Consensus 94 l~~~l~~~~PDLVvSGIN~G~NlG~dv~ySGTVgAA~ea~~~GiPaIA-vS~ 144 (307)
+ . .+|.||.-.-....--.++.+.||.-.+..+...|++-|- +|.
T Consensus 61 ~-----~-~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 61 L-----H-GMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp T-----T-TCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred H-----c-CCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 2 2 5899996444433333456778887666666667886544 554
No 54
>3gfh_A Ethanolamine utilization protein EUTL; bacterial mircocompartment, shell protein, structural protein; 2.20A {Escherichia coli} PDB: 3mpv_A 3i87_A 3i82_A
Probab=29.50 E-value=7.4 Score=34.87 Aligned_cols=50 Identities=20% Similarity=0.226 Sum_probs=37.1
Q ss_pred ecCChHHHHHHhhhccCCCCCCcEE-EecCCCCCcccccccchhhHHHHHHHH
Q 021782 82 VSGTPADCASLGVSQALFPSVPDLV-ISGINMGSNCGYHVVYSGTVAGAREAF 133 (307)
Q Consensus 82 v~GTPaDcV~~al~~~l~~~~PDLV-vSGIN~G~NlG~dv~ySGTVgAA~ea~ 133 (307)
+.++|+ ...+|.+..+.-...+|+ +..|..|.+.|. ++.+|.|||..+|.
T Consensus 151 l~~~p~-~aI~aaD~A~KaA~V~l~~~~~p~~g~~~~g-~~itGdvsAV~aAv 201 (225)
T 3gfh_A 151 LVAPPL-EATYGIDAALKSADVQLATYVPPPSETNYSA-AFLTGSQAACKAAC 201 (225)
T ss_dssp EEECHH-HHHHHHHHHHHHSCCEEEEEECSCCTTSCEE-EEEESCSSSTTHHH
T ss_pred EEcCcH-HHHHHHHHHHhhCCeEEEEEEcccCcCcEEE-EEEEEcHHHHHHHH
Confidence 578999 888888864433568888 777777888777 77888887766665
No 55
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=28.94 E-value=36 Score=33.42 Aligned_cols=42 Identities=17% Similarity=0.314 Sum_probs=29.2
Q ss_pred CCCCeEEEeCCC-CC--CCccH----HHHHHHHHhcCCccEEEEecCCCC
Q 021782 12 DHKPTIMVTNDD-GI--DAPGL----RSLVRVLVSTNRYTVQVCAPDSEK 54 (307)
Q Consensus 12 ~~~~~ILlTNDD-Gi--~a~Gi----~aL~~aL~~~g~~~V~VVAP~~~~ 54 (307)
...||||..-=- -. .+=|| .+|.++|.+.| |+|.|+.|.-.+
T Consensus 7 ~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G-~~V~Vi~P~Y~~ 55 (536)
T 3vue_A 7 HHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANG-HRVMVISPRYDQ 55 (536)
T ss_dssp -CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTT-CEEEEEEECCSC
T ss_pred CCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcC-CeEEEEecCchh
Confidence 457999987321 00 12243 68999999999 899999997643
No 56
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=28.93 E-value=13 Score=33.29 Aligned_cols=38 Identities=18% Similarity=0.227 Sum_probs=24.2
Q ss_pred CCCeEEEeCCCCC-CCcc----HHHHHHHHHhcCCccEEEEecCCC
Q 021782 13 HKPTIMVTNDDGI-DAPG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (307)
Q Consensus 13 ~~~~ILlTNDDGi-~a~G----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (307)
++||||+..+.=. ..-| +..|++.| .| |+|.|+++...
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g-~~v~v~~~~~~ 45 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DP-ESIVVFASTQN 45 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CG-GGEEEEEECSS
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cC-CeEEEEECCCC
Confidence 4688888776322 1234 44555655 36 79999999764
No 57
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=28.18 E-value=56 Score=28.84 Aligned_cols=34 Identities=6% Similarity=0.045 Sum_probs=27.2
Q ss_pred CCeEEEeCCCCCCCccHHHHHHHHHhcCCccEEEEecCCC
Q 021782 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSE 53 (307)
Q Consensus 14 ~~~ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~VVAP~~~ 53 (307)
+|+|||..-. --+.+++++++.| ++|+++.|..+
T Consensus 2 ~m~Ililg~g-----~~~~l~~a~~~~G-~~v~~~~~~~~ 35 (334)
T 2r85_A 2 KVRIATYASH-----SALQILKGAKDEG-FETIAFGSSKV 35 (334)
T ss_dssp CSEEEEESST-----THHHHHHHHHHTT-CCEEEESCGGG
T ss_pred ceEEEEECCh-----hHHHHHHHHHhCC-CEEEEEECCCC
Confidence 4789999765 3467889999999 69999988753
No 58
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=28.07 E-value=22 Score=36.78 Aligned_cols=35 Identities=17% Similarity=0.116 Sum_probs=30.6
Q ss_pred EEEeCCCCCCCccHHHHHHHHHhcCCccEEEEecCC
Q 021782 17 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDS 52 (307)
Q Consensus 17 ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~VVAP~~ 52 (307)
||++..||....-+.++.++|++.| .+|.||+|..
T Consensus 534 IL~a~~dGfe~~E~~~~~~~L~~aG-~~V~vVs~~~ 568 (688)
T 2iuf_A 534 LLASVNKPASIAQGAKLQVALSSVG-VDVVVVAERX 568 (688)
T ss_dssp EECCTTCHHHHHHHHHHHHHHGGGT-CEEEEEESSC
T ss_pred EEecCCCCCcHHHHHHHHHHHHHCC-CEEEEEeccC
Confidence 6666669999889999999999999 6999999963
No 59
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=27.68 E-value=97 Score=26.79 Aligned_cols=36 Identities=6% Similarity=0.087 Sum_probs=26.5
Q ss_pred CCCCeEEEeCCCCCC-CccH-HHHHHHHHhcCCccEEEEecC
Q 021782 12 DHKPTIMVTNDDGID-APGL-RSLVRVLVSTNRYTVQVCAPD 51 (307)
Q Consensus 12 ~~~~~ILlTNDDGi~-a~Gi-~aL~~aL~~~g~~~V~VVAP~ 51 (307)
.+..+|||| |-. +-|| +++++.|.+.| ++|+++.-.
T Consensus 4 l~~k~vlVT---Gas~~~gIG~~~a~~l~~~G-~~V~~~~r~ 41 (275)
T 2pd4_A 4 LKGKKGLIV---GVANNKSIAYGIAQSCFNQG-ATLAFTYLN 41 (275)
T ss_dssp TTTCEEEEE---CCCSTTSHHHHHHHHHHTTT-CEEEEEESS
T ss_pred CCCCEEEEE---CCCCCCcHHHHHHHHHHHCC-CEEEEEeCC
Confidence 345679999 433 2466 68999999999 788888654
No 60
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=27.37 E-value=1.7e+02 Score=27.89 Aligned_cols=42 Identities=24% Similarity=0.135 Sum_probs=27.4
Q ss_pred CCcEEEecCCCCCcccccccchhhHHHHHHHHHcCCCEEEEEee
Q 021782 102 VPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYD 145 (307)
Q Consensus 102 ~PDLVvSGIN~G~NlG~dv~ySGTVgAA~ea~~~GiPaIAvS~~ 145 (307)
.-||||.| .|.-=.....=.-.+|-|..|..+|+|.|||+-.
T Consensus 287 ~ADLVITG--EG~~D~Qtl~GK~p~gVa~~A~~~~vPviaiaG~ 328 (383)
T 3cwc_A 287 DADLVITG--EGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGS 328 (383)
T ss_dssp HCSEEEEC--CEESCC----CHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCEEEEC--CCCCcCcCCCCcHHHHHHHHHHHhCCCEEEEeCC
Confidence 57999998 3332222222233458888899999999999853
No 61
>4g41_A MTA/SAH nucleosidase; mixed alpha/beta, hydrolase, S-adenosylhomocysteine, cleavag; HET: MTA; 1.45A {Streptococcus pyogenes}
Probab=26.47 E-value=2.3e+02 Score=23.91 Aligned_cols=46 Identities=17% Similarity=0.127 Sum_probs=25.5
Q ss_pred HHHHHHHHHcCCCEEEEEeecC-CCCCCCCccHH----HHHHHHHHHHHHH
Q 021782 126 VAGAREAFFHGVPSVSISYDWV-GGKSNVNDYTL----AAEACLPIINAIL 171 (307)
Q Consensus 126 VgAA~ea~~~GiPaIAvS~~~~-~~~~~~~~~~~----aa~~~~~li~~l~ 171 (307)
.|-|.-|..+|+|.+++..-+. .+.....+|+. |++.+.+++.+++
T Consensus 181 aa~~~va~~~~~p~~~Ir~ISD~ad~~~~~~~~~~~~~Aa~~~a~~v~~~l 231 (236)
T 4g41_A 181 AAIAQAAHTAGKPFIVVRAMSDTAAHDANITFDQFIIEAGKRSAQILMTFL 231 (236)
T ss_dssp HHHHHHHHHTTCCEEEEEEESSCTTCCCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEEEeCCCCcCcccHHHHHHHHHHHHHHHHHHHH
Confidence 3445556689999999975321 11122345553 4555555555555
No 62
>2cve_A Hypothetical protein TTHA1053; COG1739, UPF0029, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: TLA; 1.60A {Thermus thermophilus} SCOP: d.14.1.11 d.58.11.2
Probab=24.47 E-value=51 Score=28.59 Aligned_cols=30 Identities=23% Similarity=0.190 Sum_probs=23.0
Q ss_pred EeCCCCCCC--ccHHHHHHHHHhcCCccEEEEe
Q 021782 19 VTNDDGIDA--PGLRSLVRVLVSTNRYTVQVCA 49 (307)
Q Consensus 19 lTNDDGi~a--~Gi~aL~~aL~~~g~~~V~VVA 49 (307)
=.||||-.+ .|...|. .|+..+..+|.||.
T Consensus 59 ~~~DDGEp~GTAG~piL~-~L~~~~l~nv~vVV 90 (191)
T 2cve_A 59 RFSDDGEPSGTAGRPILH-AIEAQGLDRVAVLV 90 (191)
T ss_dssp EEECTTSSTTSSHHHHHH-HHHHTTBCSEEEEE
T ss_pred ccCCCCCcCCcChHHHHH-HHHHcCCCcEEEEE
Confidence 469999988 9987654 57777777887773
No 63
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=24.31 E-value=49 Score=27.60 Aligned_cols=44 Identities=16% Similarity=0.249 Sum_probs=33.1
Q ss_pred CCCCeEEEeCCCCCCCcc-HHHHHHHHHhcCCccEEEEecCCCCCc
Q 021782 12 DHKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDSEKSA 56 (307)
Q Consensus 12 ~~~~~ILlTNDDGi~a~G-i~aL~~aL~~~g~~~V~VVAP~~~~Sg 56 (307)
.+..+|||. ||.+.+=+ +++.++.|++.|...|.++++..-.++
T Consensus 96 ~~gk~VllV-DDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~ 140 (185)
T 2geb_A 96 IEGKDVLIV-EDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPER 140 (185)
T ss_dssp CTTSEEEEE-EEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGG
T ss_pred CCCCEEEEE-CCccCCHHHHHHHHHHHHhcCCCEEEEEEEEECCCc
Confidence 346789998 99888743 678889999998668888887754443
No 64
>3bsf_A AT4G34840, nucleosidase; alpha-beta, hydrolase; HET: ADE; 2.90A {Arabidopsis thaliana}
Probab=24.22 E-value=2.1e+02 Score=24.71 Aligned_cols=52 Identities=17% Similarity=0.117 Sum_probs=29.3
Q ss_pred hHHHHHHHHHcCCCEEEEEee--cCCCCC-CCCc----cHHHHHHHHHHHHHHHHHHHh
Q 021782 125 TVAGAREAFFHGVPSVSISYD--WVGGKS-NVND----YTLAAEACLPIINAILAEIRN 176 (307)
Q Consensus 125 TVgAA~ea~~~GiPaIAvS~~--~~~~~~-~~~~----~~~aa~~~~~li~~l~~~~~~ 176 (307)
+.+-|.-|..+|+|.+++..- +..... ...+ .+.|++.+.+++.++++.+..
T Consensus 190 ~aa~a~va~~~~ip~~~Ir~ISD~a~~~~~s~~~~~~~~~~a~~~~~~~l~~~l~~l~~ 248 (254)
T 3bsf_A 190 GAAVAYVADIFKVPTILIKGVTDIVDGNRPTSEEFLENLAAVTAKLDESLTKVIDFISG 248 (254)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEEETTTTCCSTTTTTSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCEEEEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 445555666899999999742 221111 1222 345556666666666665543
No 65
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=24.20 E-value=45 Score=29.00 Aligned_cols=30 Identities=7% Similarity=0.104 Sum_probs=24.9
Q ss_pred CCCCCccHHHHHHHHHhcCCccEEEEecCCC
Q 021782 23 DGIDAPGLRSLVRVLVSTNRYTVQVCAPDSE 53 (307)
Q Consensus 23 DGi~a~Gi~aL~~aL~~~g~~~V~VVAP~~~ 53 (307)
+|+...-+...++.|++.| .+|.+++|...
T Consensus 24 ~G~~~~E~~~p~~vl~~ag-~~v~~~s~~g~ 53 (243)
T 1rw7_A 24 TGVFVVEALHPFNTFRKEG-FEVDFVSETGK 53 (243)
T ss_dssp CCBCHHHHHHHHHHHHHTT-CEEEEECSSSC
T ss_pred CccCHHHHHHHHHHHHHCC-CEEEEECCCCC
Confidence 6666667778899999999 69999999864
No 66
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=24.19 E-value=88 Score=25.40 Aligned_cols=33 Identities=12% Similarity=0.146 Sum_probs=22.7
Q ss_pred CeEEEeCCCCCCCccHHHHHHHHHhcCCccEEEEecC
Q 021782 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPD 51 (307)
Q Consensus 15 ~~ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~VVAP~ 51 (307)
|+||||==-|. -| ++|++.|.+.| ++|+++.-.
T Consensus 1 MkvlVtGatG~--iG-~~l~~~L~~~g-~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGATGR--AG-SRILEEAKNRG-HEVTAIVRN 33 (221)
T ss_dssp CEEEEETTTSH--HH-HHHHHHHHHTT-CEEEEEESC
T ss_pred CeEEEEcCCch--hH-HHHHHHHHhCC-CEEEEEEcC
Confidence 68999822111 12 67888898888 799888654
No 67
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=23.78 E-value=57 Score=28.13 Aligned_cols=42 Identities=17% Similarity=0.291 Sum_probs=31.5
Q ss_pred CCCeEEEeCCCCCCCcc-HHHHHHHHHhcCCccEEEEecCCCCC
Q 021782 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDSEKS 55 (307)
Q Consensus 13 ~~~~ILlTNDDGi~a~G-i~aL~~aL~~~g~~~V~VVAP~~~~S 55 (307)
+..+|||. ||.+.+=+ ++++.+.|++.|..+|.++++-.-++
T Consensus 125 ~gk~VliV-DDii~TG~Tl~~~~~~L~~~g~~~v~~~~l~~k~~ 167 (217)
T 1z7g_A 125 TGKNVLIV-EDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRT 167 (217)
T ss_dssp TTSEEEEE-EEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred CCCEEEEE-eceeCcHHHHHHHHHHHHhcCCCEEEEEEEEECcc
Confidence 45678888 99998743 67888999998866777777754333
No 68
>1vi7_A Hypothetical protein YIGZ; structural genomics, unknown function; 2.80A {Escherichia coli} SCOP: d.14.1.11 d.58.11.2
Probab=23.75 E-value=58 Score=28.78 Aligned_cols=30 Identities=23% Similarity=0.231 Sum_probs=23.3
Q ss_pred EeCCCCCCC--ccHHHHHHHHHhcCCccEEEEe
Q 021782 19 VTNDDGIDA--PGLRSLVRVLVSTNRYTVQVCA 49 (307)
Q Consensus 19 lTNDDGi~a--~Gi~aL~~aL~~~g~~~V~VVA 49 (307)
=.||||-.+ .|...|. .|+..+..+|.||.
T Consensus 71 ~~sDDGEp~GTAG~piL~-~L~~~~l~nv~vVV 102 (217)
T 1vi7_A 71 GFSDDGEPAGTAGKPMLA-QLMGSGVGEITAVV 102 (217)
T ss_dssp EEECTTSCTTSSSHHHHH-HHHHHTCCSEEEEC
T ss_pred ccCCCCCCCCcchHHHHH-HHHHcCCCCEEEEE
Confidence 369999988 9988665 57777777888873
No 69
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=23.74 E-value=63 Score=25.63 Aligned_cols=39 Identities=21% Similarity=0.233 Sum_probs=25.2
Q ss_pred CCCcEEEecCCCCCcccccccchhhHHHHHHH--HHcCCCEEEEEee
Q 021782 101 SVPDLVISGINMGSNCGYHVVYSGTVAGAREA--FFHGVPSVSISYD 145 (307)
Q Consensus 101 ~~PDLVvSGIN~G~NlG~dv~ySGTVgAA~ea--~~~GiPaIAvS~~ 145 (307)
.+|||||.-+|.-.=-|.+ +-..+.+ ....+|.|.+|..
T Consensus 56 ~~~DlillD~~MP~mdG~e------l~~~ir~~~~~~~ipvI~lTa~ 96 (134)
T 3to5_A 56 GDFDFVVTDWNMPGMQGID------LLKNIRADEELKHLPVLMITAE 96 (134)
T ss_dssp HCCSEEEEESCCSSSCHHH------HHHHHHHSTTTTTCCEEEEESS
T ss_pred CCCCEEEEcCCCCCCCHHH------HHHHHHhCCCCCCCeEEEEECC
Confidence 3699999999885433433 2223322 2468999999963
No 70
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=23.38 E-value=61 Score=23.81 Aligned_cols=38 Identities=26% Similarity=0.246 Sum_probs=21.4
Q ss_pred CCCcEEEecCCCCCcccccccchhhHHHHHHHHHcCCCEEEEEe
Q 021782 101 SVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISY 144 (307)
Q Consensus 101 ~~PDLVvSGIN~G~NlG~dv~ySGTVgAA~ea~~~GiPaIAvS~ 144 (307)
.+||+||..++....-|.++ -..+......+|.|.+|.
T Consensus 50 ~~~dlvi~d~~l~~~~g~~~------~~~l~~~~~~~~ii~~t~ 87 (130)
T 3eod_A 50 FTPDLMICDIAMPRMNGLKL------LEHIRNRGDQTPVLVISA 87 (130)
T ss_dssp CCCSEEEECCC-----CHHH------HHHHHHTTCCCCEEEEEC
T ss_pred CCCCEEEEecCCCCCCHHHH------HHHHHhcCCCCCEEEEEc
Confidence 46999999988765444332 122233345789999885
No 71
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=23.33 E-value=1.1e+02 Score=26.23 Aligned_cols=39 Identities=18% Similarity=0.213 Sum_probs=27.8
Q ss_pred cCCCCCCeEEEeCCCCC-CCccH-HHHHHHHHhcCCccEEEEecC
Q 021782 9 VNSDHKPTIMVTNDDGI-DAPGL-RSLVRVLVSTNRYTVQVCAPD 51 (307)
Q Consensus 9 ~~~~~~~~ILlTNDDGi-~a~Gi-~aL~~aL~~~g~~~V~VVAP~ 51 (307)
|...+...+||| |- .+-|| +++++.|.+.| ++|+++.-.
T Consensus 2 m~~l~~k~vlVT---Ga~~s~gIG~aia~~l~~~G-~~V~~~~r~ 42 (269)
T 2h7i_A 2 TGLLDGKRILVS---GIITDSSIAFHIARVAQEQG-AQLVLTGFD 42 (269)
T ss_dssp CCTTTTCEEEEC---CCSSTTSHHHHHHHHHHHTT-CEEEEEECS
T ss_pred ccccCCCEEEEE---CCCCCCchHHHHHHHHHHCC-CEEEEEecC
Confidence 333446779999 43 25577 78999999999 688887643
No 72
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=23.01 E-value=73 Score=32.90 Aligned_cols=39 Identities=15% Similarity=0.014 Sum_probs=29.7
Q ss_pred CCeEEEeCCCC-CCCccHHHHHHHHHhcCCccEEEEecCCC
Q 021782 14 KPTIMVTNDDG-IDAPGLRSLVRVLVSTNRYTVQVCAPDSE 53 (307)
Q Consensus 14 ~~~ILlTNDDG-i~a~Gi~aL~~aL~~~g~~~V~VVAP~~~ 53 (307)
..+|.|-=.|| ....-+..+.++|++.| ++|.||+|...
T Consensus 537 grKVaILvadG~fE~~El~~p~~aL~~aG-a~V~vVsp~~g 576 (688)
T 3ej6_A 537 TLRVGVLSTTKGGSLDKAKALKEQLEKDG-LKVTVIAEYLA 576 (688)
T ss_dssp TCEEEEECCSSSSHHHHHHHHHHHHHHTT-CEEEEEESSCC
T ss_pred CCEEEEEccCCCccHHHHHHHHHHHHHCC-CEEEEEeCCCC
Confidence 45554444467 55558899999999999 79999999764
No 73
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=22.91 E-value=57 Score=28.86 Aligned_cols=89 Identities=13% Similarity=0.017 Sum_probs=53.8
Q ss_pred CCeEEEeCCCCCCCcc---HHHHHHHHHhcCCccEEEEecCCCCCcCcccccCCCCeeeeeccCCCCeeEEecCChHHHH
Q 021782 14 KPTIMVTNDDGIDAPG---LRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCA 90 (307)
Q Consensus 14 ~~~ILlTNDDGi~a~G---i~aL~~aL~~~g~~~V~VVAP~~~~Sg~g~siT~~~pl~v~~~~~~g~~~~~v~GTPaDcV 90 (307)
.|+|-|-||++..-.. ...|.+.|++.| |+|.=+-+. +. ... .++ .|-=+.
T Consensus 3 ~MkIaigsDha~~lK~~~i~~~l~~~L~~~G-~eV~D~G~~----------~~-----------~~~---~~d-Ypd~a~ 56 (214)
T 3ono_A 3 AMKIALMMENSQAAKNAMVAGELNSVAGGLG-HDVFNVGMT----------DE-----------NDH---HLT-YIHLGI 56 (214)
T ss_dssp CCEEEECCCGGGGGGHHHHHHHHHHHHHHTT-CEEEECSCS----------ST-----------TSS---CCC-HHHHHH
T ss_pred ccEEEEECCCcHHHHChhHHHHHHHHHHHCC-CEEEEcCCC----------CC-----------CCC---CCC-HHHHHH
Confidence 6999999999933333 237899999998 788765320 00 000 133 566666
Q ss_pred HHhhhccCCCCCCcEEEecCCCCCcccccccchhhHHHHHHHH-HcCCCEEEE
Q 021782 91 SLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAF-FHGVPSVSI 142 (307)
Q Consensus 91 ~~al~~~l~~~~PDLVvSGIN~G~NlG~dv~ySGTVgAA~ea~-~~GiPaIAv 142 (307)
.+|.. +...+.|+.|-..-.| +|.++.|. ..||.+--+
T Consensus 57 ~vA~~--V~~g~~d~GIliCGTG------------iG~siaANKv~GIRAAlc 95 (214)
T 3ono_A 57 MASIL--LNSKAVDFVVTGCGTG------------QGALMSCNLHPGVVCGYC 95 (214)
T ss_dssp HHHHH--HHTTSCSEEEEEESSS------------HHHHHHHHTSTTCCEEEC
T ss_pred HHHHH--HHcCCCCEEEEEcCCc------------HHHHHHHhcCCCeEEEEe
Confidence 66664 2345667766554333 48888777 456666433
No 74
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=22.76 E-value=1.7e+02 Score=23.89 Aligned_cols=37 Identities=14% Similarity=0.056 Sum_probs=28.5
Q ss_pred eEEEeCCCCCCCccHHHHHHHHHh-cCCccEEEEecCCC
Q 021782 16 TIMVTNDDGIDAPGLRSLVRVLVS-TNRYTVQVCAPDSE 53 (307)
Q Consensus 16 ~ILlTNDDGi~a~Gi~aL~~aL~~-~g~~~V~VVAP~~~ 53 (307)
+|++-=-||+.-.-+....+.|+. .| .+|.+++|...
T Consensus 3 ~i~ill~~g~~~~e~~~~~~~l~~a~~-~~v~~vs~~~~ 40 (188)
T 2fex_A 3 RIAIALAQDFADWEPALLAAAARSYLG-VEIVHATPDGM 40 (188)
T ss_dssp EEEEECCTTBCTTSSHHHHHHHHHHSC-CEEEEEETTSS
T ss_pred EEEEEeCCCchHHHHHHHHHHHhhcCC-ceEEEEeCCCC
Confidence 444444478888778888999988 78 59999999864
No 75
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=22.73 E-value=1.5e+02 Score=23.05 Aligned_cols=37 Identities=16% Similarity=0.082 Sum_probs=22.9
Q ss_pred CCcEEEecCCCCCcccccccchhhHHHHHHHHHcCCCEEEEEee
Q 021782 102 VPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYD 145 (307)
Q Consensus 102 ~PDLVvSGIN~G~NlG~dv~ySGTVgAA~ea~~~GiPaIAvS~~ 145 (307)
+||+||..++....-|.++ -..+.. ...+|.|.+|..
T Consensus 71 ~~dlvilD~~l~~~~g~~l------~~~lr~-~~~~~ii~~s~~ 107 (164)
T 3t8y_A 71 KPDVITMDIEMPNLNGIEA------LKLIMK-KAPTRVIMVSSL 107 (164)
T ss_dssp CCSEEEECSSCSSSCHHHH------HHHHHH-HSCCEEEEEESS
T ss_pred CCCEEEEeCCCCCCCHHHH------HHHHHh-cCCceEEEEecC
Confidence 6999999998765444332 112222 234888888863
No 76
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=22.48 E-value=56 Score=27.07 Aligned_cols=43 Identities=19% Similarity=0.224 Sum_probs=32.0
Q ss_pred CCCCeEEEeCCCCCCCcc-HHHHHHHHHhcCCccEEEEecCCCCC
Q 021782 12 DHKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDSEKS 55 (307)
Q Consensus 12 ~~~~~ILlTNDDGi~a~G-i~aL~~aL~~~g~~~V~VVAP~~~~S 55 (307)
.+..+|||. ||.+.+=+ ++++.+.|++.|...|.+++....+.
T Consensus 93 ~~gk~VllV-DDvi~TG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~ 136 (183)
T 1hgx_A 93 IEGRHVLVV-EDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDI 136 (183)
T ss_dssp CTTSEEEEE-EEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred CCCCEEEEE-CCccCCHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 346788888 99988743 67888999999866787887654433
No 77
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=22.16 E-value=1.2e+02 Score=26.38 Aligned_cols=38 Identities=5% Similarity=0.123 Sum_probs=26.6
Q ss_pred cCCCCCCeEEEeCCCCCCC-ccH-HHHHHHHHhcCCccEEEEec
Q 021782 9 VNSDHKPTIMVTNDDGIDA-PGL-RSLVRVLVSTNRYTVQVCAP 50 (307)
Q Consensus 9 ~~~~~~~~ILlTNDDGi~a-~Gi-~aL~~aL~~~g~~~V~VVAP 50 (307)
|...+...|||| |-.+ -|| +++++.|.+.| ++|+++.-
T Consensus 16 m~~l~~k~vlVT---Gas~~~gIG~~ia~~l~~~G-~~V~~~~r 55 (285)
T 2p91_A 16 MGLLEGKRALIT---GVANERSIAYGIAKSFHREG-AQLAFTYA 55 (285)
T ss_dssp -CTTTTCEEEEC---CCSSTTSHHHHHHHHHHHTT-CEEEEEES
T ss_pred hhccCCCEEEEE---CCCCCCcHHHHHHHHHHHcC-CEEEEEeC
Confidence 333445679999 4332 577 78999999999 78888764
No 78
>3o4v_A MTA/SAH nucleosidase; mixed alpha/beta dimer, hydrolase; HET: 4CT; 1.75A {Escherichia coli} SCOP: c.56.2.1 PDB: 1jys_A* 1nc1_A* 1nc3_A* 1y6q_A* 1y6r_A* 1z5p_A* 3df9_A* 1z5n_A* 1z5o_A* 4g89_A*
Probab=22.06 E-value=1.5e+02 Score=25.15 Aligned_cols=50 Identities=14% Similarity=0.125 Sum_probs=29.2
Q ss_pred hHHHHHHHHHcCCCEEEEEeecCC-CCCCCCcc----HHHHHHHHHHHHHHHHHH
Q 021782 125 TVAGAREAFFHGVPSVSISYDWVG-GKSNVNDY----TLAAEACLPIINAILAEI 174 (307)
Q Consensus 125 TVgAA~ea~~~GiPaIAvS~~~~~-~~~~~~~~----~~aa~~~~~li~~l~~~~ 174 (307)
+.+-|.-|..+|+|.+++..-.+. +.....+| +.|++.+.+++.++++.+
T Consensus 177 ~aa~a~va~~~~ip~~~ir~ISD~a~~~~~~~~~~~~~~aa~~~a~~v~~~l~~l 231 (234)
T 3o4v_A 177 ATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSSLMVESLVQKL 231 (234)
T ss_dssp HHHHHHHHHHHTCCEEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEEEecCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445555666799999999853211 11112233 446666677777776554
No 79
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=21.96 E-value=56 Score=28.31 Aligned_cols=42 Identities=7% Similarity=0.216 Sum_probs=31.9
Q ss_pred CCCeEEEeCCCCCCCcc-HHHHHHHHHhcCCccEEEEecCCCCC
Q 021782 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDSEKS 55 (307)
Q Consensus 13 ~~~~ILlTNDDGi~a~G-i~aL~~aL~~~g~~~V~VVAP~~~~S 55 (307)
+..+|||. ||.+.+=+ ++++.+.|++.|..+|.++++..-++
T Consensus 133 ~Gk~VllV-DDii~TG~Tl~~a~~~L~~~ga~~V~va~l~~k~~ 175 (225)
T 2jbh_A 133 AGKNVLIV-EDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRT 175 (225)
T ss_dssp TTSEEEEE-EEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred CCCEEEEE-ccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 46788888 99998743 67888999998866788887755333
No 80
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=21.70 E-value=59 Score=27.92 Aligned_cols=43 Identities=19% Similarity=0.293 Sum_probs=32.8
Q ss_pred CCCeEEEeCCCCCCCcc-HHHHHHHHHhcCCccEEEEecCCCCCc
Q 021782 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDSEKSA 56 (307)
Q Consensus 13 ~~~~ILlTNDDGi~a~G-i~aL~~aL~~~g~~~V~VVAP~~~~Sg 56 (307)
+..+|||. ||.+.+=+ ++++.+.|++.|..+|.++++..-.++
T Consensus 117 ~gk~VllV-DDvi~TG~Tl~aa~~~L~~~Ga~~V~v~~l~~k~~~ 160 (211)
T 1pzm_A 117 ENRHIMLV-EDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPSG 160 (211)
T ss_dssp TTCEEEEE-EEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGG
T ss_pred CCCEEEEE-CCccccHHHHHHHHHHHHhcCCCEEEEEEEEecCcc
Confidence 56789988 99988733 688999999998667888887654433
No 81
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=21.39 E-value=88 Score=27.55 Aligned_cols=31 Identities=19% Similarity=0.249 Sum_probs=26.1
Q ss_pred CCCCCccHHHHHHHHHhcCCccEEEEecCCCC
Q 021782 23 DGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEK 54 (307)
Q Consensus 23 DGi~a~Gi~aL~~aL~~~g~~~V~VVAP~~~~ 54 (307)
||+.-.=+-..++.|++.| .+|.+++|...+
T Consensus 37 dG~e~~E~~~p~~vL~~aG-~~V~~~S~~~g~ 67 (242)
T 3l3b_A 37 DGSEIREAVLVMLELDRHN-VNFKCFAPNKNQ 67 (242)
T ss_dssp TSCCHHHHHHHHHHHHHTT-CEEEEEECSSBC
T ss_pred CCeeHHHHHHHHHHHHHCC-CEEEEEecCCCc
Confidence 6777777888899999999 699999998654
No 82
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=21.36 E-value=81 Score=23.63 Aligned_cols=33 Identities=21% Similarity=0.314 Sum_probs=24.5
Q ss_pred CCeEEEeCCCCCCCccHHHHHHHHHhcCCccEEEEecC
Q 021782 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPD 51 (307)
Q Consensus 14 ~~~ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~VVAP~ 51 (307)
.|+|+|+ |...-|.. +++.|.+.| ++|+++.+.
T Consensus 4 ~m~i~Ii---G~G~iG~~-~a~~L~~~g-~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIA---GIGRVGYT-LAKSLSEKG-HDIVLIDID 36 (140)
T ss_dssp -CEEEEE---CCSHHHHH-HHHHHHHTT-CEEEEEESC
T ss_pred CCEEEEE---CCCHHHHH-HHHHHHhCC-CeEEEEECC
Confidence 5889999 76555654 777888888 799998654
No 83
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=21.25 E-value=60 Score=27.50 Aligned_cols=44 Identities=16% Similarity=0.249 Sum_probs=33.1
Q ss_pred CCCCeEEEeCCCCCCCcc-HHHHHHHHHhcCCccEEEEecCCCCCc
Q 021782 12 DHKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDSEKSA 56 (307)
Q Consensus 12 ~~~~~ILlTNDDGi~a~G-i~aL~~aL~~~g~~~V~VVAP~~~~Sg 56 (307)
.+..+|||. ||.+.+=+ +++.++.|++.|..+|.++++..-.++
T Consensus 116 ~~gk~VllV-DDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~ 160 (205)
T 1yfz_A 116 IEGKDVLIV-EDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPER 160 (205)
T ss_dssp CTTSEEEEE-EEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGG
T ss_pred CCcCEEEEE-CCccCcHHHHHHHHHHHHhcCCCEEEEEEEEecCcc
Confidence 345689998 99888743 678889999998778888887754443
No 84
>2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi}
Probab=21.15 E-value=58 Score=28.61 Aligned_cols=35 Identities=11% Similarity=0.023 Sum_probs=28.7
Q ss_pred CCCCeEEEeCCCCCCCccHHHHHHHHHhcCCccEEE
Q 021782 12 DHKPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQV 47 (307)
Q Consensus 12 ~~~~~ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~V 47 (307)
..+..|.||=|||..+.+...+.+.|++.|. ..+.
T Consensus 23 ~~~k~VaLTFDDG~~~~~t~~il~iL~~~~v-~ATF 57 (254)
T 2vyo_A 23 TNSGMIAINFVDGPVRGVTDRILNTLDELGV-KATF 57 (254)
T ss_dssp SSSSEEEEEEESCCCTTHHHHHHHHHHHHTC-CCEE
T ss_pred CCCCEEEEEEeCCCCcccHHHHHHHHHHcCC-CEEE
Confidence 4456699999999998899999999999884 4555
No 85
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=21.13 E-value=85 Score=24.60 Aligned_cols=33 Identities=18% Similarity=0.107 Sum_probs=25.6
Q ss_pred CCeEEEeCCCCCCCccHHHHHHHHHhcCCccEEEEecC
Q 021782 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPD 51 (307)
Q Consensus 14 ~~~ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~VVAP~ 51 (307)
..+|+|. |...-| +.+++.|.+.| ++|+++.++
T Consensus 3 ~~~vlI~---G~G~vG-~~la~~L~~~g-~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVC---GHSILA-INTILQLNQRG-QNVTVISNL 35 (153)
T ss_dssp CSCEEEE---CCSHHH-HHHHHHHHHTT-CCEEEEECC
T ss_pred CCcEEEE---CCCHHH-HHHHHHHHHCC-CCEEEEECC
Confidence 4568888 766566 56888898888 799999875
No 86
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=21.00 E-value=1.1e+02 Score=24.97 Aligned_cols=31 Identities=16% Similarity=0.086 Sum_probs=22.0
Q ss_pred CeEEEeCCCCCCCccH-HHHHHHHHhcCCccEEEEec
Q 021782 15 PTIMVTNDDGIDAPGL-RSLVRVLVSTNRYTVQVCAP 50 (307)
Q Consensus 15 ~~ILlTNDDGi~a~Gi-~aL~~aL~~~g~~~V~VVAP 50 (307)
|+||||==-| +| ++|++.|.+.| ++|+++.-
T Consensus 1 MkilVtGatG----~iG~~l~~~L~~~g-~~V~~~~R 32 (224)
T 3h2s_A 1 MKIAVLGATG----RAGSAIVAEARRRG-HEVLAVVR 32 (224)
T ss_dssp CEEEEETTTS----HHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEEcCCC----HHHHHHHHHHHHCC-CEEEEEEe
Confidence 6799983222 22 67888888888 79988864
No 87
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=20.89 E-value=1.7e+02 Score=24.12 Aligned_cols=38 Identities=16% Similarity=0.120 Sum_probs=30.1
Q ss_pred CeEEEeCCCCCCCccHHHHHHHHHhcCCccEEEEecCCC
Q 021782 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSE 53 (307)
Q Consensus 15 ~~ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~VVAP~~~ 53 (307)
++|++-=-||+....+...++.|+..| .+|.+++|...
T Consensus 4 ~~v~ill~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~~ 41 (197)
T 2rk3_A 4 KRALVILAKGAEEMETVIPVDVMRRAG-IKVTVAGLAGK 41 (197)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTT-CEEEEEETTCS
T ss_pred CEEEEEECCCCcHHHHHHHHHHHHHCC-CEEEEEEcCCC
Confidence 344433348999999999999999999 59999999754
No 88
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=20.83 E-value=1.4e+02 Score=25.61 Aligned_cols=35 Identities=11% Similarity=0.178 Sum_probs=25.6
Q ss_pred CCCCeEEEeCCCCCCC-ccH-HHHHHHHHhcCCccEEEEec
Q 021782 12 DHKPTIMVTNDDGIDA-PGL-RSLVRVLVSTNRYTVQVCAP 50 (307)
Q Consensus 12 ~~~~~ILlTNDDGi~a-~Gi-~aL~~aL~~~g~~~V~VVAP 50 (307)
.+..+|||| |-.+ -|| +++++.|.+.| ++|+++.-
T Consensus 7 l~~k~vlVT---Gas~~~gIG~~ia~~l~~~G-~~V~~~~r 43 (265)
T 1qsg_A 7 LSGKRILVT---GVASKLSIAYGIAQAMHREG-AELAFTYQ 43 (265)
T ss_dssp TTTCEEEEC---CCCSTTSHHHHHHHHHHHTT-CEEEEEES
T ss_pred cCCCEEEEE---CCCCCCCHHHHHHHHHHHCC-CEEEEEcC
Confidence 345679999 4331 567 78999999999 78888764
No 89
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=20.65 E-value=45 Score=29.57 Aligned_cols=19 Identities=42% Similarity=0.461 Sum_probs=16.1
Q ss_pred chhhHHHHHHHHHcCCCEEEE
Q 021782 122 YSGTVAGAREAFFHGVPSVSI 142 (307)
Q Consensus 122 ySGTVgAA~ea~~~GiPaIAv 142 (307)
-||++ .+||+.+|+|.|+.
T Consensus 289 ~sg~~--~lEA~a~G~Pvi~~ 307 (375)
T 3beo_A 289 DSGGV--QEEAPSLGVPVLVL 307 (375)
T ss_dssp CCHHH--HHHHHHHTCCEEEC
T ss_pred CCCCh--HHHHHhcCCCEEEe
Confidence 35666 88999999999987
No 90
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=20.56 E-value=1.4e+02 Score=26.29 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=23.0
Q ss_pred CCCeEEEeCCCCCCCccHHHHHHHHHhc-CCccEEEEecC
Q 021782 13 HKPTIMVTNDDGIDAPGLRSLVRVLVST-NRYTVQVCAPD 51 (307)
Q Consensus 13 ~~~~ILlTNDDGi~a~Gi~aL~~aL~~~-g~~~V~VVAP~ 51 (307)
++|+|||++-.+. ..|+++|++. |.++|+++-+.
T Consensus 3 ~~~~Ili~g~g~~-----~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 3 QKPHLLITSAGRR-----AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TCCEEEEESCTTC-----HHHHHHHHHHCCSSEEEEEESC
T ss_pred ccceEEEecCCch-----HHHHHHHHHhcCCCEEEEEeCC
Confidence 4689999965443 4688888876 32477777554
No 91
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=20.46 E-value=1.3e+02 Score=24.88 Aligned_cols=31 Identities=26% Similarity=0.427 Sum_probs=23.9
Q ss_pred CeEEEeCCCCCCCccHHHHHHHHHhcCCccEEEEe
Q 021782 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCA 49 (307)
Q Consensus 15 ~~ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~VVA 49 (307)
|+|+|. |.| ..+...+.++|++.| .++.++-
T Consensus 3 ~~I~ii-d~~--~~~~~~~~~~l~~~G-~~~~~~~ 33 (200)
T 1ka9_H 3 MKALLI-DYG--SGNLRSAAKALEAAG-FSVAVAQ 33 (200)
T ss_dssp CEEEEE-CSS--CSCHHHHHHHHHHTT-CEEEEES
T ss_pred cEEEEE-eCC--CccHHHHHHHHHHCC-CeEEEec
Confidence 789998 554 456677899999998 5887774
No 92
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=20.46 E-value=1.5e+02 Score=25.49 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=26.8
Q ss_pred CCCCeEEEeCCCCCC-CccH-HHHHHHHHhcCCccEEEEec
Q 021782 12 DHKPTIMVTNDDGID-APGL-RSLVRVLVSTNRYTVQVCAP 50 (307)
Q Consensus 12 ~~~~~ILlTNDDGi~-a~Gi-~aL~~aL~~~g~~~V~VVAP 50 (307)
-+...+||| |-. +.|| +++++.|.+.| ++|+++.-
T Consensus 4 l~gK~alVT---Gaa~~~GIG~aiA~~la~~G-a~Vvi~~r 40 (256)
T 4fs3_A 4 LENKTYVIM---GIANKRSIAFGVAKVLDQLG-AKLVFTYR 40 (256)
T ss_dssp CTTCEEEEE---CCCSTTCHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCCEEEEE---CCCCCchHHHHHHHHHHHCC-CEEEEEEC
Confidence 346678999 443 3578 78999999999 79998864
No 93
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=20.41 E-value=1.4e+02 Score=25.92 Aligned_cols=84 Identities=6% Similarity=-0.001 Sum_probs=46.2
Q ss_pred cCCCCCCeEEEeCCCCCCCccH-HHHHHHHHhcCCccEEEEecCCCCCcCcccccCCCCeeeeec--cCCCCeeEEecCC
Q 021782 9 VNSDHKPTIMVTNDDGIDAPGL-RSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPA--DFDGVTAYAVSGT 85 (307)
Q Consensus 9 ~~~~~~~~ILlTNDDGi~a~Gi-~aL~~aL~~~g~~~V~VVAP~~~~Sg~g~siT~~~pl~v~~~--~~~g~~~~~v~GT 85 (307)
|...+...||||==-| ..|| +++++.|.+.| ++|+++.-...+. ..+++ +......+.+|=+
T Consensus 21 M~~l~~k~vlVTGasg--~~GIG~~ia~~l~~~G-~~V~~~~r~~~~~------------~~~~l~~~~~~~~~~~~Dl~ 85 (280)
T 3nrc_A 21 MGFLAGKKILITGLLS--NKSIAYGIAKAMHREG-AELAFTYVGQFKD------------RVEKLCAEFNPAAVLPCDVI 85 (280)
T ss_dssp -CTTTTCEEEECCCCS--TTCHHHHHHHHHHHTT-CEEEEEECTTCHH------------HHHHHHGGGCCSEEEECCTT
T ss_pred ccccCCCEEEEECCCC--CCCHHHHHHHHHHHcC-CEEEEeeCchHHH------------HHHHHHHhcCCceEEEeecC
Confidence 4445567899994211 1456 67899999999 6888876543000 00111 0112234566655
Q ss_pred hHHHHHHhhhccC--CCCCCcEEEe
Q 021782 86 PADCASLGVSQAL--FPSVPDLVIS 108 (307)
Q Consensus 86 PaDcV~~al~~~l--~~~~PDLVvS 108 (307)
=.+.+.-.+..+. + .++|+||.
T Consensus 86 ~~~~v~~~~~~~~~~~-g~id~li~ 109 (280)
T 3nrc_A 86 SDQEIKDLFVELGKVW-DGLDAIVH 109 (280)
T ss_dssp CHHHHHHHHHHHHHHC-SSCCEEEE
T ss_pred CHHHHHHHHHHHHHHc-CCCCEEEE
Confidence 4555555554321 2 37999995
No 94
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=20.31 E-value=76 Score=27.06 Aligned_cols=24 Identities=25% Similarity=0.231 Sum_probs=18.2
Q ss_pred hhhHHHHHHHHHcCCCEEEEEeec
Q 021782 123 SGTVAGAREAFFHGVPSVSISYDW 146 (307)
Q Consensus 123 SGTVgAA~ea~~~GiPaIAvS~~~ 146 (307)
.||=|..+..+..|||++.++...
T Consensus 295 ggTDa~~~~~~~~Giptv~~G~g~ 318 (354)
T 2wzn_A 295 TGTDANVMQINKEGVATAVLSIPI 318 (354)
T ss_dssp CSSHHHHHHTSTTCCEEEEEEEEE
T ss_pred cccHHHHHHHhcCCCCEEEECccc
Confidence 467666666667899999999753
No 95
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=20.22 E-value=1.6e+02 Score=24.49 Aligned_cols=37 Identities=16% Similarity=0.223 Sum_probs=29.6
Q ss_pred eEEEeCCCCCCCccHHHHHHHHHhcCCccEEEEecCCC
Q 021782 16 TIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSE 53 (307)
Q Consensus 16 ~ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~VVAP~~~ 53 (307)
+|++-=-||+....+...++.|+..| .+|.+++|...
T Consensus 4 kV~ill~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~~ 40 (205)
T 2ab0_A 4 SALVCLAPGSEETEAVTTIDLLVRGG-IKVTTASVASD 40 (205)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHTT-CEEEEEECSST
T ss_pred EEEEEEcCCCcHHHHHHHHHHHHHCC-CEEEEEeCCCC
Confidence 44443347898888999999999999 59999999865
No 96
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=20.09 E-value=43 Score=31.24 Aligned_cols=62 Identities=16% Similarity=0.212 Sum_probs=0.0
Q ss_pred CccccccccCCCCCCeEEEeCCCCCCCccHHHHHHHHHhcCCccEEEEecCCCC------------------CcCccccc
Q 021782 1 MERRGIAIVNSDHKPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEK------------------SAVSHSIT 62 (307)
Q Consensus 1 ~~~~~~~~~~~~~~~~ILlTNDDGi~a~Gi~aL~~aL~~~g~~~V~VVAP~~~~------------------Sg~g~siT 62 (307)
+++++- |..+++.-||+. ||+...-+...++.|++.| .+|.+++|.... +..|+.++
T Consensus 3 ~~~~~~--m~~~~kv~ill~--dg~e~~E~~~~~~~l~~ag-~~v~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~ 77 (396)
T 3uk7_A 3 QMGRGS--MANSRTVLILCG--DYMEDYEVMVPFQALQAFG-ITVHTVCPGKKAGDSCPTAVHDFCGHQTYFESRGHNFT 77 (396)
T ss_dssp ----------CCCEEEEECC--TTEEHHHHHHHHHHHHHTT-CEEEEECTTCCTTCEECEEEEECSSSSSCEEEECCCEE
T ss_pred chhhhh--hhcCCeEEEEeC--CCccHHHHHHHHHHHHHCC-CEEEEEcCCCcCCCcccccccccccchhhhhccCceee
Q ss_pred CCCCe
Q 021782 63 WRHPI 67 (307)
Q Consensus 63 ~~~pl 67 (307)
...++
T Consensus 78 ~~~~~ 82 (396)
T 3uk7_A 78 LNATF 82 (396)
T ss_dssp CCSCG
T ss_pred ccCCh
No 97
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=20.02 E-value=2.2e+02 Score=23.90 Aligned_cols=37 Identities=11% Similarity=0.016 Sum_probs=29.5
Q ss_pred eEEEeCCCCCCCccHHHHHHHHH--------hcCCccEEEEecCCC
Q 021782 16 TIMVTNDDGIDAPGLRSLVRVLV--------STNRYTVQVCAPDSE 53 (307)
Q Consensus 16 ~ILlTNDDGi~a~Gi~aL~~aL~--------~~g~~~V~VVAP~~~ 53 (307)
+|++-=-||+..--+....+.|+ +.+ .+|.+|+|...
T Consensus 7 ~v~ill~~g~~~~e~~~~~~~l~~a~~~~~~~~~-~~v~~vs~~~~ 51 (212)
T 3efe_A 7 KAFLYVFNTMSDWEYGYLIAELNSGRYFKKDLAP-LKVITVGANKE 51 (212)
T ss_dssp CEEEEECTTCCTTTTHHHHHHHHHCTTSCTTCCC-CCEEEEESSSC
T ss_pred EEEEEECCCccHHHHHHHHHHHHhhhccccCCCC-eEEEEEECCCC
Confidence 46555567999989999999998 566 59999999754
Done!